Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:36:37 2011 Seq name: gi|294972856|gb|ADNU01000001.1| Brevibacterium mcbrellneri ATCC 49030 contig00001, whole genome shotgun sequence Length of sequence - 23005 bp Number of predicted genes - 24, with homology - 23 Number of transcription units - 16, operones - 6 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 466 - 690 110 ## PPA1598 Bro family antirepressor 2 2 Tu 1 . + CDS 878 - 1906 688 ## COG3786 Uncharacterized protein conserved in bacteria + Term 1914 - 1954 0.2 + Prom 1925 - 1984 2.0 3 3 Tu 1 . + CDS 2162 - 2548 443 ## COG5646 Uncharacterized conserved protein + Term 2659 - 2712 6.8 4 4 Tu 1 . - CDS 2745 - 2927 56 ## + Prom 2641 - 2700 1.8 5 5 Tu 1 . + CDS 2888 - 3520 723 ## cauri_2170 hypothetical protein - Term 3367 - 3410 -0.4 6 6 Tu 1 . - CDS 3630 - 4616 1087 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 7 7 Op 1 3/0.000 - CDS 4739 - 5740 737 ## COG0798 Arsenite efflux pump ACR3 and related permeases 8 7 Op 2 . - CDS 5847 - 6266 432 ## COG0394 Protein-tyrosine-phosphatase - Prom 6307 - 6366 1.8 9 8 Tu 1 . + CDS 6484 - 9015 2646 ## COG2374 Predicted extracellular nuclease + Term 9053 - 9094 10.3 - Term 9041 - 9082 10.3 10 9 Op 1 . - CDS 9125 - 9934 703 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 11 9 Op 2 . - CDS 9952 - 10350 179 ## gi|295394282|ref|ZP_06804512.1| conserved hypothetical protein 12 10 Tu 1 . + CDS 10201 - 10464 197 ## gi|295394280|ref|ZP_06804510.1| endonuclease/exonuclease/phosphatase + Term 10531 - 10561 -0.7 13 11 Op 1 . - CDS 10445 - 10900 373 ## COG3189 Uncharacterized conserved protein 14 11 Op 2 . - CDS 10905 - 12137 974 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 15 11 Op 3 . - CDS 12134 - 12760 509 ## gi|295394285|ref|ZP_06804515.1| possible threonine dehydratase + Prom 12811 - 12870 3.0 16 12 Op 1 . + CDS 12916 - 14070 603 ## COG2856 Predicted Zn peptidase 17 12 Op 2 . + CDS 14070 - 14339 226 ## PSPPH_5056 hypothetical protein 18 12 Op 3 . + CDS 14240 - 14551 172 ## CT2254 hypothetical protein 19 13 Tu 1 . + CDS 14675 - 15928 1055 ## COG0523 Putative GTPases (G3E family) + Term 16117 - 16152 -0.3 20 14 Op 1 1/0.000 - CDS 15991 - 16770 628 ## COG0789 Predicted transcriptional regulators 21 14 Op 2 . - CDS 16798 - 17607 567 ## COG5504 Predicted Zn-dependent protease - Prom 17708 - 17767 2.1 + Prom 17798 - 17857 3.1 22 15 Tu 1 . + CDS 17990 - 19435 872 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - Term 19435 - 19471 2.3 23 16 Op 1 . - CDS 19560 - 21191 1034 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 24 16 Op 2 . - CDS 21260 - 22717 1609 ## COG0531 Amino acid transporters Predicted protein(s) >gi|294972856|gb|ADNU01000001.1| GENE 1 466 - 690 110 74 aa, chain + ## HITS:1 COG:no KEGG:PPA1598 NR:ns ## KEGG: PPA1598 # Name: not_defined # Def: Bro family antirepressor # Organism: P.acnes # Pathway: not_defined # 2 56 3 57 253 90 69.0 1e-17 MTALQAFTNHEFGTIRTITSGGQVLFCGRDVANALGYQDPANAVKLHCKGVANYHPPCNA WWRPAGQVQSSLMC >gi|294972856|gb|ADNU01000001.1| GENE 2 878 - 1906 688 342 aa, chain + ## HITS:1 COG:CAC3676 KEGG:ns NR:ns ## COG: CAC3676 COG3786 # Protein_GI_number: 15896908 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 148 334 111 300 308 90 32.0 4e-18 MNTLPHRSVSLAVALCALFALLTPVIAATPANAAPPRQATSQINAAAKKHAKKLGKATSS IRCGLRGGGCYQKFQNGSIHWSPKTGAHATWGAIRWIWQNNNWERGKYGYPTGSAWIGND GKLRQKFQRGTITTGVLAYGLPHGIKPKGGRQIVIAHTSARSSKTGTVELWELRNDERWH RTHTFKDARFGYKGLATASDKREGDGKTPMGQYRIPFTFGTKAKPKGTRIEYRRADHNDQ WCSRSGSLHYNTWMSVPNRSCPAKDAEVFSTIPQYSHVAVVDYNSARKAGRGSAIFVHKH GKGSTAGCVSVTGKQMVTLVTWLRPEQNPRIVIAPRGELKNQ >gi|294972856|gb|ADNU01000001.1| GENE 3 2162 - 2548 443 128 aa, chain + ## HITS:1 COG:BS_ydhG KEGG:ns NR:ns ## COG: BS_ydhG COG5646 # Protein_GI_number: 16077642 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 3 123 1 121 123 111 42.0 3e-25 MALKTLDEFLGTIPQGDKRDRMVEVLDWVASTYPELELRIAWNQPMFTHHGTFIIGFSAA SKHMAMAPERHTMIHFEDFMKSRGTDHGKMFARQPWAKPFDYELATAFTDYQLETKKDVT SFWMPKEG >gi|294972856|gb|ADNU01000001.1| GENE 4 2745 - 2927 56 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGDKPSSAWHVKSYFDLTLGAWLSVALLPNTSNWISLSCGGLLFVQLLYTPELFWTCSVE >gi|294972856|gb|ADNU01000001.1| GENE 5 2888 - 3520 723 210 aa, chain + ## HITS:1 COG:no KEGG:cauri_2170 NR:ns ## KEGG: cauri_2170 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 2 209 3 211 213 176 43.0 4e-43 MTSHAMLNSAYPPSEAIYFPQTIEQDIALMLCHGATYDEVYTYYTQDPEDDPWQDRETNI DPQPESLEELIRMVSDEYKRAVPRASEDATKIASLEDAFKQRNLAWSFDEGWDKGEAAQD GVEKAREINANGYAYCTMQDVDGLIHTGTLYIGYSSTNAQEEETRTIGHRVCEVLKEQGL NPTWDGNTGARIVCSDLRYEVALADDFPSQ >gi|294972856|gb|ADNU01000001.1| GENE 6 3630 - 4616 1087 328 aa, chain - ## HITS:1 COG:MT0240 KEGG:ns NR:ns ## COG: MT0240 COG1735 # Protein_GI_number: 15839610 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Mycobacterium tuberculosis CDC1551 # 15 327 25 338 345 392 60.0 1e-109 MNAIDQSSATKMVPTVTGSIPVEQLGKTLAHEHVFVVGEEFRQNYQADWDEEEKIAQAVR DLNELKSLGIDSILDPTVVGLGRYIPRIQRIAEQIDLNIVVATGIYTYNEVPFQFHYSGP GLLFDVPEPMTEMFVNDIENGIAGTGVKAGFLKCAIEEQGLTPGVERVMRAVAQAHVRTG APITVHTNVHNRSGLEAQRVLCEEGADLTKVVIGHSGDSTELDYLMELADAGSILGMDRF GLDVLLPFEQRVDTVAELAKRGYADRMVLAHDASCFIDWFDPQAKAQAVPNWNYRHISED VLPALLERGVSEEQIQTMLVDNVRRYFS >gi|294972856|gb|ADNU01000001.1| GENE 7 4739 - 5740 737 333 aa, chain - ## HITS:1 COG:Cgl0263 KEGG:ns NR:ns ## COG: Cgl0263 COG0798 # Protein_GI_number: 19551513 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenite efflux pump ACR3 and related permeases # Organism: Corynebacterium glutamicum # 1 328 16 343 345 408 67.0 1e-114 MAVGVALSVWVPQSSDLLNRFKISDISLPIALGLLVMMYPPLAKVRFDKAREIARDRKLM VLSLLLNWVAGPLLMFVLAWVFLANEPELRTGLIIVGLARCIAMVLVWSDLSCADREATA VLVAINSVFQLLMFSVLGWFYLQILPGWLGLDTASADFSFWAIVKSVLIFLGVPLALGVL SRVLGERLQGREWFENHFIPRISPLAMLGLLYTIVVLFCLQGTQVLNNPLSVARVAVPLL VYFVGMFAVALIASRASGMNYAQSASTAFTAAGNNFELAIAVTIGTFGATSPQALAGTIG PLVEIPVLVGLVYVMRALGPRLFPGDSSVPTPR >gi|294972856|gb|ADNU01000001.1| GENE 8 5847 - 6266 432 139 aa, chain - ## HITS:1 COG:Cgl0264 KEGG:ns NR:ns ## COG: Cgl0264 COG0394 # Protein_GI_number: 19551514 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Corynebacterium glutamicum # 5 133 3 128 129 128 53.0 4e-30 MKKPSVLFVCVKNGGKSQMAAALARKKAGNAIDVFSGGTQPGNSLNEESRKSVEAVGASF KGEYPKPIDPDLLRSVDRVVVVGGTAQVDQVEGMRGSVETWDIDEPSLRGIEGEERMTLI RDEISKRVDALIAQLTSHC >gi|294972856|gb|ADNU01000001.1| GENE 9 6484 - 9015 2646 843 aa, chain + ## HITS:1 COG:Cgl2538_1 KEGG:ns NR:ns ## COG: Cgl2538_1 COG2374 # Protein_GI_number: 19553788 # Func_class: R General function prediction only # Function: Predicted extracellular nuclease # Organism: Corynebacterium glutamicum # 216 842 185 816 816 404 42.0 1e-112 MSHTQTRSLFAVLALLIASVALPVLPALAANKIYISEIAYADNTGDFIEIAAPAGTKLDG WKVGTVTRGGTVQDATNVRTLANTVVGDSGAVAIEIPITNTVKSGAQTDGAYGASAFLIS PEGKIASFDTIGGNAGKPGVEAGSSAHTPEVLSGNRATSTGATAGKGKSIALINGTWVAG APTPGTLPEGAGDPNPSEPTPEPTDEPTAEPTSEPTPEPTTEPTEEPTPEPTDKPTDPAE PGDVTPIRDIQGTSDKSPMVGKTVTTRGIVTAAYPTGGLNGYYIQTPGTGDAEHDLGGPS DGIFVYSSDTVKDVKRGDFVQVNGQVSEFYGLTQISVKAGGMKQLKEAAPEVKPYEGEIP TGDENRESLEGMLVQPTGDITVTDNYSTNKFGEVALVNGKEALYQPTDKFRPGSKEATDL AKRNSERTYLLDDGSTLNFLTKAQGTPVSYLDNEQPVRVGAEVTFTSAAVFSYGHEAWRL QPVGALTDAEAGVDEPAKFGNDRPASPELSGGKLASFNVLNFFPTTGDQLKGCSYYKDRE GNPVTVNGGCDARGAANLESLSRQQIKILNAINQMDVAVLSLEELENSEKFGKNRDFAIS YLVRQLNKQAGYGKWAAVTSPKSVPATGDDVIRTGFIYQPAHADTEGTSEILDNPAFSNA RAPLAQEFVLKKDGKTTGESFVAVVNHFKSKGSGKGPGNEDSGDGQGNSNADRVKQAKAV VTFADAMKKKAQTDNVFLLGDFNSYTQEDPMQEFYKAGYVDAGEKFEAEPTYVFGGQLGS LDHVLANDAAAKGLKGAYTWTINSRESVALEYSRYNYNVTNFYDPSPFRSSDHDPTIVDF DLK >gi|294972856|gb|ADNU01000001.1| GENE 10 9125 - 9934 703 269 aa, chain - ## HITS:1 COG:AF1641 KEGG:ns NR:ns ## COG: AF1641 COG1024 # Protein_GI_number: 11499231 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Archaeoglobus fulgidus # 24 266 12 254 254 210 48.0 2e-54 MTNEAHAQKPTTTTTVRVAVENTVATVLIDSLKTRNALSVPVMTDLIDVFTKLGERSDVH AIILKTAGHVFSSGHDLKEIRGADLATQQHTFDLCSQLMLLIQRIPQPVIAQVQGVATAA GCQLVATCDLAVAATSAKFGTPGVKIGLFCSTPQVALSRAVPRKTALRMLLTGELLDANE ALNFGLVSHVVSEEELEDATLAVALSVAKASSATVAVGKRGFYEQINLSTEDAYAHMAQV MANNAVGHDAQEGIDAFLTKREPQWQNRL >gi|294972856|gb|ADNU01000001.1| GENE 11 9952 - 10350 179 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394282|ref|ZP_06804512.1| ## NR: gi|295394282|ref|ZP_06804512.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 132 15 146 146 215 99.0 9e-55 MGPGQVANRTSPTGTDHAASLVELLHGVFLRVGVEVTQQEHVVGLCLLLHHELLRQWSGR VAVEPGVGWSVEIPADGPVARIGARSMTADGLPVFKEIGRGVTVLTGHGTLGMTLAPFTA RRVFDLLSTSAE >gi|294972856|gb|ADNU01000001.1| GENE 12 10201 - 10464 197 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394280|ref|ZP_06804510.1| ## NR: gi|295394280|ref|ZP_06804510.1| endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri ATCC 49030] endonuclease/exonuclease/phosphatase [Brevibacterium mcbrellneri ATCC 49030] # 1 34 727 760 843 67 91.0 3e-10 MKKKAQTNNVFLLGDFNSYTQEDTMQEFYKAGCVVRAGWASPVGYLARPHSDGSRLATCD DLGHFLAEVVAVSAECLGEAVATKCVR >gi|294972856|gb|ADNU01000001.1| GENE 13 10445 - 10900 373 151 aa, chain - ## HITS:1 COG:Cgl0782 KEGG:ns NR:ns ## COG: Cgl0782 COG3189 # Protein_GI_number: 19552032 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 4 148 3 117 117 105 46.0 3e-23 MKRVETAKIHDLRSGDVDYRGTEILVDRLWPRGVKKDSVNLLAHLPKVAPSPELRKWFGH DPDKFEEFSQRYCNELDQQLAELNETQRPHQTNTNAVPRNIDVPDDDLGQLSLLIDTVRT SDTPVVLVYAAKDRTHNHANVLADWLNEHIS >gi|294972856|gb|ADNU01000001.1| GENE 14 10905 - 12137 974 410 aa, chain - ## HITS:1 COG:mll6285 KEGG:ns NR:ns ## COG: mll6285 COG0665 # Protein_GI_number: 13475257 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Mesorhizobium loti # 10 403 2 393 411 136 32.0 7e-32 MSPTTPSPQSIIIVGGGIVGSYLAYECALAGWDVDVFDPQPEPAASYANAGILALSYAQP MSNPRALFTGAKAVLAGGEGIELATPLTPRTLGWLSKFAWASRPGHAKRHIRTIYNMART SVDLYAELEQRESTDLHLRRTGWLYVATSPQALRAQAREAATVAPAGVRSQLLDATETRA HEPALASDIVGGVFYPDDVSFHPGHVTTTVRNAAQSRGARFHQATVTSGRAASGAGVASV ETDLGEHFRARHVVIAAGAQSDEVARLFGGRVAVEPGVGWSVEIPTDGPVASRALMSIDD HVVINPADTRVRLSGGMRFGGEPRTAPTPAGVDALVRAATRLVPAVGELDREGAVARIGA RPMTADGLPVFKEIGRGVTVLTGHGTLGMTLAPFTAQRVFDLLSKATRLD >gi|294972856|gb|ADNU01000001.1| GENE 15 12134 - 12760 509 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394285|ref|ZP_06804515.1| ## NR: gi|295394285|ref|ZP_06804515.1| possible threonine dehydratase [Brevibacterium mcbrellneri ATCC 49030] possible threonine dehydratase [Brevibacterium mcbrellneri ATCC 49030] # 1 208 1 208 208 346 100.0 5e-94 MGLTTSLLLTTEPVTPQQLEAWGLTPTQEKGDLWTAFHDPANQFFAVTRPGDWTILWDPE MLIAPHFETDSITLPGTWHVASTVSSMSFVDYRVFVDGTLVRHLLAGDEELNEGTPVVDE SAFVFREEGGEEEPAEVDGDLLIQELPRAVGAVGSGDDVFEVEGQYFTYQSTAPDPNAEP LADPQGGGDLGGGEPQKRSFFGKLFGKK >gi|294972856|gb|ADNU01000001.1| GENE 16 12916 - 14070 603 384 aa, chain + ## HITS:1 COG:RSc3252 KEGG:ns NR:ns ## COG: RSc3252 COG2856 # Protein_GI_number: 17547969 # Func_class: E Amino acid transport and metabolism # Function: Predicted Zn peptidase # Organism: Ralstonia solanacearum # 11 369 7 356 376 149 33.0 8e-36 MSVRVDVQPRLLEWAVERAGWDRETTIDRVPSFSDWVAGVKKPTLKQLEKFARDTHAPLG LMFLPEPPDETVPIPDMRTFGNKQVTRPSADLLDTIYLCQDRQDWYRTYVQTNDVEPPNL IPHVTTATPATVVARHMREKLDLPSLGHVASSRQQTIRYLIDRIEGLGVLVMINGVVGTN THRKLNPQEFRGFALADPLAPLIFVNGADTKAAQIFTLIHEFAHIILGSSTLSDASTHLE NGVHEEEWCNQVAAEVLVPLDALQHDFSGEESVEELERLSNTFQVSTLVILKRLFDAHLI TWEEYRARYVTEQKRIGEILASQKPSKAGGNFYNTQLIRLSRTFASAVIASAMEGSTAYR QAYQLLGTKERSTFDTMASELGIA >gi|294972856|gb|ADNU01000001.1| GENE 17 14070 - 14339 226 89 aa, chain + ## HITS:1 COG:no KEGG:PSPPH_5056 NR:ns ## KEGG: PSPPH_5056 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae_phaseolicola # Pathway: not_defined # 4 78 1 75 159 77 48.0 2e-13 MYLLDSNVFIEAKNRYYPADIAPGFWTWLGLVHQQSIACSIEAVRSELLVGEDELAEWAD THASFFKPIDIQATSASFQPGHSHRIANP >gi|294972856|gb|ADNU01000001.1| GENE 18 14240 - 14551 172 103 aa, chain + ## HITS:1 COG:no KEGG:CT2254 NR:ns ## KEGG: CT2254 # Name: not_defined # Def: hypothetical protein # Organism: C.tepidum # Pathway: not_defined # 18 102 79 161 161 75 42.0 9e-13 MGRHPRLILQTNRHPSHFRELSTWAQSQNCKPVAINQFTNNHADYLLIAYAMARGYTVAT MEKSQPGARRRILIPDVCKAMKVNTVDTFGMLRKTGARLILQP >gi|294972856|gb|ADNU01000001.1| GENE 19 14675 - 15928 1055 417 aa, chain + ## HITS:1 COG:SMc03799 KEGG:ns NR:ns ## COG: SMc03799 COG0523 # Protein_GI_number: 15966935 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Sinorhizobium meliloti # 50 233 6 187 329 114 36.0 3e-25 MTHTNQGHDSRSGTPAGTPADPTPTNTSAGSLAETPATSPTSANLTHVRSPVPVILLTGY LGAGKTSVLNNLLRHPSARVGVIVNDFGELNIDAGLISNQVNEPVAISGGCICCLTDAGG LEDALAAMAAPKHQLDAIVVEASGFAEPLTLARLVSRWGRGRFRLGGVIDVIDACEHFST VDQGGIPPLRYAVATLVLVNKLDLIPPDQRDAHMSKIRDRVHSRNPRAHVVSTVLGRIDP HLLFDGSPEPSTKTPTTSAGETNPANPEWQQTELPLHDLFMASYRERDEARLASIDAPSH DHTHAHSVTVEVPGAVNAEVILNFLEDLPPGAYRAKGFVTVPTGRGTQAFVVQAVGPNVF ASRAKDTVAGSALVVIGADLDEHTAEVATRTALAELTADGPASPGLERLRTLVRLHS >gi|294972856|gb|ADNU01000001.1| GENE 20 15991 - 16770 628 259 aa, chain - ## HITS:1 COG:BH0408 KEGG:ns NR:ns ## COG: BH0408 COG0789 # Protein_GI_number: 15612971 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 188 1 187 255 82 32.0 7e-16 MEWTVKELAERAGISGRALRYYHRIGLLQPDRVGSNGYRYYRSESVARLQHILLLRDTGM ALTEIATVLDAQDTPNAEIEALQVHLRRLETDRQTLERRITAVQHTLKMRREGRAPQMDV MLQGFNDDYEAEVVERWGRDAFEASNQWWHGKSVREQQTWKADTEALLARWRELQEAGHE PDSTAAQEQATAHMNWFAQIPGTPTHSGDKEKSTAMVLGVADQYESNRDFHLTFGSEAAA RFAADALRNHIRHLPEHRG >gi|294972856|gb|ADNU01000001.1| GENE 21 16798 - 17607 567 269 aa, chain - ## HITS:1 COG:BS_yjfC KEGG:ns NR:ns ## COG: BS_yjfC COG5504 # Protein_GI_number: 16078278 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted Zn-dependent protease # Organism: Bacillus subtilis # 9 256 51 293 309 104 29.0 2e-22 MAGMYHFIPDGLDMASVHRQNFGFDWENTTDQLHEGLRMLVEADAWRRVAGALEAGVAAL QDADPSVIVPDLKVLLLLGDPTNDHFLNEVQGLSGFGGISGYIAITVWPTQRVLDRLEAI AVHELHHNVRYSPGGIVWNPNTVTVGEHIISEGLADTFAAELYGDTGYTHFVADATRSDD QVLAKVATGLDITGMQDFAAWVLGDATAQRFGGSPVGLPTGAGYAAGARLVAAYVEAEGT TAAQNVRTPAAEILLQALPRLGLAPSGRG >gi|294972856|gb|ADNU01000001.1| GENE 22 17990 - 19435 872 481 aa, chain + ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 1 409 1 418 563 210 33.0 5e-54 MDTERLESIVHTLRLVGTDNQPTEVKSNVGKSIRETLSAFANANGGLIILGLDESNGFLP VEGFDSAKAQDALETRCTQTTPPVRPLIDTVPFEDSLVVVAEVNEMTSEDKPCYVTDQGK YGGSYIRVGDGDIRLTQYEVDRLIEERVQPKWDEQPVPEAQLEDLHSDTVNAYMAVQRER RPKTFNGGTETAMKRLRILKDGHPTLASLLVMGEYPQEFYPRLTVTFASFPGTTKGSVTE GIRLLDSRTLTGTIPELVDEGIEVVKNNMRTAALIGEKYRSDLPDYPPIAVREALVNALM HRDYSPYAQGSQVQINMFVDRLEITSPGGLYGGVTVRNLGEPGVSSTRNQRLSSFLEDVK FHTEGGGAGVVAENRGTGIAVIQRSLADARMPPPEYINRLDSFTIVFHRRRVAEKERYAS AFDQVLTALKGQASASTSELVKSTKLSRTAVQKAVNELIAEDVVERTEPLRSPRQRYRIK T >gi|294972856|gb|ADNU01000001.1| GENE 23 19560 - 21191 1034 543 aa, chain - ## HITS:1 COG:PAB0087 KEGG:ns NR:ns ## COG: PAB0087 COG1680 # Protein_GI_number: 14520356 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Pyrococcus abyssi # 43 241 51 252 447 85 30.0 3e-16 MSFAPSVLTQVCEELEAEASAGGVTQLAYGIVSGGQLVAQRDPNAIFRIASMTKSFTAAT VLGVCRGVIPVSGTAPSLDDELMDWLPDLRESAWAAGMTVRDALTMSTGLPNDDPWADRL ESLSDAGMRDLMRRPAGTNFVTGTGYEYANYGYALLGAFVEAATGREFTEVVATHLLTPL GLESTGFDVRELDQDRLATGYRKNLAGELEPQPFTLPGAFSAIGGLASSVRDVARWINVL MTAVDGTAVAGESAGDAAGLATAAGEASGEGGSDLGEFPLGGNPREQRTWRRILADLQQA QRLLSVTRNARDAVVTAGYGYGLRCYFDTELGHCAGHSGGYPGFSLHMRWHAASGTGVVL LANVTGFPAEAVATNALDALVSDVRGRGDGSVAWPRAEALEETPARQGVGASGGGDAGAG VVYAVDPVCSFAPSREARERVAQAERMIAACDDSGADQVFSDNMDMDVPRAERLTHWAEV REYVGGEGSVAAGLGGVEVTWINAHGATWKVWGEERDGQQRGREVTMKLNAAGMIQKLKV TKL >gi|294972856|gb|ADNU01000001.1| GENE 24 21260 - 22717 1609 485 aa, chain - ## HITS:1 COG:SA0541 KEGG:ns NR:ns ## COG: SA0541 COG0531 # Protein_GI_number: 15926262 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Staphylococcus aureus N315 # 2 449 11 460 494 144 25.0 6e-34 MAELKKSLNMFQLLAFGVAGVVGTSWIYTNSKLFAEYGAGGVIFGLIAGVLLAACVALAY SELTTTFPRAGGEVVYSYTSMGRGAAFITGWMLLGAYVSSLAFYVTAFGFLLAKFVPWVN TIPLYTINDETVYLPVLLIGIALTAVFFLLNWFGIEVGAQVQMAMFAAIVVIGLALVVVG FTTGSPQNFFPAYAPDAQPVADTLRFIIPGMTFLAGFGLVAVLAEDANVSPRKVGRAVGF TVLAAGGFYCLVLAATAWVLPWQDVAEMDLGTVSAFREAGFAWLGAGAYLIAFLGLLTSF LGLFVASSRIMVAMGRAHLLPPRLGDIDERTGTPRKALIATAAVTLGLGWLGPGAVVWFL DTGGVYLGIVWFMVVLAKYLTPRRYPELERPYRTRWGFLPAIGGVGALLVIVWAIVPGTG SSLVWPSEYIILGVWCAIGAVLYAVAAKKQISRTEGLKALLGDSYAHLHRHEVEAQQRKS QQPKK Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:37:19 2011 Seq name: gi|294972853|gb|ADNU01000002.1| Brevibacterium mcbrellneri ATCC 49030 contig00002, whole genome shotgun sequence Length of sequence - 1439 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 65 - 547 296 ## DIP2085 putative insertion element 2 1 Op 2 . + CDS 613 - 1407 563 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|294972853|gb|ADNU01000002.1| GENE 1 65 - 547 296 160 aa, chain + ## HITS:1 COG:no KEGG:DIP2085 NR:ns ## KEGG: DIP2085 # Name: not_defined # Def: putative insertion element # Organism: C.diphtheriae # Pathway: not_defined # 1 160 1 160 160 191 68.0 1e-47 MRADSTLSESQREELVALFEQGFGSRAAANRVGVRYGPAQNLYQRFKLHGRLCLVRKRRK QEYPFEVKKEVVERYLAGETQLSLAREFGLWSDQQVKDWAVKWRKGGDEALKPRPIGRPR KSGKPKVLTEEETLRRENELLRAENAYLKKLRDLRDQGHA >gi|294972853|gb|ADNU01000002.1| GENE 2 613 - 1407 563 264 aa, chain + ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 258 22 278 283 236 43.0 4e-62 MARSTFFYHQKRLTSPDKHAVLKTAIRHSFESNKHRYGYRRVWRDLRNKGWVVNHKLVYK LMDQMGLKAKIRRRRPYISYAGTISRIAPNILDRNFTRDKPNTAWVSDITEFNITGRKVY LCPIMDLFDRTIIAHTVSTSAAATLALASLKKSITAQAPEPGWIIHTDQGFQFQHASWRA LIEKHEGKMSMSRKGNCYDNAVIENFFSHLKTEMYHGETFNNIKEFTNAINEYINWYNNK RLQERLKGLTPMQYRNQTLQALTA Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:37:23 2011 Seq name: gi|294972851|gb|ADNU01000003.1| Brevibacterium mcbrellneri ATCC 49030 contig00003, whole genome shotgun sequence Length of sequence - 1577 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 245 - 1456 564 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|294972851|gb|ADNU01000003.1| GENE 1 245 - 1456 564 403 aa, chain + ## HITS:1 COG:Cgl1010 KEGG:ns NR:ns ## COG: Cgl1010 COG3547 # Protein_GI_number: 19552260 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 8 403 4 400 402 366 48.0 1e-101 MSPEHSIDIFLGPDVGKSEHHACALDRDGNKVFDKPLPQLESELAGVFHQLQKLGTVLVI VDQPNTIGALPIAVARDCGCEVGYLPGLAMRKAADLYPGRAKTDKRDAFIIADTARTMPH TLRAVDRNDEVLSALKMLSGFDDDIARDCTRTVNRLRSILTQIYPSLERVFAGSTLTRTP ILDLLIHYKGPQGLKRAGYQRVLNWMIKHTRKDPTPLVDDIFAALKAQTVTVPGSDAAEL VIPQLAAHIKALKEQRNTIAEQVEEMLADFPLCEVLMSMPGVGIKTAAQILLAIGDGSDF DSAGHLAAYAGIAPVTRRSGSSIRGEFPARSGNKRLKNALCYSTFAVIRSHEPSRRYYER KRAEGKRHNAAVICLARRRCNVIYAMLKNKEFFREIPPRPVAA Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:37:30 2011 Seq name: gi|294972822|gb|ADNU01000004.1| Brevibacterium mcbrellneri ATCC 49030 contig00004, whole genome shotgun sequence Length of sequence - 26240 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 16, operones - 7 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 159 97 ## gi|295394300|ref|ZP_06804527.1| conserved hypothetical protein 2 2 Op 1 35/0.000 - CDS 262 - 1047 181 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 3 2 Op 2 . - CDS 1068 - 2150 725 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 4 3 Op 1 . + CDS 2153 - 4213 1090 ## COG1640 4-alpha-glucanotransferase 5 3 Op 2 . + CDS 4233 - 4961 541 ## PMI2598 hypothetical protein 6 4 Op 1 . - CDS 4973 - 5869 821 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 7 4 Op 2 . - CDS 5968 - 6369 511 ## Bacsa_0383 hypothetical protein 8 5 Tu 1 . - CDS 6483 - 10199 3320 ## Bcav_1065 metallophosphoesterase 9 6 Tu 1 . - CDS 10433 - 11071 380 ## COG1280 Putative threonine efflux protein - Prom 11158 - 11217 3.1 10 7 Tu 1 . + CDS 11213 - 11731 360 ## gi|295394310|ref|ZP_06804537.1| conserved hypothetical protein - Term 11748 - 11809 1.4 11 8 Op 1 . - CDS 11819 - 13012 946 ## COG0477 Permeases of the major facilitator superfamily 12 8 Op 2 . - CDS 13030 - 13593 421 ## Desal_1343 TetR family transcriptional regulator - Prom 13772 - 13831 2.4 13 9 Op 1 . - CDS 13941 - 14312 163 ## COG0346 Lactoylglutathione lyase and related lyases 14 9 Op 2 1/0.000 - CDS 14409 - 15221 648 ## COG0785 Cytochrome c biogenesis protein 15 9 Op 3 . - CDS 15218 - 16003 804 ## COG1651 Protein-disulfide isomerase - Term 16025 - 16066 11.1 16 10 Tu 1 . - CDS 16195 - 16791 356 ## COG1309 Transcriptional regulator - Prom 16828 - 16887 2.1 17 11 Tu 1 . + CDS 16851 - 17930 1550 ## PROTEIN SUPPORTED gi|227996086|ref|ZP_04043124.1| acetyltransferase, ribosomal protein N-acetylase + Term 17959 - 17994 1.5 - Term 17984 - 18024 -0.3 18 12 Tu 1 . - CDS 18108 - 18638 223 ## PROTEIN SUPPORTED gi|229851462|ref|ZP_04471505.1| acetyltransferase, ribosomal protein N-acetylase - Prom 18747 - 18806 3.0 19 13 Tu 1 . + CDS 18909 - 19133 216 ## COG2801 Transposase and inactivated derivatives 20 14 Tu 1 . + CDS 19537 - 19713 135 ## gi|295394320|ref|ZP_06804547.1| conserved hypothetical protein 21 15 Op 1 . - CDS 20035 - 21093 521 ## Selin_2303 hypothetical protein 22 15 Op 2 . - CDS 21083 - 22150 561 ## Selin_2304 hypothetical protein 23 15 Op 3 . - CDS 22134 - 23081 612 ## COG0338 Site-specific DNA methylase 24 15 Op 4 . - CDS 23078 - 24574 662 ## Kfla_0381 hypothetical protein 25 15 Op 5 . - CDS 24567 - 24800 270 ## gi|295394325|ref|ZP_06804552.1| excisionase family DNA binding domain protein 26 16 Op 1 . - CDS 25014 - 25874 596 ## COG2801 Transposase and inactivated derivatives 27 16 Op 2 . - CDS 25871 - 26188 283 ## jk0094 transposase for IS3504a Predicted protein(s) >gi|294972822|gb|ADNU01000004.1| GENE 1 3 - 159 97 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394300|ref|ZP_06804527.1| ## NR: gi|295394300|ref|ZP_06804527.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 52 1 52 53 70 100.0 3e-11 MLKKVVRSAVRTCAVGMIGVLALTGCSNGQSEDAGGAGNSEGNGDTGASEFV >gi|294972822|gb|ADNU01000004.1| GENE 2 262 - 1047 181 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 212 1 209 305 74 26 7e-13 MSTGVTLENVAVAYGKRTVLSDVSATFEPGHVHGIIGPNGAGKSTLLHAILGVRAYTGSV RVDGHEIAHMSARERAEHVAFVAQDTPPPDDFTGRELVSMGRYVRQDRFTLKSAHDVEVI DAALEQVGATDWADRPVRQTSGGERQLTSLARAIAQEAPTLVLDEPTSALDLNHEQRVLQ LLRPWASGHRTVIAVLHDITQAARYCDELVLLAPTSAGSQVVAQGPPEVVLTPAFLESAY GVKVDVRRSEVTGTLTVTPLD >gi|294972822|gb|ADNU01000004.1| GENE 3 1068 - 2150 725 360 aa, chain - ## HITS:1 COG:Cgl0656 KEGG:ns NR:ns ## COG: Cgl0656 COG0609 # Protein_GI_number: 19551906 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 20 360 2 335 339 209 48.0 6e-54 MYRIRILVGDMPKREVPQRTRPAVMRSTTLPTRFVWLGVLAVVLLVASFVAVAVGPVTLT LPEVVGALARLMPGGVEPQGPDLLVTEVRLPRVLTAALVGGSLSIAGAAMQAVFRNPLAE PGITGVSSGAATVAVLCIVCGVANPWVLPVGAFVGALVATFVVQAIGFRRGGSPATLLLV GMSMNAFLGAVISAVIANATNAEDARSALFWLNGDLTGRTMSDLGVAIIPLFVGAAGVLF FARELNMFALGETTAQSSGVEVRRVSQLVLAAAALTTAAGVAITGIIAFVGLVVPHLVRL MFRSDHTFLLPASFFLGGTFLVVADTCARMIFNPVVLQTGTVTALVGAPFLLFLVMRRAR >gi|294972822|gb|ADNU01000004.1| GENE 4 2153 - 4213 1090 686 aa, chain + ## HITS:1 COG:Cgl2245 KEGG:ns NR:ns ## COG: Cgl2245 COG1640 # Protein_GI_number: 19553495 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Corynebacterium glutamicum # 8 683 7 702 706 553 43.0 1e-157 MAVDPAVLREFASELGIRTEYYGSDGAFKSVPHETLQAVVASFGYPVESNQDVDAARTER TLAYWQRTLPPITVTRDDREDTIPVHVPHGTSVTVDMLFEDGGGQALTQVEDNTPPFDTG AEVVGQARFLLPAGLPLGWHTLVAHTEKGEAHAQAVVTPARLTTSDVVSRRRAVGVHAQL YSVRSERSWGMGDIADLRDVSAILGARFNADFVQINPLHATAPAPPVEASPYLPSSRRFF AALYVRVEDIPEFAQAPESVRQRVRELHQQFASVNRLNTLLDRNRVLTAKLEALELLFAV PRTPARKALFDAYRRAEGSGLSEFAQWCADEAGRCRPGDAVMADPEFHAWVQWIIDEQLM HAQSAATAAGMRIGIMHDLAVGVEENGADAWMHRTVLAEGVSVGAPADQYNEHGQDWSQS PWHPERMVQHCYRPWRDMLRTLMRHAGGLRVDHILGLFRLWWIPRGNTALNGAYVTYDHE AFVGILALEAQRSGTVVVGEDLGTFEPWIQDYLQERGILGTSVLWFERDGGTPRAPQRYR RACLATVNTHDLAPVRGYVDCSHVKVREQLGLLTRPVTQEFADEKRAIDAVVEAADVAGC FGPEGSSDTDDLVVGLHRYIAQTPAVLVAAGLADCVGERRMQNQPGTNTEYPNWKLPLAD SKGRVVLVDDLAGQPLLARIMDALSE >gi|294972822|gb|ADNU01000004.1| GENE 5 4233 - 4961 541 242 aa, chain + ## HITS:1 COG:no KEGG:PMI2598 NR:ns ## KEGG: PMI2598 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 3 225 6 228 245 108 29.0 1e-22 MTDSYSVNAEWYAALVMPWQDGMDSAVRTLLGPIDGGAVVDIASGVGTGLPLLHELGAER LYAVEPSEAMRIGLVTTVARDPKLMSVTTVVPHAFPQASELLPAEWSAGVMLNALGHLDD TDREELWATVAKRLVPGGRFVLSLQPPETVTEIPWADFGSVQIGDHVLQTRGKAEPLSDT HVEWTMEWTLMDQDRAVIDARTTTYPWRVLSHDQVVDEASRHGLVEVHGEAIPTFVALEK PV >gi|294972822|gb|ADNU01000004.1| GENE 6 4973 - 5869 821 298 aa, chain - ## HITS:1 COG:DRA0143 KEGG:ns NR:ns ## COG: DRA0143 COG1250 # Protein_GI_number: 15807812 