Prediction of potential genes in microbial genomes Time: Tue Jun 28 19:34:44 2011 Seq name: gi|222441572|gb|ABXX02000001.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont0.1, whole genome shotgun sequence Length of sequence - 615913 bp Number of predicted genes - 537, with homology - 508 Number of transcription units - 295, operones - 122 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 56 - 742 771 ## BAD_0564 hypothetical protein - Prom 771 - 830 2.5 2 2 Op 1 . + CDS 911 - 1621 482 ## COG0692 Uracil DNA glycosylase 3 2 Op 2 . + CDS 1691 - 2707 1065 ## COG0714 MoxR-like ATPases 4 2 Op 3 . + CDS 2704 - 3657 587 ## BAD_0561 hypothetical protein 5 2 Op 4 . + CDS 3654 - 4181 309 ## BAD_0560 hypothetical protein 6 2 Op 5 . + CDS 4182 - 5249 741 ## BDP_0766 von Willebrand factor, type A 7 2 Op 6 . + CDS 5180 - 6265 740 ## BDP_0765 von Willebrand factor, type A 8 2 Op 7 . + CDS 6262 - 6828 569 ## BAD_0557 cell surface elastin binding protein EbpS + Term 6858 - 6920 5.5 9 3 Op 1 . + CDS 6965 - 7306 146 ## BAD_0556 hypothetical protein 10 3 Op 2 . + CDS 7303 - 8784 1080 ## BDP_0761 esterase/lipase 11 3 Op 3 . + CDS 8901 - 10343 1972 ## COG0015 Adenylosuccinate lyase + Term 10374 - 10432 20.8 + Prom 10372 - 10431 1.7 12 4 Tu 1 . + CDS 10486 - 12921 2182 ## COG0392 Predicted integral membrane protein 13 5 Tu 1 . - CDS 12855 - 12992 66 ## + Prom 12935 - 12994 5.5 14 6 Tu 1 . + CDS 13075 - 13356 507 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 13390 - 13424 6.6 + Prom 13406 - 13465 2.7 15 7 Op 1 . + CDS 13503 - 13862 332 ## BAD_0551 MarR-type transcriptional regulator 16 7 Op 2 . + CDS 13859 - 14659 749 ## BAD_0550 hypothetical protein + Term 14726 - 14790 6.6 - Term 14710 - 14776 21.6 17 8 Op 1 . - CDS 14800 - 16266 1058 ## BAD_0549 proteasome-associated protein 18 8 Op 2 . - CDS 16266 - 16457 325 ## gi|225350748|ref|ZP_03741771.1| hypothetical protein BIFPSEUDO_02317 - Term 16487 - 16536 15.1 19 9 Op 1 . - CDS 16544 - 17374 988 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 17431 - 17490 2.2 20 9 Op 2 . - CDS 17507 - 19090 1105 ## BAD_0547 proteasome-associated protein 21 9 Op 3 . - CDS 19134 - 20678 1584 ## COG0464 ATPases of the AAA+ class - Prom 20765 - 20824 3.2 + Prom 20707 - 20766 1.6 22 10 Tu 1 . + CDS 20812 - 21486 631 ## COG0560 Phosphoserine phosphatase + Term 21554 - 21622 18.2 - Term 21548 - 21602 17.0 23 11 Op 1 . - CDS 21624 - 22586 1067 ## COG0223 Methionyl-tRNA formyltransferase 24 11 Op 2 . - CDS 22683 - 23393 1057 ## COG1011 Predicted hydrolase (HAD superfamily) 25 11 Op 3 2/0.064 - CDS 23472 - 25703 1281 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 26 11 Op 4 . - CDS 25718 - 26932 1457 ## COG0192 S-adenosylmethionine synthetase 27 12 Tu 1 . + CDS 27028 - 27189 103 ## + Term 27339 - 27403 -1.0 28 13 Tu 1 . - CDS 27109 - 27393 452 ## COG1758 DNA-directed RNA polymerase, subunit K/omega - Prom 27441 - 27500 6.8 29 14 Tu 1 . + CDS 27612 - 29465 2434 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 29483 - 29545 14.1 - Term 29549 - 29588 7.1 30 15 Op 1 . - CDS 29613 - 30200 501 ## COG0194 Guanylate kinase 31 15 Op 2 3/0.026 - CDS 30273 - 31214 887 ## COG0284 Orotidine-5'-phosphate decarboxylase 32 15 Op 3 24/0.000 - CDS 31217 - 34597 4312 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 33 15 Op 4 . - CDS 34590 - 35807 1220 ## COG0505 Carbamoylphosphate synthase small subunit - Prom 35834 - 35893 1.6 34 16 Op 1 6/0.000 - CDS 35895 - 36338 503 ## COG0781 Transcription termination factor 35 16 Op 2 . - CDS 36361 - 36924 785 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 36 16 Op 3 . - CDS 36882 - 37046 113 ## 37 16 Op 4 30/0.000 - CDS 37106 - 38305 1290 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 38360 - 38419 1.6 38 16 Op 5 51/0.000 - CDS 38475 - 40604 2961 ## COG0480 Translation elongation factors (GTPases) 39 16 Op 6 56/0.000 - CDS 40635 - 41105 782 ## PROTEIN SUPPORTED gi|224283422|ref|ZP_03646744.1| 30S ribosomal protein S7 40 16 Op 7 . - CDS 41111 - 41482 622 ## PROTEIN SUPPORTED gi|119025548|ref|YP_909393.1| 30S ribosomal protein S12 - Prom 41696 - 41755 3.5 41 17 Tu 1 . + CDS 41589 - 42062 33 ## gi|225350772|ref|ZP_03741795.1| hypothetical protein BIFPSEUDO_02341 - Term 42147 - 42194 12.1 42 18 Tu 1 . - CDS 42227 - 43267 1280 ## COG0385 Predicted Na+-dependent transporter + TRNA 43545 - 43620 74.6 # His GTG 0 0 + Prom 43547 - 43606 79.3 43 19 Tu 1 . + CDS 43729 - 44754 1362 ## COG2008 Threonine aldolase - Term 44790 - 44837 13.3 44 20 Tu 1 . - CDS 44887 - 46068 1021 ## COG0438 Glycosyltransferase 45 21 Tu 1 . + CDS 46095 - 47357 1274 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) + Prom 47385 - 47444 1.5 46 22 Op 1 2/0.064 + CDS 47494 - 48246 1104 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 48254 - 48307 12.5 47 22 Op 2 . + CDS 48355 - 52089 4625 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 52140 - 52200 15.1 - Term 52126 - 52186 12.1 48 23 Op 1 . - CDS 52210 - 52437 230 ## BDP_0722 hypothetical protein 49 23 Op 2 . - CDS 52434 - 54068 977 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 54251 - 54310 2.9 50 24 Op 1 13/0.000 + CDS 54331 - 55845 1750 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 51 24 Op 2 2/0.064 + CDS 55864 - 56898 873 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase + Term 56909 - 56947 6.0 + Prom 56915 - 56974 4.5 52 24 Op 3 . + CDS 56998 - 58260 1713 ## COG0151 Phosphoribosylamine-glycine ligase + Term 58330 - 58394 20.2 - Term 58318 - 58379 14.1 53 25 Op 1 2/0.064 - CDS 58416 - 59831 2125 ## COG0477 Permeases of the major facilitator superfamily 54 25 Op 2 . - CDS 59864 - 60805 1143 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 55 26 Op 1 . - CDS 60921 - 62084 1103 ## COG1454 Alcohol dehydrogenase, class IV 56 26 Op 2 . - CDS 62088 - 62783 855 ## COG0135 Phosphoribosylanthranilate isomerase 57 26 Op 3 2/0.064 - CDS 62837 - 63832 904 ## COG0524 Sugar kinases, ribokinase family - Prom 63900 - 63959 5.5 - Term 63960 - 63988 -1.0 58 27 Op 1 . - CDS 64026 - 65123 933 ## COG0524 Sugar kinases, ribokinase family 59 27 Op 2 . - CDS 65141 - 67216 2193 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 60 28 Op 1 . - CDS 67493 - 67972 340 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 61 28 Op 2 29/0.000 - CDS 67978 - 69147 1268 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 62 28 Op 3 . - CDS 69131 - 69628 681 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Term 69636 - 69684 -0.1 63 28 Op 4 . - CDS 69692 - 70681 1049 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Prom 70601 - 70660 2.4 64 29 Tu 1 . + CDS 70853 - 72769 1911 ## COG1154 Deoxyxylulose-5-phosphate synthase - Term 72770 - 72830 4.8 65 30 Op 1 . - CDS 72858 - 74330 1149 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 66 30 Op 2 . - CDS 74333 - 75454 1421 ## BDP_0710 S-layer domain protein 67 30 Op 3 . - CDS 75479 - 76186 219 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Prom 76258 - 76317 2.5 68 31 Tu 1 . + CDS 76511 - 76948 567 ## BAD_0509 transposase + Prom 77126 - 77185 1.6 69 32 Tu 1 . + CDS 77236 - 77463 82 ## Odosp_1516 hypothetical protein - Term 77252 - 77293 1.2 70 33 Tu 1 . - CDS 77423 - 78322 1178 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Term 78499 - 78558 15.5 71 34 Op 1 . - CDS 78578 - 78835 269 ## COG0695 Glutaredoxin and related proteins 72 34 Op 2 . - CDS 78975 - 79421 383 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 73 35 Tu 1 . + CDS 79377 - 79580 65 ## gi|212716849|ref|ZP_03324977.1| hypothetical protein BIFCAT_01792 74 36 Tu 1 . + CDS 79849 - 80055 141 ## + Term 80101 - 80140 3.9 - Term 79905 - 79951 9.0 75 37 Op 1 . - CDS 79977 - 81155 1347 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 76 37 Op 2 32/0.000 - CDS 81218 - 81877 846 ## COG2011 ABC-type metal ion transport system, permease component 77 37 Op 3 10/0.000 - CDS 81883 - 82944 1338 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 83039 - 83098 2.1 - Term 83025 - 83065 4.1 78 37 Op 4 . - CDS 83100 - 83978 1335 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 79 37 Op 5 . - CDS 84018 - 85040 1456 ## COG1893 Ketopantoate reductase - Prom 85190 - 85249 6.6 - Term 85226 - 85267 7.1 80 38 Op 1 16/0.000 - CDS 85295 - 86203 1388 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 81 38 Op 2 34/0.000 - CDS 86273 - 87121 464 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 82 38 Op 3 17/0.000 - CDS 87114 - 87788 741 ## COG0765 ABC-type amino acid transport system, permease component 83 38 Op 4 . - CDS 87775 - 88431 893 ## COG0765 ABC-type amino acid transport system, permease component 84 39 Op 1 . + CDS 88465 - 88665 129 ## 85 39 Op 2 . + CDS 88705 - 89313 680 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 89536 - 89603 31.8 + TRNA 89398 - 89469 74.3 # Val GAC 0 0 + TRNA 89515 - 89587 79.4 # Val CAC 0 0 + TRNA 89621 - 89696 84.4 # Gly GCC 0 0 - Term 89759 - 89810 11.1 86 40 Op 1 . - CDS 89825 - 91813 2109 ## COG0480 Translation elongation factors (GTPases) - TRNA 91900 - 91976 83.5 # Arg TCT 0 0 - Term 91852 - 91895 9.1 87 40 Op 2 . - CDS 92030 - 93019 1211 ## COG3238 Uncharacterized protein conserved in bacteria - Prom 93109 - 93168 2.0 - Term 93086 - 93133 7.3 88 41 Tu 1 . - CDS 93208 - 94401 1382 ## COG0471 Di- and tricarboxylate transporters - Prom 94606 - 94665 3.8 - Term 94573 - 94608 4.2 89 42 Tu 1 . - CDS 94762 - 96846 2175 ## COG0358 DNA primase (bacterial type) - Term 96852 - 96907 14.4 90 43 Tu 1 . - CDS 96952 - 98535 1695 ## COG0787 Alanine racemase + Prom 98363 - 98422 5.3 91 44 Tu 1 . + CDS 98554 - 99981 2014 ## COG0531 Amino acid transporters + Term 100049 - 100108 13.3 - Term 100043 - 100090 10.2 92 45 Op 1 . - CDS 100178 - 100714 642 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 100748 - 100780 2.4 93 45 Op 2 . - CDS 100823 - 101308 616 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 101401 - 101460 3.5 94 46 Op 1 . - CDS 101475 - 103400 1344 ## COG0514 Superfamily II DNA helicase 95 46 Op 2 1/0.090 - CDS 103427 - 106222 3265 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 106337 - 106396 2.5 96 47 Op 1 8/0.000 - CDS 106441 - 107622 1545 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 97 47 Op 2 . - CDS 107701 - 108711 549 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 108885 - 108944 2.3 - Term 109083 - 109130 10.0 98 48 Op 1 1/0.090 - CDS 109151 - 109930 273 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 99 48 Op 2 4/0.026 - CDS 109942 - 110727 362 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 100 48 Op 3 49/0.000 - CDS 110724 - 111644 855 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 101 48 Op 4 38/0.000 - CDS 111641 - 112621 992 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Term 112696 - 112770 7.6 102 48 Op 5 . - CDS 112812 - 114467 2263 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 114616 - 114675 2.8 + Prom 114564 - 114623 4.9 103 49 Op 1 . + CDS 114669 - 115952 1252 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 104 49 Op 2 . + CDS 116011 - 116781 911 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor + Term 116822 - 116881 11.2 - Term 116810 - 116869 15.0 105 50 Op 1 . - CDS 116927 - 117376 305 ## Apar_0543 hypothetical protein 106 50 Op 2 . - CDS 117373 - 118170 626 ## COG0642 Signal transduction histidine kinase + Prom 117931 - 117990 1.7 107 51 Tu 1 . + CDS 118169 - 118396 167 ## + Term 118569 - 118604 1.0 108 52 Op 1 . - CDS 118401 - 119048 597 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 109 52 Op 2 2/0.064 - CDS 119069 - 120481 1598 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 120607 - 120666 1.9 - Term 120611 - 120663 8.5 110 53 Tu 1 . - CDS 120696 - 122054 1611 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 122185 - 122244 4.6 + Prom 122201 - 122260 4.1 111 54 Tu 1 . + CDS 122333 - 123892 830 ## COG3534 Alpha-L-arabinofuranosidase - Term 123902 - 123963 19.6 112 55 Op 1 . - CDS 123991 - 126060 2456 ## COG1874 Beta-galactosidase 113 55 Op 2 38/0.000 - CDS 126100 - 127113 1277 ## COG0395 ABC-type sugar transport system, permease component 114 55 Op 3 . - CDS 127171 - 128100 1213 ## COG1175 ABC-type sugar transport systems, permease components - Prom 128177 - 128236 6.4 + Prom 128244 - 128303 3.9 115 56 Tu 1 . + CDS 128337 - 129344 868 ## COG1609 Transcriptional regulators + Term 129401 - 129452 9.0 - Term 129388 - 129439 9.0 116 57 Tu 1 . - CDS 129476 - 130768 1567 ## COG3633 Na+/serine symporter - Prom 130859 - 130918 3.8 - Term 130808 - 130863 -1.0 117 58 Op 1 . - CDS 130983 - 131735 439 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 118 58 Op 2 . - CDS 131747 - 133639 2309 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 133714 - 133773 3.1 - Term 133705 - 133762 11.0 119 59 Op 1 34/0.000 - CDS 133831 - 134625 593 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 120 59 Op 2 31/0.000 - CDS 134638 - 135621 1373 ## COG0765 ABC-type amino acid transport system, permease component 121 59 Op 3 . - CDS 135667 - 136596 1370 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 122 60 Tu 1 . + CDS 136702 - 136881 63 ## gi|225350855|ref|ZP_03741878.1| hypothetical protein BIFPSEUDO_02429 + Term 136889 - 136927 4.5 - Term 136779 - 136839 16.8 123 61 Op 1 9/0.000 - CDS 136886 - 137827 1322 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Term 137952 - 138000 12.1 124 61 Op 2 . - CDS 138071 - 139018 1224 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 139085 - 139144 2.3 - Term 139115 - 139141 0.3 125 62 Tu 1 . - CDS 139149 - 139628 666 ## COG0691 tmRNA-binding protein - Term 139675 - 139732 19.2 126 63 Op 1 . - CDS 139771 - 141159 1508 ## COG3942 Surface antigen 127 63 Op 2 28/0.000 - CDS 141259 - 142182 945 ## COG2177 Cell division protein 128 63 Op 3 4/0.026 - CDS 142182 - 143483 1574 ## COG2884 Predicted ATPase involved in cell division 129 63 Op 4 . - CDS 143533 - 144663 1556 ## COG1186 Protein chain release factor B 130 64 Tu 1 . - CDS 144847 - 144978 88 ## - Prom 145017 - 145076 2.0 131 65 Op 1 . - CDS 145107 - 145586 554 ## COG1576 Uncharacterized conserved protein 132 65 Op 2 . - CDS 145596 - 146585 1502 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase - Prom 146630 - 146689 1.9 133 66 Tu 1 . - CDS 146696 - 147988 1536 ## COG0372 Citrate synthase - Prom 148109 - 148168 2.3 - Term 148132 - 148181 1.3 134 67 Tu 1 . - CDS 148241 - 149020 1028 ## COG0024 Methionine aminopeptidase - Prom 149072 - 149131 3.2 + Prom 148883 - 148942 3.1 135 68 Tu 1 . + CDS 149174 - 151255 2584 ## COG3590 Predicted metalloendopeptidase + Term 151323 - 151373 8.1 136 69 Tu 1 . - CDS 151311 - 151847 409 ## COG0629 Single-stranded DNA-binding protein - Term 152184 - 152226 10.4 137 70 Op 1 . - CDS 152263 - 154080 2387 ## COG0442 Prolyl-tRNA synthetase 138 70 Op 2 . - CDS 154244 - 155650 1247 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 139 70 Op 3 . - CDS 155704 - 156603 907 ## COG0561 Predicted hydrolases of the HAD superfamily 140 70 Op 4 . - CDS 156652 - 157302 794 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 157355 - 157414 2.1 - Term 157494 - 157542 11.4 141 71 Op 1 . - CDS 157575 - 159119 2051 ## COG0516 IMP dehydrogenase/GMP reductase 142 71 Op 2 4/0.026 - CDS 159224 - 160384 1131 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 143 71 Op 3 . - CDS 160381 - 161043 833 ## COG0009 Putative translation factor (SUA5) 144 71 Op 4 18/0.000 - CDS 161115 - 161819 298 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 145 71 Op 5 19/0.000 - CDS 161819 - 162640 243 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 146 71 Op 6 24/0.000 - CDS 162637 - 163752 1406 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 147 71 Op 7 20/0.000 - CDS 163767 - 164693 1403 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 148 71 Op 8 . - CDS 164760 - 165956 1502 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 149 72 Op 1 32/0.000 - CDS 166135 - 167058 286 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 150 72 Op 2 10/0.000 - CDS 167068 - 168156 1276 ## COG0216 Protein chain release factor A - Term 168338 - 168375 6.0 151 72 Op 3 . - CDS 168401 - 168613 382 ## PROTEIN SUPPORTED gi|119025458|ref|YP_909303.1| 50S ribosomal protein L31 - Prom 168683 - 168742 4.0 152 73 Tu 1 . + CDS 168659 - 168784 99 ## - TRNA 168722 - 168795 83.5 # Met CAT 0 0 - Term 168803 - 168836 1.8 153 74 Tu 1 . - CDS 168847 - 170073 210 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 170148 - 170207 2.1 + Prom 170098 - 170157 4.1 154 75 Tu 1 . + CDS 170243 - 171763 1774 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 171799 - 171846 3.0 - Term 171778 - 171840 20.1 155 76 Op 1 . - CDS 171961 - 172638 680 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 172798 - 172857 2.2 156 76 Op 2 . - CDS 172933 - 174921 1220 ## BAD_0429 putative secreted protein 157 76 Op 3 1/0.090 - CDS 174984 - 176615 1681 ## COG3507 Beta-xylosidase - Term 176630 - 176673 9.0 158 77 Op 1 38/0.000 - CDS 176692 - 177585 931 ## COG0395 ABC-type sugar transport system, permease component 159 77 Op 2 35/0.000 - CDS 177585 - 178628 1182 ## COG1175 ABC-type sugar transport systems, permease components - Term 178655 - 178700 8.7 160 77 Op 3 . - CDS 178729 - 180003 1763 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 180248 - 180307 7.6 + Prom 180178 - 180237 6.9 161 78 Tu 1 . + CDS 180363 - 181379 986 ## COG1609 Transcriptional regulators 162 79 Tu 1 . - CDS 181512 - 183206 1005 ## COG3507 Beta-xylosidase 163 80 Tu 1 . + CDS 183187 - 183435 69 ## + Term 183661 - 183692 -0.1 - Term 183351 - 183400 12.1 164 81 Tu 1 . - CDS 183480 - 184826 1888 ## COG2115 Xylose isomerase - Prom 184900 - 184959 4.1 + Prom 184761 - 184820 3.4 165 82 Tu 1 . + CDS 185044 - 186324 1360 ## COG2873 O-acetylhomoserine sulfhydrylase 166 83 Tu 1 . + CDS 186539 - 188008 1234 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 167 84 Tu 1 . - CDS 187956 - 188618 872 ## COG2364 Predicted membrane protein + Prom 188704 - 188763 1.6 168 85 Op 1 3/0.026 + CDS 188932 - 189672 490 ## COG3238 Uncharacterized protein conserved in bacteria 169 85 Op 2 . + CDS 189545 - 189853 313 ## COG3238 Uncharacterized protein conserved in bacteria - TRNA 189816 - 189886 48.0 # Pseudo CAT 0 0 170 86 Tu 1 . - CDS 189990 - 190412 482 ## COG4721 Predicted membrane protein 171 87 Tu 1 . + CDS 190131 - 190703 120 ## 172 88 Tu 1 . - CDS 190913 - 192139 201 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 192201 - 192260 3.2 + Prom 192204 - 192263 4.7 173 89 Op 1 . + CDS 192322 - 193851 1736 ## COG1070 Sugar (pentulose and hexulose) kinases 174 89 Op 2 . + CDS 193930 - 194826 848 ## bpr_I0724 inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1) - Term 195201 - 195236 -1.0 175 90 Tu 1 . - CDS 195406 - 196509 1183 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Term 196733 - 196786 7.1 176 91 Op 1 . - CDS 196809 - 198677 970 ## BLJ_1600 hypothetical protein 177 91 Op 2 . - CDS 198706 - 199839 1490 ## COG3405 Endoglucanase Y 178 91 Op 3 . - CDS 199844 - 201931 612 ## gi|225350918|ref|ZP_03741941.1| hypothetical protein BIFPSEUDO_02493 179 92 Op 1 . - CDS 202065 - 203696 1623 ## COG3507 Beta-xylosidase 180 92 Op 2 . - CDS 203701 - 205695 1389 ## BAD_0299 putative outer membrane protein 181 93 Op 1 38/0.000 - CDS 205809 - 206675 944 ## COG0395 ABC-type sugar transport system, permease component 182 93 Op 2 35/0.000 - CDS 206675 - 207628 883 ## COG1175 ABC-type sugar transport systems, permease components 183 93 Op 3 . - CDS 207648 - 208955 1662 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 209119 - 209178 5.4 - Term 209035 - 209070 1.5 184 94 Tu 1 . - CDS 209187 - 210242 554 ## COG0117 Pyrimidine deaminase + Prom 210321 - 210380 1.8 185 95 Tu 1 . + CDS 210413 - 211336 630 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 186 96 Tu 1 . + CDS 211495 - 213171 2187 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 213176 - 213220 4.7 187 97 Tu 1 . + CDS 213604 - 214518 914 ## COG1946 Acyl-CoA thioesterase + Term 214559 - 214601 11.1 188 98 Op 1 . - CDS 214524 - 215075 415 ## BDP_0553 hypothetical protein 189 98 Op 2 5/0.026 - CDS 215072 - 216595 1379 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 190 98 Op 3 4/0.026 - CDS 216691 - 217569 1009 ## COG0294 Dihydropteroate synthase and related enzymes 191 98 Op 4 4/0.026 - CDS 217633 - 218271 637 ## COG0302 GTP cyclohydrolase I 192 98 Op 5 11/0.000 - CDS 218271 - 220373 1197 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 193 98 Op 6 10/0.000 - CDS 220370 - 220942 495 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 194 98 Op 7 2/0.064 - CDS 220920 - 222014 296 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 195 98 Op 8 . - CDS 222019 - 223464 1275 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 196 98 Op 9 . - CDS 223545 - 224768 1393 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 197 98 Op 10 . - CDS 224768 - 226306 1593 ## COG0628 Predicted permease - Prom 226342 - 226401 1.9 198 99 Tu 1 . + CDS 226361 - 227284 1148 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 227366 - 227414 13.2 - Term 227352 - 227402 5.1 199 100 Tu 1 . - CDS 227491 - 228642 1671 ## COG1454 Alcohol dehydrogenase, class IV - Prom 228706 - 228765 2.3 200 101 Op 1 . - CDS 228828 - 231065 1813 ## COG2200 FOG: EAL domain 201 101 Op 2 . - CDS 231058 - 231723 784 ## BLJ_1526 hypothetical protein 202 101 Op 3 . - CDS 231813 - 232637 963 ## Blon_0632 hypothetical protein 203 101 Op 4 . - CDS 232627 - 234441 1808 ## BLJ_1528 membrane lipoprotein lipid attachment site 204 101 Op 5 4/0.026 - CDS 234438 - 235925 1529 ## COG4267 Predicted membrane protein 205 101 Op 6 1/0.090 - CDS 235984 - 237420 1351 ## COG0438 Glycosyltransferase 206 101 Op 7 . - CDS 237417 - 239297 1599 ## COG4878 Uncharacterized protein conserved in bacteria 207 101 Op 8 . - CDS 239294 - 240187 849 ## BLJ_1532 membrane protein 208 101 Op 9 . - CDS 240205 - 242361 1540 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 242534 - 242593 1.9 - TRNA 242684 - 242759 80.0 # Phe GAA 0 0 - TRNA 242781 - 242854 81.7 # Asp GTC 0 0 - TRNA 242880 - 242951 53.7 # Glu TTC 0 0 - Term 243059 - 243104 -0.2 209 102 Tu 1 . - CDS 243119 - 244012 925 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 244064 - 244123 3.6 + Prom 244026 - 244085 4.5 210 103 Tu 1 . + CDS 244187 - 245197 1361 ## COG1087 UDP-glucose 4-epimerase + Term 245247 - 245312 22.3 + TRNA 245447 - 245520 81.7 # Asp GTC 0 0 - Term 245626 - 245668 8.3 211 104 Op 1 . - CDS 245692 - 246189 547 ## COG0394 Protein-tyrosine-phosphatase 212 104 Op 2 16/0.000 - CDS 246194 - 246859 760 ## COG0262 Dihydrofolate reductase 213 104 Op 3 . - CDS 246917 - 247828 817 ## COG0207 Thymidylate synthase - Prom 247855 - 247914 2.0 214 105 Tu 1 . + CDS 247956 - 248369 582 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 248394 - 248441 13.3 - Term 248382 - 248429 9.5 215 106 Tu 1 . - CDS 248452 - 249486 1294 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 249584 - 249643 3.5 - Term 249586 - 249623 6.2 216 107 Tu 1 . - CDS 249650 - 250387 608 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 250424 - 250483 2.0 217 108 Tu 1 . - CDS 250527 - 251468 727 ## COG3942 Surface antigen 218 109 Op 1 . + CDS 251651 - 252793 1099 ## COG1932 Phosphoserine aminotransferase 219 109 Op 2 . + CDS 252815 - 253069 293 ## BAD_0382 hypothetical protein + Term 253106 - 253158 14.2 - Term 253095 - 253144 12.3 220 110 Tu 1 . - CDS 253193 - 254374 1356 ## COG0642 Signal transduction histidine kinase + Prom 254477 - 254536 3.6 221 111 Tu 1 . + CDS 254568 - 255248 1028 ## COG0704 Phosphate uptake regulator + Term 255285 - 255335 12.1 + Prom 255386 - 255445 3.6 222 112 Tu 1 . + CDS 255491 - 257350 2153 ## COG4716 Myosin-crossreactive antigen + Term 257449 - 257491 8.1 - Term 257436 - 257479 12.1 223 113 Op 1 . - CDS 257538 - 258278 965 ## COG0588 Phosphoglycerate mutase 1 224 113 Op 2 . - CDS 258431 - 259531 512 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase - Prom 259636 - 259695 2.6 - Term 259819 - 259871 1.0 225 114 Tu 1 . - CDS 259928 - 260728 666 ## COG1073 Hydrolases of the alpha/beta superfamily 226 115 Tu 1 . - CDS 260835 - 262190 1455 ## COG2211 Na+/melibiose symporter and related transporters - Prom 262395 - 262454 5.1 + Prom 262379 - 262438 2.7 227 116 Tu 1 . + CDS 262499 - 263548 514 ## COG1609 Transcriptional regulators + Term 263611 - 263662 7.2 - Term 263560 - 263603 5.1 228 117 Tu 1 . - CDS 263743 - 265419 2334 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 265533 - 265592 79.0 + TRNA 265515 - 265591 80.2 # Pro CGG 0 0 + Prom 265518 - 265577 79.6 229 118 Op 1 . + CDS 265755 - 266942 1263 ## COG2814 Arabinose efflux permease + Term 266979 - 267038 20.6 + Prom 266949 - 267008 2.5 230 118 Op 2 . + CDS 267130 - 269247 1749 ## COG0457 FOG: TPR repeat 231 118 Op 3 . + CDS 269318 - 269965 421 ## BBIF_1438 hypothetical protein + Term 270077 - 270129 1.2 - Term 269956 - 269987 0.1 232 119 Op 1 . - CDS 270179 - 270754 527 ## BDP_0502 hypothetical protein 233 119 Op 2 . - CDS 270757 - 272709 1219 ## BDP_0501 hypothetical protein - Prom 272767 - 272826 2.0 234 120 Op 1 19/0.000 + CDS 272823 - 274439 1141 ## COG4585 Signal transduction histidine kinase 235 120 Op 2 . + CDS 274436 - 275122 707 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 275051 - 275081 -0.9 236 121 Op 1 1/0.090 - CDS 275140 - 275922 741 ## COG2188 Transcriptional regulators 237 121 Op 2 1/0.090 - CDS 275956 - 277320 1565 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 277432 - 277491 1.6 - Term 277454 - 277491 4.0 238 122 Tu 1 1/0.090 - CDS 277545 - 279038 2074 ## COG0531 Amino acid transporters - Prom 279113 - 279172 1.8 239 123 Tu 1 . - CDS 279226 - 280296 1177 ## COG2334 Putative homoserine kinase type II (protein kinase fold) - Prom 280375 - 280434 1.5 - Term 280512 - 280558 15.0 240 124 Op 1 . - CDS 280576 - 281136 600 ## COG1335 Amidases related to nicotinamidase 241 124 Op 2 . - CDS 281173 - 282624 1824 ## COG1457 Purine-cytosine permease and related proteins - Term 282701 - 282737 1.5 242 125 Op 1 5/0.026 - CDS 282740 - 283741 400 ## COG0524 Sugar kinases, ribokinase family 243 125 Op 2 . - CDS 283795 - 284811 639 ## COG1397 ADP-ribosylglycohydrolase - TRNA 285251 - 285338 57.0 # Ser TGA 0 0 - Term 285583 - 285627 1.1 244 126 Tu 1 . - CDS 285661 - 287616 1974 ## COG0172 Seryl-tRNA synthetase + Prom 286974 - 287033 2.7 245 127 Tu 1 . + CDS 287083 - 288189 1144 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 288386 - 288421 0.1 246 128 Op 1 7/0.000 - CDS 288244 - 289110 713 ## COG3711 Transcriptional antiterminator 247 128 Op 2 . - CDS 289138 - 291228 2456 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 291377 - 291436 2.1 + Prom 291451 - 291510 4.6 248 129 Tu 1 . + CDS 291551 - 293227 2297 ## COG0033 Phosphoglucomutase + Term 293286 - 293322 3.9 249 130 Op 1 9/0.000 + CDS 293497 - 294303 773 ## COG3279 Response regulator of the LytR/AlgR family 250 130 Op 2 . + CDS 294306 - 295661 1100 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 251 130 Op 3 . + CDS 295743 - 296975 962 ## COG0328 Ribonuclease HI 252 130 Op 4 . + CDS 297144 - 297842 1134 ## COG0120 Ribose 5-phosphate isomerase + Term 297905 - 297950 12.0 - Term 297991 - 298031 6.5 253 131 Op 1 . - CDS 298067 - 298156 148 ## - Prom 298199 - 298258 2.9 - Term 298278 - 298313 -1.0 254 131 Op 2 . - CDS 298370 - 298999 859 ## BAD_0359 hypothetical protein - Prom 299097 - 299156 3.0 + Prom 298959 - 299018 3.6 255 132 Tu 1 . + CDS 299127 - 300545 1221 ## COG1066 Predicted ATP-dependent serine protease + Term 300618 - 300672 19.0 - Term 300461 - 300497 -0.8 256 133 Op 1 12/0.000 - CDS 300745 - 301971 1245 ## COG0196 FAD synthase 257 133 Op 2 26/0.000 - CDS 302020 - 303084 863 ## COG0130 Pseudouridine synthase 258 133 Op 3 32/0.000 - CDS 303068 - 303571 714 ## COG0858 Ribosome-binding factor A 259 133 Op 4 20/0.000 - CDS 303707 - 306547 3201 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 260 133 Op 5 . - CDS 306761 - 307813 553 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 261 134 Tu 1 . + CDS 307891 - 308775 563 ## BAD_0352 hypothetical protein + TRNA 308973 - 309061 57.9 # Ser CGA 0 0 262 135 Tu 1 . - CDS 309103 - 309240 180 ## BDP_0461 hypothetical protein + Prom 308987 - 309046 80.4 263 136 Tu 1 . + CDS 309142 - 309390 110 ## + Term 309517 - 309552 -0.9 264 137 Op 1 . - CDS 309278 - 309487 79 ## BLD_1737 hypothetical protein 265 137 Op 2 4/0.026 - CDS 309571 - 310566 903 ## COG0101 Pseudouridylate synthase 266 137 Op 3 50/0.000 - CDS 310594 - 311076 709 ## PROTEIN SUPPORTED gi|119025366|ref|YP_909211.1| 50S ribosomal protein L17 267 137 Op 4 32/0.000 - CDS 311165 - 312163 1425 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 268 137 Op 5 48/0.000 - CDS 312244 - 312642 667 ## PROTEIN SUPPORTED gi|119025364|ref|YP_909209.1| 30S ribosomal protein S11 269 137 Op 6 . - CDS 312727 - 313137 687 ## PROTEIN SUPPORTED gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 270 138 Op 1 . - CDS 313241 - 313354 200 ## PROTEIN SUPPORTED gi|23466153|ref|NP_696756.1| 50S ribosomal protein L36 271 138 Op 2 . - CDS 313377 - 313595 285 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 - Prom 313717 - 313776 3.9 + Prom 313326 - 313385 2.9 272 139 Tu 1 . + CDS 313594 - 313749 64 ## gi|225351022|ref|ZP_03742045.1| hypothetical protein BIFPSEUDO_02604 + Term 313787 - 313826 1.0 - Term 313648 - 313710 18.0 273 140 Op 1 28/0.000 - CDS 313783 - 314343 827 ## COG0563 Adenylate kinase and related kinases - Term 314393 - 314441 13.1 274 140 Op 2 53/0.000 - CDS 314452 - 315789 830 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 - Prom 315846 - 315905 3.3 - Term 315940 - 315998 21.0 275 141 Op 1 . - CDS 316026 - 316472 727 ## PROTEIN SUPPORTED gi|119025358|ref|YP_909203.1| 50S ribosomal protein L15 276 141 Op 2 . - CDS 316475 - 316660 294 ## PROTEIN SUPPORTED gi|119025357|ref|YP_909202.1| 50S ribosomal protein L30 277 141 Op 3 56/0.000 - CDS 316657 - 317382 1177 ## PROTEIN SUPPORTED gi|119025356|ref|YP_909201.1| 30S ribosomal protein S5 278 141 Op 4 46/0.000 - CDS 317379 - 317750 585 ## PROTEIN SUPPORTED gi|119025355|ref|YP_909200.1| 50S ribosomal protein L18 279 141 Op 5 55/0.000 - CDS 317750 - 318289 875 ## PROTEIN SUPPORTED gi|119025354|ref|YP_909199.1| 50S ribosomal protein L6 280 141 Op 6 50/0.000 - CDS 318307 - 318705 669 ## PROTEIN SUPPORTED gi|119025353|ref|YP_909198.1| 30S ribosomal protein S8 281 141 Op 7 50/0.000 - CDS 318790 - 318975 331 ## PROTEIN SUPPORTED gi|119025352|ref|YP_909197.1| 30S ribosomal protein S14 282 141 Op 8 48/0.000 - CDS 318977 - 319549 973 ## PROTEIN SUPPORTED gi|119025351|ref|YP_909196.1| 50S ribosomal protein L5 283 141 Op 9 57/0.000 - CDS 319546 - 319881 541 ## PROTEIN SUPPORTED gi|119025350|ref|YP_909195.1| 50S ribosomal protein L24 284 141 Op 10 50/0.000 - CDS 319883 - 320251 604 ## PROTEIN SUPPORTED gi|119025349|ref|YP_909194.1| 50S ribosomal protein L14 285 141 Op 11 50/0.000 - CDS 320343 - 320603 438 ## PROTEIN SUPPORTED gi|119025348|ref|YP_909193.1| 30S ribosomal protein S17 286 141 Op 12 50/0.000 - CDS 320603 - 320860 421 ## PROTEIN SUPPORTED gi|119025347|ref|YP_909192.1| 50S ribosomal protein L29 287 141 Op 13 50/0.000 - CDS 320860 - 321279 728 ## PROTEIN SUPPORTED gi|119025346|ref|YP_909191.1| 50S ribosomal protein L16 288 141 Op 14 61/0.000 - CDS 321288 - 322091 1330 ## PROTEIN SUPPORTED gi|119025345|ref|YP_909190.1| 30S ribosomal protein S3 289 141 Op 15 59/0.000 - CDS 322094 - 322453 582 ## PROTEIN SUPPORTED gi|119025344|ref|YP_909189.1| 50S ribosomal protein L22 290 141 Op 16 60/0.000 - CDS 322470 - 322748 493 ## PROTEIN SUPPORTED gi|119025343|ref|YP_909188.1| 30S ribosomal protein S19 291 141 Op 17 61/0.000 - CDS 322764 - 323594 1439 ## PROTEIN SUPPORTED gi|119025342|ref|YP_909187.1| 50S ribosomal protein L2 292 141 Op 18 61/0.000 - CDS 323631 - 323927 471 ## PROTEIN SUPPORTED gi|224283711|ref|ZP_03647033.1| 50S ribosomal protein L23 293 141 Op 19 58/0.000 - CDS 323933 - 324598 1102 ## PROTEIN SUPPORTED gi|119025340|ref|YP_909185.1| 50S ribosomal protein L4 294 141 Op 20 40/0.000 - CDS 324605 - 325246 1091 ## PROTEIN SUPPORTED gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 295 141 Op 21 . - CDS 325264 - 325572 520 ## PROTEIN SUPPORTED gi|154486746|ref|ZP_02028153.1| hypothetical protein BIFADO_00571 - Term 325920 - 325978 15.3 296 142 Tu 1 . - CDS 326050 - 328779 3861 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 329023 - 329082 4.9 297 143 Tu 1 . + CDS 328897 - 329079 170 ## gi|154486743|ref|ZP_02028150.1| hypothetical protein BIFADO_00568 + Term 329108 - 329139 -0.6 - Term 328981 - 329020 2.8 298 144 Op 1 . - CDS 329133 - 330104 568 ## COG2207 AraC-type DNA-binding domain-containing proteins 299 144 Op 2 7/0.000 - CDS 330144 - 331184 1219 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 300 144 Op 3 . - CDS 331258 - 332526 1083 ## COG0477 Permeases of the major facilitator superfamily - Prom 332583 - 332642 3.0 + Prom 332586 - 332645 2.3 301 145 Tu 1 . + CDS 332744 - 333874 1016 ## COG1940 Transcriptional regulator/sugar kinase 302 146 Tu 1 . - CDS 334043 - 334444 578 ## BAD_0314 hypothetical protein - Prom 334488 - 334547 3.0 + Prom 334421 - 334480 2.5 303 147 Op 1 . + CDS 334500 - 334760 62 ## gi|225351054|ref|ZP_03742077.1| hypothetical protein BIFPSEUDO_02636 304 147 Op 2 . + CDS 334757 - 337204 2293 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Term 337240 - 337278 9.3 - Term 337226 - 337266 7.2 305 148 Op 1 59/0.000 - CDS 337288 - 337779 806 ## PROTEIN SUPPORTED gi|119025328|ref|YP_909173.1| 30S ribosomal protein S9 306 148 Op 2 . - CDS 337800 - 338249 730 ## PROTEIN SUPPORTED gi|119025327|ref|YP_909172.1| 50S ribosomal protein L13 - Prom 338416 - 338475 1.9 - Term 338493 - 338546 12.1 307 149 Op 1 . - CDS 338595 - 340757 2546 ## COG1640 4-alpha-glucanotransferase 308 149 Op 2 . - CDS 340827 - 341534 728 ## BDP_0417 hypothetical protein 309 149 Op 3 . - CDS 341589 - 342227 623 ## COG1739 Uncharacterized conserved protein 310 149 Op 4 . - CDS 342293 - 343279 1169 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 311 149 Op 5 . - CDS 343359 - 344723 1203 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 312 149 Op 6 . - CDS 344791 - 346095 689 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + TRNA 346330 - 346420 53.5 # Ser GCT 0 0 - Term 346540 - 346568 -0.2 313 150 Op 1 . - CDS 346784 - 348235 1070 ## COG2272 Carboxylesterase type B 314 150 Op 2 . - CDS 348232 - 349821 820 ## COG3507 Beta-xylosidase 315 150 Op 3 . - CDS 349818 - 350957 1143 ## COG3405 Endoglucanase Y 316 150 Op 4 . - CDS 350959 - 353001 1549 ## BAD_0299 putative outer membrane protein 317 150 Op 5 . - CDS 353030 - 353140 65 ## gi|212716636|ref|ZP_03324764.1| hypothetical protein BIFCAT_01566 318 151 Op 1 . - CDS 353258 - 354889 1602 ## COG3507 Beta-xylosidase 319 151 Op 2 44/0.000 - CDS 354976 - 355797 198 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 320 151 Op 3 44/0.000 - CDS 355809 - 356660 190 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 321 151 Op 4 49/0.000 - CDS 356666 - 357595 709 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 322 151 Op 5 38/0.000 - CDS 357604 - 358596 236 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Term 358610 - 358659 9.1 323 151 Op 6 1/0.090 - CDS 358683 - 360371 1811 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 360450 - 360509 4.6 - Term 360678 - 360717 10.5 324 152 Op 1 4/0.026 - CDS 360732 - 361886 922 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Term 361911 - 361952 10.2 325 152 Op 2 . - CDS 361966 - 362286 500 ## COG1146 Ferredoxin 326 152 Op 3 . - CDS 362323 - 363813 1852 ## COG0531 Amino acid transporters 327 152 Op 4 . - CDS 363844 - 365043 1142 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Term 365102 - 365132 3.0 328 153 Tu 1 . - CDS 365152 - 365322 300 ## PROTEIN SUPPORTED gi|119025311|ref|YP_909156.1| 50S ribosomal protein L33 - TRNA 365372 - 365448 80.9 # Met CAT 0 0 - TRNA 365454 - 365525 73.0 # Thr GGT 0 0 - TRNA 365527 - 365608 64.3 # Tyr GTA 0 0 - Term 365929 - 365989 17.6 329 154 Tu 1 . - CDS 366012 - 366305 605 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 366402 - 366461 1.7 330 155 Tu 1 . + CDS 366268 - 366450 119 ## + Term 366476 - 366513 7.1 - Term 366462 - 366499 7.1 331 156 Op 1 . - CDS 366559 - 367761 1091 ## BAD_0291 hypothetical protein 332 156 Op 2 . - CDS 367861 - 368484 376 ## PROTEIN SUPPORTED gi|227427635|ref|ZP_03910696.1| acetyltransferase, ribosomal protein N-acetylase 333 157 Op 1 . + CDS 368459 - 369241 349 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 334 157 Op 2 . + CDS 369339 - 369521 196 ## BDP_0401 hypothetical protein + Term 369641 - 369683 8.8 + Prom 369601 - 369660 2.7 335 158 Tu 1 . + CDS 369768 - 370349 377 ## BAD_0288 hypothetical protein - Term 370310 - 370357 3.9 336 159 Op 1 . - CDS 370378 - 370647 185 ## BDP_0399 hypothetical protein 337 159 Op 2 . - CDS 370644 - 374264 3854 ## BAD_0287 hypothetical protein 338 159 Op 3 . - CDS 374273 - 375682 1332 ## BAD_0286 hypothetical protein - Prom 375714 - 375773 1.9 - Term 375859 - 375910 14.0 339 160 Op 1 47/0.000 - CDS 375946 - 376326 565 ## PROTEIN SUPPORTED gi|213693116|ref|YP_002323702.1| ribosomal protein L7/L12 - Prom 376352 - 376411 3.4 340 160 Op 2 . - CDS 376437 - 376958 840 ## PROTEIN SUPPORTED gi|119025302|ref|YP_909147.1| 50S ribosomal protein L10 341 161 Tu 1 . + CDS 377359 - 378747 2177 ## COG2252 Permeases + Term 378803 - 378848 12.1 - Term 378789 - 378835 8.5 342 162 Tu 1 . - CDS 378886 - 379779 902 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 379803 - 379862 5.7 - Term 380076 - 380102 0.3 343 163 Op 1 41/0.000 - CDS 380279 - 381058 193 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 344 163 Op 2 38/0.000 - CDS 381100 - 382095 1232 ## COG0581 ABC-type phosphate transport system, permease component 345 163 Op 3 39/0.000 - CDS 382095 - 383048 1446 ## COG0573 ABC-type phosphate transport system, permease component - Term 383150 - 383212 18.4 346 164 Op 1 6/0.000 - CDS 383261 - 384037 933 ## COG0226 ABC-type phosphate transport system, periplasmic component 347 164 Op 2 . - CDS 383782 - 384390 426 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 384636 - 384695 4.3 348 165 Op 1 40/0.000 - CDS 384712 - 385416 1010 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 349 165 Op 2 . - CDS 385499 - 386863 1308 ## COG0642 Signal transduction histidine kinase - Term 386987 - 387040 17.4 350 166 Op 1 . - CDS 387046 - 387753 1024 ## COG0775 Nucleoside phosphorylase 351 166 Op 2 1/0.090 - CDS 387814 - 388998 1189 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 389081 - 389140 2.8 - Term 389055 - 389105 6.0 352 167 Tu 1 . - CDS 389145 - 390278 1234 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 390325 - 390384 2.2 - Term 390365 - 390430 22.5 353 168 Op 1 . - CDS 390455 - 391795 1779 ## COG3579 Aminopeptidase C 354 168 Op 2 . - CDS 391788 - 393266 2149 ## BAD_0271 hypothetical protein - Prom 393319 - 393378 1.8 355 169 Op 1 . - CDS 393415 - 394104 755 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 356 169 Op 2 . - CDS 394146 - 394955 285 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 357 170 Op 1 . - CDS 395061 - 396077 1239 ## COG1496 Uncharacterized conserved protein - Prom 396100 - 396159 3.5 358 170 Op 2 . - CDS 396161 - 397699 1745 ## COG0826 Collagenase and related proteases - Term 397797 - 397833 6.3 359 171 Tu 1 . - CDS 397862 - 398725 1154 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 360 172 Tu 1 . - CDS 398833 - 401046 1890 ## BDP_0369 hypothetical protein - Term 401106 - 401150 9.8 361 173 Tu 1 . - CDS 401158 - 401718 834 ## COG1704 Uncharacterized conserved protein - Prom 401793 - 401852 3.7 - Term 401816 - 401856 9.1 362 174 Op 1 26/0.000 - CDS 401897 - 404560 1441 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase - Term 404736 - 404777 10.1 363 174 Op 2 . - CDS 404789 - 405058 449 ## PROTEIN SUPPORTED gi|119025277|ref|YP_909122.1| 30S ribosomal protein S15 364 175 Tu 1 . - CDS 405191 - 405865 825 ## BDP_0365 hypothetical protein + Prom 405516 - 405575 2.1 365 176 Tu 1 . + CDS 405791 - 406048 77 ## - TRNA 406017 - 406090 79.8 # Gly TCC 0 0 - Term 405962 - 405993 3.2 366 177 Tu 1 . - CDS 406179 - 407996 2307 ## COG0366 Glycosidases - Prom 408067 - 408126 2.5 367 178 Op 1 . - CDS 408159 - 408617 306 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 368 178 Op 2 . - CDS 408598 - 408711 98 ## - Prom 408792 - 408851 3.4 369 179 Tu 1 . + CDS 408656 - 408778 84 ## + Term 408840 - 408895 11.1 - Term 408828 - 408883 13.4 370 180 Op 1 . - CDS 408938 - 418276 11002 ## COG4982 3-oxoacyl-[acyl-carrier protein] reductase 371 180 Op 2 7/0.000 - CDS 418374 - 420038 1876 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 372 180 Op 3 . - CDS 420038 - 421948 1928 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit - Prom 422044 - 422103 2.5 + Prom 422063 - 422122 1.9 373 181 Tu 1 . + CDS 422189 - 422770 1015 ## COG1268 Uncharacterized conserved protein 374 182 Op 1 . - CDS 422804 - 423691 877 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 375 182 Op 2 . - CDS 423775 - 425874 1578 ## BAD_0250 hypothetical protein + Prom 425825 - 425884 3.3 376 183 Tu 1 . + CDS 425960 - 426739 583 ## COG2508 Regulator of polyketide synthase expression + Term 426863 - 426908 8.0 - Term 426845 - 426903 10.0 377 184 Op 1 55/0.000 - CDS 426937 - 427629 1138 ## PROTEIN SUPPORTED gi|119025266|ref|YP_909111.1| 50S ribosomal protein L1 378 184 Op 2 45/0.000 - CDS 427644 - 428075 705 ## PROTEIN SUPPORTED gi|119025265|ref|YP_909110.1| 50S ribosomal protein L11 - Term 428240 - 428280 9.7 379 185 Op 1 . - CDS 428290 - 429087 1178 ## COG0250 Transcription antiterminator 380 185 Op 2 . - CDS 429112 - 429339 396 ## BAD_0245 preprotein translocase subunit SecE - Prom 429528 - 429587 3.6 - TRNA 429373 - 429448 87.9 # Trp CCA 0 0 - Term 429601 - 429647 11.1 381 186 Op 1 . - CDS 429675 - 430898 1662 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 382 186 Op 2 7/0.000 - CDS 431020 - 432153 954 ## COG0263 Glutamate 5-kinase - Term 432177 - 432220 11.3 383 187 Op 1 14/0.000 - CDS 432234 - 433925 2166 ## COG0536 Predicted GTPase - Term 434051 - 434087 3.1 384 187 Op 2 32/0.000 - CDS 434118 - 434369 424 ## PROTEIN SUPPORTED gi|119025259|ref|YP_909104.1| 50S ribosomal protein L27 385 187 Op 3 4/0.026 - CDS 434409 - 434717 463 ## PROTEIN SUPPORTED gi|119025258|ref|YP_909103.1| 50S ribosomal protein L21 - Prom 434784 - 434843 4.2 - Term 434731 - 434787 -0.8 386 188 Tu 1 . - CDS 434870 - 437683 3148 ## COG1530 Ribonucleases G and E - Prom 437908 - 437967 2.7 387 189 Tu 1 . + CDS 437918 - 438151 112 ## - Term 438067 - 438109 -0.9 388 190 Tu 1 . - CDS 438189 - 439385 1194 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 389 191 Tu 1 . + CDS 439524 - 440468 1317 ## COG0679 Predicted permeases 390 192 Op 1 . - CDS 440516 - 442021 1375 ## BAD_0236 hypothetical protein 391 192 Op 2 . - CDS 442018 - 442743 291 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 392 193 Op 1 4/0.026 - CDS 442872 - 443621 612 ## COG0164 Ribonuclease HII 393 193 Op 2 5/0.026 - CDS 443621 - 444271 595 ## COG0681 Signal peptidase I - Prom 444317 - 444376 2.0 394 194 Tu 1 . - CDS 444391 - 444756 572 ## PROTEIN SUPPORTED gi|183601861|ref|ZP_02963230.1| 50S ribosomal protein L19 - Prom 444987 - 445046 2.7 395 195 Tu 1 . + CDS 444834 - 445037 108 ## gi|225351151|ref|ZP_03742174.1| hypothetical protein BIFPSEUDO_02739 - Term 445032 - 445068 7.2 396 196 Tu 1 . - CDS 445098 - 446795 2721 ## COG0166 Glucose-6-phosphate isomerase 397 197 Tu 1 . - CDS 447210 - 448217 891 ## COG0679 Predicted permeases - TRNA 448595 - 448675 66.5 # Leu TAG 0 0 - Term 448618 - 448650 -0.1 398 198 Op 1 . - CDS 448654 - 448902 56 ## - TRNA 448743 - 448818 88.3 # Thr CGT 0 0 399 198 Op 2 3/0.026 - CDS 448925 - 450229 1060 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 450282 - 450341 4.6 - Term 450338 - 450377 3.2 400 199 Op 1 . - CDS 450390 - 451658 1226 ## COG2348 Uncharacterized protein involved in methicillin resistance 401 199 Op 2 . - CDS 451732 - 453054 1459 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 453281 - 453340 2.1 + Prom 453085 - 453144 4.4 402 200 Op 1 8/0.000 + CDS 453341 - 454102 878 ## COG0689 RNase PH 403 200 Op 2 . + CDS 454242 - 454916 379 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein + Term 454966 - 455018 14.0 404 201 Tu 1 . - CDS 455084 - 455530 470 ## COG0789 Predicted transcriptional regulators - Prom 455552 - 455611 2.7 + Prom 455487 - 455546 3.4 405 202 Tu 1 . + CDS 455727 - 456737 1343 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 456787 - 456853 3.5 406 203 Tu 1 . - CDS 456930 - 457256 336 ## BAD_0227 hypothetical protein 407 204 Op 1 . + CDS 457374 - 457868 338 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 408 204 Op 2 . + CDS 457868 - 458638 901 ## BAD_0226 hypothetical protein 409 204 Op 3 . + CDS 458653 - 459279 811 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein + Prom 459297 - 459356 4.1 410 205 Tu 1 . + CDS 459396 - 459590 341 ## PROTEIN SUPPORTED gi|119025242|ref|YP_909087.1| 50S ribosomal protein L32 + Term 459619 - 459664 11.2 + Prom 459606 - 459665 3.1 411 206 Tu 1 . + CDS 459913 - 460740 952 ## COG0571 dsRNA-specific ribonuclease 412 207 Tu 1 . - CDS 460683 - 461000 153 ## - Prom 461160 - 461219 2.2 413 208 Op 1 32/0.000 + CDS 461002 - 462870 2436 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 414 208 Op 2 . + CDS 462908 - 463456 949 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 463484 - 463527 10.2 415 209 Tu 1 . - CDS 463857 - 464231 241 ## BAD_0215 hypothetical protein 416 210 Tu 1 . - CDS 464590 - 466770 2487 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 466841 - 466876 -0.5 417 211 Tu 1 . - CDS 466877 - 467617 766 ## COG0518 GMP synthase - Glutamine amidotransferase domain - Prom 467678 - 467737 1.8 + Prom 467508 - 467567 2.2 418 212 Op 1 . + CDS 467702 - 469375 1709 ## COG0215 Cysteinyl-tRNA synthetase + Term 469399 - 469448 9.1 419 212 Op 2 . + CDS 469547 - 471196 2129 ## COG0541 Signal recognition particle GTPase + Term 471230 - 471272 10.2 - Term 471218 - 471260 7.2 420 213 Tu 1 . - CDS 471321 - 472355 930 ## BDP_0313 hypothetical protein + Prom 472605 - 472664 3.9 421 214 Op 1 19/0.000 + CDS 472784 - 473233 730 ## PROTEIN SUPPORTED gi|119025227|ref|YP_909072.1| 30S ribosomal protein S16 422 214 Op 2 12/0.000 + CDS 473236 - 473469 346 ## COG1837 Predicted RNA-binding protein (contains KH domain) 423 214 Op 3 30/0.000 + CDS 473491 - 474078 823 ## COG0806 RimM protein, required for 16S rRNA processing + Term 474092 - 474127 -0.3 + Prom 474122 - 474181 4.4 424 214 Op 4 . + CDS 474213 - 475097 904 ## COG0336 tRNA-(guanine-N1)-methyltransferase + Term 475119 - 475171 8.5 - Term 475116 - 475147 1.0 425 215 Op 1 1/0.090 - CDS 475148 - 475762 200 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 426 215 Op 2 . - CDS 475795 - 478485 1557 ## COG1200 RecG-like helicase - Term 478815 - 478860 13.1 427 216 Op 1 . - CDS 478879 - 479073 339 ## PROTEIN SUPPORTED gi|119025221|ref|YP_909066.1| 50S ribosomal protein L28 - Prom 479155 - 479214 3.5 428 216 Op 2 . - CDS 479371 - 481371 1584 ## BDP_0303 hypothetical protein - Prom 481468 - 481527 3.7 + Prom 481660 - 481719 7.3 429 217 Tu 1 . + CDS 481756 - 483084 1497 ## COG2270 Permeases of the major facilitator superfamily + Term 483111 - 483165 3.1 - Term 483184 - 483234 -0.7 430 218 Tu 1 . - CDS 483382 - 484116 861 ## COG2186 Transcriptional regulators - Prom 484257 - 484316 5.5 + Prom 484286 - 484345 6.2 431 219 Tu 1 . + CDS 484393 - 484944 594 ## COG3265 Gluconate kinase 432 220 Tu 1 . - CDS 484941 - 485252 222 ## 433 221 Tu 1 . + CDS 485163 - 486509 1864 ## COG2610 H+/gluconate symporter and related permeases 434 222 Tu 1 . - CDS 486422 - 486598 130 ## - Prom 486681 - 486740 1.8 + Prom 486562 - 486621 2.0 435 223 Tu 1 . + CDS 486708 - 487601 1081 ## COG1023 Predicted 6-phosphogluconate dehydrogenase - Term 487671 - 487721 2.5 436 224 Tu 1 . - CDS 487958 - 489148 1559 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Term 489193 - 489243 4.2 437 225 Tu 1 . - CDS 489267 - 489941 598 ## BDP_0293 TetR family transcriptional regulator - Prom 489980 - 490039 4.2 - Term 490041 - 490091 0.8 438 226 Op 1 . - CDS 490111 - 491316 1073 ## BDP_0292 hypothetical protein 439 226 Op 2 . - CDS 491316 - 492542 1041 ## BAD_0193 hypothetical protein - Prom 492770 - 492829 1.6 440 227 Tu 1 . + CDS 492768 - 493553 1099 ## COG0668 Small-conductance mechanosensitive channel + Term 493599 - 493640 6.2 - Term 493587 - 493628 10.2 441 228 Tu 1 . - CDS 493644 - 494606 1031 ## BAD_0191 hypothetical protein - Term 494791 - 494844 11.5 442 229 Op 1 8/0.000 - CDS 494890 - 496071 1291 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 443 229 Op 2 5/0.026 - CDS 496068 - 496931 1099 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 444 229 Op 3 3/0.026 - CDS 496922 - 497875 984 ## COG4132 ABC-type uncharacterized transport system, permease component 445 230 Tu 1 . - CDS 498093 - 499256 1752 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Prom 499369 - 499428 2.3 - Term 499398 - 499452 5.8 446 231 Tu 1 . - CDS 499496 - 500632 1504 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes - Prom 500856 - 500915 4.9 - Term 501038 - 501080 7.5 447 232 Tu 1 . - CDS 501105 - 502103 1336 ## COG0240 Glycerol-3-phosphate dehydrogenase 448 233 Tu 1 . - CDS 502308 - 503198 759 ## BAD_0184 hypothetical protein - Term 503601 - 503641 9.1 449 234 Tu 1 . - CDS 503688 - 505013 1688 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Prom 505050 - 505109 2.8 - Term 505299 - 505329 1.1 450 235 Tu 1 . - CDS 505437 - 506615 1314 ## COG0167 Dihydroorotate dehydrogenase - Term 507021 - 507056 0.4 451 236 Op 1 30/0.000 - CDS 507058 - 507747 846 ## COG0066 3-isopropylmalate dehydratase small subunit - Term 507771 - 507805 1.1 452 236 Op 2 . - CDS 507828 - 509231 1634 ## COG0065 3-isopropylmalate dehydratase large subunit 453 237 Tu 1 . + CDS 509307 - 509492 93 ## gi|225351218|ref|ZP_03742241.1| hypothetical protein BIFPSEUDO_02808 + Prom 509521 - 509580 5.1 454 238 Tu 1 . + CDS 509608 - 510402 962 ## COG1414 Transcriptional regulator + Term 510425 - 510465 3.3 455 239 Tu 1 . - CDS 510523 - 512046 842 ## BDP_0266 hypothetical protein - Prom 512190 - 512249 3.7 - TRNA 512138 - 512212 63.3 # Gln CTG 0 0 - TRNA 512248 - 512323 49.2 # Glu CTC 0 0 - Term 512444 - 512490 11.1 456 240 Tu 1 . - CDS 512528 - 514048 2196 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 514285 - 514344 2.7 457 241 Op 1 . + CDS 514117 - 514365 89 ## gi|225351222|ref|ZP_03742245.1| hypothetical protein BIFPSEUDO_02814 458 241 Op 2 . + CDS 514370 - 515683 1295 ## COG3152 Predicted membrane protein + Term 515747 - 515798 9.1 - Term 515734 - 515785 17.0 459 242 Op 1 . - CDS 515839 - 516942 860 ## BAD_0174 hypothetical protein 460 242 Op 2 . - CDS 517034 - 517693 731 ## COG0406 Fructose-2,6-bisphosphatase - Prom 517854 - 517913 5.8 461 243 Tu 1 . + CDS 518143 - 519567 1594 ## COG0477 Permeases of the major facilitator superfamily + Term 519603 - 519652 16.1 - Term 519590 - 519638 12.1 462 244 Tu 1 . - CDS 519744 - 520280 665 ## BAD_0171 hypothetical protein - Prom 520431 - 520490 3.6 463 245 Op 1 . + CDS 520197 - 520430 73 ## 464 245 Op 2 . + CDS 520455 - 520802 648 ## BDP_0258 MIFH/DOPD protein family + Term 520899 - 520939 0.1 - Term 521086 - 521133 13.0 465 246 Tu 1 . - CDS 521169 - 522686 1932 ## COG2759 Formyltetrahydrofolate synthetase - Prom 522714 - 522773 4.1 - Term 522740 - 522779 7.7 466 247 Tu 1 . - CDS 522793 - 524385 2226 ## COG4690 Dipeptidase - Prom 524447 - 524506 3.5 467 248 Tu 1 . - CDS 524518 - 525075 479 ## COG1881 Phospholipid-binding protein - Prom 525127 - 525186 1.9 - Term 525098 - 525136 -0.9 468 249 Tu 1 . - CDS 525267 - 526916 2653 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) - Prom 527078 - 527137 3.4 + Prom 527015 - 527074 4.3 469 250 Tu 1 . + CDS 527260 - 527520 464 ## BDP_0253 HPr family phosphocarrier (EC:2.7.3.9) + Term 527591 - 527633 0.4 - Term 527571 - 527625 5.2 470 251 Tu 1 . - CDS 527660 - 527824 179 ## + Prom 527652 - 527711 2.2 471 252 Tu 1 . + CDS 527736 - 528773 1069 ## COG1609 Transcriptional regulators 472 253 Op 1 22/0.000 - CDS 528905 - 530059 889 ## COG0470 ATPase involved in DNA replication 473 253 Op 2 . - CDS 530056 - 530709 459 ## COG0125 Thymidylate kinase 474 253 Op 3 . - CDS 530784 - 533840 3103 ## COG0550 Topoisomerase IA - Prom 533866 - 533925 3.5 475 254 Tu 1 . - CDS 533966 - 535045 763 ## BAD_0160 pre-pilin peptidase + Prom 535370 - 535429 2.4 476 255 Tu 1 . + CDS 535454 - 536632 1812 ## COG0562 UDP-galactopyranose mutase + Term 536666 - 536706 6.8 - Term 536651 - 536697 13.6 477 256 Tu 1 . - CDS 536720 - 537862 1068 ## PROTEIN SUPPORTED gi|163782670|ref|ZP_02177667.1| 50S ribosomal protein L20 - Prom 537916 - 537975 3.4 + Prom 537819 - 537878 1.9 478 257 Tu 1 . + CDS 538107 - 540389 2973 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Term 540460 - 540511 18.2 479 258 Tu 1 . - CDS 540603 - 543164 2051 ## COG3533 Uncharacterized protein conserved in bacteria - Prom 543305 - 543364 1.7 - Term 543222 - 543281 17.0 480 259 Op 1 38/0.000 - CDS 543378 - 544286 1463 ## COG0395 ABC-type sugar transport system, permease component 481 259 Op 2 35/0.000 - CDS 544283 - 545230 1403 ## COG1175 ABC-type sugar transport systems, permease components - Term 545260 - 545319 19.9 482 260 Op 1 . - CDS 545381 - 546697 2073 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 546823 - 546882 5.0 483 260 Op 2 . - CDS 546950 - 547966 758 ## PROTEIN SUPPORTED gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase - Prom 548004 - 548063 7.9 - Term 548127 - 548183 1.5 484 261 Op 1 . - CDS 548235 - 549311 1514 ## COG1609 Transcriptional regulators 485 261 Op 2 . - CDS 549395 - 551512 217 ## PROTEIN SUPPORTED gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase - Prom 551549 - 551608 4.6 + Prom 551506 - 551565 3.5 486 262 Op 1 . + CDS 551614 - 553200 2309 ## COG3507 Beta-xylosidase 487 262 Op 2 . + CDS 553176 - 554855 1380 ## COG3507 Beta-xylosidase - Term 554914 - 554973 22.0 488 263 Tu 1 . - CDS 554999 - 556909 2509 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 556961 - 557020 2.1 489 264 Tu 1 . + CDS 557108 - 558703 1250 ## BAD_0144 hypothetical protein 490 265 Tu 1 . - CDS 558804 - 559424 620 ## BDP_0233 hypothetical protein + Prom 559667 - 559726 1.5 491 266 Tu 1 . + CDS 559821 - 560915 1615 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 560935 - 560977 2.9 - Term 560987 - 561033 10.1 492 267 Op 1 1/0.090 - CDS 561158 - 561724 831 ## COG0527 Aspartokinases 493 267 Op 2 . - CDS 561809 - 562570 851 ## COG0527 Aspartokinases - Prom 562620 - 562679 4.8 - Term 562752 - 562785 1.3 494 268 Tu 1 1/0.090 - CDS 562809 - 563411 743 ## COG0353 Recombinational DNA repair protein (RecF pathway) 495 269 Tu 1 . - CDS 563522 - 566152 2567 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 566323 - 566382 3.5 + Prom 566294 - 566353 3.5 496 270 Op 1 . + CDS 566425 - 567021 626 ## BDP_0225 TetR-type transcriptional regulator 497 270 Op 2 . + CDS 567068 - 568051 1576 ## BDP_0224 hypothetical protein + Term 568093 - 568155 17.0 498 271 Tu 1 . - CDS 568253 - 569404 929 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 499 272 Tu 1 . - CDS 569560 - 569940 255 ## BAD_0134 hypothetical protein 500 273 Op 1 . - CDS 570112 - 570480 220 ## BDP_0215 hypothetical protein 501 273 Op 2 . - CDS 570484 - 570771 373 ## BDP_0214 hypothetical protein - Term 570782 - 570812 3.0 502 274 Op 1 . - CDS 570993 - 571517 274 ## BAD_0131 hypothetical protein 503 274 Op 2 . - CDS 571517 - 572248 324 ## BDP_0212 hypothetical protein 504 274 Op 3 . - CDS 572263 - 573252 638 ## COG4962 Flp pilus assembly protein, ATPase CpaF 505 274 Op 4 . - CDS 573233 - 574009 523 ## BDP_0210 ATPase 506 275 Op 1 . + CDS 574030 - 574575 43 ## + Term 574703 - 574734 -0.8 + Prom 574619 - 574678 3.6 507 275 Op 2 . + CDS 574862 - 577096 2909 ## COG0855 Polyphosphate kinase + Term 577103 - 577154 19.9 508 276 Op 1 . + CDS 577269 - 578345 821 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 509 276 Op 2 . + CDS 578347 - 579090 752 ## BDP_0203 hypothetical protein 510 276 Op 3 . + CDS 579053 - 579193 64 ## + Term 579283 - 579308 -0.5 511 277 Tu 1 . - CDS 579173 - 579346 136 ## + Prom 579294 - 579353 3.2 512 278 Tu 1 . + CDS 579425 - 580066 955 ## COG0035 Uracil phosphoribosyltransferase - Term 580111 - 580161 11.1 513 279 Op 1 . - CDS 580180 - 581244 1352 ## COG0584 Glycerophosphoryl diester phosphodiesterase 514 279 Op 2 . - CDS 581343 - 581495 83 ## - Prom 581678 - 581737 2.1 - Term 581629 - 581655 -0.6 515 280 Tu 1 . - CDS 581850 - 585263 3085 ## BLLJ_0213 glycosyl hydrolase 516 281 Tu 1 . - CDS 585373 - 590955 6268 ## BDP_1701 beta-galactosidase BbgIII (EC:3.2.1.35) - Prom 591077 - 591136 2.6 - Term 591212 - 591253 10.0 517 282 Op 1 . - CDS 591362 - 593335 1674 ## COG3533 Uncharacterized protein conserved in bacteria 518 282 Op 2 38/0.000 - CDS 593466 - 594284 1243 ## COG0395 ABC-type sugar transport system, permease component 519 282 Op 3 . - CDS 594304 - 595230 1345 ## COG1175 ABC-type sugar transport systems, permease components - Prom 595461 - 595520 2.0 520 283 Tu 1 . + CDS 595292 - 595534 136 ## gi|225351289|ref|ZP_03742312.1| hypothetical protein BIFPSEUDO_02881 521 284 Tu 1 . - CDS 595528 - 596853 1935 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 597066 - 597125 5.5 + Prom 597209 - 597268 4.6 522 285 Tu 1 . + CDS 597340 - 598359 949 ## COG1609 Transcriptional regulators 523 286 Tu 1 . - CDS 598362 - 600215 1770 ## COG0661 Predicted unusual protein kinase + Prom 599764 - 599823 2.6 524 287 Tu 1 . + CDS 600004 - 600468 129 ## + Term 600487 - 600526 -0.3 - Term 600370 - 600417 9.3 525 288 Op 1 . - CDS 600434 - 600682 451 ## BAD_0119 hypothetical protein - Prom 600705 - 600764 2.1 526 288 Op 2 10/0.000 - CDS 600881 - 601639 961 ## COG3442 Predicted glutamine amidotransferase 527 288 Op 3 . - CDS 601745 - 603271 1443 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 528 288 Op 4 . - CDS 603274 - 604722 1437 ## COG0305 Replicative DNA helicase - Prom 604757 - 604816 2.7 - Term 604917 - 604960 3.1 529 289 Tu 1 . - CDS 605141 - 606967 1329 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase - Prom 607001 - 607060 1.9 - Term 607049 - 607090 8.3 530 290 Op 1 24/0.000 - CDS 607151 - 607489 529 ## COG0347 Nitrogen regulatory protein PII 531 290 Op 2 1/0.090 - CDS 607491 - 608786 1711 ## COG0004 Ammonia permease - Prom 608825 - 608884 1.8 - Term 609053 - 609091 10.1 532 291 Tu 1 . - CDS 609109 - 610371 522 ## PROTEIN SUPPORTED gi|157804145|ref|YP_001492694.1| 50S ribosomal protein L32 + Prom 610268 - 610327 1.9 533 292 Tu 1 . + CDS 610538 - 611347 933 ## COG1309 Transcriptional regulator + Prom 611460 - 611519 1.9 534 293 Tu 1 . + CDS 611649 - 612680 1187 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 535 294 Tu 1 . - CDS 612893 - 614548 1472 ## COG4690 Dipeptidase - Prom 614726 - 614785 77.8 + TRNA 614707 - 614779 73.8 # Lys TTT 0 0 + Prom 614704 - 614763 74.6 536 295 Op 1 . + CDS 614783 - 615019 156 ## + Term 615085 - 615125 -0.6 + Prom 615050 - 615109 3.1 537 295 Op 2 . + CDS 615209 - 615911 1050 ## gi|225351307|ref|ZP_03742330.1| hypothetical protein BIFPSEUDO_02900 Predicted protein(s) >gi|222441572|gb|ABXX02000001.1| GENE 1 56 - 742 771 228 aa, chain - ## HITS:1 COG:no KEGG:BAD_0564 NR:ns ## KEGG: BAD_0564 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 228 6 237 237 241 67.0 1e-62 MAKQDKETYDSYEKDVYDNPPAGPMGVHRGARSAASRAMPYVIVIIVALLAGLLFWSIYS GEINNLKMPWSSQESSTTSSAEKSKSGESKSKSQSDSASGNKTDASNADSPTDSQQNDQN ADQNAGQNAEQTDNATAQQAVNTGTEVRVVNATNITGYAQSKADVLTQAGYTSVSASNPT GNVPSQTVVWYQNETDKATAENVAQTLGISNVQQSDGLVTPIVVVLLD >gi|222441572|gb|ABXX02000001.1| GENE 2 911 - 1621 482 236 aa, chain + ## HITS:1 COG:ML1675 KEGG:ns NR:ns ## COG: ML1675 COG0692 # Protein_GI_number: 15827886 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Mycobacterium leprae # 7 234 4 227 227 279 62.0 4e-75 MTQSNIKPLKDLVEPGWANALAEVEPQVHRMGDFLRGEIAAGRRYLPASANILRAFTIPF DSIKVLIVGQDPYPTPGHPVGLSFCVAPDVQPIPRSLTNIYKELTDDLGVPMPTNGDLTP WTNQGVMLLNRCLTVEAGKPGSHQDKGWEIVTDAAIKALNNRRNPDGSIKPLVAILWGRK AQTLGPLLTNAYIIASPHPSPMSARYGFFGSKPFSRANQALIAAGEKPVDWSLPSA >gi|222441572|gb|ABXX02000001.1| GENE 3 1691 - 2707 1065 338 aa, chain + ## HITS:1 COG:PA4322 KEGG:ns NR:ns ## COG: PA4322 COG0714 # Protein_GI_number: 15599518 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pseudomonas aeruginosa # 6 338 8 333 335 255 42.0 8e-68 MPAVTKPSTLPPEDINRAKQLGTCIRARFAQTLVGQDNLRESLITTLVAGGHILIESVPG LAKTTAAQTLATSVSGSFKRVQCTPDLMPSDLVGTQVFDFATQKFSTQIGPIHANFVLLD EINRSNAKTQSAMLEAMAEGATTIGGQCIALPKPFMVIATQNPIEEEGTFNLPEAQMDRF MMKAVMTYPTAQEEQRMLTMLTHRGSDTFDSRTLTGDVVSISDVEFLRAAARRVHVSDAI MKYAVDITATSRGAGTKPVQGLSTLVRLGASPRASIALTRIGQANALMQGRDYVIPEDVK AFTHEVLRHRILLTFEALADGVTSDQVVDSIVQAVPVP >gi|222441572|gb|ABXX02000001.1| GENE 4 2704 - 3657 587 317 aa, chain + ## HITS:1 COG:no KEGG:BAD_0561 NR:ns ## KEGG: BAD_0561 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 317 1 317 317 499 82.0 1e-140 MIDAIRSEDPIRSKIEALGTTLSLPTVRKALGVLEGAHASDKRFGADDVMDIRIYEPGDE AKRIDWKTSARVGRPMVVQRERPSTSRAWLLLDVGQEMTGTCVSGEQVHQVAANALCMFA ALSLRRGDEVSIVFGDSGSITRVPFNGGLTQFEQTLDNALQRDWNKPRNIDALLEYARRI RDRDALVVIATDEHALKERHVESIRRIARTHPMVLIDVATINPFDNSHARDVFDAGSDRR IPAFLRTGKTAQEVRTHREYLSASIRHELNRCGSTVIRADSSERMFREFVRMVSASLSRS TRNQLKAPSSLTLGGKA >gi|222441572|gb|ABXX02000001.1| GENE 5 3654 - 4181 309 175 aa, chain + ## HITS:1 COG:no KEGG:BAD_0560 NR:ns ## KEGG: BAD_0560 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 6 175 4 173 173 220 75.0 2e-56 MNHIALSRNDFDTLDPIHIETGLGIVVAVCLILAVALVVLVVWLSKPTLKPTKKTNRGRH DASTGTSIWHERINDVVDRHANGDLGREEAFALLASIARDFVSTATGSDVRNQTLTDIEA TPRTTGNQHGLTLLRQTIEALYPPEFADAERNHTAREATVEQAGEWVANLVERWR >gi|222441572|gb|ABXX02000001.1| GENE 6 4182 - 5249 741 355 aa, chain + ## HITS:1 COG:no KEGG:BDP_0766 NR:ns ## KEGG: BDP_0766 # Name: not_defined # Def: von Willebrand factor, type A # Organism: B.dentium # Pathway: not_defined # 1 355 1 355 355 531 78.0 1e-149 MELSWHWPWVGLAGLIASLAVIAIMVLASAKRRHNDSGSVRTFSLDDDLNTETASRLFRQ WRTMSRAAVVLLVMALVLAIALVARPSTVDEGEERASSRDIVLCLDVSGSALPYDREVID TYRTLVDNFKGERIGLSIFNSTSRTVFPLTDDYELVSEQLDKTSTILKGVESQDDIDKMK DSDYQAISDWLEGTQNRKEATSLIGDGVVSCAAMLPGFAYGSSNAETASRQRAASIVLAT DNVVSGDPTYTLQEALDLTKQAEITVDGLFSGPQQSESEQTTKQFESEIESHGGVFLTQS NGASVAELVKQIESRRNHDSAASSKAAISDAPGWWTLALAVAIVIWLLLAWRLRR >gi|222441572|gb|ABXX02000001.1| GENE 7 5180 - 6265 740 361 aa, chain + ## HITS:1 COG:no KEGG:BDP_0765 NR:ns ## KEGG: BDP_0765 # Name: not_defined # Def: von Willebrand factor, type A # Organism: B.dentium # Pathway: not_defined # 23 361 1 339 339 494 78.0 1e-138 MVDAGIGSGDSDLAALGLEVEAMTNLTLSPALGWPLGTAICVIMLVCAVAQIVLHIRRRS QSDETVWACARRSMICALVAIMALTPSIVSSTNSRAINTTDVVVAVDVTGSMAVADAQYG SDEQLSRLDVAKQAVKDIAAMYPNSSFAALRFGASGTLDVPLTPDSKAIDNWADTLAPES TSISAGSTLDVPIDQLLLTCKSIHDQHPDDAIVLYLISDGEQTSSKTRRTFSSLRRYLSD AFTVAVGSEQGGNIPVTGDGVEEGDTQWVTDPETGEPGVSRMNADEMNAIADELSGTAIQ LNATTTMSGGDSKEASSKWRVTQTSKQRTRTVAMVWPFAIAVALLLTFEAGAWITQSRRL L >gi|222441572|gb|ABXX02000001.1| GENE 8 6262 - 6828 569 188 aa, chain + ## HITS:1 COG:no KEGG:BAD_0557 NR:ns ## KEGG: BAD_0557 # Name: ebpS # Def: cell surface elastin binding protein EbpS # Organism: B.adolescentis # Pathway: not_defined # 3 188 4 190 190 137 54.0 2e-31 MSTTVTARASLPVRIAIAVIAAISVIVGVLGIVNLASVSNYNQATDSLNANIKASQQQDA DFDKLQTQQQQTDAQFREAGAAGMLLLPNVRTSIEHNAEVSAKLTESIRKKIEEMQHADG TEADTAIEGGQSVTDGGQGNGGTLTDEQRQKVEELLAQNAQSAQSDSDDSGSAAKQDSNQ TSSPAKPW >gi|222441572|gb|ABXX02000001.1| GENE 9 6965 - 7306 146 113 aa, chain + ## HITS:1 COG:no KEGG:BAD_0556 NR:ns ## KEGG: BAD_0556 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 20 113 16 109 109 100 59.0 2e-20 MCSNIAMNASITYPFIPGLGFNLINTLASTPGMPCHCRAGVRTTQLLVNAKLTSISKHLD DLDATLASSSLPDWTGTAAESYRARLDELRKQSLTLRDSINATLRLLWAVGAA >gi|222441572|gb|ABXX02000001.1| GENE 10 7303 - 8784 1080 493 aa, chain + ## HITS:1 COG:no KEGG:BDP_0761 NR:ns ## KEGG: BDP_0761 # Name: not_defined # Def: esterase/lipase # Organism: B.dentium # Pathway: not_defined # 181 493 1 312 312 456 75.0 1e-126 MSWEVTAKVSGGCKYSTEETEAYMRAAKALSHQADALNRAHDSVRALSLQLSSYPYASSA IASLSGSSPYCNATDHIELPYDQLVEQCDAHASALGAMAARLSELSALIIRAQSLYSQVD DAGRRTLNELLQVAITSFPKESILAGAAMSALGYVMGSTNEGKSNPIYLLDSLDWAQEGI MSAAGAAVSGYGKAKGLLRTDEVNHAAGTISKASSRGYNLIQGNNLTVTQVHPKTEVVRE SHNVGEAMEDLRRLAEERLGKTDLDSGLDYGTIAISKYRKSDGTNSWLVTIPGTDGKHDS PFGWPQNVELMSSDSKQRMEADSARMVQEAMKQAGIKSNEPVALIGHSQGGIVAATIASD LKDDYDIEHVVTAGSPVANHPIPEKTWVTSVEMDDELVAALDGAANPSSDHWLTVRGTAS KSSSNQESTFAGTPVTDAPDNKEITHWLKYHQAAYQNATDMGSTAVNTHERHFDEIIDGD LQEVMYFEGRMSK >gi|222441572|gb|ABXX02000001.1| GENE 11 8901 - 10343 1972 480 aa, chain + ## HITS:1 COG:VC1126 KEGG:ns NR:ns ## COG: VC1126 COG0015 # Protein_GI_number: 15641139 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Vibrio cholerae # 5 477 2 454 456 391 44.0 1e-108 MKLTDISPAIALTPLDGRYHQQTAPLVEYLSEPALNRERMRVEVEWMILLANGFEGNGNQ TIVPGVKPLTDEEQAFLRAIPEEFGAEGIAQHAAHEAKTHHDVKAVEYYIDDQLDKAADV LGHDTQLTGLKTLVHFACTSEDINNLSIARCVKNGIENVWLPGAQAIVDHLAQKAEEYRD KAMLSLTHGQPATPTTLGKELAVYVYRLNRQLNKVRAQEYLGKINGATGTFGAHLAACPD VDWVDVSREFVTNRMGLTWNPLTTQIESHDWQAELYGTISHTNRILHNLCVDVWMYISRG VFAQVPVKGATGSSTMPHKVNPIRFENAEANLEISCSLLDTLSATLVESRWQRDLTDSTT QRNIGSALGYSVLALNNLMGGLNSIHPNDIAIEAELDSNWEVLGEPIQTAMRACELAGLP GMDKPYEKVKELMRGHEISKEAVEQFIDQQAFDDATTARLKALTPATYTGVASKLVDFDH >gi|222441572|gb|ABXX02000001.1| GENE 12 10486 - 12921 2182 811 aa, chain + ## HITS:1 COG:Rv0585c KEGG:ns NR:ns ## COG: Rv0585c COG0392 # Protein_GI_number: 15607725 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 22 811 19 795 795 169 26.0 2e-41 MSHSPAVNKPAPHIDDVPPKRSRDFADLTHAFFALVLGIGVILFSVYLHGTASGVESDVH SAGRVVSWLMDVPSALLQQLAIVCITVSVLIQLLTSKEWLQSVISVVSLIFGFFAVWGIS ALISNSGNTMLIIPLQSNSTSVGTGLLPDFYAAMASFLTVSGPRRIRSCTKWGWNVLYAV AVLMVVLSWNSLAGVIASYAIGRVIGMLIRFAIGTQNNGAWGSQIAQSLRSIGIDTSLLT RRVAPYVDSGVLKATLDDDLTENSRIYDVVDYDGKQYTVSVLDNQVHAAGYLNQVWQWLR LTGVSMRRDRSSVDAMHHHYAMILGLSNAGLETPRVYGVADYGESSILVFHRNRMPLECN QNTMSDHDMEAFMEYLTTAHHHGFTHRRITPETLSRMENGHPVIAGWHNGDYGSSAPNFA LDKVQLLVLLATLNGNDRAIACARRTWGDEQLIDLAPFIQKAAIPASTRALPGWDKHVLT DLRTRISALAPQDVADSMEKVTLSRFSLRSFIAIALLVVAVYVVFTQIQPAEMIKAVRDA NLAMALVCVALGFVAWLGSAITLGVFMDSDKRNTIGLYCSQMASGFTAVSMPAGVGPAFV NLQFLRKSGYRSTAATAVMSAVWAVQGGTTIVLLLTIGLFTGRNTLSGMIPTNTLIMVIA IVALVVSAAMAIPPVRHLVTEKYLPVVKAYARNLVNVLARPKELALGIAGALVLNLATGL GFWAALMAFGYHTNPAETTFIFLLANTLGSAVPTPGGLGAVEAVLSVAFTAVGIPSSIAV SATLVYRIAFYWLRIPVGALAMKWLDMHNLI >gi|222441572|gb|ABXX02000001.1| GENE 13 12855 - 12992 66 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFYKGFGRFFENQGENKVYGGVCQIKLCMSSHFMANAPTGIRNQ >gi|222441572|gb|ABXX02000001.1| GENE 14 13075 - 13356 507 93 aa, chain + ## HITS:1 COG:L102317 KEGG:ns NR:ns ## COG: L102317 COG0776 # Protein_GI_number: 15672484 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Lactococcus lactis # 4 91 3 90 91 66 48.0 2e-11 MAYNKSDLVSKIAQKSNLTKAQAEAAVNAFQDVFVEAMQSGEGLKLTGLFSAERVKRAAR TGRNPRTGETIEIPATYGVRISAGSLLKKAVTK >gi|222441572|gb|ABXX02000001.1| GENE 15 13503 - 13862 332 119 aa, chain + ## HITS:1 COG:no KEGG:BAD_0551 NR:ns ## KEGG: BAD_0551 # Name: not_defined # Def: MarR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 119 1 119 119 131 66.0 1e-29 MTDQRKEVINQLHELNILLLHTKLKATRTQTALRAATRVCNVEAARRGVPPLQQLPKSHD TATHMLDCLSTEDLSTLSELLQRIIDNTDTRILDEEVVERRKAIHEFLMLNHTDTEVQE >gi|222441572|gb|ABXX02000001.1| GENE 16 13859 - 14659 749 266 aa, chain + ## HITS:1 COG:no KEGG:BAD_0550 NR:ns ## KEGG: BAD_0550 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 265 1 265 266 382 89.0 1e-105 MSDEQETIPEANAPKPIRIDKRSLFTPSEAVAVEQHSTTPHVSRTRYGTARIEGRLSSPN ARVPAVISQHCGGITVKGHTLKSFAYTTDAAIIRNTNANAILAVYPFTGEPVITQALLTV AQMPLFVGVGGGTTTGPRVTELAMVAEMQGAAGVVINAPAPAETIETTMSMVDIPVIATV TEDDEITECKILAGAAIINVAAGARTAQVVASIRAHHPEIPILASGGGSEDRILATIEAG ADAITWTPPSAQQLQSQMMAKYRGEA >gi|222441572|gb|ABXX02000001.1| GENE 17 14800 - 16266 1058 488 aa, chain - ## HITS:1 COG:no KEGG:BAD_0549 NR:ns ## KEGG: BAD_0549 # Name: not_defined # Def: proteasome-associated protein # Organism: B.adolescentis # Pathway: not_defined # 1 488 1 488 488 754 76.0 0 MPQLRDSGNHSSSPLDAGTLREVHSFARIFGIETEYGVSVTGADVPCDASQTAMMMFQPI VASARSTNTYIENGSRLYLDVGSHPEYATSEACDPMDALAVDAAGELVMRDLALDAQQRL RATHGPRATVHVFKNNVDSAGHSFGCHENYLVRRFVPLDVIEHELLPFLITRQLFTGAGR VTESGFQITQRADFLDEAVSSATTRSRPMVNTRDEPHADPDAFRRLHVIIGDSNRSQWAT MMKLATTHLVLCVIEQAGREGRESGFSRFAFADAGAANRAVSRDMSGVNASFAMADGSTL QGGAVAMQERYLQAVEQFVDEHPEVASSLPRTDVHDVLRQWRNTLEAFRSGNANALGDRV DWVCKYRLFEALRARSSADLPLSKLEQLDLDYHDVANGALYASLLRRGALRSLIDGREAQ KARTMPPADTRAALRGRFVSAAKSHGAQYSCDWTRLSLHAPRKMDMVLLDPFQCRENEDF QAMIGALE >gi|222441572|gb|ABXX02000001.1| GENE 18 16266 - 16457 325 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225350748|ref|ZP_03741771.1| ## NR: gi|225350748|ref|ZP_03741771.1| hypothetical protein BIFPSEUDO_02317 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02317 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 63 1 63 63 78 100.0 2e-13 MPQEFEQAQSASAGQEVGDIVESAGVQVDGTADALDAVLDDIESVLESNAEEYVGSFVQK GGE >gi|222441572|gb|ABXX02000001.1| GENE 19 16544 - 17374 988 276 aa, chain - ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 83 264 81 246 261 89 32.0 6e-18 MELRQIALEVARILQDAGKHALNDQMNPHDMRKLEVSEDCFHFTSDTDKRLQQFISNRLT YVNVFDGFWQLRPEQCYPGQRYWCVGGIDGVINFARSMPEWAITVTLFEFNDQCSAQPIL SIVHAPALGLTYLAVRGSGAIRIRKTPLGDKREKIIPSTTSSLDGSVVSFGMSPVSSESQ RALDVVAKIAGRPADIKRVGPASLDLCKVADGTYDAYFEPHLHEWDVPAVSAGAVVIWEA QGHLTQWNGESVHWRQENDVMATNGLITNDLSQYLA >gi|222441572|gb|ABXX02000001.1| GENE 20 17507 - 19090 1105 527 aa, chain - ## HITS:1 COG:no KEGG:BAD_0547 NR:ns ## KEGG: BAD_0547 # Name: not_defined # Def: proteasome-associated protein # Organism: B.adolescentis # Pathway: not_defined # 1 527 1 527 527 842 80.0 0 MSVRRIMGTETEYAVSALGMEHYNPVKLSFDVVGAAANEQTKHIRWDYRQEDPVNDARGT RLERASAHPDLLTDAPQLNITNVIAVNGGRVYVDHAHPEYSAPETDDPFDAVLYDHAGDL IMRECARKASEQTGIAIALHRNNVDGKGASWGTHENYMMLRSVPFDQVAKLMTAHFVARQ IFTGSGRVGIGERSETAGYQLSQRADYFHMKVGLQTTFDRPIINTRDESHSTDAYRRLHV IVGDANRMDVPQALKLGTTSMLLWLLEHAEEAGLNIDEALGPIMLADPVSAMHEVSHDLT LGAMLPLEYGGETSAWQIEVTLRGLVYAAAAVIYGTDTSGEPAWSDRSTRNIMAMWGQAL ADVAAIRHADDDARLTMREQAGRIEWLLKWQLLEKLRRKIGSGWDDARIAAVDLKWAAID PADSIFDRLRAQTERLVTDEQLEQASVEAPSDTRAWLRAEMIRRFPEQVVAASWSHLTVR HRTIGDNTVENPMVSLDMSDPLKYSKSQCSRYCERVQDAASILEMLR >gi|222441572|gb|ABXX02000001.1| GENE 21 19134 - 20678 1584 514 aa, chain - ## HITS:1 COG:ML1316 KEGG:ns NR:ns ## COG: ML1316 COG0464 # Protein_GI_number: 15827684 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Mycobacterium leprae # 16 511 64 585 609 406 47.0 1e-113 MDQRDETLASLGEANDQLMAKNHALAKALSRATQELTKAKAQLNQLAGPPMTFATMVRVH SSRTDEQGVQHASAEVISGSRRMIVPVAANVQASRLEAGRTVLLNENMVVVSQAGTDAVG AVRTVKQVIDDGRLLVADGGGNVALVRRSGALSKTSINVSDRVTVDSSMRFALALVPAQD DADLVLEEVPDVTFADIGGLDEQIERIRDAVQMPFLHRELFERYDLKPPKGVLLYGPPGN GKTLIAKAVANALAEGAAGGRGVFLSVKGPELLNKFVGESERLIRMIFKRARERAADGKP VIVFIDEMDSLLRTRGSGVSSDVETTIVPQFLAELDGVETLGNVMVIGASNRIDMIDPAV LRPGRLDVKIRVERPKAAQAAQIIRHYLTDDLPLVPGVDAKALIGVLVSDIYSTDEHRYL CDVCDEHGQWHPIYLADVVSGAVLKNIVDRAKTRAVKISIESGQPAAIGVDLLAKAVDEE FLETRDAVLDANPEQWSRINGLEAGRITRIRPVE >gi|222441572|gb|ABXX02000001.1| GENE 22 20812 - 21486 631 224 aa, chain + ## HITS:1 COG:L0085 KEGG:ns NR:ns ## COG: L0085 COG0560 # Protein_GI_number: 15672587 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Lactococcus lactis # 15 223 1 209 216 245 55.0 4e-65 MLEQESPNIAPTPTLSQPGLLVMDVDSTLIDEEVIDELGAAAGIGEQIASITARAMNGEL DFREALQARVALLKDLPTSVFDDVYRRVHFTQGALDLIDALHAHGWKVGVVSGGFHEVVD RLAADAHLDFWIANRLEAADGCLTGHVLGDIVTKDVKLQSLRDWASRMGISMGQTVAVGD GANDLPMIHAAGLGVAFCAKPAVQADAPHRVNERDLTRILDFLR >gi|222441572|gb|ABXX02000001.1| GENE 23 21624 - 22586 1067 320 aa, chain - ## HITS:1 COG:ML0552 KEGG:ns NR:ns ## COG: ML0552 COG0223 # Protein_GI_number: 15827204 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Mycobacterium leprae # 1 317 2 314 318 231 45.0 2e-60 MLKVLFAGTPDVAVPSLKMLAEDTERFEVVAVLTRPDAPTGRGRKLVPNPVKQAALDLGL PVIESDPSEETFISELAATGAQAAAVVAYGKILKQDVLDALPMGWYNLHFSLLPQWRGAA PVQRSIWAGEKVTGATVFRIVRAMDAGPILAQSTVEIGAHETAGELLNRLAEDGSRLLAA SLQAMADDQIAPVEQPAGAYEVAQKITVEDAHIRFDIPVFAVDRQIRACTPNPGAWCELH ANAEAEPATLHVLRAQGADMSNPNTPVSLEPGRIVAGKKNVWVGTSSDPLELLEVKAQGK KAMRAADWARGAHLDGAYCK >gi|222441572|gb|ABXX02000001.1| GENE 24 22683 - 23393 1057 236 aa, chain - ## HITS:1 COG:CAC3581 KEGG:ns NR:ns ## COG: CAC3581 COG1011 # Protein_GI_number: 15896815 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Clostridium acetobutylicum # 29 230 2 201 201 87 27.0 2e-17 MKGWPGEPDMEYDVLMADGEAAVNAGKPITDVIFDFGNVLVYWDPVAVMTPRYSDELVEQ FLDNDISGFYDINDELDCGMSNDDGVALMRERYGDKWADMLQYYLDNFVDSLTGVVPGAR VLINDLKAAGVRVWGLSNWQKDLFPIALDNFDILRSLDDRVVSGYVSLRKPNKDIYEFAL QQFGIDASGAVFVDDKAMNIVGANNAGIRGVRFKDSRALRALLIDAGVKIPAVHQA >gi|222441572|gb|ABXX02000001.1| GENE 25 23472 - 25703 1281 743 aa, chain - ## HITS:1 COG:Cgl1564 KEGG:ns NR:ns ## COG: Cgl1564 COG1198 # Protein_GI_number: 19552814 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Corynebacterium glutamicum # 27 739 5 684 688 231 27.0 3e-60 MSTEDAEQLALDGLAPRKRRKRAPAVKTPAAEHPIAQVVLDIQAIHLGQTFDYYVEEKYS EAAQPGVMVRVRFGGQRVNGIIWKRTDTSETPESSLRFIERVVIDRVLVSESMRNDATLI ADAFGGTRANILRLAVPPRVARVEQEQRIGNRTGIEKNGRIESLAKIERESYEQLQRQYG NIDLLRTALEGQRFQAFVLDPLPGSHHWRQCVAWMVAAALLQGKPAVLVLPTMREIEDMA ETLQSIGLRCFAPTQSSNGAYGGDFAILNAQMAPAERYRAYLAISGGQVRCVIGTRAAMY APVDGNALFLILDDVCYQDADGMMPYANARGVLRLRAKAHNGVFVAMANARSVQSQWETD AAHVGATQVSGFSTPIHAFPAVTKEASPWIRWLNRDELARLADSTIGARVPHTAVRVLSK ALESGPVLLSIPQDGIGEALSCAKCHRQARCSYCTGPLERLRDGSVRCRWCGVATVQWAC PACHNERMRVVRVGAAGTAQELSRLFRGVPIVLSTPSQPRGIVPDIGFAPQLVIATPGAE PRVRGRNPSECEYRAVAILDAWTSLYAFGIDAGVDTLTSWMRAVSLCAPRIRGGQALLIG ETDPTLAQSLMLWNSTLLAQTELREREQTALPPVFAAACVWGRRDAVKVTLERIGALGGG DLSAIETTEGMLPSVLGPVPIPQPRTIDSRELEGTADRVKAVVRVPQSRRGELALRLRSA SARHVAAREPGELRFQLDPKERI >gi|222441572|gb|ABXX02000001.1| GENE 26 25718 - 26932 1457 404 aa, chain - ## HITS:1 COG:Cgl1565 KEGG:ns NR:ns ## COG: Cgl1565 COG0192 # Protein_GI_number: 19552815 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Corynebacterium glutamicum # 4 403 7 405 407 483 64.0 1e-136 MAELKLISAESVTEGHPDKVCDQISDAILDDMLAQDPQSHVAVETCATVGQFFVFGEVTS EGYSDIQSIVRSVVRNIGYTSSRVGLDADSCGVTVSLTEQSSEINQGVARLSGEAESKAS REQRYEAQGAGDQGVMFGYACDETDVLMPLPIYLAHRLAYRLTEVRKNGEVPHLRPDGKT QVTIEYDEHDAPVRLDTVLVSTQHDPQVDQAWLKEQLTEHVIRPVLDDVLADRVAHDEYR VLVNPTGSFVLGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAARWV AKNIVAAGLAHKVEVQVAYAIGVADPVSINVETYGTENGVTREQIQQAVRKVFDLRPAAI IDELDLKRPIYSKTAAYGHFGRNDADFTWETTNKVDELKAAIEG >gi|222441572|gb|ABXX02000001.1| GENE 27 27028 - 27189 103 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDYSKRTAQISGRMKTWNPVLIARTVTSVAFGQIVFAEGLFKQTIIDLTESDG >gi|222441572|gb|ABXX02000001.1| GENE 28 27109 - 27393 452 94 aa, chain - ## HITS:1 COG:MT1435 KEGG:ns NR:ns ## COG: MT1435 COG1758 # Protein_GI_number: 15840849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Mycobacterium tuberculosis CDC1551 # 2 87 48 133 133 102 62.0 2e-22 MAFGTQPTPTGLAEPPIDDLMEHADSKYALAIFAAKRARQINSYFTQLNEGLLQNVGPLV EYQNQEKPLSIAFREINDGLLEETLGEDDLTEGN >gi|222441572|gb|ABXX02000001.1| GENE 29 27612 - 29465 2434 617 aa, chain + ## HITS:1 COG:HI0738 KEGG:ns NR:ns ## COG: HI0738 COG0129 # Protein_GI_number: 16272679 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Haemophilus influenzae # 1 610 4 611 612 753 59.0 0 MRSAKLMNGRVFAGARALYRAAGVDGKDFGKPIIAIANSFDEFLPGHVHLNKVGRLISEA IKEAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQVNAHCADALICIPNCD KVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLPDGTVKKNTDLIDVMYASADDNLNEEDL LAYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAEQIVK IAKQYYDDDDETVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDI ERISHTVPCICKASPSGEWEISDVHRAGGITGILGELDRAGKLHRDVHSIDYKTLEDKLN DWDIMRDTCTEEAKQMYLAAPGHIVSPDPWTHTTLFDSLDRDRVNGAIHDIDHPAVTEGG LAVLRGNLAPDGCVVKTAGVPKEIWTFRGPALVVESQEQAIEVILNDTLKPGMALVIRYE GPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHIAPEAANKGPIALI KNGDIINIDIPNRTVNVELSDEELAQRRTELEAGDGYVAHRDRKVSQALKAYAAFARSAD KGATRDPELINKLSGLA >gi|222441572|gb|ABXX02000001.1| GENE 30 29613 - 30200 501 195 aa, chain - ## HITS:1 COG:Rv1389 KEGG:ns NR:ns ## COG: Rv1389 COG0194 # Protein_GI_number: 15608528 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Mycobacterium tuberculosis H37Rv # 7 189 21 200 208 160 48.0 2e-39 MTDSQHGRLIVLCGPAGVGKGTVLGRVREQHPEIWLSVSATTRQPRPGEVDGVNYFFMPE QEFLDKEAAGEFLETADVFGLAHYGTPVKPVVEHLERNIPVILEIDIQGARSVKQRAGEL GIEVMTVFIAPPSFEELERRLIGRGTETPEQQAKRLETAKIELAAESEFDKVIVNNVVDE AADELWNLIATEFDL >gi|222441572|gb|ABXX02000001.1| GENE 31 30273 - 31214 887 313 aa, chain - ## HITS:1 COG:Cgl1570 KEGG:ns NR:ns ## COG: Cgl1570 COG0284 # Protein_GI_number: 19552820 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Corynebacterium glutamicum # 16 290 3 271 278 143 34.0 5e-34 MSSLSSEEMSAQRSDFGLRLSNSMAQYGPLCVGIDPHRQLLTDWGYNVDALGAELYSMRM LQAANGRAAAVKFQFSMFERYGSKGIAALERVLYAARQMGIITIVDCLHGGLPTTVSAFA DVYFKPRSPLLADAITLLPYYGARSLGGVINDALNNGRGVFIASLTSNQEGASLQTAIRQ AGEYKGRTVAYGIASTAQKFNKGNDGMGSVGLIIGATIGQWINDSGVDPAKFTGPILSPG YGWQGAETRDLKTVFKGTKGNVLVTVSRFIATHGPDISSLAAATESVALDIRQALIEAQN EVDDEILDDEEDE >gi|222441572|gb|ABXX02000001.1| GENE 32 31217 - 34597 4312 1126 aa, chain - ## HITS:1 COG:MT1428 KEGG:ns NR:ns ## COG: MT1428 COG0458 # Protein_GI_number: 15840842 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Mycobacterium tuberculosis CDC1551 # 1 1114 1 1105 1115 1277 61.0 0 MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM ADATYIEPISTPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL EAIDRGEDRELFKKVVEEAGAESARSDIAHSIEEVDKIAEKFGYPLVVRPSFTMGGLGSG IAHDEEELHRIAGAGIHYSPTDEVLIEEGIEGWKEYELELMRDKKDNVVVVCPIENVDPV GVHTGDSITVAPVFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAINPNTGRIIVIEM NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITQSTPASFEPTIDYVVTKVPR FAFEKFPGADPTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHMGFNWDGDKPDVQEV EQLLEAIKVPTEHRYLQIQRALWGGATEQQIFDATKIDPWFIRQFVLINETALEIKEASK LSRKLLKKAKLAGLSDLQIAHLRHLGDEGENTIRELRWSYDLRPVFKTVDTCAAEFDAVT PYYYSCYADESELRPREREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG VPILGTTPESIDLAENRELFGEVLKKAEMNAPRYGTALSLDEAREAAHNIGYPVLVRPSY VLGGRGMEIVYDDAQLCKYVDRALKEAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFD GEELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAIAKGCGVQGLINVQ YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIQQQRDNGLLLPHGDG GDIRRGQQVAVKESVLPFKRFRTPLGKTVDVLLGPEMRSTGEVMGFDRDFPHAFAKSQLA AYDGGLPTSGNVFISVNDTDKRQLPLFAARLVELGFNIWATEGTASVLRRYGIESKIVDK ISVRMDSNPDDPITTYHAEGSVGKNVVQLIEEGAIDLILNTPNSRGSRSDGYAIRSAAIA ADLPQFTTMTEFSAVLMAIEAVRNNDYQIMSIQDHSQQLFELESRE >gi|222441572|gb|ABXX02000001.1| GENE 33 34590 - 35807 1220 405 aa, chain - ## HITS:1 COG:ML0535 KEGG:ns NR:ns ## COG: ML0535 COG0505 # Protein_GI_number: 15827191 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Mycobacterium leprae # 16 399 4 375 375 436 58.0 1e-122 MNQYDSEAVMFDPQDAVLVLEDGQVYVGEPYGAIGTTSGEIVFATGMTGYQETLTDPSYD RQIVVQTFPHIGDTGINGEDPESSRIWVAGYVVRDPSPNVSNWRATGSLDDDLESNHIVG ISRIDTRKLVRHLRSAGVMRAGIFSGDALLDANGKLRTIESMLDEVKSTPQMKGMSLYDE VSTKEAYTIEPCGEFEGKEPLFTVAAVDLGIKAMTPHRMAERGCRVHVVPSTITFDELEA LNPDGVFFSNGPGDPEQADPEVNLLRQVLDAGHPFFGICFGNQLLGRALGFGTYKLKFGH RGINQPVKDMTTGKIEITAHNHGFAVDAPIGETVDAPFENGKYGKVFVSHIDLNDNVVEG LQCVDIPAFSVQYHPEAAAGPHDAAYLFDRFVDLMRSAKEGTHNA >gi|222441572|gb|ABXX02000001.1| GENE 34 35895 - 36338 503 147 aa, chain - ## HITS:1 COG:ML0523 KEGG:ns NR:ns ## COG: ML0523 COG0781 # Protein_GI_number: 15827185 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 2 128 7 136 190 101 42.0 5e-22 MARSTARKRALNTLYEADEKGQDILSLLAERIEQPGAQTPLPEYAIEIVRGVAEHIAAID STLDEHSTGWKVKRMGVVDRNILRIAAWEIMFNDDVPNMVAIDEALGLAKTLCDDESPAF IHGLLSAVSADADAAQVDEQPTEPSAE >gi|222441572|gb|ABXX02000001.1| GENE 35 36361 - 36924 785 187 aa, chain - ## HITS:1 COG:ML0522 KEGG:ns NR:ns ## COG: ML0522 COG0231 # Protein_GI_number: 15827184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Mycobacterium leprae # 4 187 3 186 187 250 67.0 1e-66 MAQTTNDIKNGSVLNLDGQLWAVIKFQHVKPGKGPAFVRTTIKNVLSGKIVDKTFNAGMK MEFETVDNRNLQYSYEDGDNFVFMDMTTYDQIYIPKTLVGDQAKFLLEGTDCVVSFHDGT PLSVELPASVILTVTHTEPGLQGNRSNAGTKPATVETGAEIQVPLFIGEGEKVKVNTTDG SYLGREN >gi|222441572|gb|ABXX02000001.1| GENE 36 36882 - 37046 113 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFAEGGFPIYGRLTDKVCTPWHNEQGSFKLSLLDEEIGELIWHRLPMTSRTVPS >gi|222441572|gb|ABXX02000001.1| GENE 37 37106 - 38305 1290 399 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 399 1 407 407 501 63 1e-140 MAKEKYERTKPHVNIGTIGHVDHGKTTLTAAISKVLHEEYPDINPAYDFNQIDAAPEEQQ RGITINIAHIEYQTAERHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTRE HVLLARQVGVPRILVALNKCDMVDDEELIELVEEEVRDLLDENGFDRDCPVIHTSAYGAL HDDAPDHEKWVESVKELMKAVDEYIPTPTHDLDKPFLMPIEDVFTISGRGTVVTGRVERG KLPVNSNVEIVGIRPTQTTTVTSIETFHKQMDECEAGDNTGLLLRGINRDQVERGQVLAA PGSVTPHTKFEGEVYVLTKDEGGRHSPFFSNYRPQFYFRTTDVTGVITLPEGVEMVQPGD HATFGVELIQPIAMEEGLTFAVREGGHTVGSGRVTKIIE >gi|222441572|gb|ABXX02000001.1| GENE 38 38475 - 40604 2961 709 aa, chain - ## HITS:1 COG:ML1878 KEGG:ns NR:ns ## COG: ML1878 COG0480 # Protein_GI_number: 15828005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Mycobacterium leprae # 4 709 5 701 701 974 68.0 0 MALDVLNDLNQIRNIGIMAHIDAGKTTTTERILYYTGKNYKIGETHDGASTMDFMAQEQE RGITIQSAATTCFWNRQTHDEKQKFQINIIDTPGHVDFTAEVERSLRVLDGAVAVFDGKE GVEPQSETVWRQADKYGVPRICFINKMDKLGADFYYSVDTIKTKLGATPLVVQLPIGAEN DFAGVVDLIRMKAYVWNDVSGDMGAHYDTTDIPADLQDKAEQYRAELLDQVAESDEELLE KYLESGELTEDEIRSGIRKLTINREAYPVLCGSAFKDKGVQPMLDAVVDYLPSPEDVPSI VGFDPKDESIEIDRKPTTDDPFSALVFKISTHPFYGKLVFVRVYSGAVTPGDTVLDSTKG KKERVGKIFQMHADKENPVDAAEAGNIYTFVGLKNITTGDTLCDEKAPISLESMTFPDPV IEVAVEPKTKADQEKMSIALAKLSDEDPTFQVKTDEESGQTLISGMGELQLDIIVDRMRR EFKVECNVGNPQVAYRETIRKAVMNQEYTHKKQTGGSGQFAKVLMNFEPLNTEEGETYEF VNEVTGGHITKEFIPSIDAGVQEAMESGVLAGFPVVGVKATVTDGQVHDVDSSEMAFKIA GSMCFKEAAPKAKPVILEPIMAVEVRTPEEYMGDVMGDINARRGSIQSMTDSTGVKVIDA KVPLSEMFGYIGDLRSKTQGRAMFTMQMDSYAEVPKNVSEEIIKAQRGE >gi|222441572|gb|ABXX02000001.1| GENE 39 40635 - 41105 782 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224283422|ref|ZP_03646744.1| 30S ribosomal protein S7 [Bifidobacterium bifidum NCIMB 41171] # 1 156 1 156 156 305 99 2e-81 MSRKGPSKKHQLLPDPIYGSTVVAQLINKILLDGKKSIAEDIVYSALDMVKEKTDQEPVA VLKRALDNIRPSLEVRSRRVGGATYQVPVEVKPARANTLSLRWLTDFSRARREKTMAERL ANEILDASNGLGASVKRREDTHKMAEANKAFAHYRW >gi|222441572|gb|ABXX02000001.1| GENE 40 41111 - 41482 622 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025548|ref|YP_909393.1| 30S ribosomal protein S12 [Bifidobacterium adolescentis ATCC 15703] # 1 123 1 123 123 244 99 6e-63 MPTIEQLVRKGRQAKPKKSKTLALKGSPLRRGVCTRVYTTTPKKPNSALRKVARVRLSSG VEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDTQGVKDRKQGRSLYGAK KAK >gi|222441572|gb|ABXX02000001.1| GENE 41 41589 - 42062 33 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225350772|ref|ZP_03741795.1| ## NR: gi|225350772|ref|ZP_03741795.1| hypothetical protein BIFPSEUDO_02341 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02341 [Bifidobacterium pseudocatenulatum DSM 20438] # 112 157 1 46 46 91 97.0 2e-17 MAHPSLTVALLRVMQSSSGISQPARLSHKACRWHTRIISIRIPKTFQHAVSQIAKGMAPD PFESGAIHSGRRFPLLCYALPYAHSSVSLSVLHLRPGACAVLPHCRCFESLLFSYILKAL RMNLTAIGASLRPDEFSTDPQLRPSVTVYPKTNKKHG >gi|222441572|gb|ABXX02000001.1| GENE 42 42227 - 43267 1280 346 aa, chain - ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 1 327 1 318 321 245 44.0 8e-65 MQKVKAFGDWLTKWFTAIVIVWAVFNYFVPQASLWGKSYTGYFLGIVLFGMGLTLTLDDF RRILTQPLMVIVGTVAHFVIMPLVAVLLCWIFRLDGALAVGVILVGCCPSGTSSNVMSYL SRGDVALDVSIGILSTLCAPFMIPLLMQWLASQYVSVPVESLFLNAVKVVLFPIALGVIC HAIFGEKIEKITVALPIVSQVAILLIIGVVVAANGPKLFVASSLLAIPVVILHNLCGYAL GFGFSKLMYKVYPKGFRYAQQKAITFEVGMQDSALGATLALTSFASNPLAAVPSTFFSVW HNISGSVLSSWWREHDDRHQIHPDSDNGEKGSAAKAREDAAETANS >gi|222441572|gb|ABXX02000001.1| GENE 43 43729 - 44754 1362 341 aa, chain + ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 1 341 1 341 341 374 52.0 1e-103 MLSFENDYSCTATPEIIERISEIAQNQYPGYGNDSICESAKAKIREACACPDAQIFFLVG GTQTNQTIIDSITPQYAGVIAASTGHVNVHEAGAIEFTGHKVLTLPHHDGKIDATELDEY CATFYADGNYTHMVFPGCVYISQATEYGTLYTLAELEAIRKVCTKYDMPLFIDGARLGYA LTATGNDVTLEDIARIADVFYIGGTKVGAMFGEAVVFTHGNMPKNFVTLVKQHGALLAKG WLLGVQFDTLFTDDLYCRIARHANDAADRIREVLVERGYTLTFDAPTNQIFITLDNATSE RLQRNVRLGFMEKADDTHTVMRICTSWATTDEQVEQLIALL >gi|222441572|gb|ABXX02000001.1| GENE 44 44887 - 46068 1021 393 aa, chain - ## HITS:1 COG:HP0421 KEGG:ns NR:ns ## COG: HP0421 COG0438 # Protein_GI_number: 15645049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Helicobacter pylori 26695 # 13 388 1 380 389 234 34.0 2e-61 MSETEQEETQRPLTIAMVVDTSGNRGNGTSNSALQWAEELKRQGHTVRLVGIGAPEYPAR VNHVPLVSWVAKKQQMQFAEPSDTLFRTAFRGVDVVHIYTPFRFGQHACKVAKQMGIAVT AGYHVQPENITYSAGPLKYIPGIDKFIYWLFNLWLYRKIDHVHVPTELGASLLRSHGYKS KLHVISNGYESRFTAKTQRDAGKSAPVPFHIVASGRLTNEKNHVALIHAIARCRHAQDIE LTIAGTGPLKKKLQRLAARLLSRPASIGFHKNTEMPALLRSGDLLVHPSIADLESVSVIE GMAAGLVPVIASSPLSAAGQFALRDESLFPVDDVEALARRIDWWVDHPDELSKWGEIYAE HTKEHYSVAASVRKFVAMEREAIADNANKQINA >gi|222441572|gb|ABXX02000001.1| GENE 45 46095 - 47357 1274 420 aa, chain + ## HITS:1 COG:VC1228 KEGG:ns NR:ns ## COG: VC1228 COG0027 # Protein_GI_number: 15641241 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Vibrio cholerae # 11 417 4 391 393 349 49.0 5e-96 MEGMTEENRALGTPLGKHPTRVLFLGSGELGKEVALELMRLGAWVCAADSYEGAPAQQVA HEYRVLDMANAEQLRVLFDEIQPDIIVPEVEAIATSELAAAAERGAQVVPSAEIASICMD RERLRVLAHEELGLPTTPYRFAGSLEELRAGAKTVGYPCVVKPIMSSSGHGQSVVRSADA IDAAWVEAQEGRRAHDEGDVSRVIVEALAPLDYELTVLTVSSSAGIVTCAPIGQRQESGD YRESWQPASFTQDVLAQAQRIACTAVEGLVAKAKASDEKGWGVFGVELFVLTDGSVLFNE VSPRPHDTGMVTMASQRLSEFALHARAILGLPITQEHVALSIPDGAVAASHAIVIQGDGE AEFRNVANALSQPGTDLRIFAKPEVHGHRRMAVALAIGTDEADARAKAENVAESLEIDIA >gi|222441572|gb|ABXX02000001.1| GENE 46 47494 - 48246 1104 250 aa, chain + ## HITS:1 COG:BH0626 KEGG:ns NR:ns ## COG: BH0626 COG0152 # Protein_GI_number: 15613189 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Bacillus halodurans # 1 241 1 237 237 249 52.0 5e-66 MEKLEKLYEGKAKQLYATDDPEVLWVEYKNSATAGDGEKKEDFAGKGRLNNLITTLIFDL LKKRGIDSHLVARVGETSQLVKKVTMFPLEIVLRNTAAGHFCSRLGVEEGIELKEPVLEY FLKNDDLHDPFVNDDDLVALGVCTREDLAEIAPLARRINEALIEIFAKIGIKLVDFKIEM GRTSDGTLLLADEITPDSCRLWDQRDGSGKVEHLDKDLFRRDLGDIIPAYEEVESRLAEL AKSEGIEVAE >gi|222441572|gb|ABXX02000001.1| GENE 47 48355 - 52089 4625 1244 aa, chain + ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 2 955 5 966 985 985 53.0 0 MVFRVYVEKKQGFDVEAKQLANELKTILGIASLKNVRLVNRYDVEGISEELFAQATPTVF SEPQVDNVSADLPDFGSDNVIAVEYLPGQFDQRADSASECIQLISQGERPTVRSAKVYAL EGELSDADIAAIKHYVINPVEAREASLDTKTTLKTQVPVPGKVEVIEGFRTMSDADLEQF IADRGLAMDLADLQFCRAHFTEEQRDPTITEIKVIDTYWSDHCRHTTFGTQLDDVQIDDA TVQAAFDKYLEMRHELGRDEKPVCLMDMGTIGAKWLKKNGILKNLDESEEINACTVKVKV DVNGHDEDWLFLFKNETHNHPTEIEPFGGAATCIGGCIRDPLSGRSYVYQAMRVTGAADP TVPVSETLEGKLPQRKLVTTAAAGYSSYGNQIGLATGQVDEIYHPGYVAKRMEVGAVVAA TPADHVRRETPAPGDKVILLGGRTGRDGIGGATGASKAHNVESLELDGAEVQKGNAPVER KLQRLFRRGDACRLIKRCNDFGAGGVSVAVGELADGLYVDLNKVSKKYEGLDGTELAISE SQERMAVDVAAEDVDEFLGYAKEENLEAEVIATVTEEPRMTMVWNGDTIVDLSREFLASN GAPKHQVVHVEAQHGYATPWKTGTLAERMHTMLTDLNVASNKGLSERFDSTIGAGTVLMP FGGRKQLTPNMAMVAKLPVFGETTTASAMAWGFNPYIMEQNQFTGAYLSVVESLSKLVAA GFEHEKAYLSFQEYFEKLRDEPERWGKPMAAVLGALMAQVDLGAGAIGGKDSMSGTFEQL DVPPTLISFAVAVGNMKRATSPEFKGAGHRVIRIAPRYQADGLTPDKDSLLEVFSAVEEF TDFGDALAVSTPGYGATAEAIFKMTVGNQIGVKLADGISVDDLFAPAYGSFIIELADTAK VPAVSNLVEVSEVGETTEAYQFVAAGETLDLAELQDAWEGGIESVFPYRSKGDEKGKTVE TVSFNAPKKTVYTGAGAAKPHVIIPVFPGNNCEYDSAAAFERAGADVSTLIVNNLTPAAV AESTAALVEEIKKSQIIMIPGGFSGGDEPDGSAKFITAFFRAPAVTEAVRDLLNNRDGLM LGICNGFQALIKLGLVPYGDIVPMTAECPTLTFNTIGRHQSRLVRTRVASNLSPWLAKTE VGDMHTIAISHGEGRFVASDDMLAQLKANGQIATQYVDEAGVPGMDLSVNPNGSLLAIEG ITSPDGRVFGKMGHSERYSNGTFKNVPGEKDQPLFAAGVEYFAA >gi|222441572|gb|ABXX02000001.1| GENE 48 52210 - 52437 230 75 aa, chain - ## HITS:1 COG:no KEGG:BDP_0722 NR:ns ## KEGG: BDP_0722 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 75 1 75 75 102 76.0 4e-21 MSLQQTDRYDDIINLPHHRSCTRPHMSMHNRAAQFMPFAALTGYDDIIKQTATHSNEAVE RANTPVNLAEGYLSA >gi|222441572|gb|ABXX02000001.1| GENE 49 52434 - 54068 977 544 aa, chain - ## HITS:1 COG:SA1196 KEGG:ns NR:ns ## COG: SA1196 COG0389 # Protein_GI_number: 15926944 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Staphylococcus aureus N315 # 1 351 7 307 420 173 31.0 1e-42 MAERTYIAIDLKSFYASSECAELGFDPLSTHLVVADQSRTDKTICLAVSPSLKAYGLPGR ARLFEVKAKLKEVNAARRAAAPGGVLRGESYDAKALAANPNLAAGVYIAKPRMSHYLNIS AKIYSIYLRYVSEADIHVYSIDEVFMDVTGYLRAYGKSAHDMAREMIQQILRETGITATA GIGTNMYLAKVAMDVVAKHIPADKDGVRIAQLDEMSYRRLLWAHRPLTDFWRVGRGYAKK LEAQGLMTMGDIARCSIGRADEYYNEGLLYKMFGVNAELLIDHAWGWEPCTIADIKAYKP AGHSMSSGQVLTGAVGFDSARLIVREMADALSLDLVAKGVKAGHMGLMVGYDTASLDPKR LGECGTPELKAMAERAIAEYSGPVTLDRYGRRVPKPATGSIGLDDHTSSTTRICDAVDEL FCRIVDHRLLVRRLNVVASDLQTVEQLAERNAAANYVQPDLFSDMQEVSNGSDSNDCSDN VDNNVRSSYADDMRVVDEISEQHVQQTILDIKRKFGKNAVIKGMDMFADATGQQRNRQIG GHAA >gi|222441572|gb|ABXX02000001.1| GENE 50 54331 - 55845 1750 504 aa, chain + ## HITS:1 COG:SPy0026 KEGG:ns NR:ns ## COG: SPy0026 COG0034 # Protein_GI_number: 15674270 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 472 1 472 484 717 70.0 0 MSAELEDIHEECGIFGVWGHPDAARLTYFGLHALQHRGQEGAGIVSNDNGHLIGHRGTGL LTQVFGDEREIERLKGDKAIGHVRYATAGSGGTDNIQPFIFRFHDGDMALCHNGNLTNCP TLRRQLEDEGAIFHSNSDTEVLMHLLRRSTQRTFMDKLKEALNTVHGGFAYLIMTEDAMI GALDPNGFRPLSLGKMKNGAYVLASETCALDVVGAELVRNIRPGEIVVIDDHGYKIVQYT NQTQLAICSMEFIYFARPDSDIYGVNVHSARKRMGARLAQESPVDADMVIGVPNSSLSAA SGYAEEAGLPNEMGLIKNQYVARTFIQPTQELREQGVRMKLSAVRGVVKGKRVIVIDDSI VRGTTSKRIVQLLKEAGAAEVHMRISSPPLKYPCFYGIDISTTKELIAAKKSVEEIRDFI GADSLAFLSLDGLVESIGLGADAPYGGLCVAYFNGDYPTALDDYESDFLKSLTPEDRVRL PEFALYKSKYEGNEYTTTSPQEEH >gi|222441572|gb|ABXX02000001.1| GENE 51 55864 - 56898 873 344 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 4 339 13 343 356 340 52 5e-92 MPKAYEEAGVSVEAGYEVVKRIKSHVARTNRPGVVGGIGGFGGLFDLASLGYKEPVLISG TDGVGTKLVVAKMANKHNTIGIDCVAMCVNDIAAQGAEPLFFLDYIACGKNDPALLEQVV AGVADGCVQAGSGLIGGETAEMPGMYDEDEYDLAGFAVGVAEKSAIVDGSTIAEGDVLIG LPSTGVHSNGFSLVRKALFEKAGYTVDTVLDELDGEKLGDVLLTPTKIYVKALSPLFKAG VVKGVAHITGGGFIENIPRMIPDGLAAHINLGSWPVLPIFDVLEKAGEIDHMEMFNIFNM GIGMVLAVNAEDADKTMELLKSNGEAGYVLGNIVKKTNSDVELQ >gi|222441572|gb|ABXX02000001.1| GENE 52 56998 - 58260 1713 420 aa, chain + ## HITS:1 COG:SPy0032 KEGG:ns NR:ns ## COG: SPy0032 COG0151 # Protein_GI_number: 15674274 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Streptococcus pyogenes M1 GAS # 1 418 1 419 421 472 56.0 1e-133 MKVLVIGSGAREHAIAHALMRGSSVSEVTVAPGNPGMELDGIRITQISPSNHAALIDFVK NNGYDWVFVGPEVPLIEGIVDDFAQAGIKAFGPSKAAAQIEGSKDFAKQLMERHSIPTAR YQTFSDLERSTTYVREHGAPIVIKADGLAAGKGVTVAMDEETAIAALEDIFVDHRFGNAG AKVVIEDFLEGQEFSLMSFVNGTDFWPMPISQDHKRAYDGDKGPNTGGMGAYSPVPQIGQ DVVDTAIETIVKPTVQAMSDEGTPFTGILYAGLIATADGPKVIEFNARFGDPETEVVLPK LTSDLGAGISALLNGETPEFTWDNDNATLGVVLAADGYPVDVIKGAAIPEIPVDEDSHVY YAGVARSEEGLVANSGRVLLVETSAADIKAAQDKVYAIIDQLDTKGMFYRHDIGAKALNI >gi|222441572|gb|ABXX02000001.1| GENE 53 58416 - 59831 2125 471 aa, chain - ## HITS:1 COG:Cgl1330 KEGG:ns NR:ns ## COG: Cgl1330 COG0477 # Protein_GI_number: 19552580 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 16 467 14 462 483 446 60.0 1e-125 MTETKNSKMLDEGGKSVVALMAALMAAIFAFQLNASMLSPALTTMRVELNTTDAQIGLTQ TVFFTSCAVFSLFLPRLGDLIGRKKVLLGILVLTALGCVVSALAVNVPMLMIGRVIQGVA GPIVPMTLIMLHAKVTEDKKYAKLMAILTSVNGGIGGVDAILGGWLAGTFGFRSVFWVMV GVAVLAIVLVFVYAEESTASETPKMDWAGVVSLAAAFLAAYLAINEIQKLGSANWALVAV EIVIAAVLFVVFWNVEKRQKAPMVTTHYLKQRRTWGLLLTTLLTMTGVFAIMNGIVPALA QDTEVGAGMSASVVSFATLTPYALIGLAFGPVAGVLASKFGYRAVLRTGLIVSVVGVLFG IFVCNVPSIWALVVMSLALGVSYAGTANIMLNGLGIVLSPEDNPGYLPGLNSGAFNLGAG LSYAVLYAAQNAFTASGGATSGYIAAMVGGVILLGLAFCASLLIPKPGEQK >gi|222441572|gb|ABXX02000001.1| GENE 54 59864 - 60805 1143 313 aa, chain - ## HITS:1 COG:Cgl1329 KEGG:ns NR:ns ## COG: Cgl1329 COG1957 # Protein_GI_number: 19552579 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 1 313 1 312 312 427 67.0 1e-119 MSKKIILDCDPGHDDAVAILLAVGNPNIDLLGVTTVGGNQSLDKVTYNARAVLEKAHATD VPVHAGCDRPLVRKQEVAASIHGETGLDGVELPEPSRPLEAGHAVNWIIDTIMSNEPGTI TLVPTGPLTNIAMAARMEPRIVERVKEVVLMGGGYHVGNWSAVAEFNIKVDPEAAHIVFN EAWPITMVGLDLTHQALCTPEVQQRIEGVGTDLAKFVSGLMDFFRKTYQDNQDFIDPPVH DPCTVAYLIDPSVMTTRRCPVDVEIHGDLTLGMTVADLRGPEPSAEECHTQVAVKLDFNK FWDLVTDAIKTIG >gi|222441572|gb|ABXX02000001.1| GENE 55 60921 - 62084 1103 387 aa, chain - ## HITS:1 COG:ECs4466 KEGG:ns NR:ns ## COG: ECs4466 COG1454 # Protein_GI_number: 15833720 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 309 1 308 383 178 34.0 1e-44 MAMEVKLLQPVKVVCTDDLGETLVDIMQTAGYSRPLMVTDSFVGSMPLVVAARTKLEQVG VDVAVFDQVKPDPLCETVESGVEAFEAHKADSIIAIGGGSSMDVARGINIVRVNGGSIIE YTDPAKPIAPCNGMIAVPTTAGTGSEMSNALVVTEGSTGRKLAVLADPAVSEYAVLNADL MLTLPAKMTIACGLDAFCHAAEGYLSRMASPVTDAICEKAMFLLYNYLPRAVANGQDREA RERVMVASTLAGWMLNNAGTIAGHSIAHVLGAKYHIVHGEAVGYALPAVMEFVAPVRAHK VREIGQILGAVYPENAPDEQVAIIASRAFKDFRDRMLGLHPVEDYGISVEELVSNAQAVV DERFAGNTPRDIDLQAAEQLLEGFGSR >gi|222441572|gb|ABXX02000001.1| GENE 56 62088 - 62783 855 231 aa, chain - ## HITS:1 COG:MJ0451 KEGG:ns NR:ns ## COG: MJ0451 COG0135 # Protein_GI_number: 15668627 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Methanococcus jannaschii # 61 218 62 219 226 73 28.0 3e-13 MVVKQIYSLIEYDEAVKTMEAGADNIGLVPMQNGGVPAHRVPIERVHRIFDECKRRGVTS VAIMLTNDPDEMIELAREVRPDILHIAGDGYAADEAFAARLKEAAPNTKLMQAVLVDDES AVDRAKKYAQYCDLILTDSGLAPDTGIGASGLTHDWSIDARIVAECGKPVIMAGGLGPDN VAEAIEQCKPYGVDSLTKTSIKYDGGYMEKDIDKVRQFCINADAAAAKIGQ >gi|222441572|gb|ABXX02000001.1| GENE 57 62837 - 63832 904 331 aa, chain - ## HITS:1 COG:yeiC KEGG:ns NR:ns ## COG: yeiC COG0524 # Protein_GI_number: 16130104 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 14 313 6 302 313 163 32.0 3e-40 MADMTSGNTVPDRYVVVIGGMNMDICGRPTSTVVDRDSNPGVVSMSAGGVGQNIAQNMAH LGMPTYLITVYGDDENGKTLERSCAANNINLDYAAQLEGRRSSTYMFITDDTGDLLVAVN DMEICKEINPAFLESRLDFINGAAICLLDANLEPETMAWIGEHVTAPLFGDTVSTVKAHR FDTILNKMTVLKPNDLEASVLTGIGIADQYSAGAAAKTLLDRGVKNVFISLGANGILCAR HENDEYSFKHVPPYRTEIATANGAGDAGMAAITWSFFDNPDRDLEEVGKIAQAASSIALE CTKAVPDITVERIRKKMSGEIEPLLDEVRTA >gi|222441572|gb|ABXX02000001.1| GENE 58 64026 - 65123 933 365 aa, chain - ## HITS:1 COG:yeiI_2 KEGG:ns NR:ns ## COG: yeiI_2 COG0524 # Protein_GI_number: 16130098 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 56 341 1 286 309 123 29.0 5e-28 MAATDREQQILAWIKQNPLISQNELAELCGITRSGVAAHISNLMKKGYIQGKGYIVTPPS YVAVVGAINIDHYGVAMQDVVGESSNMGRIVSSVGGIGYNIAYNLNRLGVPNYLISVYGD DENGERVKQDAYANGIDITHAKQISHMPTSTFLSVVSAQGRQIVGLDDMQISAEITPEFL AQREQTIVNAEMVAIDSSLPSDAIAWVCEKTSRPIFVRVVSVNKAARITPVLDRIDTMVL NSAEAKFVSGIEVHDEASARDCAEHLLRSGVRNVFLFVDDSDMLYCCEHESFFWSLPGRA EERRYTNGGASAALSALVWARREHKTQRECARYASAAAAMNMSQVQSICADFSEEAVRRK ADLLQ >gi|222441572|gb|ABXX02000001.1| GENE 59 65141 - 67216 2193 691 aa, chain - ## HITS:1 COG:SPy0793 KEGG:ns NR:ns ## COG: SPy0793 COG1368 # Protein_GI_number: 15674836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 103 682 285 813 824 283 33.0 1e-75 MTNESVNTETIEELKISTIDPNAPAKERKEFPGWLYGILFVVFDAIGVAALQIGVSQSAT RVKLSNNMWLTGWGFVTKMFTNLNFVAVLNLILWGVLYVILLMLINRFWIATPIFLAVTF IIAVIEHFKVSIRYEAILPSDLNFLKADAGNLMSFMPAGAQWTILLAVVIFVAFIALFVF LNHRDGRHGKLFRGDDKQSRSLNAIVRLLLIIVPGTFFTLYSMQVSTVGSWAKTFSSAMG DMPSMWDSVYDAQRNGPMVAFTRQLNPKVMVKPDDYSEETMKEVAARYEKEAKKINASRT ENMTDSTVIYVLSESFSDPSRVPGLKINKDSMPNIRSIKENTTSGLMLSSGYGGGTANLE YMGLTGLSMSNFDSSLTSPYQQLVPSEHWTPTINQLWGASKNSIGLHPYESSMYSRATNY KKFGFSHFYTLTGPDVISHQDKIDDSPYVSDEATYESTIEEVKKTDGNQFLQVITMQNHM PYHDWYKNNDFKAESTTDTPLEDDEKESIETYQKGAALTDEATADFLDKLDAIDKPITVV FYGDHLPGIYSSASEDDNNSLALHLTDYFIWSNKASSSQGNEIDNADYSSPNFFVAQAAE HMNAKVSPYLAFLTQMHEKISAMEPPVVNNIQGWDRIPEGQNIYLDADGNPMAESDFDAE TQQLLADYQLIQYDITTGKNYLKDTDFMDLP >gi|222441572|gb|ABXX02000001.1| GENE 60 67493 - 67972 340 159 aa, chain - ## HITS:1 COG:Cgl2228 KEGG:ns NR:ns ## COG: Cgl2228 COG0735 # Protein_GI_number: 19553478 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Corynebacterium glutamicum # 33 156 17 142 144 122 47.0 4e-28 MTACFARQPFPEGRTAREAIKNGHRLTDGRVERNTKQKELIHDALKANDEFISAQDLHRK LEDEGVKVGLATVYRQLNALAEAGEADTVRLEGQQLFRLCGDDGHHHHLVCTNCGKTVEI ESPSETWLRGISEKYGFTIERHTLEVFGLCPDCRNEARR >gi|222441572|gb|ABXX02000001.1| GENE 61 67978 - 69147 1268 389 aa, chain - ## HITS:1 COG:lin1886 KEGG:ns NR:ns ## COG: lin1886 COG0026 # Protein_GI_number: 16800952 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Listeria innocua # 15 385 6 373 374 377 52.0 1e-104 MPSLSEETNGRVERLMPGATIGIIGGGQLGRMMALSARYMGFRIGVLDPTPDCPTAQVAD FQVTAEYDDITAIRELAEKSDVLTYEFENVNADAIDEVRSLSAAPQGTDLLRVTQDRVNE KQFINDHGTPTAPWKAVNSVEELDAALGEIHYPAVLKTRSGGYDGHGQTVLKSDADLEKV RARADRGGGFPPSILEGFVDFAFEASILVAGNGKDYVTFPIVRNEHRNNILHMTIAPAEV SEDVAKEAHELALRLAQGFELAGILAIELFVTKDERVIVNELAPRPHNSGHYTIEACSFD QFDAHIRGIAGWPLEQPELLKPAVMVNVLGQHVAPTRALIAEHPEWNMHDYCKAEVRHDR KMGHITVLTDDTRQTVADLERTGCWDDLK >gi|222441572|gb|ABXX02000001.1| GENE 62 69131 - 69628 681 165 aa, chain - ## HITS:1 COG:BS_purE KEGG:ns NR:ns ## COG: BS_purE COG0041 # Protein_GI_number: 16077710 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Bacillus subtilis # 5 165 2 162 162 211 68.0 4e-55 MADNKPEVAVIMGSASDWETMKHACEMLDQFEVPYMKQVISAHRTPELMGEFAHSARANG LKVIIAGAGGAAHLPGMVAAQTTLPVIGVPVRSHALSGWDSLLSIVQMPGGIPVATTAVG NSGATNAGLLAVSILSTTDERLANALQEYRDSLKEKVAESNAQLV >gi|222441572|gb|ABXX02000001.1| GENE 63 69692 - 70681 1049 329 aa, chain - ## HITS:1 COG:BS_yogA KEGG:ns NR:ns ## COG: BS_yogA COG0604 # Protein_GI_number: 16078904 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Bacillus subtilis # 1 325 1 324 329 193 38.0 5e-49 MKAVYATGTNYDDPLSVLEVGTMPEPETKPFWSTIRVNSASVNHHDVWSLQGVGLSDEQT PMILGTDAAGVLEEDIPVRKGLKAGSEVVLYTFVGTDGAGVMPGERRSILSERYAGTMAE YTQVPSANVFAKPANLNLDEAAALGTSWLTAYSLLFASANVKPGDTVLIQGAGGGVSTAA IQLAHAAGLEVFVTSRSEDKRARVLQLGADAAFETGARLPRKADAVIESVGAATWSHSVK SVRPGGTIAICGATTGDQPGAELTRIFFQDIRVQGNTMGSREDFARLLKFVEHADLHPVI DSAYAIDDAHLAFSKIVNGDVFGKIVLHI >gi|222441572|gb|ABXX02000001.1| GENE 64 70853 - 72769 1911 638 aa, chain + ## HITS:1 COG:CAP0106 KEGG:ns NR:ns ## COG: CAP0106 COG1154 # Protein_GI_number: 15004809 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 6 636 3 585 586 508 43.0 1e-143 MTAGILSSIHTPADVHALSAQQLRDLCLEIRATLLDYGKKHGGHIGSNLGVVELTVALHR VFDSPRDRFIFDVSHQSYVHKMLTGRAEAYLDQSRFDEVTGFTNPLESEHDSFVLGHTGT SISLACGLAKTRDMQRGAAGESTIGNVIAIIGDGSLSSAIAFEGLNNAAEQGGNLIIIVN DNEMSIAEDFGGMYGQLAKLRTSNGMAELNLFKAFGLDYRYVEQGNDVDALVEVLNEVKD IDHPIVVHIHTTKGLGFNDETEADNGSDGCNQTNPQPHAGQCEANHWQDPEASLGKPLDA RKYYGEMAMASLERRFDNEPGLVVISPATPGSNGITRDFRERAGAHYVDTGITEEHAAAF AAGIARAGGRPVLATSATFFQRTFDQLQQELALNHVPATLLIFGAGISGADNTHSGTFDM TMFANVPDVTCLAPASGEQMLDMLAWATGPSGHGVVAIRMPGEQILALERAADMAFDPLQ RAEEHDPAVNIAGACPFARYQIVQPGRDVAILGLGNTMPLAAEITSALAENDEEHAAITA TLVDALQYSTMDAELLAMLADGHRLVVTLEDGQLEGGWGEKVTAFYANSSNTKASHVRVL NFGAAKEFTDRVPLGELNERYGLTSETIVSRIRGILSE >gi|222441572|gb|ABXX02000001.1| GENE 65 72858 - 74330 1149 490 aa, chain - ## HITS:1 COG:BS_ytrF KEGG:ns NR:ns ## COG: BS_ytrF COG0577 # Protein_GI_number: 16080093 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 1 489 1 435 436 123 25.0 9e-28 MRFSDIARSCTQNLLRRKSRTILTVLGVIVGCCSIVLMISIGQGINEQNEQMLKNMGNLN DITVYADGGGSHSTATSSSVSGADGEQAKLDDDAVQNFRSIAGVAGVLPQKTMSYSVDAA QGAGSRYVSQYVNVVGVDATQLEESGYKLASGRLPMRAGEVLAGKSFVYSFYDKYASDPS NHRIEAGGYYCDEHGCAQSEGEDPFFDMLNSKITLITGANYQSPDDYHKVGGGSVAPSDS GSGESPTITMPYTVVGVIDSSANNYDAFTSGIVMSIDDMKTLNAKISGDTKANTSSKVVY DQVLVHTQDIKDVADVEVQIKGAGYQTSSFEQTRKEIEKQSRGIQLALGGIGAVSFFVAA IGIANTMIMSVSERTREIGIMKALGCYVRDIRMMFLCEAGAIGLVGGVIACLISAIGSIG INMASLGGFSIENIGKAIMGGDDVTRISVIPWWLFVVAMLFSIAVGVVAGFGPANKAVKI PALDAIKNDQ >gi|222441572|gb|ABXX02000001.1| GENE 66 74333 - 75454 1421 373 aa, chain - ## HITS:1 COG:no KEGG:BDP_0710 NR:ns ## KEGG: BDP_0710 # Name: not_defined # Def: S-layer domain protein # Organism: B.dentium # Pathway: not_defined # 1 365 1 392 407 416 63.0 1e-115 MSNSNHSAKFINMLIALMASIAIALTCIVPTALAEDGDGTDDNNGGSTVQPAGPVPNIII TNFTYGDGSVAVGTNFDLGFTFQNMGKVAVGNMVVTVDGGENFAISGGTNTFYYDSLWAG YSLTQTVPMQVLSSAKNGAQGIDINFKYEYVDGGTRNSNTSDIKISVPVSQPDRFELGDP VLPDAINAGEESTISMEYVNKGKGDVSNVEASIEGDGITATQATQYIGNVASGASGSIGF AFTADAAGEYDAKLKVTYEDADGQQQTKESPVKITVSEAPAPADPGMDVDPQENQGIPTW VWIVVAVAVVAVIAIVVVVVVRRRKKAKKAAEDDDWDWDPSDSHAGADDGAANTAGAIDA PTQVIDSVPSAKE >gi|222441572|gb|ABXX02000001.1| GENE 67 75479 - 76186 219 235 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 230 1 222 309 89 27 3e-16 MAGTRRPIIEVKNLRKEYPVLDETVVALERINLTIPQGQICCIYGESGSGKSTLLNQLAG MEKPTKGGVRIGGVPISRLNERQLAEFRQKHLGFVFQSYNLLPNLTAVENVAMPLMFQGM PKNKREAIAKKMLKRVGLGKRMNHYPTQMSGGQQQRVGIARAFAARPQVVFADEPTGNLD SKTKTDVMNMICAFARDLDQTIVLVTHDDNMAQYADRIVTLLDGRIIDDRLMNNA >gi|222441572|gb|ABXX02000001.1| GENE 68 76511 - 76948 567 145 aa, chain + ## HITS:1 COG:no KEGG:BAD_0509 NR:ns ## KEGG: BAD_0509 # Name: not_defined # Def: transposase # Organism: B.adolescentis # Pathway: not_defined # 1 145 12 154 154 214 75.0 1e-54 MRRRFTQTEVYYLNTLPAVERASMDRITYSKEFQVRCMAQYLRGNGPTSIFASAGLDPKI MGGKRIERAIARWKADPKIMLEAQTLANKSDSGQRDLLVITQAMTIKWLEKKVMDLQKQL HLLESHAMNCSLPNSNSKEGLVSMA >gi|222441572|gb|ABXX02000001.1| GENE 69 77236 - 77463 82 75 aa, chain + ## HITS:1 COG:no KEGG:Odosp_1516 NR:ns ## KEGG: Odosp_1516 # Name: not_defined # Def: hypothetical protein # Organism: O.splanchnicus # Pathway: not_defined # 1 53 6 58 448 73 56.0 2e-12 MLFRRKTYQTLMAWKSQSNGKRAMLIEGARRVGKSTLAQEFAQHEYEGHLVIDAEHRHGY FATISQLRPRTSWPG >gi|222441572|gb|ABXX02000001.1| GENE 70 77423 - 78322 1178 299 aa, chain - ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 2 293 4 295 296 235 44.0 1e-61 MPFLITLLVIALIVAFLFLSTLFIVPQQQAYIIERFGKFNKVQFAGIHIRIPFVDRIAMK TNMRVNQLNVQLETKTLDNVFVTVVASTQFRVDPSNVATAYYELRDPAGQLRSYMEDALR SAIPALSLDDAFSRKDDVAFDVQKTVGNEMSRFGFTVVKTLITAIDPSPQVKNAMDSINA AQREKEATRQRAEAQRIQIETQAAAEAEKTRLQGEGQANYRREIANGIVDQIKSLQAVGM NVNDVNNVVLFNQYLDTMRNLASSQNAKTVVLPASTPGGFNEMRDQITQAMMSADEAAK >gi|222441572|gb|ABXX02000001.1| GENE 71 78578 - 78835 269 85 aa, chain - ## HITS:1 COG:MT3292 KEGG:ns NR:ns ## COG: MT3292 COG0695 # Protein_GI_number: 15842784 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Mycobacterium tuberculosis CDC1551 # 5 78 4 78 84 65 44.0 2e-11 MIDNAAIDFYGADWCGDCHRAKAALDRFGVAYSLHDIEHEDGAAEKAIAISGQQHIPVIR FADGSWLVEPSATQLQAKCKELGLI >gi|222441572|gb|ABXX02000001.1| GENE 72 78975 - 79421 383 148 aa, chain - ## HITS:1 COG:CAC0391 KEGG:ns NR:ns ## COG: CAC0391 COG0626 # Protein_GI_number: 15893682 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Clostridium acetobutylicum # 1 135 147 281 377 144 47.0 4e-35 MLQVNNVTKIAEIAHRYGAISIVDNTFVTPYLQLPLDQGADIVIHSATKYLAGHSEVNAG LVVVKDDGLGKRVYFAQNRLGGVLAPNECDSVRRGIQTLALRMDRQQENARAISSYLLLH PLVKSVHYPGLSGHEYEIWTLFRKLRMR >gi|222441572|gb|ABXX02000001.1| GENE 73 79377 - 79580 65 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212716849|ref|ZP_03324977.1| ## NR: gi|212716849|ref|ZP_03324977.1| hypothetical protein BIFCAT_01792 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_01792 [Bifidobacterium catenulatum DSM 16992] # 1 64 27 90 90 114 95.0 3e-24 MSDFSNLRHIVDLQQRIGKNFEIHGLRRTTMRGSLGGVPGNSGIKRFVVGGFTAPVLLSL TGSPWTN >gi|222441572|gb|ABXX02000001.1| GENE 74 79849 - 80055 141 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIGGWDVHNRSKDDRKQSEENRKSDCASTQSLIHAKRLRRKNYASTAVTRRTASRNWSS DLSRLNRT >gi|222441572|gb|ABXX02000001.1| GENE 75 79977 - 81155 1347 392 aa, chain - ## HITS:1 COG:BS_ykrV KEGG:ns NR:ns ## COG: BS_ykrV COG0436 # Protein_GI_number: 16078422 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Bacillus subtilis # 13 387 8 383 398 280 40.0 3e-75 MTSYVSPVAFTTVAQSIPPNVFADMDRKVAAAVADGADVIDLAKGNPDAFPADFIREVAK KAVDDPANARYSPFDGKPSFLQAAEQWYRNTYGVEVDWKTQLFAVEGAVDGLAALFAVLV SPGDAVAYADPYYPSYHCMTVMSRAEEVLLPSLPERGFLPDLDAVPAQVWNRVKVLVLNY PNNPTGAQAPRGFLQRAIDLAHEYHFAIVQDFAYAGLGVDAQQISILSLPGAFDIAVEVC SLSKMYAMAGWRAGFIAGNDDIVSHVKQYHYQMGSMVTSSIQDAGTVALLSDQSCVAELA ERYASRREIVAGGLREAGLDVFDSDGGIYAWVHAPEDQTGEQFADTLLERAAVAALPGTC FGKVGKDYVRFSLLKSEDQLREAVRRVTAVLA >gi|222441572|gb|ABXX02000001.1| GENE 76 81218 - 81877 846 219 aa, chain - ## HITS:1 COG:RSc0921 KEGG:ns NR:ns ## COG: RSc0921 COG2011 # Protein_GI_number: 17545640 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Ralstonia solanacearum # 8 219 5 216 217 147 46.0 1e-35 MEETLEILQDNLGQALIDTAYMVVVSAIIGVVLGTLVALLLYLTENRLFTPNHALNVIVG FIVNAIRSLPFLILMVVLIPVAQLILGDPYTPTGGAISLSIAAVPFFARIAESAFSEVDP GLLEAAISTGATTRQIIVDAVFPQALPSFIRGVVLTIISLIGYSAMVGTIGAGGIGDMAI QYGYNRYETGVLVVIVIILIVIVQIIQWIGDWFARKVTH >gi|222441572|gb|ABXX02000001.1| GENE 77 81883 - 82944 1338 353 aa, chain - ## HITS:1 COG:lin0312 KEGG:ns NR:ns ## COG: lin0312 COG1135 # Protein_GI_number: 16799389 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Listeria innocua # 3 327 1 326 338 310 52.0 3e-84 MSVIELNDVSVTFHEGGRTVEAVKHVNISVEKGEIFGIVGFSGAGKSTLVRTINLLERPT GGHVVIDGSDITALKGGQLRDLRKKIGFIFQGFNLITNVTVGKNIEFALKAGGYPKAQWS ARIRELLALVGLENKIDSYPSSLSGGQKQRVSIARALANKPEILLCDEATSALDLETTEG ILALLQRINRELGITIVFITHQLDVAKQIFDRVAVMENGVVVEQGNTFDVFSTPKHPTTK ALVECYLGIAVPPQLVPSLPAGTIVELRYKGDAALEPLISRVAQDYGVSIDVLHANVEYF GSQAIGILIVLVSGAGEPLVQALNTLRTHVFSYRELDRGQLVVAAEAADNQEA >gi|222441572|gb|ABXX02000001.1| GENE 78 83100 - 83978 1335 292 aa, chain - ## HITS:1 COG:STM0510 KEGG:ns NR:ns ## COG: STM0510 COG1464 # Protein_GI_number: 16763890 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Salmonella typhimurium LT2 # 53 289 31 269 276 202 47.0 4e-52 MTIAIFKKPNGIKRIVAAVLAAATLISVAACGSGNGASASKESLNTTKGKTTTITVGVCA GPYGDMVDKVIAPLLKDDGFKLKTKLFNDYVQPNQALASGSIQANLFQHGNYLKKFTADN NLDLTALGQTPTLGLGIYSNKYKSIDDIEDGATVAIANDGSNLARSLGVLQQQGLVTLKG EVDATKATVNDIASNPKNLKIKTIDAAQLARSLDTVDVALVPGNYSWAADLKPADALAME KQDDGVIEVFVVRTQDVDSDFGKAVKKLLVSQKFKDAIAKSEFKDFGKPTTW >gi|222441572|gb|ABXX02000001.1| GENE 79 84018 - 85040 1456 340 aa, chain - ## HITS:1 COG:STM2573 KEGG:ns NR:ns ## COG: STM2573 COG1893 # Protein_GI_number: 16765893 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Salmonella typhimurium LT2 # 1 314 1 303 305 149 32.0 5e-36 MKYAVIGAGGMGIQYGVLLQEFAHKDVDFVDTWKPNVEKIREQGGAYVSQDGEDRHLVPI NVYYPEEYAGQPDVWIVFLKQMQLDGVLKRCAHLFNEKQIVFSAMNGYGHFEKLNEYFST DRIYGGTALIGAYVYGPGDFNFTGGVHAKAMNLCAYADDVTDEVRKHEQALYEDFVTATL NPTIVDNFIGMCMAKIVFNSVLNTLCTMYQIRFGEFHAHPDARWLTEQLVDEAYSAAEAA GYQLLGTRETEVETILHTAGVAHPLHYPSMYQDLTKGRPTEVDYINGYIAKVGREHGYEC KLHEFLTREVHLAEQAFAIHNPDIVAQAKADVEASKPVTE >gi|222441572|gb|ABXX02000001.1| GENE 80 85295 - 86203 1388 302 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 11 301 2 279 279 261 49.0 8e-70 MTASIINKTFKSIVAASAALIMAASVAACGPSAATPSDEGSTGSDSSSSSSATARTLDEI KKSGKLKVAVFSDKAPFGYVDKDGNYAGYDVYFAERLGKDLGVDVEYTSVDAAARVDVLT SNKVDITLANFTVTDERKEKVDFAKPYMKVALGVVSPENAEITDVDQLKGKTLIVTKGTT AETFFEKNYPDIKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITELG DKDTIAAAVQKGNKELLDWINDEIDKLGDENFFHKDYEETLKPVYGDEVDPDEIVVEKGV VD >gi|222441572|gb|ABXX02000001.1| GENE 81 86273 - 87121 464 282 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 32 263 16 240 245 183 44 1e-44 MTDAAGKQTQAGQASLGIAHLVKQYANADRPVLNDISFDVPHGKVFVIVGPSGSGKSTLL RTIAGLEPIQGGTISLNGEVIETGKPGTESAGRSKRSSELRTRVGMVFQSYDLFPNKTVL GNITLAPTLVQKRDKGEVEQEAIRLLERVGLADRKDSWPHELSGGQRQRVAICRALILHP EVLLFDEVTAALDPEMVREVLDVMLELADSGQTMLIVTHEMQFARAIADQVILLEDGGIV ERSDDAERFFTNPTTERAKQFLHTFEFDRHRKSAEQSERSEQ >gi|222441572|gb|ABXX02000001.1| GENE 82 87114 - 87788 741 224 aa, chain - ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 2 221 4 223 225 228 54.0 7e-60 MSGAEILLEPGVFPRLLQGLWVTVWIAGVSVGLSVPVGLVVGWLMTMKNPVIRVLTRIYL DFIRIMPQLALLFIAFYGFARAWNWNLDATGACVFVFVLWGGAELGDLVRGALESIPKAQ YESAYVLGLSGWQTFVTVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQI IDANRFQYPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWSHD >gi|222441572|gb|ABXX02000001.1| GENE 83 87775 - 88431 893 218 aa, chain - ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 22 215 1 194 206 196 58.0 4e-50 MFDWTFVTHYAPFFVSGAEMTLFISVFGIVLSIVVGLICASIEIARIPVLKQIVRVYIEL SRNTPLLVQLYFLYFGLPKLGVVWSAEQCAIVGLGFLGGSYMAEAMRGGLETIPTVQRES AYVLGLSQWQTLSRVVIPQAISTSIPGIVANVIFLIKESSVVSAIALADVMYMAKDLIGM YYNTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR >gi|222441572|gb|ABXX02000001.1| GENE 84 88465 - 88665 129 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLYGSLGTFSGFSRLSPWMRPIVPRNNRGTGHVVIGFSYKRLSASDNTSGDPFTVLHAGV STVRPY >gi|222441572|gb|ABXX02000001.1| GENE 85 88705 - 89313 680 202 aa, chain + ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 3 172 5 160 162 148 41.0 5e-36 MLIRHATMEDLDAIEAVEAACFPPAEAATNESLTARVATYPEHFWLLINTDADDDACFPA SVEDGTLVGFVNGMTTNEKDLADVMYEDVSMHDEQGDWQMIFGVDVAPVYQHRGCASYLL RRVILDSTIAGRKGIVLTCKERLVGFYARLGFVDEGMSASTHGNVAWHQMRLPLTQSPSE ESFVKSDPDAKTMEIPMVSIAN >gi|222441572|gb|ABXX02000001.1| GENE 86 89825 - 91813 2109 662 aa, chain - ## HITS:1 COG:CAC0854 KEGG:ns NR:ns ## COG: CAC0854 COG0480 # Protein_GI_number: 15894141 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 1 652 1 640 644 520 41.0 1e-147 MKRIVAGILAHVDAGKTTLSEALLYATGQVRKLGRVDHGDAFLDTDAMERQRGITIFTEP AVIATPDLTITLLDTPGHVDFSAETERTLAVLDYAILVISGADGIQGHTETLWRLLNRYQ VPTFVFVNKMDSPGADKTQLLAQLKKRFSDGCVDFTEPIDGERMEEIAMQNETAMDAYLD TETVPDETIRAMIARRELFPCYFGSALKMDGIEQFVAGFERFAQEPQYNGEFGARIYKVS HDAQGNRLTWLKVTGGELKAKMMLSGTAHAGDADVVAEDGQWHEKADQVRVYSGAKSTTV DTVPAGTICAVTGLTQTFPGEGLGMERDAGSPVLQPVLTYTLEPGECDIHKCLVALRELE DEDPLLHVVWQSRLEEVHLQLMGAVQLEIIQQIMHDRFGLDVTFGPGSILYKETIAAPVE GIGHFEPLRHYAETHVLLEPLPQGSGMAYATVCSEDVLDRNWQRLIMQHFQEREHLGVLT GSPITDMRITLLTGRAHLKHTEGGDFRQATYRAIRQGLMEAKKKGDCRLLEPWYGFRLEV PQDMVGHAMADIQRMSGTFDTPTGDGEYMVLNGTAPVSEMRDYAMDVNAYTHGRGHLSCV FAGYQPCHNADEVIENMAYDPESDLENTPDSVFCAHGAGYPVKWYKVPEFMHLDYAWHGE EA >gi|222441572|gb|ABXX02000001.1| GENE 87 92030 - 93019 1211 329 aa, chain - ## HITS:1 COG:Cgl1047 KEGG:ns NR:ns ## COG: Cgl1047 COG3238 # Protein_GI_number: 19552297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 326 1 304 307 196 39.0 4e-50 MLQGLLGIFSGLITPVQTAVNTRLGRSIGSPLRASLVSFSVGLIAMLTLTLLLGPYPLIP ATAANGPWWMWFAGVFGVTFLTGNVLLLPKLGSLKTVIMPVTGQIVMGLLIDAFGWFGTT AQPISPLRIAGAAITLVGFLLAVAGPNLRLRPAIDRPAGGSENSGDSEKSETDGKAVHVP GSATVLWSCAGIAFGMCSAVQTALLGKLGVALGSPVKASLASFVVGLISLAIVVAFVDRT YSLGDALKKGNPWWMWVGGLLGAMLVMCNAYLSAHIGTGMTVMLVLLGQVGGGLLVDRFG LLGVPRKPVAGIQYVGVLVAIVGIVLKAM >gi|222441572|gb|ABXX02000001.1| GENE 88 93208 - 94401 1382 397 aa, chain - ## HITS:1 COG:RSp0802 KEGG:ns NR:ns ## COG: RSp0802 COG0471 # Protein_GI_number: 17549023 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Ralstonia solanacearum # 34 361 72 373 408 107 26.0 4e-23 MRRLVVKILKNETILVVASILALISCFIVPPDKEYAGYIHASTISQLICLMLVVCGFQRI GVFRIIGSRLLHHVSTARGLVITLISLTYFSGMLITNDVALVTFIPFAIAVLTMAHMEEH AVLVGTLMTVGANVGSMLTPIGNAHNLYLKALTGMPSAEMIGIMAPYSVAAAVLLVVIVC VVFGKKPVSEFSSIDGSGIEQNVLAPNSDQPQPDEIRVTGYGAGYGGWRTIVYCALFIVC LLAVSDFIPLWAMCVIVVVAFLFCDRRVFRNIDWGLPLTFCMFFIFIGNMKRVPEFYELA ASLVGAHPLEVSVVSSQFISNVPTTLLLSGFCDQWRALIIGTNLGGMGTLIASMASLIGY KNVTRAYPDKKGCYLAVYTAVNVLFVIVLVGLSWIIE >gi|222441572|gb|ABXX02000001.1| GENE 89 94762 - 96846 2175 694 aa, chain - ## HITS:1 COG:MT2408 KEGG:ns NR:ns ## COG: MT2408 COG0358 # Protein_GI_number: 15841850 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Mycobacterium tuberculosis CDC1551 # 1 693 1 637 639 415 37.0 1e-115 MPGMILKEDIEKVRATADLYDIVSATVTLKPSGTGTYVGLCPFHDEKTPSFSVRPALGVW HCFGCGLGGDVFGYVEHQENVDFRDAVELLADRYHIELRYDQSNAKKEHTGSKRARLLEA NEAAQEFFVSQLMTKDALAARKLLDGRNFSQADCQRFGCGYAPQGWDNLVRYLAGKGFTQ QEMLDAGLARQGQHGVYDYFRGRVTWPIRDSTGRTLGFGARKLYEDDSISAKYINTPDTQ LYRKNQVLYGIDMAKSAIVKKRQAVIVEGYTDVMAMHLAGIDTAIATCGTAFGAEHAKIV RRLIADDSLGAVQLVGPLKVEGQALSSRIVFTFDGDAAGQKAAIHAFGLDSAFSTQAFVA VADDNLDPCDLRIKRGNEAVRALIDHAEPLYDFVIKTAIGRFDTTYTTGQMGAVKAVAPL IAQIRDRSLLDLYSRKAVRQIGVDLDIMQREVRDARRKLQVRDEDAYAPKRRFAGNAGAA VEPRMEQGTNPYANPSARKALEHRDAAEQSYYRIDDAVFICEQQFMATLIQVPLAVDPTL FASLTLSSFMTPVFRTLFQAVAAAGGLPSADTPQGLWMHNLTKAGGPMLESVINELAVMP LPLPPSDTDAERASQQSQEGNVQLRKPTDDERRYASELIIRLLDTGIMRKIGADQRRMAQ LPDGAEKIELLGQITKLETLRKDLQTRVFGNNVA >gi|222441572|gb|ABXX02000001.1| GENE 90 96952 - 98535 1695 527 aa, chain - ## HITS:1 COG:MT3532 KEGG:ns NR:ns ## COG: MT3532 COG0787 # Protein_GI_number: 15843019 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 104 511 36 407 408 249 40.0 9e-66 MVLYGLDRTDFRDSGTPQTPEIKEGLNASYTGGVRALCKESVKTWRGQNRENPVNRLTMC ARLSEAVTWERNNRAMTFNAAREWQFSSEQGKANYEAAQKQYPAQAIVDMAALRNNMRHL VSVVGGPNSGTAVMGVVKADAYGHGLIPAALAALAGGATWLGTAQSHEALLLRKAGIGPD RCHILTWVYNGMAVPFDELIDNDIDISVGSLPGIDGVAAAARRLGKTARVHVKVDSGFGR NGFTPATFDAALAKLVPLAKEGVLHIVGQWSHLAVADAPDVPEFVASTDRQIENFKDFTR RMEQAGIAPEIRHLANTAATLSRSEIHFELTRPGIGLYGYEADPAMGTPGTYGLTPAMTL QAQLGTVKDVEAGHGISYGRTYLTPSDTSTAIVPVGYADGIHRSASGFDMEGAKHVVKPG GPVRVMTTEGPRLYRVSGRVCMDQFMLDLHGSAEKLGVHEGDTVQLFGPGRGEDYAEPTA DDWGRAAGTISYEIFTCLCNRIPRLYEHASDVLSVEDLAKLDPATLL >gi|222441572|gb|ABXX02000001.1| GENE 91 98554 - 99981 2014 475 aa, chain + ## HITS:1 COG:RSc1588 KEGG:ns NR:ns ## COG: RSc1588 COG0531 # Protein_GI_number: 17546307 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Ralstonia solanacearum # 1 472 1 464 476 467 53.0 1e-131 MDLFRKKSVDQLVSESTPLKRTLKTFDLTMLGIGAIIGTGIFVLTGKGALTAGPALCVSF LLAAVCCGFAGLCYAEFAAMAPVSGSAYSYAYLAFGELIAFVIGWDLILEYALQAATVSA GWSGYFNKLLEGFGLHLPVELTAAYGTTPGVTTYFNLPGFVIVLIITWVLSIGINQTKKT NDIMVMIKLAIIVLFIVCTVWYINPANWKPFSPYGIYTFQPGSTQPYGIVPAASIVFFSF IGFDAVSSSAEETINPNKTLPRGILISLAVSTVLYIVMTLIMTGVVPYKEFANFIDAPVA GVILETGLNWLAFVVNLGALIGMTTVMLVQLYGQSRICYAMSRDGLFPKFFGEVHPKYRT PFKGTWFFGILTAIAGGFININVLFELVNIGTLSAFIIVSAGILWMRKTQPDAHRGFRAP GVPFTPICAIIFCFILICGLNWETWVRFAIWFALGLIVYFVYSRKHSALNEPGLF >gi|222441572|gb|ABXX02000001.1| GENE 92 100178 - 100714 642 178 aa, chain - ## HITS:1 COG:L36177 KEGG:ns NR:ns ## COG: L36177 COG0454 # Protein_GI_number: 15674159 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 14 174 5 164 169 89 36.0 4e-18 MGEESVITSERRFRRATMADWPTMQKIYEHARKLMASNGNPTQWGDKFPREEVVRDDIES QRTVLLVDTVDGEERVLAQFALCPGVDPTYVNIDGAWLDDDPYVTIHRIASSGLAKGAAK DCINWCIEHYGNVRADTHPNNKAMQHVLESNGFARCGLIQLLDRPFDTTRIAYQRHEW >gi|222441572|gb|ABXX02000001.1| GENE 93 100823 - 101308 616 161 aa, chain - ## HITS:1 COG:SP0340 KEGG:ns NR:ns ## COG: SP0340 COG1854 # Protein_GI_number: 15900270 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Streptococcus pneumoniae TIGR4 # 7 161 6 160 160 238 67.0 3e-63 MAEDKPVVESFQLDHTKVKAPYVRYIDTQTGPNGDVISNYDLRLVQPNENAIPTGGLHTI EHTIAVLLRERIDGYIDCSPFGCRTGFHLLTWGEHSTEEVARALKEALEFIAYEATWDDV PATTIESCGNYRDHSLFTAKEWCKDILAKGISSDAFERRLV >gi|222441572|gb|ABXX02000001.1| GENE 94 101475 - 103400 1344 641 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 11 640 9 589 714 506 41.0 1e-143 MTEFTSARDALRTYFGYDAFRPGQEGIVNAIIQGRDALGVMPTGAGKSICYQIPATLLPG MTVVISPLISLMRDQVDALNDVGIPAAFINTTQSPDEQDLVFVQALSGRIRLLYVAPERL ETERFRTFASRVPISLVAVDEAHCVSQWGQDFRSSYLGIGDFLKALPTRPTVAAFTATAT ERVRRDIIGILGLRDPSVTVTGFDRANLYFDVIRMERKHKASWVASYIADHPDESGIVYC ATRKEVESLAESLNIAVRELRAAKGEDATRIGTVAVAYHGGMSAETRDRAQRDFVTDRVP VVVATNAFGMGIDKSNVRYVIHHNMPESIEAYYQEAGRAGRDGEPSRCTLLWNESDIATR RRLLDSDYENERLTAEEQEVVRASKRRLLNAMIGYCRTTDCLHEYMTRYFGEAGGAAVRD DGACVGGCANCGNTFETVDVTDIARAISRCVHDVNQKVGSGKIVKVLRGSKAQDLNYLHP VDLPTYGMLSATSEVQIRDVLSQMATDGFLSISEGSMPIVRFGERAAETVAPNFHYEIKK IERKHATKRAESPSVGSQAMGSYVPGDGDEELFAKLRALRLDIARELGKPPYIVFSDKTL RDMVRVRPVTGEQFSQVNGVGALKLEAYGERFMEVIRDFVA >gi|222441572|gb|ABXX02000001.1| GENE 95 103427 - 106222 3265 931 aa, chain - ## HITS:1 COG:L119891_1 KEGG:ns NR:ns ## COG: L119891_1 COG1136 # Protein_GI_number: 15672696 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Lactococcus lactis # 1 293 3 290 290 223 40.0 1e-57 MLQIQGISKQYKTGDFVQRALDNVSLNLRDSEFVAILGPSGSGKTTLLNIIGGLDHYDSG DLVINGISTKQYKSRDWDSYRNHTIGFVFQSYNLIPHQTILSNVELALTISGVSHSERRE RARKALEQVGLGEHVNKKPNQLSGGQMQRVAIARALVNDPDIVLADEPTGALDSDTSVQI MDLLKEVAKDRLVVMVTHNPELAYQYATRIVELKDGVIRSDSDPFEPAQNETATAPVHKT MGRASMSFGTSLALSFNNLRTKKGRTFLTAFAGSIGIIGIALIMSVSAGVNTYIDNIQRE TMTAYPISIDEQTFDLTSMMTSGQQSADNQGKKHKSDAIYPDDAAIKGTASMTSSITENN LSAFKKYLDNKDSDINRYIGSAGIQYSYDTRFSVFSHDPDGTLVNADGVTVGKTGTKSMA DQMADGSLMSADSSTFTSTRVSMLTGKTDQNAAPSSFHEIMPSADGKKNVGKVISDNYEV VEGSWPKNKNEVVLVLDENNSLSLTAVYELGLKSASEYHDMMNQLNSGDDVKTDTKKIDY SDVIDRTLKLLPACDQYVKGDNGHWTYVGDDVDQINALIDSDKAIDLKIVGVVKPVEDAD ATPLSSGVGYTRALTNELIDRAESSEIVTEQQSDKDHNVLNGMTFSPSDDATKAQDARDY VASLGVSSKAQMAQNMMAAADASGGDSQQAAAMAQMGEQQLADQFDAYIATADEATLVAI YNQYVSTGSYNDNLADFGVVSRDAPSSINIYVDSFEDKNSINDAIDEYNKTAKEKDKITY TDYVGLMMNSVTTIINVITYVLIAFVAVSLVVSSIMIGIITYISVLERTKEIGILRAMGA SKRNVSNVFNAETGIIGLLAGLIGVGATVLLNFPINIVLHHFMGTTEVSAVLPVGNAIAL VILSVVLTLIGGLIPSRGASKQDPATALRTE >gi|222441572|gb|ABXX02000001.1| GENE 96 106441 - 107622 1545 393 aa, chain - ## HITS:1 COG:MT1110 KEGG:ns NR:ns ## COG: MT1110 COG0626 # Protein_GI_number: 15840515 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Mycobacterium tuberculosis CDC1551 # 16 390 15 387 388 442 61.0 1e-124 MTISTNTEALNATALATRAIHAGQEPDPTTGAVVTPIYMTSTFKQDGVGGLRNGYDYSRS INPTRNSFDEQLAAVEGANYALSFASGLAAIDVLLRATLKPGDNILLGNDVYGGTYRLLS KVFVPWGVGLDVVDITDTAAVSAALSQKQYQYIWVETPSNPLLNITDIAATSAVAHAHDT KVVVDNTFASPVLQHPLTDGADVVVYSTTKYIGGHSDVVGGAVVLNDKEIRDEVAFLQNA AGAVPSPFDSWLDIRGLKTLDLRVKQHSRNAMKVAQWLETRPEVERVWYPGLESHPGHEI AARQMHGGFGGMISVQIAAGFEAAKKFAGATEVFTLAESLGGVESLIEHPGAMTHASVAG TTLEVPANLVRLSVGLEDADDLIADLEQAFRRV >gi|222441572|gb|ABXX02000001.1| GENE 97 107701 - 108711 549 336 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 305 1 299 308 216 39 2e-54 MTIHNSLSELIGNTPLVKLNHVTDGIKATIAVKVEYFNPGGSSKDRIAERIIDAAERSGE LKPGGVIVEPTSGNTGVGLALVAQQRGYRTIFTLPDKVSEAKRAVLRAYGAEVVVTPTDA GPDDPRSYYQVAERLAKAIPGGYRPNQYDNPNGPESHYHTTGPEIWEASDHQVTHFVAGI GTGGTISGTGRYLKEASDGAVQVIGADPEGSIYSNPNDVHQYSIEGVGEDFYPKAFDREL PDEIVQVNDAEAFEMTRRLAAEEGLLVGGSSGMAVTAALKYAREHDLDEDQLVVVLLPDS GRSYMEKIFNDDWMRANGFADVVERTSKPSLAERYL >gi|222441572|gb|ABXX02000001.1| GENE 98 109151 - 109930 273 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 259 1 244 245 109 29 2e-22 MTGENEKTTMLQGRGINKYYGAKQQRRQVLHDVDIDVRSGECLAVIGGSGSGKTTLTRVL LGLEHAETGEITYFGKPVQGEVAGELRRSCGLVFQSPFGSLDPRWRVGRSVAEPLRLHHP DWSQERIAERVSEAFRMVSLDPAAYENRFPVDLSGGQAQRVAIARAIADHPKVLLADEPM SAVDVAARTQILASFAAIRSGEPDMALIMVSHDLGVVQHIADRIMVLHDGCVEECGLTET VLHHPTSDYTKRLLDAASL >gi|222441572|gb|ABXX02000001.1| GENE 99 109942 - 110727 362 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 237 38 253 329 144 36 9e-33 MSVSIRNLNIVIDGMPIVHDVDMDIADGERVGLIGSSGSGKSMIAKSIMGLLPLSAQVSG SIDMGGTEIVGASDQAIADLRGRYVGMVFQNPSAALNPVMTVAQQVALPLRLHYDLTRDE RLDRVKAMFAKVRLPEDVLNKYPHELSGGQQQRVGIAAALVTSPRLIIADEPTTALDSIT QRQIVDLLASLVDDSGASMLFITHDFAVLNHATTRCYVLADGRVAESGQTADILQSPHTK VASQLATSARALSLRIDAETK >gi|222441572|gb|ABXX02000001.1| GENE 100 110724 - 111644 855 306 aa, chain - ## HITS:1 COG:BMEII0286 KEGG:ns NR:ns ## COG: BMEII0286 COG1173 # Protein_GI_number: 17988631 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Brucella melitensis # 33 286 5 258 264 141 32.0 1e-33 MMKQSAEKTTSKNAVKTVIPSIWRTAGGKYSLIMLAIWLVVSAISLVWTPYSLLDTDGFN TWASPSGAHMLGTDGVGADVLSWLMAGSRTNLAIALLTVVVAAAIGLLLVAAMVSRHGAL ASTSVVVVDALISIPTVLIALMLSVPFGASAAVIIAACGLAYGLNLARILRPAAMLAARS DHVESALWSGASSLRVFFTHIVPNTVPVLCVQLSMSAGTSLLAEAGLTYLGVGVGAGVPS WGHSLATSVKFISIYPMAVVWPGLVVTLMVIALNLFGDALRDAIDPLTNPALRQGEATHV ESEERA >gi|222441572|gb|ABXX02000001.1| GENE 101 111641 - 112621 992 326 aa, chain - ## HITS:1 COG:AGl857 KEGG:ns NR:ns ## COG: AGl857 COG0601 # Protein_GI_number: 15890544 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 315 5 312 316 172 35.0 6e-43 MRFVVKRLGLFVVALFGLSLLVFVLLRMLPGDVAAVIAGTNAAPERIASLRTELGLDKSY VAQYGDWMLGLLHGDLGVSTIGGKAVSAQVASRASVTFPLIIVSLLIALAIGLPLGCAAV LTRNARLRGLCHGIAIVAGAIPALWGGLLLILLFSRGSGLLGLLPAQGFPDNGWGAPLQA LASLILPALATGVTAGASIMRYTRAAVGDKASSQAVDMAMACGMTRKQAVLRVALRLATP QLVSVIGLTFAQMVTGVMVVENLFALPGLGTMLVTDVGNRDLIAVQSELFLLATFFLLLG LVVDVVHRALDPRLKDAGLVSGEVLA >gi|222441572|gb|ABXX02000001.1| GENE 102 112812 - 114467 2263 551 aa, chain - ## HITS:1 COG:Cgl2268 KEGG:ns NR:ns ## COG: Cgl2268 COG0747 # Protein_GI_number: 19553518 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 86 544 38 491 503 221 31.0 4e-57 MSQSSGAYGEADATEQKNEQHNNQPANSASTDATLNARAKSPKSKGPNKWIIAIIAVIAV VAIIVGVVVFRNNNASSDTAENGASNTVTIGLKLAPVSLDIRHQSGSAIEQVLIGNVYEG LLSRDSDNKVQPGLAKSWDISNDGTTYTFHLNENMNFSNGDTLDAEDVAWSINQLKEQQY YNANQVESLEKAEAVDSDTVKLTLSTPDSNLLWYLTGRPGLVFDKDAEYNAKTEAVGSGP YTVESFDSASKMALKANPKYWGSAHKAATENVIIKFLTDDNAAVNALKSGEVDVLSPVNA TLAKSLDTNTYQVSAADGSDKYVLAFNCANSKLADKRVRQAIRYGINHEEIIASRGNVDY ALGGPIPSVDPGYEDLTDLYPYDVNKAKEFMAEAGYSTDNPLKLTLTYANTYGTELGDQL RSQLAKIGIDLSINYVEFSTWLQDVHANGDYELSLVDHAESHDFYKWTTPDYYFHYDGKQ AQELYAKALAATDEESSANYLKQAAKAVSEDAPADWLFGYRVTVAYNKNVQGFPSKLSQT VLPLWQITKAR >gi|222441572|gb|ABXX02000001.1| GENE 103 114669 - 115952 1252 427 aa, chain + ## HITS:1 COG:SA1054 KEGG:ns NR:ns ## COG: SA1054 COG0452 # Protein_GI_number: 15926794 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Staphylococcus aureus N315 # 1 413 1 394 399 317 43.0 3e-86 MAHILLGVTGSIAAFKACHLASDWSKQGHEVRVAMTAAAQEFVTPLTFSSLTHTQTRTSM FAAQRNDGDVAHTPSDPLHINHVDDAKWADMLVIAPASADIIAKIACGIADDQLTSTVLA YSEGPKILCPAMNVHMYENAVTQRNLNACRELGWTIVEPGSGMLACQDVGKGRMEEPAAI EAAVADLLRADQPAETLPLHGLHVLVTAGPTQEPLDPVRYLTNHSTGKMGYAIAEQARDM GADVTLVSGPVTLSAPRGIDTVHVTTAQQMFNAVQEHFTQADLTIMAAAVGDFRPIEQSS EKIKKNGRVNIDLRLTSNPDILAWAGAHKTAGQTLCGFAMETQDLESNAAKKLTSKHCSM LVANNLNTPGAGFAVDTNVVTVLKPGETTDEPIIEHWNKMSKQELAERILTELAALRNTE SAESQAS >gi|222441572|gb|ABXX02000001.1| GENE 104 116011 - 116781 911 256 aa, chain + ## HITS:1 COG:lin0253 KEGG:ns NR:ns ## COG: lin0253 COG1521 # Protein_GI_number: 16799330 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Listeria innocua # 2 254 1 253 259 216 40.0 3e-56 MLLVAVDIGNTNVVIGFLDDGHIAGTYRITTKANHTSDEYGLMITQFLRLSGYAPGDVDD VIITSVVPKVMHSFRASIVKFLNIDPMIVGPGVKTGINIRMDNPQNMGADCIADCAGAYY EYGGPILVADFGTATTFNYVTADASVICGLITTGIRTGAAALWDATAQLPEVEITRPSSI LAKSTRPAMQAGLYYNFLGGIERTIAQFHREIDEDFRVVATGGLSRVFADDTDMIDIYDP DLIFKGMLHIYERNVR >gi|222441572|gb|ABXX02000001.1| GENE 105 116927 - 117376 305 149 aa, chain - ## HITS:1 COG:no KEGG:Apar_0543 NR:ns ## KEGG: Apar_0543 # Name: not_defined # Def: hypothetical protein # Organism: A.parvulum # Pathway: not_defined # 11 149 1 139 139 203 74.0 2e-51 MKVNERGVSIMNEREKTIRLWFDMWLYQKDMGIDDIFTEDVLYTESWCPQYSNRKTVKHW FQEWNTRGKVVIWEIRQFFHKDNQTIVEWYFKNEMNNGDIEEFDGVSLVEWTEDNKIKAL KEFGCNRNTYNPYQESDIPQFRNQKANWF >gi|222441572|gb|ABXX02000001.1| GENE 106 117373 - 118170 626 265 aa, chain - ## HITS:1 COG:CAC0451 KEGG:ns NR:ns ## COG: CAC0451 COG0642 # Protein_GI_number: 15893742 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 262 148 410 416 139 30.0 8e-33 MIAGNEAPQRPEDSETQLARIGHRLARLYQIMQENRRRVDEKRQELQTLVSDISHQVKTP VSNLKMATDTLLEKPMTEVERTDFIRGIRSQTDKLDFLFQALVKTSRLETVVIQLDKKSG RLFDTVAQAMSGIVYAAEKKEIAVSVDCPEDLTVSHDSKWTSEALFNLLDNAVKYTPAGG KISVSVVLWEVYVEIKVTDTGKGISESNQAAIFRRFYREEEVHEQQGVGIGLYLAREIVT WQGGYIKVISEPGKGSKFSIMLPTK >gi|222441572|gb|ABXX02000001.1| GENE 107 118169 - 118396 167 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWFKVWHRSAVNCDNRFPNACVSTKIPTRAHKQRRPARQQHRNLFCHKKQGYGDPGHGED NPIATRPNSRFTERF >gi|222441572|gb|ABXX02000001.1| GENE 108 118401 - 119048 597 215 aa, chain - ## HITS:1 COG:CAC0450 KEGG:ns NR:ns ## COG: CAC0450 COG0745 # Protein_GI_number: 15893741 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 4 212 19 225 227 149 37.0 3e-36 MSDYNLTADGYGMTSALNARTAADAIRQREFDLALLDINLPDGNGFEMCKLIKPQHPDTI VIFLTANDQESDQIRGYEAGAVDYITKPFVIGALQRKIKAMFTMLKHHRPAKDIYDDGRL FLDFPEQTASLNGKPLTLSPMEYKMLNLFRKNPRQVLTRGQLLEKLWDIDERFVDEHTLT TSISRIRSKIEADGGAPYIKTVYGMGYRWTGGEAK >gi|222441572|gb|ABXX02000001.1| GENE 109 119069 - 120481 1598 470 aa, chain - ## HITS:1 COG:BH1924 KEGG:ns NR:ns ## COG: BH1924 COG1653 # Protein_GI_number: 15614487 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 3 418 11 424 426 128 25.0 2e-29 MKLVKRLIAICCAAIMAVSAAACGANVDSRTEITVWSWEPSMKQVIASFEKENPDIHVIW KNTSGYDNLNNAIQDGYGIPDVVQLEYYALRQYAVSGQLVAITGRTEGYGDFYTPGTWAS VQLNGRVYGLPMDSGPMAFFYNDSVFEQVGIDASKIRTWDDYYEAAKKLKSIGVYIAADS GDASFYDTMIWLAGGRPFSTSNDGKNVTINLTDDEGTRTFTEFWQKMIDEGLVATNLTTW SDGWKEAVGEGKIASMFSGAWLPSLLMSNLPGTAGLWRVAQMPTPDGSYTTSENGGSALA VLQRSRKPEASYRFIEYACHNAEGIKARVDGGAFPADNITLSDREFLRKTTVTDERGIEI PYFGGQEYNRVLSQAAENVSTGYQYLPFEVYARSDFRTTVGKAYKWSSRLRKEQDRLNII AAGGKVSDKSAIGDALKETDSADRLKLKSGIALWQKDLKEYGANQGFTIQ >gi|222441572|gb|ABXX02000001.1| GENE 110 120696 - 122054 1611 452 aa, chain - ## HITS:1 COG:AGl3319 KEGG:ns NR:ns ## COG: AGl3319 COG1653 # Protein_GI_number: 15891778 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 44 342 26 325 423 135 34.0 2e-31 MKFTASKKTIALVAAAAMLTSVAACGSSSNSSSSGVTEGGKTEITVWSWDSTLPRTVKDF EKANPDITVKVTNAGTNKTEYTALNNALSAGKGAPDLVQIEYYALPEYQVRGEIEDLSQF GAGKFSDFYTPGTWASVKLNGGVYALPMDSGPMAWFYNKDVFDKAGVDPTRVRTWDEFYD AAKKVRATGSYITSDSGDAGFFDSMTWLAGATPFSTGSDGQSVTINLSNDSKVKTFVDFW QKMIDDDLIDTKTAGWSDDWNKSLNDGSIASLLTGAWMPYNLLSGAPDGEGKWRVAQMPT PDGSETNSENGGSSLAMVKTDDKAKAEAAYKFAEYACHNAEGIKTRVAGGAFPADNDTLA SDDFLNMTSLTDSDGNAHEYFGGQKFNEELAKAAANVSTGYKFLPFEVYARGVYSDDAGG AYTDKSVTLAEGVQAWEKNIKDYASQQGYTVK >gi|222441572|gb|ABXX02000001.1| GENE 111 122333 - 123892 830 519 aa, chain + ## HITS:1 COG:BH1861 KEGG:ns NR:ns ## COG: BH1861 COG3534 # Protein_GI_number: 15614424 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Bacillus halodurans # 5 517 4 497 500 447 44.0 1e-125 MTSGTSTITVQKNSAIADIPPRIFGSFVEHLGRCVYGGIYEPSHPTADENGFRQDVINLV KELGVTCVRYPGGNFVSAYNWEDGTGPRGQRPIRRDLAWHSTETNEVGIDDFYRWSKKTG TEIMLAVNMGTRGLKAALEELEYVNGAPGTELADRRVRNGITEPMDIKMWCIGNEMDGPW QVGHMSPDEYAAAVDRVAHAMKLAESGLELVACGSSSAHMSTFGSWERSVLTKAYDNLDF VSCHAYYYERGAKSLQDYLASSQDMQTFISTVAACADEAKNAHTGDHDIALSFDEWGVWY SDVWNQQEAEWKAQSGKDLHHESWPKAPRLLEDIYNAADAVVEGSLMITLLKHCDRVRSA SRAQLVNVIAPIMAEKNGPAWRQTVFYPFAEAAQHAHGIAYSPVIDSPNVETESFGLVNA LDSVITWDETNHSGLLLMVNRDASDAHKVTASLSQLPYFDISDFHIDKAIILHDDNPYQR NSADDPTAVTPQELHATIDNGSVHCTLPAISWAAVEFHA >gi|222441572|gb|ABXX02000001.1| GENE 112 123991 - 126060 2456 689 aa, chain - ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 19 689 8 672 672 413 36.0 1e-115 MTQRRAYRWPQPLAGQQERIWYGGDYNPDQWPEEVWDDDVRLMKKAGVNLVSVGIFSWAK IETSEGVYDFDWLDRIIDKLGEAGIAVDLASATASPPMWLTQAHPEVLWKDYRGDVCQPG ARQHWRPTSPVFREYALKLCRAMAEHYKGNPYVVAWHVSNEYGCHNRFDYSEDAEHAFQQ WCEERYGTIDAVNDAWGTAFWAQRMNDFSEIVPPRFIGDGNFMNPGKLLDFKRFSSDALK AFYIAERDTLAEITPDLPLTTNFMVSASGSVLDYDDWGDEVDFVSNDHYFIPGEAHLDEL AFSASLVDGIARKDPWFLMEHSTSAVNWREINYRKEPGQLVRDSLAHVAMGADAVCYFQW RQSKAGAEKFHSAMVPHAGEDSAVFRDVCELGADLNKLSDEGILGSRLAKSRVAVVFDYE SEWATEHTATPTQHVHHVDEPLAWFRALADQGVTADVVPVRGAWDDYEMVVLPSVYLLSE ETTRRVRDYVVGGGRLVVTYYTGISDEKDHVWLGGYPGSIRDVVGVRVEEFMPMGDDFTG VPDRLELSNGAVAHDIADVIGSVDGTATVLETFKDDPWTGMDGAPAIVAHTFGEGRSVYV GARLGRDGIALSLPEILDSLGMAEAGGNDGRVLHVEREGADGSRFVFSFNRTHETVRVPV EGEVVVSSFADVDGETASIKPNGVIVTKQ >gi|222441572|gb|ABXX02000001.1| GENE 113 126100 - 127113 1277 337 aa, chain - ## HITS:1 COG:SP1681 KEGG:ns NR:ns ## COG: SP1681 COG0395 # Protein_GI_number: 15901516 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 79 336 30 278 279 140 32.0 4e-33 MSDATIAAGTEQRLTAQELKAQEKAAKKTEKERLKRVARDEKAERKRAAKSGFANVANPR RSTLLTIVCALFAVYCLFPFVYLLINATKTQADFTSTFGLGFGRTFALWDNIKTVFTYQD GIFGRWFLNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAV PQFLLFAKLNLTNTPWAMIIPSLVSTFGLYLMWIFSDQAVPTELLEAARVDGAGEFRTFF QVSLPLLAPGIVTTALFTIVATWNNYFLPLIMLKDSNWYPLTIGLNQWKDQASTAGGQAI QNLVVTGSLITIVPLVIAFLCLQKYWQSGLAAGAVKE >gi|222441572|gb|ABXX02000001.1| GENE 114 127171 - 128100 1213 309 aa, chain - ## HITS:1 COG:AGl458 KEGG:ns NR:ns ## COG: AGl458 COG1175 # Protein_GI_number: 15890337 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 29 307 33 312 313 129 32.0 8e-30 MSATEVVANMPLHSATVRVNKHKADWRGWKFMWPFALVFVFVFVIPILYAIYISFFQKQM IGGTKFVGISNYIRLFHDQQFWSSVGRVALFTCVQVPIMLFLSAAMALALDSMKLHGAKF FRISTFLPYAVPAVVSTLVWGFMYGAKYGLVGSLNDWLGTNLDVLSPSVLLASIGNIVTW EFTGYNMLIFYSSLSTIPHSLYEAASIDGAGEWQIVKSIKLPELKGSLAITVIFSIIGSF QLFNEPSILQNMVPGNAITTYYTPNMYAYNLSFAGNQSNYAAALAITMAVITMAIAYAVQ LNSMKEQMK >gi|222441572|gb|ABXX02000001.1| GENE 115 128337 - 129344 868 335 aa, chain + ## HITS:1 COG:BS_ccpA KEGG:ns NR:ns ## COG: BS_ccpA COG1609 # Protein_GI_number: 16080026 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 4 320 2 322 334 142 32.0 9e-34 MARNSVSLQDVAREAGVSPQTVSRVANGSDAVRPATKLKVEAAMEHLGYRPNYAARALKS GHFNNVGVLLSHMSAYGNSRILEGITTAAANSGYSITIRPLDNLQDQSLAGALKLVEGLP LDGAIVIMERDFTDFNQFKPSDNLPVVLICEEPANHCPTIDSDSYGCATAAVDFFLSKGH KTVYHIAGPTVSRAAQSRIRGWRDALAQVGIPTPPMYYGDWEADSGYQAGLALAHEKDCT AIFAGNDQMAYGAMLGLRTAGKRVPEDVSIIGVDDSLRGVVPRLELTTIRLKLRTVGKEA FSMIEQQCNGKKVPSGIKKLITPEFIDRGSVAELD >gi|222441572|gb|ABXX02000001.1| GENE 116 129476 - 130768 1567 430 aa, chain - ## HITS:1 COG:SPy0324 KEGG:ns NR:ns ## COG: SPy0324 COG3633 # Protein_GI_number: 15674487 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Streptococcus pyogenes M1 GAS # 8 409 1 402 404 374 56.0 1e-103 MNHISKALRGVADKYNGVSLIIRIIVGLIAGTALALVVPHMTWISEFGTLFVSALKAVAP ILVFVLVASALAQGNSKLDGRFGTVLFLYLFTTFLSAVVAVLTSRMFPQTISLGDAADAD VVPQGLSEVVQTLLTNIVANPIQAMIDGNYICILMWACLFGLAMKGIANESSKAFLANVA DGVSQVIRWVINLAPFGIMGLVFTSVSENGLAAFTEYGSLLLLLVGTMLLMVLVFGPLVI FLYLHRNPYPLVYRCFKESGLTAFFTRSSAANIPVNMQLCEKLGLDKDMYSVSIPLGATI NMNGAAITITIMAMAAANTMGIQISLPAAILLSVVSALGACGASGVAGGSLLLIPMACSL FGISNDIAMQVVGVGFIIGVIQDSVETCLNSASDVEFAATAEYHAWLKQGRQLPAFMYSK KERQQLGIEA >gi|222441572|gb|ABXX02000001.1| GENE 117 130983 - 131735 439 250 aa, chain - ## HITS:1 COG:Rv3300c KEGG:ns NR:ns ## COG: Rv3300c COG0564 # Protein_GI_number: 15610436 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Mycobacterium tuberculosis H37Rv # 10 245 72 285 305 191 46.0 9e-49 MRQQRQQKRHRYVLEEPHIPFECEVLYENDAIIVVDKPHFLATTPRGMWYRETALIRLRE QYGEPDIVPAHRLDRLTAGIIVFVRKPELRGAYQMLFQNRKTIKTYECLAPLAPEQHPQY GTIVRIDRHQPFPAIRASHICKDRGRLQAYEIPETINAQTLIERGSTVRCLDGKAYVNYV LHPKTGKTHQLRVHMNSLGLPILGDDFYPNIVQRSYDDFSQPLELVARELRFDDPVTGEP RTFVSKVPLG >gi|222441572|gb|ABXX02000001.1| GENE 118 131747 - 133639 2309 630 aa, chain - ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 630 3 625 625 747 59.0 0 MCGIVGYAGNVETACGKPLEVCLQGLQRLEYRGYDSAGVALTAPGMDHVEVRKKAGRLAN LIEDVERNPMPMATVGIGHTRWATNGVPNDINAHPHTSRDGKVAIIHNGIIENASQLRLD LQTEGYRFSSETDTEVAAKLLGKISEKIVEETGKPDLFKAVRRLARMLEGAFTILATDCR QPGIVVGARHDSPLVVGLGEGENFLGSDVAAFVAYTKRAMEIDQDQAVMVSADKVVVSDF MGNIVADPKTYTVDWDASAAEKGGWDSFMDKEIHEGPAAVQRTLLGRLGKDGNLNLDEVR IDEHDFKAIDKIIVIACGTAAYAGMVAKYAIEHWVRIPVEVELAHEFRYRDPILTPRTLV VAISQSGETMDTLMALRHAREQGSKVLAICNTQGASIPRESDAVLYTHAGPEVAVASTKA FVAQITAAYVLGLYLAQVKGAMFRDEIAQALDSLKDMPRKIQWVLDTQTKTVHDAAAQMV DAKSFLFLGRHVGYPVAMEGALKLKEIAYTFTEGFAAGELKHGPIALVDEGEPVVFIVPP ARGRNVLHAKVISGIEEVKARGAYIIAVAEENDPDVERYADVVFWRPACPTLMSPLVDVV PLQLFAMDMAKLKNYDVDKPRNLAKSVTVE >gi|222441572|gb|ABXX02000001.1| GENE 119 133831 - 134625 593 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 13 263 2 242 245 233 48 1e-59 MTEPTTNGVVPAVKATQVHKAFGSLHVLKGVDMTVMPGSVTVILGPSGSGKSTFLRLINQ LETLTGGEIDVDGEMIGYKYVDKDGKQVLQTLNDKEVAEQRSKLGMVFQRFNLFPHMTAL ENVMEAPVHVKHMDKKEARKLAIEELNRVGMGDRLDHYPAQLSGGQQQRVAIARALAMKP EIMLFDEPTSALDPELVGEVLNVMLSLAKEGMTMVVVTHEIGFAREVADQIVFMDGGVVV EQGGPEIIDNPQEPRFKDFLQHVL >gi|222441572|gb|ABXX02000001.1| GENE 120 134638 - 135621 1373 327 aa, chain - ## HITS:1 COG:Cgl1299 KEGG:ns NR:ns ## COG: Cgl1299 COG0765 # Protein_GI_number: 19552549 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 14 287 15 282 316 253 52.0 3e-67 MAKKQIDGDGLDIPNRIKALPVKRTGPIVAAVVVALLAAMLLQGLITNPRFEWNVVWKYL FNENVLEGIKYTLLLTVISMGIAIILAVILAVMRKSINPVLRGVSWFYIWFFRGTPVYTQ LVFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGL EAVDPGQTEAAKALGMKRSMIMRRVVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLE LQFATTAIATRLYKPIPLLIVACIWYLVITSILMVLQSRLEKHFGKGFDARPAGARGKQP PLPGKTEGEPKDDIAKQNEATFAGMTA >gi|222441572|gb|ABXX02000001.1| GENE 121 135667 - 136596 1370 309 aa, chain - ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 6 309 39 334 334 146 32.0 4e-35 MSLKIKSVVALALSAAMLFSTAACGTSEASNSGDSSDSSNATTGYDVSTIKKDDELAKLV PSGDLVKDGELSAGMELSYAPAEFYAEDGKTPVGYDIDMTKAIAKTLGLKPNIVSSMFDT IIPSIGSKYDLGITAMTITEERLQSVDFVSYYRAGSTWAVKKGNPKKLDTSGMCGAKIAV QTGTVQEEEANTIAKGCEADNKAEVMSYKRQAEAATAVATGKADAFYADSPVAGYAISQT DGQLEALGDVEGVAKQGIAVKKGNTQLAEAVQKAVQKLMDDGTYMKILKHWGVESGALDK AEINPTDLD >gi|222441572|gb|ABXX02000001.1| GENE 122 136702 - 136881 63 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225350855|ref|ZP_03741878.1| ## NR: gi|225350855|ref|ZP_03741878.1| hypothetical protein BIFPSEUDO_02429 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02429 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 59 35 93 93 99 100.0 8e-20 MLHVRYIAQTLRISQESRNVAPSNHGRSIYENGRHADLTRMPSVISASQYRRVRCLPYV >gi|222441572|gb|ABXX02000001.1| GENE 123 136886 - 137827 1322 313 aa, chain - ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 34 313 55 334 334 156 34.0 4e-38 MAFNNLRKLAVFALSAAMIVSLGACGTSEKSDSAASSDSESSSNTTGYDVSGVTKDDDIA AMLPESVTKDGKLTVGMDTSYAPAEFLAEDGKTPVGFDVDIAKALANMFGLEVVPQTSNF DSIIPSIGTKYDIGISSFTITPERMEAVDFVSMFKAGSTWVVKKGNPNKVATSDLCGLKI AVQTGTTQEEEVNAAAKQCKADGKSEVQILSNKLQTDVTTNVATGKADVFYADSPVAGYA IAQTEDTLEALGEDVGVTKEAVAIKKGDSDTAKAVQAALQKLMDDGTYMKILKHWGVENG AIDKAEINPTDLD >gi|222441572|gb|ABXX02000001.1| GENE 124 138071 - 139018 1224 315 aa, chain - ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 8 310 39 329 334 156 33.0 6e-38 MEAKKSLKAVAACALSVAMLFAGAACGTSDGSDDAASSDSGSKASELTGYDVSSVQKDDD IAKLLPDYVTKDGKLTIGMDTSYAPAEFLAEDGKTPVGFDVDIAKALAQVFGLEADPETA NFDSIIPSVGSKYDIGISSFTVTKERLEAVDFVSHFDAGSAWAVKKGNPNKIDTSDLCGK KVAVQTATMQETEANKIAKQCEADGKDKLEVISSKLQTDVTTNVVTGKADVFYADSPVAG YAIAQTDGQLEMLGKVEGVAPEGIVIKKGDSQMDEAVQKAVQKLIDDGTYLKILKYWGVE DGAIETSEINTPGAE >gi|222441572|gb|ABXX02000001.1| GENE 125 139149 - 139628 666 159 aa, chain - ## HITS:1 COG:ML0671 KEGG:ns NR:ns ## COG: ML0671 COG0691 # Protein_GI_number: 15827281 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Mycobacterium leprae # 6 151 8 152 160 146 54.0 2e-35 MAKEQGVKPIAQNKKARHDYAIEDKYEAGLVLTGTEVKSLREGRASLAESFITIDRRGEM WLEGANIPEYLNGTWNNHAPKRKRKLLLHAAQIDKLARQSQAKGFTIIPLSLYFKDGRVK AEIALARGKKEFDKRQALREEQDKREALRAMRYANKQVR >gi|222441572|gb|ABXX02000001.1| GENE 126 139771 - 141159 1508 462 aa, chain - ## HITS:1 COG:SA0710_2 KEGG:ns NR:ns ## COG: SA0710_2 COG3942 # Protein_GI_number: 15926432 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Staphylococcus aureus N315 # 319 462 1 134 134 80 40.0 5e-15 MTSKKALKPAVAVFATGALCATMAIAPFSSAVPQAQANTYSNLVNAQNKKAASSQREAQL RSQLSGVKSDLADKIVELDELTNTKIPAAQAAVDEANATAASAQSEADAAASRLEAAQKD KENLEAQIEQTGKDYDDAHAAVAQMAREDLHGSDASTVMSVVTGSTSTQEFINSMQSRDA LSRTEANAASDAANTLNTSMNRSERLSAIEKQIANLKTAADEKAASAQQAAASAQTQRDS LDQLRAEGETRRAELESQQSQLNGSVAKQAAQTVMLQSQVDSFNRQYAAEQAAAANQNNG GNQGQTRPGNNNTNSGGNNVTPAPTPTPTPTPAPAPSTNNNSGQGTSNGDYGNGYVAGQC TWWAYERRRQMGIGTPSYLGNGGQWYATAPSYGLRVDHSPQVGAAISFLPGQAGADGFYG HVGVVEAVNGNTITISEMNAAGGPYVVSYRTLYNASQFWYVH >gi|222441572|gb|ABXX02000001.1| GENE 127 141259 - 142182 945 307 aa, chain - ## HITS:1 COG:ML0670 KEGG:ns NR:ns ## COG: ML0670 COG2177 # Protein_GI_number: 15827280 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Mycobacterium leprae # 1 283 1 273 297 130 30.0 3e-30 MRLRFILSETWSSLKRNVPMLLSVMLVTFISFLFIGASVLTQAQITKAKGDWYSKVEVVV WMCPDGTSQSVNCTAGTAATQTQINDLQKTIRNELADDVSQITFVSKEDFYNDTFLKQYP NGEYQGRTLTADDMQDSLWLKLKNPEKYQVVSEVLSGKEGVDTVSDQRQIFEPVFAVLNR ATIATAALAAVMVVVAIMLTGTTIRMSAASRRTETEIMRLVGASNWTIRLPFILEGVIAS MVGSLLSCVTLSALVKVFITDWLAASVKWIPYVNQMTVLWISPILVAGAVLLSVIASTVS LHRYLKA >gi|222441572|gb|ABXX02000001.1| GENE 128 142182 - 143483 1574 433 aa, chain - ## HITS:1 COG:MT3186 KEGG:ns NR:ns ## COG: MT3186 COG2884 # Protein_GI_number: 15842673 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase involved in cell division # Organism: Mycobacterium tuberculosis CDC1551 # 3 227 1 225 229 278 60.0 1e-74 MALISLEHVSKVYPKGTRPALDDINLDIDRGDFVFLVGASGSGKTTLLSLLLREEEVTDG EIRVAGNDLRRLSSRQVPHYRRSIGFIFQDYKLLNNKTVWENVAFALEVIGTSRSTVKSL VPKVLQTVGLTGKENNYPHELSGGEAQRVAIARAYVNHPQILLADEPTGNLDPTTSLGIM EVLDAINRTGTTIVMATHNEEIVNSMRKRVVELHTGKIVRDEQQGSYDSALYFPDAEVES KSHQALNGGDVDSKYRAPGALEMSDFSDEAVDVEGATRAETAANAVDAVAAAIHSGNGDA GIARLANSVHSGRTGRYGEAFAPVETTLTWGKGLKLEDLAEQEHADSAARSQTEANADAT GSSPDTGMESSKAAENEQSAEPTVPAPPALPMPPAPPAPPAPPAAPAATAGGEAKSVEQS DEQHETSESKEND >gi|222441572|gb|ABXX02000001.1| GENE 129 143533 - 144663 1556 376 aa, chain - ## HITS:1 COG:Cgl0778 KEGG:ns NR:ns ## COG: Cgl0778 COG1186 # Protein_GI_number: 19552028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Corynebacterium glutamicum # 5 370 4 367 368 399 58.0 1e-111 MAEFDFSQAIGEARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLS AVQSQLKRLASASQRIDDVETLVELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDG EYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATF QVDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRV DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE EEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI RWRHEQRRAAAEEADA >gi|222441572|gb|ABXX02000001.1| GENE 130 144847 - 144978 88 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDYRSEREQRERRRRTMVRAVCIVIAAAMLLSLVIPAIYAGL >gi|222441572|gb|ABXX02000001.1| GENE 131 145107 - 145586 554 159 aa, chain - ## HITS:1 COG:BS_yydA KEGG:ns NR:ns ## COG: BS_yydA COG1576 # Protein_GI_number: 16081075 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 159 1 159 159 186 61.0 2e-47 MKISLITVGKVKEQYLRDAIAEYSKRLSRYCKLDIVEVADEKTPEHASEGVERQIKAKEG ERIAKHIRDDAFVIALAIEGQQLTSEELAQKIDGLGVHGTSHIQLIIGGSLGLDPTIVKR ADYLLSFSKMTFPHQLMRVILLEQLYRACKINAGEPYHK >gi|222441572|gb|ABXX02000001.1| GENE 132 145596 - 146585 1502 329 aa, chain - ## HITS:1 COG:Cgl1082 KEGG:ns NR:ns ## COG: Cgl1082 COG2171 # Protein_GI_number: 19552332 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Corynebacterium glutamicum # 6 329 3 297 297 294 52.0 2e-79 MTDQRTAWGWGLSSVDAAGNTLDVWYPELKLGEAPEEVARPNHNFGNLAHEGVDARGVRR IPVFTVSKLDEPIEDAADAYLRLHLLSMRLAKPNTLNLDGIFAALNNVVWTNYGPFAVED FALRKLDVMAAANQCVPGLPKVDVNVLSIDKFPCMVDYVVPTGVRIGDADRVRLGAHLSE GTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGNGSDIGGGASIMGTLSGGGKLKNSIGE HSLLGANAGIGISLGDNCVVEAGLYVTAGTKVTIYDKAKVAAGEPLETVKGADLSGKDNI LFIRNSVSGRIEARYRKTGIELNEKLHKN >gi|222441572|gb|ABXX02000001.1| GENE 133 146696 - 147988 1536 430 aa, chain - ## HITS:1 COG:MT0920 KEGG:ns NR:ns ## COG: MT0920 COG0372 # Protein_GI_number: 15840315 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 3 430 7 431 431 455 53.0 1e-128 MATANLSVESKDFTLPVVEATAGADGIVVSTLRNDGWVTLDPGFLTTAQCESKITYIDGK NSILRYRGYPIEQLCEQSDFLEVAWLLRHGELPNQEQYDRFISDINHRTMVGEDFRTFMG SFPRTAHPMSVMASAVNALATFYPDTTDINDSDQLDEAATIIMAKARTIVSYIFRRRRDE PMLYPDYSRGYVDDFLRMCFAVPYEPFDSDPLYVHALGRLLIIHADHEQNCSTSVVRIAG SAHANLYSAVAAGINALSGPLHGGANEAVLRQLKAIRDSGKTVKEFVEDAKTSGQRISGL GHRVYKSYDPRAAIAKKYLQKIMERADTLKLPADERALFDVATELEKIALNDEYFVSRHL YPNVDFYTGLIYRAIGFDPSMFTTLFALGRIPGWIAQYREMLADPNTKIGRPRQVYTGYT ERDYTPIDRR >gi|222441572|gb|ABXX02000001.1| GENE 134 148241 - 149020 1028 259 aa, chain - ## HITS:1 COG:aq_076 KEGG:ns NR:ns ## COG: aq_076 COG0024 # Protein_GI_number: 15605674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Aquifex aeolicus # 2 255 3 256 258 191 40.0 1e-48 MIELKTPKEIEEMKPAGRFVGGILRDLKEFTKVGTNLLEIDEFVHKRIVDRKGAESCYVD YAPDFGTGPFAHYICVSVNDAVLHGVPFDYNLKDGDLVSLDLAINVDGWVADSAISFVVG EHKDPEDLRLIKCTEEALAAGIAAAQPGNRLGDVSAAVGDVAREYGYPINLEFGGHGVGR IMHGDPHVPNDGRAHHGYKLRPGLVIAIEPWFLKTTDEIYQDPKDGWTLKSSDGSRGAHS EHTIAITDNGPVILTVRDK >gi|222441572|gb|ABXX02000001.1| GENE 135 149174 - 151255 2584 693 aa, chain + ## HITS:1 COG:MT0208 KEGG:ns NR:ns ## COG: MT0208 COG3590 # Protein_GI_number: 15839578 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 1 693 1 662 663 546 44.0 1e-155 MSTTLNSGIDPASFSAVTGPAQDLFRYVNGPWIDMYRLPDDRSRYGSFDKLAEDAENQIR EILEDDDCPAEKSHALYASFLDVDAINASGLAAIEDQLKAIDVAADKAELTRSLGAMNPA GGPDLIGIAVYGDPGAPETNIIHIEQSGLGLPDEAYYREDHYAPIREAYVDMVAKQLKNA KLAADDEQAEAQAQRFLDVETRIAANHWDNVATRDSVKTYNPTDYAELSGMLADYDLDTW IESWQSAYDQTSAAQVQPLDFRGIFNHVVVHEPSFLTGLNAFWKAADLDDLKLWARVHVI IGSTLELPHEFDETNFEFYGKTLSGQKQQRVRWKRGVSLVNGICGEDVGREYVKRHFPES SKQRMEQLVGNLIDAYRVSISNSAWLGEETKQKALEKLSKFVPKIGYTNHWRDYSALDVH ENAGFAENMRAANLYETGYQLAKVGKSVDKDEWLMNPQTVNAYYEPTMNVIVFPAAILQP PFFDPNAEDAANYGGIGAVIGHEIGHGFDDQGAQYDGDGKLNDWWTEEDKANFEQLTQKL IDQYNAFVPTQLAEKYADDPAQAPHVNGALTIGENIGDLSGVNIALKAYAFALDEAAGRE KNGSTESIEASLSEAPEIDGFTGLQRFFLSYASIWRTKNRDELAEQYLQIDPHSPAECRT NGIARNVDLFYKAFDVKPEDGMWLDPDQRVRIW >gi|222441572|gb|ABXX02000001.1| GENE 136 151311 - 151847 409 178 aa, chain - ## HITS:1 COG:Cgl2925 KEGG:ns NR:ns ## COG: Cgl2925 COG0629 # Protein_GI_number: 19554175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Corynebacterium glutamicum # 1 111 1 111 225 61 35.0 7e-10 MAQQQALITITGYVGANPTQFNKDGMPHASSFRMASTRRYFDNRTQQWKDLPTTWITVKA YRNLSENICQSLKKGEPVIVMGALATETWADQNGKPQSRIVLEASAAGHDLNRGVTTLRK FVKPNDQHQPEAKGTEPRVGADPFVRQGSVAPVEIVVPEDDEAAEFSGDTGEFDGDIY >gi|222441572|gb|ABXX02000001.1| GENE 137 152263 - 154080 2387 605 aa, chain - ## HITS:1 COG:Cgl1948 KEGG:ns NR:ns ## COG: Cgl1948 COG0442 # Protein_GI_number: 19553198 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 585 5 569 588 587 53.0 1e-167 MSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENIIREEMA SIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDLY SSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYE RIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEA IDFSNTPAAEKRPTPNAETIDQMVEFANANHPRSDGRAWEASDILKNVVIAVMHPQDDEH DEPWRELVVVGVPGDRTVDMKRLEAQFTPAEIEEATDEDLKKHPELVKGYIGPMAFGPQA RGGEKAENANETGEALRYLIDAHIARGSAWFTGADEAGVDYYDLVYGRDFEADGVVEAVQ VRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVS RVMACIAETHHDEKGLAWPAIIAPAQVHVVATGKDAAAFEAAEQLIADLEAKGIEVIFDD RKKVSPGVKFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAARVIADRV AALLK >gi|222441572|gb|ABXX02000001.1| GENE 138 154244 - 155650 1247 468 aa, chain - ## HITS:1 COG:SPBC887.14c KEGG:ns NR:ns ## COG: SPBC887.14c COG0507 # Protein_GI_number: 19113280 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Schizosaccharomyces pombe # 9 431 321 781 805 227 33.0 4e-59 MRQAEALAILQSGASVFLTGAPGAGKTYVLNEFVRQARAEGAAVSVTASTGIAATHINGQ TIHSWSGVGLANALTDNLIKTIRTRRKRKLQGADILIIDEVSMLHAWLFDMVDQVCRIIR RDQRPFGGLQVVLSGDFFQLPPVSVGGRNHDLVTPSPEFVASRERYAKAGLNPDGFVTES LVWRELNPAICYLTEQHRQDDGSLLTVLTDIRNGCVNDDDRNVLLTRLGTIPEPGQQAVN LFPVNKQADTLNDMRLFEINEEPHEYFAEAAGPVNLVERLKKNMLAPERLQLKTGAAVMA VRNDTDHQFVNGSLGTVRGFAAENKGGWPIVEFENGNIVTMKPNCWEMMDGDTVLASVNQ VPLRCAWAITIHKSQGMTLERAVMDLRRTFAPGMGYVALSRVEGLQGLYLNGVNERMFLV SPDAVRLDGELRLASAQASDMLAHDGIAAFRQNIAVPDGDEFAQDALF >gi|222441572|gb|ABXX02000001.1| GENE 139 155704 - 156603 907 299 aa, chain - ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 19 298 15 275 277 218 43.0 2e-56 MERTPVSAADWTSIEIPQDIRLVVADMDGTLLDEHSEIPQGFWPMLARLRSRGVEFVPAS GRQYATLRAMFADKAAQVLDGGELSYIAENGNVVAIDGNIAEVHGVDTDVTRWTIDTVNA SAAAGEYDMGLVLCGLRTAYVQRTDKPFLDEVGKYYAALEIVDDLHSVLEDVIASNGESD TMLKLAILDFDDAEAMAAEKLTPLKNDYQVVVSGKLWVDIMNATTNKKQGVEALQRVLGV TAAQTAVFGDYLNDLQMLSAGQWSFAMGNAHPALKQAAHFVAPSNADHGVLQVVDKLIA >gi|222441572|gb|ABXX02000001.1| GENE 140 156652 - 157302 794 216 aa, chain - ## HITS:1 COG:MT2586 KEGG:ns NR:ns ## COG: MT2586 COG1949 # Protein_GI_number: 15842039 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Mycobacterium tuberculosis CDC1551 # 17 207 5 196 215 182 47.0 5e-46 MVDAHDGETYTAKDSRLIWIDCEMTGLDIFHDELCEISVVPTDFDLNVLDEGIDFVIKPS NAAVANMNDFVRAMHTRSGLINEWENGLSVEEAERKVTEYVARFTPDGVKPLLAGNSIGS DKKFLDRYMPNLMEHLHYRVIDVSTFKELARRWYPAVYNNRPPKNGGHRALADIIESLDE LRYYRKAFMAAAPGPDAAEAKAIADQIVATSILNNN >gi|222441572|gb|ABXX02000001.1| GENE 141 157575 - 159119 2051 514 aa, chain - ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 221 510 1 291 292 347 61.0 4e-95 MATIPDMNADSTYAPLPPIFAQLGLAYDDVLLLPNETDVIPSEVDTTTHLTRNITMKVPA ISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDDQAAQVDIVKRSESGMINDPLTVSPDV TLADLDKLCGRFHISGLPVVDNDNKLVGIITNRDMRFIASEDYDRLKVSEVMTRENLITG PSNISKEDAHDLLAKHKVEKLPLVDDEGHLTGLITVKDFVKTEQYPDATKDEQGRLRVAA GIGFLGDAYNRASALMEAGVDVLVVDTANGEAKLALDMIRRLKSDSAFKGVDIIGGNVAT RQGAQAMIDAGVDAVKVGVGPGSICTTRVVAGVGVPQLTAVYEAAQACRAAGVPCIADGG IHYSGDIAKALVAGASTVMLGGTLAGCEEAPGEKVLLHGKQYKLYRGMGSLGAMAPRGKK SYSKDRYFQADVTSNDKVVPEGVEGEVPYRGPLNAVLYQMIGGLHQSMFYIGAHNIAEMP ERGRFIRITDAGLRESHPHDIVMTAEAPNYSGRQ >gi|222441572|gb|ABXX02000001.1| GENE 142 159224 - 160384 1131 386 aa, chain - ## HITS:1 COG:Rv1302 KEGG:ns NR:ns ## COG: Rv1302 COG0472 # Protein_GI_number: 15608442 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium tuberculosis H37Rv # 1 358 30 393 404 224 38.0 2e-58 MRIYLFIAAIAGGVTYLITPLIRHIAIEIGAVGEVRARDVHTIPTPRLGGLGMLIGFTVS MLFASRIPFIQGLFAQSQQAWVILAGAIMISLLGMADDLWDLDWMLKLAGQLLISVFVAW GGLQIISLPLGSLVTASPSLSMAITAFLIVASINAVNFVDGLDGLSSGIVAIGGIAFAIY SYIIARNSPSYASMATLIDIAMVGMCVGFLMHNWHPAKLFMGDSGSMLLGYLITCASIVM TGRLDPASIHASIYLPVFMPILLPILVLFLPILDMCLAIVRRLRKGQSPMHPDRMHLHHR MLRIGHSVQGAVLILWGWAALIAFGSIMTLFFKAQYVLVGFLIAAVVLTVATMYPYVKHR IPEMLEEDAADGGRHASVRSSKRRKN >gi|222441572|gb|ABXX02000001.1| GENE 143 160381 - 161043 833 220 aa, chain - ## HITS:1 COG:MK0635 KEGG:ns NR:ns ## COG: MK0635 COG0009 # Protein_GI_number: 20094073 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Methanopyrus kandleri AV19 # 11 211 12 205 212 95 37.0 5e-20 MSEIRTISDESLAQAVEIVRDGGLIVIPTDTVYGVACDPRNIEAIRKVFAAKQRPKYKSL QVLLPSIESMEKLHLDLPVPLNRLSAMFMPGAFSPIAVADDDCTLATVRTDPATGKVTQG VRIPNSTAALRVLRATGPLAATSANRSGDESAQTVDEAVQALGDAVDLYLDGGATPGHVA STVVAADPHGRDGIAILREGVIHEPVIRKALTLNGGALGV >gi|222441572|gb|ABXX02000001.1| GENE 144 161115 - 161819 298 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 231 245 119 29 2e-25 MLQIKNLSVSYGAIEAVKNISLTVNDGEIVSLIGANGAGKTTTLHTITGLTPAVSGEVLF NGVDLLKTPNNKIMTLGMAHIPEGRHVFTRMSVQENLEMGAFSLKDRSHMADDLAMVFDM FPRLKERRNQKAGTLSGGEQQMLAMGRALMSHPNTILMDEPSMGLSPKLVKEIFAIIRKL HDQGITVLLVEQNANMALSIADRAYVLETGRITMEGDAKELMDNEQVRKAYLGA >gi|222441572|gb|ABXX02000001.1| GENE 145 161819 - 162640 243 273 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 246 1 231 245 98 27 5e-19 MSEPILKAEHLGITFGGLKAVSDFNMTINAGELVGLIGPNGAGKTTVFNLLTGVYQPTEG EFFLDGKRMNGKKTYQVVRAGIARTFQNIRLFDQMTVEENVLVAFNESFTYRLGGAIFRT PTFWKQERDMHAKAIDLLRIFGLEGLAETEAANLPYGAQRKLEIARALATGMKLLLLDEP AAGMNPTETEDLLNCINTIRDRFGIAILLIEHDMSLVMNVCQRIQVLDYGRTIASGTPEE IANNPQVISAYLGTDDAENNAVETSETTERKDA >gi|222441572|gb|ABXX02000001.1| GENE 146 162637 - 163752 1406 371 aa, chain - ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 44 324 4 271 285 235 51.0 1e-61 MLSTKQSYALCAIGVLVLFGILVAVCETGAISLYVKGILMTCCIAVIMTTSLNLTIGVLG QLTLGCCGFEAIGAYSAALMSKLLVANGVQMDDTVRFLLVTFVGGVVACVFGVLVGIPAL RLHGDYLAIITLGFGEIIRVIIQNLKVAGGKGLADGQQGQALIGIDRLANLYVVFCITVV TVVLLFMFARSRYGRAVKAIRDDEIAAGASGINITYMKVLVFAISAFFAGIAGGIFAQYI GALTPSMAGWLQSINYVIMVVFGGMGSLTGSIVAAVGLTILPELLRAFSAYRMLVYSVVL VIIMVFRPQGLFGNWEFSLPKFVNTWFYPVRVKMHGKSGASQSASKKTKETGETTASSEI NTSSEDKEVQA >gi|222441572|gb|ABXX02000001.1| GENE 147 163767 - 164693 1403 308 aa, chain - ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 8 308 16 308 308 256 50.0 3e-68 MSDSVIMFIGQIFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYALMLTIPF IIACGLPAWFAVIPAVLVCVAVGIIVERAAYKPVREKGNNMTALITAIAMSLLLENGSQA LFGADYQTVPTIVEIPTLVLGKLKIDGATIITVLLGIAIMVALQLFVSLTKQGKAMRAVS EDKEASILMGINVNSTITLTFAIGSGLAAVAALMYCISYPQVSPMMGAMLGLKAFVAAVL GGIGSIPGAMVGGLLIGVAESLTKAYIGTITAGVITSAFSDAIVFGILIIVLLVKPSGLM GEPESEKV >gi|222441572|gb|ABXX02000001.1| GENE 148 164760 - 165956 1502 398 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 14 394 6 381 383 238 39.0 2e-62 MKIKNAEKLAALCLAAVMGVSVTACSGGNMYATSNESATIADNDVITIGSVTTNSGAAAA YGEAEVNGFKLAVKEINADGGIFGKQIKLESMDDKGDVIEASNAFNRLAGDKNVIAVLGP TISSTSGAVAPLADQNQMPTIAPAATADSVETGGYLFRTCFKDSYQGEIAAKYAAETLKV KKVAVLYGTGDPYSSGVGKAFVAAAKKNGLDVVAEENSSSADDTEYSSQLQKIEASGAEF LYAPYYYSTVGPYIVPQARAVGYEGYIMGPDGYDGLKTTGNKANYNKVLYTTHYSPDDKS NTKVQQFITSYKKANNGESPNTFTALGYDSVYMFKRAIEQAGENATRADIRNAIAGMSFS GVTGAFTLDKHGSPKKSVIVLEMSDGEPTYKDTIQPAK >gi|222441572|gb|ABXX02000001.1| GENE 149 166135 - 167058 286 307 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 1 306 12 290 294 114 30 6e-24 MATVFELVRSASAMLRASGVDTPEHDAKLLAAEVFGVDLQTVDKAMLMGSETSELAKQGA KQSGEDAALKRFHTMVDRRSKREPLQHITGHAPFRYLDLKVGPGVFIPRQETELVVQEGV DWITKHGMYSAKVVDLCAGSGAIGLSFVTEVPGSEVWAVEKSEQTAQWTRVNLNETAKKY PSIASNYHLEIADATQTPTLNQLDGTIDIVLTNPPYVPLADIPQQPEVRDYDPDLALYGG SADGTLIPERIIARAAKLLKNGGLLVMEHDITQGERLSAFALSYGFSNVMVHNDYTGRPR YMTAKKQ >gi|222441572|gb|ABXX02000001.1| GENE 150 167068 - 168156 1276 362 aa, chain - ## HITS:1 COG:ML1134 KEGG:ns NR:ns ## COG: ML1134 COG0216 # Protein_GI_number: 15827565 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Mycobacterium leprae # 13 358 12 358 361 346 54.0 4e-95 MADEQFPAAVTALEEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKD DLEAAKEMASEDPDFAEEAKRLESELPAVEEKLRTALIPRDPDDARDTIMEIKAGTGGEE AALFAGDLLRMYMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLK YEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQ SVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEEEAAQAADMRH SQVRSLDRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLAH QK >gi|222441572|gb|ABXX02000001.1| GENE 151 168401 - 168613 382 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025458|ref|YP_909303.1| 50S ribosomal protein L31 [Bifidobacterium adolescentis ATCC 15703] # 1 70 1 70 70 151 97 4e-35 MKQGIHPDYHAVQVTCSCGNTFVTRSTYSGDHMTVDVCSSCHPFYTGKQKILDTGGRVAR FEKRYGKKAK >gi|222441572|gb|ABXX02000001.1| GENE 152 168659 - 168784 99 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEREPDNLAEYIRSLDFVKEWGVTGLNRGPADYESDALTD >gi|222441572|gb|ABXX02000001.1| GENE 153 168847 - 170073 210 408 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 150 395 67 319 319 85 26 4e-15 MASLRSINQDDLRNHNLSVVLDSLLRATEPMSRADLAKKTGLTKAAMSVLVSLMLDNEIL VEGAPSGQSLYGRPSIPLEIKGGRLCGMGLQANTDGYGVVVLDLDGSVVGEQWVDADMAN ADERAIFARLDELALQQEEALAKKGYVLAGTGLALPGLVTDDMRLLGARNLGWERLDLKQ FDVVKRLDPVACNEANAAALAQVPGYATQRKDSGRIKPTDSFLYMSTDVGIGGAVIREGR VVSGDHGFGGELGHVSVDMRGPVCRCGRRGCLEVYAGRRSMVSAAGIASSDAAATRSAID ELIDRWHQRDAQTVAVVEKALEAMASVIASTINVCDVDVVMLGGLWARFEPELIRRIERM VRPQVLAYPEVEASVLVADIVDRPALMGAAEIGLRRFIDNPLRFMKQN >gi|222441572|gb|ABXX02000001.1| GENE 154 170243 - 171763 1774 506 aa, chain + ## HITS:1 COG:Cgl0113 KEGG:ns NR:ns ## COG: Cgl0113 COG1070 # Protein_GI_number: 19551363 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Corynebacterium glutamicum # 5 506 3 454 460 357 44.0 2e-98 MTRTLVAGVDTSTQSCKVRVTDAETGEMVRFGQAKHPNGTSIDPKFWWDAFLEAAQQAGG LDDVEALAVGGQQHGMVILDQQGNVIRDAMLWNDISSAPQAAALIEKMGEAPAEEGEPED VIARGKQRWVKAVGSSPVASFTLTKVAWVAENEPENAKKIAAICLPHDWLSWRIAGYGPV AEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMVLEPAEGAEAAREHADAIMLPT VLGPHDAAAVKASPEIAGKNVEGGCIIAPGGGDNAMASLGLGMSVGDVSVSLGTSGVAAA ISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAALGVDYDELASLAFASEPG AGGITLVPYFDGERTPNRPDATATLSGMTLANTTRENMARAFVEGLLCSQRDCLELIRSL GAEISRILLIGGGAKSKAIRTLAPSVFGMDVTRPTTDEYVAIGAARQAAWVLSGETEPPA WPLTIDGVETGEPTEAVYEAYAKARG >gi|222441572|gb|ABXX02000001.1| GENE 155 171961 - 172638 680 225 aa, chain - ## HITS:1 COG:L1734467 KEGG:ns NR:ns ## COG: L1734467 COG0110 # Protein_GI_number: 15673662 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Lactococcus lactis # 30 215 5 189 203 140 39.0 2e-33 MSVHYSVVEIVTKETGMTKETETQIASDEDLTRLFAGKPTQYRKSKSLPKFTGEAMRTCA TINRIFFDDPDEAYRLFHELVPDAGEGVQFTPPFNVDYGIGLTIGRGTFLNKDFMVCGGG YVTLGEDCLIGPRCTIATPNHALDAATRLAGWEHASPVTIGDNVWFGANVTVTPGVTIGS NSIIGAGSVVTRDIPANSIAVGNPAHVIREIPERDPAFADVEGIV >gi|222441572|gb|ABXX02000001.1| GENE 156 172933 - 174921 1220 662 aa, chain - ## HITS:1 COG:no KEGG:BAD_0429 NR:ns ## KEGG: BAD_0429 # Name: not_defined # Def: putative secreted protein # Organism: B.adolescentis # Pathway: not_defined # 1 643 4 646 659 1232 92.0 0 MGNEERTSMVLQLPKLLDDGCVLQAGATIHIWGAGDPGRGVLVRLDGKDRTTRVGDDGSW SVPYGPIKAGGPYDLTVRYEDGTECISRQCYAGEVFLCSGQSNMELPMAWVRADYPLEWD REPDPLLRQYKAIPDCDFNGPRSDHDHAFWQGCDAETLGDFSALAYFFGRRIRQWLNVPV GLLNVSLGGSPIESWMDADALRAFPEALADLEPYLGDGVASKKSRDSVAERDRWYQALGY EAVADAHHEWLPLIAWDCPESKNIEPRDVAWHDIRLPGWYKDRGLAGFRGEITMRKTVFL PPSDAGKPALLRLGTMNDADHTWVNGVLVGGRSNVYEPRDYPVAAGVLRAGANEIRMRLV VERPGGRVTPGKRMTLTIGDDIFDLSGIWQYAVTAEADRDCPFEDFVRWKPTGLYNAMLA PCFPYAVRAVLWYQGESNTGDRAMQYGDELKAMIQLWRVKWHQPDMPFLIVQLPKFDIDA IEDGGWPLVREQEWNVANELENVATVVTLDAGEGNDLHPYDKKLVADRVFNAAMDLVYGR QAQPQPAVETIEVCGDLLRMHCVWRSRSDERIRSESRRLMTLDGDAPQEIEFLWRDCATS ARAEAWLDGCDIVVRMTARRPDEVRYAWSNNPESGLICDGDGMLIPPFRLTLPTDDDKGI HA >gi|222441572|gb|ABXX02000001.1| GENE 157 174984 - 176615 1681 543 aa, chain - ## HITS:1 COG:L0234 KEGG:ns NR:ns ## COG: L0234 COG3507 # Protein_GI_number: 15673487 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Lactococcus lactis # 3 541 4 541 559 793 71.0 0 MKISNPVLTGFHADPSMIRVGDTYYIANSTFEWFPGVRLHESKDLVHWNILPSPLSRSSQ LDMRGNPSSGGIWAPDLSYADGRFWLIYTDVKVVNGAFKDCTNYLVTAEDIHGPWSEPIR INGVGFDASLFHDDDGRKYLVQQTWDFREYHHQFDGITLTEFDVDTMKLKPETARTIWDG TAVKITEGPHLYKKDGWYYLFAAEGGTVYEHQESVARSHTLDEYSFEVMPNGPFIGNFDT PDTYLQKQGHGALVDTPSGEWYYASLCGRPWRHDTEPAHGTRGWCTLGRETSIQKVEWDE DGWPRVIGGHGGQRYVDAPKDAIETLAPTTRDEHDEFDSGELGPNWNTLRVPFTDAMGTV GGGKLALRGQGSLCNLFDLSLVARRWQAFDFDAETKVRFDPKNYMQMAGLTNYYDDLCWS WAFITWDEKRHARVIEVAQNDFNQYTSFLKDDAIVVPEEAEAVWLRTKVRTEYYSYEYSF DGEHFTEIPVRLDAKILSDDYVNQRYGGFFTGAFVGLACVDLSGYDAQAEFDYFDYRELS DNQ >gi|222441572|gb|ABXX02000001.1| GENE 158 176692 - 177585 931 297 aa, chain - ## HITS:1 COG:AGl3158 KEGG:ns NR:ns ## COG: AGl3158 COG0395 # Protein_GI_number: 15891695 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 24 296 7 281 282 198 39.0 1e-50 MTAATIAGHSNKSEYSKKNGYRKSSKTPWGNPIVYFFSLVLVAICITPVLYIIFGGFRTN SQITNHPSGMPNPWIPDNYKTVVESDIFWTELKNSTIVGIATMVGVVVLSIMVSFVIARY KFRYAPLMYALFSAGLMFPMTVGITPLYLLIRNLGLANSLWGLILPQIAFGLPQTIIILV PFLQSIPNELEEACLLDGCSRLGFFWRMVIPLSMPGVATTGILTFVGSWNAYMLPLFVLS DASKYTLPLGVQMFSSEHSVDTAQVLAFTSLAMIPALICFTIFQKKIVGGLTGAVKG >gi|222441572|gb|ABXX02000001.1| GENE 159 177585 - 178628 1182 347 aa, chain - ## HITS:1 COG:SMc02472 KEGG:ns NR:ns ## COG: SMc02472 COG1175 # Protein_GI_number: 15966816 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Sinorhizobium meliloti # 44 312 48 312 312 178 37.0 1e-44 MSSTSKDAVTLRAKRSKKPSDGKMRRNVEIFVLSAPAILLFVCFVILPIVLGAYYGFYQW KGYGLPSKTGKFVGLQNYITALKDPAFQAAILHTFEVVIGSLVIQAPLAILFALLLNQKF KGRGLIRTLIFVPYVVSEVIVGTGWSLLLQKKGAINEILANFGINGPDWLADPKIAIWTL LLLISWKYVGFAVILMLAGMQSIPDELYEAAKVDGASFWQMQKSITLPLLAPTLRIWVFL SMIGSLQLFDLVYIVWGKYVSTTAGVSTMATYMVREGRGAGNYGYGSAVALIIFVISLII ALVYQKFVLNRDLDGAVTEQKEAEKRARKRAKEVQHREVAALASEVK >gi|222441572|gb|ABXX02000001.1| GENE 160 178729 - 180003 1763 424 aa, chain - ## HITS:1 COG:SMc02471 KEGG:ns NR:ns ## COG: SMc02471 COG1653 # Protein_GI_number: 15966817 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 12 420 17 430 434 177 30.0 3e-44 MKFKTIAAATLAVATMLGMGACGSSAGAKDDKTITFWHNATAGDGKQYWEDLAKAFEKKT GVKVQIQAIQNEDFEGKLTTAMQDPASGPDVYMTLGGAKTKDMVDAGQVMDITDKISDTV KKQMSSSLDSMSYDGKVYGVPVAAQPGGIWYSKDLFKQAGIDAEPTTFSELKTDVQKLRS AGIDPIALGGKDAWPVGHWYYWLSMRECSPKAYAKGVNDKDFSDSCWVKAGDDLKDLLDA NAFNEGFLTTTAQQGASSSAGLLANHKAAMELMGTWEPGVLKDLTPDKKPMADLGFFAFP TVDGGKGEEGALMGAVTGFAVNPEAPDAAVDFVNFMAEKSNQEKYATAFSTIPASAEAYD AVTDENLKAILEAMKKSDGMQLWMDTALGGNIGNALNSGVVNLLSGQGTSADIVKAMKDA ASKG >gi|222441572|gb|ABXX02000001.1| GENE 161 180363 - 181379 986 338 aa, chain + ## HITS:1 COG:VCA0132 KEGG:ns NR:ns ## COG: VCA0132 COG1609 # Protein_GI_number: 15600903 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 12 336 4 333 334 184 36.0 2e-46 MRNTTKKATVRLSDIAKETGYSLSTVSKALNGRADVSEETRQTINAVLKRYGYSRKATGA KSQRIIEIVFQDFDNVWALEVLRGAIREAKLHDLNVITTEGGNRQHPDSSWIDNMLRRQT DGAILVFSSLTRIERNKLHSRGIPFVLFDPFGNPDPDTLSVQADNWTGGVIATRHLLALG HTRIGIITGPEEMMCSKARLDGYTSALAEHGIEADPELITEGDFTTSGGYAQSISLLKRP NRPTAIFAGSDLQAMGVYEAARQLGLRIPEDLSVVGFDDVQTAAFLGPALTTVRQPLQDM ARAAVRMLVEALSTDVIQPHIIMPTSLVVRNSTQQLEG >gi|222441572|gb|ABXX02000001.1| GENE 162 181512 - 183206 1005 564 aa, chain - ## HITS:1 COG:CC2802 KEGG:ns NR:ns ## COG: CC2802 COG3507 # Protein_GI_number: 16127034 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Caulobacter vibrioides # 9 564 37 543 548 123 26.0 8e-28 MTATITITNPILRGMNPDPSWIWDDEFQRIVLVTSTFELVPGLPIYVSEDMTCWKHVSNV VDADLARRLLIPFVDDSGGVYAPTLRRIHGKYVIACTIARLDDRRAMEGGCTESELMRFH AAEGNFILEAESIEGPWHGPFWIEGAEGIDPDIFEDGDGNVYWTQTRPAVNPQWEGQTEV WTQRINPETWTFVDDGLPAGSGKTVIWRGYGMESVWAEAPHLYRVGDYVYLMTAEGGTSF EHSEMAMRIYAPHGLLRAFEAYEREVSELGECIPQVRDGERCYLGAAIRAFHADKKNPIL THRHLGLSEPLQCVGHADLLLHPKLGWWLVCLGVRETRGKRDGELLSYLGRESFVAPVSW EHNPADWKLDGNGAPYTHEGDPGWPVTCAGLGRLADEITVTTEDDGIAIEPRVKSSLAGD VEPALVDVADGSTNDVVVRDERDVSYRRIAKLPTLMPIPMSGSLVIRQNSTHYAVFSMHG TDVRYEMVNGDDSQAGSVVVQADGVRPAVLFDDNRLSVIVTGMHGLVDSATFVRQGQVLL SVDARFLSTEWAGGFVGCMAGFMA >gi|222441572|gb|ABXX02000001.1| GENE 163 183187 - 183435 69 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVIVAVINTPYSETFVSIASLRTIETFVWPKNANKPYTGDITGRRLACEGNSRKKEGKMS GVPERRRFGTPHPALSQPSLTA >gi|222441572|gb|ABXX02000001.1| GENE 164 183480 - 184826 1888 448 aa, chain - ## HITS:1 COG:BH2757 KEGG:ns NR:ns ## COG: BH2757 COG2115 # Protein_GI_number: 15615320 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Bacillus halodurans # 5 442 6 435 440 484 56.0 1e-136 MGLWDIEKIPYVGREKGPQEGLAFHYYDADKVVAGKKMKDWLRFGVAWWHTFDQELVDPF GTGTAQRPWYGKYSNAEDEALAKVDYAFEFFQKLGVEYFCFHDRDIAPEGDTLRETDKNL DKVVDKIEENMKSTGIKLLWNTSSLFTNPRFVSGASTSPFADIYAYAGGQLKHSLEIAKR LGAENYVFWGGREGYENLWNTQMKREQAHMAKFFHMCHEYAQEIGLDAQFLIEPKAKEPT MHQYDFDASTAIAFLKTYDIDFMKLNLEGNHANLAGHTYQHEIRTAREAGVLGSLDANQG DKLIGWDMDEFPTDLYETSTVMWEVLAEGQIGPHGGLNFDAKPRRTSFAAEDLFRSHIAG MDAFAAGLLVAAKMHEDKVIENLQAERYSSFDSGIGATVENGTASLASLEEYALDIPQSK LIEATKSDHLESVKATINNYMIDALAEA >gi|222441572|gb|ABXX02000001.1| GENE 165 185044 - 186324 1360 426 aa, chain + ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 7 424 5 420 422 468 51.0 1e-131 MSENVDTTCVQGGYQPGNGESRTPPIIQATTFKYKSSEQMSRLFDLSESGYFYTRLQNPT NDTIAAKICEMEGGAAAMLTSSGQAANFFALFNICNNGDHIVASSAIYGGTFNLINVTMR KMGIECTFVSPDCTEEELEAAFQPNTKAVFGESISNPALIVLDFEKFANAAHRHGVPLIV DNTFPTPVNCKPFQYGVDIVTHATTKYMDGHGSCVGGAIVDSGNFDWMAQADKFPGLTTP DDSYHGVTYAKDFGKGAFITKATAQLMRDFGSTPAPMNSWIMGMHLESLAVRMERHCANA LKVAQWLSADPRVSWVQFPDLPGDKYYETARKYMPNGTCGVISFGVSGGRDKVSALLDHF RMISIATHVADARSCALYPAGTTHRQLTEEQLEEAGVGIDLVRLSCGIENADDIIADLKQ AMDAVL >gi|222441572|gb|ABXX02000001.1| GENE 166 186539 - 188008 1234 489 aa, chain + ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 14 449 10 402 563 145 29.0 2e-34 MDNDDYTAKMTELIELLRVIGNDTQQCEVKECKRRISSTITETLSAFSNGNGGYIILGLS EKAGFTPVEGFDARAMQEALSQACEKLTPVVRPVIVTCPFEGANLVFAVIDEMLPREKPC FVSSVGPHGGSYIRTGDGDRKMTAYEVDRLLDEQRQPEHDIAVVPEATLDDLNPTLVHAL LECERDRHPHVFAERSDMDMMLDLRILRRMPTGHPADDTVKHAADCDPAGTASREDDTDI GADTDTDEETRIASVPRPTLAGLLAVGRYPQKFFPRLNVTIAVYPGTSRDDVFTGDARLV ASETITGPIPIMIDDAVASLMAWTSGPGGADSGAQPSQSPQPPMYPQLVLREAIANALTH RDYSPDALGTPVHVDVFTDRIEVSNLGGLFGAVSKQRLTHEASTSTRNAFLFSLLRSTPY PDGGTVLRDDGTGYLRIGAALRNEAREPVRIDNSLDRFRVTIPGPVATGRSGVNARCGTR PAPGCGAGR >gi|222441572|gb|ABXX02000001.1| GENE 167 187956 - 188618 872 220 aa, chain - ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 6 206 8 207 227 133 40.0 3e-31 MNNMPQRLVFFALGVVINSFGVALITLGNLGTSAISSVPYVCSLQFPMFSFGVTTFIWNI LLILVQVVLLRRDFNPSQFLQIMVNVLFSAMIDVSMAILGVLHPTMLWGQFLCIGLGCVA LAFGIVIELAPNVVVVPGEGVVRAIAKVSGVRVGTVKAVFDITLIIIAAVLSLIFFHGLR GVGIGTVISAVLVGPIINIVNRVFTFQHRIQALALSRNGR >gi|222441572|gb|ABXX02000001.1| GENE 168 188932 - 189672 490 246 aa, chain + ## HITS:1 COG:Cgl1047 KEGG:ns NR:ns ## COG: Cgl1047 COG3238 # Protein_GI_number: 19552297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 184 1 194 307 112 37.0 9e-25 MLLAALGVLTGIVTPLQTVVNARLRGTLGTPFRASLVSFTVGLAATTIAALLLGPYPLVP ESALHGPWWMWFAGLFGVIFMTGNILLLPRLGSLQTVLMPVLGQITMGLLIDQFGWLGNP RHPMTMARAAGLVLAVLGVLLAVAAADAKTLFGGPNPFGSRHGAARTPRNAVRGHVATPC GRPLHEPNPLAKHLAMAWTGHTLRHVVGGASRHAGTTGYGARIADQGVGRLVHPGICAAV RRGRVP >gi|222441572|gb|ABXX02000001.1| GENE 169 189545 - 189853 313 102 aa, chain + ## HITS:1 COG:Cgl1047 KEGG:ns NR:ns ## COG: Cgl1047 COG3238 # Protein_GI_number: 19552297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 92 174 265 307 57 42.0 5e-09 MSLAVQAAMLGRLGTALGSPIKASVVSFILGFVLLCAVVVFRDHGLDLGKTIRGHNPPWM WIGGLLGAVVVLMTSWLSPQLGTGLTVLVVLVVLIGQVTGGL >gi|222441572|gb|ABXX02000001.1| GENE 170 189990 - 190412 482 140 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 6 130 75 199 201 81 39.0 5e-16 MAVIILRKPGAAVYVNLVGSAAEMLLGNQFSFGFASAALQGVFAELPFALTRYRVFNLPI SMTSGALVALEYGVYLMLFRYQGVSFLSPRGVIHMISELVGGVLIAGVMSWYLYRAIAAT GALDRFASGRARRDDADRRG >gi|222441572|gb|ABXX02000001.1| GENE 171 190131 - 190703 120 190 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDDAAGAEERYALIPEQHQVHAVFQGHQGAGRHGDRQVEHAVPGECERQFGEHALQRRGR EPERELVAQQHLGRAAHQVHIDRGSGLTQDDDGQRAGEIPQRVQDAGQSGQDAADDRGQS CVGEVEQPEHQSAGHAQRGAHGDVVPILQRQRRSAARPPEDGDDNPAGPEASLRADMSAM SDVFPTAGMV >gi|222441572|gb|ABXX02000001.1| GENE 172 190913 - 192139 201 408 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 150 395 67 319 319 82 28 4e-14 MTTLRRINQDDLRNHNLSVVISTLLRAAEPMSRAELAKQTGLTKATMSLLVSMLVDNGVV REGTPSVQSSYGRPSTPLLIVGGRYCGIGLQVNTDGYGTIVLDLDGTVVAERWVDADMSD VDADDIFSELNALSLEQERLLADRGYTVTGTGLALPGLVTDDMRLLMARNLGWEQLDLKR FDVVRRLDATAGNEANMAALAQIPGYAMHREDDGIVEPNASFIYLSTDVGIGGAVVRGGH VEIGDHGFGGELGHVSVELRGPVCRCGRRGCLETYAGRRAMVESAGIASGSAAARRESIN ELIERWRDGDVKAAAVVDKAIEAMVSAIASAINICDVDTVMLGGVWSQFGPEIASHMQGM MRRQVLGYPEVRAKVLMADVTSKPALIGSAAIGLRRFIDNPMRFVSTD >gi|222441572|gb|ABXX02000001.1| GENE 173 192322 - 193851 1736 509 aa, chain + ## HITS:1 COG:Cgl0113 KEGG:ns NR:ns ## COG: Cgl0113 COG1070 # Protein_GI_number: 19551363 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Corynebacterium glutamicum # 5 509 3 454 460 346 44.0 6e-95 MSRVLVAGVDTSTQSTKVRVTDAETGEMVRFGQAKHPDGTSVNPDAWWQAFQEAAEQAGG LDDVAALAVGGQQHGMVLLDDHGRVIRDALLWNDTRSATNADVLIACLGEAEKAADGSED DLSDDPAMRGRQRWVKAVGSSLVASLTITKVAWVAANEPENAARIAAICLPHDWLSWRIA GHGPLGEDATAEEMKANLDALFTDRSDASGTAYFDATANEYRRDLLAMALGRGEEDIAGI VLPRVLGPTETGDVADPAIAGKDVEGGCPIGPGGGDNAMASLGLSMGVGDVSISLGTSGV AAAISPVPAYDMTASVTGFADCTGHWLPLACTINGSRISDAGRAALGVDYDELAELAAAA EPGAGGITLVPHFDGERTPNRPDATAALYGMTLANTRRENIARAFVEGLLCSQRDCLELV KGLGVDVKRILLIGGGTKFAAVRALAPAILGMDVELPETDEYVAIGAARQAAWVLSGETE PPTWPVKVETTLTGEPTPQVYEQYVRWRG >gi|222441572|gb|ABXX02000001.1| GENE 174 193930 - 194826 848 298 aa, chain + ## HITS:1 COG:no KEGG:bpr_I0724 NR:ns ## KEGG: bpr_I0724 # Name: not_defined # Def: inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1) # Organism: B.proteoclasticus # Pathway: not_defined # 1 297 1 294 294 315 52.0 1e-84 MTFHFTVRDDKQIRVIIDTDADCEADDPFAIAQALLTPKFMVKAICAEHFNEAGSMERSF RTASTVVQLLNSDVPVLEGARTPLAGLHLASDEDLSPASRAILDEALSADTHPLFVLCLG AITNVAAAIKLHPEIVSRMTIIWIGTQLPGNDEEAIREFNSGNDVEGANLVLTSGANLWL VPYQVYRTMNVSIAELQCKLADAGAIGEFLFDNLVKYNDSDFAFWTSGESWSLGDSPAVG LAMKHDCGEFHYAPAPLVKPDSSTAFIPSRPTIRIYDSIDSRFILEDLFAKLTLFARG >gi|222441572|gb|ABXX02000001.1| GENE 175 195406 - 196509 1183 367 aa, chain - ## HITS:1 COG:BH3344 KEGG:ns NR:ns ## COG: BH3344 COG1979 # Protein_GI_number: 15615906 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Bacillus halodurans # 1 358 33 383 387 287 43.0 2e-77 MLLVYGGGSIKRNGAYDDVTAALREAGNEVIELSGVTPNPRLDKVFEGVNLVREHGVNLI LAVGGGSVIDCAKFISLGSGLGEDEDLWYDYVETGKPAPENLVPLGVVLTTAVTGSEMGG VAVLTNWARNRKLGYTSFPLTPKFSVLDPTYLLTLPAEQTTYGFVDMFCHTCEQYFSLPS DDNLSDEMAEAIQRHILRSWRACRRHPRSYEARSNAMWDSTFALNRVISRGKEEDWVTHG IEHALSAYFDISHGAGLAVVHPHWMKYVYTSRPEATARFARWAVNVWGVDSTGKSEREVA EEGIEHYVDFLRLVGAPLTLSEVGIPADPATLDKLADHAGDVGGSYRRITRDDARAILAL CVTPVVF >gi|222441572|gb|ABXX02000001.1| GENE 176 196809 - 198677 970 622 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1600 NR:ns ## KEGG: BLJ_1600 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 5 617 2 645 657 577 46.0 1e-163 MKSTLHINPLFGEGCVLQSGMPVRIWGGGRPGSTIEVSVAERRADAIVDADGAWTVTLEP LDAGGPYRMTVSETSEAATRESLSHDVYAGEVFICAGQSNMEYQMEFLHWRYPSEFTREA DSLLRHCKVPVRFDFHGPRHEFDEPVQWVGAASDTLDEFTGIGYFFGRMIRESFGVPVGL LNITLGGSPIESWMDEETLAAWPRMLTDLAPYRNDDEARVRNESSIEARTRWHEDLRVRE VNRWNEDAETGTVNLPAFLSDADPRLAGFRGVIRLRRTVMLPTYAVGRPAVLHLGAMVDS DITYVNGVEVGRSEHQYFSRDYVVPENVLKAGPNDVEVRLVCERGTGRFTPGKRMHLDVG DDSFDLSGAWRYMIGAEIDEDCPTEDSLQWKPLGLYNGMTATCAGYGARAVLWYQGESNT GDVADEYGHMLTAMIGCWRHAWDQERLPFLIVQLPVFSIDNVEDGGWALVRQHEWQVSKT VDDGATVVALDAGEWNDLHPWNKRVVAERLFHAACGLVYGKNDAPKSPEPKSAVLTDGEL VIDFAGGPLYTLDGDEPREFELVWEDGSVHAVSGRVEGDKVVIRVPWRKPTSIRYAWSNA PGRGLLCSGKGMPVPPFAMPIE >gi|222441572|gb|ABXX02000001.1| GENE 177 198706 - 199839 1490 377 aa, chain - ## HITS:1 COG:BH2105 KEGG:ns NR:ns ## COG: BH2105 COG3405 # Protein_GI_number: 15614668 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Bacillus halodurans # 12 377 16 379 388 405 56.0 1e-113 MGAGAMGHMETSMFEQCGYGREAIQARLERNWTEMFEGPDKIYWENDEGLGYVMDTGNHD VRTEGMSYAMMIAVQYDRKDVFDKLWGWVMKYMFMTEGLHKGYFAWSVDLSGVPNADGPA PDGEEYFAMALFLASGRWGDGEGVYEYSRHARSILHTCVHRGEDGEGYPMWNPENHLIKF IPETEWTDPSYHLPHFYEVFAQRADEADRPFWREAAAASRRYLVTACHPETGMNPEYSNY DGTPHVDERDHWHFYSDAYRTAGNIGLDCLWNGVVPELCDANARLQRFFLEHDRTCVYAV DGTPVDETVLHPVGFIAATAEGSLAAMHSQEPDALDNAIRWVRLLWDTPIRTGTRRYYDN FLYAFAFLALAGEYRVW >gi|222441572|gb|ABXX02000001.1| GENE 178 199844 - 201931 612 695 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225350918|ref|ZP_03741941.1| ## NR: gi|225350918|ref|ZP_03741941.1| hypothetical protein BIFPSEUDO_02493 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02493 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 695 39 733 733 1448 100.0 0 MALECSARRADGAGRYVRLDECGLAVEVDWHGGNGSPADPWRCTVTVRNDGSVAFEGVVR IDIPIRADGEPRFFLPGFMYGRNRGEAPLRTATKFPRLRERSELPASSWWMIRGDRLSNP CALAVTRSRVVGVVSSPYLVDRGDGMLVGHEACDELPFVQYAGFSCMLPTPGIVPCDDHA SVGVTIGYENAPWLFVSSTDIRERPDSAEGPITLAPGGAAIMRLDVVDAPARDERAIIPV LETVYRRFHEPPRQVGAPARAIRDIAVAVDRDAWLEDEHMYAGFVFDHHSPGDEIIEGKP YMYRRLGSSSWTNGMASAVPMLASAWRLGDDAMRRHALDGIEHIIQHCINPTNGLPYTAV EHERWSNRGWWFDGLSNPGHSGYLVGQTMYSALRAWQIERRFGGIDHSDWLKIIGNVIPR LAAGRNAVGEYPFVFDEMDGSGAEYESFGGVWCLAASAYWALLTGDHSDLDGMLLSERHY HNRYVAHMECYGAPLDTSKAVDSEGILGYIKAVGCLYAITGDAMYLDRMREAFAYECSFR FCWNSPVGVPPLNEVGWSSCGGSVTSTSNAHIHPMSSVAIEDMVYYLRYRNDTYIASRLC DAVGWSCQTYNLKDGEYGYGRVGWMSERFCHCQGFLDERYPDGSLCSTWRCLMPWAAGAI LDGLTGLYWDVMPHDELPTVTMVSRAMGCVHDEKG >gi|222441572|gb|ABXX02000001.1| GENE 179 202065 - 203696 1623 543 aa, chain - ## HITS:1 COG:L0234 KEGG:ns NR:ns ## COG: L0234 COG3507 # Protein_GI_number: 15673487 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Lactococcus lactis # 3 538 4 539 559 799 70.0 0 MKITNPVLTGFHADPSMIRVRDTYYIANSTFEWFPGIRLHESKDMVHWNTLPYPLGAEQL DMRGDPASGGVWAPDLSYADGRFWIVYSDVHIVNGAFKDVVNYLTTAEDIRGPWSKPLRL NGVGFDASLFHDDDGRKYLVQQTWDHREYKHQFHGITLTEFDTATMRLKPETARTIWMGD DVKLVEGPHLYKINGWYYLFCAEGGTVWTHQESVARSRTLDELSFEASPTNPFITNFDIP GSYLQKQGHGALVDTPSGEWYYASLCGRPWHHETESFTDPRGWCTLGRETSIQKVEWAED GWPYIVGGHGGERYVEAPKDAIETVAPASRDQHDEFDADVLGLDWNTLRVPFDEKMGSVG GGSLKLIGQGSLCNTFDLSLVARRWQAFDFDAETCVAFDPKTYQAMAGLTNYYNDQHWSW AFVTYDEDRKCRVIEVAQNDRNNYTSFLRENAVVVPEGVDRVWLRAKVRTQWYAYEYSFD GETWTELPVRLDARILSDDYVNQTYGGFFTGAFVGLAAVDYSGYGEVATFDHFDYREISG MED >gi|222441572|gb|ABXX02000001.1| GENE 180 203701 - 205695 1389 664 aa, chain - ## HITS:1 COG:no KEGG:BAD_0299 NR:ns ## KEGG: BAD_0299 # Name: not_defined # Def: putative outer membrane protein # Organism: B.adolescentis # Pathway: not_defined # 2 645 4 676 680 707 53.0 0 MQYHVSPEGSDTAQGGPDNPFRTIGHAAQVAMPGDIVIVHDGVYREWVDPRRGGTCEADR IVYRAADGEKPVIKGSEIICGWSRYKDDVWRVTLDDAMFGDYNPYRQPLFGDWLAMPSRG EDPDKHPGMVFLNGRALYEVTSLEDTFAPRYRDHVKDYVTDVACAIDDPEMTQCVWYARV EDDRTVLYANFHGADPNEECVEIAVRRSCFFPRRHHVNYITVSGFELCQAATQWAPPTSH QVGAIGPNWATGWIIERNLVHDVKCSGISLGTSEETGDNEWYRTERKTGHQYQLEAVFKG LRIGWKKGFVGSHIVRDNVIHDCGQNAIVGHMGGAFSTIEHNHIYRIGARREFFGWEVAG IKLHAALDARILDNCVHDCSLGMWLDWQAQGVRISRNVFYDNACDLEIEVTHGPCLIDNN AFCSAMTYDNYAQGTAFVNNLIGGTISNNSVLDRFTPYHYPHSTEVAGNAFVYGGDDRYA SNIFLDGAGTFGSTGLSAYRGYPSTMAEYLQSVHDIFASGVTNGHDPQPVQMLYSWDNAY VGEAEGPEGEQGTTHVASPVNVRCEFKGDDLYLLFDCPTELADKKAAVVGTADLGVPRIV DERYEETDGSDIVIDTDIVGRRRAELSSVGPFAELHPGSNRQLAWCGAVRTTHDACPSCG VKEW >gi|222441572|gb|ABXX02000001.1| GENE 181 205809 - 206675 944 288 aa, chain - ## HITS:1 COG:BH3682 KEGG:ns NR:ns ## COG: BH3682 COG0395 # Protein_GI_number: 15616244 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 47 282 50 286 293 122 31.0 1e-27 MATKHETGAVKIPKRRSLERPNWAAGVLSTLWLLVVVVPLYIMVKASIEDKPHYSEEGPL SLPTMFTLDNYTNALDQGFLQAFINTAIVTVSVVAIVLIVVPPLAFAIVRSRSKFVNGVF QIMLLGIAIPVQAIIVPLFFMIRSVGLYDNLISVIVASAAFSIPMCTIVLTASMRQITNE LYEAMSVDGASVVRIFFQLTLPMSKSGLATVIIYSAMGAWNNFMFPLILTQSDSNRVLTL NLYQYQSQFGIDIPGMMAAVILSVLPILVVYFIGRRSLVDGMMGMGGK >gi|222441572|gb|ABXX02000001.1| GENE 182 206675 - 207628 883 317 aa, chain - ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 36 303 11 284 292 144 31.0 2e-34 MAKRNSSEMQTGNAEGQVRRPKKGASFVGGARPSGLWAVPAAVFFFIFGILPLFIVVGLS FFKWNGLGTPQFAGGQYWAQFIHDPKVMKSVGVTLTLTILGIVTQTPLSLLLGAWAAGRQ RYRAVYTAIYFIPYLLSGTAIAVAWRAMLDPNFGMPSKMRWLFGDGNIFGNASSAIAVLV FVSLWQFTPFHALLYQGAVRAIPKTLYEAASIDGAGRIRQFFCITIPQVRNTLITSLLFQ VVGGLTAFDAILVLTKGGPGTDTQNTAYYMYSTAFKAYNYGYSSVIAVVLIVIATILSLV MVKVSGYDKMRSELEGI >gi|222441572|gb|ABXX02000001.1| GENE 183 207648 - 208955 1662 435 aa, chain - ## HITS:1 COG:BH3680 KEGG:ns NR:ns ## COG: BH3680 COG1653 # Protein_GI_number: 15616242 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 367 1 375 438 127 26.0 3e-29 MKMKRFVAAAIAAVSCLSFAACGSDTASKDENVIHIMSSGDSSANMERALVDEYNKTADV KAVLDLVTSADYQNKLQTVMSNPKSDSAPDIFFNWADALMIQYARADVSAPLDEYMEKDP ELKDNFLPSILDAAKVDGKYYGIPVRGVQPIVLFYNKKVLSDNGIEAPTTFDEFCDACEK LKSAGLTPIALGGGDQWPTLNWYSVIYQQVMGNDDVQKMMDGGVDEWSSPKSKKALEIIR DMVEKGYFGTTYDSVKHTDGAAPALLEQGKAGFELMGSFGYSGHKAAAPEFTNDDLGYMV FPPIDGVKGDAKDLVGNPCNYFSMNKYTKHPEACVEFLKMLYSDKCVEDQLKAGNLPATT NASEMVEKVVDNASDGAFLEWESQALTDAPHFMITWTPNHVSSSSQPMLDGMQQYFNGSI DMGTFIDEMKALPTE >gi|222441572|gb|ABXX02000001.1| GENE 184 209187 - 210242 554 351 aa, chain - ## HITS:1 COG:SP0178_1 KEGG:ns NR:ns ## COG: SP0178_1 COG0117 # Protein_GI_number: 15900115 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Streptococcus pneumoniae TIGR4 # 201 342 5 143 143 162 52.0 1e-39 MIDLVLDDLRGETSECGMTLAELAIRIRDLNALEADRAALAFEGQTAFGGVVGAVFRSDR RVEHYEDAIAEILVHECNDALRDADHVCGHADAAVAVCIESVFEILRDGKILGRIERLRR RLAQKRNGRHDFALHVMFPLAGSFAGLPTLYGVIVRRRTAMGRMAGSRLSFYGMSRGDFE MWDRNRRNMLGTMDDMPQYRKYMTQALELAHKGAGWVNPNPLVGTVVVRDGEILAAGYHD RYRGPHAERMAFDYADEHGADMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSI DPNPIVAGKGLRILEENGVEVVYDVMRAECDAINRHFFHYITTGMGVRTKC >gi|222441572|gb|ABXX02000001.1| GENE 185 210413 - 211336 630 307 aa, chain + ## HITS:1 COG:lin1811 KEGG:ns NR:ns ## COG: lin1811 COG1680 # Protein_GI_number: 16800879 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Listeria innocua # 45 281 53 301 323 109 29.0 8e-24 MGAINMFNDFVKLIESESLPVEAVAIADGDAIIAERHFVPDQDRNIYSHTKSYVSTAIGI AIEDGLLSLDSRLVDSFPEYVPSDAQLELGQITLRHLLTMSSGFNHAYLMNPDRRSGVGA PDYLRYMFSRRVEAEPGSTFCYSSADSDLAGRMLEQAAGMRLGEYLYGMIFSKLDQGWPV WECDPQGHPIAGGGIYMSLANMLKLGQVYLNDGTWHGTRIVSESWVKQASGKQIDTPYSN IWTCGYGYQFWMSPYEEAYRADGAYGQITTVLPKQGLVVAIQCPESGDFDNIVRPALHEH LLLPLTA >gi|222441572|gb|ABXX02000001.1| GENE 186 211495 - 213171 2187 558 aa, chain + ## HITS:1 COG:MT2552 KEGG:ns NR:ns ## COG: MT2552 COG0488 # Protein_GI_number: 15842003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 558 1 557 558 801 72.0 0 MAEFIYQMIKARKAFGDRVILDDVTLSFLPGAKIGVVGPNGMGKSTLLKIMAGLDTVSNG EASLTPGYTVGILQQEPPLDDTKTVGENIKMAFGEIAEKVARFNQIGEEMANPDADFDAL MDEMGKLQNDIDAANGWDLDSQLEQAMDALQCPDPDTPVTVCSGGERRRVALCKLLLEAP DLLLLDEPTNHLDAESILWLEQFLHQYKGAVIAVTHDRYFMDNVAEWICEVDRGQLYPYK GNYTTYLETKAKRMEIQGAKDAKLAKRLKSELDWVRSSPKARQAKNKARLERYDQMEQEA RNNKKLDFSEIQIPAGPRLGSTVLEAEHIHKAFGDRVLIDDLSFTLPRNGIVGVIGPNGV GKSTLFKTIVGLEPLTSGSLKIGETVQISYVDQNRAGLDPNKNLWEAVSDGLDFIEVAGV EVPTRAYVASFGFKGSDQQKLTGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL ESLENALLGFPGCAVVISHDRWFLDRVATHILAWEGDDENPAKWYWFEGNFQAYQENRIA RLGEDAARPHRLHRKLTR >gi|222441572|gb|ABXX02000001.1| GENE 187 213604 - 214518 914 304 aa, chain + ## HITS:1 COG:BMEI0166 KEGG:ns NR:ns ## COG: BMEI0166 COG1946 # Protein_GI_number: 17986450 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Brucella melitensis # 41 301 43 299 300 174 37.0 2e-43 MTETAITPLQRLAKVLQLGTPSMYRNHMYVNGESLYFPTGRVYGGQVIAQAMMAASKTVS PSRLPNSIHGYFISAGDIRQDLLFDVENLRDGRSFSARRVNVTQAQGSILTAIASFQEQG QEGVEFADPMPEGVPEPEALTSAKQLMEPFAEKSSFAKYYAEKSPFDIRHVTRTIMLGAD KKSASNDSGKQMVWMKADGTVDVPQVMHRAMLAMGCDQVMLEPVLRRAGLSIATPGISFA SIDHSMWWYRDIDITQWHLYVQDTPTAAHGRGLGQAKVYTQDGELVACMTQEVMLRVPEE DLKK >gi|222441572|gb|ABXX02000001.1| GENE 188 214524 - 215075 415 183 aa, chain - ## HITS:1 COG:no KEGG:BDP_0553 NR:ns ## KEGG: BDP_0553 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 178 1 178 184 259 77.0 5e-68 MKARRTPWWCYVLAAALGLLAGIGLAKYGEISGFPLVGAPWIVPVVLAILGFVVLYMALQ IHKYTTTDPEKRAQLKPLDPQKAFATLVSCKALGVAGASLAGWYGGQLIMSLPHGEAAFY SQAILECAIAAIVCIIDMIIGIVGEWLCQIPPIDGPESPKMKTATQRNRYAAAATKSATQ SKV >gi|222441572|gb|ABXX02000001.1| GENE 189 215072 - 216595 1379 507 aa, chain - ## HITS:1 COG:NMA0958 KEGG:ns NR:ns ## COG: NMA0958 COG0801 # Protein_GI_number: 15793915 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Neisseria meningitidis Z2491 # 128 275 5 149 164 114 47.0 3e-25 MDQIRLTGVRAVGKHGVLDFEHERAQTFVVDATLFLDLAPAGYSDDLRDTVDYGAIAKGI VAIIEGEHVDLIEKLADRIASMILEYPAVAQTQVTVHKPSAPIVVPFDDVSVTVERSRET TSAASQVHHAIIAMGGNQGDVAATLRDAVRSIDGLASTQVTGVSPLYRTDAWGMPDGTPD FYNAVVSVTTKLSAMELLRGLQRIEVEHGRVRTDHWTSRTLDLDIIDFDGQSNDDPDLTL PHPRAWQRAFVLGPWLALEPDAELSGEHAGSVAQLLHEASDRDHIDEIADDWMVGSPTGY GIDDLACDANNAGDADDMDEAYGAIDSSDLPEGTAAAKAAALASAQLEPASKRAVISLDS PATDAEQQFRMAIVTLDGIPGNQVEGISPLYHVSQLDGLPDKMAAVIQISTRMGAHDLIE ALGNVEASIGEDLDLDLIDMEGVECDEPDCKVPWPTARNHAAVLAPWLDMDPDARLGKDP VSFLLAMAPDAAQVGLLTDNWIIGGTL >gi|222441572|gb|ABXX02000001.1| GENE 190 216691 - 217569 1009 292 aa, chain - ## HITS:1 COG:ML0224 KEGG:ns NR:ns ## COG: ML0224 COG0294 # Protein_GI_number: 15827021 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Mycobacterium leprae # 16 286 8 270 284 219 48.0 4e-57 MTIDMKAIHDSDRTLVMGVLNITEDSFSDGGLWLDPANAKAHGEAMMKDGADIIDIGAES TRPGAKRVSEEDEQTRVLGAVDTLIPEGTVLSIDTTRASVARMALEHGAQIINDVSGGRL DREVPHVVAEHSESLYIVQHWRGWLAGSAGDVPDADTSVYANGVVDDVYDELMKQVDDVL QAGVSPSQIIIDPGLGFSKPSVEHNFPLMTALERFNTTGYPVLIGASRKRFVGAALADAG IDKPNMDSKDNATAAISALCAEHGAWAVRVHDVKKSRDAVAIGNAWRAFAND >gi|222441572|gb|ABXX02000001.1| GENE 191 217633 - 218271 637 212 aa, chain - ## HITS:1 COG:ML0223 KEGG:ns NR:ns ## COG: ML0223 COG0302 # Protein_GI_number: 15827020 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Mycobacterium leprae # 26 210 19 205 205 219 57.0 3e-57 MSDTEAFDTLFDDKARAAHTAGPVGYDEEGVRQAVRLFLKSIGEDPDREGLLDTPDRIGR ACKELFAGLGHGPEEVLKTKFKVDTDEMVLVRDIELFSVCEHHLLPFHGVAHVGYIPSNG QVAGLSKLARLVELYARRPQVQERLTQQVADALMEGIEARGVIVVTECDHMCMAMRGVKK AQSRTVTSAVRGCMRDATTRAEAMSLILSQHS >gi|222441572|gb|ABXX02000001.1| GENE 192 218271 - 220373 1197 700 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 175 661 108 595 636 465 51 1e-129 MSFPGPGQSPNNNGGGNNPFTNPFGRNNNAGNGKDSNGNGDKSNGNGSNGGPRPFWQSPW LWVVVVALLAVTMFQIFAGTGSQTIDTKDGLQILNGNNVEYAQIVDNTQQVKLKLKSDYS ATNPDTGRMKNYGKNVQFYYTYAQSATVVKAVQKADPVKGWTATMQQSSIWTYLLTSLLP FLIIFGLFWFMMSRMGGAGGMFGMGGKKNSGKLLEGQTPTTKFADVAGEEAAVQEVEEIK DFLKDPSRYKALGARIPRGVLLYGPPGTGKTLLARAIAGEAGVPFYSMAGSDFVEMFVGL GASRVRDLFDEAKKNAPAIIFIDEIDAVGRKRGGSGMSGGHDEREQTLNQLLVEMDGFNN DTNLIIIAATNRPDVLDPALLRPGRFDRQVAVEAPDLEGREAILKVHAKGKPFVPDVDLH MIAVRTPGFTGADLANVLNEAALLCARAGAQLIDNRAIDEAIDRVQAGPKRRSKGMALDE LRNTAYHEGGHALVAAAMNDTDPVTKVTILPRGRALGYTAVMPTEDRYSMSRNQLLDQMA YAMGGRTAEEVVFHDPTTGASNDIEKATNIARQMVLDYGFSDKLGAIKWSDDEQSDLGSL NHKYSARTAEIIDEEVLKLVETAHTEAWNVINENREILDELVRQLLVKETLNEKELAEIF ANVKKAPKREVWLSDSKRPDSDIPPVPIPESLKKSAGLTN >gi|222441572|gb|ABXX02000001.1| GENE 193 220370 - 220942 495 190 aa, chain - ## HITS:1 COG:SP0012 KEGG:ns NR:ns ## COG: SP0012 COG0634 # Protein_GI_number: 15899961 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 9 185 2 178 180 172 50.0 3e-43 MVGMRIADVQEDIDHELISKEEIADIINHAAAQASEDYRGKNPLLVCVLKGAVNTLAAFS QAMSIQAEMDFMSLSSYGSGTQSSGKITVRQDLSTDVRGRHVLIVEDIIDSGVTLAWLVD ELKSRGAASVEIFALLEKPARRKVDVPVKYKGREIPDEFVVGFGLDYDERYRNLDSIAVL KPEVYEGGQA >gi|222441572|gb|ABXX02000001.1| GENE 194 220920 - 222014 296 364 aa, chain - ## HITS:1 COG:ML0213 KEGG:ns NR:ns ## COG: ML0213 COG0037 # Protein_GI_number: 15827015 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Mycobacterium leprae # 47 348 30 306 323 112 33.0 1e-24 MVYSSRLRKGVGELRAALKSAGFGLQDARFARHGEHTPDADAPLIMVACSGGRDSMALAA VAAKTCASLGLRCGTIIIDHQLQQGSAGVAQTTADRCVALGLDPVRVRAIDVPDSRGIGV EAAAREARYHAIVDACSDASAVLLAHTKNDQAETVIIGLLRSSGLDAVCGMNGSFIRDGV RFLRPWLNMTREETTGICEDLRLAWWDDPTNGPDVGNSGGNEPLPANYPLRSRIRHDLMP YLESFAGSDVVSKLALGARLAEDDRAYLDGVAQRVCEQGVTVNNGEIIIDARALQSQDIA IRRRVIVRSLAEAGISCMARQVEGIDRLICDWHGQKGVNLPSGYSAYRQKHVIRVCQDGG HANR >gi|222441572|gb|ABXX02000001.1| GENE 195 222019 - 223464 1275 481 aa, chain - ## HITS:1 COG:Rv3627c KEGG:ns NR:ns ## COG: Rv3627c COG2027 # Protein_GI_number: 15610763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Mycobacterium tuberculosis H37Rv # 118 459 107 437 461 87 30.0 4e-17 MDDSAEYRHVKRRRYITVALSVALTTVLCVGYVVADIFDKLPGVLTLQEVEHITAKTPGN AVPAATVIGGLDASKTVDAAAAKALISQFETAASDFGDEYAIAIADAAGNVVAEHALDKS YTPASTMKTLTAYAVATTLDMGETLDTQTYLEQREDGTSRLVLKGNGDMLLGAGASDSSH INGRAGLGTLAANTAQALRQRGITSVTLVYDDSLFGNDRWPSGIAELDSNHVYYAPTSSM AVDGGRNWNGADPADPDMFSTYPALSTQPAREAAQVFAQRLAEHGIAVNSSVEQGTVPEG TSPIAAVRSASLNEIMAFMLRHSDNSLAEEFGRLLALHLGADNSPTGAVRSVEQVLVQQG ISTEGLIMLNCSGLSEESKLTARTLLEVQQRNLTSGAGAAAAEGLSVVGFVGTAANRLND DNEAGLIRVKTGSLGDVTSMTGNVSRHNGGALSFAVIVNNPDDFEAAKSAIDTFVAALPK L >gi|222441572|gb|ABXX02000001.1| GENE 196 223545 - 224768 1393 407 aa, chain - ## HITS:1 COG:CAC1691 KEGG:ns NR:ns ## COG: CAC1691 COG1215 # Protein_GI_number: 15894968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 44 405 47 412 425 226 36.0 5e-59 MVLLSVLDILLVIVGGAGVVYQAVCILISLFTKPIKFPDAPMDKRYAVLISARNEANVIG NLITCIQTQTYPTELVDIWLVADNCTDNTAEVARNMGCHVIERFNKELVGKGYALTYLLD QMNDSGASDPYDAFFVFDADNKLDKHYVEEMNKAFQSGFKILTSYRNSVNLSDNWVSSGS ALWFIRESRFLSASRMWLGNSCHVGGTGFMFSREIMRRNNGWKFHLLTEDLEFTMDSLLH GDRIGYCGTAVLYDEQPVTFAQSWRQRLRWSKGFLQVFRYYGPALIKRAIRERDFSAVDF TLLLCPFTVIGIVRILLGLLFAACGFVTWQSQLSSLAGWTSGIVTSVIGMMALAALTIIV ERDQIGATNKELFAYVLSFPIYMFSYVPISFQAMFAKSEWKPIEHKG >gi|222441572|gb|ABXX02000001.1| GENE 197 224768 - 226306 1593 512 aa, chain - ## HITS:1 COG:Cgl2741 KEGG:ns NR:ns ## COG: Cgl2741 COG0628 # Protein_GI_number: 19553991 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 42 396 84 437 476 104 26.0 4e-22 MSDSEQRMNNTQSENGANTSEQRWDLGTLFPAKGDPRKPPEWLGRALLYIAIAIVGFTFC WRSWGKIEYLVIDIIVSLFIALAVEPVVVPLVKHGWKRSFASLFSLLMLAVMLGVLFTLF GNLFVQQMIALVNGLPDLYEQMCQFASQYANFQLPEINNLGNEILKNIQTSWVTDFAGTA LNTVSGLFSFLINLMTIIMTTYYISAAGPKLRRAACQWMAPAAQRRFLFVWTVSQSQISS FLFSRAILALLNAFFTGICLMLLHVPYWLPLALFCGVVSQFIPMLGTYIGGALPVLFAWG SCGLWQAVAVLVFICVYQQIENLIFAPKISQRTMDVNDAVAFLAVLAFTSLFGALGAFLA LPVVASVQTIFRTYTKRYELVDSPLMDDPVPEKKSKLVEGAEVLSEHLHNMPRAVQGSSA HVPIPDEVRQLQEQAYNITRSEESLESDETVAIPKHVLDKTERKPLQGLESENTSQESNE NPESGNERKNGESREAEGSTKNADDNPRSRWR >gi|222441572|gb|ABXX02000001.1| GENE 198 226361 - 227284 1148 307 aa, chain + ## HITS:1 COG:Cgl0614 KEGG:ns NR:ns ## COG: Cgl0614 COG0463 # Protein_GI_number: 19551864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 4 239 9 243 251 92 30.0 8e-19 MLNVSIVIPAWNEEERINDCLLNATRQTVMPHEVIVVDNRSTDSTVAMVEQFIKDHPEAP IRLLHQDEEQGLIPTRDYGLNHATGDILGRFDADCMIRPDWVEVVSGIFTEDPEAMGATG PVMYYDLPSRHFGLRGDNSTRKRIYKADGGQPLLFGSNMAVRASAWREISDEVCRDKADV MHEDIDISLHLLGKDLKTVYCPRMIAGISARRMDTSLTSFNNYMRRFKNTFDAHPQHSRK HKPEILLTALYPVMHLLYPVWQKVLDTADINPAEAAWINEQMELAEQEGREWYDDTPTDE EWSEKHE >gi|222441572|gb|ABXX02000001.1| GENE 199 227491 - 228642 1671 383 aa, chain - ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 381 2 381 383 423 57.0 1e-118 MVYRMIFNQTAYFGRGAIKEIPGVAKSHGFTKAFIVTDPVLLETGTVKKVTDVLDEAGMP YEVFDNVKPNPPVECIQDGVAKFAASGADFLIGLGGGSPQDTCKGIGIITANPEFADVLS LEGVADTKNPSVPIFGVPTTAGTASETTINYVVTDTANKRKFVAVDPHDIPIVAFVDPDL TDSMPRGLKVATGLDALTHAIEGYITPGAWSLSDCLSMQTIRMIAKNLAKSADGDVPAGE QMAYASYITGMAYSNVGLGLVHGMAHPLGGRLGVAHGVANGILLAPVMEYNKDFTGEKYR DIADAFGVEDAYTGDLETVREEAVQAVHKLTVDLKNPTTISEVGATEADLEALAHDAFND VCTPGNPRQATEEDILAIYKSLM >gi|222441572|gb|ABXX02000001.1| GENE 200 228828 - 231065 1813 745 aa, chain - ## HITS:1 COG:RSp1097_2 KEGG:ns NR:ns ## COG: RSp1097_2 COG2200 # Protein_GI_number: 17549318 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Ralstonia solanacearum # 34 281 22 269 272 170 34.0 1e-41 MGNQFDVAAGARLESTGRAPSNDEIVPRFSLDDINQAFDNNEFCFYLQPKCNAETGAIVG AEALVRWNHPEYGLVSPGEFIPLLERESMVTRFDLFIWRSVCEMLSRWDGEGRNLVPVSV NVSMTDIEAIDVARVLGDLLDRFSIDARLLQVEITESAIAHNMDVVEETIRDLHARGIAV LMDDFGSAYSSLNMLKDINVDAIKLDMKFVDLNADNAAKGLKIIESVIDMAYQLRLSIIA EGAQTAEQVSKLRELGCMYIQGYYFYRPLTVGKMEDLLEHRPDDQHFWNISKDLMHRDYR MSTNGRSMLESSSLSAHIFEILNKGVAELSRLNLITGEYRTIKRDPKLPDVYADDFHDFC HALVSKRIIHPDDAGEFLKHTRLSDLRDQLFSKKKSEFTYFRSEVEAKTSVIAFGMLVPP DCSEANPWAVVLIGFDLSLDLIAKNMKEIYRQDSLTGLLNRNAYDSDVEQLRSADIGAVV CVYADMIGLHEVNNHLGHKQGNRMLCEFADAARAFFGDDRLYRIGGDEFVIISSAHTEAQ TRKQLNYMRERLHTQGCEISVGVASSESTSDLPKIVEQAENEMRREKKEYYVRGGSKRQL RGLNKKLEDILVRNQDMESLLRHLNGRYSIACMVNLRTDSQRAIMVPDYFQKMLDAHDGS FKSALHDYCERLVAPFCKDSFSLLMDYDFIHARVESVGVLQYGYTRNDGEKFLLTIFADR RSKDETMWVFSKDDLPQVELELFES >gi|222441572|gb|ABXX02000001.1| GENE 201 231058 - 231723 784 221 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1526 NR:ns ## KEGG: BLJ_1526 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 221 1 221 221 370 95.0 1e-101 MSVNDMIKKSVLKSFGQYNVPKMALALLVALIVGIVIYCVYRRFYTGVVYSRSFAVTLVG MCVLTCMVTLAISTNIVISLGMVGALSIVRYRTAVKDPMDLLYLFWAITSGIAAGAGMYV LVIVAGLVMIGMLALFYSRQDKGRVYIAVIHYVGDVVGDEITRAFGRTKFFVKSKTMRGE RTEMAVEVFCDDKDMTFAERVRAIEGVEDVTLIQYNGEYHG >gi|222441572|gb|ABXX02000001.1| GENE 202 231813 - 232637 963 274 aa, chain - ## HITS:1 COG:no KEGG:Blon_0632 NR:ns ## KEGG: Blon_0632 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 274 1 274 274 537 95.0 1e-151 MCSDGGNRGTSLLQRIKHRVGEELSVPPRTAKERFRHELKYLISYAQKADLNVRMAPLLG LDKHAKNGGYMIRSLYFDDYWNTAYQEKVDGVLLRRKYRIRIYDYSDRVIKLERKRKSDS WIYKEDAPLTHEQFDRILAGDYEFLRDSEYQLCREFYVECMCNVMRPRVIVDYEREPWIL DAGTVRVTFDMNVRAAVGGFDVFDSTLPVLPVLEPGKLVMEVKFTEFLPQVVRDLLPGKA QELTSASKYVLCYDKASYLRGFGYWQEGWSVPSL >gi|222441572|gb|ABXX02000001.1| GENE 203 232627 - 234441 1808 604 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1528 NR:ns ## KEGG: BLJ_1528 # Name: not_defined # Def: membrane lipoprotein lipid attachment site # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 602 1 602 603 1068 90.0 0 MTWWNRRNTKAITMLVKQIAALTAMLTVLSCAGCATSSPNDNEQSQSSDSSQTHEQVKKS AEQSIDGAHLRDNESLYKVYDDSGVETMYLTVSRGNSSEGTDHSWSEINQYSVDDYAAMG VDRYKVNGLLQVGDEQGPVSGELGFGESAPNATVQIRGQSSSKNEQKNYKIELKSGKGKW RGQRTIALNKHMGEGLRFRNKMAYDLIKGIDQMMGLRTQFVHLYVKDETSGSDSFDDYGL YTQVEQLNKTALQVHGLDKNGQLYKVNYFEFYRDEDVIKLADDPDYDQAKFEEKLEIKGD NDHTKLIAMLNDLNDYSVPMGEILGKYFDTENLAYWMAFQLLTGNIDTQSRNMYLYSPTN SDTFYLLDWDNDGMLMRKEYEIRQRSEGQSWENGVSNYWGNILFRRCLQTKSFRTALGKA VKDEYKYMSADRINSMVRRYRSIVEPYVRKMPDCMHEPLTSSQYDTVANQLHSEIEQNYQ TYRTGFNKPMPFYIGKPTPTNGKLKLSWDVSYDFNDEDLRYSVTVAKDYEGKDVVFTQSD LVLPEAVMDMPGEGQYFIKVSVRNASGETQDAFDYYVTDGNKVYGTKCFYVKADGSIVED ANVQ >gi|222441572|gb|ABXX02000001.1| GENE 204 234438 - 235925 1529 495 aa, chain - ## HITS:1 COG:CAC0735 KEGG:ns NR:ns ## COG: CAC0735 COG4267 # Protein_GI_number: 15894022 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 2 451 21 469 478 182 28.0 2e-45 MLRAYGYAGVICAGPMLLGVLLQFGVLIVSSWWQVGRPDRDLLVCMITYTLLASLVLTSF LSMPVTRFLADMLFDHDEKMILPSFWGSTGIMLVVGAVLYTVFLLFSGATLMQGALCLWL FLEMIVNWNAMSYLTAIKDYKSILYSFVAAVLVAFVTSCVLLALACPPVESLLFAVVLGY GVMLVWDVLLLHRYFPQSRKHPWLFLQWVDQFLPLALTGLLTTIGLFAHLVITWCGPLGI KVKGLFYGAPYYDVPAMLAFLTILITTVNFVVSVEVNFYPTYRSYYSLLNDGGTVKDITV AENEMLAVLNRELHYTALKQLLVTAAVISLEKTVLNALPLGFSDVMHGYFRVLCVGYALY AVGNTVMLILLYFTDYSGALTASALFAGSTVVFTVIGQFFTTSLFGFGFLMGASLFAIYA TFRLASYTDNLPYRVLGQQPIVAQTKRGRFTELGILLEHGEQRVDQSLHRSGHARSSDKA NIAETDVIIGRNRKS >gi|222441572|gb|ABXX02000001.1| GENE 205 235984 - 237420 1351 478 aa, chain - ## HITS:1 COG:CAC0734 KEGG:ns NR:ns ## COG: CAC0734 COG0438 # Protein_GI_number: 15894021 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 1 462 1 464 471 385 40.0 1e-107 MRICLVLEGCYPYVHGGVSTWMHSYIEAMKEHEFVLWVIGAKAEDRGKFVYDLPDNVVEV HEVFLDDALRLSGERAQVSFTEEELRSLRELVNLGSPDWDVLFNLFHTRGVHPLSFLQSR EFIDLFTQICMEEYPYVAYADAFHTVRSMLLPVLYLMGCEVPEAQIYHAISTGYGGLLAC FGGGGINHAPVLLTEHGIYTREREEEIISAEWVSPAFRPRWIRFFYMLSEQIYHRAWRIT SLFGRARLIQIGMGAPADACQVIPNGIQYERFCDIPLKPDDGWVDIGAVVRMAPIKDVKT LIHAFHELSSRVDNVRLHILGGVDDQEYADECYELVEQLGVRNLEFTGRVNVVEYMRKLD FTVLTSISEGQPLSVLESFAAARPCVTTDVGCCRELLEGEEGDDFGTAGFYVPPMYREGL SRAMERMCSSRTLRETMGQIGRNRVNAYYRHERMLDDYRKLYSDTADQFGLNQFGLER >gi|222441572|gb|ABXX02000001.1| GENE 206 237417 - 239297 1599 626 aa, chain - ## HITS:1 COG:CAC0733 KEGG:ns NR:ns ## COG: CAC0733 COG4878 # Protein_GI_number: 15894020 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 69 587 55 567 600 246 30.0 1e-64 MIRGFLSDVLAKWKRFRWQGLVKVWAVFMAIALVLLVESLGVHYGVTRFDITYLDRNKAI PAANAIAGEKATNLLVVDSSQEGVSDAEAMLDQILLDMKVPTTTVDVADENAEFPALTHY STIVVAMPNLDRLGEHVLQIMQWAKKGGGVMFAMTPEKTGYLDVIGPQIGIESSAYEYVL TKGITPSKDFMLGGGQTYTFSDPFESSLSVALHDRAQVKAVSSNGRTPLIWSTFVNSGSA VVCNIGIYGKVLRGFYASAFSLLGSATAYPVINSAAFYLDDFPSPVPSGNGKYIKRDYNM SIAEFYSQVWWPDLVRLAERYGIRFTGVMIENYGDDTKDDPVRQTDGAQFEYYGGLLLRQ NGEIGYHGYNHQPLVLPNTDYGKEYAYVQWPNRKAIVDSLNELIAFQKDVLPAATSSVYV PPSNILSQEGRKIIGEDVSQIRAIASTYMPSDSSLTYVQEFGVAADGVVEAPRIVSGGMV GDMYMRLAAVSELNMHYVSTHFMHPDDLLDEDRGAKEGWKKYYQGLENYLDWLESSAPSI RMRTGTECAAAIQRFSGLTVSMETSDDSWDLKLGNLTDQGWLMFRANNGTPGRVRGGSLT KLTGNLYLLKATNATVHIERKTGGEA >gi|222441572|gb|ABXX02000001.1| GENE 207 239294 - 240187 849 297 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1532 NR:ns ## KEGG: BLJ_1532 # Name: not_defined # Def: membrane protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 297 8 304 304 541 93.0 1e-152 MLLIVIHVLVCVLMCVLSRFGVLRVEGRLLPFMLLVPLWGPLCVLLLHVRTLIRAGEHTA PDLEQMRVDDEERRSILVEERADFANTVPLEEALIVNDSSQRRSLVMSILNDNPSHYIDV LSQARLNEDVEVVHYAATAMAQISAKEDLALQRCRNDYLQHRNSETMLERYCDALERYIN SGIAQGYALQLQKQRYAEVLQERLRQHGDYYVACRLAQMQIDLGLFDDAAHTIDGAMEQW PDQGDVWLMRLRLDAARNDGDALRHTVQQIESKHIYLGGQGRRVLRFWTGTKEAERA >gi|222441572|gb|ABXX02000001.1| GENE 208 240205 - 242361 1540 718 aa, chain - ## HITS:1 COG:CAC0731 KEGG:ns NR:ns ## COG: CAC0731 COG0451 # Protein_GI_number: 15894018 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Clostridium acetobutylicum # 183 688 203 717 725 165 22.0 4e-40 MEVLLVGNTDFITKQWIQHSFPRDHVVIAEREGTVDGNDRLRIVNMSDANTLAETLTTYE FDRIVFFSEGLTPRSERDGDLGYLRRLLHAIRNRSTQMLMVCGPESEFTYPENADVRDTS KSLMSRASEELCLYYARTYRLEAKIIRCPYLYAPERNGATAYFGRLFEQASAGSISFCER KQQQTCFLCADDLAELIYRMFDDWTAESEIFHVPNVFDFTYGDLADAISAAFPGLSVTFG KDRPQHYPADDHVLRLRYGWSPRYSLKQDLPPVLQRWKEARAQEQSKKHPVWDFLRNHSK PWIAIEIFIAFILEELLRTAVQGNSQLGTVDLRLFFVVIVGTMHGLNAGVFAAALACVGM ALSYASKGASFAPLFYDTSNWLAFVVYFVAGAVCGYVQLRNRENLRFMRDENSLLRERLA FLRDLYHDVLDDRRMLRGQIIGRRDSFGKMYAMTRELDEVQPQKLYHTTIRIMQDTLGGD SFGVYRIDSGGRFARLMAASPQTESLFSKSALLENYANIITALDHGGLWVNRNFEPDLPM YAAGVHADGKLAVVIVLAKAQPDQMNLYFQNLFTIMCGLVESAMVRAFDYENVARQAMLV PGTEFLNTRAFLPKVLAANELKHDHMGDHLLLRVDDAWQDNGSRLMGAIRQTDEAGVLQD GNVYVLMNQAGKHELPIINKRLAQAGLHVTRVSGQEEDALLDEASEQVAAESHEGGTA >gi|222441572|gb|ABXX02000001.1| GENE 209 243119 - 244012 925 297 aa, chain - ## HITS:1 COG:HI0340 KEGG:ns NR:ns ## COG: HI0340 COG0220 # Protein_GI_number: 16272292 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Haemophilus influenzae # 39 294 24 243 246 135 34.0 8e-32 MQEDVNTPTENQVNGENEQSMSKTQDEQRADAGQRPALYGRKVLSFVRRSARLDARLQRA WDAYADTYLLKINAGEGSLDVRGDLVFDRAYIADVWGNVNPLIVEIGTGQGENVVAAAAE HPDMNFLALEVYDPGVAHTMLLAGKQGLTNLRIAQVNAPELFKAAADGSIAEVWTFFPDP WPKMRHHKRRIVQPELAGEIHRTLRDGGVWRIATDIEDYALHVHEVMDGLEGFHNDGMLT VSLPVEHVGKGNADEAAGLRHADFTESERFSGRILTNFEKKGLAAGRVIHDLTYRCV >gi|222441572|gb|ABXX02000001.1| GENE 210 244187 - 245197 1361 336 aa, chain + ## HITS:1 COG:all4713 KEGG:ns NR:ns ## COG: all4713 COG1087 # Protein_GI_number: 17232205 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Nostoc sp. PCC 7120 # 2 320 7 328 332 260 45.0 3e-69 MTVLVTGGCGYIGAHVVHALHQAGEQVVVVDDLSYGKPTRIEGSRLYGMDIAAPGAGERL AEIMKAEGVESVIHFAARKQVGESVEKPLWYYQQNINGMLNVLIGMRDSGAKKLVFSSSA ATYGVPPVDVVPEDVVPMLPINPYGQTKLFGEWMARACEEPYGIRFCGLRYFNVAGCGPV ELEDPAILNLIPMLFDRLKKGKAPAIFGDDYPTPDGTCVRDYIHVSDLADAHIAALKYLD RDERKYDAFNVGTGEGTSVRQIVDEVKKVTGLPFEETVMARRAGDPPHLIGSPKRINEEM GWHAQYNVEDIVKSAWDAWQANPEHHIDVETWKQTD >gi|222441572|gb|ABXX02000001.1| GENE 211 245692 - 246189 547 165 aa, chain - ## HITS:1 COG:MT2293 KEGG:ns NR:ns ## COG: MT2293 COG0394 # Protein_GI_number: 15841726 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 4 165 7 157 163 100 40.0 1e-21 MYTVMTVCTGNICRSPMAEIILRTEFERRGLADKVNVESSGVSDEEYGNPIDRRAVKVLR ERGYELPAHHFAHRITRDEIERTDLFLPMTASHMRALLRQLPQAKRENVHMYRSFDPNLA KPVAGYESEIDLVDPWYGGAREFEVAIDQIEEVAPFIVDWVERQL >gi|222441572|gb|ABXX02000001.1| GENE 212 246194 - 246859 760 221 aa, chain - ## HITS:1 COG:BMEI0609 KEGG:ns NR:ns ## COG: BMEI0609 COG0262 # Protein_GI_number: 17986892 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Brucella melitensis # 50 217 15 169 172 127 43.0 1e-29 MEHDSSRSGYHEPEPGLAGLEDEEDWGDDFPKTFSVNLIWAQACDKEGHDGAIGFEGGMP WHLPEDMRRFKELTVSHPVIMGRKTWESLSPKYRPLPNRDNIVVSRDPAYTAPGATVVDS LDDALDLARQEAIPDDGLDRSEIWIIGGGQLFREAMPFADKAYVTQISMHADADTYAPDV KSLVESGAWKVLEEGVWQNTRKGSGDIAGFRFMTYAKNREE >gi|222441572|gb|ABXX02000001.1| GENE 213 246917 - 247828 817 303 aa, chain - ## HITS:1 COG:Cgl0821 KEGG:ns NR:ns ## COG: Cgl0821 COG0207 # Protein_GI_number: 19552071 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Corynebacterium glutamicum # 36 303 3 266 266 396 68.0 1e-110 MLDLPFCTVKLATMALTPEQLADIRTRIPARPETDIPMPYEDLVRKILTEGTLKSDRTGT GTVSLFGQQMRFDLSEYFPLLTTKTVFFKGLAYELLWFLKGSTNVRWLQERNVHIWDEWA DENGDLGPVYGAQWRSWPAPTPDDPNRTIDQISNVLDLVENHPDSRRMVVSAWNPAEVEN MALPPCHALFQFYVADGKLSCQLYQRSCDMFLGVPFNIASYSLLTLMIAQQAGLQPGEFV WTGGDCHVYDNHIDQVLEQLSRDPYPYPQIRINKADSLFDYDYSDFEIVGYQHHPTIKAP VAV >gi|222441572|gb|ABXX02000001.1| GENE 214 247956 - 248369 582 137 aa, chain + ## HITS:1 COG:MT2992 KEGG:ns NR:ns ## COG: MT2992 COG1765 # Protein_GI_number: 15842468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Mycobacterium tuberculosis CDC1551 # 4 134 3 133 137 67 31.0 8e-12 MGKRLWVERNKDGSWDAFGEDGAHIKFGKGRGQFTPGDLMKIALAGCAALSSQFAIEHTL GEGKGAKIVVDGTYDADNDAYIGFDEQVVIDATDAGLSDEDAAKLKERVTRHIDKGCTVK HTYVEKTPVRMDVIIKH >gi|222441572|gb|ABXX02000001.1| GENE 215 248452 - 249486 1294 344 aa, chain - ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 1 286 1 293 301 117 33.0 3e-26 MINDKAILVGVDGSHASYKATWWAANYAKHAGLTLQIVCAYSLPSYAAVSFDATYTAMGD DNAAHSDAQEILSKAKAIADEQGVEATTLIVTGDPASVFVELSRNYNLIVIGNRGKGGLA ERLLGTTSSSLPAYAYCPIVVVPYTDDDGNLMHLNNTITKVAVGSDESKWGLKALEIAAN FAAAWDAELDVISAVPNMKGSDDEGVMASFKDDLEVRIKPLEEAHPDLKINKQIVPGPAV GALTKASYDHDVVVVGSRGRGGFTGLLLGSTSQGLLQHAVGPVYVVPRKYVEAAETRLDT VPSSPAEVKPKALDDIKGVEEVPVSKAEPDVVEAIETKIDPDRQ >gi|222441572|gb|ABXX02000001.1| GENE 216 249650 - 250387 608 245 aa, chain - ## HITS:1 COG:CAC2663 KEGG:ns NR:ns ## COG: CAC2663 COG0791 # Protein_GI_number: 15895921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 115 242 128 253 255 96 42.0 4e-20 MNIAKRFTSIFAVVAVSALLGAAVPAASAGGAMADTTVTATRSFPKTTAAKRDFLAEHTS TDVESNADWGGIESLDVPQTESQAEKDQKAQEQAEAEAQAQAAQAQAQAESQAASRSSDR ASISVPTAPASATGQALADYALQFQGYPYVAGGNTPSGWDCSGFVQWVFAQFGVSLPHYS GAQMSVGTAVGSIAEAAPGDIIVNTQHAAIYIGNGMVINALNPAQGTQVTSLAVFSGGYA IRRVL >gi|222441572|gb|ABXX02000001.1| GENE 217 250527 - 251468 727 313 aa, chain - ## HITS:1 COG:SA2437_2 KEGG:ns NR:ns ## COG: SA2437_2 COG3942 # Protein_GI_number: 15928230 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Staphylococcus aureus N315 # 202 311 6 114 117 111 54.0 2e-24 MRHAAHKAAKVSNERFSVAKALFTSSRGSHTAKAVRMVQLANGGGAVVGLEPAVAEKLNE VAPMSRRAMREAARAAGRRSAFMASASLAALVGTAATAMAVGQQNASEMTFADNATTTTQ MKRVSDDAASRSESRSDLDALASTSNSGDWQLGETSSSMDTNLLSKSIADNPNVAVLMDQ DAGLLPSGFNPNHGTGDTGNDYPYGQCTWWAYTRRAQLGLPAGSHFGDARSWGDSARALG YWVDNTARHVGDIVVFAPGQMGADSYYGHVAIVEGVNADGSIKISESNVRGLGVISDRTF TAQEASQLTYIHY >gi|222441572|gb|ABXX02000001.1| GENE 218 251651 - 252793 1099 380 aa, chain + ## HITS:1 COG:ML2136 KEGG:ns NR:ns ## COG: ML2136 COG1932 # Protein_GI_number: 15828146 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Mycobacterium leprae # 1 380 5 376 376 419 55.0 1e-117 MTNTVTIPSNVLPEDGRFGSGPTKIRPEQIQALDKGARNLLGTSHRQTPIKQVVGSIREG LSEFFQIPDGYEVVLGNGGASAFWDIACASLITRKAAFGTYGSFSSKFAKSAQSAPFLEE PEIFAGEPGTYRLPELTEYVDTYCWAHNETSTGVAAPIKRIAGTKEQGALTLIDATSGAG ALPVDISQTDAYYFSPQKAFGSDGGLWIAVLSPAAIERAYGIAKSVDLPGARRWIPPFLS LTSAIENSRKDQTLNTPAVATLIMLENQVRWLNDNGGLAWASARCARSASLLYQWAEKSD YASPFVNDRNARSNAVVTIDINDGINASQVVAALRENGIVDTNGYRKLGRNQLRIGVFPS VEPSDVDALTRCIDYVVEHL >gi|222441572|gb|ABXX02000001.1| GENE 219 252815 - 253069 293 84 aa, chain + ## HITS:1 COG:no KEGG:BAD_0382 NR:ns ## KEGG: BAD_0382 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 84 1 84 84 148 86.0 9e-35 MKIAPIIDPSVRKPSPKPVRVDLRKVFMFGTALWAIALVVCIVLIAFGIDAERAQTVCEA GTVIGVLMLVWEHFDRWDYRRLGE >gi|222441572|gb|ABXX02000001.1| GENE 220 253193 - 254374 1356 393 aa, chain - ## HITS:1 COG:ML2440 KEGG:ns NR:ns ## COG: ML2440 COG0642 # Protein_GI_number: 15828318 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 35 389 53 375 441 146 32.0 6e-35 MVESLGSWWRSLTHRNDDDEHDADDDTLDDATNALLSMLPLASVVVDEHDEVIRAHPSAY ALGVVRDDAIAEETVLRAVHEVRSCGGNKQFDLTTTTQYVAQQVPKAGKPTTREIARQAL IGQSNPNTSGATVSRPNWLKIIVGKLNENLMVVLISDVSESVRFSQVRDSFITNVSEQLL EPTQSLEQLADIVERGGASQQDVERNATQLRQSCSRLEHMISDLLLLIKAQEPILPTADN RINVMEQVQAVVQAHLDMAAQRGITIETGGDESLCINGEADQIQAALAKLIENAITYSKD GSTVNVVAKANEEHTEAVISVLDRGKGIAIGEQNRIFERFYRGSNQNEHSGDGIGLGLAI VKHVALTHHGSASVWSSPGQGSTFALVLPLGGE >gi|222441572|gb|ABXX02000001.1| GENE 221 254568 - 255248 1028 226 aa, chain + ## HITS:1 COG:MT3400 KEGG:ns NR:ns ## COG: MT3400 COG0704 # Protein_GI_number: 15842892 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Mycobacterium tuberculosis CDC1551 # 1 216 1 216 221 125 35.0 4e-29 MRVIFNEELKAVADDLDHMVKGVRKAINGAGDALLNQNLEAAQAVIDGDIEIDALEASVV DQCVKLLAKQNPVATDLRVVVSTMRLATTFERMGDLARHIAEAARRTYPASPLPAEAQPL FAEMQAFLNDVADQTVAMLSDRDTKTAEQIIINDDKLDELHKKTFELAQSADWSGTNQQL IDVVLIGRFMERLGDHAVSAARRVVYIVSGFDPSKEPTRDEDTDIA >gi|222441572|gb|ABXX02000001.1| GENE 222 255491 - 257350 2153 619 aa, chain + ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 1 619 1 591 591 662 50.0 0 MYYSNGNYEAFARPKKPEGMDSKNAYIIGTGLAALTAACYLVRDAQLPGSHIHVFEKDAV PGGACDGANIPGVGYVMRGGREMDNHFEVMWDMFRSIPSIETEGVSVLDEYYWLNKEDPN FSLCRSTKARGVDAGTNGKFNLSDKASMEIMQLFFTPNEELYGKKISDYFDDEVFNSNFW MYWRTHSALEMKLYIRRYIHHIGGLPDFSALRFTRYNQYESMILPMIKYLEGFGVQFHYN AKVENVDFKIGGGMGPVRSHTGTGQDTILKKQAESGVFVRNPYSSPTKKMATRIDLTEAD GTARSIDLGENDLVFITNGGCVENSTMGSQTEAAAWAPEIKPGGGWDMWRRIAKQDPSFG HPDVFCGDPEHSKWMSATVTTLDMEIPPYIQKICKRDPFTGHVVTGGIVTVEDSNWLMSW TLNRQQQFRDQPKDQLCVWVYGLFPDKPGNYVKKPMQECTGEEICEEWLYHMGVPTDKIK ELATNHANTVPVMMPYIDAFFMPRSAGDRPDVVPDGAVNFAFLGQFAETPRDTIFTTEYS MRTGMEAVYTLCDVDRGVPEVWGSVYDVRNLLNATVMLRDGKPITDMKLNPIEKTVLKQI LKKLDSTDIPMLLKEYGVI >gi|222441572|gb|ABXX02000001.1| GENE 223 257538 - 258278 965 246 aa, chain - ## HITS:1 COG:Cgl0397 KEGG:ns NR:ns ## COG: Cgl0397 COG0588 # Protein_GI_number: 19551647 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Corynebacterium glutamicum # 4 246 5 248 248 301 65.0 1e-81 MTYKLVLLRHGQSAWNKTNQFTGWVDVPLTEQGVEEAKNGGRLLKEKNVLPDIVFTSMLR RAINTANVALDEADRLWIPVKRSWRLNERHYGALQGKNKTEIRQEYGDEKFMLWRRSYAT PPPEIDPNDEYAQNNDPRYTGDPVPEAECLADVVKRVEPYFKSDIEPELKAGKTVLIAAH GNSLRAIVKMLDNLSEEEIAKVNIPTAMPLLYELDENFKPIKPRGEYLDPEAAAAGAAAV AAQGQK >gi|222441572|gb|ABXX02000001.1| GENE 224 258431 - 259531 512 366 aa, chain - ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 3 249 13 223 298 146 38.0 6e-35 MGMTIWIRGARPQTLPLGLAPVLVGVAASWRWEALGGLRSCPAFPGRLLEEHDAGDVLGY CAFSRPWFAVVAMLCAVVAVGLQIAVNYLNDYADGVRGTDARRGSDAAGPRRLVASGVDP SHVLLAAAVAALAACAAGLVAVVITGRWWLIALGATCLVAAWGYTNGRHPYGYRGLGELA AFVFFGLVPALGTQYALSGSITVTGVAGSVICGLLSVSVMMVNNLRDLEDDAAHGKRTLM VRIGSGKGKCWCMRALGWAAGLTVVFAMPLSVYAKLLDLLIKLPAEVDRDRSCTEYGICG DWSWGNADWMSLAAFVSIAGCVAIATRAVAAVRHDQWRRALPLCSMTSLVAAGAFVLNAC QAGFMA >gi|222441572|gb|ABXX02000001.1| GENE 225 259928 - 260728 666 266 aa, chain - ## HITS:1 COG:CAC3665 KEGG:ns NR:ns ## COG: CAC3665 COG1073 # Protein_GI_number: 15896898 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 18 243 17 241 265 130 32.0 3e-30 MSVMEPAVFTVERADGTSLTLRGTRYLPEGFSEDGHSPVAVLFHGFGGNRIDFSGFVVQM ARELASRGLVVVTYDRAGHGESDGTFFDTTVSGDVEDALQVVEQARHMSGCDPDNLHFAG LSLGAVICTLLAPKVPGQPKSIALCSTATSYVDEIAGGHIQGKPLSAIEEQGYLDFMGVA MGPAMVEDAGRTDPYGMACGYRGKVLAIHGTKDFIPVDYIRRYEDVYGENMQLKVIEDGD HGFGNVKHREMVMPALGDFVAEQAGL >gi|222441572|gb|ABXX02000001.1| GENE 226 260835 - 262190 1455 451 aa, chain - ## HITS:1 COG:CAC3422 KEGG:ns NR:ns ## COG: CAC3422 COG2211 # Protein_GI_number: 15896663 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Clostridium acetobutylicum # 6 448 4 443 445 261 36.0 1e-69 MDNANVKLSLKEKLSYGASDCAYNLVFNVVTTYMMFYYTDVAGISLLSVGTLFLVVRVLD AIAGPVVGALIDKTHTKWGKVRPWFLWFGAPFAIIGVMAFSVPNFGGVIKMIYVYVTYIM MNFLAVTVTTPCTALLPNLTTNAQERVNANAFRNVGGQIGVIASGMLTLPLVNLIGGGNQ QLGFTVTMIIYGVICVGLLLLTFANTRERVFTPKEKEPPFIKSFVAMLHNGPWWILVTLN LVMFIGVVTKASSIVYFFKYNVGNETLSSLANGINSAGMIAGMILAPFFAKKMKNRNIAI MFFGFGIIGLLGLYVGAKIMSIPLIFVSMAVSALFQTGQSMGFVMLADVVDYGEWKTGVR SQGLITSCAAIGVTCGAGIAGWLSSFVLEINGFVPNQEQTAQALNAININFVWIPIACCA IGTVLMLLYKVDDQIGTIREELAVRNQVVAE >gi|222441572|gb|ABXX02000001.1| GENE 227 262499 - 263548 514 349 aa, chain + ## HITS:1 COG:RSc1014 KEGG:ns NR:ns ## COG: RSc1014 COG1609 # Protein_GI_number: 17545733 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 19 341 4 337 347 152 31.0 7e-37 MTLSSSQTNMRTASQRPKLSHIAKLANTTPSTVSKVINGRSGVSDETRQRIEALLKDMEY SKPPVKHALSTTIMLVLESMDNPWVLDIMQGATDTAVKRSMTVTICAKNASDGILNDTYR QAIRRARPKAVIFDNAYVPMRDRTLCQELGARYAVVDPSGTPCKDCMDVRIDNWTGGFEI GSHLINLGHRQFAAITGPMSTTCYPARLAGFRAALAQHDIVLNDTQVREGDYWSENARLH ALDLLQQKNRPTAVFACSDTQAFGIYDAAHQLGLSIPEDLSVTGFDDINSARHLGPPLTT MRQPLAEMTRATLATLLSKHQSEDAQRTLLFPPTLVVRESTGPAPEIRE >gi|222441572|gb|ABXX02000001.1| GENE 228 263743 - 265419 2334 558 aa, chain - ## HITS:1 COG:Cgl2631 KEGG:ns NR:ns ## COG: Cgl2631 COG1190 # Protein_GI_number: 19553881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 63 556 16 523 526 548 55.0 1e-156 MSETIESQENQNEEAAVPAMTTVERAEMLLQQDAAIYAKINDGATLDEAVDPGNKEFGPL AHPEQVQMRVAKRAMMLKDGIQPYPVTLDVTATIEEVRAKYDGKLEAGDETEDVVGIAGR VLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQFKQLVDLGDHLFIKGRVIASK TGELSVFATEWAIAAKALQPLPALHKDLNEDTRTRKPYIGMIADEKMRNMVRNRSKAVAS LRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVGGID RVFEINRDFRNEGVDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGTHKVTL LDGSEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGAIADKLGVERDDVE NHGKLVEHLWEHFYEDKLFEPTFVRDFPVETSPLVKGHRSKPGVVEKWDLYVRGFELATG YSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIAL TGATIRETITFPLVKPLN >gi|222441572|gb|ABXX02000001.1| GENE 229 265755 - 266942 1263 395 aa, chain + ## HITS:1 COG:araJ KEGG:ns NR:ns ## COG: araJ COG2814 # Protein_GI_number: 16128381 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 378 1 377 394 229 38.0 7e-60 MKRSILALASGAFILGAAEFVMMGILPQTAAAMQVSIPAAGHYISAYAIGVCVGTLILVF GRKVPPKNLIILFMIIALVGNTLSAVSFNSPMLLAARFISGLPHGAFFGTATLIAKTLAD KGKEAQSVSMMVTGQTVANMLGVPAGTLLSEMLSWRLAFAILAAWALMTMMLVIAWVPFV APIKDAGIKGQFRFLTHAGPWFILMAVFCGNSGIFCWWSYVSPWLQKVGGWDSSLVPLLM VLAGFGMVIGGIAGGRLTDLWKPGATAGLSQAIATVGLLLVFFVPGNHVTTALLTFLIGF ALFFNSSPQQLLMVQAGEGGGELIAGAAVQIAFNFGNAVGSIVGGAALTANTMNYHYTGL AGAPIALIAVIMLVTYSRRYETHTGATERMREVHV >gi|222441572|gb|ABXX02000001.1| GENE 230 267130 - 269247 1749 705 aa, chain + ## HITS:1 COG:FN0847 KEGG:ns NR:ns ## COG: FN0847 COG0457 # Protein_GI_number: 19704182 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 51 684 33 575 599 168 24.0 3e-41 MADSDVNLNMNNCDDGCATFDVQRFLRGLDAIFDAHKAPEQAEPYLQKARTEAEHSHNDA GLLTVLNETIGFYRSQGRHTDNLPIIRESLSIADHLHLQEIDPQAWATTLINVATGMRAA GRYEEAEQLYRQALDAATSVFSPTDRRLAALHNNMSMLYSETGRLNQAKRELEQALDLLE QSSPDASADIDVASTHTNLALLLLQMGRYWASDAIQHAQKALTIYRTGHLEHSAHYASAL AGYAQACYMAGRLQDAVSGYEHALSVIEECYGRNTDYYHTTAANLEAAKQALHKRMPSSH KTQESQEYQESQESLKSQHSPKSSESQQSSEPHYMAESGASSIPAISHHISGLALSRAFW NDLGKPLLAGAYSAYQGRIAAGLVGYGSECFGFDDEFSRDHDFAPRFCLWLTDEDYDAIG EQLQADYDALSRDFTVDEQGKPHFAGQGSADSNALAASQSPLTPRAQGEFRRDGVFRIGD FFERITLFREAPVQNDYASWLSLDDATLATATNGQVFADPLGVFSKTRQGFKFMPEDVRL SLISRRLGMMAQAGQYNLPRMLQRGDGAAAMLSIHEFVNATASLVFLINEPVSVGYLPYY KWQFAAMRKLSHRMATRLACVCEQLEDILRLSSAACFGGAGFGEGGKGAKPAAEHIIATV ERICSDVVDELLREGLTESHETFVEWQRPYVEDHIKSDASCLHSL >gi|222441572|gb|ABXX02000001.1| GENE 231 269318 - 269965 421 215 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1438 NR:ns ## KEGG: BBIF_1438 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 18 215 5 202 203 276 71.0 6e-73 MNGNVISDVIDGHDTANLVEPIIKLEWNQFQQTNNEGGRASCQGNWPMFHQMRASQFMTW PEELLRSYRSDLQEADRVGRNLVTEKYGRMMQSTYPQEYCANIAPYIPRISAGRNALQEG IIAVQVAWARDFRERFPHLGEAMRVLTTVEDTPETTSFETYLRGELGTYSDRTVALYRDF VERLRHEQRNLTEETIRNTVRLAGFEDLAQAEAAQ >gi|222441572|gb|ABXX02000001.1| GENE 232 270179 - 270754 527 191 aa, chain - ## HITS:1 COG:no KEGG:BDP_0502 NR:ns ## KEGG: BDP_0502 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 173 1 167 169 85 37.0 8e-16 MSDDKTQEMPVMTDAGDMPTETLHTVDAQSTYDQSQHSGRATQDDKPRVESVPAQSVPTY TASAAGANGGHKNRQIGDDIIRPSGRSGSTIALGVFTCFMGVVTLLCGMHVPMNLWWWAS DPKQSFVFLLGGIGVLLIAVAVIWAIVSAVRSNRSKNENDVDSDDPFDAPHSSDTTAFST DSDKSPLSERS >gi|222441572|gb|ABXX02000001.1| GENE 233 270757 - 272709 1219 650 aa, chain - ## HITS:1 COG:no KEGG:BDP_0501 NR:ns ## KEGG: BDP_0501 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 644 1 615 624 526 45.0 1e-147 MSNANNDPLGDRGNAGPQPAAGQPYYQQPAYGSPQPSRGGRFFAWIRSSQVKRGHDRWIG GVCDGIARRLGWNTTLVRALVVVATLFFGAGAAFYGLAWFVLPDERDNQILAEDLINGKW DWNCIGALLFCIVAICLPGAGWLAFALAALVLWLLLNRQIYAPNVRSNQCQQPPYGQPPY GQAPYGQAPYGQPQYGQPQYGSPSYRQPVHPASPSPAQSNPYTQPMQASGAYNGAANTAS SPESQSPQPQRPQPQQPPYHAYQQQANGPAAFATANVPPTFTAPVAPVAQTPTSPRRGRR KPAGPLLVLVMFGLTMIACALCVWCIMTYGVQGGQRGIEYTLQASAACVGGICLVTGIVI VALGFVGRRTGGLHPLTWISVFMSLVMVMALAGYSLFSHRIDTGIPSSYKTVNVSGITTM GSTASEMSKYEQGIVAQGNDYATDVLHIDLSDYAKNNGPHKVDLQDGTQGTTSCPTGTLN VVASSAQVVVTLPNGCWWTFGSDSNFYTITDFVGSPDGLTLDSGGVEFSILSNDSTKSVV KKRALGTYDWSCGSYGDESGIEDFDDEADTEDGTDTGTDSTRTDSPFKDGDVDKAYREIY DNHQYWPCFTGDDKAPVMPAGLQINDVATVGGSVAVQYASDNTLGKAGKE >gi|222441572|gb|ABXX02000001.1| GENE 234 272823 - 274439 1141 538 aa, chain + ## HITS:1 COG:Cgl0594 KEGG:ns NR:ns ## COG: Cgl0594 COG4585 # Protein_GI_number: 19551844 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 186 482 54 352 352 139 38.0 1e-32 MKSLGKPWYTQSQYDQASAVYMRYCCDQALHEGRPMPTQPAKLPLMRPPYGRMGAGVCKA ISMHLGIAVLWVRLFFLATTCLFGSGLIAYIFLWMALPVGDPIQQTYIIAGKRSPWQAPL SRGNMPYGTYPVSLEYQSFTATQDGQHTQPPSFEDTTERNDETHGNTQSSSENLEQTLKK APKPALLALAGLMLLSICFVMFAGGVERTLIVPLLLGLVGIGVSWLRFNAEEGQLWTMLG GIAIIFAAYALYVSSCMHFDAFSMIRILCAGLALLIGALLAIVPWIMALIRDLGTERASK EREEERADMTAHLHDGVLQTLALIQLHADDQQTVFSLARSQERELREWLYQERTTSDRSV NAGLKEIAAHVEDTHGKPIEVVTVGDARPSAQTDALLDATQQALINAVAHGGEPISVYCE ASSKLVEVFVRDHGNGFDVNAIPANRLGIRESIIGRIKRRGGTVEIVSRPQWGTEVRMHM PIADMPASAAADTNAQQSHEPQSNSQQTDFPNHHNRQSNNQRTNQFSNQPTNHFEEQQ >gi|222441572|gb|ABXX02000001.1| GENE 235 274436 - 275122 707 228 aa, chain + ## HITS:1 COG:Cgl0595 KEGG:ns NR:ns ## COG: Cgl0595 COG2197 # Protein_GI_number: 19551845 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 8 225 2 227 230 201 52.0 1e-51 MNEQEQQIRIAIVDDHEMFRAGVIATLQPHFDIVGQAADVEGSVAMIAQTKPDVVLLDVH VPGGEGGGGAEILVKSRAYSPNTVFLALSVSDSPQDVGSVIRAGAQGYVTKTISGDDLIS SIKQVHEGYAVFSPKLAGFVLSAFQNGSPAGMGGSASGPIHDDELDRLSNREQEVMRLIA RGYTYKEVAAELFISIKTVETHVSSVLRKLQLSNRTELTRWAADRRIV >gi|222441572|gb|ABXX02000001.1| GENE 236 275140 - 275922 741 260 aa, chain - ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 17 242 10 236 240 100 28.0 4e-21 MEDHTGIGRTRSATSELVYRIRARIREQELLPGEKLGSERALADSLGVSRSDLRNALTVL ESDHEIIRKIGRAGGIVISDGRLERNINTVESLPTIARRQGMRVSSKVLQAVIAPASVSD VRLLRLPGEHPMIYDITRLRYIENRPLSLERSHLPAYLFPLFLTRDLTTPFYTMFERDYG VYPCNVDETLESVVGDEQENELLQIKAGTPLMRIHRIAYASDGCPFERATDVYIADRMRF TMHHSGYVRLSATSTQNMTK >gi|222441572|gb|ABXX02000001.1| GENE 237 275956 - 277320 1565 454 aa, chain - ## HITS:1 COG:SMa1761 KEGG:ns NR:ns ## COG: SMa1761 COG0160 # Protein_GI_number: 16263426 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Sinorhizobium meliloti # 11 452 5 438 438 454 51.0 1e-127 MATRSTIMDTNSFRPEMAAALDPETRKLTEERDVLGPAYRLFYRNPVHLVKGRGSHLWDA GGEEYLDVYNNVASVGHCHPRVVDALTQQASMLNTHTRYLHENILHYAEDILSTMPDELD RIMFQCTGSEANDLAIRVAQTYTGGEGVIVTSEAYHGNSALTSKLSPALGTAQTLGLTMR MIPTPDTYRLVIDGKPAAECAAEEFGNWMAGEVCKAVADMERHGIKFAALLADSIFSSDG VYPDPVGYLKPVIDTVHELGGVWIADEVQPGFTRTGDAFWGFGRQGIVPDLVTSGKPMAN GLPTSMMAARHEVLEPFAGSIPYFNTFGGNPVCMAAAQAVLDVMRDEDTMSNAKKVGAIF KDAVASLMPAHPCIGDVRGAGLYIGCEIVKPGTKDPDQQAALDILETLRDNHILTSVCGR YGNILKLRPPLVFSESDVDWFMDGFMKTLETLKL >gi|222441572|gb|ABXX02000001.1| GENE 238 277545 - 279038 2074 497 aa, chain - ## HITS:1 COG:AGc3885 KEGG:ns NR:ns ## COG: AGc3885 COG0531 # Protein_GI_number: 15889424 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 485 18 503 518 370 46.0 1e-102 MTASTVSGRSIGGVTYVETDKDYFAKRQLKRTAGAFGLWAIGISAVISGDFSGWNGGIAQ AGWGGMLVAAIVVYLMYVLMLNSISEMASAMPHTGGAYSFARAAMGPWGGFFTGLAETIE YVMTAATIVYFSSAYADAILSNLTGYSLDDHGLAWVWWLALYAIFVVVNWLGAETSFRFA EVVSIAALAIVALFGIGAFATGKADFSTLLNITPTEGNSAFLPFGPGAIFYAMPFAMWLF LGIEQLPLAAEEVREPEKNIPKSSRLCIFTLGLSALIIVFLNPAVVGSEALAGSDEPLLD GYRAILPGNLAAVLSAFALIGLLASIQGIMFAYGRNLYSLSRAGYYPAFLSLTGKKKTPY WGLVVGAIIGFAALFIIAYGGDGAGSVVLNIAVWGAVLAYLLQMVSYVILRKKMPDIKRP FTSPFGVPGAVIAGLLAFCIFVAVLLNPDYRLAVYAMVVIYVLATIFFAVYGRKHLVLSP EEEFAASGGKVAYKTED >gi|222441572|gb|ABXX02000001.1| GENE 239 279226 - 280296 1177 356 aa, chain - ## HITS:1 COG:AGpA360 KEGG:ns NR:ns ## COG: AGpA360 COG2334 # Protein_GI_number: 16119479 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 350 37 353 355 174 33.0 2e-43 MAQQITRLLDDPTQAVSLDTFSGLTKGCPAPFWLFQGVCAAWGIDHQRAQLNLITVSENA TFLLLLDGEPQGVVRVSQPGYVGGPEAVASEISWLNALHDIEGISLINPVPTIRGTFVTK ITDLNGVGWTVISTKYVEGTVLEDLENPAPYYETIGEWAAKFHEQSRTWSKPYGFTRFNW DLSNMVGPAPRWGRWENANLTDEEKQLCDTALWKAMDVVMKVPRTNETWGLIHADLRPSN VIRGNDGRLTVIDFDDAGYSWYLYDYASSLSFIEHEPYAPDLAKAWVKGYQRVAGSFTDE ELRIMSALSMIRRMQMLGWTTSHREDALPDGLAAQQAPGSVMCAKNYLEDPLWLLH >gi|222441572|gb|ABXX02000001.1| GENE 240 280576 - 281136 600 186 aa, chain - ## HITS:1 COG:SMb20491 KEGG:ns NR:ns ## COG: SMb20491 COG1335 # Protein_GI_number: 16264221 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Sinorhizobium meliloti # 11 182 11 186 192 62 27.0 4e-10 MIAEDEWLVVIDRQRVFAESEWSAWACPDGSYHTTDEAFARLAKAFGDRVVYTRYVAPEP PQNAWVDYFKDWPQFLVAPDDPMYDLTADTAELAQGHAVVSCDTFGKWGSVLSEAIKGAK KITVCGVATDCCVLTTVLAAADNGVAVRVAADACAGSSPENHQMALSTMALFTPLVTVTD TDSIVG >gi|222441572|gb|ABXX02000001.1| GENE 241 281173 - 282624 1824 483 aa, chain - ## HITS:1 COG:Ta0597 KEGG:ns NR:ns ## COG: Ta0597 COG1457 # Protein_GI_number: 16081696 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Thermoplasma acidophilum # 22 384 30 376 460 109 26.0 1e-23 MSNEKGTLSIEEQGIDTISEEERKGTPASLFWPWFAANVSMFAMSYGAWALGFGISFWQA TAMTIIGVVISFLLVGIISIAGKRGNAPTMVLTRATFGVEGAKVPAALSWIATLGWEISL TTTAVLALSSTIEKLGWGSGVAPKIISTIVVVGLVVVAGIFGYDLIMRCQQVITIVTGVI TVGFFILGWGHIDFSAIDSVPAGSLPAMLGCCFFVMTGFGLGWVNIAADYSRYLPRNSSN GGIVFWTTFGASIANVFLIFYGLLLAVSNADMAENVGNDPIGAMASILPTWYLIPYTIVA VLGLMSGSIMDNYSNGLALLSFGVKLPRTVAAALTAALTVLGVVYVTFFSDTFIGPFQGF LTTLGVPMAVWAGMFVADVIIRKKDYSTADLYDPKGRYGAWNGKSFAILVVGTVLGWGLV VNTAASWLNWQGYLLFLIGGKEGSWAAANLGVIVALIIGLAGSLMFQRGDIAKQEADLPV SEA >gi|222441572|gb|ABXX02000001.1| GENE 242 282740 - 283741 400 333 aa, chain - ## HITS:1 COG:mll1743 KEGG:ns NR:ns ## COG: mll1743 COG0524 # Protein_GI_number: 13471693 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Mesorhizobium loti # 1 332 1 309 325 136 31.0 5e-32 MTGKVISLGQVIVDLTMNVDAVPRAGEDVFAGNVQTQVGASFNTLYAVRRMGVKASHAGV IGTGPWASQILQTLENQEIQHIGKRDAVHDSGFCVALTDANAERTFISTRGAEAYGSADA FDSVNPEKRDVVHVSGYTLVHHTADALLAFVKRTTEHREFTAVFDPSPMISAVDDDVFRV MLAYRPIWSCNEREATLIAQRLAALDSGDSCDCKVSRDMLQEIESANVNEETVAWLCDRL QSPVIVRVGADGAWSAIPGDEVLRIPGFPMKAVDTNGAGDCHAGVLCALLCEGVPLEEAV RCANAASALSVTRSGPATCPDRKEVERLLGRAF >gi|222441572|gb|ABXX02000001.1| GENE 243 283795 - 284811 639 338 aa, chain - ## HITS:1 COG:mll1744 KEGG:ns NR:ns ## COG: mll1744 COG1397 # Protein_GI_number: 13471694 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Mesorhizobium loti # 1 278 11 287 344 152 40.0 8e-37 MGAMAGLALGDAWGMPTQSMSDKQIRRYYDGPITKLMSAVPQQPIAPNMKAGAVTDDTEQ AFVLARRLIDDNGCIDNTRYAHDLLQWEAAMKAKGSLDLLGPSTKAALQKLTEGVSLEET GRFGTTNGGAMRATPVGIAFRPGQALADAAWRSCVVTHNTVQGIEATTLVAAAVSFAIEG ERDFLHLAVEFVRKLPQRGNWSAKASVLARVQYFMNWAETDGCRLNDNEFAAVLQRNCGT SVESNESVAAAFAIAARFFDDPTHALCFAASIGGDTDTIAAIAGAMLGAWHGMQGFDKTM LDQVLSQLAEDNHLDLVGTVTSLRALRDDSALNDVNIV >gi|222441572|gb|ABXX02000001.1| GENE 244 285661 - 287616 1974 651 aa, chain - ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 220 648 7 429 432 483 57.0 1e-136 MAVIGGFIIEQRQSADIHQTRTMRCGDGQRRIDIIHRNAHIAGKQIAGANRDDAQRVAGS RKCARHRAHRAVAADRDHHVGAMLQGFQRAGATILIKLRSDIFNLREMLRLTELLNMLLA LFRLWFRRIDHKRVMHLIIVALVELFRKFAMLIRAYCEKGGRAHRCDRKNDNQNDNRHRH VIYCSRKMRKKRIKTDLFDDSCTLYTKMRGLRRVSAFSTRLGGMLDIQFIREHADVVKES QRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQKEIGKKVAAAPADEKAKLIAETKEL SQKVSEYKAAADAAAEEYTTAMWKLSNVVEPEAPEGGEDDYVVVKKVGQIRDFAAEGFEP KDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIAMLTMAVDQAEEHGFTLAITPT LVRPEVMRGTGFLNSHADEIYRLREPDEQYLVGTSEVALAGMHENEILDLSDGPLRYCGW SSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDSYKEHEHLLAMEQEMLGKVEVPY RIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQARRLNIRERMEDGGTRA VSTLNGTLATTRWLVAILENHQQKDGSIVIPQAMRAYMGGKEVIEPTKWEA >gi|222441572|gb|ABXX02000001.1| GENE 245 287083 - 288189 1144 368 aa, chain + ## HITS:1 COG:sll0036_2 KEGG:ns NR:ns ## COG: sll0036_2 COG1597 # Protein_GI_number: 16331996 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Synechocystis # 97 339 66 289 309 87 29.0 4e-17 MPVIILIVVLAVAAVCAAAFFAVRAYKHRKLAEQLDKRDDDQVHYAFVINPSKPQAEQRK QHIQEFCEAKHLTQVEYIGTQLDKDGRACALEALEHGADVVVAVGGDGTVRTVASALSGT GHALGIIPIGTGNLFARNMGIPVDDIDAALTVATSHGSRLVDVGRLTLLDDEAADHGHAF LIIAGIGFDAVMIDDTDPELKKNISWLAYFVSGVKNLFAPKYKGDVTITSADGSTHTTHG LTFRTFMAGNCGQIPVFSLMPDAVYDDGILDYEIIDTSGGLIGWANLFGDVLHQTITGKA QQSPLSTNSTVDQIQGVSAEIKLEKPVLAQVDGDMLPETQHIRFSVERKSLCVRVPEAPE ANTSNVNQ >gi|222441572|gb|ABXX02000001.1| GENE 246 288244 - 289110 713 288 aa, chain - ## HITS:1 COG:Cgl2781 KEGG:ns NR:ns ## COG: Cgl2781 COG3711 # Protein_GI_number: 19554031 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Corynebacterium glutamicum # 93 273 1 188 197 153 44.0 3e-37 MDVLRVFNNNVVLAKDGNSGVILTGRGIGFQAKPGQHVDDAKIVRRFVPADGKDPDHMAQ QVAGIPPEIIRLVTDAMNRTGLKEQADRQPALVLALSDHICGAIRRSQNKQTIEYPLEAE VRSLYASEYAKGKALVDAMNTYLGGALPDCEAVALALHLVNAGFSTGDLSATYTMTGVIQ QMLTVIEGYYGITLDQNSVNVARFITHLRYLFVRIHQHEQLDDEPEPIVESIKTSYPKAS DCANKLAIIVKMRLNVSLSEAEIAYLTLHVARVTSHATESHENDDTNA >gi|222441572|gb|ABXX02000001.1| GENE 247 289138 - 291228 2456 696 aa, chain - ## HITS:1 COG:Cgl1324_2 KEGG:ns NR:ns ## COG: Cgl1324_2 COG1263 # Protein_GI_number: 19552574 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 121 511 1 366 415 357 49.0 3e-98 MADSLASQIITAIGGPENVRSLTHCATRLRFELVDASKVDQNSLEHMQGVLGAVPQSGDR FQVVIGGGVATVYENIMHLPEMAGVGGASASDDGQKSNADVKAEARSKARGKVAWLDSFF EYLSDSFRPILGVLLGASIIIALVNLLISLNVIPNDEVSAGWVFVKAIWKGVFYFLPIMV AYNASKKLKVDPWLGGAIMAMLMTPQFTGLMDAKTTTCVENAALGTKSCMANIFGLPMAL SDYSGNVFVPLLMAAVLALVYHGLKRIIPESVQLVFVPFFCMIIVGALTAFIIGPIGVWV GNGLGVGLAWMNTHAPFIFAIIIPMLYPFLVPLGLHWPLNALMLMNIQTLGYDFIQGPMG VWNFACFGATAGVLFLAVRDKDKDMRQTALGALAAGLLGGVSEPSLYGIHLRYKLIYKRM LVGCGLGGVVIAILGWLFPSVTAAGQTVHGVTTTAFAFTSLLTIPVFNQMWVYAVSIAVS FLTSFLLIITFDYRTPEQKAEVLARAAANQKTAVSSVEAKGVAPAAATATATVAATKTEA PAAAATTTVVNAPVAGHVISLDETGDPVFASRALGEGVGIQPADSTVVAPVSGVLQTVAE TGHAFGIKTDDGVEVLVHVGIDTVKMNGEGFDVKVKANEHVNAGDNLVVVDFDKVKEAGY STTTLMTVLNTVAFASVTPKTGVDVKAGESVIDIQR >gi|222441572|gb|ABXX02000001.1| GENE 248 291551 - 293227 2297 558 aa, chain + ## HITS:1 COG:MT3153 KEGG:ns NR:ns ## COG: MT3153 COG0033 # Protein_GI_number: 15842637 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Mycobacterium tuberculosis CDC1551 # 1 557 1 547 547 613 57.0 1e-175 MVANNAGMPATPADLINVDEVIGKYYDVVPDPNVPEQRVSFGTSGHRGSSLKTSFNEAHI VAITQAIAEYRKKAGVTGPLYIGRDTHALSEPAWKTAIEVLVANGVTVRIDSRDDFTPTP VVSQAILTHNRAADGTQRFTGEGLADGIVVTPSHNPPTDGGFKYDPVTGGPAPSDVTNAI ADRANELLGDFKNIKRVPFEQAVKSDLVERFDFREHYVADLENVIDFDVIRSSGVRLGID PLGGASVNYWPLMNEKFNLTIDVVRPQVDPTWSFMTIDHDGKIRMDPSSPYAMKGLVDSL NNGAWDKYDLVGGTDPDADRHGIVCPNWGVMNPNHYIAVCVEYLFGGNRPGWPEGAGIGK TLVSSSLIDRVAASIDAKLVEVPVGFKWFVDPLFKGEVAFGGEESSGMSFLRKDGRVWTT DKDGLIPDLLAAEITAKTGKNPAQLHQEQVDRFGESWYKRVDTPTTLEQKQKFAKLSGDD VAATQLAGEDITAKLTEAPGNHAKIGGLKVTTENNWFAARPSGTENIYKVYAESFESPEA LDKVLAEATEVVDKALAE >gi|222441572|gb|ABXX02000001.1| GENE 249 293497 - 294303 773 268 aa, chain + ## HITS:1 COG:BS_lytT KEGG:ns NR:ns ## COG: BS_lytT COG3279 # Protein_GI_number: 16079944 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Bacillus subtilis # 1 247 2 230 241 68 25.0 1e-11 MRIAIVEDHAAERQLMAVMCAEYFKRTRDIGVECVTFADAESFIESWKDARYDLLLLDCY LSDDETATHAATGLDIARTLRRQNDDCPIVFITSSTDFAVLGYEVQASGYLLKPLNHDAF HATMDRVAAQLDTKTPVTHLKKHQSTGNAQSSTDAAWQVAFGNPAITMDRRLIAYALSSA HYVEFTFADGTCAKIRTNFSDVEHRLTVFSNFYRTARGVLVNFDYVSGISNNEFVMKGGK HIPITKTAVTTTCRKYAEYTFTRMRMED >gi|222441572|gb|ABXX02000001.1| GENE 250 294306 - 295661 1100 451 aa, chain + ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 178 447 167 431 433 62 22.0 1e-09 MLDALASIAPSCMFFAIGEQLNALTGLLLCLYMTWHHMENPKRDGLILMISGVIVFFLCG IACCLAHVPSLWSVIPSAPVVVLALRKMTNLPWGQLLFVVSTAAYIVAIIYYLSLAVDLA VLNEQSMNLRVGWPGMISLLIFDLIAATTLFHPFHHSFSATFDSPSISRNFWRVIWLFPF ISTAIVVWCMPADNASLLDTRVLSIAFTVSIAYSGFMTMAYFLIWYMVQQADRLREASKR EHYEAMQTLQLQHMNERINEARQIKHNIRHHIQTLQALAAADDMPGITSYLEEMANHRLL QPIPMQYCEHASLNAVLVYYCDWIRHIGAEVDVKASVPQYLNINNAELCSMVGNLLENAS EAIMKQQDGEKKLRVRIKYRTGPPASLFIVVDNTHDSSIMQVGDAFASTKHGGEGLGTAT VRETAERHHGATSFDYDGTLFRASVMLCLDD >gi|222441572|gb|ABXX02000001.1| GENE 251 295743 - 296975 962 410 aa, chain + ## HITS:1 COG:NMB1618 KEGG:ns NR:ns ## COG: NMB1618 COG0328 # Protein_GI_number: 15677468 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Neisseria meningitidis MC58 # 2 147 4 137 145 106 41.0 8e-23 MTITVSTDGSALGNPNGPMGWGWADHELATGGKPGHHHDSDCDAGGATNGTNQIGELCAV LEALRAHPGSEPLVIETDSQYAINCSTTWVHGWKKNGWKNSQKKPVKNADLIRAIDAEIS KRPGPVKFVWVKGHAGNAGNEKVDELARTYAGDCRSKIREGYLPLEGWQSLLASEYSQGT DVPDDAQMLLDGKITTDEYHMGRGQGKSAQGSADDLMGAADPEPRPRSIADMLVEPEGYP APDEATLPLTSNEMSVESDDMPEPTTALDTTMPDGTTPDAEAPRKSYAEMLLKPDCFPHE HDERQPADDAQNEQSANSSENTPAPTSESAESANASAPTNAVADLPKLPHRASPSGLAVS GAIRFTPPPNSSPTFDGKPRLIRGYIAVEGYVQGDGTLVLDEAPFAVKHN >gi|222441572|gb|ABXX02000001.1| GENE 252 297144 - 297842 1134 232 aa, chain + ## HITS:1 COG:L0045 KEGG:ns NR:ns ## COG: L0045 COG0120 # Protein_GI_number: 15674215 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Lactococcus lactis # 7 227 2 222 224 241 55.0 1e-63 MDKAQQDALKKAAGIEAAKLIQNGMIAGLGTGSTVRFLVDELGRRVQEEGLEFTGVTTSR RTQEQAEGYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKKFESRGYKPVLRLDAEGQPVRTDENNYVV DLHLECIEHPEALADDLINTVGVVEHGLFLHMVDQVIVGDPNGPRVLTNSNK >gi|222441572|gb|ABXX02000001.1| GENE 253 298067 - 298156 148 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSVIKKRRKRMSKKKHRKLLRKTRHQRK >gi|222441572|gb|ABXX02000001.1| GENE 254 298370 - 298999 859 209 aa, chain - ## HITS:1 COG:no KEGG:BAD_0359 NR:ns ## KEGG: BAD_0359 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 209 4 217 217 242 74.0 9e-63 MSTTQTSSSHGKLIVAVIAAALVVVLALVSAFIWPGWALNKGDEASTQGTTTSQGASQDA SEPTTPSIDAVALPDDASELLKAMPDSVLNFARTKADASTSWSGASPVEEYTLTYSTGKD GQDITLKVAQWSQSDDAQSQYDNLTGAMTGKELGGGNVKVSGEATGAYSAKTDPDDETKA IAVWRNDTVVFQATGAKDSVQRFYQQFPL >gi|222441572|gb|ABXX02000001.1| GENE 255 299127 - 300545 1221 472 aa, chain + ## HITS:1 COG:SA0484 KEGG:ns NR:ns ## COG: SA0484 COG1066 # Protein_GI_number: 15926203 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Staphylococcus aureus N315 # 1 471 1 452 454 365 42.0 1e-101 MAKTSSQFVCSECGWNGPKWLGRCPECGQWGTIEEFHEARPAASKRTAAPGRTSRTQSHM VPASAAKPITEIGTENISRISTGFTEFNRILGGGIVPGSVTLIAGEPGIGKSTLLLETAG NVARLCAAQPERNTVLYISGEESQAQVRMRASRIGAVEPNLLLSATTDLSTVLGLIEQSK PALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDIPVLLVGHVTKDGSIAGP RTLEHLVDVVCQFEGDAETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEVTDPSGLFLSS SNSASSAPVEGTCVTFTLDGHRSLPIEVQSLVTKSVLPTPRRAANGVDANRIAMLVAVLY RHGNVNLLANDLYISTIAGGQAREPGCDLAIVGALASAAKSKAIGRTTCAIGEISLTGQV RPVPRLEYRLREAARLGFTTAVVPTLRREIAIPGLSIVQVDTLQDALGAMLR >gi|222441572|gb|ABXX02000001.1| GENE 256 300745 - 301971 1245 408 aa, chain - ## HITS:1 COG:Cgl1932 KEGG:ns NR:ns ## COG: Cgl1932 COG0196 # Protein_GI_number: 19553182 # Func_class: H Coenzyme transport and metabolism # Function: FAD synthase # Organism: Corynebacterium glutamicum # 25 408 17 327 341 139 31.0 1e-32 MKTITLTPDASGMVDWPTLSNDKKSVVTIGSFDGMHQGHQAVIRRVVELAKKEQSFSVVV LFDPRPALVHGYAAKNGGQEPPADMVDTQALTSMQERLRAIDKLGVDYTLIVHYTLAFAA KSYRFFLGQMVGKLGMRTLALGSDAAMGANRAGDVKAIENLALATGVFQLEVVDDRGPGE TRVPANAQPVMPTGHGEPTDPLEGASKAERRAWSKKNQAKPVRVWSSTNVRYLLGQGRIK DADAILGHPHAVEGIVVHGEERGRTIGFPTANLSDNVAGYLPVDGVYAGWLVDLGSKTAE SDHAEAASDGISQQFDSSSVDARLADHSPYRWPAAISIGTKPTFNEATGMNDRVVEAYAI TDDWLDLYDHQVRVEFTGFLRPQIKFDSAQDLIDELKRNVEETKRITA >gi|222441572|gb|ABXX02000001.1| GENE 257 302020 - 303084 863 354 aa, chain - ## HITS:1 COG:ML1546 KEGG:ns NR:ns ## COG: ML1546 COG0130 # Protein_GI_number: 15827813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Mycobacterium leprae # 9 248 13 221 320 206 51.0 6e-53 MTKKPEHSGLLVIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATR LLNYIVDHNKTYEATIRLGQRTTTDDAEGELLPGEWAASFPSRQAVEQLIAERFTGRIEQ VPNVYSAIKVNGQRAYDLAREGKDVELKARPVTIEEFNVRQVRYGYTHSDRAGAELVGAV VAEKASNGWIANIAPHEDMQPVMELDVTVTCSAGTYIRALARDLGEELGLGGHLTMLRRT RVGRFSVNMPNVMSAHAESKTFTDREGMEVTRNRAVLDDAEHALDHALDPVASAAASMSM LAVSEQEAADLRFGRRIAHDICTTTAAYVEETNDLVAILERAKRGEAKPVAVFN >gi|222441572|gb|ABXX02000001.1| GENE 258 303068 - 303571 714 167 aa, chain - ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 5 150 4 149 149 106 45.0 3e-23 MAGTNPRAARIAALIQRVIASSMEAQLHDKRLANVTITEVRVTNDLQIAKVYWTQLGREG HEQGERRRAQQALNQAKGRLRSLVGTKAGLRLTPQLEFVFDEVPGEAHEIEDILAIARKR DEELAKTRKTAQYAGEADPYKHPEEDDDDDFDDDDVEVEDWDDDEEA >gi|222441572|gb|ABXX02000001.1| GENE 259 303707 - 306547 3201 946 aa, chain - ## HITS:1 COG:MT2905 KEGG:ns NR:ns ## COG: MT2905 COG0532 # Protein_GI_number: 15842380 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium tuberculosis CDC1551 # 305 945 263 899 900 726 63.0 0 MPKARVYELAKELGVDSKTVLNKLEAMGEFVKSASSTVEPPVARKLRNAFVSNAQSNASE SKKPAAPAKKPAAPAASPTPAPRATPAAPAASAAKPAAPKPARPAASKSEAPKPGQRMPR PGDSRQHGNRANGNTPRPQGERRQGGKSAPVPGPRAQRNNTNAPQGGNGNNAANGAKPHT PGPRPGNNPFSRKQGMRTPTPGDIPRPHPMNRPSANNNGEGRRGGRPGQGGGQRGGFRGR PGQGTGAKPGQWGQHRSGQGGGQRPAGGGNRFGGGSNTNGGGFQGGNSAPGNGPARGGGR GRGGAAGAFGRQGGKSSKARKNRLAKRQEFQEMKAPVIGGVRIPTGNGQTVRLRQGASLA DLAEKINVNPAALVTVLFHLGEMATATQSLDESTFQILGEEIGWDIKIVSAEEEDKELLQ QFDIDLDEEELQEDEDLKPRPPVVTVMGHVDHGKTRLLDTIRRTNVIAREAGGITQRIGA YQVTVDLEGEPRKITFLDTPGHEAFTAMRARGAELTDVAILVVAADDGVMPQTVEAINHA QAANVPIVVAVNKIDKQGANPDKVRGQLTEYGLVPEEYGGSTMFVDISAKQGTNVDKLLE AVLLTADAELDLRANPDMDARGATVEARLDKGRGAVATVLVQSGTLHIGDSIVAGTSYGR VRAMLDENGNHMKEAAPSTPVQVLGLTSVPTAGDLFLVASDDRTARQIAEKRQATERAAQ LAKRRKVVSLESLKEQFAKSEVDMLNIVIKGDSSGSVEALEDSLMKIEVSDEVGIQVIHR GVGAITQNDVNLATVDKAVIIGFNVRPNRQVADLAEREGVEIKYYSIIYKAIEDIEASLK GMLKPEFEEVVTSHSEIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILRNGIATVNDLEI SSLRRFKDDVTSVKEGYEAGINLGSFNDIELGDIIETFEMQEIERK >gi|222441572|gb|ABXX02000001.1| GENE 260 306761 - 307813 553 350 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 11 339 17 358 537 217 37 6e-55 MELDLAGMHQLAAGQGIDPETLDAALSEALRLAYLKTPHAAKHARVELDPRAGSFTVWAQ DEIPVEPTEDNPHPAPTLGEEYDDTPRDFGRLAAATARQVISQLFRKAEDDKVFGAFSGQ KGKLITGIVQQDVKDTSNVHVAVGDVEALLPRREQVPGERYRHGERIRVYVVNVARGLKG PEIVVSRSHPELVRRLFEREVPELVSGAVSIMAIAREAGARTKIAVRANTEGVNPKGALI GPGGARVRAVMENLGPEKIDIVDWSADPAKFVAAALSPAVATGVQVISEKNQTAIAFIHD DQLSLAIGKEGQNARLAAKLTGWKIGIESAEAHAKKMAEAQASTSEETAE >gi|222441572|gb|ABXX02000001.1| GENE 261 307891 - 308775 563 294 aa, chain + ## HITS:1 COG:no KEGG:BAD_0352 NR:ns ## KEGG: BAD_0352 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 293 1 293 294 322 65.0 2e-86 MQTRSPLFPSVSSTSRRVCVLACIGVLVASLTACSAPRIAGRAEAELQPSPCEKAYADAT ANADIMADRSRHIIMRYLAAQEAVSDWANTAAYCPARFADGTLRSAQARHTARLMAARLT INIAQPTLSRCDGIDSFDIDADSLSAMSVAEDQAGFAMEVFAARSIGHATLDISDRHKTT SQRLISFSGAEDTRAKTYDVAQLLAHPDTIVDSATGLFAPTDAVIEMNCARSEIAAVESS SNSTSDSAQSRTTAENSSDDSRQQSLGILTSMIADRVDLALTWGYPSFDEALFE >gi|222441572|gb|ABXX02000001.1| GENE 262 309103 - 309240 180 45 aa, chain - ## HITS:1 COG:no KEGG:BDP_0461 NR:ns ## KEGG: BDP_0461 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 45 222 266 266 97 93.0 1e-19 MVDDNYITIAHGRNYRDCMLDIGIFSGCNVQQHQWVNASVHEQEL >gi|222441572|gb|ABXX02000001.1| GENE 263 309142 - 309390 110 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLHIATGENTDVEHAVTVITAVRDGDVVVVDHTVMCQIKPNPTLVMVHLHPSVRGTLST QQSGGITRGETNMAAHRSRNPD >gi|222441572|gb|ABXX02000001.1| GENE 264 309278 - 309487 79 69 aa, chain - ## HITS:1 COG:no KEGG:BLD_1737 NR:ns ## KEGG: BLD_1737 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 4 42 230 268 726 79 89.0 3e-14 MVCVSVFDYAGKRHRVGVVYRRLSDEYLDPFAFNPDSVIGVPPCWSHRVLYRRIVGWRGC HARLGGGVP >gi|222441572|gb|ABXX02000001.1| GENE 265 309571 - 310566 903 331 aa, chain - ## HITS:1 COG:MT3562 KEGG:ns NR:ns ## COG: MT3562 COG0101 # Protein_GI_number: 15843050 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 30 330 22 296 297 192 40.0 8e-49 MKRLGIERFPAFLLCVVMCCYAPFVMLIAVRLRIDLAYDGTDFYGWAKQPDIRTVQGEIE RVLHTILRVPEGDDNEPLRLTVAGRTDTGVHASHQVCHLDINEETLARCVGHMQVEPVMA LTRRLQRMLPNDIAIRSIKEAPEGFDARFSALERTYVYRIADRSSEIDPRTRNSVLHIDD NLDIGAMNKAAEMTIGLHDFGSFATPNPGGTTIREVKTAYWRRIPQHPLIDDGTTMGERY RTPALESGLLCFTIVADAFARNMVRSLVNGCVQVGIGKRSLDWFAGKMATPLREGSTGPI APQGLTLEHIEYPEDDQLAIRAEAIRAKRTL >gi|222441572|gb|ABXX02000001.1| GENE 266 310594 - 311076 709 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025366|ref|YP_909211.1| 50S ribosomal protein L17 [Bifidobacterium adolescentis ATCC 15703] # 1 160 1 155 155 277 93 5e-73 MPTPKKGPRLASSPAHERLMLANMATSLFQRGRITTTLPKAKRLRPLAERLITLAKRGDL HSRRRVMRVIRNKSVVHKLFTEIAEQMEQREGGYTRIVKIAPRRGDAAPAAIIELVTEPV SPKQAVVKEAEAATKVAAEEAPVVEEAPVEAPEATAENAE >gi|222441572|gb|ABXX02000001.1| GENE 267 311165 - 312163 1425 332 aa, chain - ## HITS:1 COG:MT3564 KEGG:ns NR:ns ## COG: MT3564 COG0202 # Protein_GI_number: 15843052 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 323 1 322 347 454 73.0 1e-128 MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGVP HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIAN PDMHIATLAEDGELEIEFTVERGRGYVPAQMNKQDNAEIGRIPVDSIYSPVLKVSYRVEA TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVA EETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKEK LQSLGLALKASPLGNFDTNNLEGGTFFSPEDE >gi|222441572|gb|ABXX02000001.1| GENE 268 312244 - 312642 667 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025364|ref|YP_909209.1| 30S ribosomal protein S11 [Bifidobacterium adolescentis ATCC 15703] # 1 132 1 132 132 261 100 4e-68 MAAQKQAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRK STPYAAGMAAESAARKAMEHGLKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQA HNGVRPPKRRRV >gi|222441572|gb|ABXX02000001.1| GENE 269 312727 - 313137 687 136 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703] # 1 136 1 136 136 269 99 2e-70 MQDLRKTEGIAMARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLT DEQLITLRDYLEGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNART RKGPKRTVAGKKKATK >gi|222441572|gb|ABXX02000001.1| GENE 270 313241 - 313354 200 37 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23466153|ref|NP_696756.1| 50S ribosomal protein L36 [Bifidobacterium longum NCC2705] # 1 37 1 37 37 81 100 5e-14 MKVSPSVKRICENCRVIRRHGRVMVICVNPRHKQRQG >gi|222441572|gb|ABXX02000001.1| GENE 271 313377 - 313595 285 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 114 76 7e-24 MAKDGVIEVEGQVVEALPNAMFRVELENKHIVLATISGKMRKNYIRILPQDRVVLEMSPY DLNRGRITYRYK >gi|222441572|gb|ABXX02000001.1| GENE 272 313594 - 313749 64 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351022|ref|ZP_03742045.1| ## NR: gi|225351022|ref|ZP_03742045.1| hypothetical protein BIFPSEUDO_02604 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02604 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 51 1 51 51 95 100.0 1e-18 MSLVPFFGDYYACPKTHQLARIHENGNYGTFGVSQFPFSIDLWYFIGLSYL >gi|222441572|gb|ABXX02000001.1| GENE 273 313783 - 314343 827 186 aa, chain - ## HITS:1 COG:XF0275 KEGG:ns NR:ns ## COG: XF0275 COG0563 # Protein_GI_number: 15836880 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Xylella fastidiosa 9a5c # 1 186 12 197 198 176 48.0 2e-44 MRLLIMGPQGVGKGTQAALLSEHYGIPAISTGDIFRYNIKNKTELGVEALKYIDKGELVP DELTNKIVKDRLAMDDAKNGWILDGYPRNASQVEALDAILADLNTPLDAVVALDADHDVL MERMKKRAEIEGRSDDTPEAIAKRLDVYAKETAPLLTTYEERGLLKTFNGVGSVEEIQST IVAELG >gi|222441572|gb|ABXX02000001.1| GENE 274 314452 - 315789 830 445 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 9 435 19 437 447 324 42 5e-87 MRTLIQALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYKVVQQCVGSMNSTSENFIGL VNLFSGGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYL TIGLAVLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELIT DKGLGQGMSILIFMSICSGFLPQLWEIGWGTKGTDGNWAKFAAVVGVLLVIMILVIYVEL SQRRIPVQYTRRMIGRKMYGGSSTYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSDQS WVKWINSNLANTTSVWYIALYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGIRAGS ATSRYLSYVMNRLNTVGAVYLLFVALIPTVLIMALDLNTKLPFGGTTILIIAGVGLDTLR QAKAQTEQFQYAGFLFEGTDHKEGK >gi|222441572|gb|ABXX02000001.1| GENE 275 316026 - 316472 727 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025358|ref|YP_909203.1| 50S ribosomal protein L15 [Bifidobacterium adolescentis ATCC 15703] # 1 148 1 148 148 284 95 4e-75 MADILQMHDLKPAPGAKKDRIRVGRGEGSKGKTSGRGDKGTKKRYQVRPGFEGGQLPLYM RLPKLRGFKSPFKKEYQVVNVAALAELFPQGGEITVADLVAKGAVRDGYPVKVLGDGEVS AAYTIKGVKASASAKSKIEAAGGSISED >gi|222441572|gb|ABXX02000001.1| GENE 276 316475 - 316660 294 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025357|ref|YP_909202.1| 50S ribosomal protein L30 [Bifidobacterium adolescentis ATCC 15703] # 1 61 1 61 61 117 95 7e-25 MMTNLNIKLHHGLVNSTPKQRAAAQTLGLNKIGKTVTREDTPALRGQLLVLRHLVTVEEA D >gi|222441572|gb|ABXX02000001.1| GENE 277 316657 - 317382 1177 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025356|ref|YP_909201.1| 30S ribosomal protein S5 [Bifidobacterium adolescentis ATCC 15703] # 1 241 1 241 241 457 97 1e-127 MSDNEKETQVAEETQNTQAAAEATNEDRKSRRGQRGEGRRGERRNRREESHENEMLDRVV TINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFTVPR VKGTVTHPVIGHDAAGTVLLRPAAPGTGVIAGGAVRAVMECAGITDVLTKSMGSATAVNV VRATVDALKKLEEPEEIAARRGMSLEEVAPDSLLRARAEGIAEARKAREEAQAKAAQKDG E >gi|222441572|gb|ABXX02000001.1| GENE 278 317379 - 317750 585 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025355|ref|YP_909200.1| 50S ribosomal protein L18 [Bifidobacterium adolescentis ATCC 15703] # 1 123 1 123 123 229 95 1e-58 MSVQIFGKGKKVALQRRHARLRKRISGTPELPRLVVTRSNRHMVAQIIDDTKGITLVSES TLMSDFAGFEGTKTEAAKKVGELIAKKAQDAGITAVVFDRGGNKYHGRVAAVAEGAREGG LAL >gi|222441572|gb|ABXX02000001.1| GENE 279 317750 - 318289 875 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025354|ref|YP_909199.1| 50S ribosomal protein L6 [Bifidobacterium adolescentis ATCC 15703] # 1 179 1 179 179 341 93 3e-92 MASHIGKLPVTIPAGVEVKIDGQSFTAKGAKGTDSYEIPEGITAQVEGNEIILVPADDLR PTRAKHGLARSIVASMVKGVHEGYAKTLDIVGTGYRAQAKGKGIEFSLGYSHTITVEPPE GIEFELPNPNQVIVKGIDKQAVGQCAANIRKLRAPEPYKGKGVKYSDERILRKAGKAGK >gi|222441572|gb|ABXX02000001.1| GENE 280 318307 - 318705 669 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025353|ref|YP_909198.1| 30S ribosomal protein S8 [Bifidobacterium adolescentis ATCC 15703] # 1 132 1 132 132 262 100 2e-68 MTMTDPIADMLTRLRNASAAKHETVDMPYSKFKANIAEILKREGYIKDFTAKEAKVGQTL EVTLKYGPNGERSIQGIKRISKPGLRRYAKSDALPMPLGGLGIAIISTSSGLLTQKECLD RGIGGEIVAFVW >gi|222441572|gb|ABXX02000001.1| GENE 281 318790 - 318975 331 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025352|ref|YP_909197.1| 30S ribosomal protein S14 [Bifidobacterium adolescentis ATCC 15703] # 1 61 1 61 61 132 100 3e-29 MAKTALKNKAAAKPKFKVRAYTRCQVCGRPHSVYRKFGLCRICLREKAHRGELPGVTKSS W >gi|222441572|gb|ABXX02000001.1| GENE 282 318977 - 319549 973 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025351|ref|YP_909196.1| 50S ribosomal protein L5 [Bifidobacterium adolescentis ATCC 15703] # 1 190 1 190 190 379 99 1e-103 MTDTTVEAPATPRLKQKYNEQIVPELEKEFHYSNPMQVARVQKVVVSMGVGAAARDSKLI EGAVKDLTLITGQKPKITKAKKSVAQFHLREGQAIGAYVTLRGERMWEFLDRLLTMALPR IRDFRGINGNQFDGQGNYNFGLTEQSMFHEIDPDSIDHQRGMDITVVTSTKDDKEARVLL KHLGFPFKEN >gi|222441572|gb|ABXX02000001.1| GENE 283 319546 - 319881 541 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025350|ref|YP_909195.1| 50S ribosomal protein L24 [Bifidobacterium adolescentis ATCC 15703] # 1 111 1 111 111 213 100 2e-53 MAAKIKSGDLVKVIRGKDRGKEGTVKQVLKDDRLIVEGVQIVKKHVRATQQGQQAGIVAV EAPIHRSNVMVIDPETKQPTRVRIVEKEEARDGKVKTVRVRVAKKSGKELA >gi|222441572|gb|ABXX02000001.1| GENE 284 319883 - 320251 604 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025349|ref|YP_909194.1| 50S ribosomal protein L14 [Bifidobacterium adolescentis ATCC 15703] # 1 122 1 122 122 237 100 8e-61 MIQQETRLHVADNTGAKELLAIRVLGGSKRRYAGIGDVIVASVKDAIPGGSVKKGDVVKA VVVRTVKEHRRVDGSYIKFDENAAVILGSGREPKGTRIFGPVGRELRDKRFMKIVSLAPE VI >gi|222441572|gb|ABXX02000001.1| GENE 285 320343 - 320603 438 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025348|ref|YP_909193.1| 30S ribosomal protein S17 [Bifidobacterium adolescentis ATCC 15703] # 1 86 1 86 86 173 100 1e-41 MAEERNFRKVRRGYVVSDKMDKTISVELEQRSTHPLYGKVVRSTRTVKVHDEHNEAHIGD LVSIMETRPLSKTKRWRLDSIIERAK >gi|222441572|gb|ABXX02000001.1| GENE 286 320603 - 320860 421 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025347|ref|YP_909192.1| 50S ribosomal protein L29 [Bifidobacterium adolescentis ATCC 15703] # 1 85 1 85 85 166 98 1e-39 MAVGTADYTMKNLNEKTNEEIEGFLKKSKEELFNLRFQSATGQLENTARLKAVKHDIARM YTVLRERELGISQAPEATETKAEEK >gi|222441572|gb|ABXX02000001.1| GENE 287 320860 - 321279 728 139 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025346|ref|YP_909191.1| 50S ribosomal protein L16 [Bifidobacterium adolescentis ATCC 15703] # 1 139 1 139 139 285 100 3e-75 MLIPKRTKYRKQHRPVRRGMSKGGNEIAFGDFGIQALAPAYVTNRQIEAARIAMTRYIKR GGRVWITIFPDRPLTKKPLGTRMGSGKGTPEFWIANVHPGRVMFEIGGVSEDVAREALRR AIDKLPMKCRVIAREGGDI >gi|222441572|gb|ABXX02000001.1| GENE 288 321288 - 322091 1330 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025345|ref|YP_909190.1| 30S ribosomal protein S3 [Bifidobacterium adolescentis ATCC 15703] # 1 267 1 267 267 516 98 1e-145 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYRDFVLEDDVIRKAMSKDLERAGVSRIV IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQSNNRQGRRGDRRPRRGQ RNAAPQQNAAAEAPAAAEAPAATETKE >gi|222441572|gb|ABXX02000001.1| GENE 289 322094 - 322453 582 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025344|ref|YP_909189.1| 50S ribosomal protein L22 [Bifidobacterium adolescentis ATCC 15703] # 1 119 1 119 119 228 100 3e-58 MEAKAIARHVRVTPRKARRMVDLIRGKKATEAITILKFAPQDASLPVRKVLESAIANARV KADKAGEPFRENDLVVKETYVDEGVTLKRFRARAQGRAARINKRTSHITVVVANKEGNR >gi|222441572|gb|ABXX02000001.1| GENE 290 322470 - 322748 493 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025343|ref|YP_909188.1| 30S ribosomal protein S19 [Bifidobacterium adolescentis ATCC 15703] # 1 92 1 92 92 194 100 6e-48 MTRSIKKGPFVDAHLQKKVDEQNEKGTHNVIKTWSRRSMITPDFIGHTFAVHDGRKHVPV FVTESMVGHKLGEFAPTKTFKGHVKDDKKARR >gi|222441572|gb|ABXX02000001.1| GENE 291 322764 - 323594 1439 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025342|ref|YP_909187.1| 50S ribosomal protein L2 [Bifidobacterium adolescentis ATCC 15703] # 1 276 1 276 276 558 99 1e-157 MAIRVYKPTTAGRRNASVSDFSELTRSTPEKSLVRKLSKTGGRNSYGRMTSRHRGGGHKR QYRLIDFKRWDKDGVPATVAHIEYDPNRSARIALLHYADGEKRYIIAPEGIKQGDVIETG AQADIKPGNNLPLRNIPTGTVVHAIELRPLGGAKIARSAGASVQLVAKDGAYAQLRMPSG EIRNVDARCRATVGEVGNSDHANIQLGKAGRARWMGKRPITRGESMNPVDHPHGGRTRGG KPPVSPWGKGEVRTRRPKKASNKMIVRRRPNGKNRK >gi|222441572|gb|ABXX02000001.1| GENE 292 323631 - 323927 471 98 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224283711|ref|ZP_03647033.1| 50S ribosomal protein L23 [Bifidobacterium bifidum NCIMB 41171] # 1 98 1 98 98 186 95 2e-45 MVAIHKPAHDIILKPVVSEKSYALSDRGQYTFVVAPNANKVQIKQAIEEIFNVKVTNVNT LNRAGKRQRTRNGFGQRVNQKRAIVTVAEGQTIDIFGN >gi|222441572|gb|ABXX02000001.1| GENE 293 323933 - 324598 1102 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025340|ref|YP_909185.1| 50S ribosomal protein L4 [Bifidobacterium adolescentis ATCC 15703] # 1 221 1 221 221 429 97 1e-118 MANVTLNVTDNQGNAAGTVEAPAEIFGFSAEEVQSRIPLIHQVVVAQRAAARQGTHATKT RGMVSGGGRKPWKQKGTGRARQGSIRAPQWYHGGTVFGPQPRDYSQRTPKKMKAAALKYV LSDRANAGRVAVVDFGVSEAPSTKAAVAALTPVTENKFTTVVLSRENVNEWLSVRNIPTV HPIFADQLNTYDVVTAQYVVFSKEGFDAFLAAKAEPAAKEA >gi|222441572|gb|ABXX02000001.1| GENE 294 324605 - 325246 1091 213 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703] # 1 213 1 213 213 424 99 1e-117 MSNRTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDP TKVTKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEPGQELTAELFPEGTLVDVTGTTKGKG FAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTTLNLTI VSSDVENGVLAIKGAIPGPKGSIVLVRSAVKGA >gi|222441572|gb|ABXX02000001.1| GENE 295 325264 - 325572 520 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154486746|ref|ZP_02028153.1| hypothetical protein BIFADO_00571 [Bifidobacterium adolescentis L2-32] # 1 102 1 102 102 204 100 4e-51 MAGQKIRIRLKSYDHEVIDQSAKKIVETVTNAGATVVGPVPLPTEKNVFVVIRSPHKYKD SREHFEMRTHKRLIDIVDPTPKAVDSLMHIDLPADVNIEIKL >gi|222441572|gb|ABXX02000001.1| GENE 296 326050 - 328779 3861 909 aa, chain - ## HITS:1 COG:SP2026_1 KEGG:ns NR:ns ## COG: SP2026_1 COG1012 # Protein_GI_number: 15901847 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 465 1 463 464 566 63.0 1e-161 MADAKKEEPTKPTPEEKLAAAEAEVDALVKKGLKALDDFEKLDQKQVDRIVAKASVAALN KHLVLAKMAVEETGRGLVEDKATKNIFACEHVTNYLAGQKTVGIIREDDVMGIDEIAEPV GVVAGVTPVTNPTSTAIFKSLIALKTRCPIIFGFHPGAQKCSVEAAKIVRDAAIAAGAPE NCIQWIEHPSIEATGALMKHDGIATILATGGPGMVKAAYSSGKPALGVGAGNAPAYVDKN VDIVRAANDLVLSKHFDYGMICATEQAIIADKEVYAPLIKELKRRKAYFVNDEEKAKLEQ YMFGCTAYSGQTPKLNSVVPGKSPQYIAKAAGFEIPEDATILAAECKEVGENEPLTMEKL APVQAVLKSDNKEQAFEMCEAMLKHGAGHTAAIHTNDQALVREYGQRMHACRIIWNSPSS LGGVGDIYNAIAPSLTLGCGSYGGNSVSGNVQAVNLLNIKRIARRNNNMQWFKIPAKTYF EPNAIKYLRDMYGIERAVIVCDKVMEQLGVVDKIIDQLRARSNRVTFRIIDYVEPEPSVE TVERGATMMREEFEPDTIIAVGGGSPMDASKIMWLLYEHPEISFSDVREKFFDIRKRAFK IPPLGKKAKLVCIPTSSGTGSEVTPFAVITDHKTGYKYPITDYALTPSVAIVDPVLARTQ PRKLASDAGFDALTHSFEAYVSVYANDFTDGMALHAAKLIWDNLAESVNGEPGEDKIKAQ EKMHNAATMAGMAFGSAFLGMCHGMAHTIGALCHVAHGRTNSILLPYVIRYNGSIPEEPT SWPKYNKYIAPERYQEIAKNLGVNPGKTPEEGVENLAKAVEDYRDNKLGMNKSFQECGVD EDYFWSILDQIGMRAYEDQCAPANPRIPQIEDMKDIAIAAYYGVSQAEGHKLRVQRQGEA ATEEASERA >gi|222441572|gb|ABXX02000001.1| GENE 297 328897 - 329079 170 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486743|ref|ZP_02028150.1| ## NR: gi|154486743|ref|ZP_02028150.1| hypothetical protein BIFADO_00568 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00568 [Bifidobacterium adolescentis L2-32] # 1 60 3 62 62 81 85.0 2e-14 MQYDVPLCRVAREMLSSVHLMFRLRSFMESKSLKNIILSVFVAFYHKSHTLSQVSPPYLL >gi|222441572|gb|ABXX02000001.1| GENE 298 329133 - 330104 568 323 aa, chain - ## HITS:1 COG:mlr4907 KEGG:ns NR:ns ## COG: mlr4907 COG2207 # Protein_GI_number: 13474103 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 32 321 13 300 305 167 30.0 3e-41 MGAVAQVNDNRHGKAALAQTSFGGFVPKGGSPNDSGVLEIIVPDAQASVRWAKHGYPSSL AKWHHHPHIEIHLIREGTGLMMAGNAVVPYEAGQVALIGSNLPHNWVSDIAPGERLRQRD VVCHVRPETMRLLMSGFPETSGFAMVLKRAGQALVLSGESARQAGSILENMEEHSLACRV SDLIRVLDVFAHAPADESYTVVASGYDPAVCSGAERVVNDAIEYISSHLSGEISMDLAAR QAGMSVSAFSRLFKRAAGIGFSDFVRRLRIGHACRLLTTTNQSVASIRRACGYGNASNFN RRFFEETGETPTGWRKKYIERTR >gi|222441572|gb|ABXX02000001.1| GENE 299 330144 - 331184 1219 346 aa, chain - ## HITS:1 COG:mlr4915 KEGG:ns NR:ns ## COG: mlr4915 COG1063 # Protein_GI_number: 13474107 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Mesorhizobium loti # 1 346 1 346 348 394 57.0 1e-109 MKAVVLEEQGVINVREVPDAPAPGLGELKIAPHTVGVCGSDLHYYTHGRVGKYVVEQPMI LGHEASGTVVEVGPGVEGFKVGDRVAMEPGIPDMSSRASKLGMYNVDPAVRFFATPPIDG CLCETVNHPAAFTYKLPDNVSFGEGALLEPLAVGMWSATKARIKPGDVCVVTGSGTVGML TASCALAGGASKVLISDVSAIKLAIAAQIPGIIPVDLTKEDLVERVREETGGWGADVAFE CSGSPKSYETFWKLIAPGGAAVIVGIPVNPVAIDITELQATEVRIENIFRYANVYQKAID LVANGKLNLKPFITDTYAMEDAQAAFDRMAEGRPGDIKLQITVKND >gi|222441572|gb|ABXX02000001.1| GENE 300 331258 - 332526 1083 422 aa, chain - ## HITS:1 COG:BS_csbX KEGG:ns NR:ns ## COG: BS_csbX COG0477 # Protein_GI_number: 16079828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 2 399 13 402 435 259 36.0 5e-69 MKIGLPRTLLAGLVAIAVFMTGDGFELTFLSKYIVDQGFSSSQSSLMFTMYGLMAALAGW ASGVLAEMFGAKRIMLIGASAWVVLHLLFVGVALPSGVYPLMLGVYALRGVGYPLFIYSF VVLMAQTIDTAKLASAMGWFWAAYSFGIGVFGAYLPSFTIPLVGEYYSLWLSLPFSIAGL LICLLMVPKSKGADTSSMSNADKLRELSRGVTILVHNRQIALAAVVRVICNLTLYGFPVI MPLYLATTNNGGGAWFKVSQWSQIWGFQFVVTIFGNVFWGRMGDSHGWMRQMRWFGCWFC VIGTLGMYYIPQFFGANMVLMCADAVVLGLGISAFVPMGAVFPALASEHKGAAISAHNLA SGLTTFFGPLIATVLISTIGFGGVCWTYAICYAIGSLVTLGIHPHQPGFDDRGHRITAVE RN >gi|222441572|gb|ABXX02000001.1| GENE 301 332744 - 333874 1016 376 aa, chain + ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 10 363 6 371 385 102 24.0 1e-21 MKAQSALSVKEANLKAMTAFIYTQGSATKQMFEHELGLSLPTITQNLRAMEADGLIVKGE MQQSTGGRKAQIYEFAAHSSVAIGVRIQTTQITAIAIDLNGKSVATRQRTLPYRNNDAYY QRMNGIINDFAQELAKQGSTVLGVAFCMQGIVSADGQSITFGKIMGNTGLKLSELSHGLN YPSLMIHDSDASAMAELWFDHNLKDAVCIYLERRPGGAVIVDGSLYQGPNQCNGSIEHMT LIPGGNPCYCGQLGCMDTYCSPETLMEDGESLPGFFSVLEQGEQEHRKRFSQWLDYVALA VTNIRSVLAGDVIISGEAAQYLDDDDMAGLRERVVEHTPFGTTDFTLRKGMALDHQDIIG AALRFVEPYVRELCDM >gi|222441572|gb|ABXX02000001.1| GENE 302 334043 - 334444 578 133 aa, chain - ## HITS:1 COG:no KEGG:BAD_0314 NR:ns ## KEGG: BAD_0314 # Name: ywbC # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 133 30 162 162 271 97.0 7e-72 MTKPMSEFTTDLQHSGMPAKDLDETIEFYTKKLGFELAGLFHNGENRCAFLRYGHLTIET WEGDPAPLTTGAINHWAFDTPDIEAAFENAKELGLNFKDTEIQHIDSFWEHGIRYFNVYG PNGETIEFCQIVK >gi|222441572|gb|ABXX02000001.1| GENE 303 334500 - 334760 62 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351054|ref|ZP_03742077.1| ## NR: gi|225351054|ref|ZP_03742077.1| hypothetical protein BIFPSEUDO_02636 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02636 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 86 1 86 86 165 100.0 1e-39 MRYAAMSAAHLPSYRDTFLLIPGCSGRINSVSTDFDDSLGSGGDFAVEEVLHLLEFKLTA GSDRHERRQPRHSKSTDNFKVFRMRL >gi|222441572|gb|ABXX02000001.1| GENE 304 334757 - 337204 2293 815 aa, chain + ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 85 736 51 687 836 466 40.0 1e-130 MKNPSLHRYATRPGLYFTDDGGADAIVRSETADQVWFCVLEPLDQPSAFYADAVRLFNEP GLTFIDQAMKQRICTRRIPSLNLRETLFRMDGPNYGLWYVHVPQAWDGMQYGYRVNGPWD PDHGVSFNPYKLLLDPYAKGIEGSMELDPGAFSYECEIVNGKVKGSPFGPMSTIDSVGHV PVSVAIDDRATNKHDGEPSHPHVAWSKTVIYELHVKGFTANAPWLPKELRGTYAGLAHPA TLSYLQDLGVTSIELLPIQAKQSELFLQERGRVNYWGYSTLGYFAPEASYATKRSQEAGA AAVRQEVIDMVRALHEAGFEVIMDVVYNHTCESGPEGPTVCWRGLDNLAYYRRTKDKISR LYDTTGCGNTLDFTNTHVTTFAVDSLRYWAKRIGIDGFRFDLAATLARLDGEFTRYHPFL YALRSDMLLGNLKMIMEPWDCGPNGWRTGEFGIPFAEWNDRFRDCTRKFWLTDVDRMRGG EYGEMTMQEMATRLCGSSDLFATDPGRGSTASVNYVACHDGFTTADLTMYKTKHNETNGE NNRDGTNDNHSVNFGHEGPSGDQIIVQQRQRATMNLLGTLLLSLGTPMLLAGDEFGNSQN GNNNAYTQDNDTTWLDWDWLYSTEQTPELKQFNLTSRLITLRKSRDLYNHEDFFTRLSEI GLLKKSDRVHWYLPNGQMPNDADWTNPSVRSFAMQLLSPDEPSLLILINGSDEVTRFHLP KDIEWEMVWSSSEIVGEYPGLGTSIERVSEFDEESESKPAGRLRNHLHRINMMYWQMKDD ADNLQSADDGLSEDDPTLWTLPALSISAMKQMPTI >gi|222441572|gb|ABXX02000001.1| GENE 305 337288 - 337779 806 163 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025328|ref|YP_909173.1| 30S ribosomal protein S9 [Bifidobacterium adolescentis ATCC 15703] # 1 163 1 163 163 315 98 3e-84 MAENTNNSAVLETEEELTSYTTETNAGAGTGTSAIAPGYGTGRRKEAVARVRLVPGTGKW TINGRTLEEYFPAKLLQREVNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALN AIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQFSKR >gi|222441572|gb|ABXX02000001.1| GENE 306 337800 - 338249 730 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025327|ref|YP_909172.1| 50S ribosomal protein L13 [Bifidobacterium adolescentis ATCC 15703] # 1 149 1 149 149 285 93 2e-75 MKTFTPKPADLTHDWYVIDATDVVLGRLASQAAILLRGKNKPTYAPHADSGNHVIILNAD KIALTGNKLGKELYMHSGRPGGLRRDSYGKLLKTNPERIIKSAIKGMLPKNRLAKVQLDR LHIICGTEHPYAGQKPQVFEIAQVSQQAK >gi|222441572|gb|ABXX02000001.1| GENE 307 338595 - 340757 2546 720 aa, chain - ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 9 720 2 715 724 508 41.0 1e-143 MTEQTENATRLARPIIRLAKLVGIATSYVGMSRDYHEIEDDVLVAVLKALGIDASNDGAI EQSITTIQRERDTRIVPPTVLHVVGKESKVEVHGGALDVPEASIMLEDGGAYAGKIELEG GSDTVVEVDGGFVCTSYLVLPADLPEGYHTLEVTVGGKTEIATVISAPEKIELLDDMKEG SLWGWMSQLYSIRSSGSWGIGDYEDLKTLLVESKKKTGADFMLINPLHAAEPVPPIEPSP YLPISRRFINFSYIRPESMPEYAVLSPEDKAKVDELHEQVKPLNGNARILDRETMWRTKM QALWIIYKSGLSAQRQAEFDQYLAEVGDEIESYATWCLCYDKWGASNGSDDDWVRKYNRD SEEVAQLRAQYPDTLEFYRWLEWVATEQLHAAQQAAREAGMKIGIVADMAVGVHPAGSDV WWNPERFAKGATVGAPPDMFNQQGQDWSQPPLNPIALEQTGYKVYRDMVHGMFSNAGAVR IDHILGLFRLWWIPEGKKAMDGTYVHYDSDIMLGILALEASRAGGVVVGEDLGVVPAYVS KSLSEHGILGCAVEWFEQFDGEFRAPKDWRPYALASVNTHDLPPAAGYLEYGHVKLREQL GLLSGPVEEFQKSTEAEHNAMLSMLVDEGYLDASALEDELANENEIIDALYRGLKGSPCK LMAASIVDAVGEKRTQNQPGTSNEYPNWRIPLADGDGNVVPLEQLFDNTRLQEIAAIMRG >gi|222441572|gb|ABXX02000001.1| GENE 308 340827 - 341534 728 235 aa, chain - ## HITS:1 COG:no KEGG:BDP_0417 NR:ns ## KEGG: BDP_0417 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 29 229 19 219 223 294 86.0 2e-78 MTEDMSSQDTTAVETAENTVETVVGNADEQASNQEVPSDFEPLTATYERLRHSTDAAELS EFARRPLPDRSEQAAFSRATALLEAVAGNAHTPLEDRVFLAETMPFPNILVKLSTDESVE VRKAVAGNANDKNWLVGRLTKDESLEVRDVALRNKQTSWKMRLEGAQDPGMDSTALDFLG SLGVDVEPNAPAVLASMVRRAVALNPNTSDQMLEKLAQDASGEVKRAAERHLSEK >gi|222441572|gb|ABXX02000001.1| GENE 309 341589 - 342227 623 212 aa, chain - ## HITS:1 COG:SP2209 KEGG:ns NR:ns ## COG: SP2209 COG1739 # Protein_GI_number: 15902016 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 19 204 17 200 211 124 38.0 1e-28 MQTILDSADQPAHDAFAEKKSEFIGDACHIDSLDEALAFVQTIRDQHPKARHVAYAAVCG GSDGRLAERMSDDGEPSGTAGKPILDVLRANEMTDCVVAVTRYFGGILLGSGGLIRAYST GASITVKAANKAKIVPCCEYQVTLDYPQLGSFQNLLASVDGEQADAQYTDRIVLSIIVPQ EQSQKFKSRIIETFNATVTPRQTGTSNRPVRY >gi|222441572|gb|ABXX02000001.1| GENE 310 342293 - 343279 1169 328 aa, chain - ## HITS:1 COG:MK0297 KEGG:ns NR:ns ## COG: MK0297 COG0111 # Protein_GI_number: 20093737 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanopyrus kandleri AV19 # 30 322 12 306 522 161 37.0 2e-39 MEIYETQPERTDLPLVVMPVIIESMIEPFEKNFELLKDIARVRMYKDFTLDEDTIVERCA EADVIMVIGFHCADSILDRLNAKCYAFGGTGVASYIDLDKAKERGIRVCNVVHYGDHAVA EHTIALLMELARQVGKLDRQVKTGDWDGADGYELYGKKLGIIGLGGIGQTVARIAGALGM NVSAWNSHVPEQVFADLNITPVNDMNELIAGSDVVSIHMPLLDSTKGIVTAENLEALKPG TMFINTARAEIIEPGALLARLQRGDIPAALDVFEHEPLTADDPLCSIPGIILTPHTAWRT DGAYVGITRQVVQSVAAFCKGEDFNVVV >gi|222441572|gb|ABXX02000001.1| GENE 311 343359 - 344723 1203 454 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 86 397 79 376 430 108 28.0 3e-23 MKYRKEAVHATNTEVLAAGRRRLAFAALAVLAVVLVAGIWLLVHSLQSKQRDADTKPATT VNEPKTVEKKQVTEPAEHHGNSPDCPDTDCIAMLVNGDLLFHEGLWNQYASANTAATDGT AFDFTGLFEPMRKYIEASDIAVCEFETPIAQRGGPYSAYPIFNIPPEVADAAKNVGYHAC THASNHSWDQGADGIARLWDTLEQDGIAQTGSYKTEKDSYEPLVIDSPTGGGKIGLVAGT VSLNAQTPDYDWRVDRLRESGDPNHQADIDKAVAKAKAAREQGADVVAMAMHSVQEYLDY ADSWQQDEAHELADTGAFDVIYGAGCHCAQPIENYNGTWIIYGLGNAVTESANTADTIVN NQGVTARIQFAGKKGVADSWRVNRIDWVPSANVTQGKYQWCSLASDHPDGPCWDETQDAN VRQRIWDVLYSMGADQNVVKEWNITAEQTSSSGQ >gi|222441572|gb|ABXX02000001.1| GENE 312 344791 - 346095 689 434 aa, chain - ## HITS:1 COG:lin2082 KEGG:ns NR:ns ## COG: lin2082 COG0389 # Protein_GI_number: 16801148 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 23 370 7 356 356 204 35.0 4e-52 MSTAPRIAAAKRDWGHDEAGCTVLHIDMDAFYASLEVARHPEYRGRPVIIGVGNRSVVSA ASYEARQYGINSAMASSRAQKLCPNGIFLPVDMSYYRAMSHRIFKEVLSRITGRIEQVSV DECYMDVSGALLRWGSPSAIGAWIREQVALRYNITCSVGIAANKLVAKMASTNAKPNGML MIPVARHAQFVQMMPLRGIPGIGPSLEKRLNAWGIDSVADLARMSLESLERATGSAISAH GLYQAARGLDDRPVVPYTQEKSIGAERTFEADTQDMRQVCSMLRWCCDDVATSLRKRGFL ARKVMVKLRFPDLSYATKGRTLDCPTDAASVLYPQCVDLLLAMMGMVPESVHAISLARPV RLAGMSTSGLVLAEETAIQPSLDDLLEENEAERHAAVQAKPAQMQTHAKRLRGAEAALDA VRQKYGNDIASFGV >gi|222441572|gb|ABXX02000001.1| GENE 313 346784 - 348235 1070 483 aa, chain - ## HITS:1 COG:STM1623 KEGG:ns NR:ns ## COG: STM1623 COG2272 # Protein_GI_number: 16764967 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Salmonella typhimurium LT2 # 9 297 13 278 502 212 44.0 2e-54 MKRQVIVSQGTVEGLAAEDQGITVFRGVPFAQPPVGGLRWRAPQPALPWDGVLQAFDFGP TAMQPTPGASDDFYDREWGTDPAVPMSEDCLYLNIWTPALRGYGADSMVASEKLPVMVWI YGGAYQCGGTFEKEFDGTHLAANGVVVVSVAYRLNAFGFMTHPLLHEEAVERGDGEPYAN FGFLDQRAGIQWVKENIAKFGGDPENITVFGQSAGAASVLAQICSPMNHGLFQKAIMQSG AGLGYFNARQDTLEHAQANGIRLFEALGVSTLEQARAIPARTVLEAAESLPVPPDSGRED DWSMIVNWVPCVDGLFLPDQEERIVGGCKANNVDMLVGNTTNEFIASTEDGKPVHVGQLG NLTLIRKWTASGGTAPYYYHFDVAMPGDDAGAFHSSDLWFSFGSLAKCWRPFVGWHYDLA RRMGLYWTNFAANGDPNGTDRDGTPLPVWDPCIGEECPAMHLCQEPGMRTDWLTETDRKA FGL >gi|222441572|gb|ABXX02000001.1| GENE 314 348232 - 349821 820 529 aa, chain - ## HITS:1 COG:CAP0114 KEGG:ns NR:ns ## COG: CAP0114 COG3507 # Protein_GI_number: 15004817 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Clostridium acetobutylicum # 4 521 41 530 531 234 32.0 5e-61 MMITSTNPMVYTDFPDPDIIRVGDVYYMATTTMHFTPGCDILRSYDLVHWEFIAHALNIV ADTPEERLECEGANAYGRGMWAPSLRYHRGTWYVLFAANDTHTSYLLTADDPCGPWRKRE LDGFYYDSGLFFDDDDRAYVVHGQSTLRITELNPELSGPMPGGLDRVIVQDDPQADLGYE GSHLYKHDGRYYVFTCHFPQGKGKTEACLMAESLDGAFEVREIIEDDLSFHGYGVAQGGM VDTPDGDWYAFMMQDRGGVGRVPILMPMRFGEDGFPVVGENGKVPQSVSVPAASCAEPVT PINGSEFIARYNAEGGVDANCLQPYWQFNHISHNEYWSLTERPGAFRLHSGRISSNLNHA WNTLTQRTMGPVTVAEVTVDASTLHDGDFAGLAAFQGCYSYIALTRRNGRTMLTVQYKPV NDDSIFSDDDWDSPAVTDAEIMADADCMRLRAVYDFTDCKDEVTFFYRDADTPESEWCPL GTAHRMVFKMDHFTGCRIGLFLYSTKETGGIADFYDFAYSTPDTKEREQ >gi|222441572|gb|ABXX02000001.1| GENE 315 349818 - 350957 1143 379 aa, chain - ## HITS:1 COG:BH2105 KEGG:ns NR:ns ## COG: BH2105 COG3405 # Protein_GI_number: 15614668 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Bacillus halodurans # 14 377 16 377 388 384 56.0 1e-106 MTNATDTNKTLGESMFAQCGYAQDAIDKRVSQVWHEIFEGPNKFYWENDEGLAYVMDTGN NDVRTEGMSYAMMIALQYDRKDVFDKLWGWVMRHMYMKDGHHAHYFAWSVAPDGTPNSNG PAPDGEEYFAMDLFLASRRWGDGEDIYEYSAWGREILRYCVHKGERYDGEPMWNPDNKLI KFIPETEWSDPSYHLPHFYEVFAEEADEEDRPFWHEAAAASRRYLQAACDERTGMNAEYA DYDGKPHVDESNHWHFYSDAYRTAANIGLDAAWNGPQEVLCDRVAALQRFFLTHDRTSVY AIDGTAVDEVVLHPVGFLAATAQGALAAVHSAQPDAEHNAREWVRMLWNTPMRTGTRRYY DNFLYAFAMLALSGKYRYE >gi|222441572|gb|ABXX02000001.1| GENE 316 350959 - 353001 1549 680 aa, chain - ## HITS:1 COG:no KEGG:BAD_0299 NR:ns ## KEGG: BAD_0299 # Name: not_defined # Def: putative outer membrane protein # Organism: B.adolescentis # Pathway: not_defined # 1 680 1 680 680 1414 98.0 0 MKFEYHVKPTGSDAACGDAEHPFATISKAAQMASPGDTVIVHEGVYREQVDPRRGGLSEH ERITYCGAEGEARPVIKGSECVQGWTELADHPHVWTVMLDNTMFGDFNPFATPIFGDWLE MPKFGKDPDKHLGDVYLNGVSFFESTTLEGVYDPQPRDTDEDFALKIPCPVPDVDRTRYV WHAEVDENAGTTTIWANFQGADPNEELVEVSVRRTCFFPSRNHVNYITVRGFEMAQATGD WAPPTSQQWGMIGPNWSYGWIIEDNVLHDAKFSAVSLGKEISSGDNEWAKTERKTGYQYQ LEAVFKARRIGWEKGLIGGHIVRNNDIYECGQNAIVGHMGSAFCRIEHNHVHHIALKREF FGWEVAGIKFHAALDTVIANNNIHDCSLGMWMDWQTQGTRITRNVFHDNVRDLMIEVSHG PYLVDNNVFASPVMFQNWSQGGAFVNNLICGGIEPHTVPDRSTPYHYPHTTEVAGCAVVS GGDERWLNNMFAPQPVKPTVGEYGLSAYSDCPMSMHEYLERQRGMWADSSQGGDERNPLQ SLYAGGNIYLSGAQGLNKQEGTADDSERMQEDAPFFGGTASTSVACDEPMPVTLVEEPDG LYLQCTVPQAVADTRMQVVTSDMLGVPRIVEERYEQPDGSDYVLDTDLLGQALTTTERKA GSLNGLVSGENHIRIWEWNN >gi|222441572|gb|ABXX02000001.1| GENE 317 353030 - 353140 65 36 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212716636|ref|ZP_03324764.1| ## NR: gi|212716636|ref|ZP_03324764.1| hypothetical protein BIFCAT_01566 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_01566 [Bifidobacterium catenulatum DSM 16992] # 1 35 1 35 40 65 97.0 1e-09 MLAMPKIFDDGCVLQSGQDVPAWGWCEPWRSVTVTA >gi|222441572|gb|ABXX02000001.1| GENE 318 353258 - 354889 1602 543 aa, chain - ## HITS:1 COG:L0234 KEGG:ns NR:ns ## COG: L0234 COG3507 # Protein_GI_number: 15673487 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Lactococcus lactis # 3 541 4 541 559 829 74.0 0 MQIANPVLPGFNADPSMIRVGDTYYIANSTFEWFPGVRLHESKDMVHWNLLPSPLSRTSQ LDMRGNPSSGGIWAPDLSYADGKFWLIYTDVKVVNGAFKDCTNYLVTAESIHGPWSEPIR VNGVGFDASLFHDDDGRKYLVQQTWDFREYHHGFDGITLTEFDVKTMKLKPETERTIWRG TDVKLTEGPHLYKINGYYYLFAAEGGTVYTHQEVVARSKSLDALSFEGMPSNPFITNFDT PRSYLQKQGHGALVDTPSGEWYYASLCGRPWHHDNESFTDPRGWCTLGRETSIQKVEWTE DGWPYIVGGHGGQRYVDAPKDAIETEAPADHSQHDDFMSDTLDLNWNTLRVPFDGEMGKV GGGVLELRGQGSLCNLFDLSLVARRWQAFNFDATVKVEFDPKNYRQMAGLTNYYDDLCWS WVFVTWDERRQCRVIEVAQNDFNNYTSFLRDTAPAVPDDVKSVWLRTKVRKQWYSYEYSF DGTSWVDLGVKLDAKILSDDYILRRYGGFFTGAFVGLAAVDLSGYDRVAKFSEFDYRELP DNE >gi|222441572|gb|ABXX02000001.1| GENE 319 354976 - 355797 198 273 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 4 261 12 250 312 80 25 9e-14 MSVLKLEHVKKDFTLRNGLKTTTIHAVKDASFELASDKTIALVGESGSGKSTIARMITCL ETPTSGSITLDGKPVPTHGKDLYEYRHNVQMVFQDPFASLNPYHTIFHHILRPLMINHMA NSQEEYEQKVIELLERVELTPAVNFMYRRPHELSGGQRQRVAIARALAPKPKVLIADEPV SMLDVSLRLGVLNLLSRIQQEEHIGMLYITHDLATARHFSDEIMVMCHGDIIEHGPSDDV ILNPQQDYTKVLLNAAPDPEKHFAKIRDERSRQ >gi|222441572|gb|ABXX02000001.1| GENE 320 355809 - 356660 190 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 25 251 144 352 398 77 29 8e-13 MATQNSDILLSVDNLDVIYDTDNPVHAVQNATFELRRGEMLGLAGESGCGKSTLAYSINQ MLKAPGKINSGSVIFHDKSGKDIDIRALSGRSLREYRWEKTSMVFQGAMNSLSPVTKIGK QLADIYKTHRPQMAKSERQDRCAHLLEMVHVDPNRLAAYPFELSGGMRQRVMIAMALALE PQLIIMDEPTTALDVVVQREIIEEISELRRDKGFSVIFITHDLPMLLEITDKIAVMKDGV IVEQGVSEDVYFNPKHPYTQRLLSSFPSLTGDRGSFVRVPRHA >gi|222441572|gb|ABXX02000001.1| GENE 321 356666 - 357595 709 309 aa, chain - ## HITS:1 COG:VC0618 KEGG:ns NR:ns ## COG: VC0618 COG1173 # Protein_GI_number: 15640638 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Vibrio cholerae # 73 298 82 307 341 202 43.0 7e-52 MSATNSSAAVARSQAKRRRSALDSLKRVLPERSAKLTAGLTIVIAMVLFAIIVPIFTKDP NKINDIGLSAPSAQHWLGTTQSGQDVFTQLGYSVRGSLIIGFAVGLIATALSFIFGVLGT YIGGIWDDLFSLITNIMLVIPGLPLTIVISALMPSKGTMMLVIVISITAWAGGARVLRAQ TLSMRGRDYVLAAKIAGERPWRVITVEILPNLLPVMGSQFVFSVIMAILSESSLSFIGLG STQSFSLGTMLYYAQNGSALNTGAWWWFLPPGLMIAIIGAGLSFINFSIDEVINPRLRKP TKKSKGRKG >gi|222441572|gb|ABXX02000001.1| GENE 322 357604 - 358596 236 330 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 68 328 40 314 320 95 26 4e-18 MRFYLKKIGFYLVALFAALTLNFAIPRLMPGDPVSAVLTRLASRGGTVAPETREAITAML GQDGGNIFQQYIGYLKNIFTGNWGVSVTYFPNQVTTSIASALPWTICLVGTTTIISFFVQ QALGIWAGWRRGGAFDNIISPVSTIFQAVPYFWLALIFIWVFARTLHWFPQSGGYNYREV VPGFTWEFFSSAVQYAILPALTILVSSLGMGVVGMRNMMVSTLSEDYIVTAEAKGLSPKR VMMCYAARNAVLPSISGFGTSIGAVVGGSLLTEQVFSYPGVGQMLLQAVTSNDYALMQGI FLIITVTVLVVNFIIDLLYGIIDPRTRQQD >gi|222441572|gb|ABXX02000001.1| GENE 323 358683 - 360371 1811 562 aa, chain - ## HITS:1 COG:PAB0627 KEGG:ns NR:ns ## COG: PAB0627 COG0747 # Protein_GI_number: 14521143 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pyrococcus abyssi # 52 548 56 557 644 185 30.0 2e-46 MRSRTWKRVLAAVCAGVAAVSMAACGGGTNNTAKDGVIINSVMNSTSQASLNYNPFSSTA LTGVVGALYEPLFYMNNLKDDPTKLEPLMGKSYTISDDAKTIDVTIRDGEKWSDGEPYTT EDVAYTFNLLNSNKALNTSGFAGSAKVLSDTEVRITLDKPESVNALSYLSGTMIVPKHVW EKIDDPVTYTNKDAVGSGPFTVKGGNFSPTAYTFKKNPYYWDEGKPEIDGVRYVLITGGT QASQNALTAGDVDWMSAIFPNMDDVLSGYPDIKTVNVPSSQLAFMTCSNKELGCSGPTTD PAVRKAIYYALDRNQINKLALNGQYSELAGSLYPYGQFTKYASDDVPDSPIPGKGRTDEA VKVLEDAGYTKGDDGIYQKDGVKLSIKVAVMSDVSDWINAINVASQQLKKIGIDLHADQM SSNEWTQAMQQGQFEMSIYGLWVAGAEPWMFYNQFYSTASTAAVGKSAWPNYARYSNKTV DDALNAINTTTDVATKKSEYEKIQTQVFEDMPYIPILRQSGLSEMWSDKVTGWPTDDNVY ANPQTWANPDLGIVLKNLKVKK >gi|222441572|gb|ABXX02000001.1| GENE 324 360732 - 361886 922 384 aa, chain - ## HITS:1 COG:ML1488 KEGG:ns NR:ns ## COG: ML1488 COG0436 # Protein_GI_number: 15827783 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium leprae # 10 383 14 367 367 227 38.0 4e-59 MGFHEFSSPYDWSRIAAYKRTAKAAFGGMIDLSVGSPVDPVPDSVRKALAAAANDPNAYG YPATAGTADLRTAIAEWFSATRNVDLQAIHADVVPTVGSKEGVALMASLLHFGEDDVVVQ PKVSYPTYEIGTQLAGAKVLKVDDVADVASWRNVPGVKAVWVNSPCNPTGEVYSAERMAG IVAAAREIGAVVLSDECYALMQWRGAVNGAEGEADSLASTPCALCDDVCLGSAEGVLVLY SLSKQSNMAGYRTAFIAGDESLIASMSAYRKQIGQIIPGPVQAAMAAGLRDLESVKVQHA RYRERLSVLVSALRAYGYCTDMPDGALYVWVRAKSGDCWTDMEQLAKIGIIASPGEFYGA PECLRFSATASDEAIASAAERLAR >gi|222441572|gb|ABXX02000001.1| GENE 325 361966 - 362286 500 106 aa, chain - ## HITS:1 COG:Cgl2895 KEGG:ns NR:ns ## COG: Cgl2895 COG1146 # Protein_GI_number: 19554145 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Corynebacterium glutamicum # 1 106 1 106 107 134 66.0 5e-32 MPYVVAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD LPDEWAWYKDAAVSFFAEVGDMGGASAAGPIGKDPEQVAALPPQNQ >gi|222441572|gb|ABXX02000001.1| GENE 326 362323 - 363813 1852 496 aa, chain - ## HITS:1 COG:MT3351 KEGG:ns NR:ns ## COG: MT3351 COG0531 # Protein_GI_number: 15842842 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mycobacterium tuberculosis CDC1551 # 5 488 6 483 495 388 47.0 1e-107 MNVLRKKSVEQTLAETEESGHSLKRDLTWWDLAIMGVAVAVGAGIFSIGAQAAAFHAGPA VIISFLIAGVVCGAAVMCYAEFASMIPVAGSAYTFTYTTVGEIVAWVIGWDLILEMLMAG SVVSKYWGVYLNDFFRLVGWNINTNVTIGSFNFDFAPIIVVAFFTALLVCGTKIGARVDG ALTILKIAIVLFVVIVGFFYVKAENFTPFIPPSEPATATGSGLAATMEQPLWQWATGMTP SIYGIAGIISGAALVFFAFLGFDVVATTSEETVNPKKNVPLGIGVGMGLIIVLYTLVAIV TTGMVSYKDLAKQKDPSLATAFEMVGADWAAKIISFGIVIGLATVVMVLLLGLTRVVFAM SRDGLLPRSLSHTGKHGTPVRLQIAVGVVMALIAASCNVSILADMVNIGTLSAFTLVSIS IPIMRKKRPDLKRVFKIPGNPWVPIIIALANIWLMLNLSVLTWIRFVVWLAVGFCIYFGY GYRHARLGTGELEVGN >gi|222441572|gb|ABXX02000001.1| GENE 327 363844 - 365043 1142 399 aa, chain - ## HITS:1 COG:MT0500 KEGG:ns NR:ns ## COG: MT0500 COG0812 # Protein_GI_number: 15839872 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 4 398 21 369 369 197 37.0 3e-50 MTNFADLTTIAVGGPIASFIEPTSRVGVIEAVEDADAKGLPLCVIGGGSNMLVADTPFDG VVVRDARHAVSVLDEAAPAENDEKIVHVNAEAGCNWDDFVDYCVGLGLEGVEGLSGIPGT VGASVVQNIGAYGQEVASSVESVEVWDRKDKQTKELTNQELHFGYRMSALKASMYSAPAT PAADFFPTPRYVVLSVTFALHHSATGVVGYGQLAKALGVEVGERMSTTDIRNAVLNVRAS KGMLEDSHRYLTEAMRGTKKSELVAIAHNAQRTQAGNDEPDYNRHSCGSFFMNPILTKEQ AAKLPEDAPRFSATLPDGTPGVKTSAAWLIDHAGFHKGYKTSENATAGLSTMHTLALTNR GGASAADIVNLAKTVQDGVERAYDIRLVPEPVVIGMSLK >gi|222441572|gb|ABXX02000001.1| GENE 328 365152 - 365322 300 56 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025311|ref|YP_909156.1| 50S ribosomal protein L33 [Bifidobacterium adolescentis ATCC 15703] # 1 56 1 56 56 120 100 1e-25 MASKSADIRPGITLACTECKERNYITTKNRRNTPDRLELKKFCSRCGKQTVHRETR >gi|222441572|gb|ABXX02000001.1| GENE 329 366012 - 366305 605 97 aa, chain - ## HITS:1 COG:MT3527 KEGG:ns NR:ns ## COG: MT3527 COG0234 # Protein_GI_number: 15843014 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Mycobacterium tuberculosis CDC1551 # 3 96 4 98 100 120 66.0 8e-28 MSISLTPLEDKIIVKQAEAETQTASGLFIPDNAKEKPQQGEVLAVGPGRRNDAGERIPVD VKVGDKVLYSKYGGTEVHYQGEDYLIVSARDILAILG >gi|222441572|gb|ABXX02000001.1| GENE 330 366268 - 366450 119 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILSSNGVSEIDTVDLLFLREIVTYRAGTRLQEADDHLRRRPSALRHILARLLALCQLEC >gi|222441572|gb|ABXX02000001.1| GENE 331 366559 - 367761 1091 400 aa, chain - ## HITS:1 COG:no KEGG:BAD_0291 NR:ns ## KEGG: BAD_0291 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 400 1 398 398 372 67.0 1e-101 MGYESLSTVVVLAIVIILMAFWLPKRTVKGMKRVIEHREDRFSPSLHLVDADSGTRFSDE TAAKAKGAIMQSNETHEGKLTDERIAHVRAFRRAAIRRRRIIVVSMLVITIVVLMCAFVL HFSPLFALIPASLLAGVLALGVRAAKQAAAWERKVAKYRSKMRKRAAAERKRAQEEQAER SRLREQELEEIRRIAESQVPTDVMPEGEIRQAIDRGKVDRDAAVSKRKETPEAKTDTEVN VVDAQVVPSETNGLSIHDERDEIAKTENVDARDDMSSPTVVNASQDLISFSLGTPRNGDD IVQAAPESMEIKSTRQVAKAVPSTASTVSDNVEPLIVPTDAISSMDSDEAAARVEAGVHL RDVDAVGFHDAEVSADVEAPSVTSDSLGVGLASIMARRGA >gi|222441572|gb|ABXX02000001.1| GENE 332 367861 - 368484 376 207 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227427635|ref|ZP_03910696.1| acetyltransferase, ribosomal protein N-acetylase [Xylanimonas cellulosilytica DSM 15894] # 24 203 12 190 198 149 40 2e-34 MMRSESNAIDVPRFIQSHGLHVPIILRPLTFDDCDEWNDIRWRNDDWLKPWESGDPLHGA SMSFNEWVRAMRRNERNGTGVVFAIEQHGRIIGQISLGAICYGAMRTGVVGYWIDERCAG RGYAPMAVALLADWAMFDPSGPQLHRMEIDLLPENERSRKVALKVGACYEGVRTSYMFVN GQWRDHESYALLPECAPNGFTARLMDE >gi|222441572|gb|ABXX02000001.1| GENE 333 368459 - 369241 349 260 aa, chain + ## HITS:1 COG:ML0181 KEGG:ns NR:ns ## COG: ML0181 COG0212 # Protein_GI_number: 15826993 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Mycobacterium leprae # 65 253 6 187 197 77 32.0 2e-14 MALDSERIMPRKDCKIVTLSFCHAHNTFVFAQPSRGTTCDMTQNMQTDVAGDSTRDETAT QRELKRQWRKNAIARRKRTSPEERMKAGQKLAEQARQANLIHSFTTVAAFASMGSEMSMT PMLQALFDSNCRVLVPRLGEGMDIGWSELDSVHDLRDQTNSDGSTNTHRPQEPSNSVCGP EALKNAGLIIVPAFAVDHEGFRLGRGGGWYDRALEYRAVGSRVVAVCWPWEPTDKPVPHE AHDIPVDGVLTPDGFTEVRQ >gi|222441572|gb|ABXX02000001.1| GENE 334 369339 - 369521 196 60 aa, chain + ## HITS:1 COG:no KEGG:BDP_0401 NR:ns ## KEGG: BDP_0401 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 60 1 60 60 105 93.0 4e-22 MPTYHYRCKNCNYDFTEQQSFTDDPITICPECGEEQVRKVYSAPPIEFKGSGFYRTDKSK >gi|222441572|gb|ABXX02000001.1| GENE 335 369768 - 370349 377 193 aa, chain + ## HITS:1 COG:no KEGG:BAD_0288 NR:ns ## KEGG: BAD_0288 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 192 54 266 266 167 48.0 3e-40 MHRLLAAVCAGLAMFAALQCVRLTISTQPVVIAAQPIAKGSVITADSLALRDLPYDKALR NVFHDCADAVGLIAQVDVAEGGIVTSTMARASPVVSEGYTVIEVRLASSADNLSLGDVVT LSSATIFGEATPETSPDTDAVTLRELCSGAILTAKPSRDADGNTLAVFAMPPHEAATVLQ AQENSAIIAIVSS >gi|222441572|gb|ABXX02000001.1| GENE 336 370378 - 370647 185 89 aa, chain - ## HITS:1 COG:no KEGG:BDP_0399 NR:ns ## KEGG: BDP_0399 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 88 1 89 90 119 78.0 3e-26 MSVDEHSPQESSQETDQPAVRVVSGYCATRRTARRHKRVIRQGTELFDADGVKLEPSDVL TERQRNADDDKRILGELPPHWGVFSERGR >gi|222441572|gb|ABXX02000001.1| GENE 337 370644 - 374264 3854 1206 aa, chain - ## HITS:1 COG:no KEGG:BAD_0287 NR:ns ## KEGG: BAD_0287 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 1204 5 1208 1210 2122 88.0 0 MSESKENVTELDRIRGWREKYRLGLSPSPLEDVTQLSAQLDMTHAHPSGIAQLFASGHVQ LNSLFRDNGMLRAAGRRVERVLDDREAKSRVSGVGELSLVVGVAIWKGNQMPVLMYPVEV RKEGRNIENGTVIAFTGRVRLNAAFAAVLRENNVILDEAKLFDGSNYESGTPETSAVFAA ITDRAANAFPDFEIERHIILGCFMDPASQMLVESQKIIDQLAQGPTGNTALDALAGDKAA AEALEGAEIPEYSPFDADPHGEYEVGDIDNTVRYASQLASAGHSLFVDSSIANNTAEQAA AIASRCVMNGRSVLYVPCVTDQKRRFVQAVAANEMSGQLLDIADDGANAAIDRQLIAAVG FQSGVASSRFDQISDELVGVRSRLTRYLGDLHGVSQEWGVSAYQTIQNLAQIAALPTHPT THVRLSKQTAHSIADKIEDWAAKLQRAGELGEYTITENDTAWYKASLYSEEEAVSAYQRV VELLRKVLPATREQVASTVQTCGFPIPTTAQEWGRQVMVLKNLRRVLDVFQPEIFERDIA SMIEATKPKAERKAEGSSMGFWERRRHIKEAKGMLRVGAQVENLHEALLVVSKQADQWHM FVPHGGWPVLPTKLDDIIETQENLNRDMTALNAVLATTPQGGNLETIDFNQVEERLKALY DDKQALDNLPERARLERDFHSVGLDELIEDLNNRGIPNDAVAGELQLAWWTTAFEDIVKS SAIISNQDGSALQGAAERFAQVDVEHVRSIGPMVAQESMRRLCDMLFSRTQEANLLHTML AGSHNVSLNRLHKEHPQILAAAKPILVATPATLAAITDPAPLADVVIIDAAAHIQSIELL SIISRAKQVVVIAHRETVTSDGLKRLIALLPSVKIANRPVRRAPKLNAFLESEGYGSVPF DVAREGAQGEIAYHFVPDANGVPVITSGLVESSQQEIDEVVRLITKRAAGFTIVPASYML TVVTLTHTFRTRLGAELKAIANKNKAMGMFLRHVRIVDISDVAGAHATDAILAMCYAKTS HGRLLQQFGALESEGGRGMLLDALAVPDRHLDIVSAFSSSDMDDERLHQAGPKMLKTVLR WMEQLDDSVVRPAVKMTGSNVLLNDLADRIRARGLNVAVDYGFDNGSKLPLVVGLNDKPF ALAVLTDDAQFMGLQSTRERHRVLLQNIESLGWSVMTVWSVGAFVNPDKEVDRIVARLSD LYQEVK >gi|222441572|gb|ABXX02000001.1| GENE 338 374273 - 375682 1332 469 aa, chain - ## HITS:1 COG:no KEGG:BAD_0286 NR:ns ## KEGG: BAD_0286 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 469 1 501 501 457 59.0 1e-127 MSEDQRTAQQWTVKVDGTELKKLDSGESVEIGRKPLRPLVDDGFARLDIMDANKSMSKRH AIFSVDAQGNASVRDLKSTNGSFVVADNGQLMRLPADEDFQLPTTPMTLQFGDVRVTFER DIAQTVPETESHASASVSNLFSYAVSDEVPQEPDAVDMSVDDILNLRAGEPTALFNARNV ANRVNFMQLAERQSFAPVRSNEPDYGDLPSVSLVQHNVVADNTPRDLFADAVAEQQAAEE AAKKNAAENEHEANQPESVQEVALPTQTATGNETEHDTIPVSKLFSAHPSKPIIVALPAE DNNMSEQQTEASHEQSNEIGEQSATIVEQTNDETPSQEETALQQADDERFRPHATQSQVA SEPSPDETSAFKPVFEPGSVFDRVSKGELVKQEQTIEVDGLTSDDAKRTDDFTVQFEMAR HPELLPFLAMNPSLYDDLYAWLGALGNTDIDAALSHNPGYTEYRKAVGK >gi|222441572|gb|ABXX02000001.1| GENE 339 375946 - 376326 565 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213693116|ref|YP_002323702.1| ribosomal protein L7/L12 [Bifidobacterium longum subsp. infantis ATCC 15697] # 1 126 1 126 126 222 93 3e-56 MAKYTNDELLEAFGEMTLVELSEFVKAFEEKFDVEAAAPAAVAVAAPGAAAPAEEEKDEF DVILSAVGDKKIQVIKAVRAITSLGLAEAKALVDGAPKAVLEKAKKEDAEKAKSQLEEAG ATVELK >gi|222441572|gb|ABXX02000001.1| GENE 340 376437 - 376958 840 173 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025302|ref|YP_909147.1| 50S ribosomal protein L10 [Bifidobacterium adolescentis ATCC 15703] # 1 173 1 173 173 328 97 3e-88 MKRPEKEAVIAQLTDKFRDADAIYLTEYRGLTVPQISELREKLGRDTSYTVAKNTLIRIA AKEAGVEGLDEILAGPTAVTFVKGDFIEAAKTLRDFAKTNKALIIKGGFADGTVYDAEGA KKLADLKSRPQLLAEFAGDIKATMSKAAYLFNALPTKAVRTIDALREKQEKAA >gi|222441572|gb|ABXX02000001.1| GENE 341 377359 - 378747 2177 462 aa, chain + ## HITS:1 COG:SP0287 KEGG:ns NR:ns ## COG: SP0287 COG2252 # Protein_GI_number: 15900221 # Func_class: R General function prediction only # Function: Permeases # Organism: Streptococcus pneumoniae TIGR4 # 1 461 19 490 490 437 53.0 1e-122 MEKFFHLKENGTTVSTEVMAGLTTFFAMSYIIIVNPQILSQTGMPWGGVFLATIIAAIAG TLVMGLFANVPYAQAAGMGLNAFFTYTVCFGLGFTWQQTLCMVFLCGLINILITVTKIRK IIIQAIPEVLQNAIGGGIGLFVAYVGFLNVGFFTFTTKADAKNGDTVQATPGLAVMNNPT IWLFIIGLFLAIILTVLKVRGGMLIAIAVTAVAGIPMGQTTMANSLSIGDTFAQLPQTFG AIFSAEGFPSLFSDMSKLPIILLTIFAFSMSDTFDTIGTFIGTGRRTGIFSAEDEQALEN GSGFSSKMDKALFADSIATSIGAICGTSNTTTYVESSAGIAAGGRTGLTSVVVAICFALS AFLSPVISAIPSAATAGVLVVVGCMMASSLKEIDWGDISEAVPAFFASVFMAFSYSISYG IAGGFITYCLIKTCKGKAKEVHPVIWVVSLLFILDFIITAIL >gi|222441572|gb|ABXX02000001.1| GENE 342 378886 - 379779 902 297 aa, chain - ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 46 279 111 348 511 115 29.0 1e-25 MHRITRIAIAALASVGMLASVAACGSGQSTSEKNGTIEVVASVNQWGTVAKTLGGDNVNV TSIINSTNVDAHDYEPTTSDIAKLQKAQVIIVNGAGYDAWAVKAAQTANATIVNAAEVGG VNDGENPHVWFSAEVRKAVAQAITKAYEQVDAAKKNDFDKMNDQWTAEENNVESKIAEVR QKTDGLAYAATESVASYLAEDMGLTDATPSGYARATANESEPTPTDIKQFTDALKAGEIK LLVVNTQEESELTGKITDAAKSVEVPMVELTEQMPEQYDSLTAWMEGLVDAFSQAIA >gi|222441572|gb|ABXX02000001.1| GENE 343 380279 - 381058 193 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 214 1 207 223 79 29 3e-13 MGQRIDVNHLNIYYGDFLAVEDVNINIEANKVTAFIGPSGCGKSTVLRTLDRMHEIIPGA HCEGEVLLEGKNLYDKDIDPVAVRRDVGMVFQRANPFPTMSIRENVLAGVKLNNRKISKS DADDLVEWALRGANLWNEVKDRLDNPGIGLSGGQQQRLCIARAVAVHPQVLLMDEPCSAL DPISTLAVEDLINELKNDYTIVIVTHNMQQAARIADYTAFFNLKAVGQPGHLEYFTDTTT MFNNPQNEEAERYVSGRFG >gi|222441572|gb|ABXX02000001.1| GENE 344 381100 - 382095 1232 331 aa, chain - ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 5 328 3 306 307 198 41.0 1e-50 MTAVNNNASPMDGAPVIDFDKFKPTRSFTAARKRKDLAMRVLIALAFIVALIPLFSVLLT TIVNGVKRLNLNFLSYNMTGVVGGNPTPSGGYGGIQHAIIGTLEITFGAMVISIPIGLMC AVYLVEYSNRGKLARVITLLVDVMSGIPSIVAGLFAFSMFTILIGPGTINGFEGSVALSL LMLPTVVKSSEEMLKIVPHDLREASYALGVTKQRTITKIVLRTALPGIVSGAILAVARVI GETAPLLMTAGYIASTNVNLFSGQMTTLPVYVYQEYSKLNANCPASADASCVTTIPMERA WAAALVLILIVLILNLIGRLVAKIFAVKSER >gi|222441572|gb|ABXX02000001.1| GENE 345 382095 - 383048 1446 317 aa, chain - ## HITS:1 COG:Cgl2520 KEGG:ns NR:ns ## COG: Cgl2520 COG0573 # Protein_GI_number: 19553770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 2 315 29 354 355 204 42.0 1e-52 MSSQSKTAQQPVSGKNADKVFKGVAYACGILILVVLAAVALFLLFRAWPLIGGDQQANSE TISNFTGGKASSFWGYVGPLLFGTVLISALALLISFFVSVGIALFISHYAPKKLATALSY VVDLLAAIPSVIYGLWGGLVLVPAIYPFWNWVAKYLGWIPLFAGPAANPSRTVATVGVVL AVMILPIITSMSRDIFLQTPRLQEEAALALGATRWEMVKLAVLPFGKSGVVSASMLGLGR ALGETMAVLMILSPGLNYSIKLLQASQNQTIAANIAAQYPEANDLGVSVLIGTGLVLFLI TFVVNFIARKLTEKASA >gi|222441572|gb|ABXX02000001.1| GENE 346 383261 - 384037 933 258 aa, chain - ## HITS:1 COG:Cgl2521 KEGG:ns NR:ns ## COG: Cgl2521 COG0226 # Protein_GI_number: 19553771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 37 256 159 375 375 130 38.0 2e-30 MRFRQRLRHPGLRLPDRSGLQPQRYLWQGQDPEHGADTIAKIFDGKITKWNDDAIKQQNP KVDLPDLDITVVHRSDKSGTTKNFLSYVKDAAGDAWGYELGENWPNEVGQGAKGTSGVIS TVQQADGTIGYADASQAGELGTVAVKVGDNYVPFSAEAAAKVVDASPLDESATGDNRVVV KLDHNTTEAGAYPIVLVSYDIACPAYKDANTAKFVKSWLTYVVSDEGQQTAASAAGSAPL SDTMRQKVLKSIDAIETK >gi|222441572|gb|ABXX02000001.1| GENE 347 383782 - 384390 426 202 aa, chain - ## HITS:1 COG:Cgl2521 KEGG:ns NR:ns ## COG: Cgl2521 COG0226 # Protein_GI_number: 19553771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 47 153 55 157 375 70 35.0 2e-12 MRNSILVRSIAAVSGIVMLASVAACGDNTASNTDSSASTDTKTTETVSGNFSGAGASSQQ AAVEAWIAGFQGTNPDAKVAYNPSGSGAGVSTFLTGATAWAGSDAALSNDEVEQSKSVCA SGNAFDIPVYVSPIAVVFNLNGISGKGKTLNMEPTPSPRSSTARSPSGTMTPSSSRTRRL TCLISTSPWCTAPTSPAPPRTS >gi|222441572|gb|ABXX02000001.1| GENE 348 384712 - 385416 1010 234 aa, chain - ## HITS:1 COG:Cgl0399 KEGG:ns NR:ns ## COG: Cgl0399 COG0745 # Protein_GI_number: 19551649 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 231 1 232 232 270 62.0 2e-72 MTRILIVEDEESYREPLVYQLTREGYDVSAAATGEEGLELFTKGGIDLVLLDLMLPGLDG TALCRRIREQSRVPIIMLTAKSAEIDKVVGLEIGADDYITKPYSFRELLARVRAVLRRNQ MVADATESSDDDIPLICGDISMKIGQHEVMVRGENVFFPLKEFELLEYLMQNKGRVMTRH QLIDRIWGSDYVGDTKTLDVHVKRVRSKIEEDPAHPKYLTTVRGLGYKIDVPAE >gi|222441572|gb|ABXX02000001.1| GENE 349 385499 - 386863 1308 454 aa, chain - ## HITS:1 COG:Cgl0398 KEGG:ns NR:ns ## COG: Cgl0398 COG0642 # Protein_GI_number: 19551648 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 169 441 108 363 386 209 42.0 1e-53 MTLEHVAMAMAIAMAMAIVVVAVVAFLLGRVRGVRLEEDEIDSNDPSLFGAQKNMSLFGP HVPVQPTERQLIAVMPEALIVVDSLASVKYVSPGAQRFGIVEDHAMTLAEIRDILRLVST DSVVRERELSIPLDRAARAAAKNTDGKGIEAGKFRPSDTLYLHVRVGQISDDLFAIFISD MSEQRRFEIMRRDFVTNVSHELKTPAGAISLLAETIGDAADDPDMVKYFAGRVSKESERL TELVHRLIDLQKAQSAAAVLNAERLSVLALAREAIVENQVNAESKHISMVLSLNGKQKLV HVEGAENAVDRDDVFINADHETIKTAVKNLVENAINYSPEHTTVAVGVGSGDGKVSIRVV DQGIGIPESSLDRIFERFYRVDPARSRETGGTGLGLAITKHCVQDCGGTIAVWSREGEGS TFTITLPQAKSEQDEESAKSETAEISESAQLPIE >gi|222441572|gb|ABXX02000001.1| GENE 350 387046 - 387753 1024 235 aa, chain - ## HITS:1 COG:VC2379 KEGG:ns NR:ns ## COG: VC2379 COG0775 # Protein_GI_number: 15642376 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Vibrio cholerae # 4 235 3 226 231 107 34.0 3e-23 MSTIAIIGAMDEEVANIASALSDITVTEEAGVSVTRGTIETNKDTRVNVAATVGGMGTVN IAATTQHLIDADQPDAVIFSGIAGNLNTHLHINDVVLGGTLRYLDTDMRLVGQWKPGTAD QPVEEFHSDDRLIEVADKVLTDLNVHHITGIIATGNYFVDGPKKVEQVIRETGADAVEME GAAVAHIAARNDLPVLVIRALSDNADTDYVEFKEFDISEYADTAAKIAVNIVKRM >gi|222441572|gb|ABXX02000001.1| GENE 351 387814 - 388998 1189 394 aa, chain - ## HITS:1 COG:mll4988 KEGG:ns NR:ns ## COG: mll4988 COG0722 # Protein_GI_number: 13474165 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Mesorhizobium loti # 46 392 9 349 363 352 54.0 7e-97 MQQQLNTPEELRAIRQAMDEGKNPLVVTDVPRWEDQVGISRIVNRRVLEFEVLPTPAQVL GDLPLSDQAQEIVAYSRDEIRACLYGQDDRLLVIVGPCSVHDPAAALDYARRLAALKDEL GGELLIVMRVYFEKPRTTVGWKGLINDPDIDGSCNIKKGLLLARRTLLGVLDAGLAAATE FLEPTSPQYISDAVSWGAVGARNTESQVHRQLASGMSMPIGFKNATDGSIKAPTDSCFAS AQQHTFFGVDHMGRAAVVKTLGNPDCHVVLRGSSSGPNYDAESVANAMKLIREKMPAESA AAHGLIVDCSHGNSGKDEHRQAEVVRNIASRIADGEEGITGIMMESFIEGGSQKPAPLAE LTYGQSITDKCLSWQTTEQLLRELAQAVGKRRWK >gi|222441572|gb|ABXX02000001.1| GENE 352 389145 - 390278 1234 377 aa, chain - ## HITS:1 COG:mll4988 KEGG:ns NR:ns ## COG: mll4988 COG0722 # Protein_GI_number: 13474165 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Mesorhizobium loti # 24 373 5 349 363 358 52.0 1e-98 MSGLRGPDSSRDAQLLDDAVFPETVDVNIRQLDPIPAPRYFLKEIPLTDEMSDLVLKSRQ EIRDVLNGKDDRLLAIVGPCSIHDPKAAHEYAEKLAAVKKELEDRLVIVMRVYFEKPRTT IGWKGLINDPDLDGQFNIRKGMWLARKVLADVLGLGLPAATEWLDPITPQYICDLISWGA IGARNTESQVHRELASGMSMPIGFKNATDGSVKPAADSCFAAAFEHHFLSINLDGRVISA ETKGNPDCHLVLRGSSHGPNYDTESVAKALADLKVSKASGPSEHGIVIDAAHGNCGKNEV REAEVVENIASRIATGEQGISGIMMESFLKAGNQKPAPLDQLEYGKSITDACVPWERTEQ LLHTLAEAVESRRKLAE >gi|222441572|gb|ABXX02000001.1| GENE 353 390455 - 391795 1779 446 aa, chain - ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 7 446 3 443 450 294 36.0 2e-79 MTDITPLSADALATLVEDFEASDHNRMAMNAVTAAGVNKVARNYDRARLMQRRFSTIVDN GTATHQDRSGRCWLFSSLNVARFVAKKNMGLKEFEFSQNYAMYYDKLERVNYFLQDVAEL VKAGEPSDSRLIQHLLADVMGDGGQWTMAMNVYKKYGAVPKDLFPETESSKNTGEMNVQL RRLLHTAVAHMYADPTSIESVIAEATAAGHRILTIHLGEPPKSFDWEWTDKDGEFHRDGE ITPVEFWQKYVGSADLESYVCLVDDPRQEHVKGKKIGIEHLGNVAGGDPTEYLNVPNQFM KDCVRQILEEQGIPVWFGADCHPMMDRENGAWATDLFEYGKVYGVDFDLNKEDRVRFADS AMNHAMAFVGVDVAEDGTTTRRWRVENSWGDKIADKGYFTMSDDWFTEYVYEVAVPKALL PAEYQAALDEPATMLPAWDPMGALAD >gi|222441572|gb|ABXX02000001.1| GENE 354 391788 - 393266 2149 492 aa, chain - ## HITS:1 COG:no KEGG:BAD_0271 NR:ns ## KEGG: BAD_0271 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 468 1 467 477 372 79.0 1e-101 MVEQFPIVLRGYDKERVDEAFASAQETVDRLREQVKADDQTILELQAQLQEEKNKKANPN SFASLGANAQQMLASAEQTSAELLDRAKKDASAARATVQLQAETLLNNAKLDAKRILDEA KAKAEAVLSKANNDAGTLKSNAQREADQLRGEAQKAVVAQRQTVDLELTNSREEHDKRLA SERATQERELSDMRAEATEQIAAQRKNANDEINRMKSETNDQIESALAEANKKLADVREQ VSKMMTDAQRRASEITDTAKAKAQEITDEAEVHRTKTISQVNAEVEQIRADISAQQDEAT KKVNELLADLNERRETAKKQSDELISEAQHTRDEAEAYASDRREAADKQAASILKQATEE ADEQINERREAAKSELEGVQQRIADLQTREAQITQRVSELRAMFANAFSGFGANGLSVVN SIDGEQHESAAEAETPAESHDESGETVAGEPEVTFDEDVVSDEQQNNDDFEEPSEDEQSD QGEEAQEEQNND >gi|222441572|gb|ABXX02000001.1| GENE 355 393415 - 394104 755 229 aa, chain - ## HITS:1 COG:BS_pcp KEGG:ns NR:ns ## COG: BS_pcp COG2039 # Protein_GI_number: 16077334 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Bacillus subtilis # 6 191 5 175 215 115 36.0 8e-26 MQQINIVISGFTPYDGIDVNPAVLVPEALAEYWNDPSQSVALSDDLLQDVSISVTTVALP VSFANAWPMLLDAIEQTNPDIVIATGLKRSARGVLLERCATNLMDAAKPDADNVIPPRRP INPEGPAAYWTRLPLRSILRDFAKHEIPAALSSDAGTFVCNSLFYHLLDWSAAQEKRILS GFVSLPIVNEQPHPQHGLSIAQQIAAGNDVIRESVRYYLQPSSSEILLG >gi|222441572|gb|ABXX02000001.1| GENE 356 394146 - 394955 285 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 7 250 3 234 234 114 33 7e-24 MQEQKMPVVAVVLAAGFGTRFDENNPKQLVSVGDKPIVCWSIEAFERNDRVSDIIVVVNE RVSNMVNMLIDEAGYTKVRAVIPGGSERVDSTRAALDLLKQAGIPDGAKILIHDSVRPFV EQQSIDGCIDSLDQFNAATVAYASTDTILLTEDLGERKVVRSVPDRTNAFRAQTPQAFRF GTITKAYELATADPDFHPTDDTRVVVDYLPNEPVAIVAGSETNLKITTQADMPIAENIAR SLDPEHAKQEAKARMHAVFAEAFSQMHKH >gi|222441572|gb|ABXX02000001.1| GENE 357 395061 - 396077 1239 338 aa, chain - ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 38 256 11 208 246 130 36.0 3e-30 MTDRQYDDAILDSNAIAPTDVDGNPIPVTIPIMLAPGVKVVYTTRLGGTSEGDYAHCNLG GKTGDDPNHVLANRVALSNAIDAKLSLVSQVHSGVAVDVDELFVMNRPFGFDVSGSKDET AQQVGEAADNPAVVEADGQVTAQKNVALGMFAADCLPVLMADAEAGVIGAAHCGRRGLQS GVIGATVEKMVAKGAKPERIVATLGPCICGDCYEVGGDIADEFDAQFPGTFTLSRFGQPG IDIAAAALQELAKAGVPADNIVSSRARVNAATQYLSEDEELAEICQSDGEGEPQLTERFK KIRRSLCTLENPLWFSHRRATIAGKAHEGRMLALIVRE >gi|222441572|gb|ABXX02000001.1| GENE 358 396161 - 397699 1745 512 aa, chain - ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 5 277 2 274 406 330 51.0 3e-90 MQRRNKPEVLAPAGNLRGLKTAVDYGADAVYCGGKAFGMRSAPKNLSLEDFEEGSRYAHE RGARVYVTCNVLPRNNEVEAMREYIGQLKDTGVDALIVSDIGVMLMAREVAPNLELHVST QAGVTNYQAANAFYQLGARRVVLAREMDLQAVRDIRARIPDDLDIECFVHGAMCMAFSGR CLFSNYLTGRDGNHGECAQPCRWKYSIVEEKRPGQYFPIEQTKEGAYLFNSQDMNMLAHI DDLLDSGATSLKIEGRSKSAYYIAAMTNAYKTAVDAYMVQRGFEDEDGTVLKPFHDRVIR PSDPDYGKPETTDSIMEHADGAFAGKPDIAAVPVASAGEPDDLSYHARSTRRKSNTAAEI LPEGWYHAGVRPAEHVSLPDWLLDEPDKVAHRDYSTGFYYPEHKVQQSTDRSAYFRAWLV VGEVLSWSPEDGGRVTIMSRNKIEAGQEVEFVLPGAAPLAYTVPAGGFRDADGHWVEAIN NPAHVFSMPCPQEVPVNAAIRSRTKKPTLKAE >gi|222441572|gb|ABXX02000001.1| GENE 359 397862 - 398725 1154 287 aa, chain - ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 13 286 14 284 284 173 37.0 3e-43 MALFRNLGPFRTTAIGHGEMPLTIENNRGHDVGIETLHASLDAGCRHIDTAWAYYTPGEE EQTGEKLVREALDSWKGPREEVTVATKVGLRRAWEGDKPVWPRDGKPEHLIEYGKQSAMA LGVDSIDLLYLHRHDPEVPYNESCEGIKALLDQGVAQWAGVSNVSIEQLKIAQEILGDKL VAVQNQYSPIHLDTQDTLDYCAEQGLAFVCWSPLGGYRHPYDEHLFDPFREVAEARGVSY QRVVLAWELAKGDHMFVIPGAHRPETILDSLKADELELTEEELAKLG >gi|222441572|gb|ABXX02000001.1| GENE 360 398833 - 401046 1890 737 aa, chain - ## HITS:1 COG:no KEGG:BDP_0369 NR:ns ## KEGG: BDP_0369 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 40 706 38 729 763 688 51.0 0 MAAKQHASRAVRSFGIAIVVTVGIVAALLLFMASDDGGADLSYKTLDYDVQVQSNGDLKV TQHIDMKLADRSDDDVDHPWKQLYQQYTLKESDLTNITDISVRNATTGEAYQQGDIAIPS SYSTDEWDREHAKQWYIADVSQGDSNPQPFDPAKDGLVSGNTDDRSKKIEIGWNIPSITS ASSLKFDVTMTMQGVTTAYQDMATFQWEPFGVSNQIPIGKVTGTVTFPEGIDADNSWAWL HTECTSETERDKNGSLKFTVYDVRAGDYVDVVAMFDVGVTGGVQRTRDTTIKNGIMKSEA KQEQQWRDQQRKQARIRLITWIAIAVVGLVLCVIAIIFGLRSFNRSQYHGGVEYWRDEPE MSPASAAELLHMVDNKHSSTLTSRKMSASVLSLASRGAIAIYPGPAAMYRGIDMSQANNA DIARMIANDPARTRDVGKTSTVVILPVVFDNVQSLQLRPSEQAALDLLVTASERIGSPVF DLDQMNENFSDWENGYKLQEKFTNTCDNEFAMLGATSICGGGAFAAGICAVMLAFLSMLY FGAIGNLALFAVISAPMMFASVFALSYLRLKGLTDNGQYLAGQVLGLKHYMEDFSEFKDR GVTDMTLWGRYMVYATAFGISEKAMKQLLKAYPQLADPHWLDNNASDSLLYWSYRSWYFD HRYADPASFDTNSMDFSQFSANFGDIGAQLESGFADIQSTISAASPSGSFSGSGGSFSGG GFGGSSGGSGGGSFGGR >gi|222441572|gb|ABXX02000001.1| GENE 361 401158 - 401718 834 186 aa, chain - ## HITS:1 COG:MA2664 KEGG:ns NR:ns ## COG: MA2664 COG1704 # Protein_GI_number: 20091487 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 22 186 21 182 182 166 53.0 2e-41 MGVGIIIAVIVVLIVLWAVSAYNGLVTLRNRVKNGWAQIDVQLKQRTDLIPNLVETVKGY AAHESQVFTQVTQARAGVVQAAQSGDVAQRIAAENQLSRALMNLQVVSENYPQLQANTNF MDLQSQLKSLEEKIAYARQFYNDVVQKYNTQTEVVPTNIIAGLFHFEQAPYFQVDEADRQ VPQVKF >gi|222441572|gb|ABXX02000001.1| GENE 362 401897 - 404560 1441 887 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 18 737 11 698 714 559 46 1e-158 MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV ICEAQAELKNIAAKETKEFQLFPEYTEDLYNRIDEIAHADLDEALSIAEKLPRQDRIHEI KEGVKATLAGEFTDMDDAEKEKEIGNAFKELQRQIVRRRILTQDYRIDGRGLRDIRTLSA EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE TGRVGSPKRREIGHGALAEKALVPVMPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS LLAAGVPLKAPVAGIAMGLVSGDVDGQHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL QLDTKLDGIPADILASALQQAKEARTTILEVINECIDGPAEMSPYAPRIITTTVPVDKIG EVIGPKGKMINQIQEETGAEIAIEDDGTVFISSEGGDGAEKAKQIIDQIANPHVPEAGET YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD DRGKISLAIPGFEDQESSAPRRERFDRDDRRGSRGRRDDRRSDRDDRDYDDRPRRRRSDR DDDRDYDDRPRRRRSDRDDRDYDRDDRRSDRDDRDYDDRPRRRRSDRDDRDYDRDDRRSD RRRSSRRDDRNPRYAADENYDEYRADREERSERPRRRVRRDFDPFED >gi|222441572|gb|ABXX02000001.1| GENE 363 404789 - 405058 449 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025277|ref|YP_909122.1| 30S ribosomal protein S15 [Bifidobacterium adolescentis ATCC 15703] # 1 89 1 89 89 177 98 7e-43 MALTAEEKQEIIKTYATHEGDTGSPEVQVALLTKRIADLTEHLKEHKHDHHSRRGLLLMV GDRRRMLDYLKRVDINRYRSLIERLGLRR >gi|222441572|gb|ABXX02000001.1| GENE 364 405191 - 405865 825 224 aa, chain - ## HITS:1 COG:no KEGG:BDP_0365 NR:ns ## KEGG: BDP_0365 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 224 5 228 228 332 83.0 8e-90 MAQTQGNKVTEVVDGVIEQVDVSKHPTASIEASDLSLADIERRKSHPGHWALFIALVLVA LIAPYWWGRVIAVKDAAWMVANLSFLDPKGVALISWTVTIMAMAGLGLMVADVKKWLWGT VFVVGLAAEQFVAGVCLLSFNFWNATYVMYGDSSGLANAANLGIIAAGCGVAVYAVLWVG LLVCIKKESKFNVLTRSWASFLLFFVIESISLAVVLFGGLLNVV >gi|222441572|gb|ABXX02000001.1| GENE 365 405791 - 406048 77 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGNVDLFDHAVDDFRHLVALRLCHTRSVVLRLPPAATVTPLSRHVQHTQSSKQSHGRYA KGVPLSTPFFFSNDCVERMTGIEPA >gi|222441572|gb|ABXX02000001.1| GENE 366 406179 - 407996 2307 605 aa, chain - ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 5 573 18 595 644 407 40.0 1e-113 MARSKSDKAFDERVAQYSEELRELLTDLYGEQADEAFRNLTELMAKAHDARPADLKRLDT KRLADPEWYKRGNMFGMTMYTDLFAGDLKKLAGKVPYLKEQKLTYLHLMPLLKMPHPQND GGYAVEDFDTVDPSLGTNEDLAALTKKLRAAGISLCLDFVMNHTASSHRWAKAAQAGDPK YQDYYYCYDDRTIPDQYDAVVPEVFPATAPGNFTWNEQMHKWVLTSFYPFQWDLNYRNPN VLVSVLSSVLGLANLGVEVFRIDAVPYIWKELGTNCRNLPQVHTIVRMLRIVLECVCPAV VLKGEVVMAPKELAAYFGTPEKPECHMLYNVSIMVNLWSALASGDVRLLKDQLDKLNALP ENCWFVNYLRCHDDIGWGLDEPVEESLGIDPLKHKEFLYHFYEGSVPGSWAMGELYNYDE ASKDARSCGTTASLCGVERALITHDKPLLDISMKRDLMMHSAMSFLRGFPMLSCGDEIVQ LNGWEYKEDPDRVEDSRNLHRSPFNWENVAKRKQTGTLQKQMWDGLKSVREMRDDPAFAP EAWVTTWDAHNDAVLAVVRHVEGRTVLGLFNFSSARQIARLDSDGDIVLPAEVALEPYQV CVVEK >gi|222441572|gb|ABXX02000001.1| GENE 367 408159 - 408617 306 152 aa, chain - ## HITS:1 COG:Cgl2440 KEGG:ns NR:ns ## COG: Cgl2440 COG0736 # Protein_GI_number: 19553690 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Corynebacterium glutamicum # 1 151 1 135 135 77 36.0 7e-15 MLGLGHDVVDVPAFAEQLGEPGSRMRNLFSMRELWQTAQRVQVKRDGEAVHLAARWAGKE AFLKAWCEAISRRANADGDIAYPYTLDDFPWARIEILDDSHGVPRVMLSPEVRRKLRQSL GLPVDGDDQSCAIHISMSHDGSVASAVVTIEA >gi|222441572|gb|ABXX02000001.1| GENE 368 408598 - 408711 98 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSLHESEVSPACFAEVDMVRFFLKTFERLENAGFRA >gi|222441572|gb|ABXX02000001.1| GENE 369 408656 - 408778 84 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTSAKQAGDTSLSCKDTILPKRFILCHPHCAPLVSRLHK >gi|222441572|gb|ABXX02000001.1| GENE 370 408938 - 418276 11002 3112 aa, chain - ## HITS:1 COG:Cgl2444_5 KEGG:ns NR:ns ## COG: Cgl2444_5 COG4982 # Protein_GI_number: 19553694 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier protein] reductase # Organism: Corynebacterium glutamicum # 1796 2624 51 843 843 679 49.0 0 MNTFFLDRLNGEPHALAFAGQSTPWPVALTDQSANPVLNEALHAHADAAQALLYPVSADL LATTGRPVDLFGFEPNPARLGAAAAASASVPGIALAQLGALLDAASLGYNPAVAKPVAVL GHSQGVLAVHMVQSIVEAGSIEAASAQIDEILAIATLIGVAGTRQARQLGLAARHGEATP MLSVKDITRAQVDALIKRVSGARGPIAVAVTNSATHYVLSGYPEDLAAFGVEVAKEHKHQ AKLREEKVRGGRVFEPVLEYLDVTLPFHSPLMADAVSQAVSWAESCGINADHARELAAEV LLNHVDWAARVRALMKSTDPSALWVLDFGPGTTVGKLFSTVAQGTGVGVVEASTVADRGE LSTLETLPERTQNWTRFAPSIIHTSAGDKVRTAFTELTGKAPVLLAGMTPTTVEPEIVAA AANAGYWAELAGGGQVTASVFDRHVAKLEEELEEGRTVEFNAMFMDRYLWNLQFGSQRIV PKKRASGTPIDGVVVSAGIPELDEAVELIHNLNADGFPYVSFKPGTVDQIRQVVRIAKAV APVKVLIEVEGGSAGGHHSWESLDDLLLSTYAEVREQSNLVLVVGGGIGTPERGADYITG EWSAEYGRPLMPVDGVLVGTAVMTAKEAHTSPEVKQMLVNTPGIPAKGADADPFAPLGEQ WVPSGQAKGGVTSGLSHLHADIYELENSSARCGRLLVRVMKHPEELESRREEIIEALNAT AKPYFGDLKAMTYLAWAQRFADLAFPGVDETYADRFLHLLQRIEARVTTQESGEFASLFA SRADVESDPHAAIAKLAEAYPQADELTVTPMDEAWFPVLVREYPKPMPFVPVIDNDLLRW WGQDQLWQSEDSRYSADSVRIIPGPISVAGITTVDEPVADILGRFEAAMVKRVSAESPIA AKTAFAQLGVASSAEEFIRKSPNISWVGHLMANPAYGTSNGDANYEIRKISSEGSVEKYD LDIHLDTYWDNDPDGGKSKHAVRDIVIPLNVDGNESGLFPVVDRDRLPEHVYRMLADTAG IGNTAITGDKLTAMPVIEQVADKASYPFGQAHASYTLSANLGFDHEAATGGALPSNLVPS RIAPDALVGPAWPAIYAALGSVYVNGFPVIEGLLNAVHLDHLIELEVSEDELLKHIGEQI ALTSWAEDYFESASGRVVTIHVTHSTQDGTVLANETERFAIRGRAYSDALPPEAPDYGGI DAEIESTPRRLLRRVKVTAPHEMTAFARTSGDFNPIHTSHRGAAVSGLAAPLVHGMWLSA TAQYAVQALDGKGAHYEIAGWTYNMYGMVQLDDEVEISIERVGRVAHSGMVLEVTSRIKG NIVSRGTAIVRAPKSAFVYPGQGIQRQGMVLDERAKSPAARDVWERADKVTREKLGFSIL AVVRDNPKELTANGVTYRHPEGLLNLTQFTQVALATVAFAQTARLREAGADIWPAYFAGH SLGEYNALSSFAGVIPLETVIELVFHRGSTMHHLIPRDAKGRSNYRMGALRPNQFGVGDD GVREYVESVSKASGEFLQIVNYNLAGQQYAVAGTIAGLKALKADSSRRVAEYGGKPAFML VPGIDVPFHSTLLRKGVPEFRDKLDALLPQTIDYRGRLVGRYIPNLVAAPFEMTKEFAAK ILEVVPSERIQAALDDPQIWDSYAADDQKLGRLLLTELLSWQFASPVRWIETQALLFGSS EQGGLGVEEYVEVGLGNAPTLANLGSKTLRLPQFAGRDVTVYNVGRDEGRVYMTDSDSLV PEEDADDSAVATSASSAAAAPAVASAPAAAPAAVAEVPVAAASAPAGAPSGAAVADVAFK ASDAIATLLAYSAKVRPDQIGESDTTDTLTNGVSSRRNQLLMDISSELGVASVDGAAEAT VKALSALVNKVAPNYKAFGPVLSDIVRDRVRGMFGAAGVKLGQITKRVTDTWQLGEGWAS HAVAALVLETREGASSRGGDLASLSTDAVSNATAANALIDAAVQKVAADKGIAVAMPSAG GAAGGAVVDSAALDAFAAKVTGADGVLASTAKFVLNQLGIVAPVAEETADENAAVVAAVE AELGADWPKQVEPRFDERKAILFDDRWASAREDLARAYYNNDESALNGSFIGLGKTIADE AAWYAGKSDNADLKAAFNRVAAEAGENASESAENSRFAGDIAVVTGVAPNSIAAQVVNGL LAGGATVVATSHSFKPSVKAWAKQTYREHAAGDAKLWLVPANLSSYRDVDALVAWVGNVQ KKTSGATTTILKPAYEPSLFFPFAAPPVHGNLADSGELFESQARLMLWGVERAIAGLAKI GADTDVQHKLHVVLPGSPNRGIFGGDGAYGEVKSAFDAIVNRARAEKVWSSRVTFAHPKI GWVRGTGLMGGNDPLVEVVERHGLKTYSTAEIAVELLNLSTRESRIEAAKAPLDVDLTGG LGNEPIDIKALRAEAMEDAAQAEAANAKNAIAGNESDTAAKTLIKALPSPRAPRQAKVDL ADWQNVTARPEDEIVIVSVGELGPWGSGRTRFEAELGIHSDGQVDLSAGAVLELAWNMGL LTWNDSPKPGWYDVDGNLVPEEDIAERYHDEVVARSGVRPFDEGMGNDYKDGTDEEEAEV FLDHDVTFSVPTREIAEEYVKLDEAHTSFAADAESGEWNVTRHAGSMIRVPRRAAMTRTV GGQFPKGFDPVKWGIPASMVGDVDKIALWNIVTTVDAYLSAGFTPTEILEAVHPSMVAST QGTGFGGMASMRKLYLDRFLNHEIPTDILQEALPNVVAAHVMQSYIGGYGNMVQPVSACA TAAVSLEEGADKIALGKADFVVTGAIDDIGVESVIGFGNMNATANSEEMYAKGIDARFFS RANDRRRGGFVESQGGGTILLTRGDIALKLGLPVAGVIGFVHSYADGAHTSIPAPGLGAL AAGMGGKDSKLVRDLARLGVTPDDIAVVSKHDTSTNANDPNESELHNTLAHAIGRADGNP LFVISQKTLTGHAKGGACIFQVNGLTQLFKSGVIPANAALDCVDPKLMRDDHMVWLREPL KVGSVKAGLATSLGFGHVSGFAAIVNPGAFEAAVANTAGVEALNAWRDRANERLAAGQRR LEEGMMGRAALYEPIDNRRFHEDSRGYNAHEVEKAMLLDPNARLGASGYFEA >gi|222441572|gb|ABXX02000001.1| GENE 371 418374 - 420038 1876 554 aa, chain - ## HITS:1 COG:TM0716 KEGG:ns NR:ns ## COG: TM0716 COG4799 # Protein_GI_number: 15643479 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Thermotoga maritima # 65 554 28 515 515 492 51.0 1e-139 MTDIIASPAVKEAVKIVMEQQERLGKNAAEAVSAADLPGASQPIRASVLRAAQLAHEAED HARNRQHVKGKLTARERLDLLLDTGSFEEIGRFCGGDINGGRAGAAVITGFGEVFGRKVA VYAQDFSVRGGTLGVAEGRKICRLMDKALDLKVPIIALIDSGGARIQEGVAALTQYGHLF RKTCDASGFVPQLSLILGPCAGGAVYCPALTDLIIMTRENSNMFVTGPDVVKAATGEVIS MDDLGGGYVHNATSGVAHYLGEDEADAIDYARTVLAYLPSNSDLQPPTYAYAATRADRDV AKRLATIVPDNDRQPYDVLDVIRCIVDYGEFVQVHELFASSAVVGFACVNGHPIGIVANQ PNVNAGILDVDSSEKVARFVRLCDAFNLPVVTLVDTPGYKPGAEQEHAGIIRRGAKVIYA YANAQVPLVTVILRKAFGGAYIVMGSKAIGADLNYAWPSSQIAVLGASGAVNIIHRKDLQ KAKDAGKDVEALRSKYVADYERTTVNANLSLEMGEIDAMIDPEQTRETIIESLKLLSSKK RVRKTTKHHGNQPL >gi|222441572|gb|ABXX02000001.1| GENE 372 420038 - 421948 1928 636 aa, chain - ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 3 603 6 590 591 452 43.0 1e-127 MPKNVNKLLVANRGEIALRVVRTAREMGIPTVAVYAEQDRHAQYVQMADDAYLLSGDTYK DTYLNEDLLIDILQRSGADAVHPGYGFLSEVATFAQKVIDVGAAWVGPNPKALVDLGDKI TARRVATFAKVPPVPGISQSISDMRLLLDFAHTHGYPLMLKRTDGGGGRGITLVHNDDEL RGFYMNHDALQGGDLNEYFVERFIDKGRHVETQCGRDSHGNFTVYSTRDCSVQRRNQKLV EEAPAPFLSSEVTDQLETYSRRLFEAVDYEGLGTCEFMVTEQGKVYFLEVNPRLQVEHTV SEEVCGLDLVREQLTIANGGELTVNHPLRGHSFELRLTCEDPAKNLAPSSGTLASLRWPS GPGIRVDSGVVEGDTISPKFDSMMGKLVVTASDRAAAVARVRRALSELKVEGVPTPASLF EQIFNDDEFTAEHGVAYDVSTKWLERKYLNKEAASSQGGQPASMSGASEVDKKESSETFV IEVNNRRVSLTVPNDIVANLTGGAKARDAKRAIQPLRGQGLHHAQKKQQSNDGQSGVIAS PMQAVVTRINVAEGQQVAKGDLLVVLESMKMENYVYAPVKGAVTKIFVGPAAGVEAGETL MTIDVTGANGTKAGENGATGAAVDGTATDGTMEGGK >gi|222441572|gb|ABXX02000001.1| GENE 373 422189 - 422770 1015 193 aa, chain + ## HITS:1 COG:FN2003 KEGG:ns NR:ns ## COG: FN2003 COG1268 # Protein_GI_number: 19705299 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 16 192 3 174 182 70 32.0 1e-12 MLTLKTTLKTATSGTVGSILKPALFAVLMWTASAAGAVPIPGTPVPITLQTFVVMLAALM LPWKQAGAAMLMYLAAGAVGLPVFAGGASTMALVGPSAGFLIGFLPAAIVTSLLKGEART DSLKHGALTAARYLFACVAGCIALDYLLGFIVQSAITGIALPIVAVASMGFVAGDAVKAV IASAVVAGLAKLK >gi|222441572|gb|ABXX02000001.1| GENE 374 422804 - 423691 877 295 aa, chain - ## HITS:1 COG:SA1289_2 KEGG:ns NR:ns ## COG: SA1289_2 COG0340 # Protein_GI_number: 15927037 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Staphylococcus aureus N315 # 62 290 34 244 246 79 28.0 9e-15 MAILDSAAIMPRTCVAADQVLVLDTVGSTNTYAADLVRAGRLFGMDGIAGNLVWSGREIV VVAANEQTAGRGRLDHTWASVPGESFIVSLVVSVPVAIVRDSSVNGWLQMIAGCEMREAI VGAVCDFGGTLDEDVLLKWPNDIFAGGKKLGGVLAEMVPIPDCGDRVAIVIGVGLNLAVA QERLPIDKSTSLQLVARNLPDAMVLRDAIAVRWVQGLRSRLADFEEDPHREAVRAREAMT PICWTLGKQCEAHFVDGTTLQGRAVALNDDASLTIEDQEGVLHRVSTADVGVLSK >gi|222441572|gb|ABXX02000001.1| GENE 375 423775 - 425874 1578 699 aa, chain - ## HITS:1 COG:no KEGG:BAD_0250 NR:ns ## KEGG: BAD_0250 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 672 1 668 701 1153 85.0 0 MPLMSEVKQTGKRSERIGTFLSWMLAVLACLWVAWCCAIGPLYWFGDGLSDFGWLNVLYL VVAFAIWFSIVVALVRFGRGRRVLPQYFARRHEKLCNEIAGTPTTVLGIMLRHLHDAAHS RPGRALHAVIVWTGRKLIRCTDCWWKLMLVFVIGWLWIPTTLLAAFGADIRSQIREFSWA LNQWTGLKQPYIGFFSFVPMDIYPTAHYMWPDNPTYLTDQHNVVLTVFYGAAAAVSRYFT DSNDAGIVVLAALQWLFAAFCCSATANRFFNLPWRRLGVGTFDFSHPERHDCWNMRDYAH PEAGVVARPSRLRAGAKTRFMILLFFMVCPLAVFATISLTKSPLFAFAFVWWFGVWYELH MTHIKALPTINGKPTYLRKRSIMAFTISSCVMLISAKYAWYIILFTLILALINDRKRWKT YLVALLLPTILIHGGIVFLTNTGAIIGGDPIESRGIQLQQIARVAKYNPKGIPADAAKKL EPVFNLDQMAEAYFRQDADPVKSSGIQSKKVSYKWRTVTEDDMTNFNEAWLEIVVANPVI ALDAFFAECFGYFDVTDLPYVSMDYYVNNDYVQNDNAWIHLYNHDWRDAVAGFAKGWGNI PVIGWVTHGNLYVTLMLLVGAAEVVLRRWRSLSWHLPLLLLMGVMITAPANNFERHMLPV AFVFGFVCLQFWRESRNARSAASANVASAHEASQVRQDE >gi|222441572|gb|ABXX02000001.1| GENE 376 425960 - 426739 583 259 aa, chain + ## HITS:1 COG:ML1652 KEGG:ns NR:ns ## COG: ML1652 COG2508 # Protein_GI_number: 15827870 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Mycobacterium leprae # 16 256 164 408 414 103 31.0 4e-22 MNSDQADILDLLAGHTDDSTIERLAFECLMTSLTDDRVASLMNVLGWRGDFDCFAIGGTP ETSPASASLVARKAVRDLGGEHVIVGTYGSFLLALVCQSGAATAEVTCTSIMPAFKDDES VYLSPVRSGVAGASHVLRETLFSLQAAPALASPSRPLRADELLPERALLGDDYAREELYQ NVYQVLHGENPDDPTFVTVSTFLRNGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATD PRDAYVLTTALAIGRMRDR >gi|222441572|gb|ABXX02000001.1| GENE 377 426937 - 427629 1138 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025266|ref|YP_909111.1| 50S ribosomal protein L1 [Bifidobacterium adolescentis ATCC 15703] # 1 230 1 230 230 442 96 1e-123 MVKRSKKYREASEKIDRNNLYTANEAIALVKSMPEYKFDQTVEAVLRLNVDPRKADQLVR GSVNLPNGTGKTAKVLVFARGPKATEALEAGADIVGDDDLVQKVADGFLDFDSVVATPDM MGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAIKDIKGGKVDFRVDKNGNLSFLIGKLSF TEQALDENFKAVADEIKRLKPSTVKGRYVTKATITSTMNPGVPVDPTVIA >gi|222441572|gb|ABXX02000001.1| GENE 378 427644 - 428075 705 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025265|ref|YP_909110.1| 50S ribosomal protein L11 [Bifidobacterium adolescentis ATCC 15703] # 1 143 1 143 143 276 98 1e-72 MAPKKKVSALLKLQIQAGKANPAPPLGPALGSHGVNIMDFCKQYNAATQDKMGQVIPVEI TVFEDRSFTFILKTPPAAALLKKAAGIQKGTENPLTHKVGSVTKAQVREIAEIKMADLSA RDVEAGMKIIEGTARSMGITVTD >gi|222441572|gb|ABXX02000001.1| GENE 379 428290 - 429087 1178 265 aa, chain - ## HITS:1 COG:ML1906 KEGG:ns NR:ns ## COG: ML1906 COG0250 # Protein_GI_number: 15828020 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Mycobacterium leprae # 45 264 3 228 228 159 42.0 4e-39 MTDEVFSDNLDEAPEADLEAVAAVEELQAEGESVPEVAEAEPTAEAASEESAEDEGGEEL DAGAKAVEDFSNSLRTLEGKWYVLHTYSGYEKRVKTNVESRVASFGMEDKIFQIEVPMEE VEKHTEKGKKVITRVRVPGYVLIRMLPDENARRIVRETEGVTGFVGPTKEPAPLSRKEVV SMMAPMIASEALKKAGDKPAANKKRVLEVSYAVGDQVTVTDGPFTTMAAVVSDVEPTTQK LTVLVSIFGRDTPVELGFNQVEKLS >gi|222441572|gb|ABXX02000001.1| GENE 380 429112 - 429339 396 75 aa, chain - ## HITS:1 COG:no KEGG:BAD_0245 NR:ns ## KEGG: BAD_0245 # Name: secE # Def: preprotein translocase subunit SecE # Organism: B.adolescentis # Pathway: Protein export [PATH:bad03060]; Bacterial secretion system [PATH:bad03070] # 1 75 1 75 75 120 94.0 1e-26 MAKAKNSEKAVKPNIFMRLGLFIKQIIDELRKVVTPTSKELFFWALAVFIFVLLLMALVT GMDFGLGKLTLWIFG >gi|222441572|gb|ABXX02000001.1| GENE 381 429675 - 430898 1662 407 aa, chain - ## HITS:1 COG:aq_1969 KEGG:ns NR:ns ## COG: aq_1969 COG0436 # Protein_GI_number: 15606968 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Aquifex aeolicus # 12 407 5 393 394 343 44.0 3e-94 MANMTMADWQTLSERINRVAPSATLAVDSKAKAMKAEGIDVIGFGAGEPNFPTPAAIVAA AAEAVQDPKNYRYTPTAGLPELRKAIADKTLRDSGYGVDPNQVIVTNGGKQAVYESFQIL LNDGDEVIIPTPYWTSYPEAVKLAGGVPVEVFAGADRNFEPSLEDLEAARTERTKAIIVN TPNNPTGAVWNPETVKAIGEWAVEHHVWVISDEIYEHLNYDGAKTTYIGAAVPEVRDQLL VLNGVAKTYAMPGWRVGWMIAPLDVAKAASKLQGHMTSNVNNISQRAAIAAVSGSLDAVY EMREAFDRRRQTIVAALNDIEGVNCPTPTGAFYAFADVSALLNKPLGTSKTAYASTSELA AALLDEGHVAAVPGEAFGAPGYLRFSYALADDDLVEGMKRMKQWVED >gi|222441572|gb|ABXX02000001.1| GENE 382 431020 - 432153 954 377 aa, chain - ## HITS:1 COG:Cgl2305 KEGG:ns NR:ns ## COG: Cgl2305 COG0263 # Protein_GI_number: 19553555 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Corynebacterium glutamicum # 6 374 38 402 409 257 45.0 2e-68 MNTPSQAQVRRAIAEAQTIVVKVGSSSLTKPSGHLDPERLNALVAALARVRLMGGRVVLV SSGAIAAGFGSLGFDSRPTDVADQQACAAVGQGLLMAQYENAFSQYGLRVGQILITVSDT IAPQQYRNVRRTLDRLLDLGAVPIINENDSLASNEIRFGDNDRLSALIANIVVADALVLL TDVDALYTAPPSEPGSRRISYVPNVEDALAKVQVGGTGSNVGTGGMVTKMEAARVAAVSG IPAVLTCAANAGPAMMGDPVGTAFAPINDRGSSRRLWIGFAAHPQGTLVADAGASNAVRG GAASLLAAGVLEVRGDFAAGDAVWIDDEAGNHLAKGLVGFDSEEIPQMLGRNTAQLKRFL GEEYAHPLVHRDNLVLV >gi|222441572|gb|ABXX02000001.1| GENE 383 432234 - 433925 2166 563 aa, chain - ## HITS:1 COG:Rv2440c KEGG:ns NR:ns ## COG: Rv2440c COG0536 # Protein_GI_number: 15609577 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Mycobacterium tuberculosis H37Rv # 1 511 1 476 479 424 52.0 1e-118 MSDFVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFMADQNANSLLDY RFMPHREAGSGTMGLGDTKDGSKGADLILPVPVGTVIFEAKGPQGKPKHPGEQLADLRHA GDKFVVAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAG KSSLIAAMSSAKPKIADYPFTTLVPNLGVVMAGDMRYTIADVPGLIPGASQGKGLGLEFL RHIERTEIIAHVIDCATLEPDRDPMSDYKALEHELAEYADKLELPLGAIPIPERPRIIIL NKVDMPEAKELAEFVKPEFEKLGLNVYVISTASHEGLKELNWALAAMVADMRKEVAEREQ AEEEARVVIKPLEEPRNRRRRNDEGGTVLDFTVERKEAGNGDVWYEVLGTKPERWVMQTN FDNDEAVGYLADRLAKLGVEDELRNKGAKPGDEVRIGKGARAVEFDWDPTIVAGAEMLDG AQLGARGVDLRLQEQDGRSQRRTNAERRRQYHEMMDARQAVREAMMAERKAGHWADPSVD DDRHDETSLFGRGETTDSENVEQ >gi|222441572|gb|ABXX02000001.1| GENE 384 434118 - 434369 424 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025259|ref|YP_909104.1| 50S ribosomal protein L27 [Bifidobacterium adolescentis ATCC 15703] # 1 83 1 83 83 167 100 6e-40 MAHKKGASSSRNGRDSNAQYLGVKKFGGEAVVAGNIIVRQRGTKFHPGENVGMGKDHTLF ALKDGSVKFGVRRDRKVVDVIAA >gi|222441572|gb|ABXX02000001.1| GENE 385 434409 - 434717 463 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025258|ref|YP_909103.1| 50S ribosomal protein L21 [Bifidobacterium adolescentis ATCC 15703] # 1 102 1 102 102 182 91 2e-44 MYAIVKAGGHQEKVEVGDVIYVNRLEAKKGETVEFPVALVVDGSKVVLGAKDLANVSVKA EVVNDEAKGPKISIMKYKNKTGVARRKGHRQQLTAVKITAIA >gi|222441572|gb|ABXX02000001.1| GENE 386 434870 - 437683 3148 937 aa, chain - ## HITS:1 COG:ML1468 KEGG:ns NR:ns ## COG: ML1468 COG1530 # Protein_GI_number: 15827770 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Mycobacterium leprae # 413 930 268 806 924 488 55.0 1e-137 MPNTSEGFDQVEASASPEHAVNVVKFESVQSDPAPRRRRGGRRVVRGVGAAGASLELKVE EHASAPLFEEPKLPVAQPAHDTGDSADSEGMTRPTRRRRRPVQSDDDVREIADERPTRSR RRRSVQVEDEQDEDRPSRRRSRFADDADEYDEMPRRRASVDDSHDEESSVERALDAVDML PEGHEVRHNPRPMMSLLFQEPVLPSVADSRDRADDDRDDSRNDRGERNDRNAQDHDDEQD EDRPSRRRRRRNRDVADEERSEDNRNERDNRDNRNDDADNDEEGGSRKSRRSRRLNAQER RAAAEVEQIEEDLILDDITYAPIDDETRNRHDDDDDEQPTRTRRRRRSRGNREEADEQQR DSDEGESRRRREDDDEDEGTVTRRRRRRRGGAKTDETEEPLVRRSRKQQYIDEITDVEGS TRLEAKKQRRRDNRRERSRQSQLMEQDFLARREHVDRLMVVRERERHTQISVIEDNVLVE HYVSDIQEVATVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDSARLEGQPRR IELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSR LKNIVSKVAPKDMGVIIRTAAEGASEEAITKDLESLVRQWERITSKRDEFLHGKRPKLLQ GEPDVAIRVVRDIFNDDFSKMIVEGDRVYGRIEEYLDTMAPDLKDKLEKWDPAEHEGKDV FDKWQIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGRGKSLEETVTRCNL EASEEIARQLRLRDIGGMVMIDFVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGL VQMTRKRIGQGLVEAFSEECPTCKGRGFILHDEPTVSADYDDPYALKGGDPFVKTNKHGH GTDVQVPKGSSPDVKAKLAQIAAAAVAANNAELGEEA >gi|222441572|gb|ABXX02000001.1| GENE 387 437918 - 438151 112 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQKTTERDMTGNFPDPATHRLLSPPANPRPRLHKSLLRLHKSKEITIREKCRHRLRLVQ TADPTCADRRRKTTNSR >gi|222441572|gb|ABXX02000001.1| GENE 388 438189 - 439385 1194 398 aa, chain - ## HITS:1 COG:MT1240 KEGG:ns NR:ns ## COG: MT1240 COG0624 # Protein_GI_number: 15840646 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 20 397 10 352 354 275 43.0 1e-73 MNELEIGFSASATRQEQLNELMTQIMGTYSVSDDEGPLTDAVEAFLNKQQHLTVRRHGDT LVASTNFGRERRVILAGHLDTVPVIDNFPPRWLEPGDPLIREDVAAGHGRERVIWGRGAT DMKGSDAVMMYLAAALTDAKYDLTYVFYDHEEVAAEKNGLRKVVEAHPDWISGDFAIIGE PTDCGIEGGCNGTMRFDVITHGIAAHSARAWMGKNAIHAAAEILNRLNAYENRAIEVDGL TYQEGLNATLISGGKGTNVIPDECHVHVNYRFAPDKSLAEAKALMIGADAGAELGNGEHV ATGGVFEGFGIEMKDESPSARPGLTSPLAQSLVKLVRERTGREPLAKLGWTDVARFSMLG IPAVNLGAGSPLLAHKHDEQLPESDLLLMANLLEDWLK >gi|222441572|gb|ABXX02000001.1| GENE 389 439524 - 440468 1317 314 aa, chain + ## HITS:1 COG:Cgl2261 KEGG:ns NR:ns ## COG: Cgl2261 COG0679 # Protein_GI_number: 19553511 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 8 314 5 308 309 162 36.0 6e-40 MPGLLSALEGFCVIGIVIGTGYVAARMRIGGPTAQMVLNRFSFFVSSPCLMFAILAKERI FEIFHSSIVVAFFSAVLVGLVFLILNRLFFHLKAADATIGALNSLYLNSNNIGLPIATYI LGNPALVAPILVMQQAVFTPIGLTVLDVTTKGKVSTREILKQPLHQPLLIGSLLGIAVSA ISAKTGHFVVPDCIYDPIDMIGDSAVPMILMAFGMSLHGTKPLQDKSNIPAVFTVAVLKN IVMPIIAFLLSYFVMGFRGATLYACVVLAALPTGQNVYNYAARYNVGLSFARDGILFSTL TSPIFIAIIAVLLG >gi|222441572|gb|ABXX02000001.1| GENE 390 440516 - 442021 1375 501 aa, chain - ## HITS:1 COG:no KEGG:BAD_0236 NR:ns ## KEGG: BAD_0236 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 501 1 501 501 829 98.0 0 MNMFRLWRLFHRSGTRGTSGRTSALAIVAFASATAVFLTVLGGLHGFIWRASADHTFGCM IDSNRCAPGTYETWSKALAHADKLVATVGDGHWTADQATAVMNTYSDGYVMLAAFASLLL IVPFVALAGSAARLAASRRDARLAALRLAGATTAQVTKLTALDAGGQALLGALVGMAGYF ALIPAIMLLDFQNQHFTFEQLWVGLPALAAVTVGVTLLALVSALAALRRVAFTPLGVTQR TGQPMPSAWRALIFLAVLAVGYLLLNSISAFAHLGQMVVYAIIFGVFFLGFAMVNVVGTW VVAMRARSRAKHPKDAATMIAMRRILDNPKRAWRNVSGVALAVFIAGMTSVCGLLATGIG GNHDPFDPSVLYMRDIAMGGFLTLAFAAVLAAVSSGVMQTSNVYDQADEYRMLALEGTDE ATLDKARMMEVITPLNTVMAVSLGCSVLLLFPILATSLLNPASLLTLAAGIGLCYALMVL GGCAANHAAHGLGHAGYRTDD >gi|222441572|gb|ABXX02000001.1| GENE 391 442018 - 442743 291 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 208 1 199 223 116 33 1e-24 MEHILQATDLVMDYSTQQATPNATHMLALNHVDFGIQAGESIAVMGPSGSGKSTLLHALA GIITPTAGNVMFRGANLARLSDADRTKLRRSAFGFVFQSGQLLPELPAIENIALPMMLGG ASYQQATDMAMLWLERLGLRQLAQQRPGEMSGGQMQRIAIARALAAQPAVIFADEPTGAL DQTTGHEIMSILMRTARQTGAAVVVVTHDSNVAAFCDATVTMRDGRLSSPQQSQPTAGGA R >gi|222441572|gb|ABXX02000001.1| GENE 392 442872 - 443621 612 249 aa, chain - ## HITS:1 COG:PA3642 KEGG:ns NR:ns ## COG: PA3642 COG0164 # Protein_GI_number: 15598838 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Pseudomonas aeruginosa # 21 246 12 189 201 99 34.0 8e-21 MAVSVIPTLDLERAIAEQGYDVIVGFDEVGRGSLAGPVMVGAAAIWARDLDGPAGASQGG SQESSHLEVPKGVADSKMLTEHKREAIFDELKSWCASWAVGAASNKEIDEWGISHALGVA ALRALAQAEAKLGIDGNGMLSGKPVKVGAILDGPNDYITKTLNTFDAPEVPVPANVTTKV KGDRYCVAVAAAAVIAKVTRDRLMVELGAQPQYEPYEWAHNKGYGSAAHRDAIAEFGPSD LHRLSWHLV >gi|222441572|gb|ABXX02000001.1| GENE 393 443621 - 444271 595 216 aa, chain - ## HITS:1 COG:Cgl1987 KEGG:ns NR:ns ## COG: Cgl1987 COG0681 # Protein_GI_number: 19553237 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Corynebacterium glutamicum # 25 200 39 256 262 105 33.0 9e-23 MRHAKEENNSGDSFGLRDTLVWCGIPIIIVLLIRIFLLGFYVIPSGSMMNTIEPGDRVIT SKLTPKVFDLKRGDVVVFKDPDHWLRQEDSSKLGGDYLIKRLIGLPGDTVACEGPGKPIT INGVAIDESAYIRPDVDPSSFAFNVTVTEGHVFVMGDNRANSADSRYHQGDSSHGLVPIS DVVGVGLAKYWPLNRIGGLDAHHEVFADVPEGGSAA >gi|222441572|gb|ABXX02000001.1| GENE 394 444391 - 444756 572 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|183601861|ref|ZP_02963230.1| 50S ribosomal protein L19 [Bifidobacterium animalis subsp. lactis HN019] # 1 121 1 121 121 224 92 4e-57 MVNAIEAFDAKHMKPAEEIPAFRPGDTVEVNVKIQEGNNSRIQAFTGVVIARQGGGVRET FVVRKISFGTGVERRFPLHSPVIDSIKVVRKGRVRRAKLYYLRNLRGKAARIVERRDNSE K >gi|222441572|gb|ABXX02000001.1| GENE 395 444834 - 445037 108 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351151|ref|ZP_03742174.1| ## NR: gi|225351151|ref|ZP_03742174.1| hypothetical protein BIFPSEUDO_02739 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02739 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 67 1 67 67 134 100.0 2e-30 MFSAGLPAKDCQSAENHGNLRLCNIPFNLAIVLGWTRRESGLCGVLNPGTAIFKNTSPAR PFEDGQG >gi|222441572|gb|ABXX02000001.1| GENE 396 445098 - 446795 2721 565 aa, chain - ## HITS:1 COG:ML0150 KEGG:ns NR:ns ## COG: ML0150 COG0166 # Protein_GI_number: 15826973 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Mycobacterium leprae # 8 563 9 550 554 649 58.0 0 MAINPPVDATKTPEWAALQKHYDELQSEGISLKQWFADDAERVEKLSFDAGDLHFDLSKN LIKPETLQLFADLAKAVKLDERTKAMYTGVHINNTEDRAVLHTALRRPAEDEGKYIVDGQ DTVKDVREVLGRIYAFADKVRSGEWTGVSGKKIETVVNIGIGGSDLGPVMVYEALKPYAD AGISARYISNIDPNDLAEKTKGLDPETTLFIVVSKTFTTLETLTNAREARTWLLDALKAA GAVDGSDEKNAEAIKKHFVAVSTNLEKVAEFGIDPANAFGFWNWVGGRYSVDAAVGTSLA VVFGPERFEEFLHGFHEIDEYFVNTPFEKNVVVLLGMLNVWYRNFFKVASHAVLPYDQYL HRFPAYLQQLTMESNGKSVRWDGTPVTSETGEIFWGEPGTNGQHAFYQLIHQGTQLIPAD FIAFVNTPNPTKDGDQDVHELFLGNYFAQTKALAFGKTADEVRAEGTPEEIVPARVFTGN RPTTSIFGVALTPFALGELIALYEHITFVEGTVWGLDSYDQWGVELGKQLAKQITPAISQ DDEALAAQDASTQSLIQFYRANRKF >gi|222441572|gb|ABXX02000001.1| GENE 397 447210 - 448217 891 335 aa, chain - ## HITS:1 COG:L181807 KEGG:ns NR:ns ## COG: L181807 COG0679 # Protein_GI_number: 15673902 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Lactococcus lactis # 83 325 20 232 238 85 27.0 2e-16 MSALIQPVALLLIILAGYLFKRAGLFEDRDYRIMQTIIFNLVLPGAIVYSFATNPHDSSM LLISLFGLIVAFIPPVVVFLTSRHRPVQNRAFMMLNGSGFNVGCFCFPVVQAFLGTGAIV PAAMFDIGNCVMVAAGTNVMTQTLLHIKPGMPLTEQYQGNAPTLPYVKPKDKDAKRLARK ALARNVFKGFFGSVPFDTYLVMIILTLANVKIPDIIAALVQPLSNANSFCAMLMVGMLMD LPSGKQDVLQLLKVIGWRLPFGIAFATAAWLLLPFGAEIREAAAMCCLAPIAVFSTLFTD KVLGNAKLAGFTLSITAIISLLLMTGAHFLFVALA >gi|222441572|gb|ABXX02000001.1| GENE 398 448654 - 448902 56 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARRGFAWGETFWYALCLVRGWRVLPGIATLAQSVERLTRNEQVDSSILSSGSSALDVKA SRVSRIRSVSPRYGYLREWRNW >gi|222441572|gb|ABXX02000001.1| GENE 399 448925 - 450229 1060 434 aa, chain - ## HITS:1 COG:SPy0615 KEGG:ns NR:ns ## COG: SPy0615 COG2348 # Protein_GI_number: 15674693 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pyogenes M1 GAS # 22 432 5 408 411 210 32.0 6e-54 MMREVNASEEQEQESSEWNVRELSGSEFDELSAASRYGGFQQTSEMAALAQSDGMQTQYV GLVDSHDAPVAGALVAFSQGRFGVEGSLWLGPLCNGNNREQMTALTEGLREAAERVHAIS LTCWPNQVYCVRDSQGKAMAEPNDEMVREYERLGWKHAGFTRGYDALMNRWNYVKDLREF SNAGELLASYAKNTRRNVKIARNSGVEVRRLNRSELNVFHDICELSSERQHFANRSLDYF ERVYDAFGDKAEFMVAEVHLDRYLQSWEEKLAKFSKDVERWERSLEHTKYPDDVRKKLDT AQKNVESARRRIEDANERIARDGEVVPVAVGLFMWHERELVYFSSGSDDRYAKFYAPTAL QHEMMSRCLERGVTRYNFYGISGVFDDPEDDGRGVLEFKQGFNGYVEELPGEFTLPVSKL RYGVSDLAHKLLRH >gi|222441572|gb|ABXX02000001.1| GENE 400 450390 - 451658 1226 422 aa, chain - ## HITS:1 COG:SP0616 KEGG:ns NR:ns ## COG: SP0616 COG2348 # Protein_GI_number: 15900524 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 5 420 2 408 410 215 32.0 2e-55 MRAFSLVTLSPEAFDDFSAHHADGNFQQTSAAGRLRAGQGIEVEYLGVQENGTIVAGALF ETHRSRLSTFSVVHDGPLCDYRDRELTEYFMTQLKQHAKAKGSAQMEIVPEMPYCLHDSR GGELPADQGGAPADDAVETLKNLGFMHDGFTIGYTAVPRWRYLKDLTGITDEKSLLKSYD KRTQWSVKRAASMGVHVRELGEDELQVFADIEQATAERRNFEYRGEAYFRKFKQAYGSKA HFMVAQIHIGEYIADMESKCDALRKKVDVLQAKYDEHPTTKTERQLGEESRNLAAAEKRL TEAAEYAKDGDVLPAAASLFVEHARETVYLFSGSVEKYKPFYASALIQHDAMLHLCVERG VTRYNFYGINGVFDDPEDEGRGVLEFKQGFNGYVEELMGSFVLPVRPLTFKLKTALRELL RH >gi|222441572|gb|ABXX02000001.1| GENE 401 451732 - 453054 1459 440 aa, chain - ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 5 435 13 437 446 366 48.0 1e-101 MLDYSPALMTDMYEYTMLDACLRDGTANRKCVFEIFTRHLPLGRHYGVAAGQGRILDALE NFHLDDNDLKFLADRKVVGPETIKWLENFHFSGSIKGYREGEMFFPNSPILQVEGTFGEC TLLETLLLSILNYDSAVASAASRMVSAAKDRPCMDMGGRRTNEWAAVAAARAAVVGGFKG TANLLAAQMYGLNAIGTAAHCFTLVHDDERSAFESQIAALGKNTTLLVDTYNIEEAVKTA VDVAGPELGGVRIDSGDLASLAQRVRNQLDALGATNTKITVTNDLDEYALASLQTAPVDS YGVGTMLVTGSGAPTCAMVYKLTERENSAGDMQPVAKKSKDKATVPGRKLAFRSYEYALA DCEHVISGSEEQLAAYQPEEGWKDLLVGYVSNGEINSDYQGHEAIVNAHNYRAQALAELP IGAQSLMKGDPVIPTEITVL >gi|222441572|gb|ABXX02000001.1| GENE 402 453341 - 454102 878 253 aa, chain + ## HITS:1 COG:Cgl2451 KEGG:ns NR:ns ## COG: Cgl2451 COG0689 # Protein_GI_number: 19553701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Corynebacterium glutamicum # 14 251 22 257 258 278 62.0 9e-75 MVAIKDLLGETMIRTDGRKVDELRPVRITRHFTDVPEGSVLVECGNTRVMCTATFTAGVP RWRKDSGLGWVTAEYAMLPRATADRTDRESVRGKIGGRTHEISRLIGRCLRGVVDMKALG ENQVQIDCDVLQADGGTRTASITGAYVALVDAMRWAEKHKHIRSAERVIKDSVSAVSVGV IDGTPMLDLPYIEDSKAMTDMNVAMTGSGEFIEIQGTAEHRPFNRAELNALLDLAEKGNK ELQAAQQSALAQD >gi|222441572|gb|ABXX02000001.1| GENE 403 454242 - 454916 379 224 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 1 223 6 204 207 150 41 9e-35 MRIIVATHNEGKLVEINRILEDCLGVDADQVELVSAGSLNLPDPVEDGVTFQENALLKAR DVAARTGCPAIADDSGLIVDVMGNAPGILSARWAGKHGDDKANNALLLAQIADIPDAKRT ARFRCAAALVVPQTEAGAGADGRYAIAQEIVETGEMPGVLLHEPHGEHGFGYDPLFVPDD QPARAVEAGEKLTSAQMEPAEKNAISHRGKALRALLPSVATLLK >gi|222441572|gb|ABXX02000001.1| GENE 404 455084 - 455530 470 148 aa, chain - ## HITS:1 COG:CAP0107 KEGG:ns NR:ns ## COG: CAP0107 COG0789 # Protein_GI_number: 15004810 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 8 123 3 118 152 65 32.0 2e-11 MRRGMATYTIREVAQRFHVQTSTLRYYEDQGLLCDVERDDAGRRVYTDSHIGRLEAIACF KHAGMSIDELKRFFAYEKDERAHIADMLELLESRHQAILKQRAALEEAYMHVLRKLHLYR DIQHSIETGAPYPDWANYDGKDFRADDQ >gi|222441572|gb|ABXX02000001.1| GENE 405 455727 - 456737 1343 336 aa, chain + ## HITS:1 COG:YPO2980 KEGG:ns NR:ns ## COG: YPO2980 COG0667 # Protein_GI_number: 16123161 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 7 333 2 327 329 385 58.0 1e-107 MLEPTTVYTPSPARYDSMTYNHVGESGLKLPAVSLGFWHNFGDITPYATMRDIVFTAFDN GITHFDLANNYGPEPGSAEKNCGRLLREYFHHHRDELIISTKAGYEMWLGPYGDLGSRKY LLASLDQSLERLGLDYVDIFYHHHMDSSTPLEETMGALATAVQSGKALYVGLSNYDGPTL EKATAILDELHVPFIINQNRYSIFDRTVERNGLKKTAKKLGKGLITFSPLEQGLLTNRYL NGVPADSRIAHDGRFLKESALTPERLQQIRDLNDLAAERGQTLAEMALAWLLHDGYVTSV LVGASRPQQLLDNIGALKNTTFSDEELRRIDEISLR >gi|222441572|gb|ABXX02000001.1| GENE 406 456930 - 457256 336 108 aa, chain - ## HITS:1 COG:no KEGG:BAD_0227 NR:ns ## KEGG: BAD_0227 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 5 108 2 105 105 176 85.0 3e-43 MACSIFDDRDGFIDEADPVSPLSNPDAGTGTAVLERPEEETKLDDGGNGDADRFAHYVSR DRIAESRRTGRPVVALCGKVWVPKRDPSQFPVCPDCKRIYDEMMNSNF >gi|222441572|gb|ABXX02000001.1| GENE 407 457374 - 457868 338 164 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 5 150 7 151 164 134 47 5e-30 MTIAVCPGSYDPVTAGHLDVIERCARFFDEVHVVVAVNAAKTPMFSEETRVEIIRKALEE RNCRNIKVASTTGLITDYCKKVGATVIVKGLRQNGDYEAELGMALVNRKLADVETLFLPA APDLEHISSSIVKDVARHGGDVTGMVPDCVIPLLGEALNNEKRA >gi|222441572|gb|ABXX02000001.1| GENE 408 457868 - 458638 901 256 aa, chain + ## HITS:1 COG:no KEGG:BAD_0226 NR:ns ## KEGG: BAD_0226 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 256 2 276 276 282 67.0 1e-74 MGEETNAYDPAGSQFDDDVTAERPTDRAAQSGQKAQATARAAEPVKPLISMSDLPDLRNT FNPNAPLDDSNDLSRDEFTTVYDIIDKLESALDEAKPILFFPGSVRVDRDEFTEQLDQLK KMMPVQLERASALMRESERRLESAQTQANAIVASAQSRAADTIREANEQAQFLAGQENVT ELARQKARAILDQAQARADHLTQGADKYCTTVMETLQQQLGKLGNDVQAGLNVLYDRQRE ASTHVPHLDANDYPES >gi|222441572|gb|ABXX02000001.1| GENE 409 458653 - 459279 811 208 aa, chain + ## HITS:1 COG:Rv2926c KEGG:ns NR:ns ## COG: Rv2926c COG1399 # Protein_GI_number: 15610063 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Mycobacterium tuberculosis H37Rv # 7 197 27 192 207 100 29.0 3e-21 MARIEDSPWAISVAQVASRAGQSKEIDATFPAPSGIGDEIVGVEEGADVTVVGSFDSIVD GLIFNARISAPVHAECTRCLKPIKRDWTVNVTSFFPYEDKSASVASGKGGKNGKGGVKEE EVDIIAGEDESEDSYPLLEGGSWADIETLLRDTLVEELPLQPLCKPDCLGLCSQCGADLN EDPDHHHDVTDIRFAALEGLKARLEGNE >gi|222441572|gb|ABXX02000001.1| GENE 410 459396 - 459590 341 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025242|ref|YP_909087.1| 50S ribosomal protein L32 [Bifidobacterium adolescentis ATCC 15703] # 1 64 1 64 64 135 95 2e-30 MALPKYKTSRANTHSRRANWKAKAAQTVTCPNCGAPALPHMACPSCGAYRGRVYREAVRS IHTK >gi|222441572|gb|ABXX02000001.1| GENE 411 459913 - 460740 952 275 aa, chain + ## HITS:1 COG:MT2995 KEGG:ns NR:ns ## COG: MT2995 COG0571 # Protein_GI_number: 15842471 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Mycobacterium tuberculosis CDC1551 # 21 224 8 211 240 169 47.0 6e-42 MTQNNADASAVSEGEMTANALLEALGTTLEPDLLVEALTHRSFSHENPGAKNYERLEFLG DAVLELVSTETLYKAHPDMNEGQLAKMRAKAVSEESLSKIAREKLNAGPYILLGHGESDQ GGADKSSILCDIVESLIGATFIQHGIDEARRVVHHLVDETLAEVATEGPALDWKTSLTVK AHGMGFGEPRYQMSVSGPEYAQVFTANVMLGESDEIISTGTGTSKRKAQLAAAEEGWKAL DNRKPEAQNVRKHRKHHHKHSGNESNGSNGENTSK >gi|222441572|gb|ABXX02000001.1| GENE 412 460683 - 461000 153 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFPLIFARGTFLQGYAAAFRCTQSAEPHHRKAAQSLVATCESQSFASNQSMLSADRRICR IRAIFWRIAFRGGMRGRIRSCFLSTCDYLLVFSPLLPLLSLPLCL >gi|222441572|gb|ABXX02000001.1| GENE 413 461002 - 462870 2436 622 aa, chain + ## HITS:1 COG:Rv3003c KEGG:ns NR:ns ## COG: Rv3003c COG0028 # Protein_GI_number: 15610140 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mycobacterium tuberculosis H37Rv # 3 612 14 609 618 673 56.0 0 MLPTPLQAFSGMPKAAATTEKQTIVDGEKMTGAEALVRSLEDLGVKDVFGVPGGAILPVY DAINDETSFRFVLMRHEQAAGHAAEGYAVSTGQVGVCIVTSGPGATNMITPIADANMDSV PMVVITGQVGVNAIGTDAFQEADIVGATYPVVKHSYLVTRAQDIPRVLAEAHYVARSGRP GPVVVDVTKTAQTGDMYYSWPQRMILPGYNPTTKAHGRVLSDAAKLFEQSYRPVLYVGGG AARSDAGKLVQELAEVTNAPIVTTLPARGVVPDSDPKVLGMLGMHGTIAATGAVQRCDLL VAIGARFDDRVTGKLDAFAPGARVIHIDIDPAEIGKNRQPDVPIVGDVATVLKDLIPEIK REQAVHGKPDTSHWWEIINDWREKYPIKWDEPTDGSLAPQWVIKQLSDLADSDTIWVTGV GQHQMWATQLIDFEKPHSWLSSGGLGTMGYGLPAAIGARVGSERFHEGEKPVWLIDGDGS FQMTSEELATAFHDHTPVKIALLNNSVYGMVRQWQTLFYGEHYSATNLMDGENTPEIVDV PDFVKLAEAYGCIGMRAFTEEEAIEAIKKANEINDRPVLIDFRVWKDAMVWPMVAAGDSN DNVTYMPGIKPLQRPKAAADNE >gi|222441572|gb|ABXX02000001.1| GENE 414 462908 - 463456 949 182 aa, chain + ## HITS:1 COG:MT3082 KEGG:ns NR:ns ## COG: MT3082 COG0440 # Protein_GI_number: 15842560 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 10 170 4 164 168 172 58.0 4e-43 MYPASQPGSKRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTAD VDEVPLEQIIKQLNKLLHVLKIVDLDPNTTVERELVLIKVTADESNRSDVLEIVRLFRVR VVDVNPESLTIEATGAEGKIDALLGLLEHYGIIELVRSGAVAVTRGPKALSEKVLGSEIT GR >gi|222441572|gb|ABXX02000001.1| GENE 415 463857 - 464231 241 124 aa, chain - ## HITS:1 COG:no KEGG:BAD_0215 NR:ns ## KEGG: BAD_0215 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 124 89 212 212 207 83.0 2e-52 MDALDRVAVDDLNSSGKLVLVNKLGAKSVHGDDAISFTKTVDDSNMYYVISMCKQKEQAP YSFVLYKDGQPHTLTTREACTSNGIETISLPAKNFPDATSLSIINIGNTDLVVSVYEVKE PHHE >gi|222441572|gb|ABXX02000001.1| GENE 416 464590 - 466770 2487 726 aa, chain - ## HITS:1 COG:Rv1668c KEGG:ns NR:ns ## COG: Rv1668c COG0488 # Protein_GI_number: 15608806 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis H37Rv # 6 325 5 323 372 335 53.0 2e-91 MPTYDLGLEHVSLAFATKNIFNDVTQGVFEGDRIGIVGKNGDGKSTLLHLFKGTQEPDSG RVTIRGGLTLGMLDQRDPLDDNATVREAALEGREDYEWAAETKSREIVEALLGGISLEAK IGSLSGGQRRRADLARLLLKDWDILALDEPTNHLDVVTIHWLAEHLKNRWPAGSGALLLV THDRWFLDEVCESMWEVHDGEIEPFEGGYSAYMLQRVERDRQADVRETKRRNLARKELAW LTRGARARSTKQKFHVKAARELIADVPPVRNTLELKQMATSRLGKQVVDLIDVTQIFEHV QGEADIDPDVADMEASASRVDVVPAMYAEPQVHGSVEVAVDDLTDPRLVDAGVAAAQVAA AAKESQEIQESQENNTDDSAEEITSAAQKITVTGRKILDDVTWLIGPGDRFGIVGANGAG KSTLLKILDGTITPTVGHVNIGKTVKFAVLSQRLDELEKLGKYKIKEVLSRYKPSYIVDG KETTPGQMMERLGFESAQLMTPIKDLSGGQKRRMQLLLILLDEPNVLIMDEPGNDLDTDM LAVMEDLLDTWPGTLIVVSHDRYLLERVTDQQFALIGGKVRHLPGGVQDYLDMTEAIKNG KNPFADEKAGAGKGKRGGSAGTAGSTTEGTAGNSASGSATAETASSAPSTPKLSGKAFHE ASKRVSAIERKLAKLEEQKADLEQQMAAHDPSDYEGLGKLNDQLQAVTDESEELELEWME LSEQLE >gi|222441572|gb|ABXX02000001.1| GENE 417 466877 - 467617 766 246 aa, chain - ## HITS:1 COG:slr0541 KEGG:ns NR:ns ## COG: slr0541 COG0518 # Protein_GI_number: 16332036 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Synechocystis # 5 189 2 188 236 118 38.0 1e-26 MTQSQVLILQHVPWERPGRILDSLDDLGLQYQIINVAKQKKPDLPDFGEVSGVVIMGGPM GALDYDKYPGLKAEAKLARAAVSVGKPVLGVCLGHQIIATALGAKLKSGDAPEIGFAPIK CIDKHDYFSMWNKTVDVLHWHNDVVSLPEGAQPLARSAKTKVQAFRFGSALGMQFHLEVT PTLLEEWLDESSMVKDLKAAGGSKSQLREAFAEYNPQLQPLADQVFSSFAARCNSYGQNL AQSQQG >gi|222441572|gb|ABXX02000001.1| GENE 418 467702 - 469375 1709 557 aa, chain + ## HITS:1 COG:Cgl2589 KEGG:ns NR:ns ## COG: Cgl2589 COG0215 # Protein_GI_number: 19553839 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 39 557 3 460 460 415 46.0 1e-115 MSDSGNTLVVMTNTQEPQNINISSAATAVDAVASAAADLKLYDTASHAVSNFTPIKPGQV GMYVCGATVQSSPHIGHIRAAVAFDVVRRWFERLGYKVTFVRNVTDIDDKILDKAAAAGQ QWWERAYIYEREFTEAYNTLGVEPPTYEPRATGHMIDMIDLIKQIIDNGHGYVVTDENGN PTGNVYFDVASWPHYGELTHQKQTAVADAASEVADAMGPSVDNTGNDKYNPVDPADMSED KHDPRDFALWKAPKDSDPLDARWNTPFGTGRPGWHIECSAMSHRYLKDMFDIHGGGLDLR FPHHENEMAQTRAAGYDSAARWMHSAWVTAKGEKMSKSLGNGLSVPAVLAENSAWVVRYA LGSVQYRSMLEWSDQTLTEAQSAYDRVSNFIERAGAAVGGQPSREEIVSVSADELPADFV AAMNDDINVSGASAAIFTAIRSGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLD PLAEPWVSEGAAGGTAGAGADSAEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGA AGIAIEDTPQGPTWTLK >gi|222441572|gb|ABXX02000001.1| GENE 419 469547 - 471196 2129 549 aa, chain + ## HITS:1 COG:Cgl2009 KEGG:ns NR:ns ## COG: Cgl2009 COG0541 # Protein_GI_number: 19553259 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Corynebacterium glutamicum # 4 482 2 475 547 520 61.0 1e-147 MAAFSSLTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTGRIRER ALGTEVSQALNPAQQVVKIVNEELTAVLGAGVDRPLNFAKNPPTVIMLAGLQGAGKTTLA GKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGEAVASPG LTTGDPVKVARDAVALAKQKLYDTVIIDTAGRLGVDEELMKQARDIRDAVQPNEILFVID AMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDF EVFHPDRMASRILDMGDILTLIEQAQKQFDEEEARKAAIKISDGSFGLDDFLDQLQQVRK LGPMKNLLGMIPGMAAHRKELEQFDEREIDRTEAIIRSMTPAERRDPSIIDGSRRARIAY GSGVTVSQVNALLQRFEQAAKMMKRMSNKAGAGMPGFGGPAMGGGKGKGKGKKGKKKGGK SGNPMKREAEEKALRDKLAGKNSDGKSSGGSAFAKKPQNPALPAGLQDLMGDAGELPPNF GGGLSGLLH >gi|222441572|gb|ABXX02000001.1| GENE 420 471321 - 472355 930 344 aa, chain - ## HITS:1 COG:no KEGG:BDP_0313 NR:ns ## KEGG: BDP_0313 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 344 1 347 347 576 80.0 1e-163 MIIALWIALIICVVWIALGEMPAGWDGHLPLPYLIALIPLLWIPTLVIAVAGFALHESAL GGVAAVVCLASLLRKIAYWMENLNSPNTAQRVAEKLAEKRETSRETGNEAVTESAKHGRF RVMTLNCRFGRANAAAIVSAVKKHDIAVLALQELTDDLVAQLDASGLSDLLPYRQLGESK GTDNGGFNGVWIRIEPSDMSPVTAVIPAADVPGVCFPIDSMRGITFVSAHPKSPMRGCRE WSAGIIGLGELATTQKQGDITVVLGDLNSGTDHPSFRKLLNAGFKDAALCEAKGRHATFP SWLPWPRIILDHVLFTKGLDASDVSSFCVEGSDHLALAATLTLK >gi|222441572|gb|ABXX02000001.1| GENE 421 472784 - 473233 730 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025227|ref|YP_909072.1| 30S ribosomal protein S16 [Bifidobacterium adolescentis ATCC 15703] # 1 149 1 149 149 285 97 2e-75 MATKIRLKRMGKKFYAFYRVVIMDSRTKRDGRAIEEIGTYNPNTQPSTIVIDSERAQYWL GVGAQPTEQVLNLLKITGDWQKFKGLDGAEGTLKTVEAGPDAAARVEAVEAQAQKLKAAK SEADAKAKAEAEAAATEEAPAEEPAAEAE >gi|222441572|gb|ABXX02000001.1| GENE 422 473236 - 473469 346 77 aa, chain + ## HITS:1 COG:MT2976 KEGG:ns NR:ns ## COG: MT2976 COG1837 # Protein_GI_number: 15842451 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Mycobacterium tuberculosis CDC1551 # 1 74 4 77 80 62 47.0 2e-10 MLAQAVEHLIKNIVDFPDDVSVKSHENARGELIRVRVNPEDIGRVIGRSGRTANAIRAVV QALSDHKVRVDIMDVRR >gi|222441572|gb|ABXX02000001.1| GENE 423 473491 - 474078 823 195 aa, chain + ## HITS:1 COG:alr2812 KEGG:ns NR:ns ## COG: alr2812 COG0806 # Protein_GI_number: 17230304 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Nostoc sp. PCC 7120 # 6 192 60 240 246 81 33.0 9e-16 MHSDDPQQPELLRVCRIGRAQGLKGEVTVQIFTDEPEYRFAPGAVLYTKDGEEEYVVENS RTFKNRWIIKFEGIDNRDQSEAANGIVLYGEADDPEDMLEADEWYPKDLIGLEARLAEDN MLGLEPGVVVGKVVDVIEVAQWLLKIRLANPVKDADGVVVENSALVPFVDELVPDIDLEE GYLTLDPPGGLIPGL >gi|222441572|gb|ABXX02000001.1| GENE 424 474213 - 475097 904 294 aa, chain + ## HITS:1 COG:Cgl2001 KEGG:ns NR:ns ## COG: Cgl2001 COG0336 # Protein_GI_number: 19553251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Corynebacterium glutamicum # 1 279 15 288 292 234 46.0 2e-61 MKIDIVSVFPEYFEVLNLSLLGKAQSKGLVEVTAHNLRDWTHDVHHSVDDTPVGGGAGMV MKPEVWSECLDELLQLEPAVIENTENIEDSADSFDTGDSCDTADSDTAQSSAGPVLIFPN PSAPLFTQQDATELSHADHLLFGCGRYEGYDARIPQYYRAQGIDVREYSIGDYVLNGGEV AVSVMLEAITRLLPGFMGNAASIVEESYTGENALLEHRQYTKPAEWRGIKVPDVLLSGNH AKVDRFRRDEALEKTNELRPDLIEALDCAKLDKADRKTLMALGWEVSAAHPRKR >gi|222441572|gb|ABXX02000001.1| GENE 425 475148 - 475762 200 204 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 189 9 189 199 81 32 5e-14 RVVRMRVISGRFKGVALTTPKAGTRPTTDRTKEAIFSHLDSWGVLDDARVLDLFAGTGAL GIEALSRGARELVAVESSAPAAALIAQTLTALKHNRSWEHGMSARVVKARAEKYAASASA VEPFDMVFIDPPYAFETNDCNHLLADLASRELTSSNTVIMLERSTRSEEPTAPENWEITD RRDYGETAVYYIEPSEPISDNGQQ >gi|222441572|gb|ABXX02000001.1| GENE 426 475795 - 478485 1557 896 aa, chain - ## HITS:1 COG:Cgl1294 KEGG:ns NR:ns ## COG: Cgl1294 COG1200 # Protein_GI_number: 19552544 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Corynebacterium glutamicum # 463 867 326 683 707 258 40.0 4e-68 MSTTLETPISSIESNRRRVGALKSLGVVSVGDALTYYPFRVTDPVPARSLHEAKIGEKMA FAAHVLETRVFPMARRGFRLIATVTDDDFAARRNTPKSLASLVFFSYRKSYVDWVQRKLH AGALLVVAGEPSVYDNRLQFTHPDLLTINPVQSQSENGEWNDGFGDPANPPLGNLKYDAQ TIDEALKRVCRPRPVYHATSRISSEHIHESVLKYMDALRGAEYLVTQNAGNFLDNPTQEG DFDIPQIDREIQIKVLGNAIPDIIPEDFREEYGLMHRAEAFMAIHDPVDRKNFDNALQTL RYEEALICQTALVKSRDASRKSKATACPETRLKDDFIASLPFALTNGQQQVIADISADMA HDYPMQRLLQGEVGSGKTVVAVAAMMQAVGSGGQAVLVAPTQVLAEQHYASISTMVSKLG KSDANSSDNQKNLDDANARRSNKRSAQSSKDGEFDAKTIHNNAVDKGVQLADLLDLAASD DVETGFSGKGNDIFGTKDGEIPVFLLTGSMRLAERRRVLAAAASGMPCIVVATHAAFSKS FQAPNLTLAVIDEQHRFGVEQRESLNSKGSTAPHLLVMTATPIPRTAAMTWFGDLDISSL TELPGGRKPIRTFVVPEDNASLMGEMFALIRKRIDAGERAYVVCPRIDADAEDADGALAA SAASGSETAGSSAAAFDDAYDLGEDDDRRAQRPPLHSVAEIVERLQSLPQFKGIRFATLT GRDDDTTKSQVMADFESGITPILVATTVIEVGVDVAKASCIVIFDADRYGLSQLHQLRGR VGRGGTDSGAFLISRAPADSDAARRLDVIQGTLDGAEIAQADLEFRGAGDVLGDAQSGGK SGLKLLRVVKDVKIIEHARVEATRLVAQDPDLLEHVQLAGAVLDFTRGNETFLTSN >gi|222441572|gb|ABXX02000001.1| GENE 427 478879 - 479073 339 64 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025221|ref|YP_909066.1| 50S ribosomal protein L28 [Bifidobacterium adolescentis ATCC 15703] # 1 64 1 64 64 135 100 4e-30 MAARCAVCGKGPQTGFTVSHSHIRNKRTFRPNLQPVRTTIDGENVRVRVCVKCIKAGKVQ RVEA >gi|222441572|gb|ABXX02000001.1| GENE 428 479371 - 481371 1584 666 aa, chain - ## HITS:1 COG:no KEGG:BDP_0303 NR:ns ## KEGG: BDP_0303 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 659 1 644 648 951 72.0 0 MSGEVPDMLGANAEILRSILSQPLPDTLDMIIWRGVTNSAQASPFERFAARLLVEAGAAG IRDIAAENDFDVIRLSTTKRFWLRCNGNDLSNEQFNVVQAVESALNRIDYADDEARRAVH GGMPEACIDENFYIAKSQQYLRNVSGAIVAIDGLQEGENNFRRMRGTEGARGGNWDISTR FANVCENLELPFRLHYRFDVDASSGVMVVRFSIPNTAIMPVASQYRDGFASAYAVRLAGM LAWAAFSSSVRLTQVDLTGCVGDADGIPVISMGFDRVPFMMGALPAMKNGQCDVVPLDVD PLALLNLLRPVRYVGFFDGNRALTPITPLATSAVFLEKRVSEWQDQRALPEGLRGFLRAD RACELDVMHDESPVSTDDVNAIMEENEGSPMVAELQLEAALAQLGESGEAGGVCEAGGTD ETGVAKIGENGEIPLYCSRPGVRLIISLLDGDEHTRYWKLPDAVVDVHQNLGELAKNNGD YERAERELRACIKLAPTSVRFYEELSQVYARTDEYGKAADVLIGALKIAVLPIDCEVLYY RLGYALWQLGRLPEALACYAMMVNGGTPFRTAARDEAEEVSRQMGLPSPDMKYGDACDAL RSGGVPVAPEGKVLDTIARAAICLTDAGFPLLAQDAAWMLGMRDGGDVIGAVAMSLRFGA EGRSKN >gi|222441572|gb|ABXX02000001.1| GENE 429 481756 - 483084 1497 442 aa, chain + ## HITS:1 COG:CAC1585 KEGG:ns NR:ns ## COG: CAC1585 COG2270 # Protein_GI_number: 15894863 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 32 433 4 407 425 339 46.0 6e-93 MSERATAPASAPTSDMASETAPEHMPDPNAKLTTREKKWIVYDVGNSAFVMLSTAVVPIY ANSLLQSAGQSNIVSTWGYAQTIASLIIAVMMPVLGSMADVQGMKVKFFTGFFLTGVVAC CAMALPLSWLVFLVVCILATVGLNGSLTFYDSMLVDITSNERMDRVSSHGFAWGYIGSTI PFIACIALIFGGPSLLGWSTVACTRASFVITALWWVAFTIPLLTSYKQVHYRATAGQTGE AIRGTFAELGSTFRAIRRNKPLWMFMIAFFFYIDAVNTVISMSTSYGTQLGIDSTHLVMA LLVTQFVAFPSAIAYGKLAGRFGAKTMITTAVVAYICIVLFAAFFLRSATEFWILAILVG LFQGGIQALSRSYYGKIIPKNRANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASVGVL SIAILLIVALIFLLLQKDPTRK >gi|222441572|gb|ABXX02000001.1| GENE 430 483382 - 484116 861 244 aa, chain - ## HITS:1 COG:Cgl2475 KEGG:ns NR:ns ## COG: Cgl2475 COG2186 # Protein_GI_number: 19553725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 11 241 18 246 250 150 42.0 3e-36 MAEGTVIAENTVGELMQDSVSRTLAIEMLDGVWKAGESLTLEALQSRFGISRTVAREVAK TLESMNAVLVKRRIGLVARPFGEWQALNHQVIEWRLHSTQRERQLSSLTELRLAVEPAAA ASAARLAPLDVKAKFPVYAARMRQIAEANEEGEAGLAQFHDLDVEFHTLILHESGNELFA ALSDTIATVLRGRVELGKYPMKPKSDALDAHDAVADAIAKGEPERARSAMLDIVDEVARA LNFF >gi|222441572|gb|ABXX02000001.1| GENE 431 484393 - 484944 594 183 aa, chain + ## HITS:1 COG:DR1910 KEGG:ns NR:ns ## COG: DR1910 COG3265 # Protein_GI_number: 15806909 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Deinococcus radiodurans # 8 168 1 162 172 159 48.0 2e-39 MSIHVVVMGVAGCGKSTVAEAIHERLGYVYAEGDDFHPQANIDKMSAGIPLTDEDRWPWL NVINSWMVAREALGENTVVSSSALKRSYREVLAKDVPTFFIHLNGSHKLIQQRLSERKGH FMPPALLPSQFAILEPLAPEENGVEISIEGSVDEMVDRAIKALNAYATTVAATVAAQTAT QAA >gi|222441572|gb|ABXX02000001.1| GENE 432 484941 - 485252 222 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHFAYRDKENDDGDADDRRSNKVHESSSIHGVGLLDLSDSGDSDIWKPILGAYMSVSGES DSWAAVFGSCLSVSVESDKHAPVLGFVCPFLPNRTHADWGMVG >gi|222441572|gb|ABXX02000001.1| GENE 433 485163 - 486509 1864 448 aa, chain + ## HITS:1 COG:PA2322 KEGG:ns NR:ns ## COG: PA2322 COG2610 # Protein_GI_number: 15597518 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Pseudomonas aeruginosa # 9 448 10 450 450 307 44.0 2e-83 MNRGGFMNLIAAAIIGIAIIVLLIAVCKVHPFLSLLAGSFAMAVCAGVEYDKAFDSFTSG VGSTIANVGLLIAFGSIIGTILFKSGGADTIVDTIMSKTPLQRLPWAMALIAFIVGIPMF FEVGVVILIPVVLFAARRAKAPVVLLGIPALAGLSTLHAFVPPHPGPLTAIGALNANLGI TLALGLIVAIPTVIISGPLFGKLAAKWVPIAAPENTAEAEAPKSAENRPSFTSAIAVILL PVVLMLASSIVDLTGQSETVWGRALAFIGTPLVALLITTIFAMVVLGYMQKFTRDAVNGM VGQSFSSVAGIILIVAAGGGFKQTLVDSGIGDVIANSITESAMNPLIAGWLVAVLIRLAT GSATVATVTASGIMVPLATGMSPTHLAMLVLAIGAGSVFFSHLNDAGFWLVKEYFGMTVG QTLKTWSLMETILSVTGLGCVMLLSLVL >gi|222441572|gb|ABXX02000001.1| GENE 434 486422 - 486598 130 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGKFFVFQICFFRYDARESQSQFVCEVLRQSTSESSMTQPKPVTDRIVSISDQVFNV >gi|222441572|gb|ABXX02000001.1| GENE 435 486708 - 487601 1081 297 aa, chain + ## HITS:1 COG:MT1154 KEGG:ns NR:ns ## COG: MT1154 COG1023 # Protein_GI_number: 15840560 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted 6-phosphogluconate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 290 1 337 340 262 44.0 5e-70 MQLAMIGLGRMGGNMAKRIAAAGHEVVGYDRSPESDRTVASLEEMVAALTAPRIVWVMVP AGEATDSTINELAELLEPGDMIIDGGNSRYTDDARHAAELEPRGIHFMDCGVSGGVWGID RGYALMVGGSEEDFERARPIFEALKPEGDSGLVLAGPVGGGHFAKMVHNGIEYGMMQAFG EGFATMVKSDLIKDPAAVMTSWRDGSVVQSWLLDLLAIAFKSDPTLESMPPVANESGEAK WMIEAALELGVPTPSTAAALYARQTSRGGADDILRVVSTMRAQFGGHVTKIDEIATH >gi|222441572|gb|ABXX02000001.1| GENE 436 487958 - 489148 1559 396 aa, chain - ## HITS:1 COG:CAC2832 KEGG:ns NR:ns ## COG: CAC2832 COG0436 # Protein_GI_number: 15896087 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 392 1 391 393 392 48.0 1e-109 MINEAYKAMLGGKSVIRELSEYATARGAEIGYENVFDYSLGNPSVPCPQSFTDEMIALYQ EAEPVALHGYSPSLGITSVRTAIAESLNRRFDMDYTTDYIFPTTGAAGALAHALRVVTKP GDEVITFAPYFPEYQPYVNGTGAHLTVVPADTENFQINFEAFEHALNPGTAAVLINTPNN PSGAVYSAETLTRLAEILRAKQVEYGHDIFLISDEPYREIVFDGGVQPYPSKFYDNTLSC YSYSKSLSLPGERIGYVAVNPRATDAELIVPMCGQISRGTGHNCPGSSVQLAVAKVVDET SDLSVYEKNMNLLYDALVRLGFDVVRPGGTFYIFPKALEDDANAFCMKAKDYDLILVPSD SFGVPGYFRMAYCIDTEKVERSIAAFEKFVHEVYGR >gi|222441572|gb|ABXX02000001.1| GENE 437 489267 - 489941 598 224 aa, chain - ## HITS:1 COG:no KEGG:BDP_0293 NR:ns ## KEGG: BDP_0293 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: B.dentium # Pathway: not_defined # 1 212 1 212 217 376 86.0 1e-103 MPRPRRDSEILPAKDRLENAFWELLSEREYNKITVTDIVRTADVNRNSFYYHFSGLPELA DSAILHAVEDTPMPGVPGRDFNPDTEWRKHVTALLRDPEQRQRLDRLALLAGPHSSPELV SSLKEFGRLTMISVLGLDADNLDLKTDLMLDFTVGGMLAVLQRWPKLHEKLPLDTVFNED VAVLAAGMFMSMSKADMLEYWRRIFSEGFVPGMAISQQQPPSTK >gi|222441572|gb|ABXX02000001.1| GENE 438 490111 - 491316 1073 401 aa, chain - ## HITS:1 COG:no KEGG:BDP_0292 NR:ns ## KEGG: BDP_0292 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 401 1 401 401 679 82.0 0 MGNIIDYARTETRSFEALPFREADALVLAQLSYDEVPECVLRLDDLVAKYGTLQARAKQF DIRRPIASLRMLRKPPFGGVTIARADDELNHDKPVADHDVENVGLVDPQVTHDFYHAVAA NPRFSDVEMSAYCEQFDGGAQTQFAAVTFRLPSGTLVVAFRGTDDSLVGWKEDFNMAFQY PVPAQVSAAEYLKKVASLWDGPILLTGHSKGGNLAVYAAMNAEDEIKDRVERIYSLDGPG FPEEVVKSFEYASVSDRIVKIVPDSSVVGMVFETPERCVVVKSDVDGIMQHFAFSWQMHG GEFAKAEDVADSSVVFNKSLNGWLAGLSKEQREHAVDALFSVLEASGAGSISAIVAAGPK VIPEMLGTYVGLSSADRRNINQALVILLQAALARNPKVQRK >gi|222441572|gb|ABXX02000001.1| GENE 439 491316 - 492542 1041 408 aa, chain - ## HITS:1 COG:no KEGG:BAD_0193 NR:ns ## KEGG: BAD_0193 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 394 1 396 401 597 76.0 1e-169 MGNVVDYVRREFRGFGELAFSNVDSLVLSELSYMRLPGLVPAFGEAKSVATVPIRDLLRA ESYDEMFVSNSSEMNDYRLSLLRAVCESPRFRGLRVGEYDERLDEGEQQQFAAMTFDLGA DFGLYVAFRGTDGTLVGWKEDFNMAVRCPVPSQESAYRYADSILDRTERFLSAKKSPDIM IGGHSKGGNMAVYAAMQITQSDIEATDERAQRLGLLPALGGSVPGRNCRISRIFSHDGPG MSQVMVHSRAYQAIAARIDKTVPESSIIGMLLQSQIKPTFVKADAISILQHMGSSWQVTQ SGEFEQASELTGGAQLIGKTIDGWFDRVSQEQRERAINQIYDIFAAAGYGNIADLVAHWT DSLPKIVAAARGTDVQTRELIKDVFKAIPASAAKVAVGELRNDKEGDA >gi|222441572|gb|ABXX02000001.1| GENE 440 492768 - 493553 1099 261 aa, chain + ## HITS:1 COG:alr1196 KEGG:ns NR:ns ## COG: alr1196 COG0668 # Protein_GI_number: 17228691 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Nostoc sp. PCC 7120 # 17 222 99 307 357 102 30.0 1e-21 MEPIGIVVDWLKTNSGKIILLIVVALLAAVIDKALTRIVSKVLDRSQVPNASIFINILRA VVWTLAVGTVLQPVFGINPTTIFTALGIGGLAVSLGMKDTIANIIGGFGLMLGRVIQPGD LVNVAGTDGVVEDINWRQTVVRERNGNIKIIPNSILNTASLEKLNPSNEMLVRVPFTAKA GTDIDEMTRQVVQAVQRDTADLADPRFPPKVRLTGYSPYGINVEVCAYAKPESLLPDMIN AVARSIANADFLENRAINKES >gi|222441572|gb|ABXX02000001.1| GENE 441 493644 - 494606 1031 320 aa, chain - ## HITS:1 COG:no KEGG:BAD_0191 NR:ns ## KEGG: BAD_0191 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 319 51 372 372 377 62.0 1e-103 MFSRIGAGMCLMVVIWYALATVLSGMLYQVLHTTNLPNWAVYVASDTPLYLVAMPLAVLI MGKSSVIETRKFDMKPGQFFKLLVMCFPLMYVGSLIGNMLASLLSGGKASNSVSDLAMQF DVWNVVFLVILGPLFEEWIFRKELISRTRKYGEKTAIVFSALFFALVHMNLFQFFYAFAL GLMFGYVYVRTSKLRYSVAMHMIVNFMGGVVAPWVVTNIDIDSLMNVLTSAENGDGTAMM QWMGQNATGMMIFGIYMLLYYGLIIAGIVLLIRNRKNFEFYTAPEELPRGVRTSTAILNV GVVTYIVVTVIITSINLMMQ >gi|222441572|gb|ABXX02000001.1| GENE 442 494890 - 496071 1291 393 aa, chain - ## HITS:1 COG:mll3065 KEGG:ns NR:ns ## COG: mll3065 COG3842 # Protein_GI_number: 13472692 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Mesorhizobium loti # 56 355 16 319 354 258 48.0 1e-68 MTLADQKATIARTSEAFVNANPSAETVTRAAREVLNDSAERGGGVQMLNVDKIYPGATNK ALDNFNLEINPGEMVVLLGGSGCGKSTALRSLAGLEDIQAGRILVGGQDVTGVPVNKRNM AMVFQAYSLFPHMTALQNVEFGLEIRGMGKTERRKQAMEKLELVGLADQAGKYTQQMSGG QQQRVALARALAVNPRVLLLDEPLSALDAKVRVQLRDEIRRIQLEAGTTTVFVTHDQEEA LTVADRIGVMNHGCIEQIADPQTLYRRPGSEYVATFIGLTNRLPGITNGEEAVVFGQRVP LLEASKRDASTVLVRPENLVITLAANDGNMVGEHGRVDMVHFLGALARVDLTVAAGVGHL PVTVQLPANELPAGLTVGSEVVVAPRPIAALAV >gi|222441572|gb|ABXX02000001.1| GENE 443 496068 - 496931 1099 287 aa, chain - ## HITS:1 COG:BMEII1122 KEGG:ns NR:ns ## COG: BMEII1122 COG1177 # Protein_GI_number: 17989467 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Brucella melitensis # 17 275 10 262 272 122 31.0 8e-28 MAVNHTEAMPPQLRAARVRKQRVIKAIILTFTLLFLFVPLVSMFVFTIRHPLSGKWSLDP WIAILTGDGSALGADLSTLWSGLGSSMGLCVVTVVIMLLLMVPTMVIVHIRSKQLERAIE WVATLPLTIPAIVLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRALAVGLNSI DVKTLCEASRSLGASWPRVFFRVLIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQV ALYQLGQSNSQISTAMSLLALLFGVILLVALDLISDALRKSKESNES >gi|222441572|gb|ABXX02000001.1| GENE 444 496922 - 497875 984 317 aa, chain - ## HITS:1 COG:AGc3892 KEGG:ns NR:ns ## COG: AGc3892 COG4132 # Protein_GI_number: 15889429 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 44 316 57 329 331 168 37.0 1e-41 MTAAITPKAGVIGGRNAREARGTRGNGPSATSDFATHRREIGTFVVTIPFFAYTACFLLA PTVIVIVGAFRNVDGGFTLNNFSKLFEANTIAAFATSILVSVISALIGAVVGAVASYALV IGSKPNGLLRRMVSAISSVLAQFGGVMLAFAFIATIGINGVGTMLIRQLTGLTVNPNWLS SLPGLITVYCYFQIPLMIIIFLPAVDSIRPQWREACESLGGNTFQYWTRVAGPILVPRFI SALLLLFASAFSAYATAAALFSQRSILVPLMIQGAMRNEMDPNQQGFAQVLAFAMIIVVA LVMMLSHAVEKKAGQWQ >gi|222441572|gb|ABXX02000001.1| GENE 445 498093 - 499256 1752 387 aa, chain - ## HITS:1 COG:mll3069 KEGG:ns NR:ns ## COG: mll3069 COG1840 # Protein_GI_number: 13472695 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Mesorhizobium loti # 58 386 28 364 368 203 39.0 4e-52 MISLRKLAAGSLAAVLAFSMAACGSDSTDSSADSTSGKAVKVDEKSAKATSLADFGTMDD LVAAAEKEGQLNVIALPHNWSNYGEVINGFKKKYPNIKINELNPNASSKEEVDAAKTNKG TDAAPDVFDLGLAVASTSTDNFASYKVQAWDKIPDSVKNADGKYYADYTGIMSIGWNADK YGDINSLDDLMDPKFAGTVALNGKPAEAGAAFNGYLMINQLAGGDINDLQPGLDYFKKLK DAGNLTTVDVTDGTIDSGQTGVVMDWSYNQASYQKSLKEKGVNWKFKTFKNAQVVSYYNQ AINVDAPHPAAARLWEEYLYTADAQNEWFKGGANPVLLDSMKEDGTVDQDTLKTAITIEG DPVTYTNDDSTRITEWLQNNWDKTIGN >gi|222441572|gb|ABXX02000001.1| GENE 446 499496 - 500632 1504 378 aa, chain - ## HITS:1 COG:STM0380 KEGG:ns NR:ns ## COG: STM0380 COG1181 # Protein_GI_number: 16763760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Salmonella typhimurium LT2 # 1 377 1 351 364 272 40.0 7e-73 MAKQRIVVMYGGKADEHSISCISAAGVLRALDTDKFEAIEVGITKNGEWIVGGEDPRKWN MSEGLPMVEKTDSSKDVVLDVALGQDGFFAREDDGTLTSLGHVDAVLPVLHGPYGEDGTI QGLFEMMNVPYVGCGVLASAACMDKHYTKVLLAAAGIPVAPGITLDVRDYDAASEFAAEA DEMLAAVQQAGLQYPLFVKPSRAGSSFGVTKVEHEGDAAELAAAVFEASHHDWRVLVEQG IDAREIECAVLCPKAGEAPQASWPGEIVLDKRAEGDDQFYDFDSKYVNSDASHVEVPASL PEETLNRVRETAKKAFIAVDGAGLSRVDTFVTADGEVMVNEINTMPGFTPISMYPKAWEA TGVSYTDLITTLIEGVLR >gi|222441572|gb|ABXX02000001.1| GENE 447 501105 - 502103 1336 332 aa, chain - ## HITS:1 COG:Cgl1288 KEGG:ns NR:ns ## COG: Cgl1288 COG0240 # Protein_GI_number: 19552538 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 332 1 332 332 265 45.0 1e-70 MTNVTVLGAGAWGTAFGQVLADAGNNVTMWAIEPEIVEGIRDHHHNGVRLPSVKVLPSNM TATGDRAEAVANADIVIVAIAAQFARVALVEFKDLIPETALVASLMKGIERTTGKRMDEV VMETLDLPADRFAAISGPNLSKQIADREPAATVVACENLDNARKIAAACTTDYFRAFVTR DVIGLEMCGSLKNVVALAVGMARGAGYGENTAAMIETRGLAELTALGEAAGADPKTFAGL AGVGDLIATCGSPLSRNYTFGSNLGKGLSVEEATKVSNGVAEGVPTTDAVVALGKQYGVP TPLATAMSHVLSDGISCAQMLSELFGEGISEE >gi|222441572|gb|ABXX02000001.1| GENE 448 502308 - 503198 759 296 aa, chain - ## HITS:1 COG:no KEGG:BAD_0184 NR:ns ## KEGG: BAD_0184 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 296 11 306 306 554 91.0 1e-156 MERMASKGKPSPRSAVKPLSDEQVAKLAQRHHLVDPTHDFPCGPRKANEAEIAAQNPKAT HRLLTGCDIVFRNRTKLKAWGIEHVPETGPFITAATHVTMFDVFVPMISMFHQGRRPRYM AKAEMASWPLIGKWFQLVGMQPVQRRSGKAKAIEETSVEILTSGRPLTVWPEGTVTRDPQ KWPMSMKNGVGMIALEASRRLGYQIPLYCAVTWGAASINHWWPWPRKNVVMCYDEALDYA DLLADCDSWGEEVPEDLANELTRRIRVRMTEVMAEIRGEQAPDGYWDYRTMSRVKD >gi|222441572|gb|ABXX02000001.1| GENE 449 503688 - 505013 1688 441 aa, chain - ## HITS:1 COG:CT455 KEGG:ns NR:ns ## COG: CT455 COG0766 # Protein_GI_number: 15605182 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Chlamydia trachomatis # 9 438 4 432 444 375 47.0 1e-104 MSDNNNDILHVEGGKPLNGTIKVRGAKNFVSKAMVAALLAPGTSVLKNVPEIRDVHVVSD LLRLHGVDVTVDGDHGVVTIDATNVQLADVADVDTLSGSSRIPILFSGPLLHRLGEAFIP ALGGCNIGGRPIDFHLETLRKLGANVDKEHKDGIHITAPNGLHGAKIHLPYPSVGATEQT LLAAVLAEGKTELSGAATEPEIMDLVCVLQKMGAIISVDVDRTFRIEGVKELKGYTHTSL TDRIEAASWASAALATHGDIFVKGATQPEMMTFLNVFRKIGGEFDITDNGIRFWHPGGDL KPVAIETDVHPGFMTDWQQPLVVALTQAKGLSIVHETVYENRFGFTKPLVQMGATIQLYR ECLGSLPCRFQQRNYKHSAVIFGPTPLTGRDIDVPDLRGGFSHLIAALAAKGPSNVQGIS LIDRGYADFRGKLEALGADFD >gi|222441572|gb|ABXX02000001.1| GENE 450 505437 - 506615 1314 392 aa, chain - ## HITS:1 COG:PH1516 KEGG:ns NR:ns ## COG: PH1516 COG0167 # Protein_GI_number: 14591298 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Pyrococcus horikoshii # 149 377 61 265 303 65 28.0 1e-10 MSQGFAPFYDVNRTYEDNYLQGPFGAFAEVLRADASDSAGSVTSVVAEVASDSSSEVQGV QTIQAAQAQEFLGFRVNLPFGIPAGPLLNERFTTAAFRMGFDLAVYKTVRSRAWGCNAFP NVLAVHPRNADGSLVPGSAELDEGVLADTRYELPISISNSFGVPSRDPDEWQPDMQKAIA AAGDGQLLVPSFQGSRVEGMDREAYIADHVTTAHLVAETGAGLMEMNTSCPNEGHNRLLC HDPHLVGEITEAVKNEIGDRPLIVKLAYIPNDADLEIMVKETAGHGAVQGFSTINTISAK LVDANGNQALPGAGRDRSGVCGNAIRGAGLDMVGRLNAIREKLGLDFAIVGVGGVIRPED YKAYREAGANAVMSATGAMWNARLAQDIKAAL >gi|222441572|gb|ABXX02000001.1| GENE 451 507058 - 507747 846 229 aa, chain - ## HITS:1 COG:Cgl1285 KEGG:ns NR:ns ## COG: Cgl1285 COG0066 # Protein_GI_number: 19552535 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Corynebacterium glutamicum # 1 197 1 195 197 253 63.0 3e-67 MEKLTTLTGVAVPLRRSNVDTDQIIPAVFLKRVQKSGFDDALFYAWRRDPEFVLNQPEYK RGKILVAGPDFGIGSSREHAVWALHDYGFRVVISSRFADIFYGNTAKNGVLAAIMPQESV ELLWKLLDEEPGRDMTVSLEDRTVTCGDVTLPFEVNDYTRWRLMNGYDDIDLTLQYEDDI VTYEKMRAEKFPFKPKTLPAKREPEQLIASAREGEYPDWQGPLADRGII >gi|222441572|gb|ABXX02000001.1| GENE 452 507828 - 509231 1634 467 aa, chain - ## HITS:1 COG:MT3066 KEGG:ns NR:ns ## COG: MT3066 COG0065 # Protein_GI_number: 15842544 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 467 10 472 473 657 68.0 0 MGTTLAEKVWADHLVRKGSDGAPDLLYIDLMLMHEVTSPQAFEGLRLAGRKPRHLDQLIA TEDHNTPTADIDRPNPDKISALQLSTLEKNCKDFGVRLCPLGDADQGVVHAFAPVLGLTQ PGMTIVCGDSHTSTHGAFGAMAIGIGTSEVEHVMATQTLSLKPFKTMAVNIEGELPKGVT AKDIILAIIAKIGTGGGQGHVIEYRGEAIKKLSMDARMTICNMSIEAGARAGMIAPDEVT FEYLKGRPHAPEGEMWDKAIEYWKTLKTDDDAVFDKEVTIKAEDLEPYVTWGTNPGQGIK ISGVVPDPASFNDETERTAAERAIAYMGLTPGMRIKDIAVDTVFIGSCTNGRLEDLRVAA SIMKGHHKAENIHRVLVVPASSRVRLQAEKEGLDKIFKDFGAEWRNAGCSMCLGMNPDKM VARERSISTSNRNFEGRQGKGSRTHLASPAVAAATAIRGTISSPADL >gi|222441572|gb|ABXX02000001.1| GENE 453 509307 - 509492 93 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351218|ref|ZP_03742241.1| ## NR: gi|225351218|ref|ZP_03742241.1| hypothetical protein BIFPSEUDO_02808 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02808 [Bifidobacterium pseudocatenulatum DSM 20438] # 11 61 1 51 51 87 100.0 4e-16 MVFEPGSNAFMPVYEILACNAHITYAPSSLQIMSKSPRLWHISPYVPTKSLKIQIFFQLF P >gi|222441572|gb|ABXX02000001.1| GENE 454 509608 - 510402 962 264 aa, chain + ## HITS:1 COG:MT3067 KEGG:ns NR:ns ## COG: MT3067 COG1414 # Protein_GI_number: 15842545 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 27 242 38 252 267 186 52.0 3e-47 MPESQSDETELPAETHHTTSSQSNEIHSGVGVLDKTVKILDALESGPATLGQLVSSTGLA RPTAHRLAIALERHRFVLRDQHGRFVLGSRFAELAAAAGEDRLLTAAAPILQTLLDRTGE SAQIYRRQGDMRVCIAAVERASGLRDSIPVGAMLSMEAGSAAQILLAWEDSERLHQGLRH AKFTAAKLTAVRKRGWAESVNERDEGVCSISAPIRNASGQVIAAISISGPDGRMGSNPGR RYAPLVMAAGKYLTDALIKASSGR >gi|222441572|gb|ABXX02000001.1| GENE 455 510523 - 512046 842 507 aa, chain - ## HITS:1 COG:no KEGG:BDP_0266 NR:ns ## KEGG: BDP_0266 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 506 1 478 478 690 71.0 0 MTELQNAAKAAATRPRIQPAEEGDDRPLSVSARLGRLQFHQSGKFRVLQLADIQDGPKVS KDTVKLIEASLDATRPDIVIFTGNQIAGYDPAYAQTTRKRRWSAAAGISSKTASSKSSEA SERFEAALERTCASVRATVEQLVRPLADRGIPWAVTFGNHDFQCGLSNAEIESICREFPG CVNPEPTGGESGLGGANSANSVGSMDSAEDAGFVQLRAESYLPNQRVFACEPGTFALPVA DVDHTMSVLGLVLLDSGDYARSGGYGSPSAEALRFLAEVPEMMATQSQKQAGSHETAQSQ EKAVPCMVFQHFPVQQYYQLLKPTAANAARAIEGYRNFAGKHYVLDEEKTLPGSYLGEGV SCPDADSGEFAILEQHDYFAISAGHDHRNAFVGTVPVSREMASADAQTAASPGKVGGLTM IASPTSGFGSYGPVPQKRAARLIEFDIRHPYEPRTQLLEYGELVGKPSAGKAYAYGMTSE SKPESEGVDLLHRPTWWSKLLTWLRKK >gi|222441572|gb|ABXX02000001.1| GENE 456 512528 - 514048 2196 506 aa, chain - ## HITS:1 COG:Cgl1263 KEGG:ns NR:ns ## COG: Cgl1263 COG0008 # Protein_GI_number: 19552513 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 15 505 4 486 493 561 58.0 1e-160 MTEAENTKPELPEHVRVRFCPSPTGIPHVGMVRTALFNWAEARHTKGTFVFRIEDTDAQR DSEESYNQIIEALNWLGIDWDEGINVGGPDGPYRQSERGDIYKDVAAKLLEAGYAYESFS TPEEIEARNVAAGRPKAFGYDGYDRDLTEEQKAAFRAEGRKPALRIRMPDEDVAFDDLIR GRIEFKAGSVPDYVIVRPNGDPLYTLTNPVDDAMMNINVVLRGEDLLSSTPRQIVLYRYL IELGVAKEMPLFGHMPYVMGQGNKKLSKRDPESNLFLHRDNGFIREGLLNYLALLGWSIA ADRDVFSMEEMIEKFDVRDVKANPARFDLDKAISINAEHIRMLEPQDFLNRAVPYLNRDG VVSADSWDALTDREREVLSASVELVQPRVRLLGEVAGMVGSLLSTEGYIEPDDDAKKQLK DSAPAVLDAAIAALSDVAEDDWKTDFLHETLNKSLIEDGGYKPRLAFGPVRVAMSGRRVS PPLFESMEIVGKEITVARLQGLREHL >gi|222441572|gb|ABXX02000001.1| GENE 457 514117 - 514365 89 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351222|ref|ZP_03742245.1| ## NR: gi|225351222|ref|ZP_03742245.1| hypothetical protein BIFPSEUDO_02814 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02814 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 82 1 82 82 166 100.0 4e-40 MNILQLIDPMIAATNPYNTMLGMSRAIDGLPQRVRRCPTSKGIFAGSVGIVPHCNIFRYF WRCKSIVLIDFTFLMSIHFPKG >gi|222441572|gb|ABXX02000001.1| GENE 458 514370 - 515683 1295 437 aa, chain + ## HITS:1 COG:lin0679 KEGG:ns NR:ns ## COG: lin0679 COG3152 # Protein_GI_number: 16799754 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 90 202 5 123 136 66 36.0 8e-11 MTDPNQYNPQNPQQAQQYGGYGSYGQNDYGQQAPQYGAPQYSAPQYGNAAGYNQQQPQYG APQPQPQGSGSFFALTAPLDQPAYNCTIGEAFIRFWKKYATFKGRASRGEFWWWVLCTFI IQIAFAVIFAVLGAIIDSNTANGMRSFVNTIWALATIVPSLALSVRRLHDTNKAGTTLVI LYAIDFIGGVLLSVGLVMTGLGAISVIGGGSSSTGVAGILLLIIGFIACLATSIVLIVLM AKKTDPAGARFDDPAAGNGYAPAPGMPPTATAQYAPNGTPAPVADPYAAAVPTPTADPYT AAAPAPAMPAPTPAMPTADPYGAPTPAPAATNTPYGNPYGAPYGTPTDQYAAPAMPAAPA AQYTPAAPATPHAAPAPEAPSMPSMPPLPTVPEQSTQLDQTQFDRPTFGNDSQGQTPYGS DDSDDSDDPTAYGNIQH >gi|222441572|gb|ABXX02000001.1| GENE 459 515839 - 516942 860 367 aa, chain - ## HITS:1 COG:no KEGG:BAD_0174 NR:ns ## KEGG: BAD_0174 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 26 366 1 340 353 273 41.0 6e-72 MQSWKGWMLLGPVRKTKCRSCKGARMAFTINNGALYQLFDRPHMKIAIESCVGVVELWPL QTVQEMENDAKYTEDLQVRFSCTMARAMLRLSHGINPSVAEAVYEGMDEIPGCDPEIVQA LTRANQAYDVMRNYSETNNADLFFEAADILGIFIDAHVETEVRNILQKIVEYIRQSVSLG FDGGALEDVNYCYAFTTTPRTLTGRFLAALAVGDGLMNLMCEGIDDVDEQTVRVLPVMLY INELCEQMAVPPIYVGDVTLSRMVALRNAVREAGRATPLEENSFCDNTFTITADNVIPCA GMEWDHHAECLRWDPKRAEQEAKDEDERKSKEALAEKFNLMTDAMKSMSYMDDSDDSGDS GEGADAA >gi|222441572|gb|ABXX02000001.1| GENE 460 517034 - 517693 731 219 aa, chain - ## HITS:1 COG:Rv0525 KEGG:ns NR:ns ## COG: Rv0525 COG0406 # Protein_GI_number: 15607665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium tuberculosis H37Rv # 1 216 1 201 202 119 38.0 3e-27 MPATTIHFVRHGKVENPGHLLYERLPGFHLSEVGVRMAQATAHYIAVNPRLNTVSAIYSS PLERTRETAGEILTALNEVRETRGEEPLKLTTDERIIEARNEFRGTRIGYGEGALWKNGN WKLVRNLWKPSWGESYQSIAHRVQAFALEKVGEHPGEQIIVVSHESPIWSYRHMLETGHP EHNMLLRHTALASITSITYDCDTRKVLSIAYVDPAADVK >gi|222441572|gb|ABXX02000001.1| GENE 461 518143 - 519567 1594 474 aa, chain + ## HITS:1 COG:AGl1094gl KEGG:ns NR:ns ## COG: AGl1094gl COG0477 # Protein_GI_number: 15890666 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 464 5 395 409 134 26.0 3e-31 MTNSVLAGAKSIGQHLFGGYAELLRIPHTARFSVGSVIACMPFPMVGMTITISVQHYYGN YSLAGALTAVQAIALAVASPVLGKLVDKFGQRQVSIPTIIVWMIAATALVSCITARVPSW ILFCIVPFMAAIPPWGAMSRQRWTTLLKGDTEKTNRALSLSGVFDECMWVIGNPLASTLA VISGLLAFSFTGVCVVVGALMFLTELSTEPKSQTQLAREAGMTRKEYREREAARSKALQA EAAIEYARDRARSEGKTAAEVQAAMDQAAADVNAGRKESIWGPGLIAVCVTWFGLGAFQS AASISIVAFATEANMKQYTGFVFACFSFSSLIGALVYGAKNWTIPLWKRFYFCLAVVDLG IGSFMFAKHLWVIMIIYLFIGVCQAPTWVNGNQLMLHLVPPTRFTEGMAWMGAMNSIGGS VGSAIAGQFIDRMGSHGGFIVVTALALTSLAIALFGFKQIKDSTEQPMLTTVSV >gi|222441572|gb|ABXX02000001.1| GENE 462 519744 - 520280 665 178 aa, chain - ## HITS:1 COG:no KEGG:BAD_0171 NR:ns ## KEGG: BAD_0171 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 178 9 186 186 311 88.0 1e-83 MKFGLVGVIAFIIDWGILNLLVGVFRMHNVLAATISFIISLIFNYIASMKLVFKHRDDMA RWMEILIFVIGALIGLFMNDAIIWISTYGMNHDAYVSQSTEYLIRTNVGKLIATAVVMVW NFLTRKWLLDDTHTNAMNRLRKADNRLTPEELEAKWQNSFSHKLGIWSLEHTPNGWPK >gi|222441572|gb|ABXX02000001.1| GENE 463 520197 - 520430 73 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHAEYADEKIQNAPVDNEGDHANEAKFHKLFNQFSHNEYLTRARRPPWQPFRQSPKFLTQ PPRLRRSTPRLEVNRKG >gi|222441572|gb|ABXX02000001.1| GENE 464 520455 - 520802 648 115 aa, chain + ## HITS:1 COG:no KEGG:BDP_0258 NR:ns ## KEGG: BDP_0258 # Name: not_defined # Def: MIFH/DOPD protein family # Organism: B.dentium # Pathway: not_defined # 1 115 1 115 115 223 96.0 3e-57 MPVIHTHVSVSTTAEQREALKSAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGDDSKPAA YVEVNVFGRSVPGSAWEKLTEQIMAALEKELGIPADRTYIRYTATTDWGWNGGNF >gi|222441572|gb|ABXX02000001.1| GENE 465 521169 - 522686 1932 505 aa, chain - ## HITS:1 COG:FN2082 KEGG:ns NR:ns ## COG: FN2082 COG2759 # Protein_GI_number: 19705372 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Fusobacterium nucleatum # 5 489 26 510 544 168 30.0 2e-41 MTSIEDFTSQYGLVQKIDAFGYLDYLKNDPDAPRKHGKVVLVTADTPLKASRGEGKTTTT IALIDALRERGIDAAAVLRQPSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIE AAQNLLVSFAEKAIDDGKLDDIAVPRVSEVPSRSLRQIAVDRGKGNVAERVVLTPTCELM QIVVLSRSMDEIAERVAKMIAGTKDGKAVTFGEFVDLWRITGILSDAVKPAKTETVNGSP VYVHGGPFANVSIGIPTLVSVEMACALHDVVIVEAGYGADAGAQKWLDIACREYGAQWPS AAIVVTRASTWRDDPALAWRYPFHVQRLEGLDIPTFPLINLWDGEDDQIPALQQTAKDLE FREPIIGNLYRDGGDALAPQLDAFVDAVVNGSMPATPHSHKGMALVENVRWVAENAYGVP ADRVILKDGFAESLNKAVDLCASAGIDFGSLALVAVKSPATMTDNDSAPAEERTVTLKKV EVHSGAGLVHVNLTVSLTTPMPKIV >gi|222441572|gb|ABXX02000001.1| GENE 466 522793 - 524385 2226 530 aa, chain - ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 529 9 472 472 537 53.0 1e-152 MACTTILVGKDASYDGSTIIARNEDSANGEFCPKRFIVVKPEDQPRKYKSVLSHVEIDLP DNPLQYTAVPNADLKEGIWGEAGVNEANVAMSATETLTTNERVLGADPFVELTPAKGKEG EEGYEPEVAGGIGEEDFLTLVLPYVTTAREGVERLGALLEEYGTYEMNGVAFSDVDEIWW LETVGGHHWIAKRVPDEAYVTMPNQLGIDEFDLEDAFGEQEDHMCSADLTEFIERNHLDL SVENSTPFNPRDAFGSHSDSDHVYNTPRAWYMQRFLNPYDEQWDGQDADHKPVSDDIPWA RQPERKITIEDVKYVLSSHYQGTPYDPYGKLGDQRTRHMFRPIGINRQSQLAVMQIRPYR PQVSRAIQWIAYGSNPFNTLVPFFPNVNSTPKYLEDTTTRVTSENFYWENRIIAALCDSS FADTANAVERYQEKTGAMGHRMVASTDEQIERLVGDVTDEFDAEDEIGDVQPMEPDEIIE AVRNGEAREILAAANETMAAQLKEETDKLLDSVLYTASMNMKNGFHMSDF >gi|222441572|gb|ABXX02000001.1| GENE 467 524518 - 525075 479 185 aa, chain - ## HITS:1 COG:SA0840 KEGG:ns NR:ns ## COG: SA0840 COG1881 # Protein_GI_number: 15926569 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Staphylococcus aureus N315 # 1 184 1 169 171 111 38.0 7e-25 MKISADFTVIPDAFAKAAPPENCIDGTPIVSFPFYIDALDPAVQFLHWEFVDPDSIPVCG FQWNHWSLANLPVDALMYDFNDSHALAIPADFSRTVSAMIPETVQGRTSAASPLLQGRSS DPAVTMRYNGPYPPDQDHDYYLHVWGTTAPLAGLNQGFWLNEMERALRTSGTIVDQGAIF LTGKA >gi|222441572|gb|ABXX02000001.1| GENE 468 525267 - 526916 2653 549 aa, chain - ## HITS:1 COG:Cgl1887 KEGG:ns NR:ns ## COG: Cgl1887 COG1080 # Protein_GI_number: 19553137 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Corynebacterium glutamicum # 2 543 12 551 568 346 45.0 6e-95 MIIKGVGIGRGVAVGPVIRMAQPLPEPSDAPRAEGIAAESEIARVEKSLALVNADLNRRA EEAANGDEGAKQAAPILQAIAMFASDPSLAESIKGLIQQGKTAERAVLEGFAAVEDMFRA IGGYQAERAADLHDVGQRVIADLMGAPAPGLPQSETPFVLVAEDLSPADTAALDMSKTLA IVTSQGGPTSHTAILARARGIVAVVSAAEAENLTDGTTVVVNAAKGELVVDPTEEEIAAA EAAKSRAAAAKELRGNPGSTKDGHLIPLLANVGKPADAAKALEYGAEGVGLFRTEFLFIG NSEPPTVEEQTRAYTELLSQFPGKKVVIRMLDAGADKPLPFLTPEDEPNPALGLRGLRTL RAHMDVLEGQLKALAAADAATDANLWVMAPMVADQHEADYFVKLGKSFGLKFVGAMAEVP SIALMADKVADVADFVSIGTNDLTQYTLAADRTLGSVANYQTAWHPAVLRAIKMICDAGN AKGMPVGVCGEAAADPDLAVVLAGLGVNSLSMTPVALDDVRASLAEVTFEEAQARAEAAL NGDFYHPAN >gi|222441572|gb|ABXX02000001.1| GENE 469 527260 - 527520 464 86 aa, chain + ## HITS:1 COG:no KEGG:BDP_0253 NR:ns ## KEGG: BDP_0253 # Name: hpr # Def: HPr family phosphocarrier (EC:2.7.3.9) # Organism: B.dentium # Pathway: not_defined # 1 85 1 85 86 110 77.0 3e-23 MATRTTVINDPVGIHARPAAQFSQAVTASGCTVTIAKEGGNPVPAGSILSIMGLGIKQGD SVVIDVQGADDETVADNLLNILVNAE >gi|222441572|gb|ABXX02000001.1| GENE 470 527660 - 527824 179 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no METLASAATFVIELFAEVAEAEALSVVRAMLSSQNHSKYWIIRIAAVSQSRIQE >gi|222441572|gb|ABXX02000001.1| GENE 471 527736 - 528773 1069 345 aa, chain + ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 18 340 7 332 333 126 30.0 7e-29 MARTTDNASASATSANSSITNVAALANVSIATVSRVLSGKRTKDDDIARRVRAAAAHLNY SVNYAASALRSTVTNTIGLVIPTATDPFCAQLLDEIEPVIDVDSQQLLLGIGGDQATQIQ RIESLVDRHVDGLIVLPAWGAYLSEELEHYASTLPIVQVGGRRCSSRTSMVSIDENAAME IVIRHLAERGIASVAYMAGKEISFESAELFAMFHTQVRAHHLNTEAEWNKFGDRSVQRGF DCAMRLFSEPLVQPEAVVCADDSIAFGVMVALHSLGLRVPQDVLVVGYNDSPIARTTMPA LTSVRPPFKQIVSEALRLLNDAPGSPAHISLAPQLIVRESTNCQR >gi|222441572|gb|ABXX02000001.1| GENE 472 528905 - 530059 889 384 aa, chain - ## HITS:1 COG:MT3747 KEGG:ns NR:ns ## COG: MT3747 COG0470 # Protein_GI_number: 15843256 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Mycobacterium tuberculosis CDC1551 # 3 381 7 399 404 163 34.0 5e-40 MSVWDSIVGQQRVVEQLKAIASGDPKAIAQSWLICGPPGSGRSNVARAFAAALESPDHGL GDEPTKAVQQVLAGTHPDVTVLATNKVTIGIDEVRDIITTSEQMPSTAPWRIIIIEDVDR MLERTTNVLLKEIEEPSAHTIWLLCAPSAQDVLPTIRSRTRIVNLAVPSTQAVAAFLEQN GGFEPKIAVRAARLAEGHIGIARLYAENEQVMSDRDELIVGVLGLRRASDAVLLAGNLID NAKVQAEAEVKVKAAEAEADFRRINGLGAKDRIPPKLRGAYNAIAKKDELKRQTTRLTRD VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSSITELSVRLTRGGAVRRLEDIAVA RRRLAGNGNPVLVFEALFCSLIAS >gi|222441572|gb|ABXX02000001.1| GENE 473 530056 - 530709 459 217 aa, chain - ## HITS:1 COG:DR0111 KEGG:ns NR:ns ## COG: DR0111 COG0125 # Protein_GI_number: 15805151 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Deinococcus radiodurans # 2 198 3 197 206 162 50.0 4e-40 MQGIFISFEGVDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLGGVEGS DADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQAGGRELTAGEIR DLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRTRQAFLDLAKAESQ RFRVIDASQSIDEVWSHIQDDFAQISQTKTFQSEAAQ >gi|222441572|gb|ABXX02000001.1| GENE 474 530784 - 533840 3103 1018 aa, chain - ## HITS:1 COG:ML0200_1 KEGG:ns NR:ns ## COG: ML0200_1 COG0550 # Protein_GI_number: 15827005 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Mycobacterium leprae # 6 616 17 608 608 598 53.0 1e-170 MATGSKLVIVESPTKAKKIGGYLGSEYTVMASVGHIRDLAQPSQVPAADKTKFGKFGVDV EDGFKPYYIVDGNKKKTVSELKSALKKADTLYLATDEDREGEAIAWHLVQTLKPKVPVKR MVFHEITKEAIKASLDNTRDVDDDMVDAQETRRILDRLYGYELSPVLWRKVGPGLSAGRV QSVATRLIVERERERMAFVRAPYWDVTATLEAPDADGNNVAFDSRMVSLGGRRLAGSKDF GADGKLTAAGAKDQVVQLDEAQASAIAQALEFATFTVASMETKPYRRRPVPPFTTSTLQQ TAGNRLGMSSRQTMRAAQGLYENGYITYMRTDSVTLSQEAIAAAREAVVKHFGENYLSDA PKQYATKTAGAQEAHECIRPAGAKFRDPAEIASKVPADQLKLYTLIWQRTLACQMADATG STATVRLSASTESNGEAMFQASGTVIEFPGFMKATGEGRRAFAESKKGDVAGSVEQAAQS GKSSKADKKSDDNVSLPPMNPGDALAAVAVGADGHETQPPARYTEASLVKTLEQKEIGRP STYASIISTIIDRGYVYERGRALIPSWLAFSVVKLLETKFPRYVDYEFTADMESGLDQIA SGQETGRNWLTRFYFGSGEGAAQSADEAHAGLQQQVAQLGEIDAREINTIEIGDGLHVRV GRYGPYLEDMNHLDDEGNPKRASLPDTLAPDELTVEVGHDLIENHSGGPRALGVDPVSGG TVEVRNGRFGPYVALVMPSSDAGADGDVAGGGKSKKGKSAKKAADRPKMASLFKTMSPES LTLDDALRLLSLPREIGSYEEVDAQTGEVQTVTVQANNGRYGPYLTKTGADGKSDTRSLA SEDEIFTVDLDKAKELFAQPKYGRGRGRGAAKPPLRELGVDPETQKQVTIKEGFYGAYIT DGETNRTLPKQYAPESIEPAEAFRLLAEKRAQGPSKRRGRKGAAGKGGAKKTAAKGAKAS ADQVRADRRAKVRELADKGWANTRIAKEIGSTPTTVKADVEWLAVNEGYTRPAVVPAR >gi|222441572|gb|ABXX02000001.1| GENE 475 533966 - 535045 763 359 aa, chain - ## HITS:1 COG:no KEGG:BAD_0160 NR:ns ## KEGG: BAD_0160 # Name: not_defined # Def: pre-pilin peptidase # Organism: B.adolescentis # Pathway: not_defined # 3 359 1 363 363 492 77.0 1e-137 MIMTDEFKPIIRDPHKSANMLEQPVAPVPVPQPPSDPIEQVLSPREVSEGLAKADPLTRH PRVSSIMLSVVFGLLLLAAAVGVWWLGVRTMEGQSYEDMVWSKFDAALPGWLEPVVHVFT ISTVVIATSAIMSIIALAVLIVRKRWLLIAQLAVFGGICFATAELLKPLLPRPYLINLES NPNNSAPSGHVILAAAAGVILLCAVPRVCRALVAVIGWLYAVLVGLSVIAGQWHRPTDVI MALLIVGGVAMITLAATFANGMDEPGSRASSPSVQIVGSVLLTFGVLGTLYGAYIIWQIQ PGLAMSAEWTNSGAHLSTVILTASVASLVFGLVLTMRQLTASPLTKLGLVGAPPAPPKR >gi|222441572|gb|ABXX02000001.1| GENE 476 535454 - 536632 1812 392 aa, chain + ## HITS:1 COG:Cgl2826 KEGG:ns NR:ns ## COG: Cgl2826 COG0562 # Protein_GI_number: 19554076 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Corynebacterium glutamicum # 1 392 1 391 401 446 56.0 1e-125 MTEAVEYPDLVVVGAGLFGLTVAQQAVERLGVRVEIIDVRDHIGGNAYSYMDEETGAEIH KYGAHLFHTSNKRVWDYVNRFTSFTDYVHRVYATHDGEVYPLPINLGTINQFFRAHYTPA EAKALVAEQAGELAGKDPQNLNDKGISLIGRPLYEAFIKNYTGKQWQTDPKDLPAGIINR LPVRFNYDNRYFKDTWEGLPADGYTAWMERMIDDPRIHVTLETDFFDESQPYNRKALAAA GVPVVYTGPVDRYFDYSLGELKWRTVDFKEVRYDEGDHFGCPVMNFSDADVPYTRAIEFK NFNPERAASQNPDRTVVWEEYSRFAERGDEPYYPINTEADKALYARYEELAKAEPKTVFG GRLGTYKYYDMHNVIDTALTAYEEQVEPLLKK >gi|222441572|gb|ABXX02000001.1| GENE 477 536720 - 537862 1068 380 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163782670|ref|ZP_02177667.1| 50S ribosomal protein L20 [Hydrogenivirga sp. 128-5-R1-1] # 3 357 5 367 368 416 57 1e-114 MSIRVAIAGVGNCASSLVQGVEYYKDTKDEDKIPGLMHNNFGGYRVRDIEFVAAFDVDAL KVGKDLSEAIEASQNNTIKFADVPNLGVEVLRGPTNDGLGEYYRQMIEESDAEPVDVAQV LRDKKVDVLVSYLPVGSEQADKAYAQAAMDAGCAFVNCLPVFIASDPEWAQKFRDAGVPI VGDDIKSQVGATITHRVLARLFEDRGVRLDRTYQLNVGGNMDFMNMLQRSRLESKKISKT RAVTSVVPHDMDPHNVHIGPSDYVAWLDDRKFAFVRLEGTTFGDVPLSLEYKLQVWDSPN SAGIVIDAVRAAKIALDRHLAGPILAPSSYFMKSPAVQHEDGEARRLVEEFIKGEVEGSE EQLDADVAAAKAAGKDVWRA >gi|222441572|gb|ABXX02000001.1| GENE 478 538107 - 540389 2973 760 aa, chain + ## HITS:1 COG:BH3812 KEGG:ns NR:ns ## COG: BH3812 COG0744 # Protein_GI_number: 15616374 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Bacillus halodurans # 69 664 30 618 687 254 32.0 6e-67 MVSHTRSVSSRSRSARSGGAGSNRSNASHSAPKPQNHGSHRANGPKKKQNKRKHLVLKWV LGIFAALLAAGIGLFAYMYITTEIPEPEKFALAEKTTVYYSDGTTEIGSYAEQNREIIDC AVLPDYVGNAIVASEDRSFYTNKGIDLYGIARALYTNLTTGSRQGGSTITQQYAERYYLG ETTSYSGKLREAFLAIKIAQAQDKSQVLCNYMNTIYLGRGAYGIQAAAKAYFNKNASDLT LSESAMLAGIIPAPSSWDPAVNQEQAEKRYDRVLSIMKEDGYITAQEKKEAQFPAVAEIQ QSNQMAGANGYLLTTVKNELVNSKAFTADDLETGGYKIVTTLDKGMQDEIQQVGDTRPEG MPESIQVGGIAVDPKTGSVKAMYAGNDYLTKQLNNATQATFEPGSTMKPFGLLGAAQEGV NFNTIFNGNSGLTFETTPGTTAQVPNALNTNYGYINLYQATANSVNTVFMEVNKHLGAAN LAKIAHQAGIEEDIAEDTTYNILGINGITVWDLAQGHSTIANDGVKNTLHIVDTVLTSDG SKELYKTAQENQQVFDANDCHLVQKAMQGTTTYGTAAGVSTRLGRQVAGKSGTANDEKAA SFVGYTPQLLNVWAIWNPAEDGSAQEVPSFAGYGVSSTGYPSHLFEEFMSLALQNQEVLT FTEPTDNGKIGGPDGTWGTGAQKTETRQNQEMPKAEENTEQTTPDPTQNSDQNSAGNGDG GNSGDDGDSGNNGGDSSGDGGNGGNSSGDNSGDDQSNGAQ >gi|222441572|gb|ABXX02000001.1| GENE 479 540603 - 543164 2051 853 aa, chain - ## HITS:1 COG:CC2550 KEGG:ns NR:ns ## COG: CC2550 COG3533 # Protein_GI_number: 16126789 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 9 733 49 691 786 302 33.0 2e-81 MTSHILERVPLQQVRLLPGEHFDAQQAGARYLLDLDVDRLLYPFRREAGLPQPTDADGNP VTSYPNWEETGLDGHIAGHYLSACVGFAQVADDPQPFIDRAATVVRSWHECQQSFAGDAV MRGYVGGVPDSRTVFGRLAAGDVESQNFSMNDAWVPMYNVHKTFAGLLDTWADFASIDEQ TSQLARTVVLDLADWWCRIAEPLDDETFDRILVSEFGGMCESFAELYARTGEERYHVMAD RFKDHAIFDPLAQGEDVLTGMHANTQIPKVLGWERLGAICNDEQADAATNTFWDSVVHHR SVSIGAHSVSEHFHPTDDFSSMIESREGPETCNSYNMSKLAERLWLRSGSADYINFYERV LENHLLSTINPKQPGFVYFTPMRSQHYRAYSTPQECFWCCVGSGLENHARYGRLIYALQR PAAQDSADSAAAGFASSAAETGNTVSNNAEAEATRLLVNLYIDSTFDCPEQGLRITQRAA RIEDGVDYTVTFTLESTAEHVPDTPGGLRETTLFLRRPWWAEHYGVMEATCAVCTLDPAR TNDIPEGYLPLRLRWNGVAEVVMRLRPRITVERMPDGSPWVSFMKGPKVMALASDSDDMD GEFADAGRMSHIATGPLRPLISMPIINGNPVKACAQVSRPYVHGLTVAATDVSGRTMLFD MHEFSSMHGCRYSVYLPVADDGNVCALRAQLADIDARQAASEQTVVDTIACGQQQSEIDH RYSGDNDMMGADGTLHWRRALAGGEFQYAMRGRGQAHRLEIEVIADSAESDGENTAYEVM LDGLPLQRGEHRRIDGDPTAIDVYPLPDAAETAETAENIENTGENDNADDAAIVRISASA HDGAKITALRLHK >gi|222441572|gb|ABXX02000001.1| GENE 480 543378 - 544286 1463 302 aa, chain - ## HITS:1 COG:lin0219 KEGG:ns NR:ns ## COG: lin0219 COG0395 # Protein_GI_number: 16799296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 37 302 18 281 282 198 40.0 1e-50 MSTATLSAQEQENARINAENERLRKQATRKRRIGLGFSYFALILITILMIFPLLIVVLVS FTPNAITQTWPPKLIPSQFTLENYQSLFKRLPIGREMLNTVIFAGAVTIISVFFDSLAAY GLSRVNFKGRGLLLGVLIATMMIPGMALLIPVYKLLANMGLINSYWGIIIPRMADVGGIF LLRQFFISIPKDLDNAARIDGAGEFRIFAQIILPNAVPAILTVGMFNFMGNWNDLLWPLI MTSKPETRTITAGLAMLTGHGSSVTPYGVVMAGALISALPLLVVFFLVQKRFVEGIAMTG MK >gi|222441572|gb|ABXX02000001.1| GENE 481 544283 - 545230 1403 315 aa, chain - ## HITS:1 COG:lin0760 KEGG:ns NR:ns ## COG: lin0760 COG1175 # Protein_GI_number: 16799834 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 15 308 1 292 296 199 39.0 5e-51 MAQATAAPGSAHSAVAKENKKAIQARNLRTGLLFTAPALIVLAIFVFYPAIKTFITSLTS DRINRAGKFVGFDNYVKLFQSADFWTDVKNTLVYAVAYAPIVVIVALAFALLLNRKDLKF VGFFRTCMFLPFVISLTVAAIAWQFILSPSLGLVPYWIQQLTGIAHVDLLGTRETAMAAI VFITVWKNFGYFMVIFLAGLQGISAELYEAASLDGASAWQKFRYITLPALRPTFNYVVIF GLIGSFQVFDQVFILTSGGPARATETIVYRIYTEAFGNGKLGYASALSYVLLIMTLIVGL IQLYTNNKHEKEEIA >gi|222441572|gb|ABXX02000001.1| GENE 482 545381 - 546697 2073 438 aa, chain - ## HITS:1 COG:lin0762 KEGG:ns NR:ns ## COG: lin0762 COG1653 # Protein_GI_number: 16799836 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 14 400 7 377 417 112 27.0 1e-24 MKIKKSTKALAAAASLAMMATVGLSACGGSSNDAETTADGKVKITMWHGFSEADGKTLES IVDDFNKSQDKYEIDAQLQPWSTIGETMVTKVTSGDGPDFVTTGADNGQGWSIDGTFQCV TDFYDDKDSGTDEYIENVVDQITFNIDGSEEKCGVPMGYAPTAVWYNTDMWKAAGLTDAD YPQTWDELLEVAKKLTKSDGSQYGIALPDLGWAPFLKGNGSGIYTTDGKVSINTKENKAF LEKMRDFYKGGYSVSGMDETAARESFESGQSAMVIVGPWEDQASTDKGINHDLFPVPNGD GTYVYPDGTKGSNTGSTGLYWWVTSQVGDSAKKQGIYDFFKFYNNHDNQVTWSLGSAYPP NNTTVTADELSERPLIAKIGENTSKSFIGIAGLKGGFGDIAASVDTLTSNTARTDDDIQS LLDDAESQIQGYLDEYAE >gi|222441572|gb|ABXX02000001.1| GENE 483 546950 - 547966 758 338 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase [Saccharophagus degradans 2-40] # 6 310 5 310 314 296 49 1e-78 MAVYNNPIVLQRADPWVLKVDGEYYFTGSDPEYNCIAIRHASNINDLQKAPETVVWRKHE SGPASIYIWAPELHRINGAWYIYFAGAATDFEASGLPTHRMFVLENTDDDPTTDNWVEKG QIVTPIDSFALDATTEVIDGVQYLVWAQKDPAIEGNSNLYIAKMANPWTLESEPVMLTKP EYDWECIDFLVNEGPAFLFHENKIYITYSASGTGVPYAVGLLTAERGSDLLNKDSWTKSP VPVFKTCAENGQYGPGHNSFTKSEDDSEDLMIYHCRNYTEIKGDPLFDPNRHARVGVVKW TENGPDFGVPEPDNLWTPDTTDVLPADGGALAGTPAAK >gi|222441572|gb|ABXX02000001.1| GENE 484 548235 - 549311 1514 358 aa, chain - ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 13 301 6 292 333 169 34.0 6e-42 MPKQNGANGEHVVTMREVAKAAGVSIKTVSNVVNDYEFVSQATRDKVNKAIDELGYTLNV SARNLRRGQTGIIGLAVPDLQMPYFAQLSSLVIEEAKKLGLRVIVEPTQYSREGEIEALH GSQQTMIDGLIYSPLELDQDDVDQLDVDYPLVLVGERIFTDKVDHIATENVEGAKRATSY LLQTGCKRVAVVGVHPGEKVGSAALRYQGYLEALEEAGVEFDERLVVESGMWHRSDGVRV MNALLDSGVVPDGVVALNDMLASGVMHAIQMHNLRIPEDISVIGFDNSDDSQYLSPALTS IAPGLEAVARLSVKLLKDRIDGVSPSKDLKPEQKVFRKVSSSLVVRQSTKLPTNSLVV >gi|222441572|gb|ABXX02000001.1| GENE 485 549395 - 551512 217 705 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase [Saccharophagus degradans 2-40] # 501 686 120 314 314 88 30 6e-16 MSSSYELLCYTREATGREKANNEDIAYSMHLALRADGAAQWEPLNENYGIFFAAGVPIQA ATAESRRACVAAAHFVADPFDEAHPATDAVAYGAVMPGIDITLKSLKNPYLFRLADGRFA LAATRTARGGEPDGSERSAFLLAISDDLTSFTQLGLVMLRTGGGVNRPSVAFDADASRYV ISWTSNDGKSYVATVADIVAVAESGEPIDIAEAVVTAESSRSCDCNIPNAIPGNVIAVTE EEASKLIERFGRIYNVETSVATQHIDMAASREASREAVQALAKVRADLVYSDGSGATRAV DWNKDELEAIAQDAAEGKFQPGDTRTVSGRIRQTVYPVPFAVERADPSVFAWNFNGKPMF MFIATDDTDGNCVDPNDGATHMPLRIADSIEALSDAAGGRAKEIDLLKCGDYNAEGRAMT GCFWAPELHVIDGKLSVLFMPCFDGPATNPDGTPNDRAGKPDMWTGSCHIMQLKQHSDGT DFDPREPENWTVPKPILTPTGGVLNPIQRISLDMTVISDSGRWYYAWQQVGSIWIASFDP ARPERLTCEPKQVVVPEFAWDNMIAEGPNAIVHDGTIYLIYSGSLVGIDYTTGLVTAPAG QNADLTDPNVWTKLDYPLQKSGVYNGQWQLGTGHGMWSNDEDGNLIYVFHNAEYENGRYG GRDAQVRRVHWSKEGMPILDMQAAEELNPDYADITMKIVVSGNKG >gi|222441572|gb|ABXX02000001.1| GENE 486 551614 - 553200 2309 528 aa, chain + ## HITS:1 COG:CAC0577 KEGG:ns NR:ns ## COG: CAC0577 COG3507 # Protein_GI_number: 15893866 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Clostridium acetobutylicum # 50 527 43 520 676 368 44.0 1e-101 MKFRTTAKQIAAGIIAAAMLVGTLAGCSGNSTKQSSASSKAETSTASIKRGESHDPSIVK ANGKYYIFGSHRAWLKSDDLINWSTFTNNLSTDYEKIFKDIWDGWAKQSSNPDVKGNMWA PDVIWNETMGKWCMYMSINGANYRSVIVLLTADDIEGDWTYVGPVVYSGFERVNVKKTDV PQVLGEDADITRYTSQTDTGINAIDPCVKTDDNGDMWMTFGSWFGGMWMFKLDSATGLRD YNSTYPTEANKSDAYYGVKLGGGFGNSGEGSYLLHDNGYWYLFASYGALQQTGGYQIRMF RSKDITGPYVDEAGNTAISTKAIGNNWQSDIGERLMSSIQWSGNDNANIEVSQGHNSAFV DDDGTAYLVYHTRFSGSGEKHEVRVHELLPTADGWLVAAPYEYTGTKADKKGYKTADIAG DYEMVTHDKSSYFKGPKKVTDKTSTVYRGVNKPINITLKEDGTVTGDQTGTWEAVEGANQ MTLKLTGNEGEVTYSGAFDKLPRDKDRKAVMTFSALGTNNLCIWGSQK >gi|222441572|gb|ABXX02000001.1| GENE 487 553176 - 554855 1380 559 aa, chain + ## HITS:1 COG:CAC0577 KEGG:ns NR:ns ## COG: CAC0577 COG3507 # Protein_GI_number: 15893866 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Clostridium acetobutylicum # 42 558 39 520 676 273 37.0 6e-73 MHLGVAEVSENGTTTVNAAVQSSAEPLSAAPATSPNGIEHTLANGRVAVHDPAIVEENGV YYLFGTHRRCARSTDMVHWERFDNNLSRDPYALLGDIWQAWPKQDSNPDLLGNTWAPDVI WNETMGKWCMYLSVNGDQFRSVIVLLTADHVDGDWTYVGPVVYSGFDESNLWNTDVPKVL ELEPKTDGTVGYDLTRYLSLKDTRINAIDAAPALCEHGEMWMSFGSWFGGIWMFKLDPET GLRDYSVRYPLVKDSSDPYYGVKVAGGYWNSGEGSYFIRENGWWYLFMSYGWLGRTGGYQ IRLFRSKSLLGPYVDQNGNPAISYGEIPDNQERGTGIRLTSSVQWDGGPAELADVEVSQG HNSAIRRSKDGRMFLVYHTRFAERFSEGDDEDYESHVRELLPTSDGWLVAAPYEYRGSVA VAPTGIADLTGDYNVVLHDQHTFFNGKQEDDGTYVGINRPTRYTFHEDGRITRGEIVSFF DTPDANLPRSTDGPITCGSWKPLSGAVNGFNCCASDAEIRLDDVTYIARFATLPREIDGK PVMTFSAIGNNVCIWGSQS >gi|222441572|gb|ABXX02000001.1| GENE 488 554999 - 556909 2509 636 aa, chain - ## HITS:1 COG:Rv3710 KEGG:ns NR:ns ## COG: Rv3710 COG0119 # Protein_GI_number: 15610846 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Mycobacterium tuberculosis H37Rv # 36 636 35 644 644 649 53.0 0 MGQDQSSVFDLAAVAAASNGGNNDPLLPPARYIGAPQKPSKMPYNKYVAYDKQVPFDYPE RTWPGKRLQRAPRWCSVDLRDGNQALVNPMDSERKLRFWNLLVSLGFKEIEVGFPSASET DYDFIRMLIERELIPDDVTIVVLTQAREHLIRKTYECLKGAKRAVVHFYNSVSVLQREVV FRKDKAGIKKLATDAATLCKELEGEAQGIDLYYEYSPESFTGTEPEYAVEVCNAVIDVIK PTPEHPMIINLPATVEMTTPNVFADQVEYVSNNLVPRDAVVLSLHPHNDEGMGVAATELA VLAGADRVEGCLLGNGERTGNVDLVTLGLNFLTQGIDPQIDYSNVPEIRKTVEYCNQLKI SERHPYAGNFVFTAFSGSHQDAIKKGLEARQVAADRAGADLDSFVWLVPYLPIDPKDIGR TYEAIIRVNSQSGKGGMAYLLKTNHNLDLPKRLQVEFDKVVQAYADETKKEVKDEDIWRL FKDEYLPVEESGATAAGAVVGDSKDDSLEQWGRLKLLKVSVSSGEDGSDTVLKARILDRG VNVGVDEPVEREVSGMGNGPLAAFLNALSNFGIEASVMDYVEHTMSVGTDAMAASYVECQ IGEEEDPRIVWGVGIDTSIVTSSLKAIISAINRSER >gi|222441572|gb|ABXX02000001.1| GENE 489 557108 - 558703 1250 531 aa, chain + ## HITS:1 COG:no KEGG:BAD_0144 NR:ns ## KEGG: BAD_0144 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 531 1 505 507 912 82.0 0 MTLRFNSDGTFRVLQMADIQDGPNVREDTIRLIEAAIKKTHPNLIVFTGDQIRGYDPAYI DTFLRRRGEQPGTHIRAVTEIEAKIRGIKRHPFTKALLEQPPTDDNWMIDGIGTDSPKLV KRNKRDGRNGSANKLESWAQSINRATAATILDSTRQKVRDTFAAFLGPALEARIPFAATY GNHDFQCGILADEQDDLYREFSGCMNPVAGSSPLALEPGTFAIPIEASDGSGRIAMSVMM VNSGDYADNAFDGNRGISNDCEHVGDTGKSGNTVGNAAGGRESLTSYAKYASNSRGWDLA DSDGYGTPSPEAIEWLKQVQRELGERNGDGLAVPAIAFQHIPPQEFYDCLREVPAYTPNA VEGARTFAGHCYVLNRDVCRPGSRLGEAIGCADENVGEVQALRDAGGYFALFCGHDHKNA FVGHVHDIDLGYAPTCGFECYGPKSRLRGIRLFEFRENNPVSYVTRMLTWGDLIGRYSSN ELRVFFEDHCVTDLIGIRNELRRPQVTATLLGIGSVMCAAAGHAIAKLFKR >gi|222441572|gb|ABXX02000001.1| GENE 490 558804 - 559424 620 206 aa, chain - ## HITS:1 COG:no KEGG:BDP_0233 NR:ns ## KEGG: BDP_0233 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 206 1 206 206 399 97.0 1e-110 MSKASEEAQKQLDRIVALGYPDVADMSAAAFRALARPLIRALEDSDLGTQILLVPTRELV SPESLIARTSINRMAGFTTMPPRDIASFLPQDGFEPPEGPFYLVVEPHTGTCYINREPDV ARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGSRSADGRVPSIWMSQNAPRLG AVWPNSRHTWLGNAFCVSRRGVSLFH >gi|222441572|gb|ABXX02000001.1| GENE 491 559821 - 560915 1615 364 aa, chain + ## HITS:1 COG:CAC0022 KEGG:ns NR:ns ## COG: CAC0022 COG0136 # Protein_GI_number: 15893320 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Clostridium acetobutylicum # 4 364 3 360 360 435 56.0 1e-122 MSEKIKVGILGATGMVGQRFVTLLENHPWFELVTLAASAHSAGKTYEEAIGGRWKMETLM PEFVKNMVVKNVADVEDVVKNVDFVFSAVNMPKAEIRAIEEEYAKTETPVVSNNSAHRWT PDVPMVVPEINPEHYEVIEHQRKRLGTTHGFIAVKPNCSIQAYTPALAAWKEFEPREVIV STYQAISGAGKTFNDWPEMLGNIIPFISGEEEKSEKEPLKVFGHVDEEKGEIVPFDGPLK ITSQCIRVPVLNGHTATVFINFGKNPTKEELVDRLINYTSKASELGLPHAPKQFIQYLTD DDRPQVKKDVDYEGGMGVSIGRLREDSIFDWKFVGLAHNTLRGAAGGALESAEMLKALGY ITKK >gi|222441572|gb|ABXX02000001.1| GENE 492 561158 - 561724 831 188 aa, chain - ## HITS:1 COG:Cgl0252 KEGG:ns NR:ns ## COG: Cgl0252 COG0527 # Protein_GI_number: 19551502 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Corynebacterium glutamicum # 15 188 247 421 421 133 44.0 2e-31 MSENNSQSLGDLFPDLGPEVPIISGVAHDNTESLATVRRVPNEPGMAAKVFTLLAEAGVN VDMIVQASASTGTADISFTVPGSAAAKVRDVLQEKQDELGYQSFDIDANVGKVAVVGVGM KTHSGLAAKFFNALSDKGVNVLMISTSEIRIAALVPLEQLQDAVRALHTAYGLDAEQVEA VVYGGTGR >gi|222441572|gb|ABXX02000001.1| GENE 493 561809 - 562570 851 253 aa, chain - ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 241 1 242 421 281 64.0 6e-76 MALIVQKFGGSSVADPESIKRVARRIIETKNAGNDVAVVVSAMGDTTDDLIDQALSIDSN PPAREMDMLMTAGERISMSLLAMAIHAAGSHAYSFTGSQAGFMTDAQFGTAHIKAVKPDR VRRALDKGSVAIVAGFQGVNEGGDATTLGRGGSDTSAVALAVALDADVCEIYTDVDGVFT ADPRIVPTARRIPVIDYESMLEMSSCGSKVLALRCVEYAQRFDMPLHVRSSFSHRRGTLI VPEDVDPRTLPNI >gi|222441572|gb|ABXX02000001.1| GENE 494 562809 - 563411 743 200 aa, chain - ## HITS:1 COG:SA0438 KEGG:ns NR:ns ## COG: SA0438 COG0353 # Protein_GI_number: 15926157 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Staphylococcus aureus N315 # 3 197 1 195 198 230 54.0 1e-60 MALAYDGAIQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLIDAITEVKEKIRFCD ICGNVCETSPCPVCADPRRDHSVICVVEESKDVMSIERTREYRGLYHVLGGVINPMANVQ PSDLNIAKLIERLKDSEVAEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVGG DLEYADEITLGRALAGRRAV >gi|222441572|gb|ABXX02000001.1| GENE 495 563522 - 566152 2567 876 aa, chain - ## HITS:1 COG:MT3824 KEGG:ns NR:ns ## COG: MT3824 COG2812 # Protein_GI_number: 15843342 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Mycobacterium tuberculosis CDC1551 # 3 364 1 361 578 381 59.0 1e-105 MALALYRRYRPDTFDGVIGQDQVTIPLMRALDENKLTHAYLFSGPRGCGKTSSARILARC VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR YKIFILDEAHMVTPQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP QEVMGPYLERICEDEHIEAEPGVLRLAMRAGGGSVRDTLSVLDQLMVGAVDGSIAYDSAV ALLGFTPDALIGEAVDAVVDKNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLG GERAESVLSDDAAAENMDDLRRQASALGLSALTQMADTINATLANMTGAISPRMRLELLA ARLLAGREEGMAVVASSSGVPDFAGDAGTSAAAESSRGSMAGSRRRAARHAAGNVRAQDS APVIDTPSAPVQPSVAPTNPADAVASGVASVLADVQQAMNATTSVASAAPAATSVPAPIH DDRTPDQKWDALVAALPEDVQRYVSREKVPRVLLSGDSLWIKFDKALSKYAFAKGVAKES VDGTTEVVKIVRAEVHKVFGPNVTLAPAKKLADGSESVPWSKLSPEEQSKINVQLAQERL KSATLLTANLGTAASLESSGKESASKSGQKTEDGGNAGNSNDEEGHRAEAEAAAEADPWA NPQPAAPAQPQQESDPWGSPAPVAQHVEQSIPDDDPWGAPAQPMQSQSVVASGVNDVKAP EQHTKHVAVPDISDNVDPWAVPMPDPLPTPVDDDPWGAPMPVQAGPAEPSPAPVEPETAP KHANHQHRAPRQEAAPQQGQPNADPWSQQFSAPAQPTPQVAAEDDEYSMSDESIGASSAL SVDDLTRLFEVKKVEDFGPDDAKNPRNMQQKKNLDD >gi|222441572|gb|ABXX02000001.1| GENE 496 566425 - 567021 626 198 aa, chain + ## HITS:1 COG:no KEGG:BDP_0225 NR:ns ## KEGG: BDP_0225 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.dentium # Pathway: not_defined # 1 198 1 198 199 332 85.0 5e-90 MDGQHNASATTVGDARRAQIVHAARAICLEKGFSKITISDIAGRVGMTRSLFYHYFQDKD QVADAVLDDVIDEVISQLEEWNANREVGNISKALDDVVRLTRSLIADEGPFSQRMIEDGN AGLYIKFIDRVADRIAEYICNSTVRDFEKLHGMPITNEHETFYTLIVGLISLIRLHPDIE DTVIRQVAAQTLHLNEYM >gi|222441572|gb|ABXX02000001.1| GENE 497 567068 - 568051 1576 327 aa, chain + ## HITS:1 COG:no KEGG:BDP_0224 NR:ns ## KEGG: BDP_0224 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 324 1 324 328 567 93.0 1e-160 MLFQVYGDTAIYQWIGWILVFCCLIGANELARRTKTGGVIAFLIVPAILTIYFITIYVAA AMGAEWALNNPTYVHMTSWFHYAKLYAATAGCIGFMALKYKWGKIGKSEWFKCFPFVIVA INILIAVVSDFESAIRAWGTTWVSTEGVTLYGGWHNVFNGVAGLINIACMTGWFGIYVSK KKQDMLWPDMTWVFIVAYDIWNFCYTYNCLPTHSWYCGLALLLAPTVANFFWNKGGWIQN RANTLAIWCMFAQVFPMFQDESKFVVQSVNNPNVNLTVSIIALVANVLALGYILYRAKKQ HVNPWLQEVFKGTRDYEQAIARQEVAA >gi|222441572|gb|ABXX02000001.1| GENE 498 568253 - 569404 929 383 aa, chain - ## HITS:1 COG:Rv2252 KEGG:ns NR:ns ## COG: Rv2252 COG1597 # Protein_GI_number: 15609389 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Mycobacterium tuberculosis H37Rv # 11 343 14 306 309 90 26.0 5e-18 MSETSCVNATVAVVGNPTSNKGKGAEVGKQVVELLQEAGRKHGFNVIDVTGESFDDSLAN ARNRRNEYDYLVAVGGDGMIALGANAVGCSGKPLGIVATGSGNDFARGLELPVNRVETAV DGIVGAIVRGTHIDVDMGLATSLQGGYAVDSSTGDDLVGDSDVPLRPAVNRFYAGMLSCG LDASINDRANHSRLPNGSVRYFVAAIVELTHMKRYGYHIKATLADGTVEERDIISPLLTV ANSRHIGGGIEISPYSRFSDGLLDLVWLDHVPNVAECVDAVSHAYSGKILGCKVFGWKRV RDIEITRAQEGDEPPVLMADGEYVGRLPVKVVVQDRALRVLVPPAVAESQAANTEEKVLE AIKRDHRDPVTGKTDTYYAKRSR >gi|222441572|gb|ABXX02000001.1| GENE 499 569560 - 569940 255 126 aa, chain - ## HITS:1 COG:no KEGG:BAD_0134 NR:ns ## KEGG: BAD_0134 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 126 14 139 139 134 61.0 2e-30 MKRLVKHWFAWIRGSDEGSGTISGVALIAVAAIMLGAAASAGNLLLCLHRAQNAADLASV AAANALYSGSSDPCSVAERTISGNNATIGSCTIEGEDVLVEAQVGTQMPFVSHVGKQSRA GPIVCE >gi|222441572|gb|ABXX02000001.1| GENE 500 570112 - 570480 220 122 aa, chain - ## HITS:1 COG:no KEGG:BDP_0215 NR:ns ## KEGG: BDP_0215 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 122 1 119 119 129 68.0 3e-29 MLRQWWKRHTDDADEGAATAEFAVVLPCVAAVAILVLCLGRASVVSMNCQDAAAAGARAF AVDDTGGESKARTAVMAAAGGSATVRFERGADFVTVTVQCPVVPDPTGVLPTRVTGKATR YF >gi|222441572|gb|ABXX02000001.1| GENE 501 570484 - 570771 373 95 aa, chain - ## HITS:1 COG:no KEGG:BDP_0214 NR:ns ## KEGG: BDP_0214 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 95 1 95 95 129 77.0 4e-29 MNNETPINVDGSPDLMGKAGQLLHAMRERAGKAVCLLDARMRTLTVEPEEGAATAEYAVV LVAATGFAAVLVGIMKSDAIKTLLTNIIKKALSVG >gi|222441572|gb|ABXX02000001.1| GENE 502 570993 - 571517 274 174 aa, chain - ## HITS:1 COG:no KEGG:BAD_0131 NR:ns ## KEGG: BAD_0131 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 173 1 171 171 207 70.0 1e-52 MTGLWMLTAAVCAAEAMWLKQWRPVRVPADLAPAGRVRELPLPLVLEMLSVAIRQGSSIP RALIAVGDIAAGEFGAGLRSAGEQLNKGVSWDDAWPDDGDLAVVRDAFASSWHSGASPVE RLETAVEQLDWDERSQIEQAAAKLSVRLLLPTGLCFLPAFVAVGIIPAVMSFVG >gi|222441572|gb|ABXX02000001.1| GENE 503 571517 - 572248 324 243 aa, chain - ## HITS:1 COG:no KEGG:BDP_0212 NR:ns ## KEGG: BDP_0212 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 237 22 268 270 254 62.0 3e-66 MESLSIICAVLCGLAVWLWPRRNVCDVGERAGNVVGRAGESLDEKPDGGFGGRSDGIEEA NMPAKPLPAIGCVACVASLRASVRSGATLVQAFEELGGTPFATPELTRLRITMVIRSRCP PKEQCGQVERLSGELYAACQLSLTLGCETGRCLQAVAESLKRQRLLDDLRTNAFAMPKAT VKLLMALPLLTVLLGEGMGAHSLAFLVSGVKGLACLGFALCCYTFGLIWIRALMRQDDMK GAM >gi|222441572|gb|ABXX02000001.1| GENE 504 572263 - 573252 638 329 aa, chain - ## HITS:1 COG:Cgl0301 KEGG:ns NR:ns ## COG: Cgl0301 COG4962 # Protein_GI_number: 19551551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Corynebacterium glutamicum # 3 294 57 349 377 204 43.0 3e-52 MELGPLSDIASEPGVTDIAVTCDGTVWVDRGQGMRPHALRVPFSGPQAIRDFAVRLCSQL GRRLDDACPIADASTVEGVRVHAVIAPLVPQGAAISIRLPDVVAPSLESLAENGMFPSGW MPLLEGFVERRASVLVTGGTGAGKTTLLKAMLMRCAPGERVITVEEVRELGMLNHANHVS LVTRGANMEGKGAIGLSQLICATLRMRPDRIVVGECRGGEIVDLLRALNSGHRGGMTTLH ANQVTAVPSRLVALGLLSGLNPQATAALAQDAFDVVLHVGRVGGRRRIAQIGRLEFAEGK LRGNLLAGWNGSQMRASQQWPDFVRVWSR >gi|222441572|gb|ABXX02000001.1| GENE 505 573233 - 574009 523 258 aa, chain - ## HITS:1 COG:no KEGG:BDP_0210 NR:ns ## KEGG: BDP_0210 # Name: not_defined # Def: ATPase # Organism: B.dentium # Pathway: not_defined # 1 258 65 318 318 315 63.0 1e-84 MGNVVVIDSVVAGVGTSTLAALLARELSERGLKCVLVDADLQGGGLDVLLGVENEDGSRF GEISAPLGNIDGKALLRELPIWDGVPLLACDPWKTENPQSWEVQACIHALSQVRSVVVVD MGQWNGLQDLTELRKAIRITVVELTVLGLARAKANLRAHYGSIGEHDAATQEREFLVGVQ PRGTVRDHGTTAIEEAAEYLDCDITAVIKPDAKLCSELLEGLGLRKPNRTNAKAIATLAD LIQEALGEKSISHGTRAT >gi|222441572|gb|ABXX02000001.1| GENE 506 574030 - 574575 43 181 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRDRIAQPCHTFQAQRQPVAFHRDSIPAAYRTVAQRRFCVVSAVTLAARSRRRPATARPT AAAPEEHSKKTLHYSYRRLKSFGEHHCKLNRPCGRRTRVIHNPGVLCTVIHTTTIIGVRR FPEKLPENRQTKRKARRAGLPCKNLKGRISAQQHRRNGKSIQCPFNVTTYLGHTLFVGSA L >gi|222441572|gb|ABXX02000001.1| GENE 507 574862 - 577096 2909 744 aa, chain + ## HITS:1 COG:MT3062 KEGG:ns NR:ns ## COG: MT3062 COG0855 # Protein_GI_number: 15842540 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 37 741 45 741 741 750 55.0 0 MAQIFDAPSKAILRSQIAEHIAETDKNDKRELQAGEEPLPNDRFFDRELSWLKFNKRVLE LAQDEDLPIIERASFAAIFANNLDEFFMVRVAGLKRRIDTGIAVTAASGLSPRQQLRAIS EQAHRLQDEHAHYMIDHILPDLAKEQIVLLSWDKLTAAEQERLSRYYRQQVFPVLTPLAV DPAHPFPYISGGSINLAVLVENPASGKSHFARVKIPGNLNRLVPVDDMTDDDATNVRYGF ITMENLIIAHLESLFPGMIIKEARSFRVTRNEDIDVEEDDAENLLNAMEKELLRRRFGPP IRLEISDETSPFLSQLLADQLRVSADEVYRLPAPLDATVLFELGGIDRPDLKYRSFVPTT NRQIAEVESSRAQDIFAAIRERDILLHHPYDSFSTSVQAFLAQAAADPKVLAIKQTLYRT SSNSPIIDALIDAAHAGKQVLALVEIKARFDEDANIAWARKLERAGVHVVYGIVGLKTHC KLSLVVRQEADGLRRYCHVGTGNYNPKTARIYTDLGLLTCDPVVGQDMTRLFNQLSGYAP KSSFHRLLVAPRTVRSGLIQRIRREEDAARAGKEAWIKIKVNSIVDEKTIDALYRASQAG VKIDIVERGICALKPGVPGLSENIRVRSILGRFLEHSRIYAFANSDGPQIGEGPAAGPEV WIGSADLMHRNLDRRVEALVRITAPEQIDELIKYVDLQMADSTTSWHMAADGTYVRHAKD EEGRPLVDSQEYLIKKHTRRPARH >gi|222441572|gb|ABXX02000001.1| GENE 508 577269 - 578345 821 358 aa, chain + ## HITS:1 COG:Cgl1286_1 KEGG:ns NR:ns ## COG: Cgl1286_1 COG0494 # Protein_GI_number: 19552536 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 3 171 61 186 194 84 35.0 3e-16 MRRVVEAAGGIVWRWKTGSEIAENPAIAAQKTPKEQLNSIEVCIVHRPKYDDWSWPKGKL EQGESHRHAAVREIGEETGVSIALGPYLCEVEYPLSEEGKKTRHSHDRAVDTKHTLYWMA QPISGDDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILTHSTDKDTLAIFVDRVQEG AATAQNLMIVRHAKAESRKSWKGTDANRPITPKGAAAAFALNRELACYNPTRLATSPWLR CQETLQVLSWQTERPMEHIDALTEDAFAEHPTIAWLAFLKQIQLTLETRETTAICMHRPV IGGMFDHLRGLCARKALSKQLIAKTPFMPTGTAVALFIIDTPQGPSIIDIQKVSPIVY >gi|222441572|gb|ABXX02000001.1| GENE 509 578347 - 579090 752 247 aa, chain + ## HITS:1 COG:no KEGG:BDP_0203 NR:ns ## KEGG: BDP_0203 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 247 5 242 242 381 85.0 1e-104 MHYGSGSVVPSRSAGFTNTGSPRPARPGQLDQMMADNIAGGADPAQINEMSHASAAALLD RVHHTQDAELVERVLTLVDREGVDVIAELWSSAEPDSLPGILWRLYLLRTWMRKNRESIA RLWRAGEPVATTASAIAGVDQAPTEDDIAHIADSILAGAFTGDFAVALERAAAFTDVVAL GLRIEARNMIARLKAAEGSDSSDSGISAMEKQVRTKSSRLMHTAGNLFVTAKDFRHGANL WRRGKLE >gi|222441572|gb|ABXX02000001.1| GENE 510 579053 - 579193 64 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRICGVAENWSNAFRTRPLHLPLHPPLYRYRKCFTALAPSIRDTT >gi|222441572|gb|ABXX02000001.1| GENE 511 579173 - 579346 136 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKATKLKKRESAEPRKRLSAQRPLAAAKNGARGYAWPGASSYSTDAVDRTLRRVAN >gi|222441572|gb|ABXX02000001.1| GENE 512 579425 - 580066 955 213 aa, chain + ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 3 210 4 207 209 201 49.0 6e-52 MDIHVLNHPLVDHKLTVLRDKNTPSSTFRELVSELVMLEAYEATRDVEVVDKPIETPVAP MVGKHIASPAPIIVPVLRAGLGMLDGMTKMIPSAEVGFLGMKRDEENPTQQITYANRLPD DLSGRQCFLIDPMLATGGTLVAATHYLAERGAKDVTAVCILGAPEGLKFVEENLDPSIKF KLVLCAVDEKLNDKCYIVPGLGDAGDRLYGVID >gi|222441572|gb|ABXX02000001.1| GENE 513 580180 - 581244 1352 354 aa, chain - ## HITS:1 COG:CC2157 KEGG:ns NR:ns ## COG: CC2157 COG0584 # Protein_GI_number: 16126396 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Caulobacter vibrioides # 91 349 35 255 257 99 31.0 1e-20 MSKSFVNKALLGGAVAAGAAVWAIAPRTFSDKRRNYVPSIPDVWYAHRGLHDAGSGLTAQ YANESGEYVALARRMAMKAGYGSPSVTGAIAPENSLAAFAAACEAGYGIELDLQMTADGE IVVVHDGDLMRVAGDPRRIADLTYDELTRIPLFPTDAPGAAVAAPLPGSLENPPLVTTPD SAPEGYFQHVPLFADVLKVVAGRVPLIVEYKFDDNSKWGSRDVELMEKGDALLQAYSGAY VIESFNPAAVNWYKENRPEVCRGQLSWWPQGEEKPSDPAALAKEYAAGALIFDWISRPDF VAYDWHGGNSPQVRLARFMGAVPVSWTVRSRDELAQCDDWFDHHIFEAFVPDEQ >gi|222441572|gb|ABXX02000001.1| GENE 514 581343 - 581495 83 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSDSSLPYISEMPRDETQNLPYIVEIWLGCWWLETATYDRGSRRWSPFL >gi|222441572|gb|ABXX02000001.1| GENE 515 581850 - 585263 3085 1137 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_0213 NR:ns ## KEGG: BLLJ_0213 # Name: not_defined # Def: glycosyl hydrolase # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 1094 1 1066 1238 1141 64.0 0 MSFSHISHASMKTLVAGIAAAATLCTGAIATMQTANAADASTAPSVAGHAYNDLPVGNPD VTVTQIDNSALPATLRNPIGQNEGTNTPNDLSQNYYSADASTLEYDGKLFVFTGHDEAEP TYGSFNMKDWGVYVTDNPESGKWTHYKTIAKADLFDWATGDGAYAGQVVVDDAGTADTAD DWFYYYVPVKDKNAAAGADPFSIGVAKSKSPLGPWVDAIGAPLLTTMQTQIETIDPAFFV DNDGTGYLHFGTFNSELAVKMQRDANTGRTSYVAVETMDGTADGAPKIYNMRDADALANI PDYDASKDVLGSDYANQVNASLTLGNNGGAYANGPKGFFEAAWVFREGDTYYNVYDGGKP GSGVATCVESNYQACVQYSTSASPLGPWTYQGVIVESGSSTTMHPSIQRFGGKWWVTYHT GDKTGGTDFRRAVCIDEVTWNGGRMNAVSHPTKAERLQPSRNVAPYASVDATYTETPAYK GSVNDGRVLETAVVPPNHWTNYRKMPQTQSSDSLIYQWNGAVRVNGSKVWFDTDANALRA PASWKLQYLDADGSWKDVPNSSEYGVDTGKNAPNEVTFDAVTTTALKLDMTAQAVDGGYA SVGVPEWEVYAQQGAVVAERPADVYAKTGDAPELSNTVKVAYGSETVETPVLWRTVSASS YAQAGEFTVQGVVAGIETKQQADDLAAGNVAVTVHVSDDYVKPADTIAPAVRVALAGTAG NDGWLVTSPIALITASDNAAAPIAKLELAVGDGAWVTVGTNVNTAVKAVTGEGIVSVRAR ATDAAGNVSEIAAAEARVDATAPTVTASVDTVSRTMTLTASDGAGSGVKTVEYRVGNGEW QQYEEGAAITASSSKRETVSYRASDIAGNMSAAGVKDIPSDTSVPLAGYIEQDAVATDVD KKASSWTAGVAALNDGKTIPGDCTVDNACIWGTWPNTGEMKLDYEWDREVTIDSSRVQFT SDGGGLGMPASWKLQYWDAGTNAFVDIPDATYTLVTNAPGAYGTDNGGWSEATWTDAVKT TKLRMVIQSGSASPAAAEWQVHAPEPTPDPTPDPTPEPEPEPTPTPKPTPDIDNNGKQDG NNAEPSAKPQSSQQSQSQRKKKLSSTGVATTAIVIAMTVLATAGCCIFVAKRGKLRN >gi|222441572|gb|ABXX02000001.1| GENE 516 585373 - 590955 6268 1860 aa, chain - ## HITS:1 COG:no KEGG:BDP_1701 NR:ns ## KEGG: BDP_1701 # Name: bbgIII # Def: beta-galactosidase BbgIII (EC:3.2.1.35) # Organism: B.dentium # Pathway: not_defined # 14 1801 1 1779 1906 2491 74.0 0 MTPSTRKKGIVTSLGVLTAVATLLSGGVMTAYANDALANPNSAMGYPSFKGAADPIPGTG VAFDPSTSYLKQVFDADVANGAGTDTAHDFWIDKMLTRTGTAPNGTGTNDAGDYNYAGAD KNEYLFSRGRAAFMYTHTPEALGFVGDVAYWDQTGNDGFTVEVSIGGSKQTLRENTDKRK QTPSYFTTEFTNGDKTITVTEVKYITYTNVMVANFTITSTTGGDVTLTAASPFAQDGNDG DTELTGRFNVKNDLTTIYPRFSGNGFTVKDGKLASTLTLEANVPQTTKLQLGLIANELPD STAEYEARFNGDLTDPAASYKDSVTTYNQWWVDNIPYVETQEHNIDKTVFYRWWLSRFNM LDANMPGNTFQYPTSIEGVLGYNNQIVLTSGMFINDTKWFRNAEYSYGTWVSAGQTAKKG QSGYYYYHDNPGDPANWNHSYTQYITKAGWDSYKVHGGPSSLAEALGDYGSEDVKGLLNS QSEPDSNDNQNSNGNKLIDWSWWSMTGNDADAVSFSEPGRSGQRMDRADGSANMWANANA AAQAYKAAGDTEKAAEMQQIADAIKQDVLDNLWDSDSKLLLHKWLNDGQFAKYKELNNYY PYSEGLMPIGNDDYDSALRLFEDADEFPIFPFFTANQADKKALNFPGSNNFSIINATPLL QIYSAGIRDYNAADNGYITNESFKKLLYWVAFSHYQGGDNQYPDQNEFWNMDNNSAGSTI PEKNADASKNGGKITYRSWIHHTQLGTTNWTIVEDVAGMVPREDNKIELNPIEIPGWNHF TVNNLSYHGQDLSIVWNNDGTYNAPKGYTLYVDGNAVFTSDKLAHLIYDPASGTVEVADD SGAVITGATTATMPNANEVTYASNSRVTQIFAQSGQNVDEASKSQANVAKDADVEATYET KGYPATNAVDGKNVMESFWGTKGSKNAKDSLTVTFKNGVQNIDDVRLYFYQTSSSQTIAG YSEPSVYTLEYQDEAGAWHVLPNQVRTPTYAGANYNRVQFSKVVAKAIRATFTPQAGQAI GLKEIQAYETDIVPEGEPTNQAPSVDAYIASSTSSGAQLVGTVKDDGLPSDTLTTTWEQV SGPENGEAKFVDATAANTTVTFNREGDYVLKLTAFDGEKTGFKEVTVHGIPSDGTVNVAS QSTASASFTNPYQAKDNAKKVIDGQVLYTNTPNETWNNWGDNTGTEPWLQLAWDGTVPLK KAKLFFWTDGGGVPMVKSWKLQYADENGDWQDVKLAAGQSYTTMQGEGNEVRFAETVETN KLRVLFPKGAIVGATEFEAYALDPVSVDGVNRMVQTGSKAADVNLPKTVSASYTDGSRRD LSVAWDAITDDQLASDSEFAVSGTVIGALAGTKATIGVRSDAQSQTAGAAQPIEQTVYQN SKSVALPSVVPVRFPNGMLDDRTVMWDEASVAGVRLDTIGDYEVSGTAEGSSSQAKITVH VVADPNGGADPDPEPTPDPKPEPDTPLTGWIEGRAIDTTVSAEASWSPASGKLNDGVLVD DTWPSDDDADVNGRVWGSWGQASAGMYAQYTWSKEATVDSSRVQFWANFAERNDAKGGLD VPDSWKIQYLASDGIWKDVENAQYSTVRNSPASRASDDAQGWSVATFTPVKTTSLRLVLD PPTAEGVTFGLAVAEWGVHAAESTPDPEPTPDPDPTPDPEPSVDKSRLESTINAAGSVQQ ANFTPNSWKAFSEAMGNAQKVYADESATQDQVDAAIKQLEEAQQTLVKKADTTELKTVLD QAQGVSGDLYTEASAKKLAEAVDAASKVLNDENATQADADAAVKQLTEAIAGLELKPAPK PDDDKTDPKPNAKPGNKPVSKSEVSAAISSTGSNVIGIAVVGMIVLLTGAAIMLTRRNRD >gi|222441572|gb|ABXX02000001.1| GENE 517 591362 - 593335 1674 657 aa, chain - ## HITS:1 COG:STM3679 KEGG:ns NR:ns ## COG: STM3679 COG3533 # Protein_GI_number: 16766964 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 3 655 11 648 651 487 39.0 1e-137 MNVTITSPFWKQRRDQIVESVIPYQWGVMNDEIATEVPDDPAGNQLADNKSHAVENLRIA AGDETGEFHGMVFQDSDIYKWLEEAAYALSYHPDPQLRELCDKTVDLIARAQQSDGYLDT PYQIKTGEWAHRERFTLIQQSHEMYVMGHYIEAAVAYHEVTGNQQALDVACRMADCIDAN FGPEDGKIHGADGHPEIELALAKLYDATGEERYLNLARYLIDVRGQDPQFYAKQIAAVDN DYIFRDLGFYKPTYFQAAQPVREQQTADGHAVRVAYLCTGIAHVARITGDQGLLDAAHRF WNNIVSKRMYVTGAIGSTHVGESFTYDYDLPNDTMYGETCASVAMSMFARQMLLLEPNGE YADVLERELFNGAIAGISLDGKQYYYVNALETSPDGLDNPDRHHVLSHRVDWFGCACCPA NVARLIASVDRYVYTERDGGRTVLAHQFIANQASFDSGLHVEQRSDFPWNGHIEYMVELP AEAADSVRFGVRIPTWSADSYALTCDGVAVKTAPENGFVYFAVAPGTALHVVLDLDMAVR LVRANSHVRCDAGRVAVMRGPLVYCAEQADNAGDLWTYRLADGVDVADATVTFESDLLGG VDAVTLPAVREAADAVDAPLYMSAQRDASDERTSLKLVPYYAWANRELGQMNVWLRS >gi|222441572|gb|ABXX02000001.1| GENE 518 593466 - 594284 1243 272 aa, chain - ## HITS:1 COG:mlr2246 KEGG:ns NR:ns ## COG: mlr2246 COG0395 # Protein_GI_number: 13472069 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Mesorhizobium loti # 17 271 23 285 285 196 41.0 4e-50 MTTPLWKRVIVYILEGLLALVFISPLIWVVVCSFSPQPGSAQSKGWGVNNYLTLFGYQEG LPKYLFNSVVVTLVAVVFSVVVCTLAGYSFSRFDYPGRNLGFMVTLSILMVPYASLLIPL MVWYKDIGLNDSLLGVGLVITLFQLPMSTFIMRNAFDAIPKDMEEAAMVDGCNSLQSLIK ILVPVVKPSMVTVGLLAFLEAWNNFMIPLYLSSSSNATLPLALVNMRQQTMGVIDYGATE AGVVILMIPAAILFLALQKYYVKGFMAGAVKG >gi|222441572|gb|ABXX02000001.1| GENE 519 594304 - 595230 1345 308 aa, chain - ## HITS:1 COG:mlr2245 KEGG:ns NR:ns ## COG: mlr2245 COG1175 # Protein_GI_number: 13472068 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 1 304 1 303 309 186 38.0 4e-47 MTTVSKNAAPVKTHRSKAKAEATRRGLLYALPDWLMIIMLFFVPIVLLVIMAGSRWSLMG GNRGWNFPENFVKVFENKLLGQSVLFTLEYTVIVTIFLLVLGLGLALIVQESTKWNNMLR TCFLLPSATGLASASLLFYALYSPQVGPVTKILSFFGLMDEGGSVLATGQSALWATIIVI VWRFSGYYMLLMMIGLQAIPGDLYEAARMDGAGTWRIFRSITLPLMKPTIVMCLIYCVTG SILAFDQFFILTKGGPNNSTMTVVQLIYNFAFDSKKDLGMAAALSLIVLAALVVINSIQM RGMRDNTK >gi|222441572|gb|ABXX02000001.1| GENE 520 595292 - 595534 136 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351289|ref|ZP_03742312.1| ## NR: gi|225351289|ref|ZP_03742312.1| hypothetical protein BIFPSEUDO_02881 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02881 [Bifidobacterium pseudocatenulatum DSM 20438] # 23 80 1 58 58 109 100.0 6e-23 MAKRLDMRLEVRFRLVRPLKSAMKTDIVFEVLSIFMADHNCGLSIFVFDIQLFDIQLFLS YVNRGKEKKEEKFVFSGSPH >gi|222441572|gb|ABXX02000001.1| GENE 521 595528 - 596853 1935 441 aa, chain - ## HITS:1 COG:mlr2244 KEGG:ns NR:ns ## COG: mlr2244 COG1653 # Protein_GI_number: 13472067 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 45 425 20 392 415 189 34.0 8e-48 MVSFNKVTRVIAGIAATALLIPMAACGGGSSSGGSAAPADIPAAGTDDGTEITLWTRSPL ERQAKNAVKAYNASHKNQVKLEIIPNDDMEGKVGGASQTDSLPDILAGDVVRIPYWASEG IFTDITKQIDGLDNKSDLQQGHIEAGTVDGKEYTLPFITDVSVMVWNKNLYKEAGLDPEK GPSSIDEFVEQAKAVAALNKDGVAGSYLAGQSGGALVFDLFPSVWADGESVMNADGTEAT LDNDSMKAVLDAYKELANTTNGLGAGSKEETGATWTAPFANGNIGVMPYPNTSSTALFEA EKDGGFEVGVTPIPGTKEGKTSTFLGGDAMGISKDCKHVAQAWNFLAWLMSDDAQKEVFA ANGDTASNIQTLKTSYDDADPRVQTINSVIIDGNGQTPKSAAFNEAFNAAGSPWQLLIQN AVWGDGDLKADNQAITDVLGQ >gi|222441572|gb|ABXX02000001.1| GENE 522 597340 - 598359 949 339 aa, chain + ## HITS:1 COG:mlr2242 KEGG:ns NR:ns ## COG: mlr2242 COG1609 # Protein_GI_number: 13472066 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 12 339 1 330 331 223 40.0 3e-58 MATADTHSTARLEDVAALANVSLATASKALHGKPRVSEDTRERVMEAARQLNYSPNKLAQ SLASGRSGTIGLVTSDLQGRFSTPILIGAENELRAQSTSVLLANARGDDALERSHVEKLL SLKVDGLLIVQCETNPRPSLGRDWGVPLVYVYGPSTDTNDCSVTCDNVDAGRMAVNHLIS CGRNRIAIIGGDETYTASTDRTKGALEALAEVGLEPAGPIRYGRWDENWGRAATRLLLDQ GVKFDAVVCQSDQLARGCIDALKSQHLRIPEDVAVIGHDNWDVLTKSSRPPLTSIDNETE LIGRKAARYLMDAINGQPHHGTEYLPCRLIQRESTLPLD >gi|222441572|gb|ABXX02000001.1| GENE 523 598362 - 600215 1770 617 aa, chain - ## HITS:1 COG:CAC0033 KEGG:ns NR:ns ## COG: CAC0033 COG0661 # Protein_GI_number: 15893331 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Clostridium acetobutylicum # 113 615 34 531 532 284 30.0 4e-76 MSLNSPIEPDAARPESVEPVTLSDRVNAVINPTADPSPDAAAATAAKSAEKTGMPQSRKQ NSATFTQPETIGLFGSRKDSFSQRYHLTRRGKLKRLAQIAQIVNQFDIVHGLTPIKMRLM FEALGPTFVKVGQILSMRSEILPQSFCDELSKLRADADPMPYGTVLQVLEDEYGRPASEI FDHIDATPLGSASLAQVHRAKLTTGEDVAVKVQRPGVRETMAQDVSIMRTIARIAAKTMR SAQVVDLSGVVEELWDTFESETDFLIEARNLAEFKRFCERYKYMDCPKPYPELCTEHVVV MDYVEGISVSHPNELIEAGYDLKEIGTKLVDNYATQVLDEGFFHADPHPGNIMVRGGQIV LLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPALADGLLRFAGAEADSEDYPALLADLDVI VKEFGTVDLAELDIAAMLTALTQMAQRHGIEVPSTVTTVGRALVTLEGLLDEFIPDVNMI QIISDHIAASTSKKDFAKDEAKSLVIEGHQALHSLLAAANELKVASRMLTRGQLRVNMEM VGSQEPIHLLANMVNRLTMALIVVGLFIGSSIVYYAGIKPVIFGIPIVGFLGYVIAFVLS VWIVFDIYFKGRSNKKR >gi|222441572|gb|ABXX02000001.1| GENE 524 600004 - 600468 129 154 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVSGCVKVALFCLRDCGIPVFSADLAAVAAAASGEGSAVGLITALTRSESVTGSTLSGRA ASGSIGEFKDISLLANVGRITMSRIHRGLRPAYFMRFARFMRIARDCSHVSHGTQVSHDA QVPHSKSPSERDATRRRRWERLNVTRLWLQASLP >gi|222441572|gb|ABXX02000001.1| GENE 525 600434 - 600682 451 82 aa, chain - ## HITS:1 COG:no KEGG:BAD_0119 NR:ns ## KEGG: BAD_0119 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 82 28 106 106 93 81.0 2e-18 MADFDFGDGLRKVFLAGVGALATTVEKSQEIVDDLVKKGELTVEQGKALNAELKHKVAEV KEASDAKAAEEVKEAKPEAKAE >gi|222441572|gb|ABXX02000001.1| GENE 526 600881 - 601639 961 252 aa, chain - ## HITS:1 COG:slr1742 KEGG:ns NR:ns ## COG: slr1742 COG3442 # Protein_GI_number: 16330374 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Synechocystis # 10 250 8 254 256 147 39.0 3e-35 MSQTIDIVSLYPKDMNIYGDSGNVLTIQRRLALYGYEPHVHAYNQSDAWPEHVDMILGGG GQDTGQKKIIDDFFKRADLLRSLAADGTPMLMICGLYQLFGEYFETVDGSRLDGIGVIGA YTVGQEVRMIGNLTEHSADFGDIIGYENHSGQTFLREGVQPLGTVDADGTGNNGEDHTEG ARVNNVIGTYMHGSLLPKNPALADFLIRTAVERRYGSFDPVAAGQTQAQRAELDSINTIA GNARRVAMSRPR >gi|222441572|gb|ABXX02000001.1| GENE 527 601745 - 603271 1443 508 aa, chain - ## HITS:1 COG:SP1589 KEGG:ns NR:ns ## COG: SP1589 COG0769 # Protein_GI_number: 15901431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pneumoniae TIGR4 # 19 496 20 437 447 169 29.0 2e-41 MAWNSFATPLIGKAVRAASRLAHGGGSAFPGKIVEQIDPQFLARTLQQLPLGVVLVSGTN GKTTTTRMVASMLESLGLKVFTNPTGSNFTRGVVSSLLAEVSLGGKLDADIAVLELDEAY AVHFVKQVQPDYCLLLNVMRDQLDRFGEIDNTARLLSKAAEATTGTVVLNREDPRIARLA DVTHTEDGVEVRYFGLDKSLRSFFPSDDDMCTTVDTESAADTEASVGIDLSESAESDENI EIGDASAIAKTGEHAEKSENAESAEQLPADVTLLAVGDHRASFGIDGETYETGVKLEGVY NLYNAAAALAAVRAVVADAQAMFLPFEENVTDELLRQVGISQRMIDFAHSTTQSMIDAAS EVTPAFGRGEVIDVNGSPVELLLVKNPMGFRLSLASFAPEGCDTMIAINDEYADGRDMSW LWDVDFSSLRGTGVSMVSGVRAWDMALRLEYDQVPVNSVNTELEEAVSTFVNANPGTPKH IYCTYTAMLKTRAALGRIAEVADAGVGK >gi|222441572|gb|ABXX02000001.1| GENE 528 603274 - 604722 1437 482 aa, chain - ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 4 474 43 509 510 461 50.0 1e-129 MAESNSWNNGLNQGQNRGFSGNGSTSGTSGAAIRDAIFDRVPPHDDAAEMAVLGGMLMSK DAIGEVSQMIDITDFYQPRNQTVYEAIINLFSASQPVDAVLVANQLLKDGDLEKVGGSDY LHSLVASVPTAANATFYADIIHQRAILRNVIAAGTKIAQLGYTAEGSQAEDVVNLAQAEV YEMSTGKVRQDYAPIGTVITDTLDQIDRLQNGEVSKGVPTGFRDIDEVTQGLQPGQMIVV AGRPAMGKSTLGVDFARSAALHHNMTSVIFSLEMSKNELAQRIISAETNIPLAAMRRAED ITQERWNILNNLQDKLQNAPLFIDDSPNMSLMEIRAKCRRLKQTNDLKLVVIDYLQLMTS GKAVESRQQEVSDFSRALKLLAKELEVPVVALSQLNRGPEMRQDKKPQLSDLRESGSIEQ DADVVFLVHRPDAYDKEDRPGEADIIMAKHRNGPTDTFNLAFLGAYSKFKDMPQDYQSQQ EV >gi|222441572|gb|ABXX02000001.1| GENE 529 605141 - 606967 1329 608 aa, chain - ## HITS:1 COG:MT2986 KEGG:ns NR:ns ## COG: MT2986 COG2844 # Protein_GI_number: 15842461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 61 608 58 573 808 243 33.0 7e-64 MTSAVDGLKQRFMNISQPDADGVYRNGAAKRKARTDLAMDCLTKLWQEACQTVSFDVPQV GIGLGAVGSLARGQVGPSSDLDLVVIYELHALTDQQLNELANKLWYPIWDSGLDLDQSVR TRAQCEAVTDHDLPAAMGWLDVVPIAGDTQLIESTAVSILERWRRAARKRLPELLGSAKS RLDEFGRMAYGNQPDIKESRGGLRDSVLVSALAASWLADRPHGQYDDAVERLLDVRDCIH LVAAKDTNMLLAPYQARVSAMLGLADPTLPSGEREAKSIDDLQTLLARVGRQIAFSLDST ASRAEHSLTHEKPRFAFFQVFQPRGGGKRQAPTFDVVAPGIAKHEEEIVLAPGADPKSDP CLALRAAVAAAEFGLPIAPGTLQNLKSCPIDDRTWNDESRSLFLRLLASGPALLQVWEEI DFVDIPGRLIPEWLAIRNRPSASAAHRYTIDRHSVEVVTRLGRETPRGNRYDDRHYQALL LAGILHDIGKRPWVADHAAEGARHASTVLKRMGFDRDIIWWVTLLVREHLTLSEFATGQN PNDPNVGDELASRLDHDPLLLDMLFDLTRADGSSLGATSGETISKQYGWSKWRETLVRTM YNATRYHM >gi|222441572|gb|ABXX02000001.1| GENE 530 607151 - 607489 529 112 aa, chain - ## HITS:1 COG:MT2987 KEGG:ns NR:ns ## COG: MT2987 COG0347 # Protein_GI_number: 15842462 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Mycobacterium tuberculosis CDC1551 # 1 112 1 112 112 135 63.0 1e-32 MKLITAIIQPHKLDDVKEALAAAGVHGLTVSEANGYGRQRGHTEVYRGAEYTVDLIPKIR IEVLSDDADAETLVGVIVKSAGSGTIGDGKVWVAPLDSVTRVRTGETGSAAI >gi|222441572|gb|ABXX02000001.1| GENE 531 607491 - 608786 1711 431 aa, chain - ## HITS:1 COG:Cgl2012 KEGG:ns NR:ns ## COG: Cgl2012 COG0004 # Protein_GI_number: 19553262 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Corynebacterium glutamicum # 6 421 26 450 454 382 55.0 1e-106 MGQLDSGNAAWILTSASLVFLMTPGVAFFYGGMVRAKAVLNMMIMEAAALSVTMVIWVLW GWSIAYAGTSVGGVFGDPATGFLLKDSMVSDGGVFTSASLNSNNYPVSVDVAFQSAFAMI TVALICGAIAERVKYSTWMIFVALWITFDYAPLAHMVWNGGLLSADGAISQAIGAAAHDF AGGTVVHINAAVAALVIVLIIGKRKGFGTQPFRPHNVPFVMLGAFLLWFGWFGFNAGSAF AANGTAGYAWVSTSAATAAAMLSWGFTEKIRTGHYTAMGAASGIVAGLVAITPAADVVSP LWAIVLGAIAGVLTCLACGLKFKLGYDDSLDVVGVHGVGGFTGTVLIGFFGEGTGLFAGG DWKQLVVQLLVALVAIIWSAVVTGIIAFALEKTIGWRVTEAQEVGGIDLADQGERAYDFA GTASSVLKEVK >gi|222441572|gb|ABXX02000001.1| GENE 532 609109 - 610371 522 420 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157804145|ref|YP_001492694.1| 50S ribosomal protein L32 [Rickettsia canadensis str. McKiel] # 121 419 7 301 303 205 38 2e-51 MDTNVIIAIVAVVVIAAILVIGGWWLGKTRKNAVNKSTEDAKAAADARLAAEAKSAAADS STVKPSVDSNVDAAEKAPAESQQKSSAQASSSETAAPAPATEAKPEPVHETPEAAGTRMQ RLKARLSKSGNPFGKALFNILAKDQLSEADWEDVEDTLLLADVGAEASEQLVEELRNDAR ISGQSDPAEVRAALKDKLLKLVGTDTDRRLNADKEGANKPNVIIMVGVNGTGKTTTAGKL SRLLVSEGKQVMLGAADTFRAAAADQLETWGAKVGVPVVRSDKDGADPASVAFEASAKAK EENVDVLIIDTAGRLQNKANLMDELGKIRRVTEKNLPVDEVLLVLDATTGQNGMTQAKVF AEAIGITGVVLSKLDGSAKGGIVISVQKELGVPVKLVGLGEGPDDLAPFDPEGFVDGILA >gi|222441572|gb|ABXX02000001.1| GENE 533 610538 - 611347 933 269 aa, chain + ## HITS:1 COG:MT1047 KEGG:ns NR:ns ## COG: MT1047 COG1309 # Protein_GI_number: 15840447 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 5 205 4 202 202 204 53.0 2e-52 MANTSRMTSYQRREQLIEIGRSLFASKGFEAVSVEEIAATAKVSKPIVYEHFGGKEGLYA VVVDREMRALTDTLINALSDPQAHPRQIVERTALALLTYVEENAEGFRVLTRDSPKTDPA GSFNSLLGDISIRVEDILTEAFKRQHLPAKGVPYYAQMLIGMTVYTCQYWADQRKLSKEQ LAAHIVNLAWHGLSRMEAKPELRFESDKAAKEAEKQERREIKEIAKRERKAAKEAQSQNN TESPAGQNAEQNTEQGAAGSQDTQAEQQS >gi|222441572|gb|ABXX02000001.1| GENE 534 611649 - 612680 1187 343 aa, chain + ## HITS:1 COG:CAC1488 KEGG:ns NR:ns ## COG: CAC1488 COG0463 # Protein_GI_number: 15894767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 5 343 2 338 338 279 38.0 6e-75 MQEKKTLTFVVPAYNMTEYLERCVMSLIAAKRNDDIEVLIVDDGSSDGTLEMAQKFEARY PGIVRAIHQENRGHGGAVNTGIAAANGMYVKVVDADDWVGPEALEQVMAVLREEADSTEP IDMLVTNYVYDKVGKRNKHVVNFRHAMKAGERLTWNDLGHFGLAEYILMHALTYRTSVVR ESGMQLPEHTFYVDFIYAYQPFPWVKTMKYLDTPFYHYFIGRDGQSVQTDVMIRRVDQLR LVNQCMVHATPERDTVPDGLYRYMIHFLAIESSVASVFMILSRDPENYEKKKDMWDDIKA YSPTIYKDVRKKAMSRALNLRGSIGRFVIRKGYFVAEHVVGFN >gi|222441572|gb|ABXX02000001.1| GENE 535 612893 - 614548 1472 551 aa, chain - ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 548 9 472 472 484 46.0 1e-136 MSCTTILIGKKASYDGSTIIARDDDSGSGRYDPKKFIAVAPQDQPRHYRSVLSHVEIDLP DNPCRYSIVPNVLPNRGILAEAGVNEHNVAMSATETIAVNERVLAADPLVELQPANKAAN TPEIPGGIGEEDIITLVLPYVTTAREGVARLAELLETYGTYESNGIIISDVNEIWYVETI GGHHWIARRVPDDCYATIPNQLGIDDFDFDDAFNTQREFMCSADLREFMDAHHLDRTMSA AASSGFGFQPTSAFGNVNMNGGSNSSSGAALRRNHFNPRTAFGTATTKDRIYNTPRAWYM QRYLNPSEDWDSPAARYTPASDDIPWCRVPENAVTLEDVDFLMSAHFEGTPYDPYGTLGT SESRHRYRPIGINRTGHMVAMQIRPYAPETSRSIMWISYGSGPFTAATPFYANVDDTPAY LRDTTPEVSTNNLYWANRLIAALADAHFYETSNAIEEFAESARAYGHRLVERTDAELREM TAQSSASESQKSTETAEITEDASIAIIARLQQSNEEMAEYLRTHVTKLLNDVLYTSSNLM HNSFAMSDRWN >gi|222441572|gb|ABXX02000001.1| GENE 536 614783 - 615019 156 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKPLETLDSKGFSIPAVLAPDAIRRAHIVRTPNTDCHIIIRTGKHPAIATVGFLPYRQDA LTGWHLADSKRLPPIQRQ >gi|222441572|gb|ABXX02000001.1| GENE 537 615209 - 615911 1050 234 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351307|ref|ZP_03742330.1| ## NR: gi|225351307|ref|ZP_03742330.1| hypothetical protein BIFPSEUDO_02900 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02900 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 234 37 270 271 376 100.0 1e-103 MSFSKKIIAGVAAVATLAALAPAVAMAEGDQNQNSAVSTQSDSTIVEVSFYAADGTLIQK TGYQKGTAFSMFATGITAPTVEGKTFTGWAYSEGPMLKDTDPVCGNIAVYATYANTPAQD DNTQYTVSFYAGTDKLIQTVSYYAKDKAKFSTYAAGIQAPAVEGKTFTGWGFASNDGNVP VDPNAEVTGNWAVYPMYKNTPASEDKTLNTVSFYNTKNELIQTVSYYAKDHFKF Prediction of potential genes in microbial genomes Time: Tue Jun 28 19:49:47 2011 Seq name: gi|222441571|gb|ABXX02000002.