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 5 283 55 335 347 228 43.0 8e-60 MTIFKTVTILGGGVLGSQIAMQAAYHGKDVTIFDPFQESLDKLPARWDWMRRGYSEDLRD FSEPKFDEALSRISTTTELAKAVSDVDIIIEAVPENLDLKRETWEKVGKLADARTVLATN TSSLLPSLFADSSGAPERFVAIHYANRIWSQNLAEVMGTPKTDPSTVDKAVTFAEETGMV PARVEKETPGYFLNSLLIPWLRAGSALYINGVGEPEAIDNAWKAGTHFGRGPFEVYDVVG FNVAANISRNSEDETEQRFAAKLQEAIDAGFSGIADGKGFYLYDKDGNITGPNDFFTK >gi|294972822|gb|ADNU01000004.1| GENE 7 5968 - 6369 511 133 aa, chain - ## HITS:1 COG:no KEGG:Bacsa_0383 NR:ns ## KEGG: Bacsa_0383 # Name: not_defined # Def: hypothetical protein # Organism: B.salanitronis # Pathway: not_defined # 1 126 1 128 130 90 41.0 2e-17 MKFLKAFAVWLGIIPLAILNGGFRENVLVDAIGDGARPVSGIILSILILGMAFIFIPKIR DCKPADYVIMGVGWFVLTNVFDAVPMFLEGATIGQFLATFDVRNGDFWILVVLTSLVAPI LTGQLRRKDRLSK >gi|294972822|gb|ADNU01000004.1| GENE 8 6483 - 10199 3320 1238 aa, chain - ## HITS:1 COG:no KEGG:Bcav_1065 NR:ns ## KEGG: Bcav_1065 # Name: not_defined # Def: metallophosphoesterase # Organism: B.cavernae # Pathway: not_defined # 63 1140 59 1135 1327 607 39.0 1e-171 MQPAPTEYPATVHKNPRQRASFRTRLFALLAVFALLTPGLTALDVWQATSAAAQITDEQL SKGGVLRTSETKPVAPGLDLTTFSRLEQPGWNEGSVLTADLGESTLSTDLRDTGTVTGRA PLDDVMHQGPRGKEAVAAVNGTFFDINHSDAPIYTSVSSDGLRAGNSKPQPSLTIAQGRA AVQELAATGTATLPGNKKHDLAGMNTPRLEADGIGVYTSAWGDYTLDRPVGAPDEKAAQI AAAVIKDGTVTETTGVVDSLGERRVADGTQVLIGREAGAETIAQLAKGDNVEIEVGPSKD VDLGIAGSHQILTNGEVPNMEDDLATSTHPRTAVGIGKDGTRLFVMVIDGRSNESRGMTL PEAGELLRNMGAHNALNLDGGGSSAMSARVAGDDGQKIWNTPSDGKVREVPNALVFYSSA KSDDTSGVQLNLGLDGEDAVFPGLTRTVKGAGLSSNLAPAEVDGTFSADAPLKVVSTKKN VARISGEERGAGKVTYSAGNMSDETQLRVLGKAIALRASEKSLSLPNADTRAKLTLSGLD GDGQQARIETADVKVTTTGGVEVDDDGLGTWTVRATGKTTTGKVTFTVGDLTTSVPVTFG TKDTALWDFSNPEDFETDSARASGEIAKAEGQDGKPAIGMKYDFSTSSATRGFYLGAKKT EPVEGTAIGFSLDVKSDGNGTWPRLQVTDANGTVTNIDGDHLEKEGWQIVKFAVPEGLAQ PLTVDRIRMMETRPDAQYTGDIAVSNLQVTTVPTAEGEKEPAIHDPALLTHGDVGDRPQK IAVMSDAQFIAAQPDSEAVAGARRTLREIREAKPDLLIIDGDFVDEGSKEDFALAKKIID EEWDTSIPHIYVPGNHEIMGSDIGVFEQEVGAATSSQDVDGTRVITLNTAGGSLRSGGID QIAKLEKQLDEVAGNEDLTGVTVFFHHPPNDPLPTKNSQLADEREARAFEKLMADFKRTS GKSAAVINAHVGVFHGSAVEGVTYLVNGNSGKSPAGTPETGGFTGWTMLGIDPANGKVGK NPSPQDRVDWLAAETRPWVDEISLETSRAVPQGESSEVTASFVQDGRTVPVAWPVTAQWG GEGVHVVDGSEQSEETTDENAVIRYNPVSGEITALRPGTAKLSVTVNGRTATQEVTVPTA DKEQPNEPEKPGDEDREEPEKPGDSEQPEEPGDQPGDHEESTSDSEGSESQTEATEANDE GSTLPRTGTEVSAVLLFALAGIGVGSIALAGTRRRGRH >gi|294972822|gb|ADNU01000004.1| GENE 9 10433 - 11071 380 212 aa, chain - ## HITS:1 COG:VC1421 KEGG:ns NR:ns ## COG: VC1421 COG1280 # Protein_GI_number: 15641432 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Vibrio cholerae # 9 209 8 207 212 84 28.0 2e-16 MLSNAALIGFCIAVTPLVVTPGASFTLVSSRGLVGDRRGAWAVIVGTAVGIITHGLLAGL GLAAVVMRSAEVYQVLRFAGAIYLVGLGVFLIWRGRRRGVATTSLERAHSSSKPVVHEVG QAYLANVLNVKAATVYLTLAPQFVPAQLMGVSSMLLLAAVHVCVMAVWLGLWSTGLSKIS EKFNLADWKRRIDTAGGAVLVFFGIRTALPGK >gi|294972822|gb|ADNU01000004.1| GENE 10 11213 - 11731 360 172 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394310|ref|ZP_06804537.1| ## NR: gi|295394310|ref|ZP_06804537.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 172 1 172 172 301 100.0 1e-80 MGELNSKTRLVQEIKASPHDNLSDALKVADHMSISLVREVLEEEIAPNDSALCHRFIEQW LERLEPLQKLAASIEVSHLYLLDLVDIPHAEDLILLRTLDNGADAVVAIRAEILSNRDLG RNPDASFGLTFVKTIETEVCDPLETAIERLRSNSERLSLLIRRACDEVKDQE >gi|294972822|gb|ADNU01000004.1| GENE 11 11819 - 13012 946 397 aa, chain - ## HITS:1 COG:SPCC18.02 KEGG:ns NR:ns ## COG: SPCC18.02 COG0477 # Protein_GI_number: 19075881 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Schizosaccharomyces pombe # 25 204 21 206 448 83 32.0 7e-16 MATHNHNPASRSGQTTPNRALIVGAAALFTDMLVHGLAVPVLPLLPAVVEQGPAATGFLF ASYAIAMITATFFAGRMVDRYGPKAPLLVGLVGLAAATLLFATGGPYWLLLVARFAQGIA GGTSWVAALSLIAATTPFEKRGQAMGIAMSTITLGVLIGPPLAGYMVEHLGTASPFVLAA GVALADGVLRIVLVKDSPRVSDDTAGPIAVLRVPGSLSIVLAIVVGAGVLSGVEPVLPVH LGAGVLTIGLLFGLASLAAIIANPLVGRYVSTALPQLLIGSGVLAAAASLLVLGWAGELW LTCIGMSLLGISSALLLAPATTLIGEQGFRSNPPTLGGSFALYNLAYAAGLAAGPLLTGF SVQQAGFTTAMIVTAIVLAVVGGVGLIRLPVQRQDSA >gi|294972822|gb|ADNU01000004.1| GENE 12 13030 - 13593 421 187 aa, chain - ## HITS:1 COG:no KEGG:Desal_1343 NR:ns ## KEGG: Desal_1343 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: D.salexigens # Pathway: not_defined # 2 100 3 107 205 69 38.0 6e-11 MRRTAEDAERTRLALLEAALMAFEEKGWRGATFEYVAERAGVTRGALHHHFRSKDALLED ALSWGWAEYGNRLFENESTEPAALLTEFLRLLCGDERFRALAACTVLVAPQALGDTTEKN ATLDTWRDHIAASIHNTDEAAPQTVANLALVFLQGLTVTAVTRPHDLPRPDELSASLMAL AKGVANL >gi|294972822|gb|ADNU01000004.1| GENE 13 13941 - 14312 163 123 aa, chain - ## HITS:1 COG:BS_yetH KEGG:ns NR:ns ## COG: BS_yetH COG0346 # Protein_GI_number: 16077783 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Bacillus subtilis # 1 113 1 114 120 74 31.0 4e-14 MIKRIASAVVYVSDQDEALKFYRDVLDFEVILDAPMGESSRWLEIKPRGGETSIVLAQAS AFGRRPGEGAFLTFACDDVAETVKQLRARGATTSEVNHEPWGIYATVDAPDGHKLQFNSR PQN >gi|294972822|gb|ADNU01000004.1| GENE 14 14409 - 15221 648 270 aa, chain - ## HITS:1 COG:Cgl0017 KEGG:ns NR:ns ## COG: Cgl0017 COG0785 # Protein_GI_number: 19551267 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Corynebacterium glutamicum # 1 253 1 262 290 103 32.0 4e-22 MSLGLLGAFAGGVLTLLSPCSAMLLPAFFSYAFTSPKELLGRTFIFYLGLVTTLVPLGIL AGSVGAFVTVHRDAVVAVAAVIISVMGVMTALNINLPFMPSGVQSVGRSTASVYLLGAVY GLAGVCAGPILGAVLTVSAASASALWGGLILVFFAAGMALPLVILSALWTRLPVVQKLVR PRPVSFGPVTTTRKNLVGGLLMIGLAALLFFTSGTAELSGFLGASTQARIEGWVLQKSSA GVELVILGVIAALAAVIAVVVMKRRGSRNK >gi|294972822|gb|ADNU01000004.1| GENE 15 15218 - 16003 804 261 aa, chain - ## HITS:1 COG:AGc1464 KEGG:ns NR:ns ## COG: AGc1464 COG1651 # Protein_GI_number: 15888143 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 85 255 61 226 226 78 31.0 1e-14 MADHSSPRQGRSRRAYAIIAIVAALAFIAVVGIAQLTSGNNNASGEDPAQSGATSGASSE DHANNGAQASGNEGEWVRRDTEDSAAIGDVNASVVITEWTDPRCPFCAHFHNDILPELKK KYVDTGKVRFEFITVAFFGEQSAVAGAAMEAAGKQGKYREFSDALYAAAPEKGHPDLPEE TLVKFAKTAGVEDIEQFRKDMNDSELIDAVGEATVTAQQYYGIQAVPFFAASDGESALRG AQPVENFSEFIDEQLSKAGAQ >gi|294972822|gb|ADNU01000004.1| GENE 16 16195 - 16791 356 198 aa, chain - ## HITS:1 COG:SMc01715 KEGG:ns NR:ns ## COG: SMc01715 COG1309 # Protein_GI_number: 15964204 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 21 165 36 186 231 58 31.0 8e-09 MSYWEHRKPVQRLRAVDIVEVARVAVRLLDSGGLKALTLRAVAEQVGVAPTSLYSRVESV DDLFDLALDTALADDPLMSEAICSADLLALMHTFFTHLTTHRWAGQVIGMRAPRGPAYLA LSERMCVLLEQAGASDPLGTAYRLSNLVIGASLTAPMASDEKREAIDPKQAPTYARLHAT HHISPQEILSEGITALLS >gi|294972822|gb|ADNU01000004.1| GENE 17 16851 - 17930 1550 359 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227996086|ref|ZP_04043124.1| acetyltransferase, ribosomal protein N-acetylase [Kytococcus sedentarius DSM 20547] # 1 359 1 359 359 601 82 1e-171 MLDATALPMVLGNTRLRTLSDLDAEAFATGTRHVTVRRFGHLPEPSYTPDSVRRMIREEV AAGLSSGTLAVLALADTETNRFAGSLVLFDVSSETAEVGFWIHSNARGEGHARRGLDLAS RFARSSGLRALTARTLPANKASQRCLIKAGFREVERSAGTTPAGQHEELIHYRRDLMPSA QWPLATERLRLRLHNASDADWLHELYSQPSVARYLLDEPWTKEVTREKLAERLEKNGLDG ETGALALVIEHDGVPIGDVALWLTDHEHRQGEIGWVLDPAHGGQGFASEAVRAVLDFGFD HFKLHRITAQMDARNSASAALARRVGLRLEAHHVQDWFSKGEWTDTLVYARLASEKMCQ >gi|294972822|gb|ADNU01000004.1| GENE 18 18108 - 18638 223 176 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229851462|ref|ZP_04471505.1| acetyltransferase, ribosomal protein N-acetylase [Streptosporangium roseum DSM 43021] # 7 157 11 157 163 90 39 1e-17 MIDEFDIKIRPLEVSDAQLMFEKLQDMRIYTFIDERPPESIEQLQERYRVLCEGAPQGLG VRWLNWIILNDRDDEPLGTLQATVDEEAHRASIAYVLLPNMWGKGIASRSTEWLLGCLHD DYGVTEAQVEIHEQNVKSLNLARRLGFVDAEVRREGDHNEVVLRRGLAADRKSSRA >gi|294972822|gb|ADNU01000004.1| GENE 19 18909 - 19133 216 74 aa, chain + ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 68 211 278 283 82 55.0 2e-16 MSRKGNCHDNAVIENFFSHLKTEMYHGETFNNINEFTNAINEYINWYNNKRLQERLKGQT PMQYRNQTLQTLTA >gi|294972822|gb|ADNU01000004.1| GENE 20 19537 - 19713 135 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394320|ref|ZP_06804547.1| ## NR: gi|295394320|ref|ZP_06804547.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 58 36 93 93 98 100.0 2e-19 MRATYDQGASLECVGGRFGYTSGTVRKHILIAGVVIRDTHGRETVQKAQQKHRQSRDT >gi|294972822|gb|ADNU01000004.1| GENE 21 20035 - 21093 521 352 aa, chain - ## HITS:1 COG:no KEGG:Selin_2303 NR:ns ## KEGG: Selin_2303 # Name: not_defined # Def: hypothetical protein # Organism: D.indicum # Pathway: not_defined # 6 311 8 287 325 105 27.0 3e-21 MRASAPLDSSTRAVLADWVELQVLLSEGPVAEQQLIRSQAAQSEPDHGDVLTEIDLEPAD EEILETSADELSQRVHEELAYRESVLGPLYPFELTVEYGKWALRRRETSDSSEQAAHRAY VCCLLISAMHSELLPIASKHTLFTRSAKIMQIESYLTAAEILGGSAYWFGYPRPDHSNML TAVQKLVEAMGLGVAPNERPPGLSPNANDGTVDIVAWRPFRDGQPAAVVAYGQVASGRNW NTKPIGAYVKGHFLSWFTEPPSDKHIELLFIPVLQHHKLRESSSEGYREVARAQARLREM DFGVVIDRLRLTELMAVSKVGGRYDEAEYMSHEAEAEAWVSEALAYASESCS >gi|294972822|gb|ADNU01000004.1| GENE 22 21083 - 22150 561 355 aa, chain - ## HITS:1 COG:no KEGG:Selin_2304 NR:ns ## KEGG: Selin_2304 # Name: not_defined # Def: hypothetical protein # Organism: D.indicum # Pathway: not_defined # 7 349 19 381 382 225 38.0 2e-57 MPRLASVAPGQLKLDLVNPRIPDVTFRTEDEALRYLYAQADLGELIQSIGNSGWLDFEPL IVEEVTNTVIEGNRRLAALRILANPELQQQLKVSLPDPLHARAIPDKVQVNFVESRKKAR DFIGFKHVNGAFKWDSYAKARFAYAWLKDGDNIDEVSRRLGDGHNTISRLVNGVVVLEQA EKAKLFNKEDRTKKSFYFSHLYTALSTSNVRSFLGLPENDNTVLPTGPVPQESRANLRDL LSWLYGQGDDPSIIRSQNPDLRRLVNVLGNQRATSVLSTTRDLNKAFDLVEDRARAFEKS FYRLLSASEEVSGMIGRYDPTSDLLDDAQTIRRAMDSIVQAMKKAHARDSDGDES >gi|294972822|gb|ADNU01000004.1| GENE 23 22134 - 23081 612 315 aa, chain - ## HITS:1 COG:sll0729 KEGG:ns NR:ns ## COG: sll0729 COG0338 # Protein_GI_number: 16332213 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Synechocystis # 10 278 14 282 285 99 30.0 7e-21 MSPTQTLPRAPKRVTVSPLRYPGGKGLLYSRLRQIIRDNNLTSSTYVEPYAGGAGAALGL LVSGQVANIAINDLDPAVYAFWRSVVDDPDEFSRRVRAVDLTVKEWEKQREIYDTASRDD LLRLGFATFYLNRTNRSGVLNGGPIGGKSQTGNYKIDARFNRDTLLERIRLIGLHASRIT VTNQDGREIIKQHADNPNAFIYADPPYFEKAGSLYMNAFDANDHEDLATCLNGVTVARWI LTYDNVPQVGQLYSERRSRLFSLNYSAHRVTIAQEVMVFSDSLTIPADIESEHQELVSTG VLDSADKEGDDATAS >gi|294972822|gb|ADNU01000004.1| GENE 24 23078 - 24574 662 498 aa, chain - ## HITS:1 COG:no KEGG:Kfla_0381 NR:ns ## KEGG: Kfla_0381 # Name: not_defined # Def: hypothetical protein # Organism: K.flavida # Pathway: not_defined # 15 497 13 489 491 159 27.0 2e-37 MIDMSAWEEMVVDVVNDLHLDPRNVRLDIPDGVPESDIVQDLFTNEKALKLVEGIAKVGL LTHEIPIVVERDGQLIVVEGNRRVAALKAIQNPYLAPEHQARISKFAQLVPSRDAVRRIT VKKAPSQDDADQLIAALHTGNQRVAWTPARQAAFFQAQLDAGKSPDHLIAQYPTVDVRKF ITRSRILELFRNVSYDDPTLGDYARKRRFPVSTLARLYANDMFLDLVGIQVKNGTGEVSL LSSAASFKRVATKIVSDIRDRKINTRSLNMTSSDRYVEYMDELRDLLNEKHLECDTYTDG QPRDVSTSQPNSRQGTGGDRPGEGAGSAVSGEDQSNEPSDTGRVKAKPFPKKRNYLNTDN LTVPPAFPASIHEIVKELSAINIQRFPNATLDLLRTFLEKTIKAYAEALGEDIRKGSNEK GFVFLSNCLVWLEDHFRTTGMTALIQPVQKVRGGRYGFVGSKEHLDSTNHNHHIFATPDD VRESWATIEGIMKAVLKP >gi|294972822|gb|ADNU01000004.1| GENE 25 24567 - 24800 270 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394325|ref|ZP_06804552.1| ## NR: gi|295394325|ref|ZP_06804552.1| excisionase family DNA binding domain protein [Brevibacterium mcbrellneri ATCC 49030] excisionase family DNA binding domain protein [Brevibacterium mcbrellneri ATCC 49030] # 1 77 1 77 77 140 100.0 3e-32 MAEEHEVLITDEAAAFLRVSTKTVFALACEGPLPGAKVERVLRFFQSDILALARGDSATK LTPEFGGIVAAGGCRDD >gi|294972822|gb|ADNU01000004.1| GENE 26 25014 - 25874 596 286 aa, chain - ## HITS:1 COG:MT0413 KEGG:ns NR:ns ## COG: MT0413 COG2801 # Protein_GI_number: 15839786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 11 284 2 278 294 215 45.0 6e-56 MIRFIDEYRNRFSVEFICKTLKNSRAGGFITSRGYRQSKARGLSARRLRDAVLVERISTV HKDNYGVYGVRKMWHALRRDGIDIGREQTARLMRLAGVSGKGKERVPRTTRKPNVPDLRP DLVGREFKAQGPNTLWVADITYVRTKTGFVYAAFVTDVYSRRIVGWALSDSMRTEVLPLQ ALNQAIVCAEETTGLVHHSDHGWQYVSVVYNERLSQHGIAASTGTVGDSYDNALAENVNG SYKNELIHTRRWNDVVDVEIATFEWVSWWNEARHPPKCGIPNPVRG >gi|294972822|gb|ADNU01000004.1| GENE 27 25871 - 26188 283 105 aa, chain - ## HITS:1 COG:no KEGG:jk0094 NR:ns ## KEGG: jk0094 # Name: tnp3504a1 # Def: transposase for IS3504a # Organism: C.jeikeium # Pathway: not_defined # 1 105 1 105 105 159 93.0 4e-38 MPRKFVQDAKDRVVRLVEDRILAENMSMQAACQAVAPKLGVSWHTARQWTQQARRAGKIS EPMPEDLVAENARLRRENQELRDTNELLKAASAFFASELDPQRRK Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:38:48 2011 Seq name: gi|294972821|gb|ADNU01000005.1| Brevibacterium mcbrellneri ATCC 49030 contig00005, whole genome shotgun