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont1.1, whole genome shotgun sequence Length of sequence - 570758 bp Number of predicted genes - 483, with homology - 445 Number of transcription units - 261, operones - 116 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 191 126 ## gi|225351308|ref|ZP_03742331.1| hypothetical protein BIFPSEUDO_02901 - Term 233 - 276 12.1 2 2 Op 1 . - CDS 302 - 1312 819 ## BLD_0377 hypothetical protein 3 2 Op 2 . - CDS 1312 - 1593 230 ## BLIF_1192 hypothetical protein 4 2 Op 3 . - CDS 1599 - 2270 924 ## BLIF_1193 hypothetical protein 5 3 Op 1 . - CDS 2407 - 2904 373 ## BLIF_1194 hypothetical protein 6 3 Op 2 . - CDS 2901 - 3155 235 ## BLIF_1195 hypothetical protein 7 3 Op 3 . - CDS 3152 - 4306 802 ## BLIF_1196 hypothetical protein 8 3 Op 4 . - CDS 4303 - 4458 135 ## BLIF_1197 hypothetical protein 9 3 Op 5 . - CDS 4455 - 4646 85 ## gi|291457746|ref|ZP_06597136.1| conserved hypothetical protein 10 4 Op 1 . - CDS 4822 - 5649 360 ## gi|225351317|ref|ZP_03742340.1| hypothetical protein BIFPSEUDO_02910 11 4 Op 2 . - CDS 5646 - 6014 252 ## BLIF_1199 hypothetical protein 12 4 Op 3 . - CDS 6014 - 6256 155 ## gi|225351319|ref|ZP_03742342.1| hypothetical protein BIFPSEUDO_02912 - Prom 6277 - 6336 5.1 - Term 6336 - 6366 0.3 13 5 Tu 1 . - CDS 6397 - 6900 268 ## gi|225351320|ref|ZP_03742343.1| hypothetical protein BIFPSEUDO_02913 + Prom 6861 - 6920 5.2 14 6 Tu 1 . + CDS 6940 - 8007 1059 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 8040 - 8081 11.3 - Term 8014 - 8079 16.4 15 7 Op 1 . - CDS 8127 - 10448 2660 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 16 7 Op 2 . - CDS 10602 - 11078 519 ## COG0756 dUTPase 17 7 Op 3 . - CDS 11078 - 11371 480 ## BAD_1004 hypothetical protein - Prom 11428 - 11487 2.7 18 8 Tu 1 . + CDS 11521 - 12576 559 ## BDP_1401 putative DNA binding protein + Term 12815 - 12848 1.1 - Term 12387 - 12420 -0.9 19 9 Tu 1 . - CDS 12579 - 13766 808 ## COG1524 Uncharacterized proteins of the AP superfamily + Prom 13794 - 13853 2.3 20 10 Tu 1 . + CDS 13891 - 16578 2494 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 16596 - 16664 16.5 21 11 Op 1 . - CDS 16711 - 21324 2232 ## COG1201 Lhr-like helicases 22 11 Op 2 . - CDS 21354 - 21569 231 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 23 11 Op 3 . - CDS 21571 - 22104 418 ## BDP_1407 hypothetical protein - Prom 22136 - 22195 4.7 + Prom 22137 - 22196 3.7 24 12 Tu 1 . + CDS 22261 - 23748 526 ## BDP_1408 hypothetical protein - Term 23587 - 23621 0.0 25 13 Tu 1 . - CDS 23733 - 24938 1181 ## COG0477 Permeases of the major facilitator superfamily - Prom 24980 - 25039 2.1 - Term 25082 - 25124 1.2 26 14 Tu 1 . - CDS 25145 - 27436 2585 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Term 27492 - 27539 13.6 27 15 Op 1 . - CDS 27561 - 28937 1736 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 28961 - 29020 3.0 28 15 Op 2 . - CDS 29099 - 29755 273 ## BAD_1012 hypothetical protein - Prom 29900 - 29959 1.5 29 16 Tu 1 . + CDS 29962 - 31056 720 ## COG0142 Geranylgeranyl pyrophosphate synthase + Term 31057 - 31083 -0.6 + Prom 31086 - 31145 3.6 30 17 Tu 1 . + CDS 31198 - 33408 1803 ## COG0515 Serine/threonine protein kinase + Term 33454 - 33505 11.6 - Term 33442 - 33493 7.8 31 18 Tu 1 . - CDS 33505 - 34209 798 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 34251 - 34310 3.1 32 19 Tu 1 . + CDS 34231 - 34833 394 ## BAD_1016 hypothetical protein + Term 34839 - 34896 1.2 - Term 34898 - 34947 2.4 33 20 Tu 1 . - CDS 34983 - 36035 965 ## COG0547 Anthranilate phosphoribosyltransferase - Prom 36082 - 36141 4.3 - Term 36213 - 36259 13.4 34 21 Op 1 7/0.000 - CDS 36295 - 39171 4048 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Term 39302 - 39343 8.0 35 21 Op 2 . - CDS 39384 - 40043 1021 ## PROTEIN SUPPORTED gi|23465978|ref|NP_696581.1| hypothetical protein BL1418 36 21 Op 3 . - CDS 40060 - 40212 60 ## - Term 40617 - 40645 -0.0 37 22 Tu 1 . - CDS 40657 - 40887 262 ## BAD_1023 RecX-like protein - Term 41255 - 41308 11.3 38 23 Op 1 . - CDS 41341 - 42525 1434 ## COG0468 RecA/RadA recombinase - Prom 42716 - 42775 2.5 39 23 Op 2 . - CDS 42781 - 43044 260 ## BDP_1422 hypothetical protein - Term 43047 - 43086 10.5 40 24 Op 1 2/0.064 - CDS 43102 - 43614 603 ## COG1396 Predicted transcriptional regulators 41 24 Op 2 6/0.000 - CDS 43675 - 44241 210 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 42 24 Op 3 . - CDS 44249 - 44929 228 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 43 24 Op 4 . - CDS 44997 - 47804 2674 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 44 25 Tu 1 . + CDS 47891 - 48100 194 ## + Term 48290 - 48318 -0.6 45 26 Op 1 . - CDS 47993 - 49039 1277 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 46 26 Op 2 . - CDS 49023 - 50477 504 ## PROTEIN SUPPORTED gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase - Prom 50615 - 50674 2.0 47 27 Tu 1 . + CDS 50529 - 51350 668 ## COG2357 Uncharacterized protein conserved in bacteria 48 28 Tu 1 . - CDS 51337 - 52308 858 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 52422 - 52481 1.5 - Term 52480 - 52509 1.2 49 29 Tu 1 . - CDS 52550 - 53383 1092 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 53437 - 53496 2.9 50 30 Tu 1 . - CDS 53539 - 54381 1158 ## BBPR_1282 hypothetical protein 51 31 Op 1 . + CDS 54556 - 55896 979 ## BAD_1037 atypical histidine kinase sensor of two-component system 52 31 Op 2 . + CDS 55884 - 56585 559 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 53 31 Op 3 . + CDS 56636 - 58747 1553 ## COG1479 Uncharacterized conserved protein 54 32 Op 1 19/0.000 - CDS 58792 - 59451 650 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 55 32 Op 2 . - CDS 59451 - 60812 713 ## COG4585 Signal transduction histidine kinase - Prom 60977 - 61036 2.5 + Prom 60853 - 60912 1.8 56 33 Op 1 . + CDS 61034 - 62032 360 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 57 33 Op 2 . + CDS 62062 - 63321 1123 ## BAD_1043 hypothetical protein 58 33 Op 3 . + CDS 63308 - 64594 994 ## BAD_1044 hypothetical protein 59 34 Tu 1 . - CDS 64647 - 65717 742 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 65746 - 65805 4.3 60 35 Op 1 . + CDS 65853 - 66500 738 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 61 35 Op 2 . + CDS 66528 - 67907 1206 ## COG0534 Na+-driven multidrug efflux pump + Term 67922 - 67978 15.0 - Term 67914 - 67962 10.7 62 36 Op 1 . - CDS 67996 - 70698 3365 ## COG1048 Aconitase A 63 36 Op 2 . - CDS 70768 - 73236 2159 ## COG0474 Cation transport ATPase 64 37 Op 1 . - CDS 73391 - 73939 543 ## BAD_1054 hypothetical protein 65 37 Op 2 . - CDS 73975 - 75240 1058 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 66 37 Op 3 . - CDS 75240 - 75986 603 ## BDP_1485 Mn2+/Zn2+ ABC transport system permease 67 37 Op 4 . - CDS 76013 - 76843 1175 ## BDP_1486 hypothetical protein - Prom 76873 - 76932 2.9 68 38 Tu 1 . - CDS 76961 - 77821 750 ## COG0708 Exonuclease III - Term 77837 - 77879 8.2 69 39 Op 1 13/0.000 - CDS 77902 - 79911 751 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 70 39 Op 2 49/0.000 - CDS 79932 - 80897 1188 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 71 39 Op 3 21/0.000 - CDS 80915 - 81841 1171 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 81901 - 81960 4.0 - Term 82062 - 82102 9.7 72 40 Op 1 6/0.000 - CDS 82141 - 83793 2640 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Term 83832 - 83875 0.3 73 40 Op 2 . - CDS 84020 - 85648 2012 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Term 85747 - 85790 1.1 74 41 Tu 1 . - CDS 85805 - 86731 753 ## COG0582 Integrase - Prom 86900 - 86959 2.8 75 42 Tu 1 . + CDS 86910 - 87167 223 ## BDP_1497 hypothetical protein + Term 87323 - 87352 -0.2 - Term 87078 - 87112 3.1 76 43 Op 1 . - CDS 87172 - 88212 741 ## COG0287 Prephenate dehydrogenase 77 43 Op 2 . - CDS 88206 - 89186 755 ## COG0077 Prephenate dehydratase 78 43 Op 3 . - CDS 89254 - 89817 531 ## BAD_1068 hypothetical protein - Prom 89860 - 89919 2.7 - Term 89971 - 90010 -0.6 79 44 Tu 1 . - CDS 90024 - 91955 2826 ## COG1217 Predicted membrane GTPase involved in stress response - Term 92095 - 92139 13.2 80 45 Op 1 1/0.128 - CDS 92173 - 93531 1510 ## COG0477 Permeases of the major facilitator superfamily - Term 93576 - 93612 -0.7 81 45 Op 2 . - CDS 93622 - 94419 439 ## COG1051 ADP-ribose pyrophosphatase - Prom 94488 - 94547 1.8 - Term 94548 - 94576 -0.3 82 46 Op 1 1/0.128 - CDS 94586 - 95425 1042 ## COG1192 ATPases involved in chromosome partitioning 83 46 Op 2 . - CDS 95513 - 96466 515 ## COG4974 Site-specific recombinase XerD - Term 96549 - 96585 3.7 84 47 Op 1 . - CDS 96619 - 97002 630 ## PROTEIN SUPPORTED gi|119026092|ref|YP_909937.1| 50S ribosomal protein L20 85 47 Op 2 . - CDS 97053 - 97247 313 ## PROTEIN SUPPORTED gi|224282678|ref|ZP_03646000.1| 50S ribosomal protein L35 86 47 Op 3 . - CDS 97266 - 97964 941 ## COG0290 Translation initiation factor 3 (IF-3) 87 48 Tu 1 . + CDS 98279 - 99034 472 ## COG1564 Thiamine pyrophosphokinase + Prom 99059 - 99118 2.0 88 49 Tu 1 . + CDS 99182 - 100237 1538 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 100285 - 100323 7.1 89 50 Tu 1 . + CDS 100368 - 100874 440 ## COG2606 Uncharacterized conserved protein + Term 100930 - 100966 -0.8 - Term 100637 - 100676 -0.4 90 51 Tu 1 . - CDS 100900 - 101913 374 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - Prom 101944 - 102003 1.8 + Prom 101962 - 102021 2.3 91 52 Op 1 . + CDS 102076 - 103026 1046 ## COG2017 Galactose mutarotase and related enzymes + Prom 103110 - 103169 2.7 92 52 Op 2 . + CDS 103201 - 103275 159 ## + Term 103312 - 103355 9.3 - Term 103302 - 103341 9.8 93 53 Op 1 . - CDS 103408 - 103653 320 ## BAD_1083 hypothetical protein 94 53 Op 2 . - CDS 103650 - 104297 617 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog + Prom 104260 - 104319 3.3 95 54 Op 1 . + CDS 104351 - 104638 213 ## BAD_1085 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (EC:6.3.2.13) 96 54 Op 2 . + CDS 104656 - 105903 873 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 97 54 Op 3 . + CDS 105965 - 106963 1002 ## Balac_1169 hypothetical protein + Term 107001 - 107055 13.2 - Term 107046 - 107102 1.1 98 55 Tu 1 . - CDS 107119 - 108738 1801 ## COG0285 Folylpolyglutamate synthase 99 56 Op 1 . + CDS 108885 - 110486 1697 ## COG0006 Xaa-Pro aminopeptidase 100 56 Op 2 . + CDS 110488 - 111009 545 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 111038 - 111086 15.4 - Term 111019 - 111081 17.2 101 57 Op 1 13/0.000 - CDS 111112 - 112821 765 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 102 57 Op 2 49/0.000 - CDS 112826 - 113998 1283 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 103 57 Op 3 38/0.000 - CDS 114000 - 115091 269 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Prom 115127 - 115186 1.9 - Term 115128 - 115173 1.0 104 57 Op 4 . - CDS 115261 - 116892 2535 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Prom 117123 - 117182 9.1 105 58 Op 1 . + CDS 117223 - 118425 360 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 106 58 Op 2 . + CDS 118453 - 119352 1385 ## COG0524 Sugar kinases, ribokinase family 107 58 Op 3 . + CDS 119388 - 119828 109 ## + Term 119951 - 119994 4.5 + Prom 120312 - 120371 3.9 108 59 Tu 1 . + CDS 120426 - 121682 1616 ## COG2942 N-acyl-D-glucosamine 2-epimerase + Term 121745 - 121784 4.0 109 60 Op 1 . - CDS 121837 - 122931 191 ## PROTEIN SUPPORTED gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 110 60 Op 2 26/0.000 - CDS 122931 - 124496 1503 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Term 124588 - 124622 2.4 111 60 Op 3 31/0.000 - CDS 124629 - 125804 1098 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase - Prom 125857 - 125916 1.9 112 60 Op 4 25/0.000 - CDS 125935 - 127170 1068 ## COG0772 Bacterial cell division membrane protein 113 60 Op 5 28/0.000 - CDS 127157 - 128590 1305 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 114 60 Op 6 28/0.000 - CDS 128692 - 129789 1163 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 115 60 Op 7 . - CDS 129863 - 131353 1234 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 116 60 Op 8 . - CDS 131444 - 132322 861 ## BAD_1106 hypothetical protein 117 60 Op 9 . - CDS 132356 - 134101 1477 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 118 60 Op 10 . - CDS 134155 - 134610 451 ## BAD_1108 hypothetical protein 119 60 Op 11 29/0.000 - CDS 134613 - 135644 460 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 120 60 Op 12 . - CDS 135644 - 136159 489 ## COG2001 Uncharacterized protein conserved in bacteria + Prom 136337 - 136396 2.3 121 61 Op 1 . + CDS 136424 - 138703 1920 ## COG3973 Superfamily I DNA and RNA helicases 122 61 Op 2 . + CDS 138714 - 139913 1323 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Term 140050 - 140085 3.1 123 62 Op 1 . - CDS 140099 - 140575 375 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 124 62 Op 2 . - CDS 140601 - 140918 298 ## BAD_1114 hypothetical protein - Prom 140958 - 141017 2.6 + Prom 140989 - 141048 3.5 125 63 Tu 1 . + CDS 141068 - 141784 791 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 141812 - 141874 9.4 - Term 141800 - 141862 17.0 126 64 Tu 1 . - CDS 141901 - 142773 573 ## COG1230 Co/Zn/Cd efflux system component - Term 142992 - 143035 6.1 127 65 Tu 1 . - CDS 143151 - 144113 1214 ## COG0039 Malate/lactate dehydrogenases - Prom 144174 - 144233 4.7 - Term 144129 - 144157 -0.2 128 66 Op 1 . - CDS 144314 - 145774 607 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 129 66 Op 2 . - CDS 145852 - 146001 61 ## + Prom 145774 - 145833 3.1 130 67 Op 1 . + CDS 145936 - 146547 584 ## COG2813 16S RNA G1207 methylase RsmC 131 67 Op 2 . + CDS 146544 - 150644 3434 ## COG1643 HrpA-like helicases 132 68 Op 1 . - CDS 150754 - 151830 733 ## BBPR_0695 hypothetical protein 133 68 Op 2 . - CDS 151837 - 152925 711 ## BBIF_0724 hypothetical protein 134 68 Op 3 . - CDS 153009 - 153719 510 ## BBIF_0288 hypothetical protein - Prom 153742 - 153801 3.0 + Prom 153667 - 153726 1.6 135 69 Tu 1 . + CDS 153913 - 154563 205 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 136 70 Tu 1 . - CDS 154654 - 155880 1487 ## COG2814 Arabinose efflux permease + Prom 155833 - 155892 1.6 137 71 Op 1 . + CDS 156016 - 156945 935 ## BDP_1563 hypothetical protein 138 71 Op 2 . + CDS 156995 - 158467 698 ## gi|225351446|ref|ZP_03742469.1| hypothetical protein BIFPSEUDO_03041 + Term 158524 - 158578 16.2 - Term 158506 - 158573 18.0 139 72 Op 1 . - CDS 158591 - 159952 1664 ## COG0174 Glutamine synthetase 140 72 Op 2 25/0.000 - CDS 160039 - 160764 939 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 141 72 Op 3 . - CDS 160891 - 161538 832 ## COG0118 Glutamine amidotransferase 142 72 Op 4 . - CDS 161635 - 162417 756 ## BAD_1126 hypothetical protein 143 72 Op 5 13/0.000 - CDS 162417 - 163016 746 ## COG0131 Imidazoleglycerol-phosphate dehydratase 144 72 Op 6 19/0.000 - CDS 163076 - 164251 1578 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 145 72 Op 7 . - CDS 164248 - 165630 1780 ## COG0141 Histidinol dehydrogenase - Prom 165650 - 165709 2.0 146 73 Op 1 2/0.064 - CDS 165755 - 169345 3792 ## COG0587 DNA polymerase III, alpha subunit 147 73 Op 2 15/0.000 - CDS 169380 - 170318 946 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 148 73 Op 3 . - CDS 170315 - 170863 582 ## COG0597 Lipoprotein signal peptidase 149 73 Op 4 . - CDS 170885 - 172648 2506 ## BAD_1133 hypothetical protein 150 73 Op 5 . - CDS 172652 - 172933 231 ## BDP_1590 hemolysin-like protein - Term 172945 - 172997 11.1 151 74 Op 1 . - CDS 173027 - 173506 619 ## COG1799 Uncharacterized protein conserved in bacteria 152 74 Op 2 . - CDS 173537 - 174781 1342 ## COG0206 Cell division GTPase 153 75 Tu 1 . + CDS 174665 - 175027 88 ## 154 76 Op 1 . - CDS 174959 - 176188 466 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 155 76 Op 2 . - CDS 176218 - 177693 1853 ## COG0423 Glycyl-tRNA synthetase (class II) 156 76 Op 3 . - CDS 177775 - 178386 783 ## gi|225351463|ref|ZP_03742486.1| hypothetical protein BIFPSEUDO_03058 157 76 Op 4 . - CDS 178399 - 179343 773 ## gi|225351464|ref|ZP_03742487.1| hypothetical protein BIFPSEUDO_03059 158 76 Op 5 . - CDS 179375 - 180421 1026 ## COG4972 Tfp pilus assembly protein, ATPase PilM 159 76 Op 6 . - CDS 180468 - 181292 706 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 160 76 Op 7 . - CDS 181317 - 183692 2332 ## gi|225351467|ref|ZP_03742490.1| hypothetical protein BIFPSEUDO_03062 161 76 Op 8 . - CDS 183714 - 185063 1369 ## COG1459 Type II secretory pathway, component PulF 162 76 Op 9 . - CDS 185112 - 185558 482 ## gi|225351469|ref|ZP_03742492.1| hypothetical protein BIFPSEUDO_03064 - Prom 185787 - 185846 4.6 - Term 186008 - 186049 10.2 163 77 Op 1 . - CDS 186073 - 186735 595 ## gi|225351471|ref|ZP_03742494.1| hypothetical protein BIFPSEUDO_03066 164 77 Op 2 . - CDS 186748 - 187533 700 ## gi|225351472|ref|ZP_03742495.1| hypothetical protein BIFPSEUDO_03067 - Prom 187614 - 187673 3.0 165 78 Op 1 . + CDS 187397 - 187774 98 ## + Term 187785 - 187824 1.5 166 78 Op 2 2/0.064 + CDS 187870 - 189627 1755 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 167 78 Op 3 . + CDS 189674 - 191614 1876 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 168 78 Op 4 . + CDS 191650 - 193464 886 ## BAD_0060 hypothetical protein 169 79 Op 1 6/0.000 + CDS 193654 - 194523 1025 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family + Term 194564 - 194622 2.2 + Prom 194568 - 194627 1.8 170 79 Op 2 11/0.000 + CDS 194653 - 195405 751 ## COG0352 Thiamine monophosphate synthase 171 79 Op 3 . + CDS 195474 - 196316 938 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 172 79 Op 4 . + CDS 196384 - 196749 553 ## COG0011 Uncharacterized conserved protein + Term 196785 - 196833 13.2 173 80 Op 1 . + CDS 196850 - 196939 73 ## 174 80 Op 2 4/0.043 + CDS 196936 - 197892 726 ## COG1609 Transcriptional regulators + Term 197919 - 197969 6.1 + Prom 198006 - 198065 4.5 175 81 Op 1 . + CDS 198180 - 199505 1969 ## COG0477 Permeases of the major facilitator superfamily 176 81 Op 2 . + CDS 199652 - 201208 2001 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 201241 - 201296 15.2 - Term 201229 - 201284 11.4 177 82 Tu 1 . - CDS 201454 - 201549 76 ## + Prom 201271 - 201330 3.1 178 83 Op 1 21/0.000 + CDS 201506 - 202357 749 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 202541 - 202582 4.1 + Prom 202401 - 202460 5.3 179 83 Op 2 . + CDS 202644 - 203744 1414 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Prom 203763 - 203822 3.3 180 84 Tu 1 . + CDS 203934 - 205211 947 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Term 205208 - 205245 9.1 181 85 Op 1 4/0.043 - CDS 205273 - 206064 942 ## COG0020 Undecaprenyl pyrophosphate synthase 182 85 Op 2 . - CDS 206070 - 206798 618 ## COG1381 Recombinational DNA repair protein (RecF pathway) 183 85 Op 3 . - CDS 206889 - 208601 1602 ## BAD_1156 hypothetical protein - Term 208630 - 208687 18.1 184 86 Op 1 . - CDS 208695 - 209891 1328 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis - Term 209900 - 209937 7.0 185 86 Op 2 . - CDS 209979 - 211157 1241 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase - Term 211199 - 211234 7.4 186 86 Op 3 . - CDS 211249 - 212814 1348 ## BAD_1159 hypothetical protein - Prom 213038 - 213097 79.1 187 87 Tu 1 . + CDS 212781 - 213029 95 ## + Term 213043 - 213109 30.0 + TRNA 213021 - 213097 90.3 # Val TAC 0 0 - Term 213227 - 213264 7.1 188 88 Op 1 . - CDS 213321 - 213737 416 ## BAD_1160 hypothetical protein 189 88 Op 2 . - CDS 213833 - 214717 831 ## COG3480 Predicted secreted protein containing a PDZ domain - Prom 214811 - 214870 1.5 + Prom 214509 - 214568 1.6 190 89 Tu 1 . + CDS 214793 - 216370 1604 ## COG5282 Uncharacterized conserved protein + Term 216405 - 216436 1.6 191 90 Tu 1 . - CDS 216393 - 217892 1051 ## COG0210 Superfamily I DNA and RNA helicases - Prom 218021 - 218080 3.0 192 91 Op 1 . + CDS 218007 - 219566 1354 ## BAD_1164 hypothetical protein 193 91 Op 2 . + CDS 219627 - 219851 352 ## BDP_1626 ATP-binding protein + Term 219910 - 219951 11.3 - Term 219903 - 219934 4.1 194 92 Tu 1 . - CDS 219980 - 220906 545 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 221041 - 221100 4.6 + Prom 220907 - 220966 2.0 195 93 Tu 1 . + CDS 220999 - 221664 716 ## COG4243 Predicted membrane protein + Term 221710 - 221751 5.7 - Term 221700 - 221737 7.8 196 94 Tu 1 . - CDS 221781 - 222680 1079 ## COG0253 Diaminopimelate epimerase 197 95 Op 1 . + CDS 222779 - 223555 720 ## COG0796 Glutamate racemase 198 95 Op 2 . + CDS 223638 - 223802 247 ## BDP_1631 phospholipase - Term 223646 - 223691 1.4 199 96 Tu 1 . - CDS 223760 - 223855 80 ## - Prom 223876 - 223935 2.5 + Prom 223835 - 223894 5.0 200 97 Tu 1 . + CDS 223947 - 225596 2234 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 225649 - 225701 14.1 - Term 225634 - 225690 20.1 201 98 Tu 1 . - CDS 225727 - 226665 847 ## COG1446 Asparaginase - Prom 226700 - 226759 3.5 + Prom 226659 - 226718 2.1 202 99 Op 1 . + CDS 226822 - 227670 995 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 203 99 Op 2 . + CDS 227684 - 228700 880 ## COG0583 Transcriptional regulator + Term 228734 - 228784 5.8 + Prom 228772 - 228831 3.9 204 100 Tu 1 . + CDS 228919 - 230127 1239 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 205 101 Tu 1 . - CDS 230096 - 230344 181 ## - Prom 230371 - 230430 3.4 + Prom 230166 - 230225 2.0 206 102 Tu 1 . + CDS 230264 - 230932 491 ## BDP_1634 phospholipase/carboxylesterase + Term 231159 - 231204 2.4 207 103 Tu 1 . - CDS 231484 - 231675 103 ## BLJ_1290 putative transcriptional regulator - Term 231681 - 231705 -1.0 208 104 Tu 1 . - CDS 231784 - 231924 57 ## - Prom 231967 - 232026 2.1 209 105 Tu 1 . + CDS 231935 - 232282 70 ## 210 106 Tu 1 . - CDS 232311 - 232565 216 ## gi|225351513|ref|ZP_03742536.1| hypothetical protein BIFPSEUDO_03109 + Prom 232524 - 232583 2.3 211 107 Op 1 . + CDS 232611 - 232769 61 ## 212 107 Op 2 . + CDS 232814 - 233023 216 ## 213 107 Op 3 . + CDS 233020 - 233331 182 ## gi|225351514|ref|ZP_03742537.1| hypothetical protein BIFPSEUDO_03110 214 107 Op 4 . + CDS 233350 - 233463 56 ## + Term 233476 - 233509 4.5 215 108 Tu 1 . - CDS 233460 - 233777 172 ## + Prom 233611 - 233670 1.6 216 109 Op 1 . + CDS 233797 - 234168 132 ## gi|225351515|ref|ZP_03742538.1| hypothetical protein BIFPSEUDO_03111 217 109 Op 2 . + CDS 234255 - 234470 114 ## 218 110 Op 1 13/0.000 - CDS 234422 - 234712 229 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 219 110 Op 2 12/0.000 - CDS 234780 - 235811 373 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 220 110 Op 3 2/0.064 - CDS 235811 - 236488 138 ## COG1468 RecB family exonuclease 221 110 Op 4 . - CDS 236522 - 237367 829 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair 222 110 Op 5 . - CDS 237427 - 239304 443 ## BDP_1641 CRISPR-associated RAMP Csd1 family protein 223 110 Op 6 . - CDS 239308 - 239781 261 ## BAD_1185 CRISPR-associated Cas5d family protein - Term 240201 - 240246 8.0 224 111 Op 1 . - CDS 240258 - 241901 1318 ## COG1203 Predicted helicases - Prom 241956 - 242015 3.0 225 111 Op 2 . - CDS 242031 - 242675 353 ## COG1203 Predicted helicases - Prom 242830 - 242889 2.6 - Term 243122 - 243154 -0.8 226 112 Tu 1 . - CDS 243248 - 246562 4338 ## COG0060 Isoleucyl-tRNA synthetase - Term 246874 - 246916 10.3 227 113 Tu 1 . - CDS 246964 - 248412 2105 ## COG2211 Na+/melibiose symporter and related transporters - Prom 248457 - 248516 3.6 - Term 248665 - 248702 -1.0 228 114 Tu 1 . - CDS 248731 - 249741 935 ## COG1609 Transcriptional regulators - Prom 249773 - 249832 4.1 + Prom 249742 - 249801 2.7 229 115 Tu 1 . + CDS 249860 - 250066 152 ## gi|225351527|ref|ZP_03742550.1| hypothetical protein BIFPSEUDO_03123 - Term 249936 - 249994 18.1 230 116 Op 1 35/0.000 - CDS 250118 - 251578 1880 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 231 116 Op 2 35/0.000 - CDS 251421 - 252167 456 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 232 116 Op 3 4/0.043 - CDS 252181 - 253992 197 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 233 116 Op 4 . - CDS 254031 - 254744 463 ## COG1846 Transcriptional regulators - Term 254852 - 254914 7.1 234 117 Tu 1 . - CDS 254939 - 257185 2898 ## COG1472 Beta-glucosidase-related glycosidases - Prom 257320 - 257379 1.8 + Prom 257293 - 257352 3.5 235 118 Op 1 . + CDS 257439 - 258017 640 ## BAD_1195 TetR-type transcriptional regulator 236 118 Op 2 . + CDS 258073 - 259275 812 ## COG1929 Glycerate kinase 237 119 Op 1 . - CDS 259250 - 259528 228 ## BDP_1665 multidrug resistance protein B 238 119 Op 2 . - CDS 259601 - 261943 2887 ## COG1472 Beta-glucosidase-related glycosidases - Prom 261992 - 262051 4.2 - Term 262023 - 262082 10.2 239 120 Tu 1 . - CDS 262172 - 262435 150 ## BAD_1198 TetR-type transcriptional regulator - Prom 262546 - 262605 3.3 + Prom 262355 - 262414 2.5 240 121 Op 1 . + CDS 262537 - 263775 696 ## BAD_1199 hypothetical protein 241 121 Op 2 . + CDS 263815 - 265002 511 ## BAD_1200 hypothetical protein + Term 265073 - 265112 -0.9 + Prom 265026 - 265085 6.8 242 122 Tu 1 . + CDS 265137 - 265442 58 ## - Term 265265 - 265301 2.0 243 123 Op 1 . - CDS 265327 - 265962 622 ## BAD_1201 TetR-type transcriptional regulator 244 123 Op 2 . - CDS 266010 - 267209 746 ## COG2730 Endoglucanase - Term 267268 - 267304 2.4 245 124 Op 1 . - CDS 267432 - 269078 1884 ## COG3507 Beta-xylosidase 246 124 Op 2 . - CDS 269141 - 270349 1492 ## COG2730 Endoglucanase - Prom 270402 - 270461 3.1 - Term 270556 - 270594 7.1 247 125 Op 1 . - CDS 270623 - 272179 1479 ## COG3534 Alpha-L-arabinofuranosidase - Prom 272237 - 272296 1.7 248 125 Op 2 . - CDS 272335 - 273591 1695 ## COG0477 Permeases of the major facilitator superfamily - Prom 273716 - 273775 8.6 + Prom 273660 - 273719 4.6 249 126 Tu 1 . + CDS 273853 - 274539 596 ## BAD_1207 TetR-type transcriptional regulator - Term 274581 - 274638 14.1 250 127 Tu 1 . - CDS 274771 - 276114 1516 ## COG5520 O-Glycosyl hydrolase - Prom 276205 - 276264 6.8 - Term 276408 - 276476 7.1 251 128 Tu 1 . - CDS 276484 - 277809 1908 ## COG0477 Permeases of the major facilitator superfamily - Prom 278055 - 278114 4.8 + Prom 278019 - 278078 4.1 252 129 Tu 1 . + CDS 278167 - 278793 741 ## BAD_1210 TetR-type transcriptional regulator 253 130 Tu 1 . - CDS 278827 - 280953 2482 ## COG1874 Beta-galactosidase - Prom 281086 - 281145 5.5 - Term 281326 - 281368 0.3 254 131 Tu 1 . - CDS 281416 - 282045 660 ## BAD_1212 TetR-type transcriptional regulator - Term 282114 - 282152 6.0 255 132 Tu 1 . - CDS 282203 - 283474 1431 ## COG3572 Gamma-glutamylcysteine synthetase - Prom 283693 - 283752 3.6 - Term 283674 - 283717 9.2 256 133 Op 1 . - CDS 283799 - 287683 4442 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 257 133 Op 2 . - CDS 287664 - 288521 931 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 288645 - 288704 2.3 - Term 288669 - 288710 -0.1 258 134 Tu 1 12/0.000 - CDS 288770 - 289483 579 ## COG0602 Organic radical activating enzymes - Term 289544 - 289585 11.3 259 135 Op 1 . - CDS 289618 - 292017 3133 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 260 135 Op 2 . - CDS 292018 - 292221 65 ## - Prom 292258 - 292317 2.0 261 136 Op 1 . + CDS 292342 - 293622 1265 ## COG1570 Exonuclease VII, large subunit 262 136 Op 2 . + CDS 293625 - 293909 534 ## BDP_1698 exodeoxyribonuclease VII small subunit XseB (EC:3.1.11.6) + Term 293936 - 294000 17.2 + TRNA 294051 - 294123 77.2 # Arg CCT 0 0 - Term 294034 - 294101 18.5 263 137 Tu 1 . - CDS 294175 - 295260 789 ## BAD_1219 hypothetical protein - Prom 295286 - 295345 1.6 - 5S_RRNA 295478 - 295568 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 295606 - 295665 2.4 264 138 Tu 1 . + CDS 295729 - 296454 533 ## BAD_1222 hypothetical protein - Term 296418 - 296446 -0.9 265 139 Tu 1 . - CDS 296489 - 297460 953 ## COG0248 Exopolyphosphatase - Prom 297560 - 297619 5.1 - Term 297607 - 297656 1.1 266 140 Tu 1 . - CDS 297697 - 298902 1307 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 299000 - 299059 3.4 - Term 298993 - 299028 0.1 267 141 Tu 1 . - CDS 299070 - 299462 383 ## COG3727 DNA G:T-mismatch repair endonuclease - Prom 299678 - 299737 2.4 + Prom 299521 - 299580 2.3 268 142 Tu 1 . + CDS 299737 - 300741 1149 ## COG0673 Predicted dehydrogenases and related proteins + Term 300754 - 300816 3.3 + Prom 300773 - 300832 4.2 269 143 Tu 1 1/0.128 + CDS 300856 - 302916 1598 ## COG0210 Superfamily I DNA and RNA helicases + Prom 302951 - 303010 4.1 270 144 Op 1 3/0.064 + CDS 303081 - 303236 216 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 271 144 Op 2 . + CDS 303307 - 303519 184 ## COG1061 DNA or RNA helicases of superfamily II + Term 303613 - 303651 1.2 272 145 Op 1 7/0.000 - CDS 303606 - 304724 1118 ## COG0675 Transposase and inactivated derivatives 273 145 Op 2 . - CDS 304735 - 305133 487 ## COG1943 Transposase and inactivated derivatives - Prom 305165 - 305224 5.8 + Prom 305129 - 305188 2.3 274 146 Op 1 1/0.128 + CDS 305238 - 305831 347 ## COG1061 DNA or RNA helicases of superfamily II 275 146 Op 2 . + CDS 305744 - 307204 856 ## COG1061 DNA or RNA helicases of superfamily II + Prom 307318 - 307377 3.2 276 147 Op 1 . + CDS 307405 - 307542 83 ## + Prom 307622 - 307681 2.5 277 147 Op 2 . + CDS 307704 - 308126 826 ## BDP_1719 hypothetical protein + Term 308212 - 308266 6.7 - Term 308196 - 308258 17.0 278 148 Tu 1 . - CDS 308290 - 308721 589 ## BDP_1664 argininosuccinate synthase - Prom 308871 - 308930 3.6 + Prom 308803 - 308862 3.0 279 149 Tu 1 . + CDS 309056 - 310363 1391 ## BDP_1720 hypothetical protein - 5S_RRNA 310519 - 310630 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 310991 - 312331 95.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 312447 - 313754 94.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - SSU_RRNA 314382 - 315893 99.0 # D86187 [D:1..1513] # 16S ribosomal RNA # Bifidobacterium pseudocatenulatum DSM 20438 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 316326 - 316385 2.3 280 150 Tu 1 . + CDS 316510 - 316971 279 ## BAD_1239 putative transcriptional regulator + Term 317122 - 317161 2.6 281 151 Tu 1 . - CDS 317150 - 320146 3505 ## COG0474 Cation transport ATPase - Prom 320317 - 320376 3.5 + Prom 320308 - 320367 4.6 282 152 Tu 1 . + CDS 320553 - 323684 3295 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 323718 - 323765 14.1 + Prom 323863 - 323922 1.7 283 153 Tu 1 . + CDS 324009 - 324917 1081 ## COG3247 Uncharacterized conserved protein + Term 324965 - 325002 4.7 + Prom 325018 - 325077 3.2 284 154 Op 1 . + CDS 325105 - 325422 321 ## gi|225351591|ref|ZP_03742614.1| hypothetical protein BIFPSEUDO_03188 285 154 Op 2 . + CDS 325419 - 325748 196 ## EUBELI_20442 hypothetical protein + Prom 325752 - 325811 2.7 286 154 Op 3 . + CDS 325981 - 326103 232 ## gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 + Term 326182 - 326234 22.0 - Term 326170 - 326221 18.0 287 155 Tu 1 . - CDS 326238 - 327512 1470 ## COG0477 Permeases of the major facilitator superfamily 288 156 Tu 1 . + CDS 327628 - 328629 481 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 328708 - 328753 12.1 - Term 329005 - 329029 -1.0 289 157 Tu 1 . - CDS 329038 - 330447 1923 ## BDP_2237 hypothetical protein - Prom 330548 - 330607 2.9 - Term 330616 - 330657 10.2 290 158 Tu 1 . - CDS 330811 - 331938 1489 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 332096 - 332155 3.3 + Prom 331991 - 332050 2.8 291 159 Op 1 9/0.000 + CDS 332258 - 332974 721 ## COG3279 Response regulator of the LytR/AlgR family 292 159 Op 2 . + CDS 332971 - 334422 1245 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Term 334392 - 334437 11.1 293 160 Op 1 . - CDS 334452 - 335483 964 ## BL1511 hypothetical protein 294 160 Op 2 . - CDS 335612 - 336970 1518 ## COG0038 Chloride channel protein EriC 295 160 Op 3 . - CDS 337048 - 337374 252 ## BLLJ_1773 hypothetical protein 296 160 Op 4 . - CDS 337446 - 337895 279 ## BLIF_1953 hypothetical protein 297 160 Op 5 . - CDS 337907 - 338695 444 ## BBPR_1819 hypothetical protein 298 160 Op 6 . - CDS 338679 - 339662 694 ## COG3764 Sortase (surface protein transpeptidase) - Term 339674 - 339733 9.8 299 161 Op 1 . - CDS 339743 - 341347 1716 ## BLLJ_1900 cell surface protein 300 161 Op 2 . - CDS 341412 - 349118 7087 ## BBIF_1762 cell surface protein with LPXTG anchor 301 162 Tu 1 . - CDS 349444 - 349653 121 ## gi|291455652|ref|ZP_06595042.1| hypothetical protein BIFBRE_02842 - Prom 349697 - 349756 2.6 302 163 Op 1 . - CDS 350136 - 350690 954 ## BDP_2252 hypothetical protein 303 163 Op 2 . - CDS 350683 - 353112 3329 ## COG1472 Beta-glucosidase-related glycosidases 304 164 Tu 1 . - CDS 353345 - 354046 341 ## BDP_2256 PAP2 family protein - Prom 354241 - 354300 4.0 + Prom 354053 - 354112 1.9 305 165 Tu 1 . + CDS 354251 - 354691 410 ## COG0456 Acetyltransferases + Term 354931 - 354963 1.2 306 166 Op 1 36/0.000 - CDS 354934 - 355569 199 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 307 166 Op 2 10/0.000 - CDS 355582 - 356805 797 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 308 166 Op 3 . - CDS 356802 - 358169 877 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 358309 - 358368 2.6 - Term 358367 - 358426 9.2 309 167 Tu 1 . - CDS 358465 - 358653 209 ## Blon_2331 sugar (glycoside-pentoside-hexuronide) transporter - Prom 358713 - 358772 3.8 + Prom 358845 - 358904 4.3 310 168 Tu 1 . + CDS 358962 - 362033 3370 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 362145 - 362193 3.8 - Term 362135 - 362178 2.0 311 169 Tu 1 . - CDS 362215 - 363231 515 ## COG1609 Transcriptional regulators - Prom 363274 - 363333 3.7 - Term 363337 - 363388 17.2 312 170 Op 1 . - CDS 363417 - 365768 854 ## BLJ_0327 hypothetical protein 313 170 Op 2 . - CDS 365795 - 366688 917 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 314 170 Op 3 1/0.128 - CDS 366685 - 367506 382 ## COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold 315 170 Op 4 3/0.064 - CDS 367517 - 368308 823 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 316 170 Op 5 1/0.128 - CDS 368324 - 369601 1481 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Term 369629 - 369669 13.0 317 171 Op 1 14/0.000 - CDS 369693 - 371099 1384 ## COG1653 ABC-type sugar transport system, periplasmic component 318 171 Op 2 38/0.000 - CDS 371193 - 372170 1213 ## COG0395 ABC-type sugar transport system, permease component 319 171 Op 3 . - CDS 372170 - 373081 960 ## COG1175 ABC-type sugar transport systems, permease components - Prom 373157 - 373216 3.9 320 172 Op 1 . + CDS 373112 - 373396 60 ## 321 172 Op 2 . + CDS 373438 - 374481 685 ## COG1609 Transcriptional regulators 322 172 Op 3 . + CDS 374527 - 374844 280 ## BAD_1603 beta-galactosidase + Term 374859 - 374905 11.1 + Prom 375027 - 375086 3.1 323 173 Op 1 6/0.000 + CDS 375209 - 376552 1165 ## COG1653 ABC-type sugar transport system, periplasmic component 324 173 Op 2 . + CDS 376562 - 377299 199 ## COG1609 Transcriptional regulators 325 174 Op 1 . + CDS 377410 - 377577 91 ## gi|212716993|ref|ZP_03325121.1| hypothetical protein BIFCAT_01939 326 174 Op 2 1/0.128 + CDS 377609 - 379417 1908 ## COG0366 Glycosidases + Prom 379432 - 379491 1.8 327 175 Op 1 38/0.000 + CDS 379545 - 380477 1149 ## COG1175 ABC-type sugar transport systems, permease components 328 175 Op 2 . + CDS 380737 - 381549 1006 ## COG0395 ABC-type sugar transport system, permease component + Prom 381652 - 381711 9.0 329 176 Tu 1 . + CDS 381794 - 383884 2815 ## COG1874 Beta-galactosidase + Prom 383938 - 383997 3.0 330 177 Tu 1 . + CDS 384026 - 385102 1073 ## COG1609 Transcriptional regulators + Term 385217 - 385246 -0.3 - Term 385465 - 385519 5.7 331 178 Tu 1 . - CDS 385580 - 386911 890 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 386931 - 386990 1.6 + Prom 386916 - 386975 1.8 332 179 Op 1 . + CDS 387158 - 388012 1009 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 333 179 Op 2 . + CDS 388053 - 388859 803 ## BDP_1901 hypothetical protein + Term 388900 - 388944 1.3 334 180 Tu 1 . - CDS 388870 - 390156 660 ## COG2199 FOG: GGDEF domain 335 181 Tu 1 . + CDS 390074 - 390241 90 ## + Term 390306 - 390338 -0.8 + Prom 390264 - 390323 3.6 336 182 Tu 1 . + CDS 390352 - 391893 1173 ## COG0477 Permeases of the major facilitator superfamily 337 183 Tu 1 . - CDS 391912 - 392235 448 ## BDP_1898 hypothetical protein - Prom 392284 - 392343 2.9 338 184 Tu 1 . + CDS 392536 - 393552 607 ## BAD_1391 hypothetical protein + Term 393645 - 393682 3.1 339 185 Tu 1 . - CDS 393568 - 393693 118 ## + Prom 393590 - 393649 2.1 340 186 Tu 1 . + CDS 393761 - 395683 1956 ## BAD_1390 hypothetical protein + Prom 395871 - 395930 3.0 341 187 Tu 1 . + CDS 395989 - 397656 1561 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis + Term 397696 - 397731 6.1 + Prom 397910 - 397969 5.9 342 188 Tu 1 . + CDS 398127 - 399461 764 ## BDP_1863 hypothetical protein + Term 399495 - 399560 7.0 + Prom 399701 - 399760 2.5 343 189 Op 1 . + CDS 399845 - 400102 107 ## BDP_0068 abi-like protein 344 189 Op 2 . + CDS 400099 - 400785 175 ## BDP_0068 abi-like protein 345 190 Tu 1 . + CDS 400898 - 401137 110 ## 346 191 Tu 1 . + CDS 401321 - 402241 892 ## Blon_2087 proline symporter - Term 402482 - 402508 -0.6 347 192 Tu 1 . - CDS 402540 - 402866 160 ## gi|225351656|ref|ZP_03742679.1| hypothetical protein BIFPSEUDO_03253 - Term 402934 - 403000 1.2 348 193 Op 1 . - CDS 403005 - 403172 151 ## gi|225351657|ref|ZP_03742680.1| hypothetical protein BIFPSEUDO_03254 349 193 Op 2 . - CDS 403034 - 403660 119 ## COG3594 Fucose 4-O-acetylase and related acetyltransferases - Prom 403698 - 403757 4.5 350 194 Tu 1 . - CDS 403802 - 404530 488 ## BAD_1380 putative O-antigen polymerase - Prom 404738 - 404797 7.2 - Term 404744 - 404795 -0.0 351 195 Op 1 . - CDS 404968 - 405213 159 ## BAD_1381 FhiA protein 352 195 Op 2 . - CDS 405289 - 406308 562 ## BDP_1841 nitroreductase 353 195 Op 3 . - CDS 406333 - 407436 882 ## BAD_1383 hypothetical protein 354 195 Op 4 7/0.000 - CDS 407463 - 408017 100 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 355 195 Op 5 8/0.000 - CDS 408177 - 409214 257 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 356 195 Op 6 . - CDS 409211 - 410557 971 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Prom 410336 - 410395 5.1 357 196 Tu 1 . + CDS 410469 - 410630 100 ## 358 197 Op 1 25/0.000 - CDS 410631 - 411920 929 ## COG0438 Glycosyltransferase 359 197 Op 2 . - CDS 411902 - 413023 509 ## COG0438 Glycosyltransferase 360 197 Op 3 . - CDS 413089 - 413316 94 ## - Prom 413495 - 413554 1.8 + Prom 413401 - 413460 5.2 361 198 Op 1 25/0.000 + CDS 413487 - 414623 1001 ## COG0438 Glycosyltransferase 362 198 Op 2 . + CDS 414626 - 415993 1130 ## COG0438 Glycosyltransferase 363 199 Op 1 . - CDS 415967 - 416191 139 ## 364 199 Op 2 . - CDS 416201 - 416398 79 ## - Prom 416560 - 416619 4.4 + Prom 416944 - 417003 1.7 365 200 Op 1 . + CDS 417049 - 418056 524 ## BLLJ_0369 hypothetical protein 366 200 Op 2 . + CDS 418064 - 419281 702 ## gi|225351671|ref|ZP_03742694.1| hypothetical protein BIFPSEUDO_03268 367 200 Op 3 . + CDS 419286 - 420254 639 ## BDP_1837 hypothetical protein 368 200 Op 4 . + CDS 420266 - 421003 242 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 369 200 Op 5 . + CDS 421020 - 422138 468 ## BBMN68_1008 protein 370 200 Op 6 . + CDS 422154 - 423173 494 ## BDP_1841 nitroreductase 371 200 Op 7 . + CDS 423189 - 424292 366 ## SpiBuddy_0392 hypothetical protein 372 200 Op 8 . + CDS 424298 - 425812 1140 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 425964 - 426000 -0.7 373 201 Tu 1 . + CDS 426088 - 426282 87 ## + Term 426363 - 426397 1.1 374 202 Tu 1 . + CDS 426544 - 427383 534 ## COG4584 Transposase and inactivated derivatives + Term 427504 - 427532 -0.1 375 203 Op 1 23/0.000 - CDS 427358 - 428110 474 ## COG2801 Transposase and inactivated derivatives 376 203 Op 2 . - CDS 428194 - 428481 320 ## COG2963 Transposase and inactivated derivatives - Prom 428617 - 428676 3.8 377 204 Op 1 . + CDS 428643 - 429491 242 ## EUBREC_0644 hypothetical protein 378 204 Op 2 . + CDS 429511 - 430077 127 ## Patl_2742 hypothetical protein - Term 430166 - 430212 -0.3 379 205 Tu 1 . - CDS 430238 - 430462 89 ## 380 206 Op 1 . - CDS 430886 - 431332 312 ## Blon_2087 proline symporter 381 206 Op 2 . - CDS 431190 - 431813 530 ## Blon_2087 proline symporter 382 207 Tu 1 . - CDS 431928 - 432020 57 ## 383 208 Op 1 . + CDS 431983 - 432192 232 ## gi|225351688|ref|ZP_03742711.1| hypothetical protein BIFPSEUDO_03285 384 208 Op 2 . + CDS 432197 - 432295 93 ## + Term 432327 - 432380 8.3 - Term 432481 - 432524 4.3 385 209 Tu 1 . - CDS 432534 - 432677 57 ## 386 210 Tu 1 . - CDS 432922 - 434103 827 ## Apar_0201 hypothetical protein - Prom 434125 - 434184 2.3 + Prom 434784 - 434843 3.3 387 211 Op 1 . + CDS 434900 - 435406 370 ## COG3600 Uncharacterized phage-associated protein 388 211 Op 2 . + CDS 435399 - 435890 110 ## Balac_0578 hypothetical protein 389 212 Op 1 . + CDS 436090 - 436893 731 ## BLJ_0404 hypothetical protein 390 212 Op 2 . + CDS 436862 - 437071 93 ## BLJ_0404 hypothetical protein + Term 437205 - 437236 0.0 391 213 Tu 1 . - CDS 437252 - 437617 380 ## COG3304 Predicted membrane protein - Prom 437767 - 437826 3.8 + Prom 437765 - 437824 2.7 392 214 Tu 1 . + CDS 437870 - 438130 64 ## gi|225351696|ref|ZP_03742719.1| hypothetical protein BIFPSEUDO_03293 393 215 Op 1 . - CDS 438125 - 440197 1289 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 394 215 Op 2 38/0.000 - CDS 440234 - 441049 742 ## COG0395 ABC-type sugar transport system, permease component 395 215 Op 3 35/0.000 - CDS 441054 - 441971 460 ## COG1175 ABC-type sugar transport systems, permease components 396 215 Op 4 6/0.000 - CDS 442067 - 443242 1182 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 443339 - 443398 7.0 397 215 Op 5 . - CDS 443442 - 444437 336 ## COG1609 Transcriptional regulators - Prom 444462 - 444521 2.4 398 216 Tu 1 . - CDS 444719 - 444859 74 ## 399 217 Tu 1 . - CDS 445031 - 446047 582 ## COG1609 Transcriptional regulators - Prom 446213 - 446272 5.8 + Prom 446177 - 446236 4.1 400 218 Op 1 35/0.000 + CDS 446319 - 447707 1696 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 447744 - 447796 10.1 + Prom 447709 - 447768 3.1 401 218 Op 2 38/0.000 + CDS 447886 - 448773 1000 ## COG1175 ABC-type sugar transport systems, permease components 402 218 Op 3 . + CDS 448770 - 449591 640 ## COG0395 ABC-type sugar transport system, permease component 403 218 Op 4 . + CDS 449604 - 452303 2876 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 452350 - 452410 23.3 - Term 452343 - 452391 11.7 404 219 Op 1 . - CDS 452456 - 453961 1725 ## COG0489 ATPases involved in chromosome partitioning 405 219 Op 2 . - CDS 454077 - 454706 447 ## COG0394 Protein-tyrosine-phosphatase 406 219 Op 3 . - CDS 454737 - 455243 818 ## BAD_1356 hypothetical protein - Prom 455428 - 455487 3.6 - Term 455416 - 455456 5.1 407 220 Op 1 . - CDS 455494 - 455694 336 ## COG1476 Predicted transcriptional regulators 408 220 Op 2 . - CDS 455684 - 456100 591 ## BBMN68_993 protein + Prom 456329 - 456388 4.3 409 221 Tu 1 . + CDS 456459 - 460850 5951 ## COG0366 Glycosidases + Term 460905 - 460963 17.1 - Term 460869 - 460901 4.0 410 222 Tu 1 . - CDS 461139 - 461405 64 ## + Prom 461154 - 461213 7.0 411 223 Op 1 . + CDS 461389 - 462195 744 ## Blon_2110 glycosyltransferase 412 223 Op 2 . + CDS 462207 - 463202 963 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 413 223 Op 3 . + CDS 463216 - 464592 1095 ## LBA1727 polysaccharide polymerase 414 223 Op 4 . + CDS 464585 - 466189 1164 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 415 223 Op 5 . + CDS 466186 - 467250 932 ## SOR_1646 glycosyltransferase_GTB_type [Streptococcus oralis] 416 223 Op 6 . + CDS 467255 - 468301 904 ## BLLJ_0374 hypothetical protein 417 223 Op 7 . + CDS 468304 - 469404 502 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 418 224 Tu 1 . + CDS 469469 - 470626 848 ## BF2806 hypothetical protein + Term 470645 - 470688 -1.0 419 225 Tu 1 . - CDS 470755 - 473787 4054 ## COG0366 Glycosidases - Prom 473990 - 474049 5.7 + Prom 474324 - 474383 3.5 420 226 Tu 1 . + CDS 474431 - 474931 527 ## BAD_1353 hypothetical protein + Term 474971 - 475024 17.4 - Term 475000 - 475045 4.1 421 227 Tu 1 . - CDS 475053 - 476051 1265 ## COG3583 Uncharacterized protein conserved in bacteria - Prom 476149 - 476208 3.3 - Term 476230 - 476275 9.0 422 228 Tu 1 . - CDS 476299 - 476664 478 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 476727 - 476786 2.4 + Prom 476615 - 476674 1.9 423 229 Tu 1 . + CDS 476864 - 477475 767 ## BDP_1813 hypothetical protein 424 230 Tu 1 . - CDS 477448 - 477573 71 ## gi|225351731|ref|ZP_03742754.1| hypothetical protein BIFPSEUDO_03328 - Prom 477615 - 477674 2.3 425 231 Tu 1 . + CDS 477607 - 478455 768 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 478461 - 478520 2.7 426 232 Op 1 . + CDS 478588 - 479676 934 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 427 232 Op 2 . + CDS 479732 - 480136 672 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Prom 480152 - 480211 2.3 428 233 Op 1 . + CDS 480246 - 481481 1369 ## COG4850 Uncharacterized conserved protein 429 233 Op 2 . + CDS 481555 - 484080 2151 ## COG1770 Protease II 430 234 Tu 1 . + CDS 484213 - 485253 1521 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 485261 - 485296 0.5 + Prom 485301 - 485360 2.2 431 235 Op 1 . + CDS 485426 - 486169 890 ## COG2314 Predicted membrane protein 432 235 Op 2 . + CDS 486169 - 487311 804 ## COG0095 Lipoate-protein ligase A 433 236 Tu 1 . + CDS 487483 - 488208 598 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 434 237 Op 1 . + CDS 488310 - 490613 2244 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 490655 - 490688 5.1 + Prom 490637 - 490696 2.4 435 237 Op 2 . + CDS 490807 - 491943 1220 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 491991 - 492043 18.5 - Term 491976 - 492034 20.6 436 238 Tu 1 . - CDS 492068 - 493216 1299 ## COG0167 Dihydroorotate dehydrogenase - Prom 493320 - 493379 4.2 + Prom 493282 - 493341 4.7 437 239 Op 1 . + CDS 493389 - 494117 644 ## COG1349 Transcriptional regulators of sugar metabolism 438 239 Op 2 . + CDS 494068 - 494211 97 ## BAD_1333 DeoR-type transcriptional regulator 439 239 Op 3 8/0.000 + CDS 494217 - 495467 1767 ## COG1085 Galactose-1-phosphate uridylyltransferase 440 239 Op 4 . + CDS 495499 - 496749 1630 ## COG0153 Galactokinase + Term 496771 - 496827 23.2 441 240 Tu 1 . + CDS 496911 - 497138 346 ## BDP_1788 multidrug resistance protein + Term 497154 - 497217 11.1 + Prom 497302 - 497361 5.9 442 241 Op 1 9/0.000 + CDS 497421 - 497693 479 ## COG3830 ACT domain-containing protein 443 241 Op 2 . + CDS 497733 - 499097 1906 ## COG2848 Uncharacterized conserved protein 444 242 Tu 1 . - CDS 499461 - 500156 925 ## COG0219 Predicted rRNA methylase (SpoU class) 445 243 Op 1 . + CDS 500146 - 501090 800 ## COG1194 A/G-specific DNA glycosylase 446 243 Op 2 . + CDS 501142 - 501789 576 ## BAD_1320 hypothetical protein 447 243 Op 3 58/0.000 + CDS 501884 - 505513 849 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 448 243 Op 4 . + CDS 505605 - 509618 5157 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 509670 - 509717 12.5 + Prom 509659 - 509718 2.2 449 244 Tu 1 . + CDS 509822 - 510499 665 ## BAD_1317 hypothetical protein + Term 510517 - 510576 6.1 450 245 Tu 1 . - CDS 510667 - 511383 607 ## BAD_1316 hypothetical protein - Prom 511407 - 511466 3.0 451 246 Op 1 . - CDS 511485 - 512360 801 ## COG0631 Serine/threonine protein phosphatase 452 246 Op 2 . - CDS 512357 - 514840 2343 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 453 246 Op 3 . - CDS 514837 - 516021 790 ## BAD_1313 hypothetical protein 454 247 Op 1 . - CDS 516147 - 517484 1336 ## COG0714 MoxR-like ATPases 455 247 Op 2 . - CDS 517545 - 523580 5471 ## BAD_1311 fibronectin type III domain-containing protein 456 248 Tu 1 . - CDS 523686 - 525113 1208 ## COG0515 Serine/threonine protein kinase 457 249 Tu 1 . - CDS 525295 - 525525 84 ## + Prom 525316 - 525375 2.5 458 250 Op 1 5/0.021 + CDS 525527 - 529696 3646 ## COG0210 Superfamily I DNA and RNA helicases 459 250 Op 2 . + CDS 529693 - 533826 3302 ## COG0210 Superfamily I DNA and RNA helicases 460 251 Op 1 . + CDS 533975 - 535351 1273 ## COG0477 Permeases of the major facilitator superfamily 461 251 Op 2 . + CDS 535372 - 536190 1100 ## COG0289 Dihydrodipicolinate reductase + Term 536224 - 536258 2.3 462 252 Tu 1 . - CDS 536364 - 536687 272 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 536792 - 536851 3.2 + Prom 536771 - 536830 2.6 463 253 Tu 1 . + CDS 536872 - 539841 2429 ## COG2217 Cation transport ATPase 464 254 Op 1 9/0.000 + CDS 540329 - 541234 984 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Term 541277 - 541333 4.4 + Prom 541301 - 541360 2.9 465 254 Op 2 . + CDS 541414 - 543525 2369 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 543645 - 543691 14.0 + Prom 543568 - 543627 4.0 466 255 Tu 1 . + CDS 543721 - 546330 3546 ## COG0308 Aminopeptidase N + Term 546355 - 546387 2.6 467 256 Tu 1 . + CDS 546559 - 547368 620 ## gi|225351780|ref|ZP_03742803.1| hypothetical protein BIFPSEUDO_03377 + Term 547481 - 547529 0.9 - Term 547467 - 547515 0.9 468 257 Op 1 . - CDS 547530 - 550208 970 ## COG1404 Subtilisin-like serine proteases 469 257 Op 2 . - CDS 550217 - 551608 872 ## BDP_1576 CD9/CD37/CD63 antigen - Prom 551683 - 551742 3.3 + Prom 551806 - 551865 5.5 470 258 Op 1 . + CDS 551928 - 552239 351 ## BDP_1575 hypothetical protein 471 258 Op 2 . + CDS 552282 - 552569 444 ## BDP_1574 [protein-PII] uridylyltransferase + Term 552580 - 552632 15.4 472 259 Op 1 . + CDS 552666 - 553136 304 ## gi|225351786|ref|ZP_03742809.1| hypothetical protein BIFPSEUDO_03383 473 259 Op 2 . + CDS 553194 - 554975 1354 ## COG1404 Subtilisin-like serine proteases 474 259 Op 3 . + CDS 555011 - 556516 819 ## BDP_1571 hypothetical protein 475 259 Op 4 . + CDS 556600 - 557757 429 ## BDP_1570 hypothetical protein 476 259 Op 5 . + CDS 557834 - 558886 765 ## BDP_1569 hypothetical protein 477 259 Op 6 . + CDS 558984 - 559412 358 ## BDP_1568 hypothetical protein 478 259 Op 7 . + CDS 559384 - 560526 644 ## BDP_1567 hypothetical protein 479 259 Op 8 . + CDS 560526 - 561560 449 ## BDP_1566 transRDD family protein 480 259 Op 9 . + CDS 561560 - 565486 3369 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Prom 565577 - 565636 2.6 481 260 Op 1 . + CDS 565672 - 567054 1709 ## COG1109 Phosphomannomutase 482 260 Op 2 . + CDS 567118 - 567774 919 ## COG0242 N-formylmethionyl-tRNA deformylase + Term 567881 - 567916 8.1 483 261 Tu 1 . + CDS 568309 - 569829 1221 ## BAD_1292 DNA polymerase III + Term 570021 - 570081 0.2 + SSU_RRNA 570445 - 570758 100.0 # D86187 [D:1..1513] # 16S ribosomal RNA # Bifidobacterium pseudocatenulatum DSM 20438 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Predicted protein(s) >gi|222441571|gb|ABXX02000002.1| GENE 1 2 - 191 126 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351308|ref|ZP_03742331.1| ## NR: gi|225351308|ref|ZP_03742331.1| hypothetical protein BIFPSEUDO_02901 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02901 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 63 1 63 64 99 100.0 8e-20 MVSVGDRDSRPDIVKCRISERRGTLVSTNNKRKALALLTAVVTLAGGLTAGTAYAGGEAG NRP >gi|222441571|gb|ABXX02000002.1| GENE 2 302 - 1312 819 336 aa, chain - ## HITS:1 COG:no KEGG:BLD_0377 NR:ns ## KEGG: BLD_0377 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 56 277 37 265 317 112 41.0 2e-23 MDRIMILDADGPADPISCEPKKQGGQMTEKEETFELSSEPMEEKTKKPHRGRAVAIIAVA VIALLAAGGIVWKTHTDRLMAEAKADCAAASERLHVATTAYNALLNGKAASMAKTDVKSV KDAKTLDVLSKAMKASTPKTVSCKADSRDAVVTATKAITANTAWYWTHGKSLNRLVNAVE TSKLDKTVDDANALYKQTDGKVADDKTRASLLDAIKKRDADAIAKAVKEVNESKTAREKA DAEAAAKAKAEQEAAAQAAAAAAAQSQRQAQSYTPSYTNAGTSSGRSYTNAGSAGASSDS TGGSSSGGSGWSGPTSGGHGDPGACSLEDCSIPIQH >gi|222441571|gb|ABXX02000002.1| GENE 3 1312 - 1593 230 93 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1192 NR:ns ## KEGG: BLIF_1192 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 87 4 97 98 96 68.0 3e-19 MNLTPRPRDLTALLNSDRTEPADTGRPESVETGIPKNRRTVKPNDAEGWVKTSVSLRAST RRRLKTYAAEHDMRIQEVVDSALEMYLGLNGGE >gi|222441571|gb|ABXX02000002.1| GENE 4 1599 - 2270 924 223 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1193 NR:ns ## KEGG: BLIF_1193 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 223 1 223 223 389 91.0 1e-107 MNDKKTREPMVIALATGKGGSMKTTSAVFLACALVDQSRGEQRVLVADADVQGDAKDWWY LAAEIGDPLPFDVMSAAPADIKHLHGINDRLDDPVDWVLIDSAPYGRALDESVNNADLVV IPSSPSRIDLDQAAGVKSLCENRGIPAAILLCRTEANTTALRDALAWIDDSDIACFETLI PKRQDILNAKSTRPRGSRLHEYRDLAAELKQTMRQLKDKEEDL >gi|222441571|gb|ABXX02000002.1| GENE 5 2407 - 2904 373 165 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1194 NR:ns ## KEGG: BLIF_1194 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 6 165 1 160 160 258 86.0 5e-68 MNGRDMMPACARIAAVDPAMADRMWNTTTDDDGRDLVDERMRGKGRMLCAACPMRLDCIS RALVNGWKDKAVYGGLDYASRWILARLIARDLHIADGGLHRIPQSRVRDWLADHPDWAAR MRRDGRDYWRRTKRRQRSRRECTHDDPLFLPTEPVPKGLVQGSLF >gi|222441571|gb|ABXX02000002.1| GENE 6 2901 - 3155 235 84 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1195 NR:ns ## KEGG: BLIF_1195 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 84 1 84 84 143 86.0 3e-33 MTTRIDCSEAGFGEFLLANPQLDGHADLIWQLHAVYWRNKRLGHPKAVGLLIQYARAWAA RNPGETAIGRLQARKTPMTQGRRP >gi|222441571|gb|ABXX02000002.1| GENE 7 3152 - 4306 802 384 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1196 NR:ns ## KEGG: BLIF_1196 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 384 1 376 376 647 91.0 0 MSNIALSWAFRCHVGNASAKAVLVYLADRADDDGTAAYPKIATIVNVTELSERTVRAALK TLQERGFIRRGDQRYARLGKGGRNRLPQYCQVVWDLAVESDPSTLTWIRETHTAEQDPAT MGGTVDPMASTIVENGESKDVLPENVGTKPISSTANLAGLENDSETALQIPQGQHCESCT PSTANAAPPALQISQGCIYKDKTLQVNPPSKPSFPSAPTGHLPASGATAAEKNRTEQSDE DDTEIAEAAGRVLASLGEQRSMLGLATPSPTKADRKAIIGLYRRLVDQGAQWPTLVMVDA IGFAMNGDWWPKRIRTGRALARHWDELNDDMILAAGRTDGDAHAQTVPAAVPEPEAAPWL PDWAVETLAELDGQDATAGGEATA >gi|222441571|gb|ABXX02000002.1| GENE 8 4303 - 4458 135 51 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1197 NR:ns ## KEGG: BLIF_1197 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 51 1 51 51 73 90.0 2e-12 MNWLAIVLIVFVAFSWLMTLSLCRAARLGDEQAARLDTERRAAQQREEERP >gi|222441571|gb|ABXX02000002.1| GENE 9 4455 - 4646 85 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291457746|ref|ZP_06597136.1| ## NR: gi|291457746|ref|ZP_06597136.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213] hypothetical protein HMPREF0177_01343 [Bifidobacterium sp. 12_1_47BFAA] conserved hypothetical protein [Bifidobacterium breve DSM 20213] hypothetical protein HMPREF0177_01343 [Bifidobacterium sp. 12_1_47BFAA] # 1 63 1 63 63 114 95.0 4e-24 MNDFTKAFRMSCSVFPECNRDFQAPVWTFPVVAAFARHNGPVSTDSRRLASMMAHPSMEG RLA >gi|222441571|gb|ABXX02000002.1| GENE 10 4822 - 5649 360 275 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351317|ref|ZP_03742340.1| ## NR: gi|225351317|ref|ZP_03742340.1| hypothetical protein BIFPSEUDO_02910 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02910 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 275 1 275 275 573 100.0 1e-162 MKLFNGYVLGTSGGGKSFDVKVRKADDFAFDEPIVIDPEKLGVDVAAKCINGKDPLHAVV LGGVFTPYGPLLTDDYGRSIRFAEYGDGPCRFGDRPIQVMKPYEWLADRVYVFDDEAVAS SKHDVFRFVVEACRCFVGGDGDHDRSVVLCREGVAEQLDLSSDAFAPMVGADGNAVRFSY QPCDRLRCVCSTNPQKGLGVFHVWTERGTTYQAVLGPCAYECRPEKALTLPDELWSRNES WMRDFFEQETSDFLCLGVVSRRTNIRFVEGGGAMV >gi|222441571|gb|ABXX02000002.1| GENE 11 5646 - 6014 252 122 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1199 NR:ns ## KEGG: BLIF_1199 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 122 1 122 122 169 71.0 2e-41 MAGGIFEQYNWPEGRSDYVEVCDGCHTAIWSTRWNEETSDGFDAFLAENGWRDYIDQLDS RILNLCPACALLALRLGETCGLADTWLRPTHAYTHAFREVDAQLSTRERVVANLLLTEGR AA >gi|222441571|gb|ABXX02000002.1| GENE 12 6014 - 6256 155 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351319|ref|ZP_03742342.1| ## NR: gi|225351319|ref|ZP_03742342.1| hypothetical protein BIFPSEUDO_02912 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02912 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 80 1 80 80 155 100.0 9e-37 MGLTMSNMKRWMAEVGLTHRQLAVQLHQSPASVTQKVNLHTHWQRRDCAVLREQYGLSAD FVQDLIPYETAFPNGVQEVM >gi|222441571|gb|ABXX02000002.1| GENE 13 6397 - 6900 268 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351320|ref|ZP_03742343.1| ## NR: gi|225351320|ref|ZP_03742343.1| hypothetical protein BIFPSEUDO_02913 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02913 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 167 1 167 167 349 100.0 4e-95 MFNIANLLGMFAFTGRKNVCMGELMLSNVFLPAAQKTLHRLGEVVDIGIYGIDRSCWRCG RTSVAITNLCPLDCESGISLVEAWESIDMCYAKELLEIAGHPAAKQIKYRSSRRAGRYMS NGCAYCDALFGNFCIDEDILDGQKPRLIASVKRPLQEWAVMVAQFYL >gi|222441571|gb|ABXX02000002.1| GENE 14 6940 - 8007 1059 355 aa, chain + ## HITS:1 COG:Cgl0034 KEGG:ns NR:ns ## COG: Cgl0034 COG0652 # Protein_GI_number: 19551284 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 174 353 14 188 190 163 54.0 4e-40 MEVTETSEQVKIEAQRFEDVARYNIRRYMRLTGKIQKDLAHALGVSRPTITLMLKGETKL NLRQVFLIAKALGVTVEDLIDDTYYCQDEEFMKKLKPTTDAEKPGALVGAGAPRFLVSPF NPDAPAEGGISGAAKGALAGFVPSGVLSGSGSPSMPSKHDGIGVPGRSQAHETLGTMTTV IMRTTEGDIKINLFDDKTPETVANFLGLATGEKEWADPFTGQPSHKPFYDGLTFHRIIKD FMIQGGCPLGTGTGGPGYNFDDEIVPGLTFDRPYLLAMANAGLRRGMDGKIHGTNGSQFF ITTVPTEWLNGHHTIFGEVADDESKAVVDKLDSVATDRSDAPLEPVGITSIEVLK >gi|222441571|gb|ABXX02000002.1| GENE 15 8127 - 10448 2660 773 aa, chain - ## HITS:1 COG:MT2660 KEGG:ns NR:ns ## COG: MT2660 COG0317 # Protein_GI_number: 15842122 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Mycobacterium tuberculosis CDC1551 # 19 762 62 792 793 813 55.0 0 MGDVEREVHSARMLGCEISTNPLDPLEPILKMCEYHHPDEDISILERAYERAVKQHSSQR RKSGEPYIIHPLAVAQILADLGMGPLVVAAGLLHDTVEDTDYTLDECRAEFGDTVTGLVD GVTKLSKMEYGDSAQAETIRKMVVAMSRDVRVLVVKLADRVHNARTWRYVKTPSAQKKAH ETLDVYAPLANRLGMNAIKTELEELSFKVLYPKIYNEIVVLVARRAGQRDVYLKQILAEI NEDLDEQNITAYVTGRPKDYFSIYQKMIVRGHDFANIYDLVGVRIIVDTIQDCYAALGAV HARWNPVPGRFKDYIAMPKLNMYQSLHTTVVGPGGKPVEIQIRTWDMHRRAEFGIAAHWK YKENGQAGRALSSPDKSDRKRGENQELSEADNFKWIQQLADWTSETPDSNEFLGSLKEDL GAAEVYVFTPKGKIVSLPAEATPIDFAYAVHTEVGHRTMGARVNGRLVPLDTKLENGDTV EVLTSKSESAGPSRDWLSFTKSPKARNKIRQWFSKERRTEAIEEGRDELTRAMRKRNLPI ATLLTPEALVGVADELNLANAEAVFVAIGEGQISTQNVISHLVRDAGSDEVNEEVEQEAL PLKQVERTKKTTSSLGISVKGVGDIWVKLARCCMPVPGDNIIGFITRNQGVSVHRVDCQN MLDLQKRQPERVVDVQWTSTKGVFMVKIQVEALDRPHLLSDVTRVLSDHGVNIISGSIST GTDRVATSQFSFEMADPQHLNTLLAAVRKIEGVFDVYRITGAKDSAEPRLRKI >gi|222441571|gb|ABXX02000002.1| GENE 16 10602 - 11078 519 158 aa, chain - ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 31 155 22 146 149 139 58.0 2e-33 MAFDEAYNEPENVEVLVKSLDPDHPAELYYAHAGDAGADLRTTEEVTLKPFQRALVPTGV AIALPAGYVALVHPRSGLAVKQGVTVLNAPGTIDAGYRGEIKVPLINLDPEHTVTFHPGD RIAQLVIQRYVEAKFIEAETLPGSDRAERGFGSTGVAS >gi|222441571|gb|ABXX02000002.1| GENE 17 11078 - 11371 480 97 aa, chain - ## HITS:1 COG:no KEGG:BAD_1004 NR:ns ## KEGG: BAD_1004 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 97 7 103 103 148 95.0 7e-35 MAQDYDSPRNKDEDEESLQALGKSSQNTSNDMDDDENAIAEDYELPGADLSNEDASVTVI PMQGDEFICSECFLVKHRSQLAYTTDDGQPVCQECAA >gi|222441571|gb|ABXX02000002.1| GENE 18 11521 - 12576 559 351 aa, chain + ## HITS:1 COG:no KEGG:BDP_1401 NR:ns ## KEGG: BDP_1401 # Name: not_defined # Def: putative DNA binding protein # Organism: B.dentium # Pathway: not_defined # 1 351 1 339 339 404 70.0 1e-111 MPGNSLEEARFDHVSDTGELVFVSGAGKFAVKIDEALERAILEAKQIRSEVQEEQKTRIP PTLPISQIQSLIRAGADPARVAERYSLSEALVRRFSASVETEKQYAIEQFLAVPAPKESR VRTLSELIERTFAAARVRLEDVTWKATRLGLEPWKISAQFVSSGHNVCAEWSWNMHDNAV SCLNSAARKLIGEQDTSKEGHAEKHADENFLVSLNLPGNSARSARIEQTVSAWNTPEPSM PAARPAAAPSVPIAPIGGVSNESDTPDTPNAPAIASDLPLPSRPENPAAGANTASATNTD TRNTVPSTPEPASNMANENQTLDPHSQNTTKSKRRAGRSAVPSWDEILFGD >gi|222441571|gb|ABXX02000002.1| GENE 19 12579 - 13766 808 395 aa, chain - ## HITS:1 COG:Ta1349 KEGG:ns NR:ns ## COG: Ta1349 COG1524 # Protein_GI_number: 16082335 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Thermoplasma acidophilum # 61 389 62 411 421 67 22.0 6e-11 MTEPACYGDDVSSEGTRGGALHLSSVLPAVSNAIGYPMPTAVHPDPKRLQGALGIPDATS VVVALVDGLGYWNLNMRLGHAPYLRALMNDTANQRPIATCMPSTTVAAMSTFGTGTCPGM TGMTGYTQLNPKTDEICQLISFKNAIPPLELQQQPTIFERLSAQDVRVTSSGLPKFAFSA LTQAALRGSDYISNDDPRKRIAAAAQAAKTPGLTYLYLRDTDKVGHNYGWDSDKWIGTYE RVDAQLGLLRRSVPKGTLIVIVADHGMITTDPESVIDIAQDQRLMQGVAHVGGEPRCVML YAEQGENPEDIATRWRSVLEDRAQVRTRSQAMDEGVYGPVEARVEPMIGDVIVSAAKVVT IVDSRTQAEKAMHLPSVHGSLTMLESDIPCLIDVA >gi|222441571|gb|ABXX02000002.1| GENE 20 13891 - 16578 2494 895 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 21 769 7 692 830 495 39.0 1e-139 MVSHRKPAKPAFDPRTVKENIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR IIYQMGQMNLNPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG NFGSLDDGPAASRYTEARMAQAALGMNANIGENTVDFTPNYDNKLQEPTVLPAAIPNLLV NGGSGIAVGMATNMATHNLGEVVAAAKHLMHHPDATLEELMRYVPGPDWPSGGVIVGRNG IREAYETGRGALTTRSVTHIENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGI SGVIDLTDRHNGTRLVIEIKTGFDPNAVLAQLLKHTPLQDNFTINNVALVNGRPHTMGLK EMLQVWVDHRRVVIRRRSEFRKKKALERLHLVEGLLLAMVDIDEVIQVIRSSDDADAAKT KLIAVFDLDEIQAQYILDLRLRRLTKMSRIELESERDDLKQRIEELDRILASAEALDNVV ISEMDEAVATYGTPRRTVLLDEDADGKLVPVVAHGDDGVSASAMAAARAAATVSSAAADV AAAAKAATKAGEDNAAAVALQIDDEPCAVMLSATGLIARTSEDALERWENRSSADKRVRD DQIISIFPTTTRSSYGLITSAGRLIVAHVVELPVVSADGPLHVTGGVHAEELIGMTENTD PIRGERVIAAIAMPTADDSGDHAAEPAPLALGTRNGVIKRWNRESPTTMDSWSIIDLKDD DEVLAAAEARDEDRLVFVSTDSSLLTFDAKNVRPQGRTAGGMAGIRLAEGCSVAAFAVIP ANKVAWNYEEGDNGLFSASGAVVLTVAGDSEALPGTENGSAKVTPLEMYPTKGRGTGGVR SQRFLKGQDTLILAFVGTYPVHASTEGGAGVELPKPDMRRDGSGTELSAPIAIVG >gi|222441571|gb|ABXX02000002.1| GENE 21 16711 - 21324 2232 1537 aa, chain - ## HITS:1 COG:Cgl0823 KEGG:ns NR:ns ## COG: Cgl0823 COG1201 # Protein_GI_number: 19552073 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Corynebacterium glutamicum # 42 1459 1 1387 1478 963 41.0 0 MYECLNLFSEPTKAWFKHAFSRPTEVQQQVWPAIHSGENVLVVAPTGSGKTLCAFLSALD RLMAGGTRSAGVDVHGEIAAAKSHAEQKAAGKGSRKKTKRGVKVLYISPLKALGADVAKN LELPLQGISQQYEAMELPIPDVEVAMRSGDSTPEQRRRIVSHPPDILVTTPESLFLLLTS KANSILTSVETVIVDEIHAVAGTKRGAHLAVSLERLDKLIGHPVQRIGLSATVNPVEEVA RFLGGSQPVTVVNPGAVPAMDLKAVEPLRNMLDTSATGGSVWPVIERSILDEVLRHRTTL IFVNSRGLAEKLTARLNDMYAESKQGTVATDLSEHRDLGSPEGREQFAGHYDSVVGSTTM LVESHEDIDAIAMAHHGSVSKDRRKQIEEQLKRGELRCVVATSSLELGIDMGSVDLVVQV AAPLSIASGLQRVGRADHNVGGVSHALFFPITRQQIIGVTTSMECMREGAIEPLHMPRNP LDVLAQQTVAAAAMEDLSTNDWYELVRRSAPFQNLDRSMFDAVIGMMTGAYNSESFSAFR PPLQYNEEAKLISARPGAQRLAVTSGGTIPDRGMYAVVLPEEGSGPGPRRVGELDEEMVY ESRVGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLPFWHGDQDGRDYGFGLAQGRLTR ELSQGLHRREPAKNGDQNTAQTVLEAQFNRETAQRLERDGLDHNAISNLAKLLDEQCEAT GTIPSDRDLVVERCRDEGGDWRIIIHSPYGRRVHEPWALAITTRIKQRFGFDGQVYAVDD GIVLRLPDGYGDLPTRELLLFDVDELQRTVETQVGESVLYMARFRECAARSLFLPRTRPG KRVPLWQQRLKAAQLLNAARTCKNFPLLLETARECLQDVYDLPALRTIMTGLHAGTILLS EATTETPSPFAQNMLFGFVGSVMYQYDVPQAERSTQLLSMDLEVLERLLGSTDMASLLDA EAITQVEGELAGRTFWNDLAEEDISGRVTRYAKTHGPFTADKMIAELGIDAAQAVHALDE LDARGELIKGRFTDSGETSEKNDIQQWLHKDVFRRIRALSLAKARKAVKPVDPSVYQAFL LNRQGVGPVGGERYEGVDGLMRVIEQLEGVFLNASVWESMVFPARVRDYQPSMLDELISS SDVVWVGSKASGSNAKEAGEIAFYPAGSLLLNQPESAVDKLNDNETLIMPDAVLTALSGG GAFPIQLLSAVTKTIWLEHAEAQVNPETGEIIFPAWGERQFEEALWSLVWQGKMTNSSFA PVRALLHGGKTVRAPRRAARRRVTMRPPTPLALSGLWSAVSCGDGRTVMPNKPLDGVIEP GMLENSDTGIGMAHTASVEERELALIDSLLDRYGVIAAPLVDKERIAGGFSALYPVLKRM EEHGTLVRGMFVKGFGAAQFAERDTVDALRSDTQWHSQSCVALDVIDPANLTGSAIAWPE QDYLKPARRSGSIIVLKQGEPVLFSVPKSHKIVSFTADETILRPSCAELAYVLQRQPSGS ISFSEMNGTSLKARNEYRQILYAAGFVDSPQGMKLYC >gi|222441571|gb|ABXX02000002.1| GENE 22 21354 - 21569 231 71 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 1 66 1 66 67 93 66 1e-17 MAIRVNLDVMLAKRKMSVNELAEAIGITPVNVSVLKNGRAKAIRFSTLDTICETLCCQPG DVLEWVADEDE >gi|222441571|gb|ABXX02000002.1| GENE 23 21571 - 22104 418 177 aa, chain - ## HITS:1 COG:no KEGG:BDP_1407 NR:ns ## KEGG: BDP_1407 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 11 177 1 167 167 158 58.0 9e-38 MPNSAAKRSMVIGVLRVLIVIIAICCLGLQFSAIAASAGVASKYADADSMHWLYAVAAVL IVACFEFALVPLWRLLTLVEKRDVFSGKAMRWVNHILVYAGIEGMLVLAVMVGQIWLSPS RFLMAAMGVDGQMFPYVVLAVGVAALLLIAAFELLMVVMRSLLMQAIEQRDELAAVI >gi|222441571|gb|ABXX02000002.1| GENE 24 22261 - 23748 526 495 aa, chain + ## HITS:1 COG:no KEGG:BDP_1408 NR:ns ## KEGG: BDP_1408 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 36 490 2 456 458 541 60.0 1e-152 MPEPANTSPSQTSQSQQSSPLPEAQETQETPKTQGSQPTHEPSAHQEEQPLAKPKITREE IAQRPLNKRAVITIGAAFLITFAFDRLICSIPPTWLIGYELPVFWIICALTVTALHWKTA RKQVLVWLVLGSIVAIGVWNTLAQSTWCYSRNDEYALTTQFVQPALLMLHCQLVNGRYDV RRPLQVAWNWLTGWLQQPFIHIRDFAEPFSVIFARFAVASKQRSKAREIGIALLISTPLL LTIVPLLIGADQIVQYEVLNVFSDFNPMTITLHIMFIVLPWPLLFSLLIGLDDEPTSTPP EQRFSLSSVTAFVVLAVTLTVYMLFCIVQIRFLFAGLFTDGSIALPDGLTYSEYARGGFF QLLAVTAINVTLFGLAIALAPRTRMLNAALVALLALTAVILASAALRLGLYINAYGLTWL RYLSASFIALLAIAILLCLIRLKIRQLPLAATMTALLIVWYVALGFSNPNHICEIHNAAH GIAMAMATTPYQSMV >gi|222441571|gb|ABXX02000002.1| GENE 25 23733 - 24938 1181 401 aa, chain - ## HITS:1 COG:ybjJ KEGG:ns NR:ns ## COG: ybjJ COG0477 # Protein_GI_number: 16128813 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 9 383 17 380 402 63 23.0 6e-10 MVNLLLAVIYVAFISLGLPDAVLGAAWPTMSVDLGAPISWAGGISMTISAGTIVSALLSD RMTLRFGAGKVTAVSVALTALALFGFSVAPNYWVLILLAIPYGLGAGGVDAALNNYVAIH YESRHMSWLHAMWGIGALTGPYIMGFALGAGQGWSWGYRYISILQVVLTAILIFSLPLWK KRSEVKTGEVSGESDGTANDETRKPLGVRGVLAIRGAKEILVMFFCYCALEQTAMLWASS YMALGKGIDKTTAAMWASLFCIGITVGRLASGFLTMKFNDPAMIRLGQALVLTGIVIMLL PLPRNIGTIMGLMIVGLGCAPIYPCVIHSTPAYFGEDKSQAIVGMQMACAYVGSMCMPPV FGLIAQHISVLWFPLYMLAFLVLMMIMHESLRKKCAGQTID >gi|222441571|gb|ABXX02000002.1| GENE 26 25145 - 27436 2585 763 aa, chain - ## HITS:1 COG:Rv0005 KEGG:ns NR:ns ## COG: Rv0005 COG0187 # Protein_GI_number: 15607147 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis H37Rv # 3 755 46 708 714 496 40.0 1e-140 MAKYKDNYGAGSLTVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGVCNH IVVTLHSDGSVEVADNGRGIPVDIEPKTKLTGVEVVLTKLHAGAKFGNSSYGASGGLHGV GSSVVNALSSRLDVEVDRDGKTHHMSFHQGHPGVYTDADPEHPSPDAPFKRTRKNRPTEL EIIGKVSPKTTGTRIRYWADPEIFNDTAEFSYEQLIDRVRQTSFLVPGLKITVIDENIPE TGDESVDEMLEVDDIANAAGDEPQEIAESDESEHDAAGHEEAAEQIEEADVAAQPQGSKY THSRIEEFCHTGGVKDFVDYLSKGEAVSAIWRITGEDTYVEETQAVGDGGELHAQKVTRN CAVDIAMRWTNGYDTTMRSFVNVVETPGGGTHVDGYLLGLTKQIRKAIEDNARKLKVNLK DSNMKVERDDILAGLVAVVTVRIAEPQFQGQTKDVLGTAQVKPIVSKMTDRQFGEMITGS KRGYKEQSGRVLEKIVGEMHARIQARKTKEVTRRKNALESASMPPKLSDCQPGNDDVAEL FIVEGDSALGTAKAARNSGFQALLPIRGKILNVQKASLSQMLSNKECAAIIQVVGAGSGA SFDIEQARYNKVIMMTDADVDGAHIRILLLTLFYCYMRPLIEYGHVYAAVPPLHRIALTG AHKGEYIYTYSDDELAGKLADLDKKHISYNEDIQRYKGLGEMDADQLADTTMDPRTRMLR RIRMEDAEQASQIFSLLMGDDVPPRKAFIVENADDFDRSKIDT >gi|222441571|gb|ABXX02000002.1| GENE 27 27561 - 28937 1736 458 aa, chain - ## HITS:1 COG:ML1022 KEGG:ns NR:ns ## COG: ML1022 COG0568 # Protein_GI_number: 15827492 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium leprae # 2 457 81 574 574 416 54.0 1e-116 MATKETTASMEQADLTEKTTSTKKAATRKASTKKSAAKKTTATKTPRKTTAKKSAPAKKE EPLEDDALDDEDAQVDDADLDDFDADLDDVDSDDEDDLDDDEESEPEDDDDEDEEERKKP EEPKEKGAFVVRDDDDDENLTPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVD LSERIEAGLYAQHLLDTESDQMDFKRKRELKWAANDGRRAKDHLLEANLRLVVSLAKRYT GRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVH MVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDG DSEFGDLIEDTDAIAPSDAVAFSLLQEQFRQVLETLSPREAGVIKMRYGLEDGQPKTLDD IGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ >gi|222441571|gb|ABXX02000002.1| GENE 28 29099 - 29755 273 218 aa, chain - ## HITS:1 COG:no KEGG:BAD_1012 NR:ns ## KEGG: BAD_1012 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 218 3 214 214 200 47.0 4e-50 MTTNKTGRITGTEMEEAISRFERDCRSDGVGETVRSFIREPLFIWMDALAQASDESVSHS EGEFHAECGLDRNMIMRTTVGINRMLSIRDVFLISAIVDERYADRDFLMSFAERPKLSRN AQRLEQLLSDSFRDPLARPDMKRCDQAINMLFDIIDMIPKTYRAQPFAVISYIMWWMGQE GAMASAISALAIDDQCSLAAIVCSAVERRIGPAWTSET >gi|222441571|gb|ABXX02000002.1| GENE 29 29962 - 31056 720 364 aa, chain + ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 23 326 25 333 366 134 36.0 3e-31 MTSSSDLEQIESRIVSLVKDFAFLHADDSVASSCRPIADMVAKQAVTSSEGGKRLRSLLT LDSFRAFASEDVRERDFDALLDLACAVEVFQTGALVHDDIIDDSDLRRGKPSAHRAFSTG THSEAIGHGLGIMLGDMLATASVDIADKAASKLTHGSDVVAALLNMHREVEVGQVLDLAV ELNPLDDPDELVEASLNVFRWKTASYTTIAPLEFGMLAAGIGKDDARKQALAVGLPLGLA FQLADDLLDVVGSSSNTGKPVGGDIREGKRTVLLADAINAANDTQRRELIDMWEADSRSE TQVKRAIELFEQTGAIERSRGRIADLWNESKTAIETLSLSEYHESLLIEACSRFVPSIHV QTRA >gi|222441571|gb|ABXX02000002.1| GENE 30 31198 - 33408 1803 736 aa, chain + ## HITS:1 COG:MT2232 KEGG:ns NR:ns ## COG: MT2232 COG0515 # Protein_GI_number: 15841666 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 9 330 11 326 399 214 38.0 4e-55 MSEAPHAPEGQVIEGRYRVVSRIADGGMATVYQAVDERLERTVAIKIMHTQLAQGPHRDQ FVERFHREARSAAAIANPHIVQVYDTGEFDGLDYLVMEYVHGVNLRYEMNQQGTFSVRET LRIIGETLDGLASAHRAGVVHRDIKPENILLNDRGHVQITDFGLAKTVSQATLSSTGILL GTAAYLAPEMIEKNQATPQGDLYSVGIMAWEMLAGNVPFTSDNPVTLVFKHVHEDVPSIA AACKGINEGVAAFLAHLTARAVEARPADASVALTELQRLQSTLAVSDWQYRLPPVDVSAS DGAAPANNGAPTNVGNPVPPAPPAPPTQQFDDRTRKLDRVRTNATTVMPVQQQNIDPEAT TRFSLPADGIVNSLDNAVDSAASQSPIAQSDESGNTPNSKSAKKRRTPLIVAGVVALLLA CGAGGWAWWYYQGPGSYWTMPQPDGMTCDASAACPITNVKWSDYESLLKISDIEYEVSEE YSDSVEEGNIISTDPANVGDRGSKRRSQKVKVVVSKGVRQATVPADILDATSASGKDPIN ALKKAGFDNVEQTAASDDTYSIDVPQGALLSLSVDPGATLPHNTTITVTVSQGPKPVTMP DIVGKTKDEAQQALDDLRLTTNWTESFDDKIPQGQVISASVNNGDTLHWGDSVDVVVSKG PETITLPNYVGQKASDAKAALEKLGFTVKVSSQLTLDSNQDKKVASQDPVGGTEVRLRDE NGIPTTITLKMYSSLF >gi|222441571|gb|ABXX02000002.1| GENE 31 33505 - 34209 798 234 aa, chain - ## HITS:1 COG:MT2237 KEGG:ns NR:ns ## COG: MT2237 COG0204 # Protein_GI_number: 15841672 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 3 234 4 235 247 184 43.0 1e-46 MLYWFFVKGLGPIAIHRMGPTAKGLENIPREGGAIIAANHLAVIDDALLPLTCPRMIHFM GKAEYFEGKGIKGKFKKWWFTSVGVFPVDRSGGSKSLGALNHAREILEDGHLFGIHIEGT RSPDGRLYKGHTGAARLAFETGCPIVPSAIIGSRELQKPGQIIPGKGKTTVIYGEPIAVE KKPADQITHDDLRTLTDRVTMEIQKMSGQEYVNEYAQKVKEQLKAQKAAEQANS >gi|222441571|gb|ABXX02000002.1| GENE 32 34231 - 34833 394 200 aa, chain + ## HITS:1 COG:no KEGG:BAD_1016 NR:ns ## KEGG: BAD_1016 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 11 200 1 188 188 298 81.0 7e-80 MAIRLITVISMTDLNNSNADEERPNAAPNGGEGASSNADDLDAAWAEFASSHADDLQAVE HSRSAKRFEKHAQRREKEALLSIQDLDQGTFTDDTPQGRGPRDFTGSSWLDTDSVMDRYG DDFTPPNPSIGHVKISKLVFWVLLIAGVAGIIASAFMPALAGILGSIFGVCTLIGAAGLI VQHKGHTQTRRDVFDDGARV >gi|222441571|gb|ABXX02000002.1| GENE 33 34983 - 36035 965 350 aa, chain - ## HITS:1 COG:ML0883 KEGG:ns NR:ns ## COG: ML0883 COG0547 # Protein_GI_number: 15827406 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Mycobacterium leprae # 4 346 18 364 366 224 43.0 2e-58 MAEITWKSILTKLVGGDHLSAEESEWFVDDLMNGNANPAAVGAVLATQQQLGLTPDEVRG AAKAMVSHAIKLDIDGETTDIVGTGGDGAATVNLSSMGAVVAAAAGAKVVKHGNRAASSK CGTADCFEALGLPLDLEPEQVAEVGNECGIAFAFARTFHPAMRFVGPVRAALGMPCVFNV LGPLTNPASPKHMAVGCANRAMSPIMAAVYAANGQTGMVYTSSEGLDEMAPTGPVSIWEF SNGKVTESEFDPTVELGLDKVTVADLKGGEPELNAQLFRDFLAGKDVPFRTTALLNAASA IVADGHQVPADASLTERFKAAYAIAEETVDSGKASALLDQWITAAQSKKA >gi|222441571|gb|ABXX02000002.1| GENE 34 36295 - 39171 4048 958 aa, chain - ## HITS:1 COG:ML0779 KEGG:ns NR:ns ## COG: ML0779 COG0653 # Protein_GI_number: 15827340 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium leprae # 4 913 1 909 940 983 58.0 0 MVDIVDKALRMGEGRQIKKLEHVAQATDALEDEIAALNDEELKGQTAKFKQRLDNGESLD KLMPEAFATVREASKRTLGLRHFDVQLMGGAALHWGNIAEMKTGEGKTLVATLPAYLNAL DGQGVHVVTVNDYLASYQAELMGRVYRFLGMSTGCIITNQKPPERRKQYNADITYGTNNE FGFDYLRDNMAWEKSDLVQRGHHFAIVDEVDSILIDEARTPLIISGPAEGDVTRWYRQFA RLVLKLTRDEDYEVDEKKKVVGILDPGINKIEDYLGIDNLYEPNNTALIGYLNNAIKAKE LFLRDRDYVVTGGEVLIVDEHTGRILPGRRYNEGLHQAIEAKENVEVKAENQTFATITLQ NYFRMYDKLSGMTGTAETEAAEFMGTYKLGVLPIPTNKPMIREDKDDLIFRTKKEKLAAI VRDVAKRHKKGQPVLLGTASVESSEIVSSLLDVANIPHQVLNAKQHDKEAAVVAVAGRKG AVTVATNMAGRGTDIMLGGNVEFLADAKLKSEGYSPDDTPDEYEKRWPGTLAEIKEQVKD EHEEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFNTQLV ARVMAKGMPEGEPIEAKSVSKGVRTAQKAVESRNFEIRKNVLKYDDVMNKQRTVIYAERQ AVLKGEDIHEDILKFIDDTVLSYIKGANKGSDKPKDWDWEGLFKALNAVYPIAVDPEAAK DAVSKLKGDKAIVALQELIVSDAKDQYADFEAKLGEEGLRQLERRVVLAVLDRKWREHLY EMDYLKDGIGLRGMGQRDPLVEYQREGYQMYNSMIEAIKEETIQLLFHVDIDRVATTEDA ETESDEEEAVNAAEAVMGLDSEAQPTGETAPAEPETDDEAEKTVIDELAEEQKNEPGIVG MQPISHAEGKVPANKRPKSEELRSPWADGRTFPGTGKNAQCPCGSGRKYKMCHGQNEQ >gi|222441571|gb|ABXX02000002.1| GENE 35 39384 - 40043 1021 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23465978|ref|NP_696581.1| hypothetical protein BL1418 [Bifidobacterium longum NCC2705] # 1 219 1 219 220 397 90 1e-109 MEIVVTGRHTQIKQRFRDVVESKMNRVTAIAPDAQRVQIVLSHEGNPRQADTAKRVEITV IAGRTVVRAEASSADEFSALDMALDKLTLRLRRTRDRRKDHRRGYSDPVPVDLGVVEPTP EVEEPVEVPNNSPAEAVAAELGPGESVEVQVGDTPIVIRRKLHIAEPMTIDEALYEMELI GHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVAK >gi|222441571|gb|ABXX02000002.1| GENE 36 40060 - 40212 60 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIAKKRTKGKSKKLYFSCVNFSVKSQCCGYNVDYRTAKQLFGPYIAGNTA >gi|222441571|gb|ABXX02000002.1| GENE 37 40657 - 40887 262 76 aa, chain - ## HITS:1 COG:no KEGG:BAD_1023 NR:ns ## KEGG: BAD_1023 # Name: not_defined # Def: RecX-like protein # Organism: B.adolescentis # Pathway: not_defined # 2 75 157 230 231 114 83.0 9e-25 MELKRKGVDRQLAQRVCDEAESQGVFAEAAWELGRRTARKTAGLDVEVRKRRFWSAGGRK GHNPEVLRKIAQELFV >gi|222441571|gb|ABXX02000002.1| GENE 38 41341 - 42525 1434 394 aa, chain - ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 23 346 18 341 376 465 74.0 1e-131 MAQTSAAKGAAQNKSANGIDPRRQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTG SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVY ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH VGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYSSVRM DIRRIQTIKNGDEAVGNRTKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQVNV VKKSGSWFTYGGDQLGQGRENVRQFLKDNPELTEEIENKVKAEFGLIEPTDQFAEDGNEA SASNATSEEKAKADAGKPEAAKGAAKASKSAGKA >gi|222441571|gb|ABXX02000002.1| GENE 39 42781 - 43044 260 87 aa, chain - ## HITS:1 COG:no KEGG:BDP_1422 NR:ns ## KEGG: BDP_1422 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 11 87 1 77 77 133 80.0 2e-30 MDSSLCTLGHVQEREFWQLLEEVLGRSYGRALAHDQVLDRLGGMTAVDALGAGEEPRVVW NVLCDQMGIPDSQRWGKDHNAPPMPVR >gi|222441571|gb|ABXX02000002.1| GENE 40 43102 - 43614 603 170 aa, chain - ## HITS:1 COG:Cgl1917 KEGG:ns NR:ns ## COG: Cgl1917 COG1396 # Protein_GI_number: 19553167 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 81 158 11 88 107 60 51.0 2e-09 MEMMTLTKEQRELKAMAPATAQAAGARVRELTPAQRRAVMFAQQQVLRARAAKKAKDERQ AALTRMWQEEDSDRVRTHAVPHAQEQPDEAKEVSLREAIGHVLRDLRTRDHKTLREVSEK AGVSLGYLSEVERGQKEASSELLSSIAQSLGLSTAQMLRMVADYLDSVAA >gi|222441571|gb|ABXX02000002.1| GENE 41 43675 - 44241 210 188 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 10 177 743 896 904 85 37 3e-15 MTESMNQTAAANQSQCDELAAAVLAYCETNHFKIAAAESLTGGLLADAFVRVPGASKVFL GSAVTYDIRAKASILGVDAELLRSEGAVHPEVARQMAAGTARLYRQQGDGDCVIGLSTTG VAGPGPDGNKPAGLAYVGCSLPEGFGGVRSRRTEAFELRLQGDRESVRRGVVHCILQKLR ELSADSQE >gi|222441571|gb|ABXX02000002.1| GENE 42 44249 - 44929 228 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 7 208 471 663 904 92 33 3e-17 MEKQEERKSSLLDGWNVPPNLVTFSRIILVIVFLALYAKAGAWGVDNVTMRWVAAVIFII AACTDKLDGWMARKYNQVTELGKLMDPIADKLLTCGTLIVAAIFNEFGNPVLGWVVTALF LIREIGITVMRFFVIDTGGKVIAASQAGKYKTLCQCIGLAMLMLPMWSLAPEGVNDTPMW MTVYYTITYALIYFALILCLYSGGEYLVNTFGGRKKSAGKSGKETK >gi|222441571|gb|ABXX02000002.1| GENE 43 44997 - 47804 2674 935 aa, chain - ## HITS:1 COG:Rv2748c KEGG:ns NR:ns ## COG: Rv2748c COG1674 # Protein_GI_number: 15609885 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium tuberculosis H37Rv # 424 917 389 880 883 602 63.0 1e-171 MTVMARTASSNTKSGGKGSTGKARSGETKVMDAVEPSPVMGVLTKYGRDIACFILVILAV MFCASEWFRVQGVFGRMLHALASGLFGLMSVILPVFLALVAFSLIYETKRKSGNVRMVAG WSMILWSVCSILDAALASDAQGFDMALLQNAGGLLGYVLGCPLAWGLSKAFAIVIFVVVI LFSLLLITNTGVQEIPDKVRALKVRFGFGANKKVDDETEQFPNEVRIGDTTLSFAEGVPA HNGADDVAAEKKKPMPFSLIKQWISSKSKKQGAQDGLDHYDGDEAFRNAAERHGETAETM LDEPYQSVSRPRSISSDEHSAQDFGGTVAMPQTPVVRSLSSDPIGLASGTMPQIPETIPT VAGQAASDEIKSVGVAVGDPWAVIDEDGTSNGSQVMVDAATNEVVNDLDAGSNGEGVSDE SGEIPEGPYHLPDLGMLKQGAPHAVHTPENDRVIRALTVTFQQFNVDAKVIGFLRGPSVT MYEVELGPGVKVEKVTNLQKNIAYAVASSDVRILSVIEGKSAIGIEIPNTDRETVVLGDV LRSDKARNDPNPMLTGVGKDVEGHFVTADLTKMPHLLVAGATGSGKSSFINSMLTSVIMR ATPDQVRMIMVDPKRVELSAYAGIPHLLTPIITDPKKAAQALEWVVKEMDARYSDLEFFG FRHIKDFNAAVRAGKVHAPAGSKRKVAPYPYILVVVDEMADLMMVAKNDVESSIQRITQL ARAAGVHLVLATQRPSVDVVTGLIKANIPSRLAFATSSATDSRVILDSTGAETLIGQGDA LFLPMGQAKPLRVQGAWVDESEIRRAVEFVRTQRKPHYREDIEEMAKEADKKAIEPDEDI GGDMDVLLQAAELVVTSQFGSTSMLQRKLRVGFAKAGRLMDLLESRGVVGPSEGSKAREV LVQPQDLPQVLAFIKGETSSLSSGVSSAADSEAAM >gi|222441571|gb|ABXX02000002.1| GENE 44 47891 - 48100 194 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSAKIVTVNLEAKPEKTVDKVESFDEYGSGSFISGEVSEMMLGVGVRLCVYDVIGTCIG MFDDGHRVV >gi|222441571|gb|ABXX02000002.1| GENE 45 47993 - 49039 1277 348 aa, chain - ## HITS:1 COG:Cgl1899 KEGG:ns NR:ns ## COG: Cgl1899 COG0324 # Protein_GI_number: 19553149 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Corynebacterium glutamicum # 27 308 5 286 301 214 44.0 3e-55 MPFDTEQTSEKTDKTGDADPAMQRKVVSIVGPTASGKTGLGIAVAKALARKGEQAEIINA DAYQMYRGMDIGTAKASLEEQAQVRHHLIDIIEPDDAMSVARFQELAREKIAELQARGVR PILVGGSGLYARAAIDDISFPGTDPQVRKALEEREKTEGAGALFDELKAKDPEAAARMDP HNPRRTIRALEVIEVTGRPYSASLPHYRYVIPTVQIGLDLPREELDRRIDIRTKQMLEGG FIEEVERIRPKLGITAAKALGYQQVVDYLDGLRDLNDTFMDIAQKTKRLARKQMGWFGRD PRIHWLQALNPALLDNAMAIIEHADAGAYDVIDAQADAYTQHHLGDLA >gi|222441571|gb|ABXX02000002.1| GENE 46 49023 - 50477 504 484 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase [Haliangium ochraceum DSM 14365] # 30 470 1 452 461 198 30 3e-49 MNEDMMTEAERASKLAEPATEDTATRGKGVFYVHTLGCQMNVHDSERIAGVLEADGYVPA TEEQYLDHDVDLIVMNTCAVRENAAERMYGTIGLWAELKRQRPNLQIAVGGCMAQLDREK IAKKAPWVDAVFGTKNIGSLPQLLDQARIEGHAQVKVKEELNYFPSQLPTDRASKVSSWV AISVGCNNTCTFCIVPTTRGKEHDRRPGDILAEIRQCVDEGAKEVTLLGQNVNSFGYGIG DRFAFSKLLRACGEIEGLERVRFTSPHPAAFTDDVIAAMAETPNVMHQLHFPLQSGSDRI LRAMRRSYRSAKFLDILRKIREAMPDAQISTDIIVGFPGETEEDFQKTLRVVEEARFASA FTFIYSPRPGTPAAEMEQVPHDVVQDRFERLVALQERITEENLKTFEGRDVEVMVTGASG KKDAATHRVTGREKTGVLVHVGVPEGEPMPQVGDFVTATITHAGRHNLIADPDLKAGQTY AVRH >gi|222441571|gb|ABXX02000002.1| GENE 47 50529 - 51350 668 273 aa, chain + ## HITS:1 COG:SA2297 KEGG:ns NR:ns ## COG: SA2297 COG2357 # Protein_GI_number: 15928088 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 34 260 3 228 230 207 43.0 2e-53 MQRGMRWNWRDDGAFSAFSVFPRSFWVHYGTVILDRQSRINTSELQARLKSVTFDDGPLP SDQITEFIDQMQVYEGAMYEISTKLEILDSEFQVRFSHNPIHHMERRLKSINSILGKLRR KDLPLTVESVKDNLFDVAGIRVICNYRDDVYSVSNYLSAQNDIQVLRVKDYIKNPKQNGY RSLHVIYAVPVFLSSGPHYTPVEVQFRTIAMDYWASLEHALRYKTDLPDAKLSEHSQTLL DCARSLQNVEAQMQNIHRDINGAPQVGEAPKAG >gi|222441571|gb|ABXX02000002.1| GENE 48 51337 - 52308 858 323 aa, chain - ## HITS:1 COG:CAC0076 KEGG:ns NR:ns ## COG: CAC0076 COG0697 # Protein_GI_number: 15893372 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 4 308 12 291 303 171 35.0 2e-42 MACLVLAALIWGFAFVSQVQGMDSTTPLFFGATRFTLGSISLIPLLWFRRSTIAEQERKR RETQGKPSITLGNGAIVAMPKWAGNPIVVSIICGIVLFTASTVQQYGILYSGSAGRSGFI TALYIVMTPLLAFVILRRRVHLSVIISVAISVIGFYLLCVTDGFGSITLADMVLLFTAVL FAGHILVIDTFGRDMDPILLSFGQITTTAIISWIGSIIEGSIDWAGAAQSWIAIVYAGVC SAGVAYTLQVIGQQLVPPTRASVIMSLESFFSAVGGALLLGEIMTTRAYLGCALIFAGTI LAQLPIDQLLHAAKRKPADVSRP >gi|222441571|gb|ABXX02000002.1| GENE 49 52550 - 53383 1092 277 aa, chain - ## HITS:1 COG:CAC2831 KEGG:ns NR:ns ## COG: CAC2831 COG0670 # Protein_GI_number: 15896086 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Clostridium acetobutylicum # 56 276 11 230 231 119 37.0 9e-27 MAFGQQPQGNNAQNNGFNNQYQYNQQYNQYNAQPQYAYAPNGTAAVNVQATYSYEQAERS SVNSAYTHMTLGLIVTAVVAIITQMSGAYLALIQTTGIIGIFAPAVIEIVLAIYLGARIH TMKVSTAYVMFYVYAALMGFTLSTIFMAYDLGTIGISLALCAGFFFALTMFGRTTKINML KAGPILFVGLIVLIIAEVILMIFAPGNTTLMIVSAIGLLLFAGMTVYDAQATRAMLEQYS AQGPEMVKKVSILCALNLYLDFVNMFMYILQLLGNRD >gi|222441571|gb|ABXX02000002.1| GENE 50 53539 - 54381 1158 280 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1282 NR:ns ## KEGG: BBPR_1282 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 31 278 15 269 272 303 68.0 4e-81 MSEFNNAPIPNGGPAAPNGMRPAPIMPSPAPQGTTVCGIVGVVFGALGLVLSFIPIINNI AAIFGLVGAVLAIVAIVGTFRGKKRGKALSIVAAVLSVLAIVITLAMQSAASKALDDITG TSTSQSSSADADKDAKTDDSTKTDDSTKTDTKVKGEQDMEGDLTDMHVKIVSAVRSGNDY NNQPTVLVTYEWTNTTDKNNSFAMLANPKVFQNGQELDTAMYLDNPEGYDSGSYLSELQP GATGTVTLGYVLKDDSEITVDVTNLLDFSDTAKVTYKFAI >gi|222441571|gb|ABXX02000002.1| GENE 51 54556 - 55896 979 446 aa, chain + ## HITS:1 COG:no KEGG:BAD_1037 NR:ns ## KEGG: BAD_1037 # Name: not_defined # Def: atypical histidine kinase sensor of two-component system # Organism: B.adolescentis # Pathway: not_defined # 1 445 1 456 457 476 62.0 1e-133 MSVITNPSTAEVPVRTRIWCTVPMVVCASFACLAQVSFASQQYAQDSAPYLWMIACVLVA IPSGLILLARNSYPQAVFWTACLLVVALPYDSLIALMALTSLLARRQGTKVTLRSVLAAA TTTIWSQVRDALHPAEASIWHAIFSKPYTGVRYGNTMVMLVDERTIIASAVVVALIAVAI ATLAGLHIRSRALARVAEAKAQSANEQVSRLRTTLDNQQLADAIAAEAHDTLAHSLSLLA LNASALQAESRKLKAEAEQLGNANVAGMAGKIAGTTEDIRRQASGALDEAHSVIDMLRHP EDARLQLAANDAEASLTRDSLLQLIGDARAANMRIDTWIDVQQLGQLDESIGVIAYHVVQ EGLTNVRRHAPGAPVSLQVDANPPQGVHVHVSNPTMPQSPSHMADTRKGAGLPGLAKRIQ QAGGTCQYGFDQHNVFHLDVRLPWVG >gi|222441571|gb|ABXX02000002.1| GENE 52 55884 - 56585 559 233 aa, chain + ## HITS:1 COG:sll1708 KEGG:ns NR:ns ## COG: sll1708 COG2197 # Protein_GI_number: 16330324 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Synechocystis # 14 229 16 225 226 100 29.0 3e-21 MGWVSTERNHDEQPITVGVIDDDPMICQMMRLILEDYSSGRISVAFACTNAADAIEHASH NPPDVVLADIAMPGMDGIEATRQLRMLPDPPHVLILTSLSPNNTVERAIEAGAEGFVSKT DAPEDIIRRVADVCEGEPQFNPASQRQLIGDLHQHQPQSRRDEARAMLDALPEREREAVI LAAEGFTNAEISEKMFISERTVKAHISSAADKLCMGRVQMARLVERADLPPRL >gi|222441571|gb|ABXX02000002.1| GENE 53 56636 - 58747 1553 703 aa, chain + ## HITS:1 COG:HP1397 KEGG:ns NR:ns ## COG: HP1397 COG1479 # Protein_GI_number: 15646007 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori 26695 # 3 261 4 261 271 97 28.0 8e-20 MSISATEKPLGKIFTSDYRFVIPSFQRAYTWQTENIAQLVTDLQDACHDPDTPYFLGSLI LVHDGQTKYQVIDGQQRLISLSIIISVLRDLEDDPELVENLNDLIVEPGDKLRGIKAEPR LKLRERDTNFFRMYVQEGDLEGLFDLRDNDIESHAQRNIAINTRQVFDELAKMPTQDRRA FASYLVNEVTLVIVTTDDLAGAHRIFDVMNMRGVPLTASDVFKARTIAEISPAARNAYAS RWDDIMDPLGDDAQTLEEFFSDIHLIISHKAICTQLLEEFRKDVLKPFVKKQNVISFIDD LLAPYANAWRIIEHPTDANLPDDIIGQLVSLNDYQTTDWKPVAMWALVNSIRNLGNPDTR IFSTPGTHTAAASRTSNKNLEEPQLHDLERLHDVLAALERVTGVDSLNRQTPLNRRTRAA STIRDLDKNHTIQQIRGLLITDEDRRNALAHLRGDLQTSPAMKKLLLVRANEQRAGHRIA RPRSLNALPIMPEQVASDSSFASWSEATRDHWVNRIGNLALSQANDKQIAGLASYTDRRD RMLLSASSKRFPLTAELADIADCTPQTLQYRQDETIRLIADYWNIRYDAERNDLSTLSEE SLRVTDTSTSPTSKRVSIAQVLAAGLLIPGETLVWDRPRKGERWVATVTAEGKLRLDDGS EYSTPTAAARAVGGGSAGLTVWKRTSNGQKLSDVWKAYRLRKR >gi|222441571|gb|ABXX02000002.1| GENE 54 58792 - 59451 650 219 aa, chain - ## HITS:1 COG:CAC0240 KEGG:ns NR:ns ## COG: CAC0240 COG2197 # Protein_GI_number: 15893532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 216 1 205 208 140 36.0 2e-33 MRVAIVDDDPIVCSSLSTILKATGTADIAWTAYDGETAVGQYEEDNPDVLLIDVQMPVMD GLAASRKIIDAHPNAKILILTTFADESYIAEALEIGTKGYLIKQDVSSVIPAVQSVMAGQ VVMGAQVLRKLHVNKASQTQRHVSQAGDNGENRFSGRFANLTERERDVMQLVAEGYDNRE IAAKLFLSEGTVRNRISDILAKTNVTNRTKLAVEWLACQ >gi|222441571|gb|ABXX02000002.1| GENE 55 59451 - 60812 713 453 aa, chain - ## HITS:1 COG:DRA0009 KEGG:ns NR:ns ## COG: DRA0009 COG4585 # Protein_GI_number: 15807681 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 214 420 131 302 336 80 29.0 8e-15 MEEGMRRLLLQAIFLTFGLIANLYIVGDVSAELVCGALLAICCAAVGEYARSSAWTIAIL LMLDCGACFTPSWCAMMPVAAYNAAMLPAISQNVEQHRAGRNHAGLRSQLPNMPQYDAMQ ITTVIARWVWIIPVVATLVRCRNAGAHADDMGAALIAVLLALHVVLGFMVGLLCARNVTL TRQNRRLQDSKRDQIRRLRSQLAESEEDRAASVRVATLAERTRIAREIHDNVGHMLTRAI MQSEAAQVVAQVSGQEPAAQGFAQIHDTVGEAMTLVRGAVHDLKDEGTDFVAQIEASAHG LDDSSTVNVTLSNGIDAAPAAVSRCFATTIREALNNTIRHSMARNVDITLRDFPALWQLR IQDDGALWNDGSQGNINGMMGESSARFRQFHDAARTATMRDASGIGLADIEERARALGGT AVCGPYHEGWRVFVSIPKTDDDAAASATTKENV >gi|222441571|gb|ABXX02000002.1| GENE 56 61034 - 62032 360 332 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 13 328 8 310 312 143 34 1e-32 MSERMERQTGESSSSAVKVSKLVKRYGDMLALDYFDLDVHQGEIFGLLGPNGSGKTTAIN CILALLTFDEGTVRVFDEPIGPTSYALKRRIGIVPQNVAVFNELTVEENIDYFCSLYVPD RARRHALVEDALDFVGLRDYRRFRPSKLSGGLLRRLNIACGVAHKPDLIFFDEPTVAVDP QSRNAILEGIQRLNHEGATVIYTSHYMEEVEQICDRILIMDHGRHLALGTADELKAMIDT GERISVETDDLGGLHHEAGTQQALEQLRALPCVMSADYDGHELTVRCRRGDHNLLDVLTL LKSNGTNIGHLSSRQPTLNDVFLELTGTALRD >gi|222441571|gb|ABXX02000002.1| GENE 57 62062 - 63321 1123 419 aa, chain + ## HITS:1 COG:no KEGG:BAD_1043 NR:ns ## KEGG: BAD_1043 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 419 1 416 416 545 72.0 1e-153 MLQTLLVNLKLHFREKAQLFWLFAFPIILATMFNGMFGNIAESYALHTVDVVVVNNDDWR ASPGAQMLVDGISSDTGATGADGDHAKVDDDGDAMPKLITVTEAASMEAADRALLDAKAQ GRLSVDGSGKLQLAISQATQTSATDVMASSSGLDISLTVLGNIVDLYNRNTAVVVNAAQH NPSALLDDAFTGSIGSSSGFTKEVQLTNFKPSGTARYYYALLGMAAMMAMSFAVNAVSLA QANLSALGIRRSVAPLPKLQQLLAGFLSSWICSFLSLTVAMLYIRFGCQISLGGREWAGL GACLMASFATSAFGTLIGAIQGVSTSAKQGLCTALACTLSLFSGLYGSFAMDLSDQIAQH APLLSMLNPAQQITNLFYDILYYDSFRPFFATVGVLAAMSLVCLGMATVLLRRQRYEHL >gi|222441571|gb|ABXX02000002.1| GENE 58 63308 - 64594 994 428 aa, chain + ## HITS:1 COG:no KEGG:BAD_1044 NR:ns ## KEGG: BAD_1044 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 428 1 429 429 586 71.0 1e-166 MNTCKAALRILKARKLYVIIYLVLIGTMMFSISWQIMRGSTAAGATTYEPESARIAVIDR DDDAEHVAQSLRSYLALDGEMVTIDDDSISLQQAVASNYVDLIAIVPQGFAERYLQYADN ATATQPTIDTVVSYASGAGSLAQLKVNEFLSLTRTAYLGMPQAQRTLDAAMTTTLDAATA DMKQSHIAVVSSDSEDDGTTPGSSAFAGTLKTGLYPLLLVMPVCTFLVVSTFNDNEIRRR LYSSPARLVSLEAQQMLTCGTFGLLVCAAYTAVTFLLMALAGVSFTGLNAVNVGLSFVSL MVYTLMAIACGFLLGSSGFNEMATNGFVNVFALLVMFTSGMAFPVDMMPDPMIIIGKLLP GWWLCSSIDHVFGLGTASSSGVDYGAWASSTGLVAMFAVAFICLGLALGRIRRARPTLAS PATTQLAK >gi|222441571|gb|ABXX02000002.1| GENE 59 64647 - 65717 742 356 aa, chain - ## HITS:1 COG:BS_ydeC KEGG:ns NR:ns ## COG: BS_ydeC COG2207 # Protein_GI_number: 16077582 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 68 352 28 288 291 127 26.0 3e-29 MGYCMGQMGLDVRDVQVGQNEQTEQPELAQDGRLPYEFMPVTNWGRKPNGAEMVQYDAPM FFSFTEHSLLHQYPNMRAECHWHIDFEFTHIIRGHMWYFVNGESIRLEEGQGIFVNSRQL HYGFTEDGTDCEFSCTLLNPSCMCMPNMVYERFVAPLMADERLPYMVCDPEDEHGSALLE CMMRLHDAKFGQMPAAQTMHPATVDNMKLKDDTASLTVLSCFYTMVRELTAIAGEHGKNG SSKYDRKNPKIAILSKMIDYVQHNYVRQITLEEIASAGSVGRTKCAQIFHEMVDQTPIEF VNDVRMRAGAEMLDTTSMPVSDIAKKLGFSSSTFFTRTFKQYMHTTPTAYRRNMLK >gi|222441571|gb|ABXX02000002.1| GENE 60 65853 - 66500 738 215 aa, chain + ## HITS:1 COG:L1734467 KEGG:ns NR:ns ## COG: L1734467 COG0110 # Protein_GI_number: 15673662 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Lactococcus lactis # 12 200 5 193 203 199 52.0 3e-51 MVDPTNHPARDEWERMLSGELYVADSPQQQEANMRKRRLVQAINTSEYDAFKERDELFHE LFGAFGEGGFVEPPFNCDYGCNTFIGKNFYANMDCIFLDVARITIGDRVFFGPRVGLYTP YHPIDATVRSSGPEGARPITIGNDVWFGGNVVVGPGVTIGDDVVIGAGSVVVKDIPSHSV AVGNPCHVIREITDADCEYWEGKAAEYHAWKDSIQ >gi|222441571|gb|ABXX02000002.1| GENE 61 66528 - 67907 1206 459 aa, chain + ## HITS:1 COG:FN1789 KEGG:ns NR:ns ## COG: FN1789 COG0534 # Protein_GI_number: 19705094 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 10 452 16 459 459 243 34.0 5e-64 MQSSITWREFLRQTLTLALPIAFQQLMLALSSCADTLMLTNVGQNELSAVSLATQFQFIF SLCLAALTLGMSILVAQYWGAGNTNAVERVLAFIMLYAGGLSLVFFALTLLIPETLMSIM TNDATLITIGSQYLRVSSVSYLFIGLSQMYLCLMKNVGAAVTGMTVSTVGVIVHVALNAV LIYGWFGLPALGIFGAAISTVISRAIELVWSVLVASRNGRPRLRLSMMLHPDVALQKDFW KYSLPVLGNELVWGCGFTMYTVIMGHLGTDAVAANSIANIVKDLLVCLSLGLGNAGGILV GNLLGRNAFDQAKVMGDRLCVLVAAVGVGTGLLIIAARPLALQWAGLTPQATRYLSVMLF ICAYYAACGCMANLTIAGIFPAGGDSRFGLVCDASVMWLVVVPVGLLAAFVWKLPVLAVY ALLNTDECIKMIPALLHYRKYRWVNNVTRQTDSAVVSNA >gi|222441571|gb|ABXX02000002.1| GENE 62 67996 - 70698 3365 900 aa, chain - ## HITS:1 COG:ML1814 KEGG:ns NR:ns ## COG: ML1814 COG1048 # Protein_GI_number: 15827972 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Mycobacterium leprae # 9 900 15 942 944 1157 62.0 0 MSVRDDQLDTLKVDGKDYEYYRIADLPGIDHLPYSLKVLVENLVRNIDGVNITDDHVKAL LDWDPAAQPSHEIQFTPSRVVMQDFTGVPCIVDLATMRDAVKDLGGDPEVINPQVQSDMV IDHSVQIDKYGIADAVEQNMDIEYQRNGERYQFLRWGQQAFKNFRVVPPGTGIIHQVNIE YLAKVIMTKVEENGGKTLAYLDSCVGTDSHTTTVNGLGVLGWGVGGIEAEAAMLGQPISM LVPRVVGFKLTGSIPEGVTATDVVLTITDMLRQHGVVGKFVEFYGDGIASVPLANRATIG NMGPEFGSTCGIFPIDGVTLDYLRLTGRSEEQIALVEAYAKANKLWGDTTDPNYVEPQYS EYLELDLGTVVPSIAGPKRPQDRIKLSESKAKFVETLLAYETDKTVQEPVAVSTDFRGDF DITNGDVAIASITSCTNTSNPSVMIAAGLIARNAHAKGLKPKPWVKTSLAPGSQVVADYL KAAGLQDDLDALGYQLVGFGCATCIGNSGPLLPEISEAINANDLTVTSVLSGNRNFEGRI SPDVKMNYLASPPLVIAYALAGTMDFDFETQPLGEDPDGNDVYLKDIWPTNSEVAAVVDG TVSREMFLKDYASVFEGDRRWKGLDVPEGELFAWNEDSTYVRKQTFFDGMKATPDPVEDI HGARVLALLGDSVTTDHISPAGAFKASSPAGKYLTDRGVEPKNFNSYGSRRGNHEVMVRG TFGNIRLRNQLLASVGEEVTPGGFTYDFLDQKPTTIFEASRDYIEHDVPLVVLAGKEYGT GSSRDWAAKGTVMLGVKAVITESFERIHRSNLIGMGVLPLQFPAGESYESLGLDGTETYD IAGVEEFNNGIIPKTVHVTATHEDGSTTEFDAVVRIDTPGEADYYRNGGILQYVLRNLMK >gi|222441571|gb|ABXX02000002.1| GENE 63 70768 - 73236 2159 822 aa, chain - ## HITS:1 COG:Rv0908 KEGG:ns NR:ns ## COG: Rv0908 COG0474 # Protein_GI_number: 15608048 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Mycobacterium tuberculosis H37Rv # 8 797 10 773 797 468 40.0 1e-131 MPLIEETGLTQGEVIALRESGLDNVVKASTSRSLIDIVRANVFTLFNGIIFAAMVMVLIT GSWRDAVFGMIIIINTGIGICTELKAKRTLDKLSILVASDYLVHRDGKDVEIPHNDIVLG DFMWIRSGEQVPADAQIVHTWGLELDESMLTGESRTVRKGEGCDIFSGSTAISGMALVKV TAVGEHSYAAKLTARAKVYRKTVSDLNKGINTILKFMTFLVVPLCVLLIWSQVRTVGGWN VAISTGEWRSAVISAVAGVVGMIPEGLVLLTSLNFALAAIRLARKNTLVQELESVETLAR VDCLNLDKTGTVTDGTIRLDSLELLGVRGPDDMRGTVNEHDVRQALFDLSNEGQPNGTGQ AILSGLREQGFADGTVEARVPFSSARKWSSIYDGNAVWTMGAPEVILSQINGDHADILKQ VNDLANDGNRVLLVARIYGAAPDDYETDPKLNPASCPVALVCCSEHIRADAEETLAWFRE QGVRCRIISGDNPVTVGAIARKVHLTGEHEPRFMDARELPADITELAQVLENVDVLGRVL PDQKKAIVEALHAGEHVVAMTGDGVNDALAIKEADLGIAMGNAAPATKAVAQVVLVDSKF SHLPDVVARGRQVMANMERVASLFLVKTVYSALISLGVVLTQIPFPYLPRHITYVGGLTI GMPAFILALAPNTRRYIPGFLKRVLHFAVPCGVAVGLSILSTSWLLPIFMKWNVQDSGAQ LAMLRGVNAIILLMMGVFVLARVAKPLHSWRGILVLAFAAIGFGGMLVKPVANFFALVVP TGQMLAATAVAMVLSALVFLVCLRLVPKIPSIVPYFKKTRQS >gi|222441571|gb|ABXX02000002.1| GENE 64 73391 - 73939 543 182 aa, chain - ## HITS:1 COG:no KEGG:BAD_1054 NR:ns ## KEGG: BAD_1054 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 9 182 20 193 197 195 63.0 6e-49 MTAIALSCAALSGCVPSNAAVGDTQSPNTAVAHSMEDRDSLSIAMIGSDDVTADSMAMDA MEAGKLKPVYITVSGTVDAQSTAQQGVRDMAQRKADLIIIAGIDANEANAENWNDALETA RTAGVPVVLLNPIAVPKDNKLYAATMTVNDRMTDAIPLDDAAVAVANNDPHDREMLVTTI TH >gi|222441571|gb|ABXX02000002.1| GENE 65 73975 - 75240 1058 421 aa, chain - ## HITS:1 COG:CAC0523 KEGG:ns NR:ns ## COG: CAC0523 COG2265 # Protein_GI_number: 15893813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 5 418 15 457 460 149 26.0 1e-35 MESTIRIERYADQGRCVGHIDGRVVFVRFALPGELVRVALDEPHDREDRFWTGEVVEVLE ASEDRTDPIWSLAGPLAMGGGVGGADLVHVSLAGQLKWKVTSVAEQMARLGHVDVEVPIE RMSEDDAERGLHWRTRIEMIADADGRPSMHRRGTHVRVPIDTMPLASRTLLEVAEREHVW EGSFEPGSQIRLSVPEPRDNAPISDNYAVLVNGEVVAGSRELTEKVIVAGREFEYNVDAG GFWQMHRHAPIALTNHVIDLVRGELDGAKSACLWDLYSGSGLFTLPLATLTAERTRMLSV EGGKTAVRNAQRNLRHIHLGNVDARVGDVAKTLANVRNDLAKPDVVVLDPPRAGARAKVC RQIAEAEAKSVVYIACDPASLARDTATLVLLGYELADIRAFDIYPMTHHVETVALFRKHE Q >gi|222441571|gb|ABXX02000002.1| GENE 66 75240 - 75986 603 248 aa, chain - ## HITS:1 COG:no KEGG:BDP_1485 NR:ns ## KEGG: BDP_1485 # Name: not_defined # Def: Mn2+/Zn2+ ABC transport system permease # Organism: B.dentium # Pathway: not_defined # 4 232 2 230 242 395 88.0 1e-109 MAETEAKKRTGLGALADAGNTDDFSVIDAIGGPRGVIESMLPGVVFVALFVITSNLQLTI GVSAALAVLQVIVRLCQRQSVMGAVSGLLAVGICLIWAWNSHEARNYYMFGFLTNAFYVV LLTISLLVRVPGLGLVIEFIRTLPTEHFRAWLADWRGDKALNRAYTIITAMWVGVFALRL IVQVPLYLGNHVGWLGTARLLMGIPFWALAIWVSYLIVATPMHRHKMMQEVSEDDAEAAQ TTEMREEH >gi|222441571|gb|ABXX02000002.1| GENE 67 76013 - 76843 1175 276 aa, chain - ## HITS:1 COG:no KEGG:BDP_1486 NR:ns ## KEGG: BDP_1486 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 276 1 273 273 379 83.0 1e-104 MGLFGFGKKKHQSKEALEAAAGENEEAVDAAENVDEAQEVVALPEPSAEYEGRGDEHGPW DVEDENVPDYDEYLDMGSYYLPFLKGIELRVKANRATQQVLGTTITYGSSSVEIEAFAAP KTLGLWDDVRADLIEANKDAKEVEGVFGTELALPVTVKGGRKVLTRIVGVDGPRWMLRGI FSGKAATDPEGEEAKALNQFFADIVVERGDDPLAPRDLIPMHPPVAPAERKAAKAAAEEA EQKTEIPGKPKGPFDSDQQVEVKTTLSRGPMFSEVR >gi|222441571|gb|ABXX02000002.1| GENE 68 76961 - 77821 750 286 aa, chain - ## HITS:1 COG:RSc0140 KEGG:ns NR:ns ## COG: RSc0140 COG0708 # Protein_GI_number: 17544859 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Ralstonia solanacearum # 3 285 2 256 261 182 38.0 7e-46 MTITITTSNVNGIRAAKRKGIEEWAGRNTPDVWCMQEVRAPQNEIDPIFDEFGFEYSTAG RISDQSELHRMNEICRIKGRAGVGLLSALPVVDKRYGLPGLEDDVDSGRWIEADMQTPQG YVITVVCVYVHAGNTDDPEKMKQKYRFLDTMLIRMEQLRDEAAHGGKQAVLCGDFNIAHT PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDN NVGWRIDYQFATPELAETACGFVIDKAPTYDLRWSDHAPLSIMYDI >gi|222441571|gb|ABXX02000002.1| GENE 69 77902 - 79911 751 669 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 256 660 145 524 563 293 43 6e-78 MTEMNTENKLEAMQRANGPLLEVKNLQVDFTTDDGQPVHAVRNSSFSVYPGQWVAIVGES GSGKSTSAMAVLGLLPGTGHVVGGSIKLDGEEISGYKQRDFDKLRGNKMGLVPQDPMSNL NPVWRIGTQVKEALAANNMDIAHEKRSSLSKALADADVELKGNDDETFLGSKELPELLSA AKEALSKIGKTGDDFDKTVAYFESEWVPGSETRWRVADDLIKVGVAEDDAWYIAKKYVIG STMDDRIAGLLSEAGLPDAATRARQYPHEFSGGMRQRALIAIGLACRPELLIADEPTSAL DVTVQKKILDHLQMLTDSLGTAVLFITHDLGLAAERAQHIVVMYKGQVVESGPSLEVLQH PQHPYTKRLVAAAPSLASQRIISVKEHGGDASGVMEHKVNEDSLKSGESIITVDHLTREF KLPRKKEMFKAVDDVSFSVKKGTTLAIVGESGSGKSTVANMVLKLLEPTSGTVTYEGKDI SGFQGKELLDFRRHVQPVFQNPYGSLDPMYSIYRSIEEPLRIHGIGDKKSRAARVRELLD MVELPWSVRFRYPNELSGGQRQRIAIARAMALDPDVIVCDEAVSALDVLVQDQVLRLLND LQTEKGLSYLFITHDLAVVRQIADEVVVMQHGKLVEHATTDEVFDHPQKQYTRDLLGAIP GGKLQLGLD >gi|222441571|gb|ABXX02000002.1| GENE 70 79932 - 80897 1188 321 aa, chain - ## HITS:1 COG:Cgl1946 KEGG:ns NR:ns ## COG: Cgl1946 COG1173 # Protein_GI_number: 19553196 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 14 320 36 342 344 352 57.0 4e-97 MTDMNETNLSHTLPGQERYVAPLEETPLKDVDSVDESAPASSLWADAWRTLRKNPMFIIS AVLIVFIIFVALFPGVMTKQNPNYCTLENSLEPASKGHPFGFDLQGCDVYSRVVHGTRTS LSVGVFATVLVVLLGTLIGALSGFFGGWVDTILSRLTDIFLALPILLGAIVVLQMFKTND SIWKIILVMTLFGWTSVARIARGAVMEAKNLEFNTASTALGSTPWRNLFRHILPNSLAPI IVVGTTSLATYIVLEATLSFLGVGLPTTTVSWGGDISNAQSILRTDPMVLFYPSAALAIT VLAFIMMGDAVKDALDPKSRT >gi|222441571|gb|ABXX02000002.1| GENE 71 80915 - 81841 1171 308 aa, chain - ## HITS:1 COG:Cgl1945 KEGG:ns NR:ns ## COG: Cgl1945 COG0601 # Protein_GI_number: 19553195 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 1 308 1 308 308 352 61.0 6e-97 MGRYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYNLDK PFIVQYLLFLKNALTLDFGKTFSGQLVIDQIGRAFPVTIKLALMAFVFEAVFGVIFGAIS GLNKGKWCDTVILIISLLLISVPTFVTGFLAQYFLGVKLRLLPVTAGANPGFIDLLMPAM VLGSVSMAYIIRLSRSEISSNIALDYVRTARAKGMDNRSVMNRHVLRNSMIPVVTYLGQD LGALMGGAMISETIFNVHGIGYLTYQSILKGEGNLVVSIVTLLMLIFAVCNLLVDMLYAA LDPRIRYA >gi|222441571|gb|ABXX02000002.1| GENE 72 82141 - 83793 2640 550 aa, chain - ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 36 548 42 534 534 426 46.0 1e-119 MKKKALAFAAAACAFGMLLSGCGSSNGSDTAAEGANIITAYNSEPQHPLIPGNTNETGGG KPVDLLFSRLISFDAKGNASNEVAESITANDDATQYDIKLKDGWKFTDGTDVTAESFTKA WSYVANAKNGMVGSSFFSTIKGYDALQDTDNLKGDEQLEGLKIVNDHEFTVDLNKSDSVF AIKVGYSAFAPLPESFYDDTDAFGEAPVGNGPYKFQSWDHDNEIVLVKNPDYKGNRTPKN DGVTFKVYTKDDAAYADIQSGALDVMESVPASATKTFETDETVQAYNKAGSVIQQFTIPS SLKHFEAGTEEGTLRRQAISMAINRENICDKVLNGTGTPAVDFTSPLTPGYSDSLKGVGN LKYNEKKAKELWEKANAISPWTSDDKLTFAYNADGGHETTYTAVVNSINNTLGSEVAATN PYPTFNDYRTAVSDRKVQGAFRSGWQPDYPSAENYLVANYASAAADGNGSNDGDYKNSEF DDLCSKAAAAQTTDEANKLYQQAQEVLLNDLPAVPLYYANAYGVAATGVSGFEMNWQNLP VYENMTKSGK >gi|222441571|gb|ABXX02000002.1| GENE 73 84020 - 85648 2012 542 aa, chain - ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 31 542 42 534 534 446 48.0 1e-125 MFAVAAAACVLGMMLGGCGSSTSGNATEGSNVITAFDSEPQNGLIPGNTNETGGGRPIDL LFAGLVSFDKDGKAQNEVAESITANDDATQYDIKLKDGWKFTDGTDVTAESFTKAWSYTA NAKNAQLCSSFFSTIKGYDALQDTDNLKGDEQLEGLKIVNDHEFTVDLSQSDSAFATKLG YSGFYPMPESFYKDPKAFGESPVSDGPYKFDSWDHDKEIKLVKNPDYKGNRKVNNDGVTF KIYTDANAAYADVQAGNLDVMDTVPSADSKTFEFDSSVVPYNKVGSVIQTFTIPSDLEHW KTSTEEGQLRRQALSMAIDRQAICDKVLNGLGTPAVEFTSPKTPGYSDSLKGNENLKYNK KKAKELWEKANAISPWTSDDKLTFSYNADGGAKPIFEAVVNSVKNTLDIDVTTNPVPTFQ EFRNDVTGRKMTGAFRTGWQPDYPSPENYLYQLYSSDAADGNGSNDGDYKNSEFDDLCSK AAAAQTTDEANKLYQQAQEILLNDLPAIPLYYSNANGVAASGVKNFVMNWQNVPVYNEIL KS >gi|222441571|gb|ABXX02000002.1| GENE 74 85805 - 86731 753 308 aa, chain - ## HITS:1 COG:ML1600 KEGG:ns NR:ns ## COG: ML1600 COG0582 # Protein_GI_number: 15827839 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium leprae # 7 308 4 297 297 249 48.0 4e-66 MLFDKSVEAFDTYLKANRGLSENTRKAYRGDVEECLLALERLRCRDLNEVTIEDLRMWMA ESSKNHAKSSMARKTVAVRGFFAWTHEHGVTTTDPACALMTPKIPDTLPDVLSESQAEQL MERVDEDGETSQPKERTMKQQAIELRDAAMLELLYATGMRVAELVGLDVPDVVFSNRTVK VTGKGNKQRVMPFGAPAQKAIRRWLDDGRPLLVGEQSAAALFLGRQGKRIDQRMVRRVVH ECARDAGVPDISPHALRHSAATHMLDGGADLREVQELLGHSSLKTTQRYTHVSIEQLKAR YGQAFPRA >gi|222441571|gb|ABXX02000002.1| GENE 75 86910 - 87167 223 85 aa, chain + ## HITS:1 COG:no KEGG:BDP_1497 NR:ns ## KEGG: BDP_1497 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 84 1 84 85 125 83.0 4e-28 MPIPNEIPAGARIVVRTCEGVDPKDQRMKFRDYVGHVRSWDGQTLEMTRDAAANGSRPEQ RVSIPADTIVTVKPVPERSMTRPRP >gi|222441571|gb|ABXX02000002.1| GENE 76 87172 - 88212 741 346 aa, chain - ## HITS:1 COG:ML2472 KEGG:ns NR:ns ## COG: ML2472 COG0287 # Protein_GI_number: 15828337 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Mycobacterium leprae # 2 241 11 247 327 134 36.0 2e-31 MVKQRIAIVGLGLIGGSLARRLVNAGCEVIAWNHNDRPYETAKADGIRCVSTLAALADTK PDVLVLCNPLKAMPQILGALKPLIDTDITTLTDVGSVKAMVREQVKAVGLEHCYVGAHPM AGNELSGWESSDPTLYDGALWAITVDENTEYQRFRAVATMIVDHCSNRLIVLDDATHDRC AALISHMPHVISTAMINELVANPNRNIAAALAAGSWRDMTRVALTDPNRTRAMVEEDAAN VEALLRNMANRLTLMANVLHGMTTQQGSPTAGDDKEMARFFIQGQPFREYKVLAKEPDFE ERCETVELAIPETGWQQMLLESARRGEHIVRFDGYRQAMAQVRSAV >gi|222441571|gb|ABXX02000002.1| GENE 77 88206 - 89186 755 326 aa, chain - ## HITS:1 COG:Cj0316_2 KEGG:ns NR:ns ## COG: Cj0316_2 COG0077 # Protein_GI_number: 15791684 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Campylobacter jejuni # 8 272 7 258 273 96 28.0 6e-20 MSARKLFYLGPQGTFTHQAAVNASQALAHLEPEGFELVAADDVPQILDAAQRGEGWGVVA WENNVEGYVVPNLDALIDAKDLVGFARVGVDVTFDAYVRAGSNPEDATVATAHAHGLAQC KRFIAEHHLEPTPAPSNAAACRDIKANEIAFGPSICGELYNVTRIGTAVQDYQGAQTDFL VLAPRKEAGKLLEQPRSQADMEYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRP IKGRTGTYSFIATLDAAPWEQRFHGALVEIAEHGDWAKTLAVYPRRERPNPPVTSWMLPQ GGVRLDEQHLPDDWQNSETVGKELMW >gi|222441571|gb|ABXX02000002.1| GENE 78 89254 - 89817 531 187 aa, chain - ## HITS:1 COG:no KEGG:BAD_1068 NR:ns ## KEGG: BAD_1068 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 187 3 186 186 234 63.0 1e-60 MQQMKQSHDTYGSNQDAAPDAQLMPWSYRLPIWGRFLVDLVSGIIVGVVGTMAHRMGASM NIPYGLAIAYLMVIISTWSARSRDGVSGLALHLIGSSLVVWTVMSGYGPGGDAMIPVGFG GDDPMPFFSEQAGYMWLYGVVLIPVVMLVLPKRWFVTPPRKETRDGAFAADTQTNEGKTS DNAQPVE >gi|222441571|gb|ABXX02000002.1| GENE 79 90024 - 91955 2826 643 aa, chain - ## HITS:1 COG:MT1202 KEGG:ns NR:ns ## COG: MT1202 COG1217 # Protein_GI_number: 15840608 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Mycobacterium tuberculosis CDC1551 # 8 621 4 612 628 709 61.0 0 MAVRGDIRNVAIVAHVDHGKTTLVNAMLAQSHVFNEREEVPDRVMDSNDLEREKGITILA KNTAVQYTGPLAAKYGHPEGITLNIIDTPGHADFGGEVERGISMVDGVVLLVDASEGPLP QTRFVLRKALEAKLPVILCVNKTDRPDARIEEVVGESSDLLLGLAQDVIEEGIDLDEDAL FDLPVIYCAAKAGYASENQPENGGLPDNEDLEPLFEAIIKNIPAPEYEEGAPLQAHVANI DSSDFLGRLGLVRIYNGTLEKGKTYGLSRVDGSVENFRVSELLRTQGLERTPVDSAGPGD IVAVAGVNDIMIGETIVDPSDPRPLPLIHVDDPAISMTFGINDSPLAGTEGKDHKLTARM IKDRLDRELIGNVSIKVLPTERPDAWEVQGRGELALAVLAEQMRREGYELTVGRPQVVTK TIDGVINEPMENTTIDVPEEYMGTVTQLLADRKGRMENMTNHGTGWVRLQFTVPSRGLIG FRTALLSATRGTGIASSISAGYAPWAGQIVTRQNGSMVCDRKGIATPYAMQRLQARGNFF VEPQSPVYEGQVVGVNNKPDELDVNITLAKHMTNMRSSTADVLETLTPPIKMSLEESLDF ANEDECVEVTPESIRVRKIILSREDWYKWRAKQRRQNNAQNNK >gi|222441571|gb|ABXX02000002.1| GENE 80 92173 - 93531 1510 452 aa, chain - ## HITS:1 COG:Cgl2919 KEGG:ns NR:ns ## COG: Cgl2919 COG0477 # Protein_GI_number: 19554169 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 14 452 2 439 439 383 53.0 1e-106 MTSVQSASVASSGSLTRNERLDRLPFNKAHRKLLVASGIGWAFDAMDVGLVSFVVAAIAA DPHFNLTPTEKSWVLSIGFVGMAIGAALGGFVADRVGRKTVFSATLVIFGLANGGMALSW SLTALLIARLIIGLGLGAELPVASTLVSEFSPTKQRGRMTVLLESFWAVGWIVAAFIGYF VIPNTGDWGWRWALLIGALPLLYAIVTRVHIPESVRFLESKGREDEAEQAVRYFEQAGGI EPVASPKGKPLPKINTRELFGKKCIARTAAIWATWFFVNFSYYGAFTWMPSLLADQFGSL TKSFGYTLAIAVAQLPGYFLAAWLVEIWGRRKTLSVFLAVSAVAAFAFSQAGSVAAVLGF GMLLSASNLGAWGVLYAVTPEIYPTRLRAAASGAAAACGRVAAIIAPLLMPWFLTLSGGN KAVAFIVFAVAFILACVAALCLPERTGKELED >gi|222441571|gb|ABXX02000002.1| GENE 81 93622 - 94419 439 265 aa, chain - ## HITS:1 COG:Cgl1046 KEGG:ns NR:ns ## COG: Cgl1046 COG1051 # Protein_GI_number: 19552296 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Corynebacterium glutamicum # 16 230 1 204 206 183 48.0 3e-46 MIMGNVSERRKQPPQVGVSVVILALGPASHGTQEHARTSAGSTLWIPLVRRVRQPFLGQW ALPGGGLRADHSLEQSAYVALESTTSLHPRYLEQLYTFGDPARSHGGLPMVSIVYWALVD DLNGQLGQSIDDNVKWFPVDDLPELAFDHGDIVDYALSRLRGKIEYPQIVTRLVGERFTL SQLHDVYEAVAGQSIDLANFRRKMLASGQLEDTGDKLRVGRNRPATVYRYTMDVLRQSTW SDARDRHDFDVRETQDDVLSALTTI >gi|222441571|gb|ABXX02000002.1| GENE 82 94586 - 95425 1042 279 aa, chain - ## HITS:1 COG:Cgl1387 KEGG:ns NR:ns ## COG: Cgl1387 COG1192 # Protein_GI_number: 19552637 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 5 275 16 287 290 299 55.0 4e-81 MPTDLLGRDYETFPAPEPLQTHGPARIIAMCNQKGGVGKTTSSINIAGALSQYGRRVLIV DFDPQGAATVGLGINANTVEDTVYTALFNPRMDVHDVIRHTDFENLDIMPANIDLSAAEV QLVTEVGREQVLAGVLRQVKDEYDVIIVDCQPSLGLLTVNALTAADGVIIPVAAEFFALR GVALLMQSIEKVQSRINPSLEVYGVLVTMFTHTLHCDEVLQRIYEAFQGKVFHSVISRSI KLPDSTVAAAPITIYAPNHKTAKEYREVARELIAQGIVA >gi|222441571|gb|ABXX02000002.1| GENE 83 95513 - 96466 515 317 aa, chain - ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 9 316 8 304 304 253 48.0 4e-67 MDDFERTIRQFLAHIDVERGLSKATVSAYGADLKKYRQWLADQGVGGIAAVTTQDVERYI VFLDESGESSRSKARRLASIHALHRFAVNEHIVVDDVSAQVKAPKGVSTLPDVLTVDEVA RLLDSIPVSQNREHDGVVSEFPDDPVMLRDKALLEFMYAIGARVSEACGANLDDVDVDGR IARLMGKGSKQRLVPVGSYACEAIIRYLHAGRPKLESKSKGPVERRALFLNKRGKRLSRQ SVWEIIRGAGERAHIDKPLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTTQIYTHI SPENLIETYLMSHPRAR >gi|222441571|gb|ABXX02000002.1| GENE 84 96619 - 97002 630 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026092|ref|YP_909937.1| 50S ribosomal protein L20 [Bifidobacterium adolescentis ATCC 15703] # 1 127 1 127 127 247 98 7e-64 MARVKRAVNAHKKRRVVLERASGYRGQRSRLYRKAKEQLLHSFTYNFRDRKARKGDFRKL WIQRINAAVRAEGITYNRFIQGLHLAGIELDRRALAELAISDPETFKAIVEQAKAALPAD VNAPKEA >gi|222441571|gb|ABXX02000002.1| GENE 85 97053 - 97247 313 64 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224282678|ref|ZP_03646000.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171] # 1 64 1 64 64 125 98 4e-27 MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRALKADGVLATSQSKNMKK LLGR >gi|222441571|gb|ABXX02000002.1| GENE 86 97266 - 97964 941 232 aa, chain - ## HITS:1 COG:Rv1641 KEGG:ns NR:ns ## COG: Rv1641 COG0290 # Protein_GI_number: 15608779 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 3 (IF-3) # Organism: Mycobacterium tuberculosis H37Rv # 7 184 1 179 201 188 59.0 9e-48 MRIGVIISDEPRINDEIRVSQVRLIGPNGEQVGVIATSVALNLAKEANLDLVEVAPNAKP PVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKIDDHDFEVKKGHVVRFLNGGD KVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAPKQEGRNIIMTLAPKGKKVHT QSEQRRRGDQSRAERQARQAARLAAKQEAQAQAAAEAKAAVTSDKPKTSETK >gi|222441571|gb|ABXX02000002.1| GENE 87 98279 - 99034 472 251 aa, chain + ## HITS:1 COG:AGc4926 KEGG:ns NR:ns ## COG: AGc4926 COG1564 # Protein_GI_number: 15889969 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 209 98 279 289 61 31.0 1e-09 MTNNSNTCVIFAAGEYYGETPMVPADSFVIAADGGLDHARALDVTPDVVVGDFDSITGKR PTPDERTVELPPEKDDPDLLSALKIGWFHGARLFHIYGALGGRIDHTISNIQLMALLANH GAIGFLHGNDSIVTAICDGDLDFAANDVKPGRMISVFSHSDTSIGVCEKGLKYKLSDVLM TSTKVNGVSNEFRHGLPAHVGVTQGTLIVTFPAEAPLPQVSWHHAFKGDLGPLDTQISSA LVECGLKPHAA >gi|222441571|gb|ABXX02000002.1| GENE 88 99182 - 100237 1538 351 aa, chain + ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 4 349 3 333 333 379 57.0 1e-105 MTVKIGINGFGRIGRLAFRRIFELQARGGQAGDIEVAAINDLTTPSMLAYLLKYDSTHGT FRHDDGTPVEVTSTEDSIVVDGKEYKVYAEKDANNIPWVKNDGVEFVLECTGFYTSAEKS QAHINAGAKKVLISAPAKDETTPTVVFGVNHNILKASDVIVSAGSCTTNSMAAMVKLLDE NWGIKAGFMTTIHAYTGTQMILDGPRFPKARNNRAAAINTIPHSTGAAKAIGKVVPSVNG KLQGHAQRIQVPDGSVTELTTVLNKEVTADEINAAFKAAFSSTEFYGYNEDGIVSSDIIG DTHGGVFDPTQTDVNTVDGVTMARTVSWYDNEYGFTCNMVRTLLYFAEISE >gi|222441571|gb|ABXX02000002.1| GENE 89 100368 - 100874 440 168 aa, chain + ## HITS:1 COG:YPO3088 KEGG:ns NR:ns ## COG: YPO3088 COG2606 # Protein_GI_number: 16123265 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 13 168 2 158 159 129 45.0 3e-30 MGKKKHEKGAGSTPATVQLEQAGIPFKTYEYAHSNDHMDDGYGVEAATKLGFDEHQVFKT LMADTGSERVVGVVPVSGHMDLKALAAAVGAKKASMADPKVAMRESGYVVGGISPLGQRT HHKTVLDESALQYSEILLSGGKRGFSIGINPNDLLKVLDGVAAPIGTR >gi|222441571|gb|ABXX02000002.1| GENE 90 100900 - 101913 374 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 4 330 2 297 676 148 29 3e-34 MTKRIVLADPRGFCAGVDRAILTVQTILKAANPPRTDDLPPVYVRRQIVHNKHVVEELSA QGAVFVQELAEIPDSAASAGIPIVFSAHGVSPAVKAEAAARGMHVVDATCPLVSKVHREV LRFVKEGYEIIYIGHKGHDEAVGVVGESPEHVHLIEHESDVDSLDFSSDTKLVLLSQTTL SVDETAGTIAALKERFPWLEMPPNSDICYATSNRQAAVKLVAEQSDCVVIVGSANSSNSV RLTEVAQEGLNTRFGGVLDGACGKAHRVDDASELDPTWFEGVESVGISSGASVPDELVSG VIESLQSQGFNDVTTIETIKENMHFVLPSELRKKPVR >gi|222441571|gb|ABXX02000002.1| GENE 91 102076 - 103026 1046 316 aa, chain + ## HITS:1 COG:ECs4802 KEGG:ns NR:ns ## COG: ECs4802 COG2017 # Protein_GI_number: 15834056 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli O157:H7 # 10 305 9 288 300 142 31.0 8e-34 MTCINLPARTGQQFSISHGDYEAVITELGATMRKLTYKGEDLTVALGPDDLVTCCHGQIL IPFPNRIEGGEYTFEGKTYSLPIDEHDRNTAIHGYGYRSFWKLISLAEDAVTLAWRSPNM VGYPFDLYVTATYSLADDGMHLTVSAYNNGNANAPWALAIHPWLANSLNGYGDEIDEHNA KCSLTLPARTHVTVDENLIPTGTEPVDGTKYDLREDTLLTEQPFDDAWTDLEHAEDGSVT AVFTRADGKKVRVGGDETITSFQVCTGTKFPASQHPAGVAVEPQTAYANAFNTGNELIVI KPGETTSTSLFLGMAE >gi|222441571|gb|ABXX02000002.1| GENE 92 103201 - 103275 159 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGMRGRKRKDRRKKAANHGKRPNA >gi|222441571|gb|ABXX02000002.1| GENE 93 103408 - 103653 320 81 aa, chain - ## HITS:1 COG:no KEGG:BAD_1083 NR:ns ## KEGG: BAD_1083 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 81 1 83 83 97 72.0 1e-19 MSESIERHTTTVTTSEDGTVTRVTHTSVRVSASGDCFDPERCCDERERALIAAMRAYLRP QHAPQSLIDRLEATLDHCCGE >gi|222441571|gb|ABXX02000002.1| GENE 94 103650 - 104297 617 215 aa, chain - ## HITS:1 COG:MT3320 KEGG:ns NR:ns ## COG: MT3320 COG1595 # Protein_GI_number: 15842811 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 21 208 88 273 284 140 43.0 1e-33 MCMACGSLGGYNKAVTEVRTETTVGKRARFEKLAMPVVDALYRQAMKLTNNPDDAQDLVQ DTFERGFKAFDSFQEGTNFAAWMTTIERNAYFNQYAKAKRRPQRANDSTGEYDDWDIYSA SGHSSEELKSAEQEYLDAYAPEEIMAALAKLSPERRQVFIDAAIDGKSYQQVADEQGVKI GTVMSRLNRARTQLKRELANYAKERGYATAGKDSA >gi|222441571|gb|ABXX02000002.1| GENE 95 104351 - 104638 213 95 aa, chain + ## HITS:1 COG:no KEGG:BAD_1085 NR:ns ## KEGG: BAD_1085 # Name: murE # Def: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (EC:6.3.2.13) # Organism: B.adolescentis # Pathway: Lysine biosynthesis [PATH:bad00300]; Peptidoglycan biosynthesis [PATH:bad00550] # 1 94 1 94 517 153 76.0 2e-36 MALTLASAARLLSEHGLLREIIQGDAWTLDAQTINGFDKPFGSITYDTRQVVSGALLCCK GRFKAEYLDGIDDRGLAAYVAENDFSAATKAPGLS >gi|222441571|gb|ABXX02000002.1| GENE 96 104656 - 105903 873 415 aa, chain + ## HITS:1 COG:L53929 KEGG:ns NR:ns ## COG: L53929 COG0769 # Protein_GI_number: 15673788 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Lactococcus lactis # 1 404 94 475 483 245 38.0 1e-64 MSLLSAAFYGYPQNQLKIIGITGTKGKTTTAYLTQAMLNGCSCGKCALFSSADNCLDGHT YVESDLTTPESMDAFRMMREAADNGMKYLVMEVSSQAYKVDRVFGLTFDVAAFLNISPDH ISPIEHPTFEDYFHCKRQIVKNCRSLVLGTACAHADLIRQDAAIADIPVTTFALGEASAA DVTAWPESADHSRFAIAVEGEQIGSLSLQLDGDFNYANAAAAIAIAHAVGFDFHETAAKE ALRNMEPVRIAGRMEHFHDTKSNTIAIVDYAHNYASVTALLDYVYQRYGKDDPEVTLVTG SAGNKAYDRRSEIVRAAQNRVNHLILTFEDTDDEPVEHVCQDMLDSVTNPDLDARIILDR TEAVESTVAIDRKNPNRLHIILIIGKGNERWFKDHGKHIPFEGDDHIVERIFGLA >gi|222441571|gb|ABXX02000002.1| GENE 97 105965 - 106963 1002 332 aa, chain + ## HITS:1 COG:no KEGG:Balac_1169 NR:ns ## KEGG: Balac_1169 # Name: not_defined # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 1 331 1 331 349 464 65.0 1e-129 MITLEFTDAATMEQQAVQAGLTLPIEQTAVWAKYQNTIDGRTPWGAYVVKQDGAPIAFIA LIDYETHGYHYLRSVHGPAWLNKPSAQLEAQVRDLLVEDVRKRDKNVVFLRIDLWDFEGS FPVLSTVPYNETVHVDITGGDEAVLTRMKKRGRRDVRKALRESPAACADETAQAMADFSE YYEVMVDTAHRDGFSPAPMSDYVDMISNLGPDHARVFAARIDGKVVAWSIITINGDHAVY YYACMRTEIMRQHVPDKLIYVVCCALGERGCTVLDLMGIGNDFAPSLKSLNGFKTKFSEN IVQVSAGRDIPVKKAFYRSLTLLQSLRRKLRK >gi|222441571|gb|ABXX02000002.1| GENE 98 107119 - 108738 1801 539 aa, chain - ## HITS:1 COG:ML1471 KEGG:ns NR:ns ## COG: ML1471 COG0285 # Protein_GI_number: 15827773 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Mycobacterium leprae # 34 456 48 480 485 291 41.0 2e-78 MSFEHPNRNNESMIDVERDIMSRPSERNTTNLDLQRMKMILDIMGHPEQSFRVIHITGTN GKGSTARMTEAICRAYGMRTGLYTSPHLEHVNERIAIDGQQLSDDDFVDTWDQIKDLVAM VDMKMGELDKPKMSFFEVLTAMAIWKFADAPVDVAIVEVGMGGRWDATNVLDADAAIIGP IDMDHMAWLGNTVEQIASEKVGIIKPGCTAVIGRQPHEEAVMPIIEEAAAENHANLVRDG IEAEVVTRIPAVGGQVVTLRTPNGTYAEVPVAKFGEHQAHNALAALCAAEVVIPVNGALD GDLVAEALSTVRIPGRIEQIRTSPTIILDGGHNVNAAESLRAAIEENYDFQQLVGVIAMM GDKQVEEYLGVLEPLLSHVIVTENSWRDRVMPAEDLKTVAERVFGAERVTCVPELPDAIQ EAVNMVDADDELGVGYGHGVLICGSFTTAGDARLMLEEKVNPDLKKPKSERVFQAAVEPE PRKDQDEADLDFESDANPDFDINDFGSVGPDLAEDEDTDGSEDAANTEHADDASSEDVQ >gi|222441571|gb|ABXX02000002.1| GENE 99 108885 - 110486 1697 533 aa, chain + ## HITS:1 COG:PA5224 KEGG:ns NR:ns ## COG: PA5224 COG0006 # Protein_GI_number: 15600417 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Pseudomonas aeruginosa # 61 531 4 444 444 191 31.0 3e-48 MNEVITDKDKEYEAMEQASAPGPDQAMSDRVNNRSLRPRSEAFKEFMTTGWDDNEPAIEP LESSHYIQARLDTLGKAFPGERIVIPAGQPKVRNNDCDYAFRPDTTFSYYTGLGEDYEAG AVLVLNPVDPDSPEAAAGKTHVPELFVAPRANHYTQDFFMNAHYGEYWVGPRAGLQEMTA MTGIETNDIAQLSDALSKDVGSEAGAVRVRVIREADPQITEMVEDIREANGFADPDGNTD ADDKLHEFAAEARMCKDEYEIREMRKAVAATKHGFDNILRKLPSSLDKPRSERMLEGAFN AISREEGNEVGYDTIIASGAHAPILHWMRNTGTVESGDLLLIDAGVEVNSLYTADITRTF PTNGKFTDFQKKLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAERLHEWGILPVDVE ESLSPEGQQHRRWLACGVAHHLGLDVHDCAQARYESYQGAAIRPGMIFTIEPGLYFREDD LLIPPEYRGIGIRVEDDVLMTEDGPEWISAGIPKQIDEVEEWMASMAAEGAKV >gi|222441571|gb|ABXX02000002.1| GENE 100 110488 - 111009 545 173 aa, chain + ## HITS:1 COG:Cgl2168 KEGG:ns NR:ns ## COG: Cgl2168 COG0494 # Protein_GI_number: 19553418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 136 1 143 178 102 44.0 3e-22 MPTPEFILELRKKVGHDLLWLMGVSGYVEDEQGRVLLGKRSDTGEWAMVYGINEPGEEPA DTVAREVKEETGVDVIVTDLVSVKSSHRVLTYANGDNTMYMDHLFICRPDPNGNTEPFVG DEESLNVGWFSPDDLPQPLADTTVERMGYVREYIKNKANGDAHAQFSFNGTIR >gi|222441571|gb|ABXX02000002.1| GENE 101 111112 - 112821 765 569 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 8 551 8 528 563 299 34 1e-79 MSDEQTNLAQVKDLSVSFMTDAGSIKAIDKISFTIPRKTVVGVVGESGSGKSVTARSIIK LLPETATTSGAIYLSNREGNEQLDVLSLSGEDLRRMRGSEAAMVFQEPNSVLNPVYTIGW QIEEGLRAHGMKDKKELRAKSVDILKKVGIPDAETRIDYYPHQFSGGQKQRIVIAMALVL NPGLILADEPTTALDVTVQAEILDLLRLARDEFGASVLIITHNMGVIADIADEVVVMYRG HVVEQGSVEQIFYSPKDDYTKRLLAAVPRIGQKLVVRDEQGKVIERSKDWHDQPIAVEAK GLTITYPGHLTQPDFKAVNGIDFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLN VLGVEMNGVKERQFKPKRADIGFVFQDPGSSFNPLMTIAENVAEPLIVHKKYSSVSEASD YVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARALALKPSLLIADEPTSALDVSVQAK VLELFKKLQAEIGFACLFITHDLAVVDMLADCIMVMHKGEIVEHGDADQVMNNPQNPYTQ KLLASLPVPDPREQREHCAQLHELLAKGI >gi|222441571|gb|ABXX02000002.1| GENE 102 112826 - 113998 1283 390 aa, chain - ## HITS:1 COG:TM1153 KEGG:ns NR:ns ## COG: TM1153 COG1173 # Protein_GI_number: 15643910 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Thermotoga maritima # 32 325 23 299 301 207 39.0 4e-53 MTASANNVTVPGDTRLNDLKVNRKAPFWAKIPIIKELRVAVGWQKGMLITGLLLTAFFLL VALFAPVIAPYGYAQLKDANGVSFPAQAAPSSEHIWGTTAGGYDVFSRVIWGSRTAVIAI VIAVLLSIFAGVLLGLVSGYFGGWVDRVLVMIADAIYSFPSLLLAILMAIMISGGQSGLW SGILASGISITVVYIPQYFRTIRSEVIRIKESAYVDSARVVGASTWRIMTKHLLKNSTRT LPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGIAI VLIVLGITLVGESLNDLADPRLRARKSAGEVVGSIEDTSVDPSQKPGVRNEVIAELAAAK NPMGASDQPVTVTDRDPSFTASEWGSKEEE >gi|222441571|gb|ABXX02000002.1| GENE 103 114000 - 115091 269 363 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 90 359 43 310 320 108 27 5e-22 MSDTAAPAVSQEAKPKQAKKNHLSGGFFRFVLTRFLLIIPTVFILVTVVFFVMRATGDPI SAALGGRLTPDELQKRVHAAGYDRPLIVQYIDYLGGLLHGDLGTTLTDNQPVISILVHYG SATFELALLSLIVALIVGIGLGRVAACRRDHAADAGIRTFAILCYATPVFFLGLVLKLIF AIWLNVLPASGRCSLSSEMQFTRLVSPTGFYIIDALQLGDMSVLADVLRHAVLPALALGL LTAGVFIRLVRTNVISTYNSGYVEAARSRGVAEKRLLSKHAWRPALIPIITVMGMQIALM LAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAIIVAVVNFIVDVIAALVDPR VRY >gi|222441571|gb|ABXX02000002.1| GENE 104 115261 - 116892 2535 543 aa, chain - ## HITS:1 COG:PAE2391 KEGG:ns NR:ns ## COG: PAE2391 COG0747 # Protein_GI_number: 18313310 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pyrobaculum aerophilum # 38 540 50 527 530 277 34.0 4e-74 MNHKKIMAAAVSIAALASLAACGGVKDSGSASGDADVITVGTTDKVTSVDPAGSYDNGSY AVQINVFPFLYAQDYNTSELSPDIAADDGTWSDDGTEFTVKIKSGLKFANGHDLTSSDVK FSFDRVNTINDENGPSSLLANIESIDTPDDTTVVFHSKVKNDVTLKQVLSSPAGPIVDEE VFSADKLTDADTIIKEKAFAGPYILTSYKANEVAGYSKNDSYQGLTPAKNSTVQVKYFAD SSNLKMAVQQGQVDVAYRSLTPTDIDDLSKDSKVKVVKGPGGEERFLVFNFNIQPYGTKS DEPNADKAKAVRQAVANLIDREELATKVYKDTYTPMYSYIPDGLVGHEDTFKTAYGDGNG KPSADKAKKVLEDAGVSTPVELKLQYNPDHYGSSSADEYAALKAQLEEGGLFKVDLQSTE WTQYNKDRVVTEDSDGSYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNAYSNSEINDLIM EQAGETDESAREDLLKKIQTLETEDLSTIPLLQGAQVAVTGANVKGVVLDASFRFRFASV TKA >gi|222441571|gb|ABXX02000002.1| GENE 105 117223 - 118425 360 400 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 86 385 7 313 323 143 30 1e-32 MSSYSAQQSSISENNRSRILQYLYHNGISSRAQIAKAIELTPAAITKITAKLLFRDVIEE TGDMEGDKNRRSIGLNLNCAKYHVVGVKFARSLVQIAVFDLKCNRISLTDLPTVDEEHIP ETVEQIRATVRQLIADDSSIVAVGMAVPGPYLVEEGRTALVSSMQGWRQVNFIKEFSEAF NVPVFVEQDARAGALAQFLFNPELSEGSLAYYLLGEGIGLGIIDNGSIYYGAHGTATEIG HISVDVNGKPCDCGNVGCLERYCSANAIHERLNEQPSIVPGCETMTHAQACTALFAKVSA GDKAATELTSEVARYIGYGAVNIINAFNPTHIVLGDIISQAGQPLLDEVKKVVRERTIPE VGNDTEITLSSLPTDATVTGAAAVAITSFLEHPSMFFDVA >gi|222441571|gb|ABXX02000002.1| GENE 106 118453 - 119352 1385 299 aa, chain + ## HITS:1 COG:MA1840 KEGG:ns NR:ns ## COG: MA1840 COG0524 # Protein_GI_number: 20090690 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Methanosarcina acetivorans str.C2A # 3 288 24 317 326 167 37.0 2e-41 MSKPIVISLGEILWDMLPTGKRAGGAPVNFAYHASQNGAESFAISAVGNDELGNELLADA HKAGINTLVQVNEYPTGTVDVALTNGIPEYTIVENVAWDHIKLTDELVEAVSKADAVCFG TLGLRSPESHDTIVELLKHTKESALKFFDINLRANFYSNELIEELLDYANIFKINDEELI MMRDMFSIPKCNDEEACKWFIDRFNLEYIILTGGATFSTITAKNGEVSTLLTPHVEVADT VGAGDSFSGSFTGKLLTGAPLKEAHRAAVNTAAYVCTKEGGWPTYPAEGVPDYLAEAGK >gi|222441571|gb|ABXX02000002.1| GENE 107 119388 - 119828 109 146 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVIMASFFILIFNPQFAQSRLPRHTHLNEEDALNEPYTTMNAVSQSDIPQSSSDFMQRI TDLYGLFRYSGQAVSPCLDFARSVRKAAYNLRLLTFRDILKSPVLHRVLDNSRLGMIGFD GDLFVAGKRAENVGSTRGCPLQKNKC >gi|222441571|gb|ABXX02000002.1| GENE 108 120426 - 121682 1616 418 aa, chain + ## HITS:1 COG:yihS KEGG:ns NR:ns ## COG: yihS COG2942 # Protein_GI_number: 16131720 # Func_class: G Carbohydrate transport and metabolism # Function: N-acyl-D-glucosamine 2-epimerase # Organism: Escherichia coli K12 # 12 414 9 410 418 318 40.0 1e-86 MTCTYPPEAYVFSSEENHSLLNAETNELLHFGHNFPAPQGGSYWLDDTGNPDLTQSIHTW ITCRMAHVYSLGFLYGEPGAAELVDKAIAGLRGPLHDDENGGWYPSISADGSTHEAGKVC YAHAFVILAATSAKLIGRPGADELLEEALATYDKHFWDDEIGLAVDTWNTEFTELDSYRG INANMHTTEAFLAVADVTDNEEYRERAGRIIDHVVGWASNNSWRIPEHFTADWQPDLECN HDKPDDQFKPYGATPGHGIEWARLITQYALSSKQRSEKGKQQLIEAAENLFAQALSDAWN AEGTIGLAYTTDWNGKPVVTERMHWTLAESVNTSATLATVTGKQVYKDWYATFWKYIDEY LIDHENGSWFHQLNKDNEVIGTVWPGKSDLYHATQCTLIPRLDPAVSVAPALKANPNA >gi|222441571|gb|ABXX02000002.1| GENE 109 121837 - 122931 191 364 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 [marine actinobacterium PHSC20C1] # 119 364 25 264 266 78 25 5e-13 MARRVVSSGTGSDGSETTSEKHALRGRSIQSRKHFDSPAQSQPNGRSIAGGVGRSSSSVS HAQAEAKMAHGGKNKASRSRSGDFVDARNLAGEDFVAKTLEETTGTLGVVTRPKVVDFKA RLKERRKANARVVAMRAFVSAAVAAVVVALIWLFFFSSVFRLEAGNISVVGANEWVSESQ VLDIAGQQAGKSILLVSNNDVEKKIKEIPGVTTAQSKKQLPNSLEVTIKAQKPAAMLKTG EDSMTAVDSKGRILNSVSGASVDGIPVIEVKDVETSLSNRSIKEALKILSSLPESMRNSI TKVTAETQDSITTEINGGDRVIVWGDSSDLKLKKAVVDKIINDPNVIGDKHNVDVSAPLR PIIK >gi|222441571|gb|ABXX02000002.1| GENE 110 122931 - 124496 1503 521 aa, chain - ## HITS:1 COG:CAC3225 KEGG:ns NR:ns ## COG: CAC3225 COG0773 # Protein_GI_number: 15896472 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Clostridium acetobutylicum # 33 509 14 456 458 248 34.0 3e-65 MTDNQREAGTIILDPTHVSFSQQEGVNDLGVTHFIGIGGAGMSVLAEMLHEQGVEVDGSD REPSAKTDRLQGLGIAVEFGQREENVEGKQTIVFSSAIKPDNPEIVAAHAAGERIVHRSD ILSLLMNTKRAVTVAGAHGKTTTSSMLAHILTHAGEGNLADPSYAIGGSIQGKDGVILDG GHAGQGDVLVAEADESDGSFAKYHPEIAIVTNSEADHLDHYGTQENYRAAFVNHVQHAIK SVVMCGDDEGNLAVLRALDASAAAHTVVYATQDAASLGDLNGAAFVHIESESESAQSGAE HFTLHVPAGLLGEQERMVPVTLAVPGIHNARNASAAIIAAALLGVDIEKAAEAATSFLGA ARRFQVRGTVSQVTVVDDYAHHPTEISALLDAARRKYPQSAIRVIFQPHLFSRTKFFAEA FAEALAKADDVIVTGIFPAREKQEDYPTVGPATIVDEALKLDHTPAEDWIRGVEDMHTAA QMMVMRAHHGDVIFTVGAGDITQMDEVILHALQAHRWDCEG >gi|222441571|gb|ABXX02000002.1| GENE 111 124629 - 125804 1098 391 aa, chain - ## HITS:1 COG:ML0914 KEGG:ns NR:ns ## COG: ML0914 COG0707 # Protein_GI_number: 15827434 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Mycobacterium leprae # 7 387 31 390 407 240 43.0 4e-63 MSNQKHIVLAGGGTAGHVNPLLAVAHVIRELEPDADIAVVGTAVGLEHELVPQAGFELET IEKVPFPRRPNMAALKFPAQWKAETAKVRDILTRHEAQVVVGFGGYTSAPVYAAAHKMGI PIAMHEQNARAGMANKLGARWASMIGTAYAQTGLKPRKGVEAERVGLPLRAEIAAIAEGM EHDRAATRQTAAAQLGVDPNRPLVVVTGGSLGAVNVNRAVAASAKELLEHAQVIHLTGKG KDDEVRSLVSVSAGEQVLGELGPEHANDGDYRVAPYLERIDLAFACADLIICRSGAGTVS ELTALGLPAIYVPLPIGNGEQRFNAQPVVDAEGGLMVADADFTAEWVKRHVPNLLADSDA LARYGDNAWKYGIRDAAEVMAKRVLSMIDER >gi|222441571|gb|ABXX02000002.1| GENE 112 125935 - 127170 1068 411 aa, chain - ## HITS:1 COG:Cgl2109 KEGG:ns NR:ns ## COG: Cgl2109 COG0772 # Protein_GI_number: 19553359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Corynebacterium glutamicum # 50 403 50 406 550 201 36.0 3e-51 MEKPKTKQSDGTRQKRQAAAEERVDDFRGYVGLRSMLNPIWCFHGFRVSVVILTIFGVIM VFSSSSVYMIANDQSPWSQAIKQGAFCVLGLIVGVACMMVPAELIRRVSFAFLLVALFLQ SLTFTPLGVDAQGNKGWIGLFGFTFQPAEVVKLALCVWLPRELISAQKRVSKVGPVNAYR RLITWLGLALLLVMGGKDLGTAMILFAIAGTALLLGNFPGKWLAIVACGGLALVGGLVIS SPNRLNRVMATYQTCSAADMEGVCYQVVHGKYAMASGGLLGVGIGNSGEKWGYLPEAHND FIFAIIGEETGFVGASLVILLFLVLGWCMLVVAIQAHDRYITLVLANITVWIVGQAFVNI GVVVGLFPVMGVPLPFVSAGGSSLILCLGAAGVTISMMKQQPQIQAEIQRV >gi|222441571|gb|ABXX02000002.1| GENE 113 127157 - 128590 1305 477 aa, chain - ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 8 465 15 458 472 205 35.0 2e-52 MDMSGKTVIVAGLGVSGQSMMEVLGSRAEKVLGVDEKKPDADLHSFDRIDWDHVDLVMTS PVFNPRTPFILEAQRRGIPVMSEVELAWQLRVNCDSTGELAQWIGITGTNGKTSTTEMTS EMLTACDLTAPAVGNIGKAVSHAVVDPANDVLCVELSSFQLHFTDSLALDCAAITNIADD HLDWHGGIENYAADKAKVFHRVKKALVYNADDERVTRLAFAAETAEGCRKVGFTLSEPQD GQIGVKDGWIVDMSGIAGGELGMPEQVAKVSEFTHLTEPDGTVYPHLLADALTALALVLG LGADKEKAIASLEQFTPGGHRIQTVATATTPDGGSIRFVDDSKATNAHAAKASLNSFADK SVVWIAGGLAKGSRFEQLVAEQSHTIKAAVVIGKDQQPILDAFAASAPDIPLTIIDPANN DVIMERAVDAAGEYAQSGDVVLMAPACASMDQFKSYADRGNQFAQQAQRWVNEHGEA >gi|222441571|gb|ABXX02000002.1| GENE 114 128692 - 129789 1163 365 aa, chain - ## HITS:1 COG:ML0911 KEGG:ns NR:ns ## COG: ML0911 COG0472 # Protein_GI_number: 15827431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 15 364 15 358 359 285 45.0 1e-76 MISLIIGIVVSLVVTIVGTPLLIRLVHKLNYGQYIRQDGPKSHLVKRGTPTLGGVVINLA VVLGWGSSALYRFITRGEVPSWSALLVLFAMLSMGMLGFIDDFAKVRKKQSEGLTVKGKF IGQFVLATIYAVLALILPTNSGFPSAQAGMSFIEEPFFSFEFAGKAVAIVLFVIWVNFLM TAWTNAINLTDGLDGLAAGSSMIAFMGYAVITFWEFYHLKGLGHEGFAYAVSDPLDLTII AACAAMACFGFLWYNSNPASIFMGDTGSLALGGLFAAMSIATHTEFLAIILGGLFVIETM SDVIQVGYFKMTRKRVFKMAPIHHHFELKGWPEVKVVIRFWMIELLFVLIALVIFYGDWV SRSGL >gi|222441571|gb|ABXX02000002.1| GENE 115 129863 - 131353 1234 496 aa, chain - ## HITS:1 COG:Rv2157c KEGG:ns NR:ns ## COG: Rv2157c COG0770 # Protein_GI_number: 15609294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Mycobacterium tuberculosis H37Rv # 6 488 1 497 510 245 38.0 2e-64 MSSPTMMPMSLEEIAQAVQGRLIAGTAAIDTPVATSTFTDSRQIVEGSVFVAIAGERVDG HDYVSKVGAQGAVAAIVDHEIDGAGVPQIVVEDTVLALGALAKHNIERRRALETPFTVIG ITGSVGKTTTKDLMKALLAHIGPTIAPVGSFNNEIGLPLTSLKVHAETRFLVAEMGANHV GEIANLTSLVPPDIAVVLKVGVAHLGEFGSPERIAQAKSEIIRGLVPGGLSVLNANDEHV AAMSAIAPGDVMWFGLPQNNDGKPAISAQHVHCDELDHPSFILDNGDGEHAEVTLGICGQ HNVMNALAAASVAMRLGMSIGDVASALSDVTAISPHRMAVSIVNKQETSFTLIDDSFNAN PDSMKAGLDGLLRWKAGSESQPFRVAVLGAMLELGPDEKDLHVGIGRYALEGGVDALLTV GSASDASLDALAGAMADGASSAGDASHVDWVHDIDEADSLVTRLAVEHPGAVVLLKGSHA SGLSALAERWQALAAQ >gi|222441571|gb|ABXX02000002.1| GENE 116 131444 - 132322 861 292 aa, chain - ## HITS:1 COG:no KEGG:BAD_1106 NR:ns ## KEGG: BAD_1106 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 8 292 1 285 285 406 79.0 1e-112 MSAVSESMNRRMTLGLLASRYGFDLDPAFATEVTVTSIADDIDSVRPGALFMPSMQVDEQ QLRQVQALGAYGAVVPHALRGKTDGVQIPLIYAEPTAQQLGKLASEMAGSPSDSLAVFAV AGSNTQTVEQGVRDLADFLHMLGNPVGVISAGNSQSLERFLDLNYPLSILDVQRTMAVCA EDGAAAVILALSEETLNDDALQSVNVDVLGCDDKGLSEAEIVKSVARFGCTVGKQTHIAG RTQESDALAAQATEAYGQTDSSALSLSIAMVLAAGVRKANIKSALRVSRDLN >gi|222441571|gb|ABXX02000002.1| GENE 117 132356 - 134101 1477 581 aa, chain - ## HITS:1 COG:ML0908 KEGG:ns NR:ns ## COG: ML0908 COG0768 # Protein_GI_number: 15827428 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 5 570 90 663 675 266 34.0 6e-71 MAIGVILALMGTACLIQLANIQLINGKTMAQAAAQNRTITVTLKARRGKIMDTNGSILAQ SVERYTIIGNPEEAQAFTPTTCTKQTGDNCHQIDGKPVGATGAAAVARLLAPVLDMDATE LGAMLSGTGQYAVLKKDVTPAVKRKISKLNLGGIVYAELSNERIYSNGTLMGALLGGVDG EGKGVAGIEQMENKTLTGEDGYQVYQQGNNGVEIPGTMTESKDAVNGSDVTLTIDHDVQW YVEKVLKESCTKYSSPWGVAVVQDTQTGDILALADSDEIEAGSDQAKMTVSRAVSETFEP GSIGKVFTMSGMIQLGLHQASDKFTVPDHITTNGQTYSDATTHGDEHWTLAGILEQSSNV GMIIAAEKMSNEQRYEFISKFGIGQDNGLGLPGEADGLLYSADQWDLRTQNTVLFGQAYT TNALQLTNAVAVIANKGVKKPQRIIKAISDAEGHSEEQKPEGEATRVIDEQVASQVMNAM ESVSDHYSQFVKVDGYRVAAKSGTAEVAGADGRLSSIISDYSAIIPADNPRFVVTVVLKD PQGGYGGLTAGPVTAEIGEFLMQKYEVPASSPRTDAIPVTW >gi|222441571|gb|ABXX02000002.1| GENE 118 134155 - 134610 451 151 aa, chain - ## HITS:1 COG:no KEGG:BAD_1108 NR:ns ## KEGG: BAD_1108 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 151 1 153 153 238 83.0 7e-62 MAAPRTIASNAAPAGRRDQTETAGTTRPELHVVKGTRAEGNSVKRGFEHLITWTRTRSTP LLHLVIAVVFLGGCLLGSLTLRTQMVQHSFEANQIESNITRLTQDVEDDQAKLDELEASL PSKAEEMGMVPQKGALTIDLNGYQPSGDDAQ >gi|222441571|gb|ABXX02000002.1| GENE 119 134613 - 135644 460 343 aa, chain - ## HITS:1 COG:Cgl2116 KEGG:ns NR:ns ## COG: Cgl2116 COG0275 # Protein_GI_number: 19553366 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Corynebacterium glutamicum # 8 314 12 327 337 255 46.0 1e-67 MTDVTTIHQPVLLRDCVDLVVPALARPGSIAVDCTLGLAGHSTAFLKASPQARLIGIDRD TEALSLATQRMRMEGLADRFIPVHAAFDDFAQVLDDQGIDQVNAVFMDLGLSSLQIDETE RGFSYSHDAPLDMRMDVTQPLTAEQILAEYSFADLVRIFRTYGEERFSKQIAREIVRRRE IEPLTTSGQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLAGTLPQIANHLAV GGRLVVESYHSLEDKTVKTFMNQGLKADVPADMPVIPPDMMPFFKELTRGAIKAAEEEIA MNPRSASVRLRAVELTRPIPERWRKRFDQGNDYASMKRQGRRG >gi|222441571|gb|ABXX02000002.1| GENE 120 135644 - 136159 489 171 aa, chain - ## HITS:1 COG:BH2576 KEGG:ns NR:ns ## COG: BH2576 COG2001 # Protein_GI_number: 15615139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 28 166 1 139 143 138 43.0 4e-33 MVQSVETEPFSDDGSTQASGVMAGLPPLLLGTYTPKIDAKGRMALPAKFRSQLGPGMVMA RGQERCVYLLPQSEFRRIALQIQRTSMGNKAARDYLRVFLSGAVDQEPDRQGRVLVPQML RDYANLGSDIVVIGVGTRAEIWNKQAWEEYLAEQEQGYSDIADDVLPAVEF >gi|222441571|gb|ABXX02000002.1| GENE 121 136424 - 138703 1920 759 aa, chain + ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 2 748 15 753 755 340 33.0 6e-93 MSSYSAQLREEQQAVSRAYGRLDDLRAQARARLDTVRAAGSHGSPTQRTERDSFATMYED RLTQLRAVEDRLVFGRLDDVHGTHRYIGRIGLSDEHHEPILTDWRADAARPFYEATPSHH GDIVMRRHITLSFREVVGVEDEVLDVHSDQVGQASSDGTLTGEGALLASLNAKRTGKMTD IVATIQAEQDRIIRADLNQAVVVQGGPGTGKTAVALHRAAYLLYTHRRMLERSGVLVVGP SSTFLHYIDQVLPSLGETGVVSRTIADLIPGVIATAHDNPFAAKLKGERRMSKAIANAVA ARERVPASLPSIRINGFAVPIVRADIEQAITDAKRTRQQHNKARETFVHSMLIAMRNRYV DKLDYEPEQAELTDVMQQLRMNDTLRKTLNLAWLPMTGEWLIDQLFCKPQQLRRFAPWLE ERDIEALVRPKGSPFTVSDIPLLDEAMELLGPDPKAVARQKALDAKRAEEEQFAQDTLAQ AGIGSGIVTSQMLVDNINGMDAELTAQRAAADREWTYGHIVVDEAQELTAMDWRMLIRRC PSRSFTIVGDVAQTSALGGTRSWRRMMDPLFGPHNWQLNELTINYRNPKEVSQLACDFAA TEGLYISTVNAVRGVPDSVKRLTLADDSLIADAVAQQTVDLVRAFVSSDGTGRVAIIAPD DMVKPLRRRVYEQLRETLTAKEFDRLDAQSSWDEQVTVCSTQMVKGLEYDAVMVVQPGSI EENAPSRIVAAADLYVAMTRPTQRLLIVRTNADEKLLKL >gi|222441571|gb|ABXX02000002.1| GENE 122 138714 - 139913 1323 399 aa, chain + ## HITS:1 COG:HI0465 KEGG:ns NR:ns ## COG: HI0465 COG0111 # Protein_GI_number: 16272413 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Haemophilus influenzae # 3 398 13 409 410 400 51.0 1e-111 MPKALLLENIHPDAAQSLRDHGFEVECLRGALNEDELIDALEDVDLLGIRSKTSVTSKVI DARPTLTAVGCFCIGTNQVDLDYAGKHGIAVFNAPYSNTRSVVELVIGDIICLMRRIPAH THHMKHGMWDKSASGSHEVRGKTLGIIGYGNIGSQLSVIAEALGMRVVFYDIEEKLAMGN AHRCSTLNELLEQSDVVTLHVDGRKSNTGFFGEDQFAHMKQDSIFINLSRGFVADLDALK KHLDSGHISGAAVDVFPVEPKKSGDEFLTSLADEDNMILTPHIGGSTLEAQKSIGQFVSQ RLEDYWFRGSTMLSVNLPQITLSDIRSNFRIAHLHANLPGVLAKVNRVLGEENINIAAQA LGTEGEIGYVVTDVAQRPSQKALDELAAIEGTIRMRVIS >gi|222441571|gb|ABXX02000002.1| GENE 123 140099 - 140575 375 158 aa, chain - ## HITS:1 COG:MT2791 KEGG:ns NR:ns ## COG: MT2791 COG1327 # Protein_GI_number: 15842256 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Mycobacterium tuberculosis CDC1551 # 9 154 1 146 154 179 58.0 2e-45 MVQAILDTMHCPFCQNPDTKVVDTRISDDGHSIRRRRECPKCSKRFTTLETTMLLVVKRS GNVEQFDRNKVISGVRKACQGRPIKEDDLKALGQQVEEDLRARGLAQVKSDEVGRAILKP LRDLDEVAYMRFASVYQNFENLEDFQNAIDELKADALK >gi|222441571|gb|ABXX02000002.1| GENE 124 140601 - 140918 298 105 aa, chain - ## HITS:1 COG:no KEGG:BAD_1114 NR:ns ## KEGG: BAD_1114 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 16 104 12 100 101 122 69.0 3e-27 MDRVPKAHGVDFKVWADRLAVIMMLMVLAWCLAGLMMPARAQSDPGATPVVVYTVQPGDT LWGYAARITPDGGNVADTVDELVRLNNLDSVSLRAGQRLIVPDEV >gi|222441571|gb|ABXX02000002.1| GENE 125 141068 - 141784 791 238 aa, chain + ## HITS:1 COG:MT2793 KEGG:ns NR:ns ## COG: MT2793 COG1974 # Protein_GI_number: 15842258 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium tuberculosis CDC1551 # 17 238 5 217 217 219 51.0 3e-57 MSTVPFTPKKDAERPDESTLTDRQRKVLGAIKKHLVEQGFAPSFREIGEAAGLKSPSSVK HQLQVLDDKGFIRMNANKGRAIEVVSFDDDEVSPGKVAQVIPFPSQSDSSGSIMASRDVP LVGRIAAGVPITAEQHVDDVMRLPERLTGTGNLFMLEVHGDSMIDAAICDGDFVVVREQN TAENGDIVAALLDDEATVKTFRKDHGHVWLIPHNPAYSPIDGTHAEIMGKVVTVLRKI >gi|222441571|gb|ABXX02000002.1| GENE 126 141901 - 142773 573 290 aa, chain - ## HITS:1 COG:XF0866 KEGG:ns NR:ns ## COG: XF0866 COG1230 # Protein_GI_number: 15837468 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Xylella fastidiosa 9a5c # 3 278 42 309 321 161 42.0 2e-39 MMSLGLTSTVFIAEVISAVITESLALLVDAGHMLTDMSVLIASTVTAILMQRKPSNKRTW GWARLEVLTAAVGALILLIVGIYALVEAGMRLFGGSADEVNDVRLLLFMGILGLAANIGS IFILASQSEDNMNMKAAFLEVMNDALGSVAVIVSASVLICTGWAGFDAVAGGIIALMMIP RAIKLLRNAVRVLLEETPNGLDLDEVRSHLEQVPHVVAVHDIHASIVSTGMPIFMAHVVV EQGLTMKEAAEILAQLQDCLREHFPVSVPHTTFQLEPEGYSSTSKSEMHS >gi|222441571|gb|ABXX02000002.1| GENE 127 143151 - 144113 1214 320 aa, chain - ## HITS:1 COG:CAC0267 KEGG:ns NR:ns ## COG: CAC0267 COG0039 # Protein_GI_number: 15893559 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 7 314 3 308 313 272 43.0 6e-73 MVDSPIKPTKLAIIGAGAVGSTLAFAAAQRGVAREIVLEDIAKERVEAEVLDMQHGSSFF PTVSIAGSDDPEICRDADMIVITAGPRQKPGQSRLELVGATINILKAIIPGLVKVAPNAI YMLITNPVDIATHVAQKISGLPANQVFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGE HGDSEVPLWASATIGGVPMCDWTPLPGHAPLDAEVREQIHQDVKNAAYKIINGKGATNYA IGMSGVDIIEAVMRDSNRILPVSSMLHDFHGISDVCMSVPTLLNRSGVNTAINTPVSDRE LAALTRSAETLKETAAQFGF >gi|222441571|gb|ABXX02000002.1| GENE 128 144314 - 145774 607 486 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 112 468 56 410 425 238 40 3e-61 MSANDVSGVLADQSEVLLDTNGENHFNESHDEQWQERESRNALKHVSGLGEMQDVTEVEY RKVRLERVVLVGVWSSRETTQAQAEESLRELAALAETAGAVVCDGLLQHRIKPDAATYVG SGKARELAGIVAQEEADTIVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSRE GKAQVELAQLQYMLPRLRGWGGSLSRQAGGRAAGDAGIGSRGPGETKIEMDRRVIRSRIA KLRKQIEQMAPARDVKRGARRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELVENALFATL DTAVRRARAKDGRQYAYVDTVGFVRRLPTQLIEAFKSTLEEVSEADLIVHVVDGSHPDPF SQIDAVDDVLSDIDGVETIPTIIVFNKADRMDEATRERIEALMPEAYIVSAFSGEGVDEL RMQVESMLPTPNVHVEALLPYTAGSLVSRVREYGKVINVEYRDDGMMLEAEVDDHLAAQI VEQSIG >gi|222441571|gb|ABXX02000002.1| GENE 129 145852 - 146001 61 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQPLTYILRLRISREILFGLCHTHSLQTLASGITQAALIHVANARYPCL >gi|222441571|gb|ABXX02000002.1| GENE 130 145936 - 146547 584 203 aa, chain + ## HITS:1 COG:BS_ybxB KEGG:ns NR:ns ## COG: BS_ybxB COG2813 # Protein_GI_number: 16077174 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Bacillus subtilis # 4 202 2 200 201 128 37.0 8e-30 MAQAEQYFAADPQSKDVRKRLHVVLRGNEADVEVSNGVFSGNRVDLGTSVLLRQAPEPPE EGTFLDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGVRNVHAVTADEI PSDMTFDLIWSNPPIRVGKDVLHELLMTWLPRLNAGGTAYLVVQKNLGSDSLIPWLATQL GDGYEVSKYASSKGFRVIEVMKA >gi|222441571|gb|ABXX02000002.1| GENE 131 146544 - 150644 3434 1366 aa, chain + ## HITS:1 COG:ECs2015 KEGG:ns NR:ns ## COG: ECs2015 COG1643 # Protein_GI_number: 15831269 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 5 1365 54 1276 1281 852 39.0 0 MKFEYPSQLPVSAARSDIAEAVKSSQVVIVSGQTGSGKTTQLPKILLELGRGSHGRQIVH TQPRRLAARTVAERIAAEMGVRLGDEVGYQVRFTDESSPKTRLRVVTDGILLAQIQRDPK LMQYDTIVIDEAHERSLNIDFLLGYLTALLPKRRDLKLVITSATIDSVKFQEHFEHALHT KVPVIEVSGRTYPVQVVYEPLGTAPALMRSVPGFETGAMPGDADYETLSAAPDAKDSREP NVDMPTAVARACAELVIHSSHDRGPRDILVFASGERDIHDFENALRHHYGPRAIDMRRPD AIEIVPLFARLSSKEQHRVFEPHDHQRIVIATNVAETSLTVPGIRYVVDPGTARISRYSK SAKVQRLPIEPISQASANQRSGRCGRIADGIAIRLYSREDFETRPEFTEPEILRTSLGAV VLHMLSVGVARTAQDVTDFGFIDPPDMKAVSDGFNELTELKAVARKHGEVVLTHTGRMLA RIPIDVRLGRMIIEAAKSTTPNTLAAVLVVVAFLSLQDPRERPDENREEADRIHNRYADP SSDFLTALNLWDRVFQADGEPSNSALRRICKTEYLSWLRIRQWKDLVTQLREMCKEFKFK VGDPIPASRPPLEIRQLPSNQQAAHSLCCSWDAQGIHTSMLSGLLSMMGMQIVREPKASD FAGLKGAARARAMKRAQKMAKNDYQGARGTHFALFPASAVAKSTPQWVMSTELVETSRLW ARYSAQIDPAWAEPLAGSLTRTTYADPHWSGSRGSAVASAKVLLYGLPIVQDRTVQWGRI NPLEARDFLIRQGLVEGDIQQRFSYDDFIAKNRDVLEDAADDASRTRQMAQAVSDEDLFD FYNSVIPNTVTSVADLAKWWKSKHDEQPDLLDFDPEKVERLADAESVSLADYPDHWHTLG TDGSPIDLRLSYVYDPHDPNDGVTVHVPLKVLSRLTPEQFTWNVPGLLDELIVGMIKSLP KTLRVQFVPAPDTARKIRAWIDERYPDLPGSGNQQKPNLAPTNAEGVAAWPDLPHTFTQA AISIVGAQIHPEVLTGELWSKLMPYLRVTFSVEQQLPPSRKSQHGRRHARGPVKVLGSGK SLVELQRKFAEQAEASARQMVKKQAENAGNQGKLVEQANLLHKAGATTEARSTMLWRGAL DVLRMPSERISSRWLGAEALMLASAPYQSTKDLTEDLQLAAVKRLLPNVDELPDDEALAN AVLDVREVFEDTVYAVAHDVIAILKRYAEVDKAVSGKADLPMLSVLQSIREHIATLVYPG FIGKTPPDALAPIERYLHADVLRLGKAKNDKNRDVRWAWEADEAKQLADKAMAKAEREPA GPRHEALMKQAVTARWMLEEFYVSLWAQELGTPKPISLQRIKKALS >gi|222441571|gb|ABXX02000002.1| GENE 132 150754 - 151830 733 358 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0695 NR:ns ## KEGG: BBPR_0695 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 358 1 360 360 399 60.0 1e-109 MRLRSVLSEALRNIGAGVSHALLMFAAVLFASTLLGGYEAANVVGLETEAVQRINAYADV GAIVGGTVDGAACDRLADAGGGVMGTLAGAMRAGQQIVPLATPGKDISSYEVTPGMIRMI AGSAKSDVSGVWVSTDVAKDFGLTKGSVMQTEQGTMSVAGVFYWPNDGRDTRFAYALLVP VSASNGTFDECWVRQWPQSGQTEDVLFSTLVASGSSSNAGVTQVNKSFDSHYDAQASYGQ RMTRWMPWLGLAVGLMFGAFGVRRRRLEYAGALHSGQSKGAQLLEIAVETLIWSGLACAS SAALLGAYCVRMSIADSMTVWLGAMRAPCAIFAGVMVSSVLVGMTIHETQLFRFFKQR >gi|222441571|gb|ABXX02000002.1| GENE 133 151837 - 152925 711 362 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0724 NR:ns ## KEGG: BBIF_0724 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 20 361 29 365 366 310 54.0 9e-83 MTRRFGMRQRTGGKRSKCTAVTWTLLAAVTAACIAVGSCALWLPDRTPTLLSSAVEKTVA PASVQEYTGMQQVTVVPTISSDRDLSGNASGMVTADWSGDGLISGKGAYQVNDRTVVALN TATPLYRDLKTGDIGGDVLALNNELSLLGYNSVPGSDTYGWATSDGWKQLMADNGNTSDG SLSLADTLWIPEHEVAVAEWNATAGSMVTGGTAIGKIPGSLTKLTIKNGTASAQERSLTI FGITGTLPANTTEITDAGFLQQVEANDSYQSVDVESRKAGFDATLALSERMRVLRVPAGA VFGINGSTGCIVPASNNHGSTPVKVSIVGGELGVSLVQADSEDIASISNVEIGSGLNNLT CE >gi|222441571|gb|ABXX02000002.1| GENE 134 153009 - 153719 510 236 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0288 NR:ns ## KEGG: BBIF_0288 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 3 222 16 236 242 114 35.0 4e-24 MVTSWMSFCKTCVLAVALSMLLAGCSINGDATGASSDSATSESSSENGSAGGQKLAASLS EWIEQRESQGNIAESQKTILDKAKSTGEISTSDYEKAWSDYRQCMIDKGYKEIKLIKYPS GLYAEAGHKQGTTIQESRYSDDSTECGDEYVADVQDVYGIIVGNPNLYADQAQAVVDCLH RDSLVPKDYTVSRFNKEFSGTDGNTSFDMQNLQVRSCLVSNGYNVGYATDDTEQLW >gi|222441571|gb|ABXX02000002.1| GENE 135 153913 - 154563 205 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 198 2 214 245 83 29 1e-14 MRVAVEGLAHRFEGTDLLFENLSFVAEPGVTIAICGPSGCGKSTLLSILAGWEQPYAGTV TREGVDRVGWMFQNPYGVAERTALDHVVFPLLAKGMSRREAEPKALEAMELFDLEYAADR RFCALSGGEAQRLMLARAVCSRPNMLLVDEPTAQLDTRTSHSVSHVLGNLAGQGMIVLVA THDPDTRDACDRVIDLADYAPQVGGSTAQPANIAVH >gi|222441571|gb|ABXX02000002.1| GENE 136 154654 - 155880 1487 408 aa, chain - ## HITS:1 COG:BS_ytbD KEGG:ns NR:ns ## COG: BS_ytbD COG2814 # Protein_GI_number: 16079956 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Bacillus subtilis # 13 400 8 393 396 166 28.0 7e-41 MAKSDVAKERFFNLPVIVLISLSFMLGMSEFIVVGVLPDIAAGLKVSEVTVGNLVSLFAF VYAPVTPLGSALSARFPRFATHLTLVGVFLIGNVLCAFASNYGVLVVARILIALVSGTLV AIAMTYAPDVTTEQYRTKFIAWVFSGFSIASVVGVPVGTWVANTFGWRWAFHLVNVLTVV LIVLMVMVLPRNSRIVKIGFLPQFRLFFDRRIQLGVLAVVFGAAATYVFYTYLTPIMRDE VHVPEQYLSVGLVIFGAACLWSNLYGGKLADRGGGVEPLTHIRPIYCAHAVLMASLIVTH WVPVYGALLLVVLGMFMYLQNSASQVLYMDVASQSHPGSLNLAASLNSMSFNIGIAVGSA VGGLVNAHLGLMWLGPVGAIFLLCAVGTTTLLRPFAARERDFYAKQQA >gi|222441571|gb|ABXX02000002.1| GENE 137 156016 - 156945 935 309 aa, chain + ## HITS:1 COG:no KEGG:BDP_1563 NR:ns ## KEGG: BDP_1563 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 45 309 5 269 269 452 83.0 1e-126 MTRKTTTTAKNNRKPKKNKQPSLTKLRNAWKKANTPKRILIVGETLIASIVALALIVGLV RFVGWRVQVDEAVASQEQLQTQYDFNPGNIISDGLFFNGNALSEQQVNAIIEKQGAACSG EKCLKSMTFSTESQPANEYCEAYEGEPNESAAAIIYKSGKACDISQKVLLTVLQKEQHLL TATDPSDFQFKSAMGLSCPDDANCDPEYAGFFKQVYGAAKRYQYYVQHEDRYGYHAGTLN YIQYNPDASCGGSNVYIENKATALLYIYTPYQPNAAALDAGVGEGDACSTYGNRNFAIIY NSMFGSPRG >gi|222441571|gb|ABXX02000002.1| GENE 138 156995 - 158467 698 490 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351446|ref|ZP_03742469.1| ## NR: gi|225351446|ref|ZP_03742469.1| hypothetical protein BIFPSEUDO_03041 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03041 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 490 11 500 500 827 100.0 0 MGLLNNNDYIDPFKGSDYIDPSSNAERLSNQVNRDHARRESYVQRRYVKPAQSDQASRDR QAPQNTRSKQDGRSQQAQGDQSTRGDTLQTMLNDWSTQTMRYAQSMQQSLQQALRQNQQN PQNPQGRPSQPYNPPRIQTERATREFQSTSDKKQRRHKNGFVTVLEIVIIIAVIASIGGM LSDSMSNIISDFDGSTSQFEELSTQETVSEDVGKLYSTGGKALEVNIEGVQTGPEDLNGD ATLTVLLTCTNIGKKTMYPHAVADLMVMQNGIELAPAFTSNEDSDRTEFSGAEMKPKKSS QTTSSFVLTDTNSPVVVQLMNYSQHNVVRAAFSFDEVDIEGSLKHIDYAAVPQPEQVDAS NFDEDGSVTDYDESTLHFRVDSIEKTSPSYADHDIAFARISWYVENGSKYRAFLNYMDVS ATQDGTELHSTYLDDDSYSTTRKVTPGVKMTTTVAFETQSNSPVTFIFSDYGDEILRKTV NLRSIESLEL >gi|222441571|gb|ABXX02000002.1| GENE 139 158591 - 159952 1664 453 aa, chain - ## HITS:1 COG:MT2280 KEGG:ns NR:ns ## COG: MT2280 COG0174 # Protein_GI_number: 15841714 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 9 450 1 444 446 560 60.0 1e-159 MRMERWGTMDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFD GSAVEGLTRVSEDDMIVKPDPSTFQILPWRGGPQGTARMFCDVLTPDGEPSLGDPRHVLK QALSKAKEKGFTFYVHPEIEFYLFERQDDWSQTPTPIDEGGYFDHVPRSPGMDFRRATVN MLEQMGISVEYSHHEAGPGQNEIDLRYADALTTADNIMTFRTVVKEISLERGIHASFMPK PLSDAPGSGMHTHLSLFEGDANAFYEAGQEFNMSVTARQFAAGILYHAAEICAVTDQYVN SYKRLWGGNEAPSYICWGHNNRSALLRIPQYKPGKGNSARMEFRALDPVANPYLAYSVLL AAGLDGIDKQMQLGEPTSDDVWELTDAERQAMGIQPLPESLDEALKVMEKSDFVAGVLGE HAFEYFLRNKRQEWEEYRKQVTPFELKKYLPKL >gi|222441571|gb|ABXX02000002.1| GENE 140 160039 - 160764 939 241 aa, chain - ## HITS:1 COG:ML1261 KEGG:ns NR:ns ## COG: ML1261 COG0106 # Protein_GI_number: 15827647 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mycobacterium leprae # 1 241 2 244 245 261 58.0 6e-70 MSLTLLPAVDVRDGKAVRLRQGESGSETDYGSPLEAARTWVESGAEWIHLVDLDAAFGTG NNRDQLRAIVKELGDKVNIEMSGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIK KYGDRVAVGLDVRGHTLAARGWVKEGGDLFETMAFLDSVGCSRYVVTDVARDGMMSGPNI DLLREVAERTDAKVTASGGISKLDDLRAIKELADLGVDSAILGKSLYARAFTLEEALEVA R >gi|222441571|gb|ABXX02000002.1| GENE 141 160891 - 161538 832 215 aa, chain - ## HITS:1 COG:Cgl2044 KEGG:ns NR:ns ## COG: Cgl2044 COG0118 # Protein_GI_number: 19553294 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Corynebacterium glutamicum # 3 212 4 208 211 199 49.0 2e-51 MTSVVVFDYGFGNVRSMVRALADLDLDVTLTSDHRQALEANGLVVPGVGAFGACMEGLKS VGGDTVIKDRLRAGRPVLGVCVGEQIMFERGMEHGTGTPGLGLIKGDVELLDADVVPHMG WDTVEAPEGSVLMKGVEGERFYFVHSFAAMSAAPADTSGDQLDFGDAEERVTWCTYGRSR FVAAYERGPLFATQFHPEKSAEAGSQLLRNWIATF >gi|222441571|gb|ABXX02000002.1| GENE 142 161635 - 162417 756 260 aa, chain - ## HITS:1 COG:no KEGG:BAD_1126 NR:ns ## KEGG: BAD_1126 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 259 1 255 256 281 65.0 2e-74 MSDDRNNDFDDFQGFDGSNDFGDLNADGMHFSEEELEAAMAGFEQEFKDAEASKHERADN PPSEAFDSSEASDNAESSESSESSEVDDMLNAAEDSLKFEDELQGLLGNRAKVAVIITRL TSPRLLSAFCELSDISAQCIGSAQGAVAVLRNLDGDGPEAAVKDMTIVVAGMPAILAVNR ADKLEATMYVEGRAGKTFAPPVLFTSTAPFVEDLMLGITDMNALEQADMTIFDSADLDRD AAMSIIAEHTRFGRGTSSIS >gi|222441571|gb|ABXX02000002.1| GENE 143 162417 - 163016 746 199 aa, chain - ## HITS:1 COG:MT1637 KEGG:ns NR:ns ## COG: MT1637 COG0131 # Protein_GI_number: 15841054 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Mycobacterium tuberculosis CDC1551 # 13 199 21 210 210 229 60.0 2e-60 MARTATIVRETSESKVELSLNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLTIKATGDT DIDAHHTVEDIAIVFGEALKQALGNKRGIRRFADATVPLDEALAKAVVDISGRPYCVCTG EPEGFEYCMIGGHFTGSLVRHVMESIAMHAGICLHLQVISGRDPHHIAEAEFKALARALR FAIESDPRVDGIPSTKGAL >gi|222441571|gb|ABXX02000002.1| GENE 144 163076 - 164251 1578 391 aa, chain - ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 13 387 9 364 366 304 44.0 2e-82 MSETSSNAIPAYLPLRNDLIGEEPYGAPQLDVPVCLNVNENPYAPEPAVVETIAQRVKEI ALTLNRYPDREHIALRQAFCDYLERESGVKLEVDQLWGANGSNEIMLQLFQAFGGPGRIA LGCDPTYSMYPEYARDTFTTWKLAHRNEDFSLNVDATIKAIEDVKPAMIVLTSPNNPTGT PLKMDDLKRVLGAAETAEVAGAAEGVHPVVVVDEAYIEFRDPGTPTALELIGEYENLAVS RTMSKAFAFAGARVGYLAANKGIIDCVRIVRMPYHLSAVTQAAALAAFEHTDEQLSRVAH LRDTRNQTAAWLKEQTYKGQPLEVAETQSNFILFGGHFDDRDRIFDELLKRGVLIRTVGP DGWMRVCMGTDEEMARFREALVEVLRIVEQD >gi|222441571|gb|ABXX02000002.1| GENE 145 164248 - 165630 1780 460 aa, chain - ## HITS:1 COG:Cgl2049 KEGG:ns NR:ns ## COG: Cgl2049 COG0141 # Protein_GI_number: 19553299 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Corynebacterium glutamicum # 1 448 2 441 442 445 54.0 1e-124 MRIIDLRGKKLTRAEMLEAMPRAEMGTNEATDLVQPILDDVKARGAAALRDFAEKFDHIR PENLRVPVEAMKTAVDELDPEVRAAIEESVRRSRAVSASQVPAPFHTDLAEGARVSERWI PVQRVGLYVPGGKAVYPSSVIMNVVPAQAAGVESLAIATPPSRNNADGLPDKTILATCAI LGVDEVYAVGGAQAVAMFAYGAKGSEPQDGEILCDPVDKITGPGNIFVATAKRMVSGIVG IDAVAGPTEIAIIADKGANPSWLAADLIGQAEHDELAGSVLITDSEEIAEQVQENLKYRV PRTEHSERVNTSLRGRQSGIILTDGIEQSIDAANAYAAEHLEVQTADPDAVIAKIRNAGA IFRGPYSPVPLGDYMSGSNHVLPTSGTARFASGLGVHTFMKPVEVIEYDEQGLKTLAARV NAFAVSEDLPAHGESVLSRFIDDPYNKETIKEQEEQAGLR >gi|222441571|gb|ABXX02000002.1| GENE 146 165755 - 169345 3792 1196 aa, chain - ## HITS:1 COG:MT1598 KEGG:ns NR:ns ## COG: MT1598 COG0587 # Protein_GI_number: 15841014 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 2 1193 5 1182 1184 1166 49.0 0 MATSGNFVQLHNHTHYSLLDGASKIPDLVRRAKELNMPAVGITDHGNMHGAYEMWSTAVK EGVKPIIGIEAYVTPETARQDQTRVSWDTNWNPDIDPQHRRRNPNDVSGGGLITHLTMWA ETDEGLVNLMKASTDANLEGRVMRYPRMDKEILAKYSKGIIASSGCPSGIIQTRLLLGQF DEALRAAGELQDIFGRDNFYIEFMDHGLKIEKQVTDGLLDIAKKLNAPLLATNDSHYVRA EDAGSQDAMLCINSGSTLDEPGRFKFDGTGYYLKSAEEMRELFKDIPEACDNTLEIAERC NVMFDDHEDGAFMPQFDCPEGWDETSLFLKKVEEGLERRYDGHPPIEVLKQADYECGVIC QMQFCGYFLVVADYINWAKSHGVMVGPGRGSAAGAMVAYAMGITELDPIKHGLIFERFLN PERVSLPDIDVDFDPDGRGRVLDYVGDKYGRDKVAQCVIYGTIKTKQALKDSARIMGYEF SMGERITKALPPAQTGGKDIPLHDIFEPSSKRYAEAREFRELYDSDPDVKRVTDEAMGIE GLIRQTGVHACATIMGSEPISNTSPLLERTDGTVTTTLEYHTCETLGLVKMDFLGLSNLT VIRDTLNNIEANGKTRIDHTKIPLDDRATYDLLSRGDTLGVFQLDSDGMRSLLKTLKPNN FNDISALIALYRPGPMDMDSHTNYAKRKNGLQKITPIHPEVAEPLKEVLDETYGLIVYQE QVQSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSQEAAQAVWDIL VPFSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGASTNKDKTALYLGEARRMG IQVLSPDVNESVYEYSAVGDVVRFGLGAIRNVGKAAVDAIVKERENDHGKYVNFPDFIRR VPMEALNRRLVESLIKAGAFDSIDPNRRALFTIHEAAINSVVGLKRKQAEGQFDLFSDLE DAGEDDAGMGDAMVNVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILVSLREMSIA HLIDRAANMPDGQQVTVAGLITNVDRRMSKKGNPWAIVTIEDLESSIQCMFFGKVYETAA PELAVDTVVQIRGQVEKRDETVSMRATEFNVPTLEAQDEKPVTIMLPPIALDQSHVQQLG QILSNHPGPCEVKLALMDDKGNAKVLTFGDRFRVRRDTSLFAEIKILFGPSSLPLG >gi|222441571|gb|ABXX02000002.1| GENE 147 169380 - 170318 946 312 aa, chain - ## HITS:1 COG:Cgl2087 KEGG:ns NR:ns ## COG: Cgl2087 COG0564 # Protein_GI_number: 19553337 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Corynebacterium glutamicum # 2 301 6 308 310 295 51.0 8e-80 MSRLVPAPDALVGKRFDVAVAKMLGISRAKAAELIESGQARVLGRDISKSSTLQSGETVE FDIVEERTEPEPIARDMAVVYEDDDVIVVDKPVGVAAHASVGWTGPTVLGSLLDRGVHIT SYGAAGRQGIVSRLDVGTSGLMLVCKSDLAYVEMRRQFAEHEVVKTYHALVQGNLKENKA TIEAPIGRAKVSDFRFCVTPAGKEAITHWDVMERFGEATLVSVNLETGRTHQIRVHFSSI GHPLAGDAMYGANPQLGEALGLERQWLHAKQLEFRHPRTHVWTTVKSHYPADLQHALDVM RGRHDTQDKPEV >gi|222441571|gb|ABXX02000002.1| GENE 148 170315 - 170863 582 182 aa, chain - ## HITS:1 COG:MT1591 KEGG:ns NR:ns ## COG: MT1591 COG0597 # Protein_GI_number: 15841006 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Mycobacterium tuberculosis CDC1551 # 6 160 31 182 202 92 38.0 3e-19 MTNDQRRLRTRVAVFACIAVVALVLDQISKAWAQSALADGQTVRVIPGILSFTLVHNPGA SLGMGSNMTWLISLLAIVACVALAVLAIRTISMKWTVVFALAFAGALGNLIDRVMYAEGF LNGKVVDFLNYGWSVGNVADIFLMVAGVAAVVLLFVGEPFSQKDLDEQAAEQTKQTTGDQ NA >gi|222441571|gb|ABXX02000002.1| GENE 149 170885 - 172648 2506 587 aa, chain - ## HITS:1 COG:no KEGG:BAD_1133 NR:ns ## KEGG: BAD_1133 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 36 587 1 530 532 490 82.0 1e-137 MSNADFSQKIGGPVLESNNESNNSKASSPKRGVRFMALLTPKDIREHTFQTVRFKEGYDV DEVDDFLDQVTETVEALGKQAVASGQATQSLGPDVAGLNSKISELSAQVQSLQQENATLK SASEQAAGAGDQAAQAAQVAAAKLTEAEESNRALSAQNEQLKGQVDRLSAQVDQLTAQAA EAAGQADLGEQLTSMQHERDAFRAQTEDLSRQLASAQQQVVVAQQQAAEIQQLNARLEEA QEQVAQAQQLTQQHAAQSQQQDERAQQQAAQIQQLAQQLQESQQREAQLREQVAKVEPST ETGSLQKIAGAAASANTEPERATAMLTLAMQLHDQYVDKGKAKAKEITDESQRRYDELIG NANDYSNRTRTEADNYSEGTRSEADQYLADTRAKADGYLNQKTQEGDAYLTKRAQEGDDY LAQRTQEGNAYLDQKTQEGNAYLAQKTQEGDAYLDQKTQEGDAYLAQKTQEGDAYLDQKT QEGDAYLAQKTQDGDTYFSTKHNEADEYESEVQKRAFDYDSKTRTAADDYAQQVRDNLEA QTKVIEGNIQGLKQFETEYRARLTEFLGQLVSQVSDTNNYDQDSQDD >gi|222441571|gb|ABXX02000002.1| GENE 150 172652 - 172933 231 93 aa, chain - ## HITS:1 COG:no KEGG:BDP_1590 NR:ns ## KEGG: BDP_1590 # Name: not_defined # Def: hemolysin-like protein # Organism: B.dentium # Pathway: not_defined # 1 93 20 112 112 128 84.0 7e-29 MILSLIGSIVHFLVNAYILVLFIRMILDWVAVLASAWRPRGLVSSLIDAVYQLTEPPLRW LRQYIRPIPLGPIYFDVAFIVLYFILIAIDFLI >gi|222441571|gb|ABXX02000002.1| GENE 151 173027 - 173506 619 159 aa, chain - ## HITS:1 COG:ML0920 KEGG:ns NR:ns ## COG: ML0920 COG1799 # Protein_GI_number: 15827440 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 64 146 115 197 210 85 46.0 5e-17 MAGFMKSAMSYLGMTDVAEGDEDFNEEAESSETSFDSDHSVTPMASTPAATSAPREQTKA NPFQGGRVSRITTIHPKSYEDAQLVGRAIRDGVPVVLNLTGVAEAVAYRIVDFSAGVVFG VRGSIERVTPRVFLLSPAQVNIKVEEPQANNSSHDLFAD >gi|222441571|gb|ABXX02000002.1| GENE 152 173537 - 174781 1342 414 aa, chain - ## HITS:1 COG:MT2209 KEGG:ns NR:ns ## COG: MT2209 COG0206 # Protein_GI_number: 15841642 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 28 321 44 337 401 311 63.0 2e-84 MVSEIAQTDNFNDKTNIKVVGVGGAGGNAVNRMIAEGLQSVEFIAINTDAKDLMRSDADV KISLNDATSRGLGAGADPEKGAKAAQDHQSDIEESLKGADMVFVTCGEGGGTGTGASPIV ARAAHQQGALTIAVVTRPFSFEGPQRAASAALGIENLRKEVDALIVIPNDRLLELSDRTI GIVDAFKTADTALLAGVQGITDLISSNSYIHVDFNDVNAILRGAGTALFGIGSARGEDRA TQAAEIAISSPLLEESIEGAHGALINIAGPSDLKLQEAAAATQLVGKAIHPEAQIIWGLS LDDAYGDEVRVTVIAAGFDANSKKAAQAEAQKQAEPAESTVPLSALSAAPRAAAVPQQPQ PQLIQTPEAPKVQPLSTYIPSTPEPVVPSFDQTTEHEVVSSNDAGDLDIPDFLR >gi|222441571|gb|ABXX02000002.1| GENE 153 174665 - 175027 88 120 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTLGNHAIDGITASSTNTDNLDIRFVVEIVSLGNLAHHSLLSLAFTHNFIADTLQYAHF SPCVTAFFHFFIANVFISPAIYPLSVPPRRFNHISMSYSIAGVHRVIPKQRLTFIMRCFP >gi|222441571|gb|ABXX02000002.1| GENE 154 174959 - 176188 466 409 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 35 339 30 327 353 184 36 7e-45 MPDSIVTAYEESDVLDPRTDAVRPSVPPVMKPVDLGPVHVETPVVLSPMAGVTNWPFRVI CESYGPDGLYVAEMITARALVARNPKALRLCHFAPSEKIRSLQLYGVNPAIVEQAAKIVI DENMADHVDLNFGCPVPKVTRRGGGSALPWKTDLFREIIQRVVKVCDAANVPVTAKIRVG IDHEHETFLEAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVEALDIPVFGNGDI WGANDALAMVAETGCAGVAIGRGCQGRPWLFADIKNAFAGSDKRVDPTLGDVCRVVERHA ELLTEFYDGDEQMAVHDLRKHIAWYLKGFPVGGSTRRAFMECENLEDVRAEIGKLDPNIR FPERVVDKPRGRVRFAKKVHLPYGWLESRETTHDERQALFGDDPMDASY >gi|222441571|gb|ABXX02000002.1| GENE 155 176218 - 177693 1853 491 aa, chain - ## HITS:1 COG:MT2426 KEGG:ns NR:ns ## COG: MT2426 COG0423 # Protein_GI_number: 15841869 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis CDC1551 # 6 459 9 460 463 695 72.0 0 MAVSKLDEVVSLAKRRGFVFPAGEIYGGTRSAWDYGPLGVALKDNIKREWWRSMVVTRGD VVGVDTSIILPPAVWVASGHVSVFNDPLIECLNCHKRHRADKLEESYAEKHGDKLPENGL KDIVCPDCGTRGNWTEPRDFNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTSSR SKPPFGIANMGKSFRNEITPGNFIFRTREFEQMEMEFFVAPGTDEEWHQYWIDARTQWYI DLGVKPENLRHYEHPKEKLAHYSKRTVDIEYKFGFQGSDWGELEGVANRTDFDLSAHAKH SGEDLSYFNQATGEKYVPYVIEPAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLD PRLAPVKAAVLPLSKKPELQTVAHDLAADLRQHDWMIDYDEAGAIGRRYRREDEIGTPLC ITVDFDTLDDQAVTIRERDTMQQERVALDKVADYVAARIGEKHVRYPQVPVEMGGEAWPE SVKIAEAGGLY >gi|222441571|gb|ABXX02000002.1| GENE 156 177775 - 178386 783 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351463|ref|ZP_03742486.1| ## NR: gi|225351463|ref|ZP_03742486.1| hypothetical protein BIFPSEUDO_03058 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03058 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 203 1 203 203 360 100.0 5e-98 MNKHKIAWIALAAGIVFVIMLTWLVGVSPQISHIKSSDAQTAQIDENNKETRDEIETLRI ASETIGLQKDRLRQLQRQIPDGYNQQEFINSLDASAAGTGVAIKSVNFDDAVDADIPAEM QGTIQAGQLVQVSVSITATGSYDAMRNFVASVQNINRIAVPENVTYTLDRNGDETKNAVV IDCKIWSLLLDNDTVEDENATKQ >gi|222441571|gb|ABXX02000002.1| GENE 157 178399 - 179343 773 314 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351464|ref|ZP_03742487.1| ## NR: gi|225351464|ref|ZP_03742487.1| hypothetical protein BIFPSEUDO_03059 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03059 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 314 9 322 322 466 100.0 1e-129 MKQIGSSHRGRRGKIKDNPNPETSDGEKTSILSMNISDIGKALRASSSKTSKKADLPAEW NVRANLLPRSIVTLNRDRAIKYLLSYVLIVVVVAAIAISAGMAVRVSWADHRVEEAQAKT LSLQKEKAEFKDVEDTLNSLSDSQRSRIAALYDEMDWMKVVDSLNGALPAGGQYTNLSLS SFQIGGSDASSHSATSSVWSGNGVISVDFTVLSPDFISAKDFIGNFAAIPTYKTGYVSSI TENSDENGTTYTYTGTVSLKMDTNTTSRSDNAAGADEANRALQQQLRDSLNKAAAGESTD TTDSATATDETSNE >gi|222441571|gb|ABXX02000002.1| GENE 158 179375 - 180421 1026 348 aa, chain - ## HITS:1 COG:DR0770 KEGG:ns NR:ns ## COG: DR0770 COG4972 # Protein_GI_number: 15805796 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilM # Organism: Deinococcus radiodurans # 27 343 35 384 391 83 25.0 7e-16 MRSITALSIANDAIRAAVIADPYSDLPTIKHFQAIPLPNGAVVDGEVVDHDVVAGLLNTL VKRFKFPREDTALVYSSRRMVFRETDFPYMSLNDLKSTLPFQAKGMIPLPIEESELDFVP LNVIDSEQGKQLHGILVATLRNGLEKTARTAEDAGFVITSIDAGPFALARLFADTNQQQT EAVVNISGNGTDVIVLENGQPAYMRVVPSGADDVTDAIANALSISFEDAERIKNQIGLQN VTGDERLEKAEEVIRETTAQLIVGIRNTLNLYDVDHAGGTISGVVLTGTGARLIGLPPVL ASSINKVVRIGDPFIRFRLSKEVERQNIMAHAIDLGAVLGLVIGKKPR >gi|222441571|gb|ABXX02000002.1| GENE 159 180468 - 181292 706 274 aa, chain - ## HITS:1 COG:VC2426 KEGG:ns NR:ns ## COG: VC2426 COG1989 # Protein_GI_number: 15642423 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Vibrio cholerae # 12 268 10 283 291 110 31.0 2e-24 MSIVNDTPTVVLLLVASLVIGCIFGSFLNVVIWRVPNHISLVNPKRSFCPNCEAPIAWYD NIPIISWLVLGAKCRHCKEPIAVRYPIVEALGGLSFLAVTLGALFGAYSPWILPELYVFA AVSIVIAYIDLDHHLILNVVLLPTLIATLALLALASLGTNEWNRLGRAVICAIVLGAFYL LLSIIWKGGMGDGDIKLAFILGLITGWLGWSQFIIGAFAAFFIGGFLSLVLIIGKKVDMH GGIPFGPSMLLGIWLGIFVGAPIATLYLQVTGLA >gi|222441571|gb|ABXX02000002.1| GENE 160 181317 - 183692 2332 791 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351467|ref|ZP_03742490.1| ## NR: gi|225351467|ref|ZP_03742490.1| hypothetical protein BIFPSEUDO_03062 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03062 [Bifidobacterium pseudocatenulatum DSM 20438] # 21 791 1 771 771 1432 100.0 0 MKNGLWAGLNRRYRARLRQRMGERGAAMMLAVLFVMVVLTTSALVMTILLSQALPYRNNK ENAQVGYAAESGLEVALSFLREAEASKDYKKLLPSTASNTGNASLDETFTTASDGSVLLN NAEVSNDVSATGVSSFTPDDISYRVQIGYYDDDPSSSPAKRLTSESELKNAKYAWVRSYG YINRYPNGRSAGTETSARRAMSAIYQFETASGDDSYVISTKGGRLGMGFYAAAPNNERRT NQPTWKEIASYDVDENGDPTGMVNYVNKPGSKNAADAMSNTITMNPANQTCMLATTKPVD KVETLDAMLDPNGKPVEGSALVILMQAHKKDSSSDDLYYTEQCKANGAYKDLNTWVYWKD DSIRPASNLTLCVTGADITHVGGGTAGAATLQKCGESYGPNYQSDYYTDPDKKAQQDEKN DPSSLLNKYQKWAFYNGFINAGYYNELDSVRDEANKYDASLPESQGYAVGGVQMQKKTRF QVLEVSNKANVGATIQYLSGGHWASNVDDAVDLTPHFLMVSKWDYSLTDVKSWFDVNGDF EDATASFGQAGEAGYATKQIVNETSGFCISSSQDGFDAYTSTCRVGGGDFNPYCYHNTIN GNPAQSSSDLHQIDYCGVSDSTKRKTDQAEYVEDTSSDGSGVNTQIWTMVNGSKRCYGFG GSGKFQLMECSAAPTFTRYNEKASDEHSKGTFQLNGQCLTEVYPGDKIDGNPSYSGRIDG HADVIMAKCGSSRDFLNREIKSQVWNASVNLGTGGSGGGVIYGGGSSTTLEPSSTKGYVT SKELNPSTIAW >gi|222441571|gb|ABXX02000002.1| GENE 161 183714 - 185063 1369 449 aa, chain - ## HITS:1 COG:all2442 KEGG:ns NR:ns ## COG: all2442 COG1459 # Protein_GI_number: 17229934 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Nostoc sp. PCC 7120 # 51 445 13 406 407 237 36.0 3e-62 MRYRSDTLFRIHIRSIVRQSFHGGVMAREQAQVAFQNGTKKWRYKGVSADGRTKQKGVIE AQTRDQAIDRVNKLGLIPTELVDVNAGTGLNTNIEIKAFEKYPSKKDFAVMSRQLATMVA AGVSLIRALNIVTEQIGNVKLRNAVRDCMQQVEAGSSFSEAMDNNPDHLFPPIMINMVRA GETGGFLDKSLITVADSFEADVRLQGQIKGALAYPVVVLGIAVLLVGVMLLTIVPMFDSM YASMGAELPWVTQIMVDMGKTAPVGIPVIIVCAVAFVMFWKRNRNKDIIRTWWDPFTLKA PVFGKLTTNVALARFCNNFTSMLASGVPILQALDIVGSTSGNYVIDEASKRVSRLVERGY RLADSMGTEKVFPNMMVQMVAIGEDSGAIDQMLASAGKAYDEEAQSIAKQLTSLLEPLMI LVLGSVVGFMVVALYMPMFSMFDAINGQA >gi|222441571|gb|ABXX02000002.1| GENE 162 185112 - 185558 482 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351469|ref|ZP_03742492.1| ## NR: gi|225351469|ref|ZP_03742492.1| hypothetical protein BIFPSEUDO_03064 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03064 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 148 15 162 162 234 100.0 2e-60 MKSVRNALNRRAKGEKGFTLVELLVVVIIIGILAAISVPIYLNQRKSAWNSQTESDVKNA SLVVETASTANNGKLPSEINGATATCSKSQNTGCTLGGNTITVTEGVTLKITGKADNSYT IEGENENSGTAIFLYDSANGVVSKTGTK >gi|222441571|gb|ABXX02000002.1| GENE 163 186073 - 186735 595 220 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351471|ref|ZP_03742494.1| ## NR: gi|225351471|ref|ZP_03742494.1| hypothetical protein BIFPSEUDO_03066 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03066 [Bifidobacterium pseudocatenulatum DSM 20438] # 18 220 1 203 203 322 100.0 1e-86 MSGTTSGKLRIRAVAQRMARGESGVTLVEMMVSLFIFAIVSTMFTTAIVQYLHSTSADAI RSRSSTEIATSVQSLDRYVRYAEGVEYDATNHTITMVTPGDSGAKQCVVITYQDATWKNG TVSDYGSVKVKTKPYDASVTSWSTRAVLGSVMNNESGGTSDDSMFASRLFTVDGTNRVVR YSPVTGSYVSGKPVTSNTSTSFTARNVKSGGTAIDFTPCV >gi|222441571|gb|ABXX02000002.1| GENE 164 186748 - 187533 700 261 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351472|ref|ZP_03742495.1| ## NR: gi|225351472|ref|ZP_03742495.1| hypothetical protein BIFPSEUDO_03067 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03067 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 261 12 272 272 470 100.0 1e-131 MEYSLRTAGDAPDSGVAASRVNRLPKRGESGFTLVEVLVAIVVLSITGLAAAQFAITAIR TSYAQQQRSTAVSLGDDGMERMRAQIANVDANQYLDELIKGMGETSVTAAQKNLSDVGAI ASQLADLSYTSSPDPDKSKYIQPVRATAGKDAKHTEYTVNTVVERCFRASGEISCKTASQ LGISRSSATSYTANTSTSATADILDPGKTVSGAFTFGAHTYMPMIRVVVGVTWDDNMHQG KTCLYTTSELLDIGVDNKLII >gi|222441571|gb|ABXX02000002.1| GENE 165 187397 - 187774 98 125 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLNTTIATSTSTNVKPDSPRFGNRLTRLAATPESGASPAVRKLYSMSSSFTRCHPIIGSG RNSARNQTRCHKHELLYHDILPTFSQQHISQKTLPRLAFTCFCGYNADLAVHNTAIVVAH MTSNN >gi|222441571|gb|ABXX02000002.1| GENE 166 187870 - 189627 1755 585 aa, chain + ## HITS:1 COG:aq_1971 KEGG:ns NR:ns ## COG: aq_1971 COG2804 # Protein_GI_number: 15606969 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Aquifex aeolicus # 93 583 67 563 566 438 47.0 1e-122 MSDAGSGGRFPFLRRNKNSDTPNAFPQSMDPIAPTTGEIHQVFTPSTPRHAAMTSDATGD FPAMPTSTEGMDEQTERQYAMALAQGMSLPFVDLNEYQIDKEVISMVPDDLCRRNQLLPL SIVNGRIAVAMANPKNFAAVDDVSATTGMPVIAMVAMPSQVRDCINRFLRANAELTELSH EIAATAKKEVDLEQDDSEDASPVARFVSLLINQAIDDHCSDIHIEPQEDGLLVRYRIDGV LHIFQKAPRAMTQGVISRIKVMAEMDIGERRKPQDGRITVRHNGQKVDLRVAALPTVWGE KIVMRILSTPSGNLKVEDLNFSERNFDVFSKAYNRPYGMVLVTGPTGSGKSTTLYATLGD VARPEINIITVEDPVEFRMEGINQVQVNNKAGMTFAAALRSILRADPDVVLIGEIRDEET ATIAIEASLTGHLVLSTLHTNDAPSAVTRLTEMGVEPFLVSSSLAAVMAQRLARRLCKKC RKADTATPVELKMMGVPYTPGSPLPTVYRAMGCRECSNTGYHGRVAIQQVMGVDTQMEDL IARGATSLEIEQAAKSKGMTSLREDGWQKVLQGITSVDEVLRVTV >gi|222441571|gb|ABXX02000002.1| GENE 167 189674 - 191614 1876 646 aa, chain + ## HITS:1 COG:all2443 KEGG:ns NR:ns ## COG: all2443 COG2805 # Protein_GI_number: 17229935 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Nostoc sp. PCC 7120 # 299 641 11 356 372 315 48.0 2e-85 MTDIEQQPELKTEMNTATDPDAQPTWDANTDLSGLKGVTIPSTAPSFNEDPRRGRHWSPD NAIQADDDSLRSIFASLDAMPALRHGSGTVPDPMSKAAVEQQPAAEPQQSAQRQSMQQSA APQAVASQSVAEPQPAPTRPAETPLIAEQQELSYDTAFPETPENEAVDQQNLQFDDDVTE VTPAFEYHGPIQQIDGDPPSFIPGGTPFAQQPDDYAAYEENAQTMQPSAINHIAQPTPAA RPQPNMNNRLIVDFIVPETNDSDEDAVPGQRRIKAHQVKETLHAEHPDADPEFVAAICQL VELNASDLHLVVNDPPMLRVDGKLRPAKGLSVWNKDRTYEAIKVMTNELEMERFKDDLEL DISFSIGDLLRFRVNVYRDRLGVCAALRTIPTEIKTAQELGLDPHIADLALLPRGLVLVC GPTGSGKSTTLAAIVDRANAERADHIITIEDPIEFVHQHKRCVMSQREVGTDTKSFAEAL KRALREDPDIIEVGELRDLETISTALTAVETGHLVFATLHTQDAGSTVDRLIDVYPENQQ QQIRVQVASTLRAVVVQTLIPRASGHGRAPATEVMINTPAVAALIRGGKAHQIRTVLQSG EKEGMHTLDQDLARLVNKGVITFEDALAKVQVLEEFEKLCGARSSF >gi|222441571|gb|ABXX02000002.1| GENE 168 191650 - 193464 886 604 aa, chain + ## HITS:1 COG:no KEGG:BAD_0060 NR:ns ## KEGG: BAD_0060 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 33 590 48 594 594 377 37.0 1e-103 MSNTAETPTIIQPDVSANRVTNLRKRLFTWFAEQRLHCIVFIAYVTVTVTVSCFHEPWFD EAQAWLIARDCSWKELLTVRTHYEGHPPLWWMLLAIPAKLGMPYEIGLKSLNLMCAALMI WLLEFKTKLPELLKVILPFSYFLCYQYGVTSRPYALMIAAMLLIAINWNNRNTKPWPVIL SMMLLCATSSYGLAIAGMLALNWTIQFLCGERSLIKNKQRFAGLVLLLVFAIILLLNVLP APGTYHGDFDIHGTATTSPAWVSVFNTWLVMPSETLFTSTLSDGNMQFIALTPSELFMPC VMSCLMWCFLIQICLRRKTASLLLTTYLGISVAFTAHLSMHHAGIILGFFIAILAIDCDI EKINSNDWPQWIRNLNNRVMTLLGPKKTERYLRFFKILGLIFMLVSVYWTASASICDIRY DYSSSRAVASFIKTNHLEQYRWMAGWTRVSKNDTASNPEINKIIDKGGYCGGTDCIDYTS WYGSTLIDSAPYFDHTLLANAYKGRSYSSWEWCVDPYAGKKDIETWKSWGEPEFYDTLYQ PFFFSDLGYDRNHYTKIKIAETKTPWKSTWSEGACEIYVRNDIYENVLHSPDPGIDWPDG ATRR >gi|222441571|gb|ABXX02000002.1| GENE 169 193654 - 194523 1025 289 aa, chain + ## HITS:1 COG:PAB2432 KEGG:ns NR:ns ## COG: PAB2432 COG2145 # Protein_GI_number: 14521296 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Pyrococcus abyssi # 14 281 7 257 268 133 33.0 5e-31 MGDDSYAAALREQIAQAVNDVRETTPLAQSFTNFVTMNLVANAQLAAGGTAAMSFLPDDV IDTAEIAGSNYINVGTLLPFFKDALPEIAYKLHKNGKTWVLDPVAAGIGKTRTAILESFR TYPPTIVRGNASEIIALDAMWGLAQHDSTVPGTRPAGVEAVDEVDSAVDAAKRVARHLAK YSPVGAGAVAVSGAVDLVTDGERVFRLPGGSAMMTKITGAGCSLGGVTATYLAVAEPLVA AISASLLYNRASEIAEAKSSGPGSFQVALLDALWNVTAEEVAASEIIID >gi|222441571|gb|ABXX02000002.1| GENE 170 194653 - 195405 751 250 aa, chain + ## HITS:1 COG:BS_thiC KEGG:ns NR:ns ## COG: BS_thiC COG0352 # Protein_GI_number: 16080880 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Bacillus subtilis # 15 229 13 209 222 96 35.0 5e-20 MNNYSYASMRDTFDMSAYFVVGPQDCKSRTITGVIEDALRGGATFIQLRAKNTDAKDITS MARDIAQVIENNGKSDSVAFVIDDRVDVVWQARHKGIKVDGVHIGQTDLEPQEARALLGE DAIVGLSAETESLVKLINELPAGCIDYIGAGPLHVSTTKPEASVGGNDGSGHTLDEAQIN AICDASDFPVVVGGGVTADDMEMLAHSKAAGWFVVSAIAGASDPEEATRNMVSRWKAVRG DAKHGHVLRK >gi|222441571|gb|ABXX02000002.1| GENE 171 195474 - 196316 938 280 aa, chain + ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 8 280 7 263 265 264 51.0 1e-70 MTSTLAPVLSIAGSDSSGGAGIQADLKTMLANGVFGMTAIAALTAQNTTGVTMVTNTPPE MLAAQIDAVFEDIPPVAVKIGMVSSVELINVIADRLIAHDATNIVLDPVMVATSGAKLIE GDAIAALTSKLFPLATVITPNMPETQALCELAVEQGADAIDYENGESISSENDMVTAGHM LAGHFGCAVLVKGGHGTQDASDVLVEPSGKVTWFRARRINNPNTHGTGCTLSSAIASHLA LGETLPEAVDSAKLYLTGALEAQLDLGHGSGPMDHAWKWR >gi|222441571|gb|ABXX02000002.1| GENE 172 196384 - 196749 553 121 aa, chain + ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 24 120 16 115 117 70 41.0 7e-13 MTLDRNAEKQEVPINPETGKPYINTLAAVAISPAGASPEKSTYVAQAVDVIRQSGLPSET NAMFTNIEGDIDDVLKVIRDATMKLAGQGYRTDVVIRLDIRPGFEGQIHAKQALVDEILS E >gi|222441571|gb|ABXX02000002.1| GENE 173 196850 - 196939 73 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTMKEIAEATGVSISTVSLVLTAGMKDV >gi|222441571|gb|ABXX02000002.1| GENE 174 196936 - 197892 726 318 aa, chain + ## HITS:1 COG:mll4964 KEGG:ns NR:ns ## COG: mll4964 COG1609 # Protein_GI_number: 13474146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 9 317 35 336 341 116 31.0 5e-26 MKAPLAALVREKADELGYTVNPLARSLRTCRTRILGFISEEVATTPYAGGIILGAQDAAS TYGYMIITVSTDGRASEENEIATLKRYGVDGFFYSKMSNRIASVPASLGDYPVVMVDATD ADNQIPSIEPDEFQIAYDATKRLIQADCKRIAYIGCSENMIAQDGRFAGYQAALQDSGFA YDPSLVCNVLNNGPALRAVDKLFDERNPDGFFCFNDARAWYVYECAARRGLTVGKDVSIV GVDNHRVFAETLEPQLTTVELPHYEMGYWAACKLISMIERKPVDSSSWPNTTAPMPPLDS PIPAKIHCALIEKGSVRS >gi|222441571|gb|ABXX02000002.1| GENE 175 198180 - 199505 1969 441 aa, chain + ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 420 7 405 415 311 40.0 1e-84 MASTTRSAWKNPSYLQSSFGIFMFFCSWGIWWSFFSRWLTDPAHGLGMTSAEQGQIYSIN SLATLVIMFAYGAIQDQLGIKRKLVIFVSAIAALVGPFVQFVYAPMLTAGGTTRFIGVLI GSIVLSAGFMAGCSLFEALTERYSRKFGFEYGQSRAWGSFGYAIVALCAGFLFNINPLLN FWVGSICGLGMLCIYAFWVPAEQKEELKKEADPNAAPTNPSFKEMISVLKMPTLWVLIVF MLFTNTFYTVFDQQMFPNYYASLFSTTEIGNATYGTLNSFQVFLESAMMGVVPIIMKKIG VRNSLLLGATVMFLRIGLCGVFHDPVSVSIVKLFHSIEVPLFCLPAFRYFTLHFDTKLSA TLYMVGFQIASQIGQVIFSTPMGALHDAMGDRPTFFTISGIVLAALIYGFFVIKKDDQEV GGDPFYTDKQLKAQAAAEANA >gi|222441571|gb|ABXX02000002.1| GENE 176 199652 - 201208 2001 518 aa, chain + ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 21 505 6 469 477 322 38.0 1e-87 MTGFTPDAPVLHEIKNHSEALAQAEAGVAAMAAERNNRWYPKFHIASNGGWINDPNGLCF YKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPTLEEEKDGVFSGSAVIG DDGELKFYYTGHRWANGIDNTGGDWQVQMIAEPDNDELTSATKRGMIIDCPLDKVDHHYR DPKVWKTGDKWYMTFGVSSVEKRGQMWLFSSDDMVRWTYERVLFEHPDPNVFMLECPDFF PIKDAEGNEKWVIGFSAMGAKASGFMNRNVSNAGYMIGTWTPGEAFQPETEFRLWDCGHN YYAPQSFNDGERQIVYGWMSPFVEPIPMQDDGWCGNLTLPREITLGADGDLHTAPVAEME GLRENTTDFGAISLDVNGEQTIADDAEAVEIEMTIDLNASTAERAGLKIHATEDGSYTYV AFDDQIGRVVIDRQAAAQGDRGYRTAPLSAEELASGELKLRVFVDRGCVEVYVNDGRQAM SSFSYASEGPRAIKLVAESGTLEVKSLKLHTMKSIGLE >gi|222441571|gb|ABXX02000002.1| GENE 177 201454 - 201549 76 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAFEFVFAAMPEPMCELVFEGMDPVAESLR >gi|222441571|gb|ABXX02000002.1| GENE 178 201506 - 202357 749 283 aa, chain + ## HITS:1 COG:mlr6798 KEGG:ns NR:ns ## COG: mlr6798 COG0600 # Protein_GI_number: 13475671 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Mesorhizobium loti # 34 270 30 266 275 116 31.0 6e-26 MGSGMAANTNSKAGIVAKLLEALSAFAHVCKRRIPTVIAVVLLLAVWEAWVRIGNVPSTM IAAPSEIAQATVETWSTLWPATQVTLLEGTVGFLFAVLFGILIGILLYCSCIANAALLPL LSAAQTMPLISIAPLFLIWFGFEISGKIVIVTVFGLFPIAVQTIRGLEAVPQFYSDVALT CGATKAWTLWHVKLRVAARQIYGGIRVSAAYIFATAATAEYLGARKGLGIWLQAAYNSFR TPLIFSATLVIIAITGVLVCLVNLSERVLLGPADADADPDADQ >gi|222441571|gb|ABXX02000002.1| GENE 179 202644 - 203744 1414 366 aa, chain + ## HITS:1 COG:mll1755 KEGG:ns NR:ns ## COG: mll1755 COG0715 # Protein_GI_number: 13471703 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Mesorhizobium loti # 54 354 33 326 338 189 37.0 1e-47 MSIFSRHDATARTHIASTIIALFSAIAMLFSVTACGQSNDSATSTASGSSDLTKVTFMLS WAPDTNHIGVYVAKNKGYFKEAGLDVDIVAVAQAGAEQAVNNGVADFALSNLTNVSTYAV KGATIKQVLQVQQKPSAIWCSLASNTEIKSPKDFDGKTFATFGSNESDAVIRRMIQSDGG KGEFDKVTVGTSTFQTLSSNKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADTI GVITSDKTISNNPELVKKFVQATKKGYEYAYSNPDDAAKILVKEAPDANLKLDFVKKSMK TIVDGQYWGDPAKIKDGSFTFGTNDVEGAQQYFDFLAQEDAYTDSHDKVVHDAPQAKDLA TDEFLK >gi|222441571|gb|ABXX02000002.1| GENE 180 203934 - 205211 947 425 aa, chain + ## HITS:1 COG:Cgl1931 KEGG:ns NR:ns ## COG: Cgl1931 COG1957 # Protein_GI_number: 19553181 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 145 422 74 309 316 143 38.0 8e-34 MTRLILDVDTGIDDALALAYLATFDTVDVLGVIGTYGNVSVDTAVRNTSYVLERLGLRHI PVIRGSSHPSWARCFIPDAGCAQFHGTDGLGGFGPACDSSSSDTAFSDIFSDNSGSDTVF SRDYRSLISVGGYALDDVHANPAVDSFELSLTTDSASFIHADDSSADSVSEGVQFIIDQV RAYGFDVTVVTTGPLTNIDAAIAAAPDIAGKLKLVMMGGTLTQEGNCWDLTAETNIIQDP EAADRVFHSGADITMVGLDVTLQCLMGSDATRAWREAANADTLTSSTASQVADSLDGSAG SSNAASARTSSVAASPSASDVRVFLADMADFSIAANLKADARLFSQGMPLHDPLAAAVAV DPSLVTCIDLPMKVELETGDFHGTRGRTIGDPAGLIDSNAPRIHVAFQVDSSRFVPTFTT RISTL >gi|222441571|gb|ABXX02000002.1| GENE 181 205273 - 206064 942 263 aa, chain - ## HITS:1 COG:MT2430 KEGG:ns NR:ns ## COG: MT2430 COG0020 # Protein_GI_number: 15841873 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 12 259 38 294 296 279 53.0 4e-75 MAFENVDYKSLDIPAAPFSDPSIIPDFPKNKVPRHIGVIMDGNGRWAQQRGLIRTDGHQA AEPVVFDTIAGAIEAGVRYLSLYTFSTENWKRSPQEVRFLMGFSRDIIHRRVEQMNAWGV RVRWSGRRPKLWKSVIDELEKAQERTKNNTTIDVVFCLNYGGRAEIADACAAIAKEVRDG KISGDRVTEKMISEHLYNPDIPDCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCG RDVLWRSIDHYIHRDRRFGGVKK >gi|222441571|gb|ABXX02000002.1| GENE 182 206070 - 206798 618 242 aa, chain - ## HITS:1 COG:MT2431 KEGG:ns NR:ns ## COG: MT2431 COG1381 # Protein_GI_number: 15841874 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 1 242 1 241 265 170 41.0 2e-42 MPLYQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSLL IAEGRSLDVISQAESVSAYARGICTDFKAYTAANVICETADKLVVTEQERSVAQYRLVLG ALNALSKHAHEAAAIGDSYVMRALAIAGWTPRLRACVVCGEPISADRPWFFSISAGGLMC LTDHIRESFDVSWNAICQLQALVDGDWGELDGTALLPETRQMVEKWGEYYLERPIRSMRL LD >gi|222441571|gb|ABXX02000002.1| GENE 183 206889 - 208601 1602 570 aa, chain - ## HITS:1 COG:no KEGG:BAD_1156 NR:ns ## KEGG: BAD_1156 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 570 1 583 583 932 80.0 0 MNGVSDQERQSVMSSAESQSSQWTRGRRLMVSLPIFIILLGILVSVSNLTASSWEYEPTG QTIETLSSDTAVTFDNPSGKTLAKRGDYEVTQRYVTIEAKQPSTGEIQQVKVLIREPKDA GNNRPGVVFMHGAGYGTCDNSFGDMATDLSSAGFVTAVLDKPVWSTNDATRDYPGSAAIY DQVITMLRDLDNVDASNVGIYATSESTWISSYLLDQDPDVAFQVLLSPMVYSPRHSLGFL AAQDFALVGAHDGYQSIVRRAFNIDAELFGLTNLDLDTLNPQAYSIPTLVAYGTKDVMTA QVEGTEKIIDMAHKAGNWDVTVRTYPIANHVLRLGDESNSGTPFADAYVDDVISWAVGIT RGLQQTSERVAGTNLYQSIAVPLELQANSGLTIYLVVLHASMVLLLLVIGVLWLIVLVRK IWAHAHRRRYVLGLRPVFKNALITLAVATMATFVLFGAGLGEVVMGVVKLAWGGAPAEDP GMMYWSWPVIQMVCVVVVWAWSRVFVRLIEEATNRGLAQWPPRKGAIGAIVSGRQPVLAS TRFGRVMFWITAVTMLYVLLVFAFWGLFIY >gi|222441571|gb|ABXX02000002.1| GENE 184 208695 - 209891 1328 398 aa, chain - ## HITS:1 COG:MT2936 KEGG:ns NR:ns ## COG: MT2936 COG0821 # Protein_GI_number: 15842410 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 21 390 15 384 387 459 66.0 1e-129 MPEIEKPFRKTGEAAISESPLHPRRKSHRIMVGPVPVGGGAPISVQSMTNTLTANVPATL QQIAELTAAGCDIVRVAVPSQDDADALPEIVKKSPIPVIADIHFQSKYVFQAIDAGCAAV RVNPGNIRKFDEVGPSICKAATDAGISLRIGVNAGSLDKELYAKYGGPTPEALVASAMKE ARMFEDVGFHDFKISVKHHDVITMVETYRLLASKGDWPLHLGVTEAGPAWQGTIKSCLAF GALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGRSQVDVIQLA NAVTEGLKDVTAPIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKVIQTVPEDQI VETLLVKAQEIAAQMEADGQVPVNATGPVVVPVAQGNC >gi|222441571|gb|ABXX02000002.1| GENE 185 209979 - 211157 1241 392 aa, chain - ## HITS:1 COG:Cgl1969 KEGG:ns NR:ns ## COG: Cgl1969 COG0743 # Protein_GI_number: 19553219 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Corynebacterium glutamicum # 3 392 5 387 392 330 51.0 2e-90 MQTSTVVILGSTGSIGTQGLDVISRHLDRFNVVGLAAGGSHVELLAQQAVQFHVSKVAIF NTNAVHALQDALNQAGASHVEIMAGPEAVIAMAGSGADVVLNGITGSIGLEPSIAALQAG SQLALANKESVVAGGHLLFDAQVRAQQINPVDSEHSAIWQSLRSGTHGEVSKLVVTASGG PFRGWKREQMTDITPEQALNHPTWNMGPVVTINSSTLMNKGLEVIEASRLFDVPPSRIDV TVHPQSIVHSMVEFRDGATIAQASPPDMRLPIALGLSAPERLGNIAAACDWTKAAMWTFE PLDDEAFPAVSLARHCLEASEKHTAVLNAANEQAVHAFLEHRLPYLGIVDTVKEVLDEMD AELRGNPLFASVEEMSQLELEARRRADDLINK >gi|222441571|gb|ABXX02000002.1| GENE 186 211249 - 212814 1348 521 aa, chain - ## HITS:1 COG:no KEGG:BAD_1159 NR:ns ## KEGG: BAD_1159 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 521 53 579 579 418 56.0 1e-115 MAQEPESERNASGIARTSKRKWGYDSEQVDAFLERAHMLYEGEGAQLTQHDIQNVSFDLV KGGYVIAQVDAALARLERAVVDKQTTWEISQHGRVAWKAQTESLFRQLDAHSKREHGERF KPGEGKEPSYDRKQVDRIVDQCLTKAAGELGVEEVSEDDAKKLVDLNSQTVANVIFTQRK GKRGYDERQVDYYLNECVQLLTRLESYARVADFVGEPSESAMTAANPSATSLASQETQVV SPLFAVPAVSAEPIAQPAQVQNSTDSFDALNKAEREIFTTPATSPVSIPATQTAAPTYAP VVPPVFQPTISTPSAPVTPAAPVTPEPQAAPVAPAAPEQSLAHLFKASNAVAEEPSSAGT ETEAFNPLSDDGALSYDAPAAPAAPVIPDTSVAHQPEESHGINIAPDSSLAALAQMAQNI DAPDPVEDTFTPRMPSLSTPNLPQVNTDSINLGTLPTVPPSFTLEPATSADHSTTATPVE PAKPAEEEKKNETKPATNPMFEASNSNLDVDIPDLSFPSFE >gi|222441571|gb|ABXX02000002.1| GENE 187 212781 - 213029 95 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSSRIQVPAPLAIDLLLHYSTSPLYVIDSTLLAFLWKIQRIDTQITPFFTHLLWKEPLL GSATHVEAVAGNEYCTVELCAS >gi|222441571|gb|ABXX02000002.1| GENE 188 213321 - 213737 416 138 aa, chain - ## HITS:1 COG:no KEGG:BAD_1160 NR:ns ## KEGG: BAD_1160 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 138 1 138 138 229 97.0 2e-59 MNQTASDNAEEFGFHAGDLVQEWLWDDDVDDSIRAKIEELTGEELVDEDYDSAVDGVIIW WRDGDDEDELSDTIVDAYAVLGDDGPLWVLTPKPGRPGAASSSTVQSAAKTAGMNAATPL TVSGDWNGIRLRAFGKGR >gi|222441571|gb|ABXX02000002.1| GENE 189 213833 - 214717 831 294 aa, chain - ## HITS:1 COG:Cgl0759 KEGG:ns NR:ns ## COG: Cgl0759 COG3480 # Protein_GI_number: 19552009 # Func_class: T Signal transduction mechanisms # Function: Predicted secreted protein containing a PDZ domain # Organism: Corynebacterium glutamicum # 171 282 232 343 350 98 42.0 1e-20 MKETRRIHGKNTRSGAPGRVKRWLIGAEGWLSARSWRYLAGPLVAVLCVLVLIMPSAYVV QVPGPTQNVLGEVSGKQVIAVSGAKTYKDSGQLLLVTVNASGVPGYPVSNAQALVAWADS KSTVMPQEAVVPVGQTAEEYKQSSDKEMTSSQDSATAAAKKFLEEHGYDVSGMKVSMHVD DIGGPSAGMMYTLGLIDKVTGEKLSGGKIIAGTGTMNDKGEVGEIGGIRLKMLGAKRDGA TWFLAPESNCSSVVDHIPEGLNVVKVSTLQEAYDALVAVRDGKGASLPQCSAGE >gi|222441571|gb|ABXX02000002.1| GENE 190 214793 - 216370 1604 525 aa, chain + ## HITS:1 COG:MT3287 KEGG:ns NR:ns ## COG: MT3287 COG5282 # Protein_GI_number: 15842777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 76 442 83 428 472 197 35.0 6e-50 MDENAIRQWFIDCFGPIQGEMAWNQFSNMPEELRDQLMSQDVSKLPKPAEVRSMMQAFTA GGLNTFGDIQHITEEGPINVKLAKSLALQQANGEGSETSVSAEYGEMARRAISEANLWLD TACEFNPAQGETQVLTRAGWVEGCIDSWAQFASPIAESMSDALASILSQRFGDSEFHTEI SGIFAGPVQIPIPDDMKDPAKLMRFVGNTSFAMQLGRAAGDLSHEVRGSFDQSISLLKNP AGGLIVQNVVEYAKSLEIDVNEVMSYLALQELAHSRLYASVPWLMPRFEALLGKYARGTS IDLDAMEEQIRDAQSVDPDSMADAVNITKVAFPDTPEQQQAMKSLENLLALVEGWVDTVV WRAGMAHIPHIEQLREMLRRERAIGGPAERTFESLIGLQLRPKRMREAAALWDNICATEG AQARDAKWSHPDLLPQLPNDDDDNTSQSQNNGSSENTENTTFAASNATDMASQPLGDADG MTIDWDAELSKLLDEEEHKGGESDTNGSDSDDSAESGSNNDTDAE >gi|222441571|gb|ABXX02000002.1| GENE 191 216393 - 217892 1051 499 aa, chain - ## HITS:1 COG:MT3291 KEGG:ns NR:ns ## COG: MT3291 COG0210 # Protein_GI_number: 15842783 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 1 498 1 577 700 286 37.0 6e-77 MSATAEEILDGLDEAQRAAATAVDGPVRIIAGAGAGKTRTVTRRIAYACATKAWNPRSTI AVTFSVKAAAEMRSRLSKLDVAADVKAATFHSAALHQLRQVWPDVCEGPMPFISRNPREL VERSLRRVTAFQVDDDTIRNLQAEINWCKISLIAPEDYARVCAATHRQPPSGLEPSQFVD VYKAYEAEKTNRNEIDFDDILLIVCHLMESDEEVASAIRSNIRWLTVDEYQDVSPLQHRL LTRWLGSNRNICVVGDPAQTIYSFAGASSYSLLNFDSEFGPLTADINLNNDYRSTPQIVN YANRVLAASPQRADYLKLSSERSKGRRVVETIYGSDWEEAQGVAARIRKLVDAGESPADC AILTRVNAQQKILCKALAEQHLRYRVRRDSGWQNSALSDDTQTRLAMLEALGVGADLSGV TISTIHASKGLEFKHVFLIGCSEGLIPYGLPQDDDVLEEERRLMYVAVTRAEDTLDVSYA RTREGNEGERARRVSRFFR >gi|222441571|gb|ABXX02000002.1| GENE 192 218007 - 219566 1354 519 aa, chain + ## HITS:1 COG:no KEGG:BAD_1164 NR:ns ## KEGG: BAD_1164 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 519 1 523 523 743 78.0 0 MTERSKFMIAALTSAAMPNAAIAGARASEQTNPTDEGYGVDHAVVQDAAGKLYDVFASNT PEGRKRLAGRVRAAQTLSQARELGGLGFAVDSIVAFSNGDLKHSATGDTSVLVATHHVGQ ARPLELLTLDDCSSVGTALGAIHRLRPDFLQEAGYPTFVTGQIRAQLTAWIKRLRQAGHV PQEITTSWANILETDGLWSFSTCPVHGGLRDGDVLFSGSSITAVTNWQDMQVNDPARDLA WIFAKLDENHRNALLSAYGRMLGNRLDDLIMLRANLWLQMEQVGDFISALNKADNAKIMQ FKAQVERLAHQLGVATAKNRVQTETKQESKDRPQRPPSTITVGTLLNESERRRNAAAQQN DSDTTGERHVDAVDMDDSTGDFDVTGDFDVTGSQPVRKTKEIVNDATEAFVPAGAQPSQA PSGNTNEHEATSVSTFIPEHSAKERHESMPSSSTMVISRLETADDNDDTNEESIPASHSE AATVLIPLLERDEATMQKAQAQINQWEAEDATDEKLRVE >gi|222441571|gb|ABXX02000002.1| GENE 193 219627 - 219851 352 74 aa, chain + ## HITS:1 COG:no KEGG:BDP_1626 NR:ns ## KEGG: BDP_1626 # Name: not_defined # Def: ATP-binding protein # Organism: B.dentium # Pathway: not_defined # 1 74 1 74 74 120 93.0 2e-26 MDIELGIQNVARTVTFSTEQSADEVNTAIADAVENGKTINLTDDKGRRIVVPAGSLGYAI IGSETKHAVGFGNL >gi|222441571|gb|ABXX02000002.1| GENE 194 219980 - 220906 545 308 aa, chain - ## HITS:1 COG:CAC1092 KEGG:ns NR:ns ## COG: CAC1092 COG0613 # Protein_GI_number: 15894377 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Clostridium acetobutylicum # 15 262 6 246 274 128 32.0 1e-29 MIRVGTAAPPAEGWDIHCHTVFSDGTETPRALLQEARALRLHGVAIADHDTTSGWQDALA ASREVRLPLLRGTEITAVDESVSVHMLAFQYDPLNADISEMFASTREARLRRTKRMVELM AQDFPITWDDVLAQVREGKRTTIGRPHIADALVAAGVYETRSDAFADAVSATSKYYIPTP SPTTHDVVAAVKGAGGVVVIAHAGDPRRNRTLLTDRQIESLITEGLDGLEVWHRGNPSEQ RERLLTIARRHDLLVTGGSDWHGKGKPNALGENLTSDETVQEIINRGVHLSKESSKAKIK NRNAIIDA >gi|222441571|gb|ABXX02000002.1| GENE 195 220999 - 221664 716 221 aa, chain + ## HITS:1 COG:ML1666 KEGG:ns NR:ns ## COG: ML1666 COG4243 # Protein_GI_number: 15827882 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium leprae # 27 213 26 204 214 76 27.0 5e-14 MSDFSGEQVAEATLDDDYTKPRGWRHTATWTYLVMLIASAVALVVSFVLSAETLKMARNP GQKLSCDVNAVMSCSAVAESWQAEVVKFAGLSFPNAFFGIAAESVFVTIAVIGLTKVAVP RWFASCTWLGGLAALAYSYWLTSQSLFVINALCPWCLCLMFSTTVQFMALSHATAVVQEI PAKREGVRTYYRLNYDLMVDALWIVTLIVIILVEDGPLLFS >gi|222441571|gb|ABXX02000002.1| GENE 196 221781 - 222680 1079 299 aa, chain - ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 9 294 9 271 277 125 35.0 8e-29 MSIPSIVYKAHATGNDFVVYLDAEGTYEPTADEVRFLCDRHFGIGGDGLIRLTHPQAVSD LNDKQIAVCAADNADWFMDYRNADGSLAEMCGNGTRAITLFAQRQGIAGQPGGEPFRLGT RAGVKVLTSLGDVPTLGKDVFQVEMGSWKRGDLDGYEVTIPGTAGSARGTFVDMGNPHVV AVIEDAFSSLPTVEQLDLVTKPVVAPRIESDQNVEFVRIDEQSEGDNEGNATMRVNERGC GETLSCGTGLCATAITLRAKTGIDHWTITVRGGTLRVDVTDNDVKLTGSATIVGKIELL >gi|222441571|gb|ABXX02000002.1| GENE 197 222779 - 223555 720 258 aa, chain + ## HITS:1 COG:CAC3250 KEGG:ns NR:ns ## COG: CAC3250 COG0796 # Protein_GI_number: 15896495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Clostridium acetobutylicum # 6 257 7 255 256 205 43.0 8e-53 MTSTAPIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVK RFVEQGVKAVVIACNTATSAAANELRDKYDIPIIGMEPALKVACDRGHGNRQRVIVAATP LTLRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLDDHDVVMHTLHQYFDQYDLSTI DSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDADGGIELA NSDTSTQIAQLAQSLLDR >gi|222441571|gb|ABXX02000002.1| GENE 198 223638 - 223802 247 54 aa, chain + ## HITS:1 COG:no KEGG:BDP_1631 NR:ns ## KEGG: BDP_1631 # Name: not_defined # Def: phospholipase # Organism: B.dentium # Pathway: not_defined # 1 54 208 261 261 94 87.0 1e-18 MALAKEYEQDGRVLILAPESLYGLNTLSKSFEGLERMYRAGYAAVEAIPAFLES >gi|222441571|gb|ABXX02000002.1| GENE 199 223760 - 223855 80 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQFENEPLAGVGYGRYLQLSRNAGMASTAA >gi|222441571|gb|ABXX02000002.1| GENE 200 223947 - 225596 2234 549 aa, chain + ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 44 549 44 533 534 449 47.0 1e-126 MKNNTFRRLLAMAAAGAMLTSIAACGSSSNDDTASNGSDSTSLISVNNSEPQNGLIPSDT NEMGGGRVIRYLFEGLVSFDAKGKQHLEVAESITPNEDATTYTIKLKKGWKFTNGEAVTA HSFADTWSFAANVKNAQKTASRFSTIKGYDELQDPNVDPKATLSGLSTPDDYTLVVELNK PDSVFPTKLAHQSMFPLPSVAFKDIKKFGQAPIGNGPYKFKSWSHDKNIIVVPNRDYKGS RKVSNKGIEYRVYTNEDSAYSDVLSGNLDVMDQIPQSAVKTFRQDSSVIAYSQAGSSFQS FVIPERLEHFGNDEEGQLRRQAISMAIDRDQIVKKVYNNTKTPTTDFTSPLVPEYVKKLE QNGSNLKYNASKAKELWKKANAIKPWSGNFRIAYNADGGHKEWVDAVCNQIKNTLDIDAA GEPYATFSDVRNQVTNRTIKTAFRAGWMLDYPSAEDYLNPLYASSSADGHGSNDGDYKSA EFDELLNAALAQTDVKKRTEDFTKAQEVLAKDLPVIPLWNDNVAAASATNVKNVSFDYTN LPTYNTITK >gi|222441571|gb|ABXX02000002.1| GENE 201 225727 - 226665 847 312 aa, chain - ## HITS:1 COG:STM0847 KEGG:ns NR:ns ## COG: STM0847 COG1446 # Protein_GI_number: 16764209 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Salmonella typhimurium LT2 # 22 302 5 299 313 182 38.0 6e-46 MNEAALPQSTVHIAQADPDGILLVIHAGAGNRGKKDTPERRAQVEQDLNRALEAGYALLE QGAPAEDAVCAAIRVMEDAPEFNAGRGAALTSEGIVSMDSCLMTGVDGEVGSACGLTTSK NPINVARAIKEKTKHVMFAKPGNDLLKEWGIELCDSEYFITPARQESLREAQSNGDEWEK HGTIGAVARDSSGNIAAGTSTGGITNQMPGRVGDSPLPGCGTYANNDSVAISCTGIGEAF VKEVAAHQVSDRVLYAKEEPIEAAKAALDGVARHHGDGGMIVVPAHGEGAMVFNSEMMNC GWKSPKGSYVQS >gi|222441571|gb|ABXX02000002.1| GENE 202 226822 - 227670 995 282 aa, chain + ## HITS:1 COG:PM0638 KEGG:ns NR:ns ## COG: PM0638 COG4667 # Protein_GI_number: 15602503 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pasteurella multocida # 4 282 2 276 280 139 31.0 5e-33 MAHRTAMIDVGGGFRAIYGAGVMDRMLEDGISVDHCYGVSAGSANMVSFIAKQHGRNHTF YTQYAFRKEYASFDSYVKNHNFANLDYVYSTLSNHDGENPVDYAAFEANPTGFTVVACNA EDGSTKYFGKSDVGYDNFDILKASSAVPVACEPYAIDGIPYYDGGIADPIPVQKAIDDGH DRIVVILTRPKDTVREQKRDIGPARILRRTHPQAAEKLLNRYQTYNDEVALAKEYEQDGR VLILAPESLYGLNTLSKSFEGLERMYRAGYAAAEAIPAFLKS >gi|222441571|gb|ABXX02000002.1| GENE 203 227684 - 228700 880 338 aa, chain + ## HITS:1 COG:RSp1267 KEGG:ns NR:ns ## COG: RSp1267 COG0583 # Protein_GI_number: 17549486 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 48 322 18 285 294 84 27.0 2e-16 MNTPADSNTRENANTNTDISITANATGFSTKTLNPQILVTLWNVERLGSFSAVARETGWS QPAISQQIRKIERELDAKLVQRTSHGVELTPIGRILARHGQLIDNRVTQAVKDVEEYQRN GSTHIRLVAPPSVCSSFVARVLVHISKTSDIRVSLMQMEPPEAMEALEQGLADCAIIFQY NSLPALAGPDDLEVAPFGVDPLMLLIGANNAIARQYESSHLPVQLVSARSEQWIAGCETC QANLVSLARAAGFTPEITHSTDDFWATQNLVEVGMGVSIVSRLATTAGIQPDLAALPIAD NNAFRTVCFVTRKVDDRPAVARVKDEIERASHQYLENI >gi|222441571|gb|ABXX02000002.1| GENE 204 228919 - 230127 1239 402 aa, chain + ## HITS:1 COG:Cgl2256 KEGG:ns NR:ns ## COG: Cgl2256 COG1168 # Protein_GI_number: 19553506 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Corynebacterium glutamicum # 29 396 16 368 368 216 33.0 7e-56 MKHRTGSGFDADAIDHTTAADLAAVGSDKWTRYPGCIGAFIAEMDYGLAPCIQKAIDNAC DHCKLGYIPEPWKQRVAEACAGWQRSHYGWDVDPSIIRVVPDVLEAYEIFLRELVGAGNS VIVPTPAYMPFLSVPKLYDVDVIEIEMLQSGDAETGEAQWVFDFDAIERAFAAGCHAFVL CNPHNPIGKVLTLEEELRLSDLAAQYDVRIFNDEIHAPFVFEGKHIPFPTISEQAALQSM TATSASKSFNIPGTKCAQVLLTNPADRDMWAVKAEWSEHQTATIGAIATTTAYNEGDLWF QDAFAYVCRNLALFDEQMRERFTGVGYIKPQGTYIAWLDFSPLGIDDPAAYFLEKAQVAL TDGRSCGETGAGCVRVNIAMPYPLLVECLDRMFNALHADGLL >gi|222441571|gb|ABXX02000002.1| GENE 205 230096 - 230344 181 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSQEQQIIAGYFAGGRLNAGTHVQTHVNLPSHVDSMQISNGTITVDSEVGKGMTFTVML PLVEENTEYVAKPTIIRRRAMR >gi|222441571|gb|ABXX02000002.1| GENE 206 230264 - 230932 491 222 aa, chain + ## HITS:1 COG:no KEGG:BDP_1634 NR:ns ## KEGG: BDP_1634 # Name: not_defined # Def: phospholipase/carboxylesterase # Organism: B.dentium # Pathway: not_defined # 1 222 1 204 204 302 67.0 7e-81 MRLNVSTSIETAACEIAGDDLLFLGFHGFSNDENEMIRIIDAIYDVPKQDASSTDNSIAP AQHPNYLSFRGTYERPYIGSYYWYPDGCSVGERRRECSAVGDAVVRLLDSPAYAHFRKVL IGFSQGGYLSYRMVAEHPDAFDMAILMSPSFKGETAEPLPATGRTRFALCYGSEDRTIPL SDQQRARNKLAQTGNLTYFEYPGMVHGICDQEIRDLRAWLGL >gi|222441571|gb|ABXX02000002.1| GENE 207 231484 - 231675 103 63 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1290 NR:ns ## KEGG: BLJ_1290 # Name: not_defined # Def: putative transcriptional regulator # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 54 27 80 94 68 64.0 7e-11 MAELDDSALRQAVIGDMTKAKGMGQITKEAGVGRESLYKSLDRNVNPSFHTIMKGSCTLS AAG >gi|222441571|gb|ABXX02000002.1| GENE 208 231784 - 231924 57 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGCNMSYGNTYDWRISPMVQPDKGPERESPNQRETPIALLDGAAGG >gi|222441571|gb|ABXX02000002.1| GENE 209 231935 - 232282 70 115 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSLTTTHEMNDQSKTEIRQVSQFLVHPHPPDRFHIHYFFYIAFRSDPMRNTQSQFLLVL PLKSPRADKNPGFPLLAVPHMWNPACAGNTGHKQGKQHPRGGRNDADTDFNPRSP >gi|222441571|gb|ABXX02000002.1| GENE 210 232311 - 232565 216 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351513|ref|ZP_03742536.1| ## NR: gi|225351513|ref|ZP_03742536.1| hypothetical protein BIFPSEUDO_03109 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03109 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 84 29 112 112 126 100.0 7e-28 MTGRSPHGERGLKYTLVHTVQTPDMSLSSWRAWIEIRRSARSSTASPSFSSWRAWIEIAG SSAFAPYKGSFSSWRAWIEMIRLR >gi|222441571|gb|ABXX02000002.1| GENE 211 232611 - 232769 61 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRATAALLGDCHVGQISIHALHEESDTTTIRFCAWGLLFQSTLSMRRATSM >gi|222441571|gb|ABXX02000002.1| GENE 212 232814 - 233023 216 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRATYPIFDENYRASLFQSTLSMRRATGAYGAQCWDLWAFQSTLSMRRATKIITTKNAD LEYFNPRSP >gi|222441571|gb|ABXX02000002.1| GENE 213 233020 - 233331 182 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351514|ref|ZP_03742537.1| ## NR: gi|225351514|ref|ZP_03742537.1| hypothetical protein BIFPSEUDO_03110 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03110 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 103 36 138 138 173 100.0 3e-42 MRRATRLIPADVLEAIFQSTLSMRRATHVKGLGVNPDEFQSTLSMRRATEPSGHVEPERN ISIHALHEESDQFQQPRHRQIPISIHALHEESDNLAPENQPRV >gi|222441571|gb|ABXX02000002.1| GENE 214 233350 - 233463 56 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRATYPPELLTVTRLFQSTLSMRRATISSSSKSAGD >gi|222441571|gb|ABXX02000002.1| GENE 215 233460 - 233777 172 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASSRSPHGERGLKSYFAITRDDNKLSLSSWRAWIEIEIIARGISVRGGRSPHGERGLKY SACRYYGHGQQSLSSWRAWIEIVRTLFLVIKSLSRSPHGERGLKC >gi|222441571|gb|ABXX02000002.1| GENE 216 233797 - 234168 132 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351515|ref|ZP_03742538.1| ## NR: gi|225351515|ref|ZP_03742538.1| hypothetical protein BIFPSEUDO_03111 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03111 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 123 1 123 123 204 100.0 1e-51 MLFQSTLSMRRATLSAQRMALASRFQSTLSMRRATPRCHLTVKFRDIFQSTLSMRRATTN ILPVWGYEGISIHALHEESDSAAGHFCPLFETQASCLALSISNNTADTTNNMSKTSNWLS VSF >gi|222441571|gb|ABXX02000002.1| GENE 217 234255 - 234470 114 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSAYTSHKHHSKTGHLAENTILLARKHTLNTGRHTQTLNPAYPTPYRYGTMPFCLCYIII TSLTGKLRSRP >gi|222441571|gb|ABXX02000002.1| GENE 218 234422 - 234712 229 96 aa, chain - ## HITS:1 COG:SPy1561 KEGG:ns NR:ns ## COG: SPy1561 COG1343 # Protein_GI_number: 15675453 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 87 1 87 97 103 57.0 7e-23 MMVVVAYDVSTETPEGKRRLRLVAKTCVKYGQRVQNSVFECSVSPSDYLVLVHDLLKIAN TDEDSLRFYKLGARYADRIEHYGRERSLPVNDVMMI >gi|222441571|gb|ABXX02000002.1| GENE 219 234780 - 235811 373 343 aa, chain - ## HITS:1 COG:BH0341 KEGG:ns NR:ns ## COG: BH0341 COG1518 # Protein_GI_number: 15612904 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 343 1 343 343 389 53.0 1e-108 MKQLLNTLFVMTEDAYLALENDNVVIHQNDKTLAKVPLRSIEGIMCFSYKGASPALMGRC GKLGVSMAFYSPRGHYYCSVLGEENRNVLLRREQFRVADDEQKSLCYAKSFIVGKLYNAK WVLERTKRDHALRVNIDRLAEQSGKLSAALLEARKSLTVDELRGVEGLAAKDYFYAFDDL VLKNKDDFFFTNRSRRPPLDRLNALLSFCYSILTNDCIAALQGVGLDPYVGFMHTDRPGR ASLALDLVEEFRPVLADRFVLTLVNTGAVKPGDFEIRENGGVLLSDSGRKKVLTAWQKKK SDQILHPFLQEKISWGLVPYVQALLLARSLRGDLDDYPPFMWK >gi|222441571|gb|ABXX02000002.1| GENE 220 235811 - 236488 138 225 aa, chain - ## HITS:1 COG:SPy1563 KEGG:ns NR:ns ## COG: SPy1563 COG1468 # Protein_GI_number: 15675455 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Streptococcus pyogenes M1 GAS # 7 220 3 217 224 188 45.0 8e-48 MKGPEGYPEEDWLALSGIQHFSFCKRQWALIHIEQLWSENYLTTAGHLEHERAHDYATSE SRGDTLIMRDLRVYSRALGITGACDVVEFHKSNDGVPLHGRDGLWLPYPIEYKHGKYKTI DADRLQLCAEAMCLEEMLACDIPEGALFYRQTKRRERVKLDEDLRNMVEADFLQMHDLFS RGWTPKVKQTRSCSSCSLRDLCLPELRKVKSAKAYIEERLKESGE >gi|222441571|gb|ABXX02000002.1| GENE 221 236522 - 237367 829 281 aa, chain - ## HITS:1 COG:BH0339 KEGG:ns NR:ns ## COG: BH0339 COG3649 # Protein_GI_number: 15612902 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 257 1 252 283 276 61.0 4e-74 MAALENKIDFAVVFASNNANPNGDPLNGNRPRTTSEGLGEVSDVALKRKIRNRLQDAGET IFVQSDDRSDDGAKSLSDRFNTYLKTLPKEEQKQKNLVFQKVCEQWLDVRAFGQVFAFKK AKDVDEVSLGVRGPVSIQAAFSVEPIAIDDVQITKSVNSETTDTGKKSSDTMGMKYRVSG RAVYATYGSISPQLAEKTGFTAEDAEKIKEALVTLFENDESSARPAGSMEVLDVVWFTHN SKSGQYSSAKVHRSVSVNVDGTVAVNGSSIPDLRYEVIEGR >gi|222441571|gb|ABXX02000002.1| GENE 222 237427 - 239304 443 625 aa, chain - ## HITS:1 COG:no KEGG:BDP_1641 NR:ns ## KEGG: BDP_1641 # Name: cds1 # Def: CRISPR-associated RAMP Csd1 family protein # Organism: B.dentium # Pathway: not_defined # 1 609 1 612 629 683 56.0 0 MSLSNNLLLINESVHNAAGKIPRSGDGSTLDIRKALIPPGHTTLPTLLTLGVNENGEILR LLREKQTIVIPCTESSMGRTIKPVPHPLFDQLQYLDLHFDKEKTSMYLEQLAAWKGDNVK LNAIYRCVSEHSISEEAARFNVEITEKDRKAGVCFEVEIGLQNSDVSNDPDIQAQWISYL YHDRQKKGKDMFGEDLYAPILNFPKKIVSVNGNAKLLSANDSTNFTYRGRFASKEEALQV DGETSQKIHSTLQWLVNNHGTITDTQAIVICSVKNPNEKPKLDPQEGSYDFGSLFSSDVD EPEAPRNDIADALTATNFQYAQVFSKVLRGYGNANKLKKHADPMMIVILDAATSGRLSVT YYRELSKDEYVESILRWHVDAAWPLKMYDKEKKKFVAYEGAPPFADIISCAYDVSDRSSK AYKRFAKNTKKQLIECMFGGESLPRFILDATYHRVTKPMGYDAPGAWLRDFEIACSLWKK HYIDDARKQNKQEDTISMYLEPTRNDRDYLYGRLLALADRFENGVLYKQGISDTRPTNAV KLMSNFVAKPFTTWGTLWKQLMPYLKSANGAPWFQNSVDEVMALFKEGDFEDNRALSPLF LLGYSCQRRESMRKAQEASQKSKEN >gi|222441571|gb|ABXX02000002.1| GENE 223 239308 - 239781 261 157 aa, chain - ## HITS:1 COG:no KEGG:BAD_1185 NR:ns ## KEGG: BAD_1185 # Name: not_defined # Def: CRISPR-associated Cas5d family protein # Organism: B.adolescentis # Pathway: not_defined # 5 157 88 240 240 248 75.0 5e-65 MSGGNDLSYYTYLKDVRYQVLAHFEWNDQREDLVADRDENKHHNIALRSVQKGGRRDIFL GTRECQGYVEPCEFGSGEGFYDGYGEWNMGYMFHGFTYPDENEDHDFIARFWSPVMSDGI IEFERPESTKLDGRIIRKNQSVKEFALGSNLQPVGEE >gi|222441571|gb|ABXX02000002.1| GENE 224 240258 - 241901 1318 547 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 1 536 267 787 800 308 35.0 3e-83 MSVPTGGGKTLASLNFALHHALETGKRRIIYVIPYLSITSQTVATFRNMLGLDADSNIVL EHYSTAGLQNSGNTGSIGTSEEEDVKERQRKLASERWDNPIIVTTMVEFLETVMSARGTK LRKFHNMANSVIIFDEIQSLPLNIINPFNEVVSFLSTILDSTILLCSATQPLLERTARKN LRLSDEPDLIDNTDGYEEKLKRTRIIASQESKSCEELANIIYEQALRNGNCLSIVNTKSE ARKMYQCLQELNADGQFELIHLSTAMCGKHRADQLARIKVLTDPHDSKPVICVSTQLIEA GVDLSFACVVRAMAGLDSIMQAAGRCNRNGESKEIKDVYVYPLQGEERFKDYLPEIHRGK KLTLQIMGEHPDADLLSTGMLNEFYGMLLQSEDRDGGNSLLDGPLWKKENAGKTIYELLA YNESQRKQFENNTMGERYNPFFAQAFKTVGNEYRVIPKITHNVVVPYGNAMELLDMLGHG ELREKIAILRRLQEYTVSLFDYEYKILNEKHAISIASEDFDICVLNGDYYKGEYGVVTET DMSLLMI >gi|222441571|gb|ABXX02000002.1| GENE 225 242031 - 242675 353 214 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 4 207 3 208 800 68 27.0 1e-11 MTLLAHKDADGGVQTLRDHLHNAGDLAESYESEFSQIPRMAALLHDVGKVAQQFQTYLIS GKGRRGEIPHARQGAFVVNDLPISNSAAEIVKEILELVIAKHHGELPDCINEIGDEAFLT GFTEADKQNPKYAYGEIKQGLHDLDLDLQDTFQQAEKDVFDFVGRTKLLKLSKDSRYFYS GLLVKYVYSRLIDADRTDTAYFETKEQYHPIKAD >gi|222441571|gb|ABXX02000002.1| GENE 226 243248 - 246562 4338 1104 aa, chain - ## HITS:1 COG:MT1587 KEGG:ns NR:ns ## COG: MT1587 COG0060 # Protein_GI_number: 15841003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 4 1088 3 1019 1041 1125 53.0 0 MSENNVYPKAAAGEQSANVAPNPSFPKLEESVLDYWEKDATFQKSIERRPSGDHSQNEFV FFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGI DSVDQVKEMGIDKFNDACRASVLKYTNEWKDYVHRQARWVDFEHGYKTLNIPYMESVMWA FKQLYDKGLAYQGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVAVKLRDEEDAY AVFWTTTPWTVPTNFAIVVGADIDYVEVRPTEGKFAGKKFYLGKPLLGSYAKELGDNYEI VRELKGAEMEGWRYYPVFPYFAGDENAVEGKVPGPEGYQIFTADYVDTVEGTGLVHQAPY GEDDMNTLNAKGIKSVDVLDAGCKFTALCPDYEGMYVFDANKPILRNLRAGDGPLERIPE EQRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVSVTKIKDRLLELNQEINWIPGNVK DGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLDELKADFGDYPRDHE GNVNMHRPYIDELTRVNPDDPTGKSHMHRISDVMDCWFESGSMSFAQYHYPFENKETFEQ HFPCDYIVEYIGQTRGWFYVLHIMATALFDKPAFKNVICHGIVLGSDGQKMSKHLRNYPD VNGVFNDFGSDAMRWFLMSSPILRGGNLIVTADGIRDTVRQVMLPVWSSYYFFTLYANAA NNGAGFDARALRADEVAALPEMDRYLLARTRRLIEKTQSSLDNFLISDACEAVSDFIDML TNWYIRNNRDRFWNEDANAFNTLYTVLEAFMRVIAPLAPMEAEAVWRGLTGGESVHLADW PFLADEQTGEATELGRVLVDDPALVDAMEKVREVVSGTLSMRKTKQIRVRQPLHKLTVVV ENTDAVAAYDEILKSELNVKNVELCTLEDAEAQGLKIINELRVNARVAGKRLRKDVQFAI KASKSGAWHVNADGAPVCETPNGEIVLEEGEYELINSVEEKNAEEAANSVSAALPTGGFV ILDTELNDDLIAEGYARDVIRAVQDARKAADLEISDRIALTLTVPADDVAKVEQFKDLIA SETLATSFNVKEGGSELSVEVAKA >gi|222441571|gb|ABXX02000002.1| GENE 227 246964 - 248412 2105 482 aa, chain - ## HITS:1 COG:ECs5102 KEGG:ns NR:ns ## COG: ECs5102 COG2211 # Protein_GI_number: 15834356 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 13 455 1 428 469 119 25.0 1e-26 MGNGNNGSKGGNLLSRVAYSFGNVGQSAFYNALSTYFIVYVTSSLFSGVDKSVATKLIGI ITGLVVVIRIAEIFIDPLLGNIIDNTNTKWGRFKPWQLIGGTVSAILLVLVYTGLFGLVN VNTTLFIVLFIITFIVLDVFYSLRDISYWGMIPALSSDSHERSTYTALGSFGGSIGYNGL TIVVIPIVTYFSWVFTGKYVESQSGWTCFAIIVAILGILTVCSVAFGTKESTTTLRAKAE DNGGPLQAFKALAQNDQLLWVALSYLLYAIANVATTGVLMYLFKYILDNTAAYSIVGVIP VITGLVMAPLYPILNKRIPRRYLYLGGMVLMIVGYLLFAVGSSNLAMVIVGLVFFYLPQT FIQMTAILSLTDSIEYGQLKNGKRNEAVTLSVRPMLDKIAGACSNGIVGFIAVAAGMIGD ATAADMTAANIGMFKVCAFYVPLGIIVLSLLVFLFKVKITEKMHDEIVEELEAKLASGEI SE >gi|222441571|gb|ABXX02000002.1| GENE 228 248731 - 249741 935 336 aa, chain - ## HITS:1 COG:BS_lacR KEGG:ns NR:ns ## COG: BS_lacR COG1609 # Protein_GI_number: 16080470 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 331 1 328 330 208 38.0 9e-54 MATIKEIAQRTGFSQATVSRLLNGDPTLSVREETRRKIIQASEDLGYSVQTKRIVIPHEV ALLDNEKSDEALRDSYFTDLRSALECNAEQQRMEMTVFHNLDDMIARSSKFDGFMAIGAD QISEEDLERLHRAMPYGVFIDVNPAPNLFDSVQPDLQQTMHDAVAACAAKGMKRVGFIGG KGCLMNFYEVDEENRATYFRREARRFGIQSDGLVYSDGLFTVSNGRALGEQFVRDHNGVL PDAVIVAADVIAVGVLQAFNAVGVLVPRDISVISINNQTISQLTSPPLSTFSIDQNELAR VATLMLGDAISGKRTIRQHAYLSTSLVVRDSFVPAK >gi|222441571|gb|ABXX02000002.1| GENE 229 249860 - 250066 152 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351527|ref|ZP_03742550.1| ## NR: gi|225351527|ref|ZP_03742550.1| hypothetical protein BIFPSEUDO_03123 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03123 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 68 1 68 68 87 100.0 2e-16 MQQSHEHMTEPPSRTAGWPQPNTMHGKDNKKSLASKSQFQSKGFSRGSVPFKATGHKGGI SRQGSKRG >gi|222441571|gb|ABXX02000002.1| GENE 230 250118 - 251578 1880 486 aa, chain - ## HITS:1 COG:CAC3415 KEGG:ns NR:ns ## COG: CAC3415 COG1132 # Protein_GI_number: 15896656 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 11 485 191 626 627 527 57.0 1e-149 MLAFTVILFVVVRKVVSRSGRYFVKQQIAIGDVNAFVEEAVNGQKVIKVFNHEDVTQTTF DKKNEELFEASAEANTWGNVTMPIVGNMGYLLYILLAIFGGFAAISGLGNFGLSGAGPLT LGTLISLLTLSRSFVNPLGQVSMQFNMVMMALAGASRIFALMDEQPEDDGGSVTLVNVEL GEDGRTMTEVDHETGHWAWKREEGDDGTRSLKAAQSLSPRAAEVAMKARETAITSPDGRL TLLQGDVRFTDVNFGYNPDKPVLHDITWFAKPGQKIALVGATGAGKTTVTNLINRFYDIQ DGMILYDGISVKGIRKPDLRRSLGVVLQDVNLFTGTVMDNIRYGRLDATDEECIAAAKLT NADGFIRMLPNGYQTVLEGDGSGLSQGQRQLISIARAAVADPPAMILDEATSSIDTRTEE VVQAGMDNLMKGRTVFVIAHRLSTVRNSDVIMVLDHGRIIERGSHDELIAQKGEYYQLYT GAVELE >gi|222441571|gb|ABXX02000002.1| GENE 231 251421 - 252167 456 248 aa, chain - ## HITS:1 COG:CAC3415 KEGG:ns NR:ns ## COG: CAC3415 COG1132 # Protein_GI_number: 15896656 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 16 194 1 178 627 162 41.0 5e-40 MTEQTSALKSKENNNMASKQPKPPMQKAAPGTTKRIFGYIFQYKWRVALVVVCILVGAAA QAGSSLFLQSLIDTYILPMVGATNPDWMPLLRALTLMACLYAAGIFCSWLWQWIIVAVEQ GTLKKIRDDMFAHQQTLPIRYFDTNEHGDIMSRYTNDTDTLRQAISQSFPQMFSSAVSAL AALVSMLWLSVPVTIFCARIHRNSVRGGAQGRFPFRTLLRQAADRHRRCERIRGRSGQRP EGHQGLQP >gi|222441571|gb|ABXX02000002.1| GENE 232 252181 - 253992 197 603 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 373 581 38 252 329 80 29 1e-13 MTTANATASATPKPKQHVIRTLGKSLREYKKVSLLSPAFVAVESVLEILIPTVMASLIDE GISGGSMPAILKFGLILLICSVVSLTSGFLAGKFSAIAGAGFAKNLRHDQFEKVQGYSFT NIDRFSTGSIITRLTTDVTNLQNAYSMIIRMGVRAPIMVIVAWIFSFRISPSISLVFLAC IPVLAIGLCGLAVLVHPVFERVFHTYDKLNNVVDENLQGIRVVKSYNRESHETEKFNRIS QRIFKDFTKAERIMSFNNPLMMLCVYVSMLLIAWMGARQIVASGNNAALGLTTGDLTALV TYAMQILMAMMMLSMIFVMCIISQASAERICQVLNEESTVTNPANPVKEVKNGDIDFDHV TFRYSATSEKPVLDDIDLKIRSGMTVGIVGGTGSAKSSLVQLVPRLYDVTEGSLKVGGVD VRDYDLEVLRDQVAMVLQKNVLFSGTIAENLRWGNPNATDEEIRHACQLAQADGFIQEFP DKYDTYIEQGGTNVSGGQRQRLCIARALLKKPKILILDDSTSAVDTKTDQLIRTAFHHEI PDTTKIIIAQRVASVQESDMILVMDHGRIMAAGTHEQLLENCDEYRSIYESQTKNQAQPE ELQ >gi|222441571|gb|ABXX02000002.1| GENE 233 254031 - 254744 463 237 aa, chain - ## HITS:1 COG:CAC3413 KEGG:ns NR:ns ## COG: CAC3413 COG1846 # Protein_GI_number: 15896654 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 71 168 45 142 143 62 36.0 5e-10 MYAVTEVTNEQYKEPTGSRLFEVWESGLAKPPSVAIRSLHNVVNRYLRVTRPEAAEDISN GNVDVIVYLARHDNEEIFPQDIEQRFGVTRSTSCRVLGLMEQKGLIAREPVKRDARLKKI VLTDKSRHIAEVLRDNAKNMERILLEGLEDDQIRQFMHVLDVMQTNLVKTGLIGDESRYP SLEIQEQDASKSQVPQESQVPQKTCDDYASNNRDARDEYVSHVLRISQEMAIARNRK >gi|222441571|gb|ABXX02000002.1| GENE 234 254939 - 257185 2898 748 aa, chain - ## HITS:1 COG:YPO2803 KEGG:ns NR:ns ## COG: YPO2803 COG1472 # Protein_GI_number: 16123001 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Yersinia pestis # 5 655 30 705 793 443 39.0 1e-124 MSENTYPSVNDLTLEEKASLTSGGDAWHLQGVEAKGIPGYMITDGPHGLRKSNSATTGEV DLNNSVPATCFPPAAGLSSSWNPELIHQVGEAMAEECIQEKVAVILGPGVNIKRNPLGGR CFEYWSEDPYLAGHEAIGIVAGVQSKGVGTSLKHFAANSQETDRLRISANISQRALREIY FPAFEHIVKEAQPWTIMCAYNCINGVHAAQDRWLLTDVLRDEWGFQGIVMSDWGADHDRV ASLNAGLNLEMPPSYTDDQIVYAARDGRIQPAQLDRMAQGMIDLVNKTRAAMSVENYRFD IEAHDEVAHQAAVESMVLLKNDDAILPVAGDAKVTVIGEFARTPRYQGGGSSHITPTKMT SFLDALTERGVDAKFAPGFTLDLEPADPALEAEAVEAAKGADVVLMFLGLPEAAESEGFD RETLDMPAKQIALLEAVAAENKNVVVVLSNGSVVTVAPWAKNAKGILESWLLGQSGGPAL ADVLFGKVSPSGKLAQTIPFDINDDPSTINWPGEEGHVDYGEGVFVGYRYYDTYNKAVDY PFGFGLSYATFEVSDVKAVKTGACTATVSAVVKNTSNVDAAETVQVYVAPGKADVARPKH ELKGFKKVFLKAGESAEVSFDLDDRAFAYWSEKFNDWHVESGEYAIEVGTSSRDIAGSAV VELDGDGKTQQLTEWSNFMEWRKDPLGSQVLEKLRAEGEAGRMPIVPDNDMTRLFLDSMP INSMSVLMGADGKQIFEYMLAEYAELTK >gi|222441571|gb|ABXX02000002.1| GENE 235 257439 - 258017 640 192 aa, chain + ## HITS:1 COG:no KEGG:BAD_1195 NR:ns ## KEGG: BAD_1195 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 192 14 205 205 380 97.0 1e-104 MANEEVDRRAEILNAAVELFGTLGYYGTSLQKIADRVGLTKAGVLHYVGSKEGLLTAALD EVYDSETEDILTDIVREPRPLIADMWRRIVAVNARRPIQVHMFSTLSAEAIDPNHPAHEY FANHELHNADTALNIRWQVPEGVDTRRLLNAGFAMMDGVQLRWLRTPGQDLNSMWAECED ALFPLPMWEGYR >gi|222441571|gb|ABXX02000002.1| GENE 236 258073 - 259275 812 400 aa, chain + ## HITS:1 COG:CAC2834 KEGG:ns NR:ns ## COG: CAC2834 COG1929 # Protein_GI_number: 15896089 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Clostridium acetobutylicum # 3 378 6 372 380 267 42.0 2e-71 MRILLAPDSFKEAASAEAIAQAMTRGIKRGNPQAECRLMPLSDGGEGLTQALVHATAGTL HNVETVDAIGRPITAQFGFLGNNHASCILRTAVVELASASGLERVSPADRNALSASTFGT GLLIRAAIDAGADRIVLGLGGSATTDGGTGLARALGFRFLDTADHDIPLGGGSLVDLERI DDSEVPNFVKNVPIVLACDVINPLTGPEGAAHVFAPQKGANTAQVELLDQGLANLAHAIM QYNGRDIERIPGTGAAGGTGGGMLGLFNTTVRPGIELMLDLAHGREACAWADVIITGEGS IDSQTPYGKVPSGIAKLAQSQGKPTIAIGGTVTRDPHTIEALNETGIVATFGIAPGPADL ATLIANTERNVEITCAAIAGTLRVASATTVTAATSPCESA >gi|222441571|gb|ABXX02000002.1| GENE 237 259250 - 259528 228 92 aa, chain - ## HITS:1 COG:no KEGG:BDP_1665 NR:ns ## KEGG: BDP_1665 # Name: not_defined # Def: multidrug resistance protein B # Organism: B.dentium # Pathway: not_defined # 3 60 367 424 484 91 81.0 1e-17 MPIVGGSHEWTIAVAYALFMAASGFVLVPDQTHALNQLPSSMNADCSAVMNAIQQLAGTI VLATGGYTALFPIAVVAVLLGTVFIMLIRKVK >gi|222441571|gb|ABXX02000002.1| GENE 238 259601 - 261943 2887 780 aa, chain - ## HITS:1 COG:TM0076 KEGG:ns NR:ns ## COG: TM0076 COG1472 # Protein_GI_number: 15642851 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 13 767 4 747 778 417 36.0 1e-116 MAETTENTVNLPYRNPELPTEERIADLLGRMTLEEKVGQMMQLDARSGDLDDLIVNKHVG SILHTSPSDLPKAVETVNAKTRLGIPLVIGDDCIHGYSFWPGATIFPEQLGMATTWDSEK VQAAGRATAEEVSATGVHWTFSPVLCIARDTRWGRVGETFGEDPYLIGEMASSIVKGYQG GAKAGEPLAKDAILACAKHFAGYSETQGGRDASEADLSHRKLESWFLPPFERVAKEGCGT FMLGYESIEGVPVTFNKWLLSDKLRGAWNYQGTLITDWDNVGRSVWEQKVKPDYVQAAAD AVKSGNDLVMTTPKFYEGAIEAVKTGLLDESLIDAAVARILALKFRLGLFEDPRLPDQKR IDAVIGSEEHQQLNLEVAREAVALLKNDGSLPFNVAGAKRIAVVGPLADDAQTQLGDWAG SSGQINWMPDGHPREMITTVLDGFKQLAPEGCEVVYSRGANIVDLVPDPEGEFYPDGQPR PKIGVSAKIDRALLDEAVENARKSDLIVAVVGDVIQAIGEGCSTATLELLGGQNTLIDAL SNVARETGKPFVVVLVSSKPQVLPASVIGTNGVIVDETPAEGTSALLWAPSPGMKGGQAI AEIILGETEPSGRLPITFPRHAGQLPVYYNQIRGQHGNRYADLTQNPAFAFGEGLSYTTF EYGDPTITNVSESGIFAETDTVHAEITLTNTGDRKGTEVVQLYIGDIVTSYSWTDRELKA FQRVELEPGKSKTVAFDIPVSDCTIVDSEANRIVEPGEFEVLIGRSSRREHLKRTTFTVA >gi|222441571|gb|ABXX02000002.1| GENE 239 262172 - 262435 150 87 aa, chain - ## HITS:1 COG:no KEGG:BAD_1198 NR:ns ## KEGG: BAD_1198 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 6 87 1 82 100 147 96.0 2e-34 MAYLGVSVSKFTVLSVESLNPEHPLHDEFTARMDDIWENYSQYPWLIPPQLGSWKSSMRP VVRKAMEIMDGVQLWWLREPEVDLCKE >gi|222441571|gb|ABXX02000002.1| GENE 240 262537 - 263775 696 412 aa, chain + ## HITS:1 COG:no KEGG:BAD_1199 NR:ns ## KEGG: BAD_1199 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 412 1 412 412 712 99.0 0 MEKPNDIKRDSISVNYFLNTAAYSGLFSLLSVILTGQVSAASSLYVGLALGILSLFSRGS TVFIGSLIERFSTVSLTEAGFGFMVFSLLLLQPAMGGFIGFLFADLALLGLGLSLVNFAL RGHIIATVKDKKIQASLFALVTMAANLGSAIGPLGSNYIYKAFGQTLFIAIIVGLYAFSA LLAPIALTHHVFIRNEKSGEENTSSIVKTITDSLKSPGTVLAILAVFVGSIMNGQLFAGM ALEFHSLSDSPVIRGLFYSIDAISVIALQMPVSKIISRNMTKEHNATSFIVKSLGIYGIS FALFACGVSSCWWICIISLVVFSIAECIYAPLINIALVEAQPDKPLVDILNYRLIIAAIG ESAGSFLGGWIVPALRPAGLTAWYWCALALVGIMPAVVTNQIRKRGQRIIRH >gi|222441571|gb|ABXX02000002.1| GENE 241 263815 - 265002 511 395 aa, chain + ## HITS:1 COG:no KEGG:BAD_1200 NR:ns ## KEGG: BAD_1200 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 395 1 395 395 804 99.0 0 MKVLLLQQPKSFSNYPKWIEEIQERFDCLEVMVFTSNDRAAHHSWPSSVIKEIEVSDYSS DSATAKFFDIVRKFKPDRIVSSSEEDVLRVAEARSLFGIPGLQHELALSCRDKVTMKQSA LDAGLKIIPYTTCQGFGDIISAFDRWETVVLKPRWGAGSAGITILHSKDDLPALATKPEF IRNVHSNQYYLEEYCSGSVYHVDVVYINSGSILISPSRYLVPPLDFEKQNTGSVMLDENG ADYSELLRLTKQLIASFNDQTIPNVMHIEFYKNETGDFVFGEMAARRGGGLIKQELAAAY DIDQSKANFLLELGLVDADANITRSSQYGILLETAGLNWPKEKEIPDWAVLESVGKKKGI AHNSVDSDRKFLISGKNESEIIQRSNYLINSQYNE >gi|222441571|gb|ABXX02000002.1| GENE 242 265137 - 265442 58 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGASIGVYTGSAAGSLTASKWSTSQETSMSLSANFSGTTTIEDKQNEGGRQVTPERMRN THKISGMHPRGARETADSPFRTIPHTSPLPVRAATTAECHP >gi|222441571|gb|ABXX02000002.1| GENE 243 265327 - 265962 622 211 aa, chain - ## HITS:1 COG:no KEGG:BAD_1201 NR:ns ## KEGG: BAD_1201 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 211 1 211 211 424 100.0 1e-117 MAEEETSKRIRKSPQERRAEVLDAAVQLISERGFNGISIQDVADRVGISKQGVLRYVDNK DKMLALVYDEYYGQTGTPEDFFSSGMPGSDPSAPHFPAYLRYLVKHNSRRRMMVQLFTVL SVESLNPDHPLHDEFMGRMEDIWEHYSKYPWVVPPQLGAWAGSMRPVVRKAMEIMDGIQL WWLREPEVDLCEEWSEMENLLFPAPLWDACR >gi|222441571|gb|ABXX02000002.1| GENE 244 266010 - 267209 746 399 aa, chain - ## HITS:1 COG:SPBC1105.05 KEGG:ns NR:ns ## COG: SPBC1105.05 COG2730 # Protein_GI_number: 19113253 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Schizosaccharomyces pombe # 7 265 37 281 407 129 32.0 1e-29 MVLGIDERIDGVNLGNWLVLEKWMDPKPFTRSAEDDEIWMHRTHVSLWSERNLAEELRRH RETYITLEDFRIIADHGINLVRIPIPYFIFGDWPGHPGCITYLDRAFRWARETGLKIMID LHTVPGSQNGFDNGGLTGVCKWAQNTDLVEYTLNVLERLARRYRDEPALHGIEVLNEPVS WSVFHSTSNTAKDSHEASGSTYVSLRFLKRFYRDAYARLRAVLRPETVIVFHDGFRLLRW GGWFRRAGMRNVMLDTHQYLIAMEDPLFSGPARRLYLRSRRLPWLYRMLVGASGIAIRSA ARRIPVLVGEWCVENQWALHSQNRSAAYRQVSRLQRAAWDVSAGQIYWSYQLARSAKPGS GEGKPPRDPRNGGNLEAWDLTRVWRHGWIRADTSHDDVP >gi|222441571|gb|ABXX02000002.1| GENE 245 267432 - 269078 1884 548 aa, chain - ## HITS:1 COG:BH3683 KEGG:ns NR:ns ## COG: BH3683 COG3507 # Protein_GI_number: 15616245 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Bacillus halodurans # 2 540 5 524 528 443 43.0 1e-124 MLHNPIFKGFNPDPAICRKGDDYYVAVSTFEWFPGIPIYHSKDMKHWELLTHVLTDDTKP NLTKLPSAKGIWAPCLTYCEEEDMFYVIYGVMNSMNARYFDVNNYLIKSKSIEGPWSEPV YLTSSGFDASILHDDNGKKYIVSLEWETREGYEKPGVICCVEYDPETKHVVGYPKRIWRG ATDRGCIEAPHLTKRDGWYYIMCAEGGTGYNHAVTMGRSRNVWGPYEPDPNGPLVTSQPK ESNERADDDHLKPRYFNPDSVLQKSGHGSYVDLPNGETYLVHLTSRPFVPELRCTLGRET AIQKMTWTNDGWLRMADGSNLAKLEVEEPDLPDAPMPEIPGHDDFDGGAIGNWYYSPRQM PTTFANVTERPGWLRIRGEESLASLNRTSLIARKLTSVYATVTTKMEFEPEVYQHSAGLT IYYDNMNNIFLRKYYSQTLGGSAISIVRLENGEKTEMLDTRVAVEDKPIYFRLNIEGRRT WFEWGYDGENWTKIGPDFDTTTFSDEYCKYGEFTGTMVGIAVTDAALHEKTADFDFFDYE ADETKPVD >gi|222441571|gb|ABXX02000002.1| GENE 246 269141 - 270349 1492 402 aa, chain - ## HITS:1 COG:SPBC1105.05 KEGG:ns NR:ns ## COG: SPBC1105.05 COG2730 # Protein_GI_number: 19113253 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Schizosaccharomyces pombe # 6 399 39 394 407 146 29.0 9e-35 MDLNYIKGVNLGNWLVLEKWMNPALFDGTTADDEYYLPTQLDPAVYEARIRTHRAEYINE RDFATIKSWGLNSVRIPVPYFIFGDRAPFIGCIDELDKAFNWAEKYGLTILIDLHTAPMS QNGFDNGGISGVCKWAQLPDEVEFVLSVLERLSKRYGHRRALMGIEIINEPNTTTCWPMA NVTERYKAVDPELAEGTGPIAFDWLKNFYITAYHRLRDADKGALPTDKVVVFHDGFDIEQ WKDFMRGPDGKLAPEFKNVVLDTHQYLMTAETMGCPQTAEGYDDFVRNTYAPMIAEMSEY FPVIVGEWCLFNSVGCGVDTHGGQSVLNGEEGAQVETLTAEQKRSLYRGLAESQLAAWSK GSGFYYWNYKLLTDTVNTPGWIGWDAWDLGRCIAQNWFPVQK >gi|222441571|gb|ABXX02000002.1| GENE 247 270623 - 272179 1479 518 aa, chain - ## HITS:1 COG:BH1874 KEGG:ns NR:ns ## COG: BH1874 COG3534 # Protein_GI_number: 15614437 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Bacillus halodurans # 12 516 14 497 498 298 35.0 1e-80 MVVCIDPNSTIGRIDPKLHGQFIEFLGECIDEGLWVGEDSPIENEHGYRKATLDALRALQ PPVIRWPGGCYADTYHWRDGVGPQSERKTTFNENFATYELDDHSFGTDEFLRLCEMLGAE PWININMLSGTVAEMKDWMEYCNREQPTDLAKERETNGHKAPYGVKYWGIGNEVWAGGGT MTPQTYLDEYRRFASAMPSFTTDVFAPTEMYAIASGPDGNKPRERVQWTQDFFRGLVEYR QPKIDGYDLHFYNWNVDNDADTPTEFDEDGWNTVIEGCLELEDILCDQWRLMNDGLALIH EPEVAMDSKLSHVDLIIGEWGNWHKTAFFARPALKQQVTMRDAITTALTLDLLQRNCDKV SMACNAQTINVLNSLILTEGDRTILTPNYDVFMMYRAHRGMIALDVNRNDSEDSAVYTFA SRNEDGTQLLINLTNAHMNDGAEVRLHLPCGAQVDSMETLASEDPHDCNTVEHSDLVRTH AVDVDSAVSVHESAGGAELTVTLPAASVSALHVTIRQR >gi|222441571|gb|ABXX02000002.1| GENE 248 272335 - 273591 1695 418 aa, chain - ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 18 418 14 418 418 127 27.0 5e-29 MTGAQSAESTRTLSKIDKTRFCVAFFVFSFAWMLALQIVAAVLLPQRLADIAPDSKDAIF GVLNSATALASLISNLVVGNMSDRTRSIFGRRTPWIASGGIVAGISLFLIGILPDGVSIG VSYCISMVGLNMMIAPVIASLSDRVPEDMRGTMSAFISAGTLFGSALGQIVGAQFITLQL PGFIVAGAAMALSGVLAVIFWPKEKSSKDMPKEKVDFKGIIMSFRPPTKGARDFWLAFAG RSLLLFSYYMILNYQLYILQDYIGQSVEDSAVTISTMSLVLMVVSLISALSAGPISDKIG RRKIPVVAASVLLAIGYALPWLMHNALGMILFSAIGGFGYGMYGSVDQALNVDVLPNEEE AGKDLGILNIATTLGQMVGPIVTSAIVVATGSYAMVFPTAIVMVALACVFILMIKKVK >gi|222441571|gb|ABXX02000002.1| GENE 249 273853 - 274539 596 228 aa, chain + ## HITS:1 COG:no KEGG:BAD_1207 NR:ns ## KEGG: BAD_1207 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 228 16 244 244 406 90.0 1e-112 MESQEKTSANSIKSRPINQRKRLSPTQRRKQVAQEAVTLITQYGSYGFPMQALADAVGMT LPGLNHYVKNREELLSLVIETFYDSEESNAPTTLGATINHCDQSDSATKECRHLPSALHE TVCFNAKRPELVALFMRLAIEASDPQHPAHEFYQNRHGSILTDMTSVDWELPEEYRDPER LHDLIVTAFFAMDGVQIQSLTNPNESMMQLWERAERILFPSPTWDGYR >gi|222441571|gb|ABXX02000002.1| GENE 250 274771 - 276114 1516 447 aa, chain - ## HITS:1 COG:CC1757 KEGG:ns NR:ns ## COG: CC1757 COG5520 # Protein_GI_number: 16126001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: O-Glycosyl hydrolase # Organism: Caulobacter vibrioides # 1 445 25 468 469 163 27.0 7e-40 MTTWIATTQDNKLADKSSEIESTHATSAADLQLDGNEYQALRGFGGCFNELGWLPLQTVI EEERDQIIKELFSPDEMNFTFNRAPVGANDFADHWYSYNETDGDYEMEHFSVEHDEQTLI PYIHRAQEWQPNMQLFSSPWSPPTWMKRPKAYNYGRLVQTPENLKAYAKYFVKYIQAYAE HGITVNQLHVQNEVFADQKFPSALWDAEALKVFIRDYLGPAFEEAGLDTDIWLGTLNGPE DMAWTGGYGMKLNNYNRFVDNILFDDGARKYIKGIAYQWAGQNCIARTHESWPEIELIQS ESECGMGDNTWEYAEYIFHLINHYLRNGATAYTYWNMILDDQDSTWGWWQNSLFTITADT HEVRRNPEYYVMRHFSHFVKPGAHVLGTTGHFNSMAIAFRNPDGTIVVVAQNALEEERPF EFADPCNADRGIKVTLAPRSFNTFVLD >gi|222441571|gb|ABXX02000002.1| GENE 251 276484 - 277809 1908 441 aa, chain - ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 72 441 45 418 418 121 29.0 2e-27 MSEAIASKEERLVRYNANIAAADKDPQLSPETGKPLSKVNTIRFGAGFLLFGVLWMSGLG IVSAVLLPMHYKTIEGADPDALVGIVNAFTAVASLVANLMFGNFSDRSRSRFGRRTPWIV FGAVLGGVTLFLTGTTHNAVLLTIFYCACMFGLNCMIAPLVAVLSDRVPSGIRGTMSAFY GAGSTIGAPIGTMIGAFFIENLTVGFAVAGVLMFLGGIVAVIILPKERSADFLPKEEGSF KDILVSFRPPKFAGAHDFYKAFAGRFCMLMSYQMINVYQLYIIQNYIGQSVKESAVTVSV VSMIMMVMSLVGSFISGPVSDLIGRRKVPVVVASVLFAIGIAMPWLIPSTLGMYLFAGIA GLGYAVYYAVDQALLVDVLPNKEEAGKDLGILNMGTTLGQMCGPVVMSTIVVSLGYNFAF PTAIALAIIGCFFIMAIKKVK >gi|222441571|gb|ABXX02000002.1| GENE 252 278167 - 278793 741 208 aa, chain + ## HITS:1 COG:no KEGG:BAD_1210 NR:ns ## KEGG: BAD_1210 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 208 1 208 208 402 98.0 1e-111 MRRHIESKTKKRMSAEDRKKAILETTVSFISQFGFWGFTIRDVAQAQNITEAGLLYYFKS KEQLLEATLKYADRTNQIAIAEHLGVEGVTGEVLQDGIAYHCDLGLKAISTGTVETNAGR PEMVRLYTLLESEALSKDHPVHEYFEQREINLLKEYTFAAKRDGVVDPERTALQVLSAME GLQLRWLNESHDIDFVGEWKALIGLLIP >gi|222441571|gb|ABXX02000002.1| GENE 253 278827 - 280953 2482 708 aa, chain - ## HITS:1 COG:TM1195 KEGG:ns NR:ns ## COG: TM1195 COG1874 # Protein_GI_number: 15643951 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Thermotoga maritima # 10 664 1 632 649 214 27.0 6e-55 MGRYEADHILFGAAYYDEYLMMKGIDRVDEDMRMMKEAGLNVIRIAESTWSTCEPQPGAF DFTYVDRALDAAQRVGIDVIVGTPTYAVPSWLVKIDPSVLAVTPNGEGKYGARQIMDIVN ATYRFYGERVIRKLISHVADHPAVIGYQVDNETKYYDSVSNDMQRLFVKYLHEKFHGDLN ELNHHFGLDYWSNRIDSWEDFPDVTATINESLGGEFDKFRRDQVRAFLQWQADIVREYAH DDQFITHNFDFEWRGYSYGVQPAVDHFKAATAVDITGVDIYHPTEDDLTGKEIAFGGDMT RSTKNGQNYLVLETEAQGQHGWVPFPGQLRLQAYSHLASGADMVEYWHWHSIHNSFETYW KGLLSHDLEPNPTYCEAGVFGREIAKPEVGERLVHLKKHNKVAIMVSNESLTALDWFLIE AGFPFGGTLKYNDVVRNVYDALFELNVECDFVPSDAPAERLAKYEMIVTPALYCASQETT DRLRAFVENGGHLVSTMRSFVTDDEVTVWHDRAPHNLTDVFGMTYNQFTRPNGHVSVEFA GALAETASTDAQSLIELLNADADTEVLASYGHYAWKDYAAVTRHAFGKGDAEWVATLLDA DSIRAVMREAVEHAGVEGAGTALAGQVAVRQGVNARGENVTYLLNYSADEVTVASPIEGE VVVAPVVIATDGSIDEVANAEVVLKEGAAVKQGDPLTIGRWNVAVIAG >gi|222441571|gb|ABXX02000002.1| GENE 254 281416 - 282045 660 209 aa, chain - ## HITS:1 COG:no KEGG:BAD_1212 NR:ns ## KEGG: BAD_1212 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 209 1 209 209 370 85.0 1e-101 MGNEGKKRVRKSPEERKKEIIAAASRLIGEKGYYGTSLKDIADAIGMSQPGLLHYIGNKE RLLSLLVTDNYDQEGTPADFAKSGLPGSDPEGMLFPAYLRFLVRYNESRRSLLQLYMVLE TESFSEGHPLHDYFENRPKYVWEHYSQYTWKLPPEIGGWENMRAIVRQSLEAMDGIQLRW TRKPPIDFYDEWLAFEKMIFPSPVWDSYR >gi|222441571|gb|ABXX02000002.1| GENE 255 282203 - 283474 1431 423 aa, chain - ## HITS:1 COG:CC3414 KEGG:ns NR:ns ## COG: CC3414 COG3572 # Protein_GI_number: 16127644 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Caulobacter vibrioides # 20 354 14 342 453 147 29.0 6e-35 MTTPRISYAHLLTEPNPKHVESLVKFFESGCQERGTGGFGVEIEHLPVHNSDDTAVNYYE ENGIEALLNRIRPYYDESKEYWENGRLVGLGREGISVSLEPGGQLECSLGILHKPEDLCT IYGAFRREVDPVLDDLGFRLVNYGYQPKSGYADIPVNPKDRYKAMTAYLGRVGQFGPCMM RCSASTQVSIDYVSEQDAISKLRLGTVVGPILAWFFRNTPYFEGQENPYPLLRQRMWDYL DLQRTNVIPGLFDPRFGWEDYAVDVLSTPMMFADLTHTPEALETPGTDLHHPAFYENAND VYPDRELNAYEINHVISTHFNDVRLKNFIEFRHWDSLPVARAERLTEIIGSLFYDPTNRE RLESYFDGIREEDVFEAKANLQARGHQAAPYGNSLEFWQEFLGLEGVLADEPGDPKHPDV FQK >gi|222441571|gb|ABXX02000002.1| GENE 256 283799 - 287683 4442 1294 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 6 431 258 663 663 422 49.0 1e-117 MVTTLTKHYEARTCADLLARLDELENLPSNTPTMPPLFATEADRTAFNERHHREHIHQGT LEGAQGPHFLGIDAGSTTIKATLVNDDREIVWSSYATNEGSPLTAAVQIVKKIQAELPEG AWIARSCATGYGEGLITTGLHLDEGVVETMAHYRGAEMVSPGVTAVIDIGGQDMKYLAIN DGVIDSIAVNEACSSGCGSFLQTFAISMGLTIQEFTQAALNSTHPVDLGSRCTVFMNSSV KQAQKEGASIEDIAAGLCYSVVRNALYKVIKLRDSGELGDTVVVQGGTFLNDAVLRAFEL LTDREVTRPNIAGLMGAYGAALTARMHYADEAEDEDVDTTDTKEAVIAGVCHTASNILSG EELDNLSMTSERDVCKLCQNHCKLTITTFQDGSRYVTGNRCERGGDAKKKRSDRPNLYDY KYKRCFAYRRLTDKNATRGEIGIPRVLNMYENYPFWFTLLTSLGFKVMISGRSSHELFET GIESIASENICYPAKLVHGHIKWLLSKGVKTIFYPCVSYEENLVPNTDNHYNCPVVANYP VVIGANMPELREEGIRYMRPYFNMANHELMVDRIVEEFAWANVTREEAETAVKAAYAENE VFKHDVQMEGLKALAYMKEHDCRGIVLAGRPYHIDPEVNHGIPETICSLGMVVLSEDSIC ELQPGEKLNLSDFLAADEDDPRKKNADGFRHVEDRKVTKMPLRVTNQWAYHARLYSAANF VASYPGLELVQLNSFGCGLDAITTDQVGEILADKADVYTMLKIDEVSNLGAAKIRLRSLK AAVEERERNKQRGIAAVMPNKQDSAPNKQGEFRKTGSEAPTPGRQVMLDTVMKANPKLTE AVKAASKRAAENGVGEAKKSAHNSATMSKYANRVPFGKDMKDYTIVAPQMSPIHFSLVES VIRSGGYKFDILEHASRENVETGLKYVNNDACYPAIMVIGQLVDAILDGKYDPEHTALAI TQTGGMCRATNYFGLIRKALIDAGYPQIPVIAISTQGIEDNPGFKATPALLHRVIKALII GDLLMKCLYRVRPYEVTPGSANQLYKTWNTIVRETLENHGRSKTASKFIGKGYLPYSTLV KEIVKSFDSLPLKDEPRKVRVGVVGEILVKYQPDANNHVVDVIESQNCEAVVPGIMEFMT TRPYISDWNEHYLGMGGNKLGYALMRKALDLYNAPVRKAIDLAHGKFSQDLPMPELVKKA DEVTSVGVQAGEGWLLTAEILELIESGCPNVICAQPFACLPNHVTGRGMFGKIRRLHPEA NIVSIDYDPGASEANQLNRIKLMIAAAKKAHKAA >gi|222441571|gb|ABXX02000002.1| GENE 257 287664 - 288521 931 285 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 17 277 5 258 663 295 54.0 1e-79 MVEAAEAVTETHGTKPLRVGLDIGSTTVKAVVLDQSDALMDALFSDYRRHHANVRATVAG LLADIHQELEKLGRGDEPIRLAITGSGGLALADSLDVPFVQEVIAETEAIDKEYPQADVI IELGGEDAKITYLKPTPEQRMNGSCAGGTGAFIDQMATLLDTDAAGLNEMATQYETLYPI ASRCGVFAKTDLQPLINDGAAKPDLAASIFTAVATQTIAGLASGRPIHGTVIFLGGPLFF MSELRAAFKRALDGKVDEFIVPTDAHLYVAYGAALQADQDGDDLD >gi|222441571|gb|ABXX02000002.1| GENE 258 288770 - 289483 579 237 aa, chain - ## HITS:1 COG:SP0205 KEGG:ns NR:ns ## COG: SP0205 COG0602 # Protein_GI_number: 15900141 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pneumoniae TIGR4 # 31 216 2 185 196 241 63.0 1e-63 MISSANPAIQRRDFAADETNRGPFIPTTRSNNPKAGQWTNRMSRNMIADYKRFLMTDGEG IRCSLYVSGCPFHCEECYNTSIWDFQAGHEYNDKLEAQIMDDLSQSYVQGITFLGGEPLL NTGVLLPLARKIRERFGNTKDIWCWTGYTWEELMREGESPDKRELLELIDILVDGRYIKE LHDSLLQFRGSSNQRIIDVPKSLESGQVVIWPKLHDQTRFIPEIYGKDRSAGEGSAS >gi|222441571|gb|ABXX02000002.1| GENE 259 289618 - 292017 3133 799 aa, chain - ## HITS:1 COG:L70400 KEGG:ns NR:ns ## COG: L70400 COG1328 # Protein_GI_number: 15672255 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Lactococcus lactis # 22 790 17 729 747 876 56.0 0 METQALDAVSATVKTGTGKVLVEKRDGRVVDFDPINIISAVKSAFADLDKKIGPQEEQLI RDIANQVEAEIKDRYNGPAKIEDIQNLVEHGLIEDHLYDVARTYTNYRLNKDIERAKATD INEAVKRLVNRDEALVRENANKDSNVYSTQRDLLAGAVSKAAAFSMMPDAVSNAHMKGDI HFHDADYSPFTAQSNCSLPNYWDMLANGFTLGNAPMGSPNSISIAATQITQIMKDVASSQ YGGQTANRADENFVEYARKDYDKFLEQAHEIMPDDLPIEIAERQVRLAKDVEPKRLHFEK DRPALPMDEPFNKDASRLQQLREVWAKIQTRKAIYDAMQTMEYQINSNRVSNGQTPFVTV GFGLGTDWFAREIQRAIFLNRIRGLGSEHHTAIFPKLVFTIKHGVNADPGDPNYDLKQLA LECATKRMYPDVIFYENIVKITGSFKAPMGCRSFLQGWIDPATGKDVEDGRMNLGVVTVN VPRIALESHGDKDRFWKIFDERMAVAHQALQFRIMRCKQAAPVNAPTLFRFGAFGRLGAN DSVDQLFRNERATVSLGYIGLYEATSVFYGKNWMRDHGWDPQGKEFALSIVKRMNELCKE WSDAEGYHYSVYSTPAESLTDRFNRMDHEKFGEVEGVTDHDFYTNSFHYPVWLQPTPMEK LNYEKDFPYYASGGFINYCEFPCLQSNPKALEAVWDYAYNIGIGYLGTNTPIDRCYDCGF QGDFEPTEEGFKCPECGNSDPDHCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHMSGE TGHVTLSDGSEREWFEEAK >gi|222441571|gb|ABXX02000002.1| GENE 260 292018 - 292221 65 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKSLPLSHKLRNGGIKPKNGIYSFTAGVPLLHLVLAMAYSHGRSNNLACITKHENLVGW GPTRKGR >gi|222441571|gb|ABXX02000002.1| GENE 261 292342 - 293622 1265 426 aa, chain + ## HITS:1 COG:Cgl0996 KEGG:ns NR:ns ## COG: Cgl0996 COG1570 # Protein_GI_number: 19552246 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Corynebacterium glutamicum # 21 418 5 408 417 254 39.0 2e-67 MTWNQDYTPPAAQPNSKPLPRLAGETTADNPWPVSLLSEKFHMAVERWPSVWVAGQITQI NTRRQGSAYITLRDDYQDIALEVNGFGQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLR GDAIIAAGAGGSLKAMIDELRKKLKGEGLFDADRKQPLPEFPHCIGLICAPQARAEGDVI TNVRLRWPVVDFKVTHVHVQGEQCPSDVIKAIAQMDADPDVDVIIVARGGGAFEDLIGFS DEGVVRAAAAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVREQMQLINVN IERMRMRIDATVNNETRLIEGYANRPSLTQPLTMLEPHQRLIDDARTRMRIGLTRILDDA SLTIEKAHASLTALSPQSTLNRGYAVVQGADGHVIDDANAVNTGDQLTMTLKHGVIVSEV TTVTKE >gi|222441571|gb|ABXX02000002.1| GENE 262 293625 - 293909 534 94 aa, chain + ## HITS:1 COG:no KEGG:BDP_1698 NR:ns ## KEGG: BDP_1698 # Name: xseB # Def: exodeoxyribonuclease VII small subunit XseB (EC:3.1.11.6) # Organism: B.dentium # Pathway: Mismatch repair [PATH:bde03430] # 5 94 6 95 95 106 94.0 3e-22 MINETTPASSLTDKEREAIAQMPYEEARDQLIQAVQALEAGGLNLDQSMRQWELGEALAK RAQSLLGEVRAKLDAAQAEQATAANTAGTQDNLA >gi|222441571|gb|ABXX02000002.1| GENE 263 294175 - 295260 789 361 aa, chain - ## HITS:1 COG:no KEGG:BAD_1219 NR:ns ## KEGG: BAD_1219 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 4 358 26 380 382 525 73.0 1e-147 MGGAKPRTAQGKAVKPVRTLKKAKSHRVRNIICGFLAGILSIAALLGTVSHILPAEIQAW PYVPIIVSLVPWFAILAVIALICGIVSKRTMSVLLAIAAIALQVWWQYPFFYNETKLPRA AIAAVSGASANTQDDYARLMTCNVFKGRADAQEIVDVVRSERVEVLALQETTDAFVDELN KAGIGDLLPYAQVASSDGVYGNGLWSAGPLVDPADDDVDSSASFMPGATVAFNDGQTQIR FVSVHTTSPTDGYWQQWKRSLDELGRLRYDTSRRYVFMGDFNATDDHAPFRNFLGTRFAD AAKQAAGGLVFTWPANIDYVPTFAGIDHIVLDSGMLAGRVKSLKIDGSDHKALLATVQFD V >gi|222441571|gb|ABXX02000002.1| GENE 264 295729 - 296454 533 241 aa, chain + ## HITS:1 COG:no KEGG:BAD_1222 NR:ns ## KEGG: BAD_1222 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 241 1 241 242 350 76.0 4e-95 MTIASCGSVSAITLGLPNSTAISSEKATLPKGLFVAKVPVSAKTKQRLATEVESITMLSL LRPQNTSLAAGNRIPEILVLGLRLHGKNASVPTDVVELIAMQRKSGMLFACVRDAEIDGT VQKECAFAVRRALPGRAGHTPTFKVFASAWVPADEALLDISDPAVDSMDTLWESLCAQVI LGDSSPAEVDARMVRNAQIAQLKADIDKLTRDHQRVKNSAQRNEIFAKLHKAKKQLEELQ G >gi|222441571|gb|ABXX02000002.1| GENE 265 296489 - 297460 953 323 aa, chain - ## HITS:1 COG:MT0516 KEGG:ns NR:ns ## COG: MT0516 COG0248 # Protein_GI_number: 15839888 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 10 314 2 305 344 235 45.0 8e-62 MVSLHSHATRLGVLDIGSNTVHMLIVDAAPGARPEPEASAKSTVRLMQYLKEDGTIKKAG VEAVISAVEKAMELAKEYEITQLLVLATSALREAPNGGKILRRIEDAIGQPVTVLSGVDE ARLTFLAARRWYGWDAGRLLVIDIGGGSLEVAMGSDEDPTVALSVPAGAGRITREFLPEN GIASEKDLENARRNIRKILDPMVEAFPKSKHPMHAVGTSKTIRSLARLAGAVMRQPGRVD TSIMTLDQLEDWLPRLAAISPDQRVALPGVTPERTYQIVGGGLVVDEIMKALDVKEIEIC PWALREGAILRWLDQFGRTRLGF >gi|222441571|gb|ABXX02000002.1| GENE 266 297697 - 298902 1307 401 aa, chain - ## HITS:1 COG:PA4722 KEGG:ns NR:ns ## COG: PA4722 COG0436 # Protein_GI_number: 15599916 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pseudomonas aeruginosa # 13 393 6 382 390 290 44.0 3e-78 MGNAENSALPQMSHRAQIANPFRAMVFGAMADEMIAAGTDVVKLSLGEPDFGAPLAVRDA MREQYDGRPLPYTAAMGLPELRQAISDFYKERHHVDVDPKRIAITAGGSTALLLAAALTV NEGDEVLIADPSYPCNRELVRAFGGKVVDVPTNATTRFHLTPELCHEYWSDRTKAVMITS PSNPTGTTIAFDTLKSVCDLAKERGAWRIVDETYLDLADREPDGSDVKSVLACDPDAIVC SSFSKFFGMTGWRLGWMVVPECALEAMDDLATNFFLCAHTPTQHAALACFTPETLAVCEE RRQELLERRRIVVDGLAEIGLPLEVEPNGAFYAYFNISSTGLDAWTFCERALKEAHVALT PGRDFGEATADTHVRLSYAASREALREGLRRLGDFVDKLRG >gi|222441571|gb|ABXX02000002.1| GENE 267 299070 - 299462 383 130 aa, chain - ## HITS:1 COG:NMA0429 KEGG:ns NR:ns ## COG: NMA0429 COG3727 # Protein_GI_number: 15793434 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Neisseria meningitidis Z2491 # 1 124 14 136 140 135 55.0 1e-32 MSHIRGKDTSIEMMVRSFLFSKGLRFRKNDKRYPGHPDVVLPKYRTMVFVNGCFWHMHEN CPKATRVPKSNVEFWSAKLLRNHERDVRQHAELETMGWKVIVVWECELAKKVREERLERL YHEIVGTQPA >gi|222441571|gb|ABXX02000002.1| GENE 268 299737 - 300741 1149 334 aa, chain + ## HITS:1 COG:CAC1480 KEGG:ns NR:ns ## COG: CAC1480 COG0673 # Protein_GI_number: 15894759 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 1 326 1 320 320 199 33.0 7e-51 MARIRVAILGAGRIAQHMADTLVKMAEDVRYADLVEPYAVAARNAVRAADFAAKYGFPVS YGSYEELVADPNVDLVYIATPHNLHAEQAILCMKAGKGVLVEKAFGANAAQTREMLAVAK ETGMLCAEAIWTRYMPSRAIIDKILASGAIGEIQAIDANLCYPTTAKARITDPALAGGAL LDVGVYPINFIDMIMHNAPIARIESSMRAYETGVDAHNSMTFYYENGVMATAQSSILCHS DRTGSVWGTDGYMVCQNINNVEAIDVYDGNHTVVAHYDVPAQLTGYEYEVAAAAQAVIDG RTECEEMPHADTLRIMELMDSLRRDWNLTYPFER >gi|222441571|gb|ABXX02000002.1| GENE 269 300856 - 302916 1598 686 aa, chain + ## HITS:1 COG:YPO1440 KEGG:ns NR:ns ## COG: YPO1440 COG0210 # Protein_GI_number: 16121718 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Yersinia pestis # 110 632 179 650 661 221 31.0 3e-57 MGLLSKFMNALIGEPPVSKTATQPGPKLARQNVPNPTQQQTTQRKSTVQSRQTQQLTQPS QSSQLARSSYRAQTQTTARNTSVTTNRSRAQSHANSQPAQKLMPQPMLPAEQIERARNII GKIEKHELSDEQISAIAGAGHNTLVLAGAGTGKTTTIVGYIAWLLNTGTATPEEILVLSF TKASADEMSSRITQSTGKVIRACTFHSLGLEICRSSTIANRPIIDGHTSNNVVRNAFEYL LEHNVSYRLLAFKLMSQQLLDKYSTAARLENFQLPTDDYAFNQYRQNLIDTTQTIIQHMR SNNIDIAGMQTLNERYGGKNIGRNREMLQLIEPLYHAYIQNFKTNNGIDFPGMIVDAISC VNNGSYRHPYKYVLIDEYQDMSRPRYELIRALRLQHDFSLFCVGDDWQSIYRFAGSDIHL ILDFDRIWRAWGPTFMFQITTTRRFRQSLIDASGAFVMRDTNLYVKHLNNPSDKKDYSLK ALGGHTEEERFNVIVEQLRKLPKTASVLLLGRYRSDINLMIRCDQEGLFSIDQSTGNIRF LEKPDMDIRFMTAHASKGLQRDFVFLLCCSGGLKGFPSTIPEEPLLGLLLPEVERCPHAE ERRLFYVAMTRCKKKLFFIVDQTRPSRFMYELHSKICPNIFRGVKLPPQCPNCGEALSLR HNRNDPNRSFYGCTGFPNCRYTQQAK >gi|222441571|gb|ABXX02000002.1| GENE 270 303081 - 303236 216 51 aa, chain + ## HITS:1 COG:SA2278 KEGG:ns NR:ns ## COG: SA2278 COG0494 # Protein_GI_number: 15928069 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Staphylococcus aureus N315 # 3 46 2 45 130 58 59.0 2e-09 MSRKIINVVGAAIIKDGEVLCARRGEGKSLAGYWEFPGGKIELHESASLHR >gi|222441571|gb|ABXX02000002.1| GENE 271 303307 - 303519 184 70 aa, chain + ## HITS:1 COG:MA1603_2 KEGG:ns NR:ns ## COG: MA1603_2 COG1061 # Protein_GI_number: 20090461 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Methanosarcina acetivorans str.C2A # 1 58 130 187 618 79 56.0 1e-15 MSRPEILAQFSKDDFDYILIDEVHHAAADSYKRIIDYFTPDFMLGMTATPERTDGANICD VLPPPDRFAV >gi|222441571|gb|ABXX02000002.1| GENE 272 303606 - 304724 1118 372 aa, chain - ## HITS:1 COG:DR0666 KEGG:ns NR:ns ## COG: DR0666 COG0675 # Protein_GI_number: 15805693 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 5 365 3 371 408 236 38.0 5e-62 MQVTRHCAVTYRIYPDKAQAGLIDRTIGCARLVYNLMLETRIDTYNRTGKSCNPTPAQYK DEYPFLREVDSLALCNAQLNVAKAYNNFFRDPKHVGFPKYKAKHRSAWRYTTNNNNRNIR LIEGGRYLKLPKVGVMRARQHKTIPDDWKLKSATVEHLKSGGYTATILFEYETQAPEPVR PVHIVGLDYASHGLYVSSDGEQADYPRFYRQMEPRLMREQRRLSHMVKGSGNWVKQKRRI AKLAAKVRNQRADFLHKTANRLAARYDCVGVEDLDMKDMSQSLALGKSTMDNGYGMFRTM LAYKLERQGKQLVTVDRFYPSSQLCSDCGYRNKDTKNLYIREWTCPDCGVWHDRDVNAAT NIMHETRRLVQE >gi|222441571|gb|ABXX02000002.1| GENE 273 304735 - 305133 487 132 aa, chain - ## HITS:1 COG:Z5815 KEGG:ns NR:ns ## COG: Z5815 COG1943 # Protein_GI_number: 15804795 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 2 129 6 134 138 93 35.0 9e-20 MELESNHHSVFLLHYHLVLVVKYRRKVFDDIVSARAREIFEYIAPKYGITVEEWNHDMDH VHVLFRAQPKSELSKFINAYKSASSRLLKQEFPQIRQKLWKEYFWSRSFCLLTTGGAPIE VVRRYIENQGRR >gi|222441571|gb|ABXX02000002.1| GENE 274 305238 - 305831 347 197 aa, chain + ## HITS:1 COG:MA1603_2 KEGG:ns NR:ns ## COG: MA1603_2 COG1061 # Protein_GI_number: 20090461 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Methanosarcina acetivorans str.C2A # 6 143 189 306 618 108 42.0 7e-24 MAKSVELFGNNVAYEIRLQQALEEDMLCPSHYYGVGEYISKFMGQQVSADSMTDKDRTEF SRWLEQLTDPNRVRYIIDKIQIYSEAGTDVRGLVFCSRRDEAKRLSAMFNEQVNQQVERP YRTKAITGENSQAERDEAVKQLKMANLTISSPLIYSMKVWIFLISTKLLCFVKRSRALFS HSSSAEVYVRQAVKIRL >gi|222441571|gb|ABXX02000002.1| GENE 275 305744 - 307204 856 486 aa, chain + ## HITS:1 COG:Cgl1126_2 KEGG:ns NR:ns ## COG: Cgl1126_2 COG1061 # Protein_GI_number: 19552376 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 1 485 338 786 789 204 30.0 4e-52 MLRQTQSSIIFTQQLGRGLRKASGKDSVVVIDFIGNYANNYLIPIALYGNTGDRDVARKN LQRESIGISSISFDKIARERVLASLDTADLSDMKLLSKQYQQMRYELGRIPMLMDFAHRD ASLVFTLASKNNDYLSFVVSREKSLSRGKHASASYVEQLEPVSNAQSGVLKMLTATQLRG LRPHESLILAVLCDLDWRRINPDCSDDDASLFERFSTQHSLSLFDLQTLLSTLFPYVDNN IQQCGSAFSTLNYSYFTSANRTRFGNTSLVCMCDNESYALTQECESMLHHATFRTFFTDT IEASLFNALALSREARKRRIMPDHGFIYGEKYSLADVMRLCAWKDEQIPQNVGGYKLDTD TNSLPIFIKYEASQYGDRFLNPGEIEWFSKNNRSLQSLEFKWLLDGTEHTSEWKNRHFVP IFIRRKAEEKEKSYYYVGSAVAVDDAHESVNIADDGTQSKVVISTLKLAKPVDPELYRHL TGNPAF >gi|222441571|gb|ABXX02000002.1| GENE 276 307405 - 307542 83 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFLQNKKNTLNVTFYNVIFKTCNHCNINDSQHHQLQKQYFPRYHS >gi|222441571|gb|ABXX02000002.1| GENE 277 307704 - 308126 826 140 aa, chain + ## HITS:1 COG:no KEGG:BDP_1719 NR:ns ## KEGG: BDP_1719 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 140 1 140 140 258 94.0 5e-68 MADEKTVINVDLNMFGQDADAKTAAANEVAKSLGISDEALAQVEEFKAALTAHNAWDLPF MGYVNEDGYGYAYVPDAAITMNPYWDAHKEFMNLPEDVQTAFAIRMLFTHRPVDRYGADM FLHYHRGFQVNFVGSGANKY >gi|222441571|gb|ABXX02000002.1| GENE 278 308290 - 308721 589 143 aa, chain - ## HITS:1 COG:no KEGG:BDP_1664 NR:ns ## KEGG: BDP_1664 # Name: araG # Def: argininosuccinate synthase # Organism: B.dentium # Pathway: not_defined # 1 140 1 142 149 255 88.0 5e-67 MKVASGNVLWRQRKRNWCRTPFTFTVYMLTDQEMSIKTGILNEKFNLIKLFRIVDISVER TFLQRLFGLSTLVLDTRDQSSGNGVVVLKNVVHGFEVRRVMQEAVDSSRKENGMSAREFL GGPGGPGPEGPGMGFDAPDMGDL >gi|222441571|gb|ABXX02000002.1| GENE 279 309056 - 310363 1391 435 aa, chain + ## HITS:1 COG:no KEGG:BDP_1720 NR:ns ## KEGG: BDP_1720 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 433 1 432 438 681 82.0 0 MSNEHGRINRLQEVEDLTEYINNGWLHSGESDGPTFLWNDMIREASQEDAENRNNVPVAQ LSDADMVISMPMQWYFDSIAAMVPTAERTDTGVEIPRIDMPTFHLDSQALSGVDAVVGNA IVSTRWLDAVGNLAKAVEMTARFVGNVADRDNEGFDYLKDLIQTVRVYMDAVACNADPMT GEQALNIITQVACNEDFRLNAMQMVELLSCGLSFAQWDDTRMFAYDALNKGIATMSDFAT SASTLANSADDSDSRDMQTDSQSVAQVKTDLGLFEDADSLSAEDLNNLAMLDPALLSEKE IAQAAQNQFDHAVQFLRHDLLRISGDIDEADRFLRDNHTSEPLADAYAARLIAAERWQDL LDFVDLVLRDKPNQVTMMFPEEVVPYEWETIREAALEALGRSDELVAMYQERLDDTYDPN TALNHLKLHAWLNQQ >gi|222441571|gb|ABXX02000002.1| GENE 280 316510 - 316971 279 153 aa, chain + ## HITS:1 COG:no KEGG:BAD_1239 NR:ns ## KEGG: BAD_1239 # Name: not_defined # Def: putative transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 142 17 158 158 241 81.0 5e-63 MEAQPMRLQDLRLKEGMSLEQLAELSGVDHDRLVMFENNPETIRNMHLDTARQIAKALHC NVLELHPDEGWRGGIHCAESGLRDIRRTRGYTQNELSEMTGIPQPNISWFETGYRSTSGM RLDTARRLSEALRCDPTDFLKEAYSRYENKCCI >gi|222441571|gb|ABXX02000002.1| GENE 281 317150 - 320146 3505 998 aa, chain - ## HITS:1 COG:all3375 KEGG:ns NR:ns ## COG: all3375 COG0474 # Protein_GI_number: 17230867 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Nostoc sp. PCC 7120 # 28 996 2 950 957 645 40.0 0 MVDRKEDQSTQFRDTSSGNFEQAKNIATQTQVDPSLADAQTVAQSLGVDLNTGLSQAEAK RRLDKYGPNELSSAPPVPKWKKFLEQFKDPLVYLLLAATGISLVAWFIERANAVPGVEGG EALPFDAIVIVLILIVNAVLGYIQESKAEAAVEALSSMTAPQTNVLRDGKIERINTVDVV LGDIIVLGEGDSVSADGRLFAAASLRIAEASLTGESVPVGKKTDTLAQAKALGDRANMVF NGTSVTQGTGRAIVTSTGMGTQVGKIADLLQATEDDETPLQKEMNYVSKILGSAVCIIAV VVLVALALTEGFQDVHDVIDSLLLAVSLAVAAVPEGLAAILTVVLALGVQRMAMHNAIVK KLHSVETLGSASVICSDKTGTLTRNEMTVERVVTPSGEVQLTGTGYAPEGRMVVDPQTME HAQIRGIIESEAVATLAVGALANDGELRESAASAGNAENVTWEAVGDPTEVSLIVAARKV KADRKYANYERVGEIPFTSERKRMSIVAQDNADAGRLTVFSKGAPDVLLGYCSRIAVGGA VRPLTEGDRQQILATVEQLSSDAYRTLGQAYRPLGTASLAQVPGIMLNSAGHVADIAEQS DVLENDLIWVGMVGIIDPPRTEVRDSVAEAHRAGIRTVMITGDHPLTAARIATDLGIIDK GGTAMTGSQLDELSDEAAFDKVTSEVSVYARVAPEHKLKIVESLQRQGNIVAMTGDGVND APAVKTADIGVAMGITGTEVTKQSAKMILADDNFSTIVAAVREGRGIFDNIRKFLRYLLS SNVGEVFTVFGGVMLAGFLGITQPGSQGVTVPLLATQLLWINLLTDAAPALAMGVDPSTD DVMARKPRKLTDRVIDAEMWGDIIFIGVIMAAVTLIGMDMHLDGGLFTDRSVDAIGHDAQ MTEARTMGFTILVFAQMLNALASRSHLQSAFVGLFSNKWLWGAIALSMVLQLAVIYIPFL NTAFGTVPLSVGAWVECLGLAMIVLIASELRKCVLRAR >gi|222441571|gb|ABXX02000002.1| GENE 282 320553 - 323684 3295 1043 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 29 1036 4 1007 1014 802 42.0 0 MAAQEEATQLQESQETQGVPESRILQARQANASWLTDPTAFAVNRKPAHSNHRYFLGEAT EPKQNLDGEWKVNVTQAANVDVENAPFAAADFNDAGFGAINVPEHLQMAGYLKNKYVNVQ YPWDGHEDPQEPNVPENNHVAIYRRSFTLDRPIAATLENDGTVSITFHGMATAIYVWVNG TFVGYGEDGFTPNEFDITEALNVDGDNVLTVACYEYASASWLEDQDFWRLHGLFRSVELA AQPRVHVETVQIEADYNPSMAAGTLNATLQLRNANDAATVKAKLRDANGTVVWESTQCAN ETITLNSGALKNIAPWSAEEPTLYELTVLVVGHDGPLVEKNVQRIGFRTFRIEDGIMKLN GKRVVFKGADRHEFDAKRGRAITRQDMIDDITFCKRHNINAIRTSHYPNQEYWYDLCDEY GIYLIDETNMETHGSWVANNIETPETAVPGSKPQWEGACVDRINSMMRRDYNHPSVLIWS LGNESFAGEVFRAMHAHAHAIDPNRPVHYEGSVHDRAFDDVTDIESRMYAHADEIEEYLK SDPKKPYISCEYMHAMGNSVGNMDEYTALERYPQYQGGFIWDFIDQAILDSNGRMCYGGD FGDRPSDYEFSGDGLLFADRTPSPKAQDVKQLYANVHMTVDASGITITNDNLFVSTADST FVLRILADGKPVWSSSRRFDVAAGTSEHVEIDWPIDDYRAGAQELVLEASQQLTSACDWA PAGYELSFGQCVVAGGKIADTVTAASAASDGAITLGRWNIGARRAGREALFSLAQGGMVS YKLGEREFVLRKPLITTFRALTDNDRGAGHAFERAQWAVAGKYARCVDTKVEPLGETAVS VTYTYELAIAQRTKVTIRYVADVLGHVDLHVAYPGEKDGDLPTIPAFGIEWMLPVEYSNL RFYGVGPEETYADRKHAKLGIWDTNAFRDRAPYLLPQETGNHEDVRWAEITDDSGHGLRV SQTANTETGVTKPFAMSLLPYSSTMLEEALHQDELPEPKHMFLRVLAAQMGVGGDDSWMS PVHEQYQLPADQPLNLDVALDLF >gi|222441571|gb|ABXX02000002.1| GENE 283 324009 - 324917 1081 302 aa, chain + ## HITS:1 COG:MT1660 KEGG:ns NR:ns ## COG: MT1660 COG3247 # Protein_GI_number: 15841079 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 111 301 6 192 195 76 30.0 5e-14 MSDAMNNPYANNPNQNGSNEQQPQGQPEYGAYAPNQQSQSQQQGGNPNNSGNPYQSEPQT PCYFDGPNANPNPNQNGFFYASYTTGQPYGQPYGQQNSQSDADNGTNNWQPISPFKLVEE WLPKKAKNAIRGTYAVLGIAAVILGLALLIWPGATLKVAAIALGAYFVVSGVVRIVTAIV ELGLPGGWRVLDILIGLMLSVGGVVMLKNAALSGATLAVLITMVVGLGWMLEGVMALVES WRMPSSAWAVIYALLSIVAGFIVLFSPVSSTTWLILFGGCALVAIGIVAIVRAFTFGKSK RK >gi|222441571|gb|ABXX02000002.1| GENE 284 325105 - 325422 321 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351591|ref|ZP_03742614.1| ## NR: gi|225351591|ref|ZP_03742614.1| hypothetical protein BIFPSEUDO_03188 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03188 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 105 1 105 105 167 100.0 3e-40 MASALDILDDLAPISELSNGRTSALLQRADHDPVILIKRNKPSYVLMNIENYRALMERIE DNEDLLLAEKRLDNSTGTTISNEEVMLDLGISPSDLAEAPEPELA >gi|222441571|gb|ABXX02000002.1| GENE 285 325419 - 325748 196 109 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_20442 NR:ns ## KEGG: EUBELI_20442 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 109 1 109 109 115 56.0 7e-25 MNWQVEWLDEAKKDMRKLGKAEQIQVLKGIEKVRTNPLPTSQGGYGKPLRNAERTKLSRL CKIKFRDIGIRVVYKPLLRNGIMTIIVVGIRSDSDAYIKANKRRKEYGL >gi|222441571|gb|ABXX02000002.1| GENE 286 325981 - 326103 232 40 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352369|ref|ZP_03743392.1| ## NR: gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 40 74 113 113 75 90.0 2e-12 MKNNTFNQVINANLASIDPGFGQFALAKASSDLFKKVLNK >gi|222441571|gb|ABXX02000002.1| GENE 287 326238 - 327512 1470 424 aa, chain - ## HITS:1 COG:CAC2753 KEGG:ns NR:ns ## COG: CAC2753 COG0477 # Protein_GI_number: 15896010 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 5 403 17 387 410 107 26.0 5e-23 MFWGLWVTLLILWMGRFVTSFLSMYLVSDMHVSAGVAGTIVSMYGFGGIFGCLYGGALSD RFGRPAMIVIGNLGSAAMLVLLAFIGNPWIMAIALLAYGAISSMPTPAVAAYVSDVVPFR KQKRAYSLQTWAANFGFAIGPIIANQLVKISYALMFYAEAAVLVFATILMIVFFKEVGLG KRPRGEVAPARASQAAESAAGNAVEHAVKQTGESQRPQRFSVWRSYRRACADGALMSMVV LMFLYTLAYYQIVSGLPISMTQIGLGTDEYSSLLTINGGLLCLLQIPAIGLFQRMSNTRV LVLGMSITAVGYAFQIGANSWVAFAIATVLWTLGELGTFPIAATTVANIAPKDVRGTYQG LYNLVWSLSNAFSPLVGGWILNAFGSRVLWICCTVMFVIVAIGFYVTRGPRERAAARNLA VEEG >gi|222441571|gb|ABXX02000002.1| GENE 288 327628 - 328629 481 333 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 66 332 5 255 255 189 39 1e-46 MAMKKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYKEKQATNRRKMADPRLAARRRAA KFSSESDDLVIGRNAVLEALRCGVPASTLYVAARIEHDDRTREIIRLAGIHGLNLMEADR LEMDRIARSSNHQGVVMKAQPFQYSSLAELVERADKKSRAMEAANSASARIAARPLFIAL DGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHMPVARVVNLTKA IESLKERGYYSVGLDGGGDALVGETGFETDPLVVVLGSEGNGLSRLVRETCDSIAGIPMS NMVESLNASVAAGITLYSVARARREAGAAADAK >gi|222441571|gb|ABXX02000002.1| GENE 289 329038 - 330447 1923 469 aa, chain - ## HITS:1 COG:no KEGG:BDP_2237 NR:ns ## KEGG: BDP_2237 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 9 469 1 462 462 830 96.0 0 MESLELPQMDPRVLKATSVKAEDPAASSPEPHALKITAASSNPKMFTLPWEKPLATWPED LLANLPRGISRHVVRFVHVGDEVYAMKEITRNVAEREYELLRRLQKLELPTVQPIAVVTG RHSREGEPLEAILVTKHLKFSLPYRALFARNLRPDTAERLIDALAVLMVRLHLAGFYWGD VSLSNVLFLRDAYAFSAFLVDAETGDLQINLTEGQREYDVDLARTNIIGELMDLSSGSLL PSGVDEIAIGNRLVDRYHSLWSALTDTDKFGPDEMWKIEKRVNKLNELGFDVDELEMKTA EDGKRVLVRPRVVDAGYANRKLLRLTGLDVQENQARRLLNDLDAYRASTWREGEDLEIVA TDWMREVFEPTVRMIPREYRSQIEPAQFFHEVLDHRWFLAEKAGHDVPMAEAVQSYVEKV LPQYKLTTKDVDALNAEADSGVIDDEYTYDDPDDGYNPDDDPDAAVWAH >gi|222441571|gb|ABXX02000002.1| GENE 290 330811 - 331938 1489 375 aa, chain - ## HITS:1 COG:Cgl2410 KEGG:ns NR:ns ## COG: Cgl2410 COG3839 # Protein_GI_number: 19553660 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Corynebacterium glutamicum # 1 374 1 375 376 433 61.0 1e-121 MAEVVFDHVTRIYPGNDKPSVDDLNMDIKDGEFLVLVGPSGCGKSTTLRMLAGLEEVNKG RILIGGKDVTTMQPKDRDIAMVFQNYALYPHMTVADNMGFALKIAGTPKEEIRKRVEKAA EILDLTEYLDRKPKALSGGQRQRVAMGRAIVREPKVFLMDEPLSNLDAKLRVQTRTQIAA LQRQLGVTTLYVTHDQTEALTMGDRIAVIKLGVLQQVGAPTELYDRPANVFVAGFIGSPS MNINTHPVVNGKAKIGEDTVDLPAEAVNKLTAEDNNQIVVGFRPEDASLAAPDDANAFSL KVMNVEDLGSDGYIYGNIITDGSAAEASTMMSDQNKLTTIRVNPRALPKVGDTVKIKIDP SKMHLFAPSTELRLN >gi|222441571|gb|ABXX02000002.1| GENE 291 332258 - 332974 721 238 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 4 236 2 232 234 104 24.0 1e-22 MRNIRIGVVEDDPASCQLVLDYLNRYQQENDEQFTVSVFDDGARIVEKYTPVYDILLLDI EMSEMDGMAAARRIRERDDKVVIVFITAAPQYAISGYEVRALSYLLKPLPWFAFSQELKK SIDMVRRNGDDSMLIETSNGQMRLNLADILYLESIRHTIVIHTLEGKLSINGTLKDMEAK LADHHFFRSNSCYLVNLKHVTGVADQDCVMSNGEQLRVSRPRKKAFLAALTDYIGGGR >gi|222441571|gb|ABXX02000002.1| GENE 292 332971 - 334422 1245 483 aa, chain + ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 251 468 209 425 433 74 23.0 4e-13 MTSVILPNALAGLAGGLAGGSPSIPSVLVTVLSVPPMTPITNALPDIPRSYTAICEWAAC MVYIAVSYRRVPLRRSIIVSAAGLASLVAVQYFDGSMPIWFWIIGMLLAFACMYATILLG AGTGKREGLYITARAFVLAELVASLHWQIVTFIGVRDGFTDYDWRAIALLVVTYALCFGL AWMVERGNFSQATPTLPTASAAIATMAIMIVTFAMSNLSFVSTNTPFSGSVGQEIFYIRT LVDFCGFAILYAQQEQARRIEANTELASINAQLESQHQEYLQSKENIESLGRLAHDLKHQ LAALRAEVDPKHAAAGFEQLEQSVQRYSAQQHTGNPVLDVILTTKERTCADRGITFTAVA DGSLLSGMSSMDIASLFGNALDNAIEATSKLPKREQRLIKLALYEQNRFIVIRVENYYDS RLKKDAEGNLRTTKRDDQHRHGFGVKSIRHIAQQYGGEVTIRTEDHWFVLTALIPRKTGL MAM >gi|222441571|gb|ABXX02000002.1| GENE 293 334452 - 335483 964 343 aa, chain - ## HITS:1 COG:no KEGG:BL1511 NR:ns ## KEGG: BL1511 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 74 263 331 521 573 95 39.0 3e-18 MGADMSEPPKPPTVASQESDVNGVSDFSVFEGYGDYSNEIPVPPKNTGKIVAIVIAAIVV IALIGGIACWMLSNNSKKSAITSAAAQCQDSTSQLQSANNTLSDALEIGKTGAKVTADQV ADVSTVTKLNAAISNAKEAKILSCDTSQGISKLKKSAKAMASEARSMNDKAEKITNAAEA VDASKVLATQNRLKGQLNDAIEQAQSVLDNSDGMVADDSVRMALQQAIDSARNLANGTNL KENDVTAAVDALNAAKDAVQQAMDQYQEASSTPNTVTNNTNIGTNGGSNGGAANSPDNTA GGAAAGGAAGGAANAGDAGGDASAGGDAGDASDGDAAAQNLEN >gi|222441571|gb|ABXX02000002.1| GENE 294 335612 - 336970 1518 452 aa, chain - ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 54 430 1 378 380 160 32.0 7e-39 MRESQESQKTRESQESQNPQGTQPKIGRIPALIAAVAIVGVAIGAAAGLLTLMLYGVEHL ALGYVENSQESGPFNVPAIRCLISVTVGATVAAVIWWLLRTRSTKVPSVKKAVNGDIMPI WQTVVHVLLQIFIVGTGMSIGREVAPRELGAMFGQRFARWVRLDAKDTRMLVAITAAAGL AGVYNAPLAGTFFAVEILLADITLETVTLAFACSALASWVASLVKGTHAFYLIGKADGLF TPDYMAFALVAGMILGAAGALFRRGSQWAEKSKPSGAGILWMLPLAGLLTGVVAIWVPQV MGNGRATAQLSFSSKADLAVVPILLVSFLAKAIVTLLTIRSGASGGVLQPGIALGASGGA VLGVLWMQVFHTNSIGMYALLGACALLAASQQAPLMAICLVMELADAPINLFVPIGFAVA VSAFTASCLGEPLAALRLSKSAEKKVIKANAR >gi|222441571|gb|ABXX02000002.1| GENE 295 337048 - 337374 252 108 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_1773 NR:ns ## KEGG: BLLJ_1773 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 2 108 329 436 436 164 72.0 9e-40 MIRDLRVYLESMGGTNRIAYYRDEKGLEVDVILELVDGRWAAVGIKLSDLKVMEKNVDKL HAFKEKVCGNPLSQVREPEFMAFIVGRGDIAYRRDDGILVLPIATLGA >gi|222441571|gb|ABXX02000002.1| GENE 296 337446 - 337895 279 149 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1953 NR:ns ## KEGG: BLIF_1953 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 2 149 4 151 151 134 50.0 2e-30 MSDERFSPEQAQYLASLPAVISITGSRIRYAEWFKRECVSSAENGESPTVLFREAGLGPE LIGEKRIERCMHRWRKTIRIEDPGTVDRVNLPDAEVTSSRTNEGNPGTGGNDMRDLIIRR QALYIRRLELKVDDLKMQLSQQSLSNDVQ >gi|222441571|gb|ABXX02000002.1| GENE 297 337907 - 338695 444 262 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1819 NR:ns ## KEGG: BBPR_1819 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 258 1 258 286 379 97.0 1e-104 MLDLHSGSEYGAARIAAMIAAAVTIVLTVLAAFGSMVPYAQADSFGALTINAVWGRDTAS PKLLAGDTYSIVRVATVTTNNDGSVSSYKTVGDFSGLTADWERLTSSEYHDAAKKLATHA AKNKLYQHSGTTNVAGQLTFQNLPLGLYLVSRTSSAKANKAYDCDPFLISIPGSGDTSAD LNITVEPKFSTGTPVVPPENNPSEEPGNPGLIGRTGAAVGSIAAAAGLMLLVTFILIRLR MRRRIRDVNSAGKSHTDDCTMK >gi|222441571|gb|ABXX02000002.1| GENE 298 338679 - 339662 694 327 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 17 283 1 261 279 194 38.0 1e-49 MKRLRNILPLLVILGGMLILFYPTISNFLIMRNASRAVNNYDASVEALSQEQYQKVLDAA HAYNEKLAQNDAGETDALASAVNSASTDEEYNSLLNIDGDGMMGYITVPKLKETLPIYHG TSEKVLQSGIGHLEQTSLPVGGASTHAALSGHRGLPTAKLFTDLNLMKKGDKFYITILKD TYAYQVDKITTVLPTNTKQLAIEPGKDLVTLITCTPYAVNTHRLLVRGHRIPYAPQQQDD AKSTFHVDIPLQYLLPSLALIALLIAWHLWQRHERRRRQSGSAKVASGDSDSADIEPDGD LPPQPDSTNNQSHSSRRKGPGRHVRPA >gi|222441571|gb|ABXX02000002.1| GENE 299 339743 - 341347 1716 534 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_1900 NR:ns ## KEGG: BLLJ_1900 # Name: not_defined # Def: cell surface protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 534 1 529 529 641 88.0 0 MKSLMKRVFAAAAAIATVFGLAATTVATANAADNATLTVSTTDAKFAGKTVNAYKMFSAT VSGDGGSKAVSYTLTDEWKPFFKNSTASGLTGATDENVNDKANDYVSKLKGEDLVAFATK ASNWAQTKANNITAGTTAKVSAAATDGKYLATFTGLDYGYYVVAVPGATLANASGQYATL VSVDSTNVTANIKGDLPTVDKKVQVGGTGKDATDAKIGDTLTFTLTSTIPDMSAYDTYTF NFKDTLSQGLTFGQVTSVTVEGVTDPLTVNTDYTVTTPTVSDNTLTVAMKDFKAKQQANA GKKITVTYTATLNEKAVVGGVGNTNSATIQYSNNPSSGGTGESEPSKVRVFTYGFTVDKY TGDKYDDDATRLAGAEFTLAPKNGTAMSFVQVDAGSATANAVYRVAKAGETDTTTTITTP ASGKVVFRGLENGEYTLTETKAPAGYNKLASAIGVKVDGKNDGTDTTDATVAITYNNDNG NSYNQTASNGVIPVQNKSGAILPGTGGMGTIAFTVIGVLVIALGVAWTLKRKNA >gi|222441571|gb|ABXX02000002.1| GENE 300 341412 - 349118 7087 2568 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1762 NR:ns ## KEGG: BBIF_1762 # Name: not_defined # Def: cell surface protein with LPXTG anchor # Organism: B.bifidum # Pathway: not_defined # 1 2568 1 2566 2566 4171 96.0 0 MQVAATALGGRDFEGQATKEINGKTYILIGNEQQLRAIGSGKKVIGRINKVTQTCMQQGA LNYQWVDGTPSSEYAGDADLSDSDILRDTDASDHDSPLLACTALSVNRTRTKYYGVGADG TQTDYSAANTGLTYSADANYLIFRDIDLSKNAADTNNTEWTPLMFSGTMLGAVSNDGDTE ASLWKAVGADGASVVHATAARPVISHVVVNQKDMVSNVKGDQLDVSKQQGIGFFASITNK TVMNSNSLGSAGTAVVSNLKLQDVSVTNHTSESYIPPTLLGMLTSAVGLLLDTLLKALKL LTFGQVDLDLNLQGLLTLHKDNPSNLATGAFAGRIYGDTKVTDCEVADVSVSSVSRMTGG FVGYVEGATRYDAVSGIVGALTNVLSKILGVIPFLGLGDLVDWLLSGTLGLNALIPVGYY NPVISNSSVNGFKENVVIGNKDNSQAGGFVGAQIGAIIENSSVTSTNGFTVRATQYAGGF AGVSRNGNVGGLINSLGVDLLSALRPQSLIENSGLTVNGDDKITVQAEDYAGGFNGAMAN AYAVNNSITASVAVTADRSHAGGFTGFASVGWGLELGTDDTTNASLLKQLTKAVTKLLSG SDNGAGELLSIVGVNPSVILGTQMKGSLTVAAGGDYAGGLVGEGSGTVIGDSSRNRLQNL TFWKYNNLRDFPQQRSTTIEGLESVTATGSYAGGIAGDLQPTTVAGLLNSVVKIGDIATL KKFDQFAAFTVENMSVTAPASGLTVTAGSYYAGGAIGCATGGDVANTNLTNLATVSARGE AGGFIGFSGPGDAIGAGGLNVLGLIKLSGLLSVAQYSSVAVTASNVNGISGGFTVAATGK NENNETTDYAAGGFYGQANSTKTRESHVTNLKSVTADTSTSDGVAGGFVGFSTTGGLADA LSNAEDSSILDDLIKGGLLSVNDLLGAVPYLIPSYTYTTVTYVNGGYVEGDIAGGYAGNF QSGKVNQFSETDLKNDSTLAGVQSRVQTNPVAVVNLDHVTGGAYAGGFGGKVVSGALASA GNGGLSLLGKFGTVDLANLLQVVQGYVPFISYAGVHSDATTVEATSGNKISDPDDPGFTV SATRFDQSDTQSGSAGGYIGYGSGVQVSHSSVTQLRRTDVKAPKNLETAGSIDGTYLSKD STYAVTAARYAGGYIGKMDIGSAAAVGGGLSLLGQNVNLNDVLSVLDVVVSSIEHSDVTG GIGGYSVLASTANHRNANNEPDPLGMAGGFAGDIEGGYIQDSSSHEFVYIIGQVSAGGYV GAMQPGAVANVLGDGSVLKKLVNLDNLLSLVQDFVPTIRNSSTDAAVCGGAVRAQAASDT TTRRGMAGGYAGRNRGGHIWGNNTAAWKQENTDGKYNGPQRVAYAARIRSVYGAEIAGGY TGFMEAADTAQGGSLSLLGGLIKAGNLAGVLSVVYPTEEHSKVTGPLRNMSYDQWKTWAD NIGKYGAYGKEFTEVATGDGAGSVTDQDSLDKFLESYIFGFNVVAGRAEYQTGANLHDSG VAGGHVGLMCTGTITDGQSMDVKTVSAMRAAGGYAGTMESGSASSFGSIQLFGDKGIKLD LGQMLDVAQVFVPVVKSSSVAGYRKGMKVVATGEDITHGTGNAGGYAGLAVGGQIWGDLD QNGQKLAEGVTAAGANVSNLRKVEGRNNVGGFIGVATAGAVADVDTNASEGFLQGILDSL VSNPASLVSVLQATVTTIRGAHVSSDDPAWGYTVNGAYESKDDKGNTTAKYALNAGGFAG SLQAAILGDKDSAKGTGSEADPNNDPASLTVNGLRAVEGGQYAGGFFGLADVSSVASVGG GEAGDKQDTNLLLKLLKVGNVGVLEAFRTFIYDGQVNGVSDGIQIVAHDSTTKGMLDSKR YTGAVGGFGGGLINGSVKQSAVTNLNSVTGVNYVGGFIGHLGKSGTVAADNAQLGTDALN LLGATAGVLDIWGSHVGDSRVTGIPDGYTVTATHHGDNYGKATDKATGREVAGGFVGYVD LARVKGCTSDNLKKVTSGEIAGGFVGETSRAYLVDAKVNSVLVELLLQVVNALVKLLYLD KAEQVGVIDLGKWFPAIFGKVFDLKVLSEGDVLYVNLFGLKVSVALSKADDENQQQTDVA IVTIGDSVIKLPCSKDGIDMDGSGSNLTVQLIKGNRTRVEQSTVTGIANGYDVFGGGATQ DTDGVKDLSTGYTGGFAGLNDEGVLADDHMVYADTIRGASGLVDPFSNTKLKSVWDFNTM SDILGPVDDGNGDKAYNTYRIYRKAAANASEARTSAQDGNKIFSQKNTADDALNTGLDRW EVKLFDVVNTYDSSAVHGSASGDAGTTWVGIKDAVVDSTDGSTKTKLDAYQSPAKAVLML DATVTDNNGGLTPEPDDGQDPCGKDGCRSVDLTVQKVWKDGNLERPQSVELKIAAHYTDG RGNTVTPQTIQCFGADCTTVTQKNPWTVTLDSSDASSWSNTWRKVIQGLPVAFVDGQDAN GKDIVRYYTYTVEETAVTYKDGDTTKTIKPAEAGYQVSVSYNTKERVAIVTNAALLPDTG GAGTMWFLMFGLLLMGAGVVWYVRDQRVQSGTVRSGSSRIRKRGAHAA >gi|222441571|gb|ABXX02000002.1| GENE 301 349444 - 349653 121 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291455652|ref|ZP_06595042.1| ## NR: gi|291455652|ref|ZP_06595042.1| hypothetical protein BIFBRE_02842 [Bifidobacterium breve DSM 20213] hypothetical protein BIFBRE_02842 [Bifidobacterium breve DSM 20213] # 1 67 1 67 223 109 91.0 8e-23 MSSELKFVRCGFNGGTERESGRQCLSLKRCLASVIAVSLSIVCMVPAAYAQNIDDVSSSP NAVISGGGG >gi|222441571|gb|ABXX02000002.1| GENE 302 350136 - 350690 954 184 aa, chain - ## HITS:1 COG:no KEGG:BDP_2252 NR:ns ## KEGG: BDP_2252 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 184 1 184 190 314 94.0 1e-84 MTDNNATQPAEKVGPIRQWIKDHPNIWEFILFNVLSNISTITRFVVTWIGTAIFISGMGL TQPFHFLIFNYDTQGNGLGGFLTFLLAEALAQVVNFFVQMKWVFKSDSSFKDAAWKYVIL AVIIVVVNLVLPGYVTGLCQGWGMGAGIAGTIASVVNTLLAVIVSYPLLKFWVMPKSKSK ETAK >gi|222441571|gb|ABXX02000002.1| GENE 303 350683 - 353112 3329 809 aa, chain - ## HITS:1 COG:YPO2803 KEGG:ns NR:ns ## COG: YPO2803 COG1472 # Protein_GI_number: 16123001 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Yersinia pestis # 6 669 38 724 793 389 36.0 1e-107 MELEELSVVEKAAMLSGGSEWDSRGNDRADIPSFVMSDGPHGVRRQLGEGDHLGIGVSKP ATCFPTAGTVANSWDPALAEEMGEALGSEAHDLDVNVLLGPGLNIKRNPLCGRNFEYYSE DPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELRRQASNSVVDERTMRELYLTGFEIA VREAKPLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGGSNSAVAAVKAGG SLEMPSPGFTSARELEGAVKAGTLSEADINARAAEVAKIAAATKLVGVGRNDLLKDDIAA AHHDVARKVAEGSSVLLKNDNATLPFKAGTRVAVIGDMAATARYQGSGSSKVNATKEENI LEEVKNAEGLVLAGYEQGYDRQGKADRVLVEDAVALAGKESVDVVLAVVGLDERSESEGL DRSTMAIPQVQNDLVEALKGAGKPIVVVLVAGSPVELPWIDDVAAVLYVGLSGQAGASAT VRALTGEINPSGHLAETWPMHYEDCPSSSWYPAIGRDAIYREGPFVGYRYYETAGVPVRF PFGYGLSYSTFTYSAATAGENGIDVMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGF AKVSLAAHESKSVHIDFDRYTFRHFDVASNEWKTETGEWTLMVGDNAEHLPLTIPHTVAG DVNPVAADTALGHYLSGHVKEVTDAEMAVLFGHEVVAPGKPVTFGVNDPIMSWVDSKGFV ARTVAKTLTKQEAKIRQKTGAPDLNTLFILNMPPRAMSKMTQGMVDSAMVDAIVKIANGH TFRGLGGVIAGFFRNQSANKRTAKELNND >gi|222441571|gb|ABXX02000002.1| GENE 304 353345 - 354046 341 233 aa, chain - ## HITS:1 COG:no KEGG:BDP_2256 NR:ns ## KEGG: BDP_2256 # Name: not_defined # Def: PAP2 family protein # Organism: B.dentium # Pathway: not_defined # 27 225 1 195 199 272 74.0 7e-72 MHMKNGSIARAAAVVIATAILCGIVPMIGVALRNSAIATMRETNILQALAALPEGLRDCS TVLAYLFSTVGCIAIVAALAAVDLRITGSRRVVIRDVVVSAAPILYVTGVKWLVERPRPI TSVGSDLLPGDPSFPSGHTAAAVIVSVMMILTVRNFARKRFPDGEDDGRANGRRVFLRRA VIGAVALVVAVACSRLLLGLHYPTDVIISATICPLISYAVWCVWNAYESAAER >gi|222441571|gb|ABXX02000002.1| GENE 305 354251 - 354691 410 146 aa, chain + ## HITS:1 COG:Cj0225 KEGG:ns NR:ns ## COG: Cj0225 COG0456 # Protein_GI_number: 15791597 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Campylobacter jejuni # 7 145 1 138 148 116 41.0 1e-26 MTEPIAMTIRHMKIEDYPLVYGLWTRCTGFTMRDIDDCEDAIKTFLKRNPDTCFVTEDDD GRIIGAILAGHDGRRSRIYHTAVDPDARGRGIGSMLVGRVVETLRAIGLPKVAVGVPTDN DAGNDFWERQGFAVRDDLVYRELPLE >gi|222441571|gb|ABXX02000002.1| GENE 306 354934 - 355569 199 211 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 196 1 201 305 81 29 6e-14 MTICLQLDHVNYSYGAAKIRVLSDVNADFESGKMYAITGPSGAGKSTLLSLLAGLDAPSD GVVRFEGEDIATTGYSKHRREHVSLVFQDHNLIDYLTPEENLRLVNPKADMKILEDLGLS REESKRNIMHLSGGQRQRVAVGRALVAPGRAILADEPTGSLDPEMTDEVIDLLRHAAHQL GKCVIVVTHSKRVADSADAVYTLRHKKLAKA >gi|222441571|gb|ABXX02000002.1| GENE 307 355582 - 356805 797 407 aa, chain - ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 46 406 5 386 387 125 27.0 2e-28 MTGMNVWNRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALQKMSDDIGRSMGIGF TVDTGENPASLKEASRFSRIPGVGKTVYERKTLAGVDGAHPVVPEHGPRLDSGLSTQVSV LGTTDSSLSEEFQSGLYRLEQGHHISGNGRNVLIHRDFARENGLSVGSTLRLSQEDRDST VRVAGIFSGNVQAQSPMPSDASENLIYAGAQVVSALTGEERVGTIRCLSDNPQALSAAVA QAKKIAGSKYGVTDDSARLSGVLQSVETVRDLVRMVLLSVCLADVLVLGMALVFWIRSRI HEIGTLLALGIGKMQIIAQFAIETGLMAVVAALCSLGTGSLLSGYVSSLLLHDSGVAPLE SLQVEALPPEQTLLILLLGCAVIAIALAVSCAAVLAKSPKSILSSMR >gi|222441571|gb|ABXX02000002.1| GENE 308 356802 - 358169 877 455 aa, chain - ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 4 451 2 454 459 217 30.0 4e-56 MTFISRAARYVLRKRVRTAVLFIVLTIITASMLSATAVSRAAQHEAGQIEKQAVGGFVLA SNLQGSMLTPRGGGMVRPADVQRISKLSGVDSYMVRQNATADLVGASVVKVPGGDDYDAE KEQQFGNTANVIGTNDSSKLNVFTSHTLGMVDGRHLKTSDKHMSMVHEDLAKTNGLKVGD TLTLKANPYDADNESHSTATVKTTIVGIFKGDSDRKVSSRAELTSNTVYTDLDTTSTLYQ YKAGKEIYQDATFVLDKGVDVEKTMEAAKKLPVDWNNYQITRNDQYTSSMLNAARGVRSM MLGALIGVTISAVIVLSLMLLLWMNDRRQEMGVLVSLGIGKPSLIAQYLTEMILIGLPSL ALGWLCARGVAQWLGTSALRSVNASAAKELSSMGQVGGDLESNMSVRTLDSLTVSIDTTA VLYVSLGLLAVMLVCVAISCIPMLRKSPRSLSELR >gi|222441571|gb|ABXX02000002.1| GENE 309 358465 - 358653 209 62 aa, chain - ## HITS:1 COG:no KEGG:Blon_2331 NR:ns ## KEGG: Blon_2331 # Name: not_defined # Def: sugar (glycoside-pentoside-hexuronide) transporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 13 55 455 497 507 63 67.0 2e-09 MSNATAADGGVRLMFAFKVKINEKIHAEIVEQLEAKLAAGEIPDEEVKTVETVEASTRRP RF >gi|222441571|gb|ABXX02000002.1| GENE 310 358962 - 362033 3370 1023 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 9 1019 4 1012 1014 790 41.0 0 MTNSNRVEHASETWLTDATVFEVNRTPAHSNHKCFTHDPQSGEYSDLTQSLDGEWRVEIV QASDIDFNEEPFVAENFDDSAFYRTQVPGHLQMAGLLKNKYVNIQYPWDGHENPLEPNVP ENNHVALYRKKFVVSKRLADTKESRGSVSIVFHGMATAIYVWVNGLFAGYGEDGFTPNEF DITDLLHDGENVVAVACYEYSSASWLEDQDFWRLHGLFRSVELTAQPHVHVENMQLEADW DAESGTASLDAALSVRNASDAATISATLKDSEGNVVWETSTNADANTTFASGSLQGLEPW SAESPSLYELEVNVIDQAGDIVEAVVQKVGFRRFHIENGIMTLNGKRVVFKGADRHEFDA KRGRSITEQDMIDDVIFCKRHNINAIRTSHYPNQERWYDLCDEYGIYLIDETNLETHGSW CLPGDVVTAETAVPGSKARWEGACVDRVNSMMRRDYNHPSVVIWSLGNESYTGDVFRAMY KHVHDIDPNRPVHYEGVTKNRDYDDVTDIETRMYEHADVVEEYLKNDPQKPYISCEYMHA MGNSVGNLDEYTALERYPHYQGGFIWDFIDQAIYASQPDGSTRLCYGGDFGDRPSDYEFS GNGLVFADRTPAPKAQEVKQLYSNVHIDVTDRSVSIKNDNLFISTGGYQFVLRILADGEP VWQSERRFDVPADSACTFDVEWPVDLYRANANELLLEVSQRLAEATDWAPAGYELAFGQT VVAGTKAAEDAALPADGIVTVGRWNAGVQGSGREILLSRTQGGLVSYTFDGHEFVLRRPA ITTFRALTDNDRGAGHGFERAQWMAAGRYARCVDNVIEQVDEDTLKAVYTYELATPQRTK VTVEYTADTTGRLNLHVEYPGESGDLPTIPAFGIEWTLPVQYSNLRFFGAGPEETYQDRK HAKLGVWSTDAFKDHAPYLMPQETGNHEEVRWAEITDENGHGLRVSRANGAAPFAVSLQP YSSFMIEEAQHQDELPAPKHMFLRVLAAQMGVGGDDSWMSPVHSQYHIPADQPISLDVNL ELI >gi|222441571|gb|ABXX02000002.1| GENE 311 362215 - 363231 515 338 aa, chain - ## HITS:1 COG:BS_lacR KEGG:ns NR:ns ## COG: BS_lacR COG1609 # Protein_GI_number: 16080470 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 333 1 328 330 191 37.0 2e-48 MATIREIAERAGFSPATVSRILNDDSSLSVKEATRQKVLNASLELGYENVPRYQRVTIPQ DIALLDNAVPDKGLQDMYSNELKAFLYQHAEDERMHITEYRNVNDLIKNKGKHAGFISIG PAPFGKDVLLRLHNAFQHGVFIDINPAPDLFDSVQPDLEQTVLDALDTLTASGSRRIAFV GGVGNIMGDHEYPEDSRAFAFRNWSVRLGLDINGLVLEEGPFTIENGRALGEKLIQMHSN DLPDAVIIAADPIAVGVLQAFASVGILVPRDIRMVSINNQEIAEYTSPALSSYDINKDEL AKAAVFMLSEALSTRRSVNQHVRISAKLVVRDSFVPSL >gi|222441571|gb|ABXX02000002.1| GENE 312 363417 - 365768 854 783 aa, chain - ## HITS:1 COG:no KEGG:BLJ_0327 NR:ns ## KEGG: BLJ_0327 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 783 1 783 783 1568 96.0 0 MKLTFDGISSCWEEGIPLGNGRMGAVLCSEPETDVLYLNDDTLWSGYPHAETSPVTPEIV AKARQASLHDDYATATRIIKEATLQEKDEQIYEPFGTARIQYSTSADGRESMKRQLDLAR ALAGETFQMGDANVHVDAWCSEPDDLLVYRMSSDAPIDVNISVSGTFLKQSRASLETVSD GHRATLIVMGRMPGLNIGLLPHPSENPWEDEQDGTGMAYAGAFSLTVTGGDINVGDNSLQ CSNITGLSLRFRSMSGFKGSDQQPERSMTVIADHLEKTIDEWSTDLQTMLDRHIADYRRY FDRVAIHLGSAHADDAELLFSAILRSDENKESHRLEMLAEAMFDFGRYLLISSSRPHTQP ANLQGIWNHKDFPNWYSAYTTNINVEMNYWMTGPCALQELIEPLVSMNEELLAPGHDAAD RILGCRGSAVFHNVDLWRRALPANGDPMWSFWPFGQAWMCRNLFDEYLFNQDASYLARIW PIMRDNARFCMDFLSETEHGLAPSPATSPENCFLVNGEPVSVAQSSENATAIVRNLLDDL IQASHDLENLDEEDRDLVREAEAVRSQLAETRLGADGRILEWNDEFIESDPQHRHLSHLY ELHPGAGITSKTPHLEEAARKSLEVRGDDGSGWSIVWRMIMWARLRDAEHAKRIIGMFLR PVDANAETNLLGGGVYDSGLCAHPPFQIDGNLGFPAALSEMLVQSHDGWIRILPALPEDW HEGTFHALRARGGIQVDATWTDQTVEYTLRCSKPTEITLNVLGTDMGRVALSPDKPFKGS IRR >gi|222441571|gb|ABXX02000002.1| GENE 313 365795 - 366688 917 297 aa, chain - ## HITS:1 COG:yjhH KEGG:ns NR:ns ## COG: yjhH COG0329 # Protein_GI_number: 16132119 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli K12 # 6 296 21 311 319 213 36.0 4e-55 MTCNAQFEGVFCPSITITNADGTIDYDNWGKHLDHLIDAGIDGVLLFGSIGEFYAIDVKT KAEAVRFAVSKVAGRMKVLVGVGDTNLDNVRTLAAESEVAGADALVAVSPYYFGPSPDCA KRYFSAVAKATTLPVILYNFPARTGNDLTPELVADLAAENQNIIGVKDTVDTISHTRKVI AAVRKVNPSFSVLSGFDEYYTVNRISGGNGVLCGLTNVEPETFVSLHHAWQSGDYAMAIK SAERISYLMRLYDTADLFISAIKGAVKAKGLPIDTSIHEPAVQLTDEQYRNIQSILK >gi|222441571|gb|ABXX02000002.1| GENE 314 366685 - 367506 382 273 aa, chain - ## HITS:1 COG:Cj0487 KEGG:ns NR:ns ## COG: Cj0487 COG3618 # Protein_GI_number: 15791851 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Campylobacter jejuni # 1 261 1 249 256 108 27.0 1e-23 MQRIIDSHFHIWDPSVQPLSWLDGTDGSITRRYDMDCLKHAYASYNEHHPDAAVNFIGGV YVEVDTDDTSLEDRLLSENHDPLLLATSMRSTVGPAMRVPLYAHGVREPLHTPASPRGRC LQDDFIRGLQLMADKNMPFDACVRVDELGDLAQACEQVPEAIVIVDHMGNISDLHNLESS SDALHRLGELPNVYVKVSGYPTDDPRFVSTLLDLAQAAFSNKRLLYASNWPVVGLYADFD SHLSILLNRFAGNDDFFLNNARNAYHIVERKIS >gi|222441571|gb|ABXX02000002.1| GENE 315 367517 - 368308 823 263 aa, chain - ## HITS:1 COG:Cj0485 KEGG:ns NR:ns ## COG: Cj0485 COG1028 # Protein_GI_number: 15791849 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Campylobacter jejuni # 1 263 1 258 262 266 51.0 3e-71 MDLHLKNKVIIVTGGFKGIGKGITLRLAEEGAIPVVLNRSDGADDEFRQDIEQITDSYDT YLIDLNNTDEIAPIVESVMKKYGHIDGVVNNAGRNDNLALETTSWRQFEESLHGNLTHYY ELVHQCVPALKASKGSVVNIGSKTALTGQGKTSAYAAAKGAILGLTREWAAALAPAEVRV NAVVVAEAWTPLYAQWIKTFGDEQAQREQLAKITDRIPLGHRMTETSEIADTVAFLLSDR SSHTTGQWVFPDGGYVHLDRALD >gi|222441571|gb|ABXX02000002.1| GENE 316 368324 - 369601 1481 425 aa, chain - ## HITS:1 COG:BMEI1707 KEGG:ns NR:ns ## COG: BMEI1707 COG4948 # Protein_GI_number: 17987990 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Brucella melitensis # 1 424 1 424 425 463 52.0 1e-130 MSVITKVTTYDFRFPTSATFSGSDAMNPDPDYSSAYVVIATDAGDSGNGFVFTIGRGNDV VVRAIDSMSETLIGRNVEELLDNMRLAWDMFVRDSQLRWLGPEKGVEHMAIGAVLSALWD LKAKRAGKPLWLLLSEMEPEELVATLDFRYLTDALTPQEAIEILRAAQEGKAERIAHLKE VGYPGYSTAAGWLGYSDEKMVRLAKQETEVMGFKQIKLKVGQNLEDDLRRLKLAREAVGP DIAIAVDANQVWDVPQAIEWIGKFKDYDLAWVEEPTCPDDVLGHAAIQKAIDPIPVATGE QMQNRVMYKQYLQAGSFKVMQIDATRVAGPQEIVLEYLLAKKFGVKVCPHAGGVGLCEAI SQLAMFDYVSVSGEMEDRVVEYVDNQHEYFVHPTVIKNGRYVAPLAPGNGTEMKLDECMK YLHKD >gi|222441571|gb|ABXX02000002.1| GENE 317 369693 - 371099 1384 468 aa, chain - ## HITS:1 COG:BH0905 KEGG:ns NR:ns ## COG: BH0905 COG1653 # Protein_GI_number: 15613468 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 46 454 31 441 445 75 22.0 2e-13 MTHKGVIMKKKSVRLVAAIAALAMTAGISACGSDTNGSQAKSEVTAKEVESALTDTSKNV ELTVWAYSAKQMEPTVKAFEEKYPHIKIKFVNTGAAADHFTKFQNVVQANKDIPDVVQMS ANKFQQFAVSGALLNFANDSIDKAWSKLYTKTAWAQVHYAGGLYGVPQDATPLANYVRKD ILDEHNLQVPESWEDIYNEGVKLHKEDSNKYMGILGSDISIFTNLYRSVGARLWKVNSVN DVELTMNSGKAKEFTEFLQKCLKDGVLEGGTVYTDEFNRSVNDGRYATFISENWMGNMYK DQNPSLKGKMVVTTPPSWNNQHFQSSSVGSMMSVAAACPKEKQAAALAFINWLDSAPDAI QSWQDTNSGNYFMAASVYQDDKTVREKKETDGYFANTDVNSVYFDSMDNVNTDWEYLPFM SQVEVVFNDVIVPEMNENGDLVGAMAKAQQKLKAYAEDNGFKVTTDAD >gi|222441571|gb|ABXX02000002.1| GENE 318 371193 - 372170 1213 325 aa, chain - ## HITS:1 COG:SP1681 KEGG:ns NR:ns ## COG: SP1681 COG0395 # Protein_GI_number: 15901516 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 65 324 30 278 279 132 32.0 6e-31 MSEAIAKPRSKSLQRRDAKLALKASKRYKRMQQREPAPKLTGKQRVLNWLLHIIMVLMVI YCLVPLLWVIFSSTKTSEGIFSSFGLWFDDKNVFWQNVQDTFAYQNGAYTRWLFNTIMYA AVAGVGATIIATFAGYAIATMRFPGRNALLAVTLAFMSIPSTVITVPLFLMYSKIGLVGT PWAVIIPQLATPFGLYLMIIYAQTSIPVSLIEAAKLDGASTWTIFWKVGFLLLSPGFVTV LLFTLVGVWNNYFLPLIMLSDTNDYPLTVGLNMWLKMGAQGTANGQVPNNLIITGSLIAV VPLIIAFMFLQKYWQSGLAAGSVKQ >gi|222441571|gb|ABXX02000002.1| GENE 319 372170 - 373081 960 303 aa, chain - ## HITS:1 COG:lin0760 KEGG:ns NR:ns ## COG: lin0760 COG1175 # Protein_GI_number: 16799834 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 23 289 19 282 296 132 29.0 6e-31 MTNATAKPDTSGMRKPKREYIGILYCLPYVVVFLFGMIIPMFYALYLSFFKQSLLGGTTF AGFDNFIRAFKDEALWGGFKNVLIYAAIQIPMNLILSLVAALILDSQRIRHIAVLRILLF LPYAVPGVIAALMWGYIYGDKYGLFGQIAGMLDVTAPNMLSKQLMLFAIANICTWCFLGY NMLIYYSALIGIPNDLYESARIDGASELRIAWSVKIPQIKSTIVMTVLFSVIGTLQLFNE PNILRTSAPDVINSSYTPNIYTYNLAFNGQNVNYAAAVSLVVGIIVMALVAVVKIIGNKW ENK >gi|222441571|gb|ABXX02000002.1| GENE 320 373112 - 373396 60 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLPTTSLPLPFHPSVRSIYKVLQKRANKTSLCVAKFSLSYFLALERLYCNDICTLHPSG KQQKINVHGTHFRYIDSNTPIKYLFQGNENFAIL >gi|222441571|gb|ABXX02000002.1| GENE 321 373438 - 374481 685 347 aa, chain + ## HITS:1 COG:SMb20674 KEGG:ns NR:ns ## COG: SMb20674 COG1609 # Protein_GI_number: 16265129 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 14 341 3 327 339 156 34.0 4e-38 MTTIKTTSRPKVSDIAQAAGVSPATVSKVINGRNGVSDETRDRVELLLEEAGFRKKLPTT KTMRSIELVVNEMTNNGSVEMVKEATSYARDFGIGITVSCAGPDSEEHATRNEASSCLRS AIERNPLGVILLLSNISSAEESLLQTRNIPYVIVDPVGQVSADALGVGIDNWTGGMLATQ YLISLGHRRIAVITGPTNSQSSQARLSGYMAALQKNGISADPHLIKVGDYVSDKAYKAAC DLLEMREQDRPTAIFAFNDLGAINVYRAARQHGISLPEQLSIIGFDDVYPAASMCPSLTT IRQPFNLIARQCIDLILEAREGKVEQNYFILPTQLVERESCTSPALP >gi|222441571|gb|ABXX02000002.1| GENE 322 374527 - 374844 280 105 aa, chain + ## HITS:1 COG:no KEGG:BAD_1603 NR:ns ## KEGG: BAD_1603 # Name: not_defined # Def: beta-galactosidase # Organism: B.adolescentis # Pathway: Galactose metabolism [PATH:bad00052] # 17 104 557 691 692 92 42.0 4e-18 MRSLPEETVYHPLTPADVVPVSPIGNDAEALASFKDDPWTGMDGRPAIVSNAYGDERNVY GGARLGHNGITKSLPADGEPIVMSSVERDGTIATINLNGVLIIKN >gi|222441571|gb|ABXX02000002.1| GENE 323 375209 - 376552 1165 447 aa, chain + ## HITS:1 COG:BH1924 KEGG:ns NR:ns ## COG: BH1924 COG1653 # Protein_GI_number: 15614487 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 7 437 2 426 426 127 27.0 7e-29 MKFFMKKKMIALCGAAAMILPLAACGTTQAGTTDEQGKTVVNVWAWDNNLKANAKVFMKK NPNIVIKFTNAGSGKDEYQALNNALEAGSGVPDIAMIEYYAIPEYAIKGSLKNLNDYGTA KYKDFYTPGTWNAVNFNGGMYGMPVDSGPMAFYYNKEVFDKAGISEAPKTWDEFYQDAKK IKQTGSYITNDPGNAGFFNAMVWQAGGHPYSTSKDGTKVTIKLTTDKGVQKFCDFWQKMI DEGLIETKTKDSSDDWYRSIGSGEFASVISAAWAPGMFLNNAPEGAGKWRIAQMPTWNAG ENVSSEYGGSSLALMSSSKNADAAYKFMEFASTNSDAIMSRVNQGGFPADLKTMSNDEFL NQTTMVNSDGDTVDYFGGEKFNAEFAEAAKHVTSKFEFLPYDVYARSVFTDTVGAAYMGQ TTMKEGVKAWQDKLVEQGKSQGFTVNE >gi|222441571|gb|ABXX02000002.1| GENE 324 376562 - 377299 199 245 aa, chain + ## HITS:1 COG:SMb21598 KEGG:ns NR:ns ## COG: SMb21598 COG1609 # Protein_GI_number: 16264786 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 1 179 1 185 349 83 30.0 4e-16 MVGIKDVAALAGVSISTVSYVMTGKRPIGAKTRQRVLQAARDLGYLAKNGSPAPLNGETH FVALSSPVHDSTSYTNYCAYFLNFLKAARQLGYETLLLTEETGDEQLRSIIDTGMVDGVA LMDVTMNDPRIELAQFSTIPFISIGHPMDEINVPCIDTDFIEMGEMIMQTLHRNGHDRIL FIGGKKIDYERAGGANYLIRLRTSMHAAAARYGIHIDEEFTDNDDFDAAENLLERFISDK KIQRS >gi|222441571|gb|ABXX02000002.1| GENE 325 377410 - 377577 91 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212716993|ref|ZP_03325121.1| ## NR: gi|212716993|ref|ZP_03325121.1| hypothetical protein BIFCAT_01939 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_01939 [Bifidobacterium catenulatum DSM 16992] # 1 54 283 336 337 98 83.0 1e-19 MGKRLRIDEFPLMPAELCQLGMNMLVHLMDGTIKRKENATLIHPIYKQRGSITSL >gi|222441571|gb|ABXX02000002.1| GENE 326 377609 - 379417 1908 602 aa, chain + ## HITS:1 COG:lin0223 KEGG:ns NR:ns ## COG: lin0223 COG0366 # Protein_GI_number: 16799300 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Listeria innocua # 23 602 6 552 553 532 47.0 1e-151 MTDFNRSTLPDTVRSNGATPNPWWANAVVYQIYPRSFQDSNGDGVGDLKGITSRLDYLAD LGVDVVWLSPVYKSPQDDNGYDISDYQDIDPLFGTLEDMDELLAEAHKRGLKIVMDLVVN HTSDEHAWFQASRDKDDPHADWYWWRPARPGHEPGTPGAEPNQWGSYFGGSAWQYDPKRG EYYLHQFSRKQPDLNWENPEVRKAVYKMMNWWMDRGIDGFRMDVITLISKRLDGHGRLPG EIDSELSEGEMGEEGYTDASPFCSDGPRLDEFLAEMRREVFEGREGYMNVGEAPGITPAR NEFITDPAHKELDMLFLFDHVGIDQEGSKWNTVPFEVKNLRARLADQQEAVKNAGWASLF FCNHDQPRVVSRWGDDADRESRELSAKAFGMLLHMHRGTPYIYEGEELGMTNAHFTTLEQ YRDLESINGYRQRVEEAKCQSAESMMAALALIGRDNSRTPMQWDASRYAGFTAPDAATEP WIGVNPNHVEINAAEEFDDPESVYTFYKKLIAMRHNMPIIAVGDFSPMDAGNDDVIAFQR HLEDTTIMVICNLSSKKATISESLRINDNKQQVLLSNYSTAHAFKSMHDGVLDPWEAITV QL >gi|222441571|gb|ABXX02000002.1| GENE 327 379545 - 380477 1149 310 aa, chain + ## HITS:1 COG:BH2725 KEGG:ns NR:ns ## COG: BH2725 COG1175 # Protein_GI_number: 15615288 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 29 296 11 280 290 130 34.0 4e-30 MIKQRSVNQITGIKSSSVRVNRHRADWRGWKFMWPFALVFTFVFIIPILYAIYISFFQKQ MVGGTQFVGINNYIRLFHDQQFWSSVGRVALFTCVQVPIMLFLSAAMALALDSMKLHGAK FFRISTFLPYAVPAVVSTLVWGFMYGAKYGLVGSLNDWLGTNLDVLSPSVLLASIGNIVT WEFTGYNMLIFYSSLSTIPHSLYEAASIDGASEWQIIKSIKLPELKGSLAITVIFSIIGS FQLFNEPSILQNMVPGNAITTYYTPNMYAYNLSFAGNQSNYAAALAITMAVITMAIAYAV QLNSMKEQMK >gi|222441571|gb|ABXX02000002.1| GENE 328 380737 - 381549 1006 270 aa, chain + ## HITS:1 COG:SP1681 KEGG:ns NR:ns ## COG: SP1681 COG0395 # Protein_GI_number: 15901516 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 12 269 30 278 279 134 32.0 2e-31 MCALFAVYCLFPFVYLLINATKTQADFTSTFGLGFGRTFALWDNIKTVFTYQDGIFGRWF LNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFA KLNLTNTPWAMIIPSLVSTFGLYLMWIFSDQAVPTELLEAARVDGAGEFRTFFQVSLPLL APGIVTTALFTIVATWNNYFLPLIMLKDSNWYPLTIGLNQWKDQASTAGGQAIQNLVVTG SLITIVPLVIAFLCLQKYWQSGLAAGAVKE >gi|222441571|gb|ABXX02000002.1| GENE 329 381794 - 383884 2815 696 aa, chain + ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 18 695 9 672 672 389 35.0 1e-108 MHRTFKWPELLTDNGKGIAYGGDYNPDQWSEDVWDEDVRLMKQAGVNTVAVAIFSWDRIQ PEENRWDFGWLDRIIDKLGKAGIAVDLASATATAPLWLYEKHPEVLPQDKFGHPVNAGSR QSWSPTSPVFKEYALTLCRKLAERYGTNPYVTAWHMGNEYGWNNRYDYSDNALNAFRLWC ERKYGTIENLNKAWGTTFWGQEMNGFHEVLIPRFMGADSMVNPGQKLDFERFGNDMLLDF YKAERDAIAEICPDKPFTTNFMVSTDQCCMDYADWAEEVDFVSNDHYFHEGESHIDELFC SDALMDSLALGKPWYVMEHSTSAVQWKPLNARKRKGETVRDSIAHVAMGADAINFFQWRA SAFGAESFHSALVPHAGEDTKLFRQVCELGAALKTLGDAGVQGAELEQSDTAILFSAESE WATRSETLPSMKLNHWHDVRDWYRAFLNAGTRADIVPLKYDWSAYKTVVLPTVIMLSAED TQRLADFAAAGGRVVIGYATGLIDENFHTWLGGYPGAGDGLLREMLGIRGEEFNILGAEA EGEPSEIRLSSGAVTRLWQNDVNVDGERAQVLATYEGEEADEWELGGTAAITRNPYGSGE TYFVGCDLNVADLTEFVRENIVEDSANVANPTDSDVLHTVRKSADATFDFYLPRGKKEIA LQGIEGEPIYLFQAEAEEQTGSYTVHRNGVLVVKRA >gi|222441571|gb|ABXX02000002.1| GENE 330 384026 - 385102 1073 358 aa, chain + ## HITS:1 COG:CC1137 KEGG:ns NR:ns ## COG: CC1137 COG1609 # Protein_GI_number: 16125389 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 4 335 2 324 341 132 32.0 8e-31 MGESKPEPKPDKKRVTLRDVAEEAGVSLKTASNVINHSGRMTDSTREKVQEVIDRLGYRV NVSARNLNRGKTGFITLAVPTLTAPYLSELANRVIDAARGYGYSVYVTTYAEGSAQGAQS LLRNFNTTVSDGMILSISEVENLEAADLDVDYPLVCVGARSTHGKADHVTPDDIQEARLA AEYLFDHGATRLAVVGSRTEPEHIDSVREAVEGNAQLRLRGVLEACAARGAAFDSRLVMS TGQDWTIGSGARITQQLIDSGIPFDGIVAFNDQLALGALFTLAANGISVPEQMQVIGFDN IEEAAYFQPPLTTMDSCLDWIAPTAVSRILDRIDGTRVLEPSYITTQSHVIARATTRV >gi|222441571|gb|ABXX02000002.1| GENE 331 385580 - 386911 890 443 aa, chain - ## HITS:1 COG:Rv0924c KEGG:ns NR:ns ## COG: Rv0924c COG1914 # Protein_GI_number: 15608064 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis H37Rv # 48 441 35 428 428 366 52.0 1e-101 MNSTDDANDMDGMGGMVNAGATDGVECWETARANHDFSSRHGHALAGMLGPAFVAAVAYV DPGNVAANITSGARYGYLLVWVLVLANCMSVLIQYQSAKLGIVTGKSLPEILGERLGDGG RFMFFMQAEVIAIATDLAEVIGGAIALKLLFGLPLFIGGCIIGIISTVLLIFQKSATHHI FEKLIIALLLVITFGFIAGLFIDPPNPAQVLQGLVPHFKGTETVLMATSMLGATVMPHAI CLHSTLVNDHYVPGEPKPSVKTLLHGSKIDVFWALLLAGSVNLALLILAANSLHGMTGTD TIEGAQQAIQHVLGPVIGTIFSVGLLASSLSSTSVGTYAGAEIMHGLLRIKAPMWACRVV TLVPALVVLWFAKNPTEALIIGQVVLSIGIPFAIIPLMKYTHDRSLMGDYVDGPVKFAIN MVVVSPIVALNVILVILTLSGRS >gi|222441571|gb|ABXX02000002.1| GENE 332 387158 - 388012 1009 284 aa, chain + ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 7 282 23 293 294 253 47.0 2e-67 METFHTPMVTLNDGNLIPQIGLGVLRIDDEGVTPVVESALEAGYRHIDGAAGYNNEAGVG RALNNAGFTEGEQRKNLWVTTKLRDSEQGYDSARKAFDRQLGLLQLDYVDMYMLHWPTPF DWRSSETWKAFQEFRAEGRVRTLGVCNFLPEHLDRLHEETGEYPAVNQIELHPTWQQREV VDYCKAHGIAVEAYSPMARGADLNAGNGAIERIAAEHGVTPAQVILRWHIENGTIIIPKS VHADRQKQNLDLFGFVLTPEEHAAIDALDGPTRAGHDPMTFTYA >gi|222441571|gb|ABXX02000002.1| GENE 333 388053 - 388859 803 268 aa, chain + ## HITS:1 COG:no KEGG:BDP_1901 NR:ns ## KEGG: BDP_1901 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 23 268 4 249 249 402 78.0 1e-111 MPRKNNRNSYNYRNIERDVRDIQRAGKRFKKSWINADGPLERILILLVVVAVIGVTIGML LPKVNPTVGEITGEYTATGTAAETLEKLTVDDNPSKAGYDRDAFGFRETDDDGNGCDVRE DVLARDLTDVQYKNGRSCQVASGTLDDPYTGQTIQFVRGVKTSSAVQIDHVVALENAWQS GANTWDHAKLYQFGNDMYNLLAVDGPANQQKGSASAAYWLPTNSEYRCDYVARQIGVKDK YGLTVTSQEKRAMLSVLHGCPAQELPES >gi|222441571|gb|ABXX02000002.1| GENE 334 388870 - 390156 660 428 aa, chain - ## HITS:1 COG:PA4929_2 KEGG:ns NR:ns ## COG: PA4929_2 COG2199 # Protein_GI_number: 15600122 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Pseudomonas aeruginosa # 237 424 9 183 196 98 32.0 3e-20 MTVRAMFHICMELWGIFICLICAGGIFIATPHKTRRTRIKILMQIACMLLLGTDALSWYF RVDADETAYYMVRISNFSVFCINYIFMSFFATYVWLTVSKHQHRKPAALRAVYALSVIGI LLLIITQFTGLFYYFDDHNLYHRGNFYLLSQAIAVLGIALCLFMLISYRKNLDRIIFLSM MSFFVLPVLATIYQALAYSFSLQCLAIVISTQIMFVMDTVEMNMRFHSQQAAYEKARYEA EHDGMTGLLNKEAGWKHMRKYFDRMDSHDEAMLMFVDIDDFKTINDTYGHTVGDFWIREV ASQLRHIYRQDDIICRYGGDEFLALIRNTASEQVLETTLGMFFQQLARTSEQHGQDVHCS VGVCRIAAADGASLGTGRADGDAIGSVDFDQCVAQADLALYETKRFNKGTFTVYNYDRSQ PAPANIRA >gi|222441571|gb|ABXX02000002.1| GENE 335 390074 - 390241 90 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIPPAQIRHMKIPHNSMQMWNMALTVIILHPPPPSDAACVENLPTSFVCHDTSK >gi|222441571|gb|ABXX02000002.1| GENE 336 390352 - 391893 1173 513 aa, chain + ## HITS:1 COG:SA2142 KEGG:ns NR:ns ## COG: SA2142 COG0477 # Protein_GI_number: 15927932 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Staphylococcus aureus N315 # 30 455 142 556 643 255 36.0 1e-67 MSAKRSMSRALTREESYQDGHLTRTAFISIAILTFITFVGNFTQLQLSAALPTIVSDFGI SVTTGQWLTSIFQLVMGVMVPLTAYLTRRFSTREIVLVSMVVFTIGSLFAWLGPTFLMVL IGRLLEAVGTGVMWPVLQITVFSIYPLSRRGFAMGTVGMAMSVAPAIGPTLGGVQTDLNG WRSIFLTLTIIGVISLLLAYFGLHNFGENDKTAKADFFSVGLSIFGFGGLMFGFTNIESY SFVNPMVWLPMVIGVVGIIWFVLRQIHGARRQIENPEAQPPLLNLSVLKNRSFTVGTITA ALSFFAFSSIMVIMPLYIQDCRGYSAAISGLVMLPGALGQCISQFFGGKVLDRFGARPVA LIGTITLCFGTVMMSLISMTSWIWWVSIWQFVRQIGMGFVLMPITTWSLNCLEPEEVSAG SAVTNTVRQIAGAIGAPVLVILMETFTSLRWTALGGTKAVYAAANVFGIQWALRISAAIC FVMVLMVFFGVRGQGAGSTHETVQRALNRRRAA >gi|222441571|gb|ABXX02000002.1| GENE 337 391912 - 392235 448 107 aa, chain - ## HITS:1 COG:no KEGG:BDP_1898 NR:ns ## KEGG: BDP_1898 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 3 107 5 109 109 113 76.0 2e-24 MSEEAMREEVAQAVEVAANKAAEEEISKLAEFESAIDETLASGYLDDTLTVTDADGVAQV LPVLDSEPISHLVEGLEAVGGSANVFVHTSAGVVALSVVEYKPNEEE >gi|222441571|gb|ABXX02000002.1| GENE 338 392536 - 393552 607 338 aa, chain + ## HITS:1 COG:no KEGG:BAD_1391 NR:ns ## KEGG: BAD_1391 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 8 337 53 396 397 451 65.0 1e-125 MTRLGDVQRSETRRETRASLLTALLWFASAVIVFAMLLRMLPNSLDGKRYVPLIVALMPW LGLLSVIIAIIATVFRTVGKRKLLVALSVLCVIIQIIWHWGYVVPTNDRAIQPSATVRVM TFNTKQGCADAQQIVRTIQSEHVEILAMQEVSSGLLDRLHDAGIEDHLPYSVSAQLTWHD NGGVNVLYSAHPLQETTQDLIPIESSSIPAATVDFNGRKVRFGSVHPFSPRPSNQGLWNK SLDSIAQLQHYDNGESYVLMGDFNSTWDHASFRYLLGDRFTDAGESAGEGLHMTYPSVFP IAEIDHIIYDKGVYARNLETKRIQGSDHKALLATLELQ >gi|222441571|gb|ABXX02000002.1| GENE 339 393568 - 393693 118 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLTEQKRGNNGGVTTQMLPVTQELMQPKRDLQTSIATTQA >gi|222441571|gb|ABXX02000002.1| GENE 340 393761 - 395683 1956 640 aa, chain + ## HITS:1 COG:no KEGG:BAD_1390 NR:ns ## KEGG: BAD_1390 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 14 640 31 657 657 800 71.0 0 MNGASDQPEEFGVQPEQGRQEEPQSNADSTSDATASPEDSTSSAPHSRRVRRRMSAEHIR QIKRKRRRRKILIGVLVVVAALAVFAGAFVWSALHVKNELQQAVSSAQGLQQTISEADTS KLEKQTTAFSDHVSKAYKQTSSPLWQVASVVPYVGNDISAVRTTVAAMENISSQALPQLV KVAENVDLNSIHVENGTIEISGLEASQQPLQIADDTIDKATREVKTVKTPHIAQIADALK TAETYCEKLDSMVHSLNSIVQVLPSMLGTESHANDAPRNYLILAQTNAEVRPSGGLTGSL GLVTVQGGHVSLQPFVSDSEIQNADEPVVDLTAEERLLFTDKLGKDIRDVNFTPDFPRTG EIVSAMWARQYGVAVDGVIAIDPLFLQNMLAVTGGVAMPDGSTLDGTNTAQTLLHDVYAR MAPQETDEYFAVAAQAAFDHIMQNVDDFKSYVKALSTSVEQGHVMVWSAHEDEQDLIADS AISGKLITEGAKPQVGVYISDETESKMDWYLHREVTTEFQKVARNGANQYTVHIKLQNTM TAEEAASEADYVTGAGNIVPKGQIKTALFIYAPANGRLVDWEFQNADDYKGVTLHDGLTV GVGDVTLQPGESYEITVHVQSAPDTDEPLTLRQTPLIEGR >gi|222441571|gb|ABXX02000002.1| GENE 341 395989 - 397656 1561 555 aa, chain + ## HITS:1 COG:CAC3073 KEGG:ns NR:ns ## COG: CAC3073 COG2148 # Protein_GI_number: 15896324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 358 549 26 216 222 206 52.0 9e-53 MQGGFRSSEQGSDQVVRTQEIHIVSSNSRHQDQKQERHQSQDNSPQFEPMMFSNTPFSVG EDGKRKGRRNQVVPAWRYSFVVCLVMVDLAVMLISLSISLWANDAAYNAINGAMPFWLFL ICFSLIWVLSLTFAGTYHRHVMAEGYELYAKIINASLLTIITYCSLAFIFNLSLPRTALI VAPIIAFFLEVIARWQMRQWQHRSRQKGACKYKTVVIGSSDGINCALRTMRDYSNWGYSP IAVCPIEADDNEKDAYVVTSFEPDPSIEGADKLKVIPFNAAFPRTCESLGAQEVYVADVL SRDSEMLHGISLAVESLGMELALAVSLADVSGHRLYLRNTAEQPVLLASLPQYTNTTYVI KRLLDIVGSAFALLISSPLMLGTAIAIKLDDGGSIFFSQQRIGLHGKPFTMYKFRSMVTN AEELKKKLAEENGQTDRFIFKMKDDPRITKVGRFIRKTSLDEFPQFFNVLKGDMSLVGPR PALPEEVARYGSLYSARLLVKPGITGPWQVSGRSDLSQEQSEYLDVSYIENWSIAGDLAI LAKTVLVVFRGTGSY >gi|222441571|gb|ABXX02000002.1| GENE 342 398127 - 399461 764 444 aa, chain + ## HITS:1 COG:no KEGG:BDP_1863 NR:ns ## KEGG: BDP_1863 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 40 420 28 382 422 239 44.0 3e-61 MRSHEKRVNVCPRTQGKYLVSVVLTAVFAIASLFGTLLFSADAVADVAESQAVAQVGNAT YASVQEAIGRTTLKNTTVTLLADVTESVTITPPKGVRNVTFDLNGHTLQAAESGGAAGFA TITVPANMQLTIVGPGTVAGGTQPAVDCRGVLRVEGGTFTSDATLMRFAETDETSAQGSF SGGTFTAPTLFNLLDDAKNLGYVTVRGGEYRGMIPAGLNTLALLSGSFSDLSNLAPYLAD SLGLIPGGTSGDGMGDGMFHVGDLAISSKQTSVELDPASGLQQLSADDLLELTETQLNGI ADYRLVVDSDQLQALNDQIDRAMQAVEKRKAFEAVSQNITITAVRNGADDVIDTNSSGGA GPQLRTSDHDGISAQVAVTIKAVAEPEKPEEPGKPGDPEKPEKPEMPRSGSAVQALAIIS LLLVIASAICAYATVHLQSSRLHN >gi|222441571|gb|ABXX02000002.1| GENE 343 399845 - 400102 107 85 aa, chain + ## HITS:1 COG:no KEGG:BDP_0068 NR:ns ## KEGG: BDP_0068 # Name: not_defined # Def: abi-like protein # Organism: B.dentium # Pathway: not_defined # 1 50 1 50 313 83 70.0 3e-15 MHKPFTTIEDQIALLNSRGLQTDSRTSWILEREGYYATVNGYKKPFLDNQARKKMKKTNI AKDPHTMTCISCTCLIGSSVFSFSE >gi|222441571|gb|ABXX02000002.1| GENE 344 400099 - 400785 175 228 aa, chain + ## HITS:1 COG:no KEGG:BDP_0068 NR:ns ## KEGG: BDP_0068 # Name: not_defined # Def: abi-like protein # Organism: B.dentium # Pathway: not_defined # 1 226 86 311 313 325 69.0 1e-87 MITIAEAILKTVCAYEFTKANPAEKNPYLNIDNYARTGQAHEKASQLIPRLQKILTDNSD CERKGRKEYLVHCLNEHDGEVPLWVLTNDLTLGQIYWFFQSQNILIRGSIARSFTVLYGD SHRHKTEIDAQRIDKIYRRMKDFRNICAHDERLYCAHPHDSNNTVFQLVKDLRFVIDKKR YLEFLQQFNSLLMHLGEDIPAYVDSVYREMGLDFPRELHEWMELARTS >gi|222441571|gb|ABXX02000002.1| GENE 345 400898 - 401137 110 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MATHLWWCVLWFLASVPVHMQVRYGSKPEFFPYDLDVSCCLHVWGVCLVIFVSDFSIDCC CKIEVRIRRRCGLRACRWP >gi|222441571|gb|ABXX02000002.1| GENE 346 401321 - 402241 892 306 aa, chain + ## HITS:1 COG:no KEGG:Blon_2087 NR:ns ## KEGG: Blon_2087 # Name: not_defined # Def: proline symporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 5 306 8 309 358 400 72.0 1e-110 MFMILAHHFVVHNGYDVKNLSLGPERIFFQLVMQGDGKVGVVIFFTISAWFFLDKEQTIK SNLKRIWILEREVLFWSLALMAFFLVFDRADFGMKTIVRSVAPTIMGMWWYVTAYATFLA LLPFLSKGLRAFGEHMHYALAITVLAIWGLTSFIPGTFGVNDSVFGFIYLFILISAYKWY MKPFTLKQTWLMTGTGLGFFLLYTCASVMLSLFGIDKGIFIAGSFKLPVIMVGFGMFLLF DPLSFRSRIINRIARSAFAVYLITDYPATRTLLWKHLFVLENLYQQPFAILQILGILLTI YLVSAL >gi|222441571|gb|ABXX02000002.1| GENE 347 402540 - 402866 160 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351656|ref|ZP_03742679.1| ## NR: gi|225351656|ref|ZP_03742679.1| hypothetical protein BIFPSEUDO_03253 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03253 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 108 41 148 148 179 100.0 7e-44 MLCAAMLGFASSLMLCIAIDCRLLQFLGRASLTIMCVHEPVKRVLIFVMAKILGMNTDAL RANLVYAMLVTVVTVAICVAVHLIMDRFAPVLIGSSRHNLASQGKARA >gi|222441571|gb|ABXX02000002.1| GENE 348 403005 - 403172 151 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351657|ref|ZP_03742680.1| ## NR: gi|225351657|ref|ZP_03742680.1| hypothetical protein BIFPSEUDO_03254 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03254 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 55 1 55 55 77 100.0 3e-13 MALALVSFLSIIVMWSLDLPVDQFRLPWAFDILSFSMLFYCIGYLLSEFILPHVQ >gi|222441571|gb|ABXX02000002.1| GENE 349 403034 - 403660 119 208 aa, chain - ## HITS:1 COG:CAC3042 KEGG:ns NR:ns ## COG: CAC3042 COG3594 # Protein_GI_number: 15896293 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose 4-O-acetylase and related acetyltransferases # Organism: Clostridium acetobutylicum # 7 134 3 130 337 70 36.0 3e-12 MRRLYSRLAALDSLRGFGILLVVLGHTSWSAGLVSWIFSFHMPLFFIISGMLFHERQFLD SFKRRAIRLLVPYVFFGTVTLAYWALIERRLRGDEGSVPNALANIVLARAGSDNYPQNAA LWFLPCLFVTEMLFLGFFLLVNKAGSVETKTVMGGAGVIGLPSWRLPWSVSFRSSSCGPL TCRSISSDFRGLLISCPSPCCSTASVTC >gi|222441571|gb|ABXX02000002.1| GENE 350 403802 - 404530 488 242 aa, chain - ## HITS:1 COG:no KEGG:BAD_1380 NR:ns ## KEGG: BAD_1380 # Name: not_defined # Def: putative O-antigen polymerase # Organism: B.adolescentis # Pathway: not_defined # 1 242 111 352 352 336 85.0 5e-91 MPCSKVLLTVSFLCGGYFLYSFNVVRQTIATALFCCALLFVERNMDGKKRLQSLFAAFFL VAIAVGFHYSALIYFVVITLLYLKLDKKIYLSLFFASAVLVPTFVAVIGILLKGTKYENY ISGYWPDPSKAFSLSSLLFVGFFFVYLFTESKEDDHWFNIFRNLHFIGSIAIMIGLFIPL GQRVSALFYLLNFLSIPYYIEYYITEKNKMLIKILYLSFCFFMFLHTLAVNGNGILPYHF AI >gi|222441571|gb|ABXX02000002.1| GENE 351 404968 - 405213 159 81 aa, chain - ## HITS:1 COG:no KEGG:BAD_1381 NR:ns ## KEGG: BAD_1381 # Name: fhiA # Def: FhiA protein # Organism: B.adolescentis # Pathway: not_defined # 1 81 1 78 78 77 61.0 1e-13 MDALSVFVTTSLLKAGAQVAGLPLTLNLLLTAYVILRHPNRTLLMMKRFRGLAVAYGALF ASGLPYMSQGRMSLDMYGNGL >gi|222441571|gb|ABXX02000002.1| GENE 352 405289 - 406308 562 339 aa, chain - ## HITS:1 COG:no KEGG:BDP_1841 NR:ns ## KEGG: BDP_1841 # Name: not_defined # Def: nitroreductase # Organism: B.dentium # Pathway: not_defined # 4 337 2 335 337 332 48.0 2e-89 MNWKSTVEQWMPKPLIAPLKNLRQSIHLYQDSWAQAKRFNRSYSRIMPHERVRIETRVMF LSHQIEKGLSHHNFRYGFGKKVFNELPTLLTRLEQADLNFANNTVYKESLAALHEYMQRH LDAEKDISWQQSLFTTDQWQHIMNAESNDGGSISIRKSDKLNNKDLSFAALSENRHSVRE FADEPVSLDELNQAIQMAMRTPSVCNRQPTRVHVILDKEVIAKALHIQGGVNGYPAPPAL LMITSDLRAFMTSYERNEGYTDGGLFGMSLLLSLESLGIGACPLNTMFTATAEKKTRKLL HLPDNEVPVMYIEVGHFLDETRTCRSTRFQGSDITSVLQ >gi|222441571|gb|ABXX02000002.1| GENE 353 406333 - 407436 882 367 aa, chain - ## HITS:1 COG:no KEGG:BAD_1383 NR:ns ## KEGG: BAD_1383 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 6 367 3 364 369 643 88.0 0 MKDSITSYTITCSRPTNYGAVLQTYGLNTALRKMGVDAKVLDYNPKYYYTSTRPLPIRML RAIVRFPDLVKGRKVFGKFLEDYIPMSAKTYRTLAEIEADTPQSDVYICGSDQIWNCKNK LNGKDDAFFLSFAPAGARKVAYAASIAMPEIPDDQKDRYRRLISDFDAVSVREPSSVPML EDLGISNVQSVIDPVFLLEKDDWNVIADASDFTPTEDYVLVYGYNRQKDVYAYARRLAKK LGVKVYTIGTAIEDYTLDQDRYFWNASPNTFVNLIRNAKAVVTNSFHGTVFSIVYNKPFH FFTVKQTTNSRMLDLLDSLALKDRHVTSGDLLSNHIDYTQPNTLLASLRKQSLAYLHSSV SEPLNQH >gi|222441571|gb|ABXX02000002.1| GENE 354 407463 - 408017 100 184 aa, chain - ## HITS:1 COG:all1011 KEGG:ns NR:ns ## COG: all1011 COG0110 # Protein_GI_number: 17228506 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Nostoc sp. PCC 7120 # 2 93 102 191 192 61 39.0 8e-10 MIEIGDNVHITADCSILQHDYSWAVIQRLTGEVLGSCGTVRIGNNVFVGQKSLILKGAEI GDNTIIGAGSVVTGRLDGNAVYAGAPAKKISSLEAYIDKRRKLQLNEAVLLVREYEQTYG KRPPKKLLREFFWLFEPRNTQLDEVFQKVFQLDNNTERSQQAFVQSEPMFSSYEAFLKYV ESNS >gi|222441571|gb|ABXX02000002.1| GENE 355 408177 - 409214 257 345 aa, chain - ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 19 345 5 325 328 155 31.0 9e-38 MSTNPSAMPEKTRTEDLPLISVIVPVYKVERYLDRCIQSIVDQTYRNLEIILVDDGSPDA CPDMCDAWAARDCRIRVIHQENRGLGAARNSGIRISTGELIGFVDSDDWLEPTMYEVLYR SLTKENADTSMITGVLEYPNGRQIYLYHPDLHLVMTTSESFKYINLPGYSTISAWSKLIK RSTLGNIRFPEGCTGEDWQFTYDILAASVRTTFDSTPQYHYRQVAGSLSNTSTNFNFAGY EATKNMVKLVHQKFPEQLPFALYGQMRSMVSLYDQALVTGHAKEQQWRDFAEDTRTFVNQ NMKAVTESVTLPRGRRLQLKLMAISPTLYGVFFLLHKRIHPERSK >gi|222441571|gb|ABXX02000002.1| GENE 356 409211 - 410557 971 448 aa, chain - ## HITS:1 COG:MA4461 KEGG:ns NR:ns ## COG: MA4461 COG2244 # Protein_GI_number: 20093247 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Methanosarcina acetivorans str.C2A # 3 372 26 401 490 70 24.0 8e-12 MAFILMPLYTLYLSTEEYGIMDMATIMVTTLFPVLTLLISEGMLRFTLDDKSKAAFYITE TMLVMLASCVLLAIILPVFDLPIFGGLGRYKIWFLLSYAALCFPSVMGTVARAMDQMKLI AYASILSALIMGVLAYALIAGMNLGLMGYFYSYIVGNGSAILVYLFAGKQYQFIDFTVWR NNASLRKQLWRYSLPLAPNSLCNQIQTTVSRFIITGVLGISASGLYAAASKIPNLLNVLQ QIVQQAWQLSTFQEFKSSGLKHFYDVIWRVYHALMSVGSALVITLSPFIARVLMQRQFYS AWPLISILVLAFYLSAINNFLGTIYQAYMRTKPLLVATVVGAAACLAFTAILVHDWGISA AAFGVFVGSLVIFVVRVIDVRRLMAINMRPIPTAITMTLLTVQSLVTSNQCNHYLFWSSI CLLLIAFVQCYELKPLITLIFTRRKYTA >gi|222441571|gb|ABXX02000002.1| GENE 357 410469 - 410630 100 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVTMMVAMSMMPYSSVDRYRVYNGISMNAISLVATALSPKMPTLTSRFLYLPT >gi|222441571|gb|ABXX02000002.1| GENE 358 410631 - 411920 929 429 aa, chain - ## HITS:1 COG:BH2305 KEGG:ns NR:ns ## COG: BH2305 COG0438 # Protein_GI_number: 15614868 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Bacillus halodurans # 112 414 70 362 502 103 28.0 7e-22 MGGNAVNPRVAVITSGYLPVPNVLGGAVEALDMMMVQENEKTPNFDFTVFSSWAPGVDQI VGEGNFKHTDFCFIKTPLLVRAADRCIYWAAKHVLHKKKLMSYRYIAQRLWYINKVSKKL AQPAKNGGPAFDKIMIENHATLFMTMQKHGNSERYAGKVYYHLHNEVLNDFGCIKEISKV KKVLGVSKYIVGTLDTYLREHGEPGLRENQKAVWRNGVDTSRFGSEEANSKAIEFRKKFN IAENDIVFLFSGRLTPEKGAEELLKAFTEVAQKVPNAKLVVAGAFFFNSNIVSPFEQKLR DLASNPVVKDRIIFTGFVNYEDMPAIYAMADICVLPSIWDDPAPLAVIESLVSGKPLITT RSGGIPEYADGQSAIILERSDQLVDQLADAMTKIARDSDERDAMGAHKTALRSEFNKETY MAQLAIRLR >gi|222441571|gb|ABXX02000002.1| GENE 359 411902 - 413023 509 373 aa, chain - ## HITS:1 COG:SP0353 KEGG:ns NR:ns ## COG: SP0353 COG0438 # Protein_GI_number: 15900282 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 359 2 363 372 238 37.0 2e-62 MPIRVAQVMGKMLGGGVESVVMNYYRHIDRSKVQFDFLVDADSTRVPEEEIKALGGRVFR IPPYQHPLRYRKELVRLFHEEHWPIVHSHINTLSVFPLSAAKKAGVPVRIAHSHSTMGKG EFAKNLMKLALRPLSNLYPTECFACSEYAGKWLFGRDADFTVIPNAIELEKFHFDPVLRQ ETRKELGIADGMFLIGHVGRFMPQKNQAFLVDVLAELLPQKPDTILAFVGDGPDRPDVQQ HAQELGIGDHILFLGQRTDVNHLYQAFDAFCLPSRYEGLGMVAIEAQVAGCPCVLSNQVP HEADISRKTSFISLENKSSWISTVLNISSQTANRQIETSNTCAEKYDISASANRLTSLYV SSAESANGWEETL >gi|222441571|gb|ABXX02000002.1| GENE 360 413089 - 413316 94 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNPELVFFKRNAKRAGTAKPRSLSAKVDFYIPLRHTQPPITHFGGILHGFSMNTLLVRDL KTVFGICFSRFSGRF >gi|222441571|gb|ABXX02000002.1| GENE 361 413487 - 414623 1001 378 aa, chain + ## HITS:1 COG:alr3058 KEGG:ns NR:ns ## COG: alr3058 COG0438 # Protein_GI_number: 17230550 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 2 375 13 381 408 240 36.0 4e-63 MVSIVMIGHKRIPSREGGIEIVVDELATRMAAKGHKVIAYNRKGHNVAGAEFDGNVHSAN KPFVYNGVRVVPVPTFEAKGLAALTSSFFATLKAIAAKPDVIHYHAEGPCVMLRLAHWTG IRTVATIHGLDWQRAKWGKFASTYLKFGERTAVKCADEIIVLSESMRQYFQEKYGRGTHF IPNGIEYGEPVSAQEITEKYGLHKNDYVLFLGRIVPEKGVHYLIEAFNKLNTNKKLVIAG GASDSNEYYQHIQQMANQDSRVILTGFIQGQALKELYSNAYIYVLPSDLEGMPMSLLEAM SYGNCCLTSDIPECAEVVEGHAATFQHGSVESLREKLQELLENDDLVQRYKANAADYIVS KYSWDDVTDQTLNLYGGE >gi|222441571|gb|ABXX02000002.1| GENE 362 414626 - 415993 1130 455 aa, chain + ## HITS:1 COG:SMb21503 KEGG:ns NR:ns ## COG: SMb21503 COG0438 # Protein_GI_number: 16265081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Sinorhizobium meliloti # 2 407 5 370 447 236 37.0 8e-62 MRILLVNKYFYRKGGAETYFFALSEGLRALGHDVAFFSMQHPNNESSYWSKYFVSEKDYV GDISAFKKVQEASTLIYSFEARRKFEALLEEFKPDVIHMNNVHRQLTLSILDAPYLKKHH VPVVYTAHDYILVCPAYTMVNGHGEVCDACLDKHFMHAVKNVCVKGSRTKSALATMEAEF LKFHHAYDKIDLIVAPSKFMKSKLDEGGFAGKTVAMQNFLTDSQMAMGARVANTHKFEDA QSGARPYFLFFGRLSKEKGILTLVKAFLWATGLANGSADMRSSDQDVQVLPDAWDLHIVG DGPEREAIEQLIASAGPQAESRIHLLGYKSGEDLQREVGNARFSVLSSEWRENMPYSGLE SLAAQTPIIGASIGGIPELVEEDKTGFTFESGNITDVRDGLLKAAAVGQSAYGVMQHQCA EYVAAHCRQQAYAKQLERKYFGLTKLRSKNQGEER >gi|222441571|gb|ABXX02000002.1| GENE 363 415967 - 416191 139 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNFNARIFSSIFICYRSTTVRATIINKDDFNVFKRLNLNAINTFLQKRFNLIYWNDNTD FRIIHHLSLLSLIL >gi|222441571|gb|ABXX02000002.1| GENE 364 416201 - 416398 79 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRFDSSDTPIDHVTVTSDNNIRIALRRGIIKATVHCGSNPVIGIYEADIFTSRIGNTSIT CRAKT >gi|222441571|gb|ABXX02000002.1| GENE 365 417049 - 418056 524 335 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0369 NR:ns ## KEGG: BLLJ_0369 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 46 334 1 289 292 403 64.0 1e-111 MAVGHNSIQRIVHRVGEELRSTKEIASYTSWNDALETFHAKWDIQVMNHNGFAEPPAVRD RLIRKHEIMLKYFEQRYGDFYRNYDYDAPMAPVDPDMEGRIWICWWQGLENAPEIVKCCV ESICHNAGNHQVTIITDQNVEQYIKIPKWVKKKQSEGIISRTHLSDLLRLSLLAEYGGLW LDATFFCTGPLSDMAFGSPMFSIKRPDYLHCSVAQGYFANYSLGCVNKNRWIFRALRDFY LHYWELNDYLVDYLLTDYLIVLAQRHNKGIADAFAAIKPNNPRCDDLYKVLDELYDESYW SKLTEDTRLFKLTWKQSFPKEVHGRPTFYAKLLGR >gi|222441571|gb|ABXX02000002.1| GENE 366 418064 - 419281 702 405 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351671|ref|ZP_03742694.1| ## NR: gi|225351671|ref|ZP_03742694.1| hypothetical protein BIFPSEUDO_03268 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03268 [Bifidobacterium pseudocatenulatum DSM 20438] # 9 405 1 397 397 625 100.0 1e-177 MVSNRNSAMSGARLSGIVREPIKADTWIYALSFLTVFVDVSSVIETYAYIRYLMLLIVGI FICLKLTVIVSDKNWLSLVPWLVFFAVVSFSSFLSRDDYTSRNPFLAAIVALGGLLEFIA VINYAFEKRRLRSALNVFYVVALIVLLITDVTVYFSGIYLIGNKFRIAYFHVLFVVLFVI RKAFFKNSKSFINQTLFVGLIILTFAICLKVDCTTGINAIVLMIVWFILGRIFPLFVYNP ITASVTVVLSYVFMYIATSFLHITFVANYIVDTLHKDVTMTGRLLIFEVVPKVLSRKPLL GYGYGVSYEVLDFALKGAPDTQNALAEWILYGGYITAIIIILLIALNFKTALTHASTNNV AMLICVAFVYAFICIGTVEISYGMDFFAVLALLRVISLSINQRKG >gi|222441571|gb|ABXX02000002.1| GENE 367 419286 - 420254 639 322 aa, chain + ## HITS:1 COG:no KEGG:BDP_1837 NR:ns ## KEGG: BDP_1837 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 269 1 261 327 178 35.0 2e-43 MKKCALILPYFGKFNNYFPLFLKSCGYNQAYDFFIFTDSTEPYNYPQNVHVVPMTLSEFR TNASQKLGFEPCITTAYKLCDFKPAYGFLFEEYIRDYEYWGHCDCDLVFGNLEKILSPVL DKDYDKIFAAGHLTIYRNNFENNRRFMKSLEGREIYREAFTTNRIYVFDENVKCSMNPDR LNVHTIFRNDNAKIYEKDLSFNVSPKKAKITRTAYNPKTQKFEEDLRYAHLARYYLCSDG LFSASWDKDHVCIRQYLYMHLQSRRMRMSSDIVQSPIVEIRPDRFVKAKFLPSTKTGLQN RFFNVLNWFWIDTYKKRFKEKF >gi|222441571|gb|ABXX02000002.1| GENE 368 420266 - 421003 242 245 aa, chain + ## HITS:1 COG:PM1056 KEGG:ns NR:ns ## COG: PM1056 COG0110 # Protein_GI_number: 15602921 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Pasteurella multocida # 91 140 132 181 203 75 68.0 6e-14 MIKDLFRRLILREKSSSKAFVDYWRGKGVSIGDDTYFYDPQSNCLGLNYPFNLSIGRNVR ITHGVTIVDHGYDWCVLKGRYGDVLGNTGQVSIGNNVFIGMNAIILKNVNIGDNVIIGAG SVVTHDIPADSVAAGNPCRVLMPLSKYRDKRIASQLDEALNLFKTYCASHAGEIPPKEIF REYFWLFESPDKNGICSCEAFDQTMHLIDGSFTLSVNLSKYSKPMFDGFEEFIKYCCSRN CKEKL >gi|222441571|gb|ABXX02000002.1| GENE 369 421020 - 422138 468 372 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_1008 NR:ns ## KEGG: BBMN68_1008 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 3 366 8 376 381 165 31.0 3e-39 MFDKNIYVSTIIDSYNYGTVLQAVATRDVLGPYGKPLFIDYCREAWTHEGLRDIYLKDMN HFLPINIVRYFVALPELKTNKKLFRSFVERQLHLVDANPFIAGSGRFDEQAVYCVGSDQT WNEELNKGIDPVYTLKNVPSDCRKISLSASFGRPSIPDAEAAKMKPLLEQFDAISVRESS SVSILEQMGIKGSVALKDPVLLCRPQLWHELSHSVPKYKDQYVLIYMLNHNQRMIGYAQQ LAEEKGLKVRIVTFSPRKPGSAGCESICQPTPEQWLAAFRDADYVVTDSFHGTCFSILFN KPMIVFDPPRYSVRLTDVLKDFDLSDRRTDNQVAIKDIDTADGEIDWGPVQTMLADFRKV ASEFLDKYFTAL >gi|222441571|gb|ABXX02000002.1| GENE 370 422154 - 423173 494 339 aa, chain + ## HITS:1 COG:no KEGG:BDP_1841 NR:ns ## KEGG: BDP_1841 # Name: not_defined # Def: nitroreductase # Organism: B.dentium # Pathway: not_defined # 9 334 7 332 337 287 45.0 6e-76 MSFKHVIGNIFPDSVVNSLRQIKSSLILRKEYNLQAKRFNRTFSREWSTGLMQVQTRIIF LTHQIEKGLGHREFRYGFGAHVFKALGPELAKLETADSDYLDNPVYRECMSAVHEYIARH EAAGKDISEQRRYLGAEHWERAKQATDENGGSIVVAAAEKADNAQKTFIELAENRHSLRE YSARPVAEEEIVKAVKLATRAPSACNRQPARVLLISDAHQIAEVLKLQGGVRGYALPPQL LLVTAKTSVFMGPNERNQGFIDGGLFSMMLLMSLEAYGLASCPLHAMLDGKTETKMREIL SVPDDEIFVMFIEVGHFPESVRTPQSTRLPMESIFKKAL >gi|222441571|gb|ABXX02000002.1| GENE 371 423189 - 424292 366 367 aa, chain + ## HITS:1 COG:no KEGG:SpiBuddy_0392 NR:ns ## KEGG: SpiBuddy_0392 # Name: not_defined # Def: hypothetical protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 1 365 1 380 381 173 34.0 1e-41 MKTKIEIGIITVNDPKNYGNRLQNYALQQVLRDYGTVSTVNQFLNVSKPNEIIEKRFFAL LRPVAHKVLSLLPSKHALDFKRLYRAEAFTRRYVPCSKLYASTCLIANNIAALKAVVVGS DQVWNDRWISNRVLSARLADMTSDKTKLISYAASFGINQVKDESKPIFKKQLARFSAISV REDQGAKLIGELSGKPATVVLDPTLMVPVEHWRSIVRGFVPRDDKYVLTYFLGEPSAEQE RTIQEYAKKHGCRIRRMIDLRDPETYVAGPEDFVELFSKAEYVFADSYHACCFSILFHRQ FTVFNRAGTKGKASMNSRMETLFRLFELDSVMLDDGLAPEIDYRKVDLLLQQHRTESRAW LDKAMEV >gi|222441571|gb|ABXX02000002.1| GENE 372 424298 - 425812 1140 504 aa, chain + ## HITS:1 COG:MA4461 KEGG:ns NR:ns ## COG: MA4461 COG2244 # Protein_GI_number: 20093247 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Methanosarcina acetivorans str.C2A # 27 481 29 468 490 62 21.0 2e-09 MANQRKAGAVLGYANVIAKNFVNLMYVPLLLHFVGQGDYGVFQMTNSVVFALTLLSAGFS GAYVRFYMREIAHGTRSSVRRLNGIFLLIYLIVVGLCLIGGVILTFNVDLLFSGGLNPRE LVLARELMVLMVLNVAAQLMTSPFNSYITAKECFVYQQTRQLLTTLVQPLLAVLLVWRGM GAIGVALAMLVVTMTLLLMNVVYAVKKLGMRFTFTGLQWSMFKAIAVFSFWIFLNQIFDL VNNNVPNFLLGAMAGSTVVATFSIAVQIRNIFFAMSTTMSNVFIPQINRIVADSNDNKVL TQLMTRVGRYQMIIFWFIYGGFIIIGKFFVVLWAGQQNVDAYWLAVIMVFPVMIPLTQNT GIEIQRAKNRHKTRSVIYVFTAVLDVVLSILLIPSMGYWATAVGYIVSIVLGTGLFMNWY YQTHIGLDMLYFWRNQIPTIIMAVFVTGICLLGTYFVPVNSIMFFLMWGMIYVVLFCIGA FYISLTATERSKALFMLHRKKLIR >gi|222441571|gb|ABXX02000002.1| GENE 373 426088 - 426282 87 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHHPRAQRPEPRLSLDSVGAVGIDVLQAFAHPAGPGGLEPPPLQAAFGLQLGFGQILLFC FNFS >gi|222441571|gb|ABXX02000002.1| GENE 374 426544 - 427383 534 279 aa, chain + ## HITS:1 COG:BH3998 KEGG:ns NR:ns ## COG: BH3998 COG4584 # Protein_GI_number: 15616560 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 2 226 28 255 499 139 36.0 6e-33 MDRATVAKYADMDDMTPKPPTDRRRGSKIDPYAALVDGWLEADRMLPRKQRHTAKRVHDR LRAEIEYDGEYTTTPGYVRRWREANRSGSDGYGELVWAPGVAQIDFGVAKARIAGELVDD HCLVVTFPHSNMRYVTSLPGENAECLCRGPVEVFERIGGVPPVIVMDNATGAGRRNARGE VTLTAVFDAFLAHHRIDAMFCNPYSGWEKGAVENAVGFLRRNLMVPPLEAETHTQLGRIM LDRCDALAASSRHYRRGNAIGVDWQRRVGQVLRGRVPVR >gi|222441571|gb|ABXX02000002.1| GENE 375 427358 - 428110 474 250 aa, chain - ## HITS:1 COG:BH0335 KEGG:ns NR:ns ## COG: BH0335 COG2801 # Protein_GI_number: 15612898 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 20 243 33 256 261 221 49.0 1e-57 MIEHPETERADPIAGDVRAIWRDSRERYGARKIKAALERKGVTASRRRIGNIMHEQGMTS AYARRTFKPHKTRADEARLANILDREFDGYEPRTHLASDLTYVRVGGKWAYVCLLIDLAN RSIAGHSADTSRTADLVMAAFATLDFPLTEVEVFHTERGSEFDNAKIDELLDVFDIRRSP SRKGNPYDNAVVESTNRLLKKELIYRNHYTSLEQLRSDLNDYVWWFNNQRLHSTLGYRSP KEFTEQGLVL >gi|222441571|gb|ABXX02000002.1| GENE 376 428194 - 428481 320 95 aa, chain - ## HITS:1 COG:BH0334 KEGG:ns NR:ns ## COG: BH0334 COG2963 # Protein_GI_number: 15612897 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 8 95 7 94 94 80 55.0 7e-16 MAGPKHPRHYDEAFKRQIVQLYENGKPAREVKDEYDVSHSTPHRWVQGIRNSGSTKAADN RTPEQNELIELRKRNRQLEMEVDVLKQAALIFARK >gi|222441571|gb|ABXX02000002.1| GENE 377 428643 - 429491 242 282 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0644 NR:ns ## KEGG: EUBREC_0644 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 48 279 51 295 297 155 37.0 2e-36 MHGKFVSRLPRLKETASIWGSVSFGVATTLLTFFPKISIIGKDINNSIILFATCVIFGIG ALCQTMFGKKNTIWEKGNNKITAIYGDILDESSKHEEIRVIPVNTAFDTIVDDPCSTDKP LVSPNSLHGQWLRKQECEQEILNNEVLGNMSGKPYRKIDPLQKKRGNCMEYKIGTYSFAR RKNITYLLVALTAFDTNNVAHSTQTDLETVLQSAVSYHNQCGQGAKLMIPLMGTANSRMK LDHQESFDIIKNYLLLRKKDINGCIEIVVYQKDANKVSIWNS >gi|222441571|gb|ABXX02000002.1| GENE 378 429511 - 430077 127 188 aa, chain + ## HITS:1 COG:no KEGG:Patl_2742 NR:ns ## KEGG: Patl_2742 # Name: not_defined # Def: hypothetical protein # Organism: P.atlantica # Pathway: not_defined # 1 186 1 187 189 221 58.0 1e-56 MNYRNGNYSAFYVSEPFDEYSLGARQAHDFCYYSLLGAWKKKDSNFPFIDSHNKTYSVRD GSDWEGTLKPRLHKRLMNSKNIILFLSSITKESRALREELQYGIGVLRLPVIVVYPELEN TNIVDSSRRDFSSSVKRLWDNLPIFKKMMNAVPTIHVPFKKDLIARALSDEEFTVQSESR PGAYFYSI >gi|222441571|gb|ABXX02000002.1| GENE 379 430238 - 430462 89 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAKAVPRDISSRKQDVPAPGDGAASEWLRSYLQESIRPPFGHMASIPGILCQPTFQSLP GRITQVLDHLSRTT >gi|222441571|gb|ABXX02000002.1| GENE 380 430886 - 431332 312 148 aa, chain - ## HITS:1 COG:no KEGG:Blon_2087 NR:ns ## KEGG: Blon_2087 # Name: not_defined # Def: proline symporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 140 199 336 358 231 87.0 8e-60 MAQVSFFLLYTCASITLSLLGHDMGIYITGDWRLPVIIVGFGMFLLFDRATFHNRTINRI AQSAFAVYLITDYAASEKLLWVRLFNLQDLYQQPLAILQILGILLAIYAACTLLDFIRQA LFAVTIDRRRGHWFDLLWDRAFERKTAN >gi|222441571|gb|ABXX02000002.1| GENE 381 431190 - 431813 530 207 aa, chain - ## HITS:1 COG:no KEGG:Blon_2087 NR:ns ## KEGG: Blon_2087 # Name: not_defined # Def: proline symporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 167 36 202 358 281 91.0 1e-74 MAGGGKVGVVIFFSISAWFFLDKEQTIKSNLKRVWIMERELLFWSLILVTFYLVFDRADL SMKLMVKSVMSLSMGVWWYATAYAIFLALLPFLAKGLKALGREYHLALAATVLVIWELTS FIPGMIGINDGFFGFIYLFILISAYKWYMEPFTTRQVWLMIGTGLVFPVVHLRLHNIVAT RARHGNIYHRRLAVARHHSRLRHVPAV >gi|222441571|gb|ABXX02000002.1| GENE 382 431928 - 432020 57 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENNIGMSAKHGMQLPSRISNGGGAEEFQH >gi|222441571|gb|ABXX02000002.1| GENE 383 431983 - 432192 232 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351688|ref|ZP_03742711.1| ## NR: gi|225351688|ref|ZP_03742711.1| hypothetical protein BIFPSEUDO_03285 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03285 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 69 1 69 69 113 100.0 4e-24 MPCLALMPMLFSMSWFFSLTALLWFEFSPPKSYGLRPTEVFPLFWNAIAILVKTSLNPKC KRSAADYEL >gi|222441571|gb|ABXX02000002.1| GENE 384 432197 - 432295 93 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MESAKCYGKSPYGQRLKIIADGEIMLVPNQKN >gi|222441571|gb|ABXX02000002.1| GENE 385 432534 - 432677 57 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTINKPNRWQISNTISLTTDYATDPSSYRLHWLPLRNGKRMAKTIAI >gi|222441571|gb|ABXX02000002.1| GENE 386 432922 - 434103 827 393 aa, chain - ## HITS:1 COG:no KEGG:Apar_0201 NR:ns ## KEGG: Apar_0201 # Name: not_defined # Def: hypothetical protein # Organism: A.parvulum # Pathway: not_defined # 4 348 76 399 460 97 26.0 8e-19 MKTLYLLGNGFDLACGLPSRYSDYFNNRFSVFPGFEKDKPTAVTALEEKLQTNDCHKIPS AWFFIFAYYHDQNNGKCASTWKDVESIIETFTINENDYINLSIGMCADMFAYPRTPTGQE EHVAHLIWLYERLRTNDQFQNTDVDVYNLFLKELKNFESDFQEYLATAVNENIPYRERAD QLFKEITEAQTPIQEESFAIGSVENYASFSSGRDDHYVLSFNFTRPLTNSPTFANIHGSL QDKNAFFGIGGTSQYTEDDDLPNAVRFTKAERSLSLGVTGTNTDLDSVFRALQSPEENLR VIKFFGLSLGEADYPYLKQFFDKSHITDTDSGVNSFLGFYYTKGQARDELVHSINSLLQR YSSDTGHKPIGGLMRELQNTGRLAIEELQVACD >gi|222441571|gb|ABXX02000002.1| GENE 387 434900 - 435406 370 168 aa, chain + ## HITS:1 COG:Cgl0313 KEGG:ns NR:ns ## COG: Cgl0313 COG3600 # Protein_GI_number: 19551563 # Func_class: S Function unknown # Function: Uncharacterized phage-associated protein # Organism: Corynebacterium glutamicum # 17 133 21 141 148 69 37.0 3e-12 MKSIQVANAFILRHGSDIDITNLVLNKLVYFAQVESLRATGKPLFEDKIEAWPYGPVERN VYFTFQKYGRNRILKPEGETAKDEQALSVVDGTAKKYGFLTAFDLVRFSHRKNSAWKNVY REEENVEITNDAILASDDGLTFPKNTLASSLDEVNAKWQNTFRILRNA >gi|222441571|gb|ABXX02000002.1| GENE 388 435399 - 435890 110 163 aa, chain + ## HITS:1 COG:no KEGG:Balac_0578 NR:ns ## KEGG: Balac_0578 # Name: not_defined # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 55 155 56 156 164 87 44.0 2e-16 MPEQYTDEWWHIQAPPLVFPSDDFAEAMTQAIVRVHRKQLDDIGGFTVERANDAGSVSGV VDSTFLPVFGQSSKERFEDLFRQMAHLTFHLAKNHYFADGNKRTAMAISLAILKMERIDL DIDDDPEPERNTLYKLISRLVTEEITEEQFAASLRRSGRLIDE >gi|222441571|gb|ABXX02000002.1| GENE 389 436090 - 436893 731 267 aa, chain + ## HITS:1 COG:no KEGG:BLJ_0404 NR:ns ## KEGG: BLJ_0404 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 260 242 497 747 484 89.0 1e-135 MNQACVHNDTIDVGNHHGWSRYRPRYRPFLQFLTTQERNVIWLLLAIAFLPVDGTTLGLY APFWSPISPALFAVYCLCNWHQLRIAANRYLPMFLLPVACIILSIPGWLKFGIHLNAAFM SITGLLGVLATLGAIAIAFGIKRIPWRTPLRILIASYWFSFGVGVVQWLSIHLHIKPLTD YFAHLMYRQYINESSVWGGGRPQFLFAEPSYIGMHLFGVLLPLMWLMRGRDRIYAKRLRN LIVVYAIGAVLMQAGTRIVLRANLPES >gi|222441571|gb|ABXX02000002.1| GENE 390 436862 - 437071 93 69 aa, chain + ## HITS:1 COG:no KEGG:BLJ_0404 NR:ns ## KEGG: BLJ_0404 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 2 53 557 608 747 100 90.0 1e-20 MFFARIYQSLDPICGLLAHPWTVLTGYGAGNIINAVWAGAKHAGRLLNGLGMNGSAAVGF AAGISNHFG >gi|222441571|gb|ABXX02000002.1| GENE 391 437252 - 437617 380 121 aa, chain - ## HITS:1 COG:Cgl0825 KEGG:ns NR:ns ## COG: Cgl0825 COG3304 # Protein_GI_number: 19552075 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 118 1 120 136 90 42.0 7e-19 MRLIGNILWLILGGLLLATSWAIIGLVLCVTIIGIPLGVQAFKMAGLTLTPFGKTVVYGG GVGSVLANIVWFVLAGIWMAIGYILAGLLNCVTIIGIPFGIQSFKMAKLALWPFGSQIRS L >gi|222441571|gb|ABXX02000002.1| GENE 392 437870 - 438130 64 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351696|ref|ZP_03742719.1| ## NR: gi|225351696|ref|ZP_03742719.1| hypothetical protein BIFPSEUDO_03293 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03293 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 86 1 86 86 161 100.0 1e-38 MAFCRHLIDAAAKSGRYFLAEFFECGAAESKNFDKCHVKLLNICLIESPLQICHNNADRP VEMGKSAECGAFALETDAPHFLCGNL >gi|222441571|gb|ABXX02000002.1| GENE 393 438125 - 440197 1289 690 aa, chain - ## HITS:1 COG:STM0041 KEGG:ns NR:ns ## COG: STM0041 COG1501 # Protein_GI_number: 16763431 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Salmonella typhimurium LT2 # 9 681 7 670 679 654 48.0 0 MSELTFAIDGDALLWTGDGEYLRIEPWGKNSVRVRASKMHEIQEQEGALLPQNNQVSDSH NYGITIDKPNRTAELRNGDIVVQAKASCGLYSGSGYEEPRCLLSFYKADGTPLIQEIPSG GSLNLRARWFKPITGGDYSIVASFTTPENEKLYGMGEYQQNILNLKGCTLELAHRNSQAS IPFVVSSAGYGFLWNNPALGNVTFGKNRTEWRAESAKQIDYWITTGDTPSSIMKHYADAT GHAPHMPEWGLGFWQCKLRYWNQRQLLDVAHGFKQRNIPLDLIVVDFFHWPHMGDFRFEN EFWPDPKAMADDLHSMGVKLMVSVWPQVALASENYVEMKSKNLLVRADKGEDVGMMFEGP SQFYDATNPKAREYVWEKCRTNYAELGVDAFWLDEAEPEYGTYDFDNYRYYAGPNQQVAN IYPRDYNKGFYEGQQTIGRDGDIVNLTRCAWAGSQRYGSLVWSGDVGSTFADLRAQITCA IHMGMAGIPWFTTDMGGFHDGIIDSDNFKELLARWCAFSCFLPVMRNHGDRSLHTATGKE TITNSAGDHRSPSGADNEPWSYGPEMEQIFRKFIAIREKMRPYTRELFESAHIDGQPLVR GLFYEFPQDKSVSDIADEYMFGPDILVAPVVEAGARSREVTLPGNASITWTDLRTGKVYE GGQKITVDAGIDTIPAFARDGHDHGLIGML >gi|222441571|gb|ABXX02000002.1| GENE 394 440234 - 441049 742 271 aa, chain - ## HITS:1 COG:mlr7227 KEGG:ns NR:ns ## COG: mlr7227 COG0395 # Protein_GI_number: 13476021 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Mesorhizobium loti # 23 270 30 280 280 154 35.0 1e-37 MKHRSSWWKTLIGIILTLIMLFPVYWMINISFTQRRSIRSGDLFPKDFTLDNYASALSSQ LPYLGTSLLVAIGCVILTLAIALPSSYAIVFLEFKGSKSMNFLLIVAQMIPAVVMSLGFY QIYNDIGLLDSIPGLIVADSTLSVPFAVILMTGFMSGMPRSLVEAAQIDGASQWGVFTKI VIPLSRNTVVTTSLFAFLWAWSDFMFASTLDSGGGKMRPITMGLYDFIGSQNQEWGPMMA TAVLASVPTALLLIFAQKYVAAGVTAGAVKD >gi|222441571|gb|ABXX02000002.1| GENE 395 441054 - 441971 460 305 aa, chain - ## HITS:1 COG:AGl1012 KEGG:ns NR:ns ## COG: AGl1012 COG1175 # Protein_GI_number: 15890623 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 30 302 25 297 300 175 37.0 8e-44 MSQTITVDKPRRIKPTTLAAIGFAAPLIIYMLIFYVWPLIQNISMSMHRYTRRTFVTGDA PWSGFDIYKEILSDQQFWTILGQTLIFVFASIVFQYSIGLALAVFFNQNFKLSAALRGAF LVPWLLPPMISGTIWQWMMDADSGVINNFLKLFGLDPVWWLQADHSLWAVIIANIWLGIP FNLVILYSGLQNINGDLYEAAALDGCNAWQRFWKITFPLLKPVSMITLLLGFVYTLRTVD IIWIMTKGTGSSRTLATWAYEMAFGKGTSATIRYSEASVVGTILIVVALIFALIYLWAQR NEEKR >gi|222441571|gb|ABXX02000002.1| GENE 396 442067 - 443242 1182 391 aa, chain - ## HITS:1 COG:SMb21595 KEGG:ns NR:ns ## COG: SMb21595 COG1653 # Protein_GI_number: 16264783 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 6 293 3 289 410 89 30.0 1e-17 MIGSNMKRVIALIAASAAAVSLAACGSNSSQDSKTIEFWDPYPQKNDSSTWAKYVTNCAP EGYNVKRIGYAQSDLLNNLTTAVKAGNAPQIALIDNPKMPTAVDAGLVTDIEAAGVDVSG FDKNIEGPGIIDGVQYGVSYGTNALGLYYNPDVLNKAGVDPESITDWDSLNSAIEKVVNA GYKGITFSGISGEEGTFQFLPWFWGAGGQLKDASGSSAEQDALDLVSGWVQKGWAPKSVA TDNQSAAWDLFLGGDYGFSENGSWQMESATEKGYKMISIPAKDGGVAPVPSGGEFITIPA QKTKDSDKMKATAEVIQCLIDGDNLKKTNDEMVYLAAKSDVRKQQVEENSAWAPWVDAVE NAEGRTTDVGLEYEDISAQLSEDLQAALNKG >gi|222441571|gb|ABXX02000002.1| GENE 397 443442 - 444437 336 331 aa, chain - ## HITS:1 COG:SPy1293 KEGG:ns NR:ns ## COG: SPy1293 COG1609 # Protein_GI_number: 15675246 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 328 1 330 339 97 27.0 3e-20 MVTISDVAHAAGVSKATVSYVLSGDPRITQATTLKVQHAIDELGYTVNHAARALSVRKTK TIGVVSPAFHGNYLSALFGLYVYLLSEEATKRGYDTLLIGENDGFEAMHEAWSSKKVDGF ILMDVKDEDPRVSYAAKEHIPTVAFGSPKNSYGLDTVDSDFAKAASSILHFLASEGHKEV ILIPWSHTIFDQGLGYAWRFLDSAIETAKRLDLKMHVEYPKDDDSDPSPLIEHALDTHTK ATALILHNEPATIVAPQVLARRNLRTPDDLQVVTVFPKQLATSMKISFSAVRPDIAQLSE AAVGALLRRINNPKAQTVTRYLDYPLTQEPE >gi|222441571|gb|ABXX02000002.1| GENE 398 444719 - 444859 74 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCLPYVSEMSPVRPPNLPYIDEMRAADKPLRLTPAFNVLFFTRMYV >gi|222441571|gb|ABXX02000002.1| GENE 399 445031 - 446047 582 338 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 2 333 4 331 332 124 29.0 2e-28 MKASIGDVALKAGVSNATVSRTFAHPEQVSEATRLKVQAAADALNFSVSRSAGILKSGRT YRIALLVGSGVIEWFTAEIIAGLNDVLRDAGYDLVIYPIEGSEARDAFFEELPVRSNADA VFVSSFGISPDEVKRLGTAKIPIIGINTTSEGFDATVGINDKEGIKLIVRHLAKLGHRNL LYLYESFSSTLGFSSFNRISGFQEACDAVDGLTARTLAVQKGDSILDAAISEIMAQDNPP TALCFHQDSQAIPLFFRLQRSGLSVPGDISVTGFDDSTFAKEAELTTVRQRPYDMAVDAA QKALALIEGQPIEEPFETFPVQLQVRNSTAKPRTAPLL >gi|222441571|gb|ABXX02000002.1| GENE 400 446319 - 447707 1696 462 aa, chain + ## HITS:1 COG:AGl456 KEGG:ns NR:ns ## COG: AGl456 COG1653 # Protein_GI_number: 15890336 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 56 391 24 363 421 88 22.0 4e-17 MKINKGIAVAVAALSIVGLAACGNSNAASGTTDTKADKGLDVIGNTITYDPNHLVNDGKP IQLEYWSWGSKGTDPVYKMIESYTKTYPNVTIKTVNVSWDDYWTKLPLALKGKNGPAVFN IHNSYDALIRPYAADYDIDTKSLESDYSTASVHEDENGKVKYIDSVINTGNIYYNKTLWS EAGLTDADIPTTWDEFIQVAQKLTKTDGSKMTQAGFNFNGDAYSAIYQGLNYQKGELLFS EDGKKANYNNDVTKENMQFLKDLYDKYKVGSVDFGNDYTQSFGNGQSAMIYAWGHMEGTL KEKYPDIDYGVFATPTFSEDTPFAYDRYNGESTPGVNKNQSKEQQAVAQDFIKYLLANDD YIREAVSELNSFPAKTSLQNDKDILSKPVMAAIQPRVDRLIWPGPAPSTVESSGTTAFQN VFQNGMSIDKALKEAQGQMDTDMKSSDFTSMESKYAYFDEHK >gi|222441571|gb|ABXX02000002.1| GENE 401 447886 - 448773 1000 295 aa, chain + ## HITS:1 COG:SMb21603 KEGG:ns NR:ns ## COG: SMb21603 COG1175 # Protein_GI_number: 16264791 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Sinorhizobium meliloti # 11 287 7 285 291 174 38.0 1e-43 MKNKNGESLVSRIFTLRNMAVVFLVVYFAIFLAYPIFKAFAGSLHNWNPLIGTYDWVGLD NFKQILTDKLFWTSMGNTAVFAGVSTLFRIVLGLGLALLLSAKLVKCKDTLRGLFYMPTI TPLVAVSFVWMWMFDPQFGMVNKITGLDINWLHDTKWAMPAVIIMTIWKDFGYATVLYLA GLMNLPRDVYEAAAIDGANSVQIFFKITLPLLKSTTLFIVITSLISYLQAYVQILVMTEG GPGTSTYTISYLIFDQAFQKYNFGVASAQAVVLFLFTGVLTLIMFKVSGDSEELA >gi|222441571|gb|ABXX02000002.1| GENE 402 448770 - 449591 640 273 aa, chain + ## HITS:1 COG:lin1843 KEGG:ns NR:ns ## COG: lin1843 COG0395 # Protein_GI_number: 16800910 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 2 266 7 269 276 196 41.0 3e-50 MKSRKIGGIILTILLFIAAIITIVPFVWMFISSFAPNSEIVKVTGGLFPKPSTIDNYVSI QEKFNFLRLFANSLIVAVLKTGIAIYTSAVLGYVFSKMRFRGRNLLFGIVMSTMMIPWAV TIIPQYEMFTNWGLQDTYTSLVLPGMISAFGIFLFRQSISGISDELIEAAKLDGASETRI FHSIILPMSHNTIAALAIFTFLWNWEDYLWPFLMITDENKQLLAVGLKAFNGQYGTDYGG LFAATSLAIVPVIIVYMIFQKQFIAGIATGSGK >gi|222441571|gb|ABXX02000002.1| GENE 403 449604 - 452303 2876 899 aa, chain + ## HITS:1 COG:SP0312 KEGG:ns NR:ns ## COG: SP0312 COG1501 # Protein_GI_number: 15900245 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Streptococcus pneumoniae TIGR4 # 88 839 2 661 679 594 44.0 1e-169 MANNALDNATGTVFVDYVRKARPKMRESSVLQGDHWRIGILTESLIRFEWSDSGEFEDNL TQMVVNRDFGADPQFTVTHRDGLLIVDTPALYVTYDGKPFSKEGLSVVVKGVADTQFNTW HYGDEPKHNLKGTARTLDEANGEISLDDGVISRDGWAVLDDSAANVIVEAYEVNGKPNPL GAWVMPRDHAETDFYFFGYGRRYTEAVQDFYKLAGPTPLLPRFALGNWWSRYYRYTQDEY LQLMDRFKREGIPFTTSVIDMDWHRVDDVDPKYGSGWTGYSWDKQLFPDHEAFLRDLHER GLKATLNVHPRDGVRAFEDDYEAVAKRVGIDPATEEAVEFDLTNPDFVSAYFDMHHRMEA EGVDFWWLDWQQGGVTRQPGLDPLWVLNHLHYLDSGRYETSSERNVNENCECEKCAEPGA RDEHEMHVEQSERNVSCTERNNRWPLTFSRYAGPGSHRYPVGFSGDTIVTWESLQFQPYF TATASNIGYGWWSHDIGGHMCGYRNEHLEARWYQLGTFSPINRLHSSNSQFMGKEPWNFS AEVRDSMVGSLRLRHMMLPYLYTMNYRAAFEGMPLVEPMYWADPNNPQAYEVPDEFRFGT ELLVAPIVSDNDDSAQLGSTEAWLPQGEWYDFFDGRRYVSAGESGRRLEVWRAIDRMPVF AKAGGIVPLQQLGEGNKVNDLGNPESLQVLVFPGANGSFTLKEDDGSVASAASGSASAES CDGQIHVADTRMSLDWKNTDNATQFTISPVEGCAEAIPAQRNWEIVFRGVAQPDTQNVRI EIGGKACNTAEITYDQQTLSLSVVVRDVPSTACLNVTIADGLQIAENSVEQDVLDVLLHA QMPYISKEHAMQAIREQGVRALGALRTFDTAPRFSNELFVTSGMPDAVIGALEEILLRS >gi|222441571|gb|ABXX02000002.1| GENE 404 452456 - 453961 1725 501 aa, chain - ## HITS:1 COG:Cgl0343_2 KEGG:ns NR:ns ## COG: Cgl0343_2 COG0489 # Protein_GI_number: 19551593 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 260 459 2 199 246 149 45.0 1e-35 MAAAESNVPATNQVVVESNDTEDDGITLMDLFRIVHKHLLVGIITFVVVFAAVCAYTFLA PPKYSATAQVFATYSDSSVQDNNISNINSASTYITNQIQSYPTLATTESVLKPVIDDLGL DTTVANLAGQLTVTNPTNTAFVNITAETGDAKQASDIANSVAESLSNVVEKSLYASGKES PVKLSVVQRAAEPISPSSPKVALYLAVGLVAGLILGVFATLIRDLMATRVEEASDLQDII NAPIMGRIPTDESLQSNKPIIVSNPAGRIAEEFRRIRTNLSFTSKVEGSDARMIVISSVG PSEGKTTVSVNVAAALAENGAKVLLIDADLRHPSVAERLSLEGGAGLTHVLSGQATVKDV VQRYWKPNLHILPAGPKPPNASMLLNSKTMTELLDAALQTYDYVIIDTSPMVVANDATVF GSKSDGIVLVSGRDVTMKRDLKDIAVQLDNLNVPVVGFVFNLEKERKSSTNGNYYYYYYY DEDGKKSKHAHKNSRKKSKHN >gi|222441571|gb|ABXX02000002.1| GENE 405 454077 - 454706 447 209 aa, chain - ## HITS:1 COG:Cgl0344 KEGG:ns NR:ns ## COG: Cgl0344 COG0394 # Protein_GI_number: 19551594 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Corynebacterium glutamicum # 35 206 7 192 201 93 30.0 2e-19 MFHEGAWVFPSPFIYSKTSIVKPIVFFFQEEIMKVLFICTGNICRSPMGELLLPQFMPDL ESDSAGTRGLVSHEIAPNSKRLLDQHGIDSSSFRAKRVTPQIAQGSDLILCFEHEQRKEI AVIAPTAARKTFLINDFANMCVYCKEQGYMGGNTRQEKLESVIDNASMIRPMIPDTNNVE DPIGKDFAVYQAAYNEICKALQTIASATA >gi|222441571|gb|ABXX02000002.1| GENE 406 454737 - 455243 818 168 aa, chain - ## HITS:1 COG:no KEGG:BAD_1356 NR:ns ## KEGG: BAD_1356 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 168 1 176 176 143 79.0 3e-33 MKKKIVAILATIAAVFGFGFAANTAMAYGATGTVSGNVATFTFTGLTPGQRYVVSYDDTT VENVTLAATKYSNVKEAHKDGTLTATYTFKSGFAGTIASSIYAVDGAGNPTGAALASASV TVAATGEGTAKKNETASTGAAIAPYVVAVVLLAAAGISLVAVRKSSAR >gi|222441571|gb|ABXX02000002.1| GENE 407 455494 - 455694 336 66 aa, chain - ## HITS:1 COG:AF1793 KEGG:ns NR:ns ## COG: AF1793 COG1476 # Protein_GI_number: 11499382 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Archaeoglobus fulgidus # 1 66 1 66 70 62 51.0 2e-10 MKTSLKFKRMERGLKQADLADLVNVRRETIGRLEQGQYCPSLRLAMDLAKALDTTVEDLF SFDDEE >gi|222441571|gb|ABXX02000002.1| GENE 408 455684 - 456100 591 138 aa, chain - ## HITS:1 COG:no KEGG:BBMN68_993 NR:ns ## KEGG: BBMN68_993 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 138 1 139 141 125 47.0 5e-28 MTFNRYILFRMVVEFVGAIACAIQMFQHHTWPGIITMGVFALVWAIGEIWLSTVYNRAHP RRDELSDEHQATAIRFTFFVLVVALVVLGFAGMIVTLFRHAPFTVPAMALPTLGMLALAI ADARYLWLEHEGGDTDED >gi|222441571|gb|ABXX02000002.1| GENE 409 456459 - 460850 5951 1463 aa, chain + ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 86 642 31 561 660 322 38.0 5e-87 MRISSRTFAGIAHVFTKQQPPQDGGPSEPMTRVERRQAARKARTIKTWKKAAAGVAAVAT MLGGMGVASTALASDRDSYQDTVGNATFEQAREQYGLTESMKNGAILHAWMWSFKTITEH MPEIAAAGYTSVQTEPMSKIKEVAANGKKFTENWYYVYQPANTSIGNFVVGSEDDLKEMT ATAHKYGVRVIVDVVANHFTSDWSAIDSDWQNKDYFHSRSNCGGNDGDQINYSSRRDVTQ CHLLGLWDLNTQNQYVADRMQDFLKTAVADGVDGFRFDAAKHVELPTEVFDNKTSNYWNT ILNNGSQFQYGEVLQGDSGLDYKAYADLFANNSSDGGGNTASNYGKSVRAAISSGNLSTK MVQNIDTGGAKEDQLVTWVESHDNYANGDKESTYLTNDQIVFGWAIVGSRKAGAPLYFNR PVGSGGTNAQFAEQSQLGDAGDDMWKNKSVVAVNHFRNAMDGKSEYLQNCGADQNNANKS CLMIERFTKDGTANDGVVIANMGGDQSLVGMSTNLDDGVYPDEVNGGSITVSGGKITSGT AKGNAVSAYYLKAEAKPYVSAEPSSATFSGSSVDVTLRASKAENLKYTTSEGKSGTFKNG DVITVGSSISVGESVTVTVTGTSTEDGSKLTGKTTVTKTEVAKQNLASRYGTNKVGFGVK KTISFNAGKGASISDWDSSMLIAQGAANDDPRVYRPNSMYEVPIDLYALYGAYDDDNLYL MWEMTNVQDVVDTGDDYPLSQGHLWQTQNLPFHIAIDTKDESTRVGKDGGLSTGGTLWAS GIKWSGEQNVNKVVTISTNGSNGPWIYKGDATGLDSNAEYGPAANAKTNTKASGVKFGYG NGILSSQVIGINGGWGESNGRVVGDMSADKEGSAQWVNFNDLGHNSAGMDDHYEIAIPLS ELGTTADHIEKYGLGVELAATFGLSAMDSLPYDMAMNDNADLPDTSSQVNNSYEKSDEDT FTVAMANIGGHEDPTPVTSVKINGGSYTTDLSNGAVAKKLTATTDPAGSSVSWSSSNTAV ATVSANGTVTPKKAGTTTITAKSGSQSDSITVTVTGTLPTPPVAKNTIYATKPSGWSKMY AYVYTGDGATAKNNAAWPGVEMVAADNCDQTGYQYEVPDSLASGAKVIFNDGGSQQYPGS RQPGIDYNGGTVTWDGSSASLKAVDCTVVVPPDDDKNVQITFKATGVDLKSGERAYVVGD WGQGKGKTWNRAGGVELTTVGGELTGTATVAKGQSMTMRLIKVSADGKTTWDPSTDRKTT ADKAKTLTLKWDERQVSQSVDVTINAAADLKSGESLYAVGDWGQDGKTWTRASGIRLTAT GADGVYSGTANVKTGKSMTFRLIKVDANGKTTWDPTTDRKTTADKAKTVGVAWDVNTVNE DGTVPVTFAITGDGVSNGKLTIQKGQLANLSVKGATGDPDMWWSDGAAVAVSGTGVVYGV ETGTAKVNVKAAGKTATITITVK >gi|222441571|gb|ABXX02000002.1| GENE 410 461139 - 461405 64 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSESAITVIPSIPDAHYCQSTPLYFTLPLVWRVQHTFSFYLNSSSRFHQTSDTPVLQTPF FKLFQDYFTNYHVLQEIADVCIHDVKTN >gi|222441571|gb|ABXX02000002.1| GENE 411 461389 - 462195 744 268 aa, chain + ## HITS:1 COG:no KEGG:Blon_2110 NR:ns ## KEGG: Blon_2110 # Name: not_defined # Def: glycosyltransferase # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 267 6 271 272 306 54.0 6e-82 MADSDITVAVATHKAYRMPIDGVYMPLQVGRALHPNVDLGMTCDNTGDNISQLNAQYSEL TGLYWMWKNCDADYQGLVHYRRHFAKNDSAKRHGDENERFSCIAGKQDYARLLDTCEIIV PERRNYYIETVYSHYEHTMQEGQLDATRSIIAQTNSDYLDAFDAQMNKTSAHLFNMFVMR KDLINEYCSWMFPIIGELAKHIDSSSYSVFEMRFPGRISEILFDVWLETNHYPYVEMPII SPEPVDWIKKGSGFLMAKFVGKKYVKSC >gi|222441571|gb|ABXX02000002.1| GENE 412 462207 - 463202 963 331 aa, chain + ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 7 217 3 217 344 151 39.0 2e-36 MAVSTQPLISVIVPVYNVERYLDQCVESLIGQTYERLEIILVDDGSTDSSCEQCNAWANR DNRIRAVRQCNAGLAAARNTGLDLAKGEYIGFVDSDDYVLPDMFGTLLHNLQESDADLSI ISYERENPDGSTYCNAFPDKKIVMTSQEAFAYVNQHGYFYVTAWDKLAKKELFDNLRYPL DAVYAEDSPVTYQLLDKADRIVYDSTPLYRYRMSENSQSHGITDKFAQSTGAMLDLVRTK YPHVEAYAAYGHLESIVGTCNRIMLAHQRKQWAQFERYARTELRELLPMVERKGIIGKSQ LLQWKLLATSPTLYGMMYALYKRRHPEIASH >gi|222441571|gb|ABXX02000002.1| GENE 413 463216 - 464592 1095 458 aa, chain + ## HITS:1 COG:no KEGG:LBA1727 NR:ns ## KEGG: LBA1727 # Name: not_defined # Def: polysaccharide polymerase # Organism: L.acidophilus # Pathway: not_defined # 5 438 3 421 431 91 23.0 6e-17 MTSTILFLTLLALLVLLIVAYRGDFAEPSILFVVGFTLAVFNGLTNYRTWDFDLSMQTCF VVGFGTFAFALTAYGVKVFFRSCVGHRTAHREYGEPQDIVLPMWVYVGGLLFTGLALLIV SRQIISLTLPYGGDGSLDKAIGLYDKLNKFSTKGVALSGIPSLLHLATNAMAYAWLFLAM RSVVVRSLHNDYLAVINVLAAVPMTLISGGRNSLIQLGVAAWTYWALFRRQNNRWKGMRL GFRTVLKFVAIALVGLASFKPLLSLMGRKAGDSTMYEYLSIYIGAPIKNLDAYLTNSMSP SLAVKSTQWGDMTLASTRASFPQIFGKTVLDWMQWQPFQRYGERSLGNVFTTYYAFIFDW GIAGAMLAIVLIAALSQLCYESAVFALQYGKAGIPISMMLYGAIGYCCAFSFFSNRWMST MFNQIMLRNIIIWVVLIFFVNSVRIRKRAFAKRVVLYV >gi|222441571|gb|ABXX02000002.1| GENE 414 464585 - 466189 1164 534 aa, chain + ## HITS:1 COG:SA0127 KEGG:ns NR:ns ## COG: SA0127 COG2244 # Protein_GI_number: 15925836 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Staphylococcus aureus N315 # 28 422 5 397 476 118 22.0 2e-26 MSERQPTKPVGQPSSKPAKHPTDVRIRSVKFNVLMNMIVTTSSVIFPLITVPYVSRVLST GGTGHVAFAQSVASYFSLVALLGVTYYGVRVCARVRDDRAELSRTVLELLVILACSTTMV FAVYLACLFTVPKMNAQFGLFALFGLAIWLSSFGVEWFYQALEQYEYITVRSVCFKLLAL VLMFAFVRQRGDYAIYGLIVVVAGYGSNVLNLLRLRRLVDFRNCGHLNISRHFKPMLWFT IASISSGMYIQVDIVMLGFLGTTDMVGLYQLVSKIKSVLVTAVNSVGNVMLPRLSYYQAR RKERQAGELIAKNMNFVMVFGSAIIALLILLADPIVALLGGADFAESAVPLRFVGIAVMC SAMNIVLANIMISKGMERTWAMVNAIGLALAVLANVLLIPQLGVVGSAISISLCEALMLA MRSYVCRGFLVGIRTSIDPIRILLSAIAAGCLTRGAIAICGAETWNAFLWLMFGGFLFTL IYGIALLLCRERFVMAMLQPVFNRLHVRKTNDENNAHGASNASDGRYANNGGWQ >gi|222441571|gb|ABXX02000002.1| GENE 415 466186 - 467250 932 354 aa, chain + ## HITS:1 COG:no KEGG:SOR_1646 NR:ns ## KEGG: SOR_1646 # Name: wefE # Def: glycosyltransferase_GTB_type [Streptococcus oralis] # Organism: S.oralis # Pathway: not_defined # 12 341 14 350 350 192 35.0 2e-47 MTNYVICERSLHHAHAGSKARDDIRQVLESQSWQPFEVRPGENKGYFDKLVCVGRTLAVW HRLERTVRCGDVVLVQFPLIMYNKVSLYALPSVRRMKARGALFVFLIHDLETLRGYSYTD FDKQWVTEADLLISHNPRMSEVLRKYGATVPIVEIGIFDYLLPQANPVPMEQRHGIDIAG NLSHGKAEYVYRLAERFPKADINLYGPKYDRRNGKTAWYRGIVAPDELPDKLEGRFGLIW DGDSLDTCGGYYGKYLTVNNPHKLSLYLAADKPVIIWNKAALAPFVVEQGVGVAVESLQE AMAVEYGMTQSEYARMVRRASQLGQKLREGWFTREVMAKVQAVLPSLRRENKER >gi|222441571|gb|ABXX02000002.1| GENE 416 467255 - 468301 904 348 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0374 NR:ns ## KEGG: BLLJ_0374 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 338 1 325 335 220 35.0 6e-56 MGVKQRIKTIVPHRVWRVLQGCKANMTLASYYAGQRKRFLRFCAGQWNVGQSEQLRGTMV YYIHRIEKGLSHRRFRAGFGRSAFGELRSVMDEWRERDYPVDDVTYIAARQVVRAYVRKH RALEKPIPEFVGVWFADEVASVDIESVEQAEKADVAGNAGVKTVRAADKRDNASLDYAAL FAGRSSVREYAETPVDMGTVRKAVSMSMKTPSVCNRQAYRVLLISNPKFIEQALALQGGW RGYDAPPVLALISVDVRSFVSVEERNEPYIDGGLFAMAFLTALECESLAACPLNTMMREK QEHEIRKLLGVPDYETLIAFVAIGNFPESIESPVSFRYDASVITRELN >gi|222441571|gb|ABXX02000002.1| GENE 417 468304 - 469404 502 366 aa, chain + ## HITS:1 COG:YPO0187 KEGG:ns NR:ns ## COG: YPO0187 COG0463 # Protein_GI_number: 16120528 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 5 120 6 118 329 62 36.0 2e-09 MSHTISVIIPVYRATLQTLHDCVNSLQRQQGSGFRIEAVIVFDGEPAFETAPISNWNSPL VSIRTETIAHAGVSAARNAGLRAATGQWAMFLDADDALAEHAVDGMLAFAVRYRCDVVMG AYRNVLAGADADANGVPDAAGAVIMGGKGEGSPSVEEHHYAETDMVFEGRRRLDLCEDML RPQRGIALVWGKLYSMPLIKGIDGFNETLSLGEDAEYAFRAVAAANRIGYVDEMVYEYRR NADSAVRSFSNDYVRRTISAIETMRDTIRQFREISDGTLDDYTLFHLTIIMINDLFNPEA PWNRHERKNHYGKVVNMPVFRQPLDRYRGGRFPVTRQIALLSMKYRWYYVSAAIAWVRHK QFSGKQ >gi|222441571|gb|ABXX02000002.1| GENE 418 469469 - 470626 848 385 aa, chain + ## HITS:1 COG:no KEGG:BF2806 NR:ns ## KEGG: BF2806 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis_NCTC9343 # Pathway: not_defined # 8 349 3 347 387 150 29.0 7e-35 MDEKHNIIGLITYHAAYNYGSVLQAYATQSTITDMGHDVTVIDYRPLEGERYYERLYWRG LGLKSSLADLTMLPVAGLRKKRMRNFERFISTNIHVGQRRYQEPEELNSLADAFDVAVSG SDQIINKHSNELERVDWKYMDPYLLKWANCRKISYASSPATMTDDELRRIGPALVEFSAL SARERSACGKLRQVSGKYVEHVCDPTLLLNAGEWEERIPLRKSQHVPEQYLLFYSLLRPK RAVGVFRQLRELSRRVGLPVAVLTPQAGNVPKCDELVNVLEAGPEEFLSLVKYAEGVVTD SYHGTLFSINFHKPFWVYTEGTKEHELGTRRGQILQEVQFADRIITDFSEVDCTDTSQTI DFCNADIALDIMRSRSKRYLHDALS >gi|222441571|gb|ABXX02000002.1| GENE 419 470755 - 473787 4054 1010 aa, chain - ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 61 708 34 658 660 379 38.0 1e-104 MKHRKPTPAWQKLGLRVSKKLAVGATALATVFGGLAVASVSAQASTDRNSYADTVGNPTF EAARKKYGLTKEMKNGAILHAWMWSFNTITEHMDEIAEAGYTSIQTEPMSKIKVNDANGK KFTENWYYVYQPTNTSIGNFVVGSEDDLKAMTVAAHAHGIRIIVDVVANHFTADWNAIDS DWQKSEYFHARNSCSGSGGDNIDYSNRWQVTHCHLLGLWDLNTANPEVANRMHDFLKTAV NDGVDGFRFDAGKHVELPNEFDGSQYWTTILQNGSQYQYGEVLQGDSGLDYKAYANLYAK YGEGGGGATASDYGKTIRSALWSKNLNAGNLMSLRNGGVNDDQLVTWVESHDNYANSDKE STYLTNDQIRFGWAVVGARAGGAPLFFNRPKASGGNQPQFAEASQLGDAGDDMWKDTAVA AVNHFRNAMDGEAEYLRNCGSEQNNNSCLMVERYKTDNNAGNDGVSIANMGGDQNLAGTP TKLDDGTYTDQVNGGTITVSNGKITSGTAKGDAVSVYFNTSVKESVSATVSKKFSSNTIK VTLNASNATNLTYSLSNGKNGSFVDGDSLTIGGDMEIGDSVTLTVKGTGAESGEALEFTA TYTKVEVQANTIYATKPSGWSKMYAYVYTGDGATAKNNAAWPGVEMTAMAAADSCAKAGT YKYEVPDLGEGTYRVIFSNGNGSQMPGASQPGFEFSGKVSWDGSSASLTAITCTATPPVI KTADITFSATADLKTGETLYAVGDWGQGKGKTWTRAGGVKLAKNGNAYTGTTTMTKGQAI TARLIKVDANGKTTWDEIGDVKATADKTKTVDLKWTNAVENTVDITINAAADLKTGETLY AVGDWGQGKGKTWTRAGGVKLARYGNAYTGTTKVGKGNAITFRLIKVDANGKTTWDSAKD RKSKADKTKALGVSWTSGKVNEDGTIPDDSAISISGKGVADGKLSIQKGNLAELYVIGTQ DATPSDAVWWSDGAAVAVSGTGTVYGVQTGTAKVNVKVGNQTATITITIK >gi|222441571|gb|ABXX02000002.1| GENE 420 474431 - 474931 527 166 aa, chain + ## HITS:1 COG:no KEGG:BAD_1353 NR:ns ## KEGG: BAD_1353 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 142 1 142 151 179 65.0 4e-44 MSVLDGFKEVGERTGGKLTMTVMLESVRFSKGVSEVLGRPEYVKLLVNYERGKFAIQVCD ENDDFALQFNAPNADTPSSVTTRNLDLLVATQKFFTFPEVPADKIAFFALDGEYHSDERV IIFDAKNGVRSGTVGKRGPKAGHGGRRRRKIDDVKEATVIGSNNAL >gi|222441571|gb|ABXX02000002.1| GENE 421 475053 - 476051 1265 332 aa, chain - ## HITS:1 COG:BS_yabE_1 KEGG:ns NR:ns ## COG: BS_yabE_1 COG3583 # Protein_GI_number: 16077108 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 83 226 184 327 341 64 33.0 3e-10 MANHSKHARSSTFAMPSKSSLVKIAATVAAVGLLATGGIVSRNLYTSAEQNTANQVTAFS VTDSAEASRGNARELLNGDTSYVTVKINGKSRVVPGTNFTDVKSVLDAGDITLEPEDTVS PSLTTKVDEKTVITIQRAGASVEVSDTAIGFNVVKKETSSLPEGQEKVETEGEEGVMETT NLVTKSGDTVVSSNMISSYVKKAPVDKVILVGTGSTSSSSSSASASIGTTVPAGEMQQWA HDYLLSNGYTEADFTATVYIITHESGWSVTATNPSSGAYGLPQALPGSKMVSAGADWATN YQTQLKWFWGYCAQRYGSIQGAYTYWLANHCY >gi|222441571|gb|ABXX02000002.1| GENE 422 476299 - 476664 478 121 aa, chain - ## HITS:1 COG:MT1517 KEGG:ns NR:ns ## COG: MT1517 COG0526 # Protein_GI_number: 15840931 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Mycobacterium tuberculosis CDC1551 # 1 121 1 121 123 106 45.0 9e-24 MATHAVTSQDFNQVVESNDLVFVDFWATWCGPCRAFGPTFEKASEANPDIYFAKVDIDQN PDLASAAKVQAVPTLMVIKNQQIVFQQAGALRASDLDDLIAQAKELDVNAAAAEEATEQA Q >gi|222441571|gb|ABXX02000002.1| GENE 423 476864 - 477475 767 203 aa, chain + ## HITS:1 COG:no KEGG:BDP_1813 NR:ns ## KEGG: BDP_1813 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 203 2 204 204 367 88.0 1e-100 MNDEVPDEGDFDAGRRRGEFDDITPEDFIRGIGNPPGWLASGEINRMRGEMPIPYVLVVP VRTDDLGRVSQVGSLLRVSDDGSIERTLIAGRVLYHESLREAVARNVAKDLGDIALPQLP VSLQPFTVAEFFPTPGLSDYFDSRQHAIALCYVVPIAGDCKPQDETLDVEWVNTNSEILD TFINQMSNGYGTIVRQAIAWAGR >gi|222441571|gb|ABXX02000002.1| GENE 424 477448 - 477573 71 41 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351731|ref|ZP_03742754.1| ## NR: gi|225351731|ref|ZP_03742754.1| hypothetical protein BIFPSEUDO_03328 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03328 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 41 1 41 41 72 100.0 1e-11 MYLSLALPAFASCHALSWRPRPTGFDVNHKPVGYLPAQAIA >gi|222441571|gb|ABXX02000002.1| GENE 425 477607 - 478455 768 282 aa, chain + ## HITS:1 COG:aq_327 KEGG:ns NR:ns ## COG: aq_327 COG0596 # Protein_GI_number: 15605847 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Aquifex aeolicus # 18 279 10 250 256 83 25.0 5e-16 MTIELHNNVYCEGEGLPVVLVHGFPVDHRMWDECAEALEAAAVEHGVKRFPIWGPDMPGA GEGPIPSDEISGGKDADGAFPNGLDHMADAYVAMLHAAGYDKAIWAGLSMGGYLVLDIQR LHPEAVAALALCDTKAAADSAQMRAKRIAIAEACESTGTHEPVMGFAASTPEDSTIKQSA AYREQFTTWINEQPAEGIAWRERMAAGRPDLNDVLPAITAPVAVICGDKDPSSPPSVMTP IADAMTGTSADMTVIFDCGHFSAYEHPQAVADALLALVRRVQ >gi|222441571|gb|ABXX02000002.1| GENE 426 478588 - 479676 934 362 aa, chain + ## HITS:1 COG:CAC3396 KEGG:ns NR:ns ## COG: CAC3396 COG2816 # Protein_GI_number: 15896637 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Clostridium acetobutylicum # 155 357 78 267 271 135 36.0 1e-31 MSVFSPLALTQALPFLPLAQGDIDYEVSRRGEPDLFDTALLEPATKVVLVKDGMVAVPRG QGAIADYANVHMRLAQLPGAYVAAELHTHPTALAIFLGSYGGKRDEHVVAVDVSRVKAAE TVAASSEHMGADDAFGEQHEPEAKTSKSLLESAAERFDWVDLRGFAPHASAREAGQATTA ISLGVWHARQRHCPTCGAPTEPALGGWAQRCTSEADGKRLLFPRVEPAVITAIVDHEDRL LLQHNSAWRNTGLYSVSAGFVEAGENLEHACRREAKEEVGIDIGELKYLGSQPWPFPASL MMAFKGVANTTDVRVDGDETLQARWVTRDEYMNELVAGRMEAPGKATIARYMIEEWLGHD LP >gi|222441571|gb|ABXX02000002.1| GENE 427 479732 - 480136 672 134 aa, chain + ## HITS:1 COG:aq_1108 KEGG:ns NR:ns ## COG: aq_1108 COG0509 # Protein_GI_number: 15606376 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Aquifex aeolicus # 19 129 17 129 171 92 46.0 2e-19 MSEENDNKPNLDVPEHLEYSDEHVWVDASTEPAMVGITEYAADQLGELVYIDLPEVGTEV QAGDEVAELESSKAVTPLVTPVAGVIRYVNNEAADDPSIVTGDPYGEGWIFKIELEDDEP GLLSSEEYANIVAQ >gi|222441571|gb|ABXX02000002.1| GENE 428 480246 - 481481 1369 411 aa, chain + ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 77 399 27 336 344 192 33.0 7e-49 MTEPQPLPQREPDSISEDDMPTVPIPARKVVTTFDAASKHERIEVKPPLTRLFRRTITRA FNKWVTFSTSMVLNLNWYPRVEPYVGYGTEHYSRLICRTVYGPFKRQAGRLTRGIRAMLT IPSPHTKVRIAIDGVPLETVQVGASEVHDEVDAQRNVSSEFAASDSAGYLDLVAEHSLEP GVHDVSYKVRSRKPVTANLFTIPSGTKVGVISDVDDTIMVTQAPSLMKAAYNLLLLDPKK KMPVAGMNLLFNRIADMFPDAPFFYLSTSPWNVESSIRHFIANHGFPEGPLLLRDLDPRP KTFIPSGVQHKLEYAEQLMADFPDMKFILIGDDGQRDPTTYATIARRYPGRVLAIGIRQL SPREVAGNLGTVAGRAVTQPIPVTDVPVFTGTTGSNLMKTMLPFLKQQMGV >gi|222441571|gb|ABXX02000002.1| GENE 429 481555 - 484080 2151 841 aa, chain + ## HITS:1 COG:Rv0782 KEGG:ns NR:ns ## COG: Rv0782 COG1770 # Protein_GI_number: 15607922 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Mycobacterium tuberculosis H37Rv # 515 835 216 531 552 349 53.0 1e-95 MTDFRGEQGATGARESDESVQDKCGMPIAKRVPKERVFHGDTFIDEYEWLRDKESHDVQD YVAAQNRYCEQRMEPLKTLRSTLFDELKSHVQENDMSVPTRMDGYWYFVRTQEGQQYAVQ CRVPIRGADDWDPPTIEIGVPIDGEQVVFDTNAEAQGHDFFRIGGMDISKDGRWMLYGTD TSGDERYDFRIRSLETGKELPEVFKGIGGACFTPDAQWVFYVKLDDAWRPYAVMRHRVGT PIVDDVEVYREQDERFWVGIGLSFDERNLVIGTGSKTTTEVLLLSTDDPEGEFRAFIPRE QDVEYDVSFSRFEGAGERGEDIPLAVVYHNALNPNFEIDVIDMRSHEPPYRLGEGVRVAV GSPYGCEHGDEVEPGASEMPIGTPYSNPCNPAILQGAHGLGIEGISIHRHYVALQYRAES LTHIAVMTKDAAAEDFLAGRPWKFTELVPHALEDDWDVDESVDEINEERAEVWGALDQLA AAQGEGSAVHGVSRKAMTSSDGATADAMPGETRRLYSIGVGGNPSYDAPRMRYSFSSYTR PGELHDIDPATGEDRLLRRATVLGGFEPREYMERRVWVTARDGERIPVSLVWRRDVPACD SAMFVTGYGAYEISSDPGFSVSRISMLDRGVLYAVPHIRGGGEMGRAWYEQGHLLNKKHS FEDFVDAVRALQCAGLASPARTVADGGSAGGLLMGAVANMAPECFAGVEADVPFVDALTS ILDPSLPLTVTEWDEWGDPLHNADVYRYMKEYTPYENAPSDANDARVAVFPKIFITTSMN DTRVLYVEPMKWLARLQRAGVDAVAKIEVEAGHGGTSGRYKQWEEISYENAWCLGVMGIT S >gi|222441571|gb|ABXX02000002.1| GENE 430 484213 - 485253 1521 346 aa, chain + ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 10 343 3 335 340 400 63.0 1e-111 MSDSAKKYTIAVIPGDGIGKEVTPWAQKALEKAAEGVAEFDYENFDLGAERYLRDGAILP EEEEERIKKTDAILLGAVGDPRIKAGILERGLLLKLRFDLDQYVNLRPSKLYKGVTSPLA NPGDIDFVVVREGTEGLYCGAGGAVRRGTPNEVATEVSINTAYGVERVVRYAFQLAMKRR KHVTLVHKKNVLVNAGDMWQRIVDKVAEEYPEVSHDYLHIDATTIFMVSNPSRFDVILTD NLFGDIITDEAGAVVGGVGYSASGCINASNEYPSMFEPIHGSAPDIAGQNKANPTAAILS AAMLLRHLGFDDAAAKIDAAVEADIEELGSATRSTDEVGRDILARM >gi|222441571|gb|ABXX02000002.1| GENE 431 485426 - 486169 890 247 aa, chain + ## HITS:1 COG:PA0825 KEGG:ns NR:ns ## COG: PA0825 COG2314 # Protein_GI_number: 15596022 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 166 241 16 93 111 66 48.0 5e-11 MSDNNADYNGSGQDEYFATNDSTQADYRQSQDGYNQPASQPHNPDPYASQQPVQGYAPGT QGNNIPGGTYGNGQPYGQSAAYGSSVPAYGSAAPAYGQPTQPAQPAQPIYGQPTYGPTDY AQSAQTPYYQEPTQPQYTQSAYNQPPTYAQQTYYQATQQQPGYGYAQKSKIVAGLLGLFL GTLGVHNFYLGYTGKAVAQLLLTLIGWIILIGPIISGIWALIEAVLILCSSYGSNWHRDG RGQELQD >gi|222441571|gb|ABXX02000002.1| GENE 432 486169 - 487311 804 380 aa, chain + ## HITS:1 COG:Cgl1050 KEGG:ns NR:ns ## COG: Cgl1050 COG0095 # Protein_GI_number: 19552300 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Corynebacterium glutamicum # 7 371 8 311 352 221 39.0 2e-57 MGRGLYKQPGGKLVGVSVRLSDDIPAYFRECASSIQSVEQCRIDGDFFLDGDDKDSRRLL QDWENLLQSQRGAPTRDITRRLQAITANYPNVRLVGMTAEGIAIAFLRAITGSESRNAED ATGNGNIARSTKQYSGEQPGMHNALTQEEYLERWRDLKPTVIHDKPRDPNEQMETDIAWA REVAAGKREPTLRIWEWAAPAVVIGKFQSLEDEVNTAVAQKEGFTVVRRCTGGGAMFIEP GNTITYSLYAPFDFTQGISIEESYRLCDFWLVRALKELGLDVRFAGLNDIATQYGKLGGA AQRRFTPVEGGPGAILHHVTLAYDIDAEKMGRVLNTSREKMSDKAVKSAVKRVDPMRSQT GMSREDVVERLLDAARRVTM >gi|222441571|gb|ABXX02000002.1| GENE 433 487483 - 488208 598 241 aa, chain + ## HITS:1 COG:ML2302 KEGG:ns NR:ns ## COG: ML2302 COG0664 # Protein_GI_number: 15828234 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Mycobacterium leprae # 18 240 5 224 224 177 45.0 1e-44 MATPNETNSGPSGESATLLHTALFKQVSSEEAEELLPHLQHAEYSKGDYIFREGDTDHRM YLLERGRVKLIRQSSDRRVQLLSIHAYGEVLGEIPVFDPHGGPRTASAVAMTSDTKVVWL EHDALFAWLDEHPRVAVDMLQVLAHRMRDNNERISELVFMDVPGRLAKTLLNLASRFGEP VEAGLKVPHDLTQEEMAQLVGSSRETVNKALMDFANRGWIAREGRSIIIYQPGMLIRRSR R >gi|222441571|gb|ABXX02000002.1| GENE 434 488310 - 490613 2244 767 aa, chain + ## HITS:1 COG:ML2308 KEGG:ns NR:ns ## COG: ML2308 COG0744 # Protein_GI_number: 15828240 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Mycobacterium leprae # 29 606 21 589 803 202 31.0 3e-51 MGTMPEKKTLTVQRVLALVIAYITLSVGGGVAASLFLLPAVFGANSVAKAVIPSLSVEGI DFDVTSLPQKSTMYASDGTTKITEFWDQNREVVPLKKISKYMQQAVVAREDRRFFTHGGV DVQGVFRAFVQTYMKGDHQGGSSLTQQYVKNVLILQAQQDDDPIAQYHASEDTIARKMRE MLISVQMEKQYSKPEILQGYLNIAQFGGNSLYGVQAAAKRYFNTTADQLNIVQSATIAAI TKNPNAYDPSVESNQPESEKQRNIVLQLMNEQGYISDAEYQEAVNTPLADTLDVQPISTG CMAADYDAGYFCDYVVHKILNSKEFGKTSEDRERLLKEGGLKIVTTLDIDANTLLNETAR NTIPPEDSSGMEIVMASVKPGTGEVLGFGLNRTYDATEAAQNDQTRDSMNYAVDREDGGG MGFSIGSSWKPVNLVAWMEAGHSVNENLQTSTRYSTSLFACDRYTGGTDTWNVTNAITNG TVNPETPALALARSHNTTQASMGSIIGLCKIADTATELGYHDANTGETLDKTSSFVPAMM VGNVNVSPLTMASIFAVYASNGVQCDPIALKQVTDVDGNDIKVPSANCHQAVDPEIIQTL AWAMNQGVVRPDGAGGVAQLANGRKTFAKTGTHEDQLVTTGGFIPNQIATFVLVGDVQNP VGHPIANIAINGQYHSYWDGSTIAAPAWRDFMNAYAERKQLPIDNDYGQPAAKYSATSST VTKIGGGKQNATQQQSTIIQQQNQSLQQQSQQNDQQDDQDQQQTEDE >gi|222441571|gb|ABXX02000002.1| GENE 435 490807 - 491943 1220 378 aa, chain + ## HITS:1 COG:Cgl2982 KEGG:ns NR:ns ## COG: Cgl2982 COG1902 # Protein_GI_number: 19554232 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Corynebacterium glutamicum # 37 378 1 343 343 328 52.0 1e-89 MSEDEKKAKRSKKATTNGTVGLFDPMTLRGMTVRNRIWLPPMDTYSALAQDGLPTPFHYQ HYVSRAMGGFGMVIVEATAVTPEGRISPCDLGLWADEQMDAWRWIVADAKAAGATMAVQL NHAGRKASTGCFSIGYEHESVPEEQGGWQTVGPSANAFGPLDKPRELTVDEIHAIVDQFR DAAWRAYDIGFDAVEIHAAHGYLLSQFLDPLINEREDEYGGSFDNRIRILVEVVDAVRSV IPDTMPVLVRVSATDWAAGGWDLDQTVNLAKVLKKHGVDLMDVSTGGMIPGVTIPVKPDY QVPFAEQVRSRAEIPTTAVGLITKPKQAKKILKSGAADAIEIGRAALRDPNWPLRAAHKL GIPTEDAPYQPQYVRGAY >gi|222441571|gb|ABXX02000002.1| GENE 436 492068 - 493216 1299 382 aa, chain - ## HITS:1 COG:slr1418 KEGG:ns NR:ns ## COG: slr1418 COG0167 # Protein_GI_number: 16332087 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Synechocystis # 34 381 15 374 381 189 31.0 7e-48 MTYVSENFWHDAVNKATTDLFTFGYKHIIKPHFVFNQTPDVAHDQMIQFCKITKNIPPLM WACREMLNYSDPVLETSVMGVDFVNPFGLSAGLDKNCEMPVLLDNAGFGFETVGSTTSRP CPGNPKPWFHRLPEYDSMMVHVGLANEGSEIVVPRAEQAWTKARDMQISVSIARTNDDKT GDLDEGIEDYCISMRRTAGRTAMVEVNISCPNTMAGEPFNQSPEALDKLFTELDKIERPQ PTLVKMPLNKSWEEFKDLLDVLAEHNVQGLSIANLQKDRAGMEIPRDWEGGLSGSPCYEA SNERIKQVYREYGDRFAIAGIGGVFTPQQAYAKIRSGSSLVMFISSLMYRGPQQITVLKR GLAELLKRDGFDHVSQAVGIDA >gi|222441571|gb|ABXX02000002.1| GENE 437 493389 - 494117 644 242 aa, chain + ## HITS:1 COG:CAC0231 KEGG:ns NR:ns ## COG: CAC0231 COG1349 # Protein_GI_number: 15893523 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 7 223 1 214 254 108 31.0 9e-24 MCDNVRMISSQRQHLILSRLRTRGAVRITALSKELGVSAMTIRRDIADLADKGLLKRVHG GAVTTSTLLSEPLFSVKSQMDIGLKDAIAQEAIKYVAPGDVIAIGGGTTAYVFAQHLLES QQSSGITILTNSIPVAELVQALESKDVEVIVTGGVTTRSNSLVGPIADKVVASLRVNTVF LGTHSVSIPRGFLMPNSLEAATDMAMMDIADRTIIFDRSHQVELHIIVAFRTLRPGGHGH YR >gi|222441571|gb|ABXX02000002.1| GENE 438 494068 - 494211 97 47 aa, chain + ## HITS:1 COG:no KEGG:BAD_1333 NR:ns ## KEGG: BAD_1333 # Name: not_defined # Def: DeoR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 47 227 273 273 84 89.0 2e-15 MSLFARFDQVDTVITDDGLDPDSVGKTRDLVKELVLAHQSEPIQEGE >gi|222441571|gb|ABXX02000002.1| GENE 439 494217 - 495467 1767 416 aa, chain + ## HITS:1 COG:TM1191 KEGG:ns NR:ns ## COG: TM1191 COG1085 # Protein_GI_number: 15643947 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Thermotoga maritima # 75 408 3 313 318 161 29.0 2e-39 MSEFANYTPGEYAKEHIRITPTTLADGRAFFYLDDDPEYVSGAKTRELNDPRQLAYRFSN QLNAAGEEVPYAAPEMRRDPLTGDWIPMATARMNRPITAGPGATAKGNPLAARKPGDPYQ DGEVPDTDYNVVVFENRFPSMVRVPGRSEAVEYVNGNPLWEKKLAAGRCEVICFDPDEDG LPADLPVSRLRTVVEAWAFRTAEISKMEGLEQIFPFENHGQEIGVSLAHPHGQVYCYPFI APKMEAELKQTEAYHEKTGGNLLKDLMNSEIEAGERVVMRNHSWVAYVPAAARWPLEVHV APVRDVLTLDELNDQERWDLAVMYSTLLKRGNAFFDKGDGKGMDLPYIAAWHQAPIHDAR RENYRLNLQFFSFRRAANKIKYLAGSESGMAAWVSDTTPELIAKRFHELGPIDIEG >gi|222441571|gb|ABXX02000002.1| GENE 440 495499 - 496749 1630 416 aa, chain + ## HITS:1 COG:BS_galK KEGG:ns NR:ns ## COG: BS_galK COG0153 # Protein_GI_number: 16080871 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Bacillus subtilis # 22 400 8 373 390 188 34.0 2e-47 MTAVEFIEPLSHDEGVKNATDLFRATYGEEPAGVWAAPGRVNLIGEHTDYNAGLCLPIAL PHRTFIALKPREDTKVRVVSDVDSENVTEADLDGLQAGGVEGWAAYPVGVAWALREAGFD AVQGFDAAFSSCVPLGSGLSSSAAMTCSTALALDDVYGLGYGASDAGRVTLINAAIKSEN DMAGASTGGLDQNASMRCTFGHALRLDCRPELSPLENVSQQEFDLDKYGLELLVLDTQAP HQLNDGQYAQRRATCEKAAEILGVANLRVVADSIAKSDDPFQALKETLDKLEDDTMKKRV RHVITEIARVNSFVRAFANGKIDEAGRLFNASHDSLAADYEVTVPELDIAVDVARANGAY GARMTGGGFGGSIIALVDKGQGHEIAQKIADRFEKEGFNAPRALPAFAAASASREA >gi|222441571|gb|ABXX02000002.1| GENE 441 496911 - 497138 346 75 aa, chain + ## HITS:1 COG:no KEGG:BDP_1788 NR:ns ## KEGG: BDP_1788 # Name: not_defined # Def: multidrug resistance protein # Organism: B.dentium # Pathway: not_defined # 7 71 416 480 484 109 90.0 4e-23 MRCRSCGSTILNTMQQVFGAIGTSIATCLLSMGSGATDAEGFVAGSRYGYVFGLVLIVIV LVFSFFLKEDKISEK >gi|222441571|gb|ABXX02000002.1| GENE 442 497421 - 497693 479 90 aa, chain + ## HITS:1 COG:lin0537 KEGG:ns NR:ns ## COG: lin0537 COG3830 # Protein_GI_number: 16799612 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Listeria innocua # 3 90 2 89 89 85 51.0 2e-17 MNKAIITVVGQDTVGIIARVCTYLSEHQVNVLDISQTIIDGFFNMMMIVDYSNTDKEFGE VVDDLDKLGEEIGVRIRCQREEIFTKMHRV >gi|222441571|gb|ABXX02000002.1| GENE 443 497733 - 499097 1906 454 aa, chain + ## HITS:1 COG:CAC0479 KEGG:ns NR:ns ## COG: CAC0479 COG2848 # Protein_GI_number: 15893770 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 454 1 451 451 564 65.0 1e-160 MLNIMEVHETNKMIEQEKLDVRTITMGISLLDCAADSVDEVCDNIYNKITTYAKDLVSTG KAIERDYGIPIVNKRITVTPISLVGASSCKTSDDFVKIAHALDKAAKKVGVDLIGGYSAL VSKSMTPAEELLIRSLPKALSETDIVCSSVNVGSTKTGIDMNSVELLGHIIKDIAHATAD NDSYGCVKFVAFCNAPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDEAKGKDFEF LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAATNGCLKIEKLEAM TCVCSVGLDMIAIPGDTTASTISGIIADEAAIGMVNQKTTAVRVIPVEGKGVGEMANFGG LMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN >gi|222441571|gb|ABXX02000002.1| GENE 444 499461 - 500156 925 231 aa, chain - ## HITS:1 COG:MT3475 KEGG:ns NR:ns ## COG: MT3475 COG0219 # Protein_GI_number: 15842962 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Mycobacterium tuberculosis CDC1551 # 79 230 4 153 154 171 53.0 1e-42 MSFIVPILAFMTNEEHTNDAQGATAEEAKVEKMFEYGYRKSNYGPDELVTDAHGNPISVV DAMLSAEDAAKAETSTPHLCYYSPRIPGNTGSAIRLCAVTGTILHLVEPLGFNLRDTKLR RAGLDYHDMAHVVLHPNFENLVESMPNSRIIAFTAHATKLYTDIEYKPTDILLFGPEPGN IPDPMDIMAGPHVAEQVRLPMRPSLRSLNLTNCASIAIYEAWRQLGFAGGQ >gi|222441571|gb|ABXX02000002.1| GENE 445 500146 - 501090 800 314 aa, chain + ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 16 303 5 282 293 234 44.0 1e-61 MNDTNEPNTEIENAEAVADALAEWWHASARDLPWRFGRTTTWGVLVSEVMSQQTQMSRVV PYWNDWMERWPDAVALADAAKADVITAWGRLGYPRRALRLQECARVVASDYDNKLPRTYD ELLALPGIGDYTASAVMSFAFGERIAVVDTNIRRVLSRVFLGEESLGGAARPAERALAKQ MLPQDDASKCRRFDRPSVVWNQSVMELGATVCTAKAPLCEACPVSGHCVFLHNGRPGLGE RRTRPRQRFQGTDRQVRGLVLNALRNLPEGATALNRKSLERLWDDHIQLDRCIASLDEDG LIEILPNADVRLPV >gi|222441571|gb|ABXX02000002.1| GENE 446 501142 - 501789 576 215 aa, chain + ## HITS:1 COG:no KEGG:BAD_1320 NR:ns ## KEGG: BAD_1320 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 215 1 214 214 328 75.0 1e-88 MAQKTSSKSGKKRSKKQQAIFRRRRIVVGIAAIVLISFLVFCLYSLSRGIVAVNREIHHA DVYAISRKEVPSPTKEKKSGVPDCDASNVALSLTPAASSFGVGDSMDFTTDVKYDGSSKV GCLVDVSASSVVLTIKSGDDVVWKSNVCPVDTDYRLLAKGDEVRQTITWPGTRTGSECVE DQSTLPKVDRGVYSAQLSIEGHPKAKSDPVGVTIE >gi|222441571|gb|ABXX02000002.1| GENE 447 501884 - 505513 849 1209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 704 1165 902 1390 1392 331 42 3e-89 MVANGSASGETYRNDLASDKERPLAEATTNTTTIIARADQHDIDLHKASDRVNFGSIREP IDVPYLLGVQTDSFDWLIGNERWQKRVEEDLANGTNTVPHTSGLDEVFQEISPIENFAQT MSLTFSDPYFEEPRHTVQECKEKDYTYSAPLYVNAEFENGDTGEIKSQTVFMGDFPLQTP HGTFIIGGTERVIVSQLVRSPGVYFDRSQDRTSDKEVFGAKIIPSRGAWLEFEIDKRDVL GVRVDRKRKQSAIVFLMAIGMTKDEIADAFRDYPLVMDALAKETVQTQDEALTDLYRKIR PADTPTPEAGRNLLDSFYFNTKRYDLARVGRYKINRKLGLEKDVNDRSLSREDIISTIKY LVTLHAGDTKFPGKRDGQDVDLRVDVDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVR ERMTTQDPEAITPQSLINIRPVNATIKEFFGTSQLSQFMDQNNPLAGVTNKRRLSALGPG GLSRDRASMEVRDVHPSHFGRMCPIESPEGPNIGLIGSLATFGRINPFGFIETPYRKVIN GHVTDEVEYMTADRDAEHVIAQANQELDENGNFVKKQALARVGEEEAVDVPVSSVDYMDV SPRQMVSVGASLIPFLEHDEGHRALMGTNMQRQAVPLIESERPLVGTGAEWRAAVDSGDV ILAEKPGVVTYVSADIIRVMNDDGTTSSYKLAKFLRSNQTTCYNQVPLIHDGERVEAGTV LADGPATQKGEMALGKNLLIAFMPWNGYNYEDAVIISQRLVQDDTLSSIHIEEYEIDARE TKLGAEEITRDLPNVGEDAVANLDERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLL RAIFGEKSREVRDTSLRVPHGETGTVIAVKEITREDAEEDGDELPNGVNQMIRVYIAQHR KITQGDKLSGRHGNKGVISRILPEEDMPFLADGTPVDIMLNPLGVPSRMNLGQVLELHLG WIAHAGWDISLDPDTEAAWKKYIPQGAEKGEPGTPVATPVFDGVRPETIKGLLSCTLPDR DGNKLVGDDGKAVLFDGRTGEPYPKPISVGYMYMLKLHHLVDDKIHARSTGPYSMITQQP LGGKAQFGGQRFGEMEVWALEAYGAAYTLHEMMTTKSDDVDGRVRVYGAIVKGDNLPPAG IPESFKVLLKEMQSLSLNVEVLNAEGVAIDMKDEDDDPSTSSDDLGFNIGARPDAAAKED QVVEEPEFQ >gi|222441571|gb|ABXX02000002.1| GENE 448 505605 - 509618 5157 1337 aa, chain + ## HITS:1 COG:Rv0668 KEGG:ns NR:ns ## COG: Rv0668 COG0086 # Protein_GI_number: 15607808 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Mycobacterium tuberculosis H37Rv # 1 1313 1 1316 1316 1585 61.0 0 MLDVNAFDKLRIGLATADDIRNWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC ACGKYKRVRFKGIVCERCGVEVTKSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDI APKDLEKVIYFAAYMVTSVDEEQRHEDLPGLQDEFDNDIANLEKRRNAEIEERAKKVEAD LAELEAEGEAKGSARAKLRNSAEREMAAIRVRFDEQIQRLSAVFDRFKNLKPGDMEGDVD LWREMEDRYGDYFEGCMGAEAIKKRLQDFDLEAASKQLREEIDTGTGQRKARALKRLKVV NAFLTTGNKPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE LGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG KRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKRLVDRG DSEVWGVLEEVIAEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD QMAVHLPLSAEAQAEARSLMMASDNILKPADGHTVTMPSQDMILGLYYLTTVIDGAKGQG RVFSSLEEAEMALDKHEIDMQAKVLIRLPEDFVLPKGWEPSEIEVVDPEPGSPAVVKEER FHDGSVLFATSYGRILFNSTLPVDYPFVNDQAPKKRLSKIVDDIATRYSTAQVAATLDAL KDMGFTRAPWSGVSFAFSDVIQPSERDEYIEKYEAEADKVNENYEIGMLTEEERRQELID LWTKCTSEVSEAVEEHFDSKNNLAIIVQSGARGNMMQINQIAGMRGLVANPKGEIIPRPV KSNYRDGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKRG LTMKVGERDAEGNLHLVKAADGGPYSRLLATDVIDPADGETVLYKAGDALSMDVLNDLVA HDVEEVKARSVLTCESKRGVCAKCYGWSLATNKLVDVGEAVGIVAAQSIGEPGTQLTLRS FHSGGVASASDITQGLPRVTELFEARTPKGEAPIAEFAGVVKVEDTERGRQVILKPDDDS VEPIAYPVTRRAPMMVKDGDHVEAGTQLIEGSVDPKKILRILGPRAAQVNIVEEVHTVYR SQGVDIHDKHIEVIVHQMLRRITVIDSGDTDLLPGELVDQARFKAANMKAVKEGGKPAAG RPELMGITKASLATDSWLSAASFQETTRVLTEAALSQKVDDLKGLKENVIIGKLIPAGTG LARYRNAVVEPDKAIRDTIYPNFGLGGDESDAAFGDADLSEVDFSNIDFGDLKLGDDFNP DDFLDDNGGQMDLGDTL >gi|222441571|gb|ABXX02000002.1| GENE 449 509822 - 510499 665 225 aa, chain + ## HITS:1 COG:no KEGG:BAD_1317 NR:ns ## KEGG: BAD_1317 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 4 225 22 222 222 236 65.0 7e-61 MANYNEGMSFLPYPPPPEPGWYDDDATVMSSLVEPAMAEAAQSQPTSQPTYESPESQAFQ ALENVQESAESYAANIQPVEQAAAALEPSDVEPVNDDDDIDWDGTVLSSAFTMKQPKLEY VLYNEQTGQEVIVDMGVLLGRKPSAEVPEGAKFVKLEDPTRTISRNHAAISFDQDGVLWI EDYGSLNGTYIIQGNEEIKVERKPMKLDAPCTVRIGDQFFTFEQR >gi|222441571|gb|ABXX02000002.1| GENE 450 510667 - 511383 607 238 aa, chain - ## HITS:1 COG:no KEGG:BAD_1316 NR:ns ## KEGG: BAD_1316 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 238 2 245 246 209 62.0 6e-53 MVDFDAAVAAVQDPNADPVFLAKIAYENPEFGANVVANPRAYPGLKRWVAQFGDERARQQ LVAMGWPVPQDGIMQQEAETASEQAQYQMPSEQAQYQMPSEQVQYQQPQQSSEVQYQAQH QPPATQQCQPEPFAATPASNMANDASTEYVDPYTNPADLSEVADFSPIQPQEPVASNAGF TAELAMTTEDQMLMAEIASKAPELHPFLARNPHIYPDLLNWLASLNDSAINAAIRLRR >gi|222441571|gb|ABXX02000002.1| GENE 451 511485 - 512360 801 291 aa, chain - ## HITS:1 COG:mlr2361 KEGG:ns NR:ns ## COG: mlr2361 COG0631 # Protein_GI_number: 13472160 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mesorhizobium loti # 6 254 29 262 280 92 29.0 7e-19 MIFRSIEAGLNSNVGCKRKNNQDNALASRGVYVVCDGMGGGKGGERASAQVAACFSQLAE QPSRNRTSIEHALSQSQQQVLELGQELGGIAGTTITGVVLPTRVEDSVHEQAIDEYCYVI NVGDSRTYHMRADAEGHWMAESLTRITRDHSERQNAIDTGEMLPDEANRCIPRNIITQCV GAPDGIQPDWYAARSTGRFIICSDGLHAQIDRELLADVAASYGDPQVAADMLVQSALDAG GNDNVTVIVLDICGKSSDYSANDDWNVSKIDDHEDIGDLQESTLQTLRAVQ >gi|222441571|gb|ABXX02000002.1| GENE 452 512357 - 514840 2343 827 aa, chain - ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 457 651 399 587 721 80 30.0 2e-14 MSTTGLSTHNTNTGDTGRTTGFGNTFTGTGTGSWADSTHSVIWMSRDGKSQALPYLRRTR ASQYASLLVAALLTLAAASNLIDVYGSATSWALAAIPATIIGSLVALAGTVPALRLWWQM LFMAVAQLVVGPVLFLNDTTIAHIVPTLRTLTQGWMNMLGSFKFILSVEPPTGTADGCLL AVWTICLWFALLTGIFAVTEDGRFTMIAIIPVTANLAICALLGSSSGYYRMFVGTIMALI LVIWISARWKLLELGRWLSSVVIVVLSVALAIGGCLVVDQDRTILRDHYDPPLSPYNYTS PLSGMRSYITNSKDDVLLTVENLPAGSSVRLAVMDRFDGNVWNLSDSTMSSDSSNYRRVG TSITNNAEGKKFTATFTVDKGLSDYWLPMAGAASSVTFDNSENSDSFYYNSDTMSAIYPS RTSEGLTYTETGIMPTVPTDKQIAKTDAAAISQPKAEDVPDCVDKLATAIAGGQSKGGEA AQALAEKLKESGWFSHGLSGDYPSTAGHGNYRIDQLLAGTAMVGDSEQYASAMALMARSL GLPSRVVLGFLPKDDEGEISESRTEEQGTTTITKFTGNDVTAWVEIKLDGYGWVAFYPTP KETKVPDENQNLTPPNPQTLVRQPPVPLTDPLRDDTQAKGKSSIGGSMADETSANLFWQH FGRIARKVAIYGSPLWTLLIICGLLLAIKAIALARSRKHGSTQQRVAAGWQSVAALARQS GLDIRGTRSEQAVSIANQMDISRETLLALGAQADYAAFSGNFVNEEHVQQYWRDIAQERK YMLKSLPTLRRWRAKLSLADVFHFRSNRSGRNNGSDRKHNRKKGRDS >gi|222441571|gb|ABXX02000002.1| GENE 453 514837 - 516021 790 394 aa, chain - ## HITS:1 COG:no KEGG:BAD_1313 NR:ns ## KEGG: BAD_1313 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 393 13 405 406 706 87.0 0 MQRSLRRIKHRIKRLVTSYVSPLGWAVTGLAIASLIAFTILSWHELLTMAIVFACMMVAA IMLSLGNTSFTATIDVSSRRVTVSDTVKVDVCVDNPGRTPTTSARGDLPIGDSHERFAIP MLAAGQSRQTTVEFTAVSRAVLPVGPLSIRKGDPFGLVRHEKKLVDQINVFIHPKTVMLN TLNAGIPRDLEGQPSGEIVDDDLDFYGLREYEPGDDVRNVHWLSSAKTGALMIRQYEATR RTDTALTISVNPDDYVSSDEFELAVSVHASIGVQCLLQNRPVTSHAGTEHIMPRNSTEFL DGCSAISPDISDNPNLAQTTLAHAPDSSFYYITVGRLKNIDEIKHMALALPRSATCVVLQ TAIGQPRAIKRYADFTLATVGNLDDLPMIMGVLE >gi|222441571|gb|ABXX02000002.1| GENE 454 516147 - 517484 1336 445 aa, chain - ## HITS:1 COG:PH0776 KEGG:ns NR:ns ## COG: PH0776 COG0714 # Protein_GI_number: 14590644 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pyrococcus horikoshii # 140 439 10 311 314 291 49.0 2e-78 MSNENDDATQLGSIGRHMSKPQQPGNPQARPAFQAPSLPTHPQEQDGDEEGTVLSTHNAT PSRPTRPTVPMAQPMQAQPTQSAPTQQPLPQSQSAPVMATRQFPQTTAPSVKPAQPAMAS SMMSAPQADITEFHELFAQLVGNVSQVVVGKEQPIRQCATAMIVGGHILLEDNPGTGKTQ LARGLANSIDMSFKRIQFTPDLLPSDVVGVTYYDQKNGEFEYREGPIFASIVLADEINRA SPKTQSALLEVMEEQKVTVDGETHAVPQPFMVIATQNPIEQLGTYKLPEAQMDRFLIKTT IGYPSHDVSVNILKQVNVTDRASTVHAVLTGNDVLRMRAISETVRLDDAIIEYIVRLVEA TRHNERIQVGSSMRGALALTRCARVWAASSNRGYVVPDDVKQLAVAVLAHRITLTAEATF AGSTPEQMIEQILNEVPSPTVGATA >gi|222441571|gb|ABXX02000002.1| GENE 455 517545 - 523580 5471 2011 aa, chain - ## HITS:1 COG:no KEGG:BAD_1311 NR:ns ## KEGG: BAD_1311 # Name: not_defined # Def: fibronectin type III domain-containing protein # Organism: B.adolescentis # Pathway: not_defined # 1 1942 20 1956 2041 2511 76.0 0 MDKRKNAADQPAQSHERQLRFGSMMRKLLLPSGSRRWITPIVMLLLLLGIIAGAFIVSSV TQRHVQLDDGTVWITSLKDRKAARFNAKNKDVDAGVSSAASRFDVAQHDGDTVISEGTKA SNIAASTISETGNTAIKTDIETIIGGNTAAFINTKTGNVWVGSAADVKSVNPTTDKPNMK LGSGGKIAVTHDGTVYGYRTSDGAVLSIKGPQDTREQVGTIGGAPHAESFTVIGETPVVA AKGTVYWPQGSAAINLQGSMTLQAPSTDGKQNGWVAVATPRGLATVNLSTKKTSETPNSG KGEAAQPVSTGGCVFAAWAQKANNYAKVCSVDGSDTAFDTLTNINATSELIFRTNHRLVI LNDVVNGNVWNPQESTKVIKIQWNKVETKQSKQQEQNNDSANNQHNFSKTCSSQSGQIKA EDDSFGARTGSQQILDVLRNDEQTDCSVLRITSVSAPDGANISVSPVYDGRYLQLDASAA SEGSVSFSYEISDGRGQTSNANVSLTLVGGDDNAPQQTDTPPEIDVEQGAAYTTNALGSF SDPDGDPLTLVSATPQNTDQVTVSTRADGQLVFNAGSMSSGRAGIEVTVSDGQQTGTGMV YFSVKPANTLAAVIDPAVKQTTPDTRTTIALKQYVHGTSAEPAQLTAVETPSGASTTMNA TDMSFTFSASNPGTYYVPYTITQGSIPSTGLARIEVQAVTGDSAKPIAANDVALLGADNT AIVEPLSNDVDPMGGVLSVTSVTADAASGIKTGVVSNKRVYITARQVPTEPVQIKYSVAN AAGTSTGVIVLQPPALTTSNSVPKADNITTQVRTDGIVSIDVLDHVTYSDGTTVSLQNDL QYDKNTFKGLVFVSGNTVRYQASDQTGSFPVTYTVKDNLGNAASATITINVHQKDASNKA APTPSDVEAQVAAGQKVQIPITLTGIDADGDDVQLLGLGNKAPTLGRISEVGATYLVYEA YADSTGTDTFSYAVEDWTGQRSQAQIRVGVFTSGTDSGVYARDDEITLRPNTAATVPVAQ NDISGDNTDLAVSENVESQDISNVTVADNALAFTTPQQAGTYYVVYTVKDKAGLSDTATL TVNVDDNATIEPPTAYDYRVPSSATIDKKSIDVDVSQWIANPSGSADELQVAVDDSATDH AHVKGGDKSTTISVELTDEARAVPYTVTNTTYNITSTAFIQVPAYGVFPPTLRPKAPALK VNARETITINIADYVRVGAGKIAYVDGADSVSATKAADGDLYVNDQTLKFTASKDYSGPA SITFTAVDGKRDKNDNVKIINSAVLTLPITVIGRDMPAPTFSSSTIDVVAGESATTIDLT ALTHSASDLYDDEKQYTYSGGTDSDQVSAKVSSNGKLTVSADKTASPGTTVSVPISIQYS KGTVSAGVTVRVTASNRPLARINAKTVKVKAGSSEEVNLLSDAYNPFPDSALTVTGCTSD GASKLTVDCPSNGVVSISASSDIGASTNKVIVNVRDATNTKEREVTGTINVLVMDKPDAP LLSPIAGDPQDGAVNLSWTAGSSNGSPISEYKVSWGGDGSGEKSCGSVTSCQITGLKNGK TYSFKVQAKNEVGWSKESNGVEGTPDKLPDAPTDVKAEASKNTITVTWKALEGNFSAVDK YQVTLSGPNVANPAQEVTGTSITFKFDDNAITDGASYTATVKAHNKVNWSQPSTASNAVS PWGTPDNPTISADQSGDKIVVRGRINDARNSKYQSITVSIEGEDKSVETSAKDYSVEFDI KNEWYYRKLKPTITVVTERSGSLRNEASVSTFTAVDPPTNVKLELNNNTCVATWSRKGGR VTGFVVKAKGYYDDDVHESRAEWPLSGDWSTCDTVSVQQYFIDTSHLSDPAIATDNTVGN KKPAEITLPSSLTWDTQNANIIHVNGGSWEAHGRSVKGQIVITPAGESSHTYDWPANGTL DVSDITSPSGTRCDWEVRVITTAGEPEINATKKSSDPVTGVRYEEKTPDPEPGPTPDNGE TQSSIDTNASAISLRTGLAGKQARGISFTVK >gi|222441571|gb|ABXX02000002.1| GENE 456 523686 - 525113 1208 475 aa, chain - ## HITS:1 COG:Rv3080c_1 KEGG:ns NR:ns ## COG: Rv3080c_1 COG0515 # Protein_GI_number: 15610217 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 9 277 15 287 340 148 36.0 2e-35 MEAMNGIPPQIPGYTFAQKLGSGSEANVYLYQQLSPSRQVAIKVSKGTLDPRAASRFRSE ANFMGRISSHPYILSVYESGITATGNGYTVFEYAPGGNYKTFLESNRLNADQMLTVGINL ASALSTAHREGIIHRDIKPSNILINTHGMPMLADFGIAGTIYGRPGIGYTIAWAPPEVLA KNGGGNESSDIYSLGATLFAMLTGQSPYEYGYSAALGSTRGKERGALLRNIILTDPLPKL NRPDIPPQVERILRKALNKAPEDRYYSAYDFARDMQRAQQELYGHATPTTVEGEPPFPQN LYAQSQANIQVSPTVPKQRSTWAKPLAIVVSAVAAIAAVELAFAYVILPNMDSASDNSSV QIKTPGTHDQDNDSPDSAITTSSVPSVENLAGSYSADGSSVQFTWVNPDPQDGDSYAWSL VGDAGVDPNAQGTTTTDTRISIKPADGSQTCIQVSLIRADRQMSQNPAIACAAKP >gi|222441571|gb|ABXX02000002.1| GENE 457 525295 - 525525 84 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPPNTTSLALLYLTNPEPAKLSRSQPLSNTICGATTPSWHLQQRRQHINGHFHLSQMPVI QQLNVCTLIVATKAVS >gi|222441571|gb|ABXX02000002.1| GENE 458 525527 - 529696 3646 1389 aa, chain + ## HITS:1 COG:Cgl0751_1 KEGG:ns NR:ns ## COG: Cgl0751_1 COG0210 # Protein_GI_number: 19552001 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 619 944 436 740 756 83 26.0 3e-15 MNLEDLDRVTLVAGAPSSGKTEFALGMLVAAMRRYGDGNAVMTVSGRQIADALGDRAIRE LSAVSQARPVTTLPAVAFRLLTAVRSSQGEPLPKLLNGAEQDVIIRKVLASHVEHRQHGD DCATCDLLRTYFAVSEWSGLVADDSTDAFANQLRDMLARMNEIGAKPQFEDMLIARAASR DGMLDERRERLRTQWRLAFALREEYNEAIRSSYPGEYRLDASQLMIDATEAVSGIQEADI ANMLIVDDFQDTTLAGFALLEALHERGVRLLLVGNPDEAVQTFRGSYPEYLFNQAQTRMG ARLERIEGLQTAHEGDTAQTVSNQQGVHGDYRTLVATRVSLSIASTESTDVPLPDRPGKM SDMPGAMPIETLPADDTGARVTPADGSVETALYRSSSEELDDVVWKIKTEHLQRSRVWND MAVIAHDNATVRAFGERLRADGVPVRYSSVTRPLKDEPFVQGLFALIELAELKNQTIAAS TMDLQTAGSYIRSRVALIMGSPLITVGGDQRHEGRPARLASIESAMNALVSLASIVESKA ANHDEDAAEEYDEDDFEDYFEDDFEDDEDAADAAVEQQALLPRLMEDWRDYMTDYHAIRA DGEHDSEHEDEHEGDFALSMEALYVLLMEGNTDRVVDAIASVLGADPQIKAFASLWKVLD KTCESEAKLVSREPQYVLDCAWRACGKAEVWQRVALEHSAAGRAANDRLDAAMRLFNYAS GGESSGEFAVHTIEAFIEQVRLLTIEADSLAHTAPIDQAVTLTTPAGAAGKRWNLVFLPA LQQGQWPNLTPRNTLFGGEELADVMLHGVLSDTIVTPAGRQDAQLASVLASEQKSLLVAL TRASERVVVSAVLNDDNVPSDFLYGYMPECFDRDRDADMERREYASVGGQGDYAGLETDP RGLVAAARSVLASEPEDSPKARDAAEALALLASHGVTAADPDRWPFMGETVEATMRKIAA VMRTGMSDTSESSTSGRNGKSRRSDVVTLSPSAVDNLWACPVCWMLENRFSGPRMGSVAT SFGSLIHKVAQQATEAGLDMPEHHTAISDVDNINAITEWMYAEYKRLCGDFNAIADPAQR YQALKKDEQAQEALRNIATYFVQSNHGDYPIKNNDAFSVGKLTKAEPELKFTAKFDFDDI LDAYNAMDGVHAISRNELIAIMGALVGGWPETGMSEYLTVRLTGRIDRLERREMADGTQQ VRLIDYKTGVSPTGEGLFNDLQLVCYQLGLVFPEESGMRGAQAVANAPNITQSALFHVAK HAYPAPYGDTAAESHMQQALFANGSLNTGEFIPRYYVKKLDKDFHDGLDDMLPPLEVSDE HWNEFLGLRGTMAVWSLTMIARVFYAAAASRANEITARPTTEHVRYCRNTTICPACAGEQ NTVFERRTA >gi|222441571|gb|ABXX02000002.1| GENE 459 529693 - 533826 3302 1377 aa, chain + ## HITS:1 COG:Cgl0752_1 KEGG:ns NR:ns ## COG: Cgl0752_1 COG0210 # Protein_GI_number: 19552002 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 12 924 21 780 812 197 26.0 1e-49 MSGTMKFTDSPEQAAVVQAPSYADVVVVAGAGSGKTYTMTRRIITLIEQGVSPEKILGLT FTRKAASELLSRVSAAVTRDQRERGLKSANMTFLKPEVSTYDAFFQSIVRQYGLLVGFDQ NTQPLSEAGAMQLIHTVLDRHMDDLMAFDGDLKSFNTIAGNVFALSNAISGAMIGGDCTS FDEAVQRVRDWDEAFVEQIAKALDGETVPTEEPKSPKLPKRLKKDSDADYEKKLEKYREL GHDMCVFNSAQLAFVAKQRDLLLDLVLDYHAEKRACNMAEFSDFTIAAFQLVSRFPSIGA AYRKRYSHVLLDEYQDTSTTQAALLSALFHADDTHRSAVSAVGDPFQSIYAWRGASPGAF RMLQHDFGMDATSRPFALTVTRRNSRMVLEAANNLTKPLRLPARRLSSSLMREVDVPALV NTDEAPEGTVGVLAFDTFGQEVDAVVRFAKHAIALHTPSSRDLDNGMKDNRPHVAVLFRS KGIMSQFAEALERAGLTTLVVGRSALLERPAVQDVFALLRVVSDHTDSAALMRLLATPRF SISANDLQALADTAEQVNTMCRYRALVSAGIVQEQSNKEEKPENLGIYGVTPKSGPSDAE IRAIVREYRDQVPNAVFLVDLMLRDDLAELIDGRVSREGTKEVLRAADAIRQVQRMLGHP LPEVVREAIVALNLDIDMQLAEHMRGGQADATLAASRVALAKSPIDALLKLVDTYMQEIA SQGTPSLRAFISWADSLRDAREEHAVAPDVPVDVVLMTVHQSKGLEWDAVAVVGMTDGGF PTNKGSDLRVVVDEEHLNGFQDGVWTPPEYHETAKTWLTDPAAVPVPVRVDADILPRFPH DALVGGNPLEALEMLEDAEIIDDEVFGTLRNMSVDDMEGIDPDGLYLTQIEEYGRRLHAD ERRLAYVALTRARHEALLTCSATNAESRDPRAVGDRKRVSKPSNFLVEVRDSMLNIVSRA AEPSNLADIAEVEDVDSSENGMTSLHSIDAPLPDGFFVGEHARDFEDAVVGDAWNAPLEP SEGNQFLPWPCELSDETLQTLRLSALQVDSAMNNAGGQTDGRAGERAGGQVGEPVGGEGA GRCENTGASLLRCAQLLVADSNLMPDMLGEASQDAFDSAVRAKGERILASGRQNVTSLQA RAGMMDERGARTYWRGLVRPIPNVASPAAQLGTQFHAWAERFIMADANDAGIGVGASGNG GTRVAESRLAMLAELRRNNAAQSQDNQDDNGADNNGIFDWQQRLATSTWARRKPAWAERQ IVVNVPQLGTIVNGKLDAVFFGGLDGADRSKQYTIVDWKTGKKPRKKEEIQKKLAQLDMY RILLSAMEGVPLTAIDACLYYLSEPIEGDRQLNAADKTEEEILAELSYGIPEQSDND >gi|222441571|gb|ABXX02000002.1| GENE 460 533975 - 535351 1273 458 aa, chain + ## HITS:1 COG:AGl1094gl KEGG:ns NR:ns ## COG: AGl1094gl COG0477 # Protein_GI_number: 15890666 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 455 3 392 409 147 28.0 4e-35 MAATSATEIPKSPYSVLFSIPGTKAFCASGALARLPMSMMSLGIILALNHLYDNWTIAGV MSAAYVLSTAAVTPLYARLFDRFGQRKVGSVVLVVQIIAMLGFAFAALVRVPIPLLFALA VVMGLTQFSFGALVRTRWTYVLDRTGNGSLLNTAYALESAIDEIVFIFGPILAAFLAASV HPVSQLFVPTIACAIGGTVFFALRDTQPPVVREITVVSASSDDADVRLAVDGNTGNNGGA NSVQQDKQQDKLTVAQLKSNDNRKKRNVLTYAGVIPLLMVFIVFNMSFTAFDTSMTAVMK ALHLDSLLGVQLAMLAVGSCIGALVFGTRELKGSRWRHMITFLAIITVGFFIIHMCQGNL IMMGVFEILTGLTVSSVFASGNLVMKETVPEESLTEGLAWVSTAGTIGASFGSMTTGIML DHFSPDISLMLPWIFVLASIPFALIGWAVTRRSVSLHS >gi|222441571|gb|ABXX02000002.1| GENE 461 535372 - 536190 1100 272 aa, chain + ## HITS:1 COG:MT2843 KEGG:ns NR:ns ## COG: MT2843 COG0289 # Protein_GI_number: 15842311 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Mycobacterium tuberculosis CDC1551 # 24 272 1 244 245 241 58.0 1e-63 MSETDLKCCSYARTCDMLEGAAMIKVSVVGAKGRMGSHVVDAVNNAADTELALALDAGDD LTQITPGNTDVVVEFTVPSVSLDNVLALVAQGVDVVVGTTGWTDEKLDQVRAALAAAPRE GQSVFIAPNFAISAVLADYFAKVAAPYFESAEVIELHHPNKVDAPSGTAFHTAQGIAAAR KAAGLGPVPDATETDGGSRGQVVDGIHVHAVRLRGLNAHEEALFGNDGEQLTIRADSFDR ISFMPGVLLAVRKVSTGAYPGVTVGLDNFLDL >gi|222441571|gb|ABXX02000002.1| GENE 462 536364 - 536687 272 107 aa, chain - ## HITS:1 COG:MT0200 KEGG:ns NR:ns ## COG: MT0200 COG1937 # Protein_GI_number: 15839569 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 12 107 1 96 96 113 63.0 1e-25 MAEQMQNDQHYVTTQHGYADDQKKIITRLNRIEGQVRGIRQMTEKGEYCIDILTQISAVN SALKSVALLLVDDHLSHCVKQAAAQGGPVSDEKIAEASAAIARLVKS >gi|222441571|gb|ABXX02000002.1| GENE 463 536872 - 539841 2429 989 aa, chain + ## HITS:1 COG:alr1627 KEGG:ns NR:ns ## COG: alr1627 COG2217 # Protein_GI_number: 17229119 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Nostoc sp. PCC 7120 # 106 874 10 749 753 570 43.0 1e-162 MQALIAIIVALAVTVAVLWFFFAPRKAFRARVDNGVQEAVVEVKGGYSPAIIEAEAGLPL RLIFDRKEDGECSSHVVFSDFGIDLALPAFRTTTLTLHPNEPGEYGFACGMNMLHGTLRV VPGKHHAAMQEEHSESEENSNIAESHVHMQSQQTVVDEKSYESAESSNISSDSSDSSNDS SESREMRTLIARLIVSAIVTIPVFGSTMLMLYPMPNWVQFVLMLPVMCYAALPIFRSGFA AIIHRSPEMNALVSLGTVCAFAHSCVVTFIPQILPENAREPYFEAVGVVITLMLVGQLLE ARARVGTGEAMRALAGLQPKNARVVRGEIEEEIPVEQVAVGDIIAIRPGEQLPVDGVVIA GSSAVDESMITGESMLVVKQAGGSVTGATINGTGSLRYRATKVGKDTVLAQIIGLVQSAQ SSKAPVQRMADKISGIFVPIVVLIAVWSCALWFAFGPEPRVVHALVAAVSVLLIACPCAL GLATPLSVTVSTGRAAQMGVLIRSAEALETCGKINAVVLDKTGTITAGKPSLTDVFPLGK WRKMPDDLLAITASAERDSEHPLAAAIVAGAQEEHLTLGEATQFRAISGRGVTAQVALPL ISANNPTVAADESSASSVTFESSISSPETAMYNVAVGNTDLIDDLDVGMPSVGDEDLDDI IATMERLSAEGKTPMLAAIDGELAGIVAVADTVKADSQQAIASLKSRGVNVVMLTGDNGT TARAVADQVGVGNVIAGVRPENKADEIAKLQAQGYTVAMVGDGINDAPALARANVGFAIG TGTDVAIQSADVTLMNGSLMGLVHALDLTRATMRNIAQNLGFALGYNSVGISIAAGVLYP FTGMMLNPMIAGAAMAFSSLCVVTNASRLRLFDPGKALRKTYQVRQPNPNDNNHNNHSQK GFIMGLFSDHKAKKEGMHEGMEGMGGAHSCCGGRTANGNQSAPAKDPVCGMSVDPATAAA TREYNGTTYYFCNPGCAAKFEQNPTQYLA >gi|222441571|gb|ABXX02000002.1| GENE 464 540329 - 541234 984 301 aa, chain + ## HITS:1 COG:ML1513 KEGG:ns NR:ns ## COG: ML1513 COG0329 # Protein_GI_number: 15827797 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mycobacterium leprae # 11 301 9 299 300 234 47.0 2e-61 MTDGTMHLLDPAPFGRILPAMVTPMKADGSVDFEAAQKLAKQLVADGADGLVVNGTTGES PTTHMEEKVELVQAVKDVVSVPVISGAGSNDTAHTVRMVEQTQEAGADAVLVVAPYYSRP SQEGVFRHYKAVNDSADKPIIVYDVPGRTGLHIQLETYRRLAELGHVKAVKDATGDIAGA VRKRMETGLTWYSGDDGLFLPFLSVGAVGIISVIAHAASGPMRDLAAAFDRGDIHGAQRI AVQLAPLVEAMNGNGFQAVMAKASLKVRGILDSTTMRLPNVGPGEAEIKRAEDGMRASGL L >gi|222441571|gb|ABXX02000002.1| GENE 465 541414 - 543525 2369 703 aa, chain + ## HITS:1 COG:ML1512 KEGG:ns NR:ns ## COG: ML1512 COG0595 # Protein_GI_number: 15827796 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Mycobacterium leprae # 133 689 2 558 558 543 50.0 1e-154 MAIEETKTVTTHKRGSKAAKRTENTQTADVQSVKSVSSEKVSKAETTSKKAKSSGRGGGR GNRAGDASGSVRGGSRGNGSGSSKGSKSTKNVKAAKNTKNSRGPKNSSAASSSAGSRRNS RLAPQTTAPQQDDVLIAPPKYRKGSMRIVPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFP EEEQPGVDLILPDFHYIKDRLDKVEALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLA FVEAKCKEHRINPRLVEVKGRDKLKVGPFNLEFVNVTHSIPDALAVFVQTPAGSLIDTGD IKLDQLPLDHRITDLVEFGKLGEKGVDLLMMDSTNAEVPGFVKPETTIGPALDQAFAQAT RKIIVASFSSHVHRVQQVVDAAHKYGRKVVFVGRSMVRNMSIAADLGYLRLPEDTVIDLK KAHDVQDDKLVYMCTGSQGEPMAALGRIADGNHRDITINEFDTVILASSLIPGNEHGVYK IINKLVQLGARVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGMIA VKTGVDPQNVVLAEDGDVVDLYHGQAAVVGSVPCGYVYVDGDSVGELTEDELEKRRILGT EGFVSSFVVVDTETADVVAGPKIYLNAVAEDESEFDKVRHQIVEQLQDAMMAGTHDTYKL QQIMRRTLGSWVARQLHRKPMIVPVVADIAQDVDEAMGLNAAQ >gi|222441571|gb|ABXX02000002.1| GENE 466 543721 - 546330 3546 869 aa, chain + ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 1 867 1 859 861 629 42.0 1e-179 MPGANLTRIEAEERKSVIAAPVHYTVKLDLTRGAKNFGSETTITFDAEPGATSFLDLIAT EVSEIVLNGETLDPAEAFADSRIELKNLEAHNEVTVKALCQYSNTGEGLHRSVDPSDGNI YLYSQFEVPDARRVYAVFDQPDIKAVFDFSVLAAKSWIVTSNMPAASVTDNETVTEEGTL GTHEAETTKLWVFESTPTMSSYLTAICAGPYAEWHTEYANEDGRTVPMSMYCRQALAEAF AKDVDYLFDITKKGFAFYAKTWGVPYPYAKYDQIYVPEYNAGAMENIGMVTIRDQYVFES KVTDAYAERRVVTVLHELAHMWFGDYVTMKWWNDLWLNESFAEFTSTLATAEATEWKDAW ATFSSGEKSWALRQDQLSTTHPIVAPINDLNDTYVNFDGITYAKGASVLKQLVFYVGREK FFKGINNYLNKHAYSNATLADLLAELELTSGRDLKAWSAQWLEQSGINTIATEVEENEDG TIRQLALRQSASTEHPVLRAHRLAVGFYNEDPETGKIVRTDQFELDVDGELTIVEAAAGK ARPALILVNDDDLTYTKLRFDEKSLKFAAENLYRFDDALARSVIWLAFWDMTRDGELPAK QFIETSLAALATEHESTTFRYALAQVSTTAWHYTAPADRAEVVEHVAAELFKLAQAAEAG SDEQFQLITAYLGYGEPGDAAFEANAKGLLDGSVKLDGLEIDNNFRWTIINALSAINAIG QSDIDAELAKRETTENREFALGARAVAGTAEAKEWAWNEALHNDELTNMQLESVARGFAS TPRVDLAEPYAAKYFEVADWIWQNKTFHMAEALLEGLYPSYADPATLVDLGDAWLASHAD ADNALQRIVRGNVESSHRTLKVRDFNASL >gi|222441571|gb|ABXX02000002.1| GENE 467 546559 - 547368 620 269 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351780|ref|ZP_03742803.1| ## NR: gi|225351780|ref|ZP_03742803.1| hypothetical protein BIFPSEUDO_03377 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03377 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 269 1 269 269 553 100.0 1e-156 MSLVSERDGFFGWRQVDDPYSLEERGWVEDVGSTGSYYPLPRWLVYMCMGGWNEPIRGWT GGLYEKHCYCRSAHHRDGWDGVVLDSEPLYYDEFADGGRYRFRSVDPMISRFGLRGVAVR APFPLTVDLNLFQYAACSVGELAWTPYADLRNGSCSKRMLDLMNTFPHKPGFFVYKGYLY AWINRMLQAGREPHVAMHCALEPYTELELFRAYRVYYEQLQREIPAPCMGDIVWPDQCDP RFPLENDPRAAHYGMWVYSGGLSYGGKTS >gi|222441571|gb|ABXX02000002.1| GENE 468 547530 - 550208 970 892 aa, chain - ## HITS:1 COG:BH1491 KEGG:ns NR:ns ## COG: BH1491 COG1404 # Protein_GI_number: 15614054 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 505 806 297 582 588 118 29.0 4e-26 MANKKDLAEAQSYSRRRLVTAFSSGIPDGVELTPKKNQSPVIAGVGLTVIAILVSLFYGM VSPSLPDGWENNKLIVAKNSAARYVSSNGTLHPVINAISARLLIPSSDFKVLTVADDQLK NIPIGSTIGILGAPDSLPEENNLIAGSINSCVSDSNITTTLSNASSQVTDTATAIVANVD GISYLVNGSHRYQLPQEATLRDAFLRAFGIPETASTDATAQWINLFEQGSPIEQISVDGA GNSITVHGVEALVGSVVMQQGDAKKTKYVVRSDGSLSPLTDFTYGLYITGKTDEFTQPNV LSAADFQFFSNSTESAIPEDWPSEELSATSGNVSACAIYNLETAGRKKADTHVNLAVKQN NSAHSGTSKTNPSSNTSSTVKLKGGTGALLQASIGTSDKGYIFAVDSTGTAYPIANANKE TLKRLGYAKNDVQAIPRAWIDLFSQGVELSAQAAGSAPGSNQSSASQTNDGGNASSSTAD TTTDAATNATDDPETGAASADAQAQCQAGVENYINDTPWTNTLFDFETLHRQSTGKGVTV AVVDSGVDVDNPHLANAVTPGVSHISGDATNGMTDIYSHGTIIAGIIAARAVDGSSVEGF APDATILPIRIFESLHEENGKQTGGPSMEDVSKAVIEAVDHHAQIINISLSDITDLPQMR RAVDYAESHGSLIISSAGNRLTSASTKDGRRFPAAYSQVVGVTAVDTDLNITDDSVHGTQ VDIAAPGAYVASTVPGGVDCLYATDAASTSFATAYVSGAAALIASQYPNETPAQWRQRLL VSANRPNSDQRDNNIGWGLVDPQTALNIALSDSLRGPTSTGGMHAQNNAETSMKPLVLHK IQDPDTNFKRFVEAASIAVFCAYMVAWLVRTARKTARKNTSQSISTNEHSFN >gi|222441571|gb|ABXX02000002.1| GENE 469 550217 - 551608 872 463 aa, chain - ## HITS:1 COG:no KEGG:BDP_1576 NR:ns ## KEGG: BDP_1576 # Name: not_defined # Def: CD9/CD37/CD63 antigen # Organism: B.dentium # Pathway: not_defined # 27 463 2 438 438 548 67.0 1e-154 MNISLPPLPHGRQNTPSSPPINTTDTLQITVSYKTRTIALRVNDGPIIADLLPDIARRLG ILDPSIVYGGYRLLTSDGDPLSPAKTLREQHVPNHSTLTLEPGASSDTDIIYDDVVEAVG ASVQHVYRPWTSDHTTFTSLVIGLGMLVISAGWIALSPASIWASVLAFGFSAILLALTAA LCGKNLLVQSTAIGLIASIFTAIGGYQLVNLLAGKQPLHALPLLGASLGLAAAGILMSLA ASKTRPYSYIPILIGAICAIPSVLSTLMPQQMGHIWILTSAVTALTASALPWMCLSFARI SVDSPHSESEIFALPNDIDYQDIKRRYIAGSTMLFIGRICVAALLLIAAPLLNTLDTPLG SALCLAAFLGMLLDSRQIYTFREMCVTVGAAGIGIIVTGSLSVQTHQEFSIPLILLMLAC AFATILFTYVLRKHTLFATRVADAAETICIMLILPLAYLAITL >gi|222441571|gb|ABXX02000002.1| GENE 470 551928 - 552239 351 103 aa, chain + ## HITS:1 COG:no KEGG:BDP_1575 NR:ns ## KEGG: BDP_1575 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 103 1 103 103 132 85.0 5e-30 MAEQIRAEEGAIEKGATAVDNARSGIENRIKDIEAKMAELGSFWSGDAAVSFNALMSSWQ EKATSLNNILIDLSDNLRGTAKDQAANEEDNQSRTSKLQALLG >gi|222441571|gb|ABXX02000002.1| GENE 471 552282 - 552569 444 95 aa, chain + ## HITS:1 COG:no KEGG:BDP_1574 NR:ns ## KEGG: BDP_1574 # Name: glnD # Def: [protein-PII] uridylyltransferase # Organism: B.dentium # Pathway: not_defined # 2 95 1 94 94 123 85.0 2e-27 MVSSFSVRPEQVDVLASDIAADAKSIAQELENLNSQVSALIGQWDGSAREAYHQAQRNWD GKLQEMNQILGQISQATSQIAQQYVESDARSAGRF >gi|222441571|gb|ABXX02000002.1| GENE 472 552666 - 553136 304 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351786|ref|ZP_03742809.1| ## NR: gi|225351786|ref|ZP_03742809.1| hypothetical protein BIFPSEUDO_03383 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03383 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 156 1 156 156 266 100.0 4e-70 MVVEIKADVDNARAIANDMDSYGESVSESAGRCGQEAYSRDTAFGKEFMRSASAYTRLLQ GTGANIGEAMSGFSQRVCSAAKIFEQAEEQQVASINKAEVTVQEAAPVVGKTKGKASDIH ETSKKNESDEAFEPLLSLVDSVVNVLSIPPLPPKTL >gi|222441571|gb|ABXX02000002.1| GENE 473 553194 - 554975 1354 593 aa, chain + ## HITS:1 COG:BS_epr KEGG:ns NR:ns ## COG: BS_epr COG1404 # Protein_GI_number: 16080891 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus subtilis # 35 359 102 376 645 69 27.0 2e-11 MTRDLCASHVRKVRGVVSALVAVLACVGLCVPSAVASDGVDWRIDDMGVRDAWAQGITGK GVKVAVLDDPIVSDYPALAGADVSYKLMTESNQPCHRKSDPSQTTSADDPTLDSSSGFVI THGTSVVSLIVGNGNGWDGGAGIQGIAPGASVTAYMVFYQREGRLGGGADICVDDAGKGV DLDKPSIRDAVSSGARIINMSYVDDIGDPSGVRDDILYALRHGVVVVSARDNSVRAGMYD LVGEPGMNNYFPGEVTVNAVDSAGNLQESSDVMDGNVSVLSPGVGVPSYRSTDSREMDLT GGGTSTAAANLSAYLALVMQRWPDATGNQILQSLIRNTKGNASSGPKLDPEHKRGFGIVD PGKLLSVDPAQYPDVNPLLEWAVKTSGEHEETKGMYEYPSPLGEHGVADTGEFSPDGDTV MYTPDTALVGRELQRQQAAWEKVESCRADGGSDCMKYSATATADEEDGKVAGDMASDASG SSVVPSWVVPVVLAGAGVLVLAGVVLAVVLVRRMRRARDAGRIVPAGPVGGSGVPPVPYG VAPPYVGPAARSAPVTGSYPNAGAPAGYTYPPTQAGNGQVGQHVPQPPLPPRQ >gi|222441571|gb|ABXX02000002.1| GENE 474 555011 - 556516 819 501 aa, chain + ## HITS:1 COG:no KEGG:BDP_1571 NR:ns ## KEGG: BDP_1571 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 312 501 276 460 460 156 55.0 2e-36 METYEEKLSDIANTAKWSIEEFDDFKRFERVIDDAAAKLKTMKKELEEGYVFGGETQKVA LECVREISKGIEEANIPTALSDLFRIVDACNQAIDDARNVELPGTRLTSDIEQAIKSAET PLNIIVPGLGTLTGIIGEAGVNIISNMLANEREKKAEAEFERIELERKENYPRRRVNEAP VVDINGLWPAQDGENNSSEIEDVYPASFGDAGISAAVAGSAGLAAAGGAAVASSKFSNTP KSGSASISRPNVSPTPPLPPRNNPTDAADTGGDNNNSHNGRMFDPNTGEWIDTSKYVYDP ASGRWLDRNLYVYDPATGRYVYRNHMAVDSDMSYNGSGSAHGGMSGGSAGSGSGIGRTAV AAGAGAGIGAGGALAVSKLAGGAGSSSGALSEASMAAVSGSGVGSYYANNPVKASIASSS IKGATGMAAGLRKGEIARAEAAASSRANTPGMMGMGRGGASQSKDKRRNSLGYIAPTIEE EEEFQPKPLAAMAGHRRRPGE >gi|222441571|gb|ABXX02000002.1| GENE 475 556600 - 557757 429 385 aa, chain + ## HITS:1 COG:no KEGG:BDP_1570 NR:ns ## KEGG: BDP_1570 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 224 385 14 175 175 182 59.0 2e-44 MSSSCICVDPSDLETSAKNYEQAAQQFAMAKAQFVSAGTPNFGLILKCLEPAYEAAKQST QEYLANVEAMLKLIASAIQGTVEDSTTTEEEILEALKKILQLLQQVDDKLDSSDPHNARS EGNGGIGGNSGYGGSFGNGGGSRADSLQSKQYQPVDQFNGRSDGGSEAAGSPASSATGSG AMASGSQEFGHDQKKTTSDGARDAAESNTYPIFNEVPLPTRPTTIGLDVDGNAKDDYSLN LTDGNTHAVIGADGSVTLTKRDNSTIPMPSDASKTGSASFDLDVDNDGVDDVSMNSDSGA NARFSVYEDEDSRYVALDYDNDGDYDVAVRVGDSEAAREAMRKQAEDEAWQSIAAKDPLG RTADELRALYEDRETIQLPERTTIQ >gi|222441571|gb|ABXX02000002.1| GENE 476 557834 - 558886 765 350 aa, chain + ## HITS:1 COG:no KEGG:BDP_1569 NR:ns ## KEGG: BDP_1569 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 91 318 23 255 287 172 40.0 2e-41 MAAKEDDGSANDLHFGPITIDVPDDLSDIKRDLKFYQKVGEAYDSRKVGKAASALLSGQK FGYTSADKVVGRILEKTGLDKKDIGRKSQKFEDASKRFTESLEGDLTRQSAHDLAKTLDS RITTLRIAISGVDFICKALFGVSPIDEWVRKPFFGDWDELRDTAGKWQSLAETLPEVQTA LLEISNSLDETVWSGQAADIYVVRNEAVADALVEAPEPCSEMAQALNALADNAEKTLNLI FDTLSEIISLLKLIAGELIIPGAGPVLATVTVAAEVTQAIQWASDIVEYLNNLYEALNGL CVCLMVMQRLSVKTEGMLSVFGGGTSNGGTGSTSNDVAFAGASGGSSDGR >gi|222441571|gb|ABXX02000002.1| GENE 477 558984 - 559412 358 142 aa, chain + ## HITS:1 COG:no KEGG:BDP_1568 NR:ns ## KEGG: BDP_1568 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 10 137 1 128 129 117 59.0 2e-25 MTSAEFEAFMNQMDSLSARLDKQRAKFEKEKVQIDEKIAEKTKELENKRRKGECGRAWQV LQQRIDMGKTCEEDILAGIDKSPEAREVRGYLAQNMSYVRDSVEDADDEDNEAAQARVAL DKGMTRLREWESQYAAQRNQAS >gi|222441571|gb|ABXX02000002.1| GENE 478 559384 - 560526 644 380 aa, chain + ## HITS:1 COG:no KEGG:BDP_1567 NR:ns ## KEGG: BDP_1567 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 17 380 1 366 366 332 51.0 2e-89 MRHKETKPADLQAICIVSLVCAVLFAGIAVTVLSESVLLPGGDERMRGLPVLLVASLILL MLFCDRLCVVSIRSHEQTVALVAMACAVLLSVCAGVAASCVEPCAQPIAAAVFLSSSCVC LNMSLMTVCIDQPVLNGVISACFAVSLLLLLVSTGTLMCSLDVRLLAGLVLAAAICCLQM LPNIVVHVPDRYLVQWRAYMTRRWTVRGGIPEEARVLTQVDIREDMQTFQARYATGFVLC LALLVLPYAALVAFCDFHRMYDAVGFLVLTAALFLFLTLKPRRSGRPFERYCMRLSAVMV MAMACVRAWGFMTTENMRLLGVCAIGLIGVLLVYAIPVQKGGFHSLVLSRAGDALCFLSM MVTPVAAFFAAGALQYIRGL >gi|222441571|gb|ABXX02000002.1| GENE 479 560526 - 561560 449 344 aa, chain + ## HITS:1 COG:no KEGG:BDP_1566 NR:ns ## KEGG: BDP_1566 # Name: not_defined # Def: transRDD family protein # Organism: B.dentium # Pathway: not_defined # 30 344 1 295 300 293 52.0 6e-78 MSDSNSVMRCRPAGAGKQCAAAFVDCGFVLLCGVIAALLGHNIPVTFLVMLESVAVLAIG EGSRGLTPGNMMFGLRTVRVEGMRDVTAGTLPAGMGRILVKYCVLIGSTLALVIGLIAVI CSPLFAKDDLHQGWADRLASLGCVDIHQRVEALEEQPVVSRQIPPVPMPRMQPTPPVPLP KTVADVSKPVPMPTAKQVSPVPMPSGKPMYPVRTTVEQQTASVPVTPPEKPQTFLFFEDG SKRTLSVPSSLILGRKPAPQQTGDIALAVPDHTGTVSRNHARIELVDDQIWITDLASTNG TRVLDESGEETELEPNVRTRMHVGSRIGLGDMGCSIITSKSRRR >gi|222441571|gb|ABXX02000002.1| GENE 480 561560 - 565486 3369 1308 aa, chain + ## HITS:1 COG:Rv3447c KEGG:ns NR:ns ## COG: Rv3447c COG1674 # Protein_GI_number: 15610583 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium tuberculosis H37Rv # 14 1291 4 1220 1236 805 38.0 0 MAITAEQQNSRLEGPKPPKGKIVLQAPPELEPSDGVNTLLTSLVPLLGTASAMVMMLMTN SGLTGMLTGGMFMVSSLGFVAVNGFRQRSQRMANLAAARREYLTYLAGIRKTVRTAGRKQ RNAALWNAPSPSSLTAIAQEPERCWERVPADDDFMILRCGTHSVPLCLQLESPELPPLAQ LDPVSASAAHRFMLAHKTLHNMPYGIDLRKYKRVELLGNESQTQALARAMICQAAVWHPA ECCRVLVLASADRMGQWEWVRLLPHNRVLNEKYLEGTYNGHGFMLTSNVREVDALIGEEV LNRNRRTGDNEIAPHVLVINDGFDRTVLSRESRLFAEDGLGGVTVFDMPNDWGELEEDDV LRVLYSQTVVEEGLNVLEKRDINMVEVFSTALKPVEIQPDELTVEEALCIAKRLKSVHVN ETGDDSSQSVNRKKSPELPDLLGISDIRHIDLAKLWAYRVGKERLRVPIGLFDDTSTAFL DIKEMGQHGMGPHGVLVGATGSGKSEVLRTLVLSLALSHSPDQLNFVLIDFKGGATFAGM DGMPHISSIITNLGKEASLVDRMEDALDGEVNRRQELLRDAGNLANITEYEEMRVNGGRS DLKPLPSLLVVVDEFSELLKAKPEIVQSFVRIGAVGRSLGIHLLIASQRLEQGKLRGLDE HLSYRIGLKTFSATESRAVLGITDAYDLPSLSGIGYLKSPDGTITRFRASYVSGVPKGLD GETTTFQYAVEQMRGKGNPAHVVWLPPLVTPNSLDDFMPDLTVTKEYGLISPRWRNAGAL VVPCALEDKPREQRRDVMALNLAGAGGHVAVVGGPLSGKSMMLRSIVASLALTHSPLEVQ FYVIDCGGGAFSSMDGLEHVSGIAAGNEDEKVRRTLAEVSGIIDARERFFKEQRIDGMDA YRRRRAEGKVDDGYGDVFLVIDGWGVFRGDYDELETKVQQIVARGLTFGVHVLFSANRWM EIRANISDLIGTKLELRLGDPSDSQIDRHVADTVPKGAPGRGLSANKLHTLAALPRIDGG HDAATVSDGINDLIAKVRSAWQGHPHGPKLRLLPENLPYEAMMASVMRQKASNQLAKGNM VVGIDENALSPVVFDFNTEPHCYLFGDAGSGKSTFLRVIINEIVRSYPDGKAKIFMLDYR RANLAQIPQSHFGAYLTNDEQATESLDALAEFLKTRIPGQDVTAEQLRDRSWWTGSEVYV LVDDYDLVSTSRGNPLRALVPYLAQASDLGLHVVVARRTGGASRAMYDPVLQTFHDLGMT GILLSGDSNEGQLIGKVKPKKAAPGRAQIVTRDQGLFVAQLSNAVLRE >gi|222441571|gb|ABXX02000002.1| GENE 481 565672 - 567054 1709 460 aa, chain + ## HITS:1 COG:CAC0484 KEGG:ns NR:ns ## COG: CAC0484 COG1109 # Protein_GI_number: 15893775 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Clostridium acetobutylicum # 1 457 1 446 448 398 50.0 1e-110 MPRMFGTDGVRGLANRALTAQLALDLGDAAVRVLGDDGDKSEFDGRRRALVGRDTRVSGD FLAAALSAGMSAGGFDVIDAGIIPTPGVAYLTSVLNVEMGAVISASHNPMPDNGIKFFAR GGFKLPDTKEDEIENVLGQDWERPTGAGVGRISHDTATATNLYIDHLVSTIAPIGPDKSQ PTPLKGLKVVADCANGATSVVAPEALRRAGADVIVINASPDGYNINKNAGSTHPEQLQAM VKASGADLGVAFDGDADRCLAVDGEGNMVNGDQIMGILARAKKNAGKLNHDTLVVTVMSN LGLKLALRSMGIKTVQTGVGDRYVLEEMLRGDYSLGGEQSGHVINREFATTGDGTLTALT LCNEVVNSGKSLKELASDFPQLPQTLINVPNVDKLAAKTNAKVQAAVEREEKMLGDTGRV LLRPSGTEPLVRVMAEAETQQQADEVCDRLAKVVAEELAL >gi|222441571|gb|ABXX02000002.1| GENE 482 567118 - 567774 919 218 aa, chain + ## HITS:1 COG:all2007 KEGG:ns NR:ns ## COG: all2007 COG0242 # Protein_GI_number: 17229499 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Nostoc sp. PCC 7120 # 27 187 4 159 179 89 36.0 5e-18 MFGRNSKVSLELNREVEKLIKTGGKEQLLPIVQAGEPVLRQQTAAYEGQLSRKTLDKLIE TMRVTMIEAPGVGLAATQIGLGLALAVVEDHVRDDDDDDPREAAEFPFHVIINPSYEPIG TETRSFYEGCLSFDGYQAVRKRWLDIIARWQDEDGKQHEEHLHGWPARIFQHETDHLSGE LYIDKAEIRSLATNENLEDFWCDDPVPTEAAAELGFEL >gi|222441571|gb|ABXX02000002.1| GENE 483 568309 - 569829 1221 506 aa, chain + ## HITS:1 COG:no KEGG:BAD_1292 NR:ns ## KEGG: BAD_1292 # Name: not_defined # Def: DNA polymerase III # Organism: B.adolescentis # Pathway: not_defined # 1 505 1 513 514 736 74.0 0 MNEAKTGRSWLTEAKQDISQWSASMPKNADNERIDWHWVMSLDLERGIGAAKSQGIDLIA VLNAAGTTFSSTSEKTDPMQDSVLSVQQLHNLLKKDLAVRDRLESIIAQCNTTFMTDFDR LIASYRLPRALAYANRRLCDEIAVLRRIGAAMGLWTIAEERRERVIVPVLQSVAGAESLV NLNDIQDRTAQIVNGRAERRAAEREQKRASDYAMSRANLSGVTSPGGSKVFDYGSLGSAG GSADSAEAAQDRRLADYKKSDWRDAYLPGRDVDTVMGIDIETTGTDPARVYIIDAGFEFM NMISPRPAGEPAGYRYEQDYYETGDAYGQARLSFGVPTQNALLGNPLILDLTGIDVRDRA SADFRLFDEWPEAQIGLLQRLEQQPYVAHNARFEHSFFMLNVAGYAESYRAGNITIIDTL PMSRRWDEGSIPDDEHPHGNNTLDAYAKRQGALDASKSERHLGLEDTHIMLVAMKHHLGV LHAEGRGPWGAGGRPGNGGKRCGKRW Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:11:22 2011 Seq name: gi|222441570|gb|ABXX02000003.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont2.1, whole genome shotgun sequence Length of sequence - 542302 bp Number of predicted genes - 545, with homology - 500 Number of transcription units - 271, operones - 130 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 132 84 ## EUBREC_0882 hypothetical protein 2 1 Op 2 . - CDS 141 - 323 87 ## COG0732 Restriction endonuclease S subunits - Prom 455 - 514 2.4 3 2 Op 1 . - CDS 730 - 1218 276 ## COG3236 Uncharacterized protein conserved in bacteria 4 2 Op 2 . - CDS 1215 - 1631 482 ## EUBREC_0883 hypothetical protein 5 2 Op 3 . - CDS 1643 - 2290 311 ## PROTEIN SUPPORTED gi|23335919|ref|ZP_00121150.1| COG0081: Ribosomal protein L1 6 2 Op 4 27/0.000 - CDS 2299 - 2898 336 ## COG0732 Restriction endonuclease S subunits 7 2 Op 5 . - CDS 2900 - 5461 2964 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 5522 - 5581 1.8 + Prom 6037 - 6096 1.6 8 3 Op 1 . + CDS 6129 - 9314 3000 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 9 3 Op 2 . + CDS 9343 - 10089 922 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 10 4 Op 1 . + CDS 10304 - 11116 796 ## BAD_0620 hypothetical protein 11 4 Op 2 . + CDS 11277 - 12566 663 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 12588 - 12630 11.1 + Prom 12600 - 12659 2.2 12 5 Tu 1 . + CDS 12738 - 13448 804 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 13517 - 13545 -0.0 - Term 13254 - 13296 0.1 13 6 Tu 1 . - CDS 13326 - 13553 149 ## 14 7 Tu 1 . + CDS 13555 - 15627 2196 ## COG0513 Superfamily II DNA and RNA helicases + Term 15672 - 15732 20.4 - Term 15657 - 15722 24.0 15 8 Op 1 1/0.042 - CDS 15769 - 16557 982 ## COG0390 ABC-type uncharacterized transport system, permease component 16 8 Op 2 . - CDS 16554 - 17390 185 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 17193 - 17252 1.6 17 9 Tu 1 . + CDS 17428 - 17697 287 ## gi|225351820|ref|ZP_03742843.1| hypothetical protein BIFPSEUDO_03421 18 10 Op 1 . + CDS 18004 - 18666 377 ## BDP_0844 hypothetical protein 19 10 Op 2 3/0.000 + CDS 18584 - 19240 402 ## COG0627 Predicted esterase 20 10 Op 3 . + CDS 19265 - 21811 1985 ## COG2898 Uncharacterized conserved protein 21 10 Op 4 . + CDS 21898 - 23361 1834 ## COG0362 6-phosphogluconate dehydrogenase + Term 23406 - 23449 7.0 - Term 23394 - 23437 3.2 22 11 Tu 1 . - CDS 23496 - 24293 651 ## COG0300 Short-chain dehydrogenases of various substrate specificities - Prom 24394 - 24453 4.2 + Prom 24403 - 24462 3.6 23 12 Tu 1 . + CDS 24651 - 25832 828 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 25867 - 25898 0.0 24 13 Op 1 5/0.000 + CDS 25973 - 27535 1251 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 25 13 Op 2 4/0.000 + CDS 27544 - 28488 947 ## COG3429 Glucose-6-P dehydrogenase subunit 26 13 Op 3 . + CDS 28517 - 29323 753 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 27 14 Op 1 . + CDS 29537 - 31267 1529 ## COG0477 Permeases of the major facilitator superfamily 28 14 Op 2 . + CDS 31388 - 31858 512 ## COG1490 D-Tyr-tRNAtyr deacylase + Term 31897 - 31949 14.2 - Term 31885 - 31936 6.0 29 15 Tu 1 . - CDS 31961 - 32812 667 ## BAD_0636 hypothetical protein - Prom 32985 - 33044 2.8 + Prom 32929 - 32988 2.1 30 16 Op 1 8/0.000 + CDS 33065 - 33862 921 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 31 16 Op 2 . + CDS 33859 - 34194 424 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) + Prom 34207 - 34266 2.5 32 17 Op 1 . + CDS 34394 - 36802 3105 ## COG1966 Carbon starvation protein, predicted membrane protein 33 17 Op 2 . + CDS 36802 - 37029 257 ## BLD_0645 hypothetical protein + Term 37050 - 37096 13.5 - Term 37124 - 37159 1.5 34 18 Tu 1 . - CDS 37170 - 38405 1178 ## COG1472 Beta-glucosidase-related glycosidases - Prom 38498 - 38557 3.5 + Prom 38364 - 38423 1.9 35 19 Op 1 . + CDS 38560 - 41811 3901 ## COG1615 Uncharacterized conserved protein 36 19 Op 2 . + CDS 41891 - 42430 481 ## COG1247 Sortase and related acyltransferases 37 19 Op 3 7/0.000 + CDS 42518 - 43117 645 ## COG0193 Peptidyl-tRNA hydrolase 38 19 Op 4 1/0.042 + CDS 43107 - 46655 3109 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Term 46674 - 46733 20.8 + Prom 46700 - 46759 3.3 39 20 Tu 1 . + CDS 46793 - 48091 1866 ## COG0148 Enolase + Term 48127 - 48168 8.5 40 21 Op 1 . + CDS 48170 - 48733 452 ## BAD_0646 hypothetical protein 41 21 Op 2 4/0.000 + CDS 48742 - 49308 664 ## COG1507 Uncharacterized conserved protein 42 21 Op 3 . + CDS 49336 - 50331 1094 ## COG0248 Exopolyphosphatase + Term 50349 - 50381 1.4 + TRNA 50372 - 50454 67.9 # Leu TAA 0 0 + Prom 50379 - 50438 80.4 43 22 Op 1 . + CDS 50555 - 51130 624 ## BAD_0649 Cd efflux system component 44 22 Op 2 . + CDS 51164 - 52624 1056 ## COG1760 L-serine deaminase + Term 52632 - 52667 -1.0 45 22 Op 3 . + CDS 52676 - 53083 546 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 46 22 Op 4 . + CDS 53126 - 53605 656 ## COG0782 Transcription elongation factor + Term 53655 - 53701 5.1 - Term 53642 - 53687 3.1 47 23 Tu 1 . - CDS 53731 - 54672 867 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 54897 - 54956 1.7 + Prom 54524 - 54583 2.4 48 24 Tu 1 . + CDS 54733 - 56238 1382 ## COG3920 Signal transduction histidine kinase + Term 56247 - 56302 18.4 - Term 56235 - 56290 18.4 49 25 Op 1 . - CDS 56341 - 56619 410 ## BLJ_0697 transcription factor WhiB - Prom 56659 - 56718 2.0 50 25 Op 2 . - CDS 56725 - 58500 1236 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 51 25 Op 3 . - CDS 58585 - 59526 941 ## COG1316 Transcriptional regulator 52 26 Op 1 . + CDS 59513 - 59671 114 ## 53 26 Op 2 . + CDS 59712 - 59966 76 ## gi|225351857|ref|ZP_03742880.1| hypothetical protein BIFPSEUDO_03459 + Term 59971 - 60013 3.5 - Term 60023 - 60076 12.2 54 27 Op 1 . - CDS 60089 - 61519 1335 ## COG1316 Transcriptional regulator - Prom 61591 - 61650 3.0 55 27 Op 2 . - CDS 61684 - 61872 103 ## - Prom 62113 - 62172 4.8 + Prom 61686 - 61745 6.0 56 28 Op 1 . + CDS 61783 - 62082 476 ## BAD_0659 WhiB-type transcription regulator 57 28 Op 2 . + CDS 62116 - 65217 2537 ## BAD_0660 hypothetical protein 58 28 Op 3 . + CDS 65214 - 66746 1093 ## BAD_0661 hypothetical protein 59 29 Tu 1 . - CDS 66747 - 67067 286 ## BDP_0888 hypothetical protein - Prom 67198 - 67257 2.2 + Prom 67135 - 67194 2.4 60 30 Op 1 1/0.042 + CDS 67254 - 68060 647 ## COG0561 Predicted hydrolases of the HAD superfamily 61 30 Op 2 . + CDS 68108 - 68830 186 ## COG1040 Predicted amidophosphoribosyltransferases 62 31 Op 1 40/0.000 - CDS 68844 - 69920 883 ## COG0642 Signal transduction histidine kinase 63 31 Op 2 . - CDS 69940 - 70668 778 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 64 31 Op 3 . - CDS 70684 - 72939 2398 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 72982 - 73041 1.7 + Prom 72988 - 73047 4.0 65 32 Op 1 1/0.042 + CDS 73077 - 73673 691 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD 66 32 Op 2 . + CDS 73682 - 74179 430 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 67 33 Op 1 42/0.000 - CDS 74216 - 75052 934 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 68 33 Op 2 25/0.000 - CDS 75055 - 75918 863 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component - Prom 76002 - 76061 1.9 - Term 76090 - 76131 6.3 69 33 Op 3 . - CDS 76145 - 77233 862 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 77311 - 77370 3.5 70 34 Tu 1 . + CDS 77374 - 78249 954 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Term 78285 - 78322 8.0 + Prom 78284 - 78343 2.8 71 35 Op 1 3/0.000 + CDS 78417 - 79892 2459 ## PROTEIN SUPPORTED gi|119025692|ref|YP_909537.1| 30S ribosomal protein S1 + Term 79896 - 79941 1.2 72 35 Op 2 . + CDS 80014 - 80646 324 ## COG0237 Dephospho-CoA kinase 73 35 Op 3 . + CDS 80649 - 82760 2033 ## COG0556 Helicase subunit of the DNA excision repair complex 74 35 Op 4 . + CDS 82799 - 83782 1187 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 83789 - 83830 9.7 + Prom 83840 - 83899 2.3 75 36 Tu 1 . + CDS 83955 - 85397 2051 ## COG0469 Pyruvate kinase + Term 85429 - 85485 16.0 + TRNA 85615 - 85691 50.5 # Leu CAA 0 0 - Term 85692 - 85731 11.4 76 37 Op 1 . - CDS 85784 - 86020 83 ## gi|225351880|ref|ZP_03742903.1| hypothetical protein BIFPSEUDO_03483 77 37 Op 2 . - CDS 85948 - 86175 109 ## 78 38 Tu 1 . + CDS 86310 - 86543 103 ## gi|225351881|ref|ZP_03742904.1| hypothetical protein BIFPSEUDO_03484 + Term 86613 - 86653 -0.4 79 39 Tu 1 . - CDS 86729 - 87769 1029 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Prom 87800 - 87859 3.2 80 40 Tu 1 . - CDS 87891 - 88757 577 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase 81 41 Tu 1 . + CDS 89090 - 89854 982 ## COG3707 Response regulator with putative antiterminator output domain + Term 89879 - 89939 1.1 82 42 Op 1 . + CDS 90004 - 92697 2269 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 83 42 Op 2 . + CDS 92762 - 93667 804 ## COG0327 Uncharacterized conserved protein 84 42 Op 3 . + CDS 93674 - 94333 432 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 85 42 Op 4 . + CDS 94395 - 96539 2111 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Term 96568 - 96625 23.5 - Term 96618 - 96644 -0.3 86 43 Tu 1 . - CDS 96656 - 97825 1013 ## BAD_0684 hypothetical protein - Prom 97965 - 98024 80.3 + TRNA 97946 - 98022 93.0 # Pro TGG 0 0 87 44 Tu 1 . + CDS 98266 - 99606 989 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Term 99664 - 99707 11.6 - Term 99643 - 99701 13.2 88 45 Tu 1 . - CDS 99759 - 99995 70 ## - Prom 100064 - 100123 8.5 + Prom 100138 - 100197 8.6 89 46 Op 1 . + CDS 100338 - 101396 852 ## BP951000_1186 transposase-like protein 90 46 Op 2 . + CDS 101452 - 101631 279 ## BBIF_0457 hypothetical protein with RelB antitoxin domain 91 46 Op 3 . + CDS 101621 - 102730 837 ## sce7361 adenine DNA methyltransferase (EC:2.1.1.72) 92 46 Op 4 . + CDS 102727 - 103659 634 ## RoseRS_2182 hypothetical protein + Term 103671 - 103721 8.1 93 47 Op 1 8/0.000 + CDS 103801 - 104169 199 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 94 47 Op 2 . + CDS 104201 - 104626 164 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 104656 - 104692 7.3 - Term 104637 - 104687 12.4 95 48 Tu 1 . - CDS 104697 - 104873 145 ## gi|225351897|ref|ZP_03742920.1| hypothetical protein BIFPSEUDO_03501 - Prom 104902 - 104961 6.1 + Prom 104809 - 104868 7.7 96 49 Tu 1 . + CDS 104935 - 105189 197 ## - Term 105092 - 105125 0.3 97 50 Op 1 . - CDS 105353 - 106093 523 ## COG0480 Translation elongation factors (GTPases) 98 50 Op 2 . - CDS 106033 - 107136 282 ## COG0480 Translation elongation factors (GTPases) + Prom 107054 - 107113 1.9 99 51 Tu 1 . + CDS 107343 - 107495 72 ## + Term 107637 - 107676 1.1 - Term 107615 - 107653 6.4 100 52 Tu 1 . - CDS 107665 - 109008 576 ## ELI_1139 plasmid recombination enzyme - Prom 109091 - 109150 2.2 101 53 Tu 1 . - CDS 109463 - 110182 208 ## Ethha_1796 hypothetical protein - Term 110568 - 110597 0.0 102 54 Op 1 . - CDS 110626 - 110946 317 ## EUBELI_01776 hypothetical protein 103 54 Op 2 . - CDS 110949 - 112025 936 ## COG0582 Integrase 104 54 Op 3 . - CDS 112029 - 112229 184 ## gi|225351904|ref|ZP_03742927.1| hypothetical protein BIFPSEUDO_03508 - Prom 112269 - 112328 3.3 105 55 Tu 1 . - CDS 112330 - 112440 72 ## + Prom 112275 - 112334 8.8 106 56 Op 1 . + CDS 112421 - 112954 222 ## Balac_0969 hypothetical protein + Term 112962 - 113005 6.2 107 56 Op 2 . + CDS 113007 - 113213 162 ## - Term 112940 - 113002 18.0 108 57 Tu 1 . - CDS 113150 - 114712 2192 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Prom 114915 - 114974 2.3 109 58 Tu 1 . + CDS 115169 - 117646 3495 ## COG3957 Phosphoketolase + Term 117676 - 117721 14.6 + Prom 117730 - 117789 1.9 110 59 Op 1 21/0.000 + CDS 117844 - 119514 1855 ## COG0280 Phosphotransacetylase 111 59 Op 2 . + CDS 119603 - 120832 1715 ## COG0282 Acetate kinase + Term 120878 - 120943 18.1 + Prom 120903 - 120962 3.1 112 60 Tu 1 . + CDS 121120 - 122946 1225 ## COG1835 Predicted acyltransferases + Term 122990 - 123047 21.2 - Term 122980 - 123032 17.8 113 61 Op 1 7/0.000 - CDS 123057 - 124448 358 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 114 61 Op 2 . - CDS 124506 - 125087 716 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 125119 - 125178 2.2 + Prom 125102 - 125161 1.6 115 62 Tu 1 . + CDS 125278 - 127935 1885 ## COG0210 Superfamily I DNA and RNA helicases + Prom 127971 - 128030 5.2 116 63 Op 1 . + CDS 128056 - 128454 544 ## BDP_1013 hypothetical protein 117 63 Op 2 36/0.000 + CDS 128461 - 129675 1301 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 118 63 Op 3 . + CDS 129675 - 130511 244 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 119 64 Tu 1 . + CDS 130790 - 131416 1028 ## PROTEIN SUPPORTED gi|119025715|ref|YP_909560.1| 30S ribosomal protein S4 + Term 131467 - 131505 8.5 - Term 131447 - 131502 16.4 120 65 Tu 1 . - CDS 131544 - 131813 211 ## BDP_1017 hypothetical protein - Prom 131848 - 131907 2.5 + Prom 131518 - 131577 3.0 121 66 Op 1 . + CDS 131740 - 131886 160 ## 122 66 Op 2 . + CDS 131964 - 132638 750 ## COG0406 Fructose-2,6-bisphosphatase + Prom 132648 - 132707 1.8 123 67 Op 1 . + CDS 132734 - 133117 559 ## BAD_0699 secreted protein 124 67 Op 2 . + CDS 133117 - 133353 277 ## BDP_1020 hypothetical protein 125 67 Op 3 9/0.000 + CDS 133443 - 136121 3296 ## COG0013 Alanyl-tRNA synthetase 126 67 Op 4 4/0.000 + CDS 136132 - 136605 258 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 127 67 Op 5 . + CDS 136602 - 137786 1206 ## COG1559 Predicted periplasmic solute-binding protein + Term 137813 - 137864 6.1 - Term 137583 - 137623 -0.0 128 68 Tu 1 . - CDS 137789 - 138259 407 ## BDP_1024 hypothetical protein + Prom 138090 - 138149 2.3 129 69 Op 1 7/0.000 + CDS 138307 - 139500 1301 ## COG0082 Chorismate synthase 130 69 Op 2 5/0.000 + CDS 139508 - 141136 1583 ## COG0337 3-dehydroquinate synthetase 131 69 Op 3 . + CDS 141157 - 141606 675 ## COG0757 3-dehydroquinate dehydratase II + Term 141654 - 141690 6.3 + Prom 141755 - 141814 2.1 132 70 Tu 1 . + CDS 142013 - 147271 6672 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Term 147317 - 147360 13.0 + Prom 147287 - 147346 2.4 133 71 Op 1 . + CDS 147404 - 149065 1930 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 149110 - 149149 4.0 + Prom 149118 - 149177 1.9 134 71 Op 2 . + CDS 149227 - 150894 1264 ## Balac_0920 hypothetical protein + Term 150924 - 150964 7.3 + Prom 150962 - 151021 3.3 135 72 Op 1 12/0.000 + CDS 151075 - 152571 1616 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 136 72 Op 2 41/0.000 + CDS 152577 - 153800 1036 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 137 72 Op 3 4/0.000 + CDS 153819 - 154598 1222 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 138 72 Op 4 19/0.000 + CDS 154595 - 155869 1241 ## COG0520 Selenocysteine lyase 139 72 Op 5 4/0.000 + CDS 155875 - 156426 663 ## COG0822 NifU homolog involved in Fe-S cluster formation 140 72 Op 6 . + CDS 156570 - 157157 575 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme + Term 157200 - 157247 9.3 - Term 157279 - 157341 16.2 141 73 Op 1 . - CDS 157354 - 158598 1535 ## COG0448 ADP-glucose pyrophosphorylase 142 73 Op 2 . - CDS 158746 - 159612 576 ## COG0566 rRNA methylases - TRNA 159677 - 159766 66.5 # Leu GAG 0 0 - Term 159708 - 159743 2.1 143 74 Tu 1 . - CDS 159746 - 159922 114 ## 144 75 Op 1 . + CDS 159887 - 160684 811 ## COG1385 Uncharacterized protein conserved in bacteria 145 75 Op 2 . + CDS 160769 - 161104 439 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 146 75 Op 3 17/0.000 + CDS 161144 - 162283 726 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 147 75 Op 4 13/0.000 + CDS 162280 - 162825 526 ## COG0319 Predicted metal-dependent hydrolase 148 75 Op 5 1/0.042 + CDS 162887 - 164296 1237 ## COG1253 Hemolysins and related proteins containing CBS domains 149 75 Op 6 . + CDS 164392 - 165288 907 ## COG1159 GTPase + Term 165334 - 165366 5.6 - Term 165428 - 165477 10.9 150 76 Tu 1 . - CDS 165492 - 167528 2462 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 167560 - 167619 3.3 + Prom 167659 - 167718 3.0 151 77 Op 1 10/0.000 + CDS 167765 - 168910 1520 ## COG3288 NAD/NADP transhydrogenase alpha subunit 152 77 Op 2 17/0.000 + CDS 168914 - 169219 467 ## COG3288 NAD/NADP transhydrogenase alpha subunit 153 77 Op 3 . + CDS 169220 - 170665 1927 ## COG1282 NAD/NADP transhydrogenase beta subunit 154 77 Op 4 . + CDS 170735 - 170869 103 ## gi|212716031|ref|ZP_03324159.1| hypothetical protein BIFCAT_00943 155 77 Op 5 . + CDS 170911 - 172278 1077 ## BAD_0727 putative riboflavin-specific deaminase + Term 172438 - 172481 5.2 156 78 Tu 1 . - CDS 172348 - 172599 197 ## gi|225351957|ref|ZP_03742980.1| hypothetical protein BIFPSEUDO_03562 157 79 Tu 1 . + CDS 172729 - 172995 117 ## BDP_1055 MATE efflux family protein 158 80 Op 1 11/0.000 - CDS 172933 - 174216 715 ## COG0477 Permeases of the major facilitator superfamily 159 80 Op 2 . - CDS 174291 - 174947 622 ## COG1309 Transcriptional regulator - Prom 174978 - 175037 4.5 + Prom 175316 - 175375 6.4 160 81 Op 1 11/0.000 + CDS 175446 - 175679 164 ## COG0695 Glutaredoxin and related proteins 161 81 Op 2 18/0.000 + CDS 175766 - 176110 259 ## COG1780 Protein involved in ribonucleotide reduction 162 81 Op 3 . + CDS 176113 - 178296 1572 ## COG0209 Ribonucleotide reductase, alpha subunit 163 81 Op 4 . + CDS 178327 - 178467 101 ## 164 81 Op 5 . + CDS 178433 - 179425 1045 ## COG0208 Ribonucleotide reductase, beta subunit + Term 179508 - 179551 0.1 165 82 Tu 1 . - CDS 179491 - 182007 1353 ## COG0178 Excinuclease ATPase subunit - Prom 182201 - 182260 4.0 166 83 Tu 1 . + CDS 181995 - 182156 154 ## gi|225351967|ref|ZP_03742990.1| hypothetical protein BIFPSEUDO_03572 - Term 182281 - 182313 1.5 167 84 Op 1 . - CDS 182372 - 182602 258 ## BBPR_0041 permease MFS superfamily 168 84 Op 2 . - CDS 182616 - 182795 273 ## BLJ_0028 major facilitator superfamily protein 169 85 Tu 1 . - CDS 183185 - 184180 715 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 184375 - 184434 2.4 + Prom 184252 - 184311 3.2 170 86 Tu 1 . + CDS 184466 - 185062 917 ## PROTEIN SUPPORTED gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25 + Term 185131 - 185168 8.1 - Term 185109 - 185167 15.8 171 87 Tu 1 . - CDS 185411 - 185602 148 ## 172 88 Op 1 11/0.000 + CDS 185525 - 186034 391 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 173 88 Op 2 . + CDS 186031 - 186399 223 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 174 88 Op 3 . + CDS 186485 - 186898 508 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 186930 - 186960 3.0 - Term 186802 - 186838 2.2 175 89 Tu 1 . - CDS 186842 - 187096 166 ## - Prom 187243 - 187302 2.6 + Prom 187295 - 187354 1.9 176 90 Op 1 . + CDS 187459 - 188586 1804 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Prom 188666 - 188725 2.6 177 90 Op 2 . + CDS 188777 - 189526 681 ## COG2860 Predicted membrane protein + Term 189574 - 189609 6.1 - Term 189544 - 189609 10.7 178 91 Op 1 . - CDS 189624 - 189884 400 ## PROTEIN SUPPORTED gi|119025763|ref|YP_909608.1| 30S ribosomal protein S20 179 91 Op 2 . - CDS 189906 - 190112 91 ## gi|225351982|ref|ZP_03743005.1| hypothetical protein BIFPSEUDO_03587 - Prom 190275 - 190334 2.4 + Prom 189955 - 190014 3.0 180 92 Op 1 4/0.000 + CDS 190041 - 191921 2593 ## COG0481 Membrane GTPase LepA 181 92 Op 2 . + CDS 191921 - 193126 974 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Term 193189 - 193236 5.5 182 93 Op 1 . - CDS 193280 - 194077 759 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 183 93 Op 2 . - CDS 194094 - 195593 1127 ## BAD_0934 acyl-CoA reductase 184 93 Op 3 . - CDS 195590 - 196714 1192 ## BAD_0933 acyl protein synthase 185 93 Op 4 . - CDS 196760 - 198193 1707 ## COG2233 Xanthine/uracil permeases - Prom 198420 - 198479 5.2 + Prom 198383 - 198442 2.4 186 94 Op 1 21/0.000 + CDS 198492 - 203063 5803 ## COG0069 Glutamate synthase domain 2 187 94 Op 2 . + CDS 203065 - 204612 1870 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 204640 - 204685 7.2 + Prom 204657 - 204716 2.5 188 95 Op 1 . + CDS 204811 - 205272 462 ## BDP_1080 hypothetical protein 189 95 Op 2 . + CDS 205309 - 205512 118 ## 190 95 Op 3 . + CDS 205509 - 206765 1646 ## COG0438 Glycosyltransferase + Term 206795 - 206842 7.3 191 96 Tu 1 . + CDS 206871 - 207722 1027 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 192 97 Op 1 . + CDS 207834 - 208889 1042 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases 193 97 Op 2 . + CDS 208981 - 209538 615 ## COG2062 Phosphohistidine phosphatase SixA + Prom 209548 - 209607 3.2 194 98 Op 1 9/0.000 + CDS 209700 - 212006 2998 ## COG0620 Methionine synthase II (cobalamin-independent) 195 98 Op 2 . + CDS 212036 - 212875 971 ## COG0685 5,10-methylenetetrahydrofolate reductase + Term 212898 - 212944 14.1 196 99 Tu 1 . + CDS 212969 - 216028 2380 ## COG1391 Glutamine synthetase adenylyltransferase + Term 216098 - 216140 4.9 197 100 Op 1 19/0.000 + CDS 216272 - 217285 1086 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 198 100 Op 2 . + CDS 217285 - 217710 622 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 199 100 Op 3 . + CDS 217714 - 219135 1197 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 200 100 Op 4 1/0.042 + CDS 219135 - 220097 1024 ## COG0284 Orotidine-5'-phosphate decarboxylase 201 100 Op 5 13/0.000 + CDS 220173 - 220991 951 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 202 100 Op 6 1/0.042 + CDS 220993 - 221943 1307 ## COG0167 Dihydroorotate dehydrogenase 203 100 Op 7 . + CDS 221972 - 222667 1067 ## COG0461 Orotate phosphoribosyltransferase + Term 222705 - 222753 4.6 - Term 222687 - 222747 20.5 204 101 Op 1 . - CDS 222784 - 223707 1197 ## COG0583 Transcriptional regulator 205 101 Op 2 . - CDS 223790 - 223963 84 ## gi|225352007|ref|ZP_03743030.1| hypothetical protein BIFPSEUDO_03612 - Term 223964 - 224010 7.6 206 101 Op 3 . - CDS 224038 - 226677 2686 ## COG0422 Thiamine biosynthesis protein ThiC + Prom 226690 - 226749 3.0 207 102 Op 1 . + CDS 226792 - 227130 230 ## 208 102 Op 2 . + CDS 227176 - 227721 394 ## PROTEIN SUPPORTED gi|116492196|ref|YP_803931.1| acetyltransferase + Term 227755 - 227805 4.9 209 103 Tu 1 . - CDS 227795 - 228145 264 ## COG0394 Protein-tyrosine-phosphatase - Prom 228209 - 228268 3.1 - Term 228250 - 228307 19.4 210 104 Tu 1 . - CDS 228315 - 229436 1473 ## COG0620 Methionine synthase II (cobalamin-independent) 211 105 Tu 1 . + CDS 229717 - 230370 715 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 230476 - 230524 10.2 + Prom 230492 - 230551 1.8 212 106 Op 1 2/0.021 + CDS 230661 - 230963 393 ## COG0640 Predicted transcriptional regulators 213 106 Op 2 . + CDS 230975 - 231745 928 ## COG5658 Predicted integral membrane protein + Term 231908 - 231951 6.2 - Term 231894 - 231939 8.8 214 107 Op 1 . - CDS 231971 - 232606 801 ## COG1011 Predicted hydrolase (HAD superfamily) 215 107 Op 2 . - CDS 232699 - 234474 1409 ## COG0063 Predicted sugar kinase 216 108 Tu 1 . + CDS 234556 - 235269 244 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 235386 - 235454 30.4 + TRNA 235368 - 235440 81.0 # Asn GTT 0 0 + TRNA 235498 - 235573 89.3 # Asn GTT 0 0 - Term 235568 - 235599 2.1 217 109 Tu 1 . - CDS 235606 - 236031 357 ## BDP_1211 hypothetical protein 218 110 Op 1 . + CDS 236391 - 236756 165 ## BAD_0773 hypothetical protein + Prom 236782 - 236841 2.5 219 110 Op 2 . + CDS 236871 - 238682 1919 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 238722 - 238783 16.1 - Term 238715 - 238763 14.1 220 111 Op 1 . - CDS 238823 - 240355 1745 ## BAD_0775 hypothetical protein - Prom 240375 - 240434 2.1 - Term 240416 - 240464 10.1 221 111 Op 2 . - CDS 240511 - 241731 1809 ## COG0538 Isocitrate dehydrogenases - Prom 241766 - 241825 2.9 + Prom 241728 - 241787 2.4 222 112 Tu 1 . + CDS 241878 - 242996 1485 ## COG0516 IMP dehydrogenase/GMP reductase + Term 243033 - 243073 8.1 + Prom 243021 - 243080 2.4 223 113 Tu 1 . + CDS 243145 - 243735 566 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) - Term 243597 - 243650 1.6 224 114 Op 1 . - CDS 243804 - 244109 153 ## Blon_2467 sodium:dicarboxylate symporter 225 114 Op 2 . - CDS 244003 - 244440 317 ## Blon_2467 sodium:dicarboxylate symporter + Prom 244624 - 244683 3.6 226 115 Op 1 . + CDS 244739 - 246121 1757 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 227 115 Op 2 6/0.000 + CDS 246109 - 246531 634 ## COG0799 Uncharacterized homolog of plant Iojap protein + Term 246542 - 246584 9.1 + Prom 246554 - 246613 3.3 228 116 Op 1 . + CDS 246640 - 247371 744 ## COG0406 Fructose-2,6-bisphosphatase 229 116 Op 2 . + CDS 247485 - 248615 824 ## BAD_0868 hypothetical protein + Term 248860 - 248899 8.9 + TRNA 248779 - 248854 81.2 # Ala GGC 0 0 + Prom 249110 - 249169 7.9 230 117 Tu 1 . + CDS 249203 - 250465 696 ## COG3177 Uncharacterized conserved protein 231 118 Tu 1 . - CDS 250507 - 250758 133 ## gi|225352034|ref|ZP_03743057.1| hypothetical protein BIFPSEUDO_03642 - Prom 250905 - 250964 1.7 + Prom 250739 - 250798 3.0 232 119 Tu 1 . + CDS 250956 - 251360 586 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase + Term 251400 - 251449 12.6 233 120 Op 1 . + CDS 251677 - 253353 1825 ## BDP_1224 cell surface protein 234 120 Op 2 . + CDS 253378 - 254370 158 ## COG3764 Sortase (surface protein transpeptidase) 235 120 Op 3 . + CDS 254243 - 255091 744 ## COG0406 Fructose-2,6-bisphosphatase 236 121 Op 1 . + CDS 255342 - 256283 1147 ## COG0598 Mg2+ and Co2+ transporters 237 121 Op 2 . + CDS 256304 - 257170 911 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 238 122 Tu 1 . - CDS 257107 - 257259 102 ## 239 123 Tu 1 . + CDS 257265 - 260237 4392 ## COG0495 Leucyl-tRNA synthetase 240 124 Op 1 7/0.000 + CDS 260412 - 261203 483 ## COG1555 DNA uptake protein and related DNA-binding proteins 241 124 Op 2 10/0.000 + CDS 261200 - 262951 1200 ## COG0658 Predicted membrane metal-binding protein 242 124 Op 3 . + CDS 262985 - 263962 768 ## COG1466 DNA polymerase III, delta subunit 243 124 Op 4 . + CDS 263964 - 264335 348 ## COG0802 Predicted ATPase or kinase 244 124 Op 5 . + CDS 264295 - 264597 251 ## BLJ_1132 hypothetical protein 245 124 Op 6 20/0.000 + CDS 264672 - 265481 806 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 246 124 Op 7 9/0.000 + CDS 265491 - 266066 247 ## PROTEIN SUPPORTED gi|227982014|ref|ZP_04029271.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 247 124 Op 8 . + CDS 266115 - 267158 1190 ## COG0533 Metal-dependent proteases with possible chaperone activity + Term 267216 - 267261 -0.3 + TRNA 267276 - 267351 89.3 # Asn GTT 0 0 248 125 Tu 1 . + CDS 267635 - 268585 1132 ## COG3049 Penicillin V acylase and related amidases + Term 268645 - 268688 12.2 - Term 268632 - 268674 8.2 249 126 Tu 1 . - CDS 268746 - 269435 751 ## COG4721 Predicted membrane protein - Prom 269542 - 269601 3.7 + Prom 269824 - 269883 2.2 250 127 Op 1 . + CDS 269927 - 270391 500 ## BDP_1107 MerR family transcriptional regulator 251 127 Op 2 . + CDS 270450 - 271496 1500 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 252 127 Op 3 . + CDS 271572 - 272315 836 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 272349 - 272401 14.2 - Term 272337 - 272388 5.1 253 128 Op 1 . - CDS 272428 - 273558 1705 ## COG0620 Methionine synthase II (cobalamin-independent) 254 128 Op 2 . - CDS 273593 - 273787 134 ## + Prom 273612 - 273671 2.2 255 129 Op 1 . + CDS 273706 - 274158 566 ## BLLJ_0519 hypothetical protein + Prom 274160 - 274219 2.3 256 129 Op 2 . + CDS 274255 - 275283 1043 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 275344 - 275399 20.0 - Term 275139 - 275194 -0.6 257 130 Tu 1 . - CDS 275341 - 275523 154 ## gi|225352063|ref|ZP_03743086.1| hypothetical protein BIFPSEUDO_03672 - Prom 275573 - 275632 2.8 + Prom 275491 - 275550 2.2 258 131 Tu 1 . + CDS 275769 - 276476 852 ## gi|225352064|ref|ZP_03743087.1| hypothetical protein BIFPSEUDO_03673 + Term 276508 - 276548 10.1 259 132 Tu 1 . + CDS 276581 - 277480 787 ## BLD_0377 hypothetical protein + Term 277503 - 277533 3.0 260 133 Tu 1 . + CDS 277732 - 278652 977 ## BL1489 hypothetical protein + Term 278669 - 278699 2.9 261 134 Op 1 . + CDS 278798 - 279574 678 ## COG1694 Predicted pyrophosphatase 262 134 Op 2 . + CDS 279567 - 280985 1253 ## COG3579 Aminopeptidase C + Term 281043 - 281091 12.8 - Term 281030 - 281079 9.2 263 135 Tu 1 . - CDS 281110 - 282063 1111 ## COG0517 FOG: CBS domain - Term 282372 - 282406 1.4 264 136 Tu 1 . - CDS 282413 - 284014 188 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 284107 - 284166 4.1 + Prom 284035 - 284094 1.6 265 137 Op 1 . + CDS 284241 - 284846 575 ## COG1335 Amidases related to nicotinamidase 266 137 Op 2 . + CDS 284870 - 285247 347 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + TRNA 285563 - 285638 84.4 # Gly GCC 0 0 + Prom 285565 - 285624 79.1 267 138 Op 1 . + CDS 285869 - 285988 148 ## 268 138 Op 2 . + CDS 286000 - 287649 1295 ## BAD_0844 hypothetical protein 269 138 Op 3 . + CDS 287652 - 288434 913 ## BAD_0843 hypothetical protein 270 138 Op 4 3/0.000 + CDS 288434 - 291985 1186 ## COG4913 Uncharacterized protein conserved in bacteria 271 138 Op 5 . + CDS 291897 - 293099 714 ## COG4924 Uncharacterized protein conserved in bacteria 272 138 Op 6 1/0.042 + CDS 293179 - 296166 3243 ## COG0178 Excinuclease ATPase subunit 273 138 Op 7 . + CDS 296163 - 298466 1448 ## COG0322 Nuclease subunit of the excinuclease complex 274 138 Op 8 . + CDS 298533 - 299477 806 ## COG0169 Shikimate 5-dehydrogenase 275 138 Op 9 . + CDS 299477 - 300409 812 ## COG1660 Predicted P-loop-containing kinase 276 139 Tu 1 . + CDS 300559 - 301509 1188 ## COG1481 Uncharacterized protein conserved in bacteria + Term 301522 - 301575 8.1 + Prom 301531 - 301590 3.4 277 140 Op 1 13/0.000 + CDS 301639 - 302844 1710 ## COG0126 3-phosphoglycerate kinase + Term 302863 - 302916 13.1 278 140 Op 2 9/0.000 + CDS 302973 - 303767 613 ## COG0149 Triosephosphate isomerase + Prom 303778 - 303837 1.9 279 140 Op 3 . + CDS 303883 - 304140 338 ## COG1314 Preprotein translocase subunit SecG + Term 304150 - 304203 18.1 280 141 Tu 1 . + CDS 304275 - 305087 678 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 305117 - 305176 3.9 281 142 Tu 1 . + CDS 305256 - 306791 1404 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Term 306521 - 306559 -1.0 282 143 Tu 1 . - CDS 306727 - 306930 87 ## 283 144 Op 1 . + CDS 306896 - 307117 304 ## gi|225352090|ref|ZP_03743113.1| hypothetical protein BIFPSEUDO_03700 284 144 Op 2 1/0.042 + CDS 307135 - 307752 579 ## COG3201 Nicotinamide mononucleotide transporter 285 144 Op 3 . + CDS 307791 - 308018 131 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism 286 144 Op 4 . + CDS 307990 - 308112 82 ## gi|225352093|ref|ZP_03743116.1| hypothetical protein BIFPSEUDO_03703 287 144 Op 5 . + CDS 308102 - 308362 137 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism + Term 308518 - 308553 5.2 - Term 308369 - 308417 15.5 288 145 Op 1 . - CDS 308452 - 309555 1684 ## COG0176 Transaldolase 289 145 Op 2 . - CDS 309548 - 309628 76 ## 290 145 Op 3 . - CDS 309648 - 311756 2913 ## COG0021 Transketolase + Prom 311949 - 312008 2.1 291 146 Op 1 3/0.000 + CDS 312149 - 313282 978 ## COG1420 Transcriptional regulator of heat shock gene 292 146 Op 2 . + CDS 313336 - 314484 1231 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 314541 - 314587 13.1 - Term 314529 - 314574 13.7 293 147 Tu 1 . - CDS 314651 - 315442 716 ## COG3001 Fructosamine-3-kinase - Prom 315564 - 315623 3.5 294 148 Tu 1 . + CDS 315642 - 316526 1244 ## COG1968 Uncharacterized bacitracin resistance protein + Term 316556 - 316601 15.1 - Term 316544 - 316589 11.3 295 149 Tu 1 . - CDS 316622 - 317446 721 ## BAD_0824 hypothetical protein + TRNA 317699 - 317774 76.7 # Gly GCC 0 0 + TRNA 317802 - 317872 54.7 # Cys GCA 0 0 + TRNA 317912 - 317983 74.3 # Val GAC 0 0 + TRNA 318016 - 318091 87.7 # Val CAC 0 0 + Prom 318017 - 318076 78.0 296 150 Op 1 . + CDS 318175 - 318384 241 ## gi|225352102|ref|ZP_03743125.1| hypothetical protein BIFPSEUDO_03716 297 150 Op 2 . + CDS 318452 - 318625 187 ## gi|225352103|ref|ZP_03743126.1| hypothetical protein BIFPSEUDO_03717 298 151 Op 1 . + CDS 318733 - 318897 168 ## gi|225352104|ref|ZP_03743127.1| hypothetical protein BIFPSEUDO_03718 299 151 Op 2 . + CDS 318968 - 319195 184 ## BDP_1154 hypothetical protein + Term 319228 - 319257 0.4 300 151 Op 3 4/0.000 + CDS 319269 - 319718 400 ## COG1716 FOG: FHA domain + Term 319757 - 319801 13.4 301 152 Tu 1 . + CDS 319817 - 320440 414 ## COG0789 Predicted transcriptional regulators 302 153 Tu 1 . - CDS 320413 - 320604 117 ## - Prom 320731 - 320790 1.7 303 154 Tu 1 . + CDS 320546 - 320914 360 ## BDP_1157 hypothetical protein - Term 321057 - 321106 2.1 304 155 Tu 1 . - CDS 321267 - 321989 871 ## COG0546 Predicted phosphatases - Prom 322039 - 322098 4.2 - Term 322036 - 322072 6.3 305 156 Op 1 . - CDS 322101 - 322448 387 ## BDP_1159 hypothetical protein 306 156 Op 2 . - CDS 322544 - 325144 1812 ## COG4581 Superfamily II RNA helicase 307 156 Op 3 . - CDS 325165 - 325482 151 ## BDP_1161 hypothetical protein 308 156 Op 4 . - CDS 325496 - 327406 1828 ## BAD_0817 hypothetical protein - Prom 327469 - 327528 2.2 309 157 Op 1 . - CDS 327553 - 327897 257 ## BAD_0816 UTP-glucose-1-phosphate uridylyltransferase 310 157 Op 2 . - CDS 327902 - 328933 1036 ## COG4284 UDP-glucose pyrophosphorylase 311 158 Tu 1 . + CDS 328679 - 329161 160 ## + Term 329187 - 329215 -1.0 + TRNA 329206 - 329282 87.1 # Pro GGG 0 0 + Prom 329207 - 329266 79.3 312 159 Tu 1 . + CDS 329371 - 329775 274 ## BDP_1164 hypothetical protein + Term 329824 - 329890 17.1 - Term 329812 - 329873 24.2 313 160 Op 1 . - CDS 329879 - 332008 1798 ## COG1160 Predicted GTPases 314 160 Op 2 . - CDS 332005 - 332778 829 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 332816 - 332875 2.6 + Prom 332775 - 332834 2.0 315 161 Tu 1 . + CDS 332889 - 333827 963 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 333885 - 333927 9.0 316 162 Tu 1 . - CDS 333744 - 334025 292 ## BLD_0460 hypothetical protein - Prom 334061 - 334120 2.7 - Term 334112 - 334139 -0.8 317 163 Op 1 . - CDS 334147 - 335775 1747 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 318 163 Op 2 . - CDS 335723 - 337108 589 ## BAD_0810 hypothetical protein 319 163 Op 3 39/0.000 - CDS 337145 - 338032 1073 ## COG0074 Succinyl-CoA synthetase, alpha subunit 320 163 Op 4 . - CDS 338034 - 339227 1253 ## COG0045 Succinyl-CoA synthetase, beta subunit 321 163 Op 5 . - CDS 339278 - 339859 480 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 339892 - 339951 3.2 - Term 339913 - 339959 13.2 322 164 Op 1 . - CDS 339976 - 340368 541 ## BAD_0806 hypothetical protein 323 164 Op 2 29/0.000 - CDS 340434 - 341507 1110 ## COG2255 Holliday junction resolvasome, helicase subunit 324 164 Op 3 14/0.000 - CDS 341519 - 342136 557 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 325 164 Op 4 8/0.000 - CDS 342181 - 342765 481 ## COG0817 Holliday junction resolvasome, endonuclease subunit 326 164 Op 5 . - CDS 342772 - 343527 890 ## COG0217 Uncharacterized conserved protein - Term 343577 - 343619 10.2 327 165 Tu 1 . - CDS 343643 - 344305 606 ## COG0558 Phosphatidylglycerophosphate synthase - Term 344320 - 344372 13.2 328 166 Op 1 . - CDS 344414 - 346564 2729 ## COG0441 Threonyl-tRNA synthetase 329 166 Op 2 5/0.000 - CDS 346604 - 347431 608 ## COG3879 Uncharacterized protein conserved in bacteria 330 166 Op 3 5/0.000 - CDS 347438 - 347770 375 ## COG3856 Uncharacterized conserved protein (small basic protein) 331 166 Op 4 2/0.021 - CDS 347770 - 348741 543 ## COG3879 Uncharacterized protein conserved in bacteria 332 166 Op 5 . - CDS 348747 - 349349 616 ## COG0558 Phosphatidylglycerophosphate synthase 333 166 Op 6 3/0.000 - CDS 349363 - 350214 798 ## COG0040 ATP phosphoribosyltransferase - Term 350219 - 350252 1.9 334 166 Op 7 . - CDS 350260 - 350523 483 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 335 166 Op 8 . - CDS 350556 - 350936 497 ## COG0036 Pentose-5-phosphate-3-epimerase 336 166 Op 9 . - CDS 350779 - 351222 150 ## COG0036 Pentose-5-phosphate-3-epimerase 337 166 Op 10 3/0.000 - CDS 351257 - 352270 1086 ## COG0682 Prolipoprotein diacylglyceryltransferase 338 166 Op 11 37/0.000 - CDS 352335 - 353216 369 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 339 166 Op 12 . - CDS 353234 - 355327 1854 ## COG0133 Tryptophan synthase beta chain 340 166 Op 13 . - CDS 355373 - 356929 1338 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 341 166 Op 14 24/0.000 - CDS 356926 - 357333 378 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 342 166 Op 15 . - CDS 357402 - 358172 818 ## COG0107 Imidazoleglycerol-phosphate synthase 343 167 Tu 1 . + CDS 358171 - 358308 66 ## 344 168 Op 1 2/0.021 - CDS 358292 - 359473 955 ## COG0820 Predicted Fe-S-cluster redox enzyme 345 168 Op 2 7/0.000 - CDS 359491 - 360477 839 ## COG0575 CDP-diglyceride synthetase 346 168 Op 3 33/0.000 - CDS 360529 - 361083 885 ## COG0233 Ribosome recycling factor 347 168 Op 4 . - CDS 361134 - 361883 850 ## COG0528 Uridylate kinase 348 168 Op 5 . - CDS 361880 - 362023 86 ## gi|225352150|ref|ZP_03743173.1| hypothetical protein BIFPSEUDO_03765 349 168 Op 6 38/0.000 - CDS 362069 - 362920 417 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 362931 - 362970 -0.9 350 168 Op 7 . - CDS 362996 - 363820 1317 ## PROTEIN SUPPORTED gi|154487370|ref|ZP_02028777.1| hypothetical protein BIFADO_01220 - Prom 364004 - 364063 1.7 - Term 364006 - 364053 15.0 351 169 Op 1 . - CDS 364082 - 364567 553 ## COG0242 N-formylmethionyl-tRNA deformylase 352 169 Op 2 . - CDS 364570 - 366615 1741 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Term 366647 - 366694 9.4 353 170 Tu 1 . - CDS 366719 - 367372 372 ## BAD_0778 hypothetical protein - TRNA 367793 - 367866 49.5 # Gln TTG 0 0 - Term 368029 - 368068 0.0 354 171 Op 1 . - CDS 368079 - 369152 938 ## COG0462 Phosphoribosylpyrophosphate synthetase 355 171 Op 2 . - CDS 369192 - 369938 657 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 356 171 Op 3 . - CDS 369935 - 370516 649 ## BDP_1262 hypothetical protein 357 171 Op 4 . - CDS 370513 - 371826 1332 ## COG0014 Gamma-glutamyl phosphate reductase 358 172 Tu 1 . - CDS 371980 - 373287 1704 ## COG0112 Glycine/serine hydroxymethyltransferase - Prom 373344 - 373403 2.6 359 173 Tu 1 . + CDS 373549 - 375036 2050 ## COG0498 Threonine synthase + Term 375085 - 375125 11.1 360 174 Tu 1 . + CDS 375158 - 376462 1243 ## COG0477 Permeases of the major facilitator superfamily 361 175 Op 1 . - CDS 376429 - 376602 66 ## 362 175 Op 2 . - CDS 376662 - 377234 649 ## BLLJ_0705 hypothetical protein 363 176 Op 1 . - CDS 377423 - 378307 583 ## COG3177 Uncharacterized conserved protein 364 176 Op 2 . - CDS 378363 - 379082 592 ## BDP_1738 hypothetical protein - Prom 379116 - 379175 2.6 + Prom 379048 - 379107 3.4 365 177 Tu 1 . + CDS 379309 - 380193 183 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 380216 - 380261 9.6 - Term 380204 - 380249 9.6 366 178 Op 1 . - CDS 380281 - 381195 884 ## gi|225352169|ref|ZP_03743192.1| hypothetical protein BIFPSEUDO_03785 367 178 Op 2 . - CDS 381304 - 381657 281 ## gi|225352170|ref|ZP_03743193.1| hypothetical protein BIFPSEUDO_03786 - Prom 381792 - 381851 2.2 + Prom 381507 - 381566 1.9 368 179 Tu 1 . + CDS 381593 - 381805 116 ## + Prom 382026 - 382085 2.1 369 180 Op 1 . + CDS 382177 - 382362 97 ## gi|225352171|ref|ZP_03743194.1| hypothetical protein BIFPSEUDO_03787 370 180 Op 2 . + CDS 382373 - 382858 644 ## COG1225 Peroxiredoxin 371 181 Tu 1 . - CDS 382944 - 383135 89 ## gi|225352174|ref|ZP_03743197.1| hypothetical protein BIFPSEUDO_03790 372 182 Tu 1 . + CDS 383106 - 383330 207 ## gi|154488621|ref|ZP_02029470.1| hypothetical protein BIFADO_01928 373 183 Tu 1 . - CDS 383285 - 383581 126 ## + Prom 383570 - 383629 2.1 374 184 Tu 1 . + CDS 383658 - 383936 325 ## BDP_1272 antibiotic resistance protein - Term 384006 - 384040 -0.2 375 185 Tu 1 . - CDS 384088 - 386007 1833 ## BLD_1202 hypothetical protein + Prom 385952 - 386011 2.0 376 186 Op 1 . + CDS 386180 - 386389 102 ## 377 186 Op 2 . + CDS 386452 - 386619 126 ## BAD_1279 IS3 family transposase 378 186 Op 3 . + CDS 386616 - 386861 195 ## BDP_2247 acetamidase/formamidase (EC:3.5.1.49) - Term 386714 - 386764 5.2 379 187 Tu 1 . - CDS 386991 - 387152 83 ## + Prom 387405 - 387464 3.7 380 188 Op 1 8/0.000 + CDS 387490 - 387867 428 ## COG1725 Predicted transcriptional regulators 381 188 Op 2 . + CDS 387864 - 388796 989 ## COG1131 ABC-type multidrug transport system, ATPase component 382 188 Op 3 . + CDS 388793 - 389509 702 ## gi|154488629|ref|ZP_02029478.1| hypothetical protein BIFADO_01936 383 189 Op 1 . - CDS 389605 - 390264 823 ## COG0637 Predicted phosphatase/phosphohexomutase 384 189 Op 2 17/0.000 - CDS 390297 - 392003 1705 ## COG0497 ATPase involved in DNA repair 385 189 Op 3 . - CDS 392012 - 392950 827 ## COG0061 Predicted sugar kinase - Prom 393185 - 393244 3.0 + Prom 393115 - 393174 2.2 386 190 Op 1 17/0.000 + CDS 393219 - 394682 1581 ## COG0168 Trk-type K+ transport systems, membrane components + Prom 394684 - 394743 3.5 387 190 Op 2 . + CDS 394770 - 395423 884 ## COG0569 K+ transport systems, NAD-binding component + Term 395439 - 395495 2.6 - Term 395336 - 395373 2.4 388 191 Op 1 . - CDS 395541 - 396302 721 ## COG1189 Predicted rRNA methylase 389 191 Op 2 . - CDS 396334 - 397368 1087 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 390 191 Op 3 . - CDS 397375 - 399138 2460 ## BAD_0913 hypothetical protein 391 191 Op 4 . - CDS 399223 - 400530 659 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 400651 - 400710 2.8 392 192 Tu 1 . + CDS 400701 - 402545 1496 ## COG4905 Predicted membrane protein + Term 402588 - 402629 10.2 - Term 402571 - 402622 8.2 393 193 Op 1 1/0.042 - CDS 402643 - 403446 736 ## COG4905 Predicted membrane protein 394 193 Op 2 . - CDS 403459 - 403896 245 ## COG1418 Predicted HD superfamily hydrolase 395 194 Op 1 16/0.000 - CDS 404001 - 405488 1979 ## COG0165 Argininosuccinate lyase - Prom 405519 - 405578 2.5 396 194 Op 2 4/0.000 - CDS 405599 - 406837 1680 ## COG0137 Argininosuccinate synthase - Prom 406864 - 406923 2.8 397 194 Op 3 4/0.000 - CDS 406933 - 407448 527 ## COG1438 Arginine repressor 398 194 Op 4 9/0.000 - CDS 407448 - 408416 1271 ## COG0078 Ornithine carbamoyltransferase 399 194 Op 5 1/0.042 - CDS 408465 - 409427 993 ## COG4992 Ornithine/acetylornithine aminotransferase 400 194 Op 6 13/0.000 - CDS 409189 - 409761 107 ## COG4992 Ornithine/acetylornithine aminotransferase 401 194 Op 7 10/0.000 - CDS 409751 - 410707 945 ## COG0548 Acetylglutamate kinase 402 194 Op 8 11/0.000 - CDS 410718 - 411890 1076 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 403 194 Op 9 . - CDS 411887 - 412981 803 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 413013 - 413072 2.9 404 195 Tu 1 . + CDS 412904 - 413095 81 ## 405 196 Op 1 . - CDS 413127 - 413849 758 ## BDP_1297 hypothetical protein 406 196 Op 2 40/0.000 - CDS 413880 - 416489 3361 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 407 196 Op 3 4/0.000 - CDS 416497 - 417564 1492 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 408 196 Op 4 . - CDS 417630 - 418502 635 ## COG0566 rRNA methylases 409 197 Tu 1 . + CDS 418534 - 418773 184 ## + Term 418858 - 418915 15.4 + Prom 418936 - 418995 4.7 410 198 Tu 1 . + CDS 419059 - 419601 685 ## COG1611 Predicted Rossmann fold nucleotide-binding protein 411 199 Tu 1 . + CDS 419753 - 419956 145 ## gi|225352214|ref|ZP_03743237.1| hypothetical protein BIFPSEUDO_03830 412 200 Tu 1 . - CDS 420193 - 420372 194 ## Ethha_1826 HNH endonuclease - Prom 420552 - 420611 3.3 + Prom 420557 - 420616 3.4 413 201 Tu 1 . + CDS 420723 - 421352 588 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 414 202 Tu 1 . + CDS 421848 - 422018 65 ## BLLJ_0892 hypothetical protein - Term 422048 - 422090 13.3 415 203 Tu 1 . - CDS 422169 - 423605 1805 ## COG0174 Glutamine synthetase + Prom 423572 - 423631 2.3 416 204 Tu 1 . + CDS 423700 - 423873 90 ## gi|225352221|ref|ZP_03743244.1| hypothetical protein BIFPSEUDO_03837 - Term 423878 - 423920 9.5 417 205 Tu 1 . - CDS 423954 - 424736 1072 ## BAD_0944 hypothetical protein - Prom 424773 - 424832 2.4 418 206 Tu 1 . + CDS 424684 - 424875 60 ## 419 207 Tu 1 . - CDS 424841 - 426322 629 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 426353 - 426412 1.6 - Term 426362 - 426395 3.5 420 208 Tu 1 . - CDS 426434 - 427036 697 ## BAD_0946 hypothetical protein - Prom 427131 - 427190 2.8 + Prom 427066 - 427125 2.3 421 209 Tu 1 . + CDS 427187 - 428554 1652 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Term 428573 - 428646 22.0 422 210 Op 1 . - CDS 428687 - 429238 427 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 423 210 Op 2 . - CDS 429198 - 429530 271 ## BAD_0948 cobalt ABC transporter permease 424 210 Op 3 4/0.000 - CDS 429532 - 431022 187 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 431067 - 431120 19.0 425 210 Op 4 . - CDS 431133 - 431747 857 ## COG4721 Predicted membrane protein - Prom 431875 - 431934 1.8 426 211 Op 1 . - CDS 432031 - 433152 1144 ## COG0489 ATPases involved in chromosome partitioning 427 211 Op 2 . - CDS 433246 - 435921 2302 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 428 212 Op 1 . - CDS 436047 - 436253 154 ## BDP_1331 hypothetical protein 429 212 Op 2 . - CDS 436162 - 439371 2408 ## BAD_0953 hypothetical protein 430 213 Tu 1 . + CDS 439480 - 441666 1276 ## BDP_1332 hypothetical protein 431 214 Tu 1 . - CDS 441690 - 441878 140 ## - Prom 441898 - 441957 2.0 + Prom 441669 - 441728 2.6 432 215 Tu 1 . + CDS 441805 - 443466 1642 ## BDP_1333 arylsulfate sulfotransferase + Term 443485 - 443548 24.4 433 216 Tu 1 . + CDS 443569 - 444378 949 ## COG1122 ABC-type cobalt transport system, ATPase component + Term 444469 - 444509 -0.4 434 217 Tu 1 . - CDS 444456 - 445619 1117 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Term 445688 - 445742 14.2 435 218 Op 1 . - CDS 445776 - 446543 1158 ## COG1940 Transcriptional regulator/sugar kinase 436 218 Op 2 . - CDS 446536 - 446739 88 ## - Term 446747 - 446779 1.4 437 218 Op 3 . - CDS 446786 - 447808 1250 ## COG1216 Predicted glycosyltransferases 438 218 Op 4 . - CDS 447849 - 448034 191 ## + Prom 447859 - 447918 3.8 439 219 Tu 1 . + CDS 448019 - 448786 1030 ## COG0819 Putative transcription activator + Term 448842 - 448892 10.4 440 220 Op 1 . - CDS 448912 - 449217 178 ## PROTEIN SUPPORTED gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 441 220 Op 2 . - CDS 449289 - 451658 1918 ## COG1122 ABC-type cobalt transport system, ATPase component - Term 451667 - 451713 11.2 442 220 Op 3 . - CDS 451752 - 452375 637 ## COG3601 Predicted membrane protein - Prom 452529 - 452588 5.1 443 221 Op 1 . - CDS 452752 - 456099 2901 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 444 221 Op 2 . - CDS 456059 - 456595 278 ## BAD_0963 helicase - Term 456621 - 456668 10.1 445 222 Op 1 . - CDS 456916 - 457641 713 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 446 222 Op 2 . - CDS 457697 - 458689 925 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 447 222 Op 3 . - CDS 458743 - 459222 429 ## COG1490 D-Tyr-tRNAtyr deacylase 448 222 Op 4 . - CDS 459240 - 459899 702 ## BAD_0969 hypothetical protein 449 223 Tu 1 . + CDS 459977 - 460108 145 ## gi|225352253|ref|ZP_03743276.1| hypothetical protein BIFPSEUDO_03869 - Term 460125 - 460176 9.3 450 224 Op 1 . - CDS 460177 - 460347 101 ## 451 224 Op 2 . - CDS 460371 - 460568 342 ## BBPR_0865 gp2 phage-like protein 452 225 Op 1 . - CDS 460672 - 461493 446 ## COG3410 Uncharacterized conserved protein 453 225 Op 2 . - CDS 461496 - 462401 468 ## BAD_0974 hypothetical protein + Prom 462762 - 462821 3.1 454 226 Tu 1 . + CDS 462869 - 463192 229 ## COG1694 Predicted pyrophosphatase 455 227 Tu 1 . - CDS 463792 - 463944 90 ## gi|313140122|ref|ZP_07802315.1| conserved hypothetical protein - Prom 464020 - 464079 1.6 456 228 Op 1 . - CDS 464084 - 464320 258 ## gi|225352261|ref|ZP_03743284.1| hypothetical protein BIFPSEUDO_03877 457 228 Op 2 . - CDS 464369 - 464707 60 ## gi|229817499|ref|ZP_04447781.1| hypothetical protein BIFANG_02762 458 228 Op 3 . - CDS 464569 - 465108 387 ## gi|225352263|ref|ZP_03743286.1| hypothetical protein BIFPSEUDO_03879 - Prom 465284 - 465343 4.7 + Prom 465254 - 465313 5.7 459 229 Tu 1 . + CDS 465333 - 465497 173 ## gi|225352264|ref|ZP_03743287.1| hypothetical protein BIFPSEUDO_03880 + Prom 466311 - 466370 2.5 460 230 Op 1 . + CDS 466491 - 467552 572 ## CDR20291_1797 putative conjugative transposon DNA recombination protein 461 230 Op 2 . + CDS 467561 - 467791 118 ## EUBELI_01788 DNA helicase II / ATP-dependent DNA helicase PcrA - Term 467580 - 467617 -0.7 462 231 Tu 1 . - CDS 467736 - 468203 101 ## - Prom 468232 - 468291 2.4 + Prom 468484 - 468543 2.4 463 232 Tu 1 . + CDS 468780 - 469301 81 ## + Prom 469372 - 469431 3.4 464 233 Tu 1 . + CDS 469493 - 469939 340 ## gi|225352269|ref|ZP_03743292.1| hypothetical protein BIFPSEUDO_03885 465 234 Op 1 . + CDS 470042 - 470734 638 ## ML5_4837 hypothetical protein 466 234 Op 2 . + CDS 470646 - 471401 682 ## COG4186 Predicted phosphoesterase or phosphohydrolase - Term 471132 - 471176 0.0 467 235 Tu 1 . - CDS 471343 - 471645 129 ## BAD_0967 hypothetical protein - Term 471762 - 471804 5.9 468 236 Tu 1 . - CDS 471827 - 472039 143 ## BDP_1058 hypothetical protein + Prom 471656 - 471715 1.7 469 237 Op 1 . + CDS 471962 - 472228 100 ## BDP_1056 aldo/keto reductase (EC:1.1.1.188) 470 237 Op 2 . + CDS 472164 - 472361 189 ## - Term 472333 - 472372 -0.2 471 238 Op 1 . - CDS 472571 - 473533 481 ## Blon_0500 hypothetical protein 472 238 Op 2 . - CDS 473508 - 473756 92 ## 473 238 Op 3 . - CDS 473740 - 474411 611 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 474 238 Op 4 . - CDS 474501 - 475661 435 ## COG0515 Serine/threonine protein kinase - Prom 475847 - 475906 3.0 475 239 Op 1 . - CDS 476060 - 476182 81 ## 476 239 Op 2 . - CDS 476227 - 477159 427 ## COG0515 Serine/threonine protein kinase 477 239 Op 3 35/0.000 - CDS 477182 - 477931 198 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 478 239 Op 4 . - CDS 477934 - 478821 82 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 479 239 Op 5 . - CDS 478844 - 479725 180 ## COG1651 Protein-disulfide isomerase - Prom 479764 - 479823 3.4 - Term 480256 - 480285 -0.2 480 240 Tu 1 . - CDS 480359 - 481072 525 ## BAD_0983 hypothetical protein 481 241 Tu 1 . + CDS 481257 - 482006 962 ## COG1434 Uncharacterized conserved protein 482 242 Op 1 . - CDS 482008 - 482088 60 ## 483 242 Op 2 . - CDS 482151 - 483512 1947 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 484 242 Op 3 . - CDS 483565 - 484185 596 ## COG0349 Ribonuclease D 485 242 Op 4 . - CDS 484130 - 484861 569 ## COG0349 Ribonuclease D 486 242 Op 5 . - CDS 484854 - 485486 417 ## BAD_0990 hypothetical protein - Prom 485551 - 485610 1.7 + Prom 485341 - 485400 1.8 487 243 Tu 1 . + CDS 485476 - 485895 117 ## 488 244 Op 1 11/0.000 - CDS 485680 - 486561 1011 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 486605 - 486648 11.4 489 244 Op 2 . - CDS 486681 - 489056 3207 ## COG1882 Pyruvate-formate lyase - Prom 489139 - 489198 6.0 - Term 489184 - 489225 6.1 490 245 Op 1 . - CDS 489244 - 489438 257 ## BAD_0993 hypothetical protein 491 245 Op 2 . - CDS 489485 - 491182 1898 ## COG0171 NAD synthase 492 245 Op 3 . - CDS 491260 - 492408 1082 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 492438 - 492497 1.7 493 246 Tu 1 . + CDS 492541 - 493341 686 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 493367 - 493426 2.0 494 247 Op 1 10/0.000 + CDS 493538 - 494383 1264 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 494410 - 494447 6.1 + Prom 494387 - 494446 2.7 495 247 Op 2 32/0.000 + CDS 494471 - 495289 336 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 496 247 Op 3 . + CDS 495291 - 495971 936 ## COG2011 ABC-type metal ion transport system, permease component + Term 496000 - 496047 11.8 + Prom 496378 - 496437 1.8 497 248 Tu 1 . + CDS 496474 - 496884 306 ## Blon_0973 hypothetical protein 498 249 Tu 1 . - CDS 496871 - 496975 62 ## 499 250 Tu 1 . + CDS 496962 - 497099 116 ## BLIF_1148 hypothetical protein - Term 497237 - 497280 -0.9 500 251 Op 1 . - CDS 497388 - 498089 409 ## BLJ_1150 Abi family protein 501 251 Op 2 . - CDS 498189 - 498341 235 ## BLJ_1150 Abi family protein - Prom 498438 - 498497 4.8 + Prom 497982 - 498041 1.7 502 252 Tu 1 . + CDS 498252 - 498650 131 ## BLJ_1149 hypothetical protein - Term 498362 - 498411 16.6 503 253 Op 1 . - CDS 498630 - 499235 473 ## COG2801 Transposase and inactivated derivatives 504 253 Op 2 . - CDS 499430 - 499891 289 ## BDP_0120 transposase - Prom 500022 - 500081 3.2 505 254 Tu 1 . - CDS 500136 - 500357 157 ## gi|212715662|ref|ZP_03323790.1| hypothetical protein BIFCAT_00562 - Prom 500570 - 500629 2.8 506 255 Op 1 . + CDS 500488 - 500898 124 ## gi|225352304|ref|ZP_03743327.1| hypothetical protein BIFPSEUDO_03920 + Term 501022 - 501060 -0.9 + Prom 501002 - 501061 2.5 507 255 Op 2 . + CDS 501082 - 503751 3248 ## gi|225352305|ref|ZP_03743328.1| hypothetical protein BIFPSEUDO_03921 + Term 503805 - 503851 11.5 - Term 503792 - 503839 5.1 508 256 Tu 1 . - CDS 503901 - 505280 979 ## COG0534 Na+-driven multidrug efflux pump - Prom 505353 - 505412 2.2 + Prom 505393 - 505452 2.2 509 257 Tu 1 . + CDS 505623 - 505778 186 ## gi|225352307|ref|ZP_03743330.1| hypothetical protein BIFPSEUDO_03923 + Prom 505785 - 505844 2.6 510 258 Tu 1 . + CDS 505883 - 507226 899 ## COG0582 Integrase - Term 507294 - 507359 18.4 511 259 Op 1 . - CDS 507374 - 508141 511 ## COG2184 Protein involved in cell division 512 259 Op 2 . - CDS 508144 - 508335 161 ## BLJ_1159 hypothetical protein + Prom 508361 - 508420 2.0 513 260 Op 1 . + CDS 508444 - 508680 92 ## gi|225352311|ref|ZP_03743334.1| hypothetical protein BIFPSEUDO_03927 514 260 Op 2 . + CDS 508772 - 509599 424 ## Blon_0981 hypothetical protein - Term 509556 - 509591 -0.3 515 261 Op 1 . - CDS 509658 - 510182 456 ## COG2189 Adenine specific DNA methylase Mod 516 261 Op 2 . - CDS 510207 - 511181 936 ## COG3177 Uncharacterized conserved protein 517 261 Op 3 . - CDS 511258 - 511698 495 ## BLIF_1154 hypothetical protein 518 261 Op 4 . - CDS 511720 - 512133 492 ## BLIF_1155 hypothetical protein - Prom 512174 - 512233 2.8 - Term 512145 - 512178 0.6 519 262 Tu 1 . - CDS 512264 - 512356 93 ## 520 263 Op 1 1/0.042 - CDS 512514 - 513638 911 ## COG0550 Topoisomerase IA 521 263 Op 2 . - CDS 513686 - 514735 754 ## COG0550 Topoisomerase IA 522 263 Op 3 . - CDS 514755 - 515183 556 ## BLIF_1157 hypothetical protein 523 264 Op 1 . + CDS 515611 - 515814 307 ## BLIF_1158 hypothetical protein 524 264 Op 2 . + CDS 515829 - 516170 450 ## BLIF_1159 hypothetical protein 525 265 Op 1 . + CDS 516550 - 516837 309 ## BLIF_1160 hypothetical protein 526 265 Op 2 . + CDS 516854 - 517102 351 ## BLIF_1161 hypothetical protein + Term 517119 - 517159 7.2 527 266 Tu 1 . - CDS 517350 - 517841 15 ## gi|225352328|ref|ZP_03743351.1| hypothetical protein BIFPSEUDO_03944 528 267 Tu 1 . + CDS 517947 - 519572 1266 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 529 268 Op 1 . + CDS 520700 - 523327 1922 ## BLIF_1165 hypothetical protein 530 268 Op 2 . + CDS 523402 - 523707 363 ## BLIF_1169 hypothetical protein 531 268 Op 3 . + CDS 523704 - 524024 284 ## BLIF_1170 hypothetical protein 532 268 Op 4 . + CDS 524037 - 525872 2075 ## COG3505 Type IV secretory pathway, VirD4 components + Term 526022 - 526059 3.1 533 269 Op 1 . - CDS 525899 - 527356 986 ## BLIF_1176 hypothetical protein 534 269 Op 2 . - CDS 527412 - 527951 293 ## BLIF_1178 hypothetical protein 535 269 Op 3 . - CDS 527966 - 529669 1201 ## COG3942 Surface antigen 536 269 Op 4 . - CDS 529674 - 531209 1962 ## COG3451 Type IV secretory pathway, VirB4 components 537 269 Op 5 . - CDS 531188 - 532066 874 ## BLIF_1183 hypothetical protein 538 269 Op 6 . - CDS 532070 - 532420 421 ## BLIF_1184 hypothetical protein 539 269 Op 7 . - CDS 532455 - 533300 1007 ## BLIF_1186 hypothetical protein 540 269 Op 8 . - CDS 533315 - 533548 485 ## BLIF_1185 hypothetical protein 541 269 Op 9 . - CDS 533437 - 534312 467 ## BDP_0965 hypothetical protein - Prom 534497 - 534556 3.0 542 270 Op 1 2/0.021 + CDS 534520 - 535635 240 ## COG0464 ATPases of the AAA+ class 543 270 Op 2 . + CDS 535639 - 537843 718 ## COG1404 Subtilisin-like serine proteases + Term 537904 - 537964 22.0 - Term 537892 - 537951 18.1 544 271 Op 1 . - CDS 538165 - 538989 1016 ## Blon_0524 LPXTG-motif cell wall anchor domain protein 545 271 Op 2 . - CDS 538926 - 542300 3812 ## Blon_0524 LPXTG-motif cell wall anchor domain protein Predicted protein(s) >gi|222441570|gb|ABXX02000003.1| GENE 1 3 - 132 84 43 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0882 NR:ns ## KEGG: EUBREC_0882 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 43 7 49 221 67 65.0 1e-10 MAIITLFHGSPHESVTPEYGLGNDKHDYGRGFYLTKSVELAKE >gi|222441570|gb|ABXX02000003.1| GENE 2 141 - 323 87 60 aa, chain - ## HITS:1 COG:L0310 KEGG:ns NR:ns ## COG: L0310 COG0732 # Protein_GI_number: 15672634 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Lactococcus lactis # 6 60 352 407 407 60 53.0 9e-10 MMNELVVKDFLEQEILVPSLPEQRQIGAFFDCLDSLITLHQRKLELLRNIKKSMLDKMFV >gi|222441570|gb|ABXX02000003.1| GENE 3 730 - 1218 276 162 aa, chain - ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 17 160 41 184 184 119 45.0 2e-27 MTGIVCFHNPDEENGYLSNWYPSHFVVDDVEFSSMEQYMMYRKACCFSDAETAARILETD DVAEIKRLGRRVAGYDDHVWNGVRQIEVYEGLLAKFRQNAELGARLEVTGIALLAECAVK DRIWGIGLSMHDPARFNPSQWRGRNLLGYALMLTRRKLSRID >gi|222441570|gb|ABXX02000003.1| GENE 4 1215 - 1631 482 138 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0883 NR:ns ## KEGG: EUBREC_0883 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 137 12 148 149 200 72.0 2e-50 MQAYPEVYRDDVVESQGKLFDYVAQSFPGKSTEDFIATYMTSKTRKSIDEAKAYVNTMDA EELWKYFTETEHYQLKDGKALKGFMPDWIGEFYAYYQWFYGLPSSEVITRVPLNFLKKAY FGLHDLDLELAVRKVGEE >gi|222441570|gb|ABXX02000003.1| GENE 5 1643 - 2290 311 215 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23335919|ref|ZP_00121150.1| COG0081: Ribosomal protein L1 [Bifidobacterium longum DJO10A] # 2 197 4 198 226 124 38 7e-27 MAIITLFHGSPHESVTPEYGLGNDKHDYGRGFYLTKSVELAKEWAVCRPDESNGWVHQYE LDTNGLRILDFQEHNVLAWLAELMKHRDAADSKRYRVLAAKFIAKYGIETSSYDIIKGWR ANASYFYIAKEFVRDNVDVDILEELLSLGGLGIQYCIKSEKAYGQLREVKDGLLSVSYSE FNDKYNQRDVEARQNMRDLIDSDANTVTNVFSTLL >gi|222441570|gb|ABXX02000003.1| GENE 6 2299 - 2898 336 199 aa, chain - ## HITS:1 COG:L0310 KEGG:ns NR:ns ## COG: L0310 COG0732 # Protein_GI_number: 15672634 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Lactococcus lactis # 10 199 219 407 407 265 65.0 5e-71 MAEQHGKALVPQIRFAGFTDPWEQRKLGEVAHFINGRAYSQNELLSSGKYPVLRVGNFYT NDSWYYSNLELEDKNYAYEGDLLYTWSATFGPHIWHGNKVIYHYHIWKVQLEAALEKLFA FQLLERDKERILSDKNGSTMVHITKTGIENTSVLMPCSVEEQRRIGAFFDRLDSLITLHQ RKLELLRNIKKSMLDKMFV >gi|222441570|gb|ABXX02000003.1| GENE 7 2900 - 5461 2964 853 aa, chain - ## HITS:1 COG:lin0522 KEGG:ns NR:ns ## COG: lin0522 COG0286 # Protein_GI_number: 16799597 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Listeria innocua # 8 486 9 485 529 360 41.0 5e-99 MNKQQLASKIWESANKMRSKIEANEYKDYILGFIFYKFLSENELMRLKANDFTEDDLPQL TEDNPDIVEGVQDECGYFIAYDNLFSTWIKKGNDFEISNVRDALSAFSRNINPARKRVFD GIFDTLQTGLSKLGTDARSQSKAARDLIYLIKDIPMDGRQDYDVLGFIYEYLISNFAANA GKKAGEFYTPSEVSQLMSEIVAWHLQGREQIKIYDPTSGSGSLLIHIGQAVARRNGNPDS IMYYAQELKENTYNLTRMNLVMRGILPDNIVARNGDTLEDDWPWFDTLENKEETYNPLFV DAVVSNPPYSQNWDPTDKEIDPRFSYGIAPKSRADYAFLLHDLYHLRADGIMTIVLPHGV LFRGGEEGQIRKNLIENRHIQAIIGLPANIFFGTGIPTIVMVLRKKRDDDRVLIVDASKH FIKDGKNNKLQASDIKRIVDVVSNNRTVPKFSRLVSIDEIRANDYNLNIPRYVDSSEDAE MWDVYASMFGGVPKSEVEQLEEYWNAWPSLKAELFRDNGACYACDHDDIATVVRNNADVQ AFIASYGQAISGLPADLRSRLVAHPEQVDALGQETAIGKELDAMVADTALIDPYDAYQKL DDAWNGISIDLEVLGSEGFDAVRAVDPNMVVKKKAGKDVEVQDGWIGRVLPFDLVQRELL HDDLAAIETDERRVQDIDSEVETILEGFDEDDKQNSDAINQDGDAFVAAELKKAVKAIGK NPSSDFERGLVQSQKLFDEAKKLKSGIKTKRNALEEKTYNTIKALSDEEARRLLEAKWIT PLQKQLEELPNAVIDELIGKVNALKNKYATTYADVCGQIDEAEKELAGMLGDLTGNARDM AGLEELKALLGGE >gi|222441570|gb|ABXX02000003.1| GENE 8 6129 - 9314 3000 1061 aa, chain + ## HITS:1 COG:L0308 KEGG:ns NR:ns ## COG: L0308 COG0610 # Protein_GI_number: 15672632 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Lactococcus lactis # 6 1026 3 979 995 348 28.0 2e-95 MFYDKESDFEDDLVAVLKRHGWTDGVLEYPTEQDLIDNWASILFDNNKGIDRLNGQRLTK GEMAQILEQIETLRTPLALNSFINGKTVSIKRDNPRDEAHYGKEISLKIYDRQEIAAGQS RYQIARQPIYPAKNKMLNDRRGDVCLLINGMPVIHIELKKSGIPISQATNQIAKYAHEGV FTGLFRLVQVFVAMNPDDAVYFANPGEGDFNDDYFFHWADYNNEPTAANKHVGQDEWKRF ASDLLSIPMAHQLIGFYTVADSADGCLKVLRSYQYQAVNAISDRVRTCKWDEPVPSGTPG RPGGYVWHTTGSGKTMTSFKAAQLVADSKDADKVVFLMDRIELGTQSLLEYRSFADDVDD VQGTENTDVLKAKLASIDPKDTLIVTSIQKMSNIKAGEGHITEEEVKKLAGKRIVFIIDE CHRSTFGEMLQDIRHSFPNALYFGFTGTPIHEENRKKGSTTSMVFGDCLHRYSIADGIRD GNVLGFDPYMVLTYRDKDVRQAVALQKAKAATVEEAQADPVKAEVFYHYMDPNQMPMGPM ETQAGERIKGIEDYLTSAQYAQGTPHEGKVVEDILDQFPLLSRGNKFHAMLATSSIPEAI SYYRLFKERAPQMHVTALFDPNVDNSNGAILKGDALQEIIGDYNELFGKDFIIPTWPKMK KDITARLSHKRPYLTVDQHREERLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYENIIQAF SRTNRLFGSDKPFGTIRYYRKPHTMKGYIEAAVKLYSGDKPLDLFVQKLPENVRLMDARF EEIASVFRAEGVEDFMKLPESVEACRKFAKLFSELNDFLEAAKVQGFTWQQREYSVTHDD GSVEVVRPELDERTYLILVQRYKELFAGDGEGHSEGPEAPYDLDGHITEIDTGLIDTDYM NANFTKWLKALGGGDTALLASAEEELHKSFASLSQEEQRYAELFMHDVERGEIELEEGKT LRDYITYYANSAKNSQVEKITKAFGVDGALLNEMIRLDLTEATLNEFGRFDRLKASINKP LAKAFFSKPDSSVTQFTANLLATKLLKSFILEGGFDLDDRK >gi|222441570|gb|ABXX02000003.1| GENE 9 9343 - 10089 922 248 aa, chain + ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 135 237 151 253 257 89 39.0 5e-18 MSVVDEAKLGYLDFLSREDRVRHHRYVEEMKQYDMMRSGDINAISESAKLWDSGLYGHLS DDPLKNAKYRFVTTITLATRFAIEGGMDEEDAYNASDLYIQDLDNCKTPEDVRRLHTDMM TFFTWAMADMQKTDTHSKAVNECMDYIHYHLHEKITVAILAQHVHLNPTYLSELFARETG TSLSQYITDKRMEAAENMLKYSEYSFNEIAQILAYRSQSHFSKVFKKHSGMTPGEYRAKY SQNGIWPE >gi|222441570|gb|ABXX02000003.1| GENE 10 10304 - 11116 796 270 aa, chain + ## HITS:1 COG:no KEGG:BAD_0620 NR:ns ## KEGG: BAD_0620 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 270 1 270 270 540 100.0 1e-152 MGMPLDLYVIRHGESEANVIISAGEQGDNSLYTQDNVTVPDRSWRLTATGRKQADCIGRW LVSQQPLFDRYLVSPYVRTRETAATMALPKAKWEETRVLRERSWGEINTITKDDFKTNYA RNWMFKNTDPLYWRPPAGESIADVAENRVHNLLTSLNRKSDAESVVMVSHGDLMLALMLT LEDLSDEEFMHRAASDEWKITNCTCFHYSRRDPATGRTHKRFCWEQTARPVFDDAEGRWA VKVDDWREFKRPVLSNGDLVDVVHAVDRHL >gi|222441570|gb|ABXX02000003.1| GENE 11 11277 - 12566 663 429 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 22 406 5 413 447 259 36 1e-67 MSNLFTWQVHGDGKTLKPGEVVEPDERLTWPRTAEIGAQHVIAMFGATFLVPILTGFDPS TTLFFTAMSTALFLLINKNVLPSYLGSSFGFIAPIAAVASAHKGLAVASFGIMVTGILLA LIGVLVHYAGAKWIDIIMPPVVNGAIVAIIGFNLAPSVWNNFKVAPDTAIVTLVAVLLVA VLFKGLLGRLNILIGVIIGYAYACFRGQVDFSAIGKAAWIGLPEFRLPQVDFTILPMFIP VVLVLIAENVGHVKSVSQMTGRDYDDQIGTALFADGLGTTIAGFGGGSGTTTYGENIGVM AATKVYSTAAYWCAAAFALILSLCPKFGAIINTIPAGVLGGVTTLLYGMIGMVGIRIWVE NKVNFDKPLNIMVAAITMIIAIGQFAFAFNGISFNGIAIGTIVVLVAYHGLKAIGKATGT IAKDDPDIL >gi|222441570|gb|ABXX02000003.1| GENE 12 12738 - 13448 804 236 aa, chain + ## HITS:1 COG:SA0122 KEGG:ns NR:ns ## COG: SA0122 COG1028 # Protein_GI_number: 15925830 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Staphylococcus aureus N315 # 8 199 5 202 258 73 28.0 4e-13 MSTAAGKKIAIVTGSALGLGYELTRQLIAKGWFVAGIDFNGARQTELSKTFAADEYRAFV GDISDESFVKNSIAAISKIGHIDLLINNAGQPSFKVPTAYEAADVDKCLKGLKGMVLWSV ETLKADGERDLKIANVMSTAATRGNPNESVYCATKWGEKGYTKSLQAAYKGTSVKIVGVY PGGIDTPFYRDSHDYVSEEKQHTFMRANQLAEVILFNLVNEANLTVTDIEINRNPA >gi|222441570|gb|ABXX02000003.1| GENE 13 13326 - 13553 149 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFHVKYYARCANLITVAYARYFFLRSFNPSYSLYSRRIAVDFDISDGQIRFVDQIEQNH FGQLVGTHEGMLLFF >gi|222441570|gb|ABXX02000003.1| GENE 14 13555 - 15627 2196 690 aa, chain + ## HITS:1 COG:Cgl1415 KEGG:ns NR:ns ## COG: Cgl1415 COG0513 # Protein_GI_number: 19552665 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 27 496 3 444 448 290 40.0 6e-78 MPDTVFDEDTLAAASEVMGEEEERPLTFAELGVPGPLVRVLAADDKKTAFPIQADTLPDS LAGRDILGRGRTGSGKTLAFSIPLVARLGEVDANEYENMSQFRHEVDRVKQAHAKERRAD DFVPHPRGLVLAPTRELANQINDVLMPLAQIYGINTTTVYGGVRYARQIRDLQAGADIVV ACPGRLEDLIEQGALTLDKVEVAVIDEADEMADMGFLPPVKRLLGQISFDAQIMLFSATL DHGVDEVVETFLSDPKVHSVDSATATVDEMTHHVFKTTQGNRHELVRTLASGKGRRILFT RTKFQTQKLAKDLTQNGIPAAELHGNLSQNQRDRNLAAFNSGDVNVMVATDVAARGIDVS GVELVVQVEPPEDPKSFLHRSGRTARAGHSGDVVTIILPNQRRRTRRMMREAGLTVEPID VTPDSPEVLELVGEVAEPVFGWTLEQSQPVGNPRRRKNGKGDADGERSGRPNRSGGRNKD RGKDKGGKPFKSERKDRRDRDQREERNDSAKKFEPKKNRAERRAAKFEGRDNREFEAREH RWEHPEIQEERREQHEEKRNNKRREKYTRLHEQQRSDNEQRETTNKRRNDGDYGNTDNRR KPGKKKSGQLAKKQGAPSKKQRKSEARAERRYDDDRRSKGKKHDERSSDAKRYDRHTEVK RGGRGERHDKHAGQSRHRHANIRKAPFRMR >gi|222441570|gb|ABXX02000003.1| GENE 15 15769 - 16557 982 262 aa, chain - ## HITS:1 COG:RSc0748 KEGG:ns NR:ns ## COG: RSc0748 COG0390 # Protein_GI_number: 17545467 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 11 256 13 258 272 132 33.0 9e-31 MSGNYYSIDIWGLLIALVMVAVAAGISEAMRMGIGKTLLWSACRALLQLCAMGFIMEFVI KSNNPWLVLLLVMFMLIAAVQITLSRAKGVPRGLAGPVFLSLVITMLIMISLVTELIIRP QPWYAPQLVVPLTGMLLGNTVSALAVGLSRFFESMKERRDEVDTLLALGATAWEAARPSI VSSIRLGLLPTTASLASSGIVTVPGMMAGQIIAGGNPIDAAKYQFLILAAIAALTLLADS LIMVMAYRKCFTADDQYNPITG >gi|222441570|gb|ABXX02000003.1| GENE 16 16554 - 17390 185 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 36 261 16 229 245 75 26 3e-12 MLPTGSQAVWCWIMQYVFSASNVSCVVPVDGEQRTILSGLSVDMKLGEIVDLVGPSGSGK SSLLTAFARLNPNANGDFQLEGRSASEFTPQQWRSQVAYLPQKPVLIGSSVAEAIRLPFT LAIRAGEGKQGFGKKWSSGKSLKPADLLPDDRIRATLDAIGCADIDLGRAPHDLSGGQAA RVSLARTLLTSPKVLLADEVDAGLDDENADKVASIMAQAAERGMTVIRIRHRPPDGRATR ILTLANGVLQSANAPRTTATNDSNDFAAQSDSMQGAQA >gi|222441570|gb|ABXX02000003.1| GENE 17 17428 - 17697 287 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351820|ref|ZP_03742843.1| ## NR: gi|225351820|ref|ZP_03742843.1| hypothetical protein BIFPSEUDO_03421 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03421 [Bifidobacterium pseudocatenulatum DSM 20438] # 12 89 1 78 78 141 98.0 2e-32 MHGNIASASHELKTLLAILYTRADLIEFRHKRDKSIDEPLNELRFDVDRMNMIISNLLDV VQADNPENTVNAAHDGVRGVIGKGKNATE >gi|222441570|gb|ABXX02000003.1| GENE 18 18004 - 18666 377 220 aa, chain + ## HITS:1 COG:no KEGG:BDP_0844 NR:ns ## KEGG: BDP_0844 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 12 182 61 231 461 240 67.0 4e-62 MVIAVIAGIVGLVIAWLLSDVFVVFGVELGPRVIAWAGCSCAIIGFAVSHAMLHRGVLRA VAVILVVCAVFSTATGIDQAYGEYATIGSLFGQDAYNEADLTGMAKRNDLISVTQWRQEA ADGSISDIPAHGEVSKVNIPATTSHFEARQALVYLPPAALVTAKHKPALPVILMMSGQPG SPGARVCRGRHSNHDGRLRAASWRTRTHCYCGRPVGRRFA >gi|222441570|gb|ABXX02000003.1| GENE 19 18584 - 19240 402 218 aa, chain + ## HITS:1 COG:Cgl0942 KEGG:ns NR:ns ## COG: Cgl0942 COG0627 # Protein_GI_number: 19552192 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 3 188 223 425 426 90 28.0 3e-18 MMDDYAQHHGGLAPIVIAADQLGDDSHNTLCVDSPVYGKALTYLTKDVVDWVKTNLPAAR QAQDWAIAGFSQGATCSLQIGANHPNLFSTIIPTGSELKPTNGSESSMISRFFHGDRTAY EKQIPINAIRNHAPSNQTLVIGAGERDRESVRNVELIAPVAQQEGMHVTAVESLGNAHDW HAVRDTLRYGLVVFGYNTGLSDAKPKLADYPNLKRISI >gi|222441570|gb|ABXX02000003.1| GENE 20 19265 - 21811 1985 848 aa, chain + ## HITS:1 COG:Cgl0941 KEGG:ns NR:ns ## COG: Cgl0941 COG2898 # Protein_GI_number: 19552191 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 96 846 57 801 804 274 29.0 7e-73 MTQSQESTVKPLFGFRALMADLADWIREHRMTLGFVLFITLFNVGMQLVCGIRHTQFPPQ LSRVSFDALAHGRWYTAPISLLSVPQLGRLLIDIPLILIAFGLCETVIGKAKTAWVSLIT TLGGIALGMGLCSLFAGKSPQWHAISHDGAILGPLVVVVGTLMCASAFTAMLWRRRIRVI GYSVVLILFLYRGEAGDYCLLASALLGHVLGYLMASESQGDVYRHGALYEMRRLIGMAAG VQAVGSLVAVSSRQSFGLLSMFGLLTGSTEFDTEQVLDCLNGSSHANCFAQYRMMRFTMP GNWLVSLMPTLMLLLIAWGLYRGRRIAAALSVLFNACTVVLAMLFYVVLPLQYVGDSQAD ALPALARHGAFHAMFSTMALPLIFIVIVIAFRQCFTIRTRSEIMLRAAAGALSAFLLLGL MYAGYGLASPDDFNESPQLIALLADYVQRLLPIGLLSGIEPEFVPVGRISLLVYQCVGPV FWIIALLCAWDCLRDRSMVNDASRHRVDEIIPLGGESMSFMTTWEGNDYWFSATGRSAIA YRVSYGIALTVTGPFGDPSEYADDLIDFATFCARHSWTPVFYSVHESQRAELTKAGWDSL DVGTEMVVNPNEWQTRGKKWQDVRTAINKAKRDGITDVLTTFKEAPFSVQTQIREISAQW AGKKALPEMGFTLGGVDELIDSRVRLLYAVDGNGKVLGVTSWLPTYRDGTIIGWTLDFMR HRTDSVNGIMEFLIARMAERLRDEGNVEFMSLSAAPLAGMGSNKGEHEESEVLRHALQMV ADIMEPAYGFHSLFRFKLKFHPDEEKVYICYPDAAKLPQISLAVAQAYVPSLTPAEAMRF VRTIAPRD >gi|222441570|gb|ABXX02000003.1| GENE 21 21898 - 23361 1834 487 aa, chain + ## HITS:1 COG:Cgl1417 KEGG:ns NR:ns ## COG: Cgl1417 COG0362 # Protein_GI_number: 19552667 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Corynebacterium glutamicum # 10 487 8 484 484 589 62.0 1e-168 MEGASMSAEANVGVVGLAAMGGSLARNLAHHGNKVAVFNRSYGRTEKLMNEHGNEGEFFP AKTLEEFVDSLVKPRTAIIMVKAGEPTDAMINALADLMEPGDIIVDAGNAYFPDTIRREK EISARGLHFVGCGVSGGEEGALLGPSMMPGGSEESWKTLKPIFESIAAKAEGEPCVTHIG LNGAGHFVKMVHNGIEYSDMQLIAESYDLMRRGLGMTPAEIGDVFEEWNKTELDSYLIEI TAEVLHQADKKTGEPLVDVIVDHAGMKGTGTWTVQTALSLAVPVTGIAEAVFARGLSSEA DLREEAAKQGFNGPDGNLNLTDDEKKAFIEDIRQALYASKIVAYAQGFNEITTAAEEYGW DIDLAAVARIWRGGCIIRAKFLNRISEAFESGEANVSLLFAPYFKNAIETAEKSWRNVVA QAAVNGLPTPAFASSLSYFDGLRSKRLPAALIQGQRDYFGAHTYQRVDQPGAFHTLWAEP GREEIEA >gi|222441570|gb|ABXX02000003.1| GENE 22 23496 - 24293 651 265 aa, chain - ## HITS:1 COG:all3753 KEGG:ns NR:ns ## COG: all3753 COG0300 # Protein_GI_number: 17231245 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Nostoc sp. PCC 7120 # 4 254 9 259 263 186 36.0 5e-47 MAYALITGASSGIGREMAALFAADRHDLIITARSQGKLDDVKRTLEHRYGVHVETVALDL SESDAPQQLHDYTVSQGFEVDHLVNNAGFADWTGFLDADWHRQHEMMQLNMAALAELTYR YGRDMREQGHGRILNISSVASMMAGPYMAIYFASKAFVRSLSEAVSYELRDTGVSVTCVC PGPTSTGFAKAANMHGMNFFTLTKPATAYQLATYAYRKMKQGRTLAYHGYLTKAGAAAER LLPRALTRRVAAIMNGGNPRNQHRE >gi|222441570|gb|ABXX02000003.1| GENE 23 24651 - 25832 828 393 aa, chain + ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 3 390 2 382 384 337 41.0 2e-92 MTYDFDTPVDRSGTYSLKWEEAGDALPMWVADMEFQTAPQIRAALQQRLDHGIFGYSIVP PEWNQAYVDWWHRRHNLDIDPESLVFSTGVVPAISSMVRKLTTANENVLIQTPVYNIFFN SIINNGCRVLESPLEYDGSGHYSINWADLESKLADPQTTLMILCNPHNPVGRIWDRDTLA RIGELCWNHHVTVISDEIHCDLTDPGYDYVPFASVNEQCAMNSVTCMAPTKTFNIAGLNT AAVMIPNPVLRHKVWRALNTDEVAEPNAFAMTATLAAFNESEPWLEELRAYLAGNKAEAR AMINEYNAAAAPERRIALIESHATYLLWVDCSKLTHDTALLCEHLKRNHQVMFSEGAEYG GNGHDFIRINVACPRSTMQEGFNRLFAGLRDFR >gi|222441570|gb|ABXX02000003.1| GENE 24 25973 - 27535 1251 520 aa, chain + ## HITS:1 COG:MT1494 KEGG:ns NR:ns ## COG: MT1494 COG0364 # Protein_GI_number: 15840906 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 15 520 10 514 514 733 69.0 0 MTETVSSVLGTPEEWTNPLRDPRDLRLPRIAGPCSIVIFGVTGDLSRKKLLPAIYDLANR GLLPPSFGLTGFARRDWTEDHFKDFVKENVQAHCRTPFKEATWKQLADGIRFVQGTFDDP KAFERLSNTVAELDRDRGTRGNHAFYMSVPPRAFPQVSRQLADCGLAKSDKGAWRRVIIE KPFGHDLASAKELDRVVSEVFDPSSVFRIDHYLGKETVQNILALRFANAMYEPIWNNNYV DHVQITHAEDIGVAGRAGYYDGIGAARDIIQNHLLQLMALTAMEEPVSFSAADLTAEKTK VLSAVRLPKDLAAHTARGQYAAGWQGSHEVVGYLDEKGINPASTTETYAAIRLDVDTRRW AGVPFYLRTGKRLGKRVTEIAVVFKRAPHLPFESTATKELGKNAIVIRVQPDEGVTMRFG AKVPGGTSMEVRDVSMDFGYGRSFTESSPEAYERLILDVLLGDPPLFPTTREVELSWQIL DPIEEFWSTLGQPQPYRSGTWGPQEAVEMLARDGHRWRMP >gi|222441570|gb|ABXX02000003.1| GENE 25 27544 - 28488 947 314 aa, chain + ## HITS:1 COG:MT1493 KEGG:ns NR:ns ## COG: MT1493 COG3429 # Protein_GI_number: 15840905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-P dehydrogenase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 299 5 290 303 205 42.0 8e-53 MKNTETREISAKIDELHEERGEAALGRVLTLLISTNETSLEHDLAVANNASREHPCRVIA IAPNSRRVDAAADDGKPHTFLDAEVRFGSDAGAGEIIVLRPIGGLVHHPDTLVIPLLVPD APVVAWWPNEAPANLSNDLLGSMARSRITDAMHSSNPMRTMDDLRRNWSSKNVDMSWTRL TVWRAMLASMLDQPPHLPVSGVRVTGPKNFLPLNLLAAWLRLRLNVPVVVEDDPNATAVT GVYLTRSDGVLSLERPSTDDGIAVLNVPGQSPQTMSVPARTIEECLSEELGRLYPDEIYA EVVTQGWDLINSKH >gi|222441570|gb|ABXX02000003.1| GENE 26 28517 - 29323 753 268 aa, chain + ## HITS:1 COG:MT1492 KEGG:ns NR:ns ## COG: MT1492 COG0363 # Protein_GI_number: 15840904 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Mycobacterium tuberculosis CDC1551 # 13 268 7 245 247 134 36.0 2e-31 MQEKHMAERTTVVYPNPQILAEAVAARTLLTITDLLSEPNRTRVDIAVTGGTDGNRVFDA MNASPLNDAVDWSRVHVWWGDERFVAADDDDRNAKQAREAWYGKLVADGRMPAGNIHAMP SDERNLESVAAASPEQTDAVLAEAAAQYQRELIEQLGENPALDIAMFGMGPDAHFASLFP DHGESEIDDPHVLVAGVRDSPKPPPLRLTLTVPMIARSKHTWVFTSEVRKADAVAAAFAQ RNNPHAPSSYADGEELLWLIDKGAASRL >gi|222441570|gb|ABXX02000003.1| GENE 27 29537 - 31267 1529 576 aa, chain + ## HITS:1 COG:Cgl1213 KEGG:ns NR:ns ## COG: Cgl1213 COG0477 # Protein_GI_number: 19552463 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 14 480 7 446 487 198 30.0 2e-50 MEQPSKFQHQLQPDMPSSSTMSTSPHPEQTPPWGALWVLALGLAMIVLDSSIVNVSIPTI IDDIGIDLTDAQWVTSLYNIVLAALLLPFGKLGDAKGRKLVFPIGTVIFVASSLLAATSQ DAGMLLTARALQGIGGAMIMPNTLSTVSATFRGKYRAAAFGVWGAVMSSAAALGPLLGGV LTETLGWRWIFLVNLPLGIIIFVATIPLVPKTGGHTSNITSSTASSTIRFQSIDVDIPGV VLSALTSALLVFGLIEGETYGWWKQTSTQLKMGGLTWNHGWLSPVPICLVAGMLLLVVFI TVELARGKAGRPVMLDMTLFRIKTFSWGNLSAAAIAAGEFALVFALPLYLINARGLDTLQ AGAMLAVMGLGSIIAGSQAHMLASKFTPVDVVQLGLVIEIIAVAVIAVLMPVEFAVWWQL LPLTAYGCGLGLASAQLTSVVLSEVPIPQSGEGSATQSTVRQLGTAMGSAISGAALTMAI NGTLPARLESLGLPAKVGDGLAKAVSSSAGGVIGSFRSGDGSAAQFGDEAPKIADAMTSG FIEGNRWTLLVAGCMLLIGLLASVAVRRAASTHSTH >gi|222441570|gb|ABXX02000003.1| GENE 28 31388 - 31858 512 156 aa, chain + ## HITS:1 COG:BH1243 KEGG:ns NR:ns ## COG: BH1243 COG1490 # Protein_GI_number: 15613806 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Bacillus halodurans # 1 153 1 145 146 152 53.0 3e-37 MKVVVQRVSQASVDVVNELGTIDPTFEPQQIGSGFMLLVGVTDEDGEEQISWLAHKILNL RVFEDEQGKMNRSIKDIGGEILSISQFTLFADVRKGNRPSFVKAGKPEHANITWIKFNEA LRSGGVPVREGRFGAHMRVGLINDGPVTIAIDTDNL >gi|222441570|gb|ABXX02000003.1| GENE 29 31961 - 32812 667 283 aa, chain - ## HITS:1 COG:no KEGG:BAD_0636 NR:ns ## KEGG: BAD_0636 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 3 280 20 297 301 489 85.0 1e-137 MSDMHEVRQALLTGERAEFQASGKRYIDTIFDDGESPLKHAHDIELKSSSFKWKYPLWYC SDILAKDCTWFEMARAGVWYTNTIRVEDCTFEAPKNFRRCHDVALRNVDFVNAEETLWAC SNVSLENVSARGDYLAMNCSDIKAYNLRLVGNYPFDGARNIEITNSRLISKDCFWNCENV TVRDSFISGEYLAWNSRNVTFENCTIESLQGLCYVDNLVLRNCRLINTTLAFEYSNVDAD IHSTIDSVFNPSSGTIRADVIKELTLDPMKIDPNKVTIITDNR >gi|222441570|gb|ABXX02000003.1| GENE 30 33065 - 33862 921 265 aa, chain + ## HITS:1 COG:BS_azlC KEGG:ns NR:ns ## COG: BS_azlC COG1296 # Protein_GI_number: 16079724 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus subtilis # 12 234 28 248 254 236 52.0 4e-62 MSQRNGGVKTRAFKAAFPKVLPICISFFFLAMSYGVLMGTRGFSFLWPLYMSAFIYTGSM EFVTVNLLVSAFNPFATLMLALMMGTRHLFYGLSMLGRFKNMGAKKPYLIYAMCDETFAV NNSAQIPADVDRGWFYFFVSLLNQVSWVAGATLGGIVGWRLTFDTTGLDFVMTALFVVIF VDQWLTTKRKSHMAALTGTVVPVICMALFGADNFMIPSLIAMLVMFIMLRPYLDDLKPDN VGKRDDADGAVESAADRNEVGEARS >gi|222441570|gb|ABXX02000003.1| GENE 31 33859 - 34194 424 111 aa, chain + ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 1 110 1 110 110 115 61.0 2e-26 MIMTTWQGVVTVLMAVLGTIITRFLPFVLFPESKKPPHIIDYLGNVLPYAMTGLLVVYSL KNVNPFAGSHGIPEAIAIAAIVVLHVWKRNMLLSIAGGTVVYMALLQLVFA >gi|222441570|gb|ABXX02000003.1| GENE 32 34394 - 36802 3105 802 aa, chain + ## HITS:1 COG:L13150 KEGG:ns NR:ns ## COG: L13150 COG1966 # Protein_GI_number: 15672391 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Lactococcus lactis # 23 783 9 777 784 677 46.0 0 MTSAASTANAAVPAPGKLEFKDDYTPEEAERVIRNSKGLPVGVKPKMVWTWPKALLWAVI AIVCAIGWAILAVSRGEQISAIWFVVVALCSYAIAYRFYAYYIQIKIMRTDDANATPAER VHDGANFERADRRVLFGQHFAGISGAGPLVGPILAAQMGYLPSVMWIILGVIFAGAVQDM LMLWISAKRRGRSFGQMATDEMGKFGGTILSIFLIVMTAIAMAFLALVAIKAMASSPWAV FSIGMTIPIALIMGCFQRFLHRSVIETTVLGFVLLVIDIIAGGWISSVPAIADVFTLNAK ELVIALVIYSFAAAALPHWLLVTPRDYLSTLMKIGTLVLLVLGILIANPSVQMPALTEFA STSTGPTFAGDLFPFLFITIACGALSGFHGAVSSGLTPKAVEKENQIRMIGYGSMLVESF TAVIALITAITISQGIYFSTNMSASQISTASGVTLTATSTPDERAEAAVKAVDSMKVSDI EGNQMKVTWDSVDENGNAKTYEGADALKQAASDIGENTIVSRTGGATTFAMGMANFLKSY LGGHDSMAFWYHFAIMFEALFILTTVDNGTRVARYQIGELLGNVRKLKKFADPTWKPGNI ITTLIATALWGGLLWVGVCDTNGGINAMMPIFGISNQLLAAACFMLVTVCVAKLGYKKYL WIPVVPLVWDVAVTFTADFQKIVGPISYFATASKYQTLIDGGTLEGEALVNAKAALSNAY LDGVLSVFFMVMMGVFLVVGIYQTVKILAKGKFGVETTSEEPFVESEWFAPSSLIATKLE KKVQREYAAKSYELAQKEQAAA >gi|222441570|gb|ABXX02000003.1| GENE 33 36802 - 37029 257 75 aa, chain + ## HITS:1 COG:no KEGG:BLD_0645 NR:ns ## KEGG: BLD_0645 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 21 75 11 65 65 91 76.0 1e-17 MQGFTTMVRRIWSALLKAKAGFVWYVREFSGEAKYDHYLEHFASEHPCETPLTEREYWRM REEYDRKHPNTSCCC >gi|222441570|gb|ABXX02000003.1| GENE 34 37170 - 38405 1178 411 aa, chain - ## HITS:1 COG:L100350 KEGG:ns NR:ns ## COG: L100350 COG1472 # Protein_GI_number: 15672482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Lactococcus lactis # 38 409 36 401 403 209 35.0 6e-54 MRRVHVHFARCAAALCAIALPLSFAGCSSSASLNAGSNQSEQSNSQQSDASHDALDKSNV PSVVDDSPHGRAVAAVNAMSLAERVGQLVMAPLYAGSDPSSLQDLIVNQHVGSVLIIGNW NSGTAGVATATSTLQSYAPGNNQLLMTTDQEGGLVQHLQGDGFDQMPSATNQGSMSTNQL RQSAAVWGSQLKSAGINVDLAPVVGTVTVDRASNGPIGALYRDFGLDADGNADHAKAFIQ GMADSGVGSAIKHYPGLGSVTGNTDFTADGILDTTTTLDGAEIGAFNSTLEANPSMVMMS LATYQAIDPNNPAVFSSALVTDYLRNTVGFQGVITSDSLSATALGGIQPSDLGVRLVEAG GDLACIGAFDYVQQVLDGLNAKAAADSAFADKVTQSAIRVMTLKYSMGLAS >gi|222441570|gb|ABXX02000003.1| GENE 35 38560 - 41811 3901 1083 aa, chain + ## HITS:1 COG:Cgl0762 KEGG:ns NR:ns ## COG: Cgl0762 COG1615 # Protein_GI_number: 19552012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 75 985 4 897 967 598 38.0 1e-170 MFGPMFDPESGPNRSQGQRANKSGNDDPIILNVETDGDNTARSSANMPPRGPSGPRITRQ PNRPRKSSNGNKILIGVVLALAIIIGLFFGLAQFITDVMWYAQLGFQSVIWTQLGTRVGL WVAYALLIAAVGFLSASLAIWARPDAADGSTIRINGDTIEVGKGVSSKNARRVAVVISLI VGLMFGSQFNANWSEILLMFNAQSFGTTDPQFGIDNGFYVFVLPGLKLIMSAVSLLLLAG IIFSIVTHVMMGGIRITMPVHGRGLFHITKRARRQIGIWLMLNMFAWATNQVLGVFSHLT QEGSRITGATYTTVNATIPVTFIMAAITVILGVILGVWIMKSHALEGQAPIAVRASEALK AWKVPTVAIASAIVVSLVLTVAWPMLLQRFRVNPNAQEMESTYIQRNIDATREAYGLNNV KTEQYQATTEGEAGALADSAESTAQIRLLDPQIVSPTFKQLQQSKQYYTFADTLAVDKYE VDGVSQDTVIAARELDLAGLDNRNWVNDHTVYTHGYGVVAAYGNKVTADGQPKFFEAGIP TQGKLTESEQYEPRIYFSPNASEYSIVGAPEGTQSWEFDYPTGSEGATNTFGGNGGPKIG NIFSRLLYAIRFGSDQILFSNRVNSESQILYDRSPKERVAKVAPYLTLDGRVYPAVVDGR VKWIVDGYTTSDAYPYSQMTDLGEASKDSTTESSATVSELASKNANYIRNSVKATVDAYD GSVDLYVWDESDPVIKAWQKIFPGQYHQLSEISGDLMSHLRYPESLFKVQRELLTKYHVS SASQFFSGEDFWQTPVDPTESQQAQERDILQPPYYLTLQTGGSNEPVFSLTSSYIPAGTS TREILTGFLSVDSDAGHEKGKIGANYGTLRLQELPKDSNVPGPGQAQNNFNASADVSKEL NLLESGSTNVQRGNLLTLPLGGGLVYVQPVYVKSSGSTSFPLLKKVLVAFGDQVGFANTL DEALDQVFGGNSGASAGDAENVDGSTSGKTDTSDTNGDASTDGSSGTDGTDSSSGTDSGN DSSSGNTGSSSGTMSNGLKSALNDASQAMKDSDAAMKKGDWSAYGEAQKKLQEALNKALE LEQ >gi|222441570|gb|ABXX02000003.1| GENE 36 41891 - 42430 481 179 aa, chain + ## HITS:1 COG:sll1647 KEGG:ns NR:ns ## COG: sll1647 COG1247 # Protein_GI_number: 16329646 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Synechocystis # 16 172 9 161 172 94 34.0 1e-19 MHMPGMLKNMIEYSYRIATQNDIQAITDIYNAAVIRGGSSADITPRTYEQRKAWVESHHD PYAVFVTETVDDDGERRIIGFSALSVFYDRAGYDGVTDLAYYIDPQWQGRGVGTYTLTKL LEECRKRNMRKACGIIFADNAGSIALMKRFGFTQFGLMPTAATDSTGTMRDMSYWYLDL >gi|222441570|gb|ABXX02000003.1| GENE 37 42518 - 43117 645 199 aa, chain + ## HITS:1 COG:CAC3217 KEGG:ns NR:ns ## COG: CAC3217 COG0193 # Protein_GI_number: 15896464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Clostridium acetobutylicum # 6 198 2 184 187 156 43.0 3e-38 MASDFWLIAGLGNPGSKYEGTRHNMGFMAADLLAERWSVNFSDHKGLAMLGKGVMNLSGR NVKFFLAKPLTYMNESGNALASISAYYQIEPDHIVVIHDDMDLDFGRIKVKAGGSAGGHN GIKSIDRALGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADA AETIIFNGLAKAQEQFNGR >gi|222441570|gb|ABXX02000003.1| GENE 38 43107 - 46655 3109 1182 aa, chain + ## HITS:1 COG:MT1048 KEGG:ns NR:ns ## COG: MT1048 COG1197 # Protein_GI_number: 15840448 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 14 1178 13 1206 1234 1051 50.0 0 MAAEPVQLPTSGSLAGILDVLETDEDFRALISDEIEVPESDIDPSITVGVPEGLRPALAA GAAGTRPVVLVVASGREAEEMVEAIRSWYSGDPNDVAQLEAWETLPHERLSPRADTVASR MAVFRRLMHPQEGSKLFGPIRILVMPVRSLIQPVVAGLGDVEPLVFSQGEELALDEASHR LVENAYTRVDLVMDRGEFAVRGGIIDVFPPTLPHPVRIEFFGDEIDTIKEFHASDQRTYG SDIPMVWATPCRELQLTEKVRVRAKSLIGSIPNAEDMLESIANAIPVEGMESLLPALVDD MEPVQGMLPKRALVMLSDPEKLRRAADDLAKTANEFLAASWHVAASGHGAGAPITFDQAN FYDFEETISSLVFSRHDVWKLTSFGVNSSREGRVQLDATNPGEYRGDEAKTASGIEGLLD AGYAVTVTAGAQGTLVRLKRAINETGIANFDCIRSRAIDGFVDNAAKVALLTERDLTGRT SAAGQAKTPKRRRKAIDLMELKAGDYVVHEQHGIGRFLEMRQRTIGAGANQTTREYLVIE YASSKRGAPADKLFIPTDQLDQVSKYIGADAPKLNKLGGSDWAATKAKARKHVHEIAEDL VKLYSARQRMQGYAFSKDTPWQKELEDAFPYQETADQLTTIDEVKSDMEKPVPMDRLICG DVGFGKTEIAVRAAFKAVQDSKQVAVLVPTTLLVQQHFETFTERFEGFPVEVRAMSRFQT TKEINDTIEGLEDGSVDVVIGTHKLLGPKVKFKDLGLVIIDEEQRFGVEHKETLKALRTN VDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAVRRELLR GGQVFYVHNRVQDIASVAAKIHELVPESHVGIAHGKMGEKQLDGVIRDFWHRDIDVLVCT TIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYAYFLYDPTKPMTQQSHD RLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEAVEQYKE PERTESVAVTIDLPIEASIPVSYIDSDKLRLEAYRKLAGARTEADLDELRDELTDRYGKP PVDFEALFDVARLRFKARKLGITEIIGQGRNVRVAKFEPRESVQMRMARIYKGIQYRPMT KTYLIPAPFAGSLGSGPMSSDEIVGWTNQLLDDLDWKPTPKK >gi|222441570|gb|ABXX02000003.1| GENE 39 46793 - 48091 1866 432 aa, chain + ## HITS:1 COG:Cgl0949 KEGG:ns NR:ns ## COG: Cgl0949 COG0148 # Protein_GI_number: 19552199 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Corynebacterium glutamicum # 1 423 1 420 425 490 61.0 1e-138 MAVIESVYARQILDSRGNPTVEVVLDTEDGAQGLGLVPSGASTGEAEAWERRDGDKSVYQ GKGVLNAVKAVNEEIAPKVIGMDASDQRALDEVMIELDGTPNKGRLGANAILGVSLAALY ASAESAGQPLYRYIGGTNGHILPVPNMNIMNGGAHADFATDIQEYMISPYGFDTYSEALR AGVEVYHTLKNVLKKEGLATGLGDEGGFAPKMKSNKDSLNYIMDAISAAGYEPGKQIGIS LDVASSEFYNKETGKYHFEGDDREAGYMLDFYENLINEYPIVSIEDPFQEEGWEDWAAIT AKLGDRLQFVGDDLLVTNPARLAKGIELGAANSLLVKLNQIGTVTETLDAIELATKNGFT SMVSHRSGETPDTTISDLAVAKNTGQIKTGAPARGERIAKYNRLLEIEEELGSTAQYAGY SAFKACKKYIAK >gi|222441570|gb|ABXX02000003.1| GENE 40 48170 - 48733 452 187 aa, chain + ## HITS:1 COG:no KEGG:BAD_0646 NR:ns ## KEGG: BAD_0646 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 159 1 158 182 210 78.0 2e-53 MSSKSRKKASRRGSAGPIAFFVAVFIVALGSIQLASTFHTYALNMAELNGLKKQEAALIA QKQELENDIARWDDKAYVTAQARDRLGFVFPGEQAIRVEHPEAVTGETTEDAKKTDESQK TVLPWYKEMAYSFKQADQSDEVKSKSRETSESTSTGESDANGTSQESGGQQQTSQDNNQQ QSGDQQE >gi|222441570|gb|ABXX02000003.1| GENE 41 48742 - 49308 664 188 aa, chain + ## HITS:1 COG:MT1053 KEGG:ns NR:ns ## COG: MT1053 COG1507 # Protein_GI_number: 15840453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 23 174 6 150 163 129 49.0 4e-30 MTISEQAKTLAKKVLDQPATEHDIAVVERQLGRYPRGMVAVGARCVCGRPLAVVTRPLLP GGVPFPTTCYLTGPEAVKAISHIEAEGKMKEYNDLLAEDDDLKAAYERAHELYLAFRHEI AVAMEDSEEHIEGTSAGGMPVRIKCLHALLAQTLVMGEGANPIGDMALEAIRHEFDPNVC RCTVENED >gi|222441570|gb|ABXX02000003.1| GENE 42 49336 - 50331 1094 331 aa, chain + ## HITS:1 COG:MT1054 KEGG:ns NR:ns ## COG: MT1054 COG0248 # Protein_GI_number: 15840454 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 1 321 1 315 319 209 42.0 5e-54 MKSVTVAGIDCGTNSIRLKVSRVSEDGVEDIVPRILRVIRLGQDVDKTHRFADEALERAY AAAREFAEVLKKHPVDGVRFVATSATRDAENREEFEDTIEQILGVRPEVIPGTEEADLSF LGATSVVRRDVEAPYLVVDLGGGSTELVLGGDGVSHPNMQVQAAFSMNIGSVRMTERHLK NDPPTEAQIQEAIADIDEHIDEAFKTVPAGKTRTIIGVSGTVTTMTALAMGLTEYDHSAV DGASCSLEDAYAVDNKFLTMPREERLTYKTIHPGRVDVVGGGALVWNRVLAKVSEAAYAD HGQHIDSFMASEHGLLDGIVLDYGTRLLAER >gi|222441570|gb|ABXX02000003.1| GENE 43 50555 - 51130 624 191 aa, chain + ## HITS:1 COG:no KEGG:BAD_0649 NR:ns ## KEGG: BAD_0649 # Name: not_defined # Def: Cd efflux system component # Organism: B.adolescentis # Pathway: not_defined # 1 191 1 191 191 261 83.0 1e-68 MTSKDIKPVIEQPDTEIPLMLSQAIIVAGVLAVGELACSPLYFSLLKASLALIPWAMEAV FMAVAFTFVVGFALLWCAESFTIKMRERFRPFAYAIVGLIGYGVWSLLVFSATINSVLAM VGESVLTNGQIGAIALNGAALGFVAFLFAKLLDVKLGNRKTTAIIMLVVEVTAAIIGLII MILMFRALYAA >gi|222441570|gb|ABXX02000003.1| GENE 44 51164 - 52624 1056 486 aa, chain + ## HITS:1 COG:RSp0045 KEGG:ns NR:ns ## COG: RSp0045 COG1760 # Protein_GI_number: 17548266 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Ralstonia solanacearum # 3 486 4 461 461 482 52.0 1e-136 MFSILEMFKIGVGPSSSHTVGPMVAACKFVESLEHTGTLGRVSRVRTVLYGSLALTGLGH GTDRATVAGLEGNMPQTVDTDHVNIIRHECESSGELLLAGKHRIDFDYAHDVVMDVWHRL AAHPNGMRFQAFDQQNNLVDEQVWYSIGGGFVRQGNAEDLMIGIHERPPIGTSFADQQSD SSLDDGSDVPYPFTSCDDLIALCEKHHMSIADIVWANETAMQSAVQVRSELDNVWRVMRR CVQHGCHTSQTVLPGGLNAPRRAPKMYARLASNSDVLARDKKRADAVLESSDAAWVDLFA LAVSEENAGGGRIVTAPTNGAAGIIPAVLHYYWHFVDHANEEGVITFLLTAGAVGYLFKR NASISGAEVGCQGEVGTACSMAAAGLCAVMGGTPQQVENAAEIGIEHNLGLTCDPVGGLV QIPCIERNAMAANTAINAVRMAMLGDGTHIVTLDQAIKTMKDTGEDMMSKYKETSKGGLA VNVVEC >gi|222441570|gb|ABXX02000003.1| GENE 45 52676 - 53083 546 135 aa, chain + ## HITS:1 COG:alr0577 KEGG:ns NR:ns ## COG: alr0577 COG0545 # Protein_GI_number: 17228073 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Nostoc sp. PCC 7120 # 21 135 53 165 165 84 45.0 5e-17 MASQMPVVNVEFGDRPTIEFPSETAPAGLKVVELLEGNGPMVRRGDTVTVNYHGVVWGKD TPFDSSFDRHQPASFGIGVGQVIKGWDQTVPGHNVGSRLVVSIPPEYGYGSRGVPQAGIG GEDTLVFVIDIISTR >gi|222441570|gb|ABXX02000003.1| GENE 46 53126 - 53605 656 159 aa, chain + ## HITS:1 COG:MT1111 KEGG:ns NR:ns ## COG: MT1111 COG0782 # Protein_GI_number: 15840516 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycobacterium tuberculosis CDC1551 # 1 157 1 161 164 90 39.0 1e-18 MAEEKTLLLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRV NQGRIEELTVKLRNAKILTAPKAGEVGDGSLVTLDVNGREMVYVLGTRDLSIATDYSIIS PESPIGAAINGAHEGDTVSYTAPNGREISVTIKEAKPLA >gi|222441570|gb|ABXX02000003.1| GENE 47 53731 - 54672 867 313 aa, chain - ## HITS:1 COG:ECU06g1500 KEGG:ns NR:ns ## COG: ECU06g1500 COG1272 # Protein_GI_number: 19074401 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Encephalitozoon_cuniculi # 100 304 2 207 218 122 33.0 1e-27 MSYGNVGYGSVTYSGGTQMAKPTDVEIEEKRAIIAEAREQALQAKADIIRVKARNKAENI RKKADGKAKMAIAKGEARAAKIEGITPTEIERKIRLDVHGRPKPAMRGWIHAVATPLALA AGIVLICLAHGTGLKWACAVFMTCSLVLFGNSACYHLGDWSPRVTDVLRRIDHMNIFLLI AGTYTPVSFALEPFWRNSIIAGMWICTTVALIIHVIWISAPRWLYVIVYIIFGVSGVAFM GLFWISPYAGPAVVVLLAAGGACYIAGAIVYALRKPDPWPKVFGFHEIFHCGTVAGYACH MVAIYMVIVQLWP >gi|222441570|gb|ABXX02000003.1| GENE 48 54733 - 56238 1382 501 aa, chain + ## HITS:1 COG:MT3316 KEGG:ns NR:ns ## COG: MT3316 COG3920 # Protein_GI_number: 15842807 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 28 491 22 489 501 277 38.0 3e-74 MRMMERMADFSHILTTRPDFDDEDREWLHHLVADWQVIADLSFADLLLILQNGEGKYIIA EQCRPSTVMSLRADDVVGDVVEEEMSAELDAAMASESVFRSTVLRTVGESTVCNVYAPVR HNGKTLGLVVRETNMATRESNGRYESESISAGKQLYEMIPRGQFPYRNPIMNQRHNARVA DGFIVLTVEGIVRYASPNAISCFRRLGSVSTMQGEYLSEIGTKLLRENDPVLETLPLVLS GKAAVDSELDANKSAVSMRSLPLMDANGRVGAVVLCRDVTELRRREKELQTKDATISEIH HRVKNNLQAVSALLRLQARKTKSEEVKKELKEAQRRVQTIAMVHEGLSQTADEIVDYDKV ISSLLKMAVDLATMRDQHIDIDFIGRFGMMPAQDATPLSLVLTELITNSVEHGFEGRKEG HITISVGRGGNNLNVVVEDDGTGLANEEHDGMARSSGSGLGTQIISTFVNNDFGGTVRWE PRRGGGTRVVLDMKLRAAQER >gi|222441570|gb|ABXX02000003.1| GENE 49 56341 - 56619 410 92 aa, chain - ## HITS:1 COG:no KEGG:BLJ_0697 NR:ns ## KEGG: BLJ_0697 # Name: not_defined # Def: transcription factor WhiB # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 92 1 92 92 165 100.0 6e-40 MSSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQD YGVWGGLSEDERRALKRRAMRARRSQAMQMQI >gi|222441570|gb|ABXX02000003.1| GENE 50 56725 - 58500 1236 591 aa, chain - ## HITS:1 COG:CAC0408_2 KEGG:ns NR:ns ## COG: CAC0408_2 COG1674 # Protein_GI_number: 15893699 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 130 391 440 722 1312 172 37.0 2e-42 MAGMKGKNKRKHTDGFNEDRLMLISWSAPVLAQLVMLVIMSAQRQWLYVAMLAPGLISSA LSLASMALRSNQKQQHDEPVSTTYAKVVETARQNSHSPFAAMPHMCFERFYALDEDALPW RTITRTWLSSTSSCPIGVTEHGLFRTDLQRSGPHAMVAGTTGSGKSELLISWCLSLAMQY SPDDLHFVFLDFKGGSTFNALEHLPHTVGNVCDLDLFHAIRALNAIEQELVRREALVSAE RVSRFDQLVRPPARLVVVIDEFHALRDRLPDYMQRLNRLASLGRSLGMHLIVCTQYPMGQ VHADMKANISLSICLRVTDQMQSNELIGIRDAALIPPSIPGAAYCNDGQHTTPFLCSAVR DVNRLVRNIGTAARFHACKRPDLLFSEPLTQHATQSDLSIPSNQSWHNVPFALADDGVLV YTAILDVSQQNIAIIGAYGSGKTNLLLHCARWLYDTGCANIRFTRKTEHGMVTDDGKPLP SHKRTIWIVDDADEALNPFSSAPEANELREALVNPNITVIAAVEKPISALLDRCPTRVAF PCGERSNDLMLGIPGAILDGFAADDYTLPGRGVLMQQAKACPIQCVEFQGF >gi|222441570|gb|ABXX02000003.1| GENE 51 58585 - 59526 941 313 aa, chain - ## HITS:1 COG:Cgl2840 KEGG:ns NR:ns ## COG: Cgl2840 COG1316 # Protein_GI_number: 19554090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 13 295 1 287 288 155 36.0 8e-38 MGRVILAFFLAVILALGLSIFSAWNWVDGQLNKQSWLTNKADTAGESWLILGSDEREGTV GDAGDVTGFRTDTILVLTKPKSGPSSLISIPRDSLVEIDQSYMKINAVAQLYNGKQLVNE VEDITGQKINHVAMVQFGGLVKVVDALGGVELCYDQDVSDPYSQLNWTAGCHTADGTTAL AFSRMRYADAQGDFGRAARQRQVINAIVKKGASKDTLLNFGKVKKVAEAALSSVTVDEKA STSSLMRMALAFKSASGDQGISGSVYWTDPDYYVDGVGSSVLLDEEKNLELFSELAKGTH RAGTVGTLAEQQG >gi|222441570|gb|ABXX02000003.1| GENE 52 59513 - 59671 114 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRPICRFLWGSTAFAVDWNPVVLLPDKGCLGVFCRVVRGMPVGMEEDPRTC >gi|222441570|gb|ABXX02000003.1| GENE 53 59712 - 59966 76 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351857|ref|ZP_03742880.1| ## NR: gi|225351857|ref|ZP_03742880.1| hypothetical protein BIFPSEUDO_03459 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03459 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 84 31 114 114 147 100.0 2e-34 MQETMMPTYVVCWWSLRQDGNSVERWNRMELRMMVALYACWRAGHLSALAVRQAKNLELT ESRIEKELWICEAVIPSSSVLRTG >gi|222441570|gb|ABXX02000003.1| GENE 54 60089 - 61519 1335 476 aa, chain - ## HITS:1 COG:MT0844 KEGG:ns NR:ns ## COG: MT0844 COG1316 # Protein_GI_number: 15840235 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 81 383 206 524 684 94 26.0 6e-19 MTTSPAGDKLPNVNGLRDAKPRHSLGYRVQHRARTIVASVIAAMLVFSGTAAAATWLDVN GIIKDHSVEIIGQGSLDANTSIIDPNSGKPIEFVLIGQDSRDGEENQSVGGNFDDVVGNH QADTTMVAQISADRTKINLVSIPRDSLVDIPQCETTNGTIPAQYNVMFNSIFANAYQTGG DLASAASCTLNAVNSLTGLNIQNFIVVDFAGLVKMINAVGGVDLCIPQDVDDPYTSLQLT KGLHHLDGHQATQYARTRHGLGDGSDTSRTTRQQYLIKQLMNEALSKNLFTDTAQLYQLA KSALQSLYISQGMADTAALAGLAMSLKDFNLSSLYSQTVPVVSAPSDPNRSVWTDEAETL WEKMRADKPIYGSDESDANTDANTAGNSDGSSDNSTDGTDNTDNTGTDNTGSQEAAPTPD PVTGLITQADGTLIDPNTGGTVDPEDGSIHDALTGQYIGLADRYLNATVCAVPAKN >gi|222441570|gb|ABXX02000003.1| GENE 55 61684 - 61872 103 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLPGNIIIAFEQTPQFRKRIIGGLVDHAPHASSPAIRMRTFSRVKLHTCNFFLSSFPPCQ SL >gi|222441570|gb|ABXX02000003.1| GENE 56 61783 - 62082 476 99 aa, chain + ## HITS:1 COG:no KEGG:BAD_0659 NR:ns ## KEGG: BAD_0659 # Name: whiB2 # Def: WhiB-type transcription regulator # Organism: B.adolescentis # Pathway: not_defined # 1 99 1 99 99 171 93.0 1e-41 MWGVIDESSDNPLAELWGLFKSDDDVSWQHRALCSQTDPEAFFPEKGGSTRDAKRVCAQC EVREQCLKWAIEHDERFGIWGGMSERERRRYKKEHKERA >gi|222441570|gb|ABXX02000003.1| GENE 57 62116 - 65217 2537 1033 aa, chain + ## HITS:1 COG:no KEGG:BAD_0660 NR:ns ## KEGG: BAD_0660 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 1033 1 1034 1034 1457 74.0 0 MNSNASSDIQGIVTDLLNSRPYSHRQDADSSVAAVITAQSDLRFFSSTFAAVLAQRVLPG TIIVADCTNQVEQPMQMTFSVIPSPAGVLTEVPESKTIRVILVGVKGASSFMNAVARAMQ QIDLDDRVGALWTLHDDSRPADESCLEVLLDAWKNTPTASLLGAKQLDWQAESLHNVGLY AGHHNVTSLVVDGEPDQEQYDGRQDVLAVSLSGALVPLATLRTWKGADPWFGTFAESTDL CRRICLGGGRVVVVPQARIAHRRARFEGVRSKNGQPVEDEEGRVDPYLAVREANTKYAYT DVHRSWWPLLWIWSILKALGLAVLCLTRKQPYHACCELALPWRSLLHLPGAWRARARLRE QSRVSLKALAALQTTRQQIGQWNDRKRAFLDQRGTVILSPLAKAHLRKRLMRRWGLAIAS AVIAFAWIVFLYWNVLRSVFSGASIYSQTLLPTDASFSQLVHAATTSWAYTAGTGISAPS APWLLVLMVVSVFTAGHVATAVAVVFFLSAPLMVLSFWALAGIFTRSDTVRCVIALAWFA IALSMNVYSDADVTMMTVMVFLPAAFAFSFRAVGMYRTEDLVNPQASVQAAALAALCFIP VVAAEPQLLLPLMLSFLVFLMLVRSHRTTLLLIPLPAASVCAPTLVNTVRFAGAGTWRQI FGSVILPSSAHDGHPMIANLSDIVSRAFGVAVSGEIWQYVAAAMLALIVLLAAVSLFLPF VLRVSRMMWVVAIAGLATSLLSAAVVVAVDADGAVAGSVLPGVSFTMMGLLSCVCMVAGG AVQRFVMLWQRPTGDVEVERNGASTGIIAGRAARIVLVMLIAASVVASAGFDYVARDHNT VSTSDSGLPIVASDYLAQDEARRVLAVRADSAGSISYNVMRTRRGDLIDSSPAQRVEVAF GRSDDANKAIAKDCAQLLSNADSDAVADLSELGFGGIYVVRSGEDKAQKEITDQLSSNIS ASDGTQNVVSTDAGTYYRLTIQDTAKQHIDRKGYRQAESSVWRQAWLWCMGIVLAAYCLV ALPRMRRHGQEEA >gi|222441570|gb|ABXX02000003.1| GENE 58 65214 - 66746 1093 510 aa, chain + ## HITS:1 COG:no KEGG:BAD_0661 NR:ns ## KEGG: BAD_0661 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 510 1 509 509 577 68.0 1e-163 MSKHSRSKTVWRVILAIVSVLVIVALATVAVIYRPTWIHADSPVTQRSSVSRTVSPRQLE TYCPARMTIADTDVYGDSEYQASNGNIMSSARYASFGSVFRSSVGLLGADEATSSLVLNK DDAGSDDDIFMASGTVDDGAQLQNTRLLSASDGTGAASSVMSWATEGDLKGVSAASCVVP ALKQSLMVSGTKTGMTQQLVVANPSAKATSVNIKVWGSDKSGALALSTGSTLTVGAGKES VLNLAAAASGQDALYVTVSSVDTPVAAVVRTIAMDGLVAKGSDYAVPNTVAAKTLAIDGL TEGDAVNLYVYPSRQADVTVSWTDDQGLKKTNQQTLESNRVSVIDLGSVPKSATGLTISA SEPVSVAAKITNDGDDDQADFALVNASVPMSVSAMAVPDHATAQVGITNISGDERTATLT SYNSVGDTVDQREIALQSGASTTVDLADINDGDVAAVSFADPDQSMVWNIRISQKDVSDA KLAGVSIIGATDLKEAREQVLANQNMTVVR >gi|222441570|gb|ABXX02000003.1| GENE 59 66747 - 67067 286 106 aa, chain - ## HITS:1 COG:no KEGG:BDP_0888 NR:ns ## KEGG: BDP_0888 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 106 28 133 133 183 91.0 2e-45 MFDDMLVAQIRRLNDAWPELVAPVQFAVEDVPPSDPAPWEATAHLGSQSFPAEHGIPPRV VLYRMPLQSHARSRMDLQFAIRDEVVLRLAELYGRRPEEIDPDWGM >gi|222441570|gb|ABXX02000003.1| GENE 60 67254 - 68060 647 268 aa, chain + ## HITS:1 COG:L165449 KEGG:ns NR:ns ## COG: L165449 COG0561 # Protein_GI_number: 15672552 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 22 264 3 248 252 148 33.0 9e-36 MTDISVPCWNDVDIEELCNGVRLIAFDLDNTLARSKKPMKDDMAECFSALTSLIDVAVIT GGKYALLKSQVVERLTGQANRSHLHLMPTSGTRYYRWGGSDWAPVFAHDLSADDRAKAYE SLERNAREQGIWLTHVWGERIEDRGSQITFSALGQLAPIEAKEAWDPTNEKKNRLARAVA ADLPHLEVRPGGASSVDISEKNVDKSFAVRELADILGITVAQIVFVGDRMDPDGNDYPAA KAGTRAVKVTCPNDTVKLCGGIIASLSR >gi|222441570|gb|ABXX02000003.1| GENE 61 68108 - 68830 186 240 aa, chain + ## HITS:1 COG:MT3340 KEGG:ns NR:ns ## COG: MT3340 COG1040 # Protein_GI_number: 15842831 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 2 209 29 229 241 60 33.0 2e-09 MVVNLLFPRGCAGCDKPDEVLCEACRALFSQPTAQSFDGVAMQRWFACGWYRGTVRKAVL AWKDHGDEECDRAFADAICALAKASGVIDFVRDRHGSCHDVVVVPAPSSPASIRRRGRKH MMPIAKHLAGFLREETGCEVTVRDALENRGVKGKSVQTSGAAQRSQRLKGHVSVRPSVSL RNTMVILVDDIVTTGATMRSCVETMRKEGATVVTVLALAHTPAGTQKVGPTQAWSRTQVQ >gi|222441570|gb|ABXX02000003.1| GENE 62 68844 - 69920 883 358 aa, chain - ## HITS:1 COG:RSp1162 KEGG:ns NR:ns ## COG: RSp1162 COG0642 # Protein_GI_number: 17549383 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 48 343 196 491 512 160 32.0 4e-39 MRTTDTKPGRSVNPLETERPIGLFSSLKIELSVLITISTAIAFIMAWFLLKVGLSVWIAM PITLAVALGITYFFSRGLTSPLRQMRDAAEAMAEGDYTVRVHVDSNSRDEVGQLALTFNE MAEELQHADQMRRDMVANVSHELRTPVSALQAMVENMADGVIDPTPSNLESILNQTHRLS DLIAFLLDLSRMEAGAASLQIEMFNFADFLDETVEPLEIADAGHAHDIEMHVPDDIEMAG DQDRLRQLFTNIIANALKHSADNTTVLIEAHENKDFGTIVTNVVNFGSQIPQEARSDIFR RFVKGKTGPGTESGGTGLGLSIARWAAQLHGGSVRVVDDPRGADFEIILPKYHVTDDE >gi|222441570|gb|ABXX02000003.1| GENE 63 69940 - 70668 778 242 aa, chain - ## HITS:1 COG:BH3157 KEGG:ns NR:ns ## COG: BH3157 COG0745 # Protein_GI_number: 15615719 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 15 242 5 239 239 184 44.0 9e-47 MLNSSAQPTTAPRTVLVVEDEPTLATAIAQRITAEGWTARVASDGASAVQAATTLRPDLV IMDIMLPVMDGLEATKRIVAERPVPVLILTARDDEADKVIGLGAGADDYMTKPFSMRELI ARCKALLRRVDRAKVIAKNSENEKLLDFGSLVIDPAQRIVTVNGKQVHLTPTEFDLLATL ARKPKSVLTREKLLEEVWDWVDASGTRTVDSHVKALRHKLGSKTIRTVHGVGYAFEPPEV QD >gi|222441570|gb|ABXX02000003.1| GENE 64 70684 - 72939 2398 751 aa, chain - ## HITS:1 COG:Rv1326c KEGG:ns NR:ns ## COG: Rv1326c COG0296 # Protein_GI_number: 15608466 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Mycobacterium tuberculosis H37Rv # 27 749 25 730 731 766 53.0 0 MATESKINEDVVAVPVPQGTLDAVSNGTFYNPHEVLGGHLGSGKHADVVTIRVLRPLAKS VTIITEQGQTLAIHEYNGVFMALVPAAAAEEGYGVPDYRIRTEYEDGSVVVSDDPYRYLP TIGEMDMYLFGEGRHERLWEALGAHVLRYDDPMGSSEGVDGEQVVGTAFTVWAPNAHAVR VVGDFNGWNGRTHAMRELGSSGIWELFIPGIEAGEIYKYEILNANNEWTMKADPMERSHE IPPRTGSIVVESTHEWDDADWMAERAASDPHNGPVSIYEVNASSWRKDVNDYRELADKLV PYVQKEGFTHVEFMPLAEHPFAGSWGYQVTGYYAIDSRLGGPDDFKYLVEKLHEAGIGVI MDWVPAHFPKDAFALGRFDGTPLYEDPDPTRGEHPDWGTYVFNFGRREVRNFLVANACFW LDEFHIDALRVDAVSSMLYLDYSREAGQWHPNIYGGRENLEAIDFLKEANATAYKNNPGI MMIAEESTAYPGITAPTDAGGLGFGLKWNMGWMHDTLQYLHEEPINRKWHHNEITFSMVY AYSEHYVLPISHDEVVYGKGSMFGKMPGNDWQKYAGVRALFAYQWAHPGKNLTFMGNEIA QYGEWDHDGSVDWAALEWPDHQGVQKLVADLNTLYKASPALWSQDFDPAGFQWLTSDDAD HNTLSFVRIGKDGEQMVVVVNFSGEAWTDYQVPLTKGGKWTEVLTTDDEIYGGSGIHNGT VEAIEGEYHSRDWSAKITVPALGAVFLKPEL >gi|222441570|gb|ABXX02000003.1| GENE 65 73077 - 73673 691 198 aa, chain + ## HITS:1 COG:MT3689 KEGG:ns NR:ns ## COG: MT3689 COG1329 # Protein_GI_number: 15843196 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium tuberculosis CDC1551 # 1 157 1 155 162 161 59.0 9e-40 MGYKVGDMVVYPRHGAAKVEAITERTVKGITREYLQLSVLSSDGLVINVPVDNAKKVGVR DIVDANEVAKVFEILRTPIIEKEMNWSRRYKLNVEKIATGDVNKIAEVVRDLAQRDVDEH GLSAGEKRMLTKARSILTSEISLSEHLDEAEAQRLLDVNLGYEPAQPGDEEHHTEAPEEA AMDTLARVEAESKKSKKR >gi|222441570|gb|ABXX02000003.1| GENE 66 73682 - 74179 430 165 aa, chain + ## HITS:1 COG:ML0322 KEGG:ns NR:ns ## COG: ML0322 COG0245 # Protein_GI_number: 15827086 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Mycobacterium leprae # 2 157 6 158 158 132 54.0 4e-31 MRIGQGFDAHRFASHDAGKPLWLACLRWEGDGIEGDSDGDVAAHALIDALLSAAGLGDIG TLFGVGSQSDGAGKHGAEMLRTTVDYLNERGMKPVSASVVVIANRPKIGKHREEAERALS EAIGCEVSMTATTTDGMGFTGSGEGVAAIADALVEPVDPSTRQAV >gi|222441570|gb|ABXX02000003.1| GENE 67 74216 - 75052 934 278 aa, chain - ## HITS:1 COG:ML0335 KEGG:ns NR:ns ## COG: ML0335 COG1108 # Protein_GI_number: 15827091 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Mycobacterium leprae # 38 266 44 272 286 105 36.0 1e-22 MDGTVFAFDPDWVSTLNAPFMTNAFLAGLCIALAAGVMGYFTIARHSTFAAHALAHIGLP GATGAVLLGLPVSAGLGVFALGGALVIGALGKKASQREIATGTVLAFATGLGLFFARMSS SASQQMQSILFGSILTITDGQIIGFAIFDVLLLAVLAVIYRPLLFSSLDEQVAQAKGVPV GFMNICFMTIMAGVITIAVPAVGTLLIFALAITPAATANIIARSPFKAMVVATVICLISI WGGLVISAMFPAPPSFIIVTISTLFWAVAKAIESFKRK >gi|222441570|gb|ABXX02000003.1| GENE 68 75055 - 75918 863 287 aa, chain - ## HITS:1 COG:ML0336 KEGG:ns NR:ns ## COG: ML0336 COG1121 # Protein_GI_number: 15827092 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Mycobacterium leprae # 3 245 17 263 275 145 35.0 7e-35 MHDETPACIEFDDACVKRGGHVIWQHGTFSIPQGSVTAIVGTNGAGKTTMMKAELGLIPT AHGSIKVLGQPAGSANRRIGYVPQSYASDIESNITAEQSVLLGLTGTRFGIHPVTKTLRE KARKAMDFVELQDKANYRLSELSGGLRQRVAIAQALVDDPKLLMLDEPLANLDLASQRAT VHVLAKLNRELGMTIQVVAHDLNMLLPILTGAVYLLDGHPHYAGMNEVLDSHLLTHLYGT TVQVVTTPQGDMFVTPSEDESENMSIDAHAPEEIAQFHHHSHTTQED >gi|222441570|gb|ABXX02000003.1| GENE 69 76145 - 77233 862 362 aa, chain - ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 61 290 111 345 511 117 27.0 2e-26 MRLHKRSLLRAFAAGIALCVAFGTAACSGGSTSQENDASADSETPTEQITPIEVVASVNQ WGSLAEQIGGVHVKVTSVLSSTDVNAHDFEPKTDDIDKLQQAQVVVSNGAGYDTWATKNL SKTMVSVSAAQMVGAVEGDNPHLWFSSDARNAMAKELADTYSRIMPAQKKYFNNKLTAWN RREKKIEKDMKAFSDSHKNVSYAATEPVAYYLLSDMGFTDNTPEGYLQSSSTNSEPTPTD LQEFQELLEKHKVEVLINDTQSTSDATNTLTGIAYKSDVPVLDISEQMPSDYTSLTSWIR ALILSLTDMFDEQFDADDQDATSSDSTSENADSLESTADSSTQDNDQTTNGSNDAPQPNP VK >gi|222441570|gb|ABXX02000003.1| GENE 70 77374 - 78249 954 291 aa, chain + ## HITS:1 COG:Cgl0629 KEGG:ns NR:ns ## COG: Cgl0629 COG0190 # Protein_GI_number: 19551879 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Corynebacterium glutamicum # 2 289 3 280 284 306 55.0 3e-83 MAVKIDGKMVSAQIKANLAERVAALKEQGVNPGLGTILVGSDAGSVKYVAGKHADCAEIG VNSIKKELPADATFEQIAEVVQELNADPACTGYIVQLPLPKGIDENAIIDLIDPKKDADG MHPYNLGELVLHARGEITTPLPCTPRGVIELLKAYDIDLDGKEVCVLGRGITIGRTIGLM LTRKAVNATVTLCHTGTKDVRKHMREADIIVAAMGSAGFVKPEDIKEGAVLVDVGVSRVF DEGVGRYRVKGDVDKACYEKALAYTPNPGGVGPMTRAMLLENVVEMAERQL >gi|222441570|gb|ABXX02000003.1| GENE 71 78417 - 79892 2459 491 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025692|ref|YP_909537.1| 30S ribosomal protein S1 [Bifidobacterium adolescentis ATCC 15703] # 1 491 1 490 490 951 99 0.0 MAENNNEVAKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKVDHDEVLLDIGYKTE GVIPSRELSIKKDVDPDEVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK EADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQTIKAKILELDKNR NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQIVKGK VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKPGEEVFVKVIDVDLDRRRISL SLKQANDSVDPASEDFDPALYGMPAEYDEQGNYKYPEGFDPATNEWIAGYEKQREEWESQ YATAHDLWEQHKEFVAKELENAEASAAEDGQAPKEEKVEEVSSNYSSENTSAGTLADSDQ LAALRDQLLGK >gi|222441570|gb|ABXX02000003.1| GENE 72 80014 - 80646 324 210 aa, chain + ## HITS:1 COG:Rv1631_1 KEGG:ns NR:ns ## COG: Rv1631_1 COG0237 # Protein_GI_number: 15608769 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis H37Rv # 5 194 1 182 230 115 40.0 4e-26 MAVVVIRIGLTGGIAAGKSTVSARLRELGAVLVDYDLLARQVVEPGSIGLQRIVECFGSD ALTDRGELNRAWMAEHVFSGADAERKRKMLDEIEHPLIYELAVQLEHEAVEVDCQAVVVH DIPLLAEVIDSIPFEFDHIVTVEAPEQVRVSRMMSTRGMSESQAWNRVNHQSSVEQRLAI ADEIIDSTQSLEQMFEHIDMLMQQWRTEAR >gi|222441570|gb|ABXX02000003.1| GENE 73 80649 - 82760 2033 703 aa, chain + ## HITS:1 COG:MT1669 KEGG:ns NR:ns ## COG: MT1669 COG0556 # Protein_GI_number: 15841088 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Mycobacterium tuberculosis CDC1551 # 5 701 41 736 739 899 68.0 0 MGFNIERTNKPFVVKSPYKPSGDQPKAIEELAERIENGENDVVLMGATGTGKTATTAWLI ERLQRPTLIIEPNKTLAAQLCAEFRELMPDNAVSYFVSYYDYYQPEAYIPQTDTYIEKDS NINDDVERLRHAATANLLTRRDCVVVATVSCIYGLGTPEEYAGRMLFLEEGQQIDRDDLL RTFVAMQYKRNDIAFTRGTFRVRGDTVEIIPVYEELAIRIEFFGDEIDRISTLHPLTGDV IGRQSQVHIFPASHYVAGPQRMERALSTIQQELDQRTAELRKQGKELEAQRLTMRTTYDL EMLSQVGVCSGVENYSRHFDGREPGTPPHTLLDFFPDDFLLVIDESHVTVPQIGAMYEGD ASRKRTLVEHGFRLPSAMDNRPLKWPEFLERVGQTVYLSATPGDYELGLSDGVVEQIIRP TGLVDPQIDVRPVDGQIDDLLAEIKDRVARNERALVTTLTKKMAEDLTDYLLERGIKVEY LHSDVDTLRRVELLRELREGKIDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSYRSL IQTIGRAARNVSGTVIMYADDITEAMHKAIDETNRRRDIQIAYNKEHGIDPKPLIKKISD VNDMLAKEDVDTQTLLGTGYRNEGKAGNSHLGVPATSKEESDRRHEEILKAGLPAQDLAD LIRQLSEQMRAAAEQLQFELAARLRDEIRDLKKELRQMTEASK >gi|222441570|gb|ABXX02000003.1| GENE 74 82799 - 83782 1187 327 aa, chain + ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 3 323 2 329 369 263 46.0 4e-70 MAETPLVFEIATFAVLAVFFVVDLFIIGRKPHVPSTKECVQHIAFFVVMALIFGGLMWFF AGSKPAIEFYSGWLTEYSLSIDNLFVFVIIMSNFAVPKQLQKFVLSIGITIALVLRGVFI LIGAAIISRFTWVFFLFGAFLIVTAIKLVTGGDEDEEYHENGLIRALRKVIKITDEYDGE KLRTVKNGAKYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFIVFTSNVFALLGLQQ LYFLLGELLDKLVYLPLGLSVVLGFIGVKLIMEALHGNSLPFINGGQPIAWVPEVPTWLS LAVIVVAIGGAALASVLKMRAIEAKEK >gi|222441570|gb|ABXX02000003.1| GENE 75 83955 - 85397 2051 480 aa, chain + ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 2 477 5 469 477 415 50.0 1e-115 MRKAKIVDTIGPATESLEGITSLVEAGMDVARLNRSHGTPEDHLKVYNNLRAAAKATGRN VAALVDLQGPKIRCGWFKKNADGEDKVQLTEGQEFVITTDDIEGDEHITSTTFKGLPGDC HAGDPILIDDGKVRLEVTKVEGNNVYTKVVVAGPVSSHKGINLPGVAVSLPALTEKDEAD LRWAIRTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPVVAKIEKPQALENLEEIVKAFD GIMVARGDMAVECPLEEVPLATKRCIELARQYAKPVIVATEVLGSMVNSPVPTRAEASDC ANAILDGADATMTSNETAVGKYPAVTVSTMSRISSFATEHGFDRIPELKNLDMSSTGAVS SAAVDLADKLNAKAIVAYTQTGSTVHRVSRERPATPIYGITNNEHTYHWLALSWGTESFL LDEDYHDKSRKDLMIFTDKILKDAGKVTDGDKIVVLSSAQGEHQPGRTDSIYVHTVGACD >gi|222441570|gb|ABXX02000003.1| GENE 76 85784 - 86020 83 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351880|ref|ZP_03742903.1| ## NR: gi|225351880|ref|ZP_03742903.1| hypothetical protein BIFPSEUDO_03483 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03483 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 78 1 78 78 138 100.0 1e-31 MSSFIETFSSVSLGQRSETKTSLIRINERHRRQEAHVEDHANPATMPGPSQSYSIWEKFA HPRCYRRRAGNTGDRLAI >gi|222441570|gb|ABXX02000003.1| GENE 77 85948 - 86175 109 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCLGILVSKRDLNPRRDTSTPLAWNRYQSASIGSRIISFLSHAGQPAEACDRCLPLLKLS VPCRLDSEAKQKPHL >gi|222441570|gb|ABXX02000003.1| GENE 78 86310 - 86543 103 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351881|ref|ZP_03742904.1| ## NR: gi|225351881|ref|ZP_03742904.1| hypothetical protein BIFPSEUDO_03484 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03484 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 77 1 77 77 152 100.0 9e-36 MHRFTPNYGIVATVTFTDNPEVFHIEFLQGIQWLPPVLLQSITMPKCPTAEDSFKEDLNR QIESWHDDWITAGEPWG >gi|222441570|gb|ABXX02000003.1| GENE 79 86729 - 87769 1029 346 aa, chain - ## HITS:1 COG:AF2273_1 KEGG:ns NR:ns ## COG: AF2273_1 COG1250 # Protein_GI_number: 11499854 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Archaeoglobus fulgidus # 18 312 7 294 406 194 37.0 2e-49 MEAPYEDCEVAMTDATVQTIEPKTLESIRTVANIGSGTMGHATALQFAVAGYPVKLVDCS EELLKRGMEHIRADAEEFAQAGLLRAEDTVDDVLSRISTYTDYENGVSDADFIIESIVEK LDVKQSVWQQIEQYAPVDAIFATNTSGLGPTAIQSVLKHPERFVVAHFWNPAHLMPLVEV VPGKDTAPEVVDTTFDLMASIGKKPAKIKKESLGFVGNRMQLALLREAFNIINEGIADAE TVDTVVRYSLGRRWNLVGPVASADLGGLDTFYNISTYLFKDMDNGTEPSLLLAWKVQDGN LGTKTGRGFYEWQGEDGQRIIRERDEQLMQQLAEDAAVEDADCKSE >gi|222441570|gb|ABXX02000003.1| GENE 80 87891 - 88757 577 288 aa, chain - ## HITS:1 COG:VC2001 KEGG:ns NR:ns ## COG: VC2001 COG0676 # Protein_GI_number: 15642003 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Vibrio cholerae # 10 262 29 266 296 133 31.0 5e-31 MSSTFTIRDIVNEDATASVSDYGAHVLSWAPAGEQAVVWRPKAIHLKEGTAIRGGVPIIF PWFNSGFEGGHVASKKPKHGFARNSFWHYDKEGSSDALLRYTLDSSEINADILSQFVSGP NPQFHAVYTIEVGCELTMSLTVYNDGDEPLSYEEALHTYLQVGDAEQSQVCGLEGTDYLD TVLDGDPRCSQGNEPVTFQGMVDRIYYSAHTLELRDPVLKRTVVVSKQGAAQTVVWNPGE QAGNAIGDLDEGEWRGFVCVEAVNNRDCAVVVPPHESHILQQTLSVRH >gi|222441570|gb|ABXX02000003.1| GENE 81 89090 - 89854 982 254 aa, chain + ## HITS:1 COG:MT1662 KEGG:ns NR:ns ## COG: MT1662 COG3707 # Protein_GI_number: 15841081 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium tuberculosis CDC1551 # 32 247 12 206 208 162 47.0 5e-40 MSAEKTTEPDEVLTDDELQAAAAPEQSIEEDDKPRKRTVVVAEDESVNRMDLVAMLEDSG YEVVGEAANGEEAVELTRKFRPSVVCMDVKMPRMDGIEAAGIICDENIAPVVMLTAFSQS DLVKKATGAGAMAYVTKPYEESKLLPALEVAMGRFAEINDLLDNVERSESKLHETEEQLK KAEEQLKKAEETLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKKRLAMAII AKYGDQKSEAEDER >gi|222441570|gb|ABXX02000003.1| GENE 82 90004 - 92697 2269 897 aa, chain + ## HITS:1 COG:MT1665_2 KEGG:ns NR:ns ## COG: MT1665_2 COG0749 # Protein_GI_number: 15841084 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mycobacterium tuberculosis CDC1551 # 380 897 84 592 592 452 51.0 1e-126 MLSQVIDAEHPDHLAVAFDVKGGTFRNTMLPQYKGTRDAAPEDLLTQLPLIQRMLTALGV TFIEKPGYEGDDVIGTLASMGDKAGYRTLVLSGDRDAFQLINDNITVLYPGHHFKDLKHM TPDAVVEKYHVTPEQYPDLAALRGETADNIPGVPGVGDGFAAKWINLYGGLDQIIEHADE IGGKKGEALRANIDQVKLNRSVNALVRDLDLGVSIEDLTFGQVDANQLNQLFTRLEFGIR TKNRVLRTFNAGKPTNDPVQQDESGKLEIPQYETVDSPEALEAWVRDNLPMPNGHLHDER EIAPKTTPSGFAIDHTKQCAQSVAHSWVLQVEGESKPGNAAYASLMIAAHDKAIRTNRVD RDMASQLQTVLDEHHQSMVVHGYKEQSHLLESVGVALPKPLFDTKLAGYLVHPDFHADTL EQAAAHFLDLHIEEQSEGATQGTLDFDEPDDSAQRNDNQLPRHTAIVGLLARKLADSLDQ REQFSLLESVEIPVSRVLYGMEHAGAQVDMNRLMSMREQLAADANYAQETAWQYAGERVN LQSPKQLQKILFEDMGLKPTKKTKTGSYTTNAAALQVLRDRSCGNDRACQFLDALLLHRE KNKLKQIVQTLIDATNRSDGRIHTTFEQTVAATGRLSSVDPNLQNIPNRDPAGREIRSAF VPGEGFESLLSSDYSQVELRIMADLSGDEALIEAFRSGRDFHKYVASLVYGVPVDEITPD QRSHVKAMSYGLAYGLSTYGLSQQLGIKPGEAESLKRQYFATFGKVHEYLESLVSSAREK GYTETIYGRRRYFPGLKSPNRAVRDAAERAALNAPIQGSAADIMKIAMIRADDALREAGL ASRIILQIHDELVVEVAPGEAERVTALVKDAMEHAVDMAVPLDVSTGIGSDWQLAAH >gi|222441570|gb|ABXX02000003.1| GENE 83 92762 - 93667 804 301 aa, chain + ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 5 222 4 216 258 110 27.0 5e-24 MATLKQVVDVLETLYPLRYAEQWDEPGLIVGDLRQPVRGIAFAADPSMAVVDQAIAGGVD LLVCHHPLFFRSVHAVSGLGFRGEIVRKLNLAGCALWVGHTNADAAYRGVGMAAADMFGL VDQRPLVPIDDPDAEHPVGLGRVGRLAEPVALRDFASRVAGALPYTELGVQVCGDLDVPV STVAVLPGSGDSLFDEVRAAGADVYVTSDLRHHPVTDAIEQARYEASMRASGVAMGHGDG RVRPAFVNTPHSAIESMWFQYAMEDVPHAVAEATGDIPAVRWISMNTDPWNMVFPSSGQE R >gi|222441570|gb|ABXX02000003.1| GENE 84 93674 - 94333 432 219 aa, chain + ## HITS:1 COG:TM1181 KEGG:ns NR:ns ## COG: TM1181 COG0494 # Protein_GI_number: 15643937 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Thermotoga maritima # 31 200 8 168 179 63 29.0 3e-10 MCDEAVDGTQVDVLLDESSDGVDMSGMVTVLDSRHVYQGAIFGVDDLRIALPMRDGGQTV IRRQVMRHAPCVVMLVHDCANDLYLIEREYRIGCDAFAYGLPAGLIDGGEDVEEAALREL REETGVEPAGRDGVEFDHVGQFYSSEGMTDELANIMVLHLHAWHPVERHFDGDEHVESAW VSWQRLRGTRITASNSMIAILHEQIRRNRQNTGKSSFES >gi|222441570|gb|ABXX02000003.1| GENE 85 94395 - 96539 2111 714 aa, chain + ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 2 707 10 717 836 930 60.0 0 MQIRPGSMYPLGASYDGAGVNFALFSQVAQKVELCLFDEEDNETRIEMTEQNSYVWHNYL PGIQPGQRYGYRVYGPYDPTQGLRCNPNKLLLDPYAKAIEGNIDGDESLYSYWFRSPDDV TSMNTLDSAAHTMKAAVVNPYFDWGNDQHPNISYHDSVIYEAHVRGMTNLNMDVPPDIRG TYAGLAYPSVIEYLKKLGVTAIELMPIHQFVNDSFLQEKGLSNYWGYNTIGFFAPHNAYS SSGQRGEQVNEFKSMVKAYHHAGMEVILDVVYNHTAEGNNRGPTLSFKGIDNGAYYRLVD NDRRHYFDTTGTGNSLLMRSPHALQLITDSLRYWVTEMHVDGFRFDLAATLARQFQEVDK LSAFFDIVEQDPVISRVKLIAEPWDLGSGGYQVGGFPSSWSEWNGRYRDCVRDFWRSQPS TLPEFASRFMGSSDLYQVNGRRPVASVNFITAHDGFTMNDLVSYNEKHNEANGEGNRDGE SNNRSWNCGVEGPTTIKDVNELRQQQMRNMFATLLLSQGIPMICGGDEVARTQQGNNNAY CQDNAISWTNWDLDEDQKDLLEFVSKLIHLRLEHPVLHRRRFFSGREQGDDSTAIPQVEW MDHTGSIMDMDDWSNTHAFTVMIYLNGSDIPETDWYGNQMVDNDFILIFNAHYEPIMFTL PDEQYGKKWRLIVDTHNPKGPELNYEAGFAITAQSRSFLLLMSDKKPSNKHYNF >gi|222441570|gb|ABXX02000003.1| GENE 86 96656 - 97825 1013 389 aa, chain - ## HITS:1 COG:no KEGG:BAD_0684 NR:ns ## KEGG: BAD_0684 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 389 1 389 389 642 85.0 0 MGRHQQAESSGIISFVTCAVIAWFVMNAYMQFAPAIWRVTQRLFTVCAGIVAGCGVVSFS LGYARKSRSLTLKHGWAIPVRRIFEILALSMVYASTIFVTSFMMLSIVNNMMGIRTLKGY LPILCAAIAGVVGYITFVQAELMNAKTIASLLPFFVVSGVSIAGLTSDDPYWYNNNFSQL GDRTTFAARMFNSTLTLAGICIVIISYFAVSELITTYRLQLQYLDSNAINETPKHFRTRI LLLSIMLTLAGIAFVGIGMFRYTPHPILHNVFARGLPCLMSVLMIALPWLAPQLSKVVYV VSDLAIAIGAYAGFQWLSGHNTLTNVEALAGMMFLGWFIIFSRQIAAIEADRVQTQLILA QSERPRSVEDLAEVSETVPDTVSRLAAQV >gi|222441570|gb|ABXX02000003.1| GENE 87 98266 - 99606 989 446 aa, chain + ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 8 446 13 430 430 347 46.0 4e-95 MNASQENLWPAPFAGKTLDATVVVPGSKSLSNRYLILAALGHRPVRLVGLLRSRDTELMM DALRALGVRCEIDEQVDTTVTVVPPSDGRFHGGTKVFCGLAGTVMRFVPGLAMFADGPVD FDGDEQAYARPMKPVLDGLEQLGACIEYHGEEGRLPFTITPPQTVSQCAEPSVVSIDSSG SSQFISGLLLIGSRVPGGLELHHTGEKTPSLPHIRMTVADLQGSGVRANADEHARVWTVQ PGAVQLPETVTVEPDLSNAAPFLGAALIAGGTVRVPHWPESTTQPGGLLPGYLEHMGAEI SFPVIDGVRYCEVTGSSHINGLGDFDLTAAGEIAPSLAAILVFADKPTRMLGIGHLRGHE TNRLEALVNEITRVGGEARELADGLEIVPVPATNLKPAKMETYADHRMATFAAMLGLSIN GIQVKNIATTAKTLPDFANMWTNMLA >gi|222441570|gb|ABXX02000003.1| GENE 88 99759 - 99995 70 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMKPPKVRNFRGLHHAFRLLGSSQITPLKVSDASSLLTSLRTVSGFHWFRVFRRHYDVCE RHYLCHVGPDKAKPCQES >gi|222441570|gb|ABXX02000003.1| GENE 89 100338 - 101396 852 352 aa, chain + ## HITS:1 COG:no KEGG:BP951000_1186 NR:ns ## KEGG: BP951000_1186 # Name: not_defined # Def: transposase-like protein # Organism: B.pilosicoli # Pathway: not_defined # 55 301 52 301 345 174 35.0 5e-42 MRTGKVARIADRVRKELGELTPQERDLAVKALRAALYEGFALDAATSDPNQMEACVRCGS IRIIRKGRGRDGSQRWKCMNCNRTFGVRTNRVMGMSKLKAGVWMRFLECFVDCLSLRKCA QRCGVCLKTAFLMRQRVIECIRRYTPVLRSEAGMSVQLDETYFRESFKGNHTKSAVFVMP RKAHKRTKALRKRGLSKEQICVATGVDDAGRSFLTVCGRGIISKDRAMSALKVHIGRGTD VLTDGAPAYVKPLAELGANLTQASADGHAINRVNTLHARLEDFMFGFHGVSTKYLQAYLD WFQWLVAFTDGFGETDDDRLLARQLGNGLYRIRRRDYQRMMPPYMEYWQKAA >gi|222441570|gb|ABXX02000003.1| GENE 90 101452 - 101631 279 59 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0457 NR:ns ## KEGG: BBIF_0457 # Name: not_defined # Def: hypothetical protein with RelB antitoxin domain # Organism: B.bifidum # Pathway: not_defined # 1 59 1 59 59 95 96.0 6e-19 MASIPTTTMRIEPQLKEESSQVLEDLGLTLSGAVTIFLKAVVREQGLPFEVKKETSNGR >gi|222441570|gb|ABXX02000003.1| GENE 91 101621 - 102730 837 369 aa, chain + ## HITS:1 COG:no KEGG:sce7361 NR:ns ## KEGG: sce7361 # Name: not_defined # Def: adenine DNA methyltransferase (EC:2.1.1.72) # Organism: S.cellulosum # Pathway: not_defined # 22 348 14 326 338 333 53.0 6e-90 MADKVIRIKDLRPQDVRGDRYTLHRGNVLDAYPDWEAPDLIVSDGAYGVRGFRGDTVSAD GLVDWYAPHVAQWSKRAKPSTSLWFWNTEVGWATVHPLLEANGWEYVQLVTWDKGLSHIA GNVNGNTIRQFPVVTEVSALYRRKLTLPAEDGNVLGVQQWLRAEWQRSGLPLYRANEACG VKNAATRKYLTADWLWYWPPGEMVERMAEYTKANGKPTNRPYFSVDGHTEITAERWDSLR AVWNHVNGLTNVWSRPPLHDGERLKGTLQRSAPRVYKPSKQSAAHLNQKPLDFMDRQIHA ASNKGDVVWEPFGGLASASVAAVLTGRIAYTAEIDEEFQNLALGRLAEAEDEYDTKNAND TMTLERRQA >gi|222441570|gb|ABXX02000003.1| GENE 92 102727 - 103659 634 310 aa, chain + ## HITS:1 COG:no KEGG:RoseRS_2182 NR:ns ## KEGG: RoseRS_2182 # Name: not_defined # Def: hypothetical protein # Organism: Roseiflexus_RS-1 # Pathway: not_defined # 32 281 26 279 307 187 37.0 6e-46 MTDYDGKDRPEHYELPDGDERTELRNGIVRALYALPMHFTSPINVEGIEVNDLFSINTLL GGTIEAQTVMLLNSLRSIWDPQGKWADKEFRRYPESFPDVRLVGSNKDDSPLIGIELKGW YLLSKESEPSLRYKASADAVTEWDLICCVPWGLSNVLSGKPVVYEPYVEQAKFASDMRTY YWNHRRGDNSKRDCGIHHPETTPYPKPGTQYVDVPNQDGGGNFGRIARVDGLMANWVDES MDTLMAGIEAKYWVSFFKLFSEGRPKEEIEAELSNIARKVRQAGRPDHKASMLEEQLLAH LSAIVDLSLK >gi|222441570|gb|ABXX02000003.1| GENE 93 103801 - 104169 199 122 aa, chain + ## HITS:1 COG:FN1384 KEGG:ns NR:ns ## COG: FN1384 COG0454 # Protein_GI_number: 19704719 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Fusobacterium nucleatum # 1 122 1 122 122 173 67.0 9e-44 MVDRYLDNGKMYVLDDNGVKCECVITDKENDILEIKNIATVPEYQGKGYARALIEFIVNN YREQYAILQVGTGDSPLTIPFYEKCGFVRSHIISNFFIDNYDHPIYESGIQLVDMVYLQR PL >gi|222441570|gb|ABXX02000003.1| GENE 94 104201 - 104626 164 141 aa, chain + ## HITS:1 COG:MA3570 KEGG:ns NR:ns ## COG: MA3570 COG0454 # Protein_GI_number: 20092376 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Methanosarcina acetivorans str.C2A # 1 139 1 140 140 103 39.0 8e-23 MIREFKRDDINKVADIWLDTNIKAHNFIPAEYWKSNFKSAKEALLLAEVYVYEYDTEIQG FIGLNDEYVEGIFVSGEMQSQGIGKILLNYAKDKRNKLHLNVYQKNARAISFYKREGFEI QHSGLDEATGEKDYVMTWQHK >gi|222441570|gb|ABXX02000003.1| GENE 95 104697 - 104873 145 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351897|ref|ZP_03742920.1| ## NR: gi|225351897|ref|ZP_03742920.1| hypothetical protein BIFPSEUDO_03501 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03501 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 58 1 58 58 72 100.0 8e-12 MKTEKIPYIFKYKRKKRNCCFPYKSKKNKLIEQGRYTDAVDDVLCKVLSAKKRKLKIK >gi|222441570|gb|ABXX02000003.1| GENE 96 104935 - 105189 197 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKGFCPKQGKSLKNYAIFRFSCKPRGTIPSVAKSVARKVPSPETRINTGFFGTSKPRGT TPTRKMKLNSKRFCLGNLIPFDFS >gi|222441570|gb|ABXX02000003.1| GENE 97 105353 - 106093 523 246 aa, chain - ## HITS:1 COG:CAC1448 KEGG:ns NR:ns ## COG: CAC1448 COG0480 # Protein_GI_number: 15894727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 1 245 402 647 652 159 34.0 3e-39 MQLEVVSALLSEKYKLETVVKEPTVIYMERPLKAASHTIHIEVPPNPFWASIGLSVTPLP LGSGVQYESRVSLGYLNQSFQNAVRDGIRYGLEQGLFGWNVTDCKICFEYGLYYSPVSTP ADFRSLAPIVLEQALKESGTQLLEPYLSFTLYAPREYLSRAYHDAPKYCATIETVQVKKD EVVFTGEIPARCIQAYRTDLAFYTNGQSVCLTELKGYQAAVGKPVIQPRRPNSRLDKVRH MFSKIT >gi|222441570|gb|ABXX02000003.1| GENE 98 106033 - 107136 282 367 aa, chain - ## HITS:1 COG:CAC1448 KEGG:ns NR:ns ## COG: CAC1448 COG0480 # Protein_GI_number: 15894727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 1 347 47 400 652 231 34.0 3e-60 MLLERQRGITIQAAVTSFQWHRCKVNIVDTPGHMDFLAEVYRSLAVLDGAILVISAKDGV QAQTRILFHALRKMNIPTVIFINKIDQAGVDLQSVVQSVRDKLSADIIIKQTVSLSPEIV LEENTDIEAWDAVIENNDKLLEKYIAGEPISREKLVREEQRRVQDASLFPVYYGSAKKGL GIQPLMDAVTGLFQPIGEQGSAALCGSVFKVEYTDCDQRLIYLRLYSGTLRLRDTVALAG REKLKITEMRIPSKGEIVRTDTAYPGEIVILPSDSVRLNDVLGDPTRLPRKRWREDPLPM LRTSIAPKTAAQRERLLDALTQLADTDPLLRCEVDSITHEIILSFWAGCSWRLFPLCCRK NTSLKQW >gi|222441570|gb|ABXX02000003.1| GENE 99 107343 - 107495 72 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSDKQKYDGLHEPLSVTIFTKKAKVFLNWVQKLSPCKGQSFLRPLSNFI >gi|222441570|gb|ABXX02000003.1| GENE 100 107665 - 109008 576 447 aa, chain - ## HITS:1 COG:no KEGG:ELI_1139 NR:ns ## KEGG: ELI_1139 # Name: not_defined # Def: plasmid recombination enzyme # Organism: E.limosum # Pathway: not_defined # 1 297 1 304 421 370 68.0 1e-101 MARGDGIDRTNARNMRLTETKIGNTQQHNEREKDSYVNQDIVPERTPLNVHFKAPSAGYQ EMFSQMEADGVISTRGIKADAFRYGELVFDVNSAYFYNHGGYDFAKQFYTDAYKSAIKIV GGEQYILSAVMHADERNRAMSEALGEDVYHYHLHVVYIPVVKKEIRWTKRCKDKSLVGKV KETVMQVSMSKKWASQPAVDEATGEPLRTAKGKPVLRKSYSVLQDDFFQQMRSAGYTDLE RGERGSSEEHLTVTQFKVKCEQERLAQLQEAAVLAQAEVDRRNREATAAEKKAAQAKAKL NDVAPMLKGMEKLAEEFSSDPEQVLPEAGPLESARAYREKKAKPLWAKIVKVLRSVYRAY CDLKSKFERLQADYGREVSKNSSLSERIYEVCAERDSLKGKVRDYERVRRAIGTEQADRI LEAAYQQEQAEKERKRAARQKTRVGAR >gi|222441570|gb|ABXX02000003.1| GENE 101 109463 - 110182 208 239 aa, chain - ## HITS:1 COG:no KEGG:Ethha_1796 NR:ns ## KEGG: Ethha_1796 # Name: not_defined # Def: hypothetical protein # Organism: E.harbinense # Pathway: not_defined # 5 232 92 321 351 155 38.0 2e-36 MFGMDGTNDLLFSICAKQVGAGLEEQLKRFVQEHPDTKLIIIDTLQKIREAGGDKYSYAN DYEVVGKLKRLADACGVCLLLVHHTRKQQADDKFDMISGTNGLSGAADGAFLLQKEKRTD DTATLDVVGRDQQDQRLYLTKDKEHLTWTLERMETELWVEPPDPVLEAVAAFITAERPSW SGTATELAAVLQVDMKPNALAMRLNVRAGKLAAEYHIHYENTRTHAGRSISLTLEPPQA >gi|222441570|gb|ABXX02000003.1| GENE 102 110626 - 110946 317 106 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01776 NR:ns ## KEGG: EUBELI_01776 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 105 1 106 123 89 49.0 3e-17 MSLKNRDNKNRWRNKTVAFRVSPEEDEQIEAAVRLSGLTKQDYITRRLLCREVVVQGNPK VYKALRDQLAAVLDELRRAEDGAGVDDELLDTIQMIAAIMGGMKEV >gi|222441570|gb|ABXX02000003.1| GENE 103 110949 - 112025 936 358 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 14 352 15 365 368 125 29.0 9e-29 MAAFKNKANGTWYVQFRYTDWKGERQQKLKRGFATKKEAQTWEREFLMQKQADVNMTFES FAQLYEKDMKPKLKLNTWLTKESIIQKKILPYFGKRKLSEITAKDVMDWQNAIRELTDAK GKPYSPTYLKTVHNQLSALFNHAVRYYGLQVNPAAKAGNMGVEERREMLFWTKDEYLKFA DAMMDKPLSYYAFEMLYWCGIREGELLALTPTDFDFEAGTVSISKSYQRLKGKDVITTPK TKKSNRVIKMPKFLCGEMEDYLKMFYSTGANERIFSVSKHYLHHEMDRGAKAAGVKRIRI HDLRHSHISLLIDMGFTALAIADRVGHESIDITYRYAHLFPTRQTEMADKLDFERMGT >gi|222441570|gb|ABXX02000003.1| GENE 104 112029 - 112229 184 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351904|ref|ZP_03742927.1| ## NR: gi|225351904|ref|ZP_03742927.1| hypothetical protein BIFPSEUDO_03508 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03508 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 66 8 73 73 125 100.0 1e-27 MASTMFMRVDEVAEELGVSVPYAYKLIRSMNAELKKTGCITISGRIDRKFFHEKFYGTRG QSERSD >gi|222441570|gb|ABXX02000003.1| GENE 105 112330 - 112440 72 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSPIAINANSYLVVSVESSITYSLSNSQEYLKQKS >gi|222441570|gb|ABXX02000003.1| GENE 106 112421 - 112954 222 177 aa, chain + ## HITS:1 COG:no KEGG:Balac_0969 NR:ns ## KEGG: Balac_0969 # Name: not_defined # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 58 177 14 133 133 239 100.0 2e-62 MAIGERIHFFRTLRGMTQKYLGMAVGFPERSADVRLAQYETGTRTPKADLTAALAHTLDV SPQALSVPDIDNYIGLAHTLFALEDVYSLKVVEADGRACLQADIFQGGRQASELNKILIA WREQAAKLEAGEITKEDYDRWRYNYPKYDTTQRWAKVPSKELSDALIKGLKKQRKDK >gi|222441570|gb|ABXX02000003.1| GENE 107 113007 - 113213 162 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEDLPANHPLYGSEQSKSGFGICYQFAIKCPVSALRPQCFQGFAGFVSYSHSMVAGGLEV QSSTTRLI >gi|222441570|gb|ABXX02000003.1| GENE 108 113150 - 114712 2192 520 aa, chain - ## HITS:1 COG:Rv3396c_2 KEGG:ns NR:ns ## COG: Rv3396c_2 COG0519 # Protein_GI_number: 15610532 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 196 520 2 321 321 476 73.0 1e-134 MAAGPVLVVDFGAQYAQLIARRVREANVYSELVPHSMPVDEMLAKDPQAIILSGGPASVF EPGAPRVDKKLFEAGVPVLGICYGFQAMAYALGANVDKAALGEYGKTETFIDKSEGLLDG SPADQNTWMSHGVAVKTAPEGFEVLAHTEGAPVAAMQDESRKLYGVQWHPEVKHTPMGQQ LIETFLHKCAGLGNNWDASSIIEDQVAKIREKVGDAQVICGLSGGVDSAVAAALVHKAIG DQLTCVFVDHGLLRKGEAEQVKHDFVEATGIKLIAVDASEDFLTALKGVSEPEKKRKIIG EKFIRTFEKAQRQVIEEAGASGKEVKFLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPD DIKFQLVEPLRTLFKDEVRAIGTELGLPDEIVWRQPFPGPGLGIRIIGEITKERLDLLRE ADAIAREELSKAGLDRDIWQCPVVLLADVHSVGVQGDERTYGSPIVLRPVSSEDAMTADW SRIPYDVLATISTRITNECRQINRVVLDCTSKPPATIEWE >gi|222441570|gb|ABXX02000003.1| GENE 109 115169 - 117646 3495 825 aa, chain + ## HITS:1 COG:BMEII0881 KEGG:ns NR:ns ## COG: BMEII0881 COG3957 # Protein_GI_number: 17989226 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoketolase # Organism: Brucella melitensis # 15 804 8 789 792 852 52.0 0 MTSPVIGTPWKKLNAPVSEEAIEGVDKYWRAANYLSIGQIYLRSNPLMKEPFTREDVKHR LVGHWGTTPGLNFLIGHINRLIADHQQNTVIIMGPGHGGPAGTAQSYLDGTYTETFPKIT KDEAGLQKFFRQFSYPGGIPSHYAPETPGSIHEGGELGYALSHAYGAVMNNPSLFVPAIV GDGEAETGPLATGWQSNKLVNPRTDGIVLPILHLNGYKIANPTILSRISDEELHEFFHGM GYEPYEFVAGFDNEDHLSIHRRFAELFETVFDEICDIKAAAQTDDMTRPFYPMIIFRTPK GWTCPKFIDGKKTEGSWRSHQVPLASARDTEAHFEVLKNWLESYKPEELFDENGAVKPEV TAFMPTGELRIGANPNANGGVIREELNLPALEDYEVKEVAEYGHGWGQLEATRRLGVYTR DIIKNNPDSFRIFGPDETASNRLQAAYDVTNKQWDAGYLSSQVDEHMAVTGQVTEQLSEH QMEGFLEAYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVREIPWRKPISSMNLLVS SHVWRQDHNGFSHQDPGVTSVLLNKCFNNDHVIGIYFPVDSNMLLAVAEKCYKSTNMINA IIAGKQPAATWLTLDEARAELEKGAAEWEWASTAKSNGEAQIVLASAGDVPAQEIMAAAD KLNELGIKFKVVNVVDLVKLQSTKENDQAISDADFADLFTEDKPVLFAYHSYARDVRGLI YDRPNHDNFNVHGYEEQGSTTTPYDMVRVNNIDRYELVAEALRMIDADKYADKINELEAF RQEAFQFAVDNGYDHPDYTDWVYSGVNTTKQGAVSATAATAGDNE >gi|222441570|gb|ABXX02000003.1| GENE 110 117844 - 119514 1855 556 aa, chain + ## HITS:1 COG:MT0421_2 KEGG:ns NR:ns ## COG: MT0421_2 COG0280 # Protein_GI_number: 15839794 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Mycobacterium tuberculosis CDC1551 # 230 556 5 330 334 325 55.0 1e-88 MSLTSVTIISPEAANGRNVVALGVTKAFAAAKKTAVFRPAVCRKETFTDVLLEASNSGLS REQSVGVCPKRARTDKEGSRADIVAAYTEAIETAQPEAVVVVGTDKSAINDPSIFAFNAD VAADLKSVVLLAVCTINRTPEQVLGTVEASKTIIENAGSKVAGVFITGCKDEQVEPLKEE FAAYEVPVWTLPAVDFDEEDAVTKATEAFEANVNAEELIAAVEAPFEAPTTPYAFQYSLL GKAKADKKTIVLPEGSEDRIIKAADYLLERDIVDLIIVGDREGILARGEELGLKSLEKAQ FQAKDDEEVLAPMVAKLCELRAKKGMTEEQARKQLADDSYFGTMLVVLGKADGLVSGSIN STANTVRPALQVIKTKPGTSLVSGAFLMCFKDHVAVFSDCAINLNPSAEQLAEIAIQSAE TAKAFGLDPKVGMLSYSTLGSGKGPDVDLVEEATALVKEKAPDLAVVGSIQFDAAWSPTV AATKAKGNDVAGHVNVFVFPDLCAGNIGYKAVQRSSGAVAVGPVLQGLNRPVNDLSRGAT VQDIINTVALTAIEAQ >gi|222441570|gb|ABXX02000003.1| GENE 111 119603 - 120832 1715 409 aa, chain + ## HITS:1 COG:MT0422 KEGG:ns NR:ns ## COG: MT0422 COG0282 # Protein_GI_number: 15839795 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 1 390 1 374 385 376 48.0 1e-104 MAKTVLVINSGSSSIKYQLVDLETGEGIASGLVEKIGEPVDGHYKHEFNGEKHELEEPIH DHEQGLKRVLGFFNEFGPKLDEAGIVAVGHRVVQGGSIFPNPALVTDKTINQVKDLAVLA PLHNGPEAKGAEVMRALLPDVPQIFVFDSSFFFQLPKAASTYALNKEIADQYHIRRYGAH GTSHEFISSVVPSVIGKPAEGLKQIVLHIGNGASASAEVSGKPVETSMGLTPLEGLMMGG RTGDIDPAVVFHLIRNAHMNVDELDALFNKRSGMMGMTGFGDLREVHRLVAEGNEDAKLA LDVYVHRIVGYIGNYTAQMGGVDVITFTAGVGENDDVVRKMVCDKLAPFGVKLDEEKNAT RSKEPRIISTPDSKITICVIPTNEELAIARKSAAIAEAGEDTYGNVFSK >gi|222441570|gb|ABXX02000003.1| GENE 112 121120 - 122946 1225 608 aa, chain + ## HITS:1 COG:BS_yrhL KEGG:ns NR:ns ## COG: BS_yrhL COG1835 # Protein_GI_number: 16079768 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Bacillus subtilis # 4 597 9 630 634 248 28.0 2e-65 MVRRRFVGLNGLKGIALIAIVLYHCDQGTLRGGFLGVDIFFTISGFLIFSSLLNHIDSGK GIGFKEYYLKRLRRIYPALILMIPVTVSLAWFINQDMLVDINNQIVTAMLGCYNWYAIGS GASYFSQMNPDMFRHLWFMSVLMQFYLLAPLLIYLLRKILVRWVPVAVLAGLAVCSALSM GLQYHPGTDPTRVYFGSDTHAMGLWLGAMLAWLLMIIRRGNGRPEETAIMERARLVWSKI GPAAAFVALLILLWMMQHVEQGPAAFYGGIFAASLLSVVLVAGSIPFGSWMQDLLVFKPF DVAGRYSYGIYLWHWPLWLFTKAMFPQWGARHLGWMLLITLALTACCTAMSWKLVEQPVA RGGFIAMIRPLPENGMWDVTRCWITIAVVLSTCLMSGYAVANAPKQTSVERALEENAKML KEQQGMHLDFDRKHPPAPKKPAYTMPDGQQMVAFGDSVMLASSKGLQSVFPGITVDAETS RSMTKALGLIDQAKSQPEGLRQWVLVGLATNSAVTDGQLNDILNDIGPDHVLVLINAHAP VSWVPGTNDALSNFAAAHSDNVVLVDWDATISAHPDELAGDGIHPGMSNTLYAQAVKDAI ANWIKQGH >gi|222441570|gb|ABXX02000003.1| GENE 113 123057 - 124448 358 463 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 39 463 15 433 447 142 26 2e-32 MNERGFIVREEKKKDNTNEKKGVSFEALSSLDAPVSFWKGIPFGLQHVMAMFVANLAPIF LVASAANMSAEQSATIIQAGLLVAGLGTCLQLYGVWLIGSRLPMVTGISFTYVAAAMSIA QNQGYGAVAGAVVLGGLLEVVLGLTAKYWRRFVPPIVSAIVVTSIGFSLLSVGATSFGGG SGAEDFGSWQNLTLGLISLVACLAFQLLMKGTAKQLSVLFGLVVGYVVAIFMGKVDFSGF ANLQVVSVPHFMPFQLEFDPGAIISFALLYVVSSVEVLGDTAALTKVGLDRQPTDKETAG AIAGDGLISSVSGLFGCLPLTSFAQNIGLVAMTKVVNRKVILSGGLILVIASFVPAVAEV FNSLPQAVLGGCTIMMFGNIILSGFQMISEAGYTQRNITIAALSLTIGIGFTQVGDIFVN FPPLFQSIFASNCIAVAFVVAVLLNALLPSEEHFLSAPQHQED >gi|222441570|gb|ABXX02000003.1| GENE 114 124506 - 125087 716 193 aa, chain - ## HITS:1 COG:lin1998 KEGG:ns NR:ns ## COG: lin1998 COG0503 # Protein_GI_number: 16801064 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 185 1 184 192 170 51.0 1e-42 MKELEERIRLQGTVKPGNVLKVDAFLNHQCDVELFDHMGAAWAEHFAGKTINKILTIEAS GIGIACVAARHFGNAPVVFAKKAQSINLDGDQYTTTVYSFTKQKEFPVIVSKRYLNEGDH VLLLDDFLANGKALKGLINLCHDAGATVEGIGIAVEKGFQGGGDELRAAGYDVDSLAIVE SMDPETGTIEFRS >gi|222441570|gb|ABXX02000003.1| GENE 115 125278 - 127935 1885 885 aa, chain + ## HITS:1 COG:Cgl0831 KEGG:ns NR:ns ## COG: Cgl0831 COG0210 # Protein_GI_number: 19552081 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 11 696 13 691 763 675 50.0 0 MGPVLCDPQSLIKDLNPQQMEAVKYYGQALLIGAGAGSGKTRVLTRRIAWLLAHGFWASS ILAITFTNKAAAEMRERLASLVGPEAEHMWISTFHSACVRILRRDGKEIGLTSGFSIYDT ADCERLVKLISGDLNIDTKRYTPRMLLGKISDCKNSLISWQDQLKSVNCDYKPGQRGYQV SAGDVDELVAVMYAEYQYRLAMANAVDFDDLIMRTVELFQRCPQVSEYYRHKFRYIFVDE YQDTNHAQYVLVRELSGIDSGEQPDPHMRGAGRVGPSWITVVGDSDQSIYAFRGADIRNI QDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIARNENRKPKKLWTALGEGDKIVGYAAD NAQQEAGWIANEIARIHNEEGVAYRDIAIMYRANAQSRSLEEAMINANLPYQLVGGTKFY ERREIKDALAYLQAIVNPADNVNVRRILNVPKRGLGVRAEGLVASYADAHGTTFFEAIEH MEQIEGMSTRTTKPLSAFRDMMHELAAFAKDHDTKPSEVVAEVLAKSGILEELQRSEDPQ DASRVDNLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQLPGENEDSGKVTMMTLHT AKGLEYPYVFLTGMEQGTFPHQRAMEDTSELAEERRLAYVGITRAKRRLYVTRAAVRAQW GQASDMMPSQFLDEIPDELIDWKRREAGVERMRASWQDDDDEFGGWDDDDDFGSMSFGGS SYGKSDYGSSYGSGSRWSRSSYGSSSYGAGRSQYGGPATQGSSSSYGSTSRRSCGGSGTG SSYGSYGSYGSGKSGGKSGKVTTRRVKPKNKPVDLTKSSSASPAGSHNDLNIADVHVGDK LTHDHFGLGTVIETQDKGMNSVITVDFGNGEVKRLLLRMAPIEML >gi|222441570|gb|ABXX02000003.1| GENE 116 128056 - 128454 544 132 aa, chain + ## HITS:1 COG:no KEGG:BDP_1013 NR:ns ## KEGG: BDP_1013 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 130 1 130 132 156 79.0 3e-37 MNKKLYAGISQIVLGILIAIAPQTFAHVCAVKETPMACHYTAQAALGIGIVIVALGIVGL FVSDQTRAGLDLANAVLGVLTIAVPTVLIGVCKGAMMRCHMVTLPTLIVLGVLLAVLAAI AAYLDLKPAKRA >gi|222441570|gb|ABXX02000003.1| GENE 117 128461 - 129675 1301 404 aa, chain + ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 402 1 399 401 236 31.0 7e-62 MTQHITLGGLPLVNLKRKPFRTAALTIVVAMLTVAFYGGSLLSMNLEAGLNSMQERMGAD LMVTPQNTKNEAEALLTNGSASTFYFTNEITDEVAKADGIDEITEQTYISSLAAACCDEK VQIIGFNPDTDFVITPWIASQFDGTLQRGQIVAGASISVSGNNTVKLYGHEFPVAAQLAN TGTSLDNSVFVNMQTVPDVVGYSAKVGHAAIPEEYADKAVSAVLIKVKDGYSAQQVASNI TKTTGIKSLGYVYPGGITATTKSNLNVIIRYVTLFVAVFWVMGLIVLLAVFSSAMNERKR EFAAYRILGANRSTLVGIIVKESAMIGALGGVIGIAVASLAIFPFSTLIGRQLQLPYLQT NMWNVLALIAVSFVFAVLTGLLASVTTAVKLSAPETYLTLREGE >gi|222441570|gb|ABXX02000003.1| GENE 118 129675 - 130511 244 278 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 26 277 21 221 223 98 28 4e-19 MAENTVLEVQELTREFTRRGKPFAAVDHVDFRLGQGEFVAIVGRSGNGKSTLLNLITGLL KPTSGSIDLDGNDVTRLNDKQMSVVRNRIVGFVTQSQTLLPNLTALDNVILPSVLCNGKT AQRDVEIPADSSDAKSVEETVSDASSEQTVDDGLPDVIAAAPVSKTHNDPVQDHAMERAH ALLRRLQVDDLAECYPKELSGGEMRRVSIARALMNGPKLLIADEPTGDLDAESTAIVMRL LQEVAHDGTAVLMVTHDPDALTYVDRIYRMDRGVLAEA >gi|222441570|gb|ABXX02000003.1| GENE 119 130790 - 131416 1028 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025715|ref|YP_909560.1| 30S ribosomal protein S4 [Bifidobacterium adolescentis ATCC 15703] # 1 208 1 208 208 400 98 1e-110 MTNVQRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRL RAQYGISEKQLRAAYEKGTHTAGQTGNAMLIDLETRLDALVLRAGFARTTAQARQFVVHR HILVDGNIVDRPSYRVKPGQTIQVKAKSQTMVPFQIAAEGTHRDVLPPVPGYLDVNLPSL KATLTRKPEAEEIPVQVNIQYVVEFYAR >gi|222441570|gb|ABXX02000003.1| GENE 120 131544 - 131813 211 89 aa, chain - ## HITS:1 COG:no KEGG:BDP_1017 NR:ns ## KEGG: BDP_1017 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 88 33 120 125 98 81.0 1e-19 MLGIAAFALFMALINASIKPIIHVIALPFSIISFGLVALVINWLFMQLASWLALSFFSVG VTIDGFAWSVLGSLVMTIVSGIVGGIIGD >gi|222441570|gb|ABXX02000003.1| GENE 121 131740 - 131886 160 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTWIIGFMEALISAMNKANAAMPSTGGLANGVHAGQNRNHNARRDGKN >gi|222441570|gb|ABXX02000003.1| GENE 122 131964 - 132638 750 224 aa, chain + ## HITS:1 COG:lin0907 KEGG:ns NR:ns ## COG: lin0907 COG0406 # Protein_GI_number: 16799979 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 3 208 5 206 224 121 36.0 1e-27 MLLHLHLVRHGQTFFNRYNRLQGWSNSPLTESGIADADKAANKLKEFDFAAAYCSDTTRA QMTAQRILDVNEAAGHTRPQLVSDMHFREQFYGYFEGQDMGVAWTAAGGPHGAKNYNDIV AKFGLGATRDFLKEADPFHDAESDVEYWSRVEEGFALIASNPALRDSDDVLQISHGNTLL SLMHRFAPEGYDLSERPANGSVTTLDFDTSKPIAEAVTVVSYNQ >gi|222441570|gb|ABXX02000003.1| GENE 123 132734 - 133117 559 127 aa, chain + ## HITS:1 COG:no KEGG:BAD_0699 NR:ns ## KEGG: BAD_0699 # Name: not_defined # Def: secreted protein # Organism: B.adolescentis # Pathway: not_defined # 1 127 1 129 129 193 86.0 2e-48 MGVGEIAGLIAAIAFAILAGFMIYPLIRLGKLFDQLAETVKETGDHAIPALDESVTTVQQ VNKSLEDVNKISAAASTTANNVSALTDLYGSFLGKPVIKVASAAYALKTTAQSFMNKKNV NSNNKGE >gi|222441570|gb|ABXX02000003.1| GENE 124 133117 - 133353 277 78 aa, chain + ## HITS:1 COG:no KEGG:BDP_1020 NR:ns ## KEGG: BDP_1020 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 77 1 77 78 136 85.0 3e-31 MFKRLFWISIGVGIGAVAVTKAQAYVKANTPDAARQFLFGPDQDHVAVRTLEGLFNEFNE TRRAREAELNTKYADKIS >gi|222441570|gb|ABXX02000003.1| GENE 125 133443 - 136121 3296 892 aa, chain + ## HITS:1 COG:Cgl1594 KEGG:ns NR:ns ## COG: Cgl1594 COG0013 # Protein_GI_number: 19552844 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 885 1 881 888 728 46.0 0 MRTSEIAKRYLDYFEKHGHLIVPSASLISPNPTTLFTIAGMVPFIPYLMGEQTPPKSRMA SNQKCVRTLDIDEVGKTTRHGTFFQMLGNFSFGDYFKEEAIHYAYELLTTPQDKGGYGFD PEKLWMTTFTDDEEARSMWKNEGVDPEHIQIMGMEDNFWTTGGPGPGGPCSEIYVDRGPE YGVEGGPIADENRYIEIWDLVFENYEVDNVKSKTDLHIVGELENKNIDTGAGLERLAYLM QGKQNIYETDEVFPVIEAAQKLSGRTYGDDEAMDVRFRIVADHVRSALMIMSDGVRPSNN GRGYVLRRLLRRTVKAMRELGVTDPVMPTLLPTSKAAMEPSYPELNDTFHDVSEAAYGEE DAFRRTLESGTEIFDLAVAKAKESGSDAVSGEDAFKLHDTYGFPIEITLEMAADQGVKVD EAKFRELMAEQKSRARADALKKRHNVDLSVYDDFKKTLVQPIDFLGYTDMSARAKVLGIM QEGKGSVPAVTGPATIEVILDRTPFYAQAGGQLADQGEILSDDGAVLEVDDVQKPIKDLI VHQCRLTEGTLVVGAEVNANIDLDRRGAIARAHTATHMVHKALREELGPQATQRGSEDAP NRLRFDFQWSSAPSKDAMNSVEARVNEKLRENLAVTTQEMKFDDAIALGAMHLFGEKYGD VVRVVSIGEDGWSRELCGGTHIDHVGKIGAINIMSEASIGSGVRRVDAVVGESAYEFNAR EHALVSQLSDMVNARPDELADRVNALLARLKESDRRLATMYESQLAASVPALVSETKASQ APVKVAAKNVEHFGSFDALRKTVLDVRGQLGEEFPVVVALAGVNEEGKPMVAVATNEAAR KQGIKAGDLVRGASKILGGGGGGKPDFAQGGGADATKINEALEALADQAMKG >gi|222441570|gb|ABXX02000003.1| GENE 126 136132 - 136605 258 157 aa, chain + ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 4 154 19 165 182 72 35.0 3e-13 MVWLGIDLGDARVGLALSDPGITLAHPAGNIQVYGDSFRALDEVVDVIEDESVDHVVVGL PLLLSGEEGKSAKKARRWTVNLEKRLRVAVDDENYALKEVPSIELVDERLTTVTAHHQLF DAQVGGRKHRPMVDQQSAVVILQTAIDRRERPEERGL >gi|222441570|gb|ABXX02000003.1| GENE 127 136602 - 137786 1206 394 aa, chain + ## HITS:1 COG:CC1679 KEGG:ns NR:ns ## COG: CC1679 COG1559 # Protein_GI_number: 16125925 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Caulobacter vibrioides # 32 378 6 335 366 108 28.0 3e-23 MTDNLDDFFSDNAQWVNSSDDASFVSAMPPQPPKSRKDMRRHREQKRRRRYITIIAALVV IVLIGVGGFFGVRALKHWKAVNEANSQSQIEDYTGPGDKGVTFVVESGQGAAEIADNLVK AKIVKSAAAFTSAVSGAGATLYPGSYALRTHMRASDVVKVLSDQSQAGGFAEVRAGERVS DVIENAASVSGLDVSQFQAVMDGGGAGILPDEAGGKFEGWLEPGSYNVQNKSAEDIIKEM VDARVSKLDSLGVPTGSERERILNIASIAEAEVGSEKYYGQVARVILNRLDADMALGMDT TVAYGLGISASQLTDDQLGDDSNAYNTRIHKGLPPTPISNPGDGAITAAVNPPDGKWLYF VTTNLQTGETKFVETEDEFWQIRDEYKNNNENAN >gi|222441570|gb|ABXX02000003.1| GENE 128 137789 - 138259 407 156 aa, chain - ## HITS:1 COG:no KEGG:BDP_1024 NR:ns ## KEGG: BDP_1024 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 156 7 162 162 208 75.0 7e-53 MWYMICLPSLLCGLAISVEDIRSRRIPRAWIATGCTAQIIVNLIYALSINTLYLALQAIL FAVLSAVLQCALALVKPGSLGFGDVTATLLMGLAVGMFGLFAVVFWWLAIGVVGLLWLVL WTRFDPQKHTAYAGKTPFAPALVAAGAIGIAIGVLF >gi|222441570|gb|ABXX02000003.1| GENE 129 138307 - 139500 1301 397 aa, chain + ## HITS:1 COG:MT2615 KEGG:ns NR:ns ## COG: MT2615 COG0082 # Protein_GI_number: 15842074 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 391 1 388 401 446 64.0 1e-125 MLRWQTAGESHGEALVAMIEGLPAGVHITTEDIVGALARRRLGYGRGARMKFEQDKVRML TGVRFGETIGSPVAIEIANTEWPKWTEVMSADPLDHELAREGRNAPLSRPRPGHADLTGM RKYGFDDARPVLERSSARETASRVALGEVAKQFLEQAFGIRTVSHVLSIGGAGITDPQQA TLPKPEDLEALDASPVRTLDKNAEERMIARIDEAKENADTLGGVIEVVVYGVPAGVGTYV ESDRRLDAALASAVMGIQAIKGVEIGDGFLEAMRPGSQAHDEMVVGDDGRIARLSNRAGG IEGGMSNGQPIVVRAAMKPIPSIPKALRTVDVTTGEPAQAINQRSDNTAVPAAAVVAEAM VRLTIAQYVLEKFGGDCVAETKRNAEQYVASWPEHMR >gi|222441570|gb|ABXX02000003.1| GENE 130 139508 - 141136 1583 542 aa, chain + ## HITS:1 COG:Cgl1583 KEGG:ns NR:ns ## COG: Cgl1583 COG0337 # Protein_GI_number: 19552833 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Corynebacterium glutamicum # 179 542 10 365 365 314 48.0 2e-85 MSGMRRPVAVIIGMMGAGKTRVGKEVAQMMNLPFADADNEIEHDAGMRIPEYFEKYGEPE FRRLESDVVLDMLEDFDGIFSLGGGAPMTPSIQEGLAQYIADGGKVVYLMADPEEAMERA NRGGGRPMLNGDANERWKKLYKERDPVFRSVANVHVGTRGQSPQAAARKLMEMIDQRIVH VTGSTIEPYDVRIGEGVMGQLAQVLGSKPAKVALIHTQPVQRHSDRARTLLRQAGYDAYD IVIPDAEAGKTIEVANGIWQRLGDEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVN CPTSLLAMVDASTGGKTGINTPQGKNLVGSFYTPAGVLADLKSLASLPNDIFIEGLGEVA KSGFIMDPEILQILEDHAGELRAFDGSTFLDSGLKDVVAELIEHTVSVKAYHVSADLKEA GLREFLNYGHTLGHAIEKLEHFRWRHGNAVAVGCVYAAELSHLLGYIDQDLVDYHRSLLG SLGLPTSWNNGTWDDVLALMHRDKKARGNKLRFVVLEGVGHPIHLEDPPADAVEEAFRRI QQ >gi|222441570|gb|ABXX02000003.1| GENE 131 141157 - 141606 675 149 aa, chain + ## HITS:1 COG:DR0778 KEGG:ns NR:ns ## COG: DR0778 COG0757 # Protein_GI_number: 15805804 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Deinococcus radiodurans # 4 147 2 143 143 145 48.0 2e-35 MTKVVVVNGPNLGRLGVRQPDVYGKQDLETLRTLCAQWGSELGLDVEVRQSDDEAEMIGW MHQAADEKTPVVMNPAAFTHYSYGLADAAHMVIDEGLPLMEVHISNPSARDEFRKRSVIS PVATGTITGMGFYGYKLALDAVAHLLESK >gi|222441570|gb|ABXX02000003.1| GENE 132 142013 - 147271 6672 1752 aa, chain + ## HITS:1 COG:CAC2679 KEGG:ns NR:ns ## COG: CAC2679 COG1523 # Protein_GI_number: 15895937 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Clostridium acetobutylicum # 969 1570 82 670 720 468 42.0 1e-131 MVVQRMNRPASRAVAIGVAAAMACATLVAVPHMAQAQPEAQTNAKKDVQVIAFQQTWNTV AKECTSTYGPEGVAYVEVSPPQESIQGTQWWTSYQPVSYKLDSKLGTEAEFKNMIKQCNA VGVDIIAYVVLNQTTGADVADGKQTGVAGTEYNGSTGDYPGFATEQYPEGITASDFHSCS KNISNYANQQEVQECRLSSMWDFDSESEKVQDIQSDYLAALWNAGVRGFRMDAVKHIHTD SMRAIKEKFAKKIGVNADSIYWIQEVIGNSSEAAGIQPSNYVQNGTVTEFGFKSEMNQTF KDKIANLKGLNERLSKDLASEDANVFVTNWDTARNEGALTYKDGAKYQLANAFMLAYDYG TPRLLSDYKWDENDNGAPGATATSVPDVNMDEVCSTNSSDWNCEQRWTSTRGMIAFRNYV NGTKVADWQDDGGDNIAFSRGDKGFIAINNGKTDKDASYTTSLADGEYCNVYATMDCSQT VSVKNGKVETTVPAHSAIALYAGATKDSHPASSVANDPSDPDVNQEGDETLPDDRSVTIY YKPADSSWKSPKVHYGLGDDWNQPEADMTLDEQGYYRATIDTRGKKIDFVFHDTGTDQWE NPKGGGNYHANAGITHVGVADQAATVGNPESVNGQTRLVVHYKPASDSDNRGVYVWGTDA GGSSLSAVNHPFTGADCWGKVATLTFGGKFDKFGFIVTTADWNKYGGDRSATVNADGTAE VWIDGTKYEDQGESTTVETLDSAPSDYECKANTVTVKVHYNRDDGLYYNAEDTSVTVPQW DIWTWASNWNGGAATFTTHDDWGEVAEYSFTNYTYYNVDGASDIGMLRRYGKDAWKAKDP DDADYKIPSNALVFNESDGTASAEVWLMGGDATVYSSRPSLGASMKSVEISDVNKLTARL SKKVTSDELEGKVSVTDADGKAVDVKNIKTDGTKVIITTAKDLDMRGKYTVEVKGFGSQD AIAGSVVRTDAFDKKYAYDGDDLGATYTSAKTGFKVWAPTATKVELVTYQSDDVNAEVDK TVDMASEDKGVWSALVKNLASGTAYSYKLTFADGTVNVSADPYATAAVANGERSVVLSSE DMGSAGDRMPEFGKTTDATIAEMNIRDFSINPNSGISADKRGKYLGVVESGTKTANGATS GLDYLKQLGVSHVQIMPMYDYGSVDEIGDLSYNAQGAQNWGYDPENYNVPEGSYSSDPSD PASRVTEMKQMVKGLHENDIRVIMDVVYNHVYNAANHSFNKTVPGYYFRYDDNGSLVNNS GCGNDTASERKMMRKYIVDSVTYWAKNYNVDGFRFDLMGLIDTETMKEVRAALDEIDPSI IILGEGWDMNTTMDEGEMTIQPNAYQVASDGTNNGIAFFNDSVRDGLKGSVFSDTDTGFV SGKADQESLIAHNVLGCQYDENATTTCWNGNAQDHYADAGQVVNYAEIHDNMTLYDKLRK SVPTDDDATTVARAKLADSVVYLSEGIPAIQLGQEFLRTKGGDGNSYNTGDAVNAIDWDR TTQYADSVDYVKGLIKLRKQINALRLTDYNDINANVTMLKSADGVVAYQAEQSDGTYVVI FNANADKTAIEGLANGSYQVLAADGKVYSDDAIANVDLAEGASYEAGALSATVLKLDSST KPDTDSAPVIKGLVASDSVTLGSKFDPMSGVSAWDEVDGDLTDKITVEGSVDTSKEGEYT LVYSVTNSRGKTATFTRTVTVRKPAVQPASDKKSDAVQSPNTGSAITGFALAAVALAIAS VFAFAASRRKED >gi|222441570|gb|ABXX02000003.1| GENE 133 147404 - 149065 1930 553 aa, chain + ## HITS:1 COG:ML1363 KEGG:ns NR:ns ## COG: ML1363 COG0504 # Protein_GI_number: 15827710 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Mycobacterium leprae # 4 550 2 549 590 751 67.0 0 MVRRQHGNSQEHVTKHIFVTGGVVSSLGKGLTASSLGRLLRSRGIKVLQQKLDPYINVDP GTMNPFQHGEVYVTEDGAETDLDIGHYERFLDVYLSQKANVTTGQIYQEVLRKERAGEYL GQCVQVIPHITNEIKSRMRAQASDDVDVIITEIGGTVGDIESQPFLEAAREVRRDLGAEN CMFVHVSLVPYIAAAHELKTKPTQHSVMMLRQLGISPDALVLRSDRPLNQSIKDKISLMC DVDSEGVVNCVDAPSIYDVPKTLFDEGLDAYVVRELGLPFHDVDWDEWEDLLERVHHPKH EVNIAIVGKYIDLPDAYLSVTEAIKAGGFANYAKVNVKWVAADKCETEEGAAAALDQVDG IVVPGGFGIRGIDGKIGALKFARENKLPALGLCLGLQSMVIEYARHVLGLEDANSTEFEP DCATPVIATMEEQKDIVAGNGDMGHTMRLGSYPAELEEGSIVAELYGTTHVTERHRHRYE VNVAYKDRLREAGLRISGQSPDGELTEFVELPREVHPFYVSTQAHPEFKSRPTKPHPLFA GLVKAALDHQQER >gi|222441570|gb|ABXX02000003.1| GENE 134 149227 - 150894 1264 555 aa, chain + ## HITS:1 COG:no KEGG:Balac_0920 NR:ns ## KEGG: Balac_0920 # Name: not_defined # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 39 554 52 554 555 473 47.0 1e-131 MDSPESGNGKFAFPNMGDEPKVISQVSLDSFAETADSIDDGAALTVNASKKRHLLWLWIV LAVMLLLGAVAGGGYWFFQSHALPGVTLWGKSMTGQSRDHIIQEISDTAESLTVPVSYEG TSKKVTLKDLGVAIDAESIAENVMNAKRDDSFFQKYAFWTREDVDVESFDDSRVSAQTVG DMLGVQSVSATNPSLQLNADGTAFDVTPGQQGTGIDVTDIVKEAKNVLESFGKQTAQMVT LKNKVTDPAITDDQANEAKASADAWIAKPVAIKIGDHKVAEFGAQSIASAITLGPDSEKL GDNQTRNGSLIIDGDKLQQYYNDSIKSNFHADRVDGDVIVNSVGDVLQTNVAGHDGITVT DGSDTNVGRDAAEAFAKGSDSVSIQGTCDPQNEKKTTRTVVVSLSSHTVTAIENGQTVRV MHMSAGQGNDYQTGQCQPSGDLCTPTYCDPNSYDNCTPDGDFKVWLKYQSQDMSGTLTLS DGNTEKWDVKDVGFVNYFSKTGCAIHRIATQSAFNDSSIQAMGKNTSHGCVGVGWDQAEW FYNWCLMGTTVHVQA >gi|222441570|gb|ABXX02000003.1| GENE 135 151075 - 152571 1616 498 aa, chain + ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 33 498 16 481 481 689 69.0 0 MAENQAPNAAADVEMSQYVADRTRVNEDKIKQDDEIIQQFGDYTYGWHDTDFAGEAAKKG IDENVVRAISADKNEPEWMLEKRLEGYRDFINRPMPQWGVDLKDFDADDFKYYVKPIDKQ ATTWEELPDEIRATYDKLGIPEAEKSRLVSGIAAQYESEVIYNSIQKDLEDQGVIFVDTD TAVQKYPEIVKKYFGKCIPSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINTP NMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYTTVQNWSNN VYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFAGKGQYQDT GAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALLVDEFSRSD TYPHVDVREDDVSMAHEATVSKVSEDQLFYLMSRGLSEEEAMGMIVRGFVEPISRELPME YALELNRLVELQMEGSVG >gi|222441570|gb|ABXX02000003.1| GENE 136 152577 - 153800 1036 407 aa, chain + ## HITS:1 COG:ML0594 KEGG:ns NR:ns ## COG: ML0594 COG0719 # Protein_GI_number: 15827240 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Mycobacterium leprae # 34 401 20 391 392 280 42.0 3e-75 MAQTQEINIPVADPNDPYANPAAMPSSADRSPRSFDVDAFEVPDRKQDDWRYTPVERVEE FFNAFTPSNETQIAVTMIDGTALTEGVTYSEGKPGDADTGIVSKPCDRVSAVEWNSASRA GILRIDGEISQPILVKIHGAGTDLDAFHLVIIAADRAHADVVVEHDGDARIAEGVEILTG RDSHVSTTFIQEWNKGSKHVGNQRIHLGEGASLRHSVVTLGGDVVRIRMDQDFGGDQGDL NMLGIYFVDPGEHIEHRTMIVHNHPECKSRVVYKGALDGKGAHSTWVGNALIAPTAPGTD SYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPETEAR KLVVRGFFGELVEEIGIPAISEHLMNVIDKRLARGENDAIAQVLEEK >gi|222441570|gb|ABXX02000003.1| GENE 137 153819 - 154598 1222 259 aa, chain + ## HITS:1 COG:Cgl1525 KEGG:ns NR:ns ## COG: Cgl1525 COG0396 # Protein_GI_number: 19552775 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Corynebacterium glutamicum # 1 248 1 251 252 342 68.0 5e-94 MSTLEIKDLYAHVETKDGIKPILKGVNLTVNSGETHAIMGPNGSGKSTLAYTLAGHPKYV VDSGQVLLDGEDILKMTPDERAKAGIFLAMQYPVEVPGVSMTNFLRTAKTEVDGKAPAIR TWTKELSEAMKRLKMDPKFATRSVNEGFSGGEKKRAEVLQLELLKPKFAILDETDSGLDV DALRIVSEGVNRAKEANQFGILMVTHYTRILKYIKPDIVHVFAAGHFVKTGGPELADELE ESGYDAYLPEGSDSESALA >gi|222441570|gb|ABXX02000003.1| GENE 138 154595 - 155869 1241 424 aa, chain + ## HITS:1 COG:MT1511 KEGG:ns NR:ns ## COG: MT1511 COG0520 # Protein_GI_number: 15840924 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Mycobacterium tuberculosis CDC1551 # 3 422 9 415 417 379 49.0 1e-105 MTDFAAIRKEFPILDQEIHGHPLVYLDSAATSQKPQCVIDAESDFYRTINAGVHRGAHEL AARSTMAFEEARAKVARLVGANSAEGEEEIVVTSGATAGLNLLATAFGNASLGRGGEAAR RFAVKPGDEIVVSKAEHHSVLLPFQELAVRTGATLKWFDLDSEGRILSNTADEVITERTK IVAVTHVGNTTGAITDIAPMVKRAHEVGAVVVLDACQSVPHLKIDLHALDVDFAAWSAHK MYGPTGVGFLYGKRDMLEALPPANFGGSMVELAWMDQEAQYMAPPARFEAGTQPVAQVVA AGVAAEWLMNIGMENLEAHERVIAGELLKMGQIDGVRILGPQTNEQRIGTVAFEIDGVHP HDVGQFIDAQGIAIRVGHHCAQPVHRHFGVYASNRASSGIYNSVEDAQALVEALKKVRPF FGVE >gi|222441570|gb|ABXX02000003.1| GENE 139 155875 - 156426 663 183 aa, chain + ## HITS:1 COG:Cgl1523 KEGG:ns NR:ns ## COG: Cgl1523 COG0822 # Protein_GI_number: 19552773 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Corynebacterium glutamicum # 10 172 2 138 149 110 41.0 2e-24 MSDFAMSGDDLEQMYQEVILEASKNPHGKEHFAPDLASENASQAGKTTVQATHEYCTPGE SHQFNPTCGDEATVHVEVSDQEPHVIERLVWDGHGCSISQASLSVMVDLVEGKTVDEAME LAGTFHKLMESRGKGLDDESAEESLEDGIVFQGVSKYPMRIKCALLGWEGMKDSVAKALA AKA >gi|222441570|gb|ABXX02000003.1| GENE 140 156570 - 157157 575 195 aa, chain + ## HITS:1 COG:MT1513 KEGG:ns NR:ns ## COG: MT1513 COG2151 # Protein_GI_number: 15840926 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 92 187 13 113 115 113 59.0 2e-25 MSDTLVPEPQASIFDSVAKALGNDEAAARRVMLNPNLAKGFKDGKPVEIEHEDTKQDACG CGNQAGACGCSEEQDDGIALKAIDDIGRATAADVKEALHQVIDPELGIDVIDLGLVYGIE IDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEEFRIDWTWQPRWSMEKITPEGRE QLAALGFNFDNLPKY >gi|222441570|gb|ABXX02000003.1| GENE 141 157354 - 158598 1535 414 aa, chain - ## HITS:1 COG:Cgl1094 KEGG:ns NR:ns ## COG: Cgl1094 COG0448 # Protein_GI_number: 19552344 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 5 394 9 392 409 422 57.0 1e-118 MAKNPKILSIVLAGGEGTRLMPLTRDRAKPAVPFGGVFRLIDFPLSNLVNSGYMQTVVLT QYKSHSLDRHISTVWRFSPLLGNYVSPVPAQQRLGKHWYLGSADAIYQTINIIEDVQPDI VVIVGADHVYRMDFQQMVQQHIESGAEFTVAGIRQPISQSNQFGVIEVDPEHPNMIKSFQ EKPQTTTGLPDDPNSILASMGNYVANTDALFEALALDEKAEDTKHDMGGDIAPYFAARNE AGVYDFNSNEIPGATPTDHAYWRDVGTLKQFYDAHMDLISYVPEFNLYNTEWPIYTLSGN LPPAKFVHAGRDRLGHATDSIVSPGVIVSGGEVHHSVLSPNVRIHSWSQVVDSILFDGVT INRRARVYKAILDKNVVLTENSTVGIDTEHDLARGFTVTPEGITVVPKGTVVDD >gi|222441570|gb|ABXX02000003.1| GENE 142 158746 - 159612 576 288 aa, chain - ## HITS:1 COG:Rv0881 KEGG:ns NR:ns ## COG: Rv0881 COG0566 # Protein_GI_number: 15608021 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Mycobacterium tuberculosis H37Rv # 10 283 22 275 288 174 37.0 1e-43 MQFIHLDSIDDERVSAYTNLTEIQLRNKLEPSKGLFIAESPKVIDRALTADREPISLLVE EPWIGGMSETFARIDQRWGTDIPVYVASPEQLKQLTGYRLHRGALAAMKRWPLPSVEEVC RGARRIAVMENIVDHTNVGALMRSAAALNVDAVLVTPSCGDPLYRRAARVSMGTVFQIPW TRIGGDDKHYWPFTGMQELRDLGFTTVAMALEDDSISLEELVRRLNNDNGEKDHIDKLAL IFGTEGDGLSHHTISRADLTVKIPMSHGVDSLNVAASSAVAFYSTAVH >gi|222441570|gb|ABXX02000003.1| GENE 143 159746 - 159922 114 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFRIKQEKGISHSFRAYQHLGYQWRNSARHAETCITPSICYSFRLLPLSNAPVRVAEW >gi|222441570|gb|ABXX02000003.1| GENE 144 159887 - 160684 811 265 aa, chain + ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 36 258 26 235 241 112 32.0 9e-25 MTDALFLLDTEHDDVPVNSDELNAGWKLTLPQSVRRHAIQAMRLKDGDELQLSDGKGLRI HAVLRDAQQGIAEVSSFGKEPQPTTKLALIQALAKTGHDEQAIDTATQIGVDEVIPWQAD RSIAKWKAGRTDKKWRQVLDAATEQSRRSWTPELGECVTSKQLIAICKRACVHGDMVIVL HQDATKTWSQLEEAIAVLSDKCLQDGRQRTVYVVVGPEGGISDAEIESFTNAGAEACVLG SNILRASTAGPVALSLLARALGRFI >gi|222441570|gb|ABXX02000003.1| GENE 145 160769 - 161104 439 111 aa, chain + ## HITS:1 COG:aq_141 KEGG:ns NR:ns ## COG: aq_141 COG0537 # Protein_GI_number: 15605719 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Aquifex aeolicus # 1 109 1 116 121 117 45.0 5e-27 MSDKDCLFCKIIAGEIPSEKVYEDDTTYAFKDINPKAKVHVLVVPRKHYANVTELAAADP QQLAHMAQVAQNIADQEFHGAFRLIFNTGIDAGQTVLHVHAHVLTGEKLDE >gi|222441570|gb|ABXX02000003.1| GENE 146 161144 - 162283 726 379 aa, chain + ## HITS:1 COG:BS_phoH KEGG:ns NR:ns ## COG: BS_phoH COG1702 # Protein_GI_number: 16079588 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Bacillus subtilis # 141 350 108 318 319 275 66.0 1e-73 MATTTRTIAIPQQLDPVTVLGPVDEVLREVERAFPDLTIIVRGNRIAIMSRSSKSESQAA QAEHVIENIIQAAYTAPMDADTVRRMLDQNVLKNPVRATRPGHGRVVEELRLADRQQEHT SNRENHADRRKPHVPGVITFALGKPVRAKTAGQITYVNAIESHTITFAIGPAGTGKTYLA VAKAVRAFQDRQVRRIILTRPAVEAGESLGFLPGTLNEKVDPYLRPLYDALSDMLGADQL KRYMDDGTIEVAPLAYMRGRTLNDAFVILDEAQNTTEQQMKMFLTRLGFNTKMIITGDVT QVDLTVPKSGLATIERILDGIDDIAFAHLKPEDVVRHALVGKIVAAYDRHAAIAGDHSRH ATGKTTSRQTSEQIERNAE >gi|222441570|gb|ABXX02000003.1| GENE 147 162280 - 162825 526 181 aa, chain + ## HITS:1 COG:Cgl2235 KEGG:ns NR:ns ## COG: Cgl2235 COG0319 # Protein_GI_number: 19553485 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 1 146 1 151 196 145 49.0 5e-35 MSVEVTNETVWQIDGKVFSDLGIWVMDQMRVSTQSDLTIMFVDPDPIAQLHMRWMNLEGP TDVMSFPMDELRPGDGRTVMEGVLGDIVICPWVAAQQALAAGHNTMEEMMLLTIHGILHL LGYDHATPEQERQMFGLQRQLLLTFFALRQGAGTQAILPPDTPDALAEWDRQHGTGRQIA K >gi|222441570|gb|ABXX02000003.1| GENE 148 162887 - 164296 1237 469 aa, chain + ## HITS:1 COG:Rv2366c KEGG:ns NR:ns ## COG: Rv2366c COG1253 # Protein_GI_number: 15609503 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 12 444 10 430 435 221 34.0 2e-57 MIAMIVVLAVVALLLVWLSLSMAATEGAVGRVTRASLNNLILEIQTDAELSQFIRDKKIR RIHKVQRLVADRYATAGSCAFFRICCNVVDGVLVTVIAGMLDAPLWAELLAGFVFAIVIA VISLLVRPRSAGASKPVDIMLQHVDAVSIAVLLTPFAKIGGQKGAKRRGSDLSDDEELEK IQIEQGRATIDRLVEANDFDPEVSEMLRNVLTLSETLTREIMVPRTDMICIERDETLENM LKLCSRSGFSRVPVIGDDVDDLVGVAYLKDAVRATTFNHAAMTREVESIVRDPMLVPESK PVDDLFHQMQRTRQHVAIVVDEYGGIAGMVTIEDAIEQIVGELEDEHDRTQHADPERIGD KKWSMPARTPIADLEEIFEIDIDEDDVDTVYGLLTKLLGRVPIVGSSAVTRGLRMTAVDS AGRRKKVSTIVVEPAHVEGVDETETRNEEHADDAEKASDNDKDSKDKHD >gi|222441570|gb|ABXX02000003.1| GENE 149 164392 - 165288 907 298 aa, chain + ## HITS:1 COG:MT2433 KEGG:ns NR:ns ## COG: MT2433 COG1159 # Protein_GI_number: 15841876 # Func_class: R General function prediction only # Function: GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 2 298 18 300 300 241 47.0 1e-63 MGKSTLINALIGTQIAIASSRPETTRKAIRGILTTDNAQIVLVDTPGIHRPRTLLGQRLN DVVDESLADVDAVAFLLPSNQEIGPGDKRILSRLRSDFAVKRDDGTFKWKVPLVAIVTKI DELSRDGLINKLIEINEFADFTDIVPVSALKHDNLAEVKNVLIENMPEGPQMYPAEQITE ERPEETIAELVRGAFLEELDDELPHSLAVVVDSIEYPEDNDSGEAYDGKAHVIVSIYVER DSQKPIIIGKGAEHLVRVKKKLRTPVNRIVGQKAKLDLHVKVAKGWQSDPKQLEKLGF >gi|222441570|gb|ABXX02000003.1| GENE 150 165492 - 167528 2462 678 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 102 667 24 591 600 407 39.0 1e-113 MSVITSLNKRAANLAQKALRLGGDFVHPVSDDSGNTPDYNDPNNIISPDGHIDLPHTVEW GEGFPSTTFLDPETGLLTTKTEGKPPLDEGTTIYDIYADRAERMGDEPLYTYKTNGEWVT KTGNEVLADIRQIAKGLMHYGLKKGDGVAFMCRTSYEWDVFDAAVMACGGVLATIYDTDS AEQIRNIVNNSDSRLLVVETTDMRAKADGADKECPALEHIICFENGGLDEIMAYGSGVSD EELDERIASIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPAYMPKLLHERKNSV LLFLPQAHSFARAINYICVASELHIYIAQGIKTLIADLQVAKPSVMIVVPRVLEKVYNAA SQKAGHGAKGVAFAAAVVAAQNYMKEVSAKGKAGALAKARRMAFDPVVYASLREVLGGRA QWIVAGGAPLDPELMAFFRGAGVPVYEGYGLTETTAPCAFNPLGVPYHQGSVGVAFPGFE LRIAEDEEIQVKGTAVFPKYHKNEEASEDSFTEDGWYRTGDLGRIDDDGFLYIIGRKKDL IITAGGKNVSPGPIEEVIKRCEFVSQALVLGDKRPFISALVTLDEESLRPWLESKGLNRD IPMEEAANNAAVRAEVQKWVDQANEGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPK VIKRYATLLNTQMYTKKK >gi|222441570|gb|ABXX02000003.1| GENE 151 167765 - 168910 1520 381 aa, chain + ## HITS:1 COG:RC1334 KEGG:ns NR:ns ## COG: RC1334 COG3288 # Protein_GI_number: 15893257 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Rickettsia conorii # 14 358 6 352 374 247 42.0 3e-65 MAETAEATVVFGVLNETSEHESRVALTPDIVTRLRKSGVNCLIESGAGVASHYVDEDYSK AGAQVVSADEVIARADVLGFVDRPSSALLGRVKQGTWIIGMLGSFTDADYVTAIEKAGLV GVAMEKLPRQLSSAQSMDEMTSQNSVMGYKAAIVAANAYGSFLPMMTTAAGTIRPAKVLI LGAGIAGLQAIGTAKRLGAVVTAYDVRPASKGEVESLGAKFLDLGLDFSKGQGEGGYARA LSAEEQAQQQAAVDQKAAGFDIVITTAKVPGRKPPVLLTKAGVAGLHRGAVIVDCAASDL GGNVEGSTVGTQVTENGVTIIGAPYLSSGVSTTASNLLSRNVADVLAHFVRDGKLAIDLN EELDNAMVVAGRGEEAKKEGE >gi|222441570|gb|ABXX02000003.1| GENE 152 168914 - 169219 467 101 aa, chain + ## HITS:1 COG:Rv0156 KEGG:ns NR:ns ## COG: Rv0156 COG3288 # Protein_GI_number: 15607298 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Mycobacterium tuberculosis H37Rv # 7 92 9 96 110 82 52.0 2e-16 MDIVVAITLFVLALLIGVEVIGKVPATLHTPLMSGANSIHGIVIAGVVIVAAHATSPLAW VFIFLAAVLGTMNVVGGYVVTDRMLEMFKSDKGKKKEEEAK >gi|222441570|gb|ABXX02000003.1| GENE 153 169220 - 170665 1927 481 aa, chain + ## HITS:1 COG:mlr5184 KEGG:ns NR:ns ## COG: mlr5184 COG1282 # Protein_GI_number: 13474323 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Mesorhizobium loti # 18 476 8 463 465 341 46.0 2e-93 MGTMAEMLSTPLGVIEWFVYLLAAVMFVIGLHLMNSPKTARKGNMVSAVGMILAVVMAFI VLFAGEISNGFQHGVAVVLLIAGIIIGAVAGVVSAKKVKMTDMPQLVSVFNTVGGGAAAL VALNDILTSEGTPSIVVLITAGLGIMIGSVTFSGSLIAAGKLQGIKWVKKLNLPGKGFWN ILFAVLTVVSFVMLCVQPGQRLLWSVLTTVFALCYGLVFVIPIGGADMPVVISVLNACTG TAVAMSGLAINNIALIVAGALVGAAGVTLSIAMSKAMNRPLLSVLAGGFGGANAAAGAGE GPEGSMKETSADDLAVQLVYAEKVIFVPGFGLAQAQAQRELADLGVLLKNHGVEVSYAIH PVAGRMPGHMNVLLAEANVPYEELVDLDDINPQFPQANVALVVGANDVTNPAARKPGTPV SGMPILDVDKAQNVVVMKRGRGTGYAGIQNELYFEDNTQMLFGDAKASLQAVIAAVKELI N >gi|222441570|gb|ABXX02000003.1| GENE 154 170735 - 170869 103 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212716031|ref|ZP_03324159.1| ## NR: gi|212716031|ref|ZP_03324159.1| hypothetical protein BIFCAT_00943 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_00943 [Bifidobacterium catenulatum DSM 16992] # 1 44 9 52 52 71 95.0 2e-11 MVIFVRSGLLHANCELSTVVIRLWIWVEFSTYPQIFKVRWRKMI >gi|222441570|gb|ABXX02000003.1| GENE 155 170911 - 172278 1077 455 aa, chain + ## HITS:1 COG:no KEGG:BAD_0727 NR:ns ## KEGG: BAD_0727 # Name: not_defined # Def: putative riboflavin-specific deaminase # Organism: B.adolescentis # Pathway: not_defined # 1 447 3 449 457 496 57.0 1e-139 MAEIITGPFHMDEQGFLATIEELIERFDGYSSGKYLAELGKIHDEYGEIGSLSLFDEKVC ELGKELFCSTSWVANLAWAMISFDYDLVEHDANFLDGCRNIVRKYGMSVWLYEMINDASI AVALQRPSSRMPFQIGLTYTKDVFRRSKKKGGKYATSKKKRLACMAEYLQEVYWLAAYSL LRWGEEEPRAADVALMVLGYGGIGMCMLRDDPKVVDSGCDEDFSYRNLCDHLRDLRIQAD LDYACNADLAESMLLEYPACMDARYLYDAGKIVEAYRALWNKQTESASQIMERVYQKGAY QVTNIWEDPLYLHDLALSLLGAVGSRPLTEGFRTRDDKMFQQGVESLRRTTESVKGMGLA MTLGGYICFPEPESRDDALFAPRKEKKRLMDACNGLRDLSAMVALYRFPRDIESLRATRA LLAHDAKGYIDLMGPYMGSADETGGNEGRPVSIGD >gi|222441570|gb|ABXX02000003.1| GENE 156 172348 - 172599 197 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351957|ref|ZP_03742980.1| ## NR: gi|225351957|ref|ZP_03742980.1| hypothetical protein BIFPSEUDO_03562 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03562 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 83 47 129 129 166 100.0 4e-40 MRCSTADISYTGMFDRGSLARHVQNCYAYADWTSTLVEVNYVNENFCLSFTQKFATDRYV KAFRELLEQYGIACTEIEETKFI >gi|222441570|gb|ABXX02000003.1| GENE 157 172729 - 172995 117 88 aa, chain + ## HITS:1 COG:no KEGG:BDP_1055 NR:ns ## KEGG: BDP_1055 # Name: matE # Def: MATE efflux family protein # Organism: B.dentium # Pathway: not_defined # 1 57 202 258 465 76 64.0 3e-13 MGHFQLGPADAALGTIFAQTISVIVALVVIRCKQKGIRLRKADFKPNRNMLGGILSIRTF VYRLHYPALLGNRIVKVRKQWASQPCQG >gi|222441570|gb|ABXX02000003.1| GENE 158 172933 - 174216 715 427 aa, chain - ## HITS:1 COG:PAB0724 KEGG:ns NR:ns ## COG: PAB0724 COG0477 # Protein_GI_number: 14521293 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pyrococcus abyssi # 17 397 4 374 418 120 24.0 5e-27 MKNSSAKTLQSSLCSANFILLVLGQGISLFGNTMLRFAMSMWVLDETASSTTFATVLAIS VIPTILISPFGGVMADRVSKRAMMVALDIISGIVTLLATVFFALSGFNILAIAIMQVVLA VLDAMETPVVQSALPQIIGRESSTDLRRGAAIINQVQQLSQLLPSFLGGVMYGLVGIRPM MLITAACLMSAAMVECFIRLAKPLSNQDDAGICLLDVIIGDMHSATAFLLRKEPTVARLA GVCTWINLILTGFSSVSFPYIIRTTLGYDAATYGLCDGIIGIAGIAGTFIAGCFANRLKS RNAPSLLFVESLMLLPPAIAFLLPCSTQTKLIMLVLCTAAVIIAVDFLNLILVPSIQMRT PTALTGKVMAIISSLTICAQPLGQMLYGWLHAHCTVWLILLISALASLPLAWLARPLFAH LDDTISK >gi|222441570|gb|ABXX02000003.1| GENE 159 174291 - 174947 622 218 aa, chain - ## HITS:1 COG:mlr0908 KEGG:ns NR:ns ## COG: mlr0908 COG1309 # Protein_GI_number: 13471041 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 6 155 7 161 236 63 30.0 2e-10 MARNAHPEVTRQRILDAAKKLFAQKGYERTTIQDILDELEDLSKGAIYHHFKNKEAMLHA LVDSDNERLLPQANQEDGSRNGLQKLRNSLMMQITDTEHMTLMRDAFPLLNDPKILAENL RIWRTDSTKIAYDFIQEGLRDGSITTEYPQEAAELFSLLFNYWLAPNFYPITTLSEFKHR IHGLGLIMDSLGVPLIDHDSDMEDRLAEGFFLLASNPQ >gi|222441570|gb|ABXX02000003.1| GENE 160 175446 - 175679 164 77 aa, chain + ## HITS:1 COG:ML1736 KEGG:ns NR:ns ## COG: ML1736 COG0695 # Protein_GI_number: 15827934 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Mycobacterium leprae # 1 72 2 73 80 84 50.0 5e-17 MNITLYTKANCPQCTATKRQLDKRGLPYTTVDITANARISDRLRNEGWRQMPVIIADDES WSGYRPDKIHELEARCR >gi|222441570|gb|ABXX02000003.1| GENE 161 175766 - 176110 259 114 aa, chain + ## HITS:1 COG:YPO2650 KEGG:ns NR:ns ## COG: YPO2650 COG1780 # Protein_GI_number: 16122859 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Yersinia pestis # 1 105 26 130 134 133 60.0 8e-32 MRIPLRPDEPELHVDESYVLLTPTYGGGTIGKAVPVQVKRFLNDERNRSGIIGVIASGNT NFGEAYGIAGDIIAAKCRVPLLYRFELMGTSEDTATVREGLRRFFDEYTQQEQR >gi|222441570|gb|ABXX02000003.1| GENE 162 176113 - 178296 1572 727 aa, chain + ## HITS:1 COG:MT3137 KEGG:ns NR:ns ## COG: MT3137 COG0209 # Protein_GI_number: 15842617 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 727 1 725 725 1007 68.0 0 MPEDSTTPHAATDVIASYDRAHDWHSLNAMLNLYDKQGRIQFDKDIQAVREYVEKHVLPN TVRFNSTQDRLSRLIADGYYDESVFAQYDAEFLDRFYRNVDDCGFEFDTFLGAFKFHRSY ALKTFDGKQYLENFPQRAAAVALALAAGDHAAAESYFEELISGRFQPATPTFLNLGKAQR GEAVSCFLVRIEDNMESISRGINAALQLSKRGGGVALLLSNLREAGAPIKRIKHQSSGVV PVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIMHFLDTKRENADEKIRIKSLALGVVI PDITFELAKRHEPMALFSPYDVERVMGRPFADVSISENYRNMVDDERIGKTYIDAREFFM TLAELQFESGYPYMVFEDTVNRANPIDGRIAMSNLCSEILQVQEPSTYHEDLSYNHVGRD VSCNLGSLNIAKAMDGDLGRTVERAIRALTSVSEHTDIACVPSIRRANDEGHAIGLGQMN LHGFLARESIMYGSPEALDFTDMYFMTVAYHAYRASHELAVERGTRFAGFERSAYAKPAG AGNYFDKYTNGERSLAPKTGKIASLFARRGIHIPNEDDWRRLRDDIIRDGIFNQYLQAVP PTGSISYINHSTSSIHPIASKIEIRKEGKIGRIYYPAPYMTNDNLQYFADAYEIGWKAIV DTYAEATRHVDQGLSLTLFFPDTATTRDLNKAQIYAWRKGIKTLYYIRIRQQALSGTEVQ GCVSCML >gi|222441570|gb|ABXX02000003.1| GENE 163 178327 - 178467 101 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRLVYRAMLRLTAPDEYRRLYGRDDKTTIRKDDHHGADIRTSTED >gi|222441570|gb|ABXX02000003.1| GENE 164 178433 - 179425 1045 330 aa, chain + ## HITS:1 COG:ML1731 KEGG:ns NR:ns ## COG: ML1731 COG0208 # Protein_GI_number: 15827930 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Mycobacterium leprae # 10 330 5 325 325 535 81.0 1e-152 MAPISVPRQRIKLIDRVSAINWNKLEDDKDLEVWDRLTGNFWLPEKVPVSNDLPVWRTMS EAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIF STLCSTRQIDEAFSWSEENEYLQRKARIVLDYYEGDSPLKRKVASTLLESFLFYSGFYLP MYFSAHAKLTNTADVIRLIIRDEAVHGYYIGYKYQKGLELVSEDKRGELRDYTYDLLNEL YDNEVEYTRSLYEPVGLTQDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPN ADENHDFFSGSGSSYVMGKSVETDDDDWDF >gi|222441570|gb|ABXX02000003.1| GENE 165 179491 - 182007 1353 838 aa, chain - ## HITS:1 COG:BH0714 KEGG:ns NR:ns ## COG: BH0714 COG0178 # Protein_GI_number: 15613277 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 13 836 5 818 820 436 33.0 1e-121 MEQSSGAFPPSRIEVRGACVHNLKNVDVDIPLNKLVGIAGISGSGKSSLALGVLYAEGSR RYLEALSTYTRRRLTQASRAQVVDIRHVPAALALHQRPSVPGVRSTFGTMTELLNSLRLL FSRCASHVCEHCGERNRPTMNVAAELPIRCTSCNQLMHPPSAEQLSFNSAGACPTCSGTG IVRTVDRASLVPDETKSIDAGAVLPWGSLMWDLMKQVCGAMGVRTNIPFNQLTDAERDIV FNGPAVKKHILYKPKKGNDFAELDFTYFNAVYTVENALAKAKDEKGIKRVSRFLSEQPCP DCSGTRLSQQARQPQILGINLAQATAMTLDETIRWVRSVPKSLPQEMRAMATAICESFED TAERLVELGLCYLSLDRAGATLSTGERQRVQLARSVRNRTTGVLYVLDEPSIGLHPANVD GLLGVMRDLVADGNSVVVVDHDTRVLAAMDHLVEMGPTAGAEGGHVIAQGAVADVMTAPG SQIAPFLRDGGKIHERARPQIDLDAMFAKGRIHLETNTVHTVHPLLVDIPRGRLTVVSGV SGSGKTTMVLETLVPALRSAADGTVSPSSIRLIDADGISKVELIDATPIGANIRSTVATY CGVHDDLRRAFAKTSDAHKKNLKPGAFSYNTGKLCCSTCDGTGTISLDVQFLPDVDVTCP DCHGTRYAQTADDIRLVCADSVARSLPELMLLSVDEMMPLLDFLRPVRSKLATLHELGLG YLTLGEPTPALSGGEAQRLKLASEMGRGQSGSVFVFDEPTIGLHPLDVLVLLRVFDSLVA SGATVVVIEHDLDVIANADYLIDMGPGGGMAGGRIVCEGTPETVRACPDSVTGRYLRG >gi|222441570|gb|ABXX02000003.1| GENE 166 181995 - 182156 154 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351967|ref|ZP_03742990.1| ## NR: gi|225351967|ref|ZP_03742990.1| hypothetical protein BIFPSEUDO_03572 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03572 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 53 1 53 53 102 100.0 1e-20 MIVPYPLQYLCGGKHAGRGTLFVMVLLQLWYLIHIFDRNGGDAIVFHGYRQRT >gi|222441570|gb|ABXX02000003.1| GENE 167 182372 - 182602 258 76 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0041 NR:ns ## KEGG: BBPR_0041 # Name: not_defined # Def: permease MFS superfamily # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 2 58 353 409 428 81 77.0 1e-14 MKSVSTVHGLALSAWAFAGLSGNQLASFVVSHATDAAHRYSALIPIITVLYAVALASIIA VTLATKGKGANALSSR >gi|222441570|gb|ABXX02000003.1| GENE 168 182616 - 182795 273 59 aa, chain - ## HITS:1 COG:no KEGG:BLJ_0028 NR:ns ## KEGG: BLJ_0028 # Name: not_defined # Def: major facilitator superfamily protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 43 134 178 451 65 88.0 6e-10 MGIGLGVGYLTPVKNLMLWFAKGLATGIAVAGFGLAKAIAGSISVILTVDAVFNAAGAA >gi|222441570|gb|ABXX02000003.1| GENE 169 183185 - 184180 715 331 aa, chain - ## HITS:1 COG:L15267 KEGG:ns NR:ns ## COG: L15267 COG1073 # Protein_GI_number: 15673556 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 82 327 78 317 320 160 37.0 2e-39 MKHDNDTIVRDICIATGAVTAACIASLATTAKYLFHFCIDTQWKRSVFHQSLIAPERIEK LQQGEAQEAGEWFAQAKQPVTITSDDGLRLHGWLFDPDCTAPKPHLYAICMHGYTGVPEE TAKWAHRYARMGFTVLVPSQRAQDLSEGRYVGMGWLERNDLLNWIDLIASSDADARILLY GGSMGAATVMMTTGDPRLPRNVVSAIVDSGYTSARMVFIDSLRHSSRLPKPLAAVCVDAA GLFCKHYAGYDFSEATCLQSLRHTVIPMLFIHGEQDDIVSSRFLKINYEACSSIDREKLM VPDARHMEASVVDPELYWNTVNAFIKRAFEL >gi|222441570|gb|ABXX02000003.1| GENE 170 184466 - 185062 917 198 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25 [Bifidobacterium adolescentis ATCC 15703] # 1 197 3 195 204 357 94 4e-97 MATTITLEGAARTEFGKGAARRMRVANLIPATVYAGGEEPVFVQLPMKETTLSLRHTNAL FTIKFGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVAFV DIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDVEDPEESVVTVEVPE DAADEAAPVETAPAENAE >gi|222441570|gb|ABXX02000003.1| GENE 171 185411 - 185602 148 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIQMFLSSAPSHFVSRALFPCIVSHASRYSIGMLMHATYLLESCVRSLSISVISRGKPT TVK >gi|222441570|gb|ABXX02000003.1| GENE 172 185525 - 186034 391 169 aa, chain + ## HITS:1 COG:BH2987 KEGG:ns NR:ns ## COG: BH2987 COG0239 # Protein_GI_number: 15615549 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Bacillus halodurans # 33 163 8 132 134 71 32.0 9e-13 MTDDAWKQCTRDEVRRCGREKHLNKHIIRLDVVTVVFLGGCVGTGLRYASSSIADVGGFH VGTFAANMVACFVYAALSAWLGSSSLLKGRAKEYVNRGFGMGMCGGLSTMSTLALEEFMM IDDHAIPGVLTYCCATFIVGFSLAYAGALCGSWLAERNKDEHADKEAIR >gi|222441570|gb|ABXX02000003.1| GENE 173 186031 - 186399 223 122 aa, chain + ## HITS:1 COG:PH1502 KEGG:ns NR:ns ## COG: PH1502 COG0239 # Protein_GI_number: 14591286 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Pyrococcus horikoshii # 3 122 7 121 123 65 40.0 2e-11 MSAMLAIGVCACGGVGAAARYICDSYIKALWRKTFPLSTFAINVVAGLLAGLVAGLFAAN TISPDCRLLLATGFLGGFSTFSTMMNETVTLLRNGKIACFIGYALASIVVPVMAVACGYW LA >gi|222441570|gb|ABXX02000003.1| GENE 174 186485 - 186898 508 137 aa, chain + ## HITS:1 COG:CAP0110 KEGG:ns NR:ns ## COG: CAP0110 COG0454 # Protein_GI_number: 15004813 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 132 1 132 137 199 68.0 2e-51 MGITYTDEKKFTKERTQQLFRSVGWVSGKYPERLYKALMGSSTVFSAWDGDRLVGLVRVL DDTEMVAYMHYVLVDPEYQGHGIAGHLVGMVKERYRDYLYIEVMQEESKNATFYQKHGFS IMEDGAAMQIRNPGERR >gi|222441570|gb|ABXX02000003.1| GENE 175 186842 - 187096 166 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAEGAGNAAFPTLVAFCVFRSSLPVMLRSFRVKHASQPSDVLVDTRKSNTPVIRRGNKIV GVTMLVSAAFSWIADLHGRAVFHD >gi|222441570|gb|ABXX02000003.1| GENE 176 187459 - 188586 1804 375 aa, chain + ## HITS:1 COG:XF1999 KEGG:ns NR:ns ## COG: XF1999 COG0115 # Protein_GI_number: 15838593 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Xylella fastidiosa 9a5c # 19 371 5 357 362 376 50.0 1e-104 MTEQNHHDPAELDKLTEKFTVLPNDNPASDAKRAELIDKPAFGQVFSDNMAHMTWTKGEG WGDRRIEPYAPLKMDPGASVLHYAQECFEGLKAYRHADGSTWLFRPDANAERFQNSAKRL YLPELPIDDFIGSVAALVKRDVNWVPTRREYTLYMRPFMFASEPFLGVRAPQEVDYCVIA SPSGPYFPGGVKPVSIWVEDKWFRTGPGGTGFAKCGGNYAASLLGEYTGIDHGCEQVCFV DAATKTYLEELGGMNMMVVHKDGHVETPSLTGNILPGVTRRSLIQLIQDNGHDVVETMIA LDQLLEDIKSGEVTEVFACGTAAIITPIGRFKSEKFDVTVADGNSGEFTVNLRNQLLGIQ LGEIEDPHNWMWKVC >gi|222441570|gb|ABXX02000003.1| GENE 177 188777 - 189526 681 249 aa, chain + ## HITS:1 COG:PAE2348 KEGG:ns NR:ns ## COG: PAE2348 COG2860 # Protein_GI_number: 18313279 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrobaculum aerophilum # 14 187 10 189 211 88 33.0 1e-17 MSVALESNAFFWGIEYLATFCCGMCGGLAAVRKGYDIFAILVTTWLTALGGGIIRDVLLG IAPPVGVSDKGLVIVALLASVAVAVCHPEINRLKWSMLSLDALALGLYAVNGTSKAMMYH TSGMTAVFLGMFTALGGGLIRDMLINEVPMVIRDKHWYAVPSAVGCVLTVLVCKGVDAGI VSFPAEVVLDLLIVALMVSMRLVSVIFDIQLPGALVRHNTYLPSEAKYLKRPVIHSDKDS DKRKCDKRR >gi|222441570|gb|ABXX02000003.1| GENE 178 189624 - 189884 400 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025763|ref|YP_909608.1| 30S ribosomal protein S20 [Bifidobacterium adolescentis ATCC 15703] # 1 86 1 86 86 158 97 3e-37 MANIKSQKKRVLTNEKAHKRNVAVKSSLKTAVRATREAIAAGDKSAAEAAYKVAAQKLDK AAGAGVIHKNQAANRKSGLAVAINAL >gi|222441570|gb|ABXX02000003.1| GENE 179 189906 - 190112 91 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225351982|ref|ZP_03743005.1| ## NR: gi|225351982|ref|ZP_03743005.1| hypothetical protein BIFPSEUDO_03587 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03587 [Bifidobacterium pseudocatenulatum DSM 20438] # 20 68 1 49 49 79 100.0 1e-13 MRDDAEIANQRLIGETGLVMLLAHAILLLKYSTQTILTASIGMVSRDTPKPVGNLSARHV IIIVCMSL >gi|222441570|gb|ABXX02000003.1| GENE 180 190041 - 191921 2593 626 aa, chain + ## HITS:1 COG:MT2476 KEGG:ns NR:ns ## COG: MT2476 COG0481 # Protein_GI_number: 15841921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Mycobacterium tuberculosis CDC1551 # 10 615 46 653 653 877 70.0 0 MGQQHNQPGFTDQSLIRNFCIIAHIDHGKSTVADRILQLSGIVPEREMRDRFLDRMDIEQ ERGITIKSQAVRVPWTFDGTEYTLGMIDTPGHVDFTYEVSRALAACEGAVLLVDATQGIE AQTLSNLYMAIDHDLAIIPVLNKIDLPSAEPDKHAEEIAGLIGCDPSEVLRVSGKTGEGV TELLDRIVADVPAPTGDPEAPARALIFDSVYDSYRGIVTYIRMVDGELRSREKLHMMGIG MTHDPIEIGVISPDMMPTKALGAGEVGYVITGAKDVSQSKVGDTITSALKPAADPLEGYR DPQPMVYAGLFPIDNAQYPELREALDKLKLNDAALIYEPETSVALGFGFRCGFLGLLHME IVTERLSREFDLDLISTAPNVPYEVTAEDNSVHRVTNPSEFPDGKIKQIVEPVVAADIIT PKEFIGAVMDLCQDHRGQMGTMEYISADRVEMHYRIPLAEIVFDFFDQLKSRTKGYASLD YHEDGEQSADLVKVDILIQGEKVDAFSAIVHKDKAYSYGVMMTKKLRELIPRQQFEIPIQ AAIGSRIIARENIRALRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKMLGHVEVPQEAFI AALSTGDAGNDRDTKDKIRAAQKTEG >gi|222441570|gb|ABXX02000003.1| GENE 181 191921 - 193126 974 401 aa, chain + ## HITS:1 COG:MT2457 KEGG:ns NR:ns ## COG: MT2457 COG0635 # Protein_GI_number: 15841901 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 2 392 21 385 390 280 40.0 3e-75 MFEAYIHVPFCIRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMSIVHDWQIAHGVNEP EAATVFFGGGTPTILKASDLVAMLNAVRDTWGIADNAEITTEANPDTVNADYVKELADGG FNRISFGMQSAVPSVLKTLDRTHTPANVAAGIAAANAAGMRSSVDLIYGAPGESLDDWRV SVRTAIDLGVDHISAYALTVAPNTKMGRQIAVGTLPTPDDDDEATKYEIADDLLSAAGLE WYEISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGNVMDVEQSTSAETSETVKSSGL RSWDIAHPRMWGQAINDDNVPWSGSERISNEENLEEIIMLGLRIREGLDLSRLGNMVDMA RIQPMEDEGLIVIRDGRVIPTRTGRLLNDTVIERFFDACSL >gi|222441570|gb|ABXX02000003.1| GENE 182 193280 - 194077 759 265 aa, chain - ## HITS:1 COG:BH2491 KEGG:ns NR:ns ## COG: BH2491 COG1028 # Protein_GI_number: 15615054 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus halodurans # 10 264 2 246 246 160 38.0 2e-39 MNQQSEHRTLTGKTAIITGASRGIGAAIALRLAQLGANVTIDYLSNDERAQHTKQHIENE ADAQGRVITCKADVTDETQVNELAQTTANTFGGIDILINNALSHYSFDPRNRNTFSNTSW NDYATQLEGCLKGTYNTCTTALPYMRRQSWGRIVNISSNLVDSPIVPYHDYIAAKGALIG FTRSLAQEAGAWGVTVNAIAAGLTVGTDSSRATTEDVRERIIAQTPLGRLATADDIAGGV AMLVGEDARFVTGQTLHVDGGLTMR >gi|222441570|gb|ABXX02000003.1| GENE 183 194094 - 195593 1127 499 aa, chain - ## HITS:1 COG:no KEGG:BAD_0934 NR:ns ## KEGG: BAD_0934 # Name: not_defined # Def: acyl-CoA reductase # Organism: B.adolescentis # Pathway: not_defined # 1 499 1 504 504 732 71.0 0 MSVIDIFHAPRGFVFEDFETRGVLTDRGEVTLRYPVLTPETVQDLCETTRCNRSQTLAAY SVEHIVDIIGEAVELWTNPDYEGRQIAESLIPSITGYDATMTRIELKRYMRMFRRRELLR FLDDELPSPRMLDEYRPNKSGGYTRLYGPDLTFHVFSSNVPGIPVWSMTMSLLTKSAIIG KSSFDEPLMPVLFARSLTQINPDLADVLAIVPWRGGTVELEDVAIGEANAVIAYGSSHTT EAIRPRVSAGKPFLSYGARIGFSLIGREALRADTHVQTVHRMAVDVATYDQQSCLAPQTI FVERGGAISPAQTAELLASELDSQQRKYPRSTPSDTESLAIRRARSQTEMQALFMTSMTP DSAAQADPQAPFVIESPQGTDWTVLYYPNTSSLPSLGTPLNRTINIVAVDQLKHALPTLK PYREWLQTCAIATSSSRLFALAQQVGEYGIDRICPVGEMNRAKSGWHHDGGFNILDLVRA VDIERNTDRYADTFDIDYE >gi|222441570|gb|ABXX02000003.1| GENE 184 195590 - 196714 1192 374 aa, chain - ## HITS:1 COG:no KEGG:BAD_0933 NR:ns ## KEGG: BAD_0933 # Name: not_defined # Def: acyl protein synthase # Organism: B.adolescentis # Pathway: not_defined # 3 374 9 380 380 660 83.0 0 MTSMSLGADAQEVKANVLEFIEKYGCEVAPDEAFDALAHKIFAFQFAHNMQYRAYCMSRR VTPQMLSDWMDIPPMPVDGFKMLTLTSVPEDDCEAVFMTSGTTHPGQRGRNYHPDLEVWD ASMIGPFRHFIMPDRERMRIAVLSPAWEMNHNGSLARYLTRAVEQCGSEGSGFFFHEDGL DFAGVEKFLDQSVADGEPVMLMGASSAYLYLLDYLAERGKTYALAKDSRVFDTGGFKSTK TDMTVDDLYAKFLEVFGVARTHCVNMYGMTELSSQIYDQNLLSYYTDGSSNYLKATPSWV RSVFLDPATLTPVADGEQGVIAHYDLANWNSCLAILTEDLGVRTDSGYELNGRAKGAEAR GCSIAVDEVMAANA >gi|222441570|gb|ABXX02000003.1| GENE 185 196760 - 198193 1707 477 aa, chain - ## HITS:1 COG:PAB1838 KEGG:ns NR:ns ## COG: PAB1838 COG2233 # Protein_GI_number: 14520997 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Pyrococcus abyssi # 50 455 17 426 427 177 30.0 5e-44 MLRTVRVRVFSVLTAGVWPCVSWKEKGFGVSDASQVPEQLGSGSKKLTPKNVLLGLQHVL VSNVWLDPVFVAGAIGLPLALSSNMVNAIFIVSGLVTLIQATRLVRLPIVQGPSAAFDAL MIAAGTAGSLAAAGTSIFVSSLIFLVLCLTRVIEKMRFLFAPMVSGVIIFLVGVSLSSFT LSEFLGGAPGDDGFADPKTLAVSIVTCVLVVALSQFGKGMVRALSYLIALVAGTALSMVF GMADFSGVASKPWFGLPQIMPYGGFDFDAAVFVPFFIAYMVAIMEALGVYQAASEIQGVK LEDRQVRYGLAGEAAGSAISSMIGGFTTTAYPQNVALLKVTDEGKTRTRVPVIIAGVVFV VLGFIPKAGAVLSLIPSPVIGGIFLPAAASLISTGFNTLRKVESNDRSQAVIGLSLLLGI ALPSALSGLEGGAHVFFSNSILVGAFCVVILKALLIDLPNLINRRKGNSEAEVPSQI >gi|222441570|gb|ABXX02000003.1| GENE 186 198492 - 203063 5803 1523 aa, chain + ## HITS:1 COG:ML0061_2 KEGG:ns NR:ns ## COG: ML0061_2 COG0069 # Protein_GI_number: 15826907 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Mycobacterium leprae # 397 1192 8 812 812 969 60.0 0 MTFHAPLDLTIHDSQGMYDPGAEHDACGVGMVTTLNKRPERKIVDDAIEVLVNLNHRGAV GAEENTGDGAGILMSMPDEFMRATAGVELPEEGHYAAGIAFLDRDIATSGQQEQAIAKIV REEGLEVLAWRVVPTNPDGLGLQALASMPAFKTLVVADPEGQLAGIELDRKTFRIRKRVE HEVGIYFASLSARTITYKGMLTTMQLKPFFLDLSDERMKAKIAIVHSRFSTNTFPSWPLA QPFRQLAHNGEINTIQGNRNWLSAREGRLSSELLGEFKPLLPIATPGYSDSGTFDECLEL LHLSGRSMPHAISMMLPPAWEKNDQLDPDVRAFYEYNNTLIEPWDGPAHIIFTDGTQVGA LLDRNGFRPGRWQLTDDGYIVLASETGVLPENAEEHIVSKGRLEPGKMFLVDTKEGRIIP DEEIKKSLASQHPYRQWVEGNTVEMSQLPKREHVNHSGQSVQRRQRAFGYTEEDLKLLLA PMANTGKEPLGSMGNDAPMAALSSRSRMLFDYFTQKFAQVTNPPLDWEREKIVTCLESAI GPEPNLLADSELHAKKILIPLPVLNSDEMAQLKRLDRAKILGGYYKPFVVKGLYQVAGGG KALKERLDEIFQEVDEAIENGSNFLVLSDRDSNYTWGPIPSLLLTSAVQHHLLRRHTRTQ ISMVVEAGDVREIHHVALLIAYGAAAVNPYLAFESVEDLSRKGYLNVDAETAVKNLTNAL STGVLKIMAKMGVSTIMSYRGAQLFEAIGLNKDVIDEYFTGTTSRVGGVGLDELAEEVAI RHRVAYPSQWTARPHRNLRTGGEYKWRRTGEDHLNDPEAIFLLQQSTQRGDYDMFKKYSA HINDTSNRLMTLRGLMKFKSGRKPIDISEVEPASEIVKRFSTGAMSYGSISQEAHETLAI AMNTIGARSNSGEGGESEDRINDPLRYSKIKQIASARFGVTSDYLVHATDLQIKLAQGAK PGEGGHLPGAKVPPWIAKVRHATPGVELISPPPHHDIYSIEDLKQLINDAKMANPKARVH VKLVSEFGVGTIAAGVAKCHADVVLISGYDGGTGAAPLNAIKHAGTPWEIGLSETQQTLV LNGLRSRITVQCDGELKTGRDVVIAALLGAEEFGFATAALIVEGCVMMRACQKNTCPQGI ATQDPELRARFKGKPEHVINFFMFIAEEVRELLAQLGFRTLEEAVGHVECLDQNEAIKRW KSDGIDLSNVLMQPGPVPGTILHQTIEQNHELDKALDNKLIELAQPALEKKEPVRIEMPI RNVYRTLGTMVGYEITKRYGEEGLPDDTIDMTFHGAGGQSIGAFIPRGETIRVYGEVNDY AGKGLSGGRMVVRPEAGITFDPHENVIAGNVTGFGATSGQMFVAGRAGERFGVRNGGATF VVEGVGDHGCEYMTGGTVVILGPTGRNLGAGFSGGHVYVLDLDMKQVNPAAAANGALLFE PLDSESNEIVHGLVKQHAEETGSAFAAGLLADWENASKRFTHIVPKHFLAMQKAMKNAEE NNIDFNTPGVWEQVYEQVMEGAR >gi|222441570|gb|ABXX02000003.1| GENE 187 203065 - 204612 1870 515 aa, chain + ## HITS:1 COG:MT3973 KEGG:ns NR:ns ## COG: MT3973 COG0493 # Protein_GI_number: 15843490 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 1 511 1 487 488 484 51.0 1e-136 MGDPRGFLKVRTRRELAERPVEERIKDWFDVHAESGLQPWTTEQAARCMDCGTPFCMSGC PLGNIIPEFNDLVRQEKWEDAYNRLSETNNFPEVTGRICPALCEAACVLGIHQPPTMIKN DECTIIDQAWELDYVKPLPPQRLTDQTVAVVGSGPSGLACAQQLTRAGHTVVVYERDDAI GGLMRYGIPNFKLDKRLIDRRVEQMEAEGTVFRTGVEIGKDISWDDLRSRYDAVVVAIGS TVPRDMKIPGRELKGIHFAMEFLPDATRRVYGVKPVNDITAEGKHVVIIGGGDTGSDCLG TSIRQGAKDVTVLQIMPQEPSERPANQPWPTFARLYQKTSSMEEGFETQRAEYVYSTDSV NFVGTEEEQAKVKVEHSTATEGFVADENGHVTGLKVVNVAPGENGPFTRQPGTERVIPAD LVLISVGFLHPDTTTLVDQLPVDLDGRGNVARNDKFATSQDGVFACGDAGRGQSLVVWAI SEGRSCAAAVDEYLTGATELPAPIVASKRPMMLPR >gi|222441570|gb|ABXX02000003.1| GENE 188 204811 - 205272 462 153 aa, chain + ## HITS:1 COG:no KEGG:BDP_1080 NR:ns ## KEGG: BDP_1080 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 153 1 153 153 278 88.0 4e-74 MPNRAERRAQAKNNRRGVPQQYDQTHGRARSGMLDEYQLQEKSRRLQDGTDGPWKPTGGT IEETESLLTTSPNYTNPKMFKAPHSARQWFRVISWLLIALSAIAFLVIMWLPSHPMWLVA TVSIVFAVGVLSLFFTAGNPKHNPNLDQNGTAV >gi|222441570|gb|ABXX02000003.1| GENE 189 205309 - 205512 118 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEGCSPAFTCESRMTALFVPGLLTSLPAFLGKMQNFVTRMKQSGVSLKNCLTVVMEQLPD SKRRAQI >gi|222441570|gb|ABXX02000003.1| GENE 190 205509 - 206765 1646 418 aa, chain + ## HITS:1 COG:Cgl1093 KEGG:ns NR:ns ## COG: Cgl1093 COG0438 # Protein_GI_number: 19552343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 6 410 1 385 385 369 48.0 1e-102 MKVDILSREYPPKVYGGAGVHAEELSKVLAERVDVTVRAFDGPRAENEIPEIPGDNPKGS LKVVGYDVPKELQEANGALKTFGVDLQIADDVDADIIHAHTWYACLAGYLAKMLHGTPLV ITAHSLEPFRPWKREQLGGGYDLSSWAERDAYEHADRVIAVSAGMREDILSAYPNLDPDK VVVVHNGITMSQFETPSDDDPGWKVFERYNIDRNKPTLLFVGRITRQKGLPYLLQALHFV DPGIQIVLCAGAPDTPEIMNEVKTAFAKLDEERGNIIWIEEMLPKPELNALEHGCDAFIC PSIYEPLGIVNLEAMACGLPVVASATGGIPEVVVDGETGYLVPVDQLHDGTGTPTNPDKF VHDMADAINRIMADPEKAKQMGQAGYERARDHFSWESIADKTVKVYEDVLAEQGKTAE >gi|222441570|gb|ABXX02000003.1| GENE 191 206871 - 207722 1027 283 aa, chain + ## HITS:1 COG:MT3126 KEGG:ns NR:ns ## COG: MT3126 COG1119 # Protein_GI_number: 15842605 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Mycobacterium tuberculosis CDC1551 # 3 276 17 270 287 191 40.0 1e-48 MPEQNIALELADVEFRRRGRVILTKVNLKINKGEKWVLFGPNGIGKSSLVQMMSTRGFPS EGTVDILGNRLGKVDVFSYRNRIGLSSAELSRAFPPQEDPLDAIVTALTATTGRWRDTYT DEDYAKARSLMREFGIEYLEGKMMFKLSEGERTRVLICRALMADPDLLILDEPTTGLDLG GREIALRALSRVGAEQSDRAVVLVTHRLEEIPQGFDHVAIMGRITGSEADAYADNVAGND PAPGTIVYSGDLEHGFTSERLSEVFGLELEVTHANGRWSAYAR >gi|222441570|gb|ABXX02000003.1| GENE 192 207834 - 208889 1042 351 aa, chain + ## HITS:1 COG:ML1313 KEGG:ns NR:ns ## COG: ML1313 COG2519 # Protein_GI_number: 15827681 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Mycobacterium leprae # 4 292 5 270 281 236 44.0 4e-62 MRRGPLTAGEKVQFTDRRSNKITDQLVPGGVTQTSHGIILHDDVIGQSEGSVVVTVSAKR EAQINQDHPERDANKPWKGTRAIGGWQFAVMRPRLADYVLSMPRGAQIMYPKDIAQVIQL GDIRSGMNVLESGAGSGAMSVNLLDAVGERGRLTTIEMRSEFARVAEANATVYFGGRPAW WDLKIGDFDSVAATLPEHSFDRIMLDMLDPWNRLEQAYRVIAPGGVLVAYVTTTTQLSRM AEALREAGCWTEPDIQETLERDWKVQGLAIRPDHQMIGHTGFLMVSRAMAPGFQALRKRD RATKDTTTDIDSLSAEERAEQLEDLELRDISDRKLRKVLRDLDAQVEAIGD >gi|222441570|gb|ABXX02000003.1| GENE 193 208981 - 209538 615 185 aa, chain + ## HITS:1 COG:SMc00468 KEGG:ns NR:ns ## COG: SMc00468 COG2062 # Protein_GI_number: 15965558 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Sinorhizobium meliloti # 17 158 9 147 178 69 31.0 4e-12 MGTSLKKVAKKAKDYKYVLLVMRHAKTEPFGDGGDAGRELTDKGRKQAKAVAKGLAAHKM VPTRIACSSATRARQTCDRMLKVFGDDPKVDYRQSLYEGGVQSVFDELAQTKEKHRELLV LGHEPTVSIACQWLASSESDAMLLDMLNLGMSPASLAVFGSNEPFNQWQLHSGELIALLT AKDFE >gi|222441570|gb|ABXX02000003.1| GENE 194 209700 - 212006 2998 768 aa, chain + ## HITS:1 COG:SP0585 KEGG:ns NR:ns ## COG: SP0585 COG0620 # Protein_GI_number: 15900494 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Streptococcus pneumoniae TIGR4 # 5 766 3 749 749 854 58.0 0 MSVLTSVSGFPRIGQNRELKKIIEAYWKGVATLDDVRATAKELRAKHWKLQQEAGIDLIP SNDFSYYDQMLDTAILLNVIPQRYQRLAFDNPEETLFAMGRGYQGDKGDVTALPMKKWFT TNYHYLVPEVDEATDIKLNSTKPFDEFNEAKALGITTKPVLIGPYTFLKLARNPQAEELE YDKGLVNAVAAVYAEVVAKFAELGAEWIQIDEPYLVLDKEPGDVELFKSLYTKILPARDG KIKVLLNTYFGHIADVYETVNLLAFDGIGLDLNEGKDENLAAVEKFGVAESTTIFAGVVN GRNIWRNDYAVSLGLVDALKKVTDNVAVSTASSLLHVPFSTEGEDGLADDVRKHFAFAVE KLGELHDLAVLADASEEDKKASGALAANQALFDGTRVAADKNVAERLAALTDSDFVRQPA RAERQKAQREALNLPLLPTTTIGSFPQTKEVRAERARLRKGEITKTEYDEYMKAQIDACI KHQEQIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRA NPITVEWSAYAQSRTSHVMKGMLTGPVTILNWSWPREDITHEQQTQQLALAIRDEVLDLE AAGIKVIQIDEAALREKLPLRKTDWHKKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFN DIITDIDAMDADVISFEASRGDLVVLDAIHDANFETEAGPGVYDIHSPRIPSEAEIEERI YEILKKMDVEKVWINPDCGLKTRGNAETWPSLENLVAAAQAVRAKLTK >gi|222441570|gb|ABXX02000003.1| GENE 195 212036 - 212875 971 279 aa, chain + ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 6 275 4 273 282 234 43.0 2e-61 MHSPMFSLEVFPPKRTSPVGTIYDTLDGLQGLDPDFISVTYGTGKSSDRTLTARIAHTVS EYGIPSVAHLTAQYLNKDDVDQALDMFEQAKVSGVLALRGDRIDGAEPAGVFEHASDLAV YIRQQRPDMKIYGACYPEKHPQSATLEEDIDNLKKKVDAGVTHLISQLFYDNEDFLRFLD KARAAGIDVPIEAGIMPVMNAKSVLNMSNKCQSKVPEKLGIMLDKWGGDKALLKEAGIAY ASEQICELVARGVDGVHLYTMNHPCVSRRIWSNVKPFFV >gi|222441570|gb|ABXX02000003.1| GENE 196 212969 - 216028 2380 1019 aa, chain + ## HITS:1 COG:ML1630 KEGG:ns NR:ns ## COG: ML1630 COG1391 # Protein_GI_number: 15827859 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Mycobacterium leprae # 41 976 52 954 1004 577 38.0 1e-164 MQHKFGALDLIRAGLQDLDRARTLFDELHNDGIDDDRMRLLLATLEKACDPDIALSNLVD IIKVMQSQGKDFTNIIADENSFVRLITVLGVSDEMGKLMRFRPELVEAAANDACESHLYN HEQRRAHVLKSVGADPNDHTMPTASLPLAEAATALRKTYRKQLAAIMAQDATANDPIEIQ PRISTELSDLADAALEGALAIARHEVDGSEHVRFAIIGMGKLGAQELNYVSDVDLIYVVE PADMDTNGMALSRIGTKMATTLQRVCQSVIMGVAEPTLWQIDGGLRPEGKDGPLVRRLES HEAYYEQWAENWEFQALLKARPVAGDTDLGQAYMDMTRPFVWTASKRDNFVYDCQQMRKR VEDLIPNPLKDREIKLGRGGLRDVEFTVQMLQLVHGRSDEALRTSSTLESLQALAEGGYV SRKQAKKLSWDYRFERVMEHRQQMWALKRTHLFPDLGKANAGGLERKRDITIDELNQNPE LRRLARAFHMHPEELVNKYDETRREVRHLHMDIYYRPMLPINAGLDDEQVELSTKATQER FESIGFADADAAMRHVTALTAGISRAAKINRILLPAVLQWLGEGQNPDMGLLNWRKLEEN FGSESGYLGFLRDSPSAAQRLCHVLSNSRFLGDALNKSVESVTWLGNDDSLQPRSRESLD IQTKATLERNAGNINDFANSIRAMRRHEIERIGLAWMSGVIDDEASLAGMTDVYDAAIEA SLQWAIQHRINDIQIDEAPAAIAIIGMGRYGGREVNFSSDADVIIIYRPAEGADDDQANL FARKVQEDLRAILQGPTTFEPKIELDMDLRPEGKNGPLVRSYASCEEYYRSWASTWEHQA LLRARYAAGDASLAEDFLMNIADPLRYPKIDLTETQIAEIRKLKARMEAERLPRGVRRDR HLKLGKGGLSDVEWTIQLLQLQHAGDNANLRVNGTLQALNELEHRKLISAGDAVVLRKAW RMCTAARNGSYLWSGRVNQADILSGRFIFAGRHRRVSRLRCESRPTFRKRPARRDTQSP >gi|222441570|gb|ABXX02000003.1| GENE 197 216272 - 217285 1086 337 aa, chain + ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 20 321 4 305 307 371 59.0 1e-102 MKGEPLSSVLEQAVETPMVGKSVITLDDLSIRQIQELLHKAQYIDSHRKEVAHTCDGRVL ATLFYEPSTRTRLSFETAMLRLGGKVIGFAGAQLASVTKGETISDTLKTVSNYVDVVAIR HPKEGAALVASRAASVPVINAGDGGHMHPTQTLADLATMQSRFGRVNNLTVGLCGDLTFG RTVHSLIETLCRFGNVNFVLISPDELKTPQYVLDRINATDSCSYTEVKDLVSVIGDLDVL YMTRVQKERFFNEDDYLRLRDTYILDEAKMAYAKKDMAVLHPLPRVNEIAVEVDDDPRAA YFEQVKNGMLMRMALESSVVGDELPGYEPLESKEVAA >gi|222441570|gb|ABXX02000003.1| GENE 198 217285 - 217710 622 141 aa, chain + ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 1 137 2 136 146 113 47.0 9e-26 MEVTSIQNGIIIDHVPAGTALKVLEYLKIDPAKTKLALIMNTDSHMFGTKDIIKIESEEE AETIDLDVLGLVARTATVGIVRGGKIVEKKQPTLPEHVVNIIKCVNPRCVTTTEPAVQMF HLVHSDRQEYRCDYCDEEAKF >gi|222441570|gb|ABXX02000003.1| GENE 199 217714 - 219135 1197 473 aa, chain + ## HITS:1 COG:aq_806 KEGG:ns NR:ns ## COG: aq_806 COG0044 # Protein_GI_number: 15606174 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Aquifex aeolicus # 18 466 37 420 422 219 33.0 1e-56 MTLTLHDIKVWNTGEVIDLIVPSDADETVDASAMTIAPGFEDPHVHFRDPGQTYKESMVS GCAAAASGGYTNVLIMPNTVPAMDGVKVTAGEPGASEVLDAGFDTVIDYLQHYEQAHDVT LPVRYDLCVCASKGRAGKEATDVADWIGYLPEHDDDNKDAYQLCHPVTAISDDGSAVTPE ILDQVFDNVKKSGLYLIEHCEHHDTGAVNEGPVSRELGVPGIPEDTELKIVERDIEMARK TGVHVHFQHVSTAISFDAIRKAKAEGLPITCETAPHYVALCDEALLKYGTLAKMNPPLRS EEDRKATIAAVADGTVDLLATDHAPHTMEEKDLGFLDAPNGIIGLECAYGVCHKILVDGG FISDERLIELMSTAPAELMGHSKADVTALLDEYADAVPGDDDDTKRVLDLVKVPAEDRAD LVVLNTDEAWTVNPERFHSSARNTPFGGWQVTGRPLATIIGSKLVFSRINKED >gi|222441570|gb|ABXX02000003.1| GENE 200 219135 - 220097 1024 320 aa, chain + ## HITS:1 COG:CAC2652 KEGG:ns NR:ns ## COG: CAC2652 COG0284 # Protein_GI_number: 15895910 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Clostridium acetobutylicum # 1 319 3 286 286 208 38.0 1e-53 MDRLIEAIEAKQNPSVVGLDPTEALVPAQIVAGFAEEISEQVEDPAEAPSMQLSVAFFEF NRAIIDAVADIVPAVKPQIAMYETLGPAGIDAYTMTCEYAKQQGLYVLGDVKRGDIGSTA AAYAHHLSGIGLDDTAYDPWHEDAVTVNPYLGTDGITPFVDAATANDKDIFVLVRTSNPS SSELQELELASGERVYEHVADLVEGWGAETIGKNGYSRVGAVVGATHPEEGKALRARMPH TFFLVPGYGAQGGTAQGVAGMFDRDGMGALVNSSRGVIGAWKKSGKYSESMSADDALDLV AESAREAAKDMRDNLRAVLP >gi|222441570|gb|ABXX02000003.1| GENE 201 220173 - 220991 951 272 aa, chain + ## HITS:1 COG:CAC2651 KEGG:ns NR:ns ## COG: CAC2651 COG0543 # Protein_GI_number: 15895909 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 27 268 9 242 246 133 31.0 4e-31 MTTATTFVPTVAEATAAGFFPSRHEVEVVDNQELTDGVYRLTFRDEYIASHAKPAQFVDV YSNDPSKLMPRPFGVCETNGDEVSLMFAVVGKGTAEFAGLKAGDTIRVMGPLGNSFKTKE PANYVLVAGGLGVPPLVHAAQHIAGVEGAVSTAVFGYRNVRFGDEYAGKYADKVYSIDES EGNVITLLDRIEGELMDSGLKPVILTCGPLPMMKAVAAWAVKRDMACQLSLEQRMGCGYG TCVLCTVDTLDGRLKVCSDGPVFTRERLGWGE >gi|222441570|gb|ABXX02000003.1| GENE 202 220993 - 221943 1307 316 aa, chain + ## HITS:1 COG:aq_046 KEGG:ns NR:ns ## COG: aq_046 COG0167 # Protein_GI_number: 15605646 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Aquifex aeolicus # 21 302 6 290 306 240 44.0 2e-63 MIDDTQHENLYGSYEWKHPTQVAGVPWKNPVATASGTFQYAAVRWFYDVSQLGAVTTKGV SPVPWEGNPGIRTAEGPSSNINAVGLQNPGVDHYLEDDLPKLKAINATVIANVAGHCDDD YVEVVSKLNDSPADMLEINVSCPNVSAGGMSVGTDPVALSRLITRLRKLTDKKMIVKLTP NVTDITVPARAAVESGADALSMINTLLGMRINIRTGEPIIDHVTGGVSGPAVLPMGLVAV WKTRSALPNTPIIGIGGIDSGEKALEYLYAGANAVEVGAAALFEPTAPLRVARELDELLD ARPELADKLAKGETWR >gi|222441570|gb|ABXX02000003.1| GENE 203 221972 - 222667 1067 231 aa, chain + ## HITS:1 COG:CAC0027 KEGG:ns NR:ns ## COG: CAC0027 COG0461 # Protein_GI_number: 15893325 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 3 230 2 222 224 180 41.0 2e-45 MTESLDHRFTKFLLEAQALKFGEFTLKSGRKSPYFINAGAFNDGRKIATLGAFYAEKIAA EIEAGNLPNDIDTIFGPAYKGIPLGVSTAIALTSGHGMEVGYTFDRKEKKDHGDGGMMVG TQLTDGMKVLLVDDVMTAGTAVREVIPKLKAEADVEVVGLVLSVDRMEKTKDSDTSAVKA VEAEFGFPVFAIANVREIFEAGQHIETADGTAYVTDEIKAAADAYLEQYGA >gi|222441570|gb|ABXX02000003.1| GENE 204 222784 - 223707 1197 307 aa, chain - ## HITS:1 COG:SP0676 KEGG:ns NR:ns ## COG: SP0676 COG0583 # Protein_GI_number: 15900577 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 294 21 314 322 308 50.0 7e-84 MTLLQLKYIVKIVECGSMNEASHELYVSQPALSSSVKELENELGIEIFTRSSQGIALTVD GAEFLTYARQVLDQASLLEERYKNAKPRKQLCSVSTQHYMFAVEAFVEMINSIKSDEYEF TIRETRTKDIINQVANMLSEIGIIYLSDFNKDVIGKMLREKHLEFHPLFRAPLHVFISRN NPLAGKKKVTMDDLKPFPFIQYEQGEEGSFFFAEEAVWPEYSPKQINVTDRATILNFIIG LNGYTVCTGIDNGDLNNEKIVTVPLDTDETMLVGWITNERAKLSKAAENYLEKLKSVVAD HGYNLID >gi|222441570|gb|ABXX02000003.1| GENE 205 223790 - 223963 84 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352007|ref|ZP_03743030.1| ## NR: gi|225352007|ref|ZP_03743030.1| hypothetical protein BIFPSEUDO_03612 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03612 [Bifidobacterium pseudocatenulatum DSM 20438] # 13 57 1 45 45 79 97.0 7e-14 MPIWSTPIGTTLLLVGLTRQAGPLPLGEHLTGFVEHGLWGFQLCAILVKLQLVFSRP >gi|222441570|gb|ABXX02000003.1| GENE 206 224038 - 226677 2686 879 aa, chain - ## HITS:1 COG:Cgl1275 KEGG:ns NR:ns ## COG: Cgl1275 COG0422 # Protein_GI_number: 19552525 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Corynebacterium glutamicum # 311 879 10 586 587 808 68.0 0 MSNYPYASMRDSFDLSAYFVVGPQDCKGRPITDVIDDALRGGASFIQLRVKDADAKDLTD MARDIAQIIEDNNKSDSVAFVIDDRVDVVWQARSKGIKVDGVHIGQTDMEPREARALLGE DAIVGLSAETESLVKLINELPDGCIDYIGAAPLHVSVTKPEASVGGNDGSGRTLDEEQIN TICSASGFPVVVGGGVTADDMEMLAHSKAAGWFVVSAIAGADDPEAATRNMVARWKAVRG DTKHGYAPRVKAQKTAEINTDNTADGASGEKKFTNAKEAKAASKLAKQQRVDIAARDSKQ RDKAHIRKTTPVHFENEFGSYDLQVPYTEIKLSDTPGVGPNAPFKDYNTEGPKCDPKEGL APLRLDWILDRGDVEEYEGRRRNLEDDGKRAIKRGKASKEWRGRQHKPMKAKDHPVTQMW YARHNIITPEMRYVAEREHCSVELVRSELAAGRAVMPCNINHPEAEPMIIGSKFLTKLNA NMGNSAVTSSIDEEVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIGTVPMYQ ALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRFVPLTANRMTGIVSRGGSI MAEWCLQHHQESFLYTHFDELCEIFAKYDVAFSLGDGLRPGSLADANDAAQFAELMTLGE LTQRAWEHDVQVMIEGPGHIPFDTVRMNIEMEKAICKDAPFYTLGPLTTDTAPGYDHITS AIGGVEIARYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADIAKHHPHAIDRDN AMSKARFEFRWLDQFNLSYDPDTAIAFHDDTLPAEPAKMAHFCSMCGPKFCSMAISQNIR KKFGNAEAQEKLVADAQTIAAGMQEMSERFREQGGHLYQ >gi|222441570|gb|ABXX02000003.1| GENE 207 226792 - 227130 230 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIARCRLFGRRICCADFYGCQLTLAMRVRYDTHSSLPTLVLTNRFKGSGIRLSQLRWGAP LLYVLAMNLRPALDVTFIEAHRRVRPAVTFACIASIRVTPPPRNSQQTLLAG >gi|222441570|gb|ABXX02000003.1| GENE 208 227176 - 227721 394 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116492196|ref|YP_803931.1| acetyltransferase [Pediococcus pentosaceus ATCC 25745] # 2 175 3 179 185 156 45 2e-36 MLETERLTLRAWAETDAESLYSYAKDPDIGPIAGWPAHRSKEESLNTIRHVLNGKECYAI CERGSNNPIGSIELKLNGHTDMTDRDDECELGYWLGKPFWGRGYMPEAAKEVIRHGFVDL GMSAIWCGYYDGNLKSKRVQEKVGFVYHHTCDEVPVPLMHEVRVGHVNVLTKSRWQNLAA C >gi|222441570|gb|ABXX02000003.1| GENE 209 227795 - 228145 264 116 aa, chain - ## HITS:1 COG:CAP0105 KEGG:ns NR:ns ## COG: CAP0105 COG0394 # Protein_GI_number: 15004808 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Clostridium acetobutylicum # 1 116 10 125 136 121 50.0 3e-28 MHNSCRSQIAEALGKHLRGTDCDFYSAGVETKPQINQDAVRLMKELYGIDMEKTQYSKLI SDIPKPDTAISMGCDVGCPYIGKAFDDNWNLPDPTGHNDEAFIDVIRRIEENIMKL >gi|222441570|gb|ABXX02000003.1| GENE 210 228315 - 229436 1473 373 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 1 371 1 373 374 389 53.0 1e-108 MTYSKNAPFRADVVGSYLRPDELKQARADYAAGIIDAAELKAVEDRLITDLVAKQKAAGL HVITDGEFRRGWWHFDFMWGFNGVDHVAAAHRVAFHDEVTPADTATVTGKLDGHDHPFVE HFKFVRQFEDDNTVARQTMPSPAQTRFVLTGNKNAYPYDEFYKDDDELTADIVAAYRQVI ADLYAAGCRNVQFDDCTWTRLCDKSVRERLGWSDEDAARLQQENLDVINAVIADQPDDLV INTHICRGNFHSTWLSSGGYAPVAAKLFGEENVDAYYLEFDDDRSGDFAPLAEVSGDKQV VLGLVTSKRPELEDPEVIKARISEAAQYVPLDRLCLSTQCGFASTEEGNKLTEEQQWAKI ALVRSIAEEVWGE >gi|222441570|gb|ABXX02000003.1| GENE 211 229717 - 230370 715 217 aa, chain + ## HITS:1 COG:ECs0395 KEGG:ns NR:ns ## COG: ECs0395 COG0110 # Protein_GI_number: 15829649 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli O157:H7 # 9 206 3 196 203 192 44.0 4e-49 MNDCKEAAMTVPQRVLDTMNSGLIYTCDDEEMIKAQKEQMELLYDFNATRPSQMTQRNEI ARQLLGEFGEDAYIEPPLHANWGCNTYFSAHAYANFNLTLVDDGEVHIGEHTMIGPNCTI ITTGHPIRPDLREKVTQYSLPVTIGRNVWLGANVTVLPGVTIGDNSVIGACSLVTKDIPA NMVAFGQPCKVYREIGEHDDVYYWRDRMINPPYDQKQ >gi|222441570|gb|ABXX02000003.1| GENE 212 230661 - 230963 393 100 aa, chain + ## HITS:1 COG:BS_yvbA KEGG:ns NR:ns ## COG: BS_yvbA COG0640 # Protein_GI_number: 16080432 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 6 89 5 88 90 107 61.0 5e-24 MAGEGFKALSDPTRRRILELLRERDMTAGELAEQFNMSKPSISHHLTTLKTAGLVTDERH GQNIIYSLNTTVMQDLIGWFMGFMDGDGNVNQANDQTDNK >gi|222441570|gb|ABXX02000003.1| GENE 213 230975 - 231745 928 256 aa, chain + ## HITS:1 COG:MA3135 KEGG:ns NR:ns ## COG: MA3135 COG5658 # Protein_GI_number: 20091953 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Methanosarcina acetivorans str.C2A # 33 249 9 215 227 92 29.0 1e-18 MRGNNLNDLKNNINNAEDKNKTDSGEKIAPIGRNLCIALVALCVVNIIAHLACYSRLPEN VPIHWGADGSVNGYGPRAVTLILDVLPLLCLGLFLVIPKMDPKGENYMKASGLYRGFVIA FTLIMCGVTWFTEATAFGVIPATGGPVGLIVSVVLGALFVGLGNYLPRMRQNYTFGIRTP WALVDENNWKRTQRVGGISFMVLGVLLIVAGVVSSVVPVGDMLMVAIIVTIAVGAALVPY VYSYLLFRRSRGSRQN >gi|222441570|gb|ABXX02000003.1| GENE 214 231971 - 232606 801 211 aa, chain - ## HITS:1 COG:BMEI1443 KEGG:ns NR:ns ## COG: BMEI1443 COG1011 # Protein_GI_number: 17987726 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Brucella melitensis # 5 211 3 205 205 86 31.0 4e-17 MTSPSANVTDVVFDFCGVLIDWQTRACLEGRYPQVVVDRICADNDPCGFYDYEDRMDHGE DFEAIYPDVVREQGEEIAEIFRDYIERYGDALPRMIPDMEQLLRDLKAAGYGVWGLTNWS HETFHFAFERFPQLGELLQGTVVSGVEKMHKPNADIYELALSRFNLRPESSVFFDDTAKN VTGAQAVGMHAFRFTNAGQARRDLKSLGMDF >gi|222441570|gb|ABXX02000003.1| GENE 215 232699 - 234474 1409 591 aa, chain - ## HITS:1 COG:Cgl0579_2 KEGG:ns NR:ns ## COG: Cgl0579_2 COG0063 # Protein_GI_number: 19551829 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 281 549 1 259 287 114 33.0 4e-25 MDIADDADRLQTLLYSAYDSDTVREMERPLLDDGVPLMRMAASAAAHVTMTLLDDEDLAV EDARVALLVGAGDNGGDGLYAGAELANEGAHVTAIAVGRSLHEEAFGAFVHAGGRVLVLD PAAEIPGCTTGFSAGEAGERLQAAVEYVQGSHVIIDAMTGIGVSGALRGIAGAIASSLGF DGELPDRPALPNNEPSSALPLVVAIDTPSGVGVNDGSLPGPYIPADVTVTFGAMKPCAMV PPASYACGRLTLVDFGFDIDDCVPAAEMTDGDFVTDSIRLPQLSDGKYSRGVVGLVTGSA RYPGAAVLSATAAARANTGMVRYLGPQRAQDMVLSSLPEAVIGKGRVQSWVVGSGVPTGG DEAADTDIQRETITALLKHYALQEKTGSNDDARNESALGMPPIVVDAGALDLLPGKVPAQ VVVTPHVGELARMLTRLDGNEASVDKVRSQPLACARRVHELTGATVLLKGAVTMVVGTDG EGNERVILSGRAPAWMSTAGSGDVLAGMLGALLAQQDDMLAEDPALVPEVVAAGAYIHGL AGAIASRSEQRGWHRPQIYGHSKKQHFGEIGHPIIASDIIGGIQPAFLQLL >gi|222441570|gb|ABXX02000003.1| GENE 216 234556 - 235269 244 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 223 14 243 329 98 28 4e-19 METKMAYIEMQHSYKRYQMGSTTITANDDVSFGIEKGELAIILGASGAGKSTVLNILGGM DTNSEGSVVIDGRDISNYSPKQQTAYRRTDIGFVFQFYNLVANLTAKENVELASQIVSDA QDAVKVLEDVGLGDRVDNFPAQLSGGEQQRVAIARAVAKNPKILLCDEPTGALDYNTGKQ VLQILQDMSRKKGATVVIVTHNSAIAPIADRVIRMHDGKVTAVDVNEHPMDIAELEW >gi|222441570|gb|ABXX02000003.1| GENE 217 235606 - 236031 357 141 aa, chain - ## HITS:1 COG:no KEGG:BDP_1211 NR:ns ## KEGG: BDP_1211 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 9 141 1 133 133 181 80.0 1e-44 MSYPQAPGVSRHTMERMSDNTSQRKALQQLESESDYDRITYYQKPFMVLWAAVQEASSEL QDDYALSPELAQLWVAEQIRKVSDSLVDRLAETALAHGESKSNVARAAGASPANALRRFP RLKTDGPHERTLIDDVLDSLE >gi|222441570|gb|ABXX02000003.1| GENE 218 236391 - 236756 165 121 aa, chain + ## HITS:1 COG:no KEGG:BAD_0773 NR:ns ## KEGG: BAD_0773 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 12 121 98 207 207 145 62.0 6e-34 MRRNNSGFQASRGVDLLADPQEAIVAPADGVIAFSGNVGGKAVVTIRHGGDLSGLTSTFE PAIAERDVGAHVAQGERFARVEGESDHCDERCLHWGIKSEGRQYTNPESKTRTVRIGLKG L >gi|222441570|gb|ABXX02000003.1| GENE 219 236871 - 238682 1919 603 aa, chain + ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 3 597 2 596 600 469 40.0 1e-132 MYKEYTRPLEQQIDTDKNIFSVLDERANRTPNDSLVEYKNEHGEWSSFSATEFRAKVIAI AKGLIAQGIMPGESVSIISHTCWQWTALDVAIMSIGALTVPVYETNSPAQVKMIFNDANV KMAFAEDDAQRDKIESIRNECSNLGDVYVIGLGAIDTMIEYGHAVSDAEFQEREHAVKGS DLATIVYTSGSTGTPKGIELTHSNFVFITYSGISSMPDIAMKPNRRLLLFLPLAHVFARY MQFFCFAGNVSLGLSSNLKTILADFKAFKPTFILAVPRIFEKIYNAASQKAGAGLKGRIF AGATQTARDWSYAQQSGEGIPVVLNLKHALYNKLVYSSIMDVFGGHVEYAVSGGAPLDSS IAHFFNGVGLPLLEGYGMTETCAPSSVNPTSGYKIGTIGLPLQGVAMGVDEEGELCIKSP AVCAGYHNNPDVTRQQIVDGWLHTGDLGSIDDEGFVSIVGRKKDLIITAGGKNVSPCEME ASIMTSPVVSQCVMIGDRKPFIAAIIALDLGETNAWLASKGAECAASLEEASRNPIVRAE VERAVNKANELASRAESIRKFEIVPDEFTEENGLVTPSMKARRQAVVDHYRMLIDTVIYV PKK >gi|222441570|gb|ABXX02000003.1| GENE 220 238823 - 240355 1745 510 aa, chain - ## HITS:1 COG:no KEGG:BAD_0775 NR:ns ## KEGG: BAD_0775 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 510 1 502 502 613 68.0 1e-174 MTLHRTTVTKRLFALLASTSLIMTMGACSSANETQSHETDSPSTATATDAGNVVIFTPSD GITISQQTPLSKWEKLVPEIVSSLKDNDVKGANITVKAAPSLDKQSQSVQDYVVNHVNST SDDADSSDKTTLVVAPVADTTESDRQYGDYVSHAITWNGSSSDEDAQDYAQSAERLVSAL QLAQNEGMKVVLVSNTLQGFTPDVYVPMTTAEQIGQLQAKQLVSKLELDKTSSDNPKHIE VLLPYDAANESGSTADATFAQGVFKGIWSVLGPYFKDGKAVSPSGTLTSSSAESDWVSVA FDAAKSERVKSTLAGRLGMDKDTSRHTRIDGIISCNDYVAGYASEELNDLGYTGSAADIN PSITISGIVDNITGKKDLKKQSVPDPAQAPESDDGDSDTEDTSDSLDEQNSQWPIITGYG AYVSSIPNIVNGKQWMTALENRKTLASDIAQTCVQLNTSGKLAKMTFISSVAMEDMKVPT IQEEALAVSASNLKKTLIEPGYISLAEAGL >gi|222441570|gb|ABXX02000003.1| GENE 221 240511 - 241731 1809 406 aa, chain - ## HITS:1 COG:BMEI0791 KEGG:ns NR:ns ## COG: BMEI0791 COG0538 # Protein_GI_number: 17987074 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Brucella melitensis # 1 405 1 403 404 630 75.0 1e-180 MAKIKVEGKVVELDGDEMTRVIWKDIKDRLILPYLDVDLEYYDLGIENRDATDDQVTVDA AKAIQREHVGVKCATITPDEARVKEFGLKKMWKSPNGTIRNILGGTIFREPIVMSNVPRL VPGWTKPIVVARHAFGDQYKATDFKVPGAGTLTVTFTPEDGSEPIEHVVYNYGADGGVAQ VQYNVNDSIRGFARACFNYGLMRGYPVYLSTKNTILKAYDGQFKDTFAEVFENEYKDKYA AAGLTYEHRLIDDMVASSLKWHGGYIWACKNYDGDVQSDSVAQGFGSLGLMTSVLMTPDG QTVEAEAAHGTVTRHYRRWQKGEKTSTNPIASIFAWTGGLKHRADLDNTPEVKYFAETLE KVIVSTVEGGQMTKDLAMLVGPDQAWLDTEGFMNALDENLAKALAE >gi|222441570|gb|ABXX02000003.1| GENE 222 241878 - 242996 1485 372 aa, chain + ## HITS:1 COG:slr1722 KEGG:ns NR:ns ## COG: slr1722 COG0516 # Protein_GI_number: 16330504 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Synechocystis # 5 371 3 369 387 328 48.0 1e-89 MSQEIEIGLGKKGRLAYSLDDVSIVPSRRTRDPQDVSTSWQVDAYEFDVPVIGAPMDSVT SPATAIAMGKMGALGVLDLEGLWTRYDDPQPLLDEIAELPAESATERIQQIYAEPIKPEL IVERLHEIRDAGVTVAGALSPQRTQDYYSTVLEAGVDLFVIRGTVVSAEHVSQDHEPLNL KKFIYDLDVPVIVGGAANYTAALHLMRTGAAGVLVGFGGGAVSANRNTIGVHAPMATAIA DVAEARRDYMDESGGRYVQVIADGGMGDSGSFIKAFALGADAVMLGSPLARAEEAPGKGM HWGAEARHQTLPRGFRTNVGTVGTLEDIMFGPSHNADGTTNYIGALRRAMATTGYVDLKS FQRCPVTVAPTR >gi|222441570|gb|ABXX02000003.1| GENE 223 243145 - 243735 566 196 aa, chain + ## HITS:1 COG:BH2418 KEGG:ns NR:ns ## COG: BH2418 COG2176 # Protein_GI_number: 15614981 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Bacillus halodurans # 20 191 417 584 1433 123 39.0 2e-28 MAAHRSGDSRRLDPLSGRFTDYIVIDTETTGLSVRKGAKLIEIGAVKIRNDELVDEFDQL INPFEHVPSRITGLTGIDDGMLLGKPDVREVMDEFARWCSDTAVVMAHNASFDMSFLDNA VQLAYSERDARFAHHFVDTLDLSRRLHPEKRSHKVSTLIVDYHIADMEEHRALSDARQEW MLYRAMRDEAELLGML >gi|222441570|gb|ABXX02000003.1| GENE 224 243804 - 244109 153 101 aa, chain - ## HITS:1 COG:no KEGG:Blon_2467 NR:ns ## KEGG: Blon_2467 # Name: not_defined # Def: sodium:dicarboxylate symporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 49 269 317 485 93 95.0 3e-18 MNPIHFFKAFFPAGVVAFTSESSIGTIPVTVRQLRSAGVPGDIASFVAGTEPSQRANITN DAKSDSANVSHQQSGFALNFAPNAMFSASGDDACCGTKPNK >gi|222441570|gb|ABXX02000003.1| GENE 225 244003 - 244440 317 145 aa, chain - ## HITS:1 COG:no KEGG:Blon_2467 NR:ns ## KEGG: Blon_2467 # Name: not_defined # Def: sodium:dicarboxylate symporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 103 1 103 485 164 82.0 7e-40 MSGIAYDWIALGVAAILFVILAFLKRKKNAGFTTRVLLATAFGIILGIAFNGHTDYVGAV GSIWSNAITALVVPLLLFSIISSITNLGESMRLKSIGAKTVFFLLLNTDEVESNPLLQSV LPCRSGRVHLGKQHRHDSSHRASVT >gi|222441570|gb|ABXX02000003.1| GENE 226 244739 - 246121 1757 460 aa, chain + ## HITS:1 COG:Cgl0919 KEGG:ns NR:ns ## COG: Cgl0919 COG1207 # Protein_GI_number: 19552169 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Corynebacterium glutamicum # 4 454 8 460 485 385 47.0 1e-107 MALSAAIILAAGEGTRMRSNKPKVLHTLAGKTFLNRVMDSVSALDPETLAVVVHYQAERV AEAARSYNERVTIVNQDDIPGTGRAVQCAMTQLKEQGGLDGSVLIAASDMPLLDADTLNQ LLAFHEQSGNGATVLTTILDDPTGYGRIIRDSKGNVLRIVEQKDANSSELAVHEVNTSVY VFDAKLLAEAIANLKSNNAQGEFYLTDALETAKANGAVGAFAAPDPLSVEGVNDRVQLAA LAKAHNKRICEHWMRKGVTILDSETTWIEDDVRIERDAVILPGCFLEGQTVIGEGAQVGP YTTLISAVIDADAHVERSRVQETHIGRAANIGPWTYLRPGNDLGEESKAGAFVEMKKAHI GNGTKVPHLSYVGDADLGEHTNIGGGTITANYDGVHKHHTTIGSNVHVGAGNLFVAPVEV GSGVTTGAGSVVRHDVPDDSMVYSENTQHVVEGWKPEWER >gi|222441570|gb|ABXX02000003.1| GENE 227 246109 - 246531 634 140 aa, chain + ## HITS:1 COG:MT2493 KEGG:ns NR:ns ## COG: MT2493 COG0799 # Protein_GI_number: 15841939 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Mycobacterium tuberculosis CDC1551 # 6 125 1 118 126 98 45.0 3e-21 MGALNMPAVQDSIDAIRIAAAAADRMKATDLVAFDVTEPLAITDAMLVATASNERQVLAV AEEIEKDLYLKSGKRQPRSREGLTEGQWVLLDYGDFVIHVMHQESRDFYRLERLWKDCPS IDLQLEHPETSDEETAEIAE >gi|222441570|gb|ABXX02000003.1| GENE 228 246640 - 247371 744 243 aa, chain + ## HITS:1 COG:DR1097 KEGG:ns NR:ns ## COG: DR1097 COG0406 # Protein_GI_number: 15806117 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Deinococcus radiodurans # 14 189 17 184 232 90 41.0 3e-18 MPRNVELEHNSAVPEHVHAITLVRHGRTAYNAQHRLQGQIDIPLDEVGQWQVRQTADALR ELYVDRRPDIPNRLVICSDLGRAAATAHAFADPLGLEVHPDIRVRERSFGDWEGIPVEEL AQRYPEDYRSWAEFRGGELKYGAEPKEEVGRRGVEALNDWAFRAGSDTDLYVFSHGAWIS QTLQTLLGMADAHGDFADILSMRNAHWVRLIPLEIGSTLRWRLMDYNHGPAIADSEEWEH PSL >gi|222441570|gb|ABXX02000003.1| GENE 229 247485 - 248615 824 376 aa, chain + ## HITS:1 COG:no KEGG:BAD_0868 NR:ns ## KEGG: BAD_0868 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 366 1 340 358 133 42.0 2e-29 MKNFFKGISFSSICAGALAAVTSFLLSAKIGIAGSVIGVAAGSVVSAVATQVYKNVLKAS GEKIQQAVPFPSSSETVSNERAADETQVLGSSEQDDETRIIGSSPVASDVTMVLSADTAA VAQSGLPRVISSGQEYADATRALGDIAGAGETSVFPNGQRGVSDVGVVTGKTGTLGSAHD ARVQHAGQRSSNWLHSKYAPAIIAFVSALVGVGVSAGLILAFTGGQGTDTVVRDVVHEKV VPSHGNTDDYQTGDGQTPVQKPKSDSTDSNDETTTDGSDKTTNGSTDSSTSNGTSSNTNG STSGNSGSSSDNSSNGSSQNGTDSSNGTGSNGGTSGTTGDGSSSGSGNSGTDGSTGTGTS GSTDGTTGSTGDASSN >gi|222441570|gb|ABXX02000003.1| GENE 230 249203 - 250465 696 420 aa, chain + ## HITS:1 COG:FN0017 KEGG:ns NR:ns ## COG: FN0017 COG3177 # Protein_GI_number: 19703369 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 91 411 96 415 415 178 34.0 2e-44 MSMEYRTLARLFHADRSMDSYANHDRLVRQRLEADSTFTTGIGTPLGELFIATPRCVCML TQKVLLAERRVSAMWRSIPGVMRWNYIYHAISEELLATNEMEGVRSTRKETEAAVAAARQ ARTEGDMEKARFGEFAKLYLNLTNRDVELPKTLEDIRDIYDKIALDEIDDKNRPDGELFR KGDVEVQGPHGTVIHSGVSSEARISALLAQMMDLARSDTIPFLQRAIASHFLFEYIHPFY DGNGRTGRYLLALYLSNDLTLPTVLSLSRTIAENKNEYYKAFTEAEDKLNSGELTFFVYT ILGLIERAQESLIEELGVKIDQLDKATVLRDELRREHALSTNATLLLYAVMQEELFDTTK SMTLEDAGGDLMLTKQTIRKYVDELAGASLIEFTGRRPLRFRASGALRTRIQAKREWGME >gi|222441570|gb|ABXX02000003.1| GENE 231 250507 - 250758 133 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352034|ref|ZP_03743057.1| ## NR: gi|225352034|ref|ZP_03743057.1| hypothetical protein BIFPSEUDO_03642 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03642 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 83 1 83 83 165 100.0 1e-39 MEKKGLILGWHQRYLLDDMHVELIRNGFKDKACSMPISALGLDIVCEFLYSIDGFFPQKN LCRFRHFRFSLGFLRCGNSCLLA >gi|222441570|gb|ABXX02000003.1| GENE 232 250956 - 251360 586 134 aa, chain + ## HITS:1 COG:SPy0844 KEGG:ns NR:ns ## COG: SPy0844 COG3576 # Protein_GI_number: 15674878 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Streptococcus pyogenes M1 GAS # 4 131 2 128 133 80 36.0 8e-16 MVDLTDEMKGFLNSNLAWVATISKEGQVDLGPKMSMFIIDNNHIGYHERTAGQTYRNLLD GSDLVVAVANLEQKKGYRFRGNVVLHSDDAIYDEQVKVAEERGTKKPMTIPVLEITEIQD LTPGATAGKTIVKD >gi|222441570|gb|ABXX02000003.1| GENE 233 251677 - 253353 1825 558 aa, chain + ## HITS:1 COG:no KEGG:BDP_1224 NR:ns ## KEGG: BDP_1224 # Name: not_defined # Def: cell surface protein # Organism: B.dentium # Pathway: not_defined # 28 528 7 505 536 551 60.0 1e-155 MTQHTIRRRWTSMLALGMIAALAMPGTAQATPQLGDLGVKQSMSVKASNGESLEGKDLRA IQLATYTAASVDGNTIVGYDLTTNTALASDITAAAKAAGATDTNLTVNGKNDPMVWVVKN LTDSRSDPWSGKLRNFCNSLAKQTNFAKQDGTAVSTLSQDKATMSTGNVLVPGIYAIVDR TPATTTLSSGTAIKTTASIMMMNGTAVNGVNQLRTAGGTTLTLGQVIYKVSNVESPDKKV NVGSAWKDSASEAIGKDLTYRVTQKIPNWTGYEHYYLALNDTLGAGLDYGSLTSITVGGK ALASTFYKENVNGKTISWLFGVNGDILASDASKAALPVGATITVTYKARLNSNAVIGSPC NVNSIDLEYSHNPNAWQDHNNQPGNEVKVCTGEIALRKVDAKSQKLTGAKFAIAQGASDK TPLKLVALGNGTYRLATSGDTTTTTTFEAGETKIQGLKGEYTITETQAPQDYSSLMLPSA VVTVNVDDTNMTWSLDVKSDPNNLIKKGDSHTVVVTNIRTITEIPLTGAAGLTMLFSIAA LLFIGGIVMLRMCRSSND >gi|222441570|gb|ABXX02000003.1| GENE 234 253378 - 254370 158 330 aa, chain + ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 55 248 10 202 251 146 39.0 6e-35 MAIPPHSKPRHKKAPNKRSIIRWCVGTAMLTATALIISIPLIMRAEDNIQQAANVKAYAA TITNTANKAIQESKRQAKLYNARLANQTSNQTDDEPATQNPDEYNRQLVIPPSDVMATIN YPKLGISLPIRHGTSEQTLAIGAGHWEGTSLPIGGAGTHTVITAHRGLADKLMFTKLDQA REGDEFTITTLGETLTYQVQTIRTITPDDFTWINKHDASADQATLMTCTPYGINTHRLLI TGTRVPNHDECPPETGCLTDGTLSTTAFALTAIWATLTTLARHSYNEMHDRRSTLPAPRT HRIQSRKTTARPNRHSPRHRRQVAGRPKRL >gi|222441570|gb|ABXX02000003.1| GENE 235 254243 - 255091 744 282 aa, chain + ## HITS:1 COG:Cgl2299 KEGG:ns NR:ns ## COG: Cgl2299 COG0406 # Protein_GI_number: 19553549 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 1 253 1 233 236 85 28.0 9e-17 MIDEVLFLRHGRTAYNLARRLQGQIDIPLDIVGRWQADQSAYELAKTYYWAKVAHIADHN DELAQPAYEGAYLADLNEINEAPAASRRMVVVSSDLFRAQQTAHAIADLLGLDVALDPRL RERSFGEWEGMTREEILEQYADDYHSWRAHTGGETKHGVESRRHTGQRGSQAIRSIIAEH ADDPTATTLLAVGHGSWIVATVAVLLDMDPDDLNNLGAMRNAFWTSMSVNTGGSNGPADP DTWQWKLDAFNQGPAIAALTDWENGPKELRGPNMPLWKPIVQ >gi|222441570|gb|ABXX02000003.1| GENE 236 255342 - 256283 1147 313 aa, chain + ## HITS:1 COG:SP0185 KEGG:ns NR:ns ## COG: SP0185 COG0598 # Protein_GI_number: 15900122 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 312 4 314 314 262 48.0 8e-70 MFRTINGQVEQIQKPENGSWLCLSDPTDVELANVSMETGVDLADLRAPLDDEERSRVDVE DDYTMIIVDIPTVEERGGRDWYETIPLSIIITQSAIITVCMQDTPVLHPFMEGTIRGFNT YMKTRFILQILYRNATMYLRYLRIIDRESDKLELKLRHSMQNREILMLLELSKTLVYFTT SLKSNEIVMEKLTTLPRIKQYPEDEDLLDDVITENKQAIEMANIYSGVLANMTDAFASIV SNNLNNVMRIFTIISITLSIPTLIFSMYGMNFQEGMLGMPLTDKPWGFAVIIGISLVVSA IVTWFLTRSRMFK >gi|222441570|gb|ABXX02000003.1| GENE 237 256304 - 257170 911 288 aa, chain + ## HITS:1 COG:BS_glnH KEGG:ns NR:ns ## COG: BS_glnH COG0834 # Protein_GI_number: 16079797 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Bacillus subtilis # 44 262 48 265 273 110 33.0 3e-24 MLRLSRLSRNIAALVCAASTVLGTSACGTSISVVTNGLAQGPTIAIGVAADQPGLGFLHG GEYSGFDISVAQYVANTLGFAKKQIVFKQVLPSTRVSSLEDGTVDMVVDAFAADDVQDGE VELAGPYLTVHAALLVRSDSAGTITGTDDLAGRTVCVAKGGIPSYSVRNLAEDVTVSERD TYPQCETALMIGQADAIAADDAIAAGLASNRGGGYLKVVGETFGERSYAIAVKSGQSTLA KQIDAALQSMMDDGSWKQAIDKMKQSIGYVPDMSLNPPAITLSAASEG >gi|222441570|gb|ABXX02000003.1| GENE 238 257107 - 257259 102 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLAAQLDTSQGVNHYARSVLQSVTQGGGRQPSDAAESVIAGGLSDMSGT >gi|222441570|gb|ABXX02000003.1| GENE 239 257265 - 260237 4392 990 aa, chain + ## HITS:1 COG:Cgl2961 KEGG:ns NR:ns ## COG: Cgl2961 COG0495 # Protein_GI_number: 19554211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 10 987 2 950 952 993 53.0 0 MSDIEKSAQTQSNEPAEPSFRYNADLAQGIEEKWQKIWDDEGTFWAANVNGDLKDGKGRN AEGRPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAE QYAVQTGQHPRITTEQNIANMRRQLHRMGLSFDNRRSFATIDPGYVRWTQWIFSRIYDSW YDEDATNPSGSKGCARPISTLVEQFESGEREIPGFAGKQWNDLTEAEQADVLNDFRLAYI SKSPVNWCPGLGTVLANEEVTAEGKSERGNFPVFQRELRQWSMRITAYGHRLIEDLDGID WPEKVKLMQRNWIGESHGASVHFDVETPNGVKDMEIYTTRPDTLFGTTFAVVSPEHHLLE DVPAEWPSETPEDWKGGYATPVEAVKAYRMAAESKTAKDRVDEAGEKTGLFTGLYAINPI TGAKLPLFTADYVLMDYGTGAIMAVPGGDQRDYDFAVKFGLPVTYTVQPLPESGDDLANY EGKAPFVSHDGIVINSAVDATRAKGDALSLNGLRVDEAIDKVNAWLEEAGVGKGTVSYRL RDWLFSRQRYWGEPFPIVYGEDGTPHLLPDDQLPINLPDVPDYSPKTFDPEDAESNPEAP LSRNEDWVKVELDLGDGKKTYYRDTNTMPNWAGSCWYYMRYLDPTDTEHMVEKSEFDYWM GPNHNETTGKSGGVDLYIGGVEHAVLHLLYSRFWHKVLFDLGFVDSAEPFHKLFNQGMIQ AYAYTDDRGQYVPAAEVVEGPADANGEPTFTWNGEHANREFGKMGKSLKNIITPDDMYAN YGADTFRLYEMGMGPLAESRPWNTRNVVGSMRFLQRLWRNVVDENTGEVRVTDGKLDTKT LKLLNNTIADVTVEMEAMRPNTAIAKLIVLNNHLTSLNEVPRAAVEPLILMLSPIAPHIC EELWNKLGHGESLAHAEWPKADERYVGQDAVTAVVQIKGKVRAKLEVSPDIDPKELEKMA LEAVADRLGGKEPRKVIVKAPKIVSIVPAE >gi|222441570|gb|ABXX02000003.1| GENE 240 260412 - 261203 483 263 aa, chain + ## HITS:1 COG:NMB0299 KEGG:ns NR:ns ## COG: NMB0299 COG1555 # Protein_GI_number: 15676221 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis MC58 # 202 259 70 127 148 64 51.0 2e-10 MGIIVTPPGRRNRQAETASQSAQRLRGLGMPETRGKNARGQNVRNEHAVPAISETTSISE ISAAAETSTAIATTEQSPEPAKPTLRDLAGVKPSDKPTEQDRPKRDRPRLVFQPIHAVIA ILTLSCALCASLTMLIQQAVHYSALQQSQITQSEQSKANGTEKDKTASTQTTPSQQPSTE PDSQSEPTSGPAEPADPADGLLNINTAGSDELQTLKGVGPVTAQRIIDYRNQIGRFDNVD QLLEVKGIGEKTLAKFRDQVCAR >gi|222441570|gb|ABXX02000003.1| GENE 241 261200 - 262951 1200 583 aa, chain + ## HITS:1 COG:all1983_1 KEGG:ns NR:ns ## COG: all1983_1 COG0658 # Protein_GI_number: 17229475 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Nostoc sp. PCC 7120 # 285 494 286 492 612 73 28.0 1e-12 MRGNTFEWRDGEQGSRDWRLLPAALCGWAASLATHMGFDYCVERDGRFGMLLLVVALAVP LLALLGLLGLPFLRSPMLRVPVGVRRAVSAWHFSIIVCVVAAMACASSALTYDVLQWRDV ASYAARNGESDVVTLVRTTSPAVNSNRRANDCQIDATISTITASQVTQPSMMRVRVYADR PDCGTLKQGGEYRMRGTLAISQYGAMPLWLTDIASVERIRGPNLALRTIGMMQQAFFEQT SRLSDQGKVLVPGLTLGILGQDYVPPDSGNGQTGTGIDSTYANLLENAFQRSGILHLMAV SGGHLAVVATLVRAVCSFLLLPKRVTAIAIGASYIMLAMCVFPSDSVSRALLMGLAGAGF LFLGRRTQALSTLSWTTLGMLMVNPHMSRSFGFALSCAAVLGIVLFAGPLGAWLTPIMPA FIAQTMAMTIAAQLFTLPIQVLIEPELPVYSIPANLVVAPFVGFSTLAGLASLAISWILP SLGFIFASLASWGTAIMEFMALNLGSGDHATIPWTGDAGGALLIILVEIIGYTTARFAGT LFARITTTEPNLPGRRLIHNPIERAKAWGERTYNALKTMKWNE >gi|222441570|gb|ABXX02000003.1| GENE 242 262985 - 263962 768 325 aa, chain + ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 5 323 13 330 331 115 26.0 1e-25 MPKPSATTPFHLIYGGDPYLNEQTVRDLRHQAQRKHPDAETIELDATNADHYAFDEAVSP SLLSERSIVIVSNLQNADDKLGETMVAYCKQAVNNPAEASVVICQHEGGIKGKRLIDQLT KAGAVKETVADLKKAEAKLNFTIQCFERRNRRIEPMAAQQLVAVLGDKTGELAAMAGQLC FDFDDNPITLERVNQYLTANPQVDGFRVADLALSGRAADAIIAMRASIEQGTAPIALIGA LAMKLRTMAKASAVRSGTISEAEAKTNSWVLKNATRQLSGWTSDGMRRCIQMLAWADEQS KTNGSDPVYALERSIELISSKGRTN >gi|222441570|gb|ABXX02000003.1| GENE 243 263964 - 264335 348 123 aa, chain + ## HITS:1 COG:SP1944 KEGG:ns NR:ns ## COG: SP1944 COG0802 # Protein_GI_number: 15901768 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Streptococcus pneumoniae TIGR4 # 29 110 7 82 147 80 47.0 8e-16 MSEATITDANENTSEGTAKTVTVEATTGEAMRELGKQVAHLTHGGDVILLSGPLGAGKTT FAQGFGAGLNISEPIVSPTFTIARELKGQFPSGNSAHLIHVDAYRLGGNAYAPRPKCHRT TTR >gi|222441570|gb|ABXX02000003.1| GENE 244 264295 - 264597 251 100 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1132 NR:ns ## KEGG: BLJ_1132 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 3 95 96 187 188 137 73.0 1e-31 MPPGQNAIERLLDELESLGLDEELEDPSDNTIILMEWGEQMAAALAPERLEIHIDRPLNT VSTDETSRADNELTSNGTRTVTFIPVGASWQTFDITRNNR >gi|222441570|gb|ABXX02000003.1| GENE 245 264672 - 265481 806 269 aa, chain + ## HITS:1 COG:Cgl0576 KEGG:ns NR:ns ## COG: Cgl0576 COG1214 # Protein_GI_number: 19551826 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Corynebacterium glutamicum # 5 255 17 212 225 71 27.0 2e-12 MQTLVIDTSYGSTVGMVGHDPIVETDSRTHVEKLQVNIATTVEQAGLKPENIDRIIVGIG PAPFTGLRAGIVAAKALAFATGAQLIGQNVLSPQVLVRNAEHDGRHHLTLAVNDARRKQL YFTLLDGSGYEAGGSAGEDHDANVENGCVETLIDMDIDYPESIANRVNEVLERLRQADPN VEYVVDVVGHGAAKYAQSWASLPEGGEVRDQALLDEGASGLERFAAFATSQQSLVNPEPV EPLYLRRPDVSVPNPLKHVLNHAGAERTE >gi|222441570|gb|ABXX02000003.1| GENE 246 265491 - 266066 247 191 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227982014|ref|ZP_04029271.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Thermomonospora curvata DSM 43183] # 14 175 13 146 162 99 37 2e-19 MIVDHTSIDEQIAVPQMAALEADLFGRGAWSEQSIRQEFQAPARTYLFDIDDDGKTADCG IAGCVAVDEPVAGSVAGDSARQQPVVRGYAGFWYDGDDAEIMTIGVGRRFQRQGIAASLM EALIARAREQGAKRMLLEVRVDNTPALALYERFGFAKMGLRKRYYQPEGIDAYTMSLDLE PRIVGFAAAEQ >gi|222441570|gb|ABXX02000003.1| GENE 247 266115 - 267158 1190 347 aa, chain + ## HITS:1 COG:Cgl0578 KEGG:ns NR:ns ## COG: Cgl0578 COG0533 # Protein_GI_number: 19551828 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Metal-dependent proteases with possible chaperone activity # Organism: Corynebacterium glutamicum # 5 340 2 336 344 276 48.0 4e-74 MSGPIVLGIESTCDETAASVVQGRTLISNVVASSMDEHARYGGVIPEIASRAHAEAFVPC VSKALADANMTLSDVDAIAVSAGPGLAGCLAVGVSGAKSLAWAANKPIYGINHVIGHIAV TQLQFGPFPEDTLALIVSGGHTSLLHVEDVARHIDVVGTTLDDAAGECFDKVARLLGFPY PGGPHIDRHAQLGDPHAIKVPQGLTQGKAGQQHPYDFSFSGVKTAVARWIEEQQAQGNEI PVDDVCASLADSVATVLAKKAMRGCEQYDSKTLIVGGGFSANSQLRAKLLEVGAEHGVEV RVPQLKLCTDNGAMVAMLGVNLVEAGVAPSNPDFAIDSAMPLTKISM >gi|222441570|gb|ABXX02000003.1| GENE 248 267635 - 268585 1132 316 aa, chain + ## HITS:1 COG:BS_yxeI KEGG:ns NR:ns ## COG: BS_yxeI COG3049 # Protein_GI_number: 16081005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Penicillin V acylase and related amidases # Organism: Bacillus subtilis # 1 311 1 312 328 160 30.0 4e-39 MCTGVRFSDNEGNMYFGRNLDWSFSYGETILVTPRGYRYDYAYGAKGKSEPNAVIGVGVV MADRPMYFDCANEHGLAIAGLNFPGYASFAHEPVEGTENVATFEFPLWVARNFDSVDEVE EALKDVTLVSQVVPGQQESLLHWFIGDGTRSIVIEQMADGMHVHHDDVDVLTNQPTFDFH MENLRNYMCVSNEMAEPTTWGKAELSAWGAGVSMHGIPGDVSSPSRFVRVAYTNTHYPQQ NNESANVSRLFHTLASVQMVEGMSKMGNGQFERTLFTSGYSGKTNTYYMNTYEDPAIRSF AMSDFDMDSSELITAD >gi|222441570|gb|ABXX02000003.1| GENE 249 268746 - 269435 751 229 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 26 222 8 200 201 91 33.0 1e-18 MAKPFSKTVIHNTDAKLSKQVRQPLKTNQGIHKALTWRVVDIAVGAAVGVMSGVMFWVFD GLSYGLFPLMTLILPGSAALLHALFYFPATLGSLIVRKPGASAYVLLVASFVEVVLGTKY SVSLVVIALLQAAAAEAVFALFRYRRWTLGVTILSALAIGIVYNFYLLFFYYQAFTFFSP RGIIGTICELLSAVAFAGFGSWGMYCALRKSGVLSRFASSHKEHNEENA >gi|222441570|gb|ABXX02000003.1| GENE 250 269927 - 270391 500 154 aa, chain + ## HITS:1 COG:no KEGG:BDP_1107 NR:ns ## KEGG: BDP_1107 # Name: not_defined # Def: MerR family transcriptional regulator # Organism: B.dentium # Pathway: not_defined # 14 151 1 138 141 218 79.0 7e-56 MSTTTWHTIREASMISGLPESTLRYYEQIGIIAPIARDPSSGHRAYTDEDIQSLVTISCL SATGMPLDAMREYLKNRFDGTEGARRQMALLDAQALRLAAKAESIRMQQAYVSLKTLYWR AVAEGHDDEAQRLLEENHDVIETVKKQIRSKADA >gi|222441570|gb|ABXX02000003.1| GENE 251 270450 - 271496 1500 348 aa, chain + ## HITS:1 COG:L190278 KEGG:ns NR:ns ## COG: L190278 COG1063 # Protein_GI_number: 15673531 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Lactococcus lactis # 1 348 1 348 348 368 52.0 1e-101 MKAAIFKGVKQMACEEHAEPTIIDGGDAIIRVVRACVCGSDLWFYRDGSKEPNTQAGHEA IGVVEQIGDDVTVAKPGDFVIVPFPFSCGKCPVCKAGFESSCPHGGYFGDEGLGCQAEYL RVPEADGTLVVVPGDAKSFSDEMLASLLTLSDVMSTGYHAAASAEIKPGDTAVVFGDGAV GLCGVLSAKLMGATRIISMSRHADRQRIAREFGATDFVEERGDEAVAKVLEMTDGYGADA VLECVGSALSNDTAMKVARAGAVVGRVGLPHGVEADIPGLFYRNVGLRGGPAPVRTYDLQ RLLKEVLDGNINPGIVYTSEYTLDDIQEAYAAMDERRTVKSLLRISEV >gi|222441570|gb|ABXX02000003.1| GENE 252 271572 - 272315 836 247 aa, chain + ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 4 240 15 246 250 233 45.0 2e-61 MNSFWNNDRTLSQTDPEFIEFFSNFAYDEVVNEPGANHPDLDDKTRSLAILAVLVGCQGL DAFEMMLPVAYETGLSSIAIKEMVYQATAYCGFGKTLPFLKKLNNFLGAANVHLPLEPQG TTTPETRARAGEDKQIEIFGEGMRGFTQSGPEDTRHINKWLACNCFGDYYTRGGLSTRER EMITLCFLAAQGGCEPQLTSHAKANMGVGNEKAFLIAVISQCMPYIGYPRTLNAIRCIND AAEQMQG >gi|222441570|gb|ABXX02000003.1| GENE 253 272428 - 273558 1705 376 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 1 374 1 373 374 365 49.0 1e-101 MTYSQNAPFRADVVGSYLRPAELKQARADFAAGKIDEAELKAVEDNAITELVAKQKAAGL HVITDGEFRRGWWHLDCMWGFAGVEKVSMDKGYFFHDEETRAESARLTSKIAFDPAHPFV EHFKFIKQFEDDTAIARQTIPAPAQLYAELFRPENIASVHEFYGDTQKDYDELADDNAKA FHGLIMALYEAGCRNVQLDDCTWGMFCDPNFNQHYTADEFAAMQEQYAAMNNAAIEDLPE DLVITTHDCRGNYHSTWASAGGYATVADVLFGKENVAAYYLEFDDDRSGDFEPLAKVSGD KKVVLGLITSKKPELEDPEVIKARIAEAAQYVPLDRLCLSTQCGFASTEEGNKLTEEQQW AKIALVQSVAKDVWGE >gi|222441570|gb|ABXX02000003.1| GENE 254 273593 - 273787 134 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIPDWRISDYPTYHFALPLPAARSHHSYHPPPESYVVQSQNTIMRPSHIPDVIVHFSEGL TSLP >gi|222441570|gb|ABXX02000003.1| GENE 255 273706 - 274158 566 150 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0519 NR:ns ## KEGG: BLLJ_0519 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 34 150 43 159 159 165 66.0 7e-40 MSDGTGRQAMAAQSGTSDNPKSSNQESSKKPKTLGKYLLVSATQTIVEFGSFTLLHVLSV PSAIANGVAIVLSASYNFLMNRNVTFKSSSNFGRSVALFMLLWVWNYLFGSIMLAWLPSA FGWNAVLVKFLTMACQFAWGYPLCKEVIFR >gi|222441570|gb|ABXX02000003.1| GENE 256 274255 - 275283 1043 342 aa, chain + ## HITS:1 COG:L67760 KEGG:ns NR:ns ## COG: L67760 COG0053 # Protein_GI_number: 15673428 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Lactococcus lactis # 29 334 11 304 314 158 36.0 1e-38 MNESQDSNDSSTSNPNDIRQQEAEHQGAAVKAALGANIGVAIAKLAAAFFTGSSAMLSES VHSIADCSNEIVLMAGGRFSKHKTDGDHPFGLYRAKYLASFVVATLLFFVGGFFSTSEAV KKLFAIAEDPALRDANQMELLVAFIVVFISACLEGYGLHQSIKEANERMERTGVAHMGVF RFWRRTKSAELASVIMEDTLALIGLAFAGAGIGLAILFDNEIFDAFGGLMVGLVLIAGSL LLMFKSGSLLIGEAVDSDTRKKIEQAVISTPGVERLLNMQTVHMSEDDILLCVKVQTSKL DRDYDVETVNKIERSVRTALPWFRFEIYVEPDLYRADHKIVS >gi|222441570|gb|ABXX02000003.1| GENE 257 275341 - 275523 154 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352063|ref|ZP_03743086.1| ## NR: gi|225352063|ref|ZP_03743086.1| hypothetical protein BIFPSEUDO_03672 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03672 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 60 1 60 60 85 100.0 2e-15 MSYSIEQFILDSGITRAEVDEAKARMLERMHMYGLKETHNKKAHEKEELALRTHRNASSS >gi|222441570|gb|ABXX02000003.1| GENE 258 275769 - 276476 852 235 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352064|ref|ZP_03743087.1| ## NR: gi|225352064|ref|ZP_03743087.1| hypothetical protein BIFPSEUDO_03673 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03673 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 235 7 241 241 217 100.0 7e-55 MENPKKLAVATIAGLTEVAGMAAPAMADETAADPMVGQTQSADPTKDALDKANTAVSESQ TAYDNAQQNVQDAQSKVDDAYASDPATNAAQSELDAAQSAKKDADQSAADAQADVDAAQA ALAEVNATLKTAETALATAKSDAESAQDAYDKAHKVVTPSKDTTITVDTPDSANSANSAN RAAVKTSTQAKLGDTGVDVMETAVFTIMAAGTAGATLMLKRRGDGRYGLMARHAK >gi|222441570|gb|ABXX02000003.1| GENE 259 276581 - 277480 787 299 aa, chain + ## HITS:1 COG:no KEGG:BLD_0377 NR:ns ## KEGG: BLD_0377 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 6 224 7 224 317 128 44.0 2e-28 MQGKLSEVSNPNISDAGSKNVTENKKKSRKPAVIAVASVAAVAVLAGGGWFVWKTYANHE LAEARQACVEASESYRKAADSYSGLVDGDAATASQITVKQVADAKTVDALAEALKANEPD VVACVADSKADYESKTSLIEKNTGWYGKHEKSLEEAVKAVNDSKLEKTVSDAERLLKNSD GKVADAATRDELSKAVKARDADKIAAASKKVNDSVTAKTKADEEAQRKAEEEAAAQAAAQ AQTQQSYSAPQQSYTPSYSGGSTSSGGGSSSVPDFVPSSGGLGCTTDCPPSSSDGLIHH >gi|222441570|gb|ABXX02000003.1| GENE 260 277732 - 278652 977 306 aa, chain + ## HITS:1 COG:no KEGG:BL1489 NR:ns ## KEGG: BL1489 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 23 261 23 267 1603 212 58.0 1e-53 MGSKNSNGRRKTLALLAATATLAGGLTAGTAWAGGGGDQGGTGGGGSAAQFWAYKDDATG SWGSATDLNSVSRAMAWKGVTMDDSAGKAAKALSDANAECVAGFRQRHPGEGDGDCRVVA VGAASGNGSTTSVWNGSGVYDAKIWKDNWYKYVAPNTYNYAGSQSYHTGDGFSDDPSNSV DKIMERHVDSTRSIVVIVLDKYQPAPPNYTLSVATKASGTTTKAGDTQNVADTVTTSRNG SSISENVTGTSTLRWAGVDGTTHNTWNGDTEVTAEGYYYASEDETILQPVARKDGETVDQ ITSTLR >gi|222441570|gb|ABXX02000003.1| GENE 261 278798 - 279574 678 258 aa, chain + ## HITS:1 COG:Rv1021 KEGG:ns NR:ns ## COG: Rv1021 COG1694 # Protein_GI_number: 15608161 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Mycobacterium tuberculosis H37Rv # 48 188 102 233 325 103 41.0 4e-22 MTEAAHDDYQLPEEFEHCLKLAPVRDAPSALDRVKQVVRILHEPGGCPWDGEQTNTSLLK PLLEETYEYIDAVETNDRDNMREELGDMLLQSVFQAQVCAVDAQDPFGIDEVCNRLVDKL ITRHPHVFQSDDATDASAPAPENAQDTLKLWEAMKQKEKHRKSMLEGISHAQGALPRATK IVSRVHKSQYCDQLETAFTTSASQMDEQHDGDHPYADEIIAIIRKAQRDGVDVESDLRCR LRDIESEIEHIERTMNHE >gi|222441570|gb|ABXX02000003.1| GENE 262 279567 - 280985 1253 472 aa, chain + ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 7 467 3 438 450 345 38.0 1e-94 MSDVKALDPALLKQYSTDFNADRANLVAANAAVSSGVLAAATDYKGERVLQNDFSIELKQ GSITNQRSSGRCWMFAALNTLRYELMHRWNLEDFEFSETYLFFWDAMEKSNTYLENVLAT LDEPLDSRVFEAINYGPADDGGWWQMFADLVNKYGLVPKSAYPESANSKSSDAFKQYLNT KLREFASDLRDRHTAGTSLDELRALKNADMATVYRMCAIALGEPPERFDFLARTSDDKDD GKKKTTGEGPSEKAAKTGKDERPQIREFGITPMEFYKKYVPVDVNDLVTLCNVPMESRPF GKRYRIRFSANVAEAGDMEFVNVPLDVFKKAAVDQISDGHPIWFACDCMQFSLRGDGYFD CDTVRVDQLFGTKFTFDKAKGLEYGDCPSNHAMTLTGVNLDADGRPNRWKVENSWGKDNG QDGYYVASDAWFDRYVTELIIRKEYLDETTREILADQPVELEPWEPLTKRSR >gi|222441570|gb|ABXX02000003.1| GENE 263 281110 - 282063 1111 317 aa, chain - ## HITS:1 COG:SMa0636 KEGG:ns NR:ns ## COG: SMa0636 COG0517 # Protein_GI_number: 16262787 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Sinorhizobium meliloti # 170 309 1 137 217 71 32.0 2e-12 MPRNGKEGILFSFIMSAIMIYVMAALNYGVRIGDVGAAAWSYALFDWPLAYVVGMICDLC ICTPSSRAIMNTFCAATDRAVWKGITVKFLMVVLMTVFGAIMAFGFTFGAFTGFWRMFPY NFTIALPIQMLIVAPLSGKIVHAIGDAAGWNKSAQQHVPALDVKTVADVMQHDVYTVASD AEVRDAVRMMLEKNISGMPIVDDERHVVGFISDSDVLRRFAQDNAPVSDISTLVTGMARG EFPELSHAELLDMNVMVIAAKPAVTVQSDANIAQVCQMFGYQQYKKVPVVEQGKLVGVVN RGRLTRRSFEACLGTAE >gi|222441570|gb|ABXX02000003.1| GENE 264 282413 - 284014 188 533 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 327 518 2 216 245 77 29 1e-12 MAIEAQELEIQIGARTLLHPTNFHVAKGDKIGLVGRNGAGKTTLTRVITGDMLPTAGKVR VSGKLGYLPQDTHAADPEQTALDRMMSARDIASIISRIRKAEKEMTDPDPDVMTRAMNRY DKAMQDFEKAGGYAAQSEATAMAASLGLPQEVMGQQLGTLSGGQRRRIELARILFSDADT LILDEPTNHLDADSIEWLRGYLKKYEGGFLVISHSTELLDEVVNKVWHLDAQLGQIDMYS LGWKAYLHQRVVDEERRRREREVAEKKAERLMQQGIRLHAKATKAVAAQNMMRRAEKLLE NTSEAQKQEKVADIRFPEPAPCGRTPIMAKDVSKAYGSNIVFAGVNLAIDKGSRVVILGY NGAGKTTTLRLLAHLEEPDTGSVDYGHGCKIGYFAQEHDTLDLNATVLENLIHVAPELND TQARSILGSFLFSGDDALKPARVLSGGEKTRLALATLVTSRANVLLLDEPTNNLDPASRD EILKAIAKYEGAIVLVTHDEGAVQALNPERVLLMPDGDEDLWNDSYLELVAEE >gi|222441570|gb|ABXX02000003.1| GENE 265 284241 - 284846 575 201 aa, chain + ## HITS:1 COG:MT2103 KEGG:ns NR:ns ## COG: MT2103 COG1335 # Protein_GI_number: 15841531 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mycobacterium tuberculosis CDC1551 # 3 200 2 182 186 157 43.0 1e-38 MKKALIIVDVQPTFCEGGELGVAGGNAVAERIADYVNAHRGEYEYIATTQDWHIEPGSHW SEQPDYVDTWPVHGKAGTPGAELHPAIAALHVEHHFKKGQYSPSYSGFEGYEDNTDSIPS REQVASDMATGRTLVVALESAGIECVDVVGLAESHCVKETALDARKLGLEVHVIENLTEP VSEELGIAARQQMLSAGVILD >gi|222441570|gb|ABXX02000003.1| GENE 266 284870 - 285247 347 125 aa, chain + ## HITS:1 COG:lin0580 KEGG:ns NR:ns ## COG: lin0580 COG3695 # Protein_GI_number: 16799655 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Listeria innocua # 6 89 6 84 98 83 51.0 9e-17 MEKGLFSRRVYEVVRRIPKGKVATYGQVAALAGAPRNARFVGYALHSNPEPGVIPCHRVV FRDGSLAPGFAFGGPERQRLLLEEEGVVFISPKGMPELSESGKMKDSNAGASGLRVDLAR CQWDA >gi|222441570|gb|ABXX02000003.1| GENE 267 285869 - 285988 148 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNENSDIIFVPDDSASHEWTERDSELVEEYAAQLMSMSI >gi|222441570|gb|ABXX02000003.1| GENE 268 286000 - 287649 1295 549 aa, chain + ## HITS:1 COG:no KEGG:BAD_0844 NR:ns ## KEGG: BAD_0844 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 52 548 1 497 498 733 79.0 0 MGPGSLFHDRKRRRIRTVTAASFPCFRLEWRLAAKASNTWKGVLLAEIRREMERLRPVYE TGVLRLLLRNNSMLYVALLRSTFDPLTGELPREIVEERFARSLNRLIETGDYTLKDGQTA REAAHSVLLDLAREGEGDYAWLANSMDVASHRYLYRLTARAHRAIEALDRLEDTTKALSG AQANSIIMEIEHARMQLTADPRERIRLLKRDIEERQKEIDELEHSEALEKLTSEQVGDII GVIHNTLRGVPIDLRELALSERDNGDALRRRMQAGAMSVESILTAYHDEYRRAFRESDSG RRFEDAFQVIVTDEGRREIDDAVRDIARNPYLDGEPSVLLNQVRSELKRIYEGIEDVRRQ IRTSDEAVSRLVRQQTDTSYRTMLAKLNQLFAKTSAEAKAHPNDQSRPYHTDAGQAKFPT LPSRPARSMARAASSSLNDAPAATIEAPDLKNMVEICGPRLTRMIRLIRSNPVTTSDGMF VDLAASFNQLPKAERRESELVGFLSALRTQDDSSYVTWRCISIDGSERVWRTKPILITET TLDDIIEER >gi|222441570|gb|ABXX02000003.1| GENE 269 287652 - 288434 913 260 aa, chain + ## HITS:1 COG:no KEGG:BAD_0843 NR:ns ## KEGG: BAD_0843 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 32 227 37 232 279 302 84.0 1e-80 MTDYIEANIEETILTEGEPVLEEAGSQQASTALFNGDTGDMPVEARMAAIALKRERYIDG SLYDLACENREVVERSLNNDMLRLVDNTKYRIMYASPVTDSETCIRSLKTRMSLTREEAA TLAALRIKALEYENQNAEPCDWLISFDDIRALLATGAGFLTASNDEEGTAKKITSIISRM RTYGYLAPIEDDDMYVLTPLVPMVLDRGLADQWLGSETTDENAFADGRTNAGPDDRPMED IEQDAFDFNTDDNRFDEEEH >gi|222441570|gb|ABXX02000003.1| GENE 270 288434 - 291985 1186 1183 aa, chain + ## HITS:1 COG:Cgl2744 KEGG:ns NR:ns ## COG: Cgl2744 COG4913 # Protein_GI_number: 19553994 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 11 975 14 956 1111 87 20.0 2e-16 MADGMKIVSDKWMLQSRQIVNWGSYGGWHEFRPSMDETMPVTLLAGASESGKSTLVDAQI SLLYPSGTPYNKASNSGRSERNDYTYLRGMIGVSDSENGETPIFLRGKDADGTPQNIWGA IVDTYVNKTDGGLLSCGKFLYLNAGDGQDGLRRRYITWNRTIDPRLMDQYRNTPFTRSMF EKTYPECTTHTNAAAFHASIWQDMGLSADACRLLHKIQSADAPSKLDDIFKQGVLDIPES IRLAHETVDDYNRFNENFHSMEDKMARVAILQNIQTRYGEYAKQTTERREYEPINPDSEH GNATLSAWARSRMASEVRAGLPAAQRKVKESQEAIDRAMQRVGELNTRIDAVKERIQGID GGSLQQLGKDLQRVRQDIDEASRQRHAIAERFEQVEGRLPDSEQTWDAKRAMLAETLDTY EERLKDANARFQQLVGERHDRQRDRDSLRRDYQRKLTHRTRISDDMDDARTLIMRATGLD ASELPYVAELMDVNEQDEQWRLAMNVTYAPIAQTILVDKRHEQGFAAKISAIDPKLMTRR TWRFIDTGMQYESSASEGWMSSKLQYREDSPFAGWLKNQTTSPRFDARCVHAIDDMNHDE RQVQADGQIKSGDRGFHGSKGLHQVIGFMNEQYLAELKNQLDKAEQALQNADRRSEQMSN AISLLQDEHELARIVADMPWSKIDVNGLREQETRIRRQIERIENDPELGQLQTELKQLNQ QATAENRNQYQAEDDLDKAQHAVQAEQAWLDAYGNDDFDDATLSSMVSNLLADAYENCFG ASVRAQDRPKLIAGLFDHESETPFHARALRNIARIARTRIQEIDARSNQLRADTERIMDD YLNNHSTDDNTVMASVEDYRYFLDELDELNMLVTRAATDEEYANSVKKLYMSFQQLNRAL RTDEENIKEQLNRINSMLKGQQFGPQGGRLSLDVTFSPIDRQFETTLSRILSKTGRLDAQ RKRQSHGNTQSIQQLRNIREQTAQRTRQNTRHQRHQSIRRTQPRPTRTQLILRNRAPRQR PRRTHQLHRRKIRRSPPRTHLIRLRRGPHLPPRRRPHRTPHLHHALPRRSTHQSRRPLHQ TRARRTTPTRLPNHRLRPGKQNRGNPQRRQQSIRRIQRPIHRQLIPTGTRQRNHHTGRNT AHHRTRETNNGGITHGNGQKHHQQRHPQPTQRIRHRLSHQAHV >gi|222441570|gb|ABXX02000003.1| GENE 271 291897 - 293099 714 400 aa, chain + ## HITS:1 COG:XF2735 KEGG:ns NR:ns ## COG: XF2735 COG4924 # Protein_GI_number: 15839324 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 34 379 34 381 401 65 24.0 2e-10 MATARSTTNSDIHSQLNGYVTDYLTKHMYDANTSWPLRKTIRLPKQAELEAHYTHIRAQD EAIRNWAQQHHCETSEKTKIISNGIVRQTSQLIDSVTIPDLNTALNITTPQTRKLYQREH QRAHTITNQFNLDSNTSINIAKILKNHDDTDFNLVIQAAHYFANHNTENMTPRMVPIPGF SAKWLGKTTSNRCKAICKLLKREQLALNDRHGEIRLRLLDTQHHNQPDLIVTQPWTDGAP HDITHIIIVENKDTYQAIPTTEHAICIFGSGHAATRIKTLLPWITTTPHIIYWGDIDADG LEILSELRQTGITCDSILMDSTAYKTYEPYGTKLDTKKQPLKTRDPKPTPGLTQHERNLY EQLCTGKNTTYLRIEQERIPINDAMTILHNQHQWNTTHHK >gi|222441570|gb|ABXX02000003.1| GENE 272 293179 - 296166 3243 995 aa, chain + ## HITS:1 COG:MT1675 KEGG:ns NR:ns ## COG: MT1675 COG0178 # Protein_GI_number: 15841093 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 53 991 12 957 980 1315 68.0 0 MATKRNNAANGDVIVERVLTSDAFLAREIKKAPLKTKNGSLTADLKHLPNDLKITIQGAR EHNLKNVDLEFPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMDK PDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGIPHCPECGALVSAQ TPQQMVDALLQYPERTRFQILAPVVRGRKGEFEDLLELLRGDGYARALIDGEMKQLSDDI KLTKQKKHTIEVVVDRLVVKDGIRQRLTDSIETALKLAKGIVVADFVDLDEKDPDRRKPF SEKRACPNGHQLELDEIEPRTFSFNAPYGACPVCTGIGYKLEIDPELVIPDPSKTLNENA IEPWGMTKGTGEYYRHVLEGLGDEMGFDLDTPWKDLPEEARQAIMYGRDFKVQVSYRNRW GRMREYSTGFEGVVRTLMRRHDETDSDQMKQYYESYMREVPCQACQGRRLRPEVLAVTVG GESIADVCDMSAETSLAWMDGLQLEGSAAQIAGEVLKEIRARLGFLNDVGLNYLTLSRAA KTLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLITTLHHLRDLGNTLIVV EHDEDTIKNADWVIDIGPGAGEHGGEVIYSGPAKKLVDAPRSVTGDYIAGRRKIEVPQSR RKVRKTKQLRVVGARENNLKDLTVNFPLGVFTCVTGVSGSGKSTLVNQILYPVLADKLNG ARIVPGKHTRVEGVGQCDKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVRG YGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVDCEECHGKRYNRETLEVKYNGKSV ADVLGMPIEEAAQFFKAYPSISRYLDTLVQVGLGYIRLGQPAPTLSGGESQRVKLATELQ RRSTGKTVYILDEPTTGLHFEDVRKLLLVLQGLVDKGNTVIVIEHNLDVVKSADWIIDLG PEGGDGGGTIVTEGTPEQVAQCEQSWTGKFLKGML >gi|222441570|gb|ABXX02000003.1| GENE 273 296163 - 298466 1448 767 aa, chain + ## HITS:1 COG:ML0562 KEGG:ns NR:ns ## COG: ML0562 COG0322 # Protein_GI_number: 15827213 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Mycobacterium leprae # 50 752 7 646 647 581 45.0 1e-165 MSAPIERHSQEVWRKTAEQLNGDGFSVGGDDSPGKDVNKNGALGDSRDLFRPKTSDIPAQ PGVYKWRDGEGRVIYVGKAKNLRNRLTNYFQPLYQLHPRTQTMVLTARNLEWTVVGTELE SLTLEYTWIKEFDPRFNVVFRDDKTYPYLAISSGERVPRVWVTRSRKRRDTRYFGPYAKV WDLRHSLDRLLKTFPVRTCSQNVYHKAEITHRPCLLASIGKCSAPCIGRISVEEHRKMCE QLIGVLTGRIGKSYIAQLTREMKEASDELEFEKAARLRDQIQMLSTVGEQNAVVFDSDVD ADFFGVDSDELEASVHAFYVRAGSIRGERNWSVERVEDVTDEELIADLIVQVYSETAGET IRASQSTVVTEQRNAIGSTQIVTATDAVARAQATRERNERQDQTGRADLLAPISPVPREV IVPIEPARREELESWLSGLRGGAVSIRVASRGDKRRLLDRANDNAKQAMQRSKMSRISDM GARSTAMNDVAKALGLEQAPLRIECYDISNTVGGAFQVASMVVFEDAIAKKSEYRRFAIR GADGQGALDDLSALYETLTRRFQHGNIAGDSGESMDNERRASEHGDQTHEPTVQQNTNRH HFAYKPNLVVVDGGKPQVMAAAKALEDCGVDDVAVCGLAKRLEEVWVPDDDYPIILKRQS EGMYLLQRVRDESHRFAITYHRQTRRKGALRSALDDIPGVGEAYQKRLLSHFGSVRAMRE ADVEDFEQVKGVGKAKAAAIYQALHAHDGQPSTENAISSNSPKDEME >gi|222441570|gb|ABXX02000003.1| GENE 274 298533 - 299477 806 314 aa, chain + ## HITS:1 COG:Cgl1591 KEGG:ns NR:ns ## COG: Cgl1591 COG0169 # Protein_GI_number: 19552841 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Corynebacterium glutamicum # 2 314 3 270 276 127 33.0 3e-29 MTEVNHRCAVLGKPIAHSLSPVLHNAAYHALHLDDWSYDKHEVGEPDLEGFLESLDPTWS GLSLTMPLKKTIQPYGTPCNTWAKELMVANTAVFDWTKTCVNGNSNIPFIRLYNTDVRGI ELAFEHSYQTRAITPKTDRSGTAVIIGNGNTATSALAACVEMSAIGHVIVVARHPEKNAD LKPLAERYMPSEQPISIVGMDHAIEALRQADVAINTIPGLAADGIAESLRMPGVRMHGTL LDVVYDPRPTKLMQAWRQQGGIAIGGEQMLLYQAMVQVWLMTGIWDDDPPSGMVDQDCTA RLEQAMRIALEEAL >gi|222441570|gb|ABXX02000003.1| GENE 275 299477 - 300409 812 310 aa, chain + ## HITS:1 COG:MT1464 KEGG:ns NR:ns ## COG: MT1464 COG1660 # Protein_GI_number: 15840878 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Mycobacterium tuberculosis CDC1551 # 19 305 12 300 301 281 50.0 9e-76 MAQKDIDVQANGTHASAPSPAEGFEVLLITGMSGAGRSHAADSIEDMGWYVVDNMPPKLL VPLVDMMTTGSNIHKLAAVVDVRSRDYFDDLSAVLSHLDDLGVKTRILFLDASNEVLIKR YESVRRPHPLQQGNRLIDGILEERDLLENLKERADIVIDTSSLSIHQLSTKLYEAMLGSG PTTVSVHIFSFGFKYGIPIDADFVADVRFLPNPFWVPRLRSLTGRDKEVSDYVLSSEGAA DFLDSYEKALSIAIEGYAQEDKHYVTIAIGCTGGQHRSVAMSEALAKRLRARGLSVSVSA RELDKRSAEK >gi|222441570|gb|ABXX02000003.1| GENE 276 300559 - 301509 1188 316 aa, chain + ## HITS:1 COG:Cgl1551 KEGG:ns NR:ns ## COG: Cgl1551 COG1481 # Protein_GI_number: 19552801 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 307 1 305 327 235 46.0 7e-62 MALLDDVKSELAAIDNELPIAKKAQATAMIRFGNGLHSVDHHILVQVQLDSQDAAAWLQD TIKNLYGHEATLTPVSRQTPTGTVQRYVIRVPKGSTALVLQTGLYSRYTKNMVLGLPSDI INGKIAQIKSAWRGAFLANGRLSDPGKASYLEIVCPNHEAALALVSTARRLGITAKPRKL RSSERVTLRDPDAIERMLILMGAPRSAREWTGKRSDGEARGKANRLANFDDANMRRSAKA AAEACDKVRQAFEILGDDIPDNLKSAGQLRLDHADASLEQLGRLADPPITKDAIAGRIRR LLQLAEKTEKARRQSA >gi|222441570|gb|ABXX02000003.1| GENE 277 301639 - 302844 1710 401 aa, chain + ## HITS:1 COG:Cgl1549 KEGG:ns NR:ns ## COG: Cgl1549 COG0126 # Protein_GI_number: 19552799 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Corynebacterium glutamicum # 1 400 3 403 405 387 56.0 1e-107 MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKALREEGAKVILMAHLG RPKGKVVPELSLAPVAARLGELLGIEVPLAEDTYGEDAQAKVAAMGDGDVVLLQNVRYNP EETSKDPEERAAYAKKIAALGEAFVSDGFGVVHRAQGSNYDVAADLPAAAGLLVEKEVKA LSRATVEPERPLTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVYTFLKAKGLEVGTSL LEEDQVETVKGYIERAEQNGVELVLPTDIVVNPVFPKSDEDIAPEVVAADAIPADKMGLD IGPDSQKLFHDKIVDSKTVVWNGPMGVFEVPAFAAGTEAVAQGLVDATAAGAFTIVGGGD SASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVLD >gi|222441570|gb|ABXX02000003.1| GENE 278 302973 - 303767 613 264 aa, chain + ## HITS:1 COG:Cgl1548 KEGG:ns NR:ns ## COG: Cgl1548 COG0149 # Protein_GI_number: 19552798 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Corynebacterium glutamicum # 5 248 3 244 259 226 47.0 3e-59 MASQRIPLVAGNWKMNFDHLEATYFVQQLAWKLRDIHFDYRHCEIALMPSFTSLRSVQVL VESDNLKIHYGAQAVSVTSQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDANIVD QVRAVLAAGMQPILCVGESYEERRKGIELDFAVGQVHDVTRDLSDEEASRLIVAYEPIWA IGSGMVATPQSAQDAAKAIRDDLAETFGTHVGESVRILYGGSVSSKNAEELIGEPDVDGF LIGGAALNVDELTRICQLTMNATV >gi|222441570|gb|ABXX02000003.1| GENE 279 303883 - 304140 338 85 aa, chain + ## HITS:1 COG:Rv1440 KEGG:ns NR:ns ## COG: Rv1440 COG1314 # Protein_GI_number: 15608578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Mycobacterium tuberculosis H37Rv # 2 82 36 116 117 59 43.0 2e-09 MSAMAIVKLVLQIILVIFSLLLTLLILMHKGKGGGLSDMFGGGLTQNAGSSGVAEKNLNR WTVIIAVLWVAIIIALGLMTKFDLI >gi|222441570|gb|ABXX02000003.1| GENE 280 304275 - 305087 678 270 aa, chain + ## HITS:1 COG:Cgl2829 KEGG:ns NR:ns ## COG: Cgl2829 COG0561 # Protein_GI_number: 19554079 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 1 266 10 275 278 79 27.0 9e-15 MVVADLDGTLLHDGETFEERFLTQRSIDVINRMHDNGVTFVVETARPVSTGFSFVEKLPV DAVAYLNGALIDFNPASSNYEMLTSPMLPEDGHLKKIGFSSQRACEVCKNLLNELPGMEV GIVMDDVRYTNFDVTKYWKTQTWRYTDFDDVPEGIADKLIIFPNDEQRNQVGSLVPNDFD VHISEGSLWMLMNPQANKEHALDLLAEHFETPMSNTVSFGDDLVDIAMLRKSGRGVAVAN ANPDVLNIADEICPSNNDDGVAQWIEDNLL >gi|222441570|gb|ABXX02000003.1| GENE 281 305256 - 306791 1404 511 aa, chain + ## HITS:1 COG:L162604 KEGG:ns NR:ns ## COG: L162604 COG0436 # Protein_GI_number: 15672142 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Lactococcus lactis # 107 510 1 404 404 585 67.0 1e-167 MAESFSNRLNVAMAFRNVKQIDFVHAAEKFNIKLGKSHMSQYVSGKTVPRADIAHFLAAF LQVNEDWLMGKDVPMEQNVATLPAIKSDEAQHDSNPASAQSTEGKTMRTFTKSHKLDNVL YDVRGPVADEAARMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLPETEGYSPSKGL FSARKAIMQYAQLKNIPNVSIDDIFTGNGVSELINLSLSALLDDGDEVLVPSPDYPLWTA CVNLAGGTAVHYICDEGSEWYPDIDDIRSKITDKTKAIVIINPNNPTGALYPKELLQQIV DIAREHQLIIFSDEIYDRLVMDGLEHISIASLAPDLFCVTFSGLSKSHMIAGYRIGWMIL SGNKRIAKDYIEGLNMLANMRMCSNVPAQSVVQTALGGHQSVKDYIKPGGRVYEQRELVY QMLNEIPGVTAVKPKAAFYIFPKLNVKKFNIHSDEQFALDLLHDKHILISHGGAFNWQNP DHFRVVYLPRITMLKETVSEIGDFLSTYHQA >gi|222441570|gb|ABXX02000003.1| GENE 282 306727 - 306930 87 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRWLGPKAGAIVALLMVSMTISIWGRSVAMLRVLHTMKALQAIKVIMPDDMCSRNHRSH LRFPLTS >gi|222441570|gb|ABXX02000003.1| GENE 283 306896 - 307117 304 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352090|ref|ZP_03743113.1| ## NR: gi|225352090|ref|ZP_03743113.1| hypothetical protein BIFPSEUDO_03700 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03700 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 73 1 73 73 131 100.0 1e-29 MAPALGPSHRFIVKGDIVNDLLKGIGNVVNPKRVFRELTDFKPGEFVLIAVMLLAQLVSF FVSKDFPRQVELV >gi|222441570|gb|ABXX02000003.1| GENE 284 307135 - 307752 579 205 aa, chain + ## HITS:1 COG:PM1838 KEGG:ns NR:ns ## COG: PM1838 COG3201 # Protein_GI_number: 15603703 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pasteurella multocida # 4 177 53 222 234 75 30.0 7e-14 MFNLILVDRGRLTNYLWGFIGCATWLIVAIMNHLVGDIFAQIFYVTMQFVGVWVWQRQLD RQEKNEYEEVNARMFTWWQGILAVIATIVIYLIVVFVSSHTGGVQVRLDGTLLPLGIVGQ ILMTYGYRSQWVAWIILDVIKVVIWFNQLSAGGPGAMSMFVLQVVMLANGFYGAWVWFHK SSTMAVSDDLQSSICTESIIANGGR >gi|222441570|gb|ABXX02000003.1| GENE 285 307791 - 308018 131 75 aa, chain + ## HITS:1 COG:L0242_2 KEGG:ns NR:ns ## COG: L0242_2 COG3172 # Protein_GI_number: 15673969 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Lactococcus lactis # 2 74 7 79 201 60 53.0 7e-10 MVVGPASVGKTTLVTRLSKLYDAPITVEYAREFEEACNVDDDELTAFDYERLILSKFSQN EHAIASHANHGIVFS >gi|222441570|gb|ABXX02000003.1| GENE 286 307990 - 308112 82 40 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352093|ref|ZP_03743116.1| ## NR: gi|225352093|ref|ZP_03743116.1| hypothetical protein BIFPSEUDO_03703 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03703 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 40 1 40 40 70 100.0 4e-11 MPIMASFFLDTDAMVTRVYAERYLPADENAKLQADIRYGD >gi|222441570|gb|ABXX02000003.1| GENE 287 308102 - 308362 137 86 aa, chain + ## HITS:1 COG:L0242_2 KEGG:ns NR:ns ## COG: L0242_2 COG3172 # Protein_GI_number: 15673969 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Lactococcus lactis # 3 78 111 193 201 68 43.0 2e-12 MVIEQEKPDLVLLIPPITEYVDGGFRAMRWASDRYRFHETLVRVIQESPYADRVVTLDNP TFEGRKTQAIQAIRQATGFTPRTGIS >gi|222441570|gb|ABXX02000003.1| GENE 288 308452 - 309555 1684 367 aa, chain - ## HITS:1 COG:Rv1448c KEGG:ns NR:ns ## COG: Rv1448c COG0176 # Protein_GI_number: 15608586 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Mycobacterium tuberculosis H37Rv # 9 363 12 369 373 378 58.0 1e-105 MTEATQRTSDSGVSIWLDDLSRTRIESGNLQELIKDKNVVGVTTNPSIFQKALSQVGPYD AQLKELGKVDVETAIRELTTTDVRNATDIFREIAEATDFVDGRVSIEVDPRLAHETEATE QQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVNVTLIFSLERYEQVIDAFIEG IAQADANGHDLKHIGSVASFFVSRVDTAVDNKLEEIGSDEAKALEGKAAIANARLAYELF ENKFANDPRWAALEAKGAKKQRPLWASTGTKNPAYSDCVYVDELVAPLIVNTMPEKTLNA LADHGNGAPTIKGTYEESHAIMAKLAELGIDFKAVTDKLEADGVASFIKSWDSVLTDVQA GIDRVNG >gi|222441570|gb|ABXX02000003.1| GENE 289 309548 - 309628 76 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHVPLPFYRTINKDLIQKGIKEKNND >gi|222441570|gb|ABXX02000003.1| GENE 290 309648 - 311756 2913 702 aa, chain - ## HITS:1 COG:Cgl1536 KEGG:ns NR:ns ## COG: Cgl1536 COG0021 # Protein_GI_number: 19552786 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Corynebacterium glutamicum # 7 695 23 698 700 695 54.0 0 MTEFKETELDERAIKMAKVLSADAVERAGHGHPGSPVSLAPIAYTLYQHFIKHDPNDPNW EGRDRFILSGGHASLTQYVQLYFSGYGLTLDDLKNFRGGADTRTPGHPEYGLTPGIEMTT GPLGQGFASAIGFAYGQRFQRGLLDPEAPAGESPFDHNIWVICGEGDIEEGISGEAASLA ANQQLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDVEG LADTIAKAREAAPNQPKLIKVDTLIAWPTPGKTNDPSSHGSKLGAEAVAGLKELLGYDPE ESFHVDEEALAHARKVAERGLEAHKEWDEKYNAWRKANPDNAALYDRLKAGELPEGFDKA IDDLEATFEVGKGVATRGASGSVLNAIAAVMPELWGGSADLGGSNKTDLKGAATFAPAEC ATKQWPVCSPYGRQLHFGVREFTMGTITNGILLGSHTRPFGGTFFMFSDYERSAVRLAAL MQIPNLYVWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVVRPADAYETAEAYRYFFEKK NTLPAAMVLTRQGVPVLAETAEKAKDGVKKGAYVLVDTEGTPDVIIMATGSEVQWAVSAA KTLAGEGIKARVVSAPSLEWFEEQDAEYKEAVLPASVKARVSVEAGVAMPWYKYLGSYGK PVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEVEAAK >gi|222441570|gb|ABXX02000003.1| GENE 291 312149 - 313282 978 377 aa, chain + ## HITS:1 COG:ML0624 KEGG:ns NR:ns ## COG: ML0624 COG1420 # Protein_GI_number: 15827254 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Mycobacterium leprae # 5 364 7 336 343 219 40.0 9e-57 MTQSRRMLVLRAVVEDYIRSQEPVGSTTLTKDHDLGVSSATVRNDMAALEDEGYLIQPHT SAGRIPTEKGYRYFVDRLATVVPMSEAQRRGINSFLSGSVNLQDTLQRAARLLAQITGQV AVVAAPSLAKSTLRHIEIVPVSINTLLAVVITDTGRVAQHILNVSELPDTTVLSHLVNEI NAQCASVSLTRTADYVRQMSSRKEYRPISRLAETLAQAFDGMADDERASELYMAGTSRLA HQRAVADLAPLFDALEEQVVLMKLMSTLSETTQSDGVGVAIGSETHTPGLLHASVVTSGY GRTSATADDVTKGETAEEQGRETSNHTTAAQDSTEPIAFVGSIGPTHMDYAATMAAVRAV ARYLTAFVAHDENQNNS >gi|222441570|gb|ABXX02000003.1| GENE 292 313336 - 314484 1231 382 aa, chain + ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 3 381 4 375 378 277 42.0 2e-74 MTDYYEVLGVDRSASDDEIKKAYRKMSRKYHPDIAGPEFEDKFKEVNNAYEVLSDPQKRQ MFDAGVDPNDPNAGGMHGGFSGGFGDMGDIFNMFTGGAFGGGNGGPTPRTQPGRDALATV TIDLKTAVFGDTAHVEIKTFGLCQECAGTGCQKGTQPAQCPDCHGQGYAQRVVRTMLGQM MTTAPCERCEGHGTVIENPCPSCLGHGRVRITRNVGVSVPAGVTNNTRLRLANQGEVGEN GGVAGDLYVDIRIAQDDTFTRNGDDLHCWIQVPMSWAVLGHDLEIDTFDGKQSVRVPAGS QPDDTVTLKNLGVTHLNNKSERGDLVAHIAVKIPTKLTDDERALMERFAEKHDTDAQHVA VSARPTSGTKKGFFSKLKDALR >gi|222441570|gb|ABXX02000003.1| GENE 293 314651 - 315442 716 263 aa, chain - ## HITS:1 COG:Cgl2483 KEGG:ns NR:ns ## COG: Cgl2483 COG3001 # Protein_GI_number: 19553733 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Corynebacterium glutamicum # 19 263 17 246 249 148 37.0 9e-36 MSKYRKSRAFSPEGFFECEGRGLQWLGEAQSKGGPRVVDVYDWGKDYLNIERVNACGPTL QAAHDFGAALARMHDAGADYFGSAPAGYTGTCYFGPLQDPVPMDAGEWDDVATYLAEGRL RPMVQLGMKRRELTDYDMELTEAVIEALPEILGKAANDKPARVHGDLWSGNVMWSADSGS VEAVLIDPAAHGGHREEDLAMLDLFGMSYLRDILDGYQSVHPLKAGWQERTTLWQLYPIA GHCVFFGGGYVNQYRAMCRSLLK >gi|222441570|gb|ABXX02000003.1| GENE 294 315642 - 316526 1244 294 aa, chain + ## HITS:1 COG:AGc1833 KEGG:ns NR:ns ## COG: AGc1833 COG1968 # Protein_GI_number: 15888341 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 286 3 275 278 234 49.0 1e-61 MNFFQAIFLGLVQALTEYLPVSSSAHIRIIGDLMLGSDPGAAFTAIIQIGTELAVILYFR HDIIRILGAWFGSLFGKEGKDFKSRMGAHNPDTQMGWFIILGTMPILIAGLLFKHAIEGS LRNLWITVTVLALFGVLLWVVDARSKQVKTMKEMTWKDALIFGIGQMLALIPGVSRSGGT ITFGRAMGYTREAAVRVSFLMAIPAVFGAGILEAVSAVKDVAAGDAGMFPGWGPTIAAAI VAFVVGYVVIIGFLKFVSTFSYKAFAIYRIGLAIVVALLLITGVLSPLEAAAAA >gi|222441570|gb|ABXX02000003.1| GENE 295 316622 - 317446 721 274 aa, chain - ## HITS:1 COG:no KEGG:BAD_0824 NR:ns ## KEGG: BAD_0824 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 272 1 272 275 476 81.0 1e-133 MCEETKKRETIMISAFEGWNDACQAATNVIRHLVSRYDSQEVHHIDNEGFYDYQVARPMI CSVQGRKRIIWPQTTFYDIAVSPSLHFLAQIAPEPNYRWEEYCRQTLRIAEDYDVSGIVT LGSMFDDCPHTRPLPLDISKNDCESEPDKEYNGPVGIPNILDAFAADAGFHTTSMWVSVP HYCANTECLQGTLELVRALSLLLEHPLTEGDLNRKAAEWRKAADEIVEQTHAGDYLACLE RDYDLNAQAQRIASNGMPACEELIREAESFLRGN >gi|222441570|gb|ABXX02000003.1| GENE 296 318175 - 318384 241 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352102|ref|ZP_03743125.1| ## NR: gi|225352102|ref|ZP_03743125.1| hypothetical protein BIFPSEUDO_03716 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03716 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 69 1 69 69 135 100.0 1e-30 MVLVLGAIAIHGAYTSRQRNINQKVEQDLRGKLGLPATGEIYYVQDRPLYQEYENLVLTT YDKWFGYHP >gi|222441570|gb|ABXX02000003.1| GENE 297 318452 - 318625 187 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352103|ref|ZP_03743126.1| ## NR: gi|225352103|ref|ZP_03743126.1| hypothetical protein BIFPSEUDO_03717 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03717 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 57 1 57 57 96 100.0 5e-19 MVILTDYKESVDIGWYQMSSSTDEPDDLVQAGIDEFQNYENQFLKDEDLVRPILMLL >gi|222441570|gb|ABXX02000003.1| GENE 298 318733 - 318897 168 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352104|ref|ZP_03743127.1| ## NR: gi|225352104|ref|ZP_03743127.1| hypothetical protein BIFPSEUDO_03718 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03718 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 54 1 54 54 75 100.0 1e-12 MGADKSQIESTQGEDYKMTQQSDAVAEAIHSGDAPNSRRAVCNKALREMIDEQR >gi|222441570|gb|ABXX02000003.1| GENE 299 318968 - 319195 184 75 aa, chain + ## HITS:1 COG:no KEGG:BDP_1154 NR:ns ## KEGG: BDP_1154 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 15 75 2 62 62 94 77.0 2e-18 MFFQGVRLQWQLVSDEALNLNQPVKDMGPNELKAYARLGKQQHDEANRELERRWRSYDDM LPNDQFVSIIDKTEG >gi|222441570|gb|ABXX02000003.1| GENE 300 319269 - 319718 400 149 aa, chain + ## HITS:1 COG:Cgl1406 KEGG:ns NR:ns ## COG: Cgl1406 COG1716 # Protein_GI_number: 19552656 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 7 145 8 142 143 107 43.0 9e-24 MATMTDPIPSAGETTIIGLPAITVPVTSTGDRPLTKEDLETIMRLADGTALLISTRGAVS GSRYLLDEDEITVGRDPRADILLDDSTVSRAHAVFRRSDGRYSVIDAGSLNGTYVNRQRV DQQELKNGDEIILGKFRLVYFDNKAVIAG >gi|222441570|gb|ABXX02000003.1| GENE 301 319817 - 320440 414 207 aa, chain + ## HITS:1 COG:MT1879 KEGG:ns NR:ns ## COG: MT1879 COG0789 # Protein_GI_number: 15841300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 15 169 45 201 225 147 48.0 2e-35 MNEAEPTTRLRLHVSTAVQGELFPATGTQPVTRGYKGTVASKVAGITYRQLDYWARRQIV EPSITPSHGSGSRRLYSFKDVVILAVSKRLLDAGINLQNVTTAISFLTQRTAEQLENITI MCDGQQVHECTDSEQMVALLQSGRAVFGVSVGSLWKQIRETLAHEEYVDLTTMPSMMGGN RPVDDITAMRMRKNFEAQHQTRAAASL >gi|222441570|gb|ABXX02000003.1| GENE 302 320413 - 320604 117 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFNDMTAATIHSNAGRISNMYCSPVVCLSVHIYLISTTRTSVLVRINHTACILVCYSDAA ARV >gi|222441570|gb|ABXX02000003.1| GENE 303 320546 - 320914 360 122 aa, chain + ## HITS:1 COG:no KEGG:BDP_1157 NR:ns ## KEGG: BDP_1157 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 118 1 118 127 170 66.0 1e-41 MFDILPALLWIVAAVISLNICSITAIRGNIFSKTKSDVYPVRWSIVGLHFTSLIIGALPY PIYTMFKPSFSLKFQHFYEQVGWPSAALMVMLIATELVFMYLQARNGMKSEMERKLSQAI KD >gi|222441570|gb|ABXX02000003.1| GENE 304 321267 - 321989 871 240 aa, chain - ## HITS:1 COG:all2681 KEGG:ns NR:ns ## COG: all2681 COG0546 # Protein_GI_number: 17230173 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Nostoc sp. PCC 7120 # 11 235 5 214 215 125 34.0 1e-28 MSEKTKQPKKVVLLDLDGTLTKSDPGIIGCVVKVFEELGYPVPDDEELQRFIGPAIVESL QRNNIPDDLLDEGIAIYRRYYAQEAVFDDPNNPGQKVPGRLNNTIYDGIPEQLAKLRADG YYLAIASCKPQYQCIPICEHFHLDTMVNGIYGASEDNSRLDKDQVIQWAFDHIGFDEAAG DKALMVGDRWTDADGAKACGLDCLGCGWGYAEPGELKEHGAYKVIDSVSELAQTIEDYFA >gi|222441570|gb|ABXX02000003.1| GENE 305 322101 - 322448 387 115 aa, chain - ## HITS:1 COG:no KEGG:BDP_1159 NR:ns ## KEGG: BDP_1159 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 115 1 115 115 208 94.0 5e-53 MAERSLRGMSIGAKSLESDDNVDFAARNDVAYVCPKGHRTILPFAEGAEVPEEWECRCGM TAHREGDEDREADEISKPTRTHWDMLLERRTEDELKTLLEKRLQMHRDGWFPDYE >gi|222441570|gb|ABXX02000003.1| GENE 306 322544 - 325144 1812 866 aa, chain - ## HITS:1 COG:Cgl1453 KEGG:ns NR:ns ## COG: Cgl1453 COG4581 # Protein_GI_number: 19552703 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 36 539 5 503 929 497 53.0 1e-140 MTHHRRRNNGIDPSKINETVELSPAQRYAAFKQTQAKQRTVAAEFARSMPFELDEFQMQA NDALEAGDNVLVAAPTGAGKTVAADFAIYLAQTRNVKAFYTTPIKALSNQKYHDLVDQYG TDKVGLLTGDTSINSEADIVVMTTEVLRNMLYEHSVTLEALRYVILDEVHYLADRFRGPV WEEVIIHLPKNVNIIGLSATVSNVEDFSEWIESVRGKTTLVMSEQRPVPLEQHVLVQADD HTEPELIDLYRRDANGEQTVKLNAQLINRLDQLDRQAERRKGERRPDKRRAKGKGGRWDD RPHKVERHTPRRWAVVDELNFLDMLPGIYFIFSRNGCDQAVDQCINAGLELTTSDEVQQI RRIVDEMVEGQLSQEDLKALHFSQFRFALEEGFAPHHAGMVALFRQIVERLFEEGLVKMV FATETLALGINMPARCVVVEKLEKFDGTGHVGLTPGEFTQLTGRAGRRGIDTIGHAVVVD HHGFVPATAAALSSKRVYPLHSSFRPTFNMAVNLLNSSDYETARVTLDHSFAQWEANESA WQLEAQMETLCKALEGYEQAFQCEFGDFKKFMRLRMRLSDLEKNERRKLKHEVFRTQKER SQAFMDLDKRIKKLREEDRDHPCRKCPDVQKHLKWGHRWAREMRELERVQHRYDSRTGSV ARQFDHICAVLSNLGYLQPVRESAGHGDYQLTERGQLLRHLYSELDLVLAQAIDDGAFDG LNACELASVVASLVFEARRGGGGEPRRYPGGIQGNVAVCAAQLKGVHASIAMLCEDHMLE EPRQLDFGITDIVYDWAQGESLSQVLYGTDLTGGDFVRNGKRLADVLQQIAVAGPYLADR AETLAPVAKQAYDRINRGIVAYSGVD >gi|222441570|gb|ABXX02000003.1| GENE 307 325165 - 325482 151 105 aa, chain - ## HITS:1 COG:no KEGG:BDP_1161 NR:ns ## KEGG: BDP_1161 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 105 1 105 105 147 66.0 2e-34 MPWWIWLLLALFMLAMVVSGVVYACLHGYRAFKDVAKLGERTAKRIEAMGKPLPQNNENE APFFTRPLKDAADRYADAHAGVIERHEAKRSRHAQQWAQWRHCND >gi|222441570|gb|ABXX02000003.1| GENE 308 325496 - 327406 1828 636 aa, chain - ## HITS:1 COG:no KEGG:BAD_0817 NR:ns ## KEGG: BAD_0817 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 635 1 636 637 1145 94.0 0 MAEGSNGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKA AFAKQFQRDRAKLAAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRVRLLFGDEDLPI LAAANYLARSMSISSAPAHETQHTSRTAPRVPQTPTPGLGLDSIAPGLGTQSIPDELVKV VDQRRFAATVDVDGEHLNVAYTDSDDLAMFVLSHPGASIVSPQEAVDAFNRRLNAATQFV PADESTGGDSSTVTAMEINRNSADDDAEECKGRPKKNSAFQTGSEVDRRLRLMLFLSAHL GEEYSLEELAERFIGKPKSDDELKKFVNVIHKDINTLTTVSDDGEMAGSQFFDIDWSLLD AEGIVSATNSLGLERLAGISQQYLSMLTASVSYLAHSSLLPDKLREQAESLYSRLRQHVE PGDMPWLSLTGYEMEPRNFSIVKSAISKSLLLDMEYTDGAGRTQRKLVAPDKIFVDEGVF YVAVWTDVAAAAPADKAKYVKKDTTINKATGKPRIWQVLRISRIEKAELVEPTAKIDIPD VPASELRKWSFDNGTPAVFVTNQDDLSFIDGLSGATVEKCGEGEKVHLIVSSDSWYVAFC ISHARHITAVAPETLRTMIVARAQHELSIGDRENEG >gi|222441570|gb|ABXX02000003.1| GENE 309 327553 - 327897 257 114 aa, chain - ## HITS:1 COG:no KEGG:BAD_0816 NR:ns ## KEGG: BAD_0816 # Name: ugpA # Def: UTP-glucose-1-phosphate uridylyltransferase # Organism: B.adolescentis # Pathway: Pentose and glucuronate interconversions [PATH:bad00040]; Galactose metabolism [PATH:bad00052]; Starch and sucrose metabolism [PATH:bad00500]; Amino sugar and nucleotide sugar metabolism [PATH:bad00520]; Metabolic pathways [PATH:bad01100]; Biosynthesis of secondary metabolites [PATH:bad01110] # 1 114 363 476 476 227 92.0 1e-58 MRFLPVKTTDDLFIMRSDRFHLTDQYEMEDGNYVFPDVHLDARYYKNIHDFDTRFPYGVP SLAAANSVDIDGDWTFGRDVILFGDARLTDTSEPSYVPNGEYVGPQGVEPDDWV >gi|222441570|gb|ABXX02000003.1| GENE 310 327902 - 328933 1036 343 aa, chain - ## HITS:1 COG:ECU03g0280 KEGG:ns NR:ns ## COG: ECU03g0280 COG4284 # Protein_GI_number: 19172988 # Func_class: G Carbohydrate transport and metabolism # Function: UDP-glucose pyrophosphorylase # Organism: Encephalitozoon_cuniculi # 8 335 57 362 492 184 35.0 2e-46 MTDMAIAQFKRLYEVWRSEEASTWIREDDVEPLVGVPSFHDVYETINHDKAVDAFAKTAF LKLNGGLGTSMGLDCAKSLLPVRRHKARQMRFIDIIIGQVLTARTRLGVELPLTLMNSFR TSNDTMKVLRANKKFHQEDIPLEIVQHQEPKIGAETGLPVSFPANPELEWCPPGHGDLFS TIWESGLLDVLEEKGFKYLFISNSDNLGARPSRTLAQHFENTGAPFMIEVAKRTPADRKG GHIVRDKATGRLMLREMSQVHPDDKDDAQNIEKHPYFNTNSIWVRIDALKAKLSAYDGVL PLPVIRNNKTVDPTDPTSEPVIQLETAMGAAVTLFDGGYLRMR >gi|222441570|gb|ABXX02000003.1| GENE 311 328679 - 329161 160 160 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MATHWQQGLGAIQAHGRAEATIKFEERGFGKSIDGFVMVDGLVDIMEARHSHQRLNIILT DPCACFLTAPNLVQSFELRNGHIGHPVVPHLCGGMFKCVLSQCLSLSCGRPVLIVPRQYY DKIPMTGAFGGKKGKFLTKMTSQELFYHVSRIVRHDEFEK >gi|222441570|gb|ABXX02000003.1| GENE 312 329371 - 329775 274 134 aa, chain + ## HITS:1 COG:no KEGG:BDP_1164 NR:ns ## KEGG: BDP_1164 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 2 134 8 141 141 154 70.0 2e-36 MDAQPQFDDVDGFAHVFDSSELEDEWKIRLSRELGVAARERAKHDGITLTELTRKALECD DLNETTDTVRPGRRPKNTDGREQLGDEWKIKLPYAIGKMARERASEEGISLSSLARRAIS GYLRQRDTEEQPLF >gi|222441570|gb|ABXX02000003.1| GENE 313 329879 - 332008 1798 709 aa, chain - ## HITS:1 COG:MT1753 KEGG:ns NR:ns ## COG: MT1753 COG1160 # Protein_GI_number: 15841173 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium tuberculosis CDC1551 # 267 709 23 461 463 464 57.0 1e-130 MIRVAIDGPAGVGKSSTSKALAKYYGFAYLDTGAMYRACAWWCMNKGIDLDAETIDEQLV TETVGEFFTEGHFDISVDPDDSKVYADGEDISDVIRSSEVSSHVSKVSNIIPVRHVLIAA QRAYIAREAASDSFSEGAGVVAEGRDITTVVAPDAEVRVLLTAREEVRQARRSGQSTDGV GSENVAARDAADSKVTNFTSAAEGVLTVDNSDLNFGETLDVLVRIVDDAIEEQQYRQYAS NLDDYELDEGDEGLIDGSSFVGGERRSGPKPVGVLAVVGRPNVGKSTLVNRILGRRAAVV EDTPGVTRDRVSYDAEWAGTDFKLVDTGGWEADVEGIESAIASQAQIAVQLADAVVLVVD GQVGLTNTDERIVKMLRASGKPVTLAVNKVDDRESEYLTAEFWKMGLGEPYGISAMHGRG IGELLDAALDSLKKAEKTSGFLTPSHLRRVALVGRPNVGKSSLLNQLAHEERTVVNDLAG TTRDPVDEVVTVDGEDWLFIDTAGIKRRLHKLSGAEYFSSLRTQAAIERSELALVLFDAS QPISDQDLKVMSQAVDAGRCIVLVFNKWDLMDDFDRQRMERLWKTEFDRVTWAQRVNLSA KTGWHTNRLARAMRGALESWDKRIPTGKLNAFLGKIQAAHPHPLRGGKQPRILFATQAST RPPRFVIFATGFLEHGYRRYIERCLREEFGFEGSPIQISVNIREKKKRK >gi|222441570|gb|ABXX02000003.1| GENE 314 332005 - 332778 829 257 aa, chain - ## HITS:1 COG:MT1751.1 KEGG:ns NR:ns ## COG: MT1751.1 COG1187 # Protein_GI_number: 15841171 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Mycobacterium tuberculosis CDC1551 # 8 257 3 254 254 230 50.0 2e-60 MPNAYSRAAKAHTHDNEGIRLQKLLAQAGFGSRRKCEEIITEGRVEIDGELVTELGTRVD PKHQEVRVDGSRVRVNPNHVTLALNKPKRVLSAMEDPKGRYTLSDIVGDKYDRIFHMGRL DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATLEGRISGQVCRRLVTTGVQLDDGWIK LDRCAILDASRDSTLVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGDLKSGSY RVLSQTEVRSLSKAVGL >gi|222441570|gb|ABXX02000003.1| GENE 315 332889 - 333827 963 312 aa, chain + ## HITS:1 COG:PA4034 KEGG:ns NR:ns ## COG: PA4034 COG0580 # Protein_GI_number: 15599229 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Pseudomonas aeruginosa # 23 258 5 225 229 80 28.0 4e-15 MTAVEATPITKEEQSKPLTLRVGAELVGSFIICFAIYAICSLGSAVYGINMAFIALLTGI VYAAVTVIFGSISGAQFNPAVSVAAMLTGKTHVLDGILYIIAQVLGGIGAGAAIRFLLPT SEQVTFKIWMTPTVNGFDKNSVSYSTLGNYGVTLGITLAIAVEVVAGIIIVASALRTTDG HGESKTNHAVAMGLAYGIGTAITYPVTGAALNPARATGIAIFAQNQGLNEEPLQQLWVFW ICPVLAAAVVALVVIVAGMIGTKKNVPDTVETIDKVEGNTVLGEASVADGNDGEQDEQSY AQANADESVESN >gi|222441570|gb|ABXX02000003.1| GENE 316 333744 - 334025 292 93 aa, chain - ## HITS:1 COG:no KEGG:BLD_0460 NR:ns ## KEGG: BLD_0460 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 2 84 3 85 100 110 71.0 2e-23 MSHPYVSEDHEGKPWFEWIVAAVVIVATVLAVAGYTKAATAAIAVTAIATGLVRLALRER SPWKVRSVAFDAFIGIGLGVGLFILLTIVPVGN >gi|222441570|gb|ABXX02000003.1| GENE 317 334147 - 335775 1747 542 aa, chain - ## HITS:1 COG:MT0984 KEGG:ns NR:ns ## COG: MT0984 COG0138 # Protein_GI_number: 15840381 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Mycobacterium tuberculosis CDC1551 # 6 542 8 523 523 575 58.0 1e-164 MTTTNRPIRRALVSVFHKEGIEVLAEAFIKAGTEVVSTGSTAKRLAELGVKVTEVSEVTG FPECLDGRVKTLDPHIHAGILADMTNEDHAAQLEKFGIKPFDLVVVNLYPFADTVRSGAD EAATIEKIDIGGPSMVRGAAKNSATVAIITDPNDYALVAARIENGEGFSLKERRWLAGKA FAHTAAYDATINEWTAKHWPKPLTVEQPTAEDEPEVNETKFPAAFTRTWDRAHVLRYGEN PHQQAALYLDPLNQDGFAHAEQLGGKPMSYNNYVDADAAWRAVWDFAPQIAVAVVKHNNP CGLAVGATVAEAHKKAHACDPMSAYGGVIAANSKVTMEMAESVRPIFTEVIVAPDYDADA LELLQTKKKNLRILKVSEPPKSKTQFRQIDGGLLVQSTDLIDAPGDDPNAWKLVSGEPAD EQTVKDLVFAWRAIRCVKSNAILIAHDQATVGIGMGQVNRVDSANLSVERANTLADGANR TKGAVAASDAFFPFADGAEILINAGVKAIVQPGGSIRDEEVFEAARKAGVTMYVTGTRHF FH >gi|222441570|gb|ABXX02000003.1| GENE 318 335723 - 337108 589 461 aa, chain - ## HITS:1 COG:no KEGG:BAD_0810 NR:ns ## KEGG: BAD_0810 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 461 1 461 461 592 69.0 1e-167 MANLKYWLKGLAVAALSMVVYAGALGCYIALMLLVISMEEGGDNLSAFSVSLTEAVVLLS QGNGFKTGSITLTIMPLLLTVLLIALIASLAKRVGTSLSGCVAGTIGWVLINVFFANSLD IKLVDTTGVVAVKTAIVFVLGYAIAAIPESPLTKRDLDWISEHVSSPVRKTVTIGVALGV LLITVYLVIGLIVVLYWAFSNQSAMVKLYELSGMQNGSRILTTIAMIAWIPNIAIWAISW VFGAGFSIGDLAEFTMWSGQGSALPSLPIFGLLPQAIETNWIRIALMCVPLALACAAGMV VMLFNKGFHIRVGNSDQQIDVKRVVLGFAYPAGAFCISCTVVSVCSSLLFAISSGALGSK HLAHIGVDVISSTRKIGQPTAVGLFSSWLLTLVAVSMFFGIRWIVKRVRESRSGASTAAL ESDNREVANAARTVTSTINNKEDQGDNNESTDTASSGIGLP >gi|222441570|gb|ABXX02000003.1| GENE 319 337145 - 338032 1073 295 aa, chain - ## HITS:1 COG:ML0156 KEGG:ns NR:ns ## COG: ML0156 COG0074 # Protein_GI_number: 15826979 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium leprae # 1 291 1 286 300 298 60.0 9e-81 MTLFIEDGAPVIVQGMTGHQGMTHTARMLKAGTNIVGGVNARKAGQEVNFPAAKDGEDVT LRVFGNCAEAVEVTGAQASVVFVPPRFAKDAVVEAIEAGIKLIVVITEGIPVADSAYFVE LALRKDVRIVGPNCPGLLTLPSTEGVNGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMGE LSDIGFTACLGAGGDPIVGTTLQEALEAFENDDATKAVVMIGEIGGSAEQDAAKWASEHM TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGADR >gi|222441570|gb|ABXX02000003.1| GENE 320 338034 - 339227 1253 397 aa, chain - ## HITS:1 COG:ML0155 KEGG:ns NR:ns ## COG: ML0155 COG0045 # Protein_GI_number: 15826978 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Mycobacterium leprae # 1 390 1 391 393 330 46.0 4e-90 MDLYEYQARELLEEQGIPTPKAVFAQNSHEVAEAAEQIGYPNVIKAQVKIGHRGQAGGVK LAKNRDEAILASEDILPMTIHKHKVSGVLVAEAKNILHEYYVSISVDRSSRDFDVLATAN GGTEVEEIAKEHPESVKRLHIDALEDFDIEAATKMAESIGFYHADVNQAAQILLKMWQCF KENDATLVEINPLAKIGDPDDESSKTLCALDAKISLDDNAAFRHDGWKRFADPVHVDPFE QKAREHGLHYVHLQGSVGVIGNGAGLVMSSLDAVSGAGEDQGTNVKPANFLDIGGGASAE VMCGSLEIVLSDPQVESVLINVYGGITSCEQVAKGILEALDKLGSSKPLVVRFDGNAAAE GLHILAQADRVNLHVAQTMEEAAQQAARLAANGKEVR >gi|222441570|gb|ABXX02000003.1| GENE 321 339278 - 339859 480 193 aa, chain - ## HITS:1 COG:SPAC23A1.03 KEGG:ns NR:ns ## COG: SPAC23A1.03 COG0503 # Protein_GI_number: 19115345 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Schizosaccharomyces pombe # 14 190 1 176 188 150 45.0 2e-36 MASSDITVSGLSKIGNENAEYLVSKIRTIPGFPKEGILFRDFMPVLADARAFGLLLDALE AALPVAADEFDIIAGLEARGFLFGPALAARLGKGFIAVRKAGKLPPETVSESYDLEYGQA TVEIETNIVHEGSRVLVVDDLIATGGTARAAASLIEKCGGTVAGFSFVMELVGIGGMASL GDCPTSSLITMPA >gi|222441570|gb|ABXX02000003.1| GENE 322 339976 - 340368 541 130 aa, chain - ## HITS:1 COG:no KEGG:BAD_0806 NR:ns ## KEGG: BAD_0806 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: Protein export [PATH:bad03060]; Bacterial secretion system [PATH:bad03070] # 1 129 4 136 137 175 74.0 5e-43 MFLIVIIVVMFGMMFWQSKKAKQQQAERQDFRANLQPGTEVITIGGVIGKVVSVDTEYEE IVIDSEGSQIRFGFNAISREYVRPAYVHDDEVDENGNPLSTDSTDEDQAAQEPIEGEIEA AQTETEQKNS >gi|222441570|gb|ABXX02000003.1| GENE 323 340434 - 341507 1110 357 aa, chain - ## HITS:1 COG:MT2669 KEGG:ns NR:ns ## COG: MT2669 COG2255 # Protein_GI_number: 15842132 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 345 3 332 344 370 60.0 1e-102 MTNDVAFEQSNTGANEESLRMVSASPVGNEPVSDEELRPHVLDGFIGQPRLKAQLQLFLD AARKRDVPPDHILLAGPPGLGKTTLAMIVANELGVPIRVTSGPAIQHAGDLASILSSLDA GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM LPSPLRARFGFTAHLDFYPHEELEKLIERSSSVLGISLEEGAAHQLAMRSRGTPRIANRL LRRVRDWAIVHDLETVHPDDVKEALALYQIDTEGLDRLDIAVLKAIVTNFNGGPVGLNNL SAMVGEESETVETVCEPYLVREGFLVRTPKGRVATRKAWDHLGLTSDESQVDVSKLA >gi|222441570|gb|ABXX02000003.1| GENE 324 341519 - 342136 557 205 aa, chain - ## HITS:1 COG:SA1468 KEGG:ns NR:ns ## COG: SA1468 COG0632 # Protein_GI_number: 15927222 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Staphylococcus aureus N315 # 1 199 1 200 200 108 32.0 1e-23 MIGMLHGQVDFIDAASAIIEVGGVGYETRMPSADLASMHAGQTVKVYTSLNVSQDAITLY GFSSLASKRMFLQLQKVSGIGPKVALSLLSTLPPERLAKAVADGDATALAKAPGLGKKGA QKIILELKGSIDLSQIEGASKEVRSAEDAGSEQVVEGLMSLGWRQQDALHAVQTVCESNH INVPLRDDDVPRVLKLALASLDRGR >gi|222441570|gb|ABXX02000003.1| GENE 325 342181 - 342765 481 194 aa, chain - ## HITS:1 COG:MT2671 KEGG:ns NR:ns ## COG: MT2671 COG0817 # Protein_GI_number: 15842134 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 186 3 188 188 136 49.0 3e-32 MIIILGVDPGLTRCGVGVIEAGAYRRLSFIHVDVVRSDPKMSQDLRLLAIYNGLVEKIER FAPDTVSIERVFAQENRNTVLGTAQAAGLAMLAAAQRGIPVALHTPTESKMAITGNGKAE KIQMERMVARILGLNTLPKPADAADALAIAICHALRPAGALQGGEREQHLTDAQRQWALA SQKAARQRGVRRGM >gi|222441570|gb|ABXX02000003.1| GENE 326 342772 - 343527 890 251 aa, chain - ## HITS:1 COG:MT2678 KEGG:ns NR:ns ## COG: MT2678 COG0217 # Protein_GI_number: 15842143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 251 1 251 251 289 60.0 4e-78 MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARMGGGDPDGNPSLYDAIYKAKKAS MPADNIKRAVKRGSGEEAGGANYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTK GNGSLATSGSVSFNFERKGQIIVPAEGVDFDDLFEKAAEAGAEDVTDDGDVFTVVTGPSE MIDVRKALQDAGFDYDSADLVMMPKNEVELTLEDAQKVSKLIDNLDDLDDVQNIYSNWTA SDEVMAQLDEE >gi|222441570|gb|ABXX02000003.1| GENE 327 343643 - 344305 606 220 aa, chain - ## HITS:1 COG:ML0454 KEGG:ns NR:ns ## COG: ML0454 COG0558 # Protein_GI_number: 15827145 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium leprae # 6 204 9 196 239 115 39.0 5e-26 MLEHLRAPFKRLIEPFAKALVSLGLTANAVTVIGAIGTIVVAFATGITGWLFAGAVVLTL LVLADSLDGSIAALTTGGTQFGAFLDSTLDRIADWALLAGVVIFFILHADWWYDINRSSP DCISWIGIAAAMVSMMTSFVTSYARARAESVGFEVKNGIATRADRLVIILVGMAITGLTH QGLWLAIAMVLLAVLGLITVFQRILEARCQMAVGHKTYQL >gi|222441570|gb|ABXX02000003.1| GENE 328 344414 - 346564 2729 716 aa, chain - ## HITS:1 COG:Cgl1631 KEGG:ns NR:ns ## COG: Cgl1631 COG0441 # Protein_GI_number: 19552881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 79 713 47 684 686 820 63.0 0 MLFTLSACRCLHSTLSCSSLTYSPGLHISTADPDSKGQLMAEQTISITLNGEAKEVAADQ TGVQLFAEDKNIIAVRLNGEPRDLYTELHDGDVVEPIALDSEDGLAIMRHSATHVMAQAV QEIRPDAKLGVGPVIKDGFYYDFDVETPFTPDDLKEIEKRMQRIIKSSQSFRRRVVTEEE ALAEESDQPYKIELIKDKEAHLDPEAATEISGKELSFYDNVDRDGNVVWKDLCRGPHLPN TRYIKAFKIERSAAAYWRGSEANPMLQRIYGAAFATKEDLKAYQTRLEEAAKRDHRKLGA EMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYSREMHRKHHYSFVQTPHITKGGLYETSG HLHWYKDGMYPAMRLDEEKDENGNVVKQGFDYYLKPMNCPMHNLIFKSRQRSYRELPLRL FEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMKDELKNLLTFVLGLLKDFGLDD FYLELSTKDPHKYVGSDEIWEEATNTLAEVAKESGLELVDDPCGAAFYGPKISVQARDAI GRTWQVSTIQLDFNLPERFGLEYIAADGTHQRPVMIHRALFGSIERFFAVLLEHYAGAFP AWLAPVQVLGVPVADEFAPHLQQFIASLEEETVRCEIDMSDDRFGKKIRNASKSKVPFIL IVGEEDMNNNAVSFRFRDGSQLNGVPVDEAKAQIMTVLKKRVQVNNVDDFKAAIAD >gi|222441570|gb|ABXX02000003.1| GENE 329 346604 - 347431 608 275 aa, chain - ## HITS:1 COG:MT1873 KEGG:ns NR:ns ## COG: MT1873 COG3879 # Protein_GI_number: 15841295 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 42 275 55 292 292 92 28.0 8e-19 MSRRNDANKDVLSKIHEQIVKDQNNDSTQTGSFPVVRRKPKRVSLNAKATRARLYSSVLV TVLCALLGFSYAIQLNNTTSTYETMSEDELTKLISETSTQVQKLEQRKSELSNQLDSLKD TADKNEKAAEIARQNAESNGILSGRLPVSGEGVVIRISKGSKRDIDASILFTLLEELRNS GAEVIEINDIRVITSTYISDTADGLDCDGTNIKAPFIIRAIGDSDNLQNAVNLAGGVGSR LKVKYGATVSIVPSDKVEITSTRSAPQYTYAHVVE >gi|222441570|gb|ABXX02000003.1| GENE 330 347438 - 347770 375 110 aa, chain - ## HITS:1 COG:MT1872 KEGG:ns NR:ns ## COG: MT1872 COG3856 # Protein_GI_number: 15841294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein (small basic protein) # Organism: Mycobacterium tuberculosis CDC1551 # 1 108 12 119 121 92 54.0 3e-19 MAAVLGLIIGVVIGVFVRPDIPIALQPYLPIMVLAALDALLGAARAYFQRSFSDKVFVIS FFSNVITATLLVFLGNQLGVGSQLQTAVIVVLGIRIFTNVSSIRRFIFKG >gi|222441570|gb|ABXX02000003.1| GENE 331 347770 - 348741 543 323 aa, chain - ## HITS:1 COG:Rv1823 KEGG:ns NR:ns ## COG: Rv1823 COG3879 # Protein_GI_number: 15608960 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis H37Rv # 177 322 161 305 307 82 36.0 8e-16 MMHDAPERASFPVSPENTPTKRRAVFSASFAGLTSHHVQPDIVTSTSRRRRNLDDDSLRL IDDLTNRPMDVMYTDSRLATKTPSLFSVWFTRVLVFLICIAVGTAGSVFVRQLSTDPRKE VRKQLSSQLSDQTKNVETLTKDVNALRARVEEESKSVSNWSLNQTIQDDEMVNGVLPVQG EGITLTIANPISVSGDNADSSLPRENGSQVRVVTDSDLQVLVSLLWQSGAEAIAINGYRL GVQTSIRTAGTTILIGVNSVQSPYRIEAIGNSSALANAVSKKTQKRLYDDFKEAGIYPQV SRSKSITLEAAVTGEVTYARKVK >gi|222441570|gb|ABXX02000003.1| GENE 332 348747 - 349349 616 200 aa, chain - ## HITS:1 COG:MT1870 KEGG:ns NR:ns ## COG: MT1870 COG0558 # Protein_GI_number: 15841292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 19 190 11 182 209 102 36.0 6e-22 MSKLIIKKQYSPEPRDIYFTVPNLISLLRIISIPFISVLVSRHEMVLALIVLALSAVSDG LDGLIARSFNQVSKIGQILDPIADRLLIFCSILALGVAGIIPWWMLIVVGLRDLIMAILV LVLAQRDYGPLPVHFVGKAGTAMLMIAIVALIFADIWSNSATDTLHLCGLATGIWGVGLY WLAGYIYIRQGIQLLKNDKD >gi|222441570|gb|ABXX02000003.1| GENE 333 349363 - 350214 798 283 aa, chain - ## HITS:1 COG:MT2181 KEGG:ns NR:ns ## COG: MT2181 COG0040 # Protein_GI_number: 15841613 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 282 1 283 284 266 50.0 4e-71 MLRIAVPNKGMLSEPAWNMLAEAGYRLRSNPRQLVVEDPDNDVELFYLRPLDIAVYVGRG TIDVGITGHDLLLNSGTDAKEHMELGFGASTFRFAAPNDSPISKLEDIEGKRVATSFDKL VHDYLAEHGINAETVHLDGAVESSVQLGVADLIADVVSTGTTLRNAGLRIFAEPLLHSEA VLIRSPRLAEDDDRLTILSRRLQGVLTAQRYVLMDYDIPVEKVSAAVDITPGFESPTVSP LHDKQWAAVRVVVPKAKVNQLMDQLYEVGARGIIVTALQASRM >gi|222441570|gb|ABXX02000003.1| GENE 334 350260 - 350523 483 87 aa, chain - ## HITS:1 COG:MT2182 KEGG:ns NR:ns ## COG: MT2182 COG0140 # Protein_GI_number: 15841614 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 1 87 7 93 93 92 55.0 2e-19 MKTFESLFAELSEKAAAKQAGSLTVDELGKGTHFIGKKIVEEAGETWIAAEYEGADRTAE EMSQLIYHLQVMMIDRGITLEDIYKNL >gi|222441570|gb|ABXX02000003.1| GENE 335 350556 - 350936 497 126 aa, chain - ## HITS:1 COG:Cgl1560 KEGG:ns NR:ns ## COG: Cgl1560 COG0036 # Protein_GI_number: 19552810 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Corynebacterium glutamicum # 1 121 99 219 219 125 51.0 2e-29 MRLARQLREMGCKACFAVRPAEPVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVR RLRDEITRRGLATKIQVDGGVSPKTAHIVAEAGADVLVAGSAVYGAEDPAEAIDSIREKA EAAFKA >gi|222441570|gb|ABXX02000003.1| GENE 336 350779 - 351222 150 147 aa, chain - ## HITS:1 COG:Rv1408 KEGG:ns NR:ns ## COG: Rv1408 COG0036 # Protein_GI_number: 15608546 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Mycobacterium tuberculosis H37Rv # 5 88 13 96 232 111 60.0 4e-25 MTIQIAPSILSADFCNLERDLKAISNADLVHVDVMDHHFVPNLTLGEPIVARICEVTDLP VDVHLMIEDPDRWAPEYAKLGAASVSFHMGGNPRSGASGAPAARDGLQGLLRGASGRTCR ADFRYSRRIRHDSYHDRRARLRWPEVP >gi|222441570|gb|ABXX02000003.1| GENE 337 351257 - 352270 1086 337 aa, chain - ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 1 279 1 276 316 246 45.0 7e-65 MTLAYIPSPTISQFSIGPVTIHIYALCILMGIVLAVWITTTRWKKLGGNFDQVLDITLVS VPAGIIGARLYHIITTPERFFGPDGDWAEMFRIWNGGLGIWGGVLFGALAAWAWCRHKHY PMALLADAIAPGLLVAQAVGRLGNWFNQELYGAPTTLPWGLKLNMEGTAIGHSEQCYDGA TCPSGTLFHPTFLYEMIWNLIGAAIIVYIGSKAMKKLKAGSLFAVYIMWYTLGRTWIESL RIDYAHEFLGVRINVWVSMAVFVLGAVSFIVVQQMGKDTDLLAEKLRTVTEIEQRLENGE SEDSSDSVVSFPEQTVDEIKTNDAETVSNTDKQPGIK >gi|222441570|gb|ABXX02000003.1| GENE 338 352335 - 353216 369 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 24 289 5 263 263 146 35 1e-33 MTNATVTTPSGQPLGISHKPSPTEAMFDEFKAANKPAFIGYLPYGFPDSDYSLKAFRTMV EHGVDAVEIGLPYSDPVMDGPVIQAASQIAIDNGEKIANVFKAVETVANAGGVPLVMSYW NLIYHYGVERFARNFENAGGAGLITPDLIPDEAGEWIEASDRHGLDRIFLVSPDSTDSRL KVVAGNARGFVYAAARMGVTGERSTIDASPEELVARTRNAGAKNVCVGIGVSTAEQGARV GSYADGVIVGSALVHTMLDESGKNAVDEATGLKALAAKAEELADGVHNARVAK >gi|222441570|gb|ABXX02000003.1| GENE 339 353234 - 355327 1854 697 aa, chain - ## HITS:1 COG:MT1647 KEGG:ns NR:ns ## COG: MT1647 COG0133 # Protein_GI_number: 15841065 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Mycobacterium tuberculosis CDC1551 # 266 679 18 422 422 476 60.0 1e-134 MSVLDELVAGAVEDQRAREQNISLDEVKRQTFEAPAPIDARQWLKKADGIPVIAEIKRAS PSKGHLSDIPDPAALAREYEKGGASAISVLTEGRRFLGSLDDFDKVRAAVKIPVLRKDFI VTEYQIWEARAHGADLVLLIVAALDDDKLKSLLELAHSLNMTVLVETHTREEIQRAINAG ARVIGINARNLKDLKVDVNKYNELAADLPDDVIRVAESGVFGSVELEDYARAGADAVLVG EGVATASNHEQAVERLVKAGARVKASEQTPLASHEGPYFGQFGGRYVPEALITALDELER VYEEAKADPEFHKELARLNQQYVGRPSPLTDAPRFAERLREKTGLDARVFLKREDLNHTG AHKINNALGQALLVKRMGKTRVIAETGAGQHGVATATVCAMLGLKCRIYMGQIDARRQAL NVARMRMLGAEVVEVTLGDHILKDAINEALRDWVTNVKDTHYLLGTVAGPHPFPAMVRDF QKIIGEEAKQQLQDWYGIDHPDAVCACVGGGSNAIGIMNAFLDDERVNLYGYEAGGNGPE SGRHAIRFAPGTGELGMFQGAKSYLLENSEGQTLDTYSISAGLDYASVGPEHAWLKEIGR VNYSWATDEEAMSAFKDLCETEGIIPAIESSHAVAGAYKAAEDLKAKGYEHPVMIINISG RGDKDMNTAGKWFGYLTDEQAKALEANGAQGNNADGE >gi|222441570|gb|ABXX02000003.1| GENE 340 355373 - 356929 1338 518 aa, chain - ## HITS:1 COG:ML1269 KEGG:ns NR:ns ## COG: ML1269 COG0147 # Protein_GI_number: 15827651 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Mycobacterium leprae # 13 518 6 506 529 429 47.0 1e-120 MSECSVQALKWGATWPSREQFHELADQGYRVIPIVRRLLADSLTPVGFYERLAAGRSGTF ILESAEFGGTWNRYSFIGVNSMAQLRSNNGKADWLGQVPAGVPTEGDVMEVAHAALKTLK APHVEGLPNLTSGLVGTVGWDAIRHWEPTLRAEAPNETGQPETVLALATDIAVVDHVSGS VWMIANAVNVDDRSTRADAAYDEAVARLDDMQRKAATPVEGEARINVLDETISQPELRFR TEKSDYERSVEIAKQHIIDGDVFQVVISQRLDIDSPADPFDVYRVLRTLNPSPYMYFMSL TDAQGRDFNVIGSSPETLIKVDNGHAMTFPIAGSRPRGTTIEEDEQLAKDLLADPKERSE HIMLVDLSRNDLSRVCLPESVEVVSLMDIKRFSHITHICSTVTGRVNPDMTSFDVFTSAF PAGTLSGAPKPRAIEIIDELEPADRGIYGGTVGYFDFSGNLDMAIAIRTAFIRDHEASVQ AGAGIVLDSVPASEWQETRNKAEASVEAVQIASQLRQL >gi|222441570|gb|ABXX02000003.1| GENE 341 356926 - 357333 378 135 aa, chain - ## HITS:1 COG:MT1641.1 KEGG:ns NR:ns ## COG: MT1641.1 COG0139 # Protein_GI_number: 15841059 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 12 115 3 106 115 134 62.0 6e-32 MTNEAYDNSTILDPRIAERLKRDDKGLVAAVIQQFDTKEVLMVGYMNDEAIRRTLMTGRV TFWSRSRQEYWRKGDTSGHAQYVKSFALDCDGDAILVEVDQVGAACHTGKRSCFEEGGQL PVVVGYRTKEQEGQR >gi|222441570|gb|ABXX02000003.1| GENE 342 357402 - 358172 818 256 aa, chain - ## HITS:1 COG:Cgl2041 KEGG:ns NR:ns ## COG: Cgl2041 COG0107 # Protein_GI_number: 19553291 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Corynebacterium glutamicum # 1 256 1 257 258 311 69.0 6e-85 MSLAVRVIPCLDVDAGRVVKGVHFENLRDAGDPVELAAEYYRQGADELTFLDVTASSSHR QTMVDVVSRTAEQIFIPLTVGGGVRAPEDVDSLLRCGADKVGVNTAAINDPTLIGRVAER FGNQVLVLSVDARREQGERHTQSGFEVTTMGGRKSTGIDAIWWVKRAQELGAGEILLNSM DADGTQQGFDLEMIKAVRKEVKIPIIASGGAGKAADFPPAIEAGADAVLAASIFHYGKVT IGEVKDAIKAAGYTVR >gi|222441570|gb|ABXX02000003.1| GENE 343 358171 - 358308 66 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFYSFAHNHVCNECKSNRFTLRMFVGSPSSGQNKHLSLKSNLVP >gi|222441570|gb|ABXX02000003.1| GENE 344 358292 - 359473 955 393 aa, chain - ## HITS:1 COG:Cgl1973 KEGG:ns NR:ns ## COG: Cgl1973 COG0820 # Protein_GI_number: 19553223 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Corynebacterium glutamicum # 35 391 13 364 366 391 55.0 1e-108 MSDSVNSTKDLPETGITPGGTTGAFRDVLSKDHARRGKPPLHFADMTEDERIAKAKDLGL PKFRVKQLANHYYGHFDVAAEEFSDFPAAKRAEAAEAFFPTLITEVTRQVADEGTTIKTL WRLFDGSLIESVLMRYPTRTTLCISSQVGCGMGCPFCATGQLGLTRNMSAGEILEQVRVA AKAMHDGEVAGGLGRLSNIVFMGMGEPMGNYKSVLSAVRQISAMPPEGFGISARNITVST VGVVPGIKKLTAEGIPVRLAVSLHAPSDELRDELVPMNKRFNTTQVLDAAHDYYLASKRR VSIEYALMRGINDQAEHAKLLAKRLNHYGDNWAHVNPIPLNPIEGSKWTASKPEDEQQFL DILHKAGITATLRDTRGQDIDGACGQLAAKEQD >gi|222441570|gb|ABXX02000003.1| GENE 345 359491 - 360477 839 328 aa, chain - ## HITS:1 COG:Cgl1975 KEGG:ns NR:ns ## COG: Cgl1975 COG0575 # Protein_GI_number: 19553225 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Corynebacterium glutamicum # 23 323 9 276 285 123 31.0 4e-28 MEHQEQLEKETEEAINAINKKTGRNMPQAIATGAVLVILILACLLISIDLFVYLVVLFMV LALWELRVDFATAGLHIPVAVLWVCSAATLLSTYYSERHIVAMTVCVLVSLVVVAIAASA KVTFGSRISLAVADKLSHTDAGARLESSFNHEQGEVSHSRLSHVAVSMFTVLYIPLLASC LIMPLTFNDHPVAHAIMMVFMPALSDTGGLFAGAWLGKHKLSPRISPKKSWEGLAGSILF SMIGSFAVMFCTYGSDVWISRWWVPVVAGFMIGIAGTFGDLCASMLKRDIGIKDMGHLLK GHGGVMDRVDSILLCAPFVCVLLWATGM >gi|222441570|gb|ABXX02000003.1| GENE 346 360529 - 361083 885 184 aa, chain - ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 4 184 5 185 185 173 51.0 1e-43 MATIVEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPE PRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKA EDGKVAVRNIRRKAKESLDKAIKDGEMGEDEGDRLLKELDKITKQTTDELDTLLEAKQKE IMEV >gi|222441570|gb|ABXX02000003.1| GENE 347 361134 - 361883 850 249 aa, chain - ## HITS:1 COG:ML1591 KEGG:ns NR:ns ## COG: ML1591 COG0528 # Protein_GI_number: 15827835 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Mycobacterium leprae # 12 242 50 279 279 273 63.0 3e-73 MTGENTGDNPRRVLLKLSGEAFGGGKVGIDTSVIRRIAEEIVPAVQQGVQVAIVVGGGNF FRGAELQQAGIDRSRGDYMGMLGTVMNCLALQDFLEQEGQATRVQTAITMGQVAEPYIPL KAIRHLEKGRVVIFGAGAGMPYFSTDTVSIQRSLEIHCDEVLMGKNGVDGVYTADPRKDE NAKRFATLSYNRALVDNLAVMDASALSMARDNKQRIRVFGLEGNGNVTRALLGEEIGTMV STAESTLAE >gi|222441570|gb|ABXX02000003.1| GENE 348 361880 - 362023 86 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352150|ref|ZP_03743173.1| ## NR: gi|225352150|ref|ZP_03743173.1| hypothetical protein BIFPSEUDO_03765 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03765 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 47 1 47 47 79 100.0 7e-14 MRLAIIHRVMANFVFFSTLCRCGVVSVFADTLESGKFREFSGKKGFS >gi|222441570|gb|ABXX02000003.1| GENE 349 362069 - 362920 417 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 280 1 263 283 165 36 3e-39 MAAITAALIKQVREETGAGMMDVKKALTEAEGDVARAKEIIRAKGIQAAGKREGRKAQEG TIASQVVESANGQTGYAVELNSETDFVAKTPKFVEFADSVLEDAVKAEAASVDEVLAAAS GEATVKEAVEEAAALFGEHVKVGQFAKVEGPHVEIYAHKKSAEMPPSIVAMIATDEAGAA VAHEAALQISAMGAQWLTREDVPADVVESERRVATEKSLAEGKPEKIVPKIVEGRLNAFY KENVLLEQSYVKDPSKTVGDLFKEVGGAAVAFARVEVGKGEAE >gi|222441570|gb|ABXX02000003.1| GENE 350 362996 - 363820 1317 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154487370|ref|ZP_02028777.1| hypothetical protein BIFADO_01220 [Bifidobacterium adolescentis L2-32] # 1 272 1 272 272 511 96 1e-143 MAQINMSDMLKAGLHFGHQTRRWNPKMKQFILTQRNGIHIINLFKSLDMIDKAYDFIKAT VAHNGTVLFVGTKKQAQEAVSNQAVRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM DFTDVRGSGLTKKELLLLEREKDKLAKQLGGIRNMNRTPSAMFVVDVNKEALAVEEAHKL GIPVVAIVDTNADPESVEYPIAANDDAIRGIELLTSLMADAVAEGLLERSGKAAKAEGET EQPMAAWEKELLTEGAPAADAPAEAEAEAEAKAE >gi|222441570|gb|ABXX02000003.1| GENE 351 364082 - 364567 553 161 aa, chain - ## HITS:1 COG:MT0444 KEGG:ns NR:ns ## COG: MT0444 COG0242 # Protein_GI_number: 15839816 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 159 1 177 197 126 42.0 1e-29 MAIREIRVVPDPVLRTPCDPIKEITPAVRHLVQDLLDTVDDPGRAGLSANQIGVNLRAFS YNINGKIGYVLNPVLEETCGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLEGKTVVLEG RGIMGRMLQHETDHLNGHVYLDRLEKEERREAMRYMRNHHK >gi|222441570|gb|ABXX02000003.1| GENE 352 364570 - 366615 1741 681 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 2 599 1 596 600 439 40.0 1e-123 MLREFVPEPAYSTTDEDTVFALLSRRAKRDPDDLIAQWQDDETRRWHDVTAGEMLERVRA VAKGLLGLGVKAGSMVVIYSPTCYEWGVIDFACAAIGAVSVPVYETDSARQAASIIEEVD PIIAFAGDFAHTQTLEQIRDEHSSLRYVFNFKADGLDAVADFGEGVGEDTLDQVISRVKA DDMLTIVYTSGSTGKPKGAMLSHRNFTHIVLNGYIILDEMLYQPNRLMLFLPLAHCFARY IQYVAIGGQGVVGYLPGAKHLLADLRSFKPTYLLGVPRVFEKVYNAASQKAGAGIRGRVF AKAFDHFVQWSKDEQETGRHSIVARAEHSFFMSVVGKSIRSALGPNMRYLACGGAPLNVD LAHFFNGMDGITFIQGYGMTETAAPMIVNWQDANRVGSVGKPGPGMGVRTDDDGELQVMG PNVFLGYYKKPELTADVRMADGWLKTGDLGTIDDDGFVYITGRKKDIIITAGGKNVSPAP MEDVINTCPIVSHGVVVGDGKPFIGALIELDQEMVRSWLAQQGLDSNMPMEQIAKNDAVR AFIQQYVEKANANVSRAESVRKFEILDEEFSQEKGTLTASLKVVRPKVLKRYENVIDNVL YAPKPSNKPLPKTVQILDRTTETVKQASESMRQASESVSPKVRQAFDTMQEKIKKQTEDA GEFQTPEDSSETEETTMNEER >gi|222441570|gb|ABXX02000003.1| GENE 353 366719 - 367372 372 217 aa, chain - ## HITS:1 COG:no KEGG:BAD_0778 NR:ns ## KEGG: BAD_0778 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 216 3 216 216 172 42.0 1e-41 MDDSCENDVPPPEANEPFSEVPPSDQGSAANAKRADKSGKKREGENLTEWERISLELGRK PVFDYDKTLPSYDGFLNSDLFGRKIPFHYIQIMPGPCDAEFAYSMNMFAAQLICNVVDIF RGRQKEARVERVLSEACMRKLRNASAQIAAQMKKDVRIYAQLGLLPITVYYVDSWLVSPT CFESTVLMGIGGRRLCSNLKCVLKGSAWKCEVADFGV >gi|222441570|gb|ABXX02000003.1| GENE 354 368079 - 369152 938 357 aa, chain - ## HITS:1 COG:Cgl0918 KEGG:ns NR:ns ## COG: Cgl0918 COG0462 # Protein_GI_number: 19552168 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Corynebacterium glutamicum # 29 344 10 322 325 414 64.0 1e-115 MVNMGHVHLTRKQTFGDMVSAILEGKPDKNLILVTGRTHPKLAAEVAEQLGIDVLETTAY DFANGEMYVRYTESVRGADVFVLQSHAAPINQSIMEQLIMIDALKRASARSITAVCPLLG YSRQDKKHRGREPISCRLMFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLIAMPVLVD YIRDRFSNQLDNVAVVSPDAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVG DVEGKDCVLVDDLIDTAGTIAGACSVLKDAGAKSVTVVATHGVLSGPAVERLKNSGAREV VLTDTVPIPEEKRWDGLTVLSIAPLLASAIRAVFEDGSVAELFDTYPEHHGQGFLFA >gi|222441570|gb|ABXX02000003.1| GENE 355 369192 - 369938 657 248 aa, chain - ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 56 248 8 202 218 252 66.0 4e-67 MTGPKRMRPESAEADSELAISYVVEPERRMSDLSVESAGSAVATGRRSARGNWHSRPRIG IMGGTFDPIHNGHLVAASEVSWVYDLDEVIFVPTGRPVFKLDKNVTNAEDRYLMTVIATA SNPKFTVSRVDIDRPGVTYTIDTLRDIRAQHPDAELFFITGADAVAEIMQWKDADKMWDL AHFVAVTRPGYSSPEGVKLPEGKVDTLEIPALAISSTDVRRRAEHGEPVWYLVPDGVVQY IGKHGLYR >gi|222441570|gb|ABXX02000003.1| GENE 356 369935 - 370516 649 193 aa, chain - ## HITS:1 COG:no KEGG:BDP_1262 NR:ns ## KEGG: BDP_1262 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 12 192 14 194 194 241 81.0 1e-62 MNEHNNNDGQMEETMTDAKNPWNADLNDPYLGLKLASERLSIVRYVFLVQIEDGIASAAQ RASLEYADAVLIGWPEVDAEDVVELDEEKLKSVDEQMRLMEQYIAKFSAMEREQDIDGMT DTLIRVTERVAEVRRAYQPDFPLPTFAEIRRVVQDEWDEDMGKIDPDNASPTADSIGRET ADADQEQKNEDAS >gi|222441570|gb|ABXX02000003.1| GENE 357 370513 - 371826 1332 437 aa, chain - ## HITS:1 COG:lin1227 KEGG:ns NR:ns ## COG: lin1227 COG0014 # Protein_GI_number: 16800296 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Listeria innocua # 16 436 1 414 415 377 46.0 1e-104 MTNPQTQSNAMEPDVLNEVCAKADAARIAQAQLAQTNTQRKNELLNAIADALDARANEIA EANAIDMQKSAEHGMDAGKLDRLKFDVPRVNAAAQGVRHVATLQDPIGEIVRGYHLDNGL RLEQTRVPIGVLGMIYEARPNVTVDVASLCIKSGNAALLRGGHAAERTNAATLNIIADVL HEHGYDAALIASVDEYGRQGANAMMQAQGHIDLLIPRGGAGLIQAVVQNSKVPVIETGAG NVHIYVDRTGDQNKAIPIILNAKTQRVGVCNATEKLLVHSDIAEAFLPQIATALAAADVE VHADEQAYEIIDKTGIDGVKLIHATEEDWDTEYLALKIGVKVVDSLDEAISHINRHSTGH TESIIAEDYSAIEEFTSRIDSAVVMVNASTRFTDGGVFGFGAELGISTQKMHARGPMGLR EMTTTKWIGYGTGQVRA >gi|222441570|gb|ABXX02000003.1| GENE 358 371980 - 373287 1704 435 aa, chain - ## HITS:1 COG:Cgl0969 KEGG:ns NR:ns ## COG: Cgl0969 COG0112 # Protein_GI_number: 19552219 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Corynebacterium glutamicum # 7 432 4 429 434 605 70.0 1e-173 MTASPLAQTPNDMFNAPIAEADPEIAEVLNAELSRQQNGLEMIASENFVPRAVLQAQGSV LTNKYAEGYPGRRYYGGCEQVDKIETIARERAKSLFGAEYVNVQPHSGAQANAAVYQALV KPGDTVLGLALDHGGHLTHGMKINFSGRFYHAEAYGVNPETFRIDPEIIRQRALETHPAM IIGGWSAYPRIEDFKAMKEIADEVGAKFWVDMAHFAGLVAAGLHPSPVPYADVVSSTAHK TLGGPRSGFILAKQDYAKKLNSAVFPGQQGGPLMHVIAGKAVAFKVAASPEFKDRMQRTL DGAKILAERLMSDDVKNNGISVLTGGTDVHLVMVDLRNSEMDGQQGEDLLAQCGITINRN TVPFDPRPASVASGLRIGTSALATRGFGNKEYEEVADIIGTALAAGKDADVEALRARVDK LAEDFPLYPGLDQIH >gi|222441570|gb|ABXX02000003.1| GENE 359 373549 - 375036 2050 495 aa, chain + ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 4 488 6 490 496 444 46.0 1e-124 MTTFHSTRSTTDSLTSKQAIRKGIADDGGLFVTDSLGETHVDVASLAGKPYQQIAFDVLS VLLPDFSETELKACIDEAYGAQWSDEKITPVKPLGDDYVMELFNGPTSAFKDVALQILPR FMARTTPAGGDGNEKIMIVTATSGDTGKAALAGFADAEGTGITVFYPEGKVSQVQELQMS TQAGSNVNVCAVKGNFDDAQSAVKRIFGDRELANRLASDSHVVLSSANSINVGRLVPQVV YYFSAYAQLLEQQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVLF DFLTSGTYNRQRPFYQTISPSMDILISSNLERMLYYMSDKDTRLIAMLMNDLNQWGAYEV PEPMLAKIRSLFGTGWADEDQVREMIADCWNKNHYVIDPHTACGYYVMQQMPRDPLTPRV LLSTASPYKFPRVVNESLGLDASGTDFECMDVLAEATGTTAPAALRGLETADVRFDHVVD IDGMEGFVEQAAKAL >gi|222441570|gb|ABXX02000003.1| GENE 360 375158 - 376462 1243 434 aa, chain + ## HITS:1 COG:L157472 KEGG:ns NR:ns ## COG: L157472 COG0477 # Protein_GI_number: 15672136 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 32 427 3 380 393 127 28.0 6e-29 MTAPTIPASESVRQKQPAQQSNQPEQPRRKHDRLITRDMALVMLATFCFMSSNMLANPIV AGYAESLGADGMLMGAVAGSMSFISLFCRPIAGNLSDKTSKRTLVAVGTVLYFAAGLLYY FANSPIMLIMARVINGVGFACCSVCLATWMSLLLPIRHMGAGMGLYGTMNALAMAVGPAL GIRAQKYIGYRLTFLSSLVLAVIMLLATLMVKNGGQPVRKKQTSITENPSTAVDIDGSAS ATKKHRFSIRSILEPRVVPLSLTFMMFAIAYFANQSFIVSYVQSRHLPVSSDLFFMFYAV ALLVLRLGLRDLFDSKGFRFWLTVCSLGMLAMLACMTFLFNDWMLLLAAIFTAVGYGLMS SVTQAQAVVIAGRERSGIANSTYYAGIDLGMSVGPFVGGLVYGHLPAVWFYPVFMLAMPV AWLIYLLCVKRVSR >gi|222441570|gb|ABXX02000003.1| GENE 361 376429 - 376602 66 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDALHEPGWASVGHIAVYGKYDRPQKQLERHALGLVYGRNLAHDANNYRETRFTHNK >gi|222441570|gb|ABXX02000003.1| GENE 362 376662 - 377234 649 190 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_0705 NR:ns ## KEGG: BLLJ_0705 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 190 1 193 193 287 72.0 2e-76 MRVFDFDGTIYDGESLFDLYLFSAKYNPKVLRYIAPVLRYAIKYKLGRATFDQMEYGVGK LCHGYISELAESLEFEELVNAFWDQNMKRIKPWYKPREDDAILTASFDITVGEACRRLGV QHLVSSTIDDNTLNVNYLNFNTNKPKRFRELYGDNVRVDEFYTDSRFDQPMIDMARRAYM VKGNKIHQVK >gi|222441570|gb|ABXX02000003.1| GENE 363 377423 - 378307 583 294 aa, chain - ## HITS:1 COG:mlr2757 KEGG:ns NR:ns ## COG: mlr2757 COG3177 # Protein_GI_number: 13472455 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 19 230 27 233 263 77 28.0 4e-14 MAERIVERLIRERDTRYGDGIYTTTQIQFAWNSNHMEGSTLTAKQTAQLFATGTYTTDGS EQVNPDDALETRNHFAAFRWILDHADEPVDRDMVCHLHAILKQGTRQVSDSLFNVGGYKT RPNFIGNPVTPTRTALPQDVPEFMDRLFDMCTKLEDEPYQIARVHWTFEKIHPFSDGNGR IGRLIMFKELLRIDALPVLVHDAYRAEYVNGISKFPDEPGWLVDTLLFERDLYRSHVLKT DAEALRYTYHDQWNMAEHRVERDEDLEFAKLIDTKAQPLFNEEYQQRERLLWGE >gi|222441570|gb|ABXX02000003.1| GENE 364 378363 - 379082 592 239 aa, chain - ## HITS:1 COG:no KEGG:BDP_1738 NR:ns ## KEGG: BDP_1738 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 17 227 6 215 231 252 60.0 9e-66 MIERGVVMTDLKMFSKPVVFTDFDGVLNAFPDDKLLRRGGVNKVMTWAKPDSPYAKMYNP EKAFHLNGNEKAHTPVGSWRIHWSSELSDAMYALAVDGIVELWWLSTWQPYCSQILDPML GWDPMLVDVITWYDPVTKWGREAGKWQTIQRRVRIECEENEPAPIVWIDDDECFEQRAQL LEELQPKAPVLMVRPDYRIGISRRQWKLIDTFVHHPEQFDTVTFDMEPTCRIYDIHHGF >gi|222441570|gb|ABXX02000003.1| GENE 365 379309 - 380193 183 294 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 96 293 54 242 242 75 26 5e-12 MADESSKIPEKTVEQIFDERYPLDKWEDSNYSILDKFSMRGRKGFVTGAAGGLGRNAAAA LAQAGADVALVDLPSQEDKLTELAKDMSERFGTNVIALTCDVTNVEQVAELKTQLVEQLG TVDFAFLNAGVNVPGDDQDATEEVWTRTININLNGTYRTGRIAHEIMREHGHGGSLIFTA SLSGHNANYMMGSPTPVNAYGATKAAIMEHSRYLAAALAKDGIRSNTISPGYVWSGIFNG RIDMPGHDAMLEVVPMHRFGTNDEIASTVLFLASDASSYVTGIDIRVDGGYSVF >gi|222441570|gb|ABXX02000003.1| GENE 366 380281 - 381195 884 304 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352169|ref|ZP_03743192.1| ## NR: gi|225352169|ref|ZP_03743192.1| hypothetical protein BIFPSEUDO_03785 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03785 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 304 1 304 304 552 100.0 1e-155 MGSYTDRDGLAVITDNVWGPDGYPLDVDGNPIYFVDENGDTVSSGKDIAVYNYAGVGSDP FRTSSLIINAWSGKDGTPFDYSTGSALDTSGTGKGASDSESADMTFAEGAYDPDNLEIRQ MNLSRAGFSVMNFNARLCSKMYDQLAKLTIPGYQAMYDDPTELDKSALEAPIAAAQAKLA EFGKYTDDTVASLTEAYEQVLSLWNNTTFSSEQNGLVSNAATLLNTALDGLKLRETKPDD QPGGGEAKPNDKQPSKDKNASKADGKPTADLPRTGSDIVPIIAVMLLLAGAGTTAGTLIR RKHV >gi|222441570|gb|ABXX02000003.1| GENE 367 381304 - 381657 281 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352170|ref|ZP_03743193.1| ## NR: gi|225352170|ref|ZP_03743193.1| hypothetical protein BIFPSEUDO_03786 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03786 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 117 35 151 151 204 100.0 2e-51 MAVAAVGSVALCATMAFVAALTGYVSSSDLDSAAYKMAASQAEITESLITDSDGVRKVYN SAAIAFPDGHTDSYQKMHRAGSEETAWSLPGSTPVMFEMPEWTGSDGKPLKAGIDIC >gi|222441570|gb|ABXX02000003.1| GENE 368 381593 - 381805 116 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSAATKAMVAHNATLPTAATAMLSCRLNHMDFAVTFAAASLFSVVVRCDVDVPLFNAPCF PEISPFWKTS >gi|222441570|gb|ABXX02000003.1| GENE 369 382177 - 382362 97 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352171|ref|ZP_03743194.1| ## NR: gi|225352171|ref|ZP_03743194.1| hypothetical protein BIFPSEUDO_03787 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03787 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 61 4 64 64 117 100.0 2e-25 MTRFKPYFAQDLFPICSLDRSDAYCLEFAAARNESTNCAHAKAGMMTFILAWYRHLKSEE Q >gi|222441570|gb|ABXX02000003.1| GENE 370 382373 - 382858 644 161 aa, chain + ## HITS:1 COG:Cgl2438 KEGG:ns NR:ns ## COG: Cgl2438 COG1225 # Protein_GI_number: 19553688 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 20 157 6 143 158 168 55.0 4e-42 MSDINPSVASAAQNPPAFARLEAGLTAPDFTLPSDNGGSVTLSALRGQNIILYFYPAAMT PGCTTEACDFRDNLARLSSRGFTVLGVSKDPLDKLIRFRERDHLTFPLLSDADLTVHRLY GAYGEKKLYGKVYEGVIRSTFVIDGDGVIRVARYNVRERSC >gi|222441570|gb|ABXX02000003.1| GENE 371 382944 - 383135 89 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352174|ref|ZP_03743197.1| ## NR: gi|225352174|ref|ZP_03743197.1| hypothetical protein BIFPSEUDO_03790 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03790 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 63 52 114 114 122 100.0 1e-26 MIYCRKSESHRAFSLLLRGRAPCRYETFERLAEEPMFEDIGTLHDHYQEFDIYPLLTLLA SFA >gi|222441570|gb|ABXX02000003.1| GENE 372 383106 - 383330 207 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488621|ref|ZP_02029470.1| ## NR: gi|154488621|ref|ZP_02029470.1| hypothetical protein BIFADO_01928 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01928 [Bifidobacterium adolescentis L2-32] # 39 74 1 36 36 73 94.0 6e-12 MRLRLPTINHRLPTCQPTACVCGLLDRVGDALAEERERLELKAIEMLKGPKCLVQPEPVD HAWWDDGSGVYSIG >gi|222441570|gb|ABXX02000003.1| GENE 373 383285 - 383581 126 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGFRIEHVSEIQRHDGDAFRIGVCKTHDLARCDNRIDLLWFGYLTVGTPHHAMPSRNRP LIITTRHHGTFLSAGFTYPAYRLPQPMLYTPEPSSHQA >gi|222441570|gb|ABXX02000003.1| GENE 374 383658 - 383936 325 92 aa, chain + ## HITS:1 COG:no KEGG:BDP_1272 NR:ns ## KEGG: BDP_1272 # Name: not_defined # Def: antibiotic resistance protein # Organism: B.dentium # Pathway: not_defined # 1 88 80 167 170 147 76.0 2e-34 MAFEMATDCEVVEGRTLCNWGEAFKSIVGNGTASIIDDLDEARQGLALLMKQQAGMEHAE FTDQQVRAVTVWKVEADYLTAKVREKPQLHTH >gi|222441570|gb|ABXX02000003.1| GENE 375 384088 - 386007 1833 639 aa, chain - ## HITS:1 COG:no KEGG:BLD_1202 NR:ns ## KEGG: BLD_1202 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 22 612 7 599 622 621 60.0 1e-176 MRIMAKNHTATKEQRQAGAWRKRGTKSVGGGMLALTSAVVAAAMLATPAALAGEGTARYY SSKQPYVAPASTSYSAIPSRYHLAYTESVARHGSRGLSSYKYDALLALMAQSAAENNYAG FVSPEVGKEFINNVNAITAANVGNGYGMLSGQGAIQHQGIGERIYQRDADLFANAAKQGL RVSYQSSGEPRATESGENFKLGFDQASNGLLANAVVAPNNPADNNSGKNFDKNTTTLYFH KTDNPDGTQKTGEAKERAERYQQFVANDGGIAEAEENVTNDPSMTTASHNLLSQIFTDDF LASIGKEEGQRIWYNTADGTKKGAANCAAGADPAKDANACGDAKKKIASEQDAAMDLYNL YIIAADMEQENTGSHTFNFDQYFQGQHAQEAKTFAWSLDAEDFYEKGPGRAGQDETYRIA QPLLDDFFNAIDTRERAGTAATFRFAHAETIIPFAALLKLPGSQQQASELYTYENNPWRG ESVTPMAANVQWDVVVRDGTDVSGQPYQPLVRMLYNEKEIGFNDSCTPIADGSTWYKESE LKSCLNGKGTTVDARLTDEEGQPETPGHESTPDDSQKAPGANDANGQRKHPVKSSANGGD AVKLAKTGSNVTPAIVATVVMVSSAIFGGSYARRSRRKA >gi|222441570|gb|ABXX02000003.1| GENE 376 386180 - 386389 102 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSRCSTYHRTCWTSSTDFAADTPNQRTSLWLADCRLDTWKRPRLSRQDRKPKVCKNPDV TGCGRFLGD >gi|222441570|gb|ABXX02000003.1| GENE 377 386452 - 386619 126 55 aa, chain + ## HITS:1 COG:no KEGG:BAD_1279 NR:ns ## KEGG: BAD_1279 # Name: tnp # Def: IS3 family transposase # Organism: B.adolescentis # Pathway: not_defined # 1 55 397 451 451 98 81.0 9e-20 MKMESVHPGHWEERTRDEVLVPVDDCIRWHDHERIKRSLGWMSPVQYRQSQGMAA >gi|222441570|gb|ABXX02000003.1| GENE 378 386616 - 386861 195 81 aa, chain + ## HITS:1 COG:no KEGG:BDP_2247 NR:ns ## KEGG: BDP_2247 # Name: not_defined # Def: acetamidase/formamidase (EC:3.5.1.49) # Organism: B.dentium # Pathway: not_defined # 13 74 296 357 387 63 40.0 2e-09 MIISKKTSAAPLPFAISHGTLIPMGFSSTLDDALSQSVEHAINMIAAMFEMPRQQVYLLL SAAINFNVTQVVDITPKAFTV >gi|222441570|gb|ABXX02000003.1| GENE 379 386991 - 387152 83 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPTPIMIAIFFAPKERASVSARSVAWVVLLSCCMIVCWGNHLLFHSLIEFFG >gi|222441570|gb|ABXX02000003.1| GENE 380 387490 - 387867 428 125 aa, chain + ## HITS:1 COG:SA1748 KEGG:ns NR:ns ## COG: SA1748 COG1725 # Protein_GI_number: 15927508 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 1 125 1 125 126 94 42.0 7e-20 MKLIISSVSGEPIYEQIKNQIRSAIMSGELTAGEALPSLRKLAKELRVSVLTVTRAYNEL ADEGLVENVQGKGTFVMERGNELMKERARERIMDKLREVSIEAKAADISLLDLLGMFEKA YREQS >gi|222441570|gb|ABXX02000003.1| GENE 381 387864 - 388796 989 310 aa, chain + ## HITS:1 COG:BH0652 KEGG:ns NR:ns ## COG: BH0652 COG1131 # Protein_GI_number: 15613215 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 29 298 17 286 288 204 38.0 1e-52 MNDSSLPQGTRPTLALSVTGLTKHYDSGFTLDDVTFDLPSGYIMGLVGPNGAGKSTLIKL ILNMTARDAGRIEVLGLDAMADEERAKEQLGVVLDSSYFIEYMTVDAVERTSSPMYPLWD HNLFDAYLRRFGLGRNKKIKDLSRGMQMKLMLAVALSHDAKLLILDEPTSGLDVLSRDEL MDILSDYVADGGHSVIFSTHITADLERCADFLAYITNGMLYYSGPKDEFEDAFRLVKGGP DELTDGLQRAMVGIRTYATGFDALVRTQDIPHIGGTDGLLTQHASIEDVIRLTNAAAHTA IGNTNKGDVR >gi|222441570|gb|ABXX02000003.1| GENE 382 388793 - 389509 702 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488629|ref|ZP_02029478.1| ## NR: gi|154488629|ref|ZP_02029478.1| hypothetical protein BIFADO_01936 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFPSEUDO_03799 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFADO_01936 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFPSEUDO_03799 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 238 1 238 238 411 100.0 1e-113 MNTTANADAMTAILRQISLDWNRTISYGRSYIAIFFAYVPGFTCLMAATGSTLDSVAGAA IGGAASGFLMLNITLFSYEQMNNHHWMNGIVPINRNHQILGRFAFLIACDLVAGLEVAAS IACAGTIMHEPVKVTDAIDFAAMTVLTLVLLNAIVQPFLYRFSPYRAMAAIILSIGVIVG TVIGLRKALPEFEKTVEQLAEAISRHQAIALATFLIIDVLALVFSSKISLHIYGSKDI >gi|222441570|gb|ABXX02000003.1| GENE 383 389605 - 390264 823 219 aa, chain - ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 7 194 6 192 215 176 48.0 3e-44 MAGNQGKGAIFDLDGTLLDSMGVWDQVDIDFLSKRGIDVPDDYMTKVAAMQFRQIAEYTI ARFSLTDTPEELMDEWDHMARVMYATVVEAKPYAREYLAQLKESGAKLAVATSLPPMLRE PAMKHVGIFDYFDEVVSVDDAGDVGKDQPDVYLLAASRLGVEPGECTVFEDLLIGMRSAK SVGMKVWAMHDDSSDADWPAICGLADGVMFDFHDAPAVL >gi|222441570|gb|ABXX02000003.1| GENE 384 390297 - 392003 1705 568 aa, chain - ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 565 1 573 593 286 37.0 7e-77 MLEELEIHNLGPIRSALIAPAGGMTAITGETGAGKSMLLSAIRLISGGPSDGGRVSVGAS EAWAQGVFEVASSPAAVAAAHEAGFEPEDGELFLSRKVPASGRSRSMLSGRSVPRSVLGS IAAELVTIHGQADQLRIASSARQREFLDRYAGDDVALVAYGKAWNALRAMDERLERLSSQ ESSMRQQADYLRESIERINRIDPQPGEMAELRARRDRIENAAEIAEGVNRALSALDASQV VDDVESSSATDLIDRASQALRAIHVDGVFSELADRLDSISTDLSDVVFTLSGEVDNDLGM EDLDAINGRIHELDELVRRWGPELSDVIAWRDQAVFDLEDLDASPEKVSQLQAEREKLFG EALKAARAVSKRRAAAAKELAAKVTAELESLAMSGSKLEIRVSEREHLDASGADGIDFLF TPFPGSPQMPMGKSASGGELSRLMLALELVAAEKHVVAGGSVPPMTFIFDEVDAGVGGKT AVELGARLAKLAQSAQVIVVTHLPQVASWADEQYVVAKGEMDDGSIATTINQVRGEARVH EIARMLSGSESEASLEHAEELLKSSVLD >gi|222441570|gb|ABXX02000003.1| GENE 385 392012 - 392950 827 312 aa, chain - ## HITS:1 COG:Cgl1379 KEGG:ns NR:ns ## COG: Cgl1379 COG0061 # Protein_GI_number: 19552629 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 55 289 72 305 320 231 49.0 1e-60 MFGTRHAVVVTHSRLRESGTVVEEAVGQLTQAGFEVSIIDNIEAPDFGKQPPVVSERTEI VVVLGGDGTILRAAELVHCTSVPILGVNLGHVGFLAEFESFQMSEAIRRVAEHDYSIDER MIAHVDVWLPGASEPIEDWALNDITLERADRGKMVELSIRVDDVEMSSFGCDGVIVSTPT GSTAYAFSAGGPIMWPNVKALQLVPLAAHALFARPLIIGSGSTFAIDILEDSTSDGWICC DGRRQCALPRGTRVEVRESKSTLRLARLSGVPFTNRLVTKFDLPVVGWREQARKTGGVHH GHVFPEDKETNE >gi|222441570|gb|ABXX02000003.1| GENE 386 393219 - 394682 1581 487 aa, chain + ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 51 487 17 445 445 208 34.0 2e-53 MSNLVFDESSSNREASHGYAWWFSGDTFEKAMAEDRKPRKRGLTRRLVNHPGRLTIFYFL TLAALSTTLLMTPIATPKDETTTFTTAFFTAVSAISTCGISIVNSTTHWTTFGQGVLIFA VQMGGLGVMTFASLIALAVNHHLKATQRMLTANELGTTKLGEIKGVLTVVITTAFVIEGI TFVALFPGLYKVNHGNVRHTLWESLFFAVMAYNNAGFTPDGAGLHVNNWAVGLPILASAF CGTLGFPVLLNLMRSWRMRRPPKRWSLHTKLTLTTTFCIVIASFTWFLLMEWNNKLLFAG NGIEPRLWHAMVAAVMPRSSGFDLSWMPGVSDATKVFLSIVMFIGGGSTSTAGGIRVTTF AVTLLTCRAAFTGRHDINAFHRRIHTQAVMTAVAVSTACLMLVTVVSMALMIITGCSLCD ALFDTCSAFGLGGYSVGVASESSPTVLYILAATMFIGRLGPLTIAYAISRPHNLEAVRYP TEQIVVG >gi|222441570|gb|ABXX02000003.1| GENE 387 394770 - 395423 884 217 aa, chain + ## HITS:1 COG:BH0597 KEGG:ns NR:ns ## COG: BH0597 COG0569 # Protein_GI_number: 15613160 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Bacillus halodurans # 10 216 7 215 218 129 37.0 5e-30 MANNTRSVLVVGLGRFGSSVATTLDMMGQDVLAVDKDGELVNRWSSQIPTVQADMTDVMA LEQINASDFDTAVVAIGDSVEASVITAGNLLDAGISDIWAKSVSKEHARILQRIGARHII NAETDAGKRVGHLVSGNYLDYIELEGAYNVVKIHTPAHVVGYTIEDARVHERFGITVVGI KSPGKEFEYGSKELIMHRNDELIIMGKQNQIDRFLRS >gi|222441570|gb|ABXX02000003.1| GENE 388 395541 - 396302 721 253 aa, chain - ## HITS:1 COG:TM1576 KEGG:ns NR:ns ## COG: TM1576 COG1189 # Protein_GI_number: 15644324 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Thermotoga maritima # 11 249 6 239 267 172 45.0 5e-43 MRNSDSTQVVRLDVALLERGLTDSRSKAQRLIADGKVSVNGVTVTKASAKVGGDDVIAAD RGDGYVSRGAYKLVGAFERFADVGLRSAQGLRCLDIGASTGGFCDVLLRNDAAQVIALDV GHGQLDPKIAHDDRIIEMSGVNIRDVYAEDLPYRPEMIVSDVSFISLTYVIPVIARIAAP QAQIVLLVKPQFEVGKGNLGKNGIVESQELREQALSSVVACAERNGLDVRATTVSPIEGT HGNIEYLLYAVMQ >gi|222441570|gb|ABXX02000003.1| GENE 389 396334 - 397368 1087 344 aa, chain - ## HITS:1 COG:Cgl1376 KEGG:ns NR:ns ## COG: Cgl1376 COG0647 # Protein_GI_number: 19552626 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 16 333 7 313 328 192 40.0 9e-49 MARMLKSTNQPLSEAYSLALLDLDGVVYRGKNPVEHAAKNIRKAESLGMAVEYTTNNSSR LQAVVADQLKGFDLDVESWQVITSSVVAARMVARAVPEGSKVFVLGAQHLREEVAKQGLE VVDSAEAQPVAAIQGWYPDMSWNEMAQIAYAVEHGATYFVTNRDLTIPRELGIAPGCGSM IMAVINATGVEPVSSAGKPESAMYDEARILAAHDDGEPVDKEQCLAIGDRLDTDIEAGNR GGYDSLAVLTGVTDPRELMFAPAYLRPTYIAKDLRGLNEPAPEVVHDEGAWLCRDAKARV DGDRLYVTDITSVDGLRAACCAMWAAADSGRDVSGVIVPEFRIS >gi|222441570|gb|ABXX02000003.1| GENE 390 397375 - 399138 2460 587 aa, chain - ## HITS:1 COG:no KEGG:BAD_0913 NR:ns ## KEGG: BAD_0913 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 581 1 579 579 582 80.0 1e-164 MAEEQRGSRGKSYGNHKSYGSGKPGDRGGKGFKPRGNGGKSYGHKSGGFHNDDHKGGYRK GNGGNFHRDRDFRRDGEGEGQERRFHNGPRKFNRDGERRDDHRDYRGGRGDNPRYQRDGE RSGFRRDDRRDGNRKDFHRDGDRRNFRREDGDRRNFHRDNDRRDFHRDGDRRNFRRDDHR GNDRRDGGRRNFRDGDRKDFRRDDQRRDFHKDRDQQQGEERREFTREEKMAYREEKRGEY MAKPRRNSDGTVSFPSQNPYTHRRPDEPKMPKGIEWRMLTTDDRERLRGLSKEHAENIGL HILAAYTLEESNPELALEHAKWVARQASRIDFARETLAFVAYRQGDYKLALREFRTAFRM NGFLDYLPFIADCERGVGEPKKAIEVAVSDDAKYLRGEAKAEMFLVYAGALGDLKMWDKA IEIVHTLGRSKGLAGEYRMRAVQAEQYFLEEAGRTDEAIALDRLLDKLELQYADVEDDET SDDLVVEYDMQELNDELMDVLGISEDDAQYAPEDPENEEDESEAIDENGETNDETQLEAE ETEAGAESDDEPAEADDAAEDDADDDGEAEEAEESSDASSESSEDNK >gi|222441570|gb|ABXX02000003.1| GENE 391 399223 - 400530 659 435 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 22 404 16 388 418 258 39 3e-67 MAHVIDFKEAGFESVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGN LVQLINMRHLQAAGHHPIALVGGATGLIGDPRQSGERTLNPKDVVAGWAERLKAQIGGIL EVEGSNPVRFVSNYDWIASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFS YQVLQGNDFLHLFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGK KFGKSEGNAVWLDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNP GAREAQRTLAWEVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGE FAKAAVGDRVAEAGMKAGLFKSISEARKTIKAGGVYLNNARVKDEEQVLNENDFLHGRFA LIRRGKKALGVVENV >gi|222441570|gb|ABXX02000003.1| GENE 392 400701 - 402545 1496 614 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 422 578 6 161 270 94 31.0 7e-19 MDRKGMKVAAKKAQRKHYWMIVAICLFASVFGVAYTSSTLSVSTNISISTPQTEDSTQSN DMYDVLQDLAVGNENDAREKVKQNQEQIVNNDTDATFGRRRGVIASLLNSFASGSMVIAV ADAINSVTHNGGVSIAVPVILSLAVYIFVWLFIQETYRIVMARMLLEGRSYNKLPASRFF YPIHTRKWPRMAWTMFVENVFLFLWSLTIVGFFIKQYSYRMVPYIVAENPNIEALDAIRL SRRMMKGHKWECFVADCSFLGWYLLNLITFGLSGIFYSNGYNAAFFAEYYVYVRSMAKTT GIAGSEMLNDEYLYFKADPQTLHTTYADVAQSVAQLEQNLVPAPKPHGFTGFLSEWLGIR ILHASAVNRYEEYREDLHQMQIGENILNGSIYPGRLAPAPMPFKFRESRTISADRSYSLV NLIMMFFIFCFVGWVWEVGLAFISEDMFVNRGTLHGPWLPIYGTGGVIILVLLKKLREKP ALEFVAAMVLCGCLEYFSSWYLEMTHDGQRWWDYTGYFLNINGRICAEGLLTFGLGGLTI VYLLAPALDNLLSRIDARKLGIVAAVLLVLYCADQVYSAQHPNVGAGITDYKGSDTSLEA PTPYEIRKRSDGLS >gi|222441570|gb|ABXX02000003.1| GENE 393 402643 - 403446 736 267 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 4 267 3 268 270 128 29.0 1e-29 MLMLEYLFLWFLFYSFAGWVYESILVSVSERRLVNRGFLNGPICPIYGCGAVLAIVLLHD LHNPFAVFLISSIGACMLEYVTSWGMEKLFHARWWDYSHRRFNIQGRICLLGAIVFGLLG VLITDVIQPEVNRITQMIPLPVVHWMCVIFMAFIVADTIITVLGIIDLADNLAKFSETVQ AYAEKAGDSLQWGKDIFRDKFRDKVQDKVQDWSDSSQEILANMQATAASILNKQQRRMIN AFPRLRFTDSIKYSKIIETLHEMLRRK >gi|222441570|gb|ABXX02000003.1| GENE 394 403459 - 403896 245 145 aa, chain - ## HITS:1 COG:CAC1667 KEGG:ns NR:ns ## COG: CAC1667 COG1418 # Protein_GI_number: 15894944 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 9 130 43 159 173 94 45.0 9e-20 MQIERVCYQHGVVTTFAHSIRVACLAVWIADRLRLWHRVDLHSLIRAALLHDYFLYDWHA HDGGRHRMHGFTHGGTAMRNAVRDFHLNRVERDSIENHMFPLTPIPPRYLEGYLVTVADK ISATRETVSLERFYKPKVNMHTSGK >gi|222441570|gb|ABXX02000003.1| GENE 395 404001 - 405488 1979 495 aa, chain - ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 12 463 10 456 477 477 57.0 1e-134 MTESTTNGEHLALWGGRFKSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLL TADELQRMEDALDELQRRVDSGAFAPIEDDEDEATALERGLLQIAGDELGGKLRAGRSRN DQIAALIRMWLRRHSRVIAKMLLGLAATLTEQAEKAGRTVMPGRTHMQHAQPVLLAHQLM AHVWPLLRDVERLADWDKRIDASPYGSGALAGNTLGLEPVAVARELGFSKVTANSIDGTA SRDLVAEFAFIAAMAGVDISRLSEEIIIWNTQEFAFVRLDDAYSTGSSIMPQKKNPDIAE LARGKSGRLIGDLAGLLTTLKGLPTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVGTMV FNKERLEAEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKIAEDRGQELWDLADDDF IEVFKEFLPADKAPEVREVLSTEGSVSARNGKGGTSPLRVREQIVSAKTAIEQLRAFANS VSDGPAYKTPESLLK >gi|222441570|gb|ABXX02000003.1| GENE 396 405599 - 406837 1680 412 aa, chain - ## HITS:1 COG:Cgl1367 KEGG:ns NR:ns ## COG: Cgl1367 COG0137 # Protein_GI_number: 19552617 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Corynebacterium glutamicum # 5 402 3 400 401 528 63.0 1e-150 MSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRALACGAVE AYVVDARDEFANEYCMKALKANALYEGVYPLVSAISRPLISKHLVRAAHQFGADTISHGC TGKGNDQVRFEVSISSIDPTLKAISPIRDLSLTRDVEIAFAKEHKLPIVQTEKSPFSIDQ NVWGRAIETGFLEDPWNGPTKDCYSYTDDPAFPPVEDEVVIEFKQGIPVKIDGHDVTPLQ AIEEMNRRAGAQGIGRIDLIEDRLVGIKSRELYEAPGAIALITAHQELENCCLEREQHRI KRDIDKRWAELVYDAQWFSPATQSLNAFIEDTQKYVSGEIRMILHGGRAVVTGRRSDTSL YDYNLATYDSGDSFDQKSSNGFIDIYGLPSRVAAARDVKFGNGIEVPENSVE >gi|222441570|gb|ABXX02000003.1| GENE 397 406933 - 407448 527 171 aa, chain - ## HITS:1 COG:Cgl1366 KEGG:ns NR:ns ## COG: Cgl1366 COG1438 # Protein_GI_number: 19552616 # Func_class: K Transcription # Function: Arginine repressor # Organism: Corynebacterium glutamicum # 13 164 2 151 156 104 44.0 1e-22 MTDQTPALQRPATRAARLSAIEQALLTRIVTSQSQLSQILADQGIEVTQATLSRDLDEIH ATKTRLADGTVAYALGRQPEESASANPDAKTEQQMNRVLSGLVTSVAAARNLVVVHTPSG AAQYVASVIDKQPIDGVLGTIAGDDTVMVICADDDYAKQRAQWLLDVVSKG >gi|222441570|gb|ABXX02000003.1| GENE 398 407448 - 408416 1271 322 aa, chain - ## HITS:1 COG:MT1694 KEGG:ns NR:ns ## COG: MT1694 COG0078 # Protein_GI_number: 15841112 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 6 310 2 303 307 343 56.0 3e-94 MATPELRHMLRDDDLNHEEQKQVLELAIKFHNDRFYHQPFAGPQGIAVIFDKPSTRTRSS FSIGVAELGGYPLVIDKSGSQLGRGEPVADTARVLDRMAYGVVWRTFGQDRVEEMAKYST HPVVNALTDEFHPCQILADFQTIAEHRGGVDNLKNQTIAYLGDAANNMSNSYLLGGAVAG MNVRVAGPNGYLPDPQIVADAEAIASETGGSVLVTTDPKEAVAGADCVFTDTWVSMGEES EYAIRSKPFWDYQVNAELMSYAKEDAIFQHCLPAYRGKEVTSEVIDGPQSVVWDEAGNRL HAQKALLTWLAGKARGDESLLA >gi|222441570|gb|ABXX02000003.1| GENE 399 408465 - 409427 993 320 aa, chain - ## HITS:1 COG:slr1022 KEGG:ns NR:ns ## COG: slr1022 COG4992 # Protein_GI_number: 16329751 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Synechocystis # 1 310 120 421 429 233 42.0 4e-61 MYFGNSGAEGNEAALKLAKLYGRTLPGASPAIGGKPARIIAMTHGFHGRTMGALSATWKP TIREAFEPLVPNIEFVEAGDETALHDAFAETGPGKYGKGPVAAVIMELIQGEAGVRPLGA DYVKKARQMCDDNNALLIIDEVQTGIGRTGSWFAFQREDLAGGVVPDIVTFAKGVAGGFP MGGMISFGAKLSALFTPGSHGSTFAGNPLGAAAAMATLETIEEDGLVANAEARGQQLRDG IMACVNPLFVSVRGRGLLDAVELAHPCAHAAMNWALEHGLIVNAVAPDALRLAPPLVVTE QDIDQAISILAKIPTDLPND >gi|222441570|gb|ABXX02000003.1| GENE 400 409189 - 409761 107 190 aa, chain - ## HITS:1 COG:MJ0721 KEGG:ns NR:ns ## COG: MJ0721 COG4992 # Protein_GI_number: 15668902 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Methanococcus jannaschii # 16 112 6 102 398 99 45.0 5e-21 MATEQLENLGSEDAKWLGEYSRVHMNVFGTPLRVMDHGEGAHIWDIDGNEYLDFLAGIAV NALGYAHPKWVKAVSEQAAKAAHVSNYFATEPQIELASKLIELAGAPRGISCVFRQLRSG RQRGSTETRQTVWPHLAGRIACHWRQTGAYHRHDPWLPWTYHGRVVRNVEAHHPRSVRTA GSQYRIRRSR >gi|222441570|gb|ABXX02000003.1| GENE 401 409751 - 410707 945 318 aa, chain - ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 13 307 3 295 317 341 62.0 1e-93 MTKELKGPGFHFDVHTDLRADQKAEVLIEALPWLEEFAGQRIVIKYGGNAMIDDHLKACF AEDMVFLRQVGLHPVVVHGGGPQISHMLKALGIKSEFKGGLRVTTPEAMDVVRMVLTGKV SRELVGLINAHGPFAVGLSGEDGALFSAMQRKPIIDGSPTDIGLVGDVVSVDASAVEDLI NAGRIPVVSSVAPNEDDATEVLNVNADSAAAALAAALGASKLVVLTDVDGLYADWPDRDS LIGRIGVENLRDMLPDLESGMRPKMEACVRAIDGGVPRAHIIDGRKPHSILNEIFTTDGI GTMVVPEDGIEMRSSYGN >gi|222441570|gb|ABXX02000003.1| GENE 402 410718 - 411890 1076 390 aa, chain - ## HITS:1 COG:ML1407 KEGG:ns NR:ns ## COG: ML1407 COG1364 # Protein_GI_number: 15827737 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Mycobacterium leprae # 3 390 19 407 407 315 47.0 7e-86 MSVTFAQGFSAAGVEAGISAVEGKKDLALVVNNGPLDMAAGVFTSNRFCAAPVQWTRKIV ADGHVKAVILNSGGANACTGQPGYEQSKATAQKVAALVGAKDSDIAVCSTGLIGELLPLD HVLSGADKAFAALADTAQAGADASHAIMTTDTKPKTVELEGSNGFRVGGMVKGSGMIAPQ LATMLCVITTDAVVSAGQLQAALNTGVEMSFNRIDVDGCMSTNDTVLLLASGASGIEPDP DEFNELVAQATASLARQIVGDGEGASHDIRVKVTGATTEDAALACGRAVAASNLLKCAIF GNDPNWGRIVSSLGTVPPEVAPYDSNKVTVDVNGVRICENGGAGRDRSEVDMTPREVHID IDLHAGNAEATVWTDDLTHEYVHINADYES >gi|222441570|gb|ABXX02000003.1| GENE 403 411887 - 412981 803 364 aa, chain - ## HITS:1 COG:Cgl1361 KEGG:ns NR:ns ## COG: Cgl1361 COG0002 # Protein_GI_number: 19552611 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 6 364 15 357 357 287 45.0 3e-77 MAKYTVAVAGATGYAGGEALRILAAHPNFEVTCVAGHSSVGDKLGKHMPHIPQLADLVVE DTTPEVLNGHDVIILALPHGASGALASQLDPNAVVVDLGADHRLEEKTAWDEFYGGDFYE HWTYGMPELITGISEDGSYQHQREVIPGTKRIAGPGCNVTATTLALQPGIAQGLVEPADI VADLVVGYSGAGKNLKRVNLLAAEAFGSALPYSVGGTHRHIPEILQNFAHAAGKNASAAN EFTLGFTPILVPMARGILASVSAKLTDTALNMSDAEIRQVWTDAYADQDFMIVLPEGVMP ATANIIGSNAAHIQVAIDRKAGRLLAFAAIDNLNRGTAGQAVQSLNVALGLPEDAGLTKI GVAP >gi|222441570|gb|ABXX02000003.1| GENE 404 412904 - 413095 81 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGREDTEGLASRIPCRAGHGYCVFGHVTPLSIDSLKTHSAYTLCTTLHNYAFISCRIVVI ARL >gi|222441570|gb|ABXX02000003.1| GENE 405 413127 - 413849 758 240 aa, chain - ## HITS:1 COG:no KEGG:BDP_1297 NR:ns ## KEGG: BDP_1297 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 225 1 230 245 199 55.0 6e-50 MNEPEQYQPTNTDERQETADAAPVSSSSDAAASSQPEYGQINQPEYGAMSSQLPAGYDPY VYGAPEPEPQPADAVQQQNMQYQTGQYPSNGQQPMPPYNANGQRNPYGANPYGPNPYDPN QYPQQGNMPYLPNLDLNDPRQNPAYGHWDAYAIMSLVLAVLMPVPVLPALVGAISMWRTK KLHMKGYGLALAAVIINVLYTLAVIWLAMHGLSVADLYNETLQNMLGGAGSGQGDESIAA >gi|222441570|gb|ABXX02000003.1| GENE 406 413880 - 416489 3361 869 aa, chain - ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 174 869 1 673 673 429 38.0 1e-119 MPMVDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQ KNGKIINWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLPGDFKIE PRKTYGHISNGMCASERELGLGDSHDGIILLRKYGFTPEEYEKLQPGDDAMHLLHLDEPL LEINITPDRGYAFSYRGVSREYHHSTGAAYTDPAVALNEKAPITKGLPEGTKTDIEVIVD DNNPIHGVVGCDRYYARAVKGFDPASHTPNWMRRRLTRAGMRSISLAVDVTNYVMLDLGQ PMHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLSVEDLLITDSPNGERGSRVLGIAGV MGGMYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMA AELMVRYGNGEPSEHPTDFNTVSNRRPILFKASEVARVAGLDTDVNTISDILTDIGCSVA GGGNGEFSVAPPSWRPDLNEPCDLVEEVARLVGYDEIPVTVPPAPVEGQVGLTAEQLRKR QVADELAEYGMVETLSYPFVGDEDYKNFALDVAETKNVSVEIANPLAGDRPFLRRDIIPT LAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPDQPM HVAGILTGNAVDSGWLGERRAVDWSDAVEAVQRISDRIGAALTLDQPKAEDVPAQWHPGR AARVMAGDVFVGMVGELHPHVNEVLGFPAHSAAFELDLTALFATLSGKPVQAKPISTFPP VKQDLAFTVSTDVTAAELKQVIVDAAGSSLESIELFDVYTGDQLGEDEKSLAYAVTFRAP DKTLASEDSEAIRKRIVDEASKLGAQLRA >gi|222441570|gb|ABXX02000003.1| GENE 407 416497 - 417564 1492 355 aa, chain - ## HITS:1 COG:Cgl1356 KEGG:ns NR:ns ## COG: Cgl1356 COG0016 # Protein_GI_number: 19552606 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Corynebacterium glutamicum # 11 351 10 341 345 393 53.0 1e-109 MAEGAVFDAQAVTDAVAEGIAKIENASSMEELKAIKTQYAGAESAMTQASKAIGALPKDQ KKDAGKIMGKLRADFGRAYGTKEQQVKAEEEARALAAETVDMTLPVNRKPLGARHPLPKL MEDVEDFFISMGWQISDGPEVETEWYDFDALNFGPDHPARQMQDTFYVKGNQAKDAAGFV GSNMVLRTQTSSDQVRGLLTRGVPLYIACPGRVFRTDELDATHTPVFHQVEALAVDKHLT MADLKGVLDKLAVAMFGPEAKTRLRPSYFPFTEPSAELDLWFPDKKGGAGWLEWGGCGMV NPNVLKSAGLDPEVYTGFAFGVGVERTLLLRHDINDMHDLVEGDVRFSEQFVMGE >gi|222441570|gb|ABXX02000003.1| GENE 408 417630 - 418502 635 290 aa, chain - ## HITS:1 COG:AGc593 KEGG:ns NR:ns ## COG: AGc593 COG0566 # Protein_GI_number: 15887691 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 279 26 277 290 122 32.0 1e-27 MPIKSEVIANPKSERVRRVSELADRKGRKRSGRFMVEGPQSVRELLTWHPGLVEDLYVEV ESAQPDASFATPVVAQMAGKAMQSGVYVHKVTHAVMHRMSADAQGVLAVADMQAFLDSSA APDDFDEHAMVAAFWQVRDPGNAGTVIRSADAAGCSAVVLVDDCVDVFNPKVIRSTVGSL FHLPILTMGTDDFFAWCDTHELAVYAADVYGTDSRQPESLTDVIAAPETLAGAKAVLFGN EARGLTKEVLERTDRIVSIPLYGKAESLNLGTSSAVMLLSLAMSSHVERM >gi|222441570|gb|ABXX02000003.1| GENE 409 418534 - 418773 184 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPRPCRVFNSENFPDSFHQQSQQTSQRAQSGRDMQGPTNDSSDSAGSQDSNTDNNSPDSQ QSGNAQSDAPALAKPLCCY >gi|222441570|gb|ABXX02000003.1| GENE 410 419059 - 419601 685 180 aa, chain + ## HITS:1 COG:FN0535 KEGG:ns NR:ns ## COG: FN0535 COG1611 # Protein_GI_number: 19703870 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Fusobacterium nucleatum # 2 175 5 178 192 153 43.0 2e-37 MNVTVYLGAHEGNNPVYKQAVAELAIWIAENGHRLVYGGSNEGLMAVIADTVLEQGGEVT GIEAQMFVDKGVAHKNLTQLTIVPNITERRTRMIELGDVFIAFPGGTGTLEEISEVVSKV CLDQLTQPCIFYNLNGFYDDMKALLQRMIDDGFSTGERQHGIYFASDLAEIEHIIAMHKA >gi|222441570|gb|ABXX02000003.1| GENE 411 419753 - 419956 145 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352214|ref|ZP_03743237.1| ## NR: gi|225352214|ref|ZP_03743237.1| hypothetical protein BIFPSEUDO_03830 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03830 [Bifidobacterium pseudocatenulatum DSM 20438] # 21 67 1 47 47 84 100.0 2e-15 MLRLPNLLIGWNPYPSATRRMDLRFIVCMIYSFVTMNIPFVLLYIFLGGVLLFSAYSLWE KDKNNRR >gi|222441570|gb|ABXX02000003.1| GENE 412 420193 - 420372 194 59 aa, chain - ## HITS:1 COG:no KEGG:Ethha_1826 NR:ns ## KEGG: Ethha_1826 # Name: not_defined # Def: HNH endonuclease # Organism: E.harbinense # Pathway: not_defined # 1 59 1 59 117 77 67.0 3e-13 MPRKPRRPCRHPGCPNLCEDGEQYCEKHRKEAERQYKHFTRGYSAGKRYGRQWKKIRDR >gi|222441570|gb|ABXX02000003.1| GENE 413 420723 - 421352 588 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 20 206 7 192 192 231 57 5e-59 MNGACHQGDGFDMDKDFLAIFNAIKADGANADYTKRGIDPLYSVGAGARIVVIGQAPGAV AEETRIPWNDKSGERLRDWLGVSRETFYDPERVALLPMDFYFPGHGRSGDLPPRKGFAEQ WHPALLALMPNVRLTVLVGAYAVRRYLHLKNSDSLTTVVRDYDAYIGRGFFPLVHPSPRN QLWMSRNPWFEAETLPALKARVNAALEQR >gi|222441570|gb|ABXX02000003.1| GENE 414 421848 - 422018 65 56 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0892 NR:ns ## KEGG: BLLJ_0892 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 56 598 654 932 68 57.0 1e-10 MHVVIVGFDRGTNAPALYEYDDINGEPVEARPAHINGYLLDASDVFVEARSQKTGP >gi|222441570|gb|ABXX02000003.1| GENE 415 422169 - 423605 1805 478 aa, chain - ## HITS:1 COG:Cgl2165 KEGG:ns NR:ns ## COG: Cgl2165 COG0174 # Protein_GI_number: 19553415 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Corynebacterium glutamicum # 3 476 2 475 477 616 63.0 1e-176 MTALETKADAEALINKEGIEYVSVRFTDLIGVQQHFTVPASEFLKDAFTDGMPFDGSSVE GFQAINESDMKLVPDVSTAFVDPFRKHKTLDVAFSIVDPLTDEPYSRDPRQVAGKAEAYL KSTGIADTASFAPEAEFFIFDKVRFENSMQRSFYEVDSIEAPWNSGVDTEDDGTPNIAFK NRVKRGYFPVPPIDHTQDLRDDMVANLQKVGLILERSHHEVAGAGQQEINYRFNSLQHAG DDLMKYKYVVHETAALAGKAATFMPKPIAGDNGTGMHCHQSLWKDGKPLFYDEKNYGGLS DLARWYIGGLIKHSSSVLAFTNPSLNSYHRLVPGFEAPVNLVYSARNRSAAIRIPLAGTS PAAKRIEFRAPDPSCNPFLAFSAQLMAGLDGILNHIEPPEPVDKDLYELPPEEHAGIKQV PSSLAEAMDALEEDHDFLTAGDVFTDDLIETWIGIKRGEIDQARLAPTPLEYELYFHI >gi|222441570|gb|ABXX02000003.1| GENE 416 423700 - 423873 90 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352221|ref|ZP_03743244.1| ## NR: gi|225352221|ref|ZP_03743244.1| hypothetical protein BIFPSEUDO_03837 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03837 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 57 1 57 57 99 100.0 6e-20 MTYSKDDFAKNWGSIVTNARICLCKTVQFVDIRVVMSLATSISFLKNLTACAQASGR >gi|222441570|gb|ABXX02000003.1| GENE 417 423954 - 424736 1072 260 aa, chain - ## HITS:1 COG:no KEGG:BAD_0944 NR:ns ## KEGG: BAD_0944 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 260 1 262 262 447 82.0 1e-124 MADKEEPKKKQSTIKQIIQIFKYTHAEDKALPWLCGGVFVAPIIVFVVLGIVFKWSVIGW ITSMILAVMLGLLFATMMLTNRADKVGYAKLEGRQGAAISVLGNINKAGFNFPQEPVWVD PKTKDAIWRGTGYNGIYLLGEGDYNRVKRAMDRQEQNIKGVTAGSDIPVYRIYVGQGKNQ TSLKNLRKTVLKCKSYLPTHHKNKLVAAIHPKSRFMLTKTELNILNERLRTLQMKNGMGI PKGVDPMHPQRISRRAMRGR >gi|222441570|gb|ABXX02000003.1| GENE 418 424684 - 424875 60 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MICLMVLCFFFGSSLSAIDFLTWLCGYSHWNGSLSGTMPYRMISAVSPLLTRIIGCAKAC HPL >gi|222441570|gb|ABXX02000003.1| GENE 419 424841 - 426322 629 493 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 491 4 457 458 246 33 9e-64 MTEQHFDIVIIGAGPGGYSTALRAAQLGKTVALVERDDTLGGTCLNRGCIPSKALLTAAH SVENVRQAERMGVNVALQSIDFGRLRDFRMSTVETMTKGLAGLLSHRGVTVFRGEAQLKN GHEVHVAPALGETQVLRSIKAGVGELVGSELTISGGDIVLATGSRPLPLPDDPFSGALID STQALELDTFPSSAVIIGAGAVALEFASLWNASGCKVTLLIRKDRVLSSWERRASMTLTR ELKRHGVNVVARTSVSHVDTGANLGATVHYRQGDDVEERTAYGEVVLAAIGRMPNTDADW FASNGIALDERGYVLTDAYGRTNVEGVWALGDITPGHALAHRAFEQGITIAETIAGLDPK PVVDETVPQVVFSFPEAASVGLTLSEAKSRDTIVDPQETAYPMLSNSRMLMSGEGGSMTI VSGAMADAPDVPLVLGVHIVSPIASDLIAEAEQLVGNHVPLADAAKLIHPHPTFSESFGE ALLKADGRPLHTR >gi|222441570|gb|ABXX02000003.1| GENE 420 426434 - 427036 697 200 aa, chain - ## HITS:1 COG:no KEGG:BAD_0946 NR:ns ## KEGG: BAD_0946 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 200 42 241 241 349 89.0 4e-95 MSLFNKKEETAQEPVETKVAETTSGKGRPTPKRKDAQAQNLRPLVPKDREASRKAAKARM RERENAEYDAMQKGDINHMPKAERLPWRIYIRDYVDARFNLGEFFIPVAFVILIGSIFVT YQWPALALPLMVLMYVYLFAVIIDVVIMWRKLKKKLIEKFGEQSVSKGMRSGSYAWSRAI QMRRWRLPKPRYDKRGHWPE >gi|222441570|gb|ABXX02000003.1| GENE 421 427187 - 428554 1652 455 aa, chain + ## HITS:1 COG:MT2598 KEGG:ns NR:ns ## COG: MT2598 COG0624 # Protein_GI_number: 15842054 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 6 440 28 447 470 282 40.0 8e-76 MAALPVEEVRSRVEADFDRIVNVLNKKIALQSISAKGITADHMKRSAEFVAEELSKVGVN AQVVQSHNPNGTPGAWEVIGSKIVDEDAPTVLLYAHHDVQPVPDASAWNTDPFVGTVIDT RLYGRGSADDGGGIAIHSGALQALGDDLKVNIKVFIEGEEEMGSPSFIPFIEEHKDEFDS DVIIVADSGNWSAEIPSLTTSLRGNTDIDVHVKALHHPVHSGQYGGPILDANTLASMLIA SMYDEHGDLVVPGVASEDPIGGLQRDMDEATVRTDAGIVDSYRLAGTGSLAARLWTKPSV TVIGFDAHPVEGSFNVISPETTFRLSLRTAPNQRPEEAQEALARFMVEHAPFGAEVWVDK LDNGMGWAMDPNAEATKDAMDAMEEAFGVAPVNKGEGGSIPFIPELQRIFPDAQVLVTGP EDPKANAHSPNESISLPSLKNNVITEALLLDKLAK >gi|222441570|gb|ABXX02000003.1| GENE 422 428687 - 429238 427 183 aa, chain - ## HITS:1 COG:Cgl1056 KEGG:ns NR:ns ## COG: Cgl1056 COG0619 # Protein_GI_number: 19552306 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 15 181 87 251 251 144 49.0 7e-35 MAKTSGAVLVNLGNVIVVSQGSLYLAVATFLRVAAIAVPGVILALGLDPTDLADGLVQIL HLPSRFVYGGLAGMRMFTLLQDDWRALGQSRRSRGLGDGSAIKRVFSQAFSLLVVSIRRG TKLATAMEARAFGSDAPRSQARESRLNAVDWLFYAICVAVPVIALSCAYFTGYWHWAFTG TGN >gi|222441570|gb|ABXX02000003.1| GENE 423 429198 - 429530 271 110 aa, chain - ## HITS:1 COG:no KEGG:BAD_0948 NR:ns ## KEGG: BAD_0948 # Name: not_defined # Def: cobalt ABC transporter permease # Organism: B.adolescentis # Pathway: ABC transporters [PATH:bad02010] # 2 100 14 112 292 175 85.0 6e-43 MEQLKTISVVPHRERHDDAKPASPSWFVAKINPVSRFIGALILCIPMFVTLDVVSASVAF ALEMLLLWIGGVAPWTVLRKTWPVWVAASGSFISVSLYGKNLRCRAGQSW >gi|222441570|gb|ABXX02000003.1| GENE 424 429532 - 431022 187 496 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 297 495 20 215 245 76 27 2e-12 MGTDAGKPFSAAGVVARDWGWRHASRKDFALRHVDFTIQPGERVLLLGASGAGKSTLMAG LAGVLGGDDEGELEGELLIDGTDARHSRGRSGLVLQDPDAQTILERVGDDTAFGCENLNL PKNEIWSRVRSSLDIVGLGYMKLDRSTRRLSGGQRQRLALAGVLAMHPGLLLLDEPTANL DPEGVKEVHDAVRGVLDRTHETLVVVEHHIDVWLDLVDRVIVLGKPESDSHVSGVIADGT PEEVFGSMAPVLTKGGAWVPGRTVESHIPESNQSSGNVVLRTEDLSFGREFALGERVNLA FHAGEITALTGKNGVGKSTLALTLAGLLKPISGRVSMDESMVPAHRENNVFTWKSRDLLG RIGMVFQEPEHQFVTSSVRDEVAVGPKSMGKTDDEAYAIADMMLERLNLKRFAPANPFTL SGGEKRRLSVASMLAAAPKVLVMDEPTFGQDFTTWTEMVRLIAGARDAGCSVIMVTHDEP LIEALGARRILVSEGE >gi|222441570|gb|ABXX02000003.1| GENE 425 431133 - 431747 857 204 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 15 199 14 199 201 110 41.0 3e-24 MIEEKQSSVVRKHNNKWRVVDIVVAAIIAVASGVIFWGWDIVCTAPLALFGAVTPGFEGL LNAFWLFAGPLAAIIVRKPGAALFAETLAAALELTMGNQWGVGGSLIVGIMQGFGAEIGF AVFAYRKWDLLSTTIAGAFAGIGCGLYYWITNPAWSTVRASIYLGTSIISGAVLAGMVMY FLQVAIAKTGVLDRFESGRTQELV >gi|222441570|gb|ABXX02000003.1| GENE 426 432031 - 433152 1144 373 aa, chain - ## HITS:1 COG:ML1080 KEGG:ns NR:ns ## COG: ML1080 COG0489 # Protein_GI_number: 15827530 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium leprae # 7 371 11 367 383 290 44.0 4e-78 MTDERTIEARIYERLSKVIDPELGRSVTDLGMIAAIDAIPVEGKANTYEVRVEVELTVEG CPLSQTITNQINGAVASYPDATLLPRIEVGSMSQDKLTQLVAGLKAERKQNPFNKPGIKT RIFAIASGKGGVGKSSVTANLAATFAALGYDTAAIDADIYGFSLPRLFGVHAQPTNLNGM LMPVTAWGTKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGD MAISVAQALPNAELVVVTTPQPSASDIAVRSGLVTLQVPMKVRGVVENMSYYEHKGERLR IFGEGGGARVSEQLTESLGYDVPLLAQLPLEPELRETGEAGRPAVLNEDGSLRADDIGET FRNLAESLMRRPL >gi|222441570|gb|ABXX02000003.1| GENE 427 433246 - 435921 2302 891 aa, chain - ## HITS:1 COG:MT3094 KEGG:ns NR:ns ## COG: MT3094 COG0272 # Protein_GI_number: 15842572 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Mycobacterium tuberculosis CDC1551 # 75 546 3 461 679 483 54.0 1e-136 MTRHDDSEQLAWDFDASEMGGDTGSASTAVVPDGGVSSYAPGSERWIAALQPTDADAMRL TRLDVSSISAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARIRCLQALEAQFPS LDSAQSPTHRVGGTFSNDFASVRHPSRMMSLDDVFSLEELHEWYDGVIRGLDWPETKPLP MTCEVKIDGLALNLIYRNGVLEQGLTRGDGVIGEDITLNVRTISTIPQNLAGPEEDIPEF VEIRGEVFMRWDDFNTLNKENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGI GTLQWGAKRGADHDAVNNQSEAYGLYKKWGIPVSPHNREVTTFSQILDMIDYYGEHRGDI EHALDGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPV AILKPVYVAGSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERREGHED QLRRFVMPSQCPSCGAQLAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGD QSAIALTNPEEDRPDSVATYAPDITEIVVAPGQEPEPYEPVEGLELPARQTPVLSSEAGL FSLTSSDLQDVRVWREAPIIEIHETVGKNGKPKKTRKRIGGSGLWHQVPAFWTTPTVARK RKDEVDGSAEYPGYDVPEDAMVVREETKVSRSGASSVQPVYIRPAENTRKMLDEIDKARH ADLWRVLVALSIRRLGPPTARVIANTFGSLDAIERASVDELSQIDGIGPEIAESVVTWFA SAKEPGDWRGTVLEAWKAAGVGAEQVEISTLPQTLEGKTVVVTGSLIDFSRDSAKEAIIS RGGRASGSVSKKTDWVVIGENAGAKAAKAEELGVPMLNEDQFKILLENGTV >gi|222441570|gb|ABXX02000003.1| GENE 428 436047 - 436253 154 68 aa, chain - ## HITS:1 COG:no KEGG:BDP_1331 NR:ns ## KEGG: BDP_1331 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 68 1035 1102 1102 125 91.0 5e-28 MHVLTQAGLPVWPNTQVASLVRKAARVCVDEGMFVPARTLSVAASRMDDEERDGADVVQM QFLRSLNN >gi|222441570|gb|ABXX02000003.1| GENE 429 436162 - 439371 2408 1069 aa, chain - ## HITS:1 COG:no KEGG:BAD_0953 NR:ns ## KEGG: BAD_0953 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 1008 1 1007 1106 1543 78.0 0 MLNHAMQGVRQLINHNKHPHNTADANPFGKALDTPDDIVDELTRNAIKLNPLIKRHIIKG FEGIPSTLQLGWAQLPQTQGKAFSIGLFTDNNHFAQIALADSKARVFAGTNPEMDVQDLE PRFIFVKEETLTLPDGPRFGHATNGAPKMVRASQGGVVGRMPDGRMMWLASWLKVGNRYT LEQMRANLPETMRFDLEYRDAITIAFFAAYMLPQMNGLLVGFGTGNIFRRLNREAPMGAI RRSIRDTMSARSHGMRASGLEDYFADLMREAGALDKDQGLEAVHGAEPLHLYTSSYSGCY FFAWDSTLPFSASLRALNIEGNLNRFAAVSSWLERNARIGKLPTEDTVTRAEAAQIDMAL LENPALIALKPDDEFGAILDSQQDDGVQAVMRLVDIAAETRRSIAENTKDGEDGTAFGAE GGSEWVYRQTMSRLLRSMRLPYRFDVDFRCSLRDGNMAIGFTSAGVSMMPSTKYDVSRHA WVDMTDAERARMSADYNLRVGLMMAALSFGADPGIQRVSMHIDSIGLEEAVAEQDSAISE LMSEALAAFERIRTGDMGVSGSKADPKDGDFHGDPSRPVAPRSADMGVDGVNSEDTDDAL NSQFEDLMRDIDFDEVTFAVPDEIADDSSSMDDGSAQGVHDGALDAGLIGFGDFDGNGDD PLSQLRKNPTVRNLVTVTFTRSEFMERLGECGLSDPTGTYRMFDAEMDVDGLGALKPVDA TFDLRDSRFSPSGSQEEPELSDAIFDHDTAQLFGCRDMSGLSIQRVDLLQRAVGEFHRIA QDSHLESVAKAKQAMDVINTIADPELTSLAPQVTSALIDGKDTPDFSFRLADELDAERIK ARDLLFSGQVDQSVELAEAALERMDRLFASNPGVPRYFNSYAERVIYNRMFATEGERTVL IPDNLFYAHMELADVLAQVKGVKAALPHLNAMVRYAPAYPLSHLKLAVQLARAEDWDPAR AACLNALHVALDREDASFAYYRLAYAEWMCDHFDIAAAAYIMSEEIAPRANRHAGERAAG IDRTRAIAMHSGAHRRSGSHARAYPSGTAGMAQYPGRILGTQGRAGLCG >gi|222441570|gb|ABXX02000003.1| GENE 430 439480 - 441666 1276 728 aa, chain + ## HITS:1 COG:no KEGG:BDP_1332 NR:ns ## KEGG: BDP_1332 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 727 1 733 734 895 66.0 0 MTFSKQRFQARHRVCAAIVAAFVVVVLVECVLCNVPFFRSLAASGDSAAAYNTLGPGLER RDDGLLEVTDPTQAYLQVAADGSSEYVRIVPVSDEVMGGVPAGSRVLRTVRVRADADRVA GSLCSVSLDSSRSLYVRAAAGRTVRVQVVEPKGSLIPFDAVRANVRVPFSVSPLRVALLV LVMVLVALWRPGSRLWKVPLNTSSVRQRVTLGVLLTVPGLVTVAAVAWQLVSAVPLSFHT DGMYTYDYDQYDHVARALLNGHAWLDLDVPDALRDADNPYDVTTRQQLLADGVSPVYWDY AFFDGRWYSYFGVVPALLLFVPYRAITSLWVDGGLMMPSGAAVPLLMFVFLVFACLLTIR VIERVRPHVSLAAVSMLCVFVVLASNAPYLWYRTNFYSVPIAASLLLSTLGLWLWMGAAH PNAADAGGDGGANTVESLSLPRLAAGSVCIAANVGCRPSFVVVAFAAFPLFWPQIRAIAK QLRDGVFASGAHGRVCAMLHALRAPLAVLVPALVVVVPLFAYNMVRFSSPFDFGSSYQIT VTDMTSYHQSWSNFIWTVAYYLFLPLRWTNMFPFLAVDPTPLKDWGFTEAMPGGLFVMAP LALASLACPFLRRHMRARGHVGMWRTLTTFLLLSLLIVALDARLGGLGWRYIADFGWLFA LASLPLLLIALDCDRPRLCWLLRVLVLALLLFMLAVTVLSLFLYGRDDELIRNNSGLFHD VQSWFTLI >gi|222441570|gb|ABXX02000003.1| GENE 431 441690 - 441878 140 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADATTAAVQRLTRGWLDRSGSDFITDVSNKGSSHIEQLRHHYYSQNSEQTGDFIGQTVI KP >gi|222441570|gb|ABXX02000003.1| GENE 432 441805 - 443466 1642 553 aa, chain + ## HITS:1 COG:no KEGG:BDP_1333 NR:ns ## KEGG: BDP_1333 # Name: not_defined # Def: arylsulfate sulfotransferase # Organism: B.dentium # Pathway: not_defined # 1 553 3 555 555 855 82.0 0 MKSLPLLSNHPRVKRWTAAVVASAIALGVCLASYDNVDAAIRQNRIERLNARIENVYTAD YQNMADDKLEQEKSKSAATEDDMFVTEDPYGTNTTSLYVYFTTDDSVSVSYTVHADGYAD FTRDAYQQSQYSKTHEFQILGLIPGEKNTITITLTNADGKSRTHTFEHRGASLLGNEEVQ LEQTVVADSGEDLGDGLYAILGNDSDEQDFMFYYDTNGVLRGEIPVLYYRSHRLLFDDDG LMWFSASTHHMAAMNRLGKLEKIYDLGSDYILHHDYAMDANGDIVLLATEMGRDDNAVQD QVIKLNTSTGSVTRLVDFGELFADYKASTTHAGTDESDSSAQNRWDWLHCNTIQLLDDGS ALFSARETSTIIKVDDLESDPTVDYMIGEPSVWAGTDEVSSFLAKDGDFSDTGGQHSITY VADDSLPDGQYYLYMFDNNFGTSLTRPDFDWSVIDGISIELSSDTANSRYRKYLVNENAG TYTEVSSFDVPYSPYVSSAQELDNGQILIDSGMKGLFGQYNKDGDLLAQFKMTLNSAYIY RVYKYDFSGFYFA >gi|222441570|gb|ABXX02000003.1| GENE 433 443569 - 444378 949 269 aa, chain + ## HITS:1 COG:CAC1368 KEGG:ns NR:ns ## COG: CAC1368 COG1122 # Protein_GI_number: 15894647 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Clostridium acetobutylicum # 25 251 5 225 279 95 27.0 1e-19 MVAMGFFDSLFSSKRPEATHDVTFTLDQAGHTYEDGNVGLEPTSLTITPESKRVAVIGLN GSGKTTLLQLLDGALSATSGSVRIDANGAAYDPSVKRDLKRIESMIGRVRREEIPNSYYK ADSIREAIDEPLKKHKVPESERQAIIGNLFAHFDLAAVAREPASALDSEKRHLLAIASAL SFSPAVIVADEPTKGLDEVASAHVAKALFSYDKQVVFATHDTELITRAEYAIDRTLVVDD HQVVFDGGPHEAVAFYTDLIRAKYEASKA >gi|222441570|gb|ABXX02000003.1| GENE 434 444456 - 445619 1117 387 aa, chain - ## HITS:1 COG:PM0052 KEGG:ns NR:ns ## COG: PM0052 COG0436 # Protein_GI_number: 15601917 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pasteurella multocida # 14 279 20 292 404 103 29.0 6e-22 MRFSSRVDISEPNPIAKAEAEAKANGITLGKLNDSNPTKHALASELLPDIYGAEPRGQRY AREALAAFLHEQGNTATADDLYILSSTSEAYSWLIKLLCNAGDAVLAPKPGYPLIESIAR LECVDMIEYQQRFDGSWYIDVAELREALEGEDGGRIRALVLINPNNPTGSYVKASEREAI VRLCHDHEVAIIADEVFYDYDLEPFDGNARLAGETGTLTFALDGFSKTLAAPHAKVGWIQ VSGPAAEVDEAKRRLDVVADDYLPMSEIIAKQIPAMLGAAAAQTARVRERVQTNLAALHT MLDDDEQGMVSVLRAEGGWNVLLRVPSVLDENELVLSMIEKHGISGQPGYFFDMTSNGYL AISLLPEPDEFRHNVQTVLDTVNTMIG >gi|222441570|gb|ABXX02000003.1| GENE 435 445776 - 446543 1158 255 aa, chain - ## HITS:1 COG:DR0823 KEGG:ns NR:ns ## COG: DR0823 COG1940 # Protein_GI_number: 15805849 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Deinococcus radiodurans # 8 251 5 244 279 219 49.0 3e-57 MIETAQAFGVDIGGSGIKAAPVNLEKGEFAEPRLKILTPEVSTPKAVGEIVRQQLEHFEV PESAPVGIAFPAPIHVGEKLGYMANLDQSWVGVDVTEVFSEACGRPVTVVNDADAAGLAE QQFGAAKGQDGLVVATTLGTGIGTALIFNGELIPNTELGHLELLKGKGDAEKYAASSIRE KLDMGYKKWAKRLTKYYSLMEFYLDPQLFVVGGGVSRVSEKFLPYIDIKTPIVAAKLHNE AGIIGAAYYASIKQK >gi|222441570|gb|ABXX02000003.1| GENE 436 446536 - 446739 88 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPMRCVGMGRIVCRKQSQIFAFHCDRLCNRIHQLCIVGAFWGMGRVTMAFTGSIYPLCTL IGEVEDD >gi|222441570|gb|ABXX02000003.1| GENE 437 446786 - 447808 1250 340 aa, chain - ## HITS:1 COG:MTH348 KEGG:ns NR:ns ## COG: MTH348 COG1216 # Protein_GI_number: 15678376 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Methanothermobacter thermautotrophicus # 16 222 2 216 313 97 29.0 3e-20 MERMTEKQVAKNTIEKLAIVVVTYRRQQLLATLFESIEKLTVAPWRIIVVDNEHSEATQG MVDDFREAVTAQWGNTIADQSGNESRVVYAPQSDNLGGAGGFSAGVKKAYELGAEWFWVM DDDVAVMPEAIERLAKWTGSHDVIQGSRYDYDGGPFYWQYDFIVPLGIPNPIAPAAFGRP GYRVMDTLCFEGGLFRRNIVEQIGLPDPRFFIYWDDTMYGYRASKVTNPIVVPDVILRRT REIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMSFGDYRPLMFGFGTLLTAAKEVI RLVMVDREHAKTGLVQIVKGWWDSRKLLHDPDWKPMPPLK >gi|222441570|gb|ABXX02000003.1| GENE 438 447849 - 448034 191 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQQSLDMPPYAGVNHQVQRVQASLGPSQPDEHGFPCITPYIMAKPHEMCKSPSVEWNRA A >gi|222441570|gb|ABXX02000003.1| GENE 439 448019 - 448786 1030 255 aa, chain + ## HITS:1 COG:BH2679 KEGG:ns NR:ns ## COG: BH2679 COG0819 # Protein_GI_number: 15615242 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Bacillus halodurans # 28 242 3 216 224 146 34.0 4e-35 MTAVTSTTDFDYEFDAAKGIQRDNLPPFAQRMRKAADLVWEEGYQQPFIRELGEGTLQRE RFAFYLLQDFRYVNDYARVHALGLAKATDPEIMAFMLKVQNGALQVETEVHRSYLASYGI TEEQMNNVRQSAFARAYTSNILSIAYGKDILDILVAVLPCAWVYADYGYRLAAEFADTLD NNPYKSWVDMYKTDEFWQDSVWLLDHIEKLVADASEERKRELIDIFVTGVENEYMFWASA YDMQYTWKPEWNQAR >gi|222441570|gb|ABXX02000003.1| GENE 440 448912 - 449217 178 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Anoxybacillus flavithermus WK1] # 3 99 2 94 97 73 45 2e-11 MALTKKQVKQLRGLATKLNPLIQVGKNDLSENAIKQADETIEKRELIKCSVLDGSGLTAK EAGEGLAEELNAELVQVIGNRFVLYRRSHRDDVEHIRLVRE >gi|222441570|gb|ABXX02000003.1| GENE 441 449289 - 451658 1918 789 aa, chain - ## HITS:1 COG:MA1418 KEGG:ns NR:ns ## COG: MA1418 COG1122 # Protein_GI_number: 20090278 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 12 532 2 501 528 219 28.0 2e-56 MNPDSATNTIAVELHDIRFTYDSGATWALDGVNLTVRQGERVCLAGPNGSGKSTLSRIIA GLAAPDAGHVTLLGNNVFDDSGAHADAYRSARHGIGAVFQHPEDQIVTTITEDDVAFGPE NLAIAHDDIDMRIAMSLDAVDMSGQREADPTRMSGGQQQRVAIAGMLAMNPEILVLDEPT AMLDPQGRADIMHILDELQQHGTTIILVTHHRDEFVNADRIIRLDNGRIVQSARGNTASI PEMDESGTAQEDNPIAKSNIANGASKPTSAVPIIEIHNLIYQYPNSSKPVLDKLSITINE GETVAITGHNGAGKTTLARLLCALEQPQSGSITVNTIPVARQRANGNMQSLKRADREKLR ATIGYVMQHPERQLFAETVAEDVAYGPRNQRLDEAQVDEHVSQAMALLHIEHLADRSPFD LSGGQQRLVAIAGVIACQPRILIMDEPTAGLDEAATTRVHNLIQTLHAQGITILIISHSQ AEIDVLADRTIALDADRNVGGKVRDAEPGSAVESAGSKNLHTLGSGHAKGDVRENRSFME RLDPRVKMVGALAVMFSAFAIRSFWQLLVAALLTGMIVATSGIGVKQLFKSIHMFLALFV FCGLLNVFFVQSGNVLTNIGPIPITDDGVRIAILYACRFVAVIIVGVVFLATTTPTAITD AFEALLKPFAKIGVHAQEIALVMSLALRFLPTLGSEAKAIADAQAARGGSIETGTFVQRI KAMVSIIIPVFAGAIRHADNLSLALDARCYEEGIARTHWRVMSIAKRDIAAGGVVVAYVA ALVLIAGLN >gi|222441570|gb|ABXX02000003.1| GENE 442 451752 - 452375 637 207 aa, chain - ## HITS:1 COG:TM1455 KEGG:ns NR:ns ## COG: TM1455 COG3601 # Protein_GI_number: 15644204 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Thermotoga maritima # 39 205 3 171 183 96 37.0 3e-20 MSVSSPNNTQNNDAEIASESMTRPDNAHSTGVADSGRWSTKRIAMYALFVALSMAVSFVE FPIVPGVEWLKYDPSGIVSLVAGFAYGPAAAVIVSVLGFLPHLFTNPWGTLMAVLVALAL SVPAALIYRRNKTRKGAVIGIIVGAIAALAMAIVGNIIVTPFYAHMTTAQVVALIVPALL PFNALKFTIHGVVTFLIYKPISNLLNR >gi|222441570|gb|ABXX02000003.1| GENE 443 452752 - 456099 2901 1115 aa, chain - ## HITS:1 COG:FN1160 KEGG:ns NR:ns ## COG: FN1160 COG0553 # Protein_GI_number: 19704495 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 520 1114 514 1086 1089 479 42.0 1e-134 MCKHVAAMLLLFLDQPERFRGFKRSGVTSHILSDYMRALDAKNDNTGQSAQLDVLKRIVD AKSRLADEQRGVITQGATKTKRKSGSIIVKPGSVRLEPTLIMNRELWSLTLKIGCGDASY IIKSISKFVADMHNGAYVSYGQKLSFTHTPDMLEPFSLQLFRFLQGVVGSRAAAQLQNNY YYAPDVRIEREIMLTDGELCDLLNLFEAEPQQDYIEDVLIARGPLEAPKHEGRERARQLT PDDFAHTDDAAPGYVEVATPGESRSHTIAIFDGNPQFRFIAEYVKEGASSGVRITSNRTI TDRIVGQRGVYLMSAEHNGTPTDSHMMPVSGLFRCTDSILPAVDALMTLCASNVSDGVFI AENDWPMFARTILPKLTEAGIGFDIPQEVAERMGVDCQIEFYLDRDLQGITCEAVARYGD FVFQLVPTAKALRGVINPDSRSKAALIKRDTARESFAVQVVRQLFPTWSSIDVARIREED EQTILLLLTEGVDILRSVGQVFSTAAFDGMMMPGSPTVKVGLSIDSNLVEISPIADEVPM NEVGALLNSYRRNRRYHRFKDGTFVDLKNADLHELDQIATDLDLDEQQLDSGRITIPGYR AFLLDAQVDDDGKSESFVDYVNDVKIIDPKRYEVPRNLKNVLRPYQVEGFQWLSTLWDKG FGGILADEMGLGKSVQLLSLVEARKGSGPALIVCPASLVYNWAAECEKFTQDLTIEVVAG TKAQRRKLIAAVAQQWKNPSESNDMQRTDVVITSYDLLRRDVDDYAACRFALMALDEAQY IKNHATKLAKAVKQITAEHRFALTGTPIENRLSELWSIFDFLMPGLLGTYTKFREKYEQP IMAPGSEHSVMADKLQALVGLFIKRRLKKDVLTDLPDKFENVLTVKLEGEQRKLYAAHEQ RLRATLTKTKDADFNTKKIRILAEFTLLREICCDPRLVYADAKNASAKLDAICELVSTCM DESKKVLVFSQFTSFLDLIGTRLAEQGVDFYTITGETPKKRRVELVDEFNGNDVPVFLIS LKAGNTGLNLVGASVVVHADPWWNAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERIL KLQEKKSELAQQFTDGTASGGVGTLSKDDLLDLLA >gi|222441570|gb|ABXX02000003.1| GENE 444 456059 - 456595 278 178 aa, chain - ## HITS:1 COG:no KEGG:BAD_0963 NR:ns ## KEGG: BAD_0963 # Name: not_defined # Def: helicase # Organism: B.adolescentis # Pathway: not_defined # 1 147 5 147 1279 215 80.0 8e-55 MRTIGVQLADTLSWLSDELRSECSQPVLQRARGIANQWRAKMSDLHCLNDSDSDRITLHA NMRGTTSPSSRYEVQATLDLSDELFLARYCSCPAFNGSQHGYGTYSSAYSPSYRNNPKYR SFDDDDDEYDYVDDYDDFGSGSTFGHVQDDDEFDSDPAGGAPLYGHVQACRRNAAAVS >gi|222441570|gb|ABXX02000003.1| GENE 445 456916 - 457641 713 241 aa, chain - ## HITS:1 COG:VCA0194 KEGG:ns NR:ns ## COG: VCA0194 COG1226 # Protein_GI_number: 15600964 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Vibrio cholerae # 3 240 10 251 280 99 29.0 6e-21 MTLNKWRRATEWFMTALALVFLFAYSWEVLARTHILLCEMVINIIWMVFIADCVVSILLA EDKKTWFKDNLLMLVSIALPVFRPLRLLRLVAVLNVLNRTGGMAVRGRITLYTCCSVTLL MYIGALAELDVERGVPGASITDFGEAIWWSFVTVTTVGYGDLSPVTWQGRCIAIGLMITG VALIGIVTATLASWIVDRVRDETDKRADEAESETEQLRHNVRELTDTVNQLRDDIAQLRR L >gi|222441570|gb|ABXX02000003.1| GENE 446 457697 - 458689 925 330 aa, chain - ## HITS:1 COG:L51032 KEGG:ns NR:ns ## COG: L51032 COG0111 # Protein_GI_number: 15673970 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Lactococcus lactis # 62 330 49 317 325 199 38.0 7e-51 MGIWNDRKLIVNCLPLTESERAQFIRAAKDIPQEFVGDSTQRGSMSWTAAVPEELKAKAT AVIGNIAPEECAQCPKLEWLQTWSAGVDKYQRPGILQPGSMLTNATGAYGQSVSEHMFAM MWAIMKNLHIYAASNPNAMWQDAGRAVSPNGKTALVIGTGDIGSHFARLCKNVGMTTIGI RRNPAVEAPGVDHIVGFESLDDVLQYADVIAMCVPSTSTTYHLLNAERIASLKPDAIIIN AGRGNAIESQALADALAEGRIRGAALDVTEPEPLPANSPLWCEPKCLITPHVAGGNHLEI TERSIISIALGNVRCYANGQSLDNRMPIKS >gi|222441570|gb|ABXX02000003.1| GENE 447 458743 - 459222 429 159 aa, chain - ## HITS:1 COG:L110564 KEGG:ns NR:ns ## COG: L110564 COG1490 # Protein_GI_number: 15672090 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Lactococcus lactis # 1 156 1 146 151 140 48.0 7e-34 MRIVLQKVGEGSVDVVDETSGEVDTTFEPQHIGIGYVLLAGVEDTDGAKQIDWLARKIAN LRVFEDENGKMNRSIHDVNGSVLSISQFTLYANVRKGNRPSFVKAGAPAHAEQTWHGFND ALRVQGLEVKEGRFGSHMRVRLANDGPATIIFDTDELGV >gi|222441570|gb|ABXX02000003.1| GENE 448 459240 - 459899 702 219 aa, chain - ## HITS:1 COG:no KEGG:BAD_0969 NR:ns ## KEGG: BAD_0969 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 10 219 14 223 223 413 99.0 1e-114 MGKNGTQPTTKNVTPAVTPWGKNRVKNTETGNHVLIMPGIGYTVDRPLLYWAAQALAANG WFVDRLDLKLTESVEFPEMIACMERVVDEWRKAALEHAAESGEEPHLLVVTKSLSTLSYP HSAKLGLRVVLLTPVLNPPPFDKHKSVIPAPLPGTAGSPMPLICAGDADPYYDDAKAHLL TDHVRTYAGANHSIEVPDDWQTSLDYLKQVTQAIVDYAG >gi|222441570|gb|ABXX02000003.1| GENE 449 459977 - 460108 145 43 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352253|ref|ZP_03743276.1| ## NR: gi|225352253|ref|ZP_03743276.1| hypothetical protein BIFPSEUDO_03869 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03869 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 43 1 43 43 82 100.0 1e-14 MLGGAGYNRFRQFTTHWLPNYGPTYYAAFVHDPEGNNIEAMLV >gi|222441570|gb|ABXX02000003.1| GENE 450 460177 - 460347 101 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCSNPGTYEFRLLLDFPQQSAVPTDTFSALREVHEYSAENGPCFHTAAEMFDSLGI >gi|222441570|gb|ABXX02000003.1| GENE 451 460371 - 460568 342 65 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0865 NR:ns ## KEGG: BBPR_0865 # Name: not_defined # Def: gp2 phage-like protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 65 1 65 65 96 95.0 3e-19 MKYGMRKPSWKKSLSARTKGRATRAVKRALIPGYGKKGMGWLYPKRKLYNTVYKKTTFSL FDLFK >gi|222441570|gb|ABXX02000003.1| GENE 452 460672 - 461493 446 273 aa, chain - ## HITS:1 COG:BH3996 KEGG:ns NR:ns ## COG: BH3996 COG3410 # Protein_GI_number: 15616558 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 59 269 15 181 188 94 29.0 2e-19 MWGDHYLLSRICLHRQFRIAADDATIRWIDDFADGKRIGRIPQDIGEKNRETGEYVREPF EIRVFDSPVELFKAIKEKAYLKASGVDGCGLSRVVATYDWEYKGGKINDSSPDGLWNVEL HRDAQGVWRMGAAQGMPRGYDAFNPDGRADYFCHPWNYEIKVGDKGLSLDAVWAESPHTL NEVGSTFSIQGFDLNYVGVIIGPSVTYREGKIVFNEKASCNKRAVSKRNGSISYAQSNLR NELNVLLKRGVHGLYLFAVDPELQAALKEAASK >gi|222441570|gb|ABXX02000003.1| GENE 453 461496 - 462401 468 301 aa, chain - ## HITS:1 COG:no KEGG:BAD_0974 NR:ns ## KEGG: BAD_0974 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 294 137 430 712 555 95.0 1e-156 MHYLLGSDAVKNLNNRRANAQGDYYTQDEFSQIFSDIWLELNRQDPELFPAEEIIRDSAL FKASPFHQLSDDQIAAEESIMDALSEALAGSGNSADSGLSRLIFVQGVAGTGKTVLLSHL FYRIATEMDINGRINDEDDEDILGTDSSPKISKEDRRKAYILVNHNQQMHVYNQIASKLG LQKHFGEVALKPSRFINRFSEKTASNRAIADKPRGKADVVLVDEAHLLLTQGDQGYSGKN MLHDLLRRAKVVIAVFDPNQILQTSQRWSEEDQDMLFPQQAESDVQKLLLAIAGSWSDLC H >gi|222441570|gb|ABXX02000003.1| GENE 454 462869 - 463192 229 107 aa, chain + ## HITS:1 COG:BH3997 KEGG:ns NR:ns ## COG: BH3997 COG1694 # Protein_GI_number: 15616559 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Bacillus halodurans # 5 95 6 98 101 93 55.0 7e-20 MISDSSINAIRKFVAERDWSQFHTPGNLAKSISIEAAELLECFQWNDEPQDSNIEHIHEE IADVLIYCIMLSDKLGFDLDEIILDKLAKNAQRYPAEFAYGNSNKAN >gi|222441570|gb|ABXX02000003.1| GENE 455 463792 - 463944 90 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140122|ref|ZP_07802315.1| ## NR: gi|313140122|ref|ZP_07802315.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] # 2 50 340 398 495 73 66.0 6e-12 MGGSILRVMQKVCDAGLPESKFLGCDTDLCINIYRNGSETVFDDGIVTGL >gi|222441570|gb|ABXX02000003.1| GENE 456 464084 - 464320 258 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352261|ref|ZP_03743284.1| ## NR: gi|225352261|ref|ZP_03743284.1| hypothetical protein BIFPSEUDO_03877 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03877 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 78 7 84 84 149 100.0 5e-35 MMISLICTRLWSPYYICDYPPRQELIEESYQYVLCDIHMGVWLKGVHWQDIYEIPSDAIC ELIVNASALQLQLFEHSD >gi|222441570|gb|ABXX02000003.1| GENE 457 464369 - 464707 60 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229817499|ref|ZP_04447781.1| ## NR: gi|229817499|ref|ZP_04447781.1| hypothetical protein BIFANG_02762 [Bifidobacterium angulatum DSM 20098] hypothetical protein BIFANG_02762 [Bifidobacterium angulatum DSM 20098] # 11 98 137 224 231 181 94.0 2e-44 MDRDVPILRNEVLKKHYLTGNTHLDFEDYDRFIANKATWHPELETISEGTARKLRSNLFK AMVEAHLFDKNSDTVVSFLPSPSLADILMKRPDSFGFFLCVNHPCEHEWGIA >gi|222441570|gb|ABXX02000003.1| GENE 458 464569 - 465108 387 179 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352263|ref|ZP_03743286.1| ## NR: gi|225352263|ref|ZP_03743286.1| hypothetical protein BIFPSEUDO_03879 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03879 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 179 1 179 179 319 100.0 6e-86 MAGSYGAETTQGERYRLSFTVGGLLSPQGRALAEMYLNRMGGGSTERSSQTKVSEKISEK VNEKSDKSADEEVGESIATIRQQAIEENVLAIRTDSANRRVVAETTRRLSALTVGELAYL AGPDSSTSDREALMWIAMCRYYAMKYLKSIILPAIRIWTLRIMIGSLRTRLHGIPSWKP >gi|222441570|gb|ABXX02000003.1| GENE 459 465333 - 465497 173 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352264|ref|ZP_03743287.1| ## NR: gi|225352264|ref|ZP_03743287.1| hypothetical protein BIFPSEUDO_03880 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03880 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 54 1 54 54 72 100.0 9e-12 MFGKVRKTRSDCTVGTYEKKHDLPTGTIRNKDGRKARKDKTLAALRKENGKDYR >gi|222441570|gb|ABXX02000003.1| GENE 460 466491 - 467552 572 353 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1797 NR:ns ## KEGG: CDR20291_1797 # Name: not_defined # Def: putative conjugative transposon DNA recombination protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 337 209 538 540 287 48.0 4e-76 MRSNFSANEKVQQINDKISEKVESLTRKTVTLGFEADTVSSWENGIVTKLENIPFSNVGD GTKSIITAELALSKSKDGQKDVILLEEPENHLSHTRLSMFLDDVKNRCKDIQLIVTTHSS FVANKLDLKNLILLNGDESTSFADLQKDTSRFFMKAPGYSTLRVLLCKASILVEGDADEL VVQRAYLDSYGRLPIQDGIDVISVRGVTFLRFLEIARKIEKDTVVITDNDGNVEALRSKY RDYPFINSPEATNAHQVISYDESYLTEGKAKKVNYNTLESEIYESAGAEKLAKILGRSNN NRDETLDYMEKHKTEVALKIFDATEKITYPNYIVKAIEWAASKVGAKKVGVGK >gi|222441570|gb|ABXX02000003.1| GENE 461 467561 - 467791 118 76 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01788 NR:ns ## KEGG: EUBELI_01788 # Name: not_defined # Def: DNA helicase II / ATP-dependent DNA helicase PcrA # Organism: E.eligens # Pathway: Nucleotide excision repair [PATH:eel03420]; Mismatch repair [PATH:eel03430] # 1 69 5 73 368 70 47.0 2e-11 MYLAAAGSGKTTFLLEKTSDKSKRYLYTTFTDENAENARDMLIKKYGCVPSNVTILPWFS FLLEHGGAPIPRCRWF >gi|222441570|gb|ABXX02000003.1| GENE 462 467736 - 468203 101 155 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAAVQGVSIYWTSTDQFPFLKKAFKCFALVFAASIGSISFLSLISTEDYIDIGIDEKFYE FVVVSSHILNFVNQDSIKYALQSIKYCSATLLITEQSEFRQLSRINCVGRVAVMSKGWLF IIITAFWLYLYAGKLHIFKTSGTLEWAHPHVLAES >gi|222441570|gb|ABXX02000003.1| GENE 463 468780 - 469301 81 173 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRPSPEPTLRRSVFSVVYLNRVNRDFAIFRELGFSEFHAEFHAGLVELTVQITHQRIDQS AARALSHILPTPIDALCLTPMVFVPLSVRWITCGQSAFAMSHVFSASATGFQQIEPASTL VIRQNVFAHSCALSCTFAHLRLDCIFCHSCGMFNCPLMYNTVHQCPSKATFTS >gi|222441570|gb|ABXX02000003.1| GENE 464 469493 - 469939 340 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352269|ref|ZP_03743292.1| ## NR: gi|225352269|ref|ZP_03743292.1| hypothetical protein BIFPSEUDO_03885 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03885 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 148 1 148 148 245 100.0 8e-64 MTRKGGFLKGIVASAATYAVKTAVDIAANPENMQKVAQLVSEQQVGSKLKQAAASMHLPA ALSPSARVAKKLDTIEETLEQYADQFPVNAPVERWKSTLQSLRLMDTMNRSTTGSEHKNR LEKLQTQTEALFNEIFQSLDSGDAQIED >gi|222441570|gb|ABXX02000003.1| GENE 465 470042 - 470734 638 230 aa, chain + ## HITS:1 COG:no KEGG:ML5_4837 NR:ns ## KEGG: ML5_4837 # Name: not_defined # Def: hypothetical protein # Organism: Micromonospora_L5 # Pathway: not_defined # 34 201 5 176 419 108 38.0 3e-22 MIDDDSNELIPFEGGDSDADASTGNNNPDDTKSVTIIQDEQGIVFLGDAGTIDLWLKDEG FDSKAFKAKAIQTVSSASKGAQAAGNAMVESGRWVKLTKESAELVAKYGKNCKKGPFQAG VVRQPNGRIIKHLKFTQPGQLNPAMLTGISGVMAQMALEQDVSEITDYLKEIDAKLDDLL RDQKDQTVSKLTGISQYSKESHALFHFGHAFRPSTSHRAARVPEQWQATC >gi|222441570|gb|ABXX02000003.1| GENE 466 470646 - 471401 682 251 aa, chain + ## HITS:1 COG:Cgl2281 KEGG:ns NR:ns ## COG: Cgl2281 COG4186 # Protein_GI_number: 19553531 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Corynebacterium glutamicum # 3 241 29 213 220 63 25.0 4e-10 MRYFTSDTHFGHPLVTALRGFLNNGKLRAEYLDIWQTQTRTTAHAWIKQYVHDNQTSFKA ICDIARHENTIIDNINEIVGHDDELWILGDLSYRCTVEHTLECLRRINCQHLHLIIGNHD RNFRLRFNDMLYEDVFETIDDYCEIDMELPVLDESGKITVATTQQSIAMSHFPRLSALAE EHGDWPSNWNEFADMAPTTEGWLLYGHTHQDVPDGTDPRSVNVGLDAWDFKPVSEQQILA WLVSRCADQSK >gi|222441570|gb|ABXX02000003.1| GENE 467 471343 - 471645 129 100 aa, chain - ## HITS:1 COG:no KEGG:BAD_0967 NR:ns ## KEGG: BAD_0967 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 78 26 102 330 130 76.0 2e-29 MRAAKGVPQEFVGDPAQRGNMARTAIIPEELKAQVTVIVGNVDPGTCRQCPKLEWLQTWS AGVDKYQRPGILQPGFMLRVEFILIGRHTGIQARRGSAVR >gi|222441570|gb|ABXX02000003.1| GENE 468 471827 - 472039 143 70 aa, chain - ## HITS:1 COG:no KEGG:BDP_1058 NR:ns ## KEGG: BDP_1058 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 31 69 96 134 135 71 89.0 9e-12 MVFGYFKHTFDDGHVLGLRLIILVAHGAVSGAAPGESFSHLAFMVPAGDPGAMSNEWLEP VDAQAYESLA >gi|222441570|gb|ABXX02000003.1| GENE 469 471962 - 472228 100 88 aa, chain + ## HITS:1 COG:no KEGG:BDP_1056 NR:ns ## KEGG: BDP_1056 # Name: not_defined # Def: aldo/keto reductase (EC:1.1.1.188) # Organism: B.dentium # Pathway: not_defined # 1 66 234 299 338 106 74.0 3e-22 MRNKYDQAQAQDMPIVERVLEVAEHHGVPMAQVALAWHWAKGVTAPIVGCLQPERVDDAI AALGVQHHELSSTRSKTYANIAGLLRTN >gi|222441570|gb|ABXX02000003.1| GENE 470 472164 - 472361 189 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSRRHVVKHMPTLQVSCAQTKPCNRFDSLLDKNASQPQGVLSHYYIAVYIQHHSSKNGR VAKVI >gi|222441570|gb|ABXX02000003.1| GENE 471 472571 - 473533 481 320 aa, chain - ## HITS:1 COG:no KEGG:Blon_0500 NR:ns ## KEGG: Blon_0500 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 310 75 382 386 291 45.0 2e-77 MICCLIPDDGGPSFLWGTWLALGYAGLRIESLWGMLYPFAVALVRMWRFNADGVAANEYF MLILVMFFAYFVGKTFAWKELAAQLKQNKLRYEKLSQHVEYLRKESVVASRIHDSVAGNL AYMAILLDGLILDAEKNKTFDEKEIREVRALVVETLDEMRSVVDLMNGGKTESVQADNMS LSGLQIVGEQGDSFLKELGFHGKTRIALKDLKNLDDAFSREVFSLIHELYTNIAVHGSPG GEYRLIVFWDDDDLIHVDQVNDISSKNLFPDKPVSGSGLSLHMKWIKSIGGFAKTSSEKG AWQFHARFPVIMSEDSAEPV >gi|222441570|gb|ABXX02000003.1| GENE 472 473508 - 473756 92 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVSTKRVNPFISWCVFHLQYLLVAVCVIMTIAEILFFPSAGVMTFFLVCVHVLAVVLMP RRPIICCNIIFFYFCDLLSYSR >gi|222441570|gb|ABXX02000003.1| GENE 473 473740 - 474411 611 223 aa, chain - ## HITS:1 COG:BS_yvqC KEGG:ns NR:ns ## COG: BS_yvqC COG2197 # Protein_GI_number: 16080361 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 7 213 2 202 211 79 29.0 7e-15 MYLGKRIRIAIVDNDRLTLGVMKMMIERILPQANVCWAVSDGLTAVSKSLNSRTRPDVLL VDMSLEGMSGCDVCRTIREETAQVDLVGMTAFSLDRYCVPALENGASCLVDKANVKGLCH VLCAIVNGRRADVKYASSESAQESHERLLTAKSGNVNYETFAKREREVMGLCSLGFTSKE IGIKLGIGEPTVKTYIRRVMKKLGAKNRTQAVIQWMEINEREY >gi|222441570|gb|ABXX02000003.1| GENE 474 474501 - 475661 435 386 aa, chain - ## HITS:1 COG:SP1344 KEGG:ns NR:ns ## COG: SP1344 COG0515 # Protein_GI_number: 15901198 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pneumoniae TIGR4 # 82 360 579 855 869 62 27.0 2e-09 MRLLYKGIVSGLDLRGEYPVKGDISMYGDEMSKYSIGSGFAGVSLALLKSSCLENSEWFY AIAREKYISVLRKLKDGMSFRAGLFNGTVGVAMAAYEVFSREECHKMLSYIGISHIDYLA GIDDYSLYSGLSGIGMALLSLGASRNSHEEKMLSYILSKVYERCDCGLTSQDMLSSKADF TLMKGWLGAGLFLWKASLCRKDDALRSRAESIFRLTLTHLANADNKERPMYYVDHLKNKP RTMPYLDCGTSGVALAFIEVYKDGNESMEFLNEEFLRRLSQGSDMVCTFNGGLFGGYVGL LPAAIALRDLGIDDELWERIIDGLNLYLMKNNGNIVFPGLYGYKCSMDLGTGSAGVLLAL SDSGRSGEWGSWMPVLENEDFSLFRV >gi|222441570|gb|ABXX02000003.1| GENE 475 476060 - 476182 81 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDALLGRIALILIGEGVKRSQPNWKVQLRKCMELDLRLEI >gi|222441570|gb|ABXX02000003.1| GENE 476 476227 - 477159 427 310 aa, chain - ## HITS:1 COG:SP1344 KEGG:ns NR:ns ## COG: SP1344 COG0515 # Protein_GI_number: 15901198 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pneumoniae TIGR4 # 45 305 37 296 869 135 33.0 9e-32 MVGYSADDYLRFSADKETIYYSEPVYACEDAYVLPTNDNSEQWGVRSDGHWTYVNCLMYS FPPQGWKIHITSTIYDAQNVLYDVAEYLFVKSISFKYLSSRTCFIQANGKYADRLESGKF ITIYPSSEHIFIQLLKDLKTIVCKYDDGPYILTDKQWQNSNVFFRYGALKPRFSNEKNVP VIVTPQGDLIPDKELPLYSLPSFVDEPIYVKENNYFIEYSNGKLTDYQIDSAVHFSNNGG VYLASRNGKKYILKEGRKNVGVSDRSCLDAFHRIKHEYQILRSLSPLSDVVNAVDCFDVW NHAFLVEVFF >gi|222441570|gb|ABXX02000003.1| GENE 477 477182 - 477931 198 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 12 233 2 228 245 80 27 8e-14 MENFAYNNVDYLELKSVSFGYNDNEVLHDVSMRLEKGGRYAIIGPSGSGKTTIINTITGL YSANSGAIAINESLLDGQHLEEWRRWFTVVSQDNLLFSTTIKENLFFGLDFVPSEKDINK CLKNACLDEIISVGDLEKSVGEQGMSLSGGQRQRLQIARACLRKAPILILDEATSNLDVK TERRVLDNLLRSHEYDISIVISHRLSTIIDSDVIFFIEDGYLLDQGDHRELIERCPAYRF FVQNQLLKD >gi|222441570|gb|ABXX02000003.1| GENE 478 477934 - 478821 82 295 aa, chain - ## HITS:1 COG:lin2888 KEGG:ns NR:ns ## COG: lin2888 COG1132 # Protein_GI_number: 16801948 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Listeria innocua # 1 295 29 322 575 103 24.0 3e-22 MILGVVCSIAGSTLSFFVPLLIKDFIDNKKFDLSLLYVFPFLFAAQFILCAIGGLLISTE ADLHVAELRIQAMDIIFEKDMLFFDNENSGEIASGIVYDISLVRNFVAASIPQFVSSVIN ILFSVVALTVINYRLSILVLIIFPAVMILAVPLGIFNNRNAMMLQERIGKLNTFTSEIVR SMRTVKLCNAERCMLLKFKKRVNEIKEVNLLNDKVYSFVTPVQNLISIFCTGVIVCYGVH LMDVHLLTYGSFVAYVMLFFQLVTPVGGLFTFYLSCQTIKGSLKRINRVIGSQEK >gi|222441570|gb|ABXX02000003.1| GENE 479 478844 - 479725 180 293 aa, chain - ## HITS:1 COG:Rv2969c KEGG:ns NR:ns ## COG: Rv2969c COG1651 # Protein_GI_number: 15610106 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Mycobacterium tuberculosis H37Rv # 72 235 68 220 255 65 26.0 2e-10 MDAVMKRLNEREKQTILGLFTVFIIIILLASAFIGLFMSRNSASDAKDIKKAYESLSEVK RKPTNATNDGGLLVQVGSKKDIPTVEFYLDPLCPACAQIDRTLNDDIGKMYTSGQIKLEI HPVIFLDKCSSDHYSARVSGSIAYISEKDPKHVVAFISEIFDEKFQPSEVDYVEMSDEKI IEQAIKAGISREIAKESLNGQYDEWIEKSNDYTILRSDLIAPGREGFATPLIRVNKRIWS MKDMALDDLSDAFVESLGLKPEEVGDEDVKPRIGSKGKLLKTNTKYLAEKSDA >gi|222441570|gb|ABXX02000003.1| GENE 480 480359 - 481072 525 237 aa, chain - ## HITS:1 COG:no KEGG:BAD_0983 NR:ns ## KEGG: BAD_0983 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 237 1 257 257 280 60.0 3e-74 MTSEMIMLRPMRRTDFPALEELVRQAWYVDDESDDNGNVPNDERGLRKYKLRKAIHLRNM HRLAAIDMHDFLSRTTEATVAERDGRVLGVVLGSLRSRVTTAQRIRHAITRNCLALPLLT SKDGRRGLADQIAILQADEMLKRDAGKSYQAEVTLFVVSPEARGMGVGRKLFNHMLDVFR DAGMNEYFLFTDTTCDYGFYDYRGLTRKAERTVRRDSFTQGGLEDGALSFFLYEGRC >gi|222441570|gb|ABXX02000003.1| GENE 481 481257 - 482006 962 249 aa, chain + ## HITS:1 COG:CAC0441 KEGG:ns NR:ns ## COG: CAC0441 COG1434 # Protein_GI_number: 15893732 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 249 1 255 259 114 30.0 2e-25 MATLVRRIAGALCIVLAAVCVCYAFAVRNTHSGTVFWIVWLAFAALFAVLGFGVLFQWWA MLPRLVRGVAIAVACVGLVAFGTVEGCIVSQMHAQGKSDLDYVVVLGAQVRKSGPSLVLR YRLDKAIEYLDENPNTICIVSGGKGPNEPFPEAQGMADYLKEHGIAEQRILEEPESKTTE ENIVNSKKLISDDNASVGVITNNFHMFRALQIADKYGLDNAQGIAAGSPPNMLVNNMVRE FFAEIKFLL >gi|222441570|gb|ABXX02000003.1| GENE 482 482008 - 482088 60 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGFHPSIYFVFGFGILKQGKTEIAET >gi|222441570|gb|ABXX02000003.1| GENE 483 482151 - 483512 1947 453 aa, chain - ## HITS:1 COG:ML1481 KEGG:ns NR:ns ## COG: ML1481 COG0544 # Protein_GI_number: 15827779 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Mycobacterium leprae # 1 452 1 466 469 248 37.0 2e-65 MKISVRNLEPTKVKLTVTVDPEEFNPYLDNARKEIAKQVNVPGFRKGHVPGKIIDQRIGF GAVAGEAVNNGVPELYSKALEEKGIRPMAQPEIDVQEVPESAKDETKLKFVATVERRPDI ELPEIDGMEIEVAKAEITDEDINNRLEALRQRFGTLVGVDRPAAKGDYANIDLTAEIDGE VVDSQEGVSYELGSETMLDGLDEALEGLSAGEETTFEGTLEAGEHEGEKAQVKVKVNSVK AEELPELDDDFASEASEFDTLDELKEDLKKAASQDAEGRQATAARDAFIAKLEEGLEIPV PKGVKAEMVEQQLKGVTADPANATKEQKAEAEETVEKELRDQMVLDVLAEKLDVKVSQSD VFNFLASIAQQYGMDPNAFIQAIMRNGQLGSAVQEVGRSKGLLAGMRAVTFKSEGETLDL SAFLGEAAEDEEAESVEAASAAAAVADELASEE >gi|222441570|gb|ABXX02000003.1| GENE 484 483565 - 484185 596 206 aa, chain - ## HITS:1 COG:Cgl1855 KEGG:ns NR:ns ## COG: Cgl1855 COG0349 # Protein_GI_number: 19553105 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Corynebacterium glutamicum # 1 194 220 389 403 68 29.0 1e-11 MKDRQALAVAKALWTKRDELAREYDISPTLLLADSTIIEVAERKPHNAAQFRAVRSINER VRIQAGAEQEKMFERYAPIQRKIKPSMWKRIIQQALDLPESEWPVIESGNPQNQEAQSIS APRATRVWRERYPERLATLDKARKMVAQIAEDTRTPADVIIKPQYLRNLCWTDEPQKRDV AQFLTEQGARAWQVALVAESVSRAIM >gi|222441570|gb|ABXX02000003.1| GENE 485 484130 - 484861 569 243 aa, chain - ## HITS:1 COG:ML1040 KEGG:ns NR:ns ## COG: ML1040 COG0349 # Protein_GI_number: 15827504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Mycobacterium leprae # 11 213 22 222 429 159 45.0 5e-39 MTDEPRLQAEPREGVPDVIDTLPAFREYCSALASSHGSLAADAERASGFRYGHDDWLVQF KRDGAGIGLLDPQALAAEGADWNDFNRAVGDAVWILHDSLQDLPGFNDLGLKPQRLFDTE IAARLLGMKRFGLAAVTEHYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETT MRAELQKQGKIEWAEEEFDYALREGTCATQGASHPMAAYFTYHRNHEGPPGPGRGESIMD QTR >gi|222441570|gb|ABXX02000003.1| GENE 486 484854 - 485486 417 210 aa, chain - ## HITS:1 COG:no KEGG:BAD_0990 NR:ns ## KEGG: BAD_0990 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 210 1 210 210 289 65.0 6e-77 MVDIYAFPQGTPNEARATGRGSCAYADPPEQMLTRPSGVPDKVWDAVLSVERMPRLPSVS YREIPVPCAMASFGIGVEMQCDEARSTGWIMVLYSHKYRNDWHSHWRCVAFAALPLSGGE GDCLIPSMYWDAMMDRVGSYDVEHVSGTVTVTKSTTFGTQSDAPETGCEIRVSWTPLDYA DGGLDAGAQVGAWARFLRSMTQSEEDYPVD >gi|222441570|gb|ABXX02000003.1| GENE 487 485476 - 485895 117 139 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTMIQGYGRVAGFAVFHSISPRVECEDFFAWRMLVQQLHEYSFFQSLRHFQTIDLPESL AGICVASRLVDGEAVRLELFHHTLFHCLGRPLLVFQRVGNVEHMPFWTAKLVESKHIDMF HCVAERLADLRHILNVFLG >gi|222441570|gb|ABXX02000003.1| GENE 488 485680 - 486561 1011 293 aa, chain - ## HITS:1 COG:VC1869 KEGG:ns NR:ns ## COG: VC1869 COG1180 # Protein_GI_number: 15641871 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Vibrio cholerae # 53 288 4 243 246 196 39.0 4e-50 MSENVHFRSTTRHMLRESQNYVNQTLMGGLSGFESPIGLDRRDRINALKSGDIGFVHSWD INTSVDGPGTRMTVFMSGCPLRCQYCQNPDTWKMRDGKPVYYEAMVKKIERYVDLFKATH GGITFSGGESMMQPAFVSRVFRAAKEMGVHTCLDTSGFLGASYTDDMLNDIDLCLLDVKS GDEETYKKVTGGILQPTIDFGQRLAKAGKKIWVRFVLVPGLTSSEENVENVAKICESFGD AVEHIDVLGFHQLGRPKWHMLNIPYPLEDQKGPSEAMKQRVVEQFQSHGFTVY >gi|222441570|gb|ABXX02000003.1| GENE 489 486681 - 489056 3207 791 aa, chain - ## HITS:1 COG:HI0180 KEGG:ns NR:ns ## COG: HI0180 COG1882 # Protein_GI_number: 16272145 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Haemophilus influenzae # 13 786 8 770 772 839 55.0 0 MAAVDATAVSPEELQAKAWEGFAEGNWQKDIDVRDFIQKNYTPYEGDESFLADATEKTKH LWQYLDDNYLAVERKQRVYDVDTHTPAGIDAFGAGYIDSPEVDNVVVGLQTDVPCKRAMM PNGGWRMVEQAIKEAGKEPDPEIKKIFTKYRKTHNDGVFGVYTKQIKVARHNKILTGLPD AYGRGRIIGDYRRVALYGVNTLIKFKQRDKDSVPYRNDFTEPEIEHWIRFREEHDEQIKA LKQLINLGNEYGLDLSRPAQTAQEAVQWTYMGYLASVKSQDGAAMSFGRVSTFFDVYFER DLKSGKITETDAQEIIDNLVMKLRIVRFLRTKDYDAIFSGDPYWATWSDAGFGDDGRTLV TKTSFRLLDTLTLEHLGPGPEPNITIFWDPKLPEAYKRFCAKISIDTSAIQYESDKEIRS HWGDDAAIACCVSPMRVGKQMQFFAARVNSAKALLYAINGGRDEMTGMQVIDKGVIEPIQ PESDGSLDYEKVKANYEKALEWLSETYVMALNIIHYMHDKYAYESIEMALHDKEVYRTLG CGMSGLSIAADSLSACKYAKVYPIYNKDAKTTPGHEDEYVEGADDDLIVGYRTEGEFPLY GNDDDRADEIAKWVVSTVMGQVKRLPVYRGAVPTQSILTITSNVEYGKATGAFPSGHKKG TPYAPGANPENGMDSHGMLPSMFSVGKIDYNDALDGISLTNTITPDGLGRDEDERIGNLV GILDAGNGHGLYHANINVLRKEQLEDAVEHPEKYPHLTVRVSGYAVNFVKLTKEQQLDVI SRTFHQGAVVD >gi|222441570|gb|ABXX02000003.1| GENE 490 489244 - 489438 257 64 aa, chain - ## HITS:1 COG:no KEGG:BAD_0993 NR:ns ## KEGG: BAD_0993 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 62 29 90 97 100 95.0 2e-20 MEKQWYFNTVTEQPELGMISPASHRMGPYKTREDALDAWKIVQERNIKWEEQDREWKRWS SDEK >gi|222441570|gb|ABXX02000003.1| GENE 491 489485 - 491182 1898 565 aa, chain - ## HITS:1 COG:mll0818_2 KEGG:ns NR:ns ## COG: mll0818_2 COG0171 # Protein_GI_number: 13470971 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Mesorhizobium loti # 259 565 2 297 299 268 47.0 2e-71 MTDIRFALAQIDTCVGDLDSNAGKIMRYVRRAAQQGAQVVVFPEMTLTGYPIEDLALRAT FRKAAWNKANWLATELAADGLGDLFVVVGTVGTDRETSKPRNRLVVLHDGVVWDGYDKHF LPNYGVFDEFRIFSPGNKSMVLDVNGARIGVAICEDIWQDGGPVAELAEQHIDLLLTMNG SPYEEGKTDTRLDLAVRRAAEVNAPMVYLNQVGGQDDLVFDGGSFVVDADGTLLERSPMF MEDLSFFDLDTTAERQKAGSIAAKPDPDEEVYTACVLGLKDYMAKNHFKGVCLGLSGGID SALVAAMAADAVGGANVYGISMPSMYSSDGSKDDAADLAKNIGAHYDIQPIEPLFVSFQK QLDLEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYSTIYGDAVGGYAPIK DLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNEQGLAGTPLPDGVMIPVNSIEKAPSAEL RPGQKDSDSLPEYELLDQVLAMYIEHAHGREDLLADGFDETTVDTVMRLVDRAEWKRRQY PLGPKVTALAFGRDRRLPITNAFRE >gi|222441570|gb|ABXX02000003.1| GENE 492 491260 - 492408 1082 382 aa, chain - ## HITS:1 COG:L182020 KEGG:ns NR:ns ## COG: L182020 COG1473 # Protein_GI_number: 15672938 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Lactococcus lactis # 10 381 9 378 379 301 42.0 2e-81 MSEHIEITPEIIEIRHYLHAHPERSFKEYETSAYIEKLLRAHDIEVLNNPLETGVVGLIR GEQPGPRIALRADIDGLPIQEDTGLPFSSVNDGVMHGCGHDLHMSYMLGAAFWLAKRRKR IKGSIKLLFQPAEELGLGAKAMVDAGLLADVSAAIGAHNNPNYAPGQIAVGPDPMMAGCV KFHVTLHAAGSHAGYPHKGTGPIEALATMILALQTIVSRNVSPFHPLVLSITELHGGHVW NVVPDKASFQGTVRYFHKSDGELVEKRFKQQVQSIAAGYGITTDIDWDDFQNPLVSDMEL SKIVADNVRDYAQLEPIHPSMAGEDFCDFMPVTMPVFAFIGSNGEKGCPDWHSPHFVGLD ESLQAGVEFYANAALTVLNELS >gi|222441570|gb|ABXX02000003.1| GENE 493 492541 - 493341 686 266 aa, chain + ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 6 266 3 256 256 127 32.0 2e-29 MSSDIKAAFFDIDGTLTSFVTHVVPRSTIDALHALQKKDVKVFICSGRAPSYMGVVLDTI PVEFDGIVGLNGQFCTTRDGLDYRHPIDLHDVEIITDWLQSHTDVVANYAESNYGYFNRI NAALERTWNSLGKTAPKIDICNPQQRIGNHRTFQISPYVDKATEAEIAGMCGNVRGVRWH PDFTDLIPADGGKAVGMQVVLEHFGWSRDNAIAFGDGGNDVDMLRFAGIGVAMGNATDEP KTVADYVTDSVDDAGISNALHHFEIL >gi|222441570|gb|ABXX02000003.1| GENE 494 493538 - 494383 1264 281 aa, chain + ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 4 281 2 260 260 249 51.0 4e-66 MRNKKLLGALLAVTTLATFGLAGCGDSGSNGSASKEDDKTITVAASPTPHAEILNKAVKS LVEKDGYKLEVKEFTDYVQPNTATEDGEVDANYFQHKPYLDNFNKEKGTHLVSVEGIHFE PFGLYPGKTKDLQNLQDGATVAVPNDATNEARALLLLQDAGLIKLKNPKDINATPKDVTS NPKNLKFKELEAAVVPTVIKDVDIAALNGNYAIQAGFDPTKDTLVTEKADGLAAKTYQNI LVVKEGNENTAKTKELKKALKSDEVRDYINKNYKGAVVPVF >gi|222441570|gb|ABXX02000003.1| GENE 495 494471 - 495289 336 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 21 223 20 222 223 134 36 8e-30 MTIQIDHLHKSYGSGAEAHEVLHDINLTIDSGEVFGILGSSGAGKSTLVRCINLLERPTS GKVRVDGEDITDAKGKELADVRAGIGMIFQNFSLFQQRTVLRNVTFPLELNHTPKNKREE RARYLLDLVGLADLADRYPSQLSGGQQQRVAIARALANNPSIMLCDEATSALDSTTTAQI LDLLRRINRELNVTLVIITHSLSVARNICDRVAMIDGGRIVEMGDTEELFSNPQSDILKT LITDAKVENHRHKHDSASSDEQTDSPTKEEVK >gi|222441570|gb|ABXX02000003.1| GENE 496 495291 - 495971 936 226 aa, chain + ## HITS:1 COG:VC0906 KEGG:ns NR:ns ## COG: VC0906 COG2011 # Protein_GI_number: 15640922 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Vibrio cholerae # 5 223 6 224 225 174 52.0 1e-43 MGQIISQFIADYGELLVEGVRDTIIMTAVATLLAYVIGLPVGVLLITSAKKGIRPNATLN TVLGWIVNIVRSVPFIILLVAIIPLTRLIVGTSLGVPGAIVPLVITAAPFVARVVEQSLA EVDGSLVEAAQSFGASNLQIVFKVLLFESLPSLVRGAALTFITLFGFSAMAGTVGAGGLG DIAIRYGYQRYQYDVMTVAVILCVILVQIVQTIGDVASDHIDHHER >gi|222441570|gb|ABXX02000003.1| GENE 497 496474 - 496884 306 136 aa, chain + ## HITS:1 COG:no KEGG:Blon_0973 NR:ns ## KEGG: Blon_0973 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 9 136 7 134 134 207 82.0 8e-53 MTGTLPKQHKAARIIEHIVLVLALVWAGGCTLIWTQIDMPHSIVNTTSSDGTCEVAIGEL GSPMFFGPSTITIKVSWDTDSNVIGAENVTEIKTDLHNDGKSLDSDNFTVTWHGNIPTVT THGEEQSDQSYTFNWK >gi|222441570|gb|ABXX02000003.1| GENE 498 496871 - 496975 62 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMVVMIFMLMPLWDLLGREDYSRRGAMSGVVISS >gi|222441570|gb|ABXX02000003.1| GENE 499 496962 - 497099 116 45 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1148 NR:ns ## KEGG: BLIF_1148 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 45 11 55 55 76 86.0 3e-13 MTTIIMRASDDNRGQLFLALFQGFQFLGNLPISLVFHEAPTGTQK >gi|222441570|gb|ABXX02000003.1| GENE 500 497388 - 498089 409 233 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1150 NR:ns ## KEGG: BLJ_1150 # Name: not_defined # Def: Abi family protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 233 85 317 317 451 95.0 1e-125 MFSAITRAEAALKAVCAHEFTRLHPDEVNPYLNPDYYDSRRRPSAVALIDKVFKRILELD GNPRNRGDYGGKAYIRHCMEDHNGQVPLWVLANHLSFGQTVWFFQVQSPAVRLAVAESFT GLYADTHDGPRRITIKRLDSIFNRLVFYRNLCAHDERCYCARYDGRANENVYQAIGDLGY LLDKDDYLELFGRFSALVARATSAMPSRRQAILSAMGVRERELADRAEIILRS >gi|222441570|gb|ABXX02000003.1| GENE 501 498189 - 498341 235 50 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1150 NR:ns ## KEGG: BLJ_1150 # Name: not_defined # Def: Abi family protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 50 1 50 317 99 98.0 5e-20 MSLRKPYRSVDEQLRILRSRGMAVDAGAGHVLRREGYYPIVNGYKDLFLD >gi|222441570|gb|ABXX02000003.1| GENE 502 498252 - 498650 131 132 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1149 NR:ns ## KEGG: BLJ_1149 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 116 265 381 398 183 82.0 2e-45 MTRTGIDSHATGAQNAQLFVHTPVGLAQRHEFDLPQSGDESTEATPHPRDGLSEPNEVQL ISLLQNSADPPRMQPSRTSSEMKPPYHYSKGTRRSIKATTRKTQTPPKRDDARLHETELR PVCWTLLIRIQP >gi|222441570|gb|ABXX02000003.1| GENE 503 498630 - 499235 473 201 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 185 20 207 216 168 44.0 6e-42 MRRMGLRCAIRSRNPWRRYSSYRGETGDHVHNLLERDFDSARPFSKLGTDVTEFKVAGGK AYLAPVYDMASKEIVAWDVSRSPDLGQQRRLLAGAEPILHSDMGWQYQHRWWRDELERLG IRQSMSRKGNCLDNAATEQVFGHLKDEFYRGREFDSYERFKRELDAYIIHWNTRRRQIRL EGHTPGGVPEHVPRGLGLYPN >gi|222441570|gb|ABXX02000003.1| GENE 504 499430 - 499891 289 153 aa, chain - ## HITS:1 COG:no KEGG:BDP_0120 NR:ns ## KEGG: BDP_0120 # Name: not_defined # Def: transposase # Organism: B.dentium # Pathway: not_defined # 32 152 70 190 191 176 82.0 2e-43 MSERTRLHYPTVYVVHTEDKNRYKSVPDYTVYVGETKVAAARDHVENGLTKAEVMAMHGI ASVAPLERWCREYRAGGPEALGPRPKGRPRGSESKPRPEPTREQELAEQVAYLKAKVAYL EKLRALRASKSRGASEAPSSDCSQGGDTGSTTS >gi|222441570|gb|ABXX02000003.1| GENE 505 500136 - 500357 157 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212715662|ref|ZP_03323790.1| ## NR: gi|212715662|ref|ZP_03323790.1| hypothetical protein BIFCAT_00562 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_00562 [Bifidobacterium catenulatum DSM 16992] # 33 73 1 41 41 72 90.0 9e-12 MITLCSLQCPNTPFIPEKEEHAIRQMGFRRQRMPEKARIAYLNQQAESAWFYLKATGVML RVWCLRAVFSLCI >gi|222441570|gb|ABXX02000003.1| GENE 506 500488 - 500898 124 136 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352304|ref|ZP_03743327.1| ## NR: gi|225352304|ref|ZP_03743327.1| hypothetical protein BIFPSEUDO_03920 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03920 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 136 4 139 139 249 99.0 5e-65 MFLYLCILGPSVFMISLGSNLVFSDANPRKIVKRGCTTLIAFLLLNIVRDGIPDVVVALT GHPSTLDTFGYDIFASDILGFAGFVFLFFALVKHFHIVSLATPLISLCMLTVNDLIPPLH NVHWTLRAEAACRTRF >gi|222441570|gb|ABXX02000003.1| GENE 507 501082 - 503751 3248 889 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352305|ref|ZP_03743328.1| ## NR: gi|225352305|ref|ZP_03743328.1| hypothetical protein BIFPSEUDO_03921 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03921 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 889 14 902 902 1657 100.0 0 MVNHHKMINAAIATLATCAMLLPVVGSANANESSNTTVLGAGYTATKISHPNAGLGEDDG IVNVLNGESIDDLTQGLPERGQNYSWASAGYGDWMYVGTCYSAMGSTLKYMANTMGTKYA SIKAALDVAFNGELFLDNGENHSLLLKINVKTGEVKIIVNAIGGEHAVNGYRAAVEFHDK LYFAAAAKGQPYLLEVDPNSGDATEIVYRSAAMTTGLKKGYTAGIRGLTVVNNQLIASMI TDNGATIVASSNPSAGQDSFATIATQTEGLYNYPACAVTDGVFGGCVWDMVGFKGNLYVT MVTGTAKNNKQSFALVRGTQDKETGKWTFKPLVGDPADGAKYEWGFGASRSGAANMVVYK GHLYIGGYNDPMNALEKAMQMDFSDLYKDLESPVNLWRMDVDEDGNENFEMLAGEANNKY FGDSKGTIDGNTMLSGLGDSDEQSRHLNQYVWRMQSYNGKLYVGTFDISDLAYPATQFAN GDILKRTPEEWKKQIEYIKIFFDSLKKNDQNGTSGTIDTDSQEASKPSESESQETTKPSD DDIMPLNEGEASESDQAAQAVEEAGKTDEVAADVATMQQLLEDMGADLNSKQTDVVSPDG VAPQAAETYTLDDRYQFLASLQRLLDLYNKNKQYLPEFITNELDKWLTEENLENFIDFVG VLSYLHYSNDETRGFDLIVSSDGTNFQTISRNGFGDNNNHGLRVFAVTDSGLAIGTANPY HGTQVWLLNDGEIKNAELTNGDAFDYDKYDSDKKSANANGLTVGINPNGNTVEDVQYDYQ SLTAGTDYTVADDGSIVLSSAFLNGRETGSTGSVVVFYNQGARVRFTVTIKDSTPNAPKK DDDKQNTKPAAHKKANTANTGSNVIGVVVVVAVLVVAAGALFVFKRKRS >gi|222441570|gb|ABXX02000003.1| GENE 508 503901 - 505280 979 459 aa, chain - ## HITS:1 COG:Cgl1936 KEGG:ns NR:ns ## COG: Cgl1936 COG0534 # Protein_GI_number: 19553186 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Corynebacterium glutamicum # 26 393 18 380 435 140 29.0 7e-33 MTTSTSQNTHETDTANNASCTTISTILTLAIPTFGQLIAEPAFVLIDTAIVGHIGGQALA GLSVGSTIVLTVVGLCVFLAYSTTSQVGRLLGAGKRREGLEAGVDGLWLAGIIGVVVSVA LFVIARPLCMAMGAQGSVLHNAVDYVRAVVFGIPGMLLVYAANGIFRGLQKVRITLVAAT LGAILNTLLDLLFILGFGWGVFGSGVATLISQWFMAVLLIVPAMLWTRAEGARLRPRLSG VLNSAGDGAVLFLRTLALRACLVANVVLATHMGVEVLAAYQVVNSSWNFVLNMLDAIGIA GQTLVAAQIGARQEDEAMRLTRIAGRAGLCGGTVIGIGLMIAGWCASPLFSQSIEIQHLL TVGMVVVGVTLPLAGWMWAVDGILIGAGDYRYLALTCTATAAIYVPCLAAIGWICDAMQA SSALRMALLWLAVNLLFVGLRAIFNGSRIGTSTWLHIAH >gi|222441570|gb|ABXX02000003.1| GENE 509 505623 - 505778 186 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352307|ref|ZP_03743330.1| ## NR: gi|225352307|ref|ZP_03743330.1| hypothetical protein BIFPSEUDO_03923 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03923 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 51 1 51 51 86 100.0 6e-16 MTTVIMRTTEGDMRMMLLLWDATLGNRSLKIVEIPVKTAPRALNNPDFPEK >gi|222441570|gb|ABXX02000003.1| GENE 510 505883 - 507226 899 447 aa, chain + ## HITS:1 COG:MT2735 KEGG:ns NR:ns ## COG: MT2735 COG0582 # Protein_GI_number: 15842199 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium tuberculosis CDC1551 # 4 396 16 378 386 104 28.0 4e-22 MANGDRKRRKWGCVVACKDADGRIVSWQARYQSPVNPRQRIYRRFGLEFQTEAYRWLDEE HALVIDHKKGIRRWTHPSARTMHGRVLFSSYATRFVADLRKKDGSELSGRSKRIQKAALD KLLPWFGETPMCDITEEFVNEWYAKACDEVRPSALEHAVWLLKRVMRAATERQPDGGPPL LSSNPCNLVTRKRPSKRREQAPMTRQEIDTLVEGFPEYYRLSIHLALLVGGLRIGEVCGL QLRDIDLDHRLLYVRHSVTQGPDDLGEYRLDETKTPESHRVVPIPAPVCRLIREHIDRFC PDRDPDTMLFHAVRHPERVLNPTTIQRQFRTARKRINREDVTFHSLRATHATMFMIQGGT LRETMDELGHVDVDVAVRCYQRVVPRHRRDVAERLALEYLPAGDPAGIKAQIAQKEEEID QLRQTVAGLRRRLEELEDDGDGRSQSG >gi|222441570|gb|ABXX02000003.1| GENE 511 507374 - 508141 511 255 aa, chain - ## HITS:1 COG:XF1657 KEGG:ns NR:ns ## COG: XF1657 COG2184 # Protein_GI_number: 15838258 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Xylella fastidiosa 9a5c # 6 174 9 176 203 124 42.0 1e-28 MARVFDPYLIPGTNVLRNLVGATDKDALAAAENDLCSARAAILRENLPPAEGTLEQLRRI HRFLFQDVYDWAGEIRTIDMGKGEGLPFQPLELFSIGVRYSEGVLRGDDLFKGLGHEEFV KRLSVSYNNFNILHPFREGNGRTQRIFWEIIAREAGWHFDWGLIDKRTNDQASIAGMQRN DLRPLEDMFRRIVKPLSEPLTMSNDLAHLGEYAQPANKAYDMSPAQRQHVCEHYSYQRAI VPPGQEKPKLRHRSR >gi|222441570|gb|ABXX02000003.1| GENE 512 508144 - 508335 161 63 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1159 NR:ns ## KEGG: BLJ_1159 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 63 1 63 63 88 96.0 8e-17 MFGTISESEMRRRTENVGLSVQSVRLEGGDVTRAFIRDAGEYARGSIGSAELLSRTRRRY GLE >gi|222441570|gb|ABXX02000003.1| GENE 513 508444 - 508680 92 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352311|ref|ZP_03743334.1| ## NR: gi|225352311|ref|ZP_03743334.1| hypothetical protein BIFPSEUDO_03927 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03927 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 78 1 78 78 89 100.0 8e-17 MPRMTRQARHRTVIAQKERQIGKLRDEVERLRKILLERDTGTGENRETVLPKNRNTERTT YRKTGIWKHWKTETRRNR >gi|222441570|gb|ABXX02000003.1| GENE 514 508772 - 509599 424 275 aa, chain + ## HITS:1 COG:no KEGG:Blon_0981 NR:ns ## KEGG: Blon_0981 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 275 1 298 298 473 82.0 1e-132 MVSLIYLGKENPISYKTVFGMDAFDRHDTDGGNQTADSASDIKVYPESASGCLINDLGKL LNMNPDFYRRRIRRIRPAAIAVGLSAICLIAIFLIPSESNPVFQNFFSALFGFFLGLASS AYEKFRKWAERVNQTMKDAEGSMPIWEAIYKNSIFYDECFITLPAARVSPTWAQRAWIKI RFPSLSRKWHKYFRNGMAEPGLQPLSNERKRRKRLHYLESLSRCVFMLEPYQATLDYLLD YSDKILGEKIRQDKILKGYLQPVEGIYIYQKNVGK >gi|222441570|gb|ABXX02000003.1| GENE 515 509658 - 510182 456 174 aa, chain - ## HITS:1 COG:pli0029 KEGG:ns NR:ns ## COG: pli0029 COG2189 # Protein_GI_number: 18450312 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Listeria innocua # 16 70 60 111 355 60 58.0 1e-09 MGKNKVVAYHPQVPYRVLERIPEKSVLDSHGSDCGNMVIHGDNLEALKALLPEYEGKVDC IYIDPPYNTGNVDELKDVDLMSEECPIRFIITVEALSEGLGLPVRLCPGNRREVVHELCG HLYFLLYDVVRVVIFNGSDGKHGLVLAAVDSSAPRQKLFDHLFGKGRTVMDSGG >gi|222441570|gb|ABXX02000003.1| GENE 516 510207 - 511181 936 324 aa, chain - ## HITS:1 COG:MA2133 KEGG:ns NR:ns ## COG: MA2133 COG3177 # Protein_GI_number: 20090976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 28 242 28 236 326 97 32.0 4e-20 MANPELSQRIQELPEELLGLERELGIVERLRRIDALKDRARALDPLDGVEGMALADYDRD WLVRYTYNSNAIEGSTLTLEDTSLVLEGEFVPSDSPARYVFAARGVADGMAYVREYAREG RRLDEELVRRVHEVTALDLQPFARGTFRPYGYLARITATRVKTADPLEIRDDLRALIDGL DASGAHPLLRAAGFHAMFENIHPFMDGNGRTGRQLLNFMLLKHGYRPVAIKYDAKRDYAR SLETWQVDGDPVAFCFVFLDCVEQEEHAFIELVEGLRRKPDAIRSKTDLLDRFGDTLRQN LARQDGDGKSAGIDHEGPGCHMSH >gi|222441570|gb|ABXX02000003.1| GENE 517 511258 - 511698 495 146 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1154 NR:ns ## KEGG: BLIF_1154 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 115 1 115 122 145 88.0 6e-34 MFGLYMLAIYLGVAIIAAGFVSLLVVVALAVGLVTHPIRTLALVFHKLAALAAGLALILA LIVWFWYDHSKPDFVPCFWGSIGVIVASILIRAFAEWILERPTRAERRAMKRAAAQETGR VTMRMPVSEEVAAAFESTRDGRRASL >gi|222441570|gb|ABXX02000003.1| GENE 518 511720 - 512133 492 137 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1155 NR:ns ## KEGG: BLIF_1155 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 137 1 137 137 169 89.0 3e-41 MTEEDWSETKAWMRATRERIGMTQHDAAVLANLTVDMVKKYESEKYRIQPSERMREMLEH YLAEHRRAVAAIVERHRGDERAVLSFSRVSDLPEGLPDWVRAEESVKRRAAAVREAAVLL EAEGVAVDYTYLSEETE >gi|222441570|gb|ABXX02000003.1| GENE 519 512264 - 512356 93 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSAQRVLIQQQMLDQQRKADADGNSPAQSE >gi|222441570|gb|ABXX02000003.1| GENE 520 512514 - 513638 911 374 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 5 314 375 653 709 121 30.0 3e-27 MQADKAALDELGDDERLVLTRVVRRMWEAVGDDYVHDVTNVVANIDPHWCEKHPDEGRLL PEGECRFTSRSDQPVSLGWHAIEHAVPQEDHGEEDEAADNIIPANLTDGVSIAPVPQGGA TLSEGKTKPPKPFTEATLLAAMEHASRWVEDKELKAALDDDESHSGGIGTPATRADVIEK LIRTGYVERKGKQLRSTEQGRSLIDVVAPKLKDVALTAGMERRLSEVEHGQTDAAEVETE FRDLAAGIPADAQAAVRQDHVQTRKRNTESFGPCPRCGKPVVKTGKVFQCSTNRREKQPD GTWKTTEGCGWSAWTTVAGKTITDTTMRGLLVGRKVSLEGFISRKGSRFDAALLIDKDKG IAFDFNDNKERKRK >gi|222441570|gb|ABXX02000003.1| GENE 521 513686 - 514735 754 349 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 316 5 316 709 223 39.0 4e-58 MRLIIAEKHSVGQAIAQAVGGHMEKHDGYVQVGDDLVTWAQGHLVDLAAPDEYKNHDWGK WSLDTLPIDPTPDWQWKVSRDKGADRQYKVVAGLMRRGDVDMLVDACDPDREGEAIFRRI VTHVGVSKPMRRLWVASLEEDAIRDALASMKDETEYQGLADSAMIRAKADWLIGMNASRA YSLVYNARFTVGRVQTPTLTMIVDRDRDITGYVARPYWKVVAPMGGWKLAGERLDRREDA ETLLRIVNSDDFAFSIFKADRKQQHDAPPRLYDLTGLQKDMSRLHGLTAARTLAALQSLY EKNWRRIRAPTRSTSRTTTWTRCVASPKATGSPPASSNRPRNLNGHISN >gi|222441570|gb|ABXX02000003.1| GENE 522 514755 - 515183 556 142 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1157 NR:ns ## KEGG: BLIF_1157 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 142 1 140 140 188 92.0 6e-47 MASDYVDDFLRDERESFKRKETAAKKFDSRLDNFRKSAQALRDAARQFEEAFPGMSRTMI ADKLAMTGTEKNIAFDAKGELVAAPGGRKTPPAEPEPETVAESDPETTGSDVQEADDEPA PKDAAEPDTSDDGRPAWASGNY >gi|222441570|gb|ABXX02000003.1| GENE 523 515611 - 515814 307 67 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1158 NR:ns ## KEGG: BLIF_1158 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 67 1 100 100 109 66.0 4e-23 MQMEPMELQHTVFETDGGRIDAMWSDVRLHAGDIITPDDLDPLLERNGWMLVIRDWWFTD EPFGRAE >gi|222441570|gb|ABXX02000003.1| GENE 524 515829 - 516170 450 113 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1159 NR:ns ## KEGG: BLIF_1159 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 113 1 113 113 164 97.0 9e-40 MKEKNRAEEWFRAKHDELAETARANLAAHDLEPGQEAYHLDSLHYATAEQMEAICPTGID FDRYATLANGSVGYDEADAHWADAGWWDEQARAMWDEVDDIPDDGLYWTSVED >gi|222441570|gb|ABXX02000003.1| GENE 525 516550 - 516837 309 95 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1160 NR:ns ## KEGG: BLIF_1160 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 95 1 95 95 185 100.0 5e-46 MEDNENKEADMPVISMFFGIIITMNADDHVPPHIHARYQGHEASFTFDGNLLKGDLPRKQ RKLVEAWVLLHAEELEADWELAFNLEHPFRIDPLR >gi|222441570|gb|ABXX02000003.1| GENE 526 516854 - 517102 351 82 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1161 NR:ns ## KEGG: BLIF_1161 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 82 1 82 82 162 98.0 5e-39 MTIDYSIKVTQCEPMPGYKLKVTCSDGATGIFDMSRYVDRGMFKPLKDPQTFDRVRLAFG VPSWPGDIDIAAERVRSDMQII >gi|222441570|gb|ABXX02000003.1| GENE 527 517350 - 517841 15 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352328|ref|ZP_03743351.1| ## NR: gi|225352328|ref|ZP_03743351.1| hypothetical protein BIFPSEUDO_03944 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03944 [Bifidobacterium pseudocatenulatum DSM 20438] # 100 163 1 64 64 122 98.0 1e-26 MCSFALAQWAIWLTFTPMRSISRAIGSGVRQRSDLGDVDASFGQHPARVGAERPVLRRVP GQLLIQIPHLLPLVLSERDSLADVPISACCPAHSAPLLEVRSWVFCDAARAVWRLRRLWG MGLPGKPIRIANRVIVATITSLATPISISLIGSDFARHDCGMP >gi|222441570|gb|ABXX02000003.1| GENE 528 517947 - 519572 1266 541 aa, chain + ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 21 297 19 317 402 77 24.0 9e-14 MAVVKLGRPVKSNLGGDNGAMAYIIKPAKTDGGRLVSSNYERTRTDHDALAEGMLDDNRR SPQGIRKNSRLAYHIKLSFSPKDPVTPEQVHELGVEFARRITGGEYKFVVATHTDRHHLH DHIMVCAASRYGQHLKAELPKDIIDQWRAVSDEICRREGLSVVFNPVVEEQTRKMRDGTT AEGDDGTSPARDPKYVDEASVRSANEPESTARKASGGEPLERRYGMSMEEIYAAAKGMGT KDRIRMLIDLTSSTAENFEDWRDMLDIRGVGVEVRGRHLTYTLKDTGFKVRDEKLGQAYD MTNIMAGLQSTPVIPITFNRRLVAKQTRKTVTVWLPGTHRRKKITFDAKRLVDDGGSTLR AFLPRDRDQIILDPSNRYAGKTPTTGLYQWFGEPTSRLEPQTTPERLPLRYGVSPAQQRY YQAQARRLDRLAGEAKALNAAIRWTRLAGGDSAKGLRLLRGKVRESHDELQAAVIALHDA IQRGDPDLVAETRGEMECREALCDRYEDELSAIEREIHTTRDREQTETEQREQQHKRGRS I >gi|222441570|gb|ABXX02000003.1| GENE 529 520700 - 523327 1922 875 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1165 NR:ns ## KEGG: BLIF_1165 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 579 1 575 647 872 83.0 0 MNQQEQATKSAAIFQDTINGTNDPTPWPVTMWASSGDTIWTAGTARTAGEDSVGMIYGPG DTIVHRNTIAGDTTRATESFAIRPADGQSPMDAMLAGIEQWNHRHPDRWDTVAEPGRYRM TDPTTGRPLPMGWSDSLAVAASAAGRLDPDLLQASLMQNAVEHEPRPCVFFLEDNGYDLM VFSWHRNQQGLFDAMTFKHLQYDDLSMQITTISHSEDMRESFPAKSMSDGELLTQSRVYR DEYQHWREQDGGSVAQGMTGRVMRSGLLKPGLEQKPLLNLNDGRRAPDWDEFTDQAAISI LQGRPVSPTPALPQQEQPAQSADPATETQTPAWTAAMAKQVWPNAWVANRLAHTYILRAK DGRDWPKMIVGLPRGTVIDGQDLTGWATDMFMSGKNQRQKNEGRAVNLRFKPDTPVELFT GRGTERRTMQVDPQTLVQTIIDAQKRNRDAEETLDTASVELADKTVEESWPQISRMQGRF TEYQRAGTYKPAVAMKWARRLVDRTAETDEGRWTSRQRRQAAGLLIQELAAAQETLAEPF AHEDEYRQKQAELERLTSKPDETRETEGRDQKTTQKERSENMPLTQENVRRLLEQDPDIT GITQGGNAMGNYLEARLTDGRAVQIDFHDNPAWKDTDRLAGRIEVSYANRPQAEWQYDDN DMADREHTVIDPSDPDAEGRLAKAVKAREDAGYLVTKVEEDPAILYERHRKASCLHASHI LERYDSPDPTAVGILHGIVSEVNAHDPENDIAAYLTYPSDKAVQLAGDGLTEADIAEKRE MGGWDPRTDPLMRINEQGDWTGVTQQQADQLVWDNRDEILARASYDSELSTWTLHQLDQL KEPQPAQSLDRDRPEPDREAPAQTESTTKRRGPRL >gi|222441570|gb|ABXX02000003.1| GENE 530 523402 - 523707 363 101 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1169 NR:ns ## KEGG: BLIF_1169 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 10 101 2 95 95 147 89.0 2e-34 MTTEANDQPEPVIWFEGTLIRDPQPHGGQDDWLLETLADADGPKITIHASGEDHSANIRD NAHKGSRLMVKGTAGDEGSGIDIEATSLAFDPSHDEPDGEQ >gi|222441570|gb|ABXX02000003.1| GENE 531 523704 - 524024 284 106 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1170 NR:ns ## KEGG: BLIF_1170 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 106 1 90 90 144 82.0 1e-33 MTRTTVSGIRPDKTGTGEWIDINSHVGRLMSTIMAGGRPFSIDADPAGMTIVTPLPPPAA GPDTEAAGGNDSKTGTDPDEGRITSRKTLYERFKTRLNENLNERKQ >gi|222441570|gb|ABXX02000003.1| GENE 532 524037 - 525872 2075 611 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 71 587 84 550 591 199 29.0 1e-50 MERIRGIAIKTLTILAGFWLADLAATRVQAGITAGESVERIMDDMTTMLQHPTALGFDRT SLLCGLGGACAVGLFHLYRWSTSQRNWRDGEEYGSARWSTSREMAPYTDNDTRQNLQMTA TEGLSLDAQATRRNLNTTVIGGSGSGKTATHVIPNILKGSMNYACTDPKGELYAKTSGKL KKMGYTVKQLDLVDLTSETKFNPMRYIDPDKPDVAIMRLVTNIMDNTNGSTPKEHQTDDF WTKSERSLLTALTAFVYYLPDDILKDCLNIDAGQTLNAVADMRDLLEASEQDETKESQVD AVARTATEIYEETRAEWNRDGADHDDPDLREAWRLAQGLKFAARQYRPFTQGAGETKKGI IISLGVRLAPLTVGPVREILSDDNLGIDRIGGYADEHKGGYKHPNGKTAIFLALPDEDPT FNFLAAIFYQCLFDSIIRRCRTYPGECLATPLHCFLDEFANVGRIPNFDKLIATIRSRKV SVSIILQTIAQLKTMYKDSWETIVGNCDSVLFLGGNEQSTTEWLSKLLGKETIDIRTTSD SKGVSGSHTTNYQRTGRELLTPDELAQLDNDKCIYSLRGLHPFLSRKAWPGTAIARPKST LRHSKEWKAAA >gi|222441570|gb|ABXX02000003.1| GENE 533 525899 - 527356 986 485 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1176 NR:ns ## KEGG: BLIF_1176 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 476 1 489 491 213 40.0 1e-53 MTRIDRKTGEPILSPKLTVDQLYAMANEPGWRPWMRLIAEHPHAWPELAEWWHTAQEQGF DTAGAAPLPPASMRGRRRVAIPSAPLPPEDEPGQEPVPASMESVDETRTAEPEQSHPDDS AEKALKDADGDFAALEQVAAPEPTTMSLPPISEPEPTETGKTERPGGLSAAVTYSADLDD LKVRRVFPAGKALVAIVMAASLIAVSWMGLQIKNRHVAAMRQEAHETAISACDSAEATRR TIQSDLDRTTAKASKLLKGTSRGQVADPKTLDALNRLLGAKTTTISGSCASDAATSDLDR TTASLHRTTKELKNRLTDLKAATKAVADSKLDKTVDDANALYKQTDGRVADDKTRETLLK AVKTRDADAIAKAVKEVNESKTAKEKADAEAKAKAEQEAAAAAAAAQQQAQASQSQSAPQ RQTPSYSGGSQSQSQGSSGSGSGTGRRPSSGGSSSSTNTGGASPGWSVPTPSDGGTGLPG SDPGL >gi|222441570|gb|ABXX02000003.1| GENE 534 527412 - 527951 293 179 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1178 NR:ns ## KEGG: BLIF_1178 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 179 1 179 179 320 98.0 2e-86 MEPKRNRIIAATGFAVALLILGGNVAVICAGNGTAEDTQSTVARPRTKTEPGQKTAGDEE TEPATPTEDDPCADLAPKALGVYMGDERGQLEGEYFTPDAAGLDIPASSIAPQPLPETEF TGFPVSMGRRVVTCAVSTGLEASWVLDYTLTDDGWRCAAVKGPLEGGYRVHEGKPEEQK >gi|222441570|gb|ABXX02000003.1| GENE 535 527966 - 529669 1201 567 aa, chain - ## HITS:1 COG:SPy2025 KEGG:ns NR:ns ## COG: SPy2025 COG3942 # Protein_GI_number: 15675802 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 455 555 428 526 541 91 46.0 3e-18 MSGTQAHHAGGTRARIGRAATGVVSSAAQFGADRTDIADSMGHTAAEMAGRAGIYGMSST MHGVGWTAGRARRVMNRGKRALRSGNGMRKAVGKPKVLSEAKPSEKIGKFTAKGKASRRI GKRIGAGLGKAGRGVKRMGSTGMGWMDKTGARLTAADDDFASKLGSATRDLSFKAARTGV RGVNSSAKFIWRRRRAPVKAVRSVKATGQAAMRAARAAANFARTSVSRAIAGAASISLPI MPVIAAMLAVLGVLLAAMGAFLGSSASESTVSGVPAEYEADVIRAGSICQVVTPGVIAAQ IDQESGWNPKAGSSAGAQGIAQFMPSTWASAGKDGDGDGKADIWNPHDAIWSQGNYMCGL ASQVETAKKSGKLTGDTLELTLAAYNAGLGSVLRYGMVPPFEETINYVRRIKELAATKYT ATGTAEGGTVGSLEPKLTVSGGIVSTAGITPDTRYPWGQCTWWAATRRADIGKPIPGWGN AATWAGSAASAGYTVDGSPSAGSVIVFQPGVLGASAGYGHVAMVEEVRGDGSILISESNV LGLGVVSTREISASQLAAAGSGVRYIH >gi|222441570|gb|ABXX02000003.1| GENE 536 529674 - 531209 1962 511 aa, chain - ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 47 480 123 593 617 104 23.0 5e-22 MDRGESMTLVRRKNAEVKMQVMDQRRKNRKQGLDPDDLPDDLADQQEQLGQLRDELRSTN QRLVDSIIVIGVSAASQEELEVACRNVKAKVNAQSCTAESLKFMQMEGLTAELPLGNNPL PMKRTLTTNSAAILIPFTTQEVFEPHGLFYGSNARSGNPILADRRSHMNSNGFVLGTSGG GKSFTVKQEIAGMFLNRDDEVIVIDPEREYLALAAAFGGQIIQISAGTGTRVNPMDIVLE DDSASDPVKDKTNNVVSMIGALIGGIDGLDPLQKGLVDQCVSNLYTRYRNQGGGVVQPTL QDLHDELQAGGDQVSRYLADALNPYITGSMSGFNGQTNVDLSNRFTVFDVSGLSGELRTF GMMVVIDQVWNRVIRNKANGRRTWLYVDEFHRFFSNQYAAAQFKDIYKRARKYGLGVTGI TQNVEEILDLQDAREMLSNSDFLMLLSQNSTDADALCELLTLSEEQRQYFTGVLPGQGLM KIGSAYVPFDGRIPAGGDLYRLYSTTFQEGK >gi|222441570|gb|ABXX02000003.1| GENE 537 531188 - 532066 874 292 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1183 NR:ns ## KEGG: BLIF_1183 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 286 1 283 794 526 92.0 1e-148 MFGKKKPQAAPAEGGAEARAKARRKKATRLPKGVKQLIGYDAMLRNGIASLGDGRWSATI LFQDINYQLSPESHQMEIIDRWAKLINSFEAGQSVQIASYTRSRGVREILADVMMDETGD SLDHYRLDYNRLAQGKLESVSRNTSTVKTLTVTVRESDEQAAVATLNALCNNLVSQMRSI DACKATRLDREHRLRLMAEVLRPGEEFRFDERRFEHQPGKPDTKDLVCPWSIDARNPIQL DIESLDSKYLHRTMWVSSLPPELSDQLVNDLTGLRARVDVSIHLAPWTAAKA >gi|222441570|gb|ABXX02000003.1| GENE 538 532070 - 532420 421 116 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1184 NR:ns ## KEGG: BLIF_1184 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 5 116 1 112 112 206 94.0 3e-52 MALQMPVYRELTTIESKVFMGMSWRQCLAAVILAVVCGGGYIGLWFGLGMDPNLAMYLIF PPGLPVAIWGWVRPKGLMPEKYLKYILRHYTQREVYLLDGPGRPYRTGAKPTIKER >gi|222441570|gb|ABXX02000003.1| GENE 539 532455 - 533300 1007 281 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1186 NR:ns ## KEGG: BLIF_1186 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 281 1 281 281 446 91.0 1e-124 MVDFIVGILNSIGSGVGDDLVADLLKTPAEYNAGMYQLSLTVARSAVKPIASTILAIMCV LELARVSTRADGDRELGVKLVAMAMFKLTLVFTAAQHSELMLQAIDEVGDGVLGGIHSAA LTTGASSGLGLGDSMRDAIDSAGWMGQIPCLILLLIPFLVSKGATIVVTVVILLRFVQIY MLTAFNPLPIAFIAQEETRQWGINYFKQYASLVFQCATLYLAILMYRTLVGGTLNPSKFK DGDSLSGWVMDNFIGLLLASVMLIGIVMAANSVAKKLFGGE >gi|222441570|gb|ABXX02000003.1| GENE 540 533315 - 533548 485 77 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1185 NR:ns ## KEGG: BLIF_1185 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 4 77 5 78 78 89 91.0 4e-17 MYGITIAADSGSVVTSALQLFSQFAIIGGGLWAVWGVITLAGGLKDQNGPATQSGVWQVV GGGLIIAAAALFSNIAL >gi|222441570|gb|ABXX02000003.1| GENE 541 533437 - 534312 467 291 aa, chain - ## HITS:1 COG:no KEGG:BDP_0965 NR:ns ## KEGG: BDP_0965 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 32 207 943 1119 1272 250 68.0 6e-65 MNGHDSIILAAGSNVVTSALDLFSQFAIIGGGLWAVYAARDLHKDGAVITAKGDKLAGSG FDSEKFGGDLFTLDYKDGTAVITATDAYRALVSADVEHENDWTAYIQCKRIKTAGRVENR FTEHFNDKGLESNVVWTRTPDMTPGLHLEKYDVKSGERLGDRDDVKQALKMDGDSLEIAF KITNTSKVDSSTGEGAWFRARDLKLTDGPTGERSAGPFPYHRPSLFGFVGNVQTGAFSTA IPWSCHPKQVERKTSCTESPSRQTAAASSPVRCSFSASSPSSAVACGPCGA >gi|222441570|gb|ABXX02000003.1| GENE 542 534520 - 535635 240 371 aa, chain + ## HITS:1 COG:AF0477 KEGG:ns NR:ns ## COG: AF0477 COG0464 # Protein_GI_number: 11498088 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Archaeoglobus fulgidus # 97 253 177 333 409 120 44.0 4e-27 MEQDSDIKDEIVQLVKFGLGGQLNDFRMYVSRLIRKYRVGDASFSKALESLLQSSDVPDM TPIRELGHASRRTGEAPILPVGQRSDVEKPFLPERIVKQVEGLLEERENASVLALNGLSP TSTAIFTGPPGVGKTMTARWIASQLGMPMYRLDLAETIGRHLGESGNNIKAAFSKVRVTP GILFLDEIDAIAKTRSDDSDIGEMKRVVTVLLQELDDRNPASLILAATNNMSLIDPAVWR RFELRIDFPMPDEKQIMNALESDFSASDSLGGVSAPWIEALGIVMKGAPFSEVRSVAMRI RKRCVLRRCPAEDAITEYIRENTEGLTHAQRISLAVALVETGAVTQRLASEMTGVSRQTI RRRTEKTNSKG >gi|222441570|gb|ABXX02000003.1| GENE 543 535639 - 537843 718 734 aa, chain + ## HITS:1 COG:FN2100 KEGG:ns NR:ns ## COG: FN2100 COG1404 # Protein_GI_number: 19705390 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Fusobacterium nucleatum # 256 612 13 372 416 71 23.0 6e-12 MGRHYLIGHGERLSEPIVLPRGGATPKDIYTYEESRARLQPELHSAIANLPDDPALAPND VHVLQMVLHPKYLAKSYHPSGLLRAAGLSLVGSKPVRITTADDPDKGARLSRTLLVAGHR QSLEHFDSLLQDPDVRCEEYAGIKDIVRIERIDNYAFDDKYHPAPSNDAWYELVLHELDE DLAPDNTQKFLELAERLGVNVEERMNFKANNLLYLPIRGPEEAVKRLAEYSSVRALRPMP RLGLSPISSVRSIREPVTLPEPPSTASQLGVAVLDGGLPPDNPISSWVDYIKANPDADDD ERFLEHGLGVCSALLFGSLKSGQQPLRTRITAVRVLDSETRSDDPIAMYKVLNNIENVLE SYPFHYVNLSLGPDLPIEDDDVSAWTSVLDQILSSKDMLLSVAVGNNGEGDAESGNNRIE SPGDAVNALGVGACDSEDVYWMRAPYSAVGPGRSPGIVKPDLVAFGGTEGNEFMVLGPGT SPAAVPVMGTSFAAPNALRQAVRIREICGPEITPLVAKTLLIHAAERRREDNMSEIGWGK VPSDATEIVTTEDGRALVIYKGSIRPGKIVRATIPVPPRLDHGDVKIRATFSFTCRVDPQ SPDSYTRSTLEVTFRPDANRIDEGKKTARTDSFFSRNRMGTSSLYPVEAERRSDQGKWET VLHSERQFKAARLAKPVFDIHYNAREEGGASLSVTDKLEYALAITISAPKIGNLHQLILD AYPQLISLDPLLGV >gi|222441570|gb|ABXX02000003.1| GENE 544 538165 - 538989 1016 274 aa, chain - ## HITS:1 COG:no KEGG:Blon_0524 NR:ns ## KEGG: Blon_0524 # Name: not_defined # Def: LPXTG-motif cell wall anchor domain protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 265 1195 1445 1480 258 55.0 2e-67 MSDDSHEAGWRAYIQCKRLAVTDRHENQFTEHYNDKTLESNVVWTRTPDMTPSIDVQKWD RKSGWPNGDRDNSKDALTVSGDTEIVFTITNTSKTDPDTKQGAVFRTKDIKLEDSTIVGD GEVVDLKYPADWDTKVLKPGESVEVTGTLKGVTKTHTDRAKVTGTPLTECPVDTSAPFGD GTSDDEYGSKPEAETESKSDDVVTIDGKDYCADTKVESATDDWNGYRKSLAQTGAGIALI ALAAVVVLSGGAALLIASRRREAKAPADTEGSEE >gi|222441570|gb|ABXX02000003.1| GENE 545 538926 - 542300 3812 1124 aa, chain - ## HITS:1 COG:no KEGG:Blon_0524 NR:ns ## KEGG: Blon_0524 # Name: not_defined # Def: LPXTG-motif cell wall anchor domain protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 12 1100 105 1187 1480 1251 61.0 0 GTGGSGAATQFWQYKDDASGSWGPATDINSVSSAMANAGVRMDDSAGKAAAALKDANDRC VDGFHQRHPGEGDGDCRVVAVGAVSGNGTTTSVWNGSGIYDQSVWKDNWNKYIAPGDYNY AGTRHYKTSTAFDDDPSTSVDKLMERYVSSTASIVIIALDKYQPVPPNYTLSVSTTHGQR TDLKVGSTDPISDILHASNNGSSIKESLNGTAIIHYEGQKNGYVAAKTVSKPITFANNGD TRLDNLATPADFGMNHWQEGQYWIDIQIAKQGRMNAAVDTADKDPAETWSVSAEPPSPPV KTIDEGVSADGMTNRTVITYGTGKGGYEMAFKDEITADGVDCTVDNYRLVDKSDNDRDVS GEFQIGWDKAANTVTAVRTADKGEMPLDHEIEFSFDITVSKPKDFRKVKDHATGKWNQEP EADAGSKEFDTWQPNPDKSWIFEQNGRWQAVIDPQETNKTGGDSHTYLDGSRLGSVVNGT IGKNLIQAPKKLVLTDDWTAADYIFDADTKNIRVYEAEAGTDRESSVSDIVNTGKDVTDQ FDITVQGTKATAAAKTSYLKGLKGLKNPKQVTLLIPGKINFADGKGAEQVRKDYGKAAGD ELTFCAAPTGKNLTNSGSETVNNHTEPTNEPQICGYIPPVKKDVVSEASQGGDQESVDGK VVQPGQKVEYQLNTQPQLPADLAYEVKSVSFTDSYDAYLKPDKQTLEMMDLDTGKPVSKK KYTTTWDDSKHMFTLTVTDQETISQWRAGTSPRLQVRFEGTVADDAPTDHKVGNKWVLTL NNSITPSNEVFNIPPKLDPVKKDTQKDPTISIDGKTALLGDEIYYRVDIDARQDNQAYKV WRLGMTDDYDDEYLKLDATNVEITDETGKDVTSKFNIQDKDGVLYAYAKLVDTEIPATGE TVKGDPQPEDLKAYSESDEHDPLTQPAIDQTLLGHTYTVTMPMTVIKVTDGYTVKNKATQ VLNKIRKDTNEVTNPLKPINPAKDVTVKVGGASANGKSIYKGRSFLYQLDSSILPANRAY PQVDKWDIVDSLDPAFDEYTGQWAVYATRDLLSGGEVLASKGDRIAGSGFDSSKLGGDLF TLSAATVDGRNVVTIEATDRYRASCPTTPMRPAGAPTSSASASP Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:29:42 2011 Seq name: gi|222441569|gb|ABXX02000004.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont3.1, whole genome shotgun sequence Length of sequence - 176662 bp Number of predicted genes - 140, with homology - 129 Number of transcription units - 82, operones - 28 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Tu 1 . + CDS 678 - 854 98 ## + Term 862 - 909 5.5 - Term 845 - 900 17.2 3 3 Tu 1 . - CDS 949 - 3843 4383 ## COG1472 Beta-glucosidase-related glycosidases - Prom 3906 - 3965 2.9 + Prom 4040 - 4099 3.5 4 4 Op 1 . + CDS 4275 - 6308 1639 ## COG0515 Serine/threonine protein kinase + Prom 6334 - 6393 1.9 5 4 Op 2 . + CDS 6496 - 7479 1359 ## COG1651 Protein-disulfide isomerase + Term 7655 - 7725 31.6 + TRNA 7633 - 7709 77.6 # Thr TGT 0 0 6 5 Op 1 4/0.000 + CDS 7983 - 9473 1338 ## COG3583 Uncharacterized protein conserved in bacteria 7 5 Op 2 6/0.000 + CDS 9547 - 10476 1094 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 8 5 Op 3 . + CDS 10473 - 11381 821 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 9 5 Op 4 . + CDS 11425 - 12048 853 ## BDP_2265 hypothetical protein + Term 12049 - 12084 1.2 - Term 12167 - 12200 -0.6 10 6 Tu 1 . - CDS 12286 - 13749 1523 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 11 7 Op 1 . + CDS 13793 - 14443 477 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 12 7 Op 2 . + CDS 14482 - 16569 1876 ## BAD_1620 hypothetical protein 13 7 Op 3 . + CDS 16566 - 18281 1748 ## COG0728 Uncharacterized membrane protein, putative virulence factor 14 7 Op 4 . + CDS 18323 - 20347 1704 ## BAD_1622 hypothetical protein + Term 20386 - 20459 25.8 + Prom 20398 - 20457 2.7 15 8 Tu 1 . + CDS 20580 - 20819 134 ## BBMN68_1280 aaa+ superfamily atpase - Term 21003 - 21068 8.9 16 9 Tu 1 . - CDS 21093 - 21728 690 ## BDP_1244 hypothetical protein - Prom 21916 - 21975 2.8 17 10 Tu 1 . + CDS 22312 - 22434 259 ## gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 + Term 22477 - 22518 13.4 + Prom 22595 - 22654 2.3 18 11 Tu 1 . + CDS 22676 - 23659 735 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 19 12 Op 1 25/0.000 - CDS 23816 - 25171 956 ## COG1475 Predicted transcriptional regulators 20 12 Op 2 15/0.000 - CDS 25174 - 26154 981 ## COG1192 ATPases involved in chromosome partitioning - Prom 26214 - 26273 2.3 21 12 Op 3 3/0.000 - CDS 26397 - 27191 761 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division - Prom 27306 - 27365 3.8 - Term 27304 - 27349 5.1 22 12 Op 4 16/0.000 - CDS 27368 - 27895 893 ## COG1847 Predicted RNA-binding protein - Prom 27942 - 28001 5.2 - Term 27983 - 28031 16.4 23 12 Op 5 . - CDS 28038 - 29072 1306 ## COG0706 Preprotein translocase subunit YidC - Term 29236 - 29266 2.5 24 13 Op 1 . - CDS 29404 - 29766 177 ## BAD_1630 ribonuclease P protein component 25 13 Op 2 . - CDS 29784 - 29966 302 ## PROTEIN SUPPORTED gi|119026649|ref|YP_910494.1| 50S ribosomal protein L34 - Prom 30115 - 30174 3.7 + Prom 30069 - 30128 3.0 26 14 Tu 1 . + CDS 30198 - 31712 1962 ## COG0593 ATPase involved in DNA replication initiation + Term 31754 - 31790 -0.8 + Prom 32187 - 32246 3.6 27 15 Op 1 18/0.000 + CDS 32274 - 33398 1356 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) + Term 33443 - 33488 9.3 + Prom 33435 - 33494 4.5 28 15 Op 2 5/0.000 + CDS 33537 - 34796 896 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 29 15 Op 3 5/0.000 + CDS 34796 - 35281 370 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives + Term 35356 - 35386 1.1 + Prom 35414 - 35473 3.8 30 15 Op 4 24/0.000 + CDS 35575 - 37674 2933 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 31 15 Op 5 . + CDS 37728 - 40442 3646 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 32 15 Op 6 . + CDS 40518 - 41054 827 ## BDP_0007 hypothetical protein + Term 41169 - 41229 22.1 - Term 41578 - 41624 14.1 33 16 Tu 1 . - CDS 41677 - 43023 2066 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Prom 42976 - 43035 2.7 34 17 Tu 1 . + CDS 43265 - 43768 593 ## COG1970 Large-conductance mechanosensitive channel + Term 43803 - 43856 3.2 - Term 43703 - 43748 4.3 35 18 Tu 1 . - CDS 43859 - 44218 151 ## - Prom 44464 - 44523 3.9 - TRNA 44177 - 44249 80.6 # Ala GGC 0 0 - TRNA 44251 - 44323 89.3 # Ala TGC 0 0 - TRNA 44363 - 44436 89.9 # Ile GAT 0 0 36 19 Tu 1 . + CDS 44539 - 45315 507 ## COG1451 Predicted metal-dependent hydrolase + Prom 45510 - 45569 4.2 37 20 Tu 1 . + CDS 45634 - 46617 1063 ## COG0039 Malate/lactate dehydrogenases + Term 46669 - 46720 4.6 38 21 Tu 1 . - CDS 46747 - 48069 1466 ## COG1253 Hemolysins and related proteins containing CBS domains 39 22 Tu 1 . + CDS 48050 - 48145 57 ## + Term 48287 - 48328 -0.7 40 23 Tu 1 . - CDS 48219 - 48914 622 ## COG0288 Carbonic anhydrase - Prom 49143 - 49202 3.1 41 24 Tu 1 . + CDS 49000 - 49176 187 ## gi|225352394|ref|ZP_03743417.1| hypothetical protein BIFPSEUDO_04014 - Term 49175 - 49218 8.3 42 25 Op 1 . - CDS 49299 - 49499 93 ## 43 25 Op 2 . - CDS 49508 - 50497 625 ## BAD_0015 SSU ribosomal protein S8P - Prom 50547 - 50606 5.1 44 26 Tu 1 . - CDS 51199 - 53955 3641 ## COG2352 Phosphoenolpyruvate carboxylase 45 27 Tu 1 . + CDS 54215 - 56056 1590 ## BAD_0025 hypothetical protein + Term 56092 - 56147 11.0 + Prom 56070 - 56129 4.9 46 28 Tu 1 . + CDS 56234 - 57862 2113 ## COG0591 Na+/proline symporter + Term 57902 - 57942 9.6 - Term 57883 - 57937 16.2 47 29 Tu 1 . - CDS 57983 - 59083 1696 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 59105 - 59164 4.1 + Prom 59069 - 59128 1.5 48 30 Tu 1 . + CDS 59211 - 59591 421 ## BAD_0028 hypothetical protein + Term 59617 - 59670 15.1 - Term 59452 - 59482 -0.7 49 31 Tu 1 . - CDS 59703 - 60140 452 ## BDP_0028 hypothetical protein - Prom 60357 - 60416 5.8 + Prom 60316 - 60375 4.0 50 32 Tu 1 . + CDS 60495 - 62939 3577 ## COG0058 Glucan phosphorylase + Term 63030 - 63072 -0.9 - Term 63150 - 63186 7.0 51 33 Tu 1 . - CDS 63203 - 63424 410 ## BBIF_0127 hypothetical protein + Prom 63516 - 63575 2.0 52 34 Tu 1 . + CDS 63611 - 64405 691 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Prom 64532 - 64591 1.9 53 35 Tu 1 . + CDS 64784 - 66199 1451 ## BDP_0033 putative N6-adenine-specific methylase - Term 66336 - 66378 5.2 54 36 Tu 1 . - CDS 66408 - 66902 761 ## BAD_0034 putative septation inhibitor protein - Prom 66922 - 66981 2.7 + Prom 66892 - 66951 2.8 55 37 Op 1 . + CDS 67019 - 67822 939 ## COG3879 Uncharacterized protein conserved in bacteria 56 37 Op 2 . + CDS 67826 - 68917 1119 ## COG3764 Sortase (surface protein transpeptidase) 57 37 Op 3 . + CDS 68930 - 69163 64 ## gi|225352412|ref|ZP_03743435.1| hypothetical protein BIFPSEUDO_04032 58 37 Op 4 . + CDS 69163 - 69807 894 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 59 37 Op 5 . + CDS 69844 - 69999 72 ## - Term 69936 - 69995 8.4 60 38 Op 1 7/0.000 - CDS 70019 - 72106 2560 ## COG0515 Serine/threonine protein kinase 61 38 Op 2 4/0.000 - CDS 72103 - 73047 916 ## COG0515 Serine/threonine protein kinase 62 38 Op 3 19/0.000 - CDS 73044 - 74510 1778 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 63 38 Op 4 4/0.000 - CDS 74507 - 76030 1600 ## COG0772 Bacterial cell division membrane protein 64 38 Op 5 7/0.000 - CDS 76027 - 77598 1782 ## COG0631 Serine/threonine protein phosphatase 65 38 Op 6 . - CDS 77637 - 78152 411 ## COG1716 FOG: FHA domain 66 38 Op 7 . - CDS 78180 - 78887 932 ## BAD_0044 hypothetical protein - Prom 79009 - 79068 1.7 + Prom 78943 - 79002 2.1 67 39 Tu 1 . + CDS 79096 - 81498 2392 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases + Term 81615 - 81651 -1.0 - Term 81660 - 81719 5.1 68 40 Op 1 . - CDS 81788 - 83065 893 ## BAD_0046 hypothetical protein 69 40 Op 2 . - CDS 83055 - 83711 459 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 70 40 Op 3 . - CDS 83719 - 83952 137 ## gi|225352425|ref|ZP_03743448.1| hypothetical protein BIFPSEUDO_04045 - Prom 84139 - 84198 1.6 71 41 Op 1 2/0.000 + CDS 84025 - 85095 797 ## COG2267 Lysophospholipase + Prom 85097 - 85156 1.9 72 41 Op 2 . + CDS 85194 - 86177 1288 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 86182 - 86215 4.7 73 42 Tu 1 . - CDS 86261 - 86482 218 ## BDP_0054 hypothetical protein - Prom 86671 - 86730 2.0 - TRNA 86580 - 86665 58.6 # Leu CAG 0 0 - Term 87032 - 87072 5.0 74 43 Tu 1 . - CDS 87131 - 88498 1289 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase - Prom 88537 - 88596 2.1 + Prom 88510 - 88569 1.9 75 44 Tu 1 . + CDS 88773 - 90758 2320 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 90967 - 91018 18.3 + Prom 90992 - 91051 2.8 76 45 Tu 1 . + CDS 91138 - 93672 2301 ## COG2217 Cation transport ATPase - Term 93435 - 93477 2.2 77 46 Tu 1 1/0.067 - CDS 93715 - 94725 818 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 78 47 Op 1 . - CDS 94946 - 96445 1796 ## COG1113 Gamma-aminobutyrate permease and related permeases 79 47 Op 2 . - CDS 96438 - 96545 85 ## - Prom 96601 - 96660 1.8 80 48 Tu 1 . + CDS 96931 - 98385 2127 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 98393 - 98434 2.3 81 49 Tu 1 . + CDS 98579 - 99679 933 ## COG0501 Zn-dependent protease with chaperone function + Term 99861 - 99906 4.9 + TRNA 99784 - 99857 69.2 # Gly CCC 0 0 + Prom 99784 - 99843 76.8 82 50 Op 1 2/0.000 + CDS 100089 - 100592 333 ## COG1396 Predicted transcriptional regulators 83 50 Op 2 . + CDS 100589 - 101545 763 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 101565 - 101615 4.6 - Term 101634 - 101680 4.5 84 51 Op 1 1/0.067 - CDS 101688 - 104018 2410 ## COG1511 Predicted membrane protein 85 51 Op 2 . - CDS 104015 - 106798 3032 ## COG1511 Predicted membrane protein - Prom 106889 - 106948 2.5 86 52 Tu 1 . + CDS 107020 - 108174 1309 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 108213 - 108246 1.6 87 53 Op 1 . + CDS 108385 - 109671 1717 ## COG0104 Adenylosuccinate synthase 88 53 Op 2 . + CDS 109764 - 111278 1351 ## COG0038 Chloride channel protein EriC 89 54 Tu 1 . - CDS 111194 - 111592 136 ## + Prom 111312 - 111371 2.4 90 55 Op 1 . + CDS 111465 - 112559 813 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 91 55 Op 2 . + CDS 112559 - 112954 343 ## BL0547 hypothetical protein + Prom 113474 - 113533 5.2 92 56 Op 1 3/0.000 + CDS 113599 - 114684 1160 ## COG1609 Transcriptional regulators 93 56 Op 2 . + CDS 114948 - 116462 2069 ## COG0366 Glycosidases + Term 116515 - 116571 7.1 + Prom 116513 - 116572 1.9 94 56 Op 3 . + CDS 116651 - 117307 852 ## BDP_0110 hypothetical protein + Term 117319 - 117378 18.4 95 57 Tu 1 . - CDS 117627 - 119504 1568 ## COG0366 Glycosidases - Prom 119579 - 119638 5.2 + Prom 119538 - 119597 4.0 96 58 Op 1 35/0.000 + CDS 119844 - 121130 2007 ## COG1653 ABC-type sugar transport system, periplasmic component 97 58 Op 2 38/0.000 + CDS 121204 - 122094 1080 ## COG1175 ABC-type sugar transport systems, permease components 98 58 Op 3 2/0.000 + CDS 122094 - 122951 1158 ## COG0395 ABC-type sugar transport system, permease component + Term 123001 - 123045 9.2 + Prom 123152 - 123211 2.3 99 58 Op 4 . + CDS 123283 - 124884 1726 ## COG0477 Permeases of the major facilitator superfamily + Term 124933 - 124991 4.4 100 59 Tu 1 . + CDS 125337 - 126686 2031 ## COG0477 Permeases of the major facilitator superfamily + Prom 126708 - 126767 2.6 101 60 Tu 1 . + CDS 126995 - 128047 1567 ## COG0059 Ketol-acid reductoisomerase + Term 128118 - 128157 7.4 - Term 128092 - 128133 3.0 102 61 Tu 1 . - CDS 128251 - 128496 126 ## gi|225352466|ref|ZP_03743489.1| hypothetical protein BIFPSEUDO_04088 + Prom 128129 - 128188 2.5 103 62 Op 1 . + CDS 128404 - 129444 1418 ## COG0059 Ketol-acid reductoisomerase + Term 129481 - 129520 8.0 + Prom 129489 - 129548 2.2 104 62 Op 2 . + CDS 129586 - 131403 1877 ## BDP_0122 sialic acidspecific 9-O-acetylesterase (EC:3.1.1.53) + Term 131466 - 131518 11.5 + Prom 131569 - 131628 3.7 105 63 Tu 1 . + CDS 131787 - 132065 456 ## BDP_0128 mannosidase (EC:3.2.1.152) + Term 132201 - 132239 -0.7 + Prom 132110 - 132169 2.2 106 64 Tu 1 . + CDS 132294 - 133328 1154 ## COG1609 Transcriptional regulators 107 65 Op 1 . - CDS 133359 - 133625 188 ## gi|225352470|ref|ZP_03743493.1| hypothetical protein BIFPSEUDO_04092 108 65 Op 2 . - CDS 133641 - 135110 2002 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 135237 - 135296 2.2 + Prom 135254 - 135313 3.8 109 66 Tu 1 . + CDS 135363 - 138380 3114 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 110 67 Op 1 . - CDS 138552 - 140048 1425 ## COG0475 Kef-type K+ transport systems, membrane components 111 67 Op 2 . - CDS 140053 - 140235 87 ## - Prom 140316 - 140375 2.4 + Prom 140140 - 140199 5.5 112 68 Op 1 . + CDS 140342 - 140803 444 ## BDP_0141 hypothetical protein 113 68 Op 2 . + CDS 140821 - 141993 838 ## COG3764 Sortase (surface protein transpeptidase) + Term 142007 - 142034 -0.8 114 69 Op 1 . + CDS 142245 - 144671 2201 ## BBPR_0282 cell surface protein 115 69 Op 2 . + CDS 144821 - 146356 2102 ## BBIF_0302 hypothetical protein with Cna B-type domain + Term 146393 - 146455 18.0 + Prom 146590 - 146649 2.2 116 70 Tu 1 . + CDS 146682 - 147188 479 ## BDP_0145 hypothetical protein + Term 147216 - 147283 0.7 117 71 Tu 1 . + CDS 147579 - 149093 1796 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 149125 - 149181 13.5 - Term 149111 - 149169 10.1 118 72 Op 1 5/0.000 - CDS 149221 - 150135 1242 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 119 72 Op 2 . - CDS 150219 - 150932 708 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 120 73 Tu 1 . - CDS 151060 - 151254 413 ## BDP_0149 thiamine biosynthesis protein ThiS 121 74 Tu 1 . + CDS 151663 - 152730 866 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Prom 152854 - 152913 4.7 122 75 Op 1 4/0.000 + CDS 152942 - 153433 546 ## COG1846 Transcriptional regulators 123 75 Op 2 35/0.000 + CDS 153541 - 155292 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 124 75 Op 3 . + CDS 155307 - 157151 2162 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 157163 - 157203 -0.7 125 76 Tu 1 . - CDS 157212 - 158273 809 ## BAD_0096 hypothetical protein - Prom 158472 - 158531 2.6 + Prom 158456 - 158515 2.1 126 77 Op 1 5/0.000 + CDS 158580 - 160376 2365 ## COG0672 High-affinity Fe2+/Pb2+ permease 127 77 Op 2 3/0.000 + CDS 160466 - 161128 1013 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport 128 77 Op 3 4/0.000 + CDS 161474 - 162745 1219 ## COG4393 Predicted membrane protein 129 77 Op 4 10/0.000 + CDS 162762 - 164126 1476 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 130 77 Op 5 36/0.000 + CDS 164252 - 165472 181 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 131 77 Op 6 . + CDS 165475 - 166296 274 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 132 77 Op 7 . + CDS 166353 - 166910 551 ## BAD_0103 hypothetical protein 133 78 Op 1 . - CDS 167048 - 167701 571 ## BDP_0176 TetR-type transcriptional regulator 134 78 Op 2 1/0.067 - CDS 167698 - 169890 2477 ## COG1511 Predicted membrane protein 135 78 Op 3 . - CDS 169887 - 172634 3182 ## COG1511 Predicted membrane protein 136 79 Op 1 . + CDS 172817 - 173026 80 ## 137 79 Op 2 . + CDS 173005 - 174276 1489 ## COG4905 Predicted membrane protein 138 80 Tu 1 . - CDS 174295 - 174531 390 ## COG0695 Glutaredoxin and related proteins - Prom 174618 - 174677 2.9 139 81 Tu 1 . + CDS 175065 - 175217 115 ## 140 82 Tu 1 . - CDS 175443 - 176633 2179 ## gi|225352511|ref|ZP_03743534.1| hypothetical protein BIFPSEUDO_04133 Predicted protein(s) >gi|222441569|gb|ABXX02000004.1| GENE 1 1 - 456 -200 151 aa, chain + ## HITS:0 COG:no KEGG:no NR:no LGGPLPRRLPDRTRPHPIPMKSFPTPHARSRSIRHYHPFPGAIPVYGAGRSRITHPFATL TTKQSLMDPVRLACVKHAASVHPEPESNPPQKNFAESQHVTLKNKKIDDRLIRKGASHEN LTVLQGLPATRERADDELAIIDYKEVVQIRS >gi|222441569|gb|ABXX02000004.1| GENE 2 678 - 854 98 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNQKQTINGVSYPYTSHSHVMNTQMQSQIMIPAEQKEQKYKRDAKKHETWLHLRRHAR >gi|222441569|gb|ABXX02000004.1| GENE 3 949 - 3843 4383 964 aa, chain - ## HITS:1 COG:TM0025 KEGG:ns NR:ns ## COG: TM0025 COG1472 # Protein_GI_number: 15642800 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 75 525 301 705 721 174 31.0 9e-43 MLQINMADVMNVIGSLTPYLIAIGVLFVLALIITFAVNKKTVKEVATRKIIHSESWLVAL VGIVVAVSMMLSGPLSTLLNNATITKYMLSDTTVSKANELAKEVQSEAITMLKNDDSNLP LANKKVNVFGWGSTNPVYGGTGSGSMSDQYDTVSLLDGMKEAGIETNADLTKLYTDYRAD RPVVGMWAQDWTLPEVPADQYSDSLISDAKSFSDEAVVVLTRVGGEGADLPMNMKAEGIT YENNSKDYEDFKDGESFLQLSQTERDMLDLVTKNFNKVTLVYNGANTFQFDFLNDYPQIK SVVWCPPAGQTGFSALGDVLAGDTNPSGKTSDTFLKDLTQSVSYNNFGKFEYTNMEDKAA KYTGFTGDEVTAIPGFVNYSEGIYVGYKFYETAAAEGAIDYDSMVAFPFGYGLSYTTFEQ KLNDVTYKDGKVTVDVTVTNTGDTAGKDVVEVYYNPPYTEGGIEKASANLVGFEKTEKLE PGASEDVTVEFEDDDMASYDYKNAKAYVLEKGDYNISINSDSHTVIGSKKITVDDTITYD SDSNTHNGDQTVATNQFDDAAGDVTYLSRAGHFANYKEATAAPTNFEMSDKAKETFYNNT NYDPSQFNDDSDEMPTTGAKNGLRLADMYGKDYDDADWEKLLDELTFDDMDNLIANGGYG TPAVSSVGKIQLTDADGPASLNNNFTGVGSIGFPASTAFACTWNKDLAKQFGEMIGDMAH DMHVAGWYAPAMNIHRNAFSGRTFEYFSEDSLLSGVMASNEIAGAKEKGVYSFMKHFALN DQETKRTEMLCTWTNEQAMREIYLKPFEMSVKEGGAQAVMSAFNYIGNTYAGGNNVLLNT VLRDEWGFKGFVLTDYFGGYGYQNGDQEIRNGNDSMLATTSITNHITDKSATSVKAMRTA AHNILYTAANSWQYADGEPKVATPIWKTAMYVAWGVTAILVIALEALAIKRYMDRKKAKA EVTA >gi|222441569|gb|ABXX02000004.1| GENE 4 4275 - 6308 1639 677 aa, chain + ## HITS:1 COG:L138452_1 KEGG:ns NR:ns ## COG: L138452_1 COG0515 # Protein_GI_number: 15673869 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Lactococcus lactis # 21 236 12 220 431 115 30.0 2e-25 MGAMSDLSALNLEAGNLVGGYTLISRLGSGAMGSVWRVRDDGGHQYAMKILRDSLAEDDA SSERSRDQLTARERLRREAMALQKVRHPGVCGIVDMELDDALAFIVTELIEGKNLREDVR TNGRYVGDDLERLGRKLIEAVKAVHAAGIVHRDIKPTNVMVSNTGPVLVDFGIAMGEGES HVTRTGLVMGTPGFIAPEIIDGAESDEMSDWWSVASVLAFAATGEPVFGTKPMMAVLERA AAGNANLAGLPAGTMAAFRSALDPDRTKRCTPDELLQAIALDALNPQAWISGNTSDAADS AGSEAMLPFDGSPDNPRMLWRALDHVTGEDAIGTRTLPQFVEATQAIGATVIADITDTVI ADAPDVGTSVMDINAHTATIPLGTGTRVLPVNSGDTSVLPQDTPQSTRVMPVQDAWNPAQ EAAQIDPAIKPALQRIANQRPPAVIPNASVEMAQSAQPQDMQTSAVPTAPVTPAAPLNPN VPQSVLQPPNPADVQRGELLGRGVPLCVLMAIPVAACGLFSPWIALIAGALLAWLLATIG FNMEAQLEREGRRGGSRRTSDWFARAATLPWHVLKGLGYAVPRALIMAVIAALGLTIATV TLQLPFAMVDTSIFGFTIPLPTWIEGPVSQSGVAQAGCCAIGWLVCALAPGALVLRLGAG ALRGRPKSGTTAESYDM >gi|222441569|gb|ABXX02000004.1| GENE 5 6496 - 7479 1359 327 aa, chain + ## HITS:1 COG:ML1667 KEGG:ns NR:ns ## COG: ML1667 COG1651 # Protein_GI_number: 15827883 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Mycobacterium leprae # 118 204 90 174 264 60 33.0 3e-09 MAQNSKDAQKRASRAERRAAEAAEMKARAEQMEKERKQQTLIGAIVMAVLVILVAIGAFT VYHNMHKNTETQASTQTVEEAYDKLQQVENTPKLVDKKGGLLISKDGYGKSVEGAPTVAI YMDFLCPGCGNLHRQLDEDLQKMVDAGQINLDLHFMAFMDKWSTDDYSSRAANAAIYLAE HDSDPSHLITFLEKMYAEDFQPEESSNYKSVSDDQIKEQMIASGVSEDVADKAFGRDYQD WLDAIDTYTPKRSELWNTSGTYKDSMTTPTVTINGKFWDMNQLSTAQETIEEGLLEAIGI KSDDIGKEGVMPSIGSDKDPISNTTGE >gi|222441569|gb|ABXX02000004.1| GENE 6 7983 - 9473 1338 496 aa, chain + ## HITS:1 COG:BH0055_1 KEGG:ns NR:ns ## COG: BH0055_1 COG3583 # Protein_GI_number: 15612618 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 22 282 8 272 320 103 30.0 1e-21 MTRRWTPRRFVTLRRVRVTACVVSLTLASTLAFGVGARKTVALTIDGETTTVTTYAMSVD RLLQERGVKVKTHDLVESTSPTSMLSNHDVVTVRSAYQTTITINGQEVPFWTVATSAEQL IGFFEQNEADAAKVTVNIDNVYNKLTGGLIINQNGPVTVIADGQSSESPNGKLPAASILD SKGITLNKEDRVSVEKDNGETILRVRRVTHGEETRTKAVPFGTQTIVDPSLQTGEVVVRQ EGEDGEIQQTYDVTYVDGEKESETLTNETTTKIALDQIIAVGPAASSDDSGSDDGSGNSG DTGNSDNSGKNDNSNKNNNSDNSDKKDDPNSNSGNTDNSDDNKKDDSGSKTDPDPTPTPD PTPTPTPDPTPTPDPTPTPTPQPSDPSAGCRLYHPSPAQAQAYAAGAAAQYGWTGQNWTD LVKLWTRESSWLWYAENASSGAYGIPQSLPGSKMAAFGANWRDDAAVQIDWGLSYIAQRY GSPSKAWEHSEQVGWY >gi|222441569|gb|ABXX02000004.1| GENE 7 9547 - 10476 1094 309 aa, chain + ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 12 300 2 284 293 246 50.0 4e-65 MTEHANETNATDETAQGRLLGAADIRRIAAEAGISPTKKFGQNFVIDPGTVRRIVREAGV TADDHVLEVGPGLGSLTLAILETGATMTAVEIDPPVAERLPGTIAEFMPDAVDRFRVVNR DALTVTPENLPDFQNDDSFTLVANLPYNVATPILLTLLERFDNLGTFLVMVQKEVADRLS EKPGSKIYGTPSVKLAWYGTAERVGIIGRNVFWPAPNVDSALVLFKRYEGGHTPSANNPD GSVVDRENVFRLIDAAFGQRRKTLHAALKKIVPSEAFEQAGIDPTRRGETLAIDEFVALA RAVGEVSQA >gi|222441569|gb|ABXX02000004.1| GENE 8 10473 - 11381 821 302 aa, chain + ## HITS:1 COG:MT1040 KEGG:ns NR:ns ## COG: MT1040 COG1947 # Protein_GI_number: 15840439 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 10 281 5 279 306 130 39.0 4e-30 MSDANTAINTVSVDCPAKTNLTLHVGRPRSEWGGRHELDTIYCAVGVYDTVTTSRKKPGS GFSLNLEGAYLGDLASSGSDMRRNHAVLALFAMAEASGHEPDVALNIEKRIPVGAGMAGG SADAAATILALNTLWNLDWSIERLQQVAATLGADMPFCLTGGYARGTGFGEQIEQLSENS DAVLELTDQGFAGRLLVGAYQAELRTPEVYAMFDQIGAGATDNNHLQQASISLHPRSGQA IDEALQAGAKQAFVSGSGPSVIAFVPTDDAARAVQSAWQQSRCVDRIIATKAPAHPIVHI IA >gi|222441569|gb|ABXX02000004.1| GENE 9 11425 - 12048 853 207 aa, chain + ## HITS:1 COG:no KEGG:BDP_2265 NR:ns ## KEGG: BDP_2265 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 207 1 207 212 318 78.0 1e-85 MTQANDERAARKQYIRRRQKVVFTITGTILTIALVISLLFFFHVGGLGNVKSAAVQPNYG QQAPCAAQEQDGSKGKYVENRNITVRVLNGTEFAGFAQAVSSALQNREFNTQAAGNYTSS KVERTMIIFGKNAINQAYTVNSNFTDATMVMDDREDMLIDVVVGATFDNLQNQKKVPTAG KEIDSFEGCVTVDKMTDVQKAPEHDAV >gi|222441569|gb|ABXX02000004.1| GENE 10 12286 - 13749 1523 487 aa, chain - ## HITS:1 COG:MT4026 KEGG:ns NR:ns ## COG: MT4026 COG0617 # Protein_GI_number: 15843539 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Mycobacterium tuberculosis CDC1551 # 25 484 27 477 480 455 52.0 1e-128 MLVRQKLVVPERDGVNFEVWPEAIELGRMFAAEGYELALVGGPVRDLLLHRKSHDLDFCT SARPEQFEHILRRFGRDGFWDMGRKFGTLGAMRRREDGTEVQVEVTTYRSDTYDPDSRKP EVNYGDTLEGDLSRRDFTVNAMALRVPELEFVDPFGGANDLAKGVLRTPVDPRQSFDDDP LRMMRAVRFVAQLGFRIEPETAEALTDMVDRIEIVSAERVRDELVKMLLSDRPRAGIEAL VDSGLADIVFPEIPALQLEIDEHHRHKDVFEHTMIVIDRAVALETGPDGPVPAPDLTLRL AALMHDIGKPKTRRFESGGKVSFHHHDAVGAKMTRKRLKALHFDHHMVEDVSELVNLHLR FHGYVEEPWTDSAVRRYVKDAGPLYERLNRLTRADATTQNKRKAMVFSSAMDEMEQRVRD LKEKEDFDAIRPDLNGDEIMQLLGIDPGPLVGKAYKHMLEYRLDNGPVERDVAVAELNRW YEEQQAE >gi|222441569|gb|ABXX02000004.1| GENE 11 13793 - 14443 477 216 aa, chain + ## HITS:1 COG:MT4027 KEGG:ns NR:ns ## COG: MT4027 COG0494 # Protein_GI_number: 15843541 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 76 205 62 194 248 119 50.0 5e-27 MITPADLARMLAHAADDHAQNPMEPDKLLYTSQSVSLRQETIITPNAPTPAIMPQRRATD GPTTFASLDAQELPVVREYSAGGLVFDDKGRVAIIARHSRSGHLEWCLPKGHIEKGETPQ QTAVREVHEETGILGEVVDSIATIDYWFTGTSQRVHKLVHHFALRQIGGELTVEGDPDHE AEDAIWVDFADLDDVLSYPNERKIAWLYARKLNRQA >gi|222441569|gb|ABXX02000004.1| GENE 12 14482 - 16569 1876 695 aa, chain + ## HITS:1 COG:no KEGG:BAD_1620 NR:ns ## KEGG: BAD_1620 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 695 26 719 719 894 72.0 0 MRALSAILAMVMTMALMLLYAPVPKAEAEETQESQSGTMLSIDSSTAVLTDTSGYHLSAT VTNTTDQEIPSGTLTLAMNAFYTFVSRNDIQEWSEGIGQIPTPNIVGQSEVPALQPGASA NVHIDADSNQETLASVNSWGPKPVTLSYEANGVQQDEAHTFATRTGAGINTPDTPAMNIT IVQPLEAQGWTTDNTMLEQLVNKGGVTSAELSKIAVPGKEDEARLKSLEQTFTKHDKLQV VADPTYLKAMPMPTQVDGITQPALFDITAYSALNDSKTYDSAGVGTSQWNAEQALKNYQS ALGDPNASMTTYAWQGTGNWTADALAKAKQQGYDTVIATHDFEEDDAATAETGKTVVTTD AGDITVLTAQSVLSNLAQGKATSADAEADGEGTTAGRLARFVAQSAFYQMEQPYSERNLL VCLNGNSDPAVVDALMTDVEQSPWLNITDLNTLNNADPALSGDDAAAIVPQSDGINDATQ ANLRQTLNTLAASTNDIKRFNASILTDVADDAKQAPAGLKAWRRQLVNAHGIMALHALGG ENPAGSTMVEGAGQLASLLINGVAITPTENVNVVSETAQMPVTISNSHPYPVTVKVSSLT NSMQIVTSRFDTVEVPAHGEAQVAFIIRVATSGTADATLSLQDRQGITFGATQTTHITSA LQISDKTGFIIIGIAVLLGALGLWRQSHRKKDPDE >gi|222441569|gb|ABXX02000004.1| GENE 13 16566 - 18281 1748 571 aa, chain + ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 3 571 78 631 640 144 26.0 5e-34 MSSSVGRNSLIMASGTAASRVTGQIRTILLAWALGTTGYAANAYQAGSMIPQVIYTLVSG GIFNAVLVPQIVRTLKAKDAETKLNKLITLAITMLLAVTILMALCTPLLTKLYVNGSPET MALATSFTLWCMPQIFFYGLYTVVGQILAAKDHFTAYAWSSVGANIISCIGFGTFIALFG RATEHPLDFWTADKIALTAGTWTLGVAFQALVLFIPLTKIGLKYRPIFGLRGIGLRSMGP VAAWSVGIVVIDQLANIVITRTSTNAPMLAQQQFGINPLDVAGNASYQNAYTIYMLPYSL IAVSLATAIFPKISRAVADHNIAEARIDLSQALRNMGVIMCYFAVAFVVMPVPIILALLP SVSVREAILMAGPLVTLGVGLPFASAYLIIQRTFYAFEDGKSPFIFMLFAMGIQAVSVII GAKLLPPTEWTTMIGMVGAMSYILPIPILYAMLRKRFENNIDGPRIAISYLKSIGAAVAT MFIGVTVRDSVYQLVGAQIGAVDGHMNWIQAVACAALLAIVAFIVYVGMLRLLRSEEFKE AIALISSRIPGLRKPTSPNDRLEQDDAENGE >gi|222441569|gb|ABXX02000004.1| GENE 14 18323 - 20347 1704 674 aa, chain + ## HITS:1 COG:no KEGG:BAD_1622 NR:ns ## KEGG: BAD_1622 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 674 1 675 675 898 73.0 0 MKPQLGDTISNRYVLVSPLREETGLQVWKASDHVLARDCQLFIVSSSKALQEVNATASML AISHDSHFTKVLQLQHAGQVALVVTQLDEGMTLSEYLALNANQPLSYTAMRSIIGEVIES LHALQKDNLTHFSISTDTVRLTRSGIQIADAPVSIMLADTSRAQALENREQLAIRQISAL LYAMLIRRPSTLSTDFRLEALAPTTPMEFRVICKRGLELEEDDGFPTVPMATIAELEALL GEYQPLSSLGSMDITLPSMDSECSIANVPLLQILEKDVLPLPDTLAAAGSIPEMTFTAPE PHNDFSDGKEALAKGVAATSGAVKSLWSSGRELLSEEDIDGVTDTSDSPFSFPIRVSVPD DGMSSDDSQLEKTGRIPVIGADGQVIQPGEESARALKAEQEAIDAAYAAGRAAVPPSFTP KNPSSASANTDVADAKLFGKLKTKVVAIIVAVIVVAVALGFAVHGLMQPSDSVTTDSKGP WPEINLDEVPFGEGDQSDANSADSSNSDTSGNTDSSNSKDSSDASANTPASGESTASKQP KKTEDKVVTADKQSKKVPDPKQPENTTAYEIDNRQFLSNPDGQQGYGYYVHLSQPQKAYR MVIKIRSSGGQGYIRVNATNSPSQGEQVAQFEFDASGTTDIKFDKAVETQDIMLWVPLDS LPGNQLYIESIQVF >gi|222441569|gb|ABXX02000004.1| GENE 15 20580 - 20819 134 79 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_1280 NR:ns ## KEGG: BBMN68_1280 # Name: not_defined # Def: aaa+ superfamily atpase # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 57 25 82 266 80 63.0 2e-14 MLRDGYPRLYSSEMPLELFFSSYLSTYVERDVAGYLNVRNVTAFHKFLRLCALSGALWRL AWNQVFKPKTSRYIPPQTG >gi|222441569|gb|ABXX02000004.1| GENE 16 21093 - 21728 690 211 aa, chain - ## HITS:1 COG:no KEGG:BDP_1244 NR:ns ## KEGG: BDP_1244 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 211 1 211 215 312 69.0 6e-84 MATIPEQYESQRVGVQGYRVLNLDLDGVCADYKGAIRDYLQRQGIDVPERALQTAHYNLT REDGWPFETLDDYIETHKAAEREHLYATMKPLPGVAQALQRLANEHVYIRIVTHRLFVSG QHQMVVSDTAQWLDSNRIPYMSLCFTGLKDSMQATIHIDDSPANIETLREAGQHVVVFDQ PYNSTYAGPRIDSWSDTNVETLLTLFESWPE >gi|222441569|gb|ABXX02000004.1| GENE 17 22312 - 22434 259 40 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352369|ref|ZP_03743392.1| ## NR: gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 40 74 113 113 78 100.0 2e-13 MKNNTFNQIINANLASVDPGFGQFALAKASADLFKKVINK >gi|222441569|gb|ABXX02000004.1| GENE 18 22676 - 23659 735 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 22 325 3 303 306 287 50 2e-76 MCSARLVALVVRYSGNMSDLRDVIIVGSGPAGYTAAIYLGRAGFKPLVIAGALTPGGQLV NTTEVENFPGFPDGVMGPELMDNMQRQAEKFGAEIVWDDVVSVSNNDVTGVKTVSVDQGD VFETHALIIATGSEYRKLDIPGEAEYSGKGVSYCATCDGFFFRDKPIIVVGGGDSAFTEA DFLSRFGSSVTLIHRRSEFRASQILVERAQQNPKITIVTDSVVEEILGDDNGAQSVNIRN VITGETSTIAANGIFVAIGHSPATAFIDGIVQRDAGGYIQVDGASTRTSTAGIFAAGDCV DSIYRQAISAAGMGCRAALDAQAYLQQ >gi|222441569|gb|ABXX02000004.1| GENE 19 23816 - 25171 956 451 aa, chain - ## HITS:1 COG:Cgl3034 KEGG:ns NR:ns ## COG: Cgl3034 COG1475 # Protein_GI_number: 19554284 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 129 445 81 376 379 227 45.0 3e-59 MATKSRLGKGLGALFPSLPGESAKSEATTEPAVAVAGAKADNKIAGKVSENVAGGATVAG QSAGKTAVKSSVATAKASVDAVHDMKKNVSRETKKGSGHRASMPSITLNETAHPADMFFG STSPVATAEVKQESVSRETAAVKKTEDKKNDEPELLPVQGGYLVELRLSDVGPNLHQPRT IFDEDDLRELADSIKEVGVLQPIVVRKRPLAQIEAARKENAAKDAESHNMFDGRMDSMYE LIMGERRWRASQIAGLKTIPAIVKTTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDD FGLTQAQLSKSVSKSRPQIANTLRLLNLPATVQKKVASGLLSAGHARALLGLPTEADMEQ LATRIISEGLSVRSTEEIVSMKVAESDQPKKAKTNKLNPWAGTPMQVGLEKRFGTKVSIK GSKEHGRIEIVFKSEDDMKRIVDLLMPTAEK >gi|222441569|gb|ABXX02000004.1| GENE 20 25174 - 26154 981 326 aa, chain - ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 51 311 30 289 307 268 53.0 1e-71 MTGPEGPDNLTSMESATETIKRIFGGSDSPLGSQIADESTRYRALQKAVCPKPEQTRLIA VANQKGGVGKTTSAVNLSAALAQFGSKVLLIDMDPQGNASTALGAPHASGEPSVYDVIEG RKTIAEVKRTCPDFDLLDVVPASIDLSGAELEVADMENRNVLLKTAVDEFLETSEEHYDY VIIDCPPSLGLLVINAMCAVHEMLIPIQAEYYALEGLGQLINTIGLVQEHFNPSLLVSTM LITMFDKRTLLSREVHDEVKNHYPTIVLNTTIPRTVKISEAPSFNQSVIAYDPKGMGAIA YCEAALEIARRSQTVLKAIDARRNEN >gi|222441569|gb|ABXX02000004.1| GENE 21 26397 - 27191 761 264 aa, chain - ## HITS:1 COG:Cgl3036 KEGG:ns NR:ns ## COG: Cgl3036 COG0357 # Protein_GI_number: 19554286 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Corynebacterium glutamicum # 12 244 5 188 209 139 39.0 5e-33 MSDVTDELDDSPMLEEVLGDALGKLRVFHAKLAEEGEPRGLIGPRDVGIIWERHILNSAA IVPFVKEATAKKQFKTVADIGSGGGFPGIVAAACLPDHRFTLVEPMERRVEWLNECVADM ELNNVTVVRARANEMIEAIAGATGAQGGNRGNGSARNGKGGKNGRGVAVRGPVLDLDGKP IQAKHPFAVVTCRAVAPMTKLSGWTLPLLERGGRLVALKGRSAQEEIEKASKEIAKCGGI RPRVVDAEVGPGLESTHVLMVDKK >gi|222441569|gb|ABXX02000004.1| GENE 22 27368 - 27895 893 175 aa, chain - ## HITS:1 COG:MT4039 KEGG:ns NR:ns ## COG: MT4039 COG1847 # Protein_GI_number: 15843554 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 2 159 28 184 187 97 47.0 8e-21 MAQDEEKTIDQLNEEADIAADYLEGLLDIVDYEGDIEMGVRNNRPTVQIVADDDTDIKHL IGRNGEVVDALQQLTRLAVQQKTGERSHLIVDVDGYLKRKRQRLHDIALDAIDEVRETGE PVDLKPMNSFERKIVHDVVREEGMKSRSHGEEPRRYVTVYLKASAAEDAEDEDEA >gi|222441569|gb|ABXX02000004.1| GENE 23 28038 - 29072 1306 344 aa, chain - ## HITS:1 COG:MT4040 KEGG:ns NR:ns ## COG: MT4040 COG0706 # Protein_GI_number: 15843555 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Mycobacterium tuberculosis CDC1551 # 19 268 13 264 366 112 30.0 9e-25 MNQNQFLLDSGFWGWLYKLLYPVEWLMTQIMAVFHKFLVMLGMNEIGFSWVMSIVFLVLV VQACVFPLFYKSMKGMRKMQAQMTVLQPKMQRIQNKYKGKNDPASKEAMQREMMKLYQDN DANPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRDGQGLGAFDIATAKQFTSTT VFGVNVADNFTTAAVHGKVVIAIFVALMCFCLWFMQYNSMKRNMAQSAANKQTEMMQKMM LWMFPIMYIFSGIAMPFAVLVYWLTNNICNLLRSIWQIHVFPTPGSPAAEAKEKRDHVHE NARRAKAGLPSLEEEALQKAKEAAEVKEKSGYQRQQPSRKKKKK >gi|222441569|gb|ABXX02000004.1| GENE 24 29404 - 29766 177 120 aa, chain - ## HITS:1 COG:no KEGG:BAD_1630 NR:ns ## KEGG: BAD_1630 # Name: rnpA # Def: ribonuclease P protein component # Organism: B.adolescentis # Pathway: not_defined # 1 120 1 120 121 163 85.0 2e-39 MERLKSHRDFVAVLKRRRRVSREDIVVHYLVHDDAIIDDSAAMRGRRVGLAVSKAVGNAV TRNAVKRRFRVLARKYESALPESCDIVLRAKPSAAHADFLSLEQQIAACFEAVNRKAVRR >gi|222441569|gb|ABXX02000004.1| GENE 25 29784 - 29966 302 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026649|ref|YP_910494.1| 50S ribosomal protein L34 [Bifidobacterium adolescentis ATCC 15703] # 1 60 1 60 60 120 98 3e-26 MRSRALAWQKTPGALIMKRTFQPNNRRRHMKHGFRQRMRTRAGRALINRRRAKGRKSLAA >gi|222441569|gb|ABXX02000004.1| GENE 26 30198 - 31712 1962 504 aa, chain + ## HITS:1 COG:MT0001 KEGG:ns NR:ns ## COG: MT0001 COG0593 # Protein_GI_number: 15839373 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Mycobacterium tuberculosis CDC1551 # 18 501 2 505 507 338 43.0 1e-92 MHTWKKSVEKGESVADTTTDPLEQARGVWSDALALLHQNPALSIRDKSWLENVFPEGMWG PTIVLCVPSAAAQQTLQNELNQPLLEALREAAEQDIFPAFKIVEKKEPAQPAVEEYPHFS PAPHAEETTQGQLPIPVVMPPERHNNFQRGQNRPLLDPKTHLNKNATFDTFVPGDSNRFA RTVALAVAEGSGHDFNPLCIYGGSGLGKTHLLNAIGNYALVKDPTLKVRYVTSEEFTNEF IEALGDTNQNSGQIKEFNRRYREVDVLLIDDIQFLSGKDATLEQFFHTFNTLHQANKRIV IASDVPPKDLQGFNERLISRFESGLTVDVKPPDLETRIAILRMIAHGTNVQDDVLNLIAE RFTENIRELEGALNRVTAMASLSGQPVTRALAEQTLQDFFSTDVEIKPTDIITQVAKYFY ITFDDIVGRSRTKKIALARQIAMYLVRELTSMSLNDIGQVFGGKDHTTVMHAYTRISDEM QEKQEIYNYVTELTLQLKQRSGEK >gi|222441569|gb|ABXX02000004.1| GENE 27 32274 - 33398 1356 374 aa, chain + ## HITS:1 COG:MT0002 KEGG:ns NR:ns ## COG: MT0002 COG0592 # Protein_GI_number: 15839374 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 8 372 20 400 402 240 36.0 3e-63 MKVEVNSQALADAVAWTTRVIDARPASPILAGIRLEAIDGTLQLSAFNYAISARHHIEAG VDESGSILVLGKLLADITKSLPAAKTYLSTDGSTLTITSGKSTFTMQLMPDNEYPDLPVV PAKLGQVDAQTFAQAVAQASVAVSREENRPVLTGIRVQFQGNKVIMSSTDRFRLSRSSFT WTPENPDINTTALVRGALLRDVARSLDEHQNIVVDFDPENPSLLGFENAGRVSTSQLIDG EFPAVDRLYADEYPIHAVINKQDLISAIKRVSLVAERNAPIRMAFTSQELTLTAGSVDEA QAKEILDIDMDGEDITVAFNPAYLIEGLSAISEPFVRMKMTTAVKPVEFNGQQESNSEES MDYRYLLVPMRFNS >gi|222441569|gb|ABXX02000004.1| GENE 28 33537 - 34796 896 419 aa, chain + ## HITS:1 COG:ML0003 KEGG:ns NR:ns ## COG: ML0003 COG1195 # Protein_GI_number: 15826868 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Mycobacterium leprae # 1 358 1 360 385 210 36.0 5e-54 MYISRLALDHYRSWEHCVLDFKPGINILQGANGLGKTNIVEAIEVLSTGSSHRASSSLPL IEKGCTSATIRANVEDGETQHTYEATIVARGANRARIDGGKSQYMRDLIGRTPSVSFTPE DQRLVAGDPATRRNFINQAASLLLPHYAQTLQQFTHVAKQRTALLKQLGDGTNLDPQYGQ QAVLSGLEIWTGQFIDLGMQLTRDRNNVISRLEEPFARIYASLAGDDERAALAYEPSFDE VMLFDDPAAEISRHFQRIYPGEVARGQNLIGPHRDDLTLLLNDMNAREFASNGEMWTMAL ALKMALYEAVSAHFESKPIVILDDVFAQLDEARRGQILDFAMRQDQVLITVAAASDIPRM DAGRFHADAHVIDVAALRRQSQDGQHDDLTAMMAQLVAGRESATQSSAAQQSVNRQEQR >gi|222441569|gb|ABXX02000004.1| GENE 29 34796 - 35281 370 161 aa, chain + ## HITS:1 COG:ML0004 KEGG:ns NR:ns ## COG: ML0004 COG5512 # Protein_GI_number: 15826869 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Mycobacterium leprae # 40 153 62 175 189 63 28.0 1e-10 MPNPPICETLHLDQRKLPAEVFERISRRAGRYKEREERARQAWENFGKPGRDPQTVGNIF NVIATQGSWTPHLKIAQMQNHWDQVVGVENARHSYPVDLRDGILTIRCDSPAWTTTLTYM IPLLTDTIRRRLEGLTINEVRVTGPQQQGFSRGRMTRRPRY >gi|222441569|gb|ABXX02000004.1| GENE 30 35575 - 37674 2933 699 aa, chain + ## HITS:1 COG:Cgl0005 KEGG:ns NR:ns ## COG: Cgl0005 COG0187 # Protein_GI_number: 19551255 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Corynebacterium glutamicum # 38 698 5 683 684 742 56.0 0 MADLDADSLNESAENTQEDQIQNDQLEDAQLDDTLAPEHYDASDLRVLEGLEAVRIRPGM YIGSTGPRGLHHLVYEIVDNSVDEALAGYASHIEVTILPDGGVRVVDDGRGIPVDEVPGE GVSGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRVNIEVRRQGFHWTQTYI DQKPTARLAKGEPMGEDESTGTSVTFWADGAIFETTTYDFETLRNRFQQMAFLNKGLKLS LTDLREPDQAGDEVAGESDDNAEPKHQTVTYQYNDGIKDYVDYLVKSRKATPVEPDVIDF EAEDLKIGISAEIAMQWTTAYSEAVHTFANTISTTEGGTHEEGFRAALTSLVNRYAREKN ILKDKDENLSGDDVREGLTAVVSVKLTTPQFEGQTKTKLGNSEAKTFVQRVMTDKLGDWF DSHPSEAKNIIQKAIEASRARLAAKKARENTRRKSIFESAGMPDKLKDCQSNNPEECELF IVEGDSAGGSAIQGRNPITQAILPLRGKILNTERASLDRMMKSETIESLITAVGGGYGED FDLNKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYRLKWTKG AHDFVYTDAERDRVLAEGKSAGRQLPKGEGIQRYKGLGEMSYQELWETTMDPDHRILKQV QIEDAAAADETFSMLMGDEVEPRRLFIQRNARNVSWIDA >gi|222441569|gb|ABXX02000004.1| GENE 31 37728 - 40442 3646 904 aa, chain + ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 38 903 10 855 856 991 59.0 0 MADENNSNEDGQFVPDGSMEPLSPQEADNTDYGLMVGERIQKKDLQQEMRDSYLAYAMSV IVDRALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYSKCARVVGEVMGKYHPHGDSAIYDT LVRMAQSWSMRYTLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFLPN YDGKTQEPTVLPARFPNLLCNGSSGIAVGMATNIPPHNMREVAEGVHWALDHPDASREEL LENLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVITELPY QVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHSQ LQQTFGANMLALVDGVPRTLSLDAFIRHWVGHQLEVIARRTAYLKREAEERDHILQGYLK ALDMIDEVIALIRASESAETARTGLMDLLDVDEVQADAILAMQLRRLAALERQKILDEHN ELMRRIADYNDILAKPERQRKIVGDELDEIVSKYGDERRTKILPYSGEMNVEDLIAEENV VVTVTHSGFIKRTKADEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGRV YRLKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYEVAKYLVLATRSGKVKKTA LAEYDSPRQGGLIAVRLMTGENGENADELIGAALCNAEDDIILVSKLGMSLKFQANDEQL RPMGRQTAGVQGMKFREGDELLAMDVVWGDSDKDLFVVTNEGFAKRTAISEYRLQGRNGF GVKAVQLAEGRGSLVGAVIVEEDDQIMAIMKSGKVIRSNVDEVKRTGRTTQGVTFAKPDK NDEIISIARNEEKDDESAESGESVEKTESAEHGTNATVNEGASASSEAATEANAGNGDGE NVEA >gi|222441569|gb|ABXX02000004.1| GENE 32 40518 - 41054 827 178 aa, chain + ## HITS:1 COG:no KEGG:BDP_0007 NR:ns ## KEGG: BDP_0007 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 178 1 183 183 228 77.0 6e-59 MSENIEGQQMPEVGQAPRVARSASSQPLIGADQVQAHEGASSASGGVKVREKRRGGAPRA RRMSLSLTRIDAWSAAKVAFMLSIAGGIIQIVAVALLWGMLNVVGVFDQVTQIVSSTGLD AGGFDLTNVFSLGTVLSAVTIFSIVEVVLITVLVVIFTLLYNVVSTLVGGIHVTLGDD >gi|222441569|gb|ABXX02000004.1| GENE 33 41677 - 43023 2066 448 aa, chain - ## HITS:1 COG:CAC0737 KEGG:ns NR:ns ## COG: CAC0737 COG0334 # Protein_GI_number: 15894024 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Clostridium acetobutylicum # 5 446 2 442 443 572 64.0 1e-163 MLTDEYVKRVYAQVEKRDGDQPEFLQAVREVFESLEPVVAKHPEYEKAGVLERIVEPERV VKFRVAWTDDEGKVQVNRGYRIQFNSAIGPYKGGLRFHPSVNEGVIKFLGFEQILKNSLT SLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELCRHIGQFTDVPAGDINVGGREIGYLF GQYKRIRDEYSGVLTGKGLEFGGSLARTEATGYGLCYYTAEAMRVLRNDSFEGKTVVISG SGNVAIFATEKAQALGAKVVTASDSNGYIYDPNGIQLDVVKDIKLGHRGRIKEYAERVPG SEYHEGCKGVWTVPCDIALPCATQNEIDEESAKALVANGCTVVCEGANMPSTPEAIAVYQ ANNVLYGPAKAANAGGVAVSGLEMSQNSYRLSWTFEEVDGKLKSIMENIVANSLEAAKEY GHEGDLMLGANAAGFVKVANAMVAQGVL >gi|222441569|gb|ABXX02000004.1| GENE 34 43265 - 43768 593 167 aa, chain + ## HITS:1 COG:Cgl0854 KEGG:ns NR:ns ## COG: Cgl0854 COG1970 # Protein_GI_number: 19552104 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Corynebacterium glutamicum # 1 137 1 132 135 82 43.0 4e-16 MIEGFKKFIARGNMIDMAVGVVMGGAVTTVVNSIVNNVINPFIAMIFGKPNMDGLLAITF NNATVSFGAVLGAILNFLIIAAAVYFCILVPINKFRDVTEALLAKTKLAEERSKAEEEAA KEPEISTEEQTILLLQQIRDELARQNARNTQNVPNDSDTVAGAVAVR >gi|222441569|gb|ABXX02000004.1| GENE 35 43859 - 44218 151 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAWRGSGVRIPLAPQIGFPVISGNPFFIPKSEIQTSIPIPPVTGENRTQPGTSQSKNLHR VEESSHQQASQHPKTSSHWRKLDAARHLTVQIPPVTGTYDPLRHLPESVLFQRMEESPR >gi|222441569|gb|ABXX02000004.1| GENE 36 44539 - 45315 507 258 aa, chain + ## HITS:1 COG:Cj0620 KEGG:ns NR:ns ## COG: Cj0620 COG1451 # Protein_GI_number: 15791980 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 167 252 128 213 215 65 34.0 8e-11 MPNNHRSQRNNSGRASRGVRNRNRTLSEETTQIAGMTVTIVRKAIKNMYLRIKPPNAQIV ISAPSRMSQAAIARFVTERKPWIERARRTMLQAKDEQIRQSDFNGLDRVNGSHGPDNLNG LENSGGVGDRNNPGDPNSLNNPRVFVWNDAAKERAVWAINAQLPVLLAKWSPIIGRKPTH VTLRIMTSRWGSCTPKTGRIRLNLQLGLMDPRFLEYVLVHEMTHLWENGHGEDFQRRMSA YLPQWRQLRRELNRHVVL >gi|222441569|gb|ABXX02000004.1| GENE 37 45634 - 46617 1063 327 aa, chain + ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 1 311 1 309 318 225 37.0 9e-59 MAVLRKVGIIGIGHVGAHVANAVLSAGLAEELKLCDINEQKVVSECQDLSDTLGFYPHNC VIGNYGTQYEQLADCDVVINAAGDVKTSAKDRDGELFVTTDIARTWISRLFNAGFHGVII TISNPCDVVATEIWHITGYDPRKIIGTGTALDSARLRNAIAKRVNVDQKSIGAYMLGEHG NSQFAYWSNVNIAGKPLDQLAQDDPQRFALDKDETEQDARRGGYRVYAGKECTEYAIAAT AARLTQAVLCDEHYATACSTLLTGEQGESGNYASLPCIIGANGVEEVLSPTLTESEQAKF HASCEHIRANIAQLAWWNDECHPMLRG >gi|222441569|gb|ABXX02000004.1| GENE 38 46747 - 48069 1466 440 aa, chain - ## HITS:1 COG:sll0260 KEGG:ns NR:ns ## COG: sll0260 COG1253 # Protein_GI_number: 16331101 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Synechocystis # 2 428 5 432 448 233 31.0 7e-61 MSLGLNILLIFVFLLLGSVFAGTELALVSLRGSQIDQMEQEDARGKRVAQIARDPNTFLS TVQIGVTLSGFLSASFGESSISPYIVPIVESWGVPTSVAAPLTTIVLTLIISYCSIVISE LVPKRIAMQRNEQIARAVVPAIHVFAKVCKPIIWLIGKNTNIIVRLLGFDPNETDSEVSD EELRVLVNTNTNLSKDERTILDDVFDASETIVAEVMRPRADVVFLDGDMPIEKAAAYVRE MPYSRYPVTGKDFDDVLGFVHVRDLLDIRDPEAKTVADVTREGISLPGTSKLLPSLELLR KRGIHLAVVIDEYGGTDGIVTLEDMTEELVGDIRDEYDLPEEKGGERTERTTFVNGVATI EGGMTIEDFADLTGIELEDGPYETVAGYFLAHTGKMGEIGDVLPSDDGYDMTVTQVDGRR IETLEIRKHTVDVDAAKATK >gi|222441569|gb|ABXX02000004.1| GENE 39 48050 - 48145 57 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFKPRDMVPLYRGGMSKCLYLLIFLDFLNYS >gi|222441569|gb|ABXX02000004.1| GENE 40 48219 - 48914 622 231 aa, chain - ## HITS:1 COG:MT3694 KEGG:ns NR:ns ## COG: MT3694 COG0288 # Protein_GI_number: 15843201 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Mycobacterium tuberculosis CDC1551 # 20 225 10 193 207 148 40.0 9e-36 MADELFVDQDEVEGTASGVWSRMLAGNRRFAEGKPEHPNRGAEAREALVDTHAPEAAILS CSDARVSPDIIFDSGLGDLFTVRTAGQIIDEAVIASLEYAVTVLGVRLLVVLGHQNCGAI KQASKDYEALLHKLTADAEDSLMAADSIADIDERICASDSLMMRTVGFSIWQAHESELES SEDFERVHIARTIELLVEQSEAIQQALASDKLMIVGARYQLDSGKVEVLSF >gi|222441569|gb|ABXX02000004.1| GENE 41 49000 - 49176 187 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352394|ref|ZP_03743417.1| ## NR: gi|225352394|ref|ZP_03743417.1| hypothetical protein BIFPSEUDO_04014 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04014 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 58 1 58 58 112 100.0 7e-24 MYGRFRVLSGDISLMYDSPKGEKPERCTPEVGFSHDGLPYISEKAHDKAPILPYIRQI >gi|222441569|gb|ABXX02000004.1| GENE 42 49299 - 49499 93 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQYIYLTALALLGLCMLISPRQLWKISNFLWTQKGDPSNLYTSLMRISGAAFLVLALILF IFCRLQ >gi|222441569|gb|ABXX02000004.1| GENE 43 49508 - 50497 625 329 aa, chain - ## HITS:1 COG:no KEGG:BAD_0015 NR:ns ## KEGG: BAD_0015 # Name: rps8E # Def: SSU ribosomal protein S8P # Organism: B.adolescentis # Pathway: not_defined # 61 127 1 67 140 137 100.0 6e-31 MKSRRVFLFSTIISVCLCTVMTTPAFAVNWWQVGWIVANNVIDRVVNLDGQSSNDQYSTY MVSPSIVFNNGTNGGEFYMRPQVSSRVTSFEMHAHRANPVDFGANIVLALSTTSGKRVIN KTVGTNQYVSYTRSSSDGTGTWDARFTEDDSGKNWQCYYRQYYGNGRSLPTIIDVPNTNL IDYLANDGTTFRYNANPDQPRTTKAPTLDIKQLNNQFYDEKSGISVDYLRDYNTGDDIIF EDIIDKIQFNPNENNTSLFFLLDNEYIEWKFNGNITNKYKKEDRINLHFKVITVKQYKGI TFESIDFFKDSSNGINKQGPYPCISDYLK >gi|222441569|gb|ABXX02000004.1| GENE 44 51199 - 53955 3641 918 aa, chain - ## HITS:1 COG:all4861 KEGG:ns NR:ns ## COG: all4861 COG2352 # Protein_GI_number: 17232353 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Nostoc sp. PCC 7120 # 86 918 20 982 982 355 30.0 2e-97 MTIENEQITPADAAIVSSGTGTKGPEERDLPASLKEEMDLCLQILREVLGEFDEKLLAKF DEVREHALNASAERFSGILTDTNPNQDDLQKVVDIIDKTDVHEAQLLARAFTTYFHLANL CEENYRVSVLHSREAAVDDTQAVDPVNEMTCAYHQLINEMGPAKAKELLDQLEFHPVFTA HPTEARRKAVEGKIRRISQLLATHKLLGGSDKKENSRRLFNEIDALFRTSPIALKKPTPV EESETILDIFDNTLFYTIPQVYRRFDDWILGDKAGLVPPVCPAFFHPGSWIGSDRDGNPN VTAKVSRQVARKFSDHVLGALQIETRRVGKNLTMEAETTPPSAELKSLWNHQKEMSERLT DKAALISTKELHRAVMLVMADRLKATIDRDADLMYHSCEDYIADLKVVQRSLAEANAKRS AYGPLQDLIWQAETFGFHMVEMEFRQHSVVHSRALEDIREHGLHGERGELQPMTHEVLDT FRALGSIQKRNGIKAARRYIISFTKSAQNIRDVYELNRLAFSHPKDVPTIDVIPLFEQLE DLQNSVDVLEEMIKIPEVQARLKATGGKMEVMLGYSDSSKDAGPTSATLALHSAQERIAK WAESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCRFKLTEQGEVIFARYGNPAL AIRHVESVAAATLLQSAPSVEKRNTDMTAKYADMANKLDEAAHNRFLDLLNTDGFAPWFS TVTPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEQFG DLNTLRQAYEEWPLFSTFIDNIEMSLAKTDERIAKMYLALGDREDLNKKVLDEMELTRKW VLEIVGDKWPLQHRHVLGQAIRIRSPYVDALSATQVLALGSLRKRVDKEELTHGQKENYT YLILCTVSGVAAGLQNTG >gi|222441569|gb|ABXX02000004.1| GENE 45 54215 - 56056 1590 613 aa, chain + ## HITS:1 COG:no KEGG:BAD_0025 NR:ns ## KEGG: BAD_0025 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 7 613 25 610 610 1103 86.0 0 MSAQYEHEHETNFDSAEKSASAVSKFHTHSIPLDMEDIERDWDKPVAEAGIAAKASVIVR VGMLDLGAGTGSFRVREMMHRIAYPLGVHVRADVNLTDIEASCTDGKDRITEVVDLPTTG VNTERIWLLEHFADWFNVNLGKGSMYHSQSDVSEGLMQHLDKRDASQVSADLSKRLRERQ KAEQNQEGSDDPVLDALEMVTERAEVTDTTAQPLHLRDIEAASEQHNRGEREAERETKRE TAGTANVTSSESTTKKARKNRNHKPPKGQYAEHFDHVGKEADQSQGITVRQAHERLDMIE RRKPLYSPAFAGFASACACASFVFLLGGGPFDMIGAFIGAGLGHWLRRRLFAHHLNQFFV TFVCVAVAALACTGTLRLIGIFEPVALQHDTAYIGAMLFVIPGFPLITGGLDMAKIDFPS GIQRVAYVLCIILMATLAGWMVASIVHLNPEGFEPLGLNPVVNCLLRFVFAFIGVWGFST MFNSPQRMCLVAATIGAITDTLRLEIVDMGVPAEAGAFIGALLAGLLASAWRSAVHRSWL APHLGYPRICLTVPSIVIMVPGLYMYQAMFHLGQFDTLNALDWAFRAFMVIICLPIGLAM ARVITDKSWRYDI >gi|222441569|gb|ABXX02000004.1| GENE 46 56234 - 57862 2113 542 aa, chain + ## HITS:1 COG:MA0003 KEGG:ns NR:ns ## COG: MA0003 COG0591 # Protein_GI_number: 20088902 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Methanosarcina acetivorans str.C2A # 1 513 1 487 514 377 41.0 1e-104 MVTKDFWVLLAMVIYFVAMLTIGFIYSKRSNSSTRQYFAGGRGVGPWLTALSAEASDMSG WLLMGLPGVAYFTGAADPLWTALGLALGTYLNWKLVARRLRRYSVVAGDAITIPDFFSKR FHDKRNIVSTIAALIILVFFCVYVGSCFVTVGKLFSTLFGWDYHLTMVIGAAIVFAYTVI GGYLSVVVTDFIQGLLMFFALAVVFIGSVASVGGVDNTVAFLKGIPGFLDGTQMATPILN DAGEQIVKAGQAMFGAPTEYGVITMISMLAWGLGYFGMPQVLVRFLSIRSSEEIKKSRII ATTWCVVSLACGVCIGLVGRAMMPTQFVTQSAAENIFIVVSQALLPSFMCGIVVSGIFAA SMSSSSSYLIIGASAVGENIFRGLLYRKATDRQVMMVARITLLVMFIFGIVVAFDQNSSI FQVVSYAWAGLGASFGPLMLCSLYWRRTNKFGAIAGMLSGTATVLIWHNFIKPLGGVFAI YELLPAFIISLLFIVVVSLLTPAPDAEVLHEFDHYLDDPDDRKVDDDLVAAEIASGEKRA KI >gi|222441569|gb|ABXX02000004.1| GENE 47 57983 - 59083 1696 366 aa, chain - ## HITS:1 COG:L0358 KEGG:ns NR:ns ## COG: L0358 COG0180 # Protein_GI_number: 15672048 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Lactococcus lactis # 41 366 3 339 341 216 41.0 4e-56 MTDETQEQQITAVGNEMSASFLAAKKRSDATLAAIEQNPGKFTMLTGDRPTGRLHLGHYF GSIRERVAMQNRGVNSNIIIADYQVITDRDTTAHIEDNVLNLVLDYMAAGIDPEKTMIFT HSAVPAENQLMLPFLSLVTEAELHRNPTVKSEMEASGHALTGLLLTYPVHQACDILFCKA NVVPIGKDNLPHVEITRTIARRFNERYAKKHPVFPEPAAILSEAPEIPGLDGRKMSKSYG NSIMLGATAQETAKLIKKSPTDSERRITFDPIARPQVSALLTTAGLVTGRDPKEIAEEIG DSGAGALKAYVIESVNSFLEPHRARREELAKDMDYVRDVLAEGNKKANAIANETLEQVRD AMGMRY >gi|222441569|gb|ABXX02000004.1| GENE 48 59211 - 59591 421 126 aa, chain + ## HITS:1 COG:no KEGG:BAD_0028 NR:ns ## KEGG: BAD_0028 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 126 1 123 123 134 89.0 1e-30 MGRGRQKAKQQKIARKLKYLTTDTDYDELAKELGAQEPGSGSFDPFADIEAKYSHDADAE DEISEDAQESAQTDAEDDLDEYAKWAAEAAAKATSGEFPAAKSAAPKPHKPIPMPMPSAL KPKKQD >gi|222441569|gb|ABXX02000004.1| GENE 49 59703 - 60140 452 145 aa, chain - ## HITS:1 COG:no KEGG:BDP_0028 NR:ns ## KEGG: BDP_0028 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 145 1 145 145 237 84.0 9e-62 MAVIREQDLHKGHDAFAQWLQTSHRMIADNIPANTDAARDFRLEFSPRLPRQLWAMAVRY SLHLLEKKAPGAGVEVRVAPWGAIKILDGPASDPHNLTPPDVIELEPDVWMRLATGITSW AEEKEAGRITAVGERDDLSSLLPLV >gi|222441569|gb|ABXX02000004.1| GENE 50 60495 - 62939 3577 814 aa, chain + ## HITS:1 COG:slr1367 KEGG:ns NR:ns ## COG: slr1367 COG0058 # Protein_GI_number: 16330178 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Synechocystis # 22 814 47 842 855 723 47.0 0 MTEITAPKSAVTAEQFADEIREQLKYTQGVTVEQAKPADVYVAASAAVRRHLMDSWFKTQ SDMVNGNTKAVGYLSAEFLMGKQLRNALLNAGLTEQFDAAVKELGFSVQDVVDAEHEPGL GNGGLGRLAACFIDSLASLGVPAFGYGIQYKYGIFEQKFDENGKQIETPDYWLTNEEPWG HIDYNRDQKVSFGGEVVEEDGKKVWKPAWSVRAVPVDYMVPGYASGRVNTLRLWTAKSYD EFDLLTFNKSEYLDAVKPQVEAENISKILYPEDSTPQGKALRLEQQYFFVSASIHDAIRV FYPGQDKPDLTTFADKITFQLNDTHPVIGIPELMRVLMDEYGYDWDTAWTVTNKTFNYTC HTLLPEALEVWPSKLIGELLPRHLEIIEKIQDQFAAELKAKCVDEATIKDMAIYTGDSVR MAYLATYGGSHVNGVAELHSQLLKDVTLKNFSDVYPDKFTNVTNGVTPRRFVKLANPRLS DLITEGLGTDKWVSDLELLKGLEPLAADDEFVKKFAAVKQANKVDFSNYAKREYGFDIDP NTMINTMVKRLHEYKRQALKILAVIARYADIKSGRIAADDVMPRTIVFGAKAAPGYYLAK QTIQLINNVARVINNDPDVKGKLNVYFPWNYNVRLAQHLIPATDLDEQISQAGKEASGTG NMKFALNGAMTVGTLDGANVEIRERVGAENFFLFGMTVDEVDALYAEGYDPKKYYEADPR LKAAIDMVADGTFSNGDKTVYEDLVHDWLTKDWFMTLADFGAYTAIQSEIEALYAQPLEW NRKALINVANSGYFSSDRSMEDYLERIWMTGPLK >gi|222441569|gb|ABXX02000004.1| GENE 51 63203 - 63424 410 73 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0127 NR:ns ## KEGG: BBIF_0127 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 61 1 61 73 108 91.0 6e-23 MENKSSNGWKFFALLFGALLAGVVGLYVYKQQNPDYDPWEEPWENSSSPVDLGLTKDAED GEAEVAPATPEAA >gi|222441569|gb|ABXX02000004.1| GENE 52 63611 - 64405 691 264 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 27 246 66 264 284 107 33.0 2e-23 MAYQRFSLFPDSPSFKDFFSARSMRYRWRNGDPVITVTIMAICVAVWIVETLLKIVWPTG CNAFVGSGVFMPALATHRPWTFITSMFLHQPASLWHILFNMLTLWCVGPVLERMMGHLPY LALYVLSGLGGSAGMMVWALFSQDGWLTSAYGASGALFGLFAAILVVYQRIGIDIRSMLI WMLINFLMPIITPNIAWQAHVGGFIIGGVFAWLLVSGLHALRGKSLQQRTLMYGVIMLAV IIAIVVACNMSNPLRANPLLGMFF >gi|222441569|gb|ABXX02000004.1| GENE 53 64784 - 66199 1451 471 aa, chain + ## HITS:1 COG:no KEGG:BDP_0033 NR:ns ## KEGG: BDP_0033 # Name: not_defined # Def: putative N6-adenine-specific methylase # Organism: B.dentium # Pathway: not_defined # 3 471 10 455 455 618 64.0 1e-175 MTIMNDETREFVAMHRNEDVRELALKAKRVEGLDLPLALDQIAGWQIARKKLPQWASCEG IVYPPHISMEQCSSQFTAQYKSEVAQTLLAPAATVRARVSDSGESDNQTTKSEPQLSDSA ESVMQTAKSAFQLSDSPESDTQEMKMGAWMSDSPESDTLVARRAMVDLTGGFGVDFSYLA RGFSQATYVERQRHLCDLAEHNMAALGLDQARIVCGDGVEYLRQMGPVDFIYLDPARRDE HGSRTYAIEDCTPNVFELRDLLLSKSQYTLVKLSPMLDWRKAVADFDGTVREVHIVATGN ECKELLLVLGQQVHEEPSAPRVFCVNDNQRIDYDSAAYTQGLRIGGKPLPEVKNYLYEPN ASIMKAGCFDLVEERFGVTQVGPSSHLFVSATPVADFPGRGFAIEAIGGMNKKDIKRLLN GTKQANIAVRNFPLTAPQLRKKLKLADGGPVYLFGTTMQGCDHVLLRTSKI >gi|222441569|gb|ABXX02000004.1| GENE 54 66408 - 66902 761 164 aa, chain - ## HITS:1 COG:no KEGG:BAD_0034 NR:ns ## KEGG: BAD_0034 # Name: not_defined # Def: putative septation inhibitor protein # Organism: B.adolescentis # Pathway: not_defined # 1 164 1 155 155 234 80.0 8e-61 MLMADEELHETTADDQNDLQSTDDTAAVEESNETVQDAAEETTVDSTSDESADSDDDDDH DIPMDRVEAVLNATADKDSLSPQMQRMMNRQAENTRRVEETIKGTKSNPRWFVPLFCALM IIGLIWAVVYYLTSDYPIPNIGAWNLAIAFAIIMIGFIMTMWWR >gi|222441569|gb|ABXX02000004.1| GENE 55 67019 - 67822 939 267 aa, chain + ## HITS:1 COG:MT0015 KEGG:ns NR:ns ## COG: MT0015 COG3879 # Protein_GI_number: 15839386 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 49 232 61 239 262 132 43.0 7e-31 MAKHTGKHTAKRSKAAGVAAFLVLMFSGFLLATNLRVNRSVVVTNDTAELVEQRVKKVNS LQTEVDALSSRVNDLSKTLNSQDDADQQDSESAGNGTMLPAVEGPGLVVTLDDSPLWENM VDSSGSTSNINDYVVHQQDVEAVVNALWAGGAESMMIMDQRVLFNSAVRCSGNVLLLQGK KYSPPFTISAIGPVETMKKALDNSQEVTIYRQYVSAFGLGWQVDEKEKLHFDATDALQQP LQYAQAMNNETDGSQQTDETQESQEGK >gi|222441569|gb|ABXX02000004.1| GENE 56 67826 - 68917 1119 363 aa, chain + ## HITS:1 COG:Cgl2874 KEGG:ns NR:ns ## COG: Cgl2874 COG3764 # Protein_GI_number: 19554124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Corynebacterium glutamicum # 20 173 6 147 255 93 33.0 5e-19 MKHVAPKQRRKSVVWTILGILAELMLTAAAVCALYIAWQMWWTGVQAEHNQIETRQSVSW SDPGQSDSVTIAQAQEGDPPTQPQSAQEGELIAQVYIPRFGSQWQRNLVEGTSLTELNKH GLGHYKDSQMPGQVGNFAFAGHRNGYGQPLGDVDKLQEGDPIIVRTQDYWYVYHYASYKI VLPTDIEVVAANPENPGATPTKRMLTMTTCEPKYSTPTHRWISYAEFSYWAKVSDGIPQE LASTDSNGKVKFVNNEKSSIVASVSSLKPWILGALAAYAIIFLSALVAWRWPYLADVRAG RREKPEFSLYGGLMRLQPGVLPIRLVLMALLIFAAAASCFEWLFPWAATNIPALQEMSNY TAI >gi|222441569|gb|ABXX02000004.1| GENE 57 68930 - 69163 64 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352412|ref|ZP_03743435.1| ## NR: gi|225352412|ref|ZP_03743435.1| hypothetical protein BIFPSEUDO_04032 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04032 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 77 1 77 77 112 100.0 8e-24 MPSGGLPEGLLAVLLADVKAIAAIAAICDYHDCCDCCVRRAPRHDMLRTYTAMQTQIFAQ RKYSKHSNADIPTLIGA >gi|222441569|gb|ABXX02000004.1| GENE 58 69163 - 69807 894 214 aa, chain + ## HITS:1 COG:ML0015 KEGG:ns NR:ns ## COG: ML0015 COG0512 # Protein_GI_number: 15826878 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Mycobacterium leprae # 6 197 2 193 232 204 49.0 8e-53 MTDSARILVVDNYDSFVYTIVGYLKTLGAAVTVVRNDAIDPGEADVIDEYDGVLISPGPG APADSGASEGMIRLCAEQSKPMFGVCLGMQALAEVFGATVSHAPTIMHGKTSLVEHIDDE IFEGVANPMTATRYHSLAVEPDSVPEELVVTAWTQVDHIVQGIKHCSKPMYAVQFHPESV MTQDGYRLLANWLKVCGQENAVERSKGLQPKVAA >gi|222441569|gb|ABXX02000004.1| GENE 59 69844 - 69999 72 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVQAMVQAWKRKSRNLNRKKIQNRKKTRIAKEHKTVMRKAQLAFQLGLPCE >gi|222441569|gb|ABXX02000004.1| GENE 60 70019 - 72106 2560 695 aa, chain - ## HITS:1 COG:Rv0014c_1 KEGG:ns NR:ns ## COG: Rv0014c_1 COG0515 # Protein_GI_number: 15607156 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 13 469 10 425 428 306 42.0 9e-83 MNINMPTSLAGGRYQLGQLVGRGGMAEVHVALDTRLGRTVAVKIMRADFANDKIFLERFR REAHSVAQMNNPNIVNIYDSGEEVVATETGQTEHLPYLVMEYVKGQTLRDILKVNGALSQ RDAEQVMMGVLNALEYSHRMGIIHRDIKPGNIMISEQGVVKVMDFGIARALDDSAATMTQ SQGVVGTAQYLSPEQARGESVDMRSDLYSAGCVLYEMLTGRPPFTGDSAVAIAYQHVSEV ATPPSSVVPGLPKMWDSICAKAMAKDRQNRYATASEFKNDLLTFMNGGVPMAAAFNPLTD LTNMKARKQAEMDANTVAMTPAGETAATQAFNPVTGQFEAVPNPQNGVSTKTRAEQRAEA AKARKKKQIIIGSVVGGLVALLVILGVFFMLNKSDSTADMVEVPDFTATANISEARVEEQ LAAKGLKLDAREDSDSSEPKGTITKQNPAGGKKVAKGSTVSVWFSTGPQSVAVPDVSNKS QDDAKSILEAAGFKVGNVRTVDNASIEKDKVVSTDPAAHSKQTKGTIITLYISSGMTKIP DNLIGQPKDTVIEQLKQAGLTQITIESEYSDSIASGAVTRVEPGVGSTVEAGTAVTIWVS TGKQQISVPSVVGMGYAGAKSLLESYGFQVTVSGPEDGTVTGMSPTAGTQSDSGATITLT TKSSSTNNGGNNGNNGGNGGNGGNTDGGNNTPEGN >gi|222441569|gb|ABXX02000004.1| GENE 61 72103 - 73047 916 314 aa, chain - ## HITS:1 COG:Cgl0042 KEGG:ns NR:ns ## COG: Cgl0042 COG0515 # Protein_GI_number: 19551292 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 7 271 14 281 469 195 42.0 1e-49 MKLIEGQLIHRRYRLDARLAQGGMGEVWKGYDIQLGRPVAIKALRGDLGVTQEAKLLRLR AEAHNSANLAHPNIAALFEYYEHDGIGFLVMEYVPSKSLADLFHEQNGPMEPTRLLPILI QTARGLFVAHSHGVIHRDVKPANIMVSDSGEVKITDFGVSYSTNQEQITQDGMVVGTAQY ISPEQAQGQHATPQSDIYSLGIVAYEGLCGHRPFTGATPVDIAAAHVNNPVPPLPDSVDV QLREFVMSMLSKDPLDRPKDALTVSRTLSRIERRLLDQQTQLADTMVVPTGGRLPRRVVS RPHISLSTDGKEQG >gi|222441569|gb|ABXX02000004.1| GENE 62 73044 - 74510 1778 488 aa, chain - ## HITS:1 COG:ML0018 KEGG:ns NR:ns ## COG: ML0018 COG0768 # Protein_GI_number: 15826881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 1 486 1 488 492 295 38.0 1e-79 MNKSLRQLFTIVVALFVILGMSTTIITAIRANQLNNDPRNTRALYHEYGAPRGAILASDG SVIAKSDPSNDAFSYQRSYTAGELYAPVTGFFSISQRGWNGIEASRSSLLSGQSDQLVWQ RFKSLFTGQENKGATIETSIDPKIQQAAYNGLANNDGAAVAIEVKTGRILAMASTPSYDP NQLASHDTSEANGNYSTLSQDESNPMLNRATSQLYPPGSTFKTVVAAAALETGEYQTDTE IPAGSSYTLPGTVTQLTNAVSQADGSDGKITLEDAMAYSSNTAFAQLGVALGDDKVSSMA KKLGFDSPITVDGSDSTGTPWMSVASKFPTDTTDDKLALASIGQGDTVVTPLQNALVAAT VANGGKVMQPTLVDRVRSSDLSVISQTKPQVMSRAFSSGTANKLTQMMEAVVTKENPNLA IDGVQVAAKTGTAQIGDGNTSIDGWVVGFAPADDPKIAVAVVVHNVDLYGSFAAGPIMKA MMQEALAE >gi|222441569|gb|ABXX02000004.1| GENE 63 74507 - 76030 1600 507 aa, chain - ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 11 432 25 447 469 323 44.0 5e-88 MMATRLKQFGLLLFSMLICGVAFFQMFERTTGGFPQNYLWMLAFVGALFLTSWGLPLRFQ PYANQAIMCCVMVLTGTGIMMIARIDQDSNTSVAFKQLLWLSIALVLANLLVIFMKDYRV LRRFSYVSMVIGLVLLLSPMLPVIGSEQYGARIWVKIPGLGSFQPSEFAKLFLAFFFASY LYDHRDQLAVGGKKVLGLQLPRIKDLGPIIVVWIVSMGVLVVQHDLGTSLMFFAMFVSML YVATGRTSWIVIGFIAFAVGAFAAANIFSHVGARVDAWLHPFDSAQYNKEYGGSYQLVTG IFGLASGGLMGTGLGQGHPSLTPIANSDYIYAALGEELGLTGLMAILMLYLLIIAAGMIT AMKIKDGFGKLLASGLVFTMAFQVFTVVGGITLVIPLTGLTLPYMAAGGSSLIANYMLAA LLVVISNSANKPESDIDSDTFQYEAMQALRARKQSRARRSVASAQASAQATEIISTETPV SGTPVVPPAPPSGTPNVSDSMSEGSQA >gi|222441569|gb|ABXX02000004.1| GENE 64 76027 - 77598 1782 523 aa, chain - ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 7 236 11 234 237 192 46.0 2e-48 MYSTVVSDVGTVRSNNQDSAFAGEHLIAICDGMGGHAGGDTASTIAIRSLAHIEQDNVQG DVQIIAHMMETSVMAAHDAIVGKAKRERRLAGMGTTVTSVALVAGYWVLAHIGDSRAYLL HDGRLIRMTSDHSYVQHLIDTGRISEAEARNHPQRNVVMRVLGDFDIDSSPDIAIRKAHP ADRWLLCSDGLCGVLEDSTLQEVLSACSDQEECAQQLVSMALRAGSTDNVTAVIADATLA LDADAFDLPHQTPLVGGAASASLEPIADIINEPVASAPALREGKKSPAARAAALRNGKNP NEDDNPPEQRVAQPSTVREENGDRTNPDTGEIPVVQKDDGRISADPNDPEVAKAIRNEHI EQRKTKRTRTRRNRVIAIIVTIVVLLGLAGGAFATYRWSQTKYYIGDDNGEVAIFQGVPT SLFGFQLSHAVTDTHMKTSELPPSWQEQLAQGISFDTYGEAKTHTRLIKKQLKQQQDEAA QKEQDKANGESDNKSSGTTSDKSSGKSDKSDDASANKSGGDQS >gi|222441569|gb|ABXX02000004.1| GENE 65 77637 - 78152 411 171 aa, chain - ## HITS:1 COG:Cgl0046 KEGG:ns NR:ns ## COG: Cgl0046 COG1716 # Protein_GI_number: 19551296 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 10 170 9 152 154 76 33.0 2e-14 MLTELTFAILKYGFLVLLWIFVACTVRSLYRDVETLSPRKSRAHRRKERRARKAVEAPAP VAVPAPVVSATSSAKPTLLVIIDGPLAGSSVPLSGNTITLGRSASNTVVLDDEFVSSHHA RVYTDPATGKWAIEDLGSTNGTVVNQQRLNAPMILGSRVPVRIGATTFELR >gi|222441569|gb|ABXX02000004.1| GENE 66 78180 - 78887 932 235 aa, chain - ## HITS:1 COG:no KEGG:BAD_0044 NR:ns ## KEGG: BAD_0044 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 235 1 235 235 435 92.0 1e-121 MSVLDRFEKSVEGAVNGVFAKFGSKDLQPVDLSSALEREIDKEAMPVTRDRTVAPNEYRF KLSTPDFNNIVEWGAEALANELADNLTQYAKDQHYAFVGPVVVIFEEDLDLTKSNFKLTS ESVQGNTVPVTTDAQTEDCPMLEIGEHQYLLTESKTIIGRGSDCDIVIDDPGISRRHMQI DITDNGNTVIARDLGSTNGMYVEGHHVEAATLLDGNTITIGRTRILYWASSQDQE >gi|222441569|gb|ABXX02000004.1| GENE 67 79096 - 81498 2392 800 aa, chain + ## HITS:1 COG:CC2154 KEGG:ns NR:ns ## COG: CC2154 COG1506 # Protein_GI_number: 16126393 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Caulobacter vibrioides # 462 759 409 694 738 113 32.0 2e-24 MTDAIRQFPRKKARTLRFSCGAPRSARVIADGSRALFLRSDGPEDTVTSLWMSVIDEDGN IGEIPLADPRVLLADADAEDVPAEEKARRERAREGGSGIVSYCVDGAGNRVTFTINGQLF LTDLTAGATRAITIEEDELKPVLNPRISPDGRHIMYTTGTYLVDVDLANDEETGDAISVV ASAPQNGEWKIGLAEFAAGEEMDRYDGFWWSPDSKYVLFETYDESPEPIWHLSDPANPTN PAQANRYPQALTANADVRLTLLELGYDSDNCCYGAIANEVQWDHESYEYLAAVSWSEGHD PIILVQDRLQQHDQVLAIHVGEPIATMRDAENGFTDDNGDEVETFSIAIPEYAEGERPGT TRVLEEHGNDYWLDLIHGTPAFTPDGRLICAMNDMDVDTNRLTVDGTPFTPAGLQVREVL DVTDDDVLCVVQRTPEILPESDLPFLWQSNASDHDARSFDVVSIRYDGTWEPLTYAPGQW SMSRAGNGCVVTGRGMDDATVQMQHCMNIATTDENGTDVASMVVAPIENHAETPGFTPNV HFTRLGERELYTAIVLPSSDSEYAHEAILPVLMKPYGGPGFQQVIESQSFYWDAQWWADQ GYIVVTTDGRGTTGRGPQWDRAIYETMKSVTLEDQIDAVRALPEALEALAGENAAANVPQ PDLSRVAMIGWSYGGFLSALAVLEAPETFAAACAGAPPTDWTLYDTHYTERYLGLDSAVY ERNSIIADAPQLDRPLMLIHGFADDNVTIAHSLRLSQALMATGRKHTFLPLTGITHMTND ETVAENLLILQRDFLAEALG >gi|222441569|gb|ABXX02000004.1| GENE 68 81788 - 83065 893 425 aa, chain - ## HITS:1 COG:no KEGG:BAD_0046 NR:ns ## KEGG: BAD_0046 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 419 7 423 429 372 48.0 1e-101 MRSKPATQYIAWRNRMRTQHPNLWHPIRFAIMLIVLAWTIYGVCYEPPTDIFGVIWVAML VTALVPSPLFLKSTSVAILVIASIGDLFTPYAHLGNSLPAQLYAYGMLAYSTNAIIVATL LTYYVVNILLIDPPGPNTNPVAMVSMYAMVLLLGRALSWSEKTTQKSFEAAQNKNRLQEL ESRARIADAIHDAVTGDLSAATFVAQRHIGGNSSSPGVAADPANATTTTATATADAEDWR QINEYILSALTNVHRVIDELNMDATTLPGDADGEALANLLRATLDDGDRRLRKLGFNITS IRHCAGGKPSASQAIAELANNLLREIYANIARHAAPGSKVDLSVMLRPNAIEITQINPMK EDMAGADERDDELPGGHGLASFKKQLESYQGTLTTSAQDGSWTLFAYIPVTVIDDSPGLL EQVQV >gi|222441569|gb|ABXX02000004.1| GENE 69 83055 - 83711 459 218 aa, chain - ## HITS:1 COG:PM1810 KEGG:ns NR:ns ## COG: PM1810 COG2197 # Protein_GI_number: 15603675 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Pasteurella multocida # 12 212 6 203 209 75 30.0 9e-14 MTTSEKHPKIHRIALVDNDPRALDSLSAVIASKVPTAYVVWTATSGGEAIERCQDANGHV SLLILDMSMEGLQGPATCHRLRLMGQRMPILGATSFSINSYRDKLVEAGAQGLVGKENAD QLAQIIMRMCNGEVMEGFEPPALANLRISREADTTPALTVREEQIISLCAEGMLDRDIAE HLGISEATIRKHMQSILRKLNCKTSRQAVALWVRSNAL >gi|222441569|gb|ABXX02000004.1| GENE 70 83719 - 83952 137 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352425|ref|ZP_03743448.1| ## NR: gi|225352425|ref|ZP_03743448.1| hypothetical protein BIFPSEUDO_04045 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04045 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 77 1 77 77 149 100.0 8e-35 MHQRRTGTTESSPPRAILAYYGGMKFVSLLMVVTLSLTGTPTYAHAAATPVDNNGDISAA KDSNCPTWLQWLCGKGK >gi|222441569|gb|ABXX02000004.1| GENE 71 84025 - 85095 797 356 aa, chain + ## HITS:1 COG:CAC2246 KEGG:ns NR:ns ## COG: CAC2246 COG2267 # Protein_GI_number: 15895514 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Clostridium acetobutylicum # 76 347 91 359 363 154 31.0 4e-37 MTITLIDEARYDAEMDETVLPALRNCMTEGWMEPATVDWDDNMLPKLEHPGRLHYYCYDA HKFDALREDGASGVFRGAVVISHGFTEFGRKYSEMVWYFLLAGYSVCVFEHRGHGHSTHD MSNPSLVWIDDWRRYVADFATFAQTVGRETAGDGPMYLYCHSMGGGIGAAVLERYPSLFD KAVLSAPMIAPVVGMPTWIARIVVGVICGLGFGKSRVFGHADFDGNLNLDDYHGASEARI RWFHKQRLADKSCQTNAATFDWANQAMALSRAVLKPDMCGAIESPVLLFQAGRDVWVLNG PQDDFVERVSEGGGFIEKVRYSQSLHEIFSMPNAVFGPYLDKILDFLAASNASLAE >gi|222441569|gb|ABXX02000004.1| GENE 72 85194 - 86177 1288 327 aa, chain + ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 42 326 7 291 301 136 30.0 5e-32 MAKQTSGQTSQSQKTSESQKTAKKTAKKTEHMLEQTPKSLLIGTGMTLLGGAMWGMNSTV AKLLMRDYQLDPIWLSCVRALFASLIFLVGSAITTPQKLAGAVKDVKSYPKYLVTTLICV LLVQVSYLMTIDWTNSGTATVLQTLNLIFVLAWVCLRGKRLPLKRELVGVLLAFAGTFLI ATGGNFASLSLPWQGLAWGLVDAVSTAAMSILPVMLMLKWGNMTINGITFLMSGLILCPF AQPWANIPALDARGMLLLLYTIVCGTFLAFWLYMAGVMRVGAVRATMLGTSEPVMATVTA VAWAGEAFTFTDLTGFAMIIIMVFLVR >gi|222441569|gb|ABXX02000004.1| GENE 73 86261 - 86482 218 73 aa, chain - ## HITS:1 COG:no KEGG:BDP_0054 NR:ns ## KEGG: BDP_0054 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 18 56 164 202 209 66 79.0 3e-10 MPNPFHLSLVVSADCTEYGLAGEEFTVNAAGQSYISYADYAIAVVDEAEQAAHVGEPSPC TPSSTSFSCAVHV >gi|222441569|gb|ABXX02000004.1| GENE 74 87131 - 88498 1289 455 aa, chain - ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 46 451 6 415 418 477 55.0 1e-134 MTSLTESSTDTAQDTQNAATAVSENLIEHPRGAEPGKPGRRDAFYFEQKTRLPDAADGKG RGGARYGRTGIIHTPHGDIHTPAFVPVATQAAMKAVLPETMKDLGAQCLLSNAFHLYERP GEQVLDEAGGLAKFMNWNGPTFTDSGGFQVLSLGAGFKKTLAMDVTGMKSDDVIAEGKER LAFVDEDGVTFKSPLNGSLHRFSAEISMGIQHKIGADIMFAFDELTTLMNTRGYQERSVE RTYRWAQRCVAEHKRLTEERVGKPYQALYGVVQGANYEDLRRHAAEQIASLDFDGVGIGG AIEKRIIGDTCAWICDAMPESRPRHVLGIAAVDDIFACVENGGDTFDCVAPARCGRNGAI FTRGGRYNIKRAQFKHDFGPLEEGCDCYTCTHYSRAYVDHALRAREFNGFTLATIHNEHF FVKLLDDIRASIDGGYFNEFRDETLTRFYANGSRG >gi|222441569|gb|ABXX02000004.1| GENE 75 88773 - 90758 2320 661 aa, chain + ## HITS:1 COG:VC0566 KEGG:ns NR:ns ## COG: VC0566 COG0265 # Protein_GI_number: 15640588 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Vibrio cholerae # 324 615 93 378 456 180 42.0 7e-45 MAEENDQNAVQPQNDEQQTVPMPPVDAEQTQTYAGEPYAAESATEPIDVQGGIEDQPTAA MPVANDGASAESAAAAGDTPDYASAADERTVVGGSTQDAPAQQYRPAPEYGAYGPVPTQP ADGTAAANDTANGAPNIPPQPQYGAYGQAPQQPQRPRNPFFGNPYVGGNQQNDQQNAQSN NGNPFMKPAAQGGANVPPAAPNTPNNGNPFGNPNNGNPFGAPQQNGAATKPKSASGVTGH VMTGVVAALVSAALCLGVGYAAITNGWVTVPTSSSLTSVKSNTSGSGSAKAKSGEAADWS AVAKEVSDSVVSIDVATSDGSAKGSGAIISDKGYIVTNNHVISGAKQIQVTLANGTIYSA QIVGTDTTTDLAVIKLDNPPSNLKAAEFADSDNLAVGESVMAIGNPLGYDDTATVGIVSA LNRPVTVSDDNNNDIVTNAVQIDAAVNPGNSGGPTFNAAGQVIGINSSIASTTTSSGTAG SIGIGFAIPSNLVKRVANEIIDNGTVQHVALGVTIKSSTVEADGVTRGCTQVQSVVDNSP AAKAGVKAGDSIVAFNGKAVNNNYSLLGYVRASAMNDKVTLTVVRDGNTMELDVTLDQEE SQTNSANSQNQRNNGNDGQSQNGNGNGYGNDGNGNGNGQSDGNGSNGYGDGGGLFDPFGL W >gi|222441569|gb|ABXX02000004.1| GENE 76 91138 - 93672 2301 844 aa, chain + ## HITS:1 COG:Cgl0475 KEGG:ns NR:ns ## COG: Cgl0475 COG2217 # Protein_GI_number: 19551725 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 69 508 64 419 650 195 33.0 3e-49 MRRIIDICWRLCKQVPLLPITILSAIPLALLGEWKPWGEAAWDSWISQVGVDGLSAFNPG VGQWIVIALVAYTIVVTVRGMIDDLRHGHVGVDLLAVVAIASTVAVQEYWAAWAVVLMIS SGEAIEEFAQSKAESNLTALIDAAPRTAHVVVLPGMRGHVHASGSEHTADVTADGFRTVR VSDSGETDNQDGEKRAFASESPETDTKGASQTYDAAGERFETVPVDQVQLGDVILVLPGE TVPVDGELLSGVATLDLSNINGEPVPREVYAGARVMSGAVNGSTTLTMRATQLAHDSQYQ KILELVSSAQESRPAVVKTADMLAVPFTVLSLAIAGIAWVVSGLPLRFAQVLVLATPCPL LIAAPVAYVAGTGRLAKAGILIKAQDVLENLGRVSHIFFDKTGTLTVKQPQVVRVEKPFG TSSPFNEDHILMMAGVVESYSVHILSKGIAAAGRKAMDDLYARYASGQRLCAERDLPGHG RDYPVVKNIVEDSGKGVSGEVNGHRVRVGRFAYATADESGFMPVLHMPNATYHVSDSPES DNQTGEMYARMSDSPETDIQRTEMRAYVSDSPESDTLGTRGGVSGEGRSTVVAPSVSVAA AQTASARKPETVGSLFAPLAPDEMAAYVAIDGKLAARIVLRDVPRANTKRSLARLHELGI KELSMLTGDKAASARIIANEVGIDDVQSELFPEDKVAAVKNATESMRQNQSMPARIIQRI TGESKNRQVTMMVGDGVNDAPVLAVADIGMAMTDGTSTAASESAQVVIMNDDIASVPRAI AIARRTKNVMLQAVLIGLGLAIIGMVAAAFNLIPVVVGAFMQEVIDVVSILWALTVLFDR GESA >gi|222441569|gb|ABXX02000004.1| GENE 77 93715 - 94725 818 336 aa, chain - ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 3 333 6 336 338 238 39.0 2e-62 MRIHITYTGGTIGMIDSPNGLIPGADTRGWLFRLLEDAHMDASLFTFTELDPLIDSSNAT PDNWQTMVDDLRAHHDDADAFVVLHGTDTMSYSSAALSYALADFGKPVIFTGSQHPLGKI ESDATANVTGALNAAMSGRFHGVGLFFGHHLFAGNRVSKSSSWAFEGFSAPSVGPLARTG TPWHWYAGDAASAGYGWTSPQPYSRHDVAVIDMAPGISAARLEAMLTPRPEAVLLRAYGV GNVPSDEPGLTDVIADVLHDGVPVVIASQCQQAEVLLGHYETGDAIARAGAIGSGDMTLE ATYAKIMFLLSQGVTRVDFGKWMRVSIAGEISPSSL >gi|222441569|gb|ABXX02000004.1| GENE 78 94946 - 96445 1796 499 aa, chain - ## HITS:1 COG:YPO1937 KEGG:ns NR:ns ## COG: YPO1937 COG1113 # Protein_GI_number: 16122183 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 9 472 6 472 508 475 51.0 1e-134 MSNSNTSSNATQQSSAQKQDKSDAGYAKDLKPRHIQMIAIGGSIGTGLFLGAGGRLVQGG AGLAIAYAVCGIFAFLMVRALGELAIRRPSSGAFVSYAREFLGEKGAYVTGWLFFLDWSV TVMADITAVAVYFHYWKAFQGVPQWLIALCALALVFVLNLLSVKMFGEAEFWFAAIKVAT IISFMVIAIWAIVTGAPVGDAHAGVANITDNGGLFPNGIAPVFALTLGVVFAFGGTEMVG VAAGEAKDAEKVLPKAINSMIIRIFVFYVGSVVLMALVLPYTAYSSNESPFVTFFSGIGI PHAGDVIQVVVLTAALSSLNAGLYSTGRTLRSLAVAGSGPRFAARMNKHHVPYGGIIITS ALGLIGVVMNAVLPADAFEIVMNLAGIGIAGTWAAILVTHLAFLKKVKTGEEIRPDYHMP GAPYTNYISLIFFAVVVLSNLTSAAGRWTLAMFVVVVIAMVAGWFYMRGRINGDLMDEML DNNGNDVPDVLETTEVPGK >gi|222441569|gb|ABXX02000004.1| GENE 79 96438 - 96545 85 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVIRPAFTKQLPPENCDVQSKIIKEIREKNYYYE >gi|222441569|gb|ABXX02000004.1| GENE 80 96931 - 98385 2127 484 aa, chain + ## HITS:1 COG:Cgl2757 KEGG:ns NR:ns ## COG: Cgl2757 COG0493 # Protein_GI_number: 19554007 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Corynebacterium glutamicum # 4 478 2 446 457 358 44.0 1e-98 MTETNELRIAVIGAGPAGVYSSDIFLRQLKKLGEELGLGTAARIDLFEKLPVPFGLVRYG VAPDHPSIKFIASALEKTLDNPDIHLYCDVEFGKDVTLDELLERYDAVLFATGAVEDKPL GLPGADLDGVYGAAKFVEWYDGYPTGAREWPLEAEEVAVIGGGNVAMDVARELMRNADDL KERTDIPDNVYEGIKANKARVLHLFIRRGVAQAKFSVQELREMEKLPGVQLIINEDDFDL DEDTIEEAGKDKLTRQMVEELFTIREMAEDMEDDGDVDYEGNTADRKYYVHFNSAPVEVL GEDGKVVGIRVEKTETSADGKMSRTGEFEEYPVQAVYHAIGYKPATAPGIAYDERHAHLA NANGDGRITTTASAEDGAQVRERLYATGWAKRGPVGLIGSTKSDALLIVTNMLEDLSKAA EGGRVAADRDPESIDRLLASRGVKPIDFAGWKKVDAYERADGAKEGREHKKVIDPEQMRA LAHA >gi|222441569|gb|ABXX02000004.1| GENE 81 98579 - 99679 933 366 aa, chain + ## HITS:1 COG:ML2278 KEGG:ns NR:ns ## COG: ML2278 COG0501 # Protein_GI_number: 15828221 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Mycobacterium leprae # 8 295 4 283 287 261 50.0 2e-69 MNGKLQVHGHCNGLKTTLLFALMWGVIMLIWWATGGSQRTLGIYILIGLGSTFASYWFSD KLAIASMRAQEVSEQEAPVLYKIVRELSAKAGKPMPRIYIAPTMSPNAFATGRNERHAAV CCTQGILQMLNEREIRGVLGHELMHVYNHDILTSAIASAMATVISYLGYSLMYFGGGNSR DDRNDSSSNGLGLLGVLLSTILAPIAASLIQMAISRTREYDADEDGSMLTEDPEALASAL NKISNGAETMPMQKTAGTQSVAAMMIANPFSAEGFSKLFSTHPPTSDRIARLMQMGQEMR QQGVQSGYLAGGYATSGVAAADIRQGGRSAMAGAGGPQFGTQYGPGHDSGGSAGRYSRDY SQRPRG >gi|222441569|gb|ABXX02000004.1| GENE 82 100089 - 100592 333 167 aa, chain + ## HITS:1 COG:SAP028 KEGG:ns NR:ns ## COG: SAP028 COG1396 # Protein_GI_number: 16119228 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 1 67 1 67 79 70 44.0 1e-12 MSFKENLQYLRGSRNMTQEQLAMLLGVSRQAISKWESEKAYPEMDKLLMLCDMFGVTLDD LVMGDVRASAGCGGAGRVDLAADTDGVAASVGVADAAVGAVPGVIGFAASQVAGMSDSGE SDVRDTNPNVCASVSGESDAQGAKTGVQLSVSAGSDMRGGRQVGWNP >gi|222441569|gb|ABXX02000004.1| GENE 83 100589 - 101545 763 318 aa, chain + ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 29 318 6 292 293 196 42.0 6e-50 MNTDQKLPAESAGERPSNPLFGHAISHAATLIGLFAIVLWGFMAGLVRLVSESFGATLGS ALIYTVGGMLLLIVRRPKPISQAPRKYLVAGGLMFIAYEASISLSIGLATTNAQSVEVSL VNYLWPTLLVLMTAAVSHKRGSVSEALPGAIVATVGVAMAVGGENLDVQEAVANIASNPL PYALAFAGAFIWAIYATVTPSMSDGYDGTTIFFCCVAVVLWIIHFVSGDGLPAVAPGIGG YISLLACAASIAGGYACWGYGMLHGSMETLAIGSYATPLFSTASSTLLLGVTLGMPFWIG VALVVVGSLINVWFARRR >gi|222441569|gb|ABXX02000004.1| GENE 84 101688 - 104018 2410 776 aa, chain - ## HITS:1 COG:MTH1858 KEGG:ns NR:ns ## COG: MTH1858 COG1511 # Protein_GI_number: 15679846 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanothermobacter thermautotrophicus # 1 773 1 628 631 259 26.0 1e-68 MKMIWGIFKRDMCHATRNVIAVIVSMGLVVVPALYAWFNIAASWDPYGNTKALKVAVANN DKGYKSDLIPVRVNVGETIISTLHANDQLDWQFVKSDKAIDGVKSGEYYAAIVIPKGFSA DMMTLFSPDIKHAQLKYYLNEKINPIAPHITDQGATTVVNTIDKTFAKTIAQVGLDLASS ILHYSQSPQMAEYMRNLNGNLTTMADTLSGASQQVTSYSQLLGSANDIVDSTGKLLASAT KAGKQAQNALKQGKSGATSLTSAGANVTSSVNTALDQVSDAFDQVAAKVNKAFDALGKDS DTAASQLTTLSEQVSSSESLYDTYITSLNHMHESVEQLPDSDSAKQALLEAIDREITLLE AAKGDSQKLAQQLKDASTQVTQDTAAAERSRKEILNRITSAKQSISNVRDDYATNVKPKI DALASTVSTLISQTDSMITQLSGTADDLDDVTGDVGTNVTSIRSTLGAIAKKLDSSAATV KELITKLETGGNAGDGNSDGGDGDNDASSSDSGESDELRALATANASTLSTLISAPVALH RVSVYPIANYGSAMAPFYTILSIWVGAIILCAMLKVTISDREKAHVLGLGDTLPRVAGPS GPGNASRWGLRLDHEYFGRYAIFALLALLQGTLVCLGDMYFLGVQANHALQFLAVGWLAA LVFSNIVYTLTVSFGDIGKAVAVVLLVMQVAGSGGTFPIETLPKFFQMLYPFLPFPHAID AMHAAMAGSYGNEYLLDMVYLALFLIPSLLLGLVLRKPVIRLNNWVSRNLESTKVM >gi|222441569|gb|ABXX02000004.1| GENE 85 104015 - 106798 3032 927 aa, chain - ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 692 1 676 709 298 30.0 2e-80 MHQVFAIFLRDVKRILKNPVALVVTLGVAIIPSLYAWCNILANWDPYANTGNIQVAVANE DKGTTSTLVGHLDAGQQTVNQLKKNHQLGWHFVPKQQAIEGVESGKYYAAIVLPEDFSSR LIGTVTGKGDRPSITYYINEKLNAIAPKITDTGATTIDEQINTTFVSSVADAVAKEVKEA AGETTGSVKSAQSDVINDLTDTINQLETVQQQLRDTRSTLDKALTTIDSAKQSNIALASE ITNSLDTVGKASDLLSETRTQTERFSNTLVGALDNGSTQLSGLQVNVSNATGTVLSGLNT TQDALDQVSSTMHRINTTTGTVLDGVEKALQASQLDPNSQTYKDLSAQLAEARKQLTFQQ QRIDAFDQDTTAAINAGKNTANGFNDDVTTLAKNGTASMTSARTTITGTVMPNLNTGLDT LSLANGSLSGTLTTLQSTLEQGNGLLDQLSRTVTQTNTTIAGTQTQLANLAKQLNTTRTD VAALSSSAMFQQLSQALGLDASEVGSFVGEPVHLDEQVLYPVKNYGSAVTPFYTNLALWV GGFVLVAIYKLEVDRDEKIRMYTPRQGYMGRWLLFVTVGFLQAIIATIGDLALGIQCEHP FLFILAGIFASFVYVNIIYALAVAFRHIGKAVAVILVIIQIPGAAGLYPIEMMPEFFRRL KPFLPFTYGINAMRGPIGGMYANHYWIDMLSLFWYLPVALFIGLVVRKLALNLNRLFDNR LADTDLMITEHNEGTVEPLRLTETAQQIAEEFPELARRRAIHFFRLYPRLVRWGFLALAV LPFVFLLLLFITRMKLAMLLGWIISIIAIDTYLIVVEYLRERYANYLGKEAMSAEEFRSA ILHENLLFRPGMHYKPMHAIHTRLYAAAHGGSAGHAAGHAAGHAAGHAAGHAAGHAAEHA AEYTAEYAAGNTDGNAGRSLREEGNEQ >gi|222441569|gb|ABXX02000004.1| GENE 86 107020 - 108174 1309 384 aa, chain + ## HITS:1 COG:ML0286 KEGG:ns NR:ns ## COG: ML0286 COG0191 # Protein_GI_number: 15827063 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Mycobacterium leprae # 30 383 1 342 345 397 57.0 1e-110 MERTVGKTERKDGECCHMTSGIGLGDNGGMTIATPERYAQMLDAARRGGYAYPAINVTST QTLNAALQGFAEAESDGIIQVSVGGAAYFSGQRVNDRVTGSLAFAAFAHEVAAKYPNITI ALHTDHCAKQYLDEWVRPLLDHEVEQVKHGQEPTFQSHMWDGSTVPLGENLDIAEELLDK SQAAHTVLEIEIGAVGGEEDGHSAEINDKLYSTPAQGIAVAQRLGLGERGRYMAAFTFGN VHGAYKPGVVKLRPELLDEIQTTVALAIKAGEMPDPAHSLDVASGKPFALVFHGGSGSAP EEIAQAVSYGVVKMNIDTDTQYAFSRAVAGHMFSNYDSVLKIDGEVGNKKMYDPRSWGRE AESAMAARVVEACRQLGSAGKALK >gi|222441569|gb|ABXX02000004.1| GENE 87 108385 - 109671 1717 428 aa, chain + ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 427 1 427 430 576 64.0 1e-164 MPGIVLIGAQWGDEGKGKATDLIGTKVDYVARFNGGNNAGHTVVVGDESYALHLLPSGII SPNVTPVIGNGVVVDPEVLFEEIDGLESRGVDCSRLLVSEAAHVIAPYHRTLDKVTERFL GKHKIGTTGRGIGPAYADKINRVGIRVHDLFNAEHLHDKVEASLHQKNQMLVKLYNRRPI DVDETTDELLKLGERLKPYVANTSLVLNKALDEGKTVLFEGGQATMLDVDHGTYPFVTSS NPTAGGACTGTGVGPTKITRVIGVSKAYVTRVGEGPFPTELFGEDGEWLRAQGHEYGVTT GRPRRCGWFDAVVNRYAAQVNGLTDIVLTKLDVLTGLKEIPLCVAYDVNGERRDDMPTDQ SEFAAAKPIYESMPGWDEDISQIHDFNDLPKTCQDYVKRLEELSGCRISVIGTGPQRDHI IQINSLVD >gi|222441569|gb|ABXX02000004.1| GENE 88 109764 - 111278 1351 504 aa, chain + ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 6 502 21 512 512 302 36.0 1e-81 MAAAGIVVGLVSGLLVVVYRLGIEYGTDASRWIYARIRETPWLIAPWAVAAVAAALAIAW MVGKEPMAGGSGIPQTNGVVICGLKMRWQTILPVRFVGGLLGALFGLSLGREGPSIQIGA SGAQCVSHRLRGRRREDMQEHYLVTAGAAAGLSAAFSAPLSGMMFALEGVHRSFSPAILM GATAASLTADFVSKYCFGLRPVLDFGDIGQLSLEEYVWLIPLGLVAGLVGSLMNRSLLGF QTLYGKLPARSRPMIAIAIALPVGIWLPDVLGGGSNLIDTAEHARVGLGMLCLLFVAKTL FTSTSFGSGAPGGIFMPILAVGSLAGGICGEVLHRFGDLPSDAVAVFAVCVMTGTLAASV KTPITSILLAVEMSGTLTHMLPVAAVAFIALLVSDLLRTKPIYGELLERYVRAQGMQMAI ASHVGSGIMELPLEMGAIADGKRVRDVRWPSGCLIIGLRRGESEIVPRGDTRLRAGDYLV VLFSGEEEREVRPAMRRLCDARLD >gi|222441569|gb|ABXX02000004.1| GENE 89 111194 - 111592 136 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLAAGAVAPACVTSTVSIVCVMGCESSPAVTTSPGDCSCDSIALPLYWPPADSVVPPIG RATTSWAAVAAFLTHMSLHGAPTYALWMSDSADSDIQSPAEFSQAQSSRASHSRRIAGRT SRSSSPLNSTTR >gi|222441569|gb|ABXX02000004.1| GENE 90 111465 - 112559 813 364 aa, chain + ## HITS:1 COG:lin2188 KEGG:ns NR:ns ## COG: lin2188 COG0239 # Protein_GI_number: 16801253 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Listeria innocua # 67 196 3 123 129 67 30.0 5e-11 MESQEQSPGDVVTAGEDSHPITQTIDTVEVTHAGATAPAANTMDPPTIPLAPMKRMQARF NPLADGLMYVVVFVGGFVGVGCRHALDMLLPSVSGTPFVVGTFVSNMVACFLFAMLTEFM ATASWLRRRVRQVVSRGVGLGLLGGLSTMSGVMLETMEGLHERHIASALGYLAGNFAGGL FTAAAGVVLMQALLSRSTRKRVRGAFSAVSVSDSAESDTQGVRHVKVADVARSAAQAAME AAQAAQQAAQAAQQIAQTGQVPRVETPTVPPTASQPMQTGRVPQIPPLAVPQLTQPSQPL LREPDTPDLGQLPEPIQQSQPIQQPQQQSQPIRQPANPLPPSFEPKPITAEISLVADPAT GEVR >gi|222441569|gb|ABXX02000004.1| GENE 91 112559 - 112954 343 131 aa, chain + ## HITS:1 COG:no KEGG:BL0547 NR:ns ## KEGG: BL0547 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 1 131 241 371 371 226 96.0 3e-58 MMWMICLFGGLGAMARYVLDVSIQRGWNRENRRTSRNFPLSTLVINGVASLCAGIAMMSY YSQSVDMGTVMMFVVGFLGGFSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVAT GFGIALLVNPA >gi|222441569|gb|ABXX02000004.1| GENE 92 113599 - 114684 1160 361 aa, chain + ## HITS:1 COG:SP1725 KEGG:ns NR:ns ## COG: SP1725 COG1609 # Protein_GI_number: 15901558 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 4 359 5 320 321 169 30.0 9e-42 MVGMRDVAKKAGVSLSTVSLVVNGNGYVSDDMRDRVRKAMQALNYVPNELARNLYHDRTN LVGVIVPTIRHPFFATFTAHLQHALAAQGLRTMLCSTADEAEGEIQYVDMLRRHMMDGIV MCAHTSHPGDYWTSIHRPIVAFDRVLGDGISSIGSDHEQGGRLIAQMLIRNGAKHVVMIG GPRDQFFDLAARGEVEEGSFDLGKTTFPTVRYYLTLEQELTSAGVKYEYVEAGEVMDFAG YHRAVSNVLDKVTTDGVDAVVSSDIGASFCVREALSRGISIPDELQIVAYDGTYLTDLAG MKLTAVAQDFAAIAQSAADHIVQAIANEEVAAANASRKNIPKPFEPNVLIPMTLVPGDTT R >gi|222441569|gb|ABXX02000004.1| GENE 93 114948 - 116462 2069 504 aa, chain + ## HITS:1 COG:AGpT251 KEGG:ns NR:ns ## COG: AGpT251 COG0366 # Protein_GI_number: 16119953 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 22 455 1 433 464 491 54.0 1e-138 MKNKVQLITYADRLGDGTLSSMTDILRTRFDGVYDGVHILPFFTPFDGADAGFDPIDHTK VDPRLGSWDDVAELSKTHGIMVDAIVNHMSWESKQFQDVLEKGEESEYYPMFLTMSSVFP NGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDKGWEYLMSIFDQ MAASHVSYIRLDAVGYGAKEAGTSCFMTPKTFKLISRLREEGIKRGLEILIEVHSYYKKQ VEIASKVDRVYDFALPPLLLHSLNTGHVEPVAHWTDIRPNNAVTVLDTHDGIGVIDIGSD QLDRSLKGLVPDEDVDNLVNAIHANTHGESQAATGAAASNLDLYQVNSTYYSALGCNDQH YIAARAVQFFLPGVPQVYYVGALAGKNDMELLRKTNNGRDINRHYYSTAEIDENLQRPVV KALNALAKFRNELDAFDGTFSYSADGDTSISFTWEGTTTQATLTFEPGRGLGVENTASVA TLEWRDAAGEHRTDDLIANPPVVA >gi|222441569|gb|ABXX02000004.1| GENE 94 116651 - 117307 852 218 aa, chain + ## HITS:1 COG:no KEGG:BDP_0110 NR:ns ## KEGG: BDP_0110 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 218 1 218 218 329 84.0 5e-89 MSKMSKLFDQDNMFFAIMGVLFDLIILNVLTLLCCLPVVTAGASFTAMHSVLWRMVRHEE TYVARQFFDSFKRNLKQSLLPWLAFLLAAIVLVVDGMLARSMGSMRGPLMACVAFMGLVI IAIAQYFFPLLSRYENPTSETLKNATKLALGFFPRTLCMLVILAAFAVLYAQFFIYMIPL LILMGVTLPQYCCAWIYNWIFRRIDGEIDAKGRKVAQS >gi|222441569|gb|ABXX02000004.1| GENE 95 117627 - 119504 1568 625 aa, chain - ## HITS:1 COG:AGc1051 KEGG:ns NR:ns ## COG: AGc1051 COG0366 # Protein_GI_number: 15887939 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 500 58 525 594 168 29.0 3e-41 MASWLNNAIFYEIYPQSFNDSNGDGIGDFQGIIDKLQYVHDLGCNAIWINPCFDSSFYDA GYDVRDYYTAAERYGSNADLQRLFERAHELGMHVLLDLVPGHSAVDNPWFLESGKDERNA WTDRYIWRPMTQSPNLNSPYESIRGFLGGIAERPDAAAVNCFSTQACLNYGFGTVTEDWQ FAADSPEAVQGRLLIQDIMDFWLGLGADGFRVDMAGSLVKEDPDHYWTKLLWQQVRAHLD ETYPEAVLVSEWGDPEEALHAGFDMDFLLHFGPSHYLDLFRENPYFSAGSSEATGSAETA ETEHDGERSECDGAGSSGCDSNGNSVVDGDNPNCNNDNVGNASGDIKAFADTYTAMLAST AGTPGYICIPSGNHDMIRMRDTLTTDEMKLAFTFLLTMPGCPFIYYGDEIGMRYMHGLKS KEGGYERTGSRTPMQWSCATNAGFSAARPDDLYLPIDADSERPNVASQTGRSDSLLETVR ALNTLRLAHPALQADGGIEFLYAEDHAYPLVYARSSEAGEAERDATDGERSGTAHETSCE TPCETCSKINREAGGERIVVAINPSNTDASCTLPSDYVKLLSGGLAQEISQEPAEKTVLL SIGNPARFDGTQLHVPARSATILPC >gi|222441569|gb|ABXX02000004.1| GENE 96 119844 - 121130 2007 428 aa, chain + ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 15 422 12 438 443 90 21.0 4e-18 MSKFSSWKKAGTAIVATLMTVGMLGACGSSSSSSGTKITIFNSKVEIESQMEDMAAKYSK EKGVDVEVYYSNDTVAAHLATKYASKDPYTISMVDAKDIYSLAEEHAVDLSDQDWVKDTD YAISINGKTYGFPVSIEARGLIYNADAIKQVTGKEFKPENYKTLDEFKDLIDELKAGGME SPTGVMKEDWSLAAHFLPEVYEEQEDPDAFCHELKDGKVDLSSNAKWNSLMDFFDVMKDN NYAKSSAISAEREVTEQKLAEGEIAFMFGGNWDWSVLNQYDYTENMGLMPVPQNTDDGSN EKLVGGGSKYFFIDSSDNTSDEQRQAAKDFLNWLAEDKAGQEFISTDAALISPFKNNEIE ASDPLGKSVKSYADAGKLIDNYNYLPDDHFSVLGAAFQKWLAGEEDRAGLAQDIQDYWKT AKFTGATA >gi|222441569|gb|ABXX02000004.1| GENE 97 121204 - 122094 1080 296 aa, chain + ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 17 296 9 281 281 158 36.0 1e-38 MGSIMKQNKLSYKIGQFLMFGGPATILFFAVVILPFFYGLYLTLTSWDGVSTTKPFVGLE NYKAALADTAYWQSLGRTFIYSVIAVILTNIVAFLLAYLVTSGIKGQNFFRAGFFIPNLI GGIVLGYVWKFVFNRAFVAIAEVATQTDHASLLSTPNGAMFCLILVSVWQYAGYMMLIYV AGFMSVDQSLKEAAMIDGCNKGKAMWHVVIPLMRSSFVQCIFLSTTRCFMVYDLNLSLTK GEPFNQSVLAAMHVYNQAFVYKNYGTGQAEALVLFIVCAVIGMLQVYFGKKGEVAA >gi|222441569|gb|ABXX02000004.1| GENE 98 122094 - 122951 1158 285 aa, chain + ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 19 285 39 304 304 185 43.0 1e-46 MKGQTSTRTKVLHALMIVVLTILLLLFIAPFILVVINVFKTKADINTAPLALIGKHGFTL ENFPRAMDKMNFVTVFGNSAVITISATILTILFSAMCAYVIVRNPSWKFGGMVFALMVAS MVIPFQVLMVPLVSVYGGLLDVLNSRITLILMHTGFSVSLAVFMFHGAIKTNIPNELEEA ASIDGCSKWRTFWTIVFPLLKPTVATVAIIDAMAFWNDYLLPSLVLGRRELYTIPIATQI FYGTYSNDIGLIMAALLLAMLPILILYLFLQRYIVEGVTSGAVKG >gi|222441569|gb|ABXX02000004.1| GENE 99 123283 - 124884 1726 533 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 107 531 1 412 418 62 22.0 3e-09 MTEDNQHNAGEQQTPMQPQPLPGQVFVRPGIDDRPDYEKTLTEETKAALKRLAVQQNPRV PEASNERPEVQQTLINTEGGSPLTAFAHLDAAVPNLESSFLDLRDPMTAPDGTTPTKPQV HRLTAGFALGALLFTAPMAALNSVLIPQTISRLSGTDRVTDLALLSVVGTLLTFLMNAWI SVGSDHSYCPLGRRTPWIIAGTVLTATSVAILSACDFMPLVIVFWLFTLIGHAMVSMPLA AAFGERVPDKFRDRADAWRGVGQAFGQVLGIIAAVSITWAADDSGWDGTTRFAMMVFALC LVVAGVATLLVLPFEGSSSYLPREGVKKGDYFSQYRPPKGAPKFFIAFAARMFAIAATSG IAIYQWYLAQDGLGDVSQVTMFGLSGAAAVMSMMAVAAFVGSLLAALLLGRIARAFKDSR IPAIAACLLFVVAVVLPLTPIDSAMAVALYALFAGFAYVVYDGVSQGLNLATLPDVRSVG RSLAAFSLANTFGSLIGAVVCAIAIAVTGEYLLIFAVAAGCMAVAGVLTLLLK >gi|222441569|gb|ABXX02000004.1| GENE 100 125337 - 126686 2031 449 aa, chain + ## HITS:1 COG:Cgl1432 KEGG:ns NR:ns ## COG: Cgl1432 COG0477 # Protein_GI_number: 19552682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 8 447 16 459 462 375 51.0 1e-104 MSAVEAAAGKAQAMVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPKVFFGDTTNPT VALLASLLTFAIAFIARPLGSLVFGHFGDRMGRKTTLVVSLLTMGIATFLIGCLPTYSQW GIVAVAALCLCRFVQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIGFFLSNGT YFLLETFNDDDAMLAWGWRVPFLLSAVLVIVGLVVRVQMEETPIFRMAQEQKKVVKSPLT EVFKKSWKEVIQATFLVAVTYTLFYTLATWSLAWGTKTVEQGGGDLGFTNREYLLMLMLA ICVFAAFIVISCVNADKFGRKRVIVISSCCLVAFALLFPFLLDPSVVGQRNFAANLLFLC IGFALMGTAFGPIGAFLPELFDANVRYSGSGIGYNLAAIVGAAFVPTIATWLSHHWGVHS VGLYLGVMAVCCLVAVLSCKETKDVDFTK >gi|222441569|gb|ABXX02000004.1| GENE 101 126995 - 128047 1567 350 aa, chain + ## HITS:1 COG:MT3081 KEGG:ns NR:ns ## COG: MT3081 COG0059 # Protein_GI_number: 15842559 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 326 1 328 337 356 55.0 3e-98 MAATIWYEKDADLSVFDGKKVAILGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVEYAKE QGLEVKPVAEAVAEADVVMILLPDQYQAAVYKKDVEPNLKPGAALAFAHGFNIHYGYIKP SEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPDGKTWPLCLAYAKALGALRAGA IKTTFTEETETDLFGEQDVLMGGINHLCDMGFDVLTEAGYQPEIAYFEVFHELKMLVDLA NEGGLNKARWSCSDTAQYGDYTSTVITEETKKRMQYQLKRIQDGSFAKEFMDDQAAGAPK FKELQEEYSHPHLETVGPKLRAMFSWNNQTDADADMAESFNGKIARTQVQ >gi|222441569|gb|ABXX02000004.1| GENE 102 128251 - 128496 126 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352466|ref|ZP_03743489.1| ## NR: gi|225352466|ref|ZP_03743489.1| hypothetical protein BIFPSEUDO_04088 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04088 [Bifidobacterium pseudocatenulatum DSM 20438] # 28 81 1 54 54 109 98.0 7e-23 MTLGTVTDDGNLLTFEDREIAVVLVPDLCSHCTWHSFLCSGVNASRRSGFYHSQMNSRVF VHGFCPANWGLSYSRPFLNKH >gi|222441569|gb|ABXX02000004.1| GENE 103 128404 - 129444 1418 346 aa, chain + ## HITS:1 COG:MT3081 KEGG:ns NR:ns ## COG: MT3081 COG0059 # Protein_GI_number: 15842559 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 326 1 328 337 370 55.0 1e-102 MAAQIWYENDGDLSVLEGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVEHAKE QGLEVKSVPEAAAEADIIMILAPDQYQRTIWANDIEPNIKPGAAVAFAHGFNIHYGYIKP SEDHPVFMVAPKGPGHIVRREYANGRGVPVVVAVEQDPRGDAWDITLAYAKALGALRAGA IKTTFTEETETDLFGEQNVLMGGVNKLVEMGFEVLTDAGYQPEIAYFEVCHELKMLVDLM NEGGLNKARWSCSDTAQYGDYTNTCIDEHVRERMQYHLQRIQDGSFAKEFIEDQDAGAPK FKALQEEYGNVRIETVGPKLRAMFSWNNGKDDDADMATFTGKIARG >gi|222441569|gb|ABXX02000004.1| GENE 104 129586 - 131403 1877 605 aa, chain + ## HITS:1 COG:no KEGG:BDP_0122 NR:ns ## KEGG: BDP_0122 # Name: not_defined # Def: sialic acidspecific 9-O-acetylesterase (EC:3.1.1.53) # Organism: B.dentium # Pathway: not_defined # 1 600 1 600 600 1005 80.0 0 MVTATGPAPGSEMTTSAEPTEDRSTSGVLHVAAIFASHMVLQRNKPIAVFGALDADCAGL EVSAEIRDFDGSVIVQAHAYASKEIKNGFSPWRVMLPAQPEGGPYTLRVTAGNDFIEYYD VLIGEVWLAGGQSNMELELRNSEDAEEALDNCADPLLRFYNVPKTGVINRNAEHAASWQE SSPENSGVMSAVAYYFARKLRDELDSDLPIGIIDCYIGGTSISCWTSEDALNSSESGRGY LARYEQAIAGKTQEQFDLEYGEWQSRSDTWNASIAAAREDDPDVTWDTLTQQYGECPWPP PMTPTSQWRPSGAFHAMLERIVPYSLAGFLWYQGEEDEPYCGSYRELLGMMIGEWRALWS ESLPFLIVQLPQWIDKKVDEGDGDPMLWPVLREAQWDAAQSIDNVFAICTMDCGEYNNIH PVDKRTPGERLGNCALRQVYGMSRIPVYGPTVLGFRCDEGGRVRLFFRYAHGLHFSGTAP DSFGDEFAKSLPSLVRLPERSGFELAGADGVFHPAYAAIFVDCDIDDLVNAKVNVVDYNA TEFGIPINSRSIGTITLATPEVPAPVMMRYAWRSWGPAPLFNDNNLPAHPFKLDLTDHTD SDHAE >gi|222441569|gb|ABXX02000004.1| GENE 105 131787 - 132065 456 92 aa, chain + ## HITS:1 COG:no KEGG:BDP_0128 NR:ns ## KEGG: BDP_0128 # Name: not_defined # Def: mannosidase (EC:3.2.1.152) # Organism: B.dentium # Pathway: Other glycan degradation [PATH:bde00511] # 7 92 821 903 903 100 66.0 3e-20 MFYVKLALSAAAVAVEDGVELTATAKSYVRDLFCMADKVDAKASVAEGMVSLLPGESVVL HIATADAAALAAPGAFAAANVPRSANDPKREW >gi|222441569|gb|ABXX02000004.1| GENE 106 132294 - 133328 1154 344 aa, chain + ## HITS:1 COG:ECs4861 KEGG:ns NR:ns ## COG: ECs4861 COG1609 # Protein_GI_number: 15834115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 4 341 6 341 341 137 29.0 2e-32 MPIQKSKVTIFDVAKASGVSSSAVSYALNGKSGVSDVTRDKVLKVAHELGWKPNGAAQAL AKAKTQRVGLALGYDPKLLSVESYMMELISGLGAELEKYDYSLLVRMAVGEDAKLSIIDD WIATGNVDAMLLVNVELGDPCVALLEEHEEMPVLAIADASVVGNLPSLSSADADAVRRAV RYLYDLGHRQIARVGGPESLAHSYIRDSAFADVASELGMRYRCLHTDYTPETGREATKRL LAFSEHPTAIIYDNDVMALAGLGVAASQGIKVPEEISIMSWDDSLMCTAAYPNLTAMGRD VVDTGKQAAGLLLKLIGGERVGHLMEGPYELRARASTGPAPAAE >gi|222441569|gb|ABXX02000004.1| GENE 107 133359 - 133625 188 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352470|ref|ZP_03743493.1| ## NR: gi|225352470|ref|ZP_03743493.1| hypothetical protein BIFPSEUDO_04092 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04092 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 88 1 88 88 158 100.0 1e-37 MRPCLKRGARALFDFRLRFQISDFDFQSAIPGLFWGLAPFDLWYLSKQSGNTVAILYGVT LAAIAAIGSLLAFILPLSGRSKCAIAIF >gi|222441569|gb|ABXX02000004.1| GENE 108 133641 - 135110 2002 489 aa, chain - ## HITS:1 COG:ECs0116 KEGG:ns NR:ns ## COG: ECs0116 COG1113 # Protein_GI_number: 15829370 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 22 489 11 451 457 394 48.0 1e-109 MSDATVAKKPRETDDVPVPPTLRKSLKNRHIQLIALGGAIGTGLFYGSSESIQLAGPAIL LAYLIGGLAIFLIVRALSEMAVEDPKAGAFSYYATQYWSKRAGFISGWNYWFNYVLVAMV ELAVVGSFVNYWFPNIPKWVSAAVFLVAIAALNLMGVNKFGEFEFWFAIIKIVAVLAMIF GGLYVIIANVPTASGIRASFANWFTVDGGFLPHGLMSRNADGTWTGLLMALVVVMFSFGG TELIGITAGETENPRTTIPKATNGIIWRILVFYICALGVIMAVVPWSTIDGNSSPFVQIF DSVGVHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGRLNKRGVPVGG VITSAIIIAIAVVVVFVWPDFAFNYLMSIATIAAAINWIMIMITEIKFRRVVAAGDGPND LKGLKGQEALDKLAFKLPFAKVTPYVVIAFMLLVVVLMCFSASYRIAVVAGVIWLVVLFA AYQITQKRA >gi|222441569|gb|ABXX02000004.1| GENE 109 135363 - 138380 3114 1005 aa, chain + ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 275 1005 421 1136 1136 308 29.0 3e-83 MAFIKDMVRMWLHAWKRFISIALISLLGVAVLTGIYAGCRDAFLATDRFFDTQGLHDIQV LSTAGLTDDDIAALRKISGVAKVQGERSQTVTVDLNGKKTVTMQEIGTNGIDQPYLQSGR MPEKSGEIAVTRKFIKDSGYKKGDHITVTPQDSASSSVSDSAESDNQTGENGSQMSDSAE SDTQDGKRAARVTDSGESDNQAPSFPTELTIVGVVLDPQDLTNPDGYSGTNAFRSSATSD YTFFAPSDGVTGSMYTAVTILVKGTADKDSFSDVYDDTVSEVADRIDGTVRTNRQKARHQ ELLDAGTKQIDEAKAQTDKQFAAAQQQIDSNRSQLNQQIDQIVNMQAGAAAGSLDETTRE TLRETVIAASPQLAEAKAQLDQAQSKLDQQKKDTERTLQSKQNELEDSIPQVRWYVQDRS QIGGFSSLKSDLESIQSLGNAFPIVFLLVAVMMSLTAMARMVEEDRGLIGTYTGLGYGRL AVASRYLLFALFACLIGGGLGLIAGFLGIPAFLLVVLRGLYVMPDVRLAYDWLYGTAGVA LFVVGVLAATVYACAQEMRQKPASLMRPKAPRAGSRILLERIKPLWNRMSFLGKVTARNI FRFKSRLIMTVGGVAGCTALIVCGLAINDTVAALGAKQYQDVYQYDLMVVANDDDADAMR QKVASDGRVTSSMDVRVESGDLTGDSGSESIQLVAVPDSERSEFGKMVTLQPVRSSWVDG AADTVSLGDDGVIVSQSAASAMGVKAGGMVTLTNGDDMQAEAHVSAVIRSVIGSDVYVSE TYYRQLFDTAASGTSSASSASDSGESDNQNGESGTSNGASSNGQQLVWNAMYAKLKGSGE SQAAYAEKLEDDDAVMKAVSCAHMAESFKFDLMGAVVALIVALAGGLALVVLFTLANTNV SEREREMATLKVLGFFDKEVHHYVNREMMVLTMMGVVLGLPLGRFVGGLLTAALNMPALY FEVECTPLSYVIAAGATMAFALLVQLFVNPVLDRIDPISSLKSVE >gi|222441569|gb|ABXX02000004.1| GENE 110 138552 - 140048 1425 498 aa, chain - ## HITS:1 COG:SA0868_1 KEGG:ns NR:ns ## COG: SA0868_1 COG0475 # Protein_GI_number: 15926598 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Staphylococcus aureus N315 # 4 391 2 395 399 107 23.0 5e-23 MTQELVSLTIIMAVTAVSPIVAQLIPGRFIPQTVLLLVTGAALGPYGLGVIEVNDAVKLL SELGMAFLFLLAGYEIDPKRLAGHQGKVGLVTWIITLGLAGLVVTLLPFFAKQGINGIAT VIALTTTALGTLMPILKERNLEGTPIGDAIISYGTWGELGPILAMAILLSTRTGWQTMLV LGAFLTICLLCAMLPTKALKTGHRLYRFLTENANTSSQTLMRLTTFLLIFLVTISALFEL DAVLGAFAAGFILRYIIPDGSKSLEMKLEGVGYGFLIPVFFVVSGAAINVRAVAGRPALL VAFIVMLMLIRAVPVYVALSLDKRENPLSSHHRVTVALYCTTALPIIVAVTSLAVKVGTM QGDTASTLVAAGAITVFLMPLLGSITYQVADVHPVTAVREIAHTPSDWRTIVHEHAQVRA LLHHQDRLKRMAETLDALEKMGTMGHGDAAHSNAGHGDEYRAELVKRARREIDRQLKELG LDPQLTTQLPHNYRYPKN >gi|222441569|gb|ABXX02000004.1| GENE 111 140053 - 140235 87 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRRSSIFKTKQFRHFAQIVTLIELPPPHKIYKNLTLPQSALWLIMGHHVLEHRHADSLG >gi|222441569|gb|ABXX02000004.1| GENE 112 140342 - 140803 444 153 aa, chain + ## HITS:1 COG:no KEGG:BDP_0141 NR:ns ## KEGG: BDP_0141 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 152 41 198 200 189 65.0 3e-47 MVDGKFTAKERAYLASLPAVESVSASHIRYADSFRIEVMCRYNAGESPAAIFREAGLDPK LIGYKRIERCIARWKKQEERDRRNSKRVDRDDLLVIRHHDLMRDDAQSSATESQDALSKL AQAQLIINQCDELIAKQALRIDELERVLRKLVG >gi|222441569|gb|ABXX02000004.1| GENE 113 140821 - 141993 838 390 aa, chain + ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 194 381 70 250 279 162 46.0 8e-40 MEETAEWHDGRWPSPEEAPMGGRLSLESRFPSFEEAIDVADEMRQRRHARGKTLAMRAIA ALLIVAAICIGGFPAMLQYRSARDLSGTSVRSAHTVAGWPYPQADDAFAAAQDYNKRLAE SGQPILGEAKDPFADVRGGSRASVSDSGESDNEAGESGPQLSDSGESDNQSGAGTGADAG SADAGSASASSADAEYRSLLDSGGGVMGTIRIPKISVRLPIYHGTSESALASGAGHLYGS SLPVGGKSTHAVLTGHRGLVEAAMFTRLDEMRVGDYFYIEVMGRTLGYQVDRITVIEPND TSQLKIVPGEDRVTLMTCTPYGVNTHRLLVSATRSAIPDEIPAENDAVKDARAIGAITGI ATLVVGVLLVWLRRKPWHIRRHAAWWPKRG >gi|222441569|gb|ABXX02000004.1| GENE 114 142245 - 144671 2201 808 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0282 NR:ns ## KEGG: BBPR_0282 # Name: not_defined # Def: cell surface protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 65 594 603 1109 1176 221 36.0 1e-55 MRHAHNEAKPRGSFVQRMVAALAAIAMLGGLGYVTTSSAIAEDDQNPSGDTSTLQPANSK SIAKIEGGDGDQYALHLTASGDSSSSTVTTAVPADIVLVLDKSGSMKNSNRDTNAKNAAT ALASKLLTAANAALPAEQQVQMAVVTFSDRARTTSQFTTSPGAIGTAVSAWPNGGTNWED ALKTANDLSSGRSGVQKHIVFLSDGNPTFRITSYSGCFKWSGFGQGWESHPEYGTQAECE ANNKWLDQSYQWKTDPDGSDGNIHGEGDDDSYGYNYAAALSEANERGNAALYVVKVSADA NKMSDLAKEANAVTGKEYDGTSAENLTKAFEQIYNTITTTAKIRAYSITDTLSQWVDPVD FADVANGADITQYVTVTNNGTTVSGYTAVYNVDDNGNRTITVTFNNGNGMIVDKNETIDV SFKVKPSDAAYADYASKQQYPDTGEANTGNESAGKQGYFSNAGAHLNYCVVTSVNDQESE CTQQTLDYAKPVVQVRLGQITINKVWSDGASKHASDAVTVQLQRTKTGEAAAQAEKVGDP ITLNASNNWTATIGRLQPGYTYSVAETSEDSRYAVSYQYGNAASNATGVDLTKAMVWQSD GNGGNMTATLTNTLKSATLSNVITVQKILEGRDWKAGDSFDFELTADGNAPLPADCAQQA QQSCKVTVAYDADSPDSQHSATFGDITYNAGKADYTYTITEGNGNIAALHYSGAKYQIVV AVTETNGAWTASVKSVTKLLDDNGKNVSESQKIGDPIAFTNTYVAVSALPLTGGTTDRQW LLVGGSIGGLAVLLVGAAGVWNSRKRLV >gi|222441569|gb|ABXX02000004.1| GENE 115 144821 - 146356 2102 511 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0302 NR:ns ## KEGG: BBIF_0302 # Name: not_defined # Def: hypothetical protein with Cna B-type domain # Organism: B.bifidum # Pathway: not_defined # 1 511 1 530 533 198 39.0 5e-49 MKMRKLFAGIAAAATLLGGMALGATSAQADGSGTVVKSDVNFTFTAQDAKQLTNRKLDAY KIADYVQYGTGSNATYGVQTAGTVTDNSGIKAALEAAVAGTNKTVPTDGGDLMAWALAEG VLSVDNSADGAWNNSASRKFVESLKTTTDKLGTAEEVDLGAAANGTSATVTLPTGLYLFV DADYSVGTNGAATPSIAILVGSGNVKDGVLNPLTEATVTIKNQTTTVSKTVSAATASAGQ TVTYTITSKVPQNTQYYSDYAYTYTDTPSAGQTVNLNSLKVKVANAELKKDTDYTVTGGA NGQPFTVAIRSIQTQRAGAEIAVTYNATVTSEEAAGSKAVTNTVVLSDNGAEATDSTTIT NGQFSFTKTDAQGNALAGAKFEIEGQNGASTPSTATATSESNGTVTFKGLADGTYKVTET EVPAGFQPNLKAAFTVTITNGKAVKYTGADIWGLAPSTEVSDNYTYKVKNVKNVTQLPLT GAAGTTLFTVVALLVAGAGVTVALKSRQRVR >gi|222441569|gb|ABXX02000004.1| GENE 116 146682 - 147188 479 168 aa, chain + ## HITS:1 COG:no KEGG:BDP_0145 NR:ns ## KEGG: BDP_0145 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 168 1 190 190 215 66.0 5e-55 MARGGGAFSDEEIQLLRGLPAVANVTRNRITYADSFKQVCTIRYLTGESPTKIFREAGLP PDLIGYKRIERCVDRWKTSAIKSVTGSGNMSDSEIIAQLVNRYEHAFVMRRNLDSITNRT MEHIPVKAQGDDGIDVGTASIIIKQQARRIDELERANAELRGQIAATA >gi|222441569|gb|ABXX02000004.1| GENE 117 147579 - 149093 1796 504 aa, chain + ## HITS:1 COG:SPy1654 KEGG:ns NR:ns ## COG: SPy1654 COG1113 # Protein_GI_number: 15675525 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Streptococcus pyogenes M1 GAS # 26 486 14 453 459 459 55.0 1e-129 MTSENTNSAGSSAAHIKSVESLDQSNEMERGLKNRHVQFIAIGGTIGTGLFLGSGKSIAL TGPSIIFVYIGVGLIMFLLMRAIGEMMYSDPSQHTFINFITRYLGRGWGKFAGWTYWIVL ILTGMTEITAVSTYFVTFFGTFGIDLNSWKWLIELCFLVALTGINLIAVKVFGEAEFWFS MIKITLIVGLIVTAIVMLVIGFSYPATHIEGVDGTVSGATVSLTNITDGFQLAPNGWMNF FMSFQMVFFAYQLIEFVGVTVSETQNPREVLPKAVNELIVRILIFYVGALIAIMAIVPWR NFHENSDGSFGSPFIMVFKYAGLDWAAALVFFVVITAAASALNSLIYSAGRHLYQLASDS ESPAMARLAEVSEHKVPAKAIVASGCMILFSPIINAIPGISGAFVLFASAASAVVIFIYV LTMLAHRKYRQSSDFLPDGFVMPAWQVLDWIAIAFFVLVYVTLFLSADTIGSAIAGLIWL VAFGGYCLLHERFQNRDLKEALPR >gi|222441569|gb|ABXX02000004.1| GENE 118 149221 - 150135 1242 304 aa, chain - ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 52 296 3 248 257 293 62.0 2e-79 MSTENTITTAEKDFAAAPNATLDELVGTTTNTALLPEPDAHAYDEIATGDADPLILGGHK FTSRFILGSGRYDLNLIKATIENAGTQIVTMALRRCRTTENNLLDYIPKGITMLPNTSGA RNAEEAVRIARLAREVCQTDFVKVEIEHEAKYLLPDNEETIKATKQLAKEGFVVMPYMFP DPIAAKRLEDAGAACVMPLGAMIGSNKGLRARDFIEVIIKNSNVPVIIDAGIGRPSQAAE AMEMGADAVMAYTAIASAGNIPLMARAFKKAIEAGREAYLSGLGKVTEDHAVPSSPTNEA DYIG >gi|222441569|gb|ABXX02000004.1| GENE 119 150219 - 150932 708 237 aa, chain - ## HITS:1 COG:CAC2923 KEGG:ns NR:ns ## COG: CAC2923 COG0476 # Protein_GI_number: 15896176 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Clostridium acetobutylicum # 31 235 62 266 266 201 47.0 1e-51 MTFEPSISQAQIDARQHAFDNQPDPTTLVSREEIRAALLDRHTAATQDKLDAAHVAICGC GGLGSTIAVALTRIGVGHLHLIDFDRVDMTNLNRQQYFLKDLGQYKTEALRSNLRQINPF IDITIDTVKVTDENVPMLFGNEDIICEAFDVPENKTMLVNAVLENLPNKKLVSASGMAGF RSSNLVNTRRVSKNFYFCGDGETAPVPGAGLMAPRVGVVACHEANMITRLILGEEDA >gi|222441569|gb|ABXX02000004.1| GENE 120 151060 - 151254 413 64 aa, chain - ## HITS:1 COG:no KEGG:BDP_0149 NR:ns ## KEGG: BDP_0149 # Name: thiS # Def: thiamine biosynthesis protein ThiS # Organism: B.dentium # Pathway: Sulfur relay system [PATH:bde04122] # 1 64 1 64 64 95 92.0 4e-19 MIINGKEENIATPITVAELIESKGLRADRVAVELNGEIVPRTQRAQTQLKGTDTLEIVTF VQGG >gi|222441569|gb|ABXX02000004.1| GENE 121 151663 - 152730 866 355 aa, chain + ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 7 343 10 281 284 115 25.0 2e-25 MNGELAGFTIPRLGMGTMALAIEGRPDRDTAIRTIHAGLDAGVRYLDTAWSYYLPSEPGT GTAKDLGYGEKLVRDALASWNGPRDEVLVATKTGYRRTMEVPAFVAPVSDSGESGTQGAG FGVQMSDSPESDTQGRDSEGCGRRPGEERQHLQAAGSQYGWMADSRPETMIRDAKESALH LGVDTLDLLYSHGPDPAVPYEDQCGALKQLLDEGVIKYAGISRVNNEQIDLARSIIGNGL IAVQNQFSPSHPDPERTMEHCKELGLAFVCWSPLGGFLDAFDHRAYDLFREVAGNHGCSY QRVVLAWELTRYGRLFTIPSARNPQEINDSFAAAELTLTSDELAMLNTSVDARRG >gi|222441569|gb|ABXX02000004.1| GENE 122 152942 - 153433 546 163 aa, chain + ## HITS:1 COG:L131803 KEGG:ns NR:ns ## COG: L131803 COG1846 # Protein_GI_number: 15672890 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 19 127 19 129 154 60 31.0 1e-09 MGFEEELFHELATSTWDKRSRMQQEMAKGAKGEPFAVQELYRKGPLTPSQLAASMKTTTG RVSALLSALEKKGQITRESDPDDRRVVHVDLTEAGRERAERQRESMREAICWIFSQMGER RAREFVELTEEFTTYMSLCMPGKPRPTPEEVAKAFSENTQEVA >gi|222441569|gb|ABXX02000004.1| GENE 123 153541 - 155292 223 583 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 355 564 16 229 245 90 31 5e-17 MLRIVRYLSKAEIVQMLIALVSIVGQIWFDLTLPDYMADITQLVETPGSEMSDIWIAGGK MLLVSLGSVACAVVTGFIAARVGASFSQRLRSLEFKKVESFGPAEMNRFSTASLITRSTN DITQIQMFVTMGLMMLIKAPIMAVWAVCKIANKGLEWTFATGVAVAVLLAVIGVIMSFVM PKFKAMQRLTDNINLVARENLTGLRVVRAYNAEEYQEDKFTEANKELTETQLFTNRSMAI MMPLMNTVMNGLMLAVYWIGAYLIDAAEALDKLTTFSNMVVFSSYSIQVIMSFLLLSMVF VLWPRADVSAQRVLEVIDTDPMVADGVKTAGKPGMEGEIEFRNVSFAYPDSRQAMLEGVN FTAKKGETVAFIGSTGSGKSSLVNLVPRFYDATQGEVLVDGVDVRDYTLKALRDKIGYVP QQSFLFKGTIASNVAYGDTERNDADVKTACDVAQATEFIDKKDKKYDSGIAQGGSNVSGG QKQRLSIARAVYRHPEILIFDDSFSALDFKTDRAVRDALEREAKNSTKLIVAQRIGTIMN ADRIIVLDDGKVVGQGTHHELLDNCEVYRQIAESQLSEDELNR >gi|222441569|gb|ABXX02000004.1| GENE 124 155307 - 157151 2162 614 aa, chain + ## HITS:1 COG:CAC3281 KEGG:ns NR:ns ## COG: CAC3281 COG1132 # Protein_GI_number: 15896526 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 82 611 176 698 706 553 54.0 1e-157 MARGPMGRSRGPVEKPKDFGGVMSKLAKFCRHYIPVMIFALILGAAGTICQIVGPDKLKD MTNEITKGLPAMVHGRPVMHSIDMDAVSRIAWLLVALYVGYALLSYLQSWLMANVTQRTA QELREAISKKINRLPLKYFDKISYGDVLSRITNDVDAIGQTLGQSVGSLITSITLFVGAL IMMFYNNVIMTLCAIGSALLGLVIMGVIMVASQKYFTRQQIALGDVNGHVEEMYTGHTVV KAYCGEEDSIEQFEKYNDDLYVSGWKSQFLSGLMMPLMNFIGNFGYVVVCVVGAVLAMDG KIEFGVIVAFMMYIRLFTQPLSQFAQAFQNLQRCAAASERVFGFLEEPELADESGKKALL GVGVDGKPQPVRGDVEFSHVRFGYDPDKTIIHDFSASVKAGQKVAIVGPTGAGKTTMVNL LMRFYEISGGTISIDGVDTKSVPRWNVHDQFSMVLQDTWVFRGTVRENIAYSKPGVTDEQ IVAACKAVGLHRYIMSLPNGYDTVLDDKASLSQGQKQLLTIARAMVEDAPILILDEATSS VDTRTEELIQKAMDALTVGRTSFVIAHRLSTIRDADMILVMNGGDIVERGTHEELLARNG FYADIYNSQFTLID >gi|222441569|gb|ABXX02000004.1| GENE 125 157212 - 158273 809 353 aa, chain - ## HITS:1 COG:no KEGG:BAD_0096 NR:ns ## KEGG: BAD_0096 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 353 28 377 377 510 74.0 1e-143 MDASVSLVQRMPYTTAFPKALGTGLLVSTARPVSTGLRAKMERLIDGYEHVLSRFRADSL VTRIGNAEHGGHFDFPNWAGPLFDLYDALHDVTRGAIDPCVGEDLIRLGYNPTLSFTVEA DAAERLGALRGRPVWGHDVVRSDSTTLVTHGSVHLDFGACGKGYLVDLLGGLLGGLEPSC VSREPHPQHAMRKDSAHTAGATDFNRENTFPEFVIDAGGDLLVHTSSPIRVALEDPDDSS RAVGVAEICDGAFCASAPSRRHWEVAVDERTHLAIHHLLNAVDGLPAQQMEATWITVQST LVVDYPTAVADGLATALFVADPNELSNTFAFDCATLDADRHATISAGFPGRFF >gi|222441569|gb|ABXX02000004.1| GENE 126 158580 - 160376 2365 598 aa, chain + ## HITS:1 COG:FN1251 KEGG:ns NR:ns ## COG: FN1251 COG0672 # Protein_GI_number: 19704586 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Fusobacterium nucleatum # 195 573 21 406 433 235 36.0 2e-61 MSSRVAQRYATGSYDPCDPRVSASGRLVTLVAALMIALATLFATTAVPQSAIAADDGQTN FDSWTAAAKNIEDQLATAEKDYNDGNYGQAGTDFQTAHWIGYDASNFSKVVNDTISADKQ KELLQQFTDLEGLAYQQDQGDAIATKIDALTAEINATAQTLDANADLANPKEYAKQRAAQ TAEERKKLDAAKKNSSKGKGDRTWSEVANEMTVILDQAYEAAAAGKGDEGATLVNNAYYQ YYEKLGFEKNVMNAISGDRVSQVEYQFKMTRKTMRDGGSDKEIKQLVDDLKSWLVKDAAI LDSGASGNVNGFTKLVTSSAGQAFLILIREGLEALLVVAAVIAYLVKSGNKRFAKWIYLG VVAGLAGSGLVAVLFTFLFGGSGPIQEISEGVCALIATLMLLWTSNWMLNKSSVEAWNNY IRNKTEAVVAGAQSKVESGQGLGLGMVTSLAMLSFLAVFREGAETVIFYESIYSMSQDAH GMWVGGLTAAAVLIVIFLILRFTSVKIPIGPFFLVTSILMAALVVIFAGGGIHALIEGDL IEGTYLSIVPTNDWIGLYPYVETIAAQVIAAIAVVALFVVGFIKKHRMKLAAQAEQAK >gi|222441569|gb|ABXX02000004.1| GENE 127 160466 - 161128 1013 220 aa, chain + ## HITS:1 COG:TP0971 KEGG:ns NR:ns ## COG: TP0971 COG3470 # Protein_GI_number: 15639955 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Treponema pallidum # 52 220 38 204 204 141 44.0 8e-34 MKNKKIAALLGVLLAGSMAFSLSACGNSNDSASDAKSDTSTSNATDSSSDSSADDSSNAG FEEIQVDEKHSDQDVDALTVNAVYFQPIDMEPSGMGLKAADASFHLEADIHANEKGTKLG YGKGDFVPDLTVNYEIINNANNETVDSGTFMQMNASDGPHYGANIKLDEAGSYKLVLKIE SPEKKGWMLHVDPETGVEGRFWTEPLEVTFPEWNYTPQEW >gi|222441569|gb|ABXX02000004.1| GENE 128 161474 - 162745 1219 423 aa, chain + ## HITS:1 COG:FN1355 KEGG:ns NR:ns ## COG: FN1355 COG4393 # Protein_GI_number: 19704690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 135 422 5 294 298 159 33.0 7e-39 MLTQYVTVLQGTLAPALLIMALNVMLTVGEGRDKPLSAYWRLAGFIIGFAGAIVFAALRA TAVINQRTFVNYPTLWCCVIFDVAVFVVVLFARRITTNWHDHRALLDIANAIGAFAIAAT TFRALPDVVLRLTIFVEPGDPIFTSDMLLRALGFVLGAVTAIVAALIFRTMRSTAIRWSF TTAVLLLIALLFVSHFTDLAQILQSKRIVHFPTEAFLALVWCINHQRHMVIAMVLVFIIP VAASIVMGFKIKPEGANEAIVRSHIAFRRRAKAAGAWSLVAMIGITFALTYGVAQTKRVI TLSPPEDYSLSDGVATIKFSQINDGHLHRFQYKAKDGTVMRFIIIKKNGGAYGVGLDACD NCGDAGYYEKDGKIICKKCDVAINLATIGFKGGCNPVPFDYQVESGKIVIQTSTLDALST HFQ >gi|222441569|gb|ABXX02000004.1| GENE 129 162762 - 164126 1476 454 aa, chain + ## HITS:1 COG:FN1354 KEGG:ns NR:ns ## COG: FN1354 COG0577 # Protein_GI_number: 19704689 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 454 2 428 428 340 42.0 4e-93 MFFLRMIFRSFSRQFKRRLLIAVTVCLSATVSVAMLGVVFDVGDKLNAELSTYGSNIIVQ PKADAVVNDLYNTGGDADSSASGTSESDPTTFLKESDVPKIKTIFWAFNITNFAPELNIH ADVNCASESAASADSSSCKASGVPIVGTWFAKTLHMDSGESTVAGMNGMRSWWKLDGSWP KDDSAQGLIGTTLASKLGVAKGDTVTLYKTTADGSRNKQQITITGIYDSGDSDNNAMYIP SFTAQVLANLPDSIDEIEVKALTTPDNDLARKASKNPNALTQDEWETWYCTAYPSSIAYQ IEEVISGSVAKQVRQVAALQGDVLQKTQAVMVLMTVLSLVAAAIAVANLMAASIGERGSE LALLKAIGATDGAVSRLMLAETAVISLVGAIVGALLGSCVAQIVGHVVFGSGITMRPMVF VLVFVLLTLTVLIASFSSIRSILGLKPAEVLHGR >gi|222441569|gb|ABXX02000004.1| GENE 130 164252 - 165472 181 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 284 406 292 413 413 74 29 3e-12 MTNRKMFFTMLWGAVFRRRSRAVMAVIASMVGAATLFCLAATCIAVPQQMNEEMRAYGAN LIVTPSESTEKSNGIDTDTTKALNQMVKGSYSARSAAYRYESVRINSAPYTLAGITTKDV KALNHHWNVTGDWPSEGNVMLGRDVADALGVSIGSTVTIGYRASDDAQDSGAPGQTEAQA MENGRVSSDIMENTGTEFRVGGIVDTGGSEDGIVYAVNADVAKLAGSKRGADVIEYSVNA VGSELNDVVKSINANPSTGVKAQTVTKITSSDTRIIAMLQTLFWIVSLVVLVLTLVGVGT TISSIVSQRRNEIGLRKALGASSQAIGIEFYVESAIYGLIGGLVGTIIGYLLARVLCVSV FERAIGFNWLLGVASLLLSVLIAVIASIPPVRRATRIDPAIVLREE >gi|222441569|gb|ABXX02000004.1| GENE 131 165475 - 166296 274 273 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 221 1 218 245 110 31 6e-23 MSSENTLNMLLELDHISKIYGDLRAVDDLTLTVPQGEWLAIVGSSGSGKTTLMNMIGCMD TPSKGSVMLEGRKLEDLNAKQLADVRKNMIGLVFQKFYLVPHLTAVENVMVAQYYHSVVN EQQALEALERVGLKERAHHLPGQLSGGEQQRVCIARALINCPKLILADEPTGNLDEKNEK IVLDLFRQLHEQGTTIIVVTHDALVASCAQREIMLNHGVLVGEKWNDEAARKAYEQAGGK PAYTGSTTEGAQNGETAISFADPTKVAKTGGEE >gi|222441569|gb|ABXX02000004.1| GENE 132 166353 - 166910 551 185 aa, chain + ## HITS:1 COG:no KEGG:BAD_0103 NR:ns ## KEGG: BAD_0103 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 185 1 185 185 222 78.0 6e-57 MSNESSNAIKVIALSAASLALLSACGEPTATPMDDEYAGNSGESVQSQEENSKNSGSATD SGDSADTDVKNHADDPNSTTSDKQDTGNYADGTYSINGQYGPVSEDTIDVHVTVKDQTVT NVEVIGHPFTSISKKHQNAFAEAINGVVDGKPLKDLKVDKVAGASWTSEAFNKALDVARQ EASIQ >gi|222441569|gb|ABXX02000004.1| GENE 133 167048 - 167701 571 217 aa, chain - ## HITS:1 COG:no KEGG:BDP_0176 NR:ns ## KEGG: BDP_0176 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.dentium # Pathway: not_defined # 1 213 1 213 217 268 66.0 1e-70 MITGVHEAVSEAVSDVVSDAVSDVHEAVRKAQSRREQLREQTDHKIMKATLAIVISDGVG AVTIEEVARRSGVAKTTIYRRYKNADDLLHRVQLEVAGLPDFSDVELSKNGLLTMLQRIQ GCFFDSDFGLKAVGVVLSSDNTSLNAIANQVLVPAEKRFSEFVERGMKAGVFRNGLNPQF LFSTILGSMLACKALHGDASIPWPENMAAVLWPVMAV >gi|222441569|gb|ABXX02000004.1| GENE 134 167698 - 169890 2477 730 aa, chain - ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 687 1 670 709 254 28.0 3e-67 MKNIWKLFVGDVRRLTSNIVSIIIVTGLVVIPGLFSWFNISASWNPFANTGNLKFAVAND DEGYKSDLIPVKISIGDQVVNTLRANDQMDWTFTTKKEAIDGTKSGKYYAAVVIPKDFST RMMTFFTADGDHATLTYYNNEKKNALAPKITGQGADTVAAQINEMFSETLTSTALSITSQ LADELDKPESQATLTNFSNNMGNFANTLTDTSSALTTFSSLTLSAQNLLDSSNSLLSNVS DSAKNAGNELKQSKNSINDLTGAVKTSTNALSTALNSSANSFGAVSTDIDSVFNNAGTQA GNTATALRNQAANVTKQAQSYQNIYDALDELSNNNLMPEVAKIAIDHLKTNVGATITQLN DLANSLNTSADNIDTKVSDTTADRERVNQLAQQAKASIDGIKTDFDSQLKPQLNDISDSI SNTVTALSSTAADLKGALGDLNSTTKSADKQLTNIRTVLDSTAESLTKAGTALSSFNGTL SDALNSGNMDTVKEVLGNNTDSLAAALAAPVQVKRTAVFPVKNFGSQLAPFYTILPLFVG SLLMAVTLKPGVSRKNREGLDNPKPHQLFLGHYGVFGVIALLQSTFSLGGNLLFLHVQAV HPWLFMLAGWTSSLVFSFFTYTMVASFGNIGKAIGVLVLVAQISGSNGAYPLAVLPKIIS DISPFLPATHSIVALRAAIAGIYNNDYWHALGSLLLFLIPLLLIGLVLRIPLVKFNKWYV AKVESTKVIS >gi|222441569|gb|ABXX02000004.1| GENE 135 169887 - 172634 3182 915 aa, chain - ## HITS:1 COG:MTH1858 KEGG:ns NR:ns ## COG: MTH1858 COG1511 # Protein_GI_number: 15679846 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanothermobacter thermautotrophicus # 1 716 1 630 631 241 23.0 6e-63 MRNVLQILRRDLKRLVTVPAAWVIMIGIIIIPPLYAWFNIYGFWNPYGNTQGIKVAVANV DKGTDNALLGKMNLGDQIEDTLKDNDQLGWEFMGKAEAMEAIQSGDCYAAIIIPSNFSED LANVVTDSKNRPTLEYYVNEKSSPISPKITDQGATTVDRTVNNTFVSTVSEVLTKAVNSA NGTINGKTNSFVNETTAELDKTQKNVNLIRSTIEDLDAQLANVPQQTQSARQAMNDVQLA AASAGKGLANTATAIGTTQNGLNTFTSNANTALENGSGLISQATSDTTTSINKVTTAVSS ASGAAQQAVSSMQSVTDRNAQLIEKLKNVSDNTQYQDIIKKLEDTNNTAAGTLNDLKTLS ENTQSTSDSVSKLATDFNTSTQNSLKSMGDARNTLNSGALPQLNSGLSSLAMTAGTLSGT VTSQNTIVTQTSAVLDQLDQVTNDTRTTLQNTDKQLEHVENKLITVSTDLKALGSVDMLK NLTGGSSLDTEKIASFMQSPTVIDTKNVYPINSYGSGMAPLMTNLALWVGAFAFVVIFKV EVDDEGLEGLDLTASEKYFARYMLLGIMGAAQGTITTIGDLLLGVQTVNAPLFVLTGAIT SLVYLSITFALSTTFMHIGKGLCVALVIVQIPGASGLYPIEMMPKFFRMVYPFVPFSYSI DAFRETIAGFYDGHWLKSIGTLLLFAVAAFFIGLAIRPLLVNLNRLFARQIKESDMIIGE EVQLPERGYNVSQAIQVLADKGGYREAIEERASRFAELYPKLKRGALIAGFIVPVILVLI FSFTNGEKSVVLATWIIWVLLIIGFLMVIEYMRFSLQRQVELGSLSDEAIREQLVERQAA RLRRKKRAQQNRRDKLMRKARRRKHETKQAIANVAGTNQADADGVATLVQAMNAAGNTGT ASNANPNGNSERSNA >gi|222441569|gb|ABXX02000004.1| GENE 136 172817 - 173026 80 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTAQLAFCACASRVCCLRSCDYEMARDLCRQQSQVVLVAHKQSSRVAHCDWVLVALYKEG RIVWAEPKK >gi|222441569|gb|ABXX02000004.1| GENE 137 173005 - 174276 1489 423 aa, chain + ## HITS:1 COG:L191765 KEGG:ns NR:ns ## COG: L191765 COG4905 # Protein_GI_number: 15673533 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 216 341 3 125 235 68 30.0 3e-11 MGRTEEVSAAIADETEITAIEEAGIIAQSKSAEADDNPADRRLPLIARIYGIVMLVEGVV TLPIIVISCLYAVQAALSGRLAFGALNLTTILSVIHAAVLLVSTACLAIFGMLLILNKRR HIAQWTYLMIPLTLAEGLLSLSLQGLGVNLISPVVQLLVLVALHITADPSLREERRLQFA LRRLDARSEYETAVSKGMAGRDLTGKGYISLDFFNLFWLFVVGCVFGLVVETLYHYVLFG EWQDRAGFLWGPFSPIYGFGAVILTVLLNHLWRSNWMLIFCASAVIGGAFEYFTSWFMEV AFGIRAWDYTGKWLSIDGRTSGKYMFFWGILGLVWVKLILPHLLAMIQRIPWKIRYTLTA VCFALIFVDGVMTLMALDAWYSRMAGIAQNSPVSQFFATYFDDDFMANRFQTMTLDPSTA GRM >gi|222441569|gb|ABXX02000004.1| GENE 138 174295 - 174531 390 78 aa, chain - ## HITS:1 COG:Cgl2480 KEGG:ns NR:ns ## COG: Cgl2480 COG0695 # Protein_GI_number: 19553730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Corynebacterium glutamicum # 1 77 1 77 77 70 40.0 6e-13 MTVTVFTNPSNPQCEATEQELAKLGVRYDTVDLTKNPSTFEQIKNAGFKQIPVVISPNSS WSGHRPDLIRQLAQSFAA >gi|222441569|gb|ABXX02000004.1| GENE 139 175065 - 175217 115 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKSGGFPSEIGKPWKSNGFQGRGWLVAGKGSASECGSVFEGSSALVNCV >gi|222441569|gb|ABXX02000004.1| GENE 140 175443 - 176633 2179 396 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352511|ref|ZP_03743534.1| ## NR: gi|225352511|ref|ZP_03743534.1| hypothetical protein BIFPSEUDO_04133 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04133 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 396 10 405 405 692 99.0 0 MVSFYAGTDKLIQTVGYYAKDHVKFSTYAAGIQAPAVEGKIFTGWGFASNDGDVPVDPDM VVTGNWAVYAMYKDAPTEDDTTQNVVSFYAGTDKLIQTVGYYAKDHVKFSTYAAGIQAPA VEGKIFTGWGFASNDGDVPVDPDMVVTGNWAVYAMYKDAPTEDDTTQNVVSFYAGTDKLI QTVGYYAKDHVKFSTYAAGIQAPAVEGKIFTGWGFASNDGDVPVDPDMVVTGNWAVYAMY KDAPTEDDTTQNVVSFYAGTDKLIQTVGYYAKDKVKFSQYALGIQAPAVEGKIFTGWGFA SNDGDVPVDPDMVVTGNWAVYAMYKDAPTDDSKKDDSKPADTTKKNDTKSNTKKTVAQKI KKAVLGNTGATVGGVAVFAVLALLGFAGITVLRKRA Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:34:34 2011 Seq name: gi|222441568|gb|ABXX02000005.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont4.1, whole genome shotgun sequence Length of sequence - 144295 bp Number of predicted genes - 111, with homology - 107 Number of transcription units - 68, operones - 21 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 1 - 67 94.0 # AF142677 [R:48033..48709] # 5S ribosomal RNA # Bacillus megaterium # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. 1 1 Tu 1 . - CDS 1 - 204 188 ## PROTEIN SUPPORTED gi|121587643|ref|ZP_01677406.1| cell wall-associated hydrolase + 5S_RRNA 575 - 686 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 726 - 785 2.4 2 2 Op 1 . + CDS 851 - 1069 142 ## BL0037 efflux-type transporter 3 2 Op 2 . + CDS 1039 - 1965 967 ## COG0477 Permeases of the major facilitator superfamily + Term 2163 - 2191 -0.1 + TRNA 2387 - 2474 67.0 # Ser GGA 0 0 4 3 Tu 1 . + CDS 2714 - 3079 350 ## gi|225352514|ref|ZP_03743537.1| hypothetical protein BIFPSEUDO_04137 5 4 Tu 1 . - CDS 3211 - 4911 1222 ## BAD_1513 putative sialic acid-specific acetylesterase - Prom 4967 - 5026 1.7 6 5 Tu 1 . - CDS 5051 - 5224 100 ## gi|225352516|ref|ZP_03743539.1| hypothetical protein BIFPSEUDO_04139 - Prom 5371 - 5430 4.0 7 6 Tu 1 . - CDS 5567 - 6562 667 ## BAD_1512 putative cell wall-anchored protein - Prom 6765 - 6824 2.0 + Prom 6752 - 6811 4.1 8 7 Op 1 . + CDS 6868 - 8253 941 ## COG1373 Predicted ATPase (AAA+ superfamily) 9 7 Op 2 . + CDS 8484 - 10196 2045 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) + Term 10223 - 10289 18.3 - Term 10218 - 10266 11.1 10 8 Op 1 13/0.000 - CDS 10279 - 11187 197 ## COG1209 dTDP-glucose pyrophosphorylase 11 8 Op 2 11/0.000 - CDS 11184 - 12605 993 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 12 8 Op 3 . - CDS 12687 - 13709 1098 ## COG1088 dTDP-D-glucose 4,6-dehydratase 13 9 Op 1 . + CDS 13821 - 14657 330 ## COG0451 Nucleoside-diphosphate-sugar epimerases 14 9 Op 2 . + CDS 14673 - 16313 585 ## BBPR_0060 hypothetical protein + Term 16325 - 16362 0.1 15 10 Tu 1 . - CDS 16303 - 16401 71 ## - Prom 16481 - 16540 3.3 + Prom 16322 - 16381 3.3 16 11 Tu 1 . + CDS 16403 - 17356 311 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 17371 - 17403 -0.2 - Term 17355 - 17394 4.1 17 12 Op 1 . - CDS 17419 - 18489 198 ## BAD_1503 hypothetical protein 18 12 Op 2 1/0.000 - CDS 18486 - 20432 1033 ## COG3754 Lipopolysaccharide biosynthesis protein - Prom 20499 - 20558 1.9 19 12 Op 3 26/0.000 - CDS 20591 - 21865 393 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 20 12 Op 4 3/0.000 - CDS 21865 - 22692 269 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component - Prom 22719 - 22778 2.1 21 12 Op 5 1/0.000 - CDS 22797 - 23822 543 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 22 12 Op 6 . - CDS 23873 - 26470 908 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 26490 - 26549 3.9 + Prom 26452 - 26511 6.0 23 13 Tu 1 . + CDS 26637 - 27686 919 ## COG1088 dTDP-D-glucose 4,6-dehydratase 24 14 Tu 1 . - CDS 28102 - 28575 718 ## BDP_2028 hypothetical protein - Prom 28618 - 28677 3.2 + Prom 28632 - 28691 3.5 25 15 Tu 1 . + CDS 28779 - 29837 1082 ## COG1609 Transcriptional regulators + Prom 29948 - 30007 2.9 26 16 Op 1 2/0.000 + CDS 30108 - 31064 1267 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 27 16 Op 2 4/0.000 + CDS 31130 - 32581 2244 ## COG0477 Permeases of the major facilitator superfamily 28 16 Op 3 . + CDS 32702 - 33679 1191 ## COG0524 Sugar kinases, ribokinase family + Term 33738 - 33787 20.0 29 17 Tu 1 . - CDS 33856 - 34869 1392 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 35034 - 35093 2.9 + Prom 34965 - 35024 3.8 30 18 Op 1 24/0.000 + CDS 35131 - 35421 482 ## PROTEIN SUPPORTED gi|119026501|ref|YP_910346.1| 30S ribosomal protein S6 31 18 Op 2 21/0.000 + CDS 35478 - 36137 757 ## COG0629 Single-stranded DNA-binding protein 32 18 Op 3 27/0.000 + CDS 36198 - 36446 403 ## PROTEIN SUPPORTED gi|23335650|ref|ZP_00120884.1| COG0238: Ribosomal protein S18 33 18 Op 4 . + CDS 36466 - 36912 651 ## PROTEIN SUPPORTED gi|119026498|ref|YP_910343.1| 50S ribosomal protein L9 - Term 36987 - 37035 13.6 34 19 Tu 1 . - CDS 37050 - 39326 1932 ## BBPR_0266 hypothetical protein + Prom 39540 - 39599 1.6 35 20 Tu 1 . + CDS 39822 - 40502 474 ## BBPR_0270 hypothetical protein + Term 40599 - 40644 0.0 + TRNA 40766 - 40839 86.5 # Lys CTT 0 0 - Term 40835 - 40870 5.1 36 21 Tu 1 . - CDS 40898 - 41038 85 ## gi|225352546|ref|ZP_03743569.1| hypothetical protein BIFPSEUDO_04170 + Prom 41619 - 41678 2.4 37 22 Tu 1 . + CDS 41835 - 42119 440 ## gi|225352547|ref|ZP_03743570.1| hypothetical protein BIFPSEUDO_04171 + Prom 42125 - 42184 1.9 38 23 Tu 1 . + CDS 42325 - 43053 972 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 43069 - 43115 -0.7 + Prom 43099 - 43158 2.9 39 24 Tu 1 . + CDS 43261 - 43554 148 ## gi|225352549|ref|ZP_03743572.1| hypothetical protein BIFPSEUDO_04173 - Term 44209 - 44240 -0.3 40 25 Tu 1 . - CDS 44249 - 45382 1050 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 45495 - 45554 2.7 + Prom 45615 - 45674 1.7 41 26 Tu 1 . + CDS 45704 - 45997 209 ## BDP_2004 hypothetical protein + Term 46007 - 46062 13.0 + Prom 46006 - 46065 5.9 42 27 Tu 1 . + CDS 46232 - 47056 905 ## COG0325 Predicted enzyme with a TIM-barrel fold + Term 47071 - 47113 7.0 + Prom 47094 - 47153 5.1 43 28 Tu 1 . + CDS 47186 - 48007 1026 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Term 48035 - 48092 11.3 + Prom 48096 - 48155 2.2 44 29 Tu 1 . + CDS 48242 - 50944 1727 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 50945 - 50995 -0.3 45 30 Tu 1 . - CDS 51098 - 51982 618 ## COG2217 Cation transport ATPase + Prom 51962 - 52021 2.0 46 31 Tu 1 . + CDS 52155 - 53489 1513 ## COG1322 Uncharacterized protein conserved in bacteria + Term 53559 - 53605 1.0 47 32 Op 1 . + CDS 53936 - 56896 3077 ## COG5492 Bacterial surface proteins containing Ig-like domains + Prom 56983 - 57042 1.8 48 32 Op 2 . + CDS 57077 - 63169 5213 ## BBMN68_1446 protein + Term 63273 - 63323 15.0 + Prom 63235 - 63294 1.8 49 33 Tu 1 . + CDS 63422 - 64084 868 ## BAD_1461 hypothetical protein + Term 64098 - 64124 -0.6 50 34 Tu 1 . - CDS 64154 - 64375 99 ## gi|225352564|ref|ZP_03743587.1| hypothetical protein BIFPSEUDO_04188 + Prom 64114 - 64173 2.6 51 35 Tu 1 . + CDS 64370 - 65320 634 ## COG0566 rRNA methylases + Term 65481 - 65553 10.0 52 36 Op 1 31/0.000 + CDS 65739 - 66035 511 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 53 36 Op 2 21/0.000 + CDS 66037 - 67566 487 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 54 36 Op 3 . + CDS 67592 - 69088 2179 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 69135 - 69185 16.1 + Prom 69289 - 69348 3.8 55 37 Op 1 . + CDS 69399 - 70502 1304 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 56 37 Op 2 . + CDS 70502 - 70813 512 ## HMPREF0424_0108 hypothetical protein + Term 70816 - 70863 3.5 + Prom 70982 - 71041 6.2 57 38 Tu 1 . + CDS 71073 - 72662 2162 ## COG1232 Protoporphyrinogen oxidase + Term 72703 - 72764 20.3 + Prom 72789 - 72848 2.0 58 39 Tu 1 . + CDS 72962 - 75112 2650 ## COG1158 Transcription termination factor + Term 75148 - 75187 4.1 + Prom 75365 - 75424 2.6 59 40 Op 1 . + CDS 75580 - 76056 541 ## COG1522 Transcriptional regulators 60 40 Op 2 . + CDS 76081 - 76494 475 ## COG1605 Chorismate mutase + Prom 76496 - 76555 2.5 61 41 Tu 1 . + CDS 76662 - 78722 1681 ## BAD_1451 hypothetical protein + Term 78751 - 78802 7.2 - Term 78739 - 78790 8.0 62 42 Tu 1 . - CDS 78895 - 81681 3995 ## COG0525 Valyl-tRNA synthetase - Term 81741 - 81786 2.4 63 43 Op 1 . - CDS 81810 - 83372 1713 ## COG0747 ABC-type dipeptide transport system, periplasmic component 64 43 Op 2 . - CDS 83415 - 84080 628 ## COG0177 Predicted EndoIII-related endonuclease 65 44 Tu 1 . - CDS 84217 - 84978 881 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 85053 - 85112 3.6 + Prom 84964 - 85023 3.9 66 45 Tu 1 . + CDS 85153 - 85911 942 ## BDP_1972 hypothetical protein + Term 85984 - 86041 5.2 - Term 85982 - 86019 5.5 67 46 Tu 1 . - CDS 86067 - 86633 646 ## COG1971 Predicted membrane protein - Prom 86786 - 86845 1.7 + Prom 86575 - 86634 3.0 68 47 Tu 1 . + CDS 86827 - 87072 109 ## - Term 86993 - 87041 8.1 69 48 Tu 1 . - CDS 87086 - 87580 773 ## COG0221 Inorganic pyrophosphatase - Term 87610 - 87662 4.8 70 49 Tu 1 . - CDS 87725 - 90013 2968 ## COG0366 Glycosidases - Prom 90217 - 90276 3.3 + Prom 90063 - 90122 1.9 71 50 Tu 1 . + CDS 90282 - 91217 679 ## BDP_1967 hypothetical protein + Term 91233 - 91263 -0.5 + Prom 91311 - 91370 2.7 72 51 Op 1 3/0.000 + CDS 91469 - 93244 1911 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Term 93268 - 93313 5.1 73 51 Op 2 . + CDS 93408 - 94502 1265 ## COG0679 Predicted permeases + Term 94532 - 94591 17.1 - Term 94656 - 94703 13.4 74 52 Tu 1 . - CDS 94728 - 96134 1840 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - TRNA 96427 - 96500 75.1 # Met CAT 0 0 + Prom 96486 - 96545 2.2 75 53 Tu 1 . + CDS 96692 - 97726 1094 ## COG1897 Homoserine trans-succinylase + Term 97760 - 97796 0.3 + Prom 98116 - 98175 2.5 76 54 Op 1 40/0.000 + CDS 98198 - 99007 945 ## COG0356 F0F1-type ATP synthase, subunit a 77 54 Op 2 37/0.000 + CDS 99064 - 99291 451 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 78 54 Op 3 38/0.000 + CDS 99348 - 99869 793 ## COG0711 F0F1-type ATP synthase, subunit b 79 54 Op 4 41/0.000 + CDS 99899 - 100726 956 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 80 54 Op 5 42/0.000 + CDS 100798 - 102426 2323 ## COG0056 F0F1-type ATP synthase, alpha subunit 81 54 Op 6 42/0.000 + CDS 102430 - 103350 1070 ## COG0224 F0F1-type ATP synthase, gamma subunit 82 54 Op 7 . + CDS 103359 - 104840 1977 ## COG0055 F0F1-type ATP synthase, beta subunit 83 54 Op 8 . + CDS 104840 - 105118 241 ## BDP_1952 ATP synthase subunit epsilon (EC:3.6.3.14) + Term 105143 - 105216 24.0 + Prom 105188 - 105247 4.2 84 55 Tu 1 . + CDS 105299 - 106003 810 ## COG1637 Predicted nuclease of the RecB family + Term 106015 - 106048 2.1 - Term 106003 - 106036 1.3 85 56 Tu 1 . - CDS 106063 - 107043 941 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Prom 107016 - 107075 3.0 86 57 Op 1 . + CDS 107101 - 108327 1104 ## BAD_1423 hypothetical protein 87 57 Op 2 . + CDS 108327 - 109325 1105 ## BAD_1422 hypothetical protein 88 58 Tu 1 . + CDS 109429 - 110397 1336 ## COG3118 Thioredoxin domain-containing protein + Term 110552 - 110584 -1.0 89 59 Tu 1 . - CDS 110499 - 111137 632 ## BDP_1935 adenylate cyclase + TRNA 111380 - 111455 83.0 # Arg CCG 0 0 + Prom 111380 - 111439 78.7 90 60 Op 1 . + CDS 111617 - 112006 640 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 112047 - 112097 13.3 + Prom 112020 - 112079 2.9 91 60 Op 2 . + CDS 112244 - 113713 1269 ## COG0833 Amino acid transporters 92 60 Op 3 4/0.000 + CDS 113745 - 115535 2215 ## COG0018 Arginyl-tRNA synthetase 93 60 Op 4 3/0.000 + CDS 115541 - 117121 1833 ## COG0019 Diaminopimelate decarboxylase + Term 117201 - 117248 11.5 + Prom 117230 - 117289 1.7 94 60 Op 5 13/0.000 + CDS 117325 - 118641 1788 ## COG0460 Homoserine dehydrogenase + Term 118649 - 118702 17.0 + Prom 118745 - 118804 3.5 95 61 Op 1 . + CDS 118839 - 119843 1347 ## COG0083 Homoserine kinase 96 61 Op 2 . + CDS 119840 - 121312 1276 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 97 61 Op 3 . + CDS 121389 - 122507 822 ## COG1609 Transcriptional regulators + Prom 122634 - 122693 6.7 98 62 Op 1 3/0.000 + CDS 122765 - 124402 2268 ## COG1070 Sugar (pentulose and hexulose) kinases 99 62 Op 2 5/0.000 + CDS 124446 - 125138 656 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Prom 125199 - 125258 4.5 100 62 Op 3 . + CDS 125283 - 126800 2083 ## COG2160 L-arabinose isomerase + Term 126922 - 126957 2.6 - Term 127035 - 127101 23.2 101 63 Tu 1 . - CDS 127115 - 128938 2031 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 129097 - 129156 2.0 + Prom 129425 - 129484 2.7 102 64 Tu 1 . + CDS 129609 - 133706 2937 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components + Term 133747 - 133782 -0.7 + Prom 133957 - 134016 6.0 103 65 Op 1 16/0.000 + CDS 134070 - 134945 1272 ## COG0214 Pyridoxine biosynthesis enzyme + Term 134972 - 135031 15.8 104 65 Op 2 . + CDS 135059 - 135802 846 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis + Term 135852 - 135889 8.2 105 66 Op 1 35/0.000 + CDS 136305 - 137666 2139 ## COG1653 ABC-type sugar transport system, periplasmic component + Prom 137779 - 137838 4.9 106 66 Op 2 38/0.000 + CDS 137951 - 138952 1042 ## COG1175 ABC-type sugar transport systems, permease components 107 66 Op 3 . + CDS 139147 - 139959 966 ## COG0395 ABC-type sugar transport system, permease component + Term 140060 - 140112 14.9 + Prom 140229 - 140288 3.0 108 67 Tu 1 . + CDS 140359 - 140481 135 ## + Term 140505 - 140557 14.3 - Term 140493 - 140545 10.1 109 68 Op 1 2/0.000 - CDS 140627 - 142396 1391 ## COG0492 Thioredoxin reductase 110 68 Op 2 . - CDS 142500 - 143063 666 ## COG0450 Peroxiredoxin 111 68 Op 3 . - CDS 143173 - 143757 -306 ## - Prom 143935 - 143994 80.3 - 5S_RRNA 143311 - 143422 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 143757 - 144295 97.0 # CP001213 [D:902284..905348] # 23S ribosomal RNA # Bifidobacterium animalis subsp. lactis AD011 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Predicted protein(s) >gi|222441568|gb|ABXX02000005.1| GENE 1 1 - 204 188 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|121587643|ref|ZP_01677406.1| cell wall-associated hydrolase [Vibrio cholerae 2740-80] # 1 68 1 68 144 77 61 4e-13 MLSAVIPPERSQPAMPLARQPAYQRSVHPGPLVLWAGLLRIPTSAEDRDQTVSRRSEPSS RAALIGEQ >gi|222441568|gb|ABXX02000005.1| GENE 2 851 - 1069 142 72 aa, chain + ## HITS:1 COG:no KEGG:BL0037 NR:ns ## KEGG: BL0037 # Name: not_defined # Def: efflux-type transporter # Organism: B.longum # Pathway: not_defined # 15 65 7 57 485 67 64.0 2e-10 MSQSIARNNNTATQDDENISINLILAILSTGIMAFIGILTETLTNVLFPGLMAEFHVDTS TVQWLRPAICLR >gi|222441568|gb|ABXX02000005.1| GENE 3 1039 - 1965 967 308 aa, chain + ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 4 295 53 327 454 153 34.0 5e-37 MAETGYLLTVALVTPLSSYFKRKLKLRTIFLTAIVLCITGCLMAACTLNFPMLMTARILQ GAGTGIALPLMFNIILEQSPKSKIGMLMGVGGMVVAVAPALGPTVGGLVGTFMPWCWIFV ILLPFLFVSLVCGLKTIHQVTPTEEAYINPLHVLCLAVGFVCFVFALDRGGSAVTAVSNG DTSATTQCVIAVVLLLIAMAALLVFAWVSHRAFSLVRLTVLRSVKFRWHLLAYVLLQFVT IGYGYMIPNASQLGFGASVLAAGVVLLPGALLGAASAPVSGSLLDKFGPVRPMFTAMLAN LRAFASKR >gi|222441568|gb|ABXX02000005.1| GENE 4 2714 - 3079 350 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352514|ref|ZP_03743537.1| ## NR: gi|225352514|ref|ZP_03743537.1| hypothetical protein BIFPSEUDO_04137 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04137 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 121 69 189 189 214 100.0 2e-54 MAEFDDELDMQRELDTRDSLASMAHYHVSSPGAVTTQVLPPSFIPTATGRIRPVTGTIPA IQSDAQEKQAQIGRSVRSIRSLAAGSLRKSQDFDADGSTDGNGNSGSITPRIASSAPHYV D >gi|222441568|gb|ABXX02000005.1| GENE 5 3211 - 4911 1222 566 aa, chain - ## HITS:1 COG:no KEGG:BAD_1513 NR:ns ## KEGG: BAD_1513 # Name: not_defined # Def: putative sialic acid-specific acetylesterase # Organism: B.adolescentis # Pathway: not_defined # 1 566 1 551 551 677 62.0 0 MKKKRLARVIIAAVVTAAILVAIIVGCGPKWGDGSANVNGSNSNSSNSASDNVSSNDNAA QSNNNYATRITVKLPSYYLENMVFQRGKTLVVKGTATTSQRGKVVDPTQLITTISQGKKS ASAQAKISKNGDFTCTLPKQKASLKPYSLTILYNETTLLTLKNVYVGDVFIAAGQSNMEL NYSQYYEGSGNSYNFGGGLITTDDLPKQLSDNNVHFVASANSSKGTDFPLRDVNEQAGTW LEATADNSQHFSYLAQQFAMQLRAAHPNVPIGIIQTAWGGTPIRRHVQGGDIYANHIAPL EGFHVAGVLWYQGCNDSTNEATALAYESQMTLLINQYREVFDQDDLPFLYVQLARWPGYQ YTQNVRFAQLNTLSNAGLRNASNVAMTVSLDTDKGTSTLIHPLGKDILGARMAAQYLAMS EGKTIPNGPLIAHAKHASDGTIVLSFQNGTATGLQAEKPNYSKTASATVPDYDANPDATP LNGISNVATPTSTPLQGFEIADDSGKWVSATATIKGDQIVLSAADGSSNCNAVTQVRYWW SGNPVISSLLYNDLGLPASPFIAVVE >gi|222441568|gb|ABXX02000005.1| GENE 6 5051 - 5224 100 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352516|ref|ZP_03743539.1| ## NR: gi|225352516|ref|ZP_03743539.1| hypothetical protein BIFPSEUDO_04139 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04139 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 57 1 57 57 99 100.0 6e-20 MSWTSANGREITDEMIDRWRKSYEQGEFPEDERTVGGVIMGRPPLSTDKSPAHGTPS >gi|222441568|gb|ABXX02000005.1| GENE 7 5567 - 6562 667 331 aa, chain - ## HITS:1 COG:no KEGG:BAD_1512 NR:ns ## KEGG: BAD_1512 # Name: not_defined # Def: putative cell wall-anchored protein # Organism: B.adolescentis # Pathway: not_defined # 83 265 29 216 220 126 49.0 1e-27 MARHGKKPSEEGTSPHTPRTLAGSATTNTSADSTDAAASGIAVNSSTVSSAFASDADGNT GNTLVGNASNEVEATEVETNATSTNATGERTISSSNTAEISNRQSHESSESRQPQDLFDA AIAQGISDGDAWTDQRVKHIYRQIIIVVVVVVVVLGAVFGFTGVRASQQMRDLAALNDCK EAVTAMNISYSKAFQLKAKISEAFTSFDGSYDLDKLAELHQTEVTAPKTLSCAADTSATI SKANAAKAEYDKQTKQFKQALQKSDESAATDGGDGTDNSADGTAGDDGTDEATDTEGDAG VAGDAGATDGTVDQSGAADATDATLDDQFLQ >gi|222441568|gb|ABXX02000005.1| GENE 8 6868 - 8253 941 461 aa, chain + ## HITS:1 COG:MA3153 KEGG:ns NR:ns ## COG: MA3153 COG1373 # Protein_GI_number: 20091971 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Methanosarcina acetivorans str.C2A # 39 458 29 433 445 196 33.0 8e-50 MVPDNPCESYAMLVRESMQFDIPTPSRRIEIIRELPQPAVFNAVHIITGIRRCGKTFYLF QKIHDLLQNGVSRNDIFYFNFADDRLQPMQDTVLNDIVTEYWRQYPDSRDHGCYLFLDEV QECANWQGFCQHIAEHEAVTLVITGSSSKLSSEEIATNFRGRSHPHAMAPLSFREFCDFR GIETPTAGSTLADAVFSPREVTRFEAAYNDYLTIGGFPAVQRMVEADRIETLQGYVRDVV ARDVAERLGRENITLATQIALFLLRNTACELSTNGLVETLRAVGWKIYWDKANTLLELFK QAFLAYQLEEYSTMLKPGSTAVPKMYAVDQGMVYAVSRANQQDIGKRLETAIFCELQRRT SGRRTETITSYTMPTSKQEKVDFLIGDALVTEPYGLIQVCANMGNEKTRAREIGSLQAVM QRTNVDSGLILTLNEGETIELPDSTGTIHVLPSWKWSLYEA >gi|222441568|gb|ABXX02000005.1| GENE 9 8484 - 10196 2045 570 aa, chain + ## HITS:1 COG:L154225 KEGG:ns NR:ns ## COG: L154225 COG3757 # Protein_GI_number: 15673122 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Lactococcus lactis # 194 395 62 260 271 64 26.0 6e-10 MVSPHHVVKIATALSAVALTASVAVAPAYALQDIAIEDAVAQSGSVTADNGVVMQSDDQS DDQTGGQQSQDSMPDNPNAKLPDNVSDEISDDATVISEDLAVTPEGEVKNIETGEIVTDP TLVGTKDQQPDPLAKTNGESFIPVSAEDVKNAVADANVQLSKFESNEYGAHWGTYNNTKA FFDYQNNLFVQQAKGVIDVSEWQGDIDWAKAKADGVEGAIIRLGYGEGNNADKKAQRNIS ECKRLGIPFGIYWYSYADTPALAKEEGADVVAKLKQFGVNPSDLAYPVYYDLEKWTWEGH QPPTDPNVYNNIVNNWYSALQSAGYKNLGVYSYTSYLQGPLKHADIYAKTTWVAQYGARM GFDSFPTNSRGWQYTSTGKVDGISGNVDMNAFGNKEYESLINLLWVVRDEDIAVGASVNA PYTDLEYKWQSYNVNTGKWKTIANWNSANWAGWSDDVGTYWLHLEVRDAASKTSVGEKTI AFAYVPGSKRINATYAGWQSKDVLLGVSSDNAQGRYKIKIYDVNKQQWVAGFNGQWAVWE KPSKGIYWTHFELYTSNGKLVETKTYAFGV >gi|222441568|gb|ABXX02000005.1| GENE 10 10279 - 11187 197 302 aa, chain - ## HITS:1 COG:NMB0062 KEGG:ns NR:ns ## COG: NMB0062 COG1209 # Protein_GI_number: 15675999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 282 1 282 288 404 68.0 1e-112 MKGIILAGGSGTRLYPLTTVTSKQLLPVYDKPMIYYPLSVLMMAGIRDILIISTPKDLPN FERLLGDGSQYGVNFSYKVQPSPDGLAQAFIIGEDFIGGEPCALVLGDNIFYGNGLGKTL RRAASVKHGATVFGYYVDDPERYGVVEFDSNHKAISIVEKPEHPASNYAVTGLYFYDARV SEFAKQVKPSPRGELEITDLNKMYLEDNSLNVQTLGRGYAWLDTGTMDSLFEAGEFVRTI QHAQGLPIAVAEEIAFENGWISAEQLMEAAIKYGKSPYGKHLKDVADHKIISRPNDDPQI TE >gi|222441568|gb|ABXX02000005.1| GENE 11 11184 - 12605 993 473 aa, chain - ## HITS:1 COG:Cgl0332_1 KEGG:ns NR:ns ## COG: Cgl0332_1 COG1898 # Protein_GI_number: 19551582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Corynebacterium glutamicum # 1 189 1 182 182 238 61.0 2e-62 MDFEKDLRVEETNIPGLLVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNA KKGVTRGIHAEPWDKYISIATGSVFGAWVDLRPGESFGQVYTTVLDPSKAIYVPRGVGNS FQALEDGTAYTYLVNAHWSLEQKKTYTFVNLADPDLDIQWPIPLDEAERSEADLKHPMLR DAKPMAPKRTMVFGCNGKLGKAIRQYAEDHHLEGFEYHDTDTFDISDAHAFENVDWDLYG TIINAAAFTAVDAAETAEGRKAAWLTNVQGVKNLAKVATDHKITLVHISSDYVFDGELEF HKEDEGFAPLGVYGQTKAAGDALVENVPQHYLLRSSWVIGEGRNFVTRMLGLAQSGEPAE APRDQFGRLTFTFDMANAIFHLLTTHAEYGTYNMTGSGKVASWYDIAKIVYETAEADISA LKANSVEEYVQNTHGALRPRNCSLDLSKLESTGYAPVDWEEALHDYLQKEIAK >gi|222441568|gb|ABXX02000005.1| GENE 12 12687 - 13709 1098 340 aa, chain - ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 9 337 3 340 346 484 70.0 1e-136 MAEETFTPKNIIVTGGCGFIGSNFVHYVVDNHPDVHVTVLDALTYAGNIENIAGLPEDRV EFVHGNICDAELLDRIVPGHDAIVHYAAESHNDNSIADPEPFLKTNVEGTFRLLEAVRRY GIRYHHVSTDEVYGDLALDDPAKFTERTPYHPSSPYSSTKAASDMLVRAWTRTYGIRATI SNCSNNYGPYQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILTKGR IGETYLIGANGEKNNITVLRMILKMMGQPEDAFDWVKDRPGHDRRYAIDSTKLRTELGWT PTHTDFESGLKTTIDWYTDNRQWWEPAKAATEAKYKQQGQ >gi|222441568|gb|ABXX02000005.1| GENE 13 13821 - 14657 330 278 aa, chain + ## HITS:1 COG:BS_ytcB KEGG:ns NR:ns ## COG: BS_ytcB COG0451 # Protein_GI_number: 16080139 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus subtilis # 4 275 2 290 316 66 24.0 6e-11 MAKKILVTGAGGYIGRHVVSALLDAGQDVIASDLRLDGVDERATKVQANIFEPNDDLFEE LGAPDVCLHMAWRDGFKHNSDNHMGDLSNHYRFLKHMLDSGLKQIAVMGTMHEVGYWEGA IDENTPCHPASMYGIAKNALREATLMLAKEYDATAQWIRAYYIVGDDAHGSSIFSKLLQA ANDGKATFPFTTGKNKYDFIDVDELAGQISAVVSQDAVDGVINCCTGEPMTLAERVERYI KENDLNIKLDYGVFPDRPYDSPGVWGDASKIKQILKNQ >gi|222441568|gb|ABXX02000005.1| GENE 14 14673 - 16313 585 546 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0060 NR:ns ## KEGG: BBPR_0060 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 40 546 25 539 539 404 43.0 1e-111 MTCASTTEQTIDSIAKGKRKNSGEKSVDSTTSTFPLERQYTVRGFMRFLRMNPWDMVLST FLLLMGYELKMFGNSYSIDTEAMIQVQSSLYRSWIGLERFGLLLLKKMLGLYWYNNALAS FLTAVCLLVAALLWAYLFSGVTNFIGKYHPVYFVGPFVTSPVLAEMLGFSLMGAEVGIAI GFAAIALMCLMDFVVSKKWWMGFLTVLFATVSFSLYLAMVTVFIAGFAMVFILLFWDNSK FTLARRFVFIGVGAGFFCISYLLYVVANVCALKICHMTTNPYISEQSRWGKDSVHHILQS ISLHAASLYSGKGIYYSKVFTCLLALFIVIILISVFRHKVDVLTLIVSLCLCLSPMMMSI ILGSAPSVRTEMSYPLMFAFAVVFLVMWTSDLFNGKIAVKYVAVVLAFILSWSQALIVNR IFYTEAINHQQDAELAQDIRNRIDELGVTDQSKETLVFLNYHPSACNSDCFTSDQLGLVG RSLFEVTVSPEQGTFVKTNFMNIMGNKFKQASKPQLQSAEKVGAAMPHWPAPGSVAKKGD LIIVNF >gi|222441568|gb|ABXX02000005.1| GENE 15 16303 - 16401 71 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLAKIYSPIIKYYLKRTKQYKYMLQYAKAKN >gi|222441568|gb|ABXX02000005.1| GENE 16 16403 - 17356 311 317 aa, chain + ## HITS:1 COG:L29089 KEGG:ns NR:ns ## COG: L29089 COG0463 # Protein_GI_number: 15672983 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 5 314 4 312 318 345 53.0 7e-95 MTLPVVYFVLPCYNESEGLRHTADVLKKKINQLIACDGISGKSRILFVDDGSKDGTWDLI QQLHYEDEALFGGVKLAHNRGHQSALYAGLMQALRDGCDAAISMDADLQDDVNAVDEMVK KFSQEHCEIVYGVRSSREKDSWFKRNSALMFYRVFEWMGAETVPNHADYRLMSRLALEAL SEYHEVNLFLRGIVPSIGFKTGKVYYVRGVREAGESKYPLKKMIAFALEGITSFSTKPLK FVTGLGVISILIGLIMLAYAIGSVFMNHAVVGWGSMMCSIWLIGGFLMVSMGIVGEYVGK IYLETKHRPRYYIETAF >gi|222441568|gb|ABXX02000005.1| GENE 17 17419 - 18489 198 356 aa, chain - ## HITS:1 COG:no KEGG:BAD_1503 NR:ns ## KEGG: BAD_1503 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 355 1 355 355 552 88.0 1e-155 MTDNSLTAKKAEDVAQQSKKKRPRLFYLDLVRALAAILIIITHFNNPYMLGHPVFIYEPF GIYVGSLGVSLFLIISGAALMYTYGESNKLDCRHFYYKRFIGIYPMFWIAFIIANAYLFL RNGGHVFANASKWTLIFSMLGIDGLMANTSLPTFYTLGEWFLGFILIFYAVFPLLRYGVK EHPIVTGSVAIALYALTLYFHPMPLGLPSDLLLTMRLPELLFGMYFIQYIRKIPTYAAAV ALLFLVVQEIHPLLNGSFAVTIVGICAFAVIVYIAKWLDIQPIRVPVNSVSKYSYPIFLV HHVLISQVFTIVDCTALSHFDGYLLFFVDFMIIMTLSIALYRLEKNTIQYIHSMFQ >gi|222441568|gb|ABXX02000005.1| GENE 18 18486 - 20432 1033 648 aa, chain - ## HITS:1 COG:mlr7559 KEGG:ns NR:ns ## COG: mlr7559 COG3754 # Protein_GI_number: 13476280 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis protein # Organism: Mesorhizobium loti # 9 571 1 559 644 371 38.0 1e-102 MKIQDESSVKRLGIFFFYDAEGVVDDYIPTLLNGFRPYLSEMTIVCNGKLNEAGEKILSS YTNNLIVRPNEGFDVWAYKTAMESYGWEKLVSFDEVVLFNATIMGPVYPFSEMFETMDQR DLDFWGITKFHKVPQDPFGRSPFGYLPEHIQSHFHAYRRSLIESKSFQDYWDNMPPIKSY YDSVGLHESLFTKRFADKGFKWDTYVNTDDLEGFTYGPITFAAKTLVAEKRCPIFKRRSF FHDYMDTMNQSVGNAALDLFEFLRDHTDFDVDLIWQNALRTMNLADLVRNLHLDFVLPSN TIAPIPTNKRIALIMHLYYMDLLDKTLEYAKSMPEGCDFIFTVGSEENATIVRERCKDLP YNVDVRVIQNRGRDVSALLVGAGKDCLQYDYVCFAHDKKVTQLSPYSIGDGFSYKCFENV LGSKALVSNIINHFENDPHAGVLAPAPPNHADYFGNFASLWGPNYEGTKKMLEETLQVKV PLDKSKEPIAPMGTMFWFRPKALQQFFDIDWKYEDFPPEPNKIDGSMLHFVERAYGYVPQ ANGYYTGYIYSDRFARIEITNLSYDIQKLANSAAPYLDATLLGTCTNVPRGFSLRAAILL WFKRMLVKIPFAYHCGAKFMNLYRHIRHPRTYKTRYGNANSHLKKDRT >gi|222441568|gb|ABXX02000005.1| GENE 19 20591 - 21865 393 424 aa, chain - ## HITS:1 COG:L4342 KEGG:ns NR:ns ## COG: L4342 COG1134 # Protein_GI_number: 15672185 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Lactococcus lactis # 18 417 5 385 398 363 51.0 1e-100 MTTVETPIVLSNDEENPLALSVSHVAKSFRLPTEQASGLKQAFLNWTKGIKGYREQQVLR DISFEVRKGDFFGIVGRNGSGKSTLLKIISGIYTPEKGNVVINGTLVPFIELGVGFNPEL TGRENVYLNGALLGFSRDQVDAMYDDIVEFAELGEFMDQKLKNYSSGMQVRLAFSVAIKA RGDILVLDEVLAVGDEAFQKKCDRFFKQVKTDPSKTVILVTHSMDAVKKYCNKAILIKDG EIIASGDPHNVADQYSLENAHELNYYKTKNDSSKELHYPNGLNQRVPVLRITPVSPKIVD GESPFVFDVEYEYAISDRQGYLGLILQDARRGGQIYDVDTQSEYFGLPIEKGHHKVRFSI PMEQFNNGEFRIFATIRSESEESERPDYVAFTNDDFCCYFAVRNDRNSENGILSDRALTF NRID >gi|222441568|gb|ABXX02000005.1| GENE 20 21865 - 22692 269 275 aa, chain - ## HITS:1 COG:L3425 KEGG:ns NR:ns ## COG: L3425 COG1682 # Protein_GI_number: 15672184 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Lactococcus lactis # 13 275 6 269 269 218 47.0 1e-56 MSDLIRRFKAKYRYSIVVFKELVKTDFQLRYQGSFLGVLWSVLKPLMLFAVMYMVFVRFL RFSDGTPTFAISLLCGTCLWSFFSEATTMGMQSIVNRGDLLRKVHFPSYIIVAATTMGSM ISLGINLLVVVIFGFFSHAHYTWYMLLVPLNVLQLYALALAISLLLGTLYVYFRDVSHIW DVVLQAMFYAIPVIYPLSMVSQYFPAVSKIMLLNPIAQTIMDVRHNLLSPEDIPTVWTWV GDPILSLIPYALTALLLWLGVHVFRKNSSKFAEVL >gi|222441568|gb|ABXX02000005.1| GENE 21 22797 - 23822 543 341 aa, chain - ## HITS:1 COG:SP1764 KEGG:ns NR:ns ## COG: SP1764 COG0463 # Protein_GI_number: 15901595 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 7 251 4 233 301 130 32.0 3e-30 MTGIRPLVSIIVPVYNAEKYLPYCIDSILAQSYQTLEIILVDDGATDKSPQICDSYAALD SRVHVIHQENGGIAKAQNAGLDAAHGEYVAFADNDDILDCHNIEFLLHALLSSGSDMSKA RWQQFGISQLDKVKSVAAVGATAPNKVTAFKNPLRSYQTVFCKSLRLIGDILKKNTEARY FNEANWCRLYKRELWDGIRFPEGMYAQDVMVAGKLYSRMHKVVDIDCTLYYWLQSPGSVT HSKRNYSFYQDNLNAGLSNFEHALSQGVLPARSYYTMIGSLNEAASAPDLSSNRSTYERS KNEAQSLIRKLSLSQKTICVILRHMRLVEKAVYDRKIKNMQ >gi|222441568|gb|ABXX02000005.1| GENE 22 23873 - 26470 908 865 aa, chain - ## HITS:1 COG:SPy0793 KEGG:ns NR:ns ## COG: SPy0793 COG1368 # Protein_GI_number: 15674836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 257 856 270 813 824 262 31.0 2e-69 MPIFSPDRHACAPSYVKLTKQPIAGGTYRPLANDEDSNACAPSALSGHHGSKLYTQKSAI HAISDNTSIFIPKVDAPHLPKTTDDKSINEAANNSTHPAPLSAEIQLTQTDEHPLMQAFE VCKQAARTTTNALSTAGHAVVKAAKTTGHAIHIAATAVKTAWHTFTNFKAVQLIIKFFRK AYGPWKKRMRFSYAFYAIVFTLLTSAEVIFLQWGMYSEPTYDKSNEVDQTTKILNSVAGQ VTKFVSQMYLEQKYQFLLSLFTLAVIYLVFIFVTNRFWIATLLFGILFTVYGTANSVKMG LRNESIIPADLSFVTGGDSGKLLSFIPKESQSFVNGAATVLVWFICCCIVFFIIDGRRSF IYCSWKRPFASIKNFTGTLTRIVAAISSIALLCSYSWNLSVPGSWAYSFAGSLGYTPSLF DTKIDAQTNGPVTTFLSLAKTKVIEKPKDYNRDTMTQIAEKYSQQAISINNNRQNDLTDS TVVMILSETFSDPTRIPGISFSTDPIPNIHAIKDTTTSGLMLSSGYGGGTANMEYQALTG LSLSIFDDSLIIPFQQLVPNQKNPYAFNQIWNNRYGADGSDAVHPYYQSMYLRNVDYKKF GFSHLRTLDSTPSIKHKDTIDYSPYVSDEEAYKNIIDLIEKQKHPQFLQLSTMQNHMPYT NWYIDNEFVGADTSTGLSADEYQNLETYTKGLNLTDQATASFLDELNQIDKPITVIFYGD HLPSIYSTADQDTENHVALHETDYFIWSNSASASSGTKLDASNTAFTSPNYFMSLAANHM NAKVSPYLALLTQLLEQIPAASRIATETGGISSGDTTYLDMSGNQISKKSLSKDAKQLLR DYELVQYDMTAGKGYLNNTDFTKVQ >gi|222441568|gb|ABXX02000005.1| GENE 23 26637 - 27686 919 349 aa, chain + ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 18 344 3 338 346 462 64.0 1e-130 MQPCRYPEMVSSEIFKPRNIIVTGGCGFIGANFVRYVAHNHPDVRITVLDKLTYAGNPQN IAGLPQSQVELVQGDICDAALLERIVPGHDAIVHFAAESHNDNSIANPEPFITTNVEGTF HLLEAARKHDVRFHHISTDEVYGDLALDDPCKFTESTPYKPSSPYSASKAASDQLVRAWV RTYGLRATISNCSNNYGPYQHVEKFIPRQITSIMEGVRPKLYGTGENVRDWIHTEDHSSA VWKILTRGRIGETYLIGADGEMSNIAVMRMILRLMGCAEDAFDWVRDRPGHDRRYAIDSS KLRTELGWKPVRTDFEAGLQATIAWYAANRAWWEPAKAATEARYRAQGQ >gi|222441568|gb|ABXX02000005.1| GENE 24 28102 - 28575 718 157 aa, chain - ## HITS:1 COG:no KEGG:BDP_2028 NR:ns ## KEGG: BDP_2028 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 6 157 4 155 155 136 67.0 3e-31 MQPTAQKNNAKQRKTIAIVAVIAVVAIALAAVAIIAVANKREMTQAASDTCTLNAKALAT HQQNFEVAQKEAEDAAKLTVDDVADGTTLETLKDAITLAEAVENAPTCPANGNASDFTKA TDDIRTYADNLRNITNELDAAAKSVIASQELKLESAK >gi|222441568|gb|ABXX02000005.1| GENE 25 28779 - 29837 1082 352 aa, chain + ## HITS:1 COG:PM0547 KEGG:ns NR:ns ## COG: PM0547 COG1609 # Protein_GI_number: 15602412 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 5 316 2 309 334 190 35.0 3e-48 MAYRATLKDVAAAAGVSVTTVSLVLNNRPARVSEEKRKAIADAAKKLNYVPNQSARSLVT KQSQLVALIVPDIENLFFAALAKCVEDECAAQGYSLIVANSDDSRAAEHELLQRLPARGV DGVMLIPARESCVGSAVEQLCEDVALVSCPVVLIDRLTQCGWCDAVGFDNYLGGRLAAQY LLEGGHTRIGIVTGDIAESSAAERRRGFVDAIEQSGKHFDSSLCVEGDYRFDSGYRAANQ IIDGGATAVFCCNDVMALGFRQRMAERGLHVTEDMQVIGYDNILKRFGLGWRMTTVEQSV TDLAAACWGMLRKRIDVAVRAKSGTESGDARPWLSDPQVEVLTPKLVQAACA >gi|222441568|gb|ABXX02000005.1| GENE 26 30108 - 31064 1267 318 aa, chain + ## HITS:1 COG:Cgl1931 KEGG:ns NR:ns ## COG: Cgl1931 COG1957 # Protein_GI_number: 19553181 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 2 316 3 315 316 409 68.0 1e-114 MKKMILDLDTGVDDALAISYALGSPEIELIGITGTYGNVLVEQGVRNALAVTDLLGHPEV KVYQGLPHSSTTDHFEVLPISAFIHGDNGIGDVEIPDSSRSVETESAVDFIIDAVKTYGK DLVYVPTGPMTNIEAALKKAPEIKDEIGQIVLMGGALTVPGNCNACMEANISQDPEAADY LFRSGAPTTMIGLDVTLQTLLTYKETQQWRDLGTKAGKFLADMTDFYIKAYETTSPHLGG CGLHDPLAVGVAVDPTLVTTLDINMKVDVEGPTRGRTIGDETRLNDPAKTMKVAVGVDVP RFLNEFMTRISGLAAKAE >gi|222441568|gb|ABXX02000005.1| GENE 27 31130 - 32581 2244 483 aa, chain + ## HITS:1 COG:SA0132 KEGG:ns NR:ns ## COG: SA0132 COG0477 # Protein_GI_number: 15925841 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Staphylococcus aureus N315 # 29 467 10 444 450 134 26.0 4e-31 MSNNTTAVTGTASADPFDDPVTSNKMAIRALIPLLITFVLGTLCLQGFNLVFQQVGADVG APNQASLITAFPSIVLGIVCFIYGSLGDFVSLRKLVTVGLVTLFVGSIFGFVANYFFAAN LWTVIIARVLQTAGEQVAGSAFLVVATKYLRNDLKVIFFGLFTAAYQLSASIGVFAAGML SSIAWQFLFLIPSVTILFLPILLKTLPSKSGNGQKVDAFGFVIFGFATAFLTLFFSYMAW WMLVVSLLLFVAFAFYINKASNPFITPAFFKNTRWLRAICLILVFYFVNYALSPIFNAIG TNIYGMTTTQVSLHIVWAFVVAAVVGTCSGMIIRKIGIKAGIVTAGTFMFLGWTGAAFCV NSGFVVLTLCACVFYAGCGLMYSPVVSTVLGTIEKDESGRGVGMNDLAMNVSPSIGIAII GSLLGSNALAGGSITGATGTAANYANLLLVAAGTALLGLIVFFVFKKKIYEGNHALETEE SAK >gi|222441568|gb|ABXX02000005.1| GENE 28 32702 - 33679 1191 325 aa, chain + ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 13 323 1 304 308 151 35.0 2e-36 MSATEVLSALDRIHGTVSVIGSMNADYTVTAQRLPGPGETITGGPLQLLPGGKSGNQAAA AARIGATVQMFGAVGSDSNADFLLGALGEAGVNTTHVRRVLGPSGTTVITVDATGENTIV YSPGSNAQVTVDYVESVRDALARSSVLGLCLESPIETVTAAARMCHEAGVKVLLNDSPFT PSLPAELVEASDILLVNEHEMVQLLGIDEPENDDWDGFDWNHALEAMRGFGFEQAIVTLG GDGSVVLDSTSATPIQRIAPVRVNAVDTTGCGDSFMGTVLAGLASGMALSEAAELASYVS AYAATGYGAQASYGNAAQIREAFAK >gi|222441568|gb|ABXX02000005.1| GENE 29 33856 - 34869 1392 337 aa, chain - ## HITS:1 COG:Cgl0918 KEGG:ns NR:ns ## COG: Cgl0918 COG0462 # Protein_GI_number: 19552168 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Corynebacterium glutamicum # 11 325 10 323 325 385 58.0 1e-107 MSAILEGTPDKKLALVTGRAYPEQAHETAKYLGIDVLETTAYDFANGEMYVRYTEPVRGA DAFVMQAHTEPINKWIMEQLIMVDAMKRASARSITVVAPFLGYSRQDKKHQGREPITARL IFDLFRAAGADRIMTVDLHAAQEQGFFDGPVDHLTATPVLLDYVRNNMPLENTTIVSPDA GRIKVSEQWAAKLGNLPLAFIHKTRDTTRPNHAEAHGIIGEVEGHDCVVVDDMIDTAGTI CEAVRTLNNAGAKSVTLVATHGLLSGPAVERLRNCGAKEIVLTDTVPVPEEKRLPNMTVL SVAPLLAAGIRSVFESGSVSTLLNGLPEDMRPRNIYA >gi|222441568|gb|ABXX02000005.1| GENE 30 35131 - 35421 482 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119026501|ref|YP_910346.1| 30S ribosomal protein S6 [Bifidobacterium adolescentis ATCC 15703] # 1 96 1 96 96 190 98 4e-47 MMSAHKYELMFIADPELDERGLKKLTEQYLETVTKEGGAVENIDIWGRRKLAYEIAGKTE GNYVVVNYSAEPATSDELDRLLNLNESVIRTKILRK >gi|222441568|gb|ABXX02000005.1| GENE 31 35478 - 36137 757 219 aa, chain + ## HITS:1 COG:MT0060 KEGG:ns NR:ns ## COG: MT0060 COG0629 # Protein_GI_number: 15839431 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 119 1 119 164 144 61.0 1e-34 MAGETIITVVGNLTADPEIRTVGNGSSVASFTIASTPRTWNRNTGQFEDGQALFMRCSAW RDMAEHCAQSLSKGMRVIAQGRLQQRSYQANDGSQRTVIELQVDEIGPSLRYATAQVTRT SSANGGNFAGNRGGNAFAGGNGGFNNGGFAGNAGGYQGGAGYSGGAGYQGGATAPANAAP AVQPAPASDPWGNSDNSGSSSFGSFGSSEFGGSSDEPEF >gi|222441568|gb|ABXX02000005.1| GENE 32 36198 - 36446 403 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|23335650|ref|ZP_00120884.1| COG0238: Ribosomal protein S18 [Bifidobacterium longum DJO10A] # 1 82 1 82 82 159 97 5e-38 MSRKRPQPPVKPFKKKPNPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVSVQEQR ELAKAIKNAREMALLPYATSGR >gi|222441568|gb|ABXX02000005.1| GENE 33 36466 - 36912 651 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119026498|ref|YP_910343.1| 50S ribosomal protein L9 [Bifidobacterium adolescentis ATCC 15703] # 1 148 1 148 148 255 89 9e-67 MAETKVILTKSVNHLGHPGDVVSVKAGYARNYLIPQGLGFAWSKNAAAQIEAMKRARLAK AVATREEAVAAKELIEGSVVEIAAKVSESGKLFGGISADKIAIALSSKAAVNPKNITVDP IKTTGEFAATVALHPEISASFTVKVVAE >gi|222441568|gb|ABXX02000005.1| GENE 34 37050 - 39326 1932 758 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0266 NR:ns ## KEGG: BBPR_0266 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 8 753 120 879 880 539 42.0 1e-151 MAILQLRGAAFGAYMLARKSALRFKWTGAISSAIVGVLSGLVVVILAAIFPAKIGGSYAY YSASASLSGASFRTFFMAFLLAGLGALAGYALAQFAPDSNNMFSATWRWAHRTRGFVRTL VESAAIYGVLFLALGLVALIVATAASGSALAGILLIPLLLPAVPFVLFSVSSFGGVTASV SGQSSYTLSLFNVASVTQYAWALWICFVLFIIATIYIALRETARNMYDPYYAKWENTWKA PVAVMVFWLVAEFLCTNFLAGYSSNTVSTMVPMWYFIVAGVWAFLVEVIAMTFGPTLVAS TPGLWKILVGGTVQQTPQNVVDYVKACDPHFGQPKAARTAASAQTTQTAQYNAQYNAQYA NPSAPATSPAAQTAPTQAMPAVPMPTTPIPAPAASVPPVPQSTASVPPMPQSPADIPMPA VPQGEGKPLDPKTKKTILIGCIVAGALIVLGIVYGVLNSTVFSAKSMAESYVSAIASGDY DKANDIADPQVGKNQRKLLSNSVAKTDNATISNAHVNGVKSGNGTTTASISYSLNGETVD EELTMRKSGNKFLIFPNWQITTPLIKSINVSVPSSVESLTVNKVAVTAKNAEKTDSGEWQ LRVYPGTYNISVTSTDYIVSETVVFRTNEDSDSPTTLKVTTTSKFKDALSTAVNNALDKC AESTDYAPENCPFGFRVWDEDNYRNFAWSISIYPKIDEVDLDYGAFDTKTGKAKCTYEVK DGDSWDSDDDSTTFNASGSFAIKDGKVTVTLDDGGYSY >gi|222441568|gb|ABXX02000005.1| GENE 35 39822 - 40502 474 226 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0270 NR:ns ## KEGG: BBPR_0270 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 13 225 213 426 427 190 49.0 5e-47 MIATVAFSAHACGDTAWKGEDVTISIKDSSNEVIASAVYDFASDPMQFTSGTATLELAYA IGQYWRASDQIETKSTSMVVQKGATPNGNAVASVGDARGGANIADSDAERYAQLALSWQL SHDRSAVSGLYDIPTTQLFSRKYGMEVDGKTQQYRDIYAQYLTSRASWPKAVLAWAADYS YYTRYGHEADYYVLLSGEEFGSVADARAWCSDNGFGENDCMAVQIN >gi|222441568|gb|ABXX02000005.1| GENE 36 40898 - 41038 85 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352546|ref|ZP_03743569.1| ## NR: gi|225352546|ref|ZP_03743569.1| hypothetical protein BIFPSEUDO_04170 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04170 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 46 7 52 52 86 100.0 7e-16 MLTNGKIPPLTGGIRTLENLADSTDAEYEEDRPEKQFLRKLQWMWE >gi|222441568|gb|ABXX02000005.1| GENE 37 41835 - 42119 440 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352547|ref|ZP_03743570.1| ## NR: gi|225352547|ref|ZP_03743570.1| hypothetical protein BIFPSEUDO_04171 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04171 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 94 49 142 142 154 100.0 2e-36 MVVATLTTPKKAAKGNLIGTWGFSAKAAGLTITEMQMTMQTGGTWTGSMKSAGDDKAEQF GGTWVSQGGSTYHINETQSYNSEFDVTLPSGRQY >gi|222441568|gb|ABXX02000005.1| GENE 38 42325 - 43053 972 242 aa, chain + ## HITS:1 COG:CAC0770 KEGG:ns NR:ns ## COG: CAC0770 COG0580 # Protein_GI_number: 15894057 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Clostridium acetobutylicum # 1 238 1 238 242 258 56.0 5e-69 MEYSTFVKLAAEFFGTAILMIFGNGAVANVELKNTKGHHAGWLNIAMGYGFGVMIPVLMF GAVSGAHINPAMTIAQAVNGLFDWSLVLPYIIAQLLGAAAGQLVVYITYYPHYKDTENAN AILGTFCTTDAHNDRINYFVNEFFGTLVLVFGALCCLSMPWGEADHAAASIVVGFIVWGL VTSMGGPTGPGLNPARDLMPRLLHAILPIPSKGSSRWGEAWIPVVAPILGAIVGAFVFKL FA >gi|222441568|gb|ABXX02000005.1| GENE 39 43261 - 43554 148 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352549|ref|ZP_03743572.1| ## NR: gi|225352549|ref|ZP_03743572.1| hypothetical protein BIFPSEUDO_04173 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04173 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 97 1 97 97 144 100.0 2e-33 MKRIRTILRALDPKAAATMSRRERTEAFRIRRSVVAWILALCVIVSCTSCSVHAVLVNAV LNGHAKTAQIGNSGTHSEKTDQSAKSEKKSQQSEKKT >gi|222441568|gb|ABXX02000005.1| GENE 40 44249 - 45382 1050 377 aa, chain - ## HITS:1 COG:NMB0349 KEGG:ns NR:ns ## COG: NMB0349 COG0008 # Protein_GI_number: 15676264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis MC58 # 2 302 3 238 295 171 37.0 2e-42 MTGRFAPTPSGRMHIGNVYAMLGAWLSARKSGDSIRLRIEDIDEPRVVPGAAETMMRDLE WLGLGWDDEPVFQSSRHALYQEALELLSKLSFDEISDIISTGSNDSKPCSTTAGNEAATS EATPLIYPCFCSRADIRAASAPQEGDRFTVYPGTCRRLIASEPQRAKQRLANNDRHSMRI ATADTTITFHDEVFGTQQYNLAHDIGDIIVRRSDGIYSYQLAVTVDDLDMGITDIVRGRD LLRSNALQIYIRKALINAGFKPSEPTQPFHPADGSNKPDDVTISYAHLPLIDNAAGQRLA KRERSLDLGILTAHGATAQQIIGYCAWLLGLQGDLKHTKPQPMSADEALGVFSWDAVRTN TSDRTLDQGEFNAYFGL >gi|222441568|gb|ABXX02000005.1| GENE 41 45704 - 45997 209 97 aa, chain + ## HITS:1 COG:no KEGG:BDP_2004 NR:ns ## KEGG: BDP_2004 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 93 39 131 135 108 59.0 5e-23 MRRYLDGERPSTIFTSAGLSPAIIGRKRVERNIARWKVDLDIMAAARSNSTTGALSSDTR ERLVTVQLGQIRSLTCQVLALKERVDALERKLDESQG >gi|222441568|gb|ABXX02000005.1| GENE 42 46232 - 47056 905 274 aa, chain + ## HITS:1 COG:XF1717 KEGG:ns NR:ns ## COG: XF1717 COG0325 # Protein_GI_number: 15838318 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Xylella fastidiosa 9a5c # 11 273 14 257 266 141 34.0 2e-33 MTAYMDHKNLANEVIDGVRAVQIADGVHRVLDRIASAEQHAGRDAGSVRLLAATKTRDVG EIMAAIDAGVRMIGENRPQEVMAKAEGLMARCGERGFALGVADDAGASTIAGEHIPFHLI GQLQSNKIGKVLPVVNTIESVDSLDLAEKISRRAVARGITVGVLLEVNESGEASKSGCDP SHAIRIAQKIGTLDGLELQGLMTIGAHVDDETAIRKGFEHLRKTRDHILESGEPGTQSCR ELSMGMTGDMELAVAEGSTIVRVGTAIFGERAFI >gi|222441568|gb|ABXX02000005.1| GENE 43 47186 - 48007 1026 273 aa, chain + ## HITS:1 COG:MA0585 KEGG:ns NR:ns ## COG: MA0585 COG0179 # Protein_GI_number: 20089474 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Methanosarcina acetivorans str.C2A # 55 271 37 244 244 173 44.0 4e-43 MRIARFSHNDVPQYAFVQTDESDGKDYLVALEGHPLAGAGVKPTGERFPVDGDGVRLLSP VIPSKVYGLAKNYEAHAQFMHEAGHSDIKHAPEDMVIFSKPSTSVIGPDDPIVIPSYSND MNFEPEVAVVMGRIAKNVTVEQAMDYVLGFTCVNDVTLRDLQGLDPMWTRAKGFDTSCPL GPWIVTRDDLDWKDAKISFTLNGEDVELASGTTANLIHGIPEQIAAISSFTTLLPGDVIL TGTPNASGHLDPGDEAIVHVEGIGSLRNVVVRG >gi|222441568|gb|ABXX02000005.1| GENE 44 48242 - 50944 1727 900 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens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gi|222441568|gb|ABXX02000005.1| GENE 45 51098 - 51982 618 294 aa, chain - ## HITS:1 COG:alr7635 KEGG:ns NR:ns ## COG: alr7635 COG2217 # Protein_GI_number: 17158771 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Nostoc sp. PCC 7120 # 58 189 79 219 753 63 30.0 6e-10 MGFDLFMTVAAIVAAAVATWAILRLFLSENDDIAPSHQRITDDKPAKNHTENHTENPDEA AGATHRSDIAKSLAIATILTAPTFTVTMLTFGGITLPHWLTNPWLHAIIATPVMFYCAAP MHNRGIAALKSHTPNADSLLSLAMTIVYVYSLLACVVSWIFPAGSRNQYFAFASMVAVLS LAISLIAQRPMAKKASEGDIPTAQSQEKQEIQSQETQETQQSMDTLIQASITYEIRTRVT QITATVTMVIAVWTFALWLIFGLQPKLAIAVLIGATVLTVAGLVLQAYDRQPSR >gi|222441568|gb|ABXX02000005.1| GENE 46 52155 - 53489 1513 444 aa, chain + ## HITS:1 COG:CT825 KEGG:ns NR:ns ## COG: CT825 COG1322 # Protein_GI_number: 15605560 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Chlamydia trachomatis # 84 417 57 381 427 195 34.0 1e-49 MFDNPVFVVILLVVVAVLGAAAGFFAGRSKGQEMARDAKTADLNEAKAQIEADRQEISEL STAVTQYRTQAEGLAQQLTYLKSQLAQAQRAEQERVERERERAAAEAERKQAENERKLQE QSKVLSALAPVQKNLDALQQKVSQIEEGRKREMGALGEQLKGLGEQQARLDRETNALSSA LRNNKVRGAWGEAQLRNIVESAGLLEHVDFDTQVVVTDVDGRTQRPDMVIHMPGGKTIPI DAKAPYADYQKACEIPDTATPEELTRKSELLHAHAKAVREHVKTLGDKAYWNAFADAPDF VIAFIPNESLLQAALETDPTLMDDAFARKVALTSPITLWAVLKSVAYAWQQQSLTDDAKM LFDLSRELYERFAVLGDRATKLGSAITKTVGAYNAFASSLESRVLVTARKLQRVDQSRII EPVNMIAPEKADIRELTAPETNEQ >gi|222441568|gb|ABXX02000005.1| GENE 47 53936 - 56896 3077 986 aa, chain + ## HITS:1 COG:CAC2107 KEGG:ns NR:ns ## COG: CAC2107 COG5492 # Protein_GI_number: 15895377 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 278 501 220 417 439 68 31.0 4e-11 MKRHSQRLRDILRRGLAIAVTVPMMVSFAPVAFAEDGAGTGNGSATPSASSGLNLLASYD FSDGTATDTSGNGYNLTMNGGAKVEAFGDRNNNQALSLRGNGQYASFPDELFAKAGNSFT MEFAAKSRHADDGNYFSFSVGGSQQKYLFWYLSTKSTKFVISDNKWNNEQGFKTSLSNND NIWHNYKLIVDGETLTMLRDGELVGYKANTGITMADLGSTAATIGKSLYSGDAYWSGAID DIKIYQGADVTLPSSVTIVGDGVLDGALTMVENSATKLTATVSPENAISTDVTWESSKTS VATVGSDGTVTAVGEGTTTITATTKAGGVSASVDVTVKPLDPATVVQFDLDSAISAVNEA TTENLPLISTGSKYGSTITWTSSNENVITGTDTNYQAPSVGSADPYKGAGVVTRPAYGDG DAAPVELTATAANADGSVTKTAKVSVIVKEKTREVPDEAYAAVTFLSDSDKTNGKTGEAL YMSATEGNNFFSFKEINNSNPVIESYADTKGLRDPYVLKSHDGDKYYMIATDLKVSAQGW GQNQQYGSLKVEVWESKDMVNWTRTNAADGDTGIKINVDNAGMTWAPEAYWDDSLGAYVV FFSSRMYTDDTRSTAVTSTNTGYAYNVLLYCITRDFKTFTEPVMWQDTNYSRIDSTVIKV GDYYYRFTKNEESGAAGSYITNGKSTFLERSKVLTATTEEASPDTDPETGWQLLDQRILP FEGPEAIKLNAGDKYQNEAGDAMVIMADSGGYQPYMTSESALLSCDWNNRLSQTDGWHTQ KDQNAGVSGYVYANGMPTPTRHGAFVNVPAAIAENMHRWTTANPTTPDATDSTTKLERGR DTLTATVTAKDGGNVAGSVVFTAGDWTETVKLNADGVATVTAPEGALGKVSKITAAYGGY TDNLVNVSDDAIEQTPDPDPTPDPTPDPDPTPAPTTKPGTTTTKKTAKKAAVVVNTGANV KGIALVAAILAIGGALAVLRRWKAAR >gi|222441568|gb|ABXX02000005.1| GENE 48 57077 - 63169 5213 2030 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_1446 NR:ns ## KEGG: BBMN68_1446 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 813 1959 298 1447 1664 749 43.0 0 MNTRKHLTVKRLTGAIVAAATMTAVLLVAPSTMASEPSALDKYKNESSLLVDLNFNDLTA GQTGTYQSGNIVASINGQTATGTGEDGTTAANLSSGFWMSLTSADGSAVLQGKHAITISY DSKPASSGNSGWTLYAARDAAKPTYGYEHYIGFLDKTDKITFERYNNTTGGRTGANVSGA SSVGWKHVDVVVSDESTTMYVNGTLVNSVEAKESHDLTEILGKDGGILQLGKANWGAEYF TGLIDNFKIYDSSLAAATDAFNAISVAQEATENFSVITESNGVPIVWSSDNNAIRFTEDG TAQVTRPAVGEADAVATLTAKLNGSDDQLRTFKVTVPHIISDDEKIQSDLDAVNILDADD IRSNFVVPTVGDNGSAITWSVKNDGGANASIAEGYNENNAKVSVNRPAAGKDSVNVTLEA TATNNGATANREFPITVSPMPSDQSKDEAYIWAFFTGEGVGGEKISLAASKGNNALDWNT LNEGTPLFTSTEGEQGLRDPFIMRSHDGDTFYMLATDLKISGRKGSFSAAQYNGSLYIEV WESNDLVNWTNQRHIKVSDDSAGNTWAPEAYWDDELGEYVVYWASNLYDNDDSSTRTSPS YNRMMYVTTPDFITFSKPKTWIDVDRRGQAGAGSIDVTVQKEGDTYYRIYKDEKSMTLRQ EKSNTLTDSIGKAGIKDYSTALSGSSWSEVGTAIGNDKSNGYGGTFSAGEGPSLFKANEG DVNGYQYYLFADQPSYHGGPNHYVPMATTDISDASKWTVIGDKMPEENFPVNSDGGKPRH GTVVPVTRAQYQTVLEAYAPSIAVKSVASVDVSTNAGTAPTMPETVHLTMADGSEQDADV QWDDIDADQYAKAGTFTVKGTAQDDSRMPVEATVTVSKPDDGKDDPKDDDAAKKAGYLWL YFNASDYEKINYGYSKNGLKWQALNDGEAIMSSTQGTKGIRDPHLIRLEEPDADGNKYVM LGTDLHAEGSASGGSWNQINASTYLVVAKSKDLVIWTDPELVSTGLEGKVGNAWAPEAIW DAEAGKYLVYWSSRDLSTGGDNPTTGNTALKVYKAYTSDFTTFENPQIWIDQSSADLHNI IDTTIVQGDDGSYYRFSTSDWYTVIDTADSLEAQKWTRLVERDSEVNADGTSKITGDKVV KTSESGLSTRIEGLTVYQGTDGAWIVMGDNGGYAGWTIAKLSSLKKSGTFSKASANFGQR FRHGTVVRLNVDEETAVLAAYGEHIAPNTPLAQQKNPIAQFTFDDEETGYTSDLAVAGIH GTAKLEDGNNGTKAARLGSGSWLSVTQTNGAALLLDATEFTVSYDAKPDSNGNTGWTFYA APSTAAPTYNQSEHYIGVLDKVGSVVVERYNTDGSRDGRGNASATTSGDGWHNVTVTVNA KTTRVYIDGVLAGESTDVSGLGVKEILGETGGILQIGKANWGSGEYYSGLMDNLTIWNRT LNANEIAQRNNAPALASITVGTVPTSSQADALRGTDKHSNVRTSMDCDAKTITSVVNNRA EINAVPVTFALTYDDASVTVDGKSFASGDKLDMSKKHTLVIECSDGNGGIVSEKWTLEKA VQSNNPVLPGQYADPDIDYFDGKFWIFPTTDGFSGWSGNYFHAFSSTDLVNWTDEGVILD VDKNHEPTTNGDENTAISPWSVGSAWAPTIEKKNGKYYFYYCAKLESGESAIGVAVADSP AGPYKAAKDPIVTRSMEGVTVGQAIDPSIFTDDDGTSYILYGNGSAAIAQLSDDMMSVVP GTVKRINGLNNFRESVVVSKRDGVYHWTWSCDDAGSANYHVEYGTSPSLFKEDGSVTDID NHGVLLQKDASKNLQGTAHQSEVHVVDANGEERWFMAYHRHYTPLGVFTSGLGFHRETAI DEITFDENGLMQTINPTDEGVSITMAKTDALSSAVADAAAVVNNGYDSGKWDAFVEARDA AKLALSKALDEGLSQADVDEASEALTAAQASLKSDSDKPGDSDKPGDSDNSGGNSGNSAG NGKNNTASKTGNKVANTGSAVSGVIAVMVLLVGAGVVLRRCVSGAGSETR >gi|222441568|gb|ABXX02000005.1| GENE 49 63422 - 64084 868 220 aa, chain + ## HITS:1 COG:no KEGG:BAD_1461 NR:ns ## KEGG: BAD_1461 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 220 1 223 223 343 86.0 3e-93 MTEEKTFRKTKPVAESTAATAGDTVNAAVDFAMLEPRDQLKSLLQAEMADKPFSELSSVL FDHRGASIVGHILLDTLEEAGYSVDDFDAVGALTAAAVPLVSAMIQAAASRGENLNGFVM DFVYPSIKGPSIAGKRVVLLDSWLSEKSYVQTSSLVTLRNGNELSLDFSVVKNEGAEVLA VASLIGGVDMADPSIKVVNPVDGSEAELPFVEVFKESELH >gi|222441568|gb|ABXX02000005.1| GENE 50 64154 - 64375 99 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352564|ref|ZP_03743587.1| ## NR: gi|225352564|ref|ZP_03743587.1| hypothetical protein BIFPSEUDO_04188 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04188 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 73 1 73 73 117 100.0 3e-25 MHDFPHIRRPIFRRQVTSVISSTIRPRSTSAIAALPTAILEIACRQPHPYCRLYFSFTHV SMNVSMIPTEQYP >gi|222441568|gb|ABXX02000005.1| GENE 51 64370 - 65320 634 316 aa, chain + ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 22 215 1 189 206 135 38.0 1e-31 MHQPNPIDIAAKASGEPAFREVGVGPWGQTHPGEPRPDDPQSPNYDRRFDTVLLDEGDRR NVLDRYRYWTVSAIKDDLDDHGRHDFEVAVENWTHDFNIGSMVRTANAFQAKRVHIVGPH KWNRKGALMTELYQHVENHPSIAELVECWKLRIAGEIAAVQSQAAAIAFRMRENAKKANC ACMSEAASLAEIRVAGCAPSGISMDVSATSGIEHGNESTCMAQLAAINQRIAELKAARVI ALDIIPGAVPMETYHFPKRCLMLFGAEGPGLSEKALELADDVVYISQFGSVRSINAGAAA AVSMHAWIAQHATIQP >gi|222441568|gb|ABXX02000005.1| GENE 52 65739 - 66035 511 98 aa, chain + ## HITS:1 COG:ML1703 KEGG:ns NR:ns ## COG: ML1703 COG0721 # Protein_GI_number: 15827909 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Mycobacterium leprae # 1 97 1 97 99 66 39.0 1e-11 MPTFTKEEIVHLGDLARIALTDEEITRLQGDLNVIAESINKVQEVATDDVEPTANPIPLE AYLRPDVPETPLTQEEATAGAPVSEAGMFVAPRILGEE >gi|222441568|gb|ABXX02000005.1| GENE 53 66037 - 67566 487 509 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 1 487 1 455 468 192 30 9e-48 MSELVKLSAAEMAAKIKAKEVSSRELVEAHLEVIEAAEPSIKAFLKVSGDQALEQADAFD AKSDEEKAQLPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPL LGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSAAAVAAFEAPLALGTDTGGS IRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDAALLQEVIGGHDKRDS TSIPESPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEEMGAEV TEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYTREAG FGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEKVDVLVGPTSPVTAFK FGEKTEDPMAMYAIDITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQRDEAMYKPA AALEAALEEDWNGPIWQSLKTPWLDGLNK >gi|222441568|gb|ABXX02000005.1| GENE 54 67592 - 69088 2179 498 aa, chain + ## HITS:1 COG:Cgl1230 KEGG:ns NR:ns ## COG: Cgl1230 COG0064 # Protein_GI_number: 19552480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Corynebacterium glutamicum # 5 497 8 500 501 569 58.0 1e-162 MAEKLMKYADAVKKFDPVIGLETHVELSTTTKLFCPAEVSFGGDPNSQLTPVSLGLPGSL PVVNKTAVDYAIKLGLALHCEIAEWSQFARKNYFYPDMPRDYQISQYDKPTNGNGYLDVE LEDGTVFRVPIERAHIEDDAGKNTHVGGADGRIEGADHSLVDYNRAGVPLIEIVTKPIVG AGDRAPEIAGAYMRAIRDIVRALNISHARMEQGNMRADVNVSLRNSPSDPFGTRSETKNV NSFRGIEKTIQYEIRRQAAILSEGGEILQETRHWDEASQTTAGGRVKSDADDYRYFPDPD LVMLHITKEHIEEMKAQMPEMPRERRNRLKGEWGFNDLEMRDVLNADALDLLEETVKAGA TAAGAKKWWLGELSREANNKGVSLEELPIAPADVAEVEKLIADGKLNDKLAKQTVAGVLA GEGTPDEVVKKHGFQVVSDDGALEKAVNEALAANPDIVEKLKSGNMKPMGAIIGAVMRAT RGQADAKAVTKIVMSKIK >gi|222441568|gb|ABXX02000005.1| GENE 55 69399 - 70502 1304 367 aa, chain + ## HITS:1 COG:VCA0947 KEGG:ns NR:ns ## COG: VCA0947 COG1670 # Protein_GI_number: 15601700 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Vibrio cholerae # 124 232 66 168 173 63 29.0 6e-10 MPEQVEAATQEQLDQQSRELPDLIVIPSIKGEMVHLRPSVIEDLERMDAIGAYIGASGIT GKDRVAERGAVHAWVRRSVAWSQGETPTESGVGDPESRRTIAWSIITEADHDGDGEIDAA NSDNVIGMIFLIDIDGWARSARIQVVLGKDYRGRGYSRDIMPRVMTYGLAPEPAGLGMHR IWVAVPEQNTRSVSVYQSLGFVPSGRSRDALWNASQNRYQDLIVMDTLVDEFDPIRSLDA FGMHVIEDNPGVKEALSAREHSIAIRLNEKNASKHDAEGTDVNDAAAAAQSVQKASSDGA GDVAEAVRKDAEGAEPARQSEHDDRKSVTGDADAENSWPYTAGERKTSKEAWWRTLGRGR KRDTEGK >gi|222441568|gb|ABXX02000005.1| GENE 56 70502 - 70813 512 103 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0108 NR:ns ## KEGG: HMPREF0424_0108 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 1 103 1 103 104 166 97.0 4e-40 MSAEDLDNYETDAELALYKEYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVR LTDAWVWDVYRSSRFVKNVRIVTFKDVNVEEVQKTDIDIPDSI >gi|222441568|gb|ABXX02000005.1| GENE 57 71073 - 72662 2162 529 aa, chain + ## HITS:1 COG:CC1101 KEGG:ns NR:ns ## COG: CC1101 COG1232 # Protein_GI_number: 16125353 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Caulobacter vibrioides # 1 527 6 482 504 298 36.0 1e-80 MTQKQSVVIIGGGPAGLTAAWELVKDGGSENYDVTVLEATREFGGISRTVKHDGNRMDIG GHRFFSKDERIMDWWKGVLPLQGAPSYDDKKLGREHDMEPGGPDPEVEDKVMLKRHRVSR IYWNRHFFDYPISLSANTLKAMGPKLTLVAGFSYLKSMVHKLPEDNLENFYINRFGRKLY SMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLLPKKRSNAEVETSLIE EFWYPKYGPGQLWETVEANCEAAGVKVITDANVVEIRQADGKIASVVYEDSEGNRTEMAA DDFISSMPVKDLINAVDASSQPAPKDMTEIANGLPYRDFVTVGLLVKHLRLSNTTDIPTL GNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYLVKDVDNTVWIGLEYFCEEGDSFWNMSD EEAKKFAIQELTRMQIINGPQDVIDSHRERVKKAYPAYFDTYDRMPELVEYLDSFGNLYC VGRNGQHRYNNMDHSMATAIEAVGNIKNGKTSKKNVWSVNTDKSYHEEK >gi|222441568|gb|ABXX02000005.1| GENE 58 72962 - 75112 2650 716 aa, chain + ## HITS:1 COG:ML1132_2 KEGG:ns NR:ns ## COG: ML1132_2 COG1158 # Protein_GI_number: 15827563 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 332 713 58 440 441 478 67.0 1e-134 MATSPNLEDMKLPELKELAKQMGLRGTSTMRKPELIATLQAARSGGEAPAGVTVRAPKSA APAAPVAPAEAQTADAEVAANTAEESGKSNEAAESKANEAEQSEKQTAKTVRKTLAGRAD SAERAERSEQTERAERTERADRRKQAEAPTSEEAADVMAAVNALDSIDEAPKRRRRRDAD AATDLLAELGLDDASPKQDDRRRHRKDDASDVEPRRRRRAVEGPKDEDVVRDLDDILATL PSQGSDDDERRDEAEDGDFARRGRGRVSDRGDRVDRRGRRLRGRDRDYDERDERRGRTGD RNNDRNERNDRVERNERTDRNVEREQRHEEPKEDLVPVAGIVDVLDSYAFVRTSGYLPGP NDVYVSMGQVKKYGLRKGDAVHGSIRTPREGDRRNQRQKFVPLQSIDSINGMTVEAAQNR PQFNKLTPLYPQERLKQETAPNKLTGRLIDIVAPIGKGQRGLIVSPPKAGKTITLQNIAN AIATNNPEVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPASDHTTVAELAIERAKRL VELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGGSL TIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAIDVNASGTRREELITD PQELPIIYRLRRLLGGLEPEQAYQTLVPRLKKTATNRDFMASLIQQSGNTANNGNS >gi|222441568|gb|ABXX02000005.1| GENE 59 75580 - 76056 541 158 aa, chain + ## HITS:1 COG:MT3390 KEGG:ns NR:ns ## COG: MT3390 COG1522 # Protein_GI_number: 15842882 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 18 157 5 144 150 124 50.0 7e-29 MTGNGNEPDTTHASVGQFDDIDETILSMLEKDGRATLSQLSDATGLSISAVQSRVQKLER RNVILGYKAVIDDEKRGLAVRAYIAVTPIDYSKEAEIPAKLQDIEGIMSCDSVAGSPSYM LTVRAASPSKLEDLLNVIHQTVPVSTETTIVLQRYFSK >gi|222441568|gb|ABXX02000005.1| GENE 60 76081 - 76494 475 137 aa, chain + ## HITS:1 COG:SMc03858 KEGG:ns NR:ns ## COG: SMc03858 COG1605 # Protein_GI_number: 15966994 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Sinorhizobium meliloti # 29 126 3 97 111 93 51.0 1e-19 MSDSEHDWLRPEEEHETETVIDAGTAQSNPEVADAVAKIAALRQSIDNVDTAIVSLLAER FKYTSQVGVLKARAGFAPADYKREDYQIERLHRIAVDAGLDPDIAEMYREFVVTEAKRRH KRIAENGVDPGVLDVFA >gi|222441568|gb|ABXX02000005.1| GENE 61 76662 - 78722 1681 686 aa, chain + ## HITS:1 COG:no KEGG:BAD_1451 NR:ns ## KEGG: BAD_1451 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 9 686 27 657 657 631 64.0 1e-179 MRVASVHLRHMLAASIAVTLVSAAPVCAVGVSNVVDAVRRNGEYVSAVASHDVMSAYESV DEPGRLYLTSDAASATDTDMNADEGATSSQRVPQERVELPWDITATFTLDGPTVSASKIS GASGVVGIRIDLKSERPEETADLTPIVAFTIPNRVGNDATSDEGVLVSAGNSSTLVAAVG KPGEDLTIHTYVTAKNFTMSSLSVAAVACDSERTGCYGNLTSLTDRASTLVDGLTNVGSQ RNHELIAQLEQLRDHEKELAETTIAQREQEHEQAFNGYIDAYVGSYTTHLSGSIGDTTQL TAILGTAAELNGDTAVAQSVVDLANAVNDVSAAYRHTGAADAVNEVIRTIEQRGTSGLVA ELNKRAGEEQQRGAKDYSAGQSQLSSAMIPYSMDFTDAYTARLKELGASAGSAQNLESQA IADVRNSIDGNEKLKSASSRVDDAMQALADASEHTGQASAFHQIVLRFADQLDAGDDSTS SDDTVDGSEVTLKGSMGLASASETSLAGRAERARIKAQRKEERAQADAANQQNASDGTAA SLVDDKNAISMDDVMSYAGGLRSSFGAAADTTSKNVAKVGGVESKKSSDGDSVDSASENT GTTGKTASSEMLMTSALPIAAYGIAGSGNRTLIVPDNSDLIDETVEIAAAAEILQQALQK LYPDMPVQSQPAKAAQSQYLLAVPVL >gi|222441568|gb|ABXX02000005.1| GENE 62 78895 - 81681 3995 928 aa, chain - ## HITS:1 COG:RC1053 KEGG:ns NR:ns ## COG: RC1053 COG0525 # Protein_GI_number: 15892976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Rickettsia conorii # 26 843 14 770 812 574 39.0 1e-163 MTESQDNTINANLTPLPDKVGVDGLEDKWREVWDESEVYKFQGTRDRKAVYSIDTPPPTV SGHLHVGHVFSYTHTDVIARFKRMNGYDVFYPMGWDDNGLPTERRVQNYYGVRVDTSLKY DPDFVPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLSIDWTQT YHTIGEHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTAVAQAELESREYPGFYHKVA FRFEDGTPIYIETTRPELLAACGALIAHPDDERYKPYFGQYVYSPLFHVKVPILAHKAAE MDKGAGIAMCCTFGDVTDVEWWRDLNLPLRSIIQRNGRIVMDTPDWIEDEEGKRIFQETA GKTTFSARKIIVDALRESGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDQK LNAELIERGRELNFHPDFMRVRYENWVNGLNGDWLISRQRFFGVPFPLWYPVKEDGTADY DHPIVPSEDRLPIDPTDDVPEGYSEDQRDVPGGFTAEPDIMDTWATSSLTPQIVTRWEEP GEENQAIFNATFPMDLRPQGQDIIRTWLFSTVDRAHLENKCLPWANATLSGWILDPDHKK MSKSKGNVVVPDKPIKQFGADAVRYWAAAARLGLDATYDEGQMKIGRRLAIKLLNATKFA LAIGREDENHHVGAPATASWNPADVTEPLDRAAMAKMALVVREATESLNNYEHSKALEVI ENYFWQFCDDYIELVKNRAYGTADSTGHVPSEKAVKSARTALGLGLDAFARLLAPYLPYA TEEVWSWMHEGEGSVHHAAWPKAETYDAAAAAVSPELLTHAGEALAALRGIKSKAKVSMK TPILSVQLGVSDEARESIESALGDIAEAGRVVGRISFMGAAAALKAVKETAEAAKEAVKE AKADAEAAIDVIVADSELGEPPAKKPKN >gi|222441568|gb|ABXX02000005.1| GENE 63 81810 - 83372 1713 520 aa, chain - ## HITS:1 COG:BMEII0284 KEGG:ns NR:ns ## COG: BMEII0284 COG0747 # Protein_GI_number: 17988629 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Brucella melitensis # 70 507 49 492 506 137 24.0 7e-32 MEDTMEEENGREAKLKAEITRWLIFFGVAIMLSVMTWLGWSLTNRKNPITSFTTLVSDSS VAIGIQGSAPESLDIRTEQGTALEQALLENVYETLVSRSETNKLQPSIAKSWQISDDGLT YTFTLNSNMTFANGHKLDSSDVVWSLQNVINNNYVGSDQLGSLKEITNPDEKTVVITLNQ PNPCLLRALSGRAGIVYDEESTANYGKKAVGSGPFTVEASSKTQIVLQRNDSYWGTKAAA SQITLYYYASEDSLVSAMEAKKISMALPLSASAADELNQQSGINSDSGISFDKVMLAFNN GTESPFSDEQIRKMTRYAIDAQTIAKDAPDAYSPLGGPISPLEDGYEDLSELFPYNLEQG QQMRSYFGAYYIADIDLLVPKEYEQIGNTVKSAIEQLNIGVNLEVLDSAAQVTERMNAGT YNIALTTMSGENDASVFTDGQSVFHYENGDVQQAYADAMAATNDDDYQARMRTYARAVSE NAASDWLYTRKNFMAVSDQLQGYPKNLTDRLLPLSRVKLQ >gi|222441568|gb|ABXX02000005.1| GENE 64 83415 - 84080 628 221 aa, chain - ## HITS:1 COG:Rv3674c KEGG:ns NR:ns ## COG: Rv3674c COG0177 # Protein_GI_number: 15610810 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Mycobacterium tuberculosis H37Rv # 20 217 5 197 226 210 52.0 2e-54 MPRESKQARLSRMHQEYAVLCEEIPHPKCALNFSNPFELLVATVLSAQTTDKRVNMVTPE LFGEYPGPAALASANPEHVESIIHSIGFHHTKAKNIIGLSYALCERFDGEVPQTMDALTS LPGVGRKTANVVLGNAFGVPGFPVDTHVIRVTGRLRWRSDWASGSPDPKAIEREITACFP PEEWTDLSHRLILHGRAICHARKPDCLNCPLNDTCPSAFAA >gi|222441568|gb|ABXX02000005.1| GENE 65 84217 - 84978 881 253 aa, chain - ## HITS:1 COG:MT0840 KEGG:ns NR:ns ## COG: MT0840 COG0745 # Protein_GI_number: 15840231 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 13 228 26 231 268 230 52.0 2e-60 MTDLTLMTFASDPATVLPSLALLSHRVRVLPMDAASLVKMPENTILFLDARDDLATAKTL CRLIHASGLSTPIVLVLTEGGFTVVNSQWGIADVVVASASPAEVEGRLRLVSERGNSPVN AVSGSGESGVQNEDGMIHSGDLVVDTNGYTASLHGHPIDLAYKEFELLKYLVQHPGRVFT RAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLGGEYEHVIGTVRNVGYRFDPPEEEEGEAA AKDAAAHNASSEN >gi|222441568|gb|ABXX02000005.1| GENE 66 85153 - 85911 942 252 aa, chain + ## HITS:1 COG:no KEGG:BDP_1972 NR:ns ## KEGG: BDP_1972 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 252 1 253 253 321 72.0 2e-86 MTASEKVAVKSAQKASFGKVFAVQIAAYVVLVVLALIPGISYGNAEEPAIVSFTVVASVA MIALLAVFNPFRDGVAGHAISVIAGLLSVVCATTMMLGRAIFPAGLGDEDTFWMQEGWIA GVGGLLILLIVVSFGRQMARENRTHLIRSLSHNVVEGVAMIGSAGWCFLSTLLPIRSGEN AASTDYGSTTAWAVAVIVALLLIIALDACSYWWNRDADPDPQSKNPWIGIALLPVMISGI VVGIASYATVMF >gi|222441568|gb|ABXX02000005.1| GENE 67 86067 - 86633 646 188 aa, chain - ## HITS:1 COG:Cj0167c KEGG:ns NR:ns ## COG: Cj0167c COG1971 # Protein_GI_number: 15791554 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 6 186 7 186 187 129 46.0 3e-30 MLIQTLLIAVSVSMDTFAVSIGKGLTVKKLRGLDAFKTALWFGGFQALFPLLGYFAASTF SKYVTAVDHWIIFGLLALIGGNMVREAFEEDEENAKETADFDWKHMLPLAVACSIDAFAV GVSFAFMSLNIWISVIIIGITTGLFSAAGLYIGRAFGSRWQKPAQIAGGVVLILIGVKVL LEHLGFLA >gi|222441568|gb|ABXX02000005.1| GENE 68 86827 - 87072 109 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVSRLRAVSSTRWRNLGTWRVWFCPFSSNRWRNLPAEKLICGHFLPVTGGIWTLEGMQK PVDVCECVRQRAFLGLLPKAI >gi|222441568|gb|ABXX02000005.1| GENE 69 87086 - 87580 773 164 aa, chain - ## HITS:1 COG:MT3730 KEGG:ns NR:ns ## COG: MT3730 COG0221 # Protein_GI_number: 15843240 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 5 160 3 158 162 178 58.0 4e-45 MAETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTSMGYPDDYGYIDGTLGEDGDPLDA LVMIPNSVFPGCVVECRAVGLYHMVDEAGGDDKVLCVPADVRFDDIKDVEDVSEYHKAEI KHFFEQYKALEPGKEVLPGDYWTGAAKAEEEIVAARKRLEESEK >gi|222441568|gb|ABXX02000005.1| GENE 70 87725 - 90013 2968 762 aa, chain - ## HITS:1 COG:Cgl1197 KEGG:ns NR:ns ## COG: Cgl1197 COG0366 # Protein_GI_number: 19552447 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 87 761 3 656 675 486 41.0 1e-137 MAEEDKSAEPRTTATKQPAVKKTTAKSAAAKTASATSQTPSKRTAAAKKSTASTARKRTT KAKAAAPQTVGEAPAPVIERTSPEQFGRVNVLDITPNVENGLFPARVELGEAFNVTAQVF IEGRTKAGATVSVRNARGREVERFAMTCTNPGLDRWEAMVKIGEHSDLKPWDADYAAVKR QLGKWQIVIEGWEDTYQSWLHDAAIKVKVNDDVENALESGAQLLARWADAKDSKLSAADK KVLRDAAKTMENKSLSAEERLAAVQSSDIEQLHETNPLRDGLSESNPQRFRVERPKSSFA SWYQFFPRSEGAYYGEDGKIVPGNLKTSIAGLERAAAEGFNIVYLPPIFPIGVTNRKGRN NSLVAGPNDPGSPFGIGSELGGHDTVDPQLGTMDDFKAFCERAHELGLEIALDFALQCSP DHPWVKAHPNWFRTKPDGTIAFAENPPKKYQDIYPIDFNADMEGIEKEVERIMDLWVKAG VTIFRVDNPHTKPVRFWQDVIAAVTKKHPEVLFLAEAFTRPGMMRALSYVGFTQSHCYFP WRNTKEELEEYLEETNGNGGFYQHNTFWPTTPDILTAYVRDNGIAGHAVRAVLAAMGSPS WGIYNGYELIENKQRPGFEEQIDNEKYEVKVRDWDSTEKYGIAELLTSLNKIRDTHPACR SYHNLHILPSDDAGVIAFLRQTPAELTGTGKADTMIVIVNLDGHNAHQSIVHIELGDFGF ATDKPLKVHDELTGRDFEWGYDNYVSLAPWADVAHVLTVVED >gi|222441568|gb|ABXX02000005.1| GENE 71 90282 - 91217 679 311 aa, chain + ## HITS:1 COG:no KEGG:BDP_1967 NR:ns ## KEGG: BDP_1967 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 270 1 269 610 227 44.0 6e-58 MNAMKRHTLAILAAVLAACIIIVGMTCPAALAAEQLLRANGKHYNYFLDGKPYVIGVNAE SRSGKFYYCRQIESMTDYKVTETTTVENTEAARRLAWLLSEYQHDGEPVLTYAAIGVLVH RNYDDQKVWVRHEQYLFSVMDGLESKVNELWEEAANKLPVSSRVTRDDRQGLRSGSLFVQ LLDSSGQPIEGVFTATIEGPAVFDEDDEPTAVGWAELEGTTVYWHATGAGEVNIKVGYQS VGLDEAVTAQKMMVLNDVVEREDSLLTFNVDNLYAPEQEMPQTGSPMGLVLGLAAAVMCC GAFMLYAVRRR >gi|222441568|gb|ABXX02000005.1| GENE 72 91469 - 93244 1911 591 aa, chain + ## HITS:1 COG:ECs3253 KEGG:ns NR:ns ## COG: ECs3253 COG0028 # Protein_GI_number: 15832507 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 10 573 2 563 564 570 50.0 1e-162 MRADAERQGADDRKVTDAPHYLARVLMANGIRNMYGVVGIPVTDFARIAQGMGMRFVGMR HEEDAVNAAAADGFITGRPAVTLTVSAPGFLNGLPALLEATVNGYPVIMIGGSSTRHVVD LEEGEYEGLDQMNYAKQFCKASLRIDRIEDIPLAVARAMHIASSGRPGAVYIDFPDDTVA QTLSQSEADRLMWTATDPAPAMVPARKSIDAALALLRQAERPLMVIGKGAAIARAEEEIR EFVKKTDIPFQPMSMAKGVVPDTDPHSTASCRSIALRNADVVLLVGARLNWMLSFGQGKT WNEHVKFIQIDINPEEIENTRSIDVPIVGDIRSAMTLLNGSLEEYPFKADETWLNMLKEA SAKNVAKFETREQSDQLPMSHFNALGAIKKVYNKHHEDLILTNEGANSLDDCRNIIDMLE PRHRLDCGTWGVMGCGTGYAIGAALSTGKKVLYIGGDSAFGFDGMEVEVACRYQLPITFV VLNNGGIYRGDFENLGADGDPSPLTLTYNAHYEKVLEAFGGKGYYASTPEEVERMVGEAV ESGKPSFVHVQIAQYAGKESGNIGALNPKPVVGALVDSEVTMYDYATGARM >gi|222441568|gb|ABXX02000005.1| GENE 73 93408 - 94502 1265 364 aa, chain + ## HITS:1 COG:ECs3252 KEGG:ns NR:ns ## COG: ECs3252 COG0679 # Protein_GI_number: 15832506 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 358 1 309 314 272 46.0 6e-73 MINILVDDIVPIIVIMALGYICGKFSYFDDDQRQGLNKLVLNIALPAALFVSIIKSTRAM LAKDATLTAISFIGVIVMFMVSYYLCRLLFHRSIQEAAVCALIAGSPTIGFLGFAVLDPI YGNTVSTNLVIAIISIVVNVVTIPIGMYLINLGQAKDRAKFSVQAENAVNAKANAKGDIT LDPARDAATDKTAELMVHGTSNTGKNRNGNLQALLDALKQPICWASLLAIFLVLVGIHVP SQVAPTFDLIAKANSGVAVLSAGLALSTVKFSLGWETIWNTFFRLILTPAVFLGVALLCG MGGDMNKISMLVMAVALPPAFSGIIISSRYNIYVKEGASTTAVATVAFAATCLLWIWLVP FCVG >gi|222441568|gb|ABXX02000005.1| GENE 74 94728 - 96134 1840 468 aa, chain - ## HITS:1 COG:ECs3254 KEGG:ns NR:ns ## COG: ECs3254 COG1804 # Protein_GI_number: 15832508 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli O157:H7 # 34 457 2 416 416 406 50.0 1e-113 MHYMNQANAHNATQDTTMQDSATHDTATKATQDTAPLKGITVIDWTQVQSGPSCTQMLAW MGADVIKVEKVQGGDPTRNEMNDVDGSYSLYFLQLNANKKSITLNMRDPEGKKILAELLK KADVFVENIGPGDVEKLGFGWNDVHAINPRLIMASLKGFNKGSRFEHVKAFEPVAQSAGG AASTTGWYDGERNVPTQSGAALGDSNSGMHLLIAILSALLQREHTGEGCYVYQSMQNAVL NLCRVKLRDQLILDRLGKLSYYDCYPNYEWGKQGKAIPRAANAEGGLVLGWCYRAKGWEH DPNAYVYIVVQQSKKGFENFCHAMGFEDWLTDPRFNTANARDEHKTEVYQRVEAYTMQFD KYTLTKELGAKGVPVGPVLDWYELENDPDLNGDGTIVTIDQQDARGDFKTIGMPFTMSNF VPDYQRAPKLGEHNREILHALGYDDDQIASLRDSGVIGGNDGVQADLK >gi|222441568|gb|ABXX02000005.1| GENE 75 96692 - 97726 1094 344 aa, chain + ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 302 1 302 303 307 48.0 3e-83 MPIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISK SPLQVEIDFMKTSTHEGTHVSADHLVKFYETIEAFQDNYYDGFVVTGAPVEHLDFEQVDY WDEFKQILDWASAHVFSTMYLCWGAMGALNYRYNVRKENLPEKIFGVFPQYLQDEYCFLT NGFDEICLQPHSRLAGVDEGDIARNPELQVLTWGPKSGPGLIATRDFSEVFALGHWEYGK YTLAEEYERDMKKGMTNVPFPENYFPHDDPQLEPVFAWRAHANLLWRNWLNWVYQTTPYD LSEVPQLRAQKRLGTDRSIRHQPGSPRVDAFAPFVRDGYGVIHD >gi|222441568|gb|ABXX02000005.1| GENE 76 98198 - 99007 945 269 aa, chain + ## HITS:1 COG:Cgl1179 KEGG:ns NR:ns ## COG: Cgl1179 COG0356 # Protein_GI_number: 19552429 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Corynebacterium glutamicum # 36 264 38 264 270 138 34.0 1e-32 MIGALGKGMLTIADGPEMPSVDDFLPDPFVFQGTPFAINRIILVRILATVIMLLVLGITA SRAKLIPSRWQGAVEWLIEFVRDNIVYQVMGELRGKRYVPMITTVFCTLLVFNLCGIIPG FNIAASATITLPLVFAMWCFCQYWIAGIREKGLGHFLRDEIFPKGVPAPIYILLSPIQLL ELLIIRPFSLTIRLFANMVSGHLILALCLSATQYFLIDVVNKVFMPFGVVTFAAGMFMFL FEALVACLQAYIFAILTTAYINMSYPEID >gi|222441568|gb|ABXX02000005.1| GENE 77 99064 - 99291 451 75 aa, chain + ## HITS:1 COG:Cgl1180 KEGG:ns NR:ns ## COG: Cgl1180 COG0636 # Protein_GI_number: 19552430 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Corynebacterium glutamicum # 13 74 18 79 80 64 62.0 4e-11 MDIVTLAEVAGNLNVVGYGLAAIGPGIGLGILIGKTIEGTARQPELGSRLQTLMFLGLAF VEVLALLGFVLAFIK >gi|222441568|gb|ABXX02000005.1| GENE 78 99348 - 99869 793 173 aa, chain + ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 10 170 22 182 188 106 38.0 2e-23 MVTAASEMELFLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQ AQKDADEAKAKYEAQLSKARVEASKIRDDARTEASHIIADARTRAENDAAQITATAQRSI ESQQQQALVSLKGEVGVLATALAGKILGSKLENDDVQSSMIDQMIADLDSDKK >gi|222441568|gb|ABXX02000005.1| GENE 79 99899 - 100726 956 275 aa, chain + ## HITS:1 COG:Cgl1182 KEGG:ns NR:ns ## COG: Cgl1182 COG0712 # Protein_GI_number: 19552432 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Corynebacterium glutamicum # 28 268 29 267 271 76 27.0 4e-14 MRGEASRIADRVSRDSLAPKLRDSGEDAWRIGNELFTITSALDHNIQLERALTDPSRPVE DKVAVVKTLIGDQAHPLVMEIMSDLVSRRWSRVSDIANAVEDFGVDGMMYYADYTNTTLQ VSIELAELHSALLNLPVVRTKLYDATVSSEARVKLLYSLIGDADFTKVTKRLAEHATCNL RNRRYLQTIQWLINKFSRHMGESMVTVTTATPLSKEQVEKLIAIYSAKTGHPVHINSVVD PTVMGGMRIQVGDEVTDNTVVAQLQHLQRTVKATA >gi|222441568|gb|ABXX02000005.1| GENE 80 100798 - 102426 2323 542 aa, chain + ## HITS:1 COG:MT1348 KEGG:ns NR:ns ## COG: MT1348 COG0056 # Protein_GI_number: 15840759 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 520 1 520 549 703 66.0 0 MAELTIDPTTIRKALDEFVESYKPSDTPTQEVGYVATAGDGIAHVTGLPGCMANELLTFE DGTLGLAFNLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPID GLGEIKTEGRRILEAQAPDVMHRHPVDEPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKT AIAIDTIINQKRNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEESGAMEYTTIVASPA SDSAGFKYIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPG DVFYLHSRLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDL FNANQRPAVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAMFASDLDAASKA QLNRGSHLTELLKQPQFSPYSMEQEVVSVWAGTHGKMDDLPLNDVLPFEKAMLDYLDHNT DILKTIRETEDFTADTEAALDKAVEAFRETFVTSAGKPLVEKKPNVKNATPVEQEKIVAG EK >gi|222441568|gb|ABXX02000005.1| GENE 81 102430 - 103350 1070 306 aa, chain + ## HITS:1 COG:ML1144 KEGG:ns NR:ns ## COG: ML1144 COG0224 # Protein_GI_number: 15827575 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Mycobacterium leprae # 7 301 8 294 298 211 41.0 1e-54 MGSQLALKSRIASTASLEKIFNAQEMIASSHIAKARDVALNAKPYTDAIFDAVQALVAHT HIDHPIVKKDEDNPRVAVLALTSDRGMAGPYTSSIIRETESLLARLDAAGKQPELYVYGR RGVTYYKYRNRDVAGTWEGDTDQPGVEVAESISKALMDAYMKPASEGGVSELYIVFTEFV NMVVQKVRVLRMLPVELVLPEQQDSGPVPESDADAATPLYAFEPSVDEVLDAILPKYIQS RIHECLLTAAASETASRQNAMHTATDNARSLIDDLTRKLNASRQASITQELTEIIGSADA LNKKEE >gi|222441568|gb|ABXX02000005.1| GENE 82 103359 - 104840 1977 493 aa, chain + ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 6 487 2 480 483 670 70.0 0 MAENQTTAAPETAAEPTTGRVTRIQGSVIDVEFPVGHLPDIYNALTVELTNTANEEGETT KKITLEVEQHLGDSTVRTVALKPTDGLVRGATVLDTGGPISVPVGDVTKGHVFDVSGNIL NKKDDETITVTERWPIHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGV GKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQP GTRLRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLA DEMGALQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYP AVDPLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIALIGIDELGEEDKTTVNR ARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDDL EKKWHDMQKEYGA >gi|222441568|gb|ABXX02000005.1| GENE 83 104840 - 105118 241 92 aa, chain + ## HITS:1 COG:no KEGG:BDP_1952 NR:ns ## KEGG: BDP_1952 # Name: atpC # Def: ATP synthase subunit epsilon (EC:3.6.3.14) # Organism: B.dentium # Pathway: Oxidative phosphorylation [PATH:bde00190]; Metabolic pathways [PATH:bde01100] # 1 92 2 93 93 156 91.0 2e-37 MAGLTMQVNIVAADHPVWHGTAKSVTIPAFEGGMGILPNHEPVLTVIKEGTIVVVDPDGS RRSFEVTDGFISFDSNKLTVAVERGRDVKMAE >gi|222441568|gb|ABXX02000005.1| GENE 84 105299 - 106003 810 234 aa, chain + ## HITS:1 COG:Cgl1188 KEGG:ns NR:ns ## COG: Cgl1188 COG1637 # Protein_GI_number: 19552438 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Corynebacterium glutamicum # 1 234 1 230 230 258 53.0 9e-69 MRIIVADCSAEYSGRLNASLPLAKRVLLIKADNSLLIFSELGSYKPLNWMAAPCTIKDIT PEHADDDVTTEVPQKVIRASADKSNDVLEVTLQHIYSDETYDLGEDPGLIKDGVEDHLQK YLAEQIERIGEGATLVRREYPTAIGPVDIMAIDGSGKHVAIEIKRNGGIDGVEQLTRYCE LLNRDPLLAPVRGIFAAQTITPQARVLAQDRGFDCLILDYDEMKGAEDDSLRLF >gi|222441568|gb|ABXX02000005.1| GENE 85 106063 - 107043 941 326 aa, chain - ## HITS:1 COG:VC0354 KEGG:ns NR:ns ## COG: VC0354 COG0545 # Protein_GI_number: 15640381 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Vibrio cholerae # 220 323 146 249 259 106 50.0 8e-23 MIATKVEPMRKSTLFKAVAAACTTIMCLGFAACGSSDTKSDSSSDSSSSSSDSSSKMNQI AGVTATGEPGEKPTVSFKTPMTVEDNSYVVLQKGNGDQIEDGDRICTQGIAINVKDGSEL MSTWEKNTPDCSTMVTSDTSQMTEDYYNIFKDQKLNATLAFGVNDSNSAGTSYLMVLTIV SKSKDLTKATGTKVLDVPADLPKVTLAKDGKPSIDMNGYKGSDTLISQDLIRGEGAEVKD TQTVIAHYTGWLLDGTQFDSSWDRGASSSFSLDEVITGWKQGLAGHTVGSQVLLVVPPDL GYGDKDSGKIPANSTLVFVVDILAAY >gi|222441568|gb|ABXX02000005.1| GENE 86 107101 - 108327 1104 408 aa, chain + ## HITS:1 COG:no KEGG:BAD_1423 NR:ns ## KEGG: BAD_1423 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 24 360 1 351 353 427 68.0 1e-118 MTLLQEEQEKPQSKAGPTRHAKIMRGIVTPIFGLLAIACIVLGVLNATIWKPSAQVTASA SVTGSQYVVTDPNVLQLVDDRVTISAKSRDKSANVCIAIGSARDIAGWIAGSKYTRVTGL SDWSTLSTLKTTAQGTADNSEGQVAFQDSDMWRTVKCNAGSVDMQFKGANTNNAEDSVAI IDYGNRKGGSVTLDWNRRSMLNFAMPFYLSGGLLAILAVLSASVFAMPPHKRRNKRAFAM VDGIGSTQGDDDEVAAWVKNAEASAARSEKSGPKRKRRRHAGHRASGSENSQNEVAQPTI VDPGARNLVADQQNAAADGVEENDDFEQTSVISQDELAAYFARLAQEESSAAAAASGSVE FAVSDEINVPNEVDEMAVTTESVGSNETSENDESDNDKSDEPDNEEAK >gi|222441568|gb|ABXX02000005.1| GENE 87 108327 - 109325 1105 332 aa, chain + ## HITS:1 COG:no KEGG:BAD_1422 NR:ns ## KEGG: BAD_1422 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 332 1 332 332 512 84.0 1e-143 MKKRFNVIAAAVLALGMVVGMCGCEGQLPQPKTTQRQDAPNLTAKQEKTIRTNILKTLDQ CNNDRNIDALGSILEGPELEIRTSELHVAQVTGNLDRKTTIPTDLAQAVISTDSGWPRSV FSITSTTDDQQSKRLLVFRQDSARQNYKLWGVARLFSGVKMPSFEISKTGSEQGTEKDTG LVMTPKDAVAAYADVLQNGASSQYAQKFADDDLRTKLADLTEQVQKAMELNEGSQQQVFT PVDDAISVMRSADGGDLVVAQINSEWTRSAGSGRESQPASDAEKALFGDGQATSTMKTTY VNVVALYVPPANSDAKITAVGSERQPVRVEAL >gi|222441568|gb|ABXX02000005.1| GENE 88 109429 - 110397 1336 322 aa, chain + ## HITS:1 COG:ML1159 KEGG:ns NR:ns ## COG: ML1159 COG3118 # Protein_GI_number: 15827586 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Mycobacterium leprae # 13 322 1 301 301 90 27.0 4e-18 MAGQRPFNPGVSLAGAVDLEALKHQVKAEPGQAGGAPAAGGYVIDTTENTFQAMVQTSAT FPILLLLWVPTDDRLFDMARQLGDAVNQLNGQIQLSRIDIASNSSIAQAFQVQGAPALFA LINGRPMPILQGLPSAEEMQQIVDTVIPNLVAAAQQAGVTGSAPYSGDPNSDAANSASAA GAQEQVPPEHQEAYMLAQQGDYAGAAAAYEKVLEADPNDARAARERAKALLLARSANANV REVRAAAADNPDDVEAQLAVADIDMIGGQIQDAFDRLLDFVAAGHKADIEPVRKRLLEYF TIPEPTDERLKRARRRLATLMY >gi|222441568|gb|ABXX02000005.1| GENE 89 110499 - 111137 632 212 aa, chain - ## HITS:1 COG:no KEGG:BDP_1935 NR:ns ## KEGG: BDP_1935 # Name: cyaB # Def: adenylate cyclase # Organism: B.dentium # Pathway: not_defined # 9 212 1 204 204 350 80.0 2e-95 MVEDSGRNIGDFEYTRRFFCRALPTQLDDNDSPTLIIQSYYVHQDNYALRVRLKTKSVRI AMTPDLDPLAVLEKYRDEFRLGSVTVKGPSVGGTRYEASRDLDSRIAGELIKRGGHVTIK NRFTDWIDEDGWNIDVFGGTNAPLIIAEAERIGPVTNLVIPKFCTTEITDQSRFSNEGLA ANPYSRWKSEFEDELEADGPQFLDYFGTNRME >gi|222441568|gb|ABXX02000005.1| GENE 90 111617 - 112006 640 129 aa, chain + ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 6 127 14 134 137 111 46.0 3e-25 MSEKMEAVATSEAPAALGAYSQAVKANGFVFVSGQLGIDPVTGELAGETAGEQAAQALKN IKHILDAAGTGIEHVCRATIYMKNVEDFHEIDDVYAQTFIGSVKPARVAFGGNNIPKGAL VEIDAIAVL >gi|222441568|gb|ABXX02000005.1| GENE 91 112244 - 113713 1269 489 aa, chain + ## HITS:1 COG:BS_ybgF KEGG:ns NR:ns ## COG: BS_ybgF COG0833 # Protein_GI_number: 16077309 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 26 467 12 454 470 489 57.0 1e-138 MAESQVNASTADTDAAESAEAKQGGLERKMETRHLTMISLGGVIGTGLFLSSGYTIHQAG PLGAIIAYGIGSMLVYFVMLSLGELSVAMPYAGSFHLYAKRFIGPGTAFTIAVLYWLNWA VALASEFTAAGLLMQRWFPDSPAWIWSAAFIAVVFMLNILSVRLYGESEFWFASIKVFAI IVFIVIGLLAMFGAIPIAGYDHAPLFENFYNDGWFPNGVLPIFSTLLTVVFAFSGTEVVG VAAGETKDPAQAIPKAVHTTVLRLAIFFIGSIAVMSALIPWHRSGVDTSPFVLVFQSIGM PFAGDVMNFVVLTAVLSAANSGLYVCSRMVWSLAQEGMIPRVLGKTNFHGVPVFAVLFSM AGSLLALLSSVVAASTVYLALVAVSGLATLVVWASVSVCHLRFRKQWLDQGHSADDLKYR APGFPFVPIAAIVMCIGALVLVICDSSQRSTLLYMIPFVAICYIGYYASVAWRRKHGELQ DDTRGDTQG >gi|222441568|gb|ABXX02000005.1| GENE 92 113745 - 115535 2215 596 aa, chain + ## HITS:1 COG:MT1331 KEGG:ns NR:ns ## COG: MT1331 COG0018 # Protein_GI_number: 15840742 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 596 1 550 550 535 50.0 1e-152 MSPEALSELIFNIANNLVNEGKAGTLTTDLIPPQAKFAVMRPKDRAHGDWASNAAMQLAK KAGMKPHDFAELFAAELANADGIKSVEVAGPGFINIVLDSASAAAVVDTVLNEGANYGKN DHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQIN RFAKSLVAAAHGEETPIDGYKGAYIDEIARRVIDEANADGIAILDLPRVDGGVDNDGNPL GEGDSEQREEFRKRAVPMMFDEIRKSMKDFRVNFDVWFHENSLYSDGEVDKAIADLRERG DIYEKDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLG ADHHGYIGRMMAMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTIDDLTDA IGVDASRYSLARTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYE GADVSLLDTAADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYHKWYNVERVVP MELTDPEARGEQAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVAAPDRM >gi|222441568|gb|ABXX02000005.1| GENE 93 115541 - 117121 1833 526 aa, chain + ## HITS:1 COG:MT1332 KEGG:ns NR:ns ## COG: MT1332 COG0019 # Protein_GI_number: 15840743 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 6 524 11 446 447 234 34.0 3e-61 MAVTPIWPAGSNVNEQGEITFHGRTAESLLNEFGSPLYVIDTDDVRARAAKFVKSAANAF NNTVTHVSFAGKALLSKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSD AEIELAITEGFAKIVVDEPNEPARIAEIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED QKFGVALLPVGADASKLNVLDDLADVTPAGSNARLGESEATPGESAERQLQYDIKYPYDM SHEKVSEGDRKLAEAMTMVADGPALAVLKEIYRHQDVLELVGVHSHIGSNIHDADAFIQA AKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDLDTELARLADAVTTVNRALG MPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQLAGTAKDKAGNPVTERVYVSVDGGMSDN IRPALYGSDYTARIANREGSSETKLCRVVGMHCESGDIIVNEVRLPADIQRGDVLAVPVT GAYGRTMASNYNQALIPAVVAVSEQDAHVMIRRQTVDDLLDWDVSE >gi|222441568|gb|ABXX02000005.1| GENE 94 117325 - 118641 1788 438 aa, chain + ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 7 436 17 442 445 324 47.0 2e-88 MVQEDVAPIRVGLLGAGTVGSQTARLLVEQKDELAARIGRPIELTGVACLDPSETDPFPW IDKSVVTTDTMSVATNADIVVELIGGTGVARKFVLAAIESGASVVTANKALLAKYGPEIY AAAEAKGVDIYFEASVGGAIPFLKPLRESLVGDKVTSMLGIVNGTTNYILDEMTTKGLDF DDVLKDAQAKGYAEADPTGDIEGYDAANKAAIMATLGFHTNVTIDDVSVEGITKITADDI AAATAENKVIKLLAVVENGEAGVSARVYPALISNEHPLASVHGSFNAVFVKAEAADDLMF YGRGAGGAPTASAVVGDVVTEARHIAQGCTGPTIPLYKDLKKAPIEASKAEFAVRFVIHD NPGVLAAIAARFAEHGVSINGVNQDLKPTLKDPGYDGELQQLRLVTHMTDELTLRETVKD VCALDCVVGEPSILRVLN >gi|222441568|gb|ABXX02000005.1| GENE 95 118839 - 119843 1347 334 aa, chain + ## HITS:1 COG:Cgl1158 KEGG:ns NR:ns ## COG: Cgl1158 COG0083 # Protein_GI_number: 19552408 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Corynebacterium glutamicum # 4 295 7 273 309 169 41.0 1e-41 MTPVTRKVRVRVPATSANLGSGFDTVGLALDYHDELEFTLSADPVNTAAQVMIEGEGADT LPRDETHLVVSTFRRACQTFGLGRVGFILQAHNNIPQARGMGSSAEAIVAGIAAAAAFAQ DDELNRDAVFELAAAIEGHPDNVAPAVYGGLTMSWDMETPEGVGSVPIPGGEPLHKGFHT INYRVADDLTAAVFVPDYELSTEKARQALPGQLAFKDAVHNVSRVSLLPAAMNPAMLATG QRQDVNALLFAATQDRLHQPYRAPLMEPSWTLIEKLRSHGFASMVSGAGPCVLVLHHGDA REQLGQLASEELASGHWRVLHLGVDTKGVQVERA >gi|222441568|gb|ABXX02000005.1| GENE 96 119840 - 121312 1276 490 aa, chain + ## HITS:1 COG:Cgl0685 KEGG:ns NR:ns ## COG: Cgl0685 COG0424 # Protein_GI_number: 19551935 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Corynebacterium glutamicum # 168 302 65 197 197 130 51.0 4e-30 MNNSIPLILASKSKPRRDVLFSAGICPTIRVSNVDEPAALEREAAAMGVAVSDLSVEQRV MILATAKAEAVHQAYRNVAATAAAAHGDRVVGFPLKAVAESSEHSDNAENTGDSASLEHH RVTLRADEVQSASDVKTRDFSGVTIPTITESIADFVDGKPSLTRAKVGPLILGCDSMFLL DGECYGKPHSAEVARERLRAMRGATGELWTGHCLIDFATGRIARGASRATLHFCEYSDTD IERYIATGEPLEVAGSFTLEGFGGAFIDSIEGDPHGIIGLSLPLARRLAAELGVEWTDLW NVTRADQEPNVEHDSRTGAAKPLPPKENVHQPGDGWIDCDCGRKHWGTNGASGVLLARRS EQTGEVTHVVMQHRAVWSAEGGTWGIPGGATADGESPIEGALRESYEEANITPEDIDVVG SYCEDHGPWAYTTVFAFEKPGHRVEPKANDDESMEIEWVPIEEVPNRKLLTAMRTDWPNF AARLAQMAEK >gi|222441568|gb|ABXX02000005.1| GENE 97 121389 - 122507 822 372 aa, chain + ## HITS:1 COG:YPO0849 KEGG:ns NR:ns ## COG: YPO0849 COG1609 # Protein_GI_number: 16121157 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 9 371 3 336 357 133 29.0 5e-31 MAGKRNAANKRPSMFEVAKMAGVSHQTVSRVINHSPDVSDATREKVQKAIDALGYRPSNS ARALASHRSRTIGLVAGGQRFYGPISAISSIEAMARQHGLFMSVSMVHEALCSQAEFDEL CSTFDEMNVDAFIFLTPTDVMFSAACRAQITQPRVIVTSTHGSISVQDGLRLMKPADRRR VSVVGVDQWSAMADVMHLVVEHGHRSVLYFAGPKEWRDAATRLMAWNKLCAANAVSSVTV QCETWESTEAYGKMNHILENIGRTGGNLPTCMVCANDSQAVGVSRALHEHGMRIPQDVSL VGFDDMPAMDNMYPPLSTVRPDFEQLGVAAMRETLFLLGEGDENSFASSQHGVGLIPAKV IGRTSLGTASRR >gi|222441568|gb|ABXX02000005.1| GENE 98 122765 - 124402 2268 545 aa, chain + ## HITS:1 COG:CAC1344 KEGG:ns NR:ns ## COG: CAC1344 COG1070 # Protein_GI_number: 15894623 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 16 540 9 533 534 618 56.0 1e-176 MAQEQGLDDRIALTAEKIRAGKTSLGIEFGSTRIKAVLIDDTYTTIAAGDYGWASHLEDG LWSYSQEEIWTGLQTAYAALAEDVENAYGEKLTRVGRIGFSAMMHGYLAFGKDGELLVPF RTWQNTNTSEAHEKLSELFQYNIPERWSIAHLYQAVLNNEEHIGKVDFFTTLAGYVHWKL TGKKVLGVGDASGMFPIDPTTHTYETEFIEKFNAIPEVAAQPWKLADLLPEPLVAGTPAG TLTEEGAKLLDPTGTLQPGITFAPPEGDAGTGMVATNSVRVRTGNVSAGTSIFAMVVLER KLERLHPEVDLVTTPAGDLAGMSHANNFTSDLNAWVGLFGQFAAAIGTPVDAGTLYGTLF RAAIADDVDSNCGGLINYPFRSGEFLAGLPEGRPLFARGPEARMSLGNFMRAQLFSAFSP VKIGMDVMTKDEGVAVDSLVGHGGIFTTPKVAQKILAAAFDTPIKVMSTAAEGGAWGMAV LADYLWHADQPLDEFLDARVFADAASTTENPDEGDVAGFEEFFDRFRKGLPIEHVAIESI PLETK >gi|222441568|gb|ABXX02000005.1| GENE 99 124446 - 125138 656 230 aa, chain + ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 19 229 48 253 254 158 40.0 6e-39 MATLADYGPEVRAEVKQVREVVATLHEQLIKWNLVVWTAGNVSQRLHTADLMVIKPSGLR YEYLTPSSMVVCDLDGNVVDGSEAPSSDTASHAYIYRHMPDVYGVVHTHSTYATAWAATG QNIPCGLTMMGDEFGGPVPVGPFRLIGSEAIGEGVVETLREYPKSPAVLMQNHGPFTIGK DAESAVKAAAMTEEVAHTMWAARQLGEIIPISDEDIAKLNDRYTNVYGQH >gi|222441568|gb|ABXX02000005.1| GENE 100 125283 - 126800 2083 505 aa, chain + ## HITS:1 COG:YPO2253 KEGG:ns NR:ns ## COG: YPO2253 COG2160 # Protein_GI_number: 16122477 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Yersinia pestis # 7 502 4 499 500 474 46.0 1e-133 MAMENPFEGKEVWFGVGSQDLYGEEALRQVAEQSGEIVDALNATGKIPVKVVLKPTLKSS DGVKAFMVEASANPNVIGVITWCHTFSPAKMWIRGLEVLTKPLLQLNTQHHFEIPWETID MDFMNLNQAAHGDREFGYILTRLGINRKIVVGHYTDPAVAEEIGTWARACAGWDASNNMK VMRWGDNMRNVAVTEGDKTEAERVFGASINTWAVNELVAAYEAVKDDQVKSIIEDYKVKY DVDPALLDAKYDSLFIAAKEEAAMVNMMRANGCTAGVDNFEDLGALPQLPGVGPQRFPSE YGFGFSAEGDWKTAVLVRIGAVMGYGLEGGASLMEDYSYNFTPGNEMIMGSHMLEVSPSV GTIAKPKLEIHPLGIGGKADPVRLVFTVAPKKDAVVVSMSDVRERFRLTMNLVDVVEPLG ELKQLPCARGLWKPQPDLKTSAECWLRSGASHHTCMTTSVGREAWEDFARIAGVELATID ANTKAAEFERDLEISEMYHRLNNRH >gi|222441568|gb|ABXX02000005.1| GENE 101 127115 - 128938 2031 607 aa, chain - ## HITS:1 COG:MT2242 KEGG:ns NR:ns ## COG: MT2242 COG1022 # Protein_GI_number: 15841677 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium tuberculosis CDC1551 # 30 599 30 597 603 449 44.0 1e-126 MLTEYTTPGESVEVRDDESIYSLLTGRIARTGEDTVIAEHKTAPGQWTKVTTGEFHNAVL AAAKGLIAFGINKGDAVTIFSTTRYEWGVLDFALAAIGAVNVPIYDTDSAAQAERILNDS DVKLAIADNRERFDRLDSVIDRCPSLKHILMLDSNAMGALEGLGVTVSDEELEARIDSVH ADDLATIVYTSGSTGAPKGAELSHRNFISITRAGSLALHEIVLEDHPRLLLFLPLAHCFA RFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASRKAGTGWKG RLFLKAAEAARDWSRMQQAGERPTAKQIAQHLSYEASVYRTVRSALGPRIRYVACGGAPL DVSLAHFFNGIGLPMIQGYGMTETAAPFAATRVTDNVIGTVGQPAPGSSVRISDDGELQV KGPNVFRGYHNLPEKTAEAFTEDGWLKTGDLASIDDEGRITITGRKKDIIITAGGKNVSP IPMEQEIVKCPIVEHVVVVGDNRPFIGALITLDPEGLEAWLPSIGLSADTPLDRVAATAA VHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCLTPSLKVVRPAVNRVFAQVIDQ QLYSGKR >gi|222441568|gb|ABXX02000005.1| GENE 102 129609 - 133706 2937 1365 aa, chain + ## HITS:1 COG:PM1474 KEGG:ns NR:ns ## COG: PM1474 COG4988 # Protein_GI_number: 15603339 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Pasteurella multocida # 21 666 1 554 561 387 36.0 1e-106 MFDKRLFSLAPGVGRLVAAKVLCQWVGLLANVVFVVTVVVMLSPALAVVESAFDPMFSMG DSGLISRLFIGFGYGGFSAETYVGCVLAIVVCAVLRFLMMRAAAYFGAEAAERVKLALRE QLFNKMLAIGPSYSQHISTADVVQSAGEGIEQIQSFFELFLPQLFYAILAPVTLFFIVAP INMPTAVTLLVCAPLIVLIVGMVAMRAARVFKKYWGKYTDMGSVFLDNVQGLETLKTFDA DAHAAKKMGEQAEQFRVMTMNVLQIQLRSLTAMDVVAYGGAAAGVGVSIWQYASGAALPL AGVLLIVLLSADFFIPLRQLGSFFHVAMNGMTSTKRIFALLDTPIPAHGMQEMPEFGASD NGVDVCFDDVSFRYVDVNTDAAAAVSVAADTAVTADMETGKTGQIGGKSGVVGAGKTGMS KDDDGSVVALHGVSFTARRGQVTAIVGPSGSGKSTAVELLSGNLSGYEGCMWLQSGNTGN NSTQRYQINDLSIESLTREIAIVAAQSHLFAGTLRDNLLMAKPDATESELWQALEAAHIS DFVRAQSQELDLAIEQGASNLSGGQKQRIAIARALLREPAVYIFDEATSSVDVESETLIL QTIRALADRGKTVIMVTHRMANAADADHVVVFEHGRVAEQGTHAELMRANGTYAKLFHAQ QTVENIGLRNNATHSTSASHALKASDSAESVTQRAEMGLQVSDSAETDAQGAKTGVRMSD SAESDAKTIPTSRLIARLLKEVGPQRKYMIVACVCGTLGHLAATFLPVFGIAAAFAAVGS PVWNLSVLAALAAMAVCALIRGGMRYAEQFMNHNVAFRLLALFRAKAFAALRRLAPAKLA GKGKGDLIALVTTDVELLEIFFAHTISPVVIAIVTTVVYALALLTLSPPLAATLIIAHLI IGVILPKLFASAVRGIGPELRKESSALDDEMLDDMRGIGEIIRFGQGDARLASIQRRTRS LWVKRVRLSVKNGDFAGFGAVLVMLFTAIAAFLAMTLCTAVSTAADMSEGLMWMGSVGSN APALVAAFVLLASSFGPTLALSALPANLTQTFASARRLFALMDEAPAVVEQGSERPEYQG MTMRDVTFGYGSGARISVERTPNGRSEHATGMSPARPAEAQSSGEQGAGIASQPVLDHVS LDVSRQGILGIQGPSGRGKSTMLKLLMRYWDPDSGTISLSDVPLPQVDAGWRRRVQTMMG QETYLFDGTIRENLAIACNDADFSDSDSNSGSNFCSNSSSNAGGNSADSSDSDLAHDIPD SVLREALAKASALELVDALPNGLDTRVGELGGRLSEGEKQRIGLARMFLRDADLVLFDEP TSRLDAYNESVILGSINDLAERGSAVVLVSHRDSTMRIADRILRM >gi|222441568|gb|ABXX02000005.1| GENE 103 134070 - 134945 1272 291 aa, chain + ## HITS:1 COG:SP1468 KEGG:ns NR:ns ## COG: SP1468 COG0214 # Protein_GI_number: 15901318 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 291 1 291 291 411 78.0 1e-115 MANNRNELNKNLAQMLKGGVIMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRM SDPAMIKGIQEAVSIPVMAKVRIGHVAEARILQAIEIDYIDESEVLSPADDVYHIDKNQF DVPFVCGAKNLGEALRRIAEGASMIRTKGEPGTGDVIQAVRHMRTMNKQIRELVSLRDDE VYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS GDPAKRAAAIVQATANWQDADLLARLSENLGEAMVGINEDEIETIMAARGE >gi|222441568|gb|ABXX02000005.1| GENE 104 135059 - 135802 846 247 aa, chain + ## HITS:1 COG:SP1467 KEGG:ns NR:ns ## COG: SP1467 COG0311 # Protein_GI_number: 15901317 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 29 247 4 188 193 164 40.0 1e-40 MVVAVEYISKEESTDVAEGAASAQHGVTGILAVQGAFAEHAAMLDRLGAPWKLLRAAEDF DDSIDRVILPGGESTTQGKLLRSTGLFDPIAAHIAAGKPVFGTCAGVILLARRLDNDENV YFGALDAVVRRNAYGRQLGSFAASADFGASDDADAVVVASGESVSSAISAAAGEEGTSEA SDTSVVLKDFPLVFIRGPFVAEVGERATVETSVDGNVVGLRQGKILATAFHPELTDDTRI HELFLSL >gi|222441568|gb|ABXX02000005.1| GENE 105 136305 - 137666 2139 453 aa, chain + ## HITS:1 COG:BH1924 KEGG:ns NR:ns ## COG: BH1924 COG1653 # Protein_GI_number: 15614487 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 407 1 390 426 131 27.0 3e-30 MRNMKKALAAVAAVATLASLAACGGSDGGNDAKANAGDADKADLVFWGWDTGNTMKALIA DFEKANPGITVKFNNTGTASDTQTALSNAVAAGKGAPDVVMLEDPTVTQFAVTGDLVDLT AYGADKLEDDFSAGPWSKLQYDGKPYALPIDSGPEVFFYNDAVLKKAGVDGSQIKTWDDY YEAAKKVKAIGAYMTNNSGSSMEYQPFTAQAWQAGAQPWKVDGENITIDMTKDSGMKKYI EFQQKLIDEDLVDTKIANWSDDWNRALNEGDIATLTIGAWMPVNLMNGAPDQAGNWRVAQ LPQWNEGDEVSAEDGGSALAVVSQSKQQAAAYKFVEYLTHGDGAQTMADTGTFPSLKKIL SSDSFTDPNTEANKKVNDYFGGQNVNEILSEAAQRKVSAFQYLPYNPYAQSTFGDQISKA YSEDITLEEAFVNYSKALTDHGNQQGYTVTSKD >gi|222441568|gb|ABXX02000005.1| GENE 106 137951 - 138952 1042 333 aa, chain + ## HITS:1 COG:BH2725 KEGG:ns NR:ns ## COG: BH2725 COG1175 # Protein_GI_number: 15615288 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 30 275 11 255 290 136 34.0 7e-32 MSQQAAVAADALHTPADQVRVNRHRADWRGWKFMWPFALVFVFVFVIPILYAIYISFFQK QMIGGTKFVGISNYIRLFHDQQFWSSVGRVALFTCVQVPIMLFLSAAMALALDSMKLHGA KFFRISTFLPYAVPAVVSTLVWGFMYGAKYGLVGSLNDWLGTNLDVLSPSVLLASIGNIV TWEFTGYNMLIFYSSLSTIPHSLYEAASIDGAGEWQIVKSIKLPELKGSLAITVIFSIIG SFQLFNEPSILQNMVPGNAITTYYTPNMYAYNLSFAGNQSNYAAALADHDGRDHDGDRVR GAAQQHEGADEVTPGGANHPHIGEETLRSIENE >gi|222441568|gb|ABXX02000005.1| GENE 107 139147 - 139959 966 270 aa, chain + ## HITS:1 COG:SP1681 KEGG:ns NR:ns ## COG: SP1681 COG0395 # Protein_GI_number: 15901516 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 12 269 30 278 279 133 32.0 4e-31 MCALFAVYCLFPFVYLLINATKTQADFTSTFGLGFGRTFALWDNIKTVFTYQDGIFGRWF LNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAVPQFLLFA KLNLTNTPWAMIIPSLVSTFGLYLMWIFSEQAVPTELLEAARVDGASEFRTFFQVSLPLL APGIVTTALFTIVATWNNYFLPLIMLKDSNWYPLTIGLNQWKDQASTAGGQAIQNLVITG SLITIVPLVIAFLCLQKYWQSGLSAGAVKE >gi|222441568|gb|ABXX02000005.1| GENE 108 140359 - 140481 135 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQNNTFDQIASANTVSMDAGLSQFAFAKASSTLFKKVFSK >gi|222441568|gb|ABXX02000005.1| GENE 109 140627 - 142396 1391 589 aa, chain - ## HITS:1 COG:FN1984_1 KEGG:ns NR:ns ## COG: FN1984_1 COG0492 # Protein_GI_number: 19705280 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Fusobacterium nucleatum # 6 319 4 316 332 295 49.0 1e-79 MSRNDLYDVIVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITNEVVNYPGVGRTT GRALTQTMRQQAQDFGAEFLSAEAIGLDVHGDVKTVHTSRGDLKAFGILIATGASPRKLG FEGESEYAGRGVAYCATCDGEFFAGKEVLVVGGGFAAAEESVFLTTYASKVTVLVREQDF TCDAAVAAAAKNNPKIDVRYQVELQGVTAGQGGLREASILNRATGQTETWKPVDGGTFGV FVFAGYVPATNLVRGVVELDDYGYVVTHGYLETSVPGVYAAGDLRAKNLRQVVTATADGA IAAVELERYAKRMSEKTGLTPQRPVSCAYEQSTTKTDAASLDATAPTPTPAPATKRNADA AANAVRKPGELFSDATRQQLNVVFGRMSRPVTLALELDDTPLSTELRGFIDALVALSGGK LKSTVDDGEYEKDDTGRAVFDVDSVLPAARPCVRMVVDGEPTGLAFHGVPSGHEFNSFVL GLYNVAGPGQPLGDDLIERAKSIASPLNIMILVSLTCTMCPETVLASQRLASLNPAVRAE AYDVSHFPELKDQYGAMSVPCIVITRADGTQRVEFGKKSIPQMLELVGA >gi|222441568|gb|ABXX02000005.1| GENE 110 142500 - 143063 666 187 aa, chain - ## HITS:1 COG:FN1983 KEGG:ns NR:ns ## COG: FN1983 COG0450 # Protein_GI_number: 19705279 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Fusobacterium nucleatum # 1 187 1 188 188 237 58.0 1e-62 MTLLQHELTDFKVNAFQNNEFHEVTKADVLGHWSLFFFYPADFTFVCPTELEDLARNYAK FKEIGCEVYSVSCDTHFVHKAWHDANERIAKIQYPMLADPTALLAKDLDTYNEVDGMAER GDFIVSPEGKVVAYEVISSNVGRNAEELLRRVQASQFVHEHGDQVCPANWTPGEDTIEPS LDLVGQL >gi|222441568|gb|ABXX02000005.1| GENE 111 143173 - 143757 -306 194 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLPGASEARMLNTCSIGRRWKPREGWSRPVLTGERGTLFPTRLLGRVSSCGGFFRWMAR SIVSCGHGNDTGEAFGCSRPLSGSRTATIGIVAWFRFCRPILVVGRYIGFAVVMAQVRRP VPFRTRKLRPGRGDGTALERVWESSTPPHSTSGFPSSVTLREPLFLSFGSCFPRRAGGSQ STTPLHRMVRQRDC Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:38:05 2011 Seq name: gi|222441567|gb|ABXX02000006.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont5.1, whole genome shotgun sequence Length of sequence - 114296 bp Number of predicted genes - 92, with homology - 83 Number of transcription units - 65, operones - 17 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 42 - 82 -0.5 1 1 Tu 1 . - CDS 212 - 643 67 ## gi|225352637|ref|ZP_03743660.1| hypothetical protein BIFPSEUDO_04265 2 2 Tu 1 . + CDS 582 - 782 60 ## gi|225352638|ref|ZP_03743661.1| hypothetical protein BIFPSEUDO_04266 - Term 753 - 783 -0.5 3 3 Tu 1 . - CDS 930 - 3392 1874 ## BAD_1517 transmembrane protein alanine and leucine rich - Prom 3442 - 3501 2.1 + Prom 3356 - 3415 2.8 4 4 Op 1 36/0.000 + CDS 3614 - 4939 1641 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 5 4 Op 2 . + CDS 4936 - 6135 1456 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component + Term 6186 - 6245 20.2 6 5 Tu 1 . - CDS 6254 - 7045 847 ## COG1418 Predicted HD superfamily hydrolase - Term 7099 - 7136 1.0 7 6 Tu 1 . - CDS 7168 - 8052 1093 ## BAD_1521 hypothetical protein - Prom 8127 - 8186 2.8 - Term 8179 - 8239 22.1 8 7 Op 1 . - CDS 8254 - 10431 2192 ## COG3158 K+ transporter - Prom 10484 - 10543 3.1 9 7 Op 2 . - CDS 10664 - 11620 647 ## COG0084 Mg-dependent DNase 10 8 Tu 1 . - CDS 11742 - 14102 2760 ## COG3534 Alpha-L-arabinofuranosidase 11 9 Tu 1 . - CDS 14348 - 14491 115 ## BAD_1525 alpha-galactosidase - Prom 14687 - 14746 4.6 + Prom 14594 - 14653 5.4 12 10 Tu 1 . + CDS 14735 - 15967 969 ## COG1609 Transcriptional regulators + Term 16090 - 16135 1.5 - Term 15955 - 16011 20.1 13 11 Op 1 . - CDS 16053 - 18491 2132 ## COG3345 Alpha-galactosidase 14 11 Op 2 . - CDS 18655 - 19377 834 ## BDP_2103 hypothetical protein - Term 19518 - 19553 -0.7 15 12 Op 1 35/0.000 - CDS 19572 - 21359 1974 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 16 12 Op 2 . - CDS 21390 - 23252 221 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Prom 23422 - 23481 2.3 + Prom 23442 - 23501 3.6 17 13 Tu 1 . + CDS 23652 - 24749 1216 ## COG0657 Esterase/lipase + Term 24797 - 24843 12.4 + Prom 25181 - 25240 2.9 18 14 Tu 1 . + CDS 25268 - 25456 136 ## 19 15 Tu 1 . + CDS 25568 - 26389 702 ## COG0657 Esterase/lipase - Term 26469 - 26495 0.3 20 16 Op 1 . - CDS 26588 - 27769 1109 ## Blon_0046 hypothetical protein 21 16 Op 2 38/0.000 - CDS 27788 - 28666 1228 ## COG0395 ABC-type sugar transport system, permease component 22 16 Op 3 35/0.000 - CDS 28735 - 29640 1144 ## COG1175 ABC-type sugar transport systems, permease components 23 16 Op 4 6/0.000 - CDS 29837 - 31144 1925 ## COG1653 ABC-type sugar transport system, periplasmic component 24 16 Op 5 . - CDS 31392 - 32414 864 ## COG1609 Transcriptional regulators - Prom 32533 - 32592 3.0 25 17 Tu 1 . - CDS 32915 - 35167 2027 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - Prom 35265 - 35324 2.0 + Prom 35200 - 35259 4.7 26 18 Tu 1 . + CDS 35414 - 36724 1190 ## AAur_3218 putative glycosyl hydrolase family protein 27 19 Op 1 . + CDS 36836 - 39292 2388 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Prom 39326 - 39385 1.6 28 19 Op 2 . + CDS 39425 - 40441 1149 ## COG1609 Transcriptional regulators + Term 40462 - 40510 10.1 - Term 40250 - 40289 2.3 29 20 Tu 1 . - CDS 40535 - 41890 1208 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 30 21 Tu 1 . + CDS 41744 - 42082 158 ## - Term 42103 - 42153 6.7 31 22 Op 1 . - CDS 42181 - 42993 1010 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 32 22 Op 2 . - CDS 43064 - 45106 1361 ## Blon_0459 glycoside hydrolase, family 20 33 23 Tu 1 . - CDS 45234 - 46166 338 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 34 24 Op 1 38/0.000 - CDS 46272 - 47231 1134 ## COG0395 ABC-type sugar transport system, permease component 35 24 Op 2 35/0.000 - CDS 47228 - 48172 1086 ## COG1175 ABC-type sugar transport systems, permease components - Prom 48309 - 48368 1.8 - Term 48333 - 48380 4.4 36 24 Op 3 . - CDS 48434 - 49741 1733 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 49787 - 49846 5.7 + Prom 49883 - 49942 4.6 37 25 Tu 1 . + CDS 50036 - 51160 899 ## COG1940 Transcriptional regulator/sugar kinase + Term 51355 - 51394 -0.4 - Term 51447 - 51495 8.1 38 26 Tu 1 . - CDS 51525 - 53084 2137 ## COG2211 Na+/melibiose symporter and related transporters - Prom 53132 - 53191 4.8 + Prom 53298 - 53357 4.4 39 27 Tu 1 . + CDS 53445 - 56507 3511 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 56539 - 56588 7.7 - Term 56527 - 56571 7.2 40 28 Tu 1 . - CDS 56643 - 57341 695 ## COG0819 Putative transcription activator - Prom 57443 - 57502 2.1 + Prom 57138 - 57197 5.7 41 29 Tu 1 . + CDS 57333 - 57632 140 ## + Term 57814 - 57859 -0.4 - Term 57464 - 57497 -0.4 42 30 Tu 1 . - CDS 57528 - 59720 2183 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 59844 - 59903 6.0 - Term 59925 - 59974 -0.8 43 31 Tu 1 . - CDS 59997 - 61859 2546 ## COG0143 Methionyl-tRNA synthetase - Prom 61885 - 61944 2.7 + Prom 61929 - 61988 2.8 44 32 Op 1 . + CDS 62146 - 62673 333 ## BAD_1536 hypothetical protein 45 32 Op 2 . + CDS 62657 - 63127 89 ## BAD_1537 hypothetical protein 46 33 Tu 1 . - CDS 63186 - 64241 1291 ## COG0313 Predicted methyltransferases - Prom 64409 - 64468 2.0 - Term 64488 - 64540 17.0 47 34 Tu 1 . - CDS 64570 - 64899 328 ## BDP_2126 mannosidase (EC:3.2.1.78) + Prom 64939 - 64998 3.0 48 35 Op 1 . + CDS 65128 - 65331 65 ## gi|225352693|ref|ZP_03743716.1| hypothetical protein BIFPSEUDO_04321 49 35 Op 2 . + CDS 65452 - 66138 180 ## PROTEIN SUPPORTED gi|154175107|ref|YP_001408238.1| ribosomal protein L22 + Term 66160 - 66219 10.5 + TRNA 66331 - 66406 78.0 # Ala CGC 0 0 50 36 Tu 1 . - CDS 66497 - 67189 964 ## COG0637 Predicted phosphatase/phosphohexomutase - Term 67337 - 67387 15.2 51 37 Op 1 . - CDS 67516 - 67803 341 ## BDP_2176 hypothetical protein 52 37 Op 2 . - CDS 67886 - 68113 189 ## gi|225352698|ref|ZP_03743721.1| hypothetical protein BIFPSEUDO_04327 53 37 Op 3 3/0.167 - CDS 68067 - 68732 538 ## COG0789 Predicted transcriptional regulators 54 37 Op 4 2/0.250 - CDS 68738 - 69769 1382 ## COG2214 DnaJ-class molecular chaperone 55 37 Op 5 29/0.000 - CDS 69837 - 70511 770 ## COG0576 Molecular chaperone GrpE (heat shock protein) 56 37 Op 6 . - CDS 70514 - 72376 2861 ## COG0443 Molecular chaperone - Prom 72551 - 72610 3.0 - Term 72622 - 72656 0.2 57 38 Tu 1 . - CDS 72732 - 73529 1021 ## COG2013 Uncharacterized conserved protein - Prom 73553 - 73612 2.2 - Term 73797 - 73844 14.2 58 39 Op 1 . - CDS 73876 - 74553 898 ## COG1785 Alkaline phosphatase - Prom 74722 - 74781 3.4 59 39 Op 2 . - CDS 74787 - 75713 553 ## COG0730 Predicted permeases - Prom 75750 - 75809 1.9 60 40 Tu 1 . - CDS 75821 - 76654 664 ## COG3764 Sortase (surface protein transpeptidase) - Prom 76713 - 76772 3.6 61 41 Tu 1 . + CDS 76632 - 77018 134 ## + Term 77065 - 77109 3.4 - Term 76813 - 76846 -0.4 62 42 Tu 1 . - CDS 76974 - 78065 1155 ## BAD_1552 collagen adhesin precursor - Prom 78239 - 78298 3.7 63 43 Tu 1 . + CDS 78249 - 78341 72 ## - Term 78099 - 78135 2.4 64 44 Tu 1 . - CDS 78373 - 79893 1780 ## BDP_0277 putative sortase-anchored surface protein - Prom 79955 - 80014 4.2 65 45 Tu 1 . - CDS 80041 - 84387 2799 ## COG5492 Bacterial surface proteins containing Ig-like domains 66 46 Tu 1 . - CDS 84488 - 84781 171 ## gi|225352711|ref|ZP_03743734.1| hypothetical protein BIFPSEUDO_04340 - Prom 84877 - 84936 1.9 - Term 85143 - 85193 0.3 67 47 Tu 1 . - CDS 85292 - 86320 887 ## COG1609 Transcriptional regulators 68 48 Tu 1 . - CDS 86459 - 87256 1092 ## BAD_1557 putative ABC transport system membrane protein 69 49 Tu 1 . + CDS 87561 - 87701 68 ## - Term 87559 - 87609 -0.7 70 50 Tu 1 . - CDS 87683 - 88465 1021 ## COG1011 Predicted hydrolase (HAD superfamily) 71 51 Op 1 . - CDS 88572 - 90635 1813 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 72 51 Op 2 20/0.000 - CDS 90660 - 91559 1293 ## COG3833 ABC-type maltose transport systems, permease component 73 51 Op 3 19/0.000 - CDS 91556 - 92959 1677 ## COG1175 ABC-type sugar transport systems, permease components 74 51 Op 4 . - CDS 93193 - 94437 1970 ## COG2182 Maltose-binding periplasmic proteins/domains - Prom 94578 - 94637 4.1 + Prom 94576 - 94635 4.5 75 52 Tu 1 . + CDS 94679 - 96286 1564 ## COG0366 Glycosidases + Prom 96497 - 96556 3.5 76 53 Tu 1 . + CDS 96644 - 98806 2560 ## COG1640 4-alpha-glucanotransferase + Term 98872 - 98915 11.1 - Term 98913 - 98970 9.7 77 54 Tu 1 . - CDS 99187 - 99789 245 ## COG3340 Peptidase E - Prom 99832 - 99891 4.3 + Prom 99698 - 99757 4.7 78 55 Op 1 . + CDS 99804 - 100262 187 ## 79 55 Op 2 . + CDS 100259 - 100858 638 ## BAD_1562 hypothetical protein - Term 100867 - 100903 9.0 80 56 Op 1 38/0.000 - CDS 100991 - 101833 1106 ## COG0395 ABC-type sugar transport system, permease component 81 56 Op 2 . - CDS 101830 - 102684 1031 ## COG1175 ABC-type sugar transport systems, permease components 82 57 Tu 1 . - CDS 102847 - 102927 74 ## - Prom 102988 - 103047 3.2 + Prom 102838 - 102897 4.6 83 58 Tu 1 2/0.250 + CDS 103027 - 104037 1260 ## COG1609 Transcriptional regulators + Term 104111 - 104163 5.3 + Prom 104210 - 104269 3.8 84 59 Tu 1 . + CDS 104296 - 105351 888 ## COG1609 Transcriptional regulators + Term 105427 - 105478 13.5 - Term 105415 - 105466 17.3 85 60 Op 1 2/0.250 - CDS 105512 - 106891 2037 ## COG1653 ABC-type sugar transport system, periplasmic component 86 60 Op 2 2/0.250 - CDS 106990 - 108750 1904 ## COG0366 Glycosidases - Prom 108797 - 108856 4.3 - Term 108926 - 108983 8.6 87 61 Tu 1 . - CDS 109105 - 110430 2136 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 110573 - 110632 3.6 - Term 110714 - 110767 6.6 88 62 Tu 1 . - CDS 110785 - 111489 804 ## COG0406 Fructose-2,6-bisphosphatase + Prom 111440 - 111499 3.9 89 63 Tu 1 . + CDS 111619 - 111999 384 ## BDP_2209 hypothetical protein + Prom 112125 - 112184 1.9 90 64 Tu 1 . + CDS 112216 - 112995 885 ## COG0778 Nitroreductase + Term 113171 - 113203 4.5 - Term 112837 - 112884 8.2 91 65 Op 1 . - CDS 113001 - 113252 263 ## BDP_2217 hypothetical protein 92 65 Op 2 . - CDS 113264 - 113737 -221 ## - Prom 113886 - 113945 80.4 - 5S_RRNA 113531 - 113642 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 113868 - 114296 95.0 # AE014295 [D:1910860..1913926] # 23S ribosomal RNA # Bifidobacterium longum NCC2705 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Predicted protein(s) >gi|222441567|gb|ABXX02000006.1| GENE 1 212 - 643 67 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352637|ref|ZP_03743660.1| ## NR: gi|225352637|ref|ZP_03743660.1| hypothetical protein BIFPSEUDO_04265 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04265 [Bifidobacterium pseudocatenulatum DSM 20438] # 49 143 1 95 95 183 98.0 3e-45 MASAVRFSRVFDTPMLSSVCKGPRLVSSCPICVEWDCAVGLSLAAARRVVPRLGCLEAGE RWWFENSRAYLYYFFIVNDCQFIVRSFASGREALKDGEVFVRCAFPYKAIVNFLVFESHM LAFCKVFFVEGSILAQDERWRRA >gi|222441567|gb|ABXX02000006.1| GENE 2 582 - 782 60 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352638|ref|ZP_03743661.1| ## NR: gi|225352638|ref|ZP_03743661.1| hypothetical protein BIFPSEUDO_04266 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04266 [Bifidobacterium pseudocatenulatum DSM 20438] # 9 66 1 58 58 91 98.0 2e-17 MQTLESIGVSKTREKRTADAIAWRKTVGKTLKHLTANQHPGVSQPHYPFTAHPPSQPIRE NLPAES >gi|222441567|gb|ABXX02000006.1| GENE 3 930 - 3392 1874 820 aa, chain - ## HITS:1 COG:no KEGG:BAD_1517 NR:ns ## KEGG: BAD_1517 # Name: not_defined # Def: transmembrane protein alanine and leucine rich # Organism: B.adolescentis # Pathway: not_defined # 80 818 97 764 765 482 39.0 1e-134 MVAALATMESMTSEQITNTGSVSGDCGSAQARARTHVQAYVQTQARQNGSAKDGSATNGP ARNDSAKGGPSGQKHGLQRCHAMLRPASRHALLPWLTSIIGVASALCLVIAWFPSTVWNT PIVSSDAPAHYYFIHRLLDEGLGAALHLWPHDSFYPPLFHVCAYLVIKIAALFGVQCSIY AAFNITWIIASGVIFPAGMLVLCRYFLQRWNRGNPISNPISRISQASSTPESSSVSESSN VSNQQVSSAVNRQYNVTFDATFVLQNLIGLFVPVLAVSSVCHPYGLLNAGPLIAFGFATS LLPFLIAATLRLFDAIAAREHIAKWLAIAAVAGVVCLVAHPRIAFTYALILVPFIVLRLP WKLILGAFIAMCVGAVAFVALMLTSFKSDRWANPDSWFHSHQPSKNLWESISFCLTDGLD GFPAILFALLLIAGTAAAFVCASRRAAARASDSFSSAASTVVPVASADVDVDASTSDIAV SAADSPVSVSCPPPASHSNATDAASASSESSRLRRNDRLRDVIALTAAFLLVTLVYVCTV TLVGALPNIISAPWYRDENRIMTMLPLVTLPLLVIGINALAECVSACAASASFAPSASSF STKNSASSVPSLSSASAVSSVKNASFASNWIVLIAVFLVIAILAVSAQIVCPSRSAARDT IIAHSSLNQSDPNEQLTEQKIAVLRKVTKRTGTQATIISDPLNGSMYAETLFNANMLYPI INARTDVPSAPFGKVETAFASGDAQQVLGTVCPLTDAPEYFLTMGDQAQSLQSFPYRAQY DSFHNEELIDTYVDGGTLVKVADYSQYGQGWALYRFGCTD >gi|222441567|gb|ABXX02000006.1| GENE 4 3614 - 4939 1641 441 aa, chain + ## HITS:1 COG:BS_yclI KEGG:ns NR:ns ## COG: BS_yclI COG0577 # Protein_GI_number: 16077442 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 142 401 158 410 486 75 24.0 1e-13 MFVLKNAWAALGRVKWRTALIALLALLVSFSAAVDLAVIRADDTANNETYQSQKATAVIR PNAQTQAKRDGADSSYTDKYLTWEKYSTYATAAQSNNVTFNYTLATSVPVRESKSLQAIA AKNDTSEDKTGGNLTLQAFYTLDAAKINDYGYYKVVKGKHLSYKTQSDGVLISQALADKN NLKVGDKVTVGNPSKASDTYTFTVRGIYEYDSDVPEGNGSDAKYAKDNRENVIYTTYINF AKNGLDTTEATGWAIPNLNIIFSLANPSTYNTFVRLVKKAKLDTKTYEITSPSLTAYKKS IEPLDSAASAARIMLIAVTIVGGIALLALIACAAIGGRRDEIGMAMITGVTKGRLGWQFM LETFMMTVPGWIVGLVAGALLAKPIGTAWAGGQAVSMTSASVWNVIWYGLGACLVLGIVA FARVACFNLNQLFEERSEVKA >gi|222441567|gb|ABXX02000006.1| GENE 5 4936 - 6135 1456 399 aa, chain + ## HITS:1 COG:MA2488 KEGG:ns NR:ns ## COG: MA2488 COG1136 # Protein_GI_number: 20091319 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 236 389 71 216 233 78 36.0 2e-14 MSDNMNDKNENLDETVVDETVVDETAETASNETVDDVATDDIAADASSADSIESIDFAVV YDDDNADIEIAATDGAEISDDVNDGDTAVAADGDAVVSADNADTTEVADDAATAADTADG SDVVANNANQVRETLALRSSDEPTVLESHEMVKADSATSVSSQLDREIKHHRKKDAFFFK ANPTFALDHVTVINRKTGRNILDDLSLSFHAGATHAVLVDAEDREQHQALLATMVGMVRT DRGNVMHKSTNLSDVEPVEMLGHRIGFIPQRFAFRPDLDAESNVLYAMDASNRNFLKPKP VIARELLKRVGFDEVTSGLAVGEVSELNQRRVAIARALSCEAEVIIADEPTAGLDADDAA VVLDLLKKFKRDADRKRAIIVVTTNPEIADAMEHSVELD >gi|222441567|gb|ABXX02000006.1| GENE 6 6254 - 7045 847 263 aa, chain - ## HITS:1 COG:MJ0778 KEGG:ns NR:ns ## COG: MJ0778 COG1418 # Protein_GI_number: 15668959 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Methanococcus jannaschii # 106 206 43 125 169 67 40.0 3e-11 MTTGYIPTLAQVDELHRKIAQSQAAYDLIHGHCVVVADIARRMARRQNALFTRRCTLPDD APEKAGDFGLRLTQDGNGSESFGMLRIPSIPSSDGLTGGTVPPRLIDEHLVVIGGLLHDI GTYFLLKQDGSDGGPLKFDGPNYVRHGLKGYEYLLNEGVDESIAQFARNHTGVGLTKEAV ESQGLPLPPADYVPMNLEQEVVMVADKYNSKSIPPKFLTAEAYARKAARFGESNRREWLR LLERYGVLDVTPLAEQYHMRIVE >gi|222441567|gb|ABXX02000006.1| GENE 7 7168 - 8052 1093 294 aa, chain - ## HITS:1 COG:no KEGG:BAD_1521 NR:ns ## KEGG: BAD_1521 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 294 1 289 289 539 91.0 1e-152 MCRLLGFAAAGSNTSLNGVLGMQAVRDFRNLSEIHNDGWGSALVTVPSESPYLRDGGAPT PETGTAVYKNTIAARHDPIFDELANTPARGGLWHLRLASSNLPLILENQQPFYANGLSFI HNGDISDDQGRNIITNRAFPVDPNIVQSTGGRSDSAIFFAVILQYIGFGFALDEAVAQAV RELRKSYPKSSYNCMIQSQDQFIALCAAGREVTSKRIVEIYDQYGRGDQAHDYRVMRYRT LGESEADQAAGQPKGVVVASSGFDQCAEDGWTRLENNQMIVASNRTGAFRVRSI >gi|222441567|gb|ABXX02000006.1| GENE 8 8254 - 10431 2192 725 aa, chain - ## HITS:1 COG:SPy1414 KEGG:ns NR:ns ## COG: SPy1414 COG3158 # Protein_GI_number: 15675333 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Streptococcus pyogenes M1 GAS # 71 715 10 648 666 563 44.0 1e-160 MANEPNEDEPLFHAATYTQAPKVSHKVLTKEERQVLIKQHEEKQQEAAKLDQVASKGPVG RWWSRLQSGPNRITPAMAIVALGVVYGDIGTSPLYTMQTFLNGQGGLAHADREAVLGVLS LVFWSITLITTVKYVLIAMRIDNKGEGGIFALYSLVRKYGAWLAIPAMLGGAAFLADSVL TPAVSISSAVEGLETLPAFEKLFTENKQLTLMITAAIILMLFSVQSRGTERIGKAFGSVV LVWFSFLAVVGLANLSQYWSVFAALNPVYGVRFLFSSHNAAGLAIMGTVFLSTTGAEALY SDMGHVGRGNIYFTWPFIKIALVLCYFGQGAWMLNHWDDSAYIRTHGLNPFFEMMTPSVR YVAVVLSVVAGVIASQALITGAFTMVSEATHLNWMPHLQVRYPARTRGQLYIPVVNAVLC VSTLLVLALFRDSEHISAAYGLALTITMITTTILLAVYIWHSGRRIGAVVFTVLFLAIQF MFFFASMAKFLHGGWFTMLLTFAILLVMYTWNEGTKLERAQRRHMQPAECLPVLKRLHDD DTIPYFADNIVYLTSDPETKRIDTDIFFSIFADHPKRARAWWAVSVETADEPFTREYSVE NFGTDYMFRVRIRLGFKVSQSIPAYIHQIMNDLSKSGDLPRQESRYPKLDADPNIGPIRY VLIHKALMPESKVSQRGAISLEVKYAIRHFAGSPVKWFGLAPYNPLIEIQPLFLATQRPP RLKRV >gi|222441567|gb|ABXX02000006.1| GENE 9 10664 - 11620 647 318 aa, chain - ## HITS:1 COG:Rv1008 KEGG:ns NR:ns ## COG: Rv1008 COG0084 # Protein_GI_number: 15608148 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Mycobacterium tuberculosis H37Rv # 86 318 47 259 264 152 37.0 8e-37 MSKHHRDRSWAPAPQPLPENAHVIDNHTHVASVVPFSRAMSHEAQEKGQPEVPVYSVDEL LNQAQQVGVEGVIDCGCELPNLMTAIDMAREHPQTVHAAIAIHPNESVLHGHRGVPGPDG LPLKYQPWHDTSFEDAMAEVHRLATAYPNQVVAIGETGMDLFRTGEAAKELQREAFRAHI ALAKELNLPMQIHDRDSHKEVIETLLADGAPERTVFHSYSGDAEMGEIARENGWYLSLSG TSSYKGNDGIRESARIVGLSHVMVETDAPYLSPMPYRGRTNAPYMIPYTLQSLANYLDKP LTEVAQATRKTTREVYGI >gi|222441567|gb|ABXX02000006.1| GENE 10 11742 - 14102 2760 786 aa, chain - ## HITS:1 COG:CAC3436 KEGG:ns NR:ns ## COG: CAC3436 COG3534 # Protein_GI_number: 15896677 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Clostridium acetobutylicum # 1 518 25 542 835 344 37.0 4e-94 MTDKLIATLNKAGVRNISTDLWGIFYEDISYSGDGGLNADLVQNGAFEYNRADSSDWSNY SFWRKIVPAGSFAAFDVLTDNPVAEENPHYASVEVEQAPASLENIGWDGMVFRAGETYDF SAWMRISSNCEASALPVTVALIDDDGNAIAEQDITVDSNDWRKQEVSLTVSGESNAIVVH EGALRLTFTTEGTVDLDFVTLEPRTTYNGLKHFRPDLVKALADLQPRFMRFPGGCITHGL GMDNMYHWDRTIGDVEHRPHNFNLWGYHQSFRIGYYEYLCLCETIGAKPLPVLPAAVSCQ NTSQGPVPIAQKDMPAYIDEVLHLVEFCNGDAATTEWGAKRAAMGHPEPFNLEYLGIGNE DLIDDVFRNRFQQIFDAVKATYPDIVVVGTVGPAPSGPDYEAGWQYAREAGVPIVDEHSY QSSSWWFHNLDHYDTTDREGPKVYLGEYGSWNTQLINGLSEAAFMGRMELNGDAVVMSSY APLFAKNGHHSWNPDLIYFDNERTYLPYSYWVQQMYATTTSDTAWPVAVEGKTTLRRELP PTVGLRLEGAAHADITNFSVDTADGRHVDLEDCHYAGNGPMNTSLNIDSDAYTINATITY YQGRWGLQLVHGDINGKNHNITSFGRAFEIKVVRDGTAYNLDGTEWSMDEVFPGTVWQVR IEVADRGESMKLYIDGELVAQGVEKPEEPRRTVTVARNDAEGVTYVRIVNALDAEAEIDL NQVLEELGVSAESRASATATVLAGTDPYAGEIGKASPTVPVETAIDLTSGAYTAPSWSFT TLTLHD >gi|222441567|gb|ABXX02000006.1| GENE 11 14348 - 14491 115 47 aa, chain - ## HITS:1 COG:no KEGG:BAD_1525 NR:ns ## KEGG: BAD_1525 # Name: not_defined # Def: alpha-galactosidase # Organism: B.adolescentis # Pathway: not_defined # 9 47 29 67 490 74 87.0 2e-12 MATTEDLPKAWRPPMGWNSWDSYGTTVTDREVLANARFMADHLKDAG >gi|222441567|gb|ABXX02000006.1| GENE 12 14735 - 15967 969 410 aa, chain + ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 7 365 7 309 333 120 26.0 4e-27 MANGKPTLRDVAAEAGVSPMTASNALHGKAGVKESTRAKVLAAAKKLDYRINLTASMLKS GRSNIIHIIVNEFDSPFYSKLTQTLSREITSRGLTPFIEQTQYSPDVAEHALTSNPFSGQ LFDGEILHATGLGTNLPLAKLNGGRPLVLLDACEETPTVDAVNFPNEEGERAAMQYLIAQ GCRNIAIVGHTFVPRAELAHAQNAFALRLRGACAALLDAGLPYDETMVFEGGRSDEGITA GHAIAERIMAARRTGCGAGAGAGDRETGTAGTADFNDASGKITGRSIETTDKIPAIAFDG VCCANDFAAFGVIRGLADYGIHVPQDVKVIGFDGVTSGTYATPSLSTIQVDLDQLAKFAV DMIVERIERGEVNDNSSNAGNSNDAGTVLPPSRATIGYQLVERESTTAII >gi|222441567|gb|ABXX02000006.1| GENE 13 16053 - 18491 2132 812 aa, chain - ## HITS:1 COG:SP1898 KEGG:ns NR:ns ## COG: SP1898 COG3345 # Protein_GI_number: 15901725 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 156 621 133 575 720 89 22.0 3e-17 MENGNMTPLVPRQDGRLEWGNGVVSMLFDIAADSPVRLCNVVGRNMVPIDGRLSDDGKPV VEKDPRPIVEVCAANTGSQDNRLTLIATVAGSQLRFVSALASEPEPGSADPFRLEITQFA PYADLEPKGREFEPTASERDAADSAANSASEAVSADSNAGLVVTSVFEAFPNLSAVRTYT RLQSARQLPIEAVSSLNLTVPMRVNCGKVHRSNIFWGDAAWAVENDWRVRPLRDTQVRNR NQKINPGQSSSRFAMSSTSTWSSGEHEPAGILQVEGSVRRARDFSVMWQIEHNGPWEWEV GEDDPGLHVTAFGPEYKDHGWFTNLGEGNDFESVPVSFAIAAGDWQRAVAEMTLQRRALR IAKARELGRVDQFEHTQGLVIYNDYMNTLFGDPRIEKELPLIEGAASVGADVFCIDAGWY DSTDGGWWDMVGEWQASTNRFGDAGLRGLADTIRAHGMGLGLWLEPEVIGVKSPLASMLP DSAFFQRHGVRVCDSGRYLLDFRSPEAREHVTRTVDRLIDDFGAVFFKFDYNTIPGVGTD LNAESVGDGLLEHCRAYVDWLDDLRRRHPDVMIENCGSGAMRADYAQLSRLDLQSTSDQC DPLIYAAIAAGAGMTILPEQQGNWGYAQQEMDDETAVFTLATGVLGRLYLSGFIDRMTEP RLSLVRDAIALHRCVLADQQHMVPFWPSGLPDFDGDWLAVGLRHVETDMGDAYVYGESAW NEQAAEQNDQQPQPEDKPDYIIVWRRGGTPSVNMPLDADQTIEQVFPNPAEPDHAPNAKP WTIERMDPETVRLNAATSKQPSARIFAIRRRD >gi|222441567|gb|ABXX02000006.1| GENE 14 18655 - 19377 834 240 aa, chain - ## HITS:1 COG:no KEGG:BDP_2103 NR:ns ## KEGG: BDP_2103 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 8 240 12 245 245 278 64.0 1e-73 MAVEKPVLTQEQQDAVAALASTNVYAKQSKFKTFRELPPKDKWPYFKQNFLTDVLIIIAV VGLVLAFVISYVTKGPEAELSLEGVDMAEYSEQIDALGADFVKTQGIEDERLVRTDASIA ISENAAQDGSASLTARVSAGQINMIVAETDIFAEVNDRGDITKPAEVMSAADLEQVKDAL VDAKGNPVSDVNDAVGFDLSHSKTWTSMKGLPKEGVILGFSNITESKDMPIQFVEYLQFE >gi|222441567|gb|ABXX02000006.1| GENE 15 19572 - 21359 1974 595 aa, chain - ## HITS:1 COG:lin0155 KEGG:ns NR:ns ## COG: lin0155 COG1132 # Protein_GI_number: 16799232 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Listeria innocua # 4 594 3 591 593 705 60.0 0 MAKRNTYREDEELEEQINLHDILRIGVYVKPYMSRIIRILAVVVMMSCIAVVVPYLTKIM IDSAIPSKNLTLLGELTGLMAVLIVMYEFGLRYRTVEITRVGQLMLKDMRRDIFTHIQTL PFSYFDSRPHGKILIRVVNYVNTLSDTLSSGLINVISDVFTFLITLVVMFVVDWRLALFS LVLFPFLIAWVLVLQHFQRRAYQVLSNKQSNLNAFIHESITGVKTTQTFAQEAAQFKTFQ EQQDDVRTSWMKAVHIQFLMWPGIQTISVMTIAFIYYVGVTGFGAVNVSTGVLIAFVGYA NNFWNPVISIGNFYNQLITCSAYLERIFETLDVQPEIRNAPDATELPQIEGRVDFNDVVF RYEPDGRNILNLVDLHVEPGSTVALVGPTGAGKTTIINLLSRFYDVAEGSVTIDGHDVRS VTLESLRRQMGVMLQDTFIFSGNVRENIRYGKLDATDAEIEAAAKAVHAHEFIMDLPNGY DTVVEERGSTLSAGQRQLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLNHLLKGR TSFIIAHRLSTIENADMICYIDHGQIMEQGNHAELLAKRGAYYRLYDSQYAMIKV >gi|222441567|gb|ABXX02000006.1| GENE 16 21390 - 23252 221 620 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 384 593 294 507 563 89 32 6e-17 MYVDPNRNTEAGNLKWILPYCKPDLPRVAGAIVLFCVNNTMALIIPLLSGLIVDRVIVQG QVDELTRLCIMMIVFTIVRVASRYGYQMWMERFGQNSVFRLVSDEYEKLHELDFTYFNHT RTGDIMSRMTSDTDAIRHALSWVSYQVLDCVVMFIGALAMMFTIDWRLALALACVTPFIF ILTRGLSTHARPLFFAIRNSLAEMNSMVEENIEGNRVVKAFVREPYETEKFDKHNDDYMQ RNMDQAYNSRKYMPWLDGLGFSLQLITLGFGGFLVITGRMTLGNLVAFNSYLWMIDGPVR QSGWLINDWQRFNASCIKIRKLLTAQSRITEKPENTEKPGDSADANHASTAAATAATTNT TRIAGSIDFQHVSFAFPDEPDTLVLEDVDFHVPAGAKLGILGETGAGKSTLVNLISRFYD PTEGHVLIDGVDARDWPLATLRSQVCVVAQDTFLFSDTIGGNISFGAGEQREYDEQYIRR MATIAGADGFIRSMPEGYDTVVGERGVGLSGGQKQRLSLARALADNPSILIMDDTTSAVD METEAEIQRHLRELDEQKTIVTIAHRISSVKDSDLILVLEHGRIVERGTHDELVAAHGRY WEIYYRQLGLQAGRSQGFEA >gi|222441567|gb|ABXX02000006.1| GENE 17 23652 - 24749 1216 365 aa, chain + ## HITS:1 COG:alr0079 KEGG:ns NR:ns ## COG: alr0079 COG0657 # Protein_GI_number: 17227575 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Nostoc sp. PCC 7120 # 76 226 149 292 411 81 33.0 2e-15 MTSTQTIEELSAQYAAKYGITREMIDHAERWTETDGDLEGLSEERVRGILDMRFGAIAVD TPRSELWHTPDTIDVIEDIPYLPDGGYDTEAGQCRGHLLDLYLPHDAVLRCGHTLPVYID IHGGGFTYGYKELNRNFNVHLAETGFAVFSLNYRPAPQTDLRGQLADVQAALRWIKAHLT DYPVNPNAVFLTGDSAGGALTMLTLAIENNAEAAAAFGVDEPSGIGFAGAAPVCGAYSSA SLETMGSELTVGYDPNRRTGLEQMLGVEFFDGIEAADPKFLTAEGLAFNVNLPPLFIVTC GDDFLEADNLALAAALARKGADFELFDPKPRRHETLGHVFVIGMPWLDESVECFERLRRF SYERC >gi|222441567|gb|ABXX02000006.1| GENE 18 25268 - 25456 136 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPLSFSEYRNALQPTANDNALFDRYLTYGGLLYVTQLTLDTIGLGDYQDIRHRNILDWL LE >gi|222441567|gb|ABXX02000006.1| GENE 19 25568 - 26389 702 273 aa, chain + ## HITS:1 COG:CAC2917 KEGG:ns NR:ns ## COG: CAC2917 COG0657 # Protein_GI_number: 15896170 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Clostridium acetobutylicum # 32 272 34 271 272 238 47.0 8e-63 MKHFEYEISGIDGSAAKFVGYCLDNSEEVVPDRVRPSVLVIPGGGYEMTSDREAEPIAMQ FLAAGFNAFVLRYSVKPSVFPVALLEAAGAMTMIREHAAEWHVDPDAIAVIGFSAGGHLA ANLATSTSDDVLVAHGYDPDAVRPNGLMLAYPVITSGPLAHRGSFDSLLGERRNDSQALE SVSIERHIDAKTPPVFAWHTVPDETVPYENTLMLIDACKKAGVSIEAHLFPQGGHGLSLG TAETAWQGVNGIEPSIQIWPQLAVSWMRRTFAR >gi|222441567|gb|ABXX02000006.1| GENE 20 26588 - 27769 1109 393 aa, chain - ## HITS:1 COG:no KEGG:Blon_0046 NR:ns ## KEGG: Blon_0046 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 393 1 393 393 755 94.0 0 MTRDNDWSTMQNSSRHDMQVDSLGAFAARSPLDLLAVAAPGRTRCVNAENPTGGKGAAAT AASALGPSRKGSPCIQTVKAGESVTLMDVDGPGVIRHIWMTVTDRTSSTGPNVLRNLILE FYWDGEETPSVQCPVGDFFCCGHAQACRVNSMPVVVVPNRGFNCYFSMPFEHARIVLRND HNEDVPAFFYQIDYTEYDALPAGTMRFHAQWRRERVTELARDYVVLDGVHGRGAYIGTYL ALTALESRWWGEGEVKMYIDGDDQYPTWCSTGAEDYFGGAWSFADFDEHGRMHEQTFCAP YVGFPFYSQRLASHRESAYWDVNTPVTRGLYRWHIPDPIYFEHDLRVEWQQIGTEEGGNF ERQDDVASVAYWYQLEPHTPFDPIGDRRFRQPR >gi|222441567|gb|ABXX02000006.1| GENE 21 27788 - 28666 1228 292 aa, chain - ## HITS:1 COG:AGl3273 KEGG:ns NR:ns ## COG: AGl3273 COG0395 # Protein_GI_number: 15891757 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 27 292 13 275 276 140 33.0 3e-33 MTQTMTASAARKASKKTQHVRSTGDWITLIVLIAAALLVLFPLLVLTVNAFKTPADYNAT GPLSLPKHFTMDGIISFWTTTKFPLKFWNSLVISLVVAVAAVVLSVLNSFALGIGRVKGN TWIVLAIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIIIIFTIIQSAYGTYLLSSVYGT FPQAILEAAAIDGASRWQILRKVVLPISWPTISVLFVFFFVWTWNEYMIPMAFLMGDDVQ TIPLALATLQGQRTMDATTLASASLLSIVPTIIFFIIFQRKLSQGITAGAVK >gi|222441567|gb|ABXX02000006.1| GENE 22 28735 - 29640 1144 301 aa, chain - ## HITS:1 COG:AGc4553 KEGG:ns NR:ns ## COG: AGc4553 COG1175 # Protein_GI_number: 15889771 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 294 13 302 312 158 32.0 2e-38 MSRLPGNRSAKFVPYLVPGLVGLLVIVVIPFVWNIYLSFTRWRGVGPVKFVGLQNWKRLF ADSTFWISFANSFWIIVAIVVIPTILGLFISSLLTDVIQKKFGGKTASFLRAMFYLPQLL PVAVAAIIMGWIFRPEDGAVNALLVKLGLGSLQHNWLGSPDSALPVLMFILVWIQLGYPI VIFMSGLQRVDPELYEAAGLDGANWWQKFRVVTLPSIIPELLVVILTATIGALKTFAPVY LLTKGGPGTATTVPSYYSYNQFFQVQQVGYGAAISTALTVVIIVFSIVFTMVQKHVEKEL V >gi|222441567|gb|ABXX02000006.1| GENE 23 29837 - 31144 1925 435 aa, chain - ## HITS:1 COG:mlr7000 KEGG:ns NR:ns ## COG: mlr7000 COG1653 # Protein_GI_number: 13475830 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 1 355 1 343 414 67 24.0 7e-11 MKITRGIALAAAAAMSLTTLAACGSDTAQDEETPDSLSFWYYEEDDAGQTQAWRRAAEAF EKETGVKINFERKSFTQIAQNGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYV DQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQRVYYNKDLFAKYGLEIPTTY DEFVDVCQKFVDAGVTPIAADAQEYGVMWLWWQLVSKEADAKFIDNWQLYKGDVDWNSKI LTNSVSTINDWLDKGFISHNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQITTFDW DAAVMPESNFAIGCAGNLLVIPERSHHKDLAAKFIDYVLSDDVQNYLGNAGGIPVAGDAS KINDEKSKAMIEEYASYANDGKLSYYPDYAASNLTDAVPAEFQELVNGTKKPADVLKGIH EKYDVGVEDMGVKTN >gi|222441567|gb|ABXX02000006.1| GENE 24 31392 - 32414 864 340 aa, chain - ## HITS:1 COG:BH2923 KEGG:ns NR:ns ## COG: BH2923 COG1609 # Protein_GI_number: 15615486 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 313 5 318 344 96 27.0 7e-20 MTGIKDVAREAGVSVSTVSYVLSGKRSISAKTTDKVMAAVERLGYTPDASARKMRGMRNH IFALSAPIRGDINQAKYNAYFLQTAWQAKNRGYDVLLLTGEDAVADIRRVTQSNLVDGVV LLDIEEHDERTAQAGSYSKPCVAIGYPAEHEGCACVDIDFATAGRMAVDCLYSKGHRSAM FLRDNETDYDRGSGYVLLFRKALLERAEELGMTIHESSKHRDDRFDAAEFVRELRSLDER PTAIVNQANANVLKLVLQQLQASGLRVPDDISVLSCGTYFEGELMPQPITEMPVMPQELC SKAVDLLVDAIDEHRDIKGLVELSAPVMHSRGSVTKVGDV >gi|222441567|gb|ABXX02000006.1| GENE 25 32915 - 35167 2027 750 aa, chain - ## HITS:1 COG:alr3757 KEGG:ns NR:ns ## COG: alr3757 COG1215 # Protein_GI_number: 17231249 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 129 678 133 660 693 74 22.0 8e-13 MVAKIGDFDGDDRRHQWGAETSTQPLAIMHAKPSPTRVVRGYVAIICTVVSWLIYMITMI LSLFVNNPSLTLRFVVEGVLYMTIVTTLIFSALVYLTTRQGALYRFIRHERVPRAMLDDH FAHNYDKGITVLIPSYVEQPKVVEKTIWSAALQEFPDLAVVLLIDDPPHPNNDEARAILK ASRELMPKVLAELAAPAERFTKARDETVAALADQMDARRSVVARCAEDYRAAAQWLEHKA DTWLVEDHTDDFFCDQVLRGLARDLRLTEQALNESITLQQHVDANRILQLYERLVRIFTA KGWSFERKLYASTSREGNKAMNLNSFIGLMGHSLKRVETSDGVILRDVREGESPDFVMRN SEYVLTLDADSMLLRDYCLRLVYQMEQPGNERVAVIQTPYSSYRGAPTRIERIAAATTDI QHMLHQGMTYYDATFWVGANAVIRKAALDDICVVSTEGTRTVKTYIQDRTVIEDTESSID LGYFGWHLVNYPERLSYSATPPDFGSLVVQRRRWANGGLLIIGKFFRIVHARHQQGNDVK LGEWALRVNYMASIAWSSFGLMFLLAYPFDQRLLSPWVVLASLPYFATMSSDLKRNGYKR SDIFRIYGFNIVLLTVNLSGTLKSIQQGMTNTKIPFARTPKVNNRTASPALYVTMPWVII IYSCMVFYADTLSHNWGNAVFAGFNAIVTFWALTAYIGIWHSVQDMVVGLVRWFFVPIKE PQQEAARKKASWRDALYFGDRQMIYESRPL >gi|222441567|gb|ABXX02000006.1| GENE 26 35414 - 36724 1190 436 aa, chain + ## HITS:1 COG:no KEGG:AAur_3218 NR:ns ## KEGG: AAur_3218 # Name: not_defined # Def: putative glycosyl hydrolase family protein # Organism: A.aurescens # Pathway: Amino sugar and nucleotide sugar metabolism [PATH:aau00520] # 1 436 1 442 519 283 38.0 9e-75 MKPLFPGRRFSFLRLFIAILCIALVAAGTWSWITFTRTAAKKLPEPWFGGYVDVTATPSY EFESKVGNVYRNVILGFVTAGDGCQPSWGGYYTLDEAASTLDLDSRIAQTYKTDRTVTVS FGGQNGTELASACSDVDSLADAYQQVIDRYHITSLDFDIENSNLDGYSETATRRAQAVAK LIANEKAKNKGKDDTSHDLIISLTLPADAKGLTTQGMQTVNAFLDAGVTLSTVNLMTMDF NVASTSITQSMLIKSSLNAAHAQYKTLLYSRGKLFSDHQIWELLGATVLIGQNDTKNEYF TLDNAREINTFALETSLGHLSMWSLNRDQQCGENYTNTNTLKTFCSGMKQTDGEFATTLG SGFRGTPGTLVDFDNASWNSSQQAYPTWEPDVLYKQGDKVIWNGNIYESLGNNENEQPDS AEEGTNAPWRIIGPVL >gi|222441567|gb|ABXX02000006.1| GENE 27 36836 - 39292 2388 818 aa, chain + ## HITS:1 COG:CC0896 KEGG:ns NR:ns ## COG: CC0896 COG5001 # Protein_GI_number: 16125149 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Caulobacter vibrioides # 419 795 268 640 677 85 23.0 6e-16 MTSKQSKHQAATGSQPKDGIRKPARLTILAIIYALCIAAAIAFHAQEGVQQLMEDPARIC IWSLCFLPCLIYHKKRSSYRVAAEHTVLPPLTVILLVTGYFPDVAMFLIIVTIITSIITA RSLKIGILRAGTTLAPIPLIKILFANTSHVLSIIISQNSVNAAINPYQFQHWLLPLLIMT VAVPIIRLICDIVTFFFVQIPIRKAMREYSLSHILAMALADLMAIVWIPEILEFANIGSD TATVLSVFMLALIAYSLLLMTVDTMSRLTRSRSALKCIANVSDALPLPNQVPEETVVRRI NRGLTRMRCFISNANNLNKRGYSYRYSAPISTGSRQYYLAMERSIWNRPFMSTDETILLT CGEVLTESLRVNKEVTLLRTESETDTLTGALTYRAFIGHLKSLQTENVHNLVAVVYFGVE HLRTVNEHYGRKIGNAVLRSVGMRLSQLLPGNATLSRVNGAEFAMIVTDVTSTSDVEELA TRMRNLAVMPVYTEEGEVSVDVSSSISFSNATDGFSVLLADASAHIYESESSNLPVVDGM TSTLAAQNGSGDYFNASDVLRHAIEDNTISVLYQPIFDVNTKRITSLDTIVRVHDAKGRT LAPYFVTAEAHRLNMSVQLTLDVLETCVKDMTAFRKVAPELDIVDICMNGSELGASIFHE RLEQLTHEQPQLRFGLQLGSHAIHVVHDEVDDEVAALAALPNVELGLTNAGTTYSEVAAF AHLPLDFARFDKTVVRDFRTPRAKQIMQRTLEISRDNDAFHVVFDGVESLDQVEFIRSIG GTLAEGTLLSNAMSANEFLMRLETMGTSLPEAAPRQAE >gi|222441567|gb|ABXX02000006.1| GENE 28 39425 - 40441 1149 338 aa, chain + ## HITS:1 COG:BS_lacR KEGG:ns NR:ns ## COG: BS_lacR COG1609 # Protein_GI_number: 16080470 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 333 1 328 330 183 34.0 5e-46 MATIREIAKRVGFSQATVSRVLKDDPTFSVKDSTREKILNASLEMGYKNVPQYQRITIPQ DVAILDNVVPDKGLQDAYFDELREVLVKHAEEQRMNVTMHEDVDSLIADADKYAGFISIG PSPLDHKTLHRLHKKLPHGVFIDINPAPTLFDSVQPDLEQTILDAIDALMGSGCSRIGFI GGLGNIMGKHEYPEDIRTFAFRNWALRLGLDAQGLVYADGPFTVENGRLQGRQLVQDHAD DLPDAVIIAADPLAAGVLQAFATENVMVPRDIKVISINNQEIAKYTSPALSSYDISQDEL AKAAVLMLAEALTADRKISQHMRISTSLVARDSFTPQD >gi|222441567|gb|ABXX02000006.1| GENE 29 40535 - 41890 1208 451 aa, chain - ## HITS:1 COG:Rv3332 KEGG:ns NR:ns ## COG: Rv3332 COG1820 # Protein_GI_number: 15610468 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Mycobacterium tuberculosis H37Rv # 91 434 26 366 383 191 40.0 2e-48 MAGSESEGMKMEQSRERFANEVDIALAQSARPFAIHNARKVDARGVAEHYWIVSDGSAII ATGNRDDDFAAACASVGLDADAAVGADADSGSVSSAGFGNSMTGSTGSVTDAAGCMMTPG YVDIHAHGSWGSSFDDGVQGIRTARAGHMMHGTTRQVLSLITNPLDVMCANLETVHGMMS ARPDILGAHLEGPFLALSRKGAHDPECLKDPLPEYVDRLLQAAGGCLRQITIAPELPHGI DAIRRFVAAGVVPAVGHCDADYATAHKGFDAGAGIMTHMFNAMNGLHHREPGPIPAAVED PRVTIELINDGFHVQNPMVRLGFGFAPHRTAFVTDAMAATDCPDGHYLLGALDVDVIDGH ARLVSNGAIAGSTLTLEKAVQRAVLELGFTPADAVEAATLTPAKAFGFDRANPVTRQPLG LLAPGYAADVLLLDPATWSVTHVWCDARPLR >gi|222441567|gb|ABXX02000006.1| GENE 30 41744 - 42082 158 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRNTSRIDFARIVNRKRAGRLRQRNVHLIRKTLPRLFHLHTFRLTSSHIPQLASNSSSQ WKNHPADKPISVQKPPAGGEILPLTATSESQFLQSLEESGRRNTLVLSKNFQ >gi|222441567|gb|ABXX02000006.1| GENE 31 42181 - 42993 1010 270 aa, chain - ## HITS:1 COG:Cgl2592 KEGG:ns NR:ns ## COG: Cgl2592 COG0363 # Protein_GI_number: 19553842 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Corynebacterium glutamicum # 3 258 2 245 253 193 44.0 3e-49 MTEVIIVKNEREAGDIYGRSVADLIKTKPNAVLGLATGSSPLAAYQSLARIVHGEHIDVS QVRGFALDEYLGLPLDHPQSYHSTIHRTVVEPLGLNPDLVHVPGDVLDGAPLSDGERIEA AGPAYDKAIEEVGGIDVQILGIGTDGHVGFNEPGSSLASGTRVKTLVEQTRIDNARFFDD DIDKVPTHCITQGIGTILKARHLVLLAFGSGKAEAVAETVEGGVSAFCPASALQMHPHAT IIVDEEAASRLRHKDYYRYAYAHKPAWQHI >gi|222441567|gb|ABXX02000006.1| GENE 32 43064 - 45106 1361 680 aa, chain - ## HITS:1 COG:no KEGG:Blon_0459 NR:ns ## KEGG: Blon_0459 # Name: not_defined # Def: glycoside hydrolase, family 20 # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 676 1 669 673 783 58.0 0 MASENTRKWAIIPEPNSMTVGEGTVLLPYAGRVNESIAIGDGDFLLAHQLVADIRSATGT DWDIATGDMWSGFIRLRIADSWDFDSQDGGTAGAYTLTINTDGITITGCDFEGVRNGVQT LRQLIRQNGGVLPELQIADAPACQIRGYYLDATRGRVPTLAWLKQWADKLCLYKYNQLQL YIEHTFAFDGMSETWRGSSPLTPADTLEFDQYCANLGIELVPSVSTFGHQYVAMRTQELR ELGEFPEDADRPFSFIERMRHHTLNVADDRAFAFSAQLVDSYLQLFRSKRFNICADETFD LGKGKSKQEAQRVGVAALYATYVGKLCEHLSKQGREPMFWGDIAVEMPEILETLPNNVTL LNWQYEPEATDEKIQLMAQAGAKQIVCPAVWGWNALLPRIDDAWNNISRIARYGIDCGAE GMLVTDWGDFGHINDPRMAVPGMIFGAHYAWNPAEDSAGKTDGNTAENSAGDSAENDLLE RISRVEYGDCSARFVTLLRNASAQAVFTWRELVEYLELDDGTGNCNTDVAQTIPCLTDRL ANPGNALTLREARDRMMRNMATTIERIPQANRKLQQCMVEIAPIMAHIGKPGIAAAVRIA MEGQLLLNRVGFALAEAHDVRDAHDAGDWRPSDYRALARELECWCEAYAKEWNVTSQPSE LHRIQETVWKAADELRRISR >gi|222441567|gb|ABXX02000006.1| GENE 33 45234 - 46166 338 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 16 305 7 315 323 134 27 2e-30 MNARLHHNGRSQGCVGIDIGGTKIEGVLLDATDRVIDVCRMPSHSGESNVVTDIVRVARI LSNEALPIGIGIPGQVNCATGQVSNVVNLDIETLELGERVSAIMHAPVHVENDVNAAAVG AAEFVEQVDGNATVVFLNFGTGLAAGLVRGGQAEHGYSGSIGEIGHLPIDPNGFECPCGQ RGCLETVASGGAVAKLWPSANPPMPDLIRKARQGDGHANDVLAMVAHAMGDTIQIVAQAY DPQRIIIGGGMAKTGDALIEVIQAELSRRAEGCRFLTTLDIASNIRIAAMDQPIGAIGAA LAAKRAQPQS >gi|222441567|gb|ABXX02000006.1| GENE 34 46272 - 47231 1134 319 aa, chain - ## HITS:1 COG:BS_araQ KEGG:ns NR:ns ## COG: BS_araQ COG0395 # Protein_GI_number: 16079925 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 45 319 15 281 281 137 30.0 4e-32 MSNAVAARKDERARRKAERMMEKQREAAEHDLPRSMRPSPITKTITVIVLVVALIYFLFP IYWAIIASTKTPSQLTSSNGLWFAVGLDQIPDAIATNYSKLMGWTRGQFWRWVLNSLIYS GVSALIGTIISVMAGYATAKFNFRGKAIAIGVVMGCMLMPVALLTIPQYSIFHALHLTNT MLAIIIPCCVSPFGFFLGRVYAQTSVPNELLEAARIDGAGEARIFFTIVLRLLAPAMVTI FLFLFVGTWNNFLLPLMMVSSDTLKPVTLGLYGMVSLATFNDRGSLMMGALLGVLPVIVL FLGLQRYWQAGLAAGAVKG >gi|222441567|gb|ABXX02000006.1| GENE 35 47228 - 48172 1086 314 aa, chain - ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 17 258 2 241 293 120 31.0 3e-27 MTATTQAAKPKRTDAQRRENRTGWAFMAPFGILFAIVFIIPIFYAIYSSFFRQVTEGGGA YGGGELVNKFVGFQNFEYVLTSGNFWSGVGRVLIYTLIQVPLMIIIALALAMVIDSFVVK HITGFRLGYFLPYAIPGVVASIIWVYLYNGQISPIVKGLAAIGINVDFFSKNVVLASMAN ITTWTFTGYNMLIFLAALQAIPHELYEAARIDGASGWQISMRIKLPNVRSAALLSMLLSI VGTIQLFNEPQIMQTADPGISKTYTPMMMAMNTSQGTLTPGGDGPASAVAIVMALIAGVL AMIYALVERKANEQ >gi|222441567|gb|ABXX02000006.1| GENE 36 48434 - 49741 1733 435 aa, chain - ## HITS:1 COG:SMb21595 KEGG:ns NR:ns ## COG: SMb21595 COG1653 # Protein_GI_number: 16264783 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 59 337 45 323 410 73 26.0 6e-13 MRSHTQRLMVCAASFAALCMGLAGCGSNTASTGGDSGEVVNLTYMHRLPDSEGMTLVKDI VAKWNKDHPNIQVKATKFDGAAQDMIKKLETDVKAGNAPDLAQVGYAEVPEVFTKGLLED VTEEAAKYKSDFAEGPYSMMQVDGKTYGLPQDTGPLVYFYNQKAFDELGIKVPKTKDELI EAAKTAAASGKYIMDYEADEAGNIFAGLANASDPWYTVKNDAWVVNTNGSGSQAFAETFQ ELIDNKATLTNPRWVPSFDASLQDGTLIGNIGAAWEAPLFKDSAGDTGKGDWRVTQIGDW FGNGTSTGPDGGSGVAVLKGCEHKAEAMEFLDWFNTQVEDLTSQGLIVAASTETAKTPES WNEFYGGQDVMKEFATANDNMVAFNYMPGYSAVSAAMQEAADKAADGSGKVADVFPVAQQ TSIDTLKNYGLSVAK >gi|222441567|gb|ABXX02000006.1| GENE 37 50036 - 51160 899 374 aa, chain + ## HITS:1 COG:BH2758 KEGG:ns NR:ns ## COG: BH2758 COG1940 # Protein_GI_number: 15615321 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus halodurans # 31 268 28 271 386 115 32.0 2e-25 MSGTQAKASPSDIRISNITAAFEQLFPATQMSRANIGKLIGLSRFTTSEVTGEMVDNRIL RELGPDNREGRGKRSQVLAIDTDFWRIVSVDLSNPMLVKGALADLSGRIVDRTELPVDHG CSVNDVIDLCRQLISSTPLPTLGIGIAVTGIVEPNGVVRKSVHLGWSELPLKTEVENATG VPVIVGNDTNAALVAERFFGDCSPNSMLISIGRGVGAALCLNDVIIEGSSFTAGEIAHVV VDPNGPICECGKQGCLESFVSGDRLQQRISQDPAARTHILTEAGALLGRVMAIPAGLLDL RDISVYGAPEIVNTQFIDAMENEISRTVTTDYQEAPQIHRCRQGEDLTLRGQATIVIRTL VPTIHERGSLIGEA >gi|222441567|gb|ABXX02000006.1| GENE 38 51525 - 53084 2137 519 aa, chain - ## HITS:1 COG:CAC3451 KEGG:ns NR:ns ## COG: CAC3451 COG2211 # Protein_GI_number: 15896692 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Clostridium acetobutylicum # 16 483 8 454 458 116 24.0 9e-26 MSNTTTTANGTARCGKLGQRVAYACGNLGQSAFYNALSTYFVVYVTSSLFAGVDKGVATK LIGIITGLVVVIRIAEIFIDPLLGNIIDNTTTKWGRFRPWQFLAGAISSVLIVLVYTGLF GLVNVNTTWFIVLFVITFVVLDVFYSLRDISYWGMIPALSSDSHERSTYTALGSFTGSIG YNGITVVVIPIVTYFSWVFTGKYVESQSGWTCFGIIVGLLGLLTAWTVAFGTKENESALR SKAQKNGNPIEAFKAIFQNDQLLWVALSYLLYAIANVATTGVLIFLFKFILDNQAAYSLT GVIALVAGLVMAPLYPILNKRIPRRYLYIGGMISMIAGYVMLGIFSDNIIMVFVALVLFY VPGTLIQMTAILSLTDSIEYGQLKNGKRNEAVTLSVRPMLDKIGGAMSNGIVGIIAVAAG MTGNATAADMTASNIHIFKICAFYIPLVLIILSLIVFLFKVKITEKMHDEIVKELEVKLA NGEIEADDAQTVEAVEAVAVAETAGTAGTATPAGQPESR >gi|222441567|gb|ABXX02000006.1| GENE 39 53445 - 56507 3511 1020 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 6 1020 3 1014 1014 805 42.0 0 MADKITTASAAWLTDPTVFAVNRTPAHSNHVTFSHIPAIGEPSDLKQSLDGEWRVEMVQA SDIDLEEEPFAAEDFDDSAFGRIDVPSHLQNAGYMNHKYVNIQYPWDGHENPQEPNVPET NHVALYRRTFTVAERLDTARQNGGTVSITFHGMATAIYVWVNGVFVGYGEDGYTPNEFDI TEALHDGENVVAVACYEYASASWLEDQDYWRLHGLFRSVELAAQPHVHIEDMKVEADWNP ETATGSLDALLAVRNAKNAATVSATLKDLSGNVVWETALAASDETGIVSGSLDVKPWSAE SPALYELQVVVIGHDGAIVETATQRVGFRRFRIEDGIMKLNGKRVVFKGADRHEFDAKRG RAITRQDMIDDITFCKRHNINAIRTSHYPNQEYWYDLCDEYGIYLIDETNLETHGSWCLP GDVVTEDSAVPGSKPEWEGACVDRVNSMMKRDYNHASVVIWSLGNESYAGDVFRAMSVHV HELDPNRPVHYEGVTHNRKYDDVTDIESRMYAHADEIEEYLKSDPKKPYISCEYMHAMGN SVGNMDEYTALERYPQYQGGFIWDFIDQAILVRLPDGDERLCYGGDFGDRPSDYEFSGDG LLFADRTPSPKAQDVKQLYANVRIVPGETGVEIANDNLFVSTADYVFVTRVLADGEPVWQ AEQRFDVPAGETKHFDIEWPLEAYRGQANELTLEVSQRLAAAEEWASKGYELSFGQTVVA GSKPVAASETKPVDGIVTVGRWNAGVQGSGREILLSRTQGGIVSYTLDGREFVLRKPTLT TFRALTDNDRGAGHGYDRAQWVGAGRYAKCVNNTIEQVNDDTLKAVYEYELATPQRTHVT ITYVADTTGKLHLSVDYPGETQEAPTIPAFGLEWTLPVEYSNLRFYGPGPDETYADRKHA KLGIWNTNAYDDHAPYLMPQETGNHEDVRWAEITDDAGHGMRVSRHGESAFALSLQPYSA FMLEEAQHQDELPAPKHMFLRVLAAQMGVGGDDSWMSPVHPQYHIPADKPLHLDVDIELI >gi|222441567|gb|ABXX02000006.1| GENE 40 56643 - 57341 695 232 aa, chain - ## HITS:1 COG:SP0716 KEGG:ns NR:ns ## COG: SP0716 COG0819 # Protein_GI_number: 15900613 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Streptococcus pneumoniae TIGR4 # 14 229 5 220 222 90 28.0 2e-18 MNHVPEAPQSASGDYAWLGAEPGSVADQLYMSAADEWNQAINSRFVNELLDDTLPESILK SYLIQDFKFFNQGIMAHAIELAPRQETKDMLAKQSQWFADNEATYFTGFLKEYGITDEEY NNSEQTPANREYCEYLTKLVQGTWEELITALCCMEWIYLAWAKRTIDAGVVQQIPAHKGW VDLHEGDYFRAWTGRLIALVNEYASVDGSEADVFRTIVHLERRFFEDSYPQR >gi|222441567|gb|ABXX02000006.1| GENE 41 57333 - 57632 140 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIHGHKTPSVNAANANATHISSLRSAVARCDGAIIAAVPNVPNAPPKRKKQNASMTAMTA LNLGESLREFVEAAIVGHEAVELFFDVGNLRIHVARQSA >gi|222441567|gb|ABXX02000006.1| GENE 42 57528 - 59720 2183 730 aa, chain - ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 186 622 139 528 1014 64 21.0 8e-10 MRCCREALMLDVKRVLKAAPTKMRSQEPLQQLWTPWGEQIAGEWLSSNDAHKAFCPAKDG ERKLENGRTPILNEHPRPTMVRGNHTMLNGFWDYAIVSIPESGNGSKWRKSAAVLTRDEA VQAVKEAAIPETFDGKILVPFSPESALSGVHQTIYPDNMIWYRTVVHPVTLGGGEAVRQI GDANRLMLHFEAVDYVCACFINGQFAGMHVGGYLPFDVDISAFVDPDDAFEIALCVYDPN DSGTQMRGKQKIEREGIWYTAQSGIWQSVWMEIVPEAYVQTLTLKGAADGRLFIRAEIGG DKPNAKLHIVVADPADGTIVADELLPAGMRKVRTEIATRAEHLWSPNDPYLYDVTATLEF GAAKSQGKQEKLQQESQEIQEKPAKSQEKQDIVRSYCAFRTVEIKPDLKGIARFHLNGKP VFLKGVLDQGYWPDGLLTAPSDEALVHDIIAMKESGFTMLRKHIKIESARWYYHCDRLGM LVWQDAVSGGGEYNAWVTNRKPTLMRATWNKYRDDTAKHFAALGADDSTYRRDWSRTCDA MVHMLAGHPSIVTWVLFNEGWGQFDACDAAERIHALDPTRPIDATSGWYDQRCGDFHSVH NYFRPLEIYPDKGPLRGYVAEYEKRHKRRRRAAHYAVLPVAQHGVRAFVISEFGGLAQLV ADHAAVSRAYGYGEYDSIEDWRTAVRSVLDSAESLESRGLAGYVYTQVSDVEEELNGLMT YDRRLNKFAQ >gi|222441567|gb|ABXX02000006.1| GENE 43 59997 - 61859 2546 620 aa, chain - ## HITS:1 COG:Cgl0868 KEGG:ns NR:ns ## COG: Cgl0868 COG0143 # Protein_GI_number: 19552118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 3 590 4 600 610 756 63.0 0 MSHILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEA DKEGVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEQVVQELFKQCLANGYIYKG TQKVAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETP RFEETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVP VAGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRAWWNDPETPGYYFMGKDNIT FHSQIWPSEMLGYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKD ILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLMNKNFGE IPALDESEMTDEDRALLSETKAAFDTVGSLIENHRQKNALSEAMRVVGDINKYISATEPW KIKDNPARLGTVLHVAAQAVSDANHLLAPFLPHSAQKVWEALGGTGTFSPLPRLEEVEDL DKPGFMYPIITGDYKLGETVHPWASEPIVAGTAVPKPHPIFAKIPPEAVEEELARFDSEL KARREAEAARLAAEKAKLEG >gi|222441567|gb|ABXX02000006.1| GENE 44 62146 - 62673 333 175 aa, chain + ## HITS:1 COG:no KEGG:BAD_1536 NR:ns ## KEGG: BAD_1536 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 167 67 233 234 256 68.0 4e-67 MCLNLLASSGALCKLDSANAYSCHDSDTLYGRSCIIATLLPSRSVACSRTAAWVWLGGTF PESIDIIAKAHYRALRYGRKINVFNRLAPNEHTIKVGPIIVTTPVRTACDLALNCTPESE SLVSEIICMLMQEFHFRSNDCMQIMQETKHIRNAPQARNYILAIDGRSDEYERSA >gi|222441567|gb|ABXX02000006.1| GENE 45 62657 - 63127 89 156 aa, chain + ## HITS:1 COG:no KEGG:BAD_1537 NR:ns ## KEGG: BAD_1537 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 35 152 36 154 166 121 65.0 8e-27 MSAAHSRHKARRATHADRIGADRANGFRRLLGIQEKRRPRTHRETHRDARNLAHRAQRTR REPPPYQPKPRPKPLVDPPSPPIPLTPLVACSPDTPQDVLWHIAEYAPQLRKWLVANPSA TPAMLDYLAQVGGPDVARALQILLESLESCGSQACS >gi|222441567|gb|ABXX02000006.1| GENE 46 63186 - 64241 1291 351 aa, chain - ## HITS:1 COG:Cgl0866 KEGG:ns NR:ns ## COG: Cgl0866 COG0313 # Protein_GI_number: 19552116 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Corynebacterium glutamicum # 59 351 8 281 282 202 40.0 5e-52 MNETLDLKLNELSANTAEVTGTAGMVNTAEMAESPTAAEQSGTEQSGTGLDALVCGTDVP QGTVVMAATPIGNTADASARLIALLERADIVAAEDTRRLYALANRLGVHVNGRVVAYHDH NERDKSDGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDA LCLSGLPTDRFCYEGFLPRKHSERVQYLRTLRSERRTIVFYETLHRIDDSMADLLDVFGP NRKMALCRELTKDFEQIRRGTIAQIRQSVIDEPPRGEMVLVVAGASEEEADAAAPASLSV EDLAVLSIDRAQEDNLRIKDAISQVVAEHPLADGSLANRKQVYNAVLAMKQ >gi|222441567|gb|ABXX02000006.1| GENE 47 64570 - 64899 328 109 aa, chain - ## HITS:1 COG:no KEGG:BDP_2126 NR:ns ## KEGG: BDP_2126 # Name: not_defined # Def: mannosidase (EC:3.2.1.78) # Organism: B.dentium # Pathway: not_defined # 6 96 10 106 407 89 50.0 3e-17 MAENLAQSVDGNLNRQSRALLEALHAAAGKFSMFGHQNETSKVITPDTDSDVHAVTGAYP AVWGNDSGAAGTGAYGTPLPESPYARDFNAFARNSFIRMADSLPRMYTR >gi|222441567|gb|ABXX02000006.1| GENE 48 65128 - 65331 65 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352693|ref|ZP_03743716.1| ## NR: gi|225352693|ref|ZP_03743716.1| hypothetical protein BIFPSEUDO_04321 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04321 [Bifidobacterium pseudocatenulatum DSM 20438] # 21 67 1 47 47 82 100.0 1e-14 MRSPPPQKKTKIVRSQRQITMSDTRYTGYIAYSKAKQPNAKHHQTKITHRSWHFASVCAD LPTVGHY >gi|222441567|gb|ABXX02000006.1| GENE 49 65452 - 66138 180 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175107|ref|YP_001408238.1| ribosomal protein L22 [Campylobacter curvus 525.92] # 24 219 9 198 199 73 29 3e-12 MGIINFFINLLKDPRTAIASWISMGVAPTLGFIFLIVFVETGVVFFPFLPGDSLLFAAGF FAAPDAQTGVSALPLFALLPVVWCAPIIGDQCNYWIGHFFGRRIIESGRVKAMTPERLAK TEGMIEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRFTPFSVLGGLCWSTLFTLLGY FFGGIPAVQKHFELVIIAILVLSLIPTFVGLLKAKFDKKKADTATAEA >gi|222441567|gb|ABXX02000006.1| GENE 50 66497 - 67189 964 230 aa, chain - ## HITS:1 COG:Cgl1470 KEGG:ns NR:ns ## COG: Cgl1470 COG0637 # Protein_GI_number: 19552720 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Corynebacterium glutamicum # 7 190 1 185 231 102 36.0 6e-22 MTETNLMIKAVFWDMDGTLIDSEPYWHEGEMKIAAAHGGYWDEELAWQGSGTPVPDVARR MVEHGCQLSIEEIGQGMIDYVAQKEFERIPWIEGVEDVLVALRDAGVPSTLVTTSPRHLA ENLVVQAPAGAFAGYVCGDDDVEKKPSPAPYLEAGRRLGIAPEDMKYCIAIEDSMSGLRS AVASGATTIGQTGFMQIDNSNGPQFASIKGYEGIDAASLDAFVRQRVSQV >gi|222441567|gb|ABXX02000006.1| GENE 51 67516 - 67803 341 95 aa, chain - ## HITS:1 COG:no KEGG:BDP_2176 NR:ns ## KEGG: BDP_2176 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 20 92 1 73 78 109 83.0 3e-23 MPRVAFTAKTRKYLGSLDAVESVTQYRICYSKEFRDDCMRRYAEGGSPAAIFREAGLDPK IIGYKRVERCIARWKAENAEKAAETAVENSENQGE >gi|222441567|gb|ABXX02000006.1| GENE 52 67886 - 68113 189 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352698|ref|ZP_03743721.1| ## NR: gi|225352698|ref|ZP_03743721.1| hypothetical protein BIFPSEUDO_04327 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04327 [Bifidobacterium pseudocatenulatum DSM 20438] # 21 75 1 55 55 93 98.0 5e-18 MLSRFLGLSCFGGLTDFQKTLKKKFKNRHIWQQMCLFCYIVLPNALLPATMSSLWEIMLS IRVLTVILPVVKVLR >gi|222441567|gb|ABXX02000006.1| GENE 53 68067 - 68732 538 221 aa, chain - ## HITS:1 COG:Cgl2737 KEGG:ns NR:ns ## COG: Cgl2737 COG0789 # Protein_GI_number: 19553987 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 43 163 18 141 146 90 45.0 2e-18 MARASRTSQARAARQAKMLYDMCAMAIVAGRADLDGADEVGFDIELPMFTVGRAGELANV HPQTLRQYDRLGLVVPQRTDGGARRYSLRDISRLAKAQQLSQEEGINLAGIARILSLEEE NRELRRQVERLRRPAGSSVFAADADGDIVEIERSRRARMWRRQIQVDARQLPSRESVEAA RVAADAYDTRGGGVAGENEGIERGKPVAQPISRSIVLWGID >gi|222441567|gb|ABXX02000006.1| GENE 54 68738 - 69769 1382 343 aa, chain - ## HITS:1 COG:slr0093 KEGG:ns NR:ns ## COG: slr0093 COG2214 # Protein_GI_number: 16331768 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Synechocystis # 9 318 7 302 332 154 36.0 3e-37 MAENEWLSKDFYKVLGVSKDATDDEITKAYRKLARKYHPDLNKTKEAEEKFKDISEAYDV LSNKDNRQKYDAIRQFGMGGARFAGGSGAGGFDAGAFSDIFGSMFGAGAGAGAYGTGGNG SRIRFQTGGGNPNINDIFSMFGGGAGGPAGAGNPYGGSYEQAAQPEDGEDRNSKINLTFR QSVKGATVSLSADGKKFKTHVPAGVRDGQKIRIPGKGKPGRNGGKNGDLYLQINVAEDPK FSLRKRDIIMDLPITVGQAVAGAKVTAQDIDGNEVTFKVPAGSSSGTEVRISGRGVANRQ GDGDLIGRVQIRIPDKPSLKVKHAAKEFDKECGDFADELAKER >gi|222441567|gb|ABXX02000006.1| GENE 55 69837 - 70511 770 224 aa, chain - ## HITS:1 COG:ML2495 KEGG:ns NR:ns ## COG: ML2495 COG0576 # Protein_GI_number: 15828349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Mycobacterium leprae # 89 219 56 188 229 81 38.0 1e-15 MSDFNKDEYLNDLPDMDNLSGQAAPAAGASQESQNNGDSAASATSDSADSAATAANAASS ESQENGDAADGATQDGEDTLTPLGQAKKEAAEYLEALQRERAEFINFRNRSQKEQERFRQ HGIIDVLTALLPALDDIDRIREHSEMDESFKAVSAKIDKAFEKFGVEKFGEKGEDFDPTK HDAILHKPDPQAEKETVDTVVEAGYRIGDRVIRAARVVVASPQS >gi|222441567|gb|ABXX02000006.1| GENE 56 70514 - 72376 2861 620 aa, chain - ## HITS:1 COG:Cgl2740 KEGG:ns NR:ns ## COG: Cgl2740 COG0443 # Protein_GI_number: 19553990 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 1 619 1 613 618 763 70.0 0 MGRAVGIDLGTTNSCIATLEGGQPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVT NVDRTISSVKRHMGTDWTVEIDGKKWTPQEISAQVLMKLKRDAEAYLGEPVTDAVITCPA YFNDAQRQATKDAGTIAGLNVLRIINEPTAAALAYGLEKGKEDETILVFDLGGGTFDVSL LEIGKDDDGFSTIQVQATNGDNHLGGDDWDQKIIDWLVGEVKNKYGIDLSKDKIALQRLK EAAEQAKKELSSSSSTSISMQYLAMTPDGTPVHLDETLTRAHFESMTSDLLGRCRTPFNN VLHDAGIGVSDIDHVVLVGGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGV IKGDRKDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVY QGEREFARDNKPLGTFELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTI TGGSGLGKDEIDRMVKEAEAHEAEDKKRKEDAETRNQAESFAYQTEKLVNDNKDKLSDDV AKEVTDKVNELKEALKGEDIEKIKSAQSELMTSAQKIGQALYAQQGAADAAGAAGAAGSA PADDDVVDAEVVDDDDKDNK >gi|222441567|gb|ABXX02000006.1| GENE 57 72732 - 73529 1021 265 aa, chain - ## HITS:1 COG:CAC0556 KEGG:ns NR:ns ## COG: CAC0556 COG2013 # Protein_GI_number: 15893846 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 5 251 6 251 252 261 52.0 1e-69 MRIYNLTDNDDAAIVAQQGIFQVMEWKRDFSVTYGSAMDAYYASEMNVRRRQLVCNLNGK TGAVVQAGAMQWTVGHVEVTTGVKGVGDFIGKLARGAVTNESAVKPEYVGNGVVVLEPTY RHVLLLDPSQMGGAITVNDGLFYACETTIQQHAVMVSRPSAMVAGGEGLFNLSLMGQGTV ALESPVPASEIVTVDLENDELKVDGNFAIAWTNGLQFTVERSTKTLIGSAASGEGLVNVY RGTGRVLLAPVAANLANPNAGSGAA >gi|222441567|gb|ABXX02000006.1| GENE 58 73876 - 74553 898 225 aa, chain - ## HITS:1 COG:BMEI0790 KEGG:ns NR:ns ## COG: BMEI0790 COG1785 # Protein_GI_number: 17987073 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Brucella melitensis # 4 212 3 271 481 115 35.0 6e-26 MSNRKALKGAIAAIASVATLGALAAPALANETSTYNLNGKSVAELAQHGGAQRIAAIGNG TAKNVILFIGDGMGDSEITVARDYLGGANGHFEGLDAVGQPAELGDTNAGTGQYTTPAVL ESHSTERGCYGPQGKTDGSSNDALKRCLANQLKENGGIGSISEQLLDTRADVTIGGGSKY FRQTVQGGECAGKTVWEQAKEMGYQTVENDPAAIAMIVKTAKISR >gi|222441567|gb|ABXX02000006.1| GENE 59 74787 - 75713 553 308 aa, chain - ## HITS:1 COG:BH3454 KEGG:ns NR:ns ## COG: BH3454 COG0730 # Protein_GI_number: 15616016 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 56 230 5 203 273 76 29.0 6e-14 MKKSDISNISNAESVERAEESVRSSVQPSGKFGGKADRLFGADPAGLDESARGIAVLVIV GVAVGLLSGMFGIGGGTVIVPALVWLGLTQRNAAATSMLAIVPTSISGVISYATCGNVDW LAALLLFCGMFVGGQIGSWLLSRLPELVLRWIFVVFLVFVVVNQISFVPSRDQHIAMSAL TGVCLVLLGVVIGILAGLLGIGGGALAVPALSMLFGASDLIARGTSLLAMFPNSITTSVA NLKRRLVHVKAALIIGLVAAVTAPFGTWIAGAVSPRVGSILFACYLCVLLIRSLFVAVKA TRSARASS >gi|222441567|gb|ABXX02000006.1| GENE 60 75821 - 76654 664 277 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 5 213 1 211 279 188 45.0 1e-47 MIGAICLIAYPTFSDWWNRMHQSYAVASYVEQTEDLSGEEKQHMLDAAHAYNEALAANGD RWHLTDEQKQTYENTLDITGTGIMGYVTIPRIKVKLPVYHGTSEGVLQIAAGHLAGTSLP VGGETTHAVISGHTGLPSAKLLTGLDELQKGDTFAFHVLDETYTYQVDQISVVLPSDISK LNIESGKDYATLITCTPYGVNSHRLLVRGHRIPNPKVPDATTYDEPGYMTAVAALVIGLL VSIIGFACVWLARLWRRGRIVKADRVAAGRHSSGRRA >gi|222441567|gb|ABXX02000006.1| GENE 61 76632 - 77018 134 128 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRQIAPIMNIADIAINTSSSAFDFFFGFFDCSEDFTDFKDSDFALSAPSAEPSALSMPSV LSENSANSENPAKSEEPAISAESPAILRRASAVSRRASVLGSPDSLFPLRRRFTLLFAFP LSRNPHYA >gi|222441567|gb|ABXX02000006.1| GENE 62 76974 - 78065 1155 363 aa, chain - ## HITS:1 COG:no KEGG:BAD_1552 NR:ns ## KEGG: BAD_1552 # Name: can # Def: collagen adhesin precursor # Organism: B.adolescentis # Pathway: not_defined # 1 359 13 356 357 323 60.0 8e-87 MKEHTIASRIVATCCAAAVACAAAICALTTRDAVAAPTDSASGSIAITYQRKSNDGADSN AGGASDSGAAGTGDFAIPGATFRLYKVGQVSSGANFEPVAPFTDSTAYPIDWSKVTGYDA QVYRDVANTLAGLIAANGASESAAVDSGETDKAGRLTFAGVEDGLYLVVSDSVKVEGAAG AAAVGGTADEDSYWQCASANMLVAMPQDGVSNGSRELAIEPKTECSTQLKPTLERTVRKV WNDRNDSDGKRPESITVKLLRDGVVFEEVKLNESNKWAHSWTGLSSAHQWAVVEASVPSG YTTLSDVEGDTTTITNTHTPPETPPAHTGSAVQSVAWMAAAICAAALVLLGVVRIARKRE GEQ >gi|222441567|gb|ABXX02000006.1| GENE 63 78249 - 78341 72 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMIVMIPLLPCGGKCMATAVSCVVIFSYGF >gi|222441567|gb|ABXX02000006.1| GENE 64 78373 - 79893 1780 506 aa, chain - ## HITS:1 COG:no KEGG:BDP_0277 NR:ns ## KEGG: BDP_0277 # Name: not_defined # Def: putative sortase-anchored surface protein # Organism: B.dentium # Pathway: not_defined # 1 506 1 494 495 258 41.0 4e-67 MNKVLKGLVAVAASAAMAVAGMFGAGTAMAANTYQITVPAEDTHTYSVYQIFTGSLSTDG TLGDVTAGKNFNENNGAGEGNANLTAAEAAVKIAALESTADDTTKLATISKFVDLSGAAF GSVSKDASLDAAAGYYLLKDSTAVTGDDASTLFIVRVNGPVTVNRKADKPTFEKKVKDIN DSTGDTTGWQDSADYDVNDKVPFQLTATLPTDAADFAAYKTYKLVFHDTQSAGLTFNSES VVVKYEGKQLSADSYTLNTATTDNHTFDLTIADAKSVKGTDSKAITVAAGGKFTVEYTST LNDQAVIGSTGNPNEASLEFSNNPNVGGEGETGETPKDKVIVFTYELDITKTFSDNGTPA ENDLPKFKLYKYDEAQKDYATDLGEVTVVKGTDGKYTTSYKRIDDGKYKLVETHTPAGYN TAADKFFEITAEHDVDAADPKLISLKIDSTAGDTTTGVVATTIVNQKGSNLPSTGGMGTV MLYVAGVAVFVLAGATLVMALRRRNA >gi|222441567|gb|ABXX02000006.1| GENE 65 80041 - 84387 2799 1448 aa, chain - ## HITS:1 COG:CAC2367 KEGG:ns NR:ns ## COG: CAC2367 COG5492 # Protein_GI_number: 15895634 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 736 897 159 317 752 79 40.0 6e-14 MKRLLRGGARSSAPQHYSGARVVSARAFSHARSLTAAAVAVAMMASVAVTAFIPTYSANA EGAAGDNGGICTPQSITLGTDTGHSTEDTGVATYVGGDMYVGKKTGGNMLDVNGPSGSYA VEAEGLTAVKGKLLMHPLKGAWATYFTDADGAKNGYVKDYRGFRFGVVGFGGQYRPKDGS VVLDVKGDSNDSSIGWVKGTQAWGNAGWVGKNKNTEPSYSANIAGDSTTVYGGSSNQILG NGSKNTDTNRYDSRNSVYVPGGMEGTVSWKQTDETIGSTNEKFSDFDTYIKKLSNDLSSL KGFGSVYVTTATYSSDSYNNLKRTKYDVNEYDNGSYTFTINNVNEKVIKFQGDGKASMQV FNLPASFLNDSSSYTGVSFDFSGIPDSASVVINVTGKNVDFHNGWRFWWTDESGTKRELG GSYADSEYAKRAQQIMWNFADATNVVIHGGQGSGTTTRRDANSNLEKADGVWDKSFAMET KDDPAAGMLGSILVPNGSFESHVSTNGRVWVGGDFSMYNPDAVGNTNNGTFYKFLNYERS YSASALDMDQERHNLPWNGSYSTQCAVIQINKVDNNDNALAGTTWGVYKTYADAANGGEA ITTVTDGNALSDKDGVDNGTIQVGNLKTNSNYYLKELGAPKGYQISSKVYRITAGDQGSL VQDVYESADGTNWTPVSDNKIVNYPQSASISWTKNGEDDKPLADSSWEITANDGRTYIVE DNMVQVSSVTILKDGVDAGDSLSITQNSSATLTAQVQPANAAQDVKWESSNSAVATVSDG TVTGIAPGTAVITVKPVGDDSISDSITVTVTAVQVTSLTVKTGNMDVANNASFSLSKGNY QRFTATVDPANTAVSWTSSAESVATVDSDGKVTAVASGTVTITAKAGSLSVSFTVTVPKD THYTVIYFNNPGKWSTPYLWYSLDGTDGSWREAAMTRDYSSNNCGDWSYVKIQNDDRKQI TFKFKSGSDNGTASWDGPSGGGNYVADYSAVITVQKSSGLNTSANVYATAPSGCAANVSA KNVEAKVSAAVYYEQGAADVVLANETVARTTACTKSEPNGDQLGVMCDINADAGKFEVKD LADGTYKLKEHEAPTGYTKTDVWYTFVISDGQVTTVTRHENADDATGTTVGAIEIVFTDT RTKVTWNKIDGTDKAKIAGSSWTIASGKVSDGSFTANGGTPITVTDCTSSCVANGMGDEN ADPGAFTVSGLPVNTNGEIYQLQEARNPTAHAGTPTYYFRLTDSNGDVTLYKDPALTVAA SNIIENPRVLGEVSWSKVSSENDSLLLAGSEWKVTQTSEFKYGNDGVNGTFEKLATSKEY FVTDCMDACSSEGFADEDSSAGKFKLTGLPWGEYTLEENKAPDGYNLGGVVYKFTIGPSS YNGSAWSVALTVDGATGPADNKIENQPGVVLPGTGGDGNMKTLATGLLVAMASVATAGLA LKVRRRRQ >gi|222441567|gb|ABXX02000006.1| GENE 66 84488 - 84781 171 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352711|ref|ZP_03743734.1| ## NR: gi|225352711|ref|ZP_03743734.1| hypothetical protein BIFPSEUDO_04340 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04340 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 97 21 117 117 185 100.0 9e-46 MKISAMNETVCNHLFRDTPWRVSVRLTKTDRRGNLGVFANDFKLQLAERIRRFGTGKQRF YHLYIGGGGGIFVSVIFMNAKVIILRRTHKVREKEKG >gi|222441567|gb|ABXX02000006.1| GENE 67 85292 - 86320 887 342 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 6 337 7 327 332 122 28.0 1e-27 MDKAGIREVAKAAGVSISTVSRAFTRPELVSERTRRKVLDTADRLDFNISRSATALKSGQ TYRVAMLMNEEITSWFNMEVFAGINSVMHDAGYDISLFQHVDTGENRRDFFTNLPVRRNV DAVFVTSFGVEPEEIQQLQRIHVPIIGINTPSQEGFDATISVDDEDGMFSSAQHLINLGH KNIVYVCSDAVDSINSSIDARGQGFIRACKTMEGTHDFKWRVLSVPRGKTFADSALTALL ALDEFPDGICCQTDMMAIPLVLRLDRYGHRTPRDYSIIGFDDSAYADTVNLTTMRQDPFA MGRAAARKAVKLIAGETLENPYEVVRAQLVLRGTDSVYGGDR >gi|222441567|gb|ABXX02000006.1| GENE 68 86459 - 87256 1092 265 aa, chain - ## HITS:1 COG:no KEGG:BAD_1557 NR:ns ## KEGG: BAD_1557 # Name: not_defined # Def: putative ABC transport system membrane protein # Organism: B.adolescentis # Pathway: not_defined # 1 265 15 279 282 394 77.0 1e-108 MEGYTENGAGTDVTDQIGFAGMRRKKKQRRGLSVFQLKVIGAVALVLSAGSTTLVPLIFG SDTSNMTSLTAMVLCEVVSWFAAPIYAWLLVQGFQQTRNRVAYGVQLLLLALIAEVPYDL ATSGKPFDFGSQNPVFGLFIAFAMLAAMKWVAQRYQGAMLVISDIVLVVVAVLWDLLLRV GLRQHLMSLGAVTLGFVLIFWLMRSRENTMMFTAGLFGAVMMIAPGVGVAFVHYYNGKLG YKHSWTKWMFYAFYPVILLICAAVA >gi|222441567|gb|ABXX02000006.1| GENE 69 87561 - 87701 68 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQHTLHALRKVTPVNVAHAAQYAQRNARPAIHEQYARNAKDQAFST >gi|222441567|gb|ABXX02000006.1| GENE 70 87683 - 88465 1021 260 aa, chain - ## HITS:1 COG:MA3051 KEGG:ns NR:ns ## COG: MA3051 COG1011 # Protein_GI_number: 20091869 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanosarcina acetivorans str.C2A # 9 226 6 211 217 68 26.0 2e-11 MENVTHTPKYEVVFFDLYGTLIDIRTDEQCDAAWQALYDTACELGAQYDSVEALRERFEK LEAREMLHQSNHAIVRNGWDEFDVLPVYRSLLMNRNDEAERLLALPQAAQKAAWAFRQGS TSMIRLYPGALEMIEKLQEAGIVVALLSNAQSCYTRAELEMTGLASVLDDVIISSEEKIR KPARDLYMLALDREFVTAKHALMVGNDEKNDIVGARSAGIDGVYFRTEISPADDPDASSY AVRSFKGADYEGLLDYVLNA >gi|222441567|gb|ABXX02000006.1| GENE 71 88572 - 90635 1813 687 aa, chain - ## HITS:1 COG:CAC2679 KEGG:ns NR:ns ## COG: CAC2679 COG1523 # Protein_GI_number: 15895937 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Clostridium acetobutylicum # 30 600 95 618 720 387 37.0 1e-107 MTLVNSLENNFEQPNTRVAEPFPLCLERPLGAVVSQSGTQFAIWAPTAEKITLRLFSRGS KGEDGDALIGQFLMRPEADGSWTYDFADNKHGLYYDFLIERDCGSVDRVADPWAHAAGVN GRRSMVVDLPRTDPEGWDADRMPEVPIAQTVVWETHVGDFSNDPAGGFPESHRGKYLAFT DLGTTLDGHPDFPTGLSYLKKLGITAVQLMPIYDFGSVDETICSRYNWGYDPVNYNVPEG SYSTNPYDGSVRIREVKQMVQALHNAGIKVIMDVVYNHMFSPDNWFERIVPEYFLRRKPN GALSNGSGCGCDMATERAMFRRFVVESVAYWAREYHLDGFRFDLMGLIDVDTMNAVRAAL DEIPDRGPSILMYGEPWSASATAALPGTVLADKAGLPQLDNRIGHFCDTTRDAIKGHVFF SDRPGYVNGGMHENAASVRDAVNAWRASKQPEGVAGQVIQYVSAHDDLTLWDKLCASLAA KSLGSAVSEGDNENSVDVPKALYDADLSEAGLASAGSAIAGAMATVMDANRMAAGIVLTS AGIPFMLSGEEFARTKYGNSDSYDSTRELNWLDWTRAWRMRDLVEYYTKLIALRKSSAEW FDGDRVIVSVEGDELVFRVGDYLVAVNPGRHIGAIDVASTAVAPVSESSRVWCGMGSSTN ASAACISAGDGDYLIVPPHTFAIWRLR >gi|222441567|gb|ABXX02000006.1| GENE 72 90660 - 91559 1293 299 aa, chain - ## HITS:1 COG:SPy1296 KEGG:ns NR:ns ## COG: SPy1296 COG3833 # Protein_GI_number: 15675249 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 34 295 16 274 278 241 49.0 1e-63 MSNKHSSTKVESHGFLHDQKIRRVTGDIFAHLFLAILAVIWLVPIVWVFAESFNKNTAPY TSSFFPKEWTLDNYKVLFTDRNVLDFPKMFMTTFIIACFTCVISVIFVLSVAYCMSRMRF RVRKTFMNVVLILGMFPGIMAVTAIYFILKALGLSSGAMTTVALILVYSAGSGAGFYVMK GYMDTIPTSLDEAALLDGCTRFQVFYKIIIPICKPMIVYQAIIGFLTPWLDFVMAKVICR TQSNYTVALGLWLMLQKEYIQNWYARFAAAAVVISIPIAILFIVMQRFYQESMSGSVKG >gi|222441567|gb|ABXX02000006.1| GENE 73 91556 - 92959 1677 467 aa, chain - ## HITS:1 COG:SPy1295 KEGG:ns NR:ns ## COG: SPy1295 COG1175 # Protein_GI_number: 15675248 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 28 465 11 452 453 355 43.0 9e-98 MTATTLSPREMKRRRKQGADYVPPSPYTVKAALTHGDVFTKLSAVVFGLGNIVRKQYVKG IAMLALEVAFFVFMATNGVDYLSKLPSLGENKGGKKLVDGFWQYVEPDRSVVILLYGVAS LVICVAFVGLWVMSVRSAYKSQVLLEENGKAPSFMDDVHELLDAKAHVLLMFLPTLGIAV FTVLPLIFMISMAFTSYDHKHLVLFHWVGFENFAKVFSNSGGTVNAALFGRVLVWTLVWA FFATFLNFFFGMFVAMIINRKTTHFKGFWRACFSMSIAVPQFVSLLVMHTMLQPQGAVNR MLQTWGWIDGPLPFFTNATWARVTVIIINLWVGIPYTIMQITGILQNIPADQYEAAKIDG ANWWQIFTKITMPYIIFVLTPYLITTFTGNVNNFNVIYLLSSGDPTPLGDSAGSTDLLIT WLYKLTVDKQDYNLGAVIGIMTFIVLAVVSLITYRNSGSYKNEEAFR >gi|222441567|gb|ABXX02000006.1| GENE 74 93193 - 94437 1970 414 aa, chain - ## HITS:1 COG:L128695 KEGG:ns NR:ns ## COG: L128695 COG2182 # Protein_GI_number: 15673665 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Lactococcus lactis # 5 414 4 407 410 120 28.0 5e-27 MKIDWKKAIGLTAAVAMLVPLAACGGSSDGDGKSGASGTEDITLSVWAPQEDQAKDTNWL GQVEENFAKDHPEYNITWKNDVVSEGDASKQVSTDPSAAADVYMFASDQLGVLMDAKAIG QLGTDAEKQVKEQNGDLEVDSVTGTDGKLYGVPYTDNTWFMYYNKSKITEDEAKDFDTIL SKAKVTFPLQNSWYINGFYDGLSLFGEKGNDADAGMVFPKDGADITSYLVDVVANPNFSN DDGASGLAAIKDGSADVLFSGTWSAADVKEALGDNYAATQLPTFTVNGEKKQMKSFAATK AVAYNPNAKNTKAAAQFAAYLGNTDSQKLHYEMRQIPPSDTSLSDLTTDDIAAKAQADTM ANTAILQSGLAGMNDWWTPAETFGKALVNKEITKDNAAAKYQDWIDQTKGTIAE >gi|222441567|gb|ABXX02000006.1| GENE 75 94679 - 96286 1564 535 aa, chain + ## HITS:1 COG:BS_yvdL KEGG:ns NR:ns ## COG: BS_yvdL COG0366 # Protein_GI_number: 16080509 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 11 501 3 523 561 201 30.0 3e-51 MISPSTHPCPQWLSNAIFYEIYPQSFADSNGDGIGDIPGITAKLGYITDLGCNAIWLNPC FDSPFKDAGYDVRDYKKVAPRYGTNDDLAALFAAAHERGMHVILDLVPGHTSEEHEWFRH SAEVDRNEYSDRYIWTDSWISGGDGLPFIGGETPRNGTYILNFFKCQPALNYGFAHPQRA WQKPAFGPEAIATCDAMVDVMRFWLSLGADGFRVDMADSLVKQDDAGKPFTIRTWQYMFS KIRPEFPEAAFVSEWGRPNESLEAGFDMDFYLDWRWDGIPNGYNMLLRNVDNPLSRDGDK SYFNVDSGTPISDFLEQYEPQLREAEHLGGTFNFITCNHDTARVAPRLSEREIALAYCTL FAMPGVPFIYYGDEIGMRYRDLPTKEGGYVRTGSRTPMQWQSLASLNASYATPAITGGNY LPVDPSPDAPNVADSQSNKASLWYTVRRMLHLRGNCDPLQSRASFHPISRRRLFAFERST DLERVIVAVNPSTNSERLQLPNGHYRKIFEIGETKVDFNTLTLGTQSFAILKATA >gi|222441567|gb|ABXX02000006.1| GENE 76 96644 - 98806 2560 720 aa, chain + ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 13 713 4 710 724 485 42.0 1e-136 MTATQQTESAERIARPLIQLAKLNGISTSYIDQLGTYVEIRDEVLVSVLAALGVDASSDE AIAASYELTKQRIADTLVEPTIVKFIGKEATTPIRAKGHDVTLRLLLEDGTRYEGNLCMY LAPQTDGSLTLTLPDDIPAGYHTLRVNAGPLHGEARLICAPARVPLPPAVAEKQRWGWMA QMYSIRSAESWGVGDYGDLKLLLTDAAEKSHADFMLINPIHATAPVEPLEPSPYLPESRR FMNVTYIRPQDIEEYAGLDEAALAEVERLHAEVAPANDNADELDINSAWWHKRQALQLVF KVPRSAERQAAFEAFKEAAGPDLRAFAAWSVAFQMWGAPWEGTWFAETNRDSPEVAELMR DHADMVEFECWLQWIADEQVTAAQTAARESGMALGLMQDMAVGVHSLGADVWWNPERFAV GSVTVGCPPDFYNQQGQDWGQPPFNPNYLAKTGYGVYREMVHNMFSHAGAVRIDHVLGLF RLWWIPQGEGARGGAYVTYDYEAMIAILTIEASRVNGLVVGEDLGTVPDYVRTVLAEHGL LGCTVEWFARVDDSPNAGDPYADPADYREYALASVTTHDLPPTAGYLQFEHVKLREELNL LTGPVEEFQASATAERQAMLDRLVESELITPEIAADVDDHIQEIVEAMHKMLLRSPSVLL QAALVDGVGETRSQNQPGTSSEYCNWRVPLAGPDHKVVHTDEVFDLPRVKSLSAIMNGEK >gi|222441567|gb|ABXX02000006.1| GENE 77 99187 - 99789 245 200 aa, chain - ## HITS:1 COG:lin0382 KEGG:ns NR:ns ## COG: lin0382 COG3340 # Protein_GI_number: 16799459 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Listeria innocua # 3 192 4 197 209 157 44.0 9e-39 MKLFLCSHFSSVGSLIKEEIDNKKVAFIPTASLHEGYTGYVGSARKLFKKLGASVTEIDI STEAYSTIQAVFEDADVIYFTGGNSFFLMDQLRKTETDELLKKELANGKLMIGELAGAII CAPTIQYIEQMDEKPEDYSQEDNEGLDLIDFYVLPHYLTAPFKKITERIMAEFSDLNICA INNHQAIIVNDEGSKVICKD >gi|222441567|gb|ABXX02000006.1| GENE 78 99804 - 100262 187 152 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSDLLLNFVFKLYHKTCEQFYRNFGIYEKSPNSFLPGLSRSIINQFRFHNFLCLCLASV HLPYPFHLVFSFQLFGHVVLLCQLWHDQLHAVSCRFVNLSAILSYVHPSICDGTFLCTFN DNDTKKATQGTADHYSMYACKRLPHRRVDWYA >gi|222441567|gb|ABXX02000006.1| GENE 79 100259 - 100858 638 199 aa, chain + ## HITS:1 COG:no KEGG:BAD_1562 NR:ns ## KEGG: BAD_1562 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 198 1 198 200 322 85.0 8e-87 MKFLSPDSGFMRGLSDAVDAIWINILMLVTSIPIVTIGAALTAGHDAARRSLAGEGTVTR NYFTAFRSNFVKATGYWLIFGIAGAISVYSWIVLQITPLLIPKFALSIVWVIGFEWIWAL QSRFENSFWRTLGNAFVFGVSNIGHTLGMAAIDAVYIALLVGSWFYMPQGLFLLLVLGYG TMIMIHVPIFEHVFRKYVK >gi|222441567|gb|ABXX02000006.1| GENE 80 100991 - 101833 1106 280 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 16 280 39 304 304 253 51.0 2e-67 MISGEKVKHGGLWTVLFSLVSLAWVFPIVLVIINSFKQKAYISRDAFSIPTGKAFVGLEN YTRGIETTNFFASFGWTLLITVGSVILILVCTSMCAWWIVRVNNWAAKLLYTLFLFNMIV PFQMVMFTLSKLADMLKLNTPWGLCIVYLGFGAGLAVFIFTGVVKGIPQSLEESAMIDGA SVPRIFFQIVVPIMKPSIVSVAILQAMWIWNDYLLPYLTLDLGKYKTISVAIQYLKGGYG SVDMGAMMACLVMAIIPIIVFYLICQKHIVKGVMAGAVKG >gi|222441567|gb|ABXX02000006.1| GENE 81 101830 - 102684 1031 284 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 9 284 5 281 281 273 51.0 2e-73 MISMAGKAIRKWWALFALPTFAAFIIGFVVPFIMGVYLSFCKFTTVTDAEFVGLKNYTRA LQDKEFLHALGFSTLLTIVTTIVINVVAFFIAYMLTKAIKGSNIFRSVFFMPNLIGGIIL GYIWMLLLNGILAHWARSLTYSATYGFWGLVVLVCWQQIGYMMIIYIAGMQSLPTDVLEA ASVDGANGTQTMFKIIIPLMMPSITVCSFLCVTNGFKLYDQNLALTNGAPSNMSEGLALN ITRTFYGRVGWEGVGQAKAVLFFVLVAIVALIQNKLTTSKEVEA >gi|222441567|gb|ABXX02000006.1| GENE 82 102847 - 102927 74 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDIATSFDNQKHYNVGKFASQDMQK >gi|222441567|gb|ABXX02000006.1| GENE 83 103027 - 104037 1260 336 aa, chain + ## HITS:1 COG:CC1627 KEGG:ns NR:ns ## COG: CC1627 COG1609 # Protein_GI_number: 16125873 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 3 332 2 331 335 124 30.0 2e-28 MKSSIQDVAQLAHVSISTVSRSFTRPDLVSKATRDKVMKAADELNFSISRSAAALKTGRA LRIAVPVSGRLNLWFSSSIIEGLNQIFHDEGYDISIYQMSSIEERREFFDMLPVRRNVDA VIVISFDIDANEIDQLKSVNVPIIGINSSLPEERGFSAAVRIDDKQGSELAARHLMTLGH RDIAYIRTNREVTLHFSVQGRFESFMACCQANGVEPRVLVTDESKNNISKVVTQLLSLDH MPTAIACQEDGIAVPLLFQLERNGFTVPNDISIIGYDDSIYARDLGLTTVRQTPVEMAQE AARMTLDLIEERPLDEPFKTFPAQLIVRSTTARLHR >gi|222441567|gb|ABXX02000006.1| GENE 84 104296 - 105351 888 351 aa, chain + ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 5 341 3 330 335 111 29.0 2e-24 MAKPTIANVAELAGVSQATVSRALRGATNVTEETRIKVQRAADQLNFTLSKSASALASGK TMRVILLVSGKLNEWFNSGVLQGVYEELAPVGYDVTPAFITDRSELDRFFSQLPKSRNAD AIIISSFQLMPAMRDQLQAIDLPTVGVNVPAESGYFDASISIDNSSAMTMAVRLLRSLGH TNIAFCSDYIPADMVYNTSQRTQAFADAAQANATDGITFSLLTADAHDAPLSKSDLASQL TAKLLSLPERPTAVCVETDQVAIALVKELRKQQLNVPEDISVLGFDDAEIAQAADLSTIR QEPIELGRIAGRKVLQLLRNEPLEHPHELQDPLLVLRNTTSRIDSGAAPAE >gi|222441567|gb|ABXX02000006.1| GENE 85 105512 - 106891 2037 459 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 14 442 13 441 443 270 39.0 3e-72 MKQGIITKTCAVAAALAMGVSLAACGGGSSSADSDKGHVYFMNNKSEVVDQYKQLAEMYT EKTGVQVDVQTGASGTYDATMSSELAKSNAPTMFNISGFDQFAKYQKYCEPLQDTEAYKL LTDDGKAYSYTIDGDSFTLPYAAEWYGIIYNKKIINDYASKDYAVIKSADDIKDYKTLKA VAESINEHKDDLGVDGAFATPGLDASDTYRFSAHMGRIPLYYEYKDMNTTFSKTIKGTYL DNYKDLFDLELETSPTDPSLVSSKTYDDVTSEFALGQVAFYPNGVWAYTQIKGNEVADDD LGMLPYYMGIKGEEESGPAGVYDASWAVNKNASDKDKQATLDFIKWMVTDDEAKKILSQD MGFSVPFTTFDGDEFQPDNPLTKIARSYAVDGKTEVRSFTVPDQQWQDDVAAALIEYAQG TGDWSKVKSAYVDGWATEWNNNEESLGSVPQAQKFDQQG >gi|222441567|gb|ABXX02000006.1| GENE 86 106990 - 108750 1904 586 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 14 584 31 545 546 381 43.0 1e-105 MVQQEIDTTDPALWWKQAVVYQVYPRSFKDSRGSGLGSIAGVTEKIDYLAELGVDAIWLS PFYPSQLADGGYDVDDYRNVDPKLGTMDDFDELAKAAHEHGIKVVVDIVPNHSSNLHEWF KAALAAAPGSPERDRYIFRDGKGPNGDQPPTDWIASFGGPAWTRVPDGQWYLHMFTKEQP DWNWKNPEVRADFIKTLRFWLDHGADGFRVDVAHGLAKDLDRDDLESYKVCEHVLPSDGS HPLYDRDEVHDIYREWRKVFNEYNPPAFAVAEAWVNPDRQHLYASTEELGQVFNFEFAKK DWIRDDMHLAIEEGLESAERSGSSATWVMSNHDVPRHASRYGLPQVPASSHHQLAKDWLL RDGTTYEENRELGAKRARAAILMELALPGSTYIYQGEELGLPEVADIPWNKLEDPTAFNS VREQIEKGRDGCRVPLPWVAADAPKLDDPDDEFGHDGSFGFSPAGAEHDPHLPQPKWYKD FAVDVEDADPNSMLNLYRKALSLRHNLMPQDTELQWLDEDRPSDVRDGADGQRGGVIAYS RSNGWASVTNFGERPAELPQGDVILASGELTEDGRLPQDTTVWLQL >gi|222441567|gb|ABXX02000006.1| GENE 87 109105 - 110430 2136 441 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 11 440 4 441 443 354 45.0 2e-97 MNRTIKAAVGMVAIAAMSVGTLGACGSSSSSDDGKGKVYYLNFKPESNDEWQKLAKDYTK ETGVEVKVQTAASGTYEQTLKSEIAKSEAPTLFQVNGPVGYQNWKSYTDDMTDTEPYKQL INKDVALKDGSKVVGVPYAMETYGLIYNKDLLAKYIATDGAKIKDVKDIDNFDTLKAVAD DIQAKKDQLGVKGAFTSAGFDSSSDWRFKTHLANLPLYYEFKDDNITKQPATVKGTYLPE YKNIFDLYLKDSTTEPTQLSSKTGDDATSEFSLGEAVFYQNGTWAWTDLQKNGMKAESIG MLPIYTGVKGEENQGLATGSENYWCINSKASDADKQATKDFLKWVVTSKTGIESLSSAMG FTTPFKSFSDVKSDNPLVQAAVEDQNSDKTAVSWNFTMMPSEEWKNQLGSALLEYAQGTG DWDAVKTAFVDGWKTEYDASH >gi|222441567|gb|ABXX02000006.1| GENE 88 110785 - 111489 804 234 aa, chain - ## HITS:1 COG:mll2186 KEGG:ns NR:ns ## COG: mll2186 COG0406 # Protein_GI_number: 13472025 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mesorhizobium loti # 12 233 2 191 193 112 37.0 7e-25 MTDTQVGSKDASSIAPGRLVLLRHGQTVWSESGQHTGRTNIPLTDTGCEQARAAGERLRE AFPNGFDQGCMFASPLRRAQQTAQLAGYGDFKVLDEIAEWDYGRAEGRTRQEVSEAGGFQ WDVWRDGPRSLPESLEGDWVETLPSGEQVPVHNGPGETVEEAAARTRDAIDAVMPLLNAG HDVLLVAHAHVLRILTSQWLDVDPHFARLLRLDTAHYCVLSQYKGDNVIEHWNC >gi|222441567|gb|ABXX02000006.1| GENE 89 111619 - 111999 384 126 aa, chain + ## HITS:1 COG:no KEGG:BDP_2209 NR:ns ## KEGG: BDP_2209 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 14 121 1 108 109 140 64.0 2e-32 MSEMPDPESSADRIVASLHNVDEKVNALREQRINDPDDLCDKMFKVAAPTLAGLVFGKLF ELAWRKSVGRKAVLPDGTTDKRKELALNLVFGVASAGLGALVSQLSDRGSQALVDRRHSR QSRRIR >gi|222441567|gb|ABXX02000006.1| GENE 90 112216 - 112995 885 259 aa, chain + ## HITS:1 COG:SA0367 KEGG:ns NR:ns ## COG: SA0367 COG0778 # Protein_GI_number: 15926083 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Staphylococcus aureus N315 # 1 232 1 227 251 146 37.0 3e-35 MSNILHNATVDTLLERRSIRKFKPKPLSDDIVETLETVAQHAASSQFLNDWSAIRITDPA AKKRLAEIGGQPYIATAPLLYVFVLDEHRNAAIAASKGVETASDEFTLNGSYRYTQAQND AVLALHAMETAAYSLGLGCVILGSLLNDVPALIDLLNLPEYTYPVLGLAIGKPDQDPALK PRMPRSMQFFENEYPSNNETLLAGLQDFDEEVHRYYDLRNTERPVDPFSDQIASNAVDSG VTSKAVAPNAKRQGFRLER >gi|222441567|gb|ABXX02000006.1| GENE 91 113001 - 113252 263 83 aa, chain - ## HITS:1 COG:no KEGG:BDP_2217 NR:ns ## KEGG: BDP_2217 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 83 1 83 83 142 92.0 7e-33 MHYFVPKRCVESNKIMYRDKATARQAADQSWRERGTELWVYRCEFCGTWHLTHRDPQSSY TYVPFNQQIKPHSRKKGYKPRRK >gi|222441567|gb|ABXX02000006.1| GENE 92 113264 - 113737 -221 157 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGSRTATIGIVAWFRFCRPILVVGRYIGFAVVMAQVRRPVPFRTRKLRPGRGDGTALER VWESSTPPHSTYGPSGRAPSGFPEGPFLFPRTGVFLHSVEVFGRRKDCRRDDSSTHWVFC SAGRPVGGRIPPPTGSPGTLGDPRNSRGASCPYPMVE Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:41:20 2011 Seq name: gi|222441566|gb|ABXX02000007.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont6.1, whole genome shotgun sequence Length of sequence - 88369 bp Number of predicted genes - 71, with homology - 70 Number of transcription units - 40, operones - 16 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 88 - 147 2.5 1 1 Tu 1 . + CDS 247 - 1863 1483 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 1909 - 1956 8.4 - Term 1897 - 1944 0.8 2 2 Tu 1 . - CDS 1993 - 2283 392 ## BAD_0566 hypothetical protein - Prom 2476 - 2535 2.0 + Prom 2278 - 2337 1.8 3 3 Op 1 . + CDS 2372 - 3265 724 ## BAD_0567 hypothetical protein 4 3 Op 2 40/0.000 + CDS 3269 - 4000 1071 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 5 3 Op 3 1/0.000 + CDS 4012 - 5841 1339 ## COG0642 Signal transduction histidine kinase + Term 5876 - 5930 9.7 + Prom 5867 - 5926 4.0 6 4 Op 1 . + CDS 6000 - 6389 435 ## COG1278 Cold shock proteins 7 4 Op 2 . + CDS 6393 - 7574 1064 ## BAD_0571 hypothetical protein + Term 7599 - 7643 6.8 - Term 7587 - 7631 10.4 8 5 Tu 1 . - CDS 7650 - 8666 966 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 8693 - 8752 2.0 9 6 Tu 1 . + CDS 8808 - 11393 2380 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 11427 - 11471 10.8 - Term 11401 - 11471 23.6 10 7 Tu 1 . - CDS 11495 - 12820 1343 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Prom 12884 - 12943 2.6 11 8 Tu 1 . + CDS 13004 - 14542 1006 ## BLJ_1463 purine catabolism regulatory protein-like protein 12 9 Op 1 . + CDS 14706 - 16064 1953 ## COG0477 Permeases of the major facilitator superfamily + Prom 16104 - 16163 2.4 13 9 Op 2 . + CDS 16214 - 16972 1037 ## COG1402 Uncharacterized protein, putative amidase + Term 17025 - 17085 19.1 - Term 17017 - 17069 9.6 14 10 Tu 1 . - CDS 17146 - 18582 2084 ## BDP_0783 DNA repair ATPase - Prom 18679 - 18738 3.4 + Prom 18619 - 18678 2.0 15 11 Op 1 13/0.000 + CDS 18699 - 20090 1580 ## COG0124 Histidyl-tRNA synthetase 16 11 Op 2 . + CDS 20135 - 21934 2409 ## COG0173 Aspartyl-tRNA synthetase + Term 21952 - 22012 17.0 + Prom 21989 - 22048 4.0 17 12 Op 1 16/0.000 + CDS 22093 - 23646 1799 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 18 12 Op 2 1/0.000 + CDS 23643 - 24407 541 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 24501 - 24558 17.3 + Prom 24724 - 24783 3.4 19 13 Op 1 16/0.000 + CDS 24859 - 25656 257 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 20 13 Op 2 31/0.000 + CDS 25696 - 26535 1063 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 21 13 Op 3 17/0.000 + CDS 26535 - 27212 915 ## COG0765 ABC-type amino acid transport system, permease component 22 13 Op 4 . + CDS 27219 - 28361 1295 ## COG0765 ABC-type amino acid transport system, permease component + Term 28388 - 28438 15.7 23 14 Tu 1 . + CDS 28546 - 29532 897 ## COG2326 Uncharacterized conserved protein 24 15 Tu 1 . - CDS 29514 - 32096 2808 ## COG4581 Superfamily II RNA helicase - Prom 32117 - 32176 3.0 25 16 Tu 1 . + CDS 32156 - 33532 1298 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 26 17 Op 1 40/0.000 + CDS 33672 - 34406 532 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 27 17 Op 2 . + CDS 34414 - 36090 917 ## COG0642 Signal transduction histidine kinase 28 17 Op 3 . + CDS 36090 - 37829 1115 ## BLLJ_1417 hypothetical protein + Term 37859 - 37899 -0.4 + Prom 37832 - 37891 1.6 29 18 Op 1 16/0.000 + CDS 37985 - 38977 1517 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 39031 - 39069 4.5 + Prom 39028 - 39087 2.2 30 18 Op 2 21/0.000 + CDS 39115 - 40656 2049 ## COG1129 ABC-type sugar transport system, ATPase component 31 18 Op 3 11/0.000 + CDS 40656 - 41729 1456 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 32 18 Op 4 1/0.000 + CDS 41726 - 42751 1382 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Prom 42822 - 42881 2.3 33 18 Op 5 . + CDS 42952 - 44505 1588 ## COG0477 Permeases of the major facilitator superfamily + Prom 44514 - 44573 3.2 34 18 Op 6 . + CDS 44596 - 46254 2048 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 35 19 Op 1 5/0.000 + CDS 46359 - 46979 877 ## COG0740 Protease subunit of ATP-dependent Clp proteases 36 19 Op 2 24/0.000 + CDS 46982 - 47683 928 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Term 47729 - 47773 9.1 + Prom 47710 - 47769 1.7 37 20 Tu 1 . + CDS 47829 - 49142 267 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 49237 - 49277 -0.9 + TRNA 49310 - 49386 74.1 # Arg ACG 0 0 + TRNA 49428 - 49501 73.5 # Arg ACG 0 0 + Prom 49708 - 49767 2.1 38 21 Tu 1 . + CDS 49860 - 51230 1436 ## COG3004 Na+/H+ antiporter + Term 51280 - 51324 8.1 - Term 51319 - 51353 1.4 39 22 Op 1 . - CDS 51354 - 52025 688 ## COG4122 Predicted O-methyltransferase 40 22 Op 2 36/0.000 - CDS 52030 - 52959 969 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 41 22 Op 3 . - CDS 53018 - 54940 1805 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 42 22 Op 4 2/0.000 - CDS 55027 - 56397 689 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 43 22 Op 5 2/0.000 - CDS 56394 - 57923 931 ## COG0606 Predicted ATPase with chaperone activity 44 22 Op 6 . - CDS 57923 - 58375 317 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 45 23 Tu 1 . - CDS 58548 - 59423 874 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Prom 59551 - 59610 3.0 + Prom 59493 - 59552 2.0 46 24 Tu 1 . + CDS 59753 - 61066 1910 ## COG2873 O-acetylhomoserine sulfhydrylase + Term 61111 - 61162 14.9 + Prom 61152 - 61211 2.5 47 25 Op 1 3/0.000 + CDS 61333 - 61884 903 ## COG4720 Predicted membrane protein + Term 61909 - 61957 8.2 + Prom 61901 - 61960 1.9 48 25 Op 2 34/0.000 + CDS 62007 - 63614 1710 ## COG1122 ABC-type cobalt transport system, ATPase component 49 25 Op 3 . + CDS 63614 - 64432 940 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 50 25 Op 4 . + CDS 64441 - 65460 953 ## BAD_0602 regulatory proteins + Prom 65465 - 65524 3.9 51 26 Op 1 36/0.000 + CDS 65593 - 66384 815 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 52 26 Op 2 . + CDS 66426 - 69068 2717 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 69093 - 69136 10.0 - Term 69069 - 69137 12.2 53 27 Op 1 19/0.000 - CDS 69160 - 69906 614 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 54 27 Op 2 . - CDS 69983 - 72592 1416 ## COG4585 Signal transduction histidine kinase - Prom 72621 - 72680 3.5 + Prom 72606 - 72665 3.0 55 28 Op 1 . + CDS 72770 - 74113 1353 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 56 28 Op 2 . + CDS 74158 - 74958 892 ## COG0345 Pyrroline-5-carboxylate reductase 57 28 Op 3 . + CDS 74976 - 76073 1556 ## COG0012 Predicted GTPase, probable translation factor + Term 76136 - 76191 10.6 58 29 Tu 1 . - CDS 76016 - 76213 58 ## 59 30 Tu 1 . - CDS 76322 - 76501 314 ## COG3304 Predicted membrane protein - Prom 76708 - 76767 2.2 + Prom 76628 - 76687 1.8 60 31 Op 1 . + CDS 76765 - 76875 79 ## gi|154487112|ref|ZP_02028519.1| hypothetical protein BIFADO_00952 + Term 76974 - 77019 0.2 61 31 Op 2 . + CDS 77106 - 79157 2126 ## COG0477 Permeases of the major facilitator superfamily + Term 79195 - 79238 9.1 + Prom 79408 - 79467 2.4 62 32 Tu 1 . + CDS 79521 - 80345 905 ## BAD_0613 hypothetical protein 63 33 Tu 1 . - CDS 80556 - 81572 1344 ## COG2855 Predicted membrane protein 64 34 Tu 1 . - CDS 81677 - 82972 894 ## COG1757 Na+/H+ antiporter + Prom 83081 - 83140 2.2 65 35 Tu 1 . + CDS 83172 - 84089 1017 ## COG2768 Uncharacterized Fe-S center protein 66 36 Op 1 . + CDS 84218 - 84697 286 ## BDP_0831 phosphoribulokinase (uridine kinase family protein) 67 36 Op 2 . + CDS 84735 - 85325 897 ## BDP_0832 hypothetical protein + Term 85381 - 85422 11.0 - Term 85190 - 85232 -0.2 68 37 Tu 1 . - CDS 85337 - 85498 90 ## gi|212716988|ref|ZP_03325116.1| hypothetical protein BIFCAT_01934 - Prom 85537 - 85596 1.8 69 38 Tu 1 . + CDS 85446 - 86285 862 ## COG0730 Predicted permeases + Term 86313 - 86363 9.2 70 39 Tu 1 . - CDS 86421 - 87347 1003 ## COG0582 Integrase 71 40 Tu 1 . - CDS 87930 - 88367 243 ## COG3236 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|222441566|gb|ABXX02000007.1| GENE 1 247 - 1863 1483 538 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 533 3 536 547 575 56 1e-163 MAKIIAYDDEARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEID LDDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVTAGSNPIALRRGIE KASEAIVKELIAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR FGLDLDFTEGMRFDKGYIAPYFVTNAEDQTAVLEEPYILLTSGKVSSQQDVVHIAELVMK TGKPLLIIAEDVDGEALPTLILNNIRGTFKSCAVKAPGFGDRRKAMLQDMAILTGAQVVS DELGLKLDSVDMSVLGTAKKVIVSKDETTIVAGGGSKEDVAARVAQIRAEIANTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AAKAESDVKLEGDEATGAAIVFRAIEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAAT NEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPPAAAPAAGADMGY >gi|222441566|gb|ABXX02000007.1| GENE 2 1993 - 2283 392 96 aa, chain - ## HITS:1 COG:no KEGG:BAD_0566 NR:ns ## KEGG: BAD_0566 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 96 1 96 96 93 89.0 3e-18 MAQFQVDSEQIQSSSAAVNASIQAIRQSVQGMYANLNNLQSVWRGGAATQFNAVAEQWRA AQQQMEQSLESIQHALTQASALYAETEMQASRLFAQ >gi|222441566|gb|ABXX02000007.1| GENE 3 2372 - 3265 724 297 aa, chain + ## HITS:1 COG:no KEGG:BAD_0567 NR:ns ## KEGG: BAD_0567 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 24 297 6 279 279 313 66.0 6e-84 MATVNAMNEKTRVVVGGCAKMCPIGVSRQRQNFRNRWNVAACMLLSMLLCCAMMLWITPV GSAEDNTGTGITATENITDTENLLGSNVAEITDAISATKQETGVTVHLLYLASFNTEEKP AKWASALLESLDPKPNTVLLAVASNDGNLVVAVSSNSDEWLKKKSTVDALSDAAQKPLME STPDWSKSATDMMDQIAVQKKTSTSSQTVLLGVGGMIAVLVLLIVIMVVFHILRKRGIIK RKVRKHAGRHAAITVRSEPVKAWSVDGELSVEAHDGGQTSKEDSESVQETSSEQSDA >gi|222441566|gb|ABXX02000007.1| GENE 4 3269 - 4000 1071 243 aa, chain + ## HITS:1 COG:MT0782 KEGG:ns NR:ns ## COG: MT0782 COG0745 # Protein_GI_number: 15840172 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 6 242 13 240 240 259 55.0 5e-69 MSKPIEASIVVVDDEPSIRELLVASLHFAGFEVNTAASGSEAIEVIEKIQPDLIVLDVML PDIDGFTVTRRIRQEGITTPVLYLTARDDTQDKVMGLTVGGDDYVTKPFSLEEVVARIRA ILRRTQEQVEDDPIIRVADLEINEDSHDVSRAGQPIDLSPTEYKLLRYLMDNEGRVLSKA QILDHVWQYDWGGDAAIVESYISYLRKKVDGLTVEDENGEKHKVAPLIETKRGIGYMIRA PKN >gi|222441566|gb|ABXX02000007.1| GENE 5 4012 - 5841 1339 609 aa, chain + ## HITS:1 COG:Rv0758 KEGG:ns NR:ns ## COG: Rv0758 COG0642 # Protein_GI_number: 15607898 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis H37Rv # 40 589 9 484 485 179 30.0 1e-44 MSQDTRQPSADPQNTQKNGGQPRPQRVPWHRRIGRKVQAIPLSTKLVTCIIVLLTIGTIG ISFSIRTLVGNYLLQKTDTQLVNQAQMIFNSMDSLDSTTSEDGRSLVNTYYVEVRDSEYK RTGAGSVPMLREGVVSEPSLPSDGSIDGVTLGEPFTTQAVVHVTTSRVPDHAIMQAAQSP WRVVALPWSEKTKTGQVKDSGVVFIGLSLSDQIDTSNTLTRFCAMVGIAVVLIGAILGTI VVQSTLAPLKRIEKTAAKIAAGDLSQRVPDLPENTEVGSLSMSLNTMLTRIEESFHAQEE TTEKMKRFVSDASHELRTPLAAIHGYAELYKMQRDMPGALERADESIEHIEASSARMTVL VEDLLSLARLDEGRGIDITQQVKLTSVVNDAADDLHALDPDRGITCGQVVLQAGSDMEHP SRLAFQPGTMPDITLTGDASRLRQVVTNIVGNIHRYTPADSPVEVSMGVLPASISPESLS RMPSNEQSLHHFIEAIEVGQSMQVGMNYAIVRFSDHGPGVPADARSKIFERFYTADPSRA RQKGGTGLGMAIAQSVVKAHHGFICASGSDGTGLTLTVVLPVAPVEPRPLAQTSDERKVD KRGRRPKKQ >gi|222441566|gb|ABXX02000007.1| GENE 6 6000 - 6389 435 129 aa, chain + ## HITS:1 COG:ML2147 KEGG:ns NR:ns ## COG: ML2147 COG1278 # Protein_GI_number: 15828153 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium leprae # 1 126 1 135 136 108 40.0 2e-24 MPSGRVRWFDANKGYGFIQNEQGADVFLPAAALPEGVKTLRKGAKVEYSVVEGRRGPQAM GLTLVASAPSLVKATRPKPDDMAAIVEDLIKLLDSAGNQLRRHHYPSPAESKKLATLMRA VADNFDVQE >gi|222441566|gb|ABXX02000007.1| GENE 7 6393 - 7574 1064 393 aa, chain + ## HITS:1 COG:no KEGG:BAD_0571 NR:ns ## KEGG: BAD_0571 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 393 1 394 465 446 75.0 1e-124 MSDTTMDPKAIAQAVAIEVADEDGQVGDFVEAIDLGDNVTDFRFETCIRGYEGWQWSVTL YRDAELDHWTVNESSLVPTDKALRPPEWIPWKDRLEPTDLAVTDSIGTDPDDPRMEEGFR RTEPVESAESVSDDVQTVEAADGGDNAGADADVVDGSQDENAVASVTSEEDIDEAVEEFD LSRRHVLTPLGRSQTAKRWYEGPRGPKSLSTKTSDGNPCSTCGFFIPLKGELNLLFGVCA NKWSPDDGRVVSIDHGCGEHSEIEPPEPSHLWVQSKPAFDDLHIDIIAQAPRDERGSVEL IEQLSVNEDGNPNDEEEASEADIEANTVDDDANQEEVLEHTAQQDEPEVESTVDLSDDEE PVIVESEEDEATDAEPTEAEETDTAEENAPEAE >gi|222441566|gb|ABXX02000007.1| GENE 8 7650 - 8666 966 338 aa, chain - ## HITS:1 COG:MT2061 KEGG:ns NR:ns ## COG: MT2061 COG0589 # Protein_GI_number: 15841487 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 20 336 8 291 295 77 28.0 5e-14 MSDTTLNATESGMLADIRLHDIVVGVDGSDESFAALRWALNEASLTGQQVNAVFAWSHSW DMGSEPEDEEQWAEVRHEIAQRLRDWVSKASQGMTINEDHVKLTSVKATGTSALLEIGKD AQQIVVGRRSLGRVARWFLGSLSESLAEAAQVPVTIVRILDDEESSVQDAIANALTPSEN TVTYDLPGSPLPKNQRPIVVGVDGSETSRHALRFAIDLAALHHAPLQVMFCWQLKDLGVI EGYENAIAPIAVGQERAERILDELLDSVEIPTAGIPDDFQIESHAFHISAAKGLIAASRY ARHLVVGSRGLSGLDAHFLGSVSKQIVNFADCTVTVVH >gi|222441566|gb|ABXX02000007.1| GENE 9 8808 - 11393 2380 861 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens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gi|222441566|gb|ABXX02000007.1| GENE 10 11495 - 12820 1343 441 aa, chain - ## HITS:1 COG:STM3334 KEGG:ns NR:ns ## COG: STM3334 COG0402 # Protein_GI_number: 16766629 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Salmonella typhimurium LT2 # 29 425 22 404 426 392 48.0 1e-109 MSTQLFINAHIATGMPGSTAAETAAIQDILVEDGKFISIAPHLKATLEAQGKDMASVEVV DLGGKLVCPPFCDTHLHLDYVFTARKPGAVNESGTLFEGIQRWSETKADLTVDEIKERAK IGIAKEMRHGVQFIRSHADVTDPNLTSLKALLELKEELKDTVTLQIVSFPQEGMYSYEGP HGESGADLVEEGLKMGADCVGGIPHFEQCREFGERSMHTVVELASKYDKLIDVHCDETDD PNSRYLELLSALAYRAGIGSKTTASHTCSLGSADNAYFFHLTKLLKAAHINFACAPTENL YLQGRQDTFPKRRGITRVKELTEAGVNVSLGQDSMQDPWYPVGNGNMMLILDYVLHLAQM MSFEEIDDALKFLTVNGATTLGMRDSYGLEAGKPANFIVLDASSVFDAVYERCEVLRSVR EGRTLFTRNTSITADLDLLTL >gi|222441566|gb|ABXX02000007.1| GENE 11 13004 - 14542 1006 512 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1463 NR:ns ## KEGG: BLJ_1463 # Name: not_defined # Def: purine catabolism regulatory protein-like protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 504 1 498 500 502 52.0 1e-140 MAVTVREVLDDALVATAEPQVEVAGDSLDNPVRWVFTNEREDVASFLAGGELLVVEGRSL VADGREKRADEYVKSLVNADIAALMVELVEEVTQLPKMLVKAAKHEGLTIIGLRSRIPFV DICQSVNTMIVRDQMRMQMQVDVMSTSLRSELAQASNPKAVADGIANLFGEDVVIFDVDG LEVARAGQNINTATDCGIVLALEEQKRPLGALEISQRNTVFDEAMCRRIEQIAAPVLTLY LDGGARVGMVAHLIAGPEDGVHVSSMEAREGHAMLDALGFAASGVYMPFAMKLKSVANAM PAIVSMIDDFESNGGCESICLLEGDLMIGFLAAQDSGGDVSVFSDRCLHALTQVAANEYV YTVHGRAALDTISLMDAFGALRSVIRTCISNDAECPYGTLECVDSSLLERMLGMERTDEA VRMVITQTVGHELMHNAMLIDTLCACFDNLDNKTGACEQLGIQRQTLYNRLDKVTQIVGI APTDKISWSMLLLGAKMAKSQHNHTISSTSAL >gi|222441566|gb|ABXX02000007.1| GENE 12 14706 - 16064 1953 452 aa, chain + ## HITS:1 COG:AGl1071 KEGG:ns NR:ns ## COG: AGl1071 COG0477 # Protein_GI_number: 15890656 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 25 449 33 456 516 275 33.0 2e-73 MSASATIATANRASVSEQSEEQKMVKKVAVSSFLGNFIEWFDYASYSYFATTIALVFFPS GNHTVAMLQTFGVFALSFVLRPIGALFWGNFGDKKGRKGALAISIMFMSGASFLIGCLPS YAAIGIFAPALLLLLRMVQGFSASGEYAGAATFLGEYAPTKKRGIYCSLIPASTAIGLLA GSTLATVMTASLSSDALTSWGWRIPFLMAGPLGLIVHFIRTKLADSPVYASMTEALDDKQ QFASTTKSVSPLRELFQNHFKTLVISFGACVLNAVGFYTVLTYLPTYLSDTVGMAAAQSS TITTICLVLYVALVFGMGHISDMFGRKKVLIGACVAFIVLTVPAFMALNTAQFWPVLIVE LAMCATLTANDGTLSSYLTETFPTSVRFTGFAFSFNLANAIFGGTAPFIATWLIYTTGSS IAPAWYMVAVAAVALVAMILSHENTDKDLSRI >gi|222441566|gb|ABXX02000007.1| GENE 13 16214 - 16972 1037 252 aa, chain + ## HITS:1 COG:MK0183 KEGG:ns NR:ns ## COG: MK0183 COG1402 # Protein_GI_number: 20093623 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Methanopyrus kandleri AV19 # 4 245 3 215 224 88 27.0 9e-18 MSSSRRMDHMTWPEIEASKSKPVIVPIGSTEQHSQHLPLGVDAMIASHVSEDLAERIDGI VAPTMNYGYKSKPLSGGGPLFPGTIDMNGVTVINQMHDVLGELIADGFTKIVVMNAHFEN EAFIIEAIDLITRETRGVATIVETNWWDPLPENVVEQVFDGLVFPGWALEHAAVTETSLM MHYEPELVHMDRVIDEGNVTPKAYVRYPVRKGDVPDYGGLATPAGSSAERGKLIVDACID AVADICATEFGE >gi|222441566|gb|ABXX02000007.1| GENE 14 17146 - 18582 2084 478 aa, chain - ## HITS:1 COG:no KEGG:BDP_0783 NR:ns ## KEGG: BDP_0783 # Name: not_defined # Def: DNA repair ATPase # Organism: B.dentium # Pathway: not_defined # 1 478 1 478 478 571 88.0 1e-161 MADENVTASENTNETTEQATTPAVKASKPAVPSPASMKPHAPSPAAFAKKAPQHTAPAAA STGFSDADVKTAEAFGRVADDGTVFVKDGEGEREVGQFPDASKEEALALYARRYLDLKAK LDLFANKLKSNNVKSREIDETIKTLSAETEQPAVVGDLAALKAQFEALKEEGAAKKTALT EARKAAIAKAVEERTAIVEKAEALADSLDENTNWRSTADKFRSLFQQWQEHQRNNVRIDK EDADALWARFSAARTKFNFARRKWVQNRDEERNSAKSTKEAIIAEAEALQDSTAWVETSR KFTELMDRWKKAGRAGRRDDDAMWERFRAAADTFFNARQADRDQISSSEKENLAKKEELL VKAEALVPVKSEEEAKQARQALAAIQEEWDQIGYVPRDEVRRIEGRLDAVDKQIKAIEDA AWKQSDPEADARKSSFEEQLNAQLAELDQKIAAESDPKKKAKLESEKATKEQWLNAIK >gi|222441566|gb|ABXX02000007.1| GENE 15 18699 - 20090 1580 463 aa, chain + ## HITS:1 COG:XF2222 KEGG:ns NR:ns ## COG: XF2222 COG0124 # Protein_GI_number: 15838813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Xylella fastidiosa 9a5c # 1 441 1 444 466 249 38.0 7e-66 MAKGASISGFPEWLPSERVVEQRVIDTLREVFELNGFIGIETRAVEQGSSLLKKGETSKE IYLLSRLQEVGHESDTPIEDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGER PQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALERLREFGLPKATVHANNRKLSE GFYRGLGLTDVEGVLREIDKLDKIGADEVAKLLVEGCGADENQARACLELAELTAADGAE LSGKFDTLCEKHGIANDSEAYVLARQGLDTLAMIVDEAARIRPGSVIADLKIARGLDYYT GSVYETFLDGAAALGSICSGGRYDNLASQGNRKYPGVGLSIGLSRLVSYMLHTAGAHANR VSPASVLVAVWNEEDRSASNQIANQLRARGIAADVAPTAAKLGKQIKYADKLGIPYVWFP ADKSAQDASDEVKNIITGDQQPANAQSWEPDTVYAQQTVTVEA >gi|222441566|gb|ABXX02000007.1| GENE 16 20135 - 21934 2409 599 aa, chain + ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 7 595 3 591 608 730 60.0 0 MSQTAYRTHHATEVTEELVGQKVTLSGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDEDMA RPLRSEFVIQVVGEVRLRPDGNENDHLATGKIEVVAENIEVLAKSDALPFQVSTALENES ENKLPGEEVRLKYRYLDLRRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPE GARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ LDMEMAFVDQEDVMAMAEKVIAAIWKSAGYEIQLPIQRITWQEAMDKYGSDKPDLRFGNP LIELTDYFKNTPFRVFQAPYVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVFAEN GELKGPVAKNLSEEERAGLKEAVGAEDGDAVFFAAGRRTSAQELLGAVRVELADRAGLLK PDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDTFDKDPEHAMS DSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLEAFKYGAPPHAGI ALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPEEDED >gi|222441566|gb|ABXX02000007.1| GENE 17 22093 - 23646 1799 517 aa, chain + ## HITS:1 COG:lin0840_1 KEGG:ns NR:ns ## COG: lin0840_1 COG0834 # Protein_GI_number: 16799914 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 18 280 6 259 268 258 50.0 2e-68 MNLKQSLEKHDFHGVWMRLLALAMILIVAVSALIASPVSANAAEIGDPSAVKGKTYAVGT DTTFAPFEYRENGKMTGIDMELIRAIAQEEGFEVTIQSLGFNAALQALSSNQVDVVIAGM SITDERKATYDFSNPYFQSGIQMAIAENNDSITSYKDLDGKTVVAKTGSEGESYAKQHAS EYGYTVTSVDQSSTMYEMVKSGNADAVFDDYPVLAYGVSQNNGLKIVTPKVPHGEYGMAV NKGKNADLLAAIDDGLNKLIASGEYETIVAQYLGADGAKEQVEAISGKVTDNGADGEAQK KVGFFGLVKQSMPALLTGLKNTLLITLLSFVIALALGVAFGLMKVSENKILRGVSKVYIA VFRGTPILVWAFFFYFGVPQLIGHSVNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSGQM EGARSLGLNHHQAMARVIMPQATAIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQLY AANFRVTETLLIVGVMYFVAITILTWLANIVDRKVNR >gi|222441566|gb|ABXX02000007.1| GENE 18 23643 - 24407 541 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 15 253 1 242 245 213 45 4e-54 MSENCNHGNNDGEVIIDVKNLHKNYGHMEVIKGVDLTVRKGEVICIIGPSGAGKSTMLRC LNGLEQASSGQIVVNGHDLGDPHVNIDQVREQVGMVFQHFNLFNNMSVIDNITLAPKLVH KETDEQAREHAMALLKTVGLAEKADVMPRSLSGGQKQRVAIARSLAMRPKVMLFDEATSA LDPEMVGDVLEVIRELAEDGMTMVLVTHEMGFAREVATRVIFTDAGVIEEEGTPDEIFNH PKSERLKTFLSKVL >gi|222441566|gb|ABXX02000007.1| GENE 19 24859 - 25656 257 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 39 239 20 221 223 103 31 3e-21 MTDIKETQETRPIMPGTEDSDRPLVELTHVEKHYGDLHVLKDINLTVKKGEVLVIVGPSG SGKSTMCRTINRLETIDSGDIRIDGKPLPQEGKELASLRAEVGMVFQSFNLFANKTILEN VTLAPIKVRHMDKKAAEDLAMDLLSRVGVASQASKMPSQLSGGQQQRVAIARALAMQPKV MLFDEPTSALDPEMVNEVLDVMVELAHEGMTMLCVTHEMGFARKVADKVVFMSDGQILEQ STPEDFFENPKTDRAKDFLSKILTH >gi|222441566|gb|ABXX02000007.1| GENE 20 25696 - 26535 1063 279 aa, chain + ## HITS:1 COG:Cgl1906 KEGG:ns NR:ns ## COG: Cgl1906 COG0834 # Protein_GI_number: 19553156 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 5 257 1 273 295 194 44.0 1e-49 MRLSMRAKRMLRRVIATFCACACVFAVSACGADDADGKIRVGIKFDQPGLGFKKSGTYVG FDVDVAKYIAKKLGYSEDQIVWKEAPSKQREAMLQNGDVDFIVATYSITDERKKVVSFAG PYFVAGQDLLVRKDETSINGPEDLNGKRLCSVTGSTSAVTVKEKFANEVQLMEQPGYAEC ATALFSGIVDAVTTDDIILAGLASASRGRLRVVGKPFTQEYYGVGIKKGDTKLATQINNA IADMIQDGSWQRAISDNTKGTAYTPNAKYNPPEPTEGER >gi|222441566|gb|ABXX02000007.1| GENE 21 26535 - 27212 915 225 aa, chain + ## HITS:1 COG:Cgl1907 KEGG:ns NR:ns ## COG: Cgl1907 COG0765 # Protein_GI_number: 19553157 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 16 225 15 228 228 157 47.0 1e-38 MEAFISLFSQYNVPAAFLVNIELTLWSALFSTILGVILVMMRISPVASLRMVSGAYVELF KNLPLTIIMVFMVLGAYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVP LGQAEACRALGLNFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSL MSEMIEYRSDVIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR >gi|222441566|gb|ABXX02000007.1| GENE 22 27219 - 28361 1295 380 aa, chain + ## HITS:1 COG:Cgl1908 KEGG:ns NR:ns ## COG: Cgl1908 COG0765 # Protein_GI_number: 19553158 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 6 295 7 300 315 186 36.0 1e-46 MASDESAVLFDQPGPKTRKTIRIVNWIAGIVFAIVVVLILMRLHNPPDGENQLSWELWKP ALDAEAWTDFYLPGLWATIRASVLAVIGAVLFGLIFGIGRLLPNIVIRAVSGAIVEFARA VPVLLLMIFFWRWFAFAGMSSPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLA LGLTRTQSLMEIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFN ILQTLVVAAVIYFIACWLLSRLAEWLPERMQKHTAAPAEPEPVAPIAIMDPSNVNQIAVA REGVPLGGAQRLYHVHHRGSNASIRHWRQTRYVQGFDETHPESQVEFDKNGRPIKDTSKQ DKLRFDKPKSDKSKGDKPKQ >gi|222441566|gb|ABXX02000007.1| GENE 23 28546 - 29532 897 328 aa, chain + ## HITS:1 COG:all2088 KEGG:ns NR:ns ## COG: all2088 COG2326 # Protein_GI_number: 17229580 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 73 312 19 268 289 206 42.0 3e-53 MSDKDKDAKTSSIAKTLNKVEDRLEKGENCSSVAEGLANVAKASELLSSVWTLPPSQLLR FHHDTRVAAIDGDSTPGFDGNKDDAERFIAISSSEIARYQRLMYANGVKGSRRRLLIILQ GMDASGKGGIVRHVFSQGDPMGMHYHGFGAPKGEEKDHDYLWRIKRELPQNGWISIFDRS HYEDIVMPRIYKTYPEEVWQARYDEINRFESQLVADGCSIIKIFLVVSKEEQKEHFLGRL EDPTKYWKFDPSDLEARARWNDYMAAWQDVFARTSTEQAPWYLVPADNRWYSRAVVSELL RNVLKNMNMIWPPLEVDADEMRRQLETL >gi|222441566|gb|ABXX02000007.1| GENE 24 29514 - 32096 2808 860 aa, chain - ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 17 860 6 849 850 768 47.0 0 MPAARLAIMADDTNYGSLGALAPNWSDGERNIDTDEIYERFFEWVADVKGVEPWPHQEEA IMDLLAGDHVILNTPTGSGKSLVALGMHFAALCTGRRSYYTAPIKALVSEKFFDLVEVFG RENVGMITGDTHINADAPIICCTAEILANQALREGRHADVGCVAMDEFHYYGDSERGWAW QVPLLTLPNTQFLLMSATLGNVDAIADKLEDMTDTDVDIIADAPRPVPLTYEYTLDPLEK TVELAFGRGETPIYVVHFSQDAALETANALASTGVSSKEQRAAIAEAIKGTKFTTAFGKI LQRLLRTGVGIHHAGMLPRYRRLVEQLAQQGLLPVICGTDTLGVGINVPIHSVVLTALTK FDGTKMRKLRAREFHQIAGRAGRMGFDTEGLVIAEGPEFEIENAKALAKAGNDPKKLKKV KRKKAPEGFVTWNENTFDKLIDADPETLVPHMKVTHSMVLNEVAQGGDARYRIDRLIDDS AQTPEQKERLHDRADEIFQTLFDTNVIETEDRDDGGKDYFMTVDMPDDFALDQPLSPFLL AALELLDPESESYALDVISMVEATLEDPKQVLRAQERQARDAAMIRMKEDGLDYDERMDR LQEITYPKPLEDMLQAAFDEYRHDVPWANDYWLSPKSVIRDMVETASDFTGYIARYNIAR SEGTLLRYLSDAYRALARTVPLEKRNEQLRDIISWLRVVVRSIDSSLVDEWENAGAGTDA SEAAANLAAPGAKQAVVEDRRGLTVLVRNAMFRRVQLMDLDKPDELGALDKDWGYGVHEW EDALDDFYDEHEYVNTDAKARSGELFILDDSKENSEHSWKVRQIIDDSDGDHDWAITGTV DLDTTQSSGEVVFFDYSVSN >gi|222441566|gb|ABXX02000007.1| GENE 25 32156 - 33532 1298 458 aa, chain + ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 18 455 52 473 473 424 53.0 1e-118 MTEDLFGAMDAPEDMTRPLAVRMRPSSVDEVVGQSRVLGQGSPLRRLANPASKGSLTAPS SIILFGPPGVGKTTLAYIVAKQSGRVFEELSAVTSGVKDVRDVLRRAHDRLVAEGKETVL FIDEVHRFSKSQQDALLPSVENRDVTFIAATTENPSFSIIKPLLSRSVVVKLESLEPDDL KTLIKRAIESERGLKNEVKINDEAVDEIVRMAGGDARKTLTILEAAAGALTGDQARKKGT KRPIITPDVVSQVMDVATVRYDKDGDDHYDVISAFIKSMRGSDPDATMHYLARMLRAGED PRFIARRIMIAASEEVGMAAPQILQVTVAAAQAVSMIGMPEARIILAEAALAVATAPKSN ASYNAINSALADVDAGLIGQVPLHLRNAPTALMKSWGNHEGYRYAHDWPGAVAPQQYMPD ELAGREYYHPNDRGYEHEIKPRLEKIRKILHEKNGDRG >gi|222441566|gb|ABXX02000007.1| GENE 26 33672 - 34406 532 244 aa, chain + ## HITS:1 COG:Cgl0731 KEGG:ns NR:ns ## COG: Cgl0731 COG0745 # Protein_GI_number: 19551981 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 13 238 5 221 226 236 56.0 3e-62 MRNMQDESNQRLIMIVDDDQALGEMLSIVLESEGFKTVTCLDGWRAVEMFPTLQPDLMLL DVMLPGLDGVQVAQRIRQNSNTPIIMLTAKSDTTDVVKGLEAGADDYVSKPFEVVELMAR IRARLRMPKVNAPAGKDEGDLTERLQCGTLVMDRAEHTATKDGVDLQLTPTEFELLYVLA AHAGEALSRANLLKRVWGYESGGDTRLVNVHVQRLRMKVETDPENPRIVQTVRGIGYKFV APTV >gi|222441566|gb|ABXX02000007.1| GENE 27 34414 - 36090 917 558 aa, chain + ## HITS:1 COG:ML0774 KEGG:ns NR:ns ## COG: ML0774 COG0642 # Protein_GI_number: 15827335 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 20 508 35 516 562 278 35.0 2e-74 MLMRTHRVWCIWHRDRQQVRRSLQARTVAVSMLVVLLTAALLSLFSMYVIRGSVLEQATD DSRSDFSSQIVRVQKHLNASNLTGTDQYQQLVSNLASELQSNGSSNLVGVYLMERDAADS AERGFVPVSTEPEYSNLVSSSMRNRMRADTSGLIYYQPVRIPRTSGGTPGAVLGSVISSN NMGSLEVFALYSYQSQQQALSQIQINMLMVCVALSVLIGMIIFLVMRSVITPVRRVALAT EIMASGTFDARVAVDRADEIGVLQKSFNEMAESLENQIEELEKAGDMQRSFVSDVSHELR TPVTTMRMAADMLSMHKDEYDATTKRTVELLDGQIRRFQEMLADLLEISRFDAGYAALDL VEADIREPIEQSVEAISAIAQTKHVPLDVHMPNVEVLVRIDTRRISRVVRNLLANAIDFA EGKPVEVRLAANQRMVVISVRDYGVGMTSEQCSRMFDRFWRADPSRARTTGGTGLGMSIV LADTKLHHGDVAVRSRLGEGTWFLVTLPRNPDDVDCGMNNAPIRFATDGDDMRVVGGFGV ADNGFVDYLTNKPMVEGL >gi|222441566|gb|ABXX02000007.1| GENE 28 36090 - 37829 1115 579 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_1417 NR:ns ## KEGG: BLLJ_1417 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 8 579 3 573 573 489 46.0 1e-136 MTAKNIRRVIAAVSLVVLLGCSMMHLAGCSSILGLPEDGPVQTMTPEEQSTRRVFTSPDG PADDAQPEAIVKGFFDVMPAGVQSDGFATGKQFLTDGAASRWNADNRTTVYADVPKFVRK ASTVESGQGGQKTVVSVSLQIQGELDAHGVYTAVASGGAKTYDFSLSKVRGQWRISKLPT GVMISSYDFEQVYRQVSLYQLGSSEKELIPDVRWLCWRDWRTRAVQELLAGNAAWLEGAV SDTNTKRIVLQPDGVQMRDSVMEMSLSSAMERMTDAERGILVRQIRLSLGDGSAETEIKV MSGNHDYSHADDSSSLDAQTPLNPMYTLSVGNIVSLKSYSAIRVAQTDLSDVRSFVFSAQ GGAVLGRDGYVKRLAEDGSTHALMFSGRMMKTICKGNDSEIWGIDTSGKHIMVDDAGTVL TLDVPGLVSAQTLHSMRLSPEGDRIAFSIESDGGAQSGVAIIGICRDHDGSVAGLSQAFA LVSTQSNVSMMTFYNDVTFLYATQYERGRAQIGRRQMVPGPETSQALPDNGAVDMATGEV GTYRRLVVLDHLGVARTVDGSLDGAWTIADSQVTSLSVQ >gi|222441566|gb|ABXX02000007.1| GENE 29 37985 - 38977 1517 330 aa, chain + ## HITS:1 COG:ytfQ KEGG:ns NR:ns ## COG: ytfQ COG1879 # Protein_GI_number: 16132049 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 41 324 25 311 318 124 32.0 3e-28 MKNWKKAIAICASAAAMASMAACGGGSSNGDSSSSKSDKKTIGFVAVGPEGGFRTANEND LKKAFEDAGFDLVYSPTQNNDQQKQIQAFNKFVNDEVDAIVLSATNDSGWDDCLENAAEA EIPVFTVDRNIDIKSDAAKKAVVSHIGPSNVWAGEQAAEFVNKSFPDGANGFILEGPAGL SVVTDRGTGWDNKAASNIKVLESQSANWSTDEAKTVTAGLLDKYKSDNPQFIFAQNDEMG LGAAQAVDAAGLKGKVKIITIDGTKAALQSLVDGDLSYVIEYNPIFGKETANAVKDYLDG KSVESDIEIESKTFDADSAKEALDAGTRAY >gi|222441566|gb|ABXX02000007.1| GENE 30 39115 - 40656 2049 513 aa, chain + ## HITS:1 COG:SMb21588 KEGG:ns NR:ns ## COG: SMb21588 COG1129 # Protein_GI_number: 16264776 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 17 513 18 504 505 459 49.0 1e-129 MVDKQPIVVMKGITIEFPGVKALDGVDLRLYPGEVHALMGENGAGKSTMIKALTGVYRIN AGSIEVEGKPQTFTGTGDAQNAGIATVYQEVNLCTNLSIGENVMLGHEVRGTLGINWKKT YEESKKFLAQMGLDHLDPRAPLSSISIAMQQLVAIARAMVIDAKVLILDEPTSSLDANEV QDLFKIMRKIRDSGVAILFVSHFLDQIYEITDRLTVLRNGKFIKEVMTKDTPRDELIGMM IGKSADELSQIGAKKAHRDVTEGEQPIVSVKQLGLKGTINPTDLDIYPGQVVGFAGLLGS GRTELGRLLYGADKPDSGTYELKGKKTSISDPYTALRNKIAYSTENRRDEGIIGDLTVRE NILIALQATRGMFKPIPKKEADEIVDKYMKELNVRPNDPNKLIKNLSGGNQQKVLIARWL ATHPDLLILDEPTRGIDIGAKAEIQQVVLDLAAQGMGVVFISSEMEEVVRLSDDIEVLKD RHKIAELVNDNTVSQETIVQTIANTNVNTGKEA >gi|222441566|gb|ABXX02000007.1| GENE 31 40656 - 41729 1456 357 aa, chain + ## HITS:1 COG:AGl3181 KEGG:ns NR:ns ## COG: AGl3181 COG1172 # Protein_GI_number: 15891708 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 22 335 12 319 348 168 38.0 1e-41 MSDKKTKQDGDSLVKKLLSSNLTWSVVALIVLIVICTISDHQFLSLSWNKNTGGLSGPLI TMLQESARYLMIATGMTLVISTAGIDLSVGSVMAVAGAAAMQMLTSGVNVWLAIFLALLI GLGVGCINGALVSILGLQPFITTLIMMLAGRGLAKVITSGQNTDASSVAGGAPLKWMANG FILGIPANFVIALVIVALIGLLCRKTAMGMMVESVGINPEASRMTGIKPKKILFLVYAIS GLLAAVAGLFATASVMRVDVVKTGQDLEMYAILAVVIGGTSLLGGKFSLAGSALGAVIIA MIRKTIITLGIDSAATPAFFAVVVIVICVMQAPKIHNLGAEIKRKCALKTQTKAVAA >gi|222441566|gb|ABXX02000007.1| GENE 32 41726 - 42751 1382 341 aa, chain + ## HITS:1 COG:YPO3905 KEGG:ns NR:ns ## COG: YPO3905 COG1172 # Protein_GI_number: 16124037 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 25 337 6 314 330 165 36.0 1e-40 MTSATATQVKKTVKPTRRRLDAQMIPTIAAVVIFILMIIMGQALFGTYLRLGFVSSLFID HAYLIILAVAMTLPVLTGGIDLSVGAIVAITAVVGVKLTNAGVAAPLAMVVMILIGVAFG LLTGTLIEEFNMQPFIASLASMFLARGIASIISTKAQTFPENNNFDFISQKITIIDNPKI SQDLYINVGVIIAALVVIFGYILLHHTRTGRTIYAIGGSRSSAELMGLPVKRTQYVIYLT SATLASIASIVYTANIRSSINTVGVGWELDAVASVVIGGTIVTGGFGYVLGSVIGALVRS TIDPLTSDFGVPAEWTTIVVGLMILIFVVLQRAVTAFNKKE >gi|222441566|gb|ABXX02000007.1| GENE 33 42952 - 44505 1588 517 aa, chain + ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 38 483 9 427 454 221 36.0 2e-57 MEERNITTTTAATESQAITTNAGTQEAAISDERIPGKLIGAIVAVGSLAFIGILTETVMT VLFPQLMREFNVDTATVQWITTIYLLVVAATMPLSSYLNRRFKHRTLFLAAVALAVLGSL IMIVGHAFPVILIARVIQGMGSGVATPLMINIILEQSPKSKVGRLMGVGSLVITVAPAIG PTVGGAVSSILPWRAIFVIVIPIILLVSLPVGLKCVEQHRPTEEARLNSLQFVSIVLALC GLVMFLNQAGVAVSAAVSGGSATVSGGSATVSAVFAVVSLIVGLGALLFFGWSSKRSFSP LIRLGWLRDPMVLLHLIAYMLLPIVGIGFGYVITNVAQLSLGTSAFLSGALVLPGALIGA FFAPVGGMLYDRFGPVRPILGAFFAAICGPILLLVFSMRLTPVTLAGFYFIFGFGYSLGF SNIMTNALRNIAPQFMPDGNAVFNTCLQFGGAAGTALFSTILSVAQAGAGEEGGATFRHA TAVGGSWTFATMIGIVAIAICCLIAAFRIGAKRNSRL >gi|222441566|gb|ABXX02000007.1| GENE 34 44596 - 46254 2048 552 aa, chain + ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 50 552 44 533 534 387 42.0 1e-107 MRLQHPYSGITTGLLKPITAALSIVALLAGCGSVEAKDSQQEVTSADKVVSVNITEPSNG LLPSDTSDMAGWKIVSQLYDGLVTFDAEGNETLVEAESITPNDDASEYTIALKPNLAFSN GEKITADTYAKSWSFAANAANGQVGASIFEDIQGYDELQDASGSKTAQLSGLTVVDDTTL KVKLKASNSAFLYKIGDIAFLPMPSEVIKNPKEYGQKPIGNGPYKLKAYKSGEEIILEKD DSYKGPREVKNAGIDFKVYQSLDAAYSDLLADNLDVLDAIPTSALKTYQNEKNITAVSKP GPSFSAFTISQNLKHFQGEEGKYRRQAIAHAIDRENIANAIFGGTVTPATDFLAPVIKGY DTDLDTDGVLAYDETKAEELWAKADAISPWSGTFRIAYSADGTDKEWVEAAANSIRNALG IDAESYPFATSKELRSAIQERTIDAAFKSGMQSDYPHPEGYLVQAYDSSAADGKGLNNGD YKSDEFDALIDQAAAETDLDKAVSLYRQSERVLLKDLPVIPLWYTNVTAASAKNVEVSYN YMGVPEYNTIVK >gi|222441566|gb|ABXX02000007.1| GENE 35 46359 - 46979 877 206 aa, chain + ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 11 195 6 189 197 226 58.0 2e-59 MSNLSAPLPVMAGEDMPAGPADPIFNRLLKDRIIWMGEEVKDEMANRICAQMLMLAAEDP KKDIWLYINSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTS HARVLMHQPSGGIGGTATDVRINAELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFT AQEALEYGFVDKLVSTHDTMNATKGE >gi|222441566|gb|ABXX02000007.1| GENE 36 46982 - 47683 928 233 aa, chain + ## HITS:1 COG:MT2535 KEGG:ns NR:ns ## COG: MT2535 COG0740 # Protein_GI_number: 15841984 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Mycobacterium tuberculosis CDC1551 # 29 232 3 207 214 241 62.0 1e-63 MASEESRFVARAERLAGPTGVVGFQAAAAREAAFAPQNRYVLPQFEEKTPYGFKRQDPYT RLFEDRIIFMGVQVDDTSADDIMAQLLVLESQDPNRDVMMYINSPGGSMTAMTAIYDTMQ YIKPDVQTVCLGQAASAAAILLAAGAKGKRLMLPNARVLIHQPAIDQGFGKATEIEIQAK EMLRMREWLENTLAKHTGRDVEKIRKDIEVDTFLTAPEAKEYGIVDEVLEHRS >gi|222441566|gb|ABXX02000007.1| GENE 37 47829 - 49142 267 437 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 187 435 267 459 466 107 33 2e-22 MGRVVSYNDEVSRCTFCGKTENQVRKLVTGSGAAICDECIELCVDIISEERVKDAQLNTL QLPKPAQISAYLDNYVVGQESAKRTLSVAVYNHYKRVNMEMRESAALRDRAAHASDDPLA GVQVSKSNILLLGPTGVGKTYLAQTLAKVMNVPFVIADATTLTEAGYVGDDVETVLQRLI QAADGDVARAQQGIVYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTVASVPVE GSRKHREMETVQIDTRDILFICGGAFVGLADIVAQRLGARESGFGAAWHDHEVPNRELLA QASADDLADFGLLPEFIGRLPVVSVLEELTEDDLARILVAPENALVKQYQKLFAIDGVTL TFTEGAVRQIAATSIRRGTGARGLRSIIEKTLEDTMFQLPSVTGVSEVVVDEASVNGSGT PKLLKVSTEEIPRRRAA >gi|222441566|gb|ABXX02000007.1| GENE 38 49860 - 51230 1436 456 aa, chain + ## HITS:1 COG:HI0225 KEGG:ns NR:ns ## COG: HI0225 COG3004 # Protein_GI_number: 16272188 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Haemophilus influenzae # 23 409 28 398 400 205 33.0 2e-52 MTERKQGLWAKIRYIAASDRISGLIMLGFALAGLLLANLPFTAHAFEELENFRIAIPYTN IDMGLGHWVQDGLLTVFFLTVGLELKQELATGSLSNPKAAAVPMLCAVGGMMAPPVLFLL VLFLFSGFGSDPLAIASGTSFTFGEMSHGWAVPTATDIAFSLAVLALFAKALPGSIRAFL MTLATVDDLLAIILIAVFFSSVNAWYWFVGIAVCAVVWYFLVRMRKVPWLAVAIVGILAW VMMFEAGVHPTLAGVLVGLLTPAHERFGEKTPRAERYADKLQPFSALLALPIFALFATGV HFESLTLALFISPVVVAVMVALVVGKPLGIMITAWLSTHVAGLKMAKGLRVRDMFPAACA CGIGFTVSFLISSLAYQDAELSAEARFGVLVGSIVAAVISGILLSRQSKKFELAAAASSK HKHHTADEDAAGEVESVLEDGTVVVSQMIDTHPKVK >gi|222441566|gb|ABXX02000007.1| GENE 39 51354 - 52025 688 223 aa, chain - ## HITS:1 COG:ML1075 KEGG:ns NR:ns ## COG: ML1075 COG4122 # Protein_GI_number: 15827525 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mycobacterium leprae # 28 222 36 223 224 76 31.0 5e-14 MDRTSYTNLAKSWEYVEDHAFSRQSTDLNAIRTHAEEAGIPQGSAAQAELLRMLVHMVNA TSVIAVGTGSVVETLQLVNGLDNSGQLTAVDSSSQGIALIRTLFNRLSDETQTTLRAVNA PVDVFLPRLNAENYDLIVVAGDAENYGASFEQAPRLLKKHGVIVFTDILAFDSATSAGGV LNPANRDAKSIAMRGLLETVESDERFVTALTPTGTGLLVAVKR >gi|222441566|gb|ABXX02000007.1| GENE 40 52030 - 52959 969 309 aa, chain - ## HITS:1 COG:MT3420 KEGG:ns NR:ns ## COG: MT3420 COG0479 # Protein_GI_number: 15842911 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Mycobacterium tuberculosis CDC1551 # 60 302 46 255 263 150 33.0 2e-36 MSGMENGVNTVTLRVNRFAPRAERARDRERGGSPFARKSSPFGDSGTSARRRPRGKQWLQ DYTLNVRPEDTVLDCLLKIKRTIDPTLAFRYSCGHGMCGSDAVSINGTPTLLCTASVKDW AKPSNPTLVDDEGFRHTGDVSDIQENAVGAGDLGVIELAPLPGFPVQRDLIADIDQMLNQ IRKLKPYLQARGELATTADGKINAFEYLQNPQQLAKYELLSNCIACGTCEGSCPVYAGGE AFIGPAALIAASRFINDSRDGQANARMDAIDSADGIAACQSVRACTRECPRGIDVGEEIW QLIAQVKER >gi|222441566|gb|ABXX02000007.1| GENE 41 53018 - 54940 1805 640 aa, chain - ## HITS:1 COG:ML0697 KEGG:ns NR:ns ## COG: ML0697 COG1053 # Protein_GI_number: 15827293 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Mycobacterium leprae # 61 640 24 584 584 475 45.0 1e-133 MQRQTRQPANRNEVTPCAKIVAMSPKHVEDMYDAVIVGAGAAGLSAALGMLRSEQMQALK EAGIEPNILVISKLQPLRSHTGSAEGGIAASLGNVEKDDWHWHYFDTVKGGDWLVDQDAA ELLAKEASETVIDLEHDGVAFSRTEDGHIAQRRFGGHTKDFGKEPVRRAAYAADRIGHQI LFSLWQQCVAEGVEFAEEWYVTDLVITEDGSKVEGVVAFDTHKGQTHAIHARNVLLATGG AGRLFHTTSNSWDLTGDGMALALQAGLQLEDSEFVQFHPTGLAHTGILLSEAARAEGGVL RNADGEAFMEKYAPGHADLAARDVVSRSIMAEIDAGHGVADPKDPEGPKDCVWLDMTGID ADHMHEVLPQVVETIEKYADLDPTHDFVPVKPTAHYTMGGIPITTDGEVYRWQNDERNVV EGLFAAGECACVSVHGANRLGGNSLLDACLFGTRSGKALAERISSAPVNDPMAESDADNG SDAVQQAADTRSNELKDLLVQLPEDEEHAADNPYQLMADLGTVMERAVAVRCDEQGIEQA LTALHDEFAPRAEALHAHSDSPTFNQEITAIWEVRHLLELGKAVLTSSDARHESRGSLKR LDFPERDDEHFLAHSMVNASGQISWQPVHIVNMPPKAREY >gi|222441566|gb|ABXX02000007.1| GENE 42 55027 - 56397 689 456 aa, chain - ## HITS:1 COG:VC0048 KEGG:ns NR:ns ## COG: VC0048 COG0758 # Protein_GI_number: 15640080 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Vibrio cholerae # 107 353 56 285 371 139 38.0 1e-32 MNENTTADTSVNATAIDDETLSRAVLTYCLDSADAMMYALVKGIGSATHTLQLLADSGPG NHESVATAAYKTLDAALINGITRWGRTINARGMASFHGAMVSWQHRLTTLPSTDPEELKT WFTANGTQWIVAPHHPYWPSQLADLTIHTDWAAPLCLWGKGDPQALVSCSEPVGVVGSRG VSEYGRQSAHELAKQAARAGHLIVSGGALGTDAAAHWGAIQAMDEIGTPLAGRTVAVFAG GLNYIGPKSNERLFETIINHSGALISELCPGTVPEARRFLIRNRLIAALSSTLIVAQARA RSGALNTAGWANELNRRVFAVPGDVTMPHNTGCNRLIQEGQASIICSLTDIDEFCHAAHR PQSADAADNDDEPSEESTDTSLSQPTNATAAILKAIRTCSAKYGHVSTDGLLAILAESNP GEYSISRISMELGLMELNGLICTQHGNITITDASAT >gi|222441566|gb|ABXX02000007.1| GENE 43 56394 - 57923 931 509 aa, chain - ## HITS:1 COG:Rv2897c KEGG:ns NR:ns ## COG: Rv2897c COG0606 # Protein_GI_number: 15610034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Mycobacterium tuberculosis H37Rv # 1 505 1 497 503 408 44.0 1e-113 MAIGSALSVGLIGLKAFIIQIQAFVSPGLPYFSIIGLPDTSLSEARERVKSACQASGAKW PETRVTVNLSPASMPKRGSSHDLAIAASVLSASGTIPHDCLNDTVVLGEVNLDGTVLPIN GLLPILLHARDQGVCKVIVPHANLDEAALVPDVDAIGIRHVGELIELMGGTANYTIPDMI RDVDANDGAMSVCPPPGDMNEVMGQETAKWALEVAAAGGHHLMMTGPPGTGKTMLASRIP GIMSPLSESEQLEVASIRSLCGTLPSYGISDVPPFEAPHHTASTASLVGGGAGLAQPGAI TRAHRGILFMDEAPEFSARTLQTLREPLESGYVAISRAKGTTYYPARFQLIMAANPCPCG YAYGNGERCTCREKDRIKYFSRLSGPILDRIDIQIEVPPVERINPGTVPSGESSHAIRLR VMVARQTAQERFREFGWVCNAQATGTWLRANTSTKAIELVNHALASERLSLRGADRAMRL AWTLSDLSGKTSPGPEEMMQGISMRTRLT >gi|222441566|gb|ABXX02000007.1| GENE 44 57923 - 58375 317 150 aa, chain - ## HITS:1 COG:MT2966 KEGG:ns NR:ns ## COG: MT2966 COG0792 # Protein_GI_number: 15842441 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis CDC1551 # 31 148 19 139 141 78 42.0 5e-15 MNGNTTHNVPNATQRSEQLLDSIARRLHDGTLCARQVGELGEQYAAAWLEGQGWQTLDRN WHCRYGELDIVSRDDTGIIVFVEVKTRRTLRYGTPQEAVTSSKQINLRHAAVQWLSDSDH RTPHNGVRFDVVTVIVRDGKPLVHHIEGAF >gi|222441566|gb|ABXX02000007.1| GENE 45 58548 - 59423 874 291 aa, chain - ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 12 285 3 278 290 171 33.0 2e-42 MNDVILFDRDPRYIPRVAAVHDMCGYGKCSLTAAIPILSAAGCDVCPVPTALFSAHTRYS VFTFHDTTEILDGYLDAWRKENVDLDGVYSGFLGSAEQVAIIKRLYADYPHALRLVDPVM GDGGEIYATYTPELCEAMGTLVDGADVLMPNLTEASMLTGRTYPGQNIDNAEVNGIIDAL LALGAKNVVLKGVDRQDGIIRNYVASATSGASGKQEIAHDKLPFMTHGTGDAFASALCGA VMAGRPLAESAHIAGEFVRHAMESTQFQPNHTERGVSFELNLDELTRLVRR >gi|222441566|gb|ABXX02000007.1| GENE 46 59753 - 61066 1910 437 aa, chain + ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 6 424 5 420 426 489 59.0 1e-138 MADSKNYRFETLQLHVGQEQADPATDSRAVPIYQTTSYVFHNFDHAEARFGLADPGNIYG RLTNSTQGVFEDRIAALEGGAAGLAVASGAAAVEYAVRNITQSGDHIVAAKNIYGGTFNL LRHTLPRDGITTTFVSAENPQEFEDAIQENTKLVYFETFGNPNADLPDFEAITAIAHKHH LPVIVDNTFATPYLFRPLEHGADVVVESATKFIGGHGTTLGGVIVEGGNFNWAEVPGKFP TLTEPDPSYHGLNFYEALGGSAFVTRIRAILLRDTGATLSPFSAFLLLQGTETLSLRVER HVENALKVIDYLKTVPEVESISHPSIEGRKDNELYKKYFPNGGGSIFTFDIKGGKDAARV FIDNLHLFSLLANVADAKSLVIHPASTTHSQETPEELEDQGIHQGTIRLSIGTENIEDIL DDLKGGFAALRESGLAK >gi|222441566|gb|ABXX02000007.1| GENE 47 61333 - 61884 903 183 aa, chain + ## HITS:1 COG:PH1832 KEGG:ns NR:ns ## COG: PH1832 COG4720 # Protein_GI_number: 14591582 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 17 177 43 198 202 93 38.0 2e-19 MAQEVKNDIKKALQVNTIPLIAIMTAVTTVLTMLVKIPTPIRGYLNLSDTMIYFSAYAFG PWVGGIIGGLGPALSDLISGYPQWAIFTFVIDGLQAVLVGLLVKKFNPANIIIGSVIAGV WKVFGYFIAGGILSGFGPALGEIAGNSFQMAVGLIVGFALFTAVRQAYPPLVRLGNLGIK AGE >gi|222441566|gb|ABXX02000007.1| GENE 48 62007 - 63614 1710 535 aa, chain + ## HITS:1 COG:MA1418 KEGG:ns NR:ns ## COG: MA1418 COG1122 # Protein_GI_number: 20090278 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 1 534 1 515 528 285 33.0 2e-76 MITVRDLGWKYAPLTDGGKPVESLKRVSFDIRSGSFVGIIGPTGAGKSTLCMALAGIIPN LADGTMSGVVEVNGMNTSRHSVSALSERVGYVQQDPEAQLFCSSVEDEIAFPLENRGVAP SIIDKQIDIMLDLVGMAGYRKRVPTSLSGGQMQRVAIAAALAAEPDVLILDEPTAALDPE GKQEVFDVLDRIRQTRSMTVIMAEQDTEHIAYWADQVLFMVNGEVVRNGDASLFTRERRL LESSGVRVSDGPSPVIKALPVGNDAKPKHAIISLDHVTHRYGQGGNASPALDDVSLDIEQ GAFVGLIGRNGSGKTTLAKHLNGLIQPTQGIVNVDGLDVSKHSVGEMAAHVGFVFQNPDH QIFCSSTKEEIAFGPTALGLDAATVFKRVDEMMTLFDLHRYEDVSPATLGYGERRAVALS SVIAMRTPILVLDEPTAGLDHRLASRFLGTVEKLNRHGVTVIMISHDMRAVYRYCTHVLE LEDGHIVQYGPIDKSQEAQQSPARQARQPYKSRGPVSATHVLLKIAKDECDKEER >gi|222441566|gb|ABXX02000007.1| GENE 49 63614 - 64432 940 272 aa, chain + ## HITS:1 COG:PH0131 KEGG:ns NR:ns ## COG: PH0131 COG0619 # Protein_GI_number: 14590075 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Pyrococcus horikoshii # 1 261 1 234 249 97 28.0 2e-20 MDADLYVPGDGWLHRTDPRVKFLISIVMLALCLVWRNWAFILGILILEHVMLATDRVPAE RIGWVWKILAVLIVFIVVLWPVFDQSGTHVLWQWGWLRLTQENLLMAAVMGLRIPALGFA CFITLFTTSQTKLVRGLTSLGMPYKAGLTLATALRYIPVFFSIFQSVSEAQRARGLDLSG KVNAAGKKRNIFVRLVDRFKSYLPIIIAVLIRAYKMSQSVGWAMESRGLNLNRNGVKRTY RVNLTMSIADWIILVIAIAAAAGSVWLMTWLS >gi|222441566|gb|ABXX02000007.1| GENE 50 64441 - 65460 953 339 aa, chain + ## HITS:1 COG:no KEGG:BAD_0602 NR:ns ## KEGG: BAD_0602 # Name: not_defined # Def: regulatory proteins # Organism: B.adolescentis # Pathway: not_defined # 1 339 1 339 339 612 88.0 1e-174 MTQDEGRTTITARDLKVVSALQCNGRMTMQALADKIGISVYAATESYKRLTDAGIMTIVP VCNPLSLGNYSQVLVGLRINGNRNEALAMLKAMPQVTYVVCTLGDADIIAEAVVYSADGM DHFLKYDLRALPGLTRLQVFSCGRLVLDDHNVSVVNRLLAERGETGFMTKREASVGTDIP VHRLDARFVHTFNELQKDGRASYAMLGEHLGVTHTAIRGRVKKLEDSGVMRIMATVSPMR LGGFRQAFLGIGVKPPYRLDVEQLLAIDEVTYAMSGVGLNGADYLIEIIAGDDEDLWRVV DESIRSLPGVDQTWWASTVSVEKESYWLEPPQDGVLLDD >gi|222441566|gb|ABXX02000007.1| GENE 51 65593 - 66384 815 263 aa, chain + ## HITS:1 COG:Cgl2501 KEGG:ns NR:ns ## COG: Cgl2501 COG1136 # Protein_GI_number: 19553751 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Corynebacterium glutamicum # 13 241 45 273 284 262 58.0 5e-70 MDIRDTIKATNTAIATVDLVKDYGSGNNTVHALRGVNVAFEKGKFTAIMGPSGSGKSTLM HTLAGLDCATGGHIIFNGDDLTRMNDNQLTLLRRRDIGFIFQSFNLLPMFTAEQNILMPL TLAGAKPDRQWLRLLVETLGLKERLNHRPNELSGGQQQRVAIARALITKPKLVFADEPTG NLDSVSSAEVLSFLKRSVNELGQTIIMVTHDAVAASYADRALVFADGQIVADVNKPTADQ MSELLMKEREAATMNVASARHSR >gi|222441566|gb|ABXX02000007.1| GENE 52 66426 - 69068 2717 880 aa, chain + ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 1 879 7 853 853 216 24.0 2e-55 MWSITLKLMRKTKRMLIPAGIAIMIGTAFIASTFLFGNAMNDSLTRQLTAMFGNANYAVT VNSSDLSDKELNEAYSSTVGDFHLDQIAGIEGVGGVRASVETGVSVSKGDSTVSGEIIST AAQKNMLPVNITEGDQPKDSNEVALPEDMAKQLNVGVGDTVSLTSRYAVGDDGKAKADNV RVVGLTSDPNGAYSYYGGAIVGSNNLLAAMQGVDDFNATGTTMVYLDLALDGNSVSAKTI NGVKALLPKHFDLMSRQQISDESIKSLSGNQTNIVTTFLMCFGVLAMFVAALVIANTFQV LVAQRRRTLALLRTIGAKKGQLYGSVLFEAVVLGFVASVLGVVLGSLLMWGMCVSDIMQA GMRFNFSWQAAVVPILFGIVVTVLASMGSARSATAVTPLEALRPIELTDNRRSSLTRAII GILMVAVGIAMAIFSIWQVQATNGGEDASGDQFTMILLIAIAGAALVFLGMVVTAVFWMP TLMKGVGALASLTGPSATVAHANIQKNPRRIAATGAALLIGVTLVSTIATGAASAKETMN GALATRYSVDIVAMGDDISQQMVKDVSDINGVSDTLYAPAVSVTLEKADGTQPTSALLVG VKNIDQVKQVMRANLGNASIDSDSVLMPTYNAQTGKELQFANGTADFSTEWNQNGDATRS LTLQANQADYRRVSAQYGAVGFVDESHFTNGDLDAATHVLLVKADTDKSGVSVDDIYNDM QAALEKSTDATVTGPIAERIVWANMIDSMMMLLVGLIAVAVLIALVGVANTLSLSVIERT RESATLRAIGMTRGQLRRSLAVEALLISLVSGISGVLLGTLFGWLGAYVVFSMYGKVVFP FEWGINGIVLAVAAVAALLASVFPARRAVSTPPVEALAEA >gi|222441566|gb|ABXX02000007.1| GENE 53 69160 - 69906 614 248 aa, chain - ## HITS:1 COG:BS_yxjL KEGG:ns NR:ns ## COG: BS_yxjL COG2197 # Protein_GI_number: 16080942 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 4 248 3 217 218 176 44.0 5e-44 MSEEQKIRVVIADDQELVRAGFAMVIGSQPDMAVAAQARDGAEAVALAETLHPDVVLMDV RMPGMDGIEATRQISALRHRFAADGTQSEVTHTKVIILTTFDLDEYVMAAITAGASGFLL KDTEPETLLNSIRTVFQGNAIIAPSATKRLIEKMMEGDFMAANVGRPENSATTSTTDSTY TDPELDDLTDREREVLIEIAHGLSNQEIADKLFISLPTVKTHVAHILAKINARDRVQAVV FAYENHLV >gi|222441566|gb|ABXX02000007.1| GENE 54 69983 - 72592 1416 869 aa, chain - ## HITS:1 COG:all4636 KEGG:ns NR:ns ## COG: all4636 COG4585 # Protein_GI_number: 17232128 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Nostoc sp. PCC 7120 # 192 439 159 396 401 90 28.0 1e-17 MSNFKQRLLSWMHGHVFAGDLILTLVIGVRLFGVTGSITYNPGLLFDLNPSIQMAWEAAM LIPLLIRRWRPQTGALLCVALALTHLIFGPCILGADILALVMLYSVIVYGNPKNTKAFII LALAIGLLASALMAWTMTNGPLLTGGKVHTWSSWNGSNPNGAMVTEVTLGSIYTGTSMSE VADMVAQYMLVLTPIFEVCIISTVIVAFWQRARLATVRMMRERNEAIAARDQDERDIAAL AERARIARDMHDVVAHTLSIIIVQSDGGRYAGTHDPAVARNTMETIRHESERALHDMQRL LGVFGGSPHADYNDIGNLVEQARNVSPDIRIRRNITGTASPEQLGEQASIASYHVVQEAL TNIRKYAGPHVDVHIKESWNNGLLTLSVTDNGRGAAANIDGHTPGYGLLGMKERIESAGG SLQAGPQLGGGFEVMATLPYGGKEPATDETGEQYASEQSESCNTTAISSKAKLSDEAIAP HTAVNISARIPDQPSEQTQETNPPTGRDHRSNALQHLRITAPNLHDLLISLKLKSVELAN TSNSRGLNWVERVSAWTQHHYVLMDSVGAVILVMLLNRMSITFFFDSSRDAQLSHAIAAC CLLALALRRRFPETCALIVFVLSVVQLVLLGLIEVGHIVASLCALYSAVLYGREHAWRWT GLAAVTCSALMGLKIAADQHGYTTLFGAIAASAGLTKPVSATSSSSAAFFTGVMYTVAVL MLCAGIMAWARWARSSDSNALVLQAREEALVAEQEKQRILAANMERDRISASIQAEVTAT LNSVISQAVDGIHMLDSAEAQGKEPTADEISAAFKAIGEQGRAALKRMRELLGVLRETGF SDDAHAGSASELQLRPAAPLEEQLQRVSR >gi|222441566|gb|ABXX02000007.1| GENE 55 72770 - 74113 1353 447 aa, chain + ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 35 440 39 424 427 187 33.0 5e-47 MTLLSEYYVPGLHIEDRSIKVPLDWTGHEPGHGFDGESISLFYRVVTAPEHVHDDLPLLV FLQGGPGGSGPRPLGPSSDGWIEEAIKHFRVVLPDQRGTGRSSRVDTHVIEGMDGDGKAG AAFLKRFLADSIVRDFEHLRRTEFGGARWVTLGQSYGGFLTLTYLSLFPQGVIASFTTGG IPHVPADATDVYRHTFPRMAAKTKQFYERYPIDIERAATVADILRSRKVTLPNGDPLTVE RFQCLGSDFGMKPSFERVHWILDQAFLDGDGSASTSTELSDEFLSSVMDATSSRPLYWPL QEFIYANGELKTPIRWAAQRVRCEHPEFAGDIRPLNFTGEAMFPWMFEQERALRPFKPAM DVLMEDTHFGTIYDADQLARNEVPLQAAVYFDDMYVDSGLQLDTLSRVGRSHYWTTNEFE HDGVHGSTVFRHLFTEALNRGDLAELF >gi|222441566|gb|ABXX02000007.1| GENE 56 74158 - 74958 892 266 aa, chain + ## HITS:1 COG:TP0797 KEGG:ns NR:ns ## COG: TP0797 COG0345 # Protein_GI_number: 15639784 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Treponema pallidum # 6 263 3 258 263 188 41.0 1e-47 MANPTIGFIGYGNMAQAIAEGLVNAGVVNGGDIVACAAHYDKLERNAAKLGAKAVRTAAQ VAEAADMVVIAIKPYQIETVIAPIIDQLAQENTIVVSIAAGWDLNKFRDLFGTSFEQAHI QCTIPNTPMAVGKGVLVTEIDNTLTQEQTETFESLFSSISLIERVDTAHMGIGMCIAGCA PAFTDMYIEALGDAGVKYGLQRATAYRLAAKMVEGVGALYLANETHPGAMKDAVCSPGGT TIRGVASLEESAFRGAVIKAVDAIEA >gi|222441566|gb|ABXX02000007.1| GENE 57 74976 - 76073 1556 365 aa, chain + ## HITS:1 COG:Cgl1003 KEGG:ns NR:ns ## COG: Cgl1003 COG0012 # Protein_GI_number: 19552253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Corynebacterium glutamicum # 1 362 1 361 361 414 63.0 1e-115 MSLTIGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDDRLPVLAKLVHT EKIVPATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDDDIVHVNGKVD PSDDIETINTELILADLQTIENALPKLEKDLRGKKIEPAYMEAVKQAKTILEAGETIDKA AREGRFDKDSVYDLHLMSAKPFIYVFNVDDAELQNKDMQAKLAASVAPAPAIFLNAQFEA DLTELDEADAREMLADAGLEESGLDQLARVGYDTLGLSTFLTAGEKEVRAWQIHKGYTAP QAAGVIHTDFEKGFIKADIVSYDDFVAAEGSMVKIKEEGKLRQEGRDYVMQDGDIVEFKF NVSKK >gi|222441566|gb|ABXX02000007.1| GENE 58 76016 - 76213 58 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLQQPVLAEQCHDKGLRRRLLRPYPCRSSQSLVATAPLKEGSQRNTYFLETLNLNSTIS PSCIT >gi|222441566|gb|ABXX02000007.1| GENE 59 76322 - 76501 314 59 aa, chain - ## HITS:1 COG:YPO1439 KEGG:ns NR:ns ## COG: YPO1439 COG3304 # Protein_GI_number: 16121717 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 4 59 77 132 148 57 46.0 7e-09 MRVLGNILWVVLVGWRMALGYLGAGVLNCITIIGIPFGLQSFKMTKLALWPFGAEIVNL >gi|222441566|gb|ABXX02000007.1| GENE 60 76765 - 76875 79 36 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487112|ref|ZP_02028519.1| ## NR: gi|154487112|ref|ZP_02028519.1| hypothetical protein BIFADO_00952 [Bifidobacterium adolescentis L2-32] conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] hypothetical protein BIFADO_00952 [Bifidobacterium adolescentis L2-32] conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] # 1 36 26 61 61 67 100.0 4e-10 MNLYRYAMFIARACRGSFVGNVLFANPQMALFSMLV >gi|222441566|gb|ABXX02000007.1| GENE 61 77106 - 79157 2126 683 aa, chain + ## HITS:1 COG:BS_ycnB KEGG:ns NR:ns ## COG: BS_ycnB COG0477 # Protein_GI_number: 16077452 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 24 467 12 455 472 328 39.0 2e-89 MTSQKTAEFGSAASSVKPIDSHARFIVVGVIVVGSFIALLNQTVMSPALPALMRDFNITT GTVQWVTSVYMLVSGIMVPISGYLIDKFSTRKLFAGALATFMVGTLLCAVAPNFMLLLVG RILQSAGSGVLLPLVAVVPMLVYPPDKRGTAMGMAGIVMAAGPAIGPVVGGLVIDSFGWR PMFIGIAVVALVILVGGTMMLKNVGELKNPKLNILSVILSTIAFGGLLYGFSSASTMGWT SPVVIISIVVGLVAFVAFVYKQVKLDEPLLRVDTLATRNFRNSAILVTLINAAVAATNVT LPIFIQNVLGQSATVTGMVMLPAAAVGIILSPVAGAAFDKFGPRGVGIGGLALMTISLGL LGTINTRTSVLFVAVFCALQASGQAIANMPINTWGVNALPNDMIAHGNAIANTGRQIAAA IATSLLVTAETSVTASHMSQGVKSATASGIAFSYLLCAAISLVALIICIFTVTSRAKEKA ARNAKAYEAQASAEVAVETTEGQPAEHHYAGAYVAPAASLFKQAQEQSIGGIMDDQPYSC LDSDDITHVVHEFIRLNVSSLPVVNGDGRLVGFVSDGDVLKAIATYESRTVPTGTGSTMV VFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL VGVIRRKSVMEHAFDALFPKDDR >gi|222441566|gb|ABXX02000007.1| GENE 62 79521 - 80345 905 274 aa, chain + ## HITS:1 COG:no KEGG:BAD_0613 NR:ns ## KEGG: BAD_0613 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 274 12 285 297 310 76.0 4e-83 MDYQYQAVEQPSNPRKTWPIVFSVVVALTVACSAGAYVYHNKRQEALDTCRQSLAEFSSA RKAVLDTSENGSELQKLIRGALGVNDIIDAFADAATSAENTVDTEGCKADATITQLNLIA KTLDSATDSLNNSLKDIREKNGTNALQDSRNDSDGTTTNGPSSNTQSNTSSGQLLDVPSN GSSATESLDESKKELQQSLDKADKLVNKLGKDETLTLTGRKLLSALSKAVDSGQKLIENS NIKDSKYYKAAKVTLDEAIDVAENWVDRQASKAQ >gi|222441566|gb|ABXX02000007.1| GENE 63 80556 - 81572 1344 338 aa, chain - ## HITS:1 COG:lin2251 KEGG:ns NR:ns ## COG: lin2251 COG2855 # Protein_GI_number: 16801315 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 7 337 17 331 335 162 36.0 8e-40 MVFVSIVTLAASLVASWLKQFPGFSLFGALIIALLIGMAVQFPIRKWYSSRSVEHRSGVK DAAGLISNKLLRLGIILLGFKLNLTVLFTQGIKCLPIAAVVVTLTIVVCYAIARKFGVDP QLAILVAGGTGICGAAAVMGLSGSIKVPPEKEDEKANNEVMAVAIIAIMGTIFALLEITL GPLTGLSKTQLGITAGASLHEIAHAVAAGDAFGAVDIATIMKLSRVLMLVFAAIVIAVWW DKNHSEMPADGKRKVSFPWFMLGFIGASIIGTFVPFIGAIAPNLVDFAYIVLGMAMAALG INVNFSAIAKKGQKAFLASFITSVLLMCFAAGVSALFF >gi|222441566|gb|ABXX02000007.1| GENE 64 81677 - 82972 894 431 aa, chain - ## HITS:1 COG:FN0978 KEGG:ns NR:ns ## COG: FN0978 COG1757 # Protein_GI_number: 19704313 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 1 420 1 419 431 297 39.0 3e-80 MAELITMALFCGALIVCIIAGISIIPALLAGVVIFLAHGRLTGHTFTAMISKGFATMRAA SIVVVTFVLIGLLTTLWRAAGTVSFIVTNTAGLVHPHVVVLLTFLLNCLMSLLTGSSFAS AATMGVITMTLGTSMQVPPVFLGGAILSGIYFGDRCSPVSTSAQLVKTLTRTNIFDNIRL MLKTAAVPFVLTCAVYAALTLCTHPSNSSIDIAGLFSNAFDLDWVTVLPAVVLVALAIAR VDVRITMTASILTALPICVAVQHMDWTAIGHALVFGFHCADARVAPLIDGGGIVSMVKVM LIVCISSSYSGIFQETELLDGAHRMVASLARHISVFGATLVTSLVASAVACNQTLSIMLT NQLCDHLESDEHRKAINLEDTAVVVAPLIPWSIAGAVPLASVGAPTSSLTLAVFLYLLPI AHWISVSLARR >gi|222441566|gb|ABXX02000007.1| GENE 65 83172 - 84089 1017 305 aa, chain + ## HITS:1 COG:MA0367 KEGG:ns NR:ns ## COG: MA0367 COG2768 # Protein_GI_number: 20089264 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S center protein # Organism: Methanosarcina acetivorans str.C2A # 21 305 64 354 355 307 53.0 2e-83 MADFEARKLDELDHRTDDASAPEVFFTSVITPESLIGAYHALGRKPQGNVAIKIHSGESA KSNNLNPALVKDLVQEIGGTLVECATAYDGNRETPEKSLAVFKERGYADIAPIQIMDMGG EIEIPVAKHRHIAYDIVGKHIDDYDSIFVLSHFKGHPMGGFGGALKNVSIGIASSNGKRW IHSAGVATDHWVETAQDDFLESMAEADEAVISHMHGNMMYLNVMNRLSVDCDCIPTPSEP DMHDIGVLSSLDPVALDQACVDLIHVAPDGASVTERIASRHGEHTLEYAEELGIGSRSYR LTVLD >gi|222441566|gb|ABXX02000007.1| GENE 66 84218 - 84697 286 159 aa, chain + ## HITS:1 COG:no KEGG:BDP_0831 NR:ns ## KEGG: BDP_0831 # Name: not_defined # Def: phosphoribulokinase (uridine kinase family protein) # Organism: B.dentium # Pathway: not_defined # 1 155 38 192 192 261 76.0 5e-69 MLAATVNKRFGGNVLHMDDFFLRPEQRTPERFAQPGGNVDRERFETEVLAPLFAGKTVQY RPWDCHSGDFAVSRTVEPARLTIVEGSYSMHPDLRGYYDCMICLAITPAEQLRRLEQRNP RMLRRFVDEWIPLENRYFEETGTESAADMIVDTALPDNV >gi|222441566|gb|ABXX02000007.1| GENE 67 84735 - 85325 897 196 aa, chain + ## HITS:1 COG:no KEGG:BDP_0832 NR:ns ## KEGG: BDP_0832 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 4 193 2 191 191 212 86.0 6e-54 MSDSATMSVRALHRTELPKLSLSTKAAATVLAIVAAVALPQLFHVIGAVSGQGTMLGVAF LPMHLPIIFVGLIAGPAVGAIAGAAAPLASFLLSGMPMLAMLPLMMVELCAYGLVAGLLR EVKLPSLAKVVIAQLAGRVVLTAATAIAVFAFGSSKAVAATWTSDLAAGLPGLALQWALI PLAAYWTESLIAKRNH >gi|222441566|gb|ABXX02000007.1| GENE 68 85337 - 85498 90 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212716988|ref|ZP_03325116.1| ## NR: gi|212716988|ref|ZP_03325116.1| hypothetical protein BIFCAT_01934 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFPSEUDO_04449 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFCAT_01934 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFPSEUDO_04449 [Bifidobacterium pseudocatenulatum DSM 20438] # 12 53 1 42 42 72 100.0 8e-12 MPAASTSSNVVMDTPAIMTVSPDFPTDMTTGAKRNGLAPENIGFVQNVADCRV >gi|222441566|gb|ABXX02000007.1| GENE 69 85446 - 86285 862 279 aa, chain + ## HITS:1 COG:Cgl2018 KEGG:ns NR:ns ## COG: Cgl2018 COG0730 # Protein_GI_number: 19553268 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 2 271 3 264 269 96 28.0 6e-20 MIAGVSITTLLLVLAAGIGAGFVGYAVGASSLISYPALLAFGIPPVLSNTTNTVGVCGTG IGGLLSARKELKGQGVRVAVYACIGLVGGIIGGLLLLELPAEVFECAVPPLILFSAIIIA LNPRKKAAARDAVAQALPQSHQGERAARIASKTASGTLRNDPWWLWLGVSFVGIYSGYFG AAAGTLALAILDLGKIGPFHQINALKTVVGFGANISAAIMFIIRGSVDWPFAIMMCLGCT IGSAIAPPVTRHIPENIMRAAAVLTGIILAVKLGWSTYL >gi|222441566|gb|ABXX02000007.1| GENE 70 86421 - 87347 1003 308 aa, chain - ## HITS:1 COG:lin0524 KEGG:ns NR:ns ## COG: lin0524 COG0582 # Protein_GI_number: 16799599 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 1 308 1 309 309 389 60.0 1e-108 MQENITSESLFCDYYAQWVRTYKEGAIRDVTMGKYRLTQSWIGKLIPELRLADMDRTAYQ QLINGYAQHHERQTTMDFHHQIKGAILDAVDEGLIPRDPTRKVIIKGKQPRIKKMKYLNQ FELHAMLADLDLGDEASWDWLILLIAKTGLRFSEALGLTPDDFDFAHQTLSVSKTWDYKN GGGFVPTKNESSVRKVQLDWQLIMQLSGLLKNLPHDKPIFVHGKVYNSTANDVLARHCKN VDVPVISIHGLRHTHASLLLFAGVSIASVSRRLGHASMTTTQETYLHVIRELENKDVDIV MRALSTLI >gi|222441566|gb|ABXX02000007.1| GENE 71 87930 - 88367 243 145 aa, chain - ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 143 42 184 184 117 46.0 8e-27 SNWYPSHFVVDDVEFSSMEQYMMYRKACCFSDAETAARILETDDVAEIKRLGRRVAGYDD HVWNGVRQIEVYEGLLAKFRQNAELGARLEVTGIALLAECAVKDRIWGIGLSMHDPARFN PSQWRGRNLLGYALMLTRRKLSRID Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:42:34 2011 Seq name: gi|222441565|gb|ABXX02000008.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont7.1, whole genome shotgun sequence Length of sequence - 20036 bp Number of predicted genes - 18, with homology - 15 Number of transcription units - 14, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 344 97.0 # CP001213 [D:902284..905348] # 23S ribosomal RNA # Bifidobacterium animalis subsp. lactis AD011 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + 5S_RRNA 679 - 790 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. 1 1 Tu 1 . + CDS 1016 - 1228 171 ## BDP_2217 hypothetical protein + Term 1277 - 1337 12.5 - Term 1332 - 1370 1.8 2 2 Tu 1 . - CDS 1392 - 1973 821 ## COG0717 Deoxycytidine deaminase - Prom 2085 - 2144 1.7 3 3 Tu 1 . - CDS 2221 - 3024 605 ## BDP_2232 phospholipase/carboxylesterase - Prom 3211 - 3270 2.0 4 4 Tu 1 . + CDS 3023 - 3193 101 ## + Term 3265 - 3307 1.1 5 5 Tu 1 . + CDS 3329 - 3550 94 ## - Term 3311 - 3346 0.1 6 6 Tu 1 . - CDS 3547 - 6096 2288 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 6199 - 6258 2.7 7 7 Tu 1 . + CDS 6019 - 6174 76 ## COG0590 Cytosine/adenosine deaminases + Prom 6221 - 6280 3.1 8 8 Tu 1 . + CDS 6409 - 8721 2661 ## COG3345 Alpha-galactosidase + Term 8743 - 8780 2.1 - Term 8776 - 8809 -1.0 9 9 Tu 1 . - CDS 8811 - 10013 872 ## COG1940 Transcriptional regulator/sugar kinase + Prom 10029 - 10088 4.3 10 10 Op 1 35/0.000 + CDS 10221 - 11513 1510 ## COG1653 ABC-type sugar transport system, periplasmic component 11 10 Op 2 38/0.000 + CDS 11528 - 12463 1171 ## COG1175 ABC-type sugar transport systems, permease components 12 10 Op 3 4/0.000 + CDS 12502 - 13386 1076 ## COG0395 ABC-type sugar transport system, permease component + Term 13527 - 13576 13.5 + Prom 13560 - 13619 4.6 13 10 Op 4 . + CDS 13788 - 15608 2229 ## COG0366 Glycosidases + Term 15632 - 15692 18.1 14 11 Tu 1 . + CDS 15824 - 17089 1599 ## COG1171 Threonine dehydratase + Term 17130 - 17190 6.7 - Term 17231 - 17270 2.0 15 12 Tu 1 . - CDS 17336 - 18091 682 ## COG0846 NAD-dependent protein deacetylases, SIR2 family - Prom 18167 - 18226 2.9 + Prom 18132 - 18191 1.7 16 13 Op 1 . + CDS 18214 - 18381 77 ## 17 13 Op 2 . + CDS 18422 - 19300 672 ## COG0657 Esterase/lipase + Term 19325 - 19382 17.1 18 14 Tu 1 . + CDS 19384 - 19908 -9 ## gi|225352349|ref|ZP_03743372.1| hypothetical protein BIFPSEUDO_03965 + Term 19965 - 20005 -0.5 Predicted protein(s) >gi|222441565|gb|ABXX02000008.1| GENE 1 1016 - 1228 171 70 aa, chain + ## HITS:1 COG:no KEGG:BDP_2217 NR:ns ## KEGG: BDP_2217 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 58 1 58 83 110 91.0 3e-23 MHYFVPKRCVESNKIMYRDKATARQAADQSWRERGTELWVYRCEFCGTWHLTHRDPQALK GVTNRCCSIF >gi|222441565|gb|ABXX02000008.1| GENE 2 1392 - 1973 821 193 aa, chain - ## HITS:1 COG:ML2507 KEGG:ns NR:ns ## COG: ML2507 COG0717 # Protein_GI_number: 15828356 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Mycobacterium leprae # 1 188 1 188 190 263 67.0 2e-70 MLLSDRDILAAQAEGHISLDPWTPEMVQPASIDVRLDRFFRLFNNHAYTYVDPAENQGEL TEQFEVAPGEPWILHPGEFALGSTWEYVKLDPTIAARLEGKSSLGRLGILTHSTAGFIDP GFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEHPYGSQGTGSHYQGQRGPTPS RSYVNFYKADITD >gi|222441565|gb|ABXX02000008.1| GENE 3 2221 - 3024 605 267 aa, chain - ## HITS:1 COG:no KEGG:BDP_2232 NR:ns ## KEGG: BDP_2232 # Name: not_defined # Def: phospholipase/carboxylesterase # Organism: B.dentium # Pathway: not_defined # 23 267 8 252 252 439 87.0 1e-122 MSEIREHETSDSHDSSNPNTPTSLIGRESQVVPGRFGEPLQVTHVQYSRGGGNAAPRRPL FLCLHGWGSNEADLADMMRYVAPYNDFASLRAPLVLQEAGSGEFGFGQGAYSWFHDCVPS GEDLDRDAYAAAQAIDDWVARNVPEDRAVVPIGFSQGGLLAIHLLRVHPERYAASISLSG FLAPGIVAGSAPADSHVAELNIPVFYGYGKNDTVIPMPELFATAAWLDEHTFLTSKSYRG LDHAVSLNEFSDLRDWLAAHDIAPGIL >gi|222441565|gb|ABXX02000008.1| GENE 4 3023 - 3193 101 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPPIYPFQRGNPPSHWKDWDVGRLASGVIVPVSGGFWTLSELPAGGFSHWLEESTR >gi|222441565|gb|ABXX02000008.1| GENE 5 3329 - 3550 94 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSTCLVFSGKYLRISIPSCFRLWNGLQFAAFHAVFRSYSCLVPHVSTVRPQTNSLRITG SRQLADPIRSVGC >gi|222441565|gb|ABXX02000008.1| GENE 6 3547 - 6096 2288 849 aa, chain - ## HITS:1 COG:lin0795 KEGG:ns NR:ns ## COG: lin0795 COG0025 # Protein_GI_number: 16799869 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Listeria innocua # 163 838 4 669 682 365 33.0 1e-100 MTDMRVARNVPNRTACTQLGIPRAEHDSSDMRLQARAGAHRARLQGNNQRAIGKIPRTKR PSGLRHGLDLGVRQRIGVRLAQITATADHRSPSVKHDGTDRYLAFRGGLAGQFNRQLHVV TPLHTRHYTVARVKQKTKHAHKYLLVGWKGLENARKGGTLAAFELIVCIIAAVVLSSFLS RFIPKVSTPLVQIALGALASQLPFFPNVTLDPELFMVLFIAPLLYLEAHEIDKSELLKSV TLSLSLAIGLAIATMVAVGFALHAVWPAIPLAAALALGAALGPTDAVAVSSLGKEAALTQ RQTSVLKGESLFNDASGIVGFQFAIAAAVSGVFTVGDSAAQFVFSFFGGAIFGLAVGMVA DLLFESLRSFGWETTTSRILMELFLPFILYLGAEAVHVSGILSVVTAGLIIRFDRTGIGP NVARTNIVSSSVWGVFSFTLNGTVFILLGMLLPNAMSASWDDPQVSNWLLLVAILTVSAV VIIMRFLWISLMLRLARDTVTGKRRKMTAQRWRSAAVMTFGGPKGTITLSLMFTIPYTIT GGAWFPMRDELIFIAGGVIVVTLLLANFLLPLLAPNRNKDTSVEMTEITIEVLRRTVEEL TGRVTPDNRRAVLMIIDSYTKRITRLKQRIGEIDPQGYMQLQIDALNWEKEYVKARLAKV KATTNDDKAAHDLEIEACERLLDQIMSSLRHIETEHNSGRTIWRVKGRFRALQRRLGTVV KRVNSRIRRTTPLFSDDELFAHTRAVQVDAIEHVIDRLYEEMGRDTYNTEHCSALLLDYR RGEATLRSRPNVGTSAEAQAQAEEVKRESYGIELGVIQDMYEAGDITRAQSKQLRRNVYV MSVDADAQI >gi|222441565|gb|ABXX02000008.1| GENE 7 6019 - 6174 76 51 aa, chain + ## HITS:1 COG:Cgl0229 KEGG:ns NR:ns ## COG: Cgl0229 COG0590 # Protein_GI_number: 19551479 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Corynebacterium glutamicum # 1 51 109 159 159 59 54.0 1e-09 MFGAWDAKLGACGSIWDIPRDPHVGHVPEVIGGVRESECARLMTDFFAGKR >gi|222441565|gb|ABXX02000008.1| GENE 8 6409 - 8721 2661 770 aa, chain + ## HITS:1 COG:YPO1581 KEGG:ns NR:ns ## COG: YPO1581 COG3345 # Protein_GI_number: 16121851 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Yersinia pestis # 126 760 76 703 708 386 34.0 1e-107 MTLIQTFHGNATNGTELTAVYAEQPAANVAFALVFPGNDLPRLVHWGRPLAAPATVIDMF DAQMPQRVSGALDYTSWPSVLPTQSESWIGATRFDVRRDGVELFCKFAVSNITAETVAAG KTYVMGEKDGYPNWSVADEPKQTPTVTVTAEDEEQHVKLIWTCELDETGLIRQNAEVVNT GEGQLEVGKIELAFTVPADANEILTTTGHHLRERSPQRQDFTLGRFAKASMAGRPDFDAT LLLSVGEKGFGFTHGNVYSAHVAWSGNSVLSAERLPYTSGVIGGGEVLFGGEISLANGES YTTPWLIGSYGEGLNEVAARFHSYIRRVHRDWLAEHNIAPKPRPVILNTWEAVYFNHDYD TLTALADKAVESGVERFVVDDGWFGSRRDDTSGLGDWQISQDVWPDGDKSLKALADYVHG KGLEFGLWFEPEMVNPDSDLFRAHPDWVLKPTEGRLPMQGRTQQVVDLTNPDAYDYIYGA MDKLVGELGIDYIKWDHNKLVTEAVSPRTGRPAVHQQTLAVYRIFTDLKAAHPGLEIESC SSGGGRVDLGILEVADRIWGSDCVDPVERADIQRYTSLLVPPEMIGEHVGASPAHSTHRA TTQELRMAMAFFGHMGIEWNLLKEPQEDIDKLAEWVAEFKKHREWFAVDTVVHSDAADPA VRLDGVVMPNQAAAIYRFTQLTTSQTYPAAPARLPGLDPDKVYEVSPLDVSLDLAKQDIA NGQSPLGWWKAGGVRMTGRALATYGIRPPALHPAQAVLFKAVLAPVESAE >gi|222441565|gb|ABXX02000008.1| GENE 9 8811 - 10013 872 400 aa, chain - ## HITS:1 COG:VC2007 KEGG:ns NR:ns ## COG: VC2007 COG1940 # Protein_GI_number: 15642009 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Vibrio cholerae # 18 346 19 341 405 95 24.0 2e-19 MAVSPLPQWFEGSEYTHKVAACIMKYGPISRITLAQILGLSQGAVSRITSDLIYAGVIEE TPMPSGKAGKLPKGFVQKENTERRGRPQTGLQVIANARSFVGMKINATHISAVAVNAIGQ IITGCHDLKIEDASPQTVVALIKQLTTDCSDEAEMAGWPKPCAVGISLGGHIVDGTVVTF APFMHWSQPVELSVMVREATGLPTGIYNDIDSLVVDACLFGPGVGLNSFAVLTFGAGVGY SLTVNGELVSCPDKSYGLVGHILVDPDGPRCVSGHRGCAQCLSDNSIAAEYSQIIGHPAS FDDFARDARANKPQATNLVNRTCFRLGTLVATIANLAMPDKIMIAGESSFIAKFGIDDLR NGINMYRHSQAAPVDFEIPDHDWALWAKAAASQAIRQYVG >gi|222441565|gb|ABXX02000008.1| GENE 10 10221 - 11513 1510 430 aa, chain + ## HITS:1 COG:SP1897 KEGG:ns NR:ns ## COG: SP1897 COG1653 # Protein_GI_number: 15901724 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 19 426 8 416 419 116 26.0 1e-25 MKPDSTTSVGKFRRIVYRALTAACAIALTAGLAGCGNSTAGTVTLDFFQFKAEAADWFTA KAKEFEKTHPNIKVNVNNSSDATTDLRTRLVKNREPDVITINGDINFGMLAEAGVFHDFT DDDIVDELNPGMVNIAKSLVQTNDESKKRLYGLPYAGNASGYIINADVWEEAGEDPDNPP QTWSEFIDLLQRFKSKGIVPIEASTADPWTLQAPLASLNSTLVPESEYLSLKDGSKKFSD LWGTVSDQLVEIYQNYTQKNPAVTYQQATQDLAAGKAAILPLGTYAIPQIRLINSDANLR FAQMPATDDASEQQLTAGDDVILTMGAHTKHEKEAREFIDFLMNDENIKDYSKRQSAFTP YKDTYVGDEALNGVLDFYRAGKLADFCDHYVPASINLAGFLQTLVQSGNTEKFLNSVQSE YDKIEARNFR >gi|222441565|gb|ABXX02000008.1| GENE 11 11528 - 12463 1171 311 aa, chain + ## HITS:1 COG:SP1896 KEGG:ns NR:ns ## COG: SP1896 COG1175 # Protein_GI_number: 15901723 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pneumoniae TIGR4 # 34 303 16 289 296 190 41.0 3e-48 MTTAHTANTAKNSAENSKNKVSKYSKRKVDPAFYWMTVPAVILVSIFLYWPFLQGAAYSF TNSQGYGDFKFIGLKNYIAMFQDSRVGHAYLFTILIAILITIGTNFLGMFLAVLLNSKIA FKNGFRAIFFIPYTLSVLVIGYVFKYIFMTPLPALGQALHIDWLSTSMISNPDLAWFPIV FLSIWQGVAYSTLLYLAGLQTIDNEIYEAAAIDGVSAWQNFWQITFPLIGPFFTINMVLS LKNSLGAFDQIMALTKGGPDSKTETVSYLIFQNGLGNGEYSYQMANAVTFFIVLAILAFV QLKFFSGKEKV >gi|222441565|gb|ABXX02000008.1| GENE 12 12502 - 13386 1076 294 aa, chain + ## HITS:1 COG:SP1895 KEGG:ns NR:ns ## COG: SP1895 COG0395 # Protein_GI_number: 15901722 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 41 294 21 278 278 167 40.0 2e-41 MTSATVAKTAAKTTQSQAKPEKIRRDHKVNWWLTAAVAVLSLTVLVPLYFAVVTALKTPS EAGTFSLPTTWEWHNFADAWNKVNYPKAALNSAIITVCAVVLTLLTNTFVAYAVARNMDK RFFRFLYYFFLAMMFVPFTVIMLPIAKEMGSLHLDNQLGLIILYTILGIGTNLFIAIGFI RSIPISLEEAARIDGASTWRIFWTIIFPLMGPINATIAILTALWAWNDFLLPLITLTDQS NQTIPLAQYVFQSQFTSNYPMAFASYLMAMAPVLIVYIFAQKWVVGGVMRGAVK >gi|222441565|gb|ABXX02000008.1| GENE 13 13788 - 15608 2229 606 aa, chain + ## HITS:1 COG:BH2903 KEGG:ns NR:ns ## COG: BH2903 COG0366 # Protein_GI_number: 15615466 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus halodurans # 23 583 5 536 561 529 48.0 1e-150 MTNFNRSTLPDTVRSNGATPNPWWANAVVYQVYPRSFQDTNGDGIGDLKGITSRLDYLAD LGVDVVWLSPVYKSPQDDNGYDISDYQDIDPLFGTLEDMDELLAEAHKRGLKIVMDLVVN HTSDEHAWFQASRDKDDPHADWYWWRPARPGHEPGTPGAEPNQWGSYFGGSAWEYDPKRG EYFFHQYSKKQPDLNWENPEVRKAVYKMMNWWMDRGIDGFRMDVITQVSKTVDKNGKLPG EDGCEIEDYPVGEEGYSSPFPWCSDGPRIDEFLAEMRREVFEGREGYMNVGEAPGITPAR NEHVTDPKNGELDMLFLFDHVGIDQEGSKWNTVPFEVKNLRARLADQQEAVKNAGWASLF FCNHDQPRVVSRWGNDTDRESRELSAKAFGMLLHMHRGTPYIYEGEELGMTNAHFTTLEQ YRDLESINAYRQRVEEAKCQSAESMMAALALIGRDNSRTPMQWDASRYAGFTAPDAATEP WIGVNPNHVEINAAEEFDDPGSVYSFYKKLIAMRHNNATIATGEWNLVAADSEQVYSFTR TSGDDTILVIVNLTDRTAQVPAEVAQLLEDGVGESQVLLSTYDAVHSVKSVARGELARWE GVVIQL >gi|222441565|gb|ABXX02000008.1| GENE 14 15824 - 17089 1599 421 aa, chain + ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 21 420 10 399 404 333 46.0 5e-91 MEQNEVLKALQRDHAAELKLAAERLKGTARHTEIIPSKVLSDMTGHEILLKPENLQVTGS FKIRGAYNKIASLSDEQLARGIVTASAGNHAQGVAYAARERGAKATICMPQITPPLKVDA TKAYGADVVLYGEVFDESAARAQELSDTEGMIYVPPFDDYEVLCGQGTIGLEILEDVPNV TDVVVPLGGGGLGAGVALAIKTFKPEVRVIGAIPEGSPAWKNSLAAGHVVAADQVRTSAE GVAVKRPGDLTFALLNEFLDDIVTVTERDINEMILLMLEKHKLVVEAAGAVSLAALEHLN LRSRKFAEAKGPHVVVPIMSGGNEDTVSIGAVIQKGMITRGRIMHFEVELPDTPGQLVKV ATLLAEQRANVIALDHDQFKASSHYANAVALGVTVETNGPDHIDRVLEALREAGFQPKRI Y >gi|222441565|gb|ABXX02000008.1| GENE 15 17336 - 18091 682 251 aa, chain - ## HITS:1 COG:TM0490 KEGG:ns NR:ns ## COG: TM0490 COG0846 # Protein_GI_number: 15643256 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Thermotoga maritima # 2 227 13 224 246 169 38.0 4e-42 MSKKIAVLTGAGISTSAGIPDFRGPDGVWTKHPEQTQVYDIEAFLCHEEDRKYSWRWQKE SPVWTAQPGTAHKALVKLEQAGMLTLLATQNFDALHEKAGNSSDVIVNLHGTIGTSHCMK CHAKYDTADIMANLDNEPDPHCHRRLPYSGNMPCNGLIKTDVVYFGEALPDGALEKSYRL ATQADELWVIGSTLEVMPAASIVPIAAEAGVPITIMNMGRTQYDRLADRLIHDDIAVALP QLVDETITAEQ >gi|222441565|gb|ABXX02000008.1| GENE 16 18214 - 18381 77 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTDIAQNIADDGADAAETAETTETVTAIGAIDIESMVAPPSPTQLAPIPTPRAD >gi|222441565|gb|ABXX02000008.1| GENE 17 18422 - 19300 672 292 aa, chain + ## HITS:1 COG:alr0079 KEGG:ns NR:ns ## COG: alr0079 COG0657 # Protein_GI_number: 17227575 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Nostoc sp. PCC 7120 # 8 271 150 382 411 97 25.0 2e-20 MISDLDQDDFGYPVNIEQVTYVTRQLADDSSVDLPMWVFTPGVDNMPEGAMPEGGWPVIV FVRGSAFHEQNVTDCSNYFVRIAEQGYVVAALKYRHSDIAPFPAQMQDCKTAVRFMRKNA ERFHCNKDRIALWGDSSGGHTVLMAGFTGNRAPDTDAYAEESVEVNAIVDWHGPTDFAKM NFYPSSQNHSDPQCPEGVVIDGGDVLEHPDLSAPASPMTYLSADMPTPSTLIMHGGRDQL VPFNQSCRLYATLKALGKDVTFYKLDNACHACYGFRSARALRLVFDWLSDRL >gi|222441565|gb|ABXX02000008.1| GENE 18 19384 - 19908 -9 174 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352349|ref|ZP_03743372.1| ## NR: gi|225352349|ref|ZP_03743372.1| hypothetical protein BIFPSEUDO_03965 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04469 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04469 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03965 [Bifidobacterium pseudocatenulatum DSM 20438] # 56 174 1 119 119 240 99.0 3e-62 MGCAGVGFAIYGVRKTDFDTPTLSSVCKGPRLVSSCPICVEWDCAVGLSLAAARRVVPRL GCLEAGERWWFENSRAYLYYFFIVNDCQFIVRSFASGREALKDGEVFVRCAFPYKAIVNF LVFESHMLAFCKVFLWRVRFWLRMNAGGVLNTCKSNGIHQALLGGESGERVSNA Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:07 2011 Seq name: gi|222441564|gb|ABXX02000009.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont8.1, whole genome shotgun sequence Length of sequence - 3068 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 4/0.000 - CDS 2 - 263 85 ## COG0732 Restriction endonuclease S subunits 2 1 Op 2 . - CDS 196 - 1542 855 ## COG0732 Restriction endonuclease S subunits 3 1 Op 3 . - CDS 1544 - 1915 418 ## BBPR_1152 type I restriction-modification system methyltransferase subunit (EC:2.1.1.72) 4 2 Op 1 4/0.000 - CDS 2037 - 2897 966 ## COG0286 Type I restriction-modification system methyltransferase subunit 5 2 Op 2 . - CDS 2875 - 3045 70 ## COG0286 Type I restriction-modification system methyltransferase subunit Predicted protein(s) >gi|222441564|gb|ABXX02000009.1| GENE 1 2 - 263 85 87 aa, chain - ## HITS:1 COG:SA0392 KEGG:ns NR:ns ## COG: SA0392 COG0732 # Protein_GI_number: 15926110 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 8 83 245 320 403 78 48.0 2e-15 MNELPIERFLSVSVANGIYPASESDRETNPGASLANYKIVHFGDVVYNSMRMWQGAVDAS RYDGIVSPAYVVARPNSEVYARFFARL >gi|222441564|gb|ABXX02000009.1| GENE 2 196 - 1542 855 448 aa, chain - ## HITS:1 COG:L0310 KEGG:ns NR:ns ## COG: L0310 COG0732 # Protein_GI_number: 15672634 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Lactococcus lactis # 11 395 8 406 407 337 47.0 3e-92 MAEQHGKALVPQIRFAGFTDPWEQRKLGELFEESDERASDREILSVSVANGIYPASESDR ETNPGASLANYKIVHFGDVVYNSMRMWQGAVDASRYDGIVSPAYVVARPNSEVYARFFAR LLRQPMLLKQYQQVSQGNSKDTQVLKFDDFASIGISMPASENEQRQIGGFFDRLDSLITL HQRKYDKLCVLKKSMLDKMFPKGGSLYPEIRFAGFTDPWEQRKLGEVAHFINGRAYSQNE LLSSGKYPVLRVGNFYTNDSWYYSNLELEDKNYAYEGDLLYTWSATFGPHIWHGNKVIYH YHIWKVQLEAALEKLFAFQLLERDKERILSDKNGSTMVHITKTGIENTSVLMPCSVEEQR RIGAFFDRLDSLITLHQRKYDKLCVLKKSMLDKMFPKGGSLYPEIRFAGFTDPWEQRKLG ELFEESDERASDREIFVCQRSQRDIPSI >gi|222441564|gb|ABXX02000009.1| GENE 3 1544 - 1915 418 123 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1152 NR:ns ## KEGG: BBPR_1152 # Name: not_defined # Def: type I restriction-modification system methyltransferase subunit (EC:2.1.1.72) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 123 733 855 855 147 59.0 1e-34 MQSQKLFDEAKKLKSGIKTKRNALEEKTYNTIKALSDEEARRLLEAKWITPLQKQLEELP NAVIDELIGKVNALKNKYATTYADVCGQIDEAEKELAGMLGDLTGNARDMAGLEELKALL GGE >gi|222441564|gb|ABXX02000009.1| GENE 4 2037 - 2897 966 286 aa, chain - ## HITS:1 COG:all2688_1 KEGG:ns NR:ns ## COG: all2688_1 COG0286 # Protein_GI_number: 17230180 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Nostoc sp. PCC 7120 # 1 102 219 322 322 103 45.0 3e-22 MVLRKKRDDDRVLIVDASKHFIKDGKNNKLQASDIKRIVDVVSNNRTVPKFSRLVSIDEI RANDYNLNIPRYVDSSEDAEMWDVYASMFGGVPKSEVEQLEEYWNAWPSLKAELFRDNGA CYACDHDDIATVVRNNADVQAFIASYGQAISGLPADLRSRLVAHPEQVDALGQETAIGKE LDAMVADTALIDPYDAYQKLDDAWNGISIDLEVLGSEGFDAVRAVDPNMVVKKKAGKDVE VQDGWIGRVLPFDLVQRELLHDDLAAIETDERRVQDIDRVNIWKFR >gi|222441564|gb|ABXX02000009.1| GENE 5 2875 - 3045 70 56 aa, chain - ## HITS:1 COG:SA1626 KEGG:ns NR:ns ## COG: SA1626 COG0286 # Protein_GI_number: 15927382 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Staphylococcus aureus N315 # 1 46 350 396 518 70 65.0 6e-13 MTIVLPHGVLFRGGEEGQIRKNLIENRHIQAIIGLPANIFFGTGIPHHRDGVAQKT Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:13 2011 Seq name: gi|222441563|gb|ABXX02000010.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont9.1, whole genome shotgun sequence Length of sequence - 2140 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 1 - 1046 100.0 # D86187 [D:1..1513] # 16S ribosomal RNA # Bifidobacterium pseudocatenulatum DSM 20438 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:14 2011 Seq name: gi|222441562|gb|ABXX02000011.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont10.1, whole genome shotgun sequence Length of sequence - 2239 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 344 282 ## EUBREC_0882 hypothetical protein 2 1 Op 2 . - CDS 353 - 1552 699 ## COG0732 Restriction endonuclease S subunits Predicted protein(s) >gi|222441562|gb|ABXX02000011.1| GENE 1 2 - 344 282 114 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0882 NR:ns ## KEGG: EUBREC_0882 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 114 7 120 221 184 71.0 1e-45 MAIITLFHGSPHESVTPEYGLGNDKHDYGRGFYLTKSVELAKEWAVCRPDESNGWVHQYE LDTNGLRILDFQEHNVLAWLAELMKHRDAADSKRYRVLAAKFIAKYGIETSSYD >gi|222441562|gb|ABXX02000011.1| GENE 2 353 - 1552 699 399 aa, chain - ## HITS:1 COG:L0310 KEGG:ns NR:ns ## COG: L0310 COG0732 # Protein_GI_number: 15672634 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Lactococcus lactis # 2 201 208 406 407 274 66.0 2e-73 MLDKMFPKGGSLYPEIRFAGFTDPWEQRKLGEVAHFINGRAYSQNELLSSGKYPVLRVGN FYTNDSWYYSNLELEDKNYAYEGDLLYTWSATFGPHIWHGNKVIYHYHIWKVQLEAALEK LFAFQLLERDKERILSDKNGSTMVHITKTGIENTSVLMPCSVEEQRRIGAFFDRLDSLIT LHQRKYDKLCVLKKSMLDKMFPKGGSLYPEIRFAGFTDPWEQRKLGELFEESDERASDRE ILSVSVANGIYPASESDRETNPGASLANYKIVHFGDVVYNSMRMWQGAVDASRYDGIVSP AYVVARPNSEVYARFFARLLRQPMLLKQYQQVSQGNSKDTQVLKFDDFASIGISMPASEN EQRQIGGFFDRLDSLITLHQRKLELLRNIKKSMLDKMFV Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:18 2011 Seq name: gi|222441561|gb|ABXX02000012.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont11.1, whole genome shotgun sequence Length of sequence - 1768 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 8 - 655 311 ## PROTEIN SUPPORTED gi|23335919|ref|ZP_00121150.1| COG0081: Ribosomal protein L1 2 1 Op 2 . - CDS 664 - 1020 172 ## COG0732 Restriction endonuclease S subunits 3 2 Tu 1 . + CDS 1045 - 1221 90 ## 4 3 Tu 1 . - CDS 1247 - 1735 276 ## COG3236 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|222441561|gb|ABXX02000012.1| GENE 1 8 - 655 311 215 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23335919|ref|ZP_00121150.1| COG0081: Ribosomal protein L1 [Bifidobacterium longum DJO10A] # 2 197 4 198 226 124 38 5e-29 MAIITLFHGSPHESVTPEYGLGNDKHDYGRGFYLTKSVELAKEWAVCRPDESNGWVHQYE LDTNGLRILDFQEHNVLAWLAELMKHRDAADSKRYRVLAAKFIAKYGIETSSYDIIKGWR ANASYFYIAKEFVRDNVDVDILEELLSLGGLGIQYCIKSEKAYGQLREVKDGLLSVSYSE FNDKYNQRDVEARQNMRDLIDSDANTVTNVFSTLL >gi|222441561|gb|ABXX02000012.1| GENE 2 664 - 1020 172 118 aa, chain - ## HITS:1 COG:SA0392 KEGG:ns NR:ns ## COG: SA0392 COG0732 # Protein_GI_number: 15926110 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 1 118 287 403 403 89 40.0 2e-18 MRMWQGAVDASRYDGIVSPAYVVARPNSEVYARFFARLLRQPMLLKQYQQVSQGNSKDTQ VLKFDDFASIGISMPASENEQRQIGGFFDRLDSLITLHQRKLELLRNIKKSMLDKMFV >gi|222441561|gb|ABXX02000012.1| GENE 3 1045 - 1221 90 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHYFVVRETRARIRLPIGLRCWVYPVGYADRQNLSIGSSFITLLEQFTQLTLFPSGDN >gi|222441561|gb|ABXX02000012.1| GENE 4 1247 - 1735 276 162 aa, chain - ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 17 160 41 184 184 119 45.0 2e-27 MTGIVCFHNPDEENGYLSNWYPSHFVVDDVEFSSMEQYMMYRKACCFSDAETAARILETD DVAEIKRLGRRVAGYDDHVWNGVRQIEVYEGLLAKFRQNAELGARLEVTGIALLAECAVK DRIWGIGLSMHDPARFNPSQWRGRNLLGYALMLTRRKLSRID Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:27 2011 Seq name: gi|222441560|gb|ABXX02000013.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont12.1, whole genome shotgun sequence Length of sequence - 1816 bp Number of predicted genes - 3, with homology - 1 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 64 - 228 65 ## + Term 235 - 293 -0.2 2 2 Tu 1 . - CDS 282 - 557 133 ## - Prom 636 - 695 5.0 + Prom 387 - 446 5.0 3 3 Tu 1 . + CDS 669 - 896 82 ## gi|225352850|ref|ZP_03743873.1| hypothetical protein BIFPSEUDO_04484 + Term 978 - 1010 1.1 Predicted protein(s) >gi|222441560|gb|ABXX02000013.1| GENE 1 64 - 228 65 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVMKRAWEIAKAGQRKFGGKVRNTLQNLSGSRGRRQKQKKKLRWKMLKPTSIP >gi|222441560|gb|ABXX02000013.1| GENE 2 282 - 557 133 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFDNRKCLGSFWCPPLQAPGKQFRNKTFLYTQFSFLFPPNFYAFIFSAFKSPKRFCYRCI CATFLCHNNTVLQFKKPLFFTVSGSGIVIYV >gi|222441560|gb|ABXX02000013.1| GENE 3 669 - 896 82 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352850|ref|ZP_03743873.1| ## NR: gi|225352850|ref|ZP_03743873.1| hypothetical protein BIFPSEUDO_04484 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04484 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 75 13 87 87 114 98.0 2e-24 MEESEFLEAAEKIKEIIAERNNRRKNRAEASEMYREMRKTFKPLGIKVWEAKDAAKNLGH IGGRDRRRRLSGGPF Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:45 2011 Seq name: gi|222441559|gb|ABXX02000014.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont13.1, whole genome shotgun sequence Length of sequence - 1680 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 259 222 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 2 1 Op 2 . - CDS 260 - 664 312 ## BLD_1962 type I site-specific restriction-modification system R subunit 3 1 Op 3 . - CDS 651 - 1052 116 ## COG0732 Restriction endonuclease S subunits + Prom 821 - 880 2.1 4 2 Tu 1 . + CDS 1077 - 1253 90 ## 5 3 Tu 1 . - CDS 1279 - 1665 239 ## COG3236 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|222441559|gb|ABXX02000014.1| GENE 1 1 - 259 222 86 aa, chain - ## HITS:1 COG:SPy1904 KEGG:ns NR:ns ## COG: SPy1904 COG0610 # Protein_GI_number: 15675717 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Streptococcus pyogenes M1 GAS # 4 79 134 209 992 74 47.0 4e-14 MLNDRRGDVCLLINGMPVIHIELKKSGIPISQATNQIAKYAHEGVFTGLFRLVQVFVAMN PDDAVYFANPGEGDFNDDYSSIGLTT >gi|222441559|gb|ABXX02000014.1| GENE 2 260 - 664 312 134 aa, chain - ## HITS:1 COG:no KEGG:BLD_1962 NR:ns ## KEGG: BLD_1962 # Name: hsdR # Def: type I site-specific restriction-modification system R subunit # Organism: B.longum_DJO10A # Pathway: not_defined # 1 133 1 133 1095 200 71.0 2e-50 MFYDKESDFEDDLVAVLKRHGWTDGVLEYPTEQDLIDNWASILFDNNKGIDRLNGQRLTK GEMAQILEQIETLRTPLALNSFINGKTVSIKRDNPRDEAHYGKEISLKIYDRQEIAAGQS RYQIARQPIYPAKK >gi|222441559|gb|ABXX02000014.1| GENE 3 651 - 1052 116 133 aa, chain - ## HITS:1 COG:SA0392 KEGG:ns NR:ns ## COG: SA0392 COG0732 # Protein_GI_number: 15926110 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 1 101 287 386 403 77 39.0 6e-15 MRMWQGAVDASRYDGIVSPAYVVARPNSEVYARFFARLLRQPMLLKQYQQVSQGNSKDTQ VLKFDDFASIGISMPASENEQRQIGGFFDRLDSLITLHQRKYCGVASWMLGVALVRLGSE SDGAFGEMKHVLR >gi|222441559|gb|ABXX02000014.1| GENE 4 1077 - 1253 90 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHYFVVRETRARIRLPIGLRCWVYPVGYADRQNLSIGSSFITLLEQFTQLTLFPSGDN >gi|222441559|gb|ABXX02000014.1| GENE 5 1279 - 1665 239 128 aa, chain - ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 2 126 60 184 184 101 47.0 4e-22 MEQYMMYRKACCFSDAETAARILETDDVAEIKRLGRRVAGYDDHVWNGVRQIEVYEGLLA KFRQNAELGARLEVTGIALLAECAVKDRIWGIGLSMHDPARFNPSQWRGRNLLGYALMLT RRKLSRID Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:54 2011 Seq name: gi|222441558|gb|ABXX02000015.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont14.1, whole genome shotgun sequence Length of sequence - 1202 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 1 - 407 99.0 # D86187 [D:1..1513] # 16S ribosomal RNA # Bifidobacterium pseudocatenulatum DSM 20438 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:55 2011 Seq name: gi|222441557|gb|ABXX02000016.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont15.1, whole genome shotgun sequence Length of sequence - 1474 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 288 352 ## BDP_1910 ABC transporter permease 2 1 Op 2 . + CDS 346 - 1359 1239 ## COG0395 ABC-type sugar transport system, permease component Predicted protein(s) >gi|222441557|gb|ABXX02000016.1| GENE 1 1 - 288 352 95 aa, chain + ## HITS:1 COG:no KEGG:BDP_1910 NR:ns ## KEGG: BDP_1910 # Name: not_defined # Def: ABC transporter permease # Organism: B.dentium # Pathway: not_defined # 1 95 252 346 346 163 90.0 2e-39 IIKSIKLPELKGSLAITVIFSIIGSFQLFNEPSILQNMVPGNSITTYYTPNMYAYNLSFA GSQSNYAAALAITMAVITMAIAYAVQLNSMKEQMK >gi|222441557|gb|ABXX02000016.1| GENE 2 346 - 1359 1239 337 aa, chain + ## HITS:1 COG:lin1843 KEGG:ns NR:ns ## COG: lin1843 COG0395 # Protein_GI_number: 16800910 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 75 336 25 276 276 141 32.0 2e-33 MSDATIAAGTEQRLTAQELKAQEKADEKTEKERLKRVARDEKAERKRAAKSGFANVANPR RSTLLTIVCALFAVYCLFPFVYLLINATKTQADFTSTFGLGFGRTFALWDNIKTVFTYQD GIFGRWFLNTILYVVVGAGGATLLAIMGGYGLAKFRFPGRKAVFAVIIGAISVPGIALAV PQFLLFAKLNLTNTPWAMIIPSLVSTFGLYLMWIFSEQAVPTELLEAARVDGASEFRTFF QVSLPLLAPGIVTTALFTIVATWNNYFLPLIMLKDSNWYPLTIGLNQWKDQASTAGGQAI QNLVITGSLITIVPLVIAFLCLQKYWQSGLSAGAVKE Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:43:58 2011 Seq name: gi|222441556|gb|ABXX02000017.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont16.1, whole genome shotgun sequence Length of sequence - 1338 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 355 425 ## COG0582 Integrase 2 2 Op 1 . + CDS 730 - 978 107 ## 3 2 Op 2 . + CDS 979 - 1284 376 ## COG0286 Type I restriction-modification system methyltransferase subunit Predicted protein(s) >gi|222441556|gb|ABXX02000017.1| GENE 1 1 - 355 425 118 aa, chain - ## HITS:1 COG:lin0524 KEGG:ns NR:ns ## COG: lin0524 COG0582 # Protein_GI_number: 16799599 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 1 118 1 118 309 142 55.0 2e-34 MQENITSESLFCDYYAQWVRTYKEGAIRDVTMGKYRLTQSWIGKLIPELRLADMDRTAYQ QLINGYAQHHERQTTMDFHHQIKGAILDAVDEGLIPRDPTRKVIIKGKQPRIKKMKYL >gi|222441556|gb|ABXX02000017.1| GENE 2 730 - 978 107 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHYFVVRETRARIRLPIGLRCWVYPVGYADRQNLSIGSSFITLLEQFTQLTLFPSGGAVF LWKMCSHSWSRALVCRYRNEEG >gi|222441556|gb|ABXX02000017.1| GENE 3 979 - 1284 376 101 aa, chain + ## HITS:1 COG:alr0499 KEGG:ns NR:ns ## COG: alr0499 COG0286 # Protein_GI_number: 17227995 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Nostoc sp. PCC 7120 # 3 92 9 106 537 58 33.0 3e-09 MNKQQLASKIWESANKMRSKIEANEYKDYILGFIFYKFLSENELMRLKANDFTEDDLPQL TEDNPDIVEGVQDECGYFIAYDNLFSTWIKKGQRFRDFQRA Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:05 2011 Seq name: gi|222441555|gb|ABXX02000018.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont17.1, whole genome shotgun sequence Length of sequence - 1250 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 473 - 673 164 ## - Prom 694 - 753 3.8 + Prom 591 - 650 4.2 2 2 Tu 1 . + CDS 853 - 1155 284 ## BCAH187_A3979 FtsK/SpoIIIE family protein Predicted protein(s) >gi|222441555|gb|ABXX02000018.1| GENE 1 473 - 673 164 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCWSTYQINPSLDPSITIFIAVSLPFPVVADKNNMPPLTVKPIIKGVMLHSPLQLMVQCI AEVNKK >gi|222441555|gb|ABXX02000018.1| GENE 2 853 - 1155 284 100 aa, chain + ## HITS:1 COG:no KEGG:BCAH187_A3979 NR:ns ## KEGG: BCAH187_A3979 # Name: not_defined # Def: FtsK/SpoIIIE family protein # Organism: B.cereus_AH187 # Pathway: not_defined # 23 95 113 186 394 77 43.0 2e-13 MLEWLIPPALIGAAALVPDNKLKPWEFNGRHLYPHSWLVPVGKRRKVMYHNFEHYPHMLI GGTTRFGKTVFLKSLLASLLIANPDRVRFVILDFEGRSRV Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:13 2011 Seq name: gi|222441554|gb|ABXX02000019.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont18.1, whole genome shotgun sequence Length of sequence - 1094 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:14 2011 Seq name: gi|222441553|gb|ABXX02000020.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont19.1, whole genome shotgun sequence Length of sequence - 1069 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 2, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 297 247 ## BLD_1962 type I site-specific restriction-modification system R subunit 2 1 Op 2 . - CDS 284 - 685 116 ## COG0732 Restriction endonuclease S subunits + Prom 454 - 513 2.1 3 2 Op 1 . + CDS 710 - 958 107 ## 4 2 Op 2 . + CDS 959 - 1067 121 ## Amuc_1915 type I restriction-modification system, M subunit Predicted protein(s) >gi|222441553|gb|ABXX02000020.1| GENE 1 3 - 297 247 98 aa, chain - ## HITS:1 COG:no KEGG:BLD_1962 NR:ns ## KEGG: BLD_1962 # Name: hsdR # Def: type I site-specific restriction-modification system R subunit # Organism: B.longum_DJO10A # Pathway: not_defined # 1 97 1 97 1095 144 70.0 2e-33 MFYDKESDFEDDLVAVLKRHGWTDGVLEYPTEQDLIDNWASILFDNNKGIDRLNGQRLTK GEMAQILEQIETLRTPLALNSFINGKTVSIKRDNPRDE >gi|222441553|gb|ABXX02000020.1| GENE 2 284 - 685 116 133 aa, chain - ## HITS:1 COG:SA0392 KEGG:ns NR:ns ## COG: SA0392 COG0732 # Protein_GI_number: 15926110 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 1 101 287 386 403 77 39.0 6e-15 MRMWQGAVDASRYDGIVSPAYVVARPNSEVYARFFARLLRQPMLLKQYQQVSQGNSKDTQ VLKFDDFASIGISMPASENEQRQIGGFFDRLDSLITLHQRKYCGVASWMLGVALVRLGSE SDGAFGEMKHVLR >gi|222441553|gb|ABXX02000020.1| GENE 3 710 - 958 107 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHYFVVRETRARIRLPIGLRCWVYPVGYADRQNLSIGSSFITLLEQFTQLTLFPSGGAVF LWKMCSHSWSRALVCRYRNEEG >gi|222441553|gb|ABXX02000020.1| GENE 4 959 - 1067 121 36 aa, chain + ## HITS:1 COG:no KEGG:Amuc_1915 NR:ns ## KEGG: Amuc_1915 # Name: not_defined # Def: type I restriction-modification system, M subunit # Organism: A.muciniphila # Pathway: not_defined # 1 36 1 36 853 76 100.0 3e-13 MNKQQLASKIWESANKMRSKIEANEYKDYILGFIFY Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:24 2011 Seq name: gi|222441552|gb|ABXX02000021.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont20.1, whole genome shotgun sequence Length of sequence - 1068 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 31 - 210 309 ## BDP_1720 hypothetical protein - 5S_RRNA 366 - 477 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. 2 2 Tu 1 . + CDS 847 - 1068 217 ## PROTEIN SUPPORTED gi|121587643|ref|ZP_01677406.1| cell wall-associated hydrolase - 5S_RRNA 984 - 1066 93.0 # AM773717 [D:3446..3948] # 5S ribosomal RNA # Leuconostoc gasicomitatum # Bacteria; Firmicutes; Lactobacillales; Leuconostoc. Predicted protein(s) >gi|222441552|gb|ABXX02000021.1| GENE 1 31 - 210 309 59 aa, chain + ## HITS:1 COG:no KEGG:BDP_1720 NR:ns ## KEGG: BDP_1720 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 57 376 432 438 103 87.0 2e-21 MMFPEEVVPYEWETIREAALEALGRSDELVAMYQERLDDTYDPNTALNHLKLHAWLNQQ >gi|222441552|gb|ABXX02000021.1| GENE 2 847 - 1068 217 74 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121587643|ref|ZP_01677406.1| cell wall-associated hydrolase [Vibrio cholerae 2740-80] # 1 73 1 73 144 88 63 2e-18 MLSAVIPPERSQPAMPLARQPAYQRSVHPGPLVLWAGLLRIPTSAEDRDQTVSRRSEPSS RAALIGEQPNPWDL Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:27 2011 Seq name: gi|222441551|gb|ABXX02000022.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont21.1, whole genome shotgun sequence Length of sequence - 1016 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 379 - 490 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 315 - 374 1.7 1 1 Tu 1 . + CDS 615 - 950 229 ## BDP_2217 hypothetical protein Predicted protein(s) >gi|222441551|gb|ABXX02000022.1| GENE 1 615 - 950 229 111 aa, chain + ## HITS:1 COG:no KEGG:BDP_2217 NR:ns ## KEGG: BDP_2217 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 35 92 1 58 83 117 91.0 2e-25 MIPPVTGSPGTLGGSQEFQGSFLPLSDGGIDWGTMHYFVPKRCVESNKIMYRDKATARQA ADQSWRERGTELWVYRCEFCGTWHLTHRDPQALKRRYQSLLQYLLISFRYC Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:30 2011 Seq name: gi|222441550|gb|ABXX02000023.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont22.1, whole genome shotgun sequence Length of sequence - 1079 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 350 102 ## BAD_0842 hypothetical protein - Term 232 - 296 -0.9 2 2 Tu 1 . - CDS 345 - 1007 517 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains Predicted protein(s) >gi|222441550|gb|ABXX02000023.1| GENE 1 3 - 350 102 115 aa, chain + ## HITS:1 COG:no KEGG:BAD_0842 NR:ns ## KEGG: BAD_0842 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 37 109 171 243 1148 127 83.0 2e-28 RNPETPETDKTDYAAATSPGTEPSTHDSWTSTATHPFTGPCSKKTYPECTTHTNAAAFHA SIWQDMGLSADACRLLHKIQSADAPSKLDDIFKQGVLDIPESIRLAHETSTTSSS >gi|222441550|gb|ABXX02000023.1| GENE 2 345 - 1007 517 220 aa, chain - ## HITS:1 COG:Cgl1317_2 KEGG:ns NR:ns ## COG: Cgl1317_2 COG0749 # Protein_GI_number: 19552567 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Corynebacterium glutamicum # 1 217 302 518 569 274 61.0 1e-73 MAATGRLSSVDPNLQNIPNRDPAGREIRSAFVPGEGFESLLSSDYSQVELRIMADLSGDE ALIEAFRSGRDFHKYVASLVYGVPVDEITPDQRSHVKAMSYGLAYGLSTYGLSQQLGIKP GEAESLKRQYFATFGKVHEYLESLVSSAREKGYTETIYGRRRYFPGLKSPNRAVRDAAER AALNAPIQGSAADIMKIAMIRADDALREAGLASRIIFADS Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:33 2011 Seq name: gi|222441549|gb|ABXX02000024.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont23.1, whole genome shotgun sequence Length of sequence - 865 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 864 966 ## COG3451 Type IV secretory pathway, VirB4 components Predicted protein(s) >gi|222441549|gb|ABXX02000024.1| GENE 1 3 - 864 966 287 aa, chain - ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 74 235 201 371 617 73 31.0 6e-13 QLRDELRSTNQRLVDSIIVIGVSAASQEELEVACRNVKAKVNAQSCTAESLKFMQMEGLT AELPLGNNPLPMKRTLTTNSAAILIPFTTQEVFEPHGLFYGSNARSGNPILADRRSHMNS NGFVLGTSGGGKSFTVKQEIAGMFLNRDDEVIVIDPEREYLALAAAFGGQIIQISAGTGT RVNPMDIVLEDDSASDPVKDKTNNVVSMIGALIGGIDGLDPLQKGLVDQCVSNLYTRYRN QGGGVVQPTLQDLHDELQAGGDQVSRYLADALNPYITGSMSGFNGQT Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:34 2011 Seq name: gi|222441548|gb|ABXX02000025.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont24.1, whole genome shotgun sequence Length of sequence - 842 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 689 438 ## COG4721 Predicted membrane protein Predicted protein(s) >gi|222441548|gb|ABXX02000025.1| GENE 1 2 - 689 438 229 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 15 102 14 101 201 69 40.0 6e-12 MIEEKQSSVVRKHNNKWRVVDIVVAAIIAVASGVIFWGWDIVCTAPLALFGAVTPGFEGL LNAFWLFAGPLAAIIVRKPGAALFAETLAAALELTMGNQWGVGGSLIVDGHHIAGALRHA HCLAVLQHVDELADKNLHVFARFVAECGAHGHHAADIAVMVGTQHVNGDVCRIVVTMTLV AIVSNISCEIRVVAVGLDNHTILVVTMLGGFEPGCAILFVNVAAFTQIG Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:34 2011 Seq name: gi|222441547|gb|ABXX02000026.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont25.1, whole genome shotgun sequence Length of sequence - 865 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 369 - 428 2.3 1 1 Tu 1 . + CDS 452 - 863 112 ## ABC1368 hypothetical protein Predicted protein(s) >gi|222441547|gb|ABXX02000026.1| GENE 1 452 - 863 112 137 aa, chain + ## HITS:1 COG:no KEGG:ABC1368 NR:ns ## KEGG: ABC1368 # Name: not_defined # Def: hypothetical protein # Organism: B.clausii # Pathway: not_defined # 2 135 103 239 791 106 43.0 2e-22 MMDSYTELSPSGNGVHIIVKGELPIQKGRPKKSRNRFGNIPVRTIFHIYRKTRRTYMKLL NEPMNLHCFLKKYFEDKKPEKKTVTNTFSHISNLSNSELWEKMFNSRNGQNIRSLFEGNL INDDHSSTDLALCNHPW Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:38 2011 Seq name: gi|222441546|gb|ABXX02000027.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont26.1, whole genome shotgun sequence Length of sequence - 840 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 516 - 627 96.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:38 2011 Seq name: gi|222441545|gb|ABXX02000028.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont27.1, whole genome shotgun sequence Length of sequence - 807 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 1 - 33 2.0 1 1 Op 1 . - CDS 35 - 397 438 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 2 1 Op 2 . - CDS 422 - 664 230 ## gi|225352874|ref|ZP_03743897.1| hypothetical protein BIFPSEUDO_04511 Predicted protein(s) >gi|222441545|gb|ABXX02000028.1| GENE 1 35 - 397 438 120 aa, chain - ## HITS:1 COG:CAC2621_1 KEGG:ns NR:ns ## COG: CAC2621_1 COG3757 # Protein_GI_number: 15895879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Clostridium acetobutylicum # 1 111 1 108 183 70 41.0 6e-13 MKGFDIYHGSGNVNFKRAHDAGYRIAMVKATEGKTFKDPKFATNVKAAKAAGFKVGAYHF ARFTSPAVARQEARYFYGAVKGYLKYMDEPLALDLETNHAGNQLVASMQAFFRAEKAYRS >gi|222441545|gb|ABXX02000028.1| GENE 2 422 - 664 230 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352874|ref|ZP_03743897.1| ## NR: gi|225352874|ref|ZP_03743897.1| hypothetical protein BIFPSEUDO_04511 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04511 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 80 48 127 127 125 100.0 1e-27 MQAVETGQLRIEKTLLVEGKEQKKLINQQREEQQELLNRLLEHTLNIRKITAIKKWDLAL ALFGAGGLIYAVISLLEKFL Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:45 2011 Seq name: gi|222441544|gb|ABXX02000029.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont28.1, whole genome shotgun sequence Length of sequence - 723 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 6 - 65 2.3 1 1 Op 1 . + CDS 163 - 375 251 ## gi|160946096|ref|ZP_02093310.1| hypothetical protein PEPMIC_00045 + Prom 378 - 437 3.1 2 1 Op 2 . + CDS 468 - 647 265 ## gi|160946097|ref|ZP_02093311.1| hypothetical protein PEPMIC_00046 Predicted protein(s) >gi|222441544|gb|ABXX02000029.1| GENE 1 163 - 375 251 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946096|ref|ZP_02093310.1| ## NR: gi|160946096|ref|ZP_02093310.1| hypothetical protein PEPMIC_00045 [Parvimonas micra ATCC 33270] hypothetical protein BIFPSEUDO_04512 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein PEPMIC_00045 [Parvimonas micra ATCC 33270] hypothetical protein BIFPSEUDO_04512 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 70 1 70 70 137 100.0 3e-31 MIEHPDITRTIRMGYPEREQKHCGFDFFGNECFEGEEILVLDDEFFVKQELSNDAISILR YFGASSKIAK >gi|222441544|gb|ABXX02000029.1| GENE 2 468 - 647 265 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946097|ref|ZP_02093311.1| ## NR: gi|160946097|ref|ZP_02093311.1| hypothetical protein PEPMIC_00046 [Parvimonas micra ATCC 33270] hypothetical protein PEPMIC_00046 [Parvimonas micra ATCC 33270] # 1 50 20 69 202 80 92.0 3e-14 MNELQQAELQEWEEQPAEERQHFEITNMESLTWAFRKLAAYKAKEMKLTKNCTAGTATN Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:44:55 2011 Seq name: gi|222441543|gb|ABXX02000030.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont29.1, whole genome shotgun sequence Length of sequence - 701 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 132 - 701 1008 ## gi|225352880|ref|ZP_03743901.1| hypothetical protein BIFPSEUDO_04515 Predicted protein(s) >gi|222441543|gb|ABXX02000030.1| GENE 1 132 - 701 1008 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352880|ref|ZP_03743901.1| ## NR: gi|225352880|ref|ZP_03743901.1| hypothetical protein BIFPSEUDO_04515 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04515 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 189 1 189 189 329 99.0 7e-89 ETFTGWGFASNDGDVPVDPNAEVTGNWAVYPMYKNAEKKDDTTQNVVSFYAGTDKLIQTV GYYAKDKVKFSQYALGIQAPAVEGKIFTGWGFASNDGDVPVDPDMVVTGNWAVYAMYKDA PTDDSKKDDSKPADTTKKNDTKSNTKKTVAQKIKKAVLGNTGATVGGVAVFAVLALLGFA GITVLRKRA Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:45:06 2011 Seq name: gi|222441542|gb|ABXX02000031.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont30.1, whole genome shotgun sequence Length of sequence - 622 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 108 64 ## 2 1 Op 2 . + CDS 148 - 450 311 ## gi|160946083|ref|ZP_02093298.1| hypothetical protein PEPMIC_00033 Predicted protein(s) >gi|222441542|gb|ABXX02000031.1| GENE 1 1 - 108 64 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no IYAKAKKQMGPRKLILKIYYAGCYRTSCWLIIWLG >gi|222441542|gb|ABXX02000031.1| GENE 2 148 - 450 311 100 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946083|ref|ZP_02093298.1| ## NR: gi|160946083|ref|ZP_02093298.1| hypothetical protein PEPMIC_00033 [Parvimonas micra ATCC 33270] hypothetical protein BIFPSEUDO_04516 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein PEPMIC_00033 [Parvimonas micra ATCC 33270] hypothetical protein BIFPSEUDO_04516 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 100 1 100 100 163 100.0 4e-39 MGVRLEITDQETGKTQVFKKDFVSFRKTREAMKLQVDIQEMNELETFDAMLDFVVDLFED KDLTPDYILDNLPAESGVNILTDVLEQVMGVGKDDGTGKK Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:45:17 2011 Seq name: gi|222441541|gb|ABXX02000032.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont31.1, whole genome shotgun sequence Length of sequence - 534 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:45:17 2011 Seq name: gi|222441540|gb|ABXX02000033.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont32.1, whole genome shotgun sequence Length of sequence - 522 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 265 - 376 95.0 # CP001095 [R:2539482..2539597] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:45:18 2011 Seq name: gi|222441539|gb|ABXX02000034.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont33.1, whole genome shotgun sequence Length of sequence - 523 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 211 87 ## + Term 402 - 446 2.5 Predicted protein(s) >gi|222441539|gb|ABXX02000034.1| GENE 1 2 - 211 87 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RRAVWVKTACLVFQICKTNQDSVSLTLVNHHLTHHNPTPLCHWSHPECHLYRPMTSLTHH VPQVAKDRR Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:45:24 2011 Seq name: gi|222441538|gb|ABXX02000035.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont34.1, whole genome shotgun sequence Length of sequence - 524 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jun 28 20:45:24 2011 Seq name: gi|222441537|gb|ABXX02000036.1| Bifidobacterium pseudocatenulatum DSM 20438 B_pseudocatenulatum-1.0.1_Cont35.1, whole genome shotgun sequence Length of sequence - 508 bp Number of predicted genes - 0