sequence Length of sequence - 1036 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 8 - 1030 745 ## COG3464 Transposase and inactivated derivatives Predicted protein(s) >gi|294972821|gb|ADNU01000005.1| GENE 1 8 - 1030 745 340 aa, chain + ## HITS:1 COG:Cgl2316 KEGG:ns NR:ns ## COG: Cgl2316 COG3464 # Protein_GI_number: 19553566 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 10 330 105 427 436 270 44.0 3e-72 MTRAAAPRAKISRGGLEWALRGIVIDHLTVTRVAAGLGVSWSAANAAVLAEGKRRLIDDP ARFDGVTTIGVDEHVWRHTRLGDKYVTVIIDLTPARNKTGPARLLDMVEGRSKAVFKQWL AARPADWAKRIEVVAMDGFAGFKTAAAEELPDAVPVMDPFHVVRLAGDALDVCRRRVQQD TTGHRGLKGDPLYKARRTLHTGASLLTDRQRARLDAVFASEEHVEVEATWGIYQRIVAAY REPDKKKAKAMMQEVIAAISSGVPAALVEVRKLGRTMKQRAGDILAFFDRPGTSNGPTEA INGRLEHLRGSALGFRNLTHYIARSLLEAGGFRPALHPRS Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:40:02 2011 Seq name: gi|294972787|gb|ADNU01000006.1| Brevibacterium mcbrellneri ATCC 49030 contig00006, whole genome shotgun sequence Length of sequence - 28983 bp Number of predicted genes - 35, with homology - 34 Number of transcription units - 10, operones - 5 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 48/0.000 - CDS 3 - 320 479 ## PROTEIN SUPPORTED gi|197785439|ref|YP_002208196.1| 50S ribosomal protein L15 2 1 Op 2 50/0.000 - CDS 322 - 504 250 ## PROTEIN SUPPORTED gi|227428376|ref|ZP_03911433.1| LSU ribosomal protein L30P 3 1 Op 3 56/0.000 - CDS 504 - 1151 753 ## PROTEIN SUPPORTED gi|163840888|ref|YP_001625293.1| SSU ribosomal protein S5P 4 1 Op 4 46/0.000 - CDS 1148 - 1528 510 ## PROTEIN SUPPORTED gi|62424402|ref|ZP_00379548.1| COG0256: Ribosomal protein L18 5 1 Op 5 55/0.000 - CDS 1531 - 2067 748 ## PROTEIN SUPPORTED gi|62424403|ref|ZP_00379549.1| COG0097: Ribosomal protein L6P/L9E 6 1 Op 6 4/0.000 - CDS 2085 - 2483 591 ## PROTEIN SUPPORTED gi|62424404|ref|ZP_00379550.1| COG0096: Ribosomal protein S8 7 1 Op 7 48/0.000 - CDS 2550 - 3122 877 ## PROTEIN SUPPORTED gi|62424405|ref|ZP_00379551.1| COG0094: Ribosomal protein L5 8 1 Op 8 57/0.000 - CDS 3122 - 3487 408 ## PROTEIN SUPPORTED gi|163840893|ref|YP_001625298.1| 50S ribosomal protein L24 9 1 Op 9 50/0.000 - CDS 3490 - 3858 590 ## PROTEIN SUPPORTED gi|227494555|ref|ZP_03924871.1| 50S ribosomal protein L14 10 1 Op 10 50/0.000 - CDS 3997 - 4281 328 ## PROTEIN SUPPORTED gi|227497190|ref|ZP_03927438.1| ribosomal protein S17 11 1 Op 11 50/0.000 - CDS 4281 - 4532 371 ## PROTEIN SUPPORTED gi|62424409|ref|ZP_00379555.1| COG0255: Ribosomal protein L29 12 1 Op 12 50/0.000 - CDS 4535 - 4951 670 ## PROTEIN SUPPORTED gi|62424410|ref|ZP_00379556.1| COG0197: Ribosomal protein L16/L10E 13 1 Op 13 61/0.000 - CDS 4955 - 5749 1127 ## PROTEIN SUPPORTED gi|62424411|ref|ZP_00379557.1| COG0092: Ribosomal protein S3 14 1 Op 14 59/0.000 - CDS 5749 - 6123 475 ## PROTEIN SUPPORTED gi|62424412|ref|ZP_00379558.1| COG0091: Ribosomal protein L22 15 1 Op 15 60/0.000 - CDS 6160 - 6441 455 ## PROTEIN SUPPORTED gi|220913428|ref|YP_002488737.1| ribosomal protein S19 16 1 Op 16 61/0.000 - CDS 6457 - 7293 1357 ## PROTEIN SUPPORTED gi|62424414|ref|ZP_00379560.1| COG0090: Ribosomal protein L2 17 1 Op 17 61/0.000 - CDS 7324 - 7623 435 ## PROTEIN SUPPORTED gi|62424415|ref|ZP_00379561.1| COG0089: Ribosomal protein L23 18 1 Op 18 58/0.000 - CDS 7620 - 8291 820 ## PROTEIN SUPPORTED gi|62424416|ref|ZP_00379562.1| COG0088: Ribosomal protein L4 19 1 Op 19 40/0.000 - CDS 8298 - 8972 991 ## PROTEIN SUPPORTED gi|62424417|ref|ZP_00379563.1| COG0087: Ribosomal protein L3 20 1 Op 20 . - CDS 8987 - 9295 509 ## PROTEIN SUPPORTED gi|62424418|ref|ZP_00379564.1| COG0051: Ribosomal protein S10 - Prom 9536 - 9595 2.4 21 2 Tu 1 . + CDS 9090 - 9629 142 ## gi|305679896|ref|ZP_07402706.1| conserved domain protein - Term 9624 - 9671 16.4 22 3 Op 1 30/0.000 - CDS 9682 - 10875 1411 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 23 3 Op 2 51/0.000 - CDS 10973 - 13078 2304 ## COG0480 Translation elongation factors (GTPases) 24 3 Op 3 56/0.000 - CDS 13152 - 13622 708 ## PROTEIN SUPPORTED gi|62424421|ref|ZP_00379567.1| COG0049: Ribosomal protein S7 25 3 Op 4 . - CDS 13622 - 13996 572 ## PROTEIN SUPPORTED gi|84494793|ref|ZP_00993912.1| 30S ribosomal protein S12 + Prom 14114 - 14173 2.2 26 4 Op 1 . + CDS 14401 - 15177 754 ## CE0513 hypothetical protein 27 4 Op 2 . + CDS 15295 - 16320 1105 ## COG0205 6-phosphofructokinase + Term 16365 - 16414 18.5 - Term 16353 - 16402 16.4 28 5 Op 1 58/0.000 - CDS 16459 - 20334 4217 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 29 5 Op 2 . - CDS 20377 - 23859 853 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 23947 - 24006 2.4 + Prom 23947 - 24006 2.7 30 6 Tu 1 . + CDS 24239 - 24439 99 ## gi|295394359|ref|ZP_06804584.1| hypothetical protein HMPREF0183_0082 31 7 Tu 1 . - CDS 24463 - 24576 118 ## 32 8 Tu 1 . + CDS 24579 - 27599 2125 ## AAur_2951 putative integral membrane protein 33 9 Op 1 . - CDS 27627 - 27803 203 ## gi|295394360|ref|ZP_06804585.1| integral membrane protein 34 9 Op 2 . - CDS 27856 - 28038 113 ## DIP1963 transposase 35 10 Tu 1 . - CDS 28139 - 28981 823 ## COG2217 Cation transport ATPase Predicted protein(s) >gi|294972787|gb|ADNU01000006.1| GENE 1 3 - 320 479 106 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197785439|ref|YP_002208196.1| 50S ribosomal protein L15 [Streptomyces sviceus ATCC 29083] # 1 106 1 106 151 189 85 2e-47 MADNKALKLHDLRPAPGAKTAKTRVGRGEASKGKTAGRGTKGTKARYQVPERFEGGQTPL HMRLPKLRGFKNPNKVEYQVVNLDKLSQLFPEGGTVTVDDLVAKGA >gi|294972787|gb|ADNU01000006.1| GENE 2 322 - 504 250 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227428376|ref|ZP_03911433.1| LSU ribosomal protein L30P [Xylanimonas cellulosilytica DSM 15894] # 1 60 1 60 60 100 80 8e-21 MAKLKITQVKSKIGGKENQRQTLRSLGLRKLHDTVVKEDRPEIRGMVNTVSHLVTVEEVD >gi|294972787|gb|ADNU01000006.1| GENE 3 504 - 1151 753 215 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163840888|ref|YP_001625293.1| SSU ribosomal protein S5P [Renibacterium salmoninarum ATCC 33209] # 1 215 17 238 238 294 69 4e-79 MSEENKNQQAQAEQNNNKSDERGRGRGRGEGGGRRGNRGDRDDKNQFIEHVVTINRVSKV VKGGRRFSFTALVVVGDGDGMVGVGYGKAKEVPAAIAKGVEEAKKNFFRVPRIQKTIPHP VQGEDAAGVVLLRPAAPGTGVIAGGPVRAVLDCVGIHDILSKSLGSANAINIVHATIAAL KQLERPEEVAARRGLPVDEVAPHALLVAAQKGAAS >gi|294972787|gb|ADNU01000006.1| GENE 4 1148 - 1528 510 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424402|ref|ZP_00379548.1| COG0256: Ribosomal protein L18 [Brevibacterium linens BL2] # 1 126 1 126 126 201 80 6e-51 MAFGKKQSYGKGKAAARARRHNRLRKSVSGTAARPRLSVTRSSRHMFVQVIDDVEGKTLA SASTMEADVRAMSEDKTAKARKVGELVAERSKAAGIEAVVFDRGGNAYHGRVAAVAEGAR EGGLNL >gi|294972787|gb|ADNU01000006.1| GENE 5 1531 - 2067 748 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424403|ref|ZP_00379549.1| COG0097: Ribosomal protein L6P/L9E [Brevibacterium linens BL2] # 1 178 1 178 178 292 80 1e-78 MSRIGKKPISVPSGVEVKIDGQNVSVKGPKGELALTVAEPITVSLDDAEITVSRPDDERE NRSLHGLTRSLIHNNIVGVTEGYSKNLEIVGTGYRVQAKGKNLEFNLGYSHSITVEPPAG IEFKVDGQTKLSVNGIDKQLVGEVAANIRKLRKPEPYKGKGIRYAGEVVRRKVGKAGK >gi|294972787|gb|ADNU01000006.1| GENE 6 2085 - 2483 591 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424404|ref|ZP_00379550.1| COG0096: Ribosomal protein S8 [Brevibacterium linens BL2] # 3 132 1 130 130 232 89 2e-60 MTMTDPIADMLTRLRNANSAYHEDVSMPYSKLKSNIAEILKAEGYIADYRVEDAEVGKNL QLDLKFGPNRERSIAGIKRVSKPGLRVYAKSTALPKVLGGLGIAILSTSSGLLTDRQAAK KGVGGEVLAYVW >gi|294972787|gb|ADNU01000006.1| GENE 7 2550 - 3122 877 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424405|ref|ZP_00379551.1| COG0094: Ribosomal protein L5 [Brevibacterium linens BL2] # 1 189 1 188 189 342 89 2e-93 MTEATVSSRPLPRLKQVYRDEIVQKLQDEFSYANPMQVPTLTKVVVNMGVGDAARDSKLI EGAIRDLTMITGQKPVVTRAKKSIAQFKLREGQPIGAHVTMRGARMWEFLDRVVSLALPR IRDFRGLSDRQFDGNGNYTFGLTEQSMFHEIDQDSIDRVRGMDITVVTTAKNDEEGRALL KHLGFPFKTN >gi|294972787|gb|ADNU01000006.1| GENE 8 3122 - 3487 408 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163840893|ref|YP_001625298.1| 50S ribosomal protein L24 [Renibacterium salmoninarum ATCC 33209] # 1 121 1 121 122 161 65 4e-39 MPKMYIKKGDLVQVISGARQSRGGDRGKQGKVLKVFPEQNRVLVEGVNRVTKHKKPAQTA TGATAGGIEIHEAPIHASNVMLVDPKDNKPTRVGFREEKVERDGRTKTVRIRYSRRTGED I >gi|294972787|gb|ADNU01000006.1| GENE 9 3490 - 3858 590 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227494555|ref|ZP_03924871.1| 50S ribosomal protein L14 [Actinomyces coleocanis DSM 15436] # 1 122 1 122 122 231 95 3e-60 MIQQESRLKVADNTGAKEILAIRILGGSGRRYAGIGDTIVATVKDAIPGGNVKKGDVVKA VVVRTRKERRRPDGSYISFDENAAVILKNDGEPRGTRIFGPVGRELRDKKFMKIVSLAPE VL >gi|294972787|gb|ADNU01000006.1| GENE 10 3997 - 4281 328 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227497190|ref|ZP_03927438.1| ribosomal protein S17 [Actinomyces urogenitalis DSM 15434] # 1 94 1 92 92 130 73 7e-30 MAEQNETPEVVERNTRRTMRGYVVSDKMDKTIVVEVEDRKKHRLYGKVMRTTSKYKVHDE INTAGVGDLVRIVETRPLSATKRFRLLEIIERAK >gi|294972787|gb|ADNU01000006.1| GENE 11 4281 - 4532 371 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424409|ref|ZP_00379555.1| COG0255: Ribosomal protein L29 [Brevibacterium linens BL2] # 1 83 1 83 83 147 89 8e-35 MAVGSKDLSMDVLDGYDNDRLVEELKKAKAELFNLRFQSATGQLESHGRLKAVRRDIARI YTVLRERELQIRTNPADAKEEGK >gi|294972787|gb|ADNU01000006.1| GENE 12 4535 - 4951 670 138 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424410|ref|ZP_00379556.1| COG0197: Ribosomal protein L16/L10E [Brevibacterium linens BL2] # 1 138 1 138 138 262 89 2e-69 MLIPRRVKYRKQHHPKRSGLAKGGTEIAFGDWGIQALEPAYVTNRQIEAARIAMTRHIKR GGKVWINIYPDRPLTKKPAETRMGSGKGSPEWWVANVKPGRVLFELAGVSEEVAREALRL ATHKLPLKARIISREGGE >gi|294972787|gb|ADNU01000006.1| GENE 13 4955 - 5749 1127 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424411|ref|ZP_00379557.1| COG0092: Ribosomal protein S3 [Brevibacterium linens BL2] # 1 264 1 273 273 438 82 1e-122 MGQKINPNGFRLGITTDHKSKWFTDSNKRGQRYADFVGEDVRIREMLQNNLERAGLSRVN IERTRDRVRVDIHTARPGIVIGRRGAEADRLRGQLEKLTGKQIQLNILEVKNPEIDAQLV AQGVAEQLASRVAFRRAMRKAIQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH TLRANIDYGFYEAHTTFGRIGVKVWIYKGDLTDKELAAQEAAQPSGRGPRGGGRGRGRGG RGRGGRQQQNDNKTEAKASAGSEG >gi|294972787|gb|ADNU01000006.1| GENE 14 5749 - 6123 475 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424412|ref|ZP_00379558.1| COG0091: Ribosomal protein L22 [Brevibacterium linens BL2] # 1 123 1 127 128 187 75 7e-47 MEAKAKARYLRVTPQKARRVVDLVRGQQATEALAVLKFAEQSASEPVYKLIASGVANARV LADKNGEAFNEDDLYISEIYVDEGPTMKRFRPRAQGRAFRINKRTSHITVVLSDEQGASR KENA >gi|294972787|gb|ADNU01000006.1| GENE 15 6160 - 6441 455 93 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|220913428|ref|YP_002488737.1| ribosomal protein S19 [Arthrobacter chlorophenolicus A6] # 1 93 1 93 93 179 88 1e-44 MPRSLKKGPFVDEHLYKKVAAQNEKGTKNVIKTWSRRSMIVPDFLGHTIAVHDGRKHVPV FITESMVGHKLGEFAPTRTFRGHDKDDRKGRRR >gi|294972787|gb|ADNU01000006.1| GENE 16 6457 - 7293 1357 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424414|ref|ZP_00379560.1| COG0090: Ribosomal protein L2 [Brevibacterium linens BL2] # 1 278 1 278 278 527 90 1e-149 MGIRKYKPTTPGRRGSSVADFVEVTRSTPEKSLLRPLPKKGGRNSQGRITTRHHGGGHKR QYRVIDFRRHDKDGVVAKVAHIEYDPNRTARIALLHYVDGEKRYIIAPNKLKQGDRVEAG IDADIKPGNNLPLRNIPVGTVIHAVELRPGGGAKIGRSAGTSVQLVARFGRYAQLRMPSG EIRNVDARCRATVGEVGNAEQANISWGKAGRMRWKGVRPTVRGVVMNPIDHPHGGGEGRT SGGRHPVSPWGQKEGRTRRPKKESDKYIVRRRRTGKKR >gi|294972787|gb|ADNU01000006.1| GENE 17 7324 - 7623 435 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424415|ref|ZP_00379561.1| COG0089: Ribosomal protein L23 [Brevibacterium linens BL2] # 1 99 1 99 99 172 84 3e-42 MSVKFKDPRDVIIAPVVSEKTYGLMDEGKYTFLVDPRSNKTEIKYAIESIFDVKVASVNT LNRQGKRKRTRAGWGKRKDTKRAIVALKDGSIDIFGGSL >gi|294972787|gb|ADNU01000006.1| GENE 18 7620 - 8291 820 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424416|ref|ZP_00379562.1| COG0088: Ribosomal protein L4 [Brevibacterium linens BL2] # 1 207 1 207 217 320 78 7e-87 MSENLTVDILDAKGKKAGSAELPASIFDQKTNVPLIHQVVVAQLAASRQGTHKAKTRSEV RGGGRKPYRQKGTGNARQGSIRAPQYAGGGIVHGPVPRDYSQRTPKKMKAAALRGALSDR ARLGQVFVVKNLIDSDVPSTKAARQALEALSDRAHKLIVTERDDSITALSVRNLPTVHVL SFDQLNTYDVLMADDIVFTEAALNSFLEFARGAKAGEAQEVAK >gi|294972787|gb|ADNU01000006.1| GENE 19 8298 - 8972 991 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424417|ref|ZP_00379563.1| COG0087: Ribosomal protein L3 [Brevibacterium linens BL2] # 1 222 1 222 224 386 84 1e-106 MANTRSKALPTTLNVKGLMGTKLGMTQVWDENNNLVPVTVISASSNVVTQIRNEEVDGYS AVQIGYGEIDPRKVNKPAKGHFEKAGVAPRRHLVELRTADAGEYELGQELSTEVFEAGIK VDVTANTKGKGFAGVMKRHGFAGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMG NVRHTTQNLTIHSIDSENNLLLIKGAVPGPKGAVVLVRSAAKGA >gi|294972787|gb|ADNU01000006.1| GENE 20 8987 - 9295 509 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424418|ref|ZP_00379564.1| COG0051: Ribosomal protein S10 [Brevibacterium linens BL2] # 1 102 1 102 102 200 96 8e-51 MAGQKIRIRLKSYDHAVIDNAARKIVDTVTRAGATVVGPVPLPTEKNVYCVIRSPHKYKD SREHFEMRTHKRLIDIVDPTPKAIDSLMHIDLADDVNIEIKL >gi|294972787|gb|ADNU01000006.1| GENE 21 9090 - 9629 142 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|305679896|ref|ZP_07402706.1| ## NR: gi|305679896|ref|ZP_07402706.1| conserved domain protein [Corynebacterium matruchotii ATCC 14266] conserved domain protein [Corynebacterium matruchotii ATCC 14266] # 1 54 44 97 97 75 75.0 2e-12 MRISKCSRLSLYLCGDRITQYTFFSVGNGTGPTTVAPARVTVSTILRAALSMTAWSYDLS RMRIFCPAMASFLHLSVFLAINHGPNGSRGLRQLSVTDPRGRACRLVLADKISRFHSFCC RLIEPKDSSRSLGPFASQRSAGVMAQNCNLSILSYVAKGMQIQMRLVAKRFRHQYFAPT >gi|294972787|gb|ADNU01000006.1| GENE 22 9682 - 10875 1411 397 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 395 1 405 407 548 67 1e-155 MAKASFDRTKPHVNIGTIGHVDHGKTTLTAAITKVLADKYPDLNEARAFDQVDNAPEEKE RGITINVSHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTRE HVLLARQVGVPYIVVALNKSDMVDDEELLELVEMEVRELLSSQEFDGDDAPVVRVSALKA LEGDPEWVKSVEDLMDAVDENVPEPERDIDKPFLMPVEDVFTITGRGTVVTGRVERGVLL PNEEIEIVGIKPQSSKTTVTAIEMFRKTLPDARAGENVGLLLRGTKRDEVERGQVIVKPG SITPHTNFEGQVYILSKDEGGRHNPFYSNYRPQFYFRTTDVTGVITLPEGTEMVMPGDNT DMSVELIQPIAMEEGLRFAIREGGRTVGAGRVTKITK >gi|294972787|gb|ADNU01000006.1| GENE 23 10973 - 13078 2304 701 aa, chain - ## HITS:1 COG:ML1878 KEGG:ns NR:ns ## COG: ML1878 COG0480 # Protein_GI_number: 15828005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Mycobacterium leprae # 4 699 5 700 701 1021 73.0 0 MALEVLSDLKKVRNIGIMAHIDAGKTTTTERILFYTGVNYKLGETHDGASTMDWMEQEQE RGITITSAATTCYWEDNQINIIDTPGHVDFTVEVERSLRVLDGAVAVFDGKEGVEPQSET VWRQADKYNVPRVCFVNKMDKLGADFYHTVETIKDRLGAKPLVIQLPIGAESDFEGVVDL ITMKAYVWPDEEKKGQDMTEIEIPEDLKDRAEEYRASLVEDVAEASDELMEKYLEEGELP IEDIKAGIRKLTINSEAFPVMCGSAFKNKGVQPMLNSVIDYLPSPLDVPPVQGHPVNDEE TVVTREPKKDGPFAALAFKVATHPFFGSLTYVRVYSGTVKPGDQVLNTTTGKKERVGKLF QMHSNKENPVDEAFAGHIYAFIGLKDTTTGDTLCDASDPVVLESMSFPEPVIFVSIEPKT KGDQEKLSTAIQKLVKEDPTFTVNLNEETGQTEIGGMGELHLDVFVDRMKREFKVEANIG KPQVAYRETIRRTVEKQDYTHKKQTGGSGQFAKVQVTIEPMEVDGDTIYEFEDAITGGRV PREYIPSVDAGIQDAMQMGVLAGYPLVGIKATLVDGAYHDVDSSEMAFKIAGSMVLKEAV KKANPVLLEPLMDVEVRTPEEYMGDVIGDLNSRRGQIQSMEDATGIKVVKALVPLSEMFG YIGDLRSKTQGRAVYSMQFQSYSEVPKAVADEIIQKTRGGE >gi|294972787|gb|ADNU01000006.1| GENE 24 13152 - 13622 708 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424421|ref|ZP_00379567.1| COG0049: Ribosomal protein S7 [Brevibacterium linens BL2] # 1 156 1 156 156 277 88 6e-74 MPRKGPAPKRPVVIDPVHNSPLVTQLINKVLLDGKRSTAERIVYGALEGASAKANMEPVQ LLKKALDNIRPALEVRSRRVGGATYQVPVDVRPARSTTLALRWLVGFSRQRREKTMTERL MNEILDASNGLGAAVKRREDTHKMAESNKAFAHYRW >gi|294972787|gb|ADNU01000006.1| GENE 25 13622 - 13996 572 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|84494793|ref|ZP_00993912.1| 30S ribosomal protein S12 [Janibacter sp. HTCC2649] # 1 124 1 124 124 224 89 4e-58 MPTIQQLVRKGRHDKAAKNATPALLGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLSSQ IEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYKIVRGSLDTQGVKGRQQARSRYGAK REKK >gi|294972787|gb|ADNU01000006.1| GENE 26 14401 - 15177 754 258 aa, chain + ## HITS:1 COG:no KEGG:CE0513 NR:ns ## KEGG: CE0513 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 35 251 43 264 266 74 28.0 4e-12 MPNSSAHPGEGKDLARSQPDPSNNEHNSIEKSEPQPQRRTRASDTDRDTVVSALSDALSR GQLTALEFDERHSQALKAMYIDQLPELIEDIPEADELEQELRSRDTARRESSELATKPGS HLGPYNNQCPGPIQPAKPGNGKSDTAICILSGSNQVVAPNTPKVNALTMLGGNDYDLCDV MGPGVEFTIESVNFLGGHDIYVPPGVRIIDKSISILGGVDIAQNARGDGSNGTLIISGFN LLGGDDVMLARGYRQTQQ >gi|294972787|gb|ADNU01000006.1| GENE 27 15295 - 16320 1105 341 aa, chain + ## HITS:1 COG:Cgl1221 KEGG:ns NR:ns ## COG: Cgl1221 COG0205 # Protein_GI_number: 19552471 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Corynebacterium glutamicum # 1 341 4 346 346 296 49.0 5e-80 MNIGILTSGGDCPGLNAVIRGAVRKGVRETGDTFVGLKDGWRGLLEADYAPLTTHDVRGI SGRGGTILGTSRTHPYSQGGPDQMKRVMKEHNIDAIIAIGGEGTLAGAARLADDEGMPVV GVPKTIDNDLNNTDYTFGFDTAASIATESLDALRTTAESHHRCMVVEVMGRNVGWIALHA GMAGGAQAVLLPEFPVPYEQIYTWVRSARDRGRAPIVVVAEGFVSEDLDDQVSDAGRDKH GRVRLGGVANHLAPLIEEATGVETRATILGHLQRGGSPTAYDRVLATRLGMAAVELVHHK KWGYMTSLSGVDITSVQMALAVDNLKKVPQSRWDELQVLLG >gi|294972787|gb|ADNU01000006.1| GENE 28 16459 - 20334 4217 1291 aa, chain - ## HITS:1 COG:Rv0668 KEGG:ns NR:ns ## COG: Rv0668 COG0086 # Protein_GI_number: 15607808 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Mycobacterium tuberculosis H37Rv # 1 1289 1 1315 1316 1705 65.0 0 MPDVNFFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL APKDLEKVIYFAAYMITSVDEDSRHRDLPTLQNQIDVEKKQISDRLAADLDRRAKKLEED LKVLEDEGKTAATKKKVETQANKEMANLRRHADRELDRIEKVWDRFKNLKVSDLEGDEAL YRDMVARFGIYFTGAMGAEAIQQRLRDFDLEGEAEALRELIKTGKGQRKTRALKRLKVVN AFMTTDNSPEGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK RVDYSGRSVIVVGPTLKLHECGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQH PQVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPLLVEGKAIQIHPLVCSAFNADFDGDQ MAVHLPLSAEAQAEARILMLSANNILKPSDGKPVTMPSQDMIIGIYHLTSQVDGAVGEGR EFSSVAEAIMAFDRGELDLRAKARIRIDNLVPAKDMELPEDWTEGQSLTIETTLGRAVFN ETLPENYRYVNNTVNKKLLSKIVNRLADYYPKVEVAATLDNFKATGFHWATRSGLTVAMS DIVSPEAKEGLLNDAEDQSTKVEDQYAIGALTDDERRSELVKIWSDTTDKVAEVMQDNFD SENSVYRLVESGASGNWTQVRQLAGMRGLVTNPKGEIIPRPIKSNYREGLSVLEYFIASH GARKGLADTALRTADSGYLTRRLVDVSQDVIVRTETTDSKKGITLPVSQEAADGTLEPHE FVETSVLGRLTVADVVDANGNVIVPAKTDISTDVIDLLVEAGIREVKVHSVLTADSDVQI SAQHYGRSMATGQLVDIGEAIGTVAAQSIGEPGTQLTMRTFHTGGVAAGGGGDITQGLPR VTELFEARTPKGFAPIAEATGRVKIDDSRKTRYVIVVPDDGSDEIEHAVGRRAQLLVEEG QHVKAGEKLQMGAVDPKQVLRIRGRREAERFLVDEVQKVYRSQGVGIHDKHIEVIVRQML RRVTVIESGDTNLLPGELVDRSRYQEENKRVVAEGGQPASARDELMGITKASLATESWLS AASFQETTRVLTEAALEGKSDPLLGLKENVILGKLIPAGTGMHKFRDMIVEPTEEAKQEM FANSYGDFYPALGGDASTIPLEDYDFDSFGG >gi|294972787|gb|ADNU01000006.1| GENE 29 20377 - 23859 853 1160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 837 1122 1080 1387 1392 333 56 1e-90 MAVANENTRTANPPKRVSFAKIHEPLEVPNLLGLQIDSFDWLIGNERWQDRVAEAIENGD DSVATTSGLEDIFEEISPVEDFSGAMSLSFSEHRFEPPKYSIDECKERDMTYSAPLFVIA EFMNNNTGEIKSQTVFMGDFPLMTDKGTFIINGTERVVVSQLVRSPGAYFESVPDKTSDR DIYTAKIIPSRGAWLEFEVDKRDQVGVRLDRKRKQSVTVLLKALGWTESQILEEFGEFDS IKDTLAKDTVSTREEALLDIYKKLRPAEPATVDAAETLLRNLYFNPKRYDLAKVGRYKIN RKLGVDEALTESVLTVDDIVATIRYIVSLHAGKETMPGVRDGQKADIRVALDDIDHFGNR RIRAVGELIENQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQL SQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMDVRDVHPSHYGRMCPIETPEGPNIGL IGSLASYARINPFGFIETPYRKVENGVVTDKTQYLTADDELEFNIAQANAPLTEDQKFEE EFVLARPMGGGGEADLIPADEIDFMDVSARQMVSVATALIPFLEHDDANRALMGANMQRQ AVPLVRAQAPYVGTGMEYRAAVDAGDVITAEKAGVVTEVSADYVTVMNDDGTTTTYKAEK FRRSNHGTSYNQRIIVDQGDRVEVGAVLADGPSTENGEMALGKNLLVAFMSWEGYNFEDA IILSQRMVQDDVLSSIHIEEHEIDARDTKLGAEEITRDIPNISPDALAELDERGIIRIGA EVTDGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGETGTVIGVKVFD REEDDELSPGVNQLVRVYVAQRRKITIGDKMAGRHGNKGVISQILPIEDMPFMEDGTPVD VILNPHGVPRRMNIGQVFEIHLGWIANQGWHIEGNPEWAKELADGKFEFDAEPGTNVATP VFDGAHEHELRGLLDSTRPNRDGDRLIDSTGKARLFDGRSGEPFPFPISVGYMYMLKLHH LVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLTIKSDD IPGRVKVYEAIVKGDNLPDPGIPESFKVLIKEMQSLCLDVEVLSSDGQSVEMRDDDEVYR AAEELGINLSRNEANTVEEV >gi|294972787|gb|ADNU01000006.1| GENE 30 24239 - 24439 99 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394359|ref|ZP_06804584.1| ## NR: gi|295394359|ref|ZP_06804584.1| hypothetical protein HMPREF0183_0082 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0082 [Brevibacterium mcbrellneri ATCC 49030] # 1 66 1 66 66 108 100.0 1e-22 MDQRPYRACGGRSFERHDSVSQNTHGQPETTSAGAFHSTTHNPRRIRTATPATPTELRAL RLPWFF >gi|294972787|gb|ADNU01000006.1| GENE 31 24463 - 24576 118 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLKAAVSELSGGGAVAADRAGLLVLADRDDQVDPAD >gi|294972787|gb|ADNU01000006.1| GENE 32 24579 - 27599 2125 1006 aa, chain + ## HITS:1 COG:no KEGG:AAur_2951 NR:ns ## KEGG: AAur_2951 # Name: not_defined # Def: putative integral membrane protein # Organism: A.aurescens # Pathway: not_defined # 3 198 182 379 1415 89 33.0 1e-15 MPNILLGVACLFLIAAAITFASVTGSPIVRAVAIGVVAALSYVAGLVIHALSARLKPVGF ALVALGIALLPIAAGLLGASDSIPGSVAWFAASLVGVIAYVLAAILLKSETIMWFGLLFV GSLVLSIVNFAALPPVAFFYGLMATATVFALIGALGRNRLPKRFVRPHMLLGEILAPASA VACLFVQPFPATYQWAILFGLLTLFYVLSASLNRWGWQAIVARVTGAFTIALTANAVTKL ISDTDDAIMFATGLAFLIVGLWHVVEALIRRANTSFRLTAHIVTTACFLVGTAVTGFRIE AVDGRLYIPAGIIFAALAAMHILFAVATDTPLQRALGYGSAVMFAVSLACVVAHFIGDDK SAVVICYVMAVGLFVVADALFTGWIVSPRGRSRRRLRVASPFYTAVFPASAFAPAFLALF YGMQVWHLIVLFVLVLVVVGLAFLVRSGLFTLSAVPLLFTFSFGVDAVIHSGRDSWNWIF SRPLSLAFFALLAAGLMVAYARLYARGRYRRAQYSAIASLIVTGLGAVNALMITFAPNFP YAVLFVTATVVDLVALLVSFEVARRLTRAEHQRRVVVARTKHAERAQHGPVASFRPSPAP VFVILCAVAVCVHAVGAVAPKFEDWYFFTIASVLATAVIVYVTHVLRVQWFILATMVTVP AFALSVTSTFLEGTNHMVLANIIAWAILYAVHWVQVLVKRKALASLVAATLILLGALLPA AFIDSSAVPIPSFARVVVGLILLAVAATVMTAVRVSRHRAVFFEIASYVGALGLAVSFSG LVRWNFYVPLHIVALTALFWAWVYGSRGGFPWLASRRVGTQVRLYVTFGLMTFIGLLVAL ISGGFYTAVFLSWLVFFLIMGALTNRPVLVWCSVGTLALSAVWLFRDVVWLVLVVLALII IGVVVWMLLRGNRKPEGDAHSEQPVQPFGDTQDRQHAQAPQPPRRQVPQPPQVPQPPQVQ RQQPPHQPQAREPFNPPPQPPQQQGYHRRPAPEGGNSSDRFRPPNS >gi|294972787|gb|ADNU01000006.1| GENE 33 27627 - 27803 203 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394360|ref|ZP_06804585.1| ## NR: gi|295394360|ref|ZP_06804585.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030] integral membrane protein [Brevibacterium mcbrellneri ATCC 49030] # 1 58 1 58 58 84 100.0 4e-15 MNKRPKTYIASILAVLGAVFIVLALWLTEFAWVLWVLAGLSFVAAIVVASRKSSDRTD >gi|294972787|gb|ADNU01000006.1| GENE 34 27856 - 28038 113 60 aa, chain - ## HITS:1 COG:no KEGG:DIP1963 NR:ns ## KEGG: DIP1963 # Name: not_defined # Def: transposase # Organism: C.diphtheriae # Pathway: not_defined # 1 56 25 80 483 71 62.0 1e-11 MSRSYTKEQRREAFRVFKRTKSVTKTIRELGYPGQRTMHRWVREGVKPRRLRKQAKASAC >gi|294972787|gb|ADNU01000006.1| GENE 35 28139 - 28981 823 280 aa, chain - ## HITS:1 COG:Cgl2900 KEGG:ns NR:ns ## COG: Cgl2900 COG2217 # Protein_GI_number: 19554150 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 1 276 461 736 739 421 84.0 1e-117 IRATGFSAASGRGVRATVDGAEILVGGPNMLREFNLTTPAELTDTTSAWTGRGAGVLHIV RDGQIIGAVAVEDKIRPESRAAVKALQDRGVKVAMITGDAQQVAQAVGQDLGIDEVFAEV LPQDKDTKVTQLQERGLSVAMVGDGVNDAPALTRAEVGIAIGAGTDVAMESAGVVLASDD PRAVLSMIELSQASYRKMIQNLIWASGYNILAVPLAAGVLASIGLVLSPAMGAILMSAST IVVALNAQLLRRIDLDPAHLAPAESEEGHTTPTPASTAVH Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:41:16 2011 Seq name: gi|294972715|gb|ADNU01000007.1| Brevibacterium mcbrellneri ATCC 49030 contig00007, whole genome shotgun sequence Length of sequence - 86923 bp Number of predicted genes - 75, with homology - 71 Number of transcription units - 37, operones - 20 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 16/0.000 + CDS 2 - 943 861 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 2 1 Op 2 . + CDS 943 - 2013 712 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 3 1 Op 3 . + CDS 2010 - 3104 912 ## MAP0370 hypothetical protein - Term 3035 - 3061 -0.3 4 2 Op 1 . - CDS 3143 - 4849 876 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 4904 - 4944 1.2 5 2 Op 2 . - CDS 4977 - 6002 1004 ## COG0709 Selenophosphate synthase - Prom 6083 - 6142 80.3 + TRNA 6047 - 6141 28.2 # SeC TCA 0 0 + Prom 6066 - 6125 80.4 6 3 Op 1 7/0.000 + CDS 6156 - 7511 1044 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 7 3 Op 2 . + CDS 7477 - 9285 1224 ## COG3276 Selenocysteine-specific translation elongation factor + Term 9390 - 9426 2.0 - Term 9219 - 9272 13.9 8 4 Op 1 . - CDS 9282 - 9926 1043 ## RER_37430 hypothetical protein 9 4 Op 2 . - CDS 9940 - 10725 930 ## COG1351 Predicted alternative thymidylate synthase 10 4 Op 3 . - CDS 10796 - 11875 836 ## COG0095 Lipoate-protein ligase A 11 4 Op 4 1/0.083 - CDS 11941 - 13323 1612 ## COG0477 Permeases of the major facilitator superfamily 12 5 Op 1 . - CDS 13577 - 14668 1201 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 13 5 Op 2 . - CDS 14717 - 15757 1089 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 14 6 Tu 1 . + CDS 15847 - 16704 738 ## COG2301 Citrate lyase beta subunit + Term 16950 - 16988 1.1 - Term 16582 - 16635 16.8 15 7 Tu 1 . - CDS 16706 - 18289 1754 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Prom 18394 - 18453 2.9 16 8 Op 1 19/0.000 + CDS 18490 - 19671 826 ## COG4585 Signal transduction histidine kinase 17 8 Op 2 . + CDS 19668 - 20333 504 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 18 9 Tu 1 . - CDS 20412 - 22784 1139 ## Bfae_15770 HNH endonuclease - Prom 22804 - 22863 4.0 19 10 Op 1 . + CDS 22693 - 22908 121 ## 20 10 Op 2 . + CDS 22913 - 23149 85 ## + Term 23302 - 23342 1.0 - Term 23071 - 23114 11.8 21 11 Tu 1 . - CDS 23133 - 23498 381 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 23526 - 23585 1.5 22 12 Tu 1 . + CDS 23564 - 24544 503 ## COG2378 Predicted transcriptional regulator 23 13 Op 1 36/0.000 + CDS 24683 - 25429 242 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 24 13 Op 2 . + CDS 25426 - 27912 2344 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 27934 - 27984 16.9 - Term 27922 - 27970 12.7 25 14 Tu 1 . - CDS 28039 - 29325 1320 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 26 15 Op 1 . + CDS 29357 - 29467 59 ## 27 15 Op 2 49/0.000 + CDS 29428 - 30318 753 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 28 15 Op 3 38/0.000 + CDS 30315 - 31325 1017 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 29 15 Op 4 . + CDS 31469 - 33121 1761 ## COG0747 ABC-type dipeptide transport system, periplasmic component 30 15 Op 5 . + CDS 33118 - 34689 763 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 31 15 Op 6 . + CDS 34693 - 35874 909 ## CMS_1441 putative integral membrane protease 32 16 Tu 1 . - CDS 35965 - 36309 157 ## Svir_29020 hypothetical protein - Prom 36515 - 36574 1.6 - Term 36581 - 36619 -0.2 33 17 Tu 1 . - CDS 36680 - 36865 216 ## gi|295394393|ref|ZP_06804617.1| conserved hypothetical protein 34 18 Tu 1 . + CDS 36840 - 37118 131 ## - Term 37010 - 37077 25.1 35 19 Tu 1 . - CDS 37277 - 38188 593 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 38221 - 38280 2.6 + Prom 38198 - 38257 1.9 36 20 Op 1 1/0.083 + CDS 38302 - 38979 344 ## COG1309 Transcriptional regulator 37 20 Op 2 . + CDS 39028 - 40581 1718 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 40632 - 40680 13.2 38 21 Op 1 15/0.000 - CDS 40707 - 41735 1342 ## COG0059 Ketol-acid reductoisomerase 39 21 Op 2 32/0.000 - CDS 41784 - 42293 403 ## COG0440 Acetolactate synthase, small (regulatory) subunit 40 21 Op 3 . - CDS 42296 - 44122 1493 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 44264 - 44323 3.7 + Prom 44192 - 44251 3.6 41 22 Op 1 . + CDS 44410 - 45549 726 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 42 22 Op 2 . + CDS 45568 - 46173 519 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 43 22 Op 3 . + CDS 46227 - 46892 506 ## gi|295394402|ref|ZP_06804626.1| conserved hypothetical protein + Term 46941 - 46973 7.0 - Term 46921 - 46966 12.2 44 23 Op 1 . - CDS 46993 - 48480 1571 ## COG0591 Na+/proline symporter 45 23 Op 2 . - CDS 48477 - 48701 310 ## gi|295394404|ref|ZP_06804628.1| conserved hypothetical protein 46 23 Op 3 . - CDS 48698 - 49732 761 ## COG0523 Putative GTPases (G3E family) 47 23 Op 4 . - CDS 49729 - 51396 1354 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold - Term 51545 - 51577 7.0 48 24 Op 1 . - CDS 51598 - 53304 1784 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 49 24 Op 2 . - CDS 53377 - 54330 830 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 50 24 Op 3 . - CDS 54368 - 55021 552 ## KRH_16370 hypothetical protein - Prom 55051 - 55110 1.6 51 25 Op 1 6/0.000 - CDS 55117 - 55746 627 ## COG1045 Serine acetyltransferase 52 25 Op 2 . - CDS 55770 - 56702 756 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Prom 56785 - 56844 1.5 53 26 Tu 1 . + CDS 56878 - 57459 523 ## COG0242 N-formylmethionyl-tRNA deformylase 54 27 Tu 1 . - CDS 57490 - 58527 855 ## gi|295394413|ref|ZP_06804637.1| lipoate synthase - Term 58578 - 58621 13.8 55 28 Tu 1 . - CDS 58646 - 59215 625 ## gi|295394414|ref|ZP_06804638.1| conserved hypothetical protein - Term 59447 - 59496 20.0 56 29 Op 1 . - CDS 59541 - 64316 4485 ## cur_0492 putative cell surface protein precursor - Prom 64395 - 64454 1.8 - Term 64543 - 64577 7.3 57 29 Op 2 21/0.000 - CDS 64587 - 66065 1738 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 58 29 Op 3 31/0.000 - CDS 66075 - 67577 1705 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 59 29 Op 4 . - CDS 67581 - 67886 356 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 60 29 Op 5 . - CDS 67934 - 68776 501 ## COG0084 Mg-dependent DNase 61 29 Op 6 . - CDS 68773 - 69552 801 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 62 30 Tu 1 . + CDS 69661 - 71286 1069 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 63 31 Op 1 . - CDS 71291 - 73513 2006 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 64 31 Op 2 . - CDS 73510 - 74568 630 ## Krad_1311 hypothetical protein 65 31 Op 3 7/0.000 - CDS 74573 - 75736 1039 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 66 31 Op 4 . - CDS 75733 - 77001 908 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 67 32 Op 1 . + CDS 77036 - 77386 333 ## gi|295394426|ref|ZP_06804650.1| conserved hypothetical protein 68 32 Op 2 . + CDS 77398 - 77859 516 ## AAur_1567 putative integral membrane protein 69 33 Op 1 . - CDS 77930 - 79663 1319 ## gi|295394428|ref|ZP_06804652.1| hypothetical protein HMPREF0183_0150 70 33 Op 2 . - CDS 79663 - 80637 894 ## COG3118 Thioredoxin domain-containing protein 71 34 Tu 1 . - CDS 80772 - 82421 1444 ## Asphe3_24580 hypothetical protein - Prom 82451 - 82510 3.0 72 35 Tu 1 . + CDS 82553 - 83155 620 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) + Term 83216 - 83254 2.8 + Prom 83180 - 83239 2.8 73 36 Tu 1 . + CDS 83269 - 85032 1273 ## gi|295394432|ref|ZP_06804656.1| conserved hypothetical protein + Term 85065 - 85096 3.4 - Term 85036 - 85102 31.6 74 37 Op 1 . - CDS 85111 - 85890 548 ## COG0726 Predicted xylanase/chitin deacetylase 75 37 Op 2 . - CDS 86065 - 86586 437 ## gi|295394434|ref|ZP_06804658.1| hypothetical protein HMPREF0183_0156 Predicted protein(s) >gi|294972715|gb|ADNU01000007.1| GENE 1 2 - 943 861 313 aa, chain + ## HITS:1 COG:aq_1039 KEGG:ns NR:ns ## COG: aq_1039 COG0243 # Protein_GI_number: 15606330 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Aquifex aeolicus # 5 241 795 1011 1015 137 37.0 4e-32 KYVWWDQDQQRWTGSDIPDFPADRAPDYEPPEDAVGPAALAGDDPFIMQADGKGWLFAPT GVVDGPMPTHYEPPESAIPNPLYDSQNSPARMTIADDINLYAPGSGEAGKDVYPHVFTTY RLTEHHTAGGMSRWLPYLAELQPEMFCEVSPELAELEGLTHGDWATLITPRSAIEARVMV SERFTPLDINGRTVHQIGLPYHWAQGSHAVVSGDSANDLIGVTMDPNAQIQESKSIAVAI KPGRRPRGEALRDLVDKYRAEAGVTLDTGHDLPTQEGAVPPPGEGPTPVEGAEATRENQK WDDKRARFNRGDK >gi|294972715|gb|ADNU01000007.1| GENE 2 943 - 2013 712 356 aa, chain + ## HITS:1 COG:HI0007 KEGG:ns NR:ns ## COG: HI0007 COG0437 # Protein_GI_number: 16271982 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Haemophilus influenzae # 152 350 97 280 312 134 40.0 2e-31 MGQLAGATDPIADANWHTPHERKGFFTDSSICIGCKACEVACKEWNRNPQDGSLEMLGSS FDNTGGLGANTWRHVKFVEQGKDDIATARESGRKLVSLGMPQVRPANSSPEARATLPAPS EDLSNVDVLGGLANPTGSEATGADAQPDTPEFRWLMSSDVCKHCTHAGCLDVCPTGALFR TEFGTVVVQNDVCNGCGTCVAGCPFGVIERRDDGTVNTNPDREPLDQEVPNPGTANKCTL CYDRLVEGQTPACAQTCPTTSIKFGDHDTMVETAQERVAELRESGMTEARLYGANPNDGV GGTGSVFLLLDEPEVYGLPPDPRVPTADLPSMYKRAGVAALGMLAAATVAFLGGRK >gi|294972715|gb|ADNU01000007.1| GENE 3 2010 - 3104 912 364 aa, chain + ## HITS:1 COG:no KEGG:MAP0370 NR:ns ## KEGG: MAP0370 # Name: not_defined # Def: hypothetical protein # Organism: M.avium_paratuberculosis # Pathway: not_defined # 2 364 3 359 361 315 57.0 3e-84 MTQEFDSYRPPKREKRFRNFFGQGGKRKKRGRGGEDLMVDEAQFESYYGRPIVKAPPWKH EIGAYLVLGGIAGGSALLAAGAHVTGLHELRRNARLTALGAISAGAVALIADLGRPERFL NMMRTVKVTSPMSLGSWILGGFSTGAGVAAAAEVVRMLEGHIPGEDTALVKAGKKTLFAV ETPAGFLASALGAPLAVYTAALLSNTAVPTWNAARRGLPFVFASSASLAAGGAAMVTTSP AQAGPARLLALMGVAGDLIALTWTKKDMHPLEAEPLEIGHAGKLMHLSEACVIAGGVGTA LVGRNRVGAIVSGACLVAGSALTRFGVMDAGHASTQDPKYVVEPQKARLRARQQAGITHD SIVT >gi|294972715|gb|ADNU01000007.1| GENE 4 3143 - 4849 876 568 aa, chain - ## HITS:1 COG:Cgl2090 KEGG:ns NR:ns ## COG: Cgl2090 COG0488 # Protein_GI_number: 19553340 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Corynebacterium glutamicum # 12 568 6 548 550 365 40.0 1e-100 MSTTNSPASSPAHLQIEGISKSFGDRRVLTDISFSVPADSRVGLIGENGSGKSTLLRIIA GHTQPDTGIVRVSRPGGLATVGLLHQRPPFDMDDSVAHALESAVAHVRRATEAVEQASQA LAEDPYAPGAAEHLSATLETAQRLGAWEVDTRISTTLAGFGLAHLDRELPTGSLSGGERA RLSLVWLLLSRPDVLLLDEPTNHLDDAASEHLFQMLAEWTGPVLIASHDRAFLDESVTGL VDLDPRPVPHKAQDTSAGPASGVGVTRYTGTYTDYLDERRQVRNRWELQYEEEQAELKRL SATLRNSRTVGHPGREPRSEIRMAKKFYADRNAKVVSRRVNDARARLEELQQRQIQRPPR ELEFQGLTAANQPEPAKTGTVLSAVNVSVENRLATVSLTVGPSTKLLVTGANGVGKSTLL HVLAGDLSPSRGVLTRRSGVRVGMLAQETTLPDPHRRGSGRTVAQAYTDMVGVARAEQVP LSTFGLIAPWDQNRPVEALSVGQQRRLALASQLADPPDVLLLDEPTNHLSLALVTELEAA IPGYPGAVVVASHDRWLRRNWSGDVLEL >gi|294972715|gb|ADNU01000007.1| GENE 5 4977 - 6002 1004 341 aa, chain - ## HITS:1 COG:YPO2164 KEGG:ns NR:ns ## COG: YPO2164 COG0709 # Protein_GI_number: 16122396 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Yersinia pestis # 16 319 7 307 348 254 47.0 1e-67 MSLGYAGAMTAHDLPRLTSLAHGGGCACKIPPGELEEAVKGLAGQDYDSVVVGLDDGDDA AAVSIGNDTLVLSTADFFTPVVDDAFDWGRIAAANALSDIYAMGGTPVVAINLVGWPREV LPPSLLKDVLAGGLEVGKQAGVPVIGGHSVDDPEPKYGMAVTGTVTPDALMRNDAAKPGL PITLTKPLGVGILNNRHKATGDVFPEAVESMTTLNRDAAVAATQAGITAATDVTGFGLLG HLFKMCRASGVGARIDMSAVPVLDAARTSVSEGFIPGGSRRNLDWVKSNLAEQFQVDSGI SDDDVILLADAQTSGGLLLVGEIPGHPVIGYTTDEPGIQIS >gi|294972715|gb|ADNU01000007.1| GENE 6 6156 - 7511 1044 451 aa, chain + ## HITS:1 COG:STM3683 KEGG:ns NR:ns ## COG: STM3683 COG1921 # Protein_GI_number: 16766968 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 9 421 12 452 463 215 36.0 1e-55 MSEDPRRNLPRTDTLLASDWVRAASTRLNATTTRAIVRRHLDRARTQPSFTSASFRDDLV ADLTRFNSGIYRATINATGVVVHTNLGRAPLSPWASEVAGHTAAYVDIEMDLESGKRGRR GVETTDALTLHVPAAEDALVVNNCASALMLVAAQSRPGRILLSRGEFVEIGAGFRLHELM RSVGATITEVGSTNRTHLADYRRECEAGEVSAILKIHPSNYAQSGFTSSPSTQALAQLAR EYDVPLVVDIGSGLLAPNPHLPNEADATSELEAGADVVLFSGDKLLGGPQAGIILGKREL VTQLATHPLARAVRASKFVLATLAATVVGEEPPVHTYVGLSSEKLRERTEALAATLNAAE VSVDITPHAGRVGGGGGTGVELPGWAVRLPESFAKPLRVGEPSVVTHVQDGACLVDVRCV DPSDEHVLASRIIECARAAGNAGAGTAHTGH >gi|294972715|gb|ADNU01000007.1| GENE 7 7477 - 9285 1224 602 aa, chain + ## HITS:1 COG:SMa0015 KEGG:ns NR:ns ## COG: SMa0015 COG3276 # Protein_GI_number: 16262460 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Sinorhizobium meliloti # 16 600 2 630 666 199 31.0 1e-50 MQARELHTRVTDMSFVVATAGHVDHGKSALVRALTGSDPDRLDEEKRRGLTIDLGFAHCT LPSGTHVSFVDVPGHERFIGNMLAGLGPAPIVCFVVAADEGWSAQSTDHRDALEALGITR GVIVLTKCDSATPEQIDHVSSQARTELSCLPDAPLVTTSAVTGDGLPELLAALDAVTSAT PPPATDGRVRIWVDRAFSITGAGTIVTGTLGEGTVTTEQNLELTSAQARTRITVRGLQNH NSAVSSIAPVSRVALNLRGVSAQDISRGDALITPDAWHVADVVDVAGVAVDTIPTDVTVH IGAASFQAHVRPLSHRFARLKLSRSIPVQVGDRLVVRGSGERAVLGGLTVLDVDPPELFR RGSAAERAHALDHYSPADFTAELTRRGCVRESALTTFGYDVPGEADQLPAGVQRMGAWLV RDDVVRTWVAQVARVIEDDARDPLSRGVPLAQLAKSVGCPRELVEGLVESPAEVVSGFAR LPGSGSLGAAEAGVAELERRLSEHPFDAPEARDLEDLDLGVRELAAAEQAGRLLRLDGGV VVLPSTPARAMRVLAGLAQPFTLSQARQALDTTRRIAIPLLEHTDARGWTTRVDGNLRRV RG >gi|294972715|gb|ADNU01000007.1| GENE 8 9282 - 9926 1043 214 aa, chain - ## HITS:1 COG:no KEGG:RER_37430 NR:ns ## KEGG: RER_37430 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 4 195 7 209 209 116 35.0 7e-25 MSDIYDAELKPSKNQVLATVLGTDEADIEKLASYRFDDPAGQIGMEVHIVRTPDGSVLQV PLVYRPEPLEDAEEDELITTMEHSVLGTRYVYLGMSDPVFAEALDVTISEEQGGAEQFLV EGDTRTPITEGLATVTGTGEIELEEEEDDENLIGVLELFAELDLDGLSEEEASQPGQLIG TWEGQNTPVLLAHSGLVYVDEDELEEFDEEGDEN >gi|294972715|gb|ADNU01000007.1| GENE 9 9940 - 10725 930 261 aa, chain - ## HITS:1 COG:MT2824 KEGG:ns NR:ns ## COG: MT2824 COG1351 # Protein_GI_number: 15842292 # Func_class: F Nucleotide transport and metabolism # Function: Predicted alternative thymidylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 41 249 28 232 250 97 34.0 2e-20 MRPVEPSVELISRPKIDWEEITAYLEEVGGTAWSDRVREQDSPDSEDLLEFAGRMCYRSW EPGLNPNVGRVRTDSTQYLGNVVASQHGSVLEHASYTFILHNVSRVFTHELIRHRAGAAY SQESLRYVRLEDIPFWFPEWAREDEELMKRSLDLLDRMEEHQKWMSEHFGLDEEGQNFTH KKHMTSFMRRFAPEGLATGIVFTANLRTLRHVIEMRTAKGAEEEIRLVFNKIGEIMKKEA PAIFADYTVEDGEWIPGTRKA >gi|294972715|gb|ADNU01000007.1| GENE 10 10796 - 11875 836 359 aa, chain - ## HITS:1 COG:Cgl1050 KEGG:ns NR:ns ## COG: Cgl1050 COG0095 # Protein_GI_number: 19552300 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Corynebacterium glutamicum # 5 358 4 351 352 400 58.0 1e-111 MNTFHTERKVPGGKLVVVDGELTDGVITHAQVSGDFFFEPEEAYFALAPALVGVSIADSR ESITERLDKAVTQAAAEVGAQVDLQGFTTADVAFAVRRGLTGATDFWDHEWEVFHDESRP TVENVALDQVLLEEVAAGRRKPTVRFWEWDDTAVVIGSFQSYSNEVEPEGIARYDVQVVR RISGGGAMFMEGGNCVTFSIYAPDSLVAGLSYEESYAFMDQFILDALTQLGVKASYEPIN DIVSQHGKIGGAAQKRVSTGAVLHHDTLSYDIDANKMVEVLRIGKAKISDKGVASAKKRV DPLRSQTGVSRELVIDTMIDTFTRRTGASSGGVTAQELERARELIDTKFGTEEWTRRVP >gi|294972715|gb|ADNU01000007.1| GENE 11 11941 - 13323 1612 460 aa, chain - ## HITS:1 COG:PA3467 KEGG:ns NR:ns ## COG: PA3467 COG0477 # Protein_GI_number: 15598663 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 28 460 24 451 455 196 32.0 9e-50 MNRVATEVPTAQQVVSNLPWKWNVQGAIFIVGGLGFVFDAWDVALNGFLIPLLAKEWGLS IGQAAWIATANLIGMALGAFIWGGIADRMGRKKAFTLTLLIFSAFTVLGAFAPNYALFLI FRFCAGFGLGGCIPVDYALVGEFTPTKHRGRVLTAMDGWWPVGATLCAVVSAWLVSFASW HTIMLVMVLPALLIVAVRFFIPESPMYLLSQGRHQEADAVIRKLVTRTGANVTEWSHDGV EEAPKAAPLMQRLRAMTGQVNLLWQYSWKITLTSWILFISVLLLYYAALTWLPGILKKQG LTDQAAFITTGGMTAIGIAGVVASALLIEVLGRKWVLGSSAVLASGALVWFALELENSGT QLSRAAVIAILLFGFLIQVSVPALYTYVTELYPTRLRSSGFGWASSASRVAIGIAPIVFG SLLWPTIGLVNTFALTGALVVVAVIVMVAFGRETAGEELD >gi|294972715|gb|ADNU01000007.1| GENE 12 13577 - 14668 1201 363 aa, chain - ## HITS:1 COG:XF1999 KEGG:ns NR:ns ## COG: XF1999 COG0115 # Protein_GI_number: 15838593 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Xylella fastidiosa 9a5c # 21 362 22 360 362 394 57.0 1e-109 MSTFVQQKNSQPAPQGVREAILAKPGFGDYFTDHMSHVRYTKDQGWHAHTVKPYGPLVLD PAAAVFHYAQEIFEGMKAYRHADGSVWTFRPTKNAERMNKSAARLALPEISAEDFVGSLR ALVELDEAWVATPKDAADEVSLYLRPFMIASEKFLGVRASHEADYYVIASPAGPYFAGGI KPVDIWLSKDLKRAGTGGTGFAKCGGNYAASLQAGNQAAEKGCQQVMFTDAKESKYLEEL GGMNLMLVTKDNELITPSVSETILDGVTRRSLLELAPSIGLTPVERDIEVAEWRERAAAG EIVEAFACGTAAVITPIGRLVSDDFTIEQSTEPGEAAMKLRSTLLDIQYGRAEGPEGWMV KLA >gi|294972715|gb|ADNU01000007.1| GENE 13 14717 - 15757 1089 346 aa, chain - ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 5 345 2 338 340 395 60.0 1e-110 MTTFKIAVIPGDGIGKETVPEGLKVLKRSIEASGDSVELDLKEFGPSAERYLETGETLTD EELEQLRAHDAIFFGAIGDPRVPSGVLERGVIIKLRFELDHAINLRPSRYFPGTSSPLKD PGNIDFIVVREGTEGSYSGQGGFLRAHTEHEVANEISVNTRYGVERAVRYAFEQANKRRQ KLTYVHKTNVMVHAGNLWERVVKDIAPEFPDVAVNYEHADACTMYVVNDPQRYDVIVTDN LFGDIISDLAAAVTGGIGLAASANLNVTGTGPSLFEPIHGSAPDIAGEGIADPTATILSA ALMAQNLGMDVVAKAIETAVEADIVERGDAKRSTSEIGDAIAQRIG >gi|294972715|gb|ADNU01000007.1| GENE 14 15847 - 16704 738 285 aa, chain + ## HITS:1 COG:MT3160 KEGG:ns NR:ns ## COG: MT3160 COG2301 # Protein_GI_number: 15842645 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 17 282 25 286 307 210 46.0 3e-54 MPTTIRNKRAAALPAKLSRSWLLVNAIRPESFEPAQTSEADSVIFDLEAAVPDVSKDQAR ANVVKALSTDMAGWVRVNSITTPLWEEDLDALNGLPGLKGVMLPNTEEPDQVTLTAMRAG AGIPVLALIETAIGIEAATRIAQAPGTFRLALGTNDFRKDTGVGDDPMALAYARSRLVVA TRVGGLPGAIDGPSPASANSKALLHDCGWTLKMGMTGKLILNPQQAVTTNDALAPSEDDR TWARKMLEEAETAGDDAIADGSYLPRLARAKKIAQLSDSYGLWKN >gi|294972715|gb|ADNU01000007.1| GENE 15 16706 - 18289 1754 527 aa, chain - ## HITS:1 COG:ML1692 KEGG:ns NR:ns ## COG: ML1692 COG0111 # Protein_GI_number: 15827900 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Mycobacterium leprae # 3 524 4 527 528 442 49.0 1e-124 MKPVVLIAEELSPATVDALGPDFEIRKCNGADRAELLPALKDVNAVLIRSATKMDAEAIA AAPELKVIARAGVGLDNVEIPAATRAGVMVVNAPTSNIISAAELTMAHILGSARNYGAGH ASLKAGEWNRSKLSGVELYEKTLGIVGLGRIGGLVAERAKAFGMNLIGYDPYISAARAAA MGVTVVSLDEVLEQSDFITVHMPKTPETIGMIGEEAFTKVKPTVRIINVARGGIVDEAAL AKAVEDGRVGGAGIDVFTQEPPVDSPLMAHDRINVTPHLGASTAEAQEKAGIAVAQSVRK ALAGELVPDAVNVAGGAIDPQVRPGIALTERLGRVVSAMAGDPVTHLRVEVRGEVTQKDV SVLKLSALKGLFLDVVDGAVSYVNAPLFAQERGVTVELATEPLSENFRNVVTLVAATSAG QQIRVAGTVTGPKDVQKLTEIDGYDLEMKLSDHLVFFKYDDRPGVIGLFGQALGNLDINI EAMQVSPNNDQALAVLAVDSEVSAEVVNTVASEIGASFARVANIEEE >gi|294972715|gb|ADNU01000007.1| GENE 16 18490 - 19671 826 393 aa, chain + ## HITS:1 COG:BS_yxjM KEGG:ns NR:ns ## COG: BS_yxjM COG4585 # Protein_GI_number: 16080941 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 156 389 166 393 406 85 28.0 2e-16 MSAHMWVVDSLIFAAPLVLFTVVFPAYEPGLRGVIQTVVLVAMCASLVFRRTFPLVTGWI VVATGFVYALTFAFPHHALITVPVTVHAVTAYAPRRWGKIFLGIGIVAAFVFAASNFTYF HVSGARLSDATAGELLFIVLAALVFPMVTVALAWTLGDIHWRKRYDAQRIAERNALLERE RENEIRLASDAERMRIAREMHDIVAHSMSVIITQADGGRYAAKASPQAAVDALETIAETG REALGNLRGMLGVLRDPSASAQTTPMPGIEDLGALVENVRAAGLEVTLHVAPDVPALAPA AQLAVFRIVQEALTNTMKHGGPEARAEVTVEPGELGVVARVVSTGRAESAVAPGSGAGIQ GMKERAHIHGGSLVAEPTETGFLVELSLPEDVA >gi|294972715|gb|ADNU01000007.1| GENE 17 19668 - 20333 504 221 aa, chain + ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 3 215 2 208 219 155 42.0 5e-38 MTVRVLLVDDQVLVRAGLAMVIDSQDDMRVVAQAENGREAVEAVRAHAVDVVLMDIRMPV LDGLSATQEIVALGDAGALPQVPTIIVLTTFDTDDYALTALRSGASGFLLKDARPEVLLD SIRQAHVGGAVIAPTTTRRLLETVVAAPTVPDEHAQKLERLTAREREVFELVARGKSNAE IAGELFMAGPTVKTHVSHILTKLEVRDRIHAVIFAYEAGVV >gi|294972715|gb|ADNU01000007.1| GENE 18 20412 - 22784 1139 790 aa, chain - ## HITS:1 COG:no KEGG:Bfae_15770 NR:ns ## KEGG: Bfae_15770 # Name: not_defined # Def: HNH endonuclease # Organism: B.faecium # Pathway: not_defined # 538 651 171 285 360 88 41.0 1e-15 MTTTHTHTRNDMHDGPAVELFETVKDTTRIMDEAQVKQAEAVAAVISAHIVPLDDFTHGL HAVFTSNPGAGPLVTNGAAGESLSAGPTAGGSVGVDDVVACVVLPTGEVATVASVERVPD VLPTPTEGVLAKLLDCTRSQLITRLRKVMTAVVLMPKLWALAKAGVISFDRVLYTAGRVV RAGVCIPVFDDMLTNKRVNVPWKTYRRHVNEILAMLMTPETRVENARRNRGVTYWVNDDG TATLSLTGPVLEMEAFYQRVRGTARAILANHIEPFTARLTDEQQALFMTENNGETTEIRV GDLGRVEVDDDRLMDQLTLDLITGAKPSTTLRVRVVPTGKHAPITVTYTKDTFGPDTPGT ENARSDKGAESDGAFEAGVPGMDTRGNAGGPGPGESGSVWAEKREARQAEDVYELELCVS MPEKDEWLKAQAGITVTVPVLHFLMGTPPPNKNRDKYRGAGSGKDPGPDRHRPENQDSGR YETEDRQSGRIHESRKQRTEEQVFEDQGSSAPPGTDAPPGDGAGSGLDFGLPVKVDPGAR VPVMMNGRVPLDAKTADELIAQAKWAYRMFTDPQTGVVLESTPTKYYIPAALKRMVEARH PDCSVPWCATPARVCEKDHIEPFNHKDPENGGLTVMENLHPLCKRHHQEKTQKRLRVDKM DDGSLARVFPRIGAMLVYPPESRINQLQYERLLEYFDTGDQDISHTINEYLATEHQTAHR PETGTGHGAEPAEADSPESTVVNRPEPAAAPSRGRAHEYPREIADEYAIAAEVFNGDTRP WEPSEEPPPF >gi|294972715|gb|ADNU01000007.1| GENE 19 22693 - 22908 121 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMRVVSLTVSNSSTAGPSCMSLRVWVCVVVMWVHLLVWFYSICVRMRESRVLFILFLFVF ERAFSCGDERR >gi|294972715|gb|ADNU01000007.1| GENE 20 22913 - 23149 85 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRQALSCGHDKRSVVNPPSNLASEYATPVPLHTQSAQKTRLPMKTHSRHTITVNTEDGG EHALTATQRPQISVSRQD >gi|294972715|gb|ADNU01000007.1| GENE 21 23133 - 23498 381 121 aa, chain - ## HITS:1 COG:mll3207 KEGG:ns NR:ns ## COG: mll3207 COG0346 # Protein_GI_number: 13472798 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Mesorhizobium loti # 1 117 1 117 131 72 31.0 1e-13 MSAPNLFLIYVSDVERSTVFYSDLFDIEPTFTSPRYVAFEVAPGVLFAVWTGHNENVTRG TPRTSEVGLMVPQSSVALDDVYKEWVGKGVRVVKEPYDEVFGRTFVIADPDGNLIRVSPV D >gi|294972715|gb|ADNU01000007.1| GENE 22 23564 - 24544 503 326 aa, chain + ## HITS:1 COG:BH0411 KEGG:ns NR:ns ## COG: BH0411 COG2378 # Protein_GI_number: 15612974 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Bacillus halodurans # 9 323 1 318 331 104 26.0 3e-22 MFSVKFETVKASRLLSILLLLQTHERMTSKELARRFEVSPRTILRDVEALSAAGVPVFTE QGRNGAIVLDRRARLDLARLNPVELQLITVAGVDPDLLKQIGLQAVHSSVHEKLTAATSR THLSPTSQLSDVLLIDSSGWFTTGTEHDLTGLLTAAREQRRIRLCYRRSGEPRGNWITVD PYGLVSKANSWYLVADVNEEPRMFNTSRVEGHELLADVATLRPGHDLRSVWADLLASFRP TPHIEIRALLRSTRLDLAQRILGTRIANVTTTSGQWTPIAVHYPDVESVRQLLQFGDHIR IQSPASAVKRFHELATQIAQAHAPTS >gi|294972715|gb|ADNU01000007.1| GENE 23 24683 - 25429 242 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 244 1 262 329 97 28 2e-19 MNKSLTTAQPAICARGLSKTYGTGEAHLTVLDNFDVDIRSGQFTAIMGPSGSGKSTLMHI LAGLDTPDSGTVTLAGLAITGISDTKLTRIRRAHMGFIFQAFNLVPAMTADENIMLPSKL ARKNIDLDFKNAIVENLGLGERLTHRPHELSGGQQQRVAVARALVNQPDVIFADEPTGAL DKRSGTEVLETLRSCVSEMGQTVVMVTHDPAAAAYADRVVLLADGRIAGEVFDPTVEEVS QALLEVTK >gi|294972715|gb|ADNU01000007.1| GENE 24 25426 - 27912 2344 828 aa, chain + ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 6 825 14 851 853 181 25.0 4e-45 MIVKANLRSGGSRLVAAGITVMVSVAFVVAVTSLLTAFNNTMRDQFSVQYSGADLLVSPD ENELTDKTQKTVSSVDGVKDTQIIDQGSVFTTSDEFAFVSVWPKHSGISITEGQAPSKKG ELLYDAKLAEKHNKKVGDKVELVVPSEDGEGKDTHTFTITGLAQVPSSVPMFFATDVSNL YSAADHMRVFVDNPSEVAQVQDAVAKALAGSKDVKTEDTGAKSAGGLQVSTPDQIVQQRM KEMTGQATTLVAFIAAFIIVALFVAGLVISNTFQVLVASRTRTLALLRAVGATRSQLRNA TLAEGAVLGLISAILGVFVGWGFAILLTLAARAFFQPTFALAPLTLLAAVLGLAVGVTVT VIASFWPALKTTRVSPIDALAPADIPAPASRFPWIRLVVGTLLTVVGVAVLLLGAAMGEL LLALPGGILAFSGVLVLSRVFVPPMVAMIGRAGEAIFRSPALGLVARNVKLSPRRTASTT SALLVGVTLVATILVGAQTARTTVNNGLNQNDPIDVVATSTSDKTADTIKKSDAVDKFVS LPGVQAKASVPLGHDLDEKDESLTQVVGVDTHDQAIKDVPRDTHFLPEPGTVNVRDTPDT KKHDGKKVDLTVGNKKVSLTLKTVEGVPPNTVVANKADVTDLGLEDSNGQTWVRVTNSAS VPDFSKLQAELESAGVVAYIDGASLRAMFSQILNIMTGIVLGLLATSVIISIVGVGNTLS LATMERKRETALLRSMGMSRWSAAFMVAAEAVLMALTSLVVGLGLGILFGWTGVQSLVAA GGVAVSLGIPWLMLAAVAVVALVAALAASVVPAITASRTQPAQGVAMQ >gi|294972715|gb|ADNU01000007.1| GENE 25 28039 - 29325 1320 428 aa, chain - ## HITS:1 COG:Rv2416c KEGG:ns NR:ns ## COG: Rv2416c COG4552 # Protein_GI_number: 15609553 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Mycobacterium tuberculosis H37Rv # 81 401 70 381 408 136 34.0 7e-32 MTEYIFETFKPTITDNTPDEKTTNYIHAVRAGFHDKRVSGEKLLQRVKRAIADDRVFTAA YSQESYDHALDSDIPVATFAHFEKNVNVGGGKLIPAHLITWVTVRPTHRRRGLLRRLMTE NLSNAADAGYPFAALTVTEGGIYRRFGFGAASWLTDLEVDTSPGFQLISEPDRRVEMCDA QALQELAPQIYAEFQKKSPGAIGRQQALYDFAAGHDIETGEADDAVRGALHYDENGKPDG FVSFKHNAGDDWSHGTLELLDFIAVSNDAYSALWAFLGAIDLSVKVKFNNAAHQSPLPWL LTDPRRAKIVNENDGIWLRILDVKKSLEARAWLVGGELTLRINDDMGFADGTYRLVSNGQ EATVTKLDDGEPADLEMNVSELGSLYLGGADPVVLARAGRITEVRPDAALEARSLFALER APYTPNDF >gi|294972715|gb|ADNU01000007.1| GENE 26 29357 - 29467 59 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSTTGYAVGYVPAHNLYPYRGTEWNVLRRASNGRA >gi|294972715|gb|ADNU01000007.1| GENE 27 29428 - 30318 753 296 aa, chain + ## HITS:1 COG:PAB0093 KEGG:ns NR:ns ## COG: PAB0093 COG1173 # Protein_GI_number: 14520362 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Pyrococcus abyssi # 8 295 14 285 287 177 37.0 3e-44 MERVATRIKWPRLMSNSTARAGFVIVVFFLCMVPAAPILTALTGNDPHSFNTDLLRPDAV PAGTFGGMSFQHPLGVEPKTGRDLLAIVTWGSHVSLFIGLASTAVSVLIGVVVGVAAGFF GGVWDRLLSRITDIVFGFPFLIFAIALAAVIPPEVNRSLVLVAVIGLFGWPSIARVVRAE TLSLRTRGFVRASIAQGASGIRTITREILPNLLATILVFTTLSIPGKIGAEATLSFLGVG VDPSTPSWGRTISDAIDWVQVDPAYLLFPGLAIFLITLGFTLLGDGLRDAVAGEKA >gi|294972715|gb|ADNU01000007.1| GENE 28 30315 - 31325 1017 336 aa, chain + ## HITS:1 COG:BMEII0209 KEGG:ns NR:ns ## COG: BMEII0209 COG0601 # Protein_GI_number: 17988553 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Brucella melitensis # 6 331 2 312 315 202 37.0 6e-52 MKWWPVTRFLLSRLAGSLVVLLVIAVASFAIFYMLPNDPAQLSCGKPCTPERLAEVRAYM GIDKPWLVQLGAFLWGIVAGRTFGSGQAAIECAAPCFGYSFRLRADVSDLLADRIPVTLS IAIGALVLWTVVGVAMGTWAALRRGRFTDRALTSLSVVGVSAPTYLVGLLFILLYGFTLN VLPIGGYVAFTDSPFQWAFHLILPWVTLAIVNAAIYVRFTRGSMLDIMSQDFIRTTRAIG LTEGQVVGRHGLRNLVVPIATLVALDFGSLLGGAVVTEKVFSIQGVGSLLLDAVNNLDVQ LVVGVTLFAALAVVLANFLVDIIYGILDPRIGAPTS >gi|294972715|gb|ADNU01000007.1| GENE 29 31469 - 33121 1761 550 aa, chain + ## HITS:1 COG:SMc04293 KEGG:ns NR:ns ## COG: SMc04293 COG0747 # Protein_GI_number: 15965704 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Sinorhizobium meliloti # 83 516 69 499 538 149 29.0 2e-35 MKHLKSLSAIFLATTMAVTGCNANNFDEQKSGLGETAKGGDLTILTSGTEMDMDPGKSQG LAITSLGLVARRLTTWKIQPDTTPEVVPDLATDTGTPSEDGKTWTFTLKDGVTFEDGTPI TSKDIKYGIERSFSKELSGGLSYHKTLLKGADKYAGPFDGKELDSIETPDDKTIVFHLNE AFGDWPWIASMPAFTPVPKDKDKPAEYGNAPVASGPYRVESNTPGTSMVLKRNDNWNQDT DKVRTAGPDTITFKMSQDPTVAAQSLISDSNEAQTSFGADFIPAAQLAQAQKNPSAKSRL VTSDDGALKYLAINTERISDADVRKALNYAVDKNAVRIASGGEISGSFASTLISPGIPGR QEYNLYEAPDSGDAEKAKQLLEGKDVGTLTLLTRNDPISSAQAQAISQSLSKAGVKVRIK AEDTNSFSADATQGEGDYDLALSSWQPDFPSANANIEPLFASSQIGNGNYNISRYSNPKV DDMISKATHTIDDKEAQKLWAEVDKAIMEDAPVVPLMYTKNSFMHGSKVENFIIGSFPAY PNYLKVSLSQ >gi|294972715|gb|ADNU01000007.1| GENE 30 33118 - 34689 763 523 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 4 509 9 528 563 298 36 6e-80 MNALEIRNVSVSFNGAEVTHDVSFDVPASSVVALVGESGSGKSVTALSLLGLTGASVTGE AHLADGPELISASPQLLRSVRGKRIGMIFQESMGAFDPMYTIGYHVREAMRAHGTEASVT EVLKKAGLKDPDRIAGSYPHQLSGGQLQRAMIALATVHSPELLIADEPTTALDVTVQAGI LNLLRDVAQERAVLLITHDMGVVADVATHVVVMKDGRVVETAGVRDLFENPQHPYTRKLL QSVPRITDRAAEEQDASETVAARVEHARVEHGSTVALNDVSLTIPAHTIVGLVGESGSGK STIANVLTGAQKLASGTAEVAGTAVVPGTSRQQRRLRSRVGVVFQDPAGSLNPRRTIGAQ IAQPFELHTRLSRRDIARKVDGLLGDVQLPVEFARRFPRELSGGQKQRVAIARALALEPD LLIADEPTSALDVSVQTGILDLLAELHEKRQFASLFISHDLAVISQVASRVVVLRDGRVV EEGETGQVLGAPSSDYTRSLIEAAPVPDPVEQELRREKSRGYR >gi|294972715|gb|ADNU01000007.1| GENE 31 34693 - 35874 909 393 aa, chain + ## HITS:1 COG:no KEGG:CMS_1441 NR:ns ## KEGG: CMS_1441 # Name: not_defined # Def: putative integral membrane protease # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 44 325 134 409 450 176 39.0 2e-42 MTTSHGVTPPNVPHSHNGPFETPAQEPRSEPFENHYRTAHNRWWMGLVGIVATLIVFFFV SIVGGIVAVAIDIATGATSQEDAMAGKITNTPLLLFTVNLSLILGGLVALLAHRILHKQP WSRMFSVLPRMRWKWWGLSLACTVPLFALYMGVGFLFDNGAIQGSGDSSFTFDGTALAYL LIIVLTTPFQAAAEEVMFRSYVPRVFGSWIPRVGGIVGVIVATILFTLAHGASDPWLWAY YAVFGLVMAALTHFSGGIEAPVVVHAVNNVTMFIIALLSGDISNAFDRGEGSGGAFMLFP MVALIVIAGVLTLVARWRKVATAAPVHVRPVKQAQVPYGVPGQGAPGQPGVQAGQPQGQL QGQVSPAQPGQAPQGHLQQSFEPPADPTNRPHA >gi|294972715|gb|ADNU01000007.1| GENE 32 35965 - 36309 157 114 aa, chain - ## HITS:1 COG:no KEGG:Svir_29020 NR:ns ## KEGG: Svir_29020 # Name: not_defined # Def: hypothetical protein # Organism: S.viridis # Pathway: not_defined # 23 111 144 232 235 79 44.0 4e-14 MTKVGRTTRRPQRRGGKDGIPALQDLHFPLGGHRFRPALEDILEMLIDEFNVDHERGARD VLAEARAAWRMTQTKAAVRDAPGAAVEALTALGYHITAPDSASATRHVDRLRSL >gi|294972715|gb|ADNU01000007.1| GENE 33 36680 - 36865 216 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394393|ref|ZP_06804617.1| ## NR: gi|295394393|ref|ZP_06804617.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 61 19 79 79 99 100.0 8e-20 MSESTVTYMSPEQLQARYNELASRVGDLEEFKVRGANYDLDADDAAIYDELRDLEFLLRR D >gi|294972715|gb|ADNU01000007.1| GENE 34 36840 - 37118 131 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYVTVLSLMIAHFSSRKMSVSVYFTNTLPAAAVQTSSRPDEPPRPVARVYPAHATSGPNE TAQSERNYALYCVVSLTLRLLGLAKSPGPSLT >gi|294972715|gb|ADNU01000007.1| GENE 35 37277 - 38188 593 303 aa, chain - ## HITS:1 COG:mlr3829 KEGG:ns NR:ns ## COG: mlr3829 COG0451 # Protein_GI_number: 13473282 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Mesorhizobium loti # 9 291 11 300 318 72 26.0 1e-12 MSFLVVGYGQIGRELVRQLTERGDRVTVVKRSGMPQRRGAEVIQGDVQDALSELGSEGFD GVFNCMHAPYSARAWRDALIPREKQLLEWAGDVPVVFPESVYAWGAGAQELKEGEPVEPA SPLGEVRAQLLRNREAYGGKTVSVVAADLIGPTASLAGAVFHQLVFDRVMKGRHPLGMGD VRAPRSITYIPDLVRGMMYAVENAHDLPSVVHAPAAGPVSQVELARAFARVASKPEPSGV FQIPWTVMKVTGLFSQTFRELHNQKYLWDSPQVLHAGVLADLPVTSLDAALVGCVSGREG ASL >gi|294972715|gb|ADNU01000007.1| GENE 36 38302 - 38979 344 225 aa, chain + ## HITS:1 COG:MT1864 KEGG:ns NR:ns ## COG: MT1864 COG1309 # Protein_GI_number: 15841286 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 9 205 12 217 234 119 35.0 4e-27 MTTRKPHAESRAQMRKGIITHGTRLLEKHGHAGLSLREVARSMGVAPSALYRHVKNRDEL LTVLLVESFNRVADHVEKATHTATTPHARLHALTHALLEWAQRHPQLWALMYGTPVPNYA APAESTTEPGTRVLTLFVHTVAHFDLGTEPASPALIEELARGATDLGAEMSPERATGAVL AWTSLIGLINAVQFGQLGPELTDLGSDLLDSWLRNLLGTRTGRTL >gi|294972715|gb|ADNU01000007.1| GENE 37 39028 - 40581 1718 517 aa, chain + ## HITS:1 COG:mll3567 KEGG:ns NR:ns ## COG: mll3567 COG0028 # Protein_GI_number: 13473079 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mesorhizobium loti # 1 517 1 517 517 436 50.0 1e-122 MNGAHSLTQTLLANGVDTVFANPGTSEMHFVAALDDTPEINCILGLFEGVVTGAADGYAR MKDTPAATLLHLGPGLANGLSNLHNAIRAQSPIVNVIGDHAIYHRQYDAPLTSDVEGAAR PFSHWVRTTANADSVSHDTAAAIAASLTNPGQIASLILPADSAWNPVENQQEPEKAFVPA AGIPADDIIEGAAAALKKAKNPAILLGKNALREVPLRSAGLIAEATGADLLCPNMVARVT QGAGRVPVKRVPYATPAAVDFLKDYDLLVLVGSKAPVGFFAYPNRPSALTPPAMHVVELA QPRHDLTASLEALVTAVGADSAKEATTSALDLPDLPTGSITKEKLGDLLANMIPENGIVI DESITTGFTFFSTAATAQPHDYMLGTGGSIGYALPTAAGAAVACPDRKVICLESDGSGMY MPQSLWTYAREGLDIVVVIFSNRKYQILRDEMRNVGADFGGPRAEALMDLTNPTIDWVSL AKSMGVDGQAVDNMDDLATAFRAGLDAQGPYLIEVVM >gi|294972715|gb|ADNU01000007.1| GENE 38 40707 - 41735 1342 342 aa, chain - ## HITS:1 COG:ML1694 KEGG:ns NR:ns ## COG: ML1694 COG0059 # Protein_GI_number: 15827901 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium leprae # 5 328 2 325 333 405 61.0 1e-113 MVERYYDDNADLSVIQGKKVAVVGFGSQGHAHALSLRDSGVDVRIGLAEGSKSRDKAAAQ GFEVGTPGEVADWADVVVILAPDQVQADIYENEIKDKLSAGKTLVFSHGFNIRFGYIQAP EGVDVIMVAPKGPGHIVRREFVDGRGVPVLVAVEKDETGSAWDTVLSYAKAIGGLRAGGI KTTFTEETETDLFGEQAVLCGGVSHLVQAGFETLTEAGYQPEIAYFEVLHELKLIVDLMV EGGIAKQRWSCSDTAEYGDYVSGPRVITPEVKASMKAVLDDIQNGSFAKRFMDDQKNGAK EFNELRAKEEQHPIEATGRELRKMFAWLKDSDDDYTEGTAAR >gi|294972715|gb|ADNU01000007.1| GENE 39 41784 - 42293 403 169 aa, chain - ## HITS:1 COG:MT3082 KEGG:ns NR:ns ## COG: MT3082 COG0440 # Protein_GI_number: 15842560 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 162 6 164 168 175 60.0 4e-44 MSRHTLSVLIENKPGALTRFTGLLARRGFNIDSLAVGTTEIEEISRITVVVDVRDTPLEQ VTKQLNKLINVIKIVELAPEQSVRRAHVIFKVKADPQARAHIASTCELFRAHIIDVSADA VCVEATGEQSKLDALRRVLEPFGIREIVQSGTVAIGRGGKSISDKALRN >gi|294972715|gb|ADNU01000007.1| GENE 40 42296 - 44122 1493 608 aa, chain - ## HITS:1 COG:Rv3003c KEGG:ns NR:ns ## COG: Rv3003c COG0028 # Protein_GI_number: 15610140 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mycobacterium tuberculosis H37Rv # 3 606 11 615 618 770 64.0 0 MATTQPAPASATRAHPVPKRTSPENLTGAQAVIRSLELLGVDTVFGLPGGTILPTYDPLL DSKTINHVLVRHEQGAGHAAEGYASATGRVGVCMATSGPGATNLVTALADAHMDSVPILA ITGQQSSALLGTDAFQEADIVGMTMPITKHSFLVTRAEDIPHAIQSAYHIASTGRPGPVL VDITKDAQNAVAEFVWPDAPNLPGYRPTTRPHAKQIKEAIKLIEQSARPVFYVGGGVIRA EASPQLKELAEATRIPVATTLMARGAFPDSHPLHVGMPGMHGSVSAVTAFQKSDLLIAVG ARFDDRVTGNLESFAPNAKVIHIDIDPAEIGKNRAVDVPIVGDAAEVLAQLTAELTASKS AALDNDRGAWWSQLNTWKSTYPLGFEPNDQGLCDPQYVIERISALTGPEGTYVAGVGQHQ MWASQFVTFDRPNSWLNSGGLGTMGYSVPAAMGAKVGQPERTVWAIDGDGCFQMTNQELA TCALNNIPIKVAVINNSSLGMVRQWQTLFYDGRYSHSDLNTGHESVRIPDFVKLSEAYGC LGLRVDRNEDVDAAIATALETNDRPVVIDFTVPADAMVWPMVPAGVSNDQIQYARDMQPD FDDPMEEL >gi|294972715|gb|ADNU01000007.1| GENE 41 44410 - 45549 726 379 aa, chain + ## HITS:1 COG:ybjF KEGG:ns NR:ns ## COG: ybjF COG2265 # Protein_GI_number: 16128827 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 4 371 24 375 375 293 43.0 4e-79 MSTRVESQQAEVAELLAPFWATGETETPEQTWLPPVVGPESGFRIKVKMVVAGTTEHPTL GILDDDGAGIDLTDCPLYPESIHTVIRTLPWLIKRAQVPPYNVRKRKGQLKHVIVTAGDD NRVMVRFVLASQSALPRIQEHLPAFMDACEGVEVFSVSANINPVHTAIIEGDEEIALHGP QWLPVTQGRVQLKVRPQSFVQTNTVVASGLYEQVREWVSKAQAPATSHGRDLRVWDLFCG VGGFALHVAGPGRQVTGVEVAPAAVESAREVAGENDLGLNFICADAAQWSRQQTQVPDVL IVNPPRRGMGEDMAGWVEQSGIPHVIYSSCNPRTLAADLAKMPGYRIEQARFLDMFPHTS HAEVVVRLARQAGGSTDAE >gi|294972715|gb|ADNU01000007.1| GENE 42 45568 - 46173 519 201 aa, chain + ## HITS:1 COG:all1011 KEGG:ns NR:ns ## COG: all1011 COG0110 # Protein_GI_number: 17228506 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Nostoc sp. PCC 7120 # 2 190 10 189 192 148 41.0 5e-36 MSELDKMLAGEMYDSSDPELAALRVKARKLARKYNLTDEDEPEAQREILEELLPSASVIP ALQAPIYFDYGCNTVFGQLCEVNFNFTCLDVCPVSIGDNAFIGPNVTIATPMHPLVPSER NARKRADGSSYTLEYAKPVTIERDCWIAANVVICGGVTIGEGCVIGAGSVVTRDIPAYSF AAGNPCKVIRAIPVHGKTSPE >gi|294972715|gb|ADNU01000007.1| GENE 43 46227 - 46892 506 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394402|ref|ZP_06804626.1| ## NR: gi|295394402|ref|ZP_06804626.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 221 1 221 221 441 100.0 1e-122 MRLTKIQARLEESQTNGTLVQITREGVEMWPLVGVVAGFDKWVLVATVNRQLQAQGFDAV RLRDITRVDPPLTEPLIQRVAEKTGKELVRQPAHTLELGSTKALARTVIDAKAFVGLFTY SHGTGHEIDAYSGRIGEIRNRIVAFDRISANGSWDPSPLSLPMAEIARFGFDSVRQRTFQ LFGKDYPGGPHQPMDTSATLPQYDDVQAEGKNDDFLGSLLR >gi|294972715|gb|ADNU01000007.1| GENE 44 46993 - 48480 1571 495 aa, chain - ## HITS:1 COG:BS_yhjB KEGG:ns NR:ns ## COG: BS_yhjB COG0591 # Protein_GI_number: 16078109 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Bacillus subtilis # 7 469 5 478 489 171 27.0 5e-42 MIQHIPFIITAAYLVIAVVIGFRAGRGYDMNTTEAWGAGSRSMGPIVVYLLVAAGGVSAY TFMGSPGWAHDKGVPALYVVVYLSYMAILAWYFGPKVWELGRRYGHITQASAIADRYEST FLGGLSGFVGSIGGLAYAVLQTIGSAYILNVMSFGLIPVWAGVLVTLAVISIYLYRSGLR AIGFTNAFQGALMFVVAWLVGMWAVNHFTGGFSARPIFERLQAEAPEFLTLPGALGDMGY AFWTSSILISFFSIWQSHWISWMGAKSGVGLKKAVTYLPLYYLVLIPMIFVGFIGIFEYP DIAKSDQVAITMAVDNMPVVLAGLLGAGTLAASMSSSEPNIHATALTYSKDILQPMFKLS DKTAGKLSRWLIFPIMGLIIAPISIAEPASLVYILLIGYGFIAQLFPLLAGIFFWPRATK VGAIAGLSAGFVVTVVFSFFIVHPFGIHAGIWGLGVNVLFLVVGSLLTKPASEATLKRFY DLTPEKPVAGETGTL >gi|294972715|gb|ADNU01000007.1| GENE 45 48477 - 48701 310 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394404|ref|ZP_06804628.1| ## NR: gi|295394404|ref|ZP_06804628.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 74 1 74 74 106 100.0 7e-22 MKMGIRWPDSARKWVCFGLVVGVIVIGVWPVIPLFNSDTIIFGMPVLMVWSVAIVILTTA VMAVCNLIMKGEKE >gi|294972715|gb|ADNU01000007.1| GENE 46 48698 - 49732 761 344 aa, chain - ## HITS:1 COG:all4722 KEGG:ns NR:ns ## COG: all4722 COG0523 # Protein_GI_number: 17232214 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Nostoc sp. PCC 7120 # 5 161 16 174 353 95 33.0 1e-19 MTHTPLQTARLIVLGGYLGAGKTTLLNALLRDGRLGRTAVVVNDFGSVNIDADLIEAVDD DVMQLTNGCICCQISTDMIDTMAVLARMNRFDTVLCEVSGVGQPERMRRWGDFPGFHSGP VVIVANVTAIPRLVWDQYVSDVVTQQLGTADIVVLSGGTVAPGAVRRQAAEVSAKFASKA PVLEWTVGETLPDWFIQALVNEEAAASASERAEGSLAVTVAEHNVAHATVTVRLPTVTSA AHFADTLTSLAPALARAKGHVRDTAGNLHSVQLANRQVTHTEVPGNTSAGEGYTEFVLIA AEPGAMAALRRAVETIAQSLNVTVESLGASFSAQPETTKSKETL >gi|294972715|gb|ADNU01000007.1| GENE 47 49729 - 51396 1354 555 aa, chain - ## HITS:1 COG:MT0578 KEGG:ns NR:ns ## COG: MT0578 COG1574 # Protein_GI_number: 15839950 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Mycobacterium tuberculosis CDC1551 # 12 543 50 568 572 183 30.0 1e-45 MTFTTVYPARMVRTMDPACPTAEAVAVRDGLVRAVGTVQELMEYPDAQLDDRYSDAVILP GFVEAHGHAGTGTVWDSVYVGYLDRTDPDGKFWPGCTTVDDIVNRLREALRDHDPNRPLT AWGLDPIFFPDTPITAAELDRASAHTPICISHTSGHAYAVNTIALKKCGVDASTTVEGVM KDSSGNPTGELHEFAAMGLVASLTEGGGVLSVSPRAIKQYAQNGVNVGATTLTDLGSQRL MDDGVAIYTDTVDEDFPVRLNVFHFGAGVGPVSHSLPEAAARIVELREQSTDRLQFGNIK LMLDGTLQGLTARVLEPGYYRTDENGMWNVTPQEYLEAFETFHKAGLLIHVHCNGDQATQ LFIDTLQTVLERHPRPDHRHTVTHSQMTRPAQYRRLKALGACANVFANHIWAWGDQHLDV TVGPDRARRNNASATALRIGVPISIHSDTPVTPLGPLSTAKHAVTRLTQSGRVMGEHERI SVQEALEAITIGAAYMLKIDDKVGSIEGGKFADFAILDEDPLEVEPERLPDIYVRGTVVG GKHYTSLIAPPATRS >gi|294972715|gb|ADNU01000007.1| GENE 48 51598 - 53304 1784 568 aa, chain - ## HITS:1 COG:MT0199 KEGG:ns NR:ns ## COG: MT0199 COG0129 # Protein_GI_number: 15839568 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Mycobacterium tuberculosis CDC1551 # 9 566 16 573 575 808 76.0 0 MSASDNKVDIKPRSRDVTDGLERAAARGMLRAVGMGDDDWDKPQIGVASSWNEITPCNLS LERLAGFAKEGVHAGGGYPLEFGTISVSDGISMGHEGMHYSLVSREIIADSVETVFGAER LDGSVLLAGCDKSIPGMLMAAARLGLSSVFLYNGSIMPGTAKLSDGTEKEVTLIDAFEAV GACRAGKMTEADVDAIERAVCPGEGACGGMYTANTMASAAEALGLSLPGSAAPPAIHRNR NVFARQSGEAVVELLRKGITTRDILTREAFENAISVVMAFGGSTNAVLHLLAIAHEAGVE LTLDDFNRIGDKVPHLGNVKPFGEYVMNDVFKIGGVPVVMKALLDAGLLHGDALTVTGKT VAENLESINPPDPDGKILRALNNPIHATGGLAVLKGSLAPEGAVVKSAGFDAEVFEGTAR VFDQEQPAMDAVLNGELKAGDVIVIRYEGPKGGPGMREMLAITGAIKGAGIGKDVLLITD GRFSGGSTGLCIGHVAPEAVDGGPIALVEDGDTIRVDIAARTIELDVSEEELAERKKSWV IPENPRLHGVLGKYAKLVQSASTGAVTC >gi|294972715|gb|ADNU01000007.1| GENE 49 53377 - 54330 830 317 aa, chain - ## HITS:1 COG:VNG1437G KEGG:ns NR:ns ## COG: VNG1437G COG0111 # Protein_GI_number: 15790444 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Halobacterium sp. NRC-1 # 97 316 11 234 234 134 38.0 2e-31 MSTLDIRTIAFPDPDILAKVDGRITDHQQTGIEFVVWSAENPTVEVNRAAIDAIILPYID AQPTVARLGELPNLKLVQTQTTGYDLVADLVGTDTTVATASGVHAAATAELAVGLALASL RGIDTAVRSMASRSWNHARMRSLADRRVMILGAGGIGEAIRQRLVPFEAHITRVASHART DEHGRIYGPEDLPKLLPHTEVLIAVTPLTKQTEKLIDAEFLSQLPDNALVVNVGRGKVVD TDALVAELRAGRLSAALDVVDPEPLPHEHPLWGTPNTLITPHVGGDTSAFEPRIEQMLTE QVRRIIAGEPLINVVEG >gi|294972715|gb|ADNU01000007.1| GENE 50 54368 - 55021 552 217 aa, chain - ## HITS:1 COG:no KEGG:KRH_16370 NR:ns ## KEGG: KRH_16370 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 6 199 8 218 235 86 36.0 8e-16 MRFIVVAVLFTLSYSTWTVLLAIDPQLDVLHSFVSEYAVWGRPGAVLIRVGDAVAGVLLV VLGVFLRRRHALSLMLCAGLVVAGAATVGDTLLSYECAPSLSEECAAAEVAGTVGLAHQL HSVTSALVGFGFATAVIADIVMLVRSGRSFASLPVVLNVALLVLLGVSGVLALVPHVGWT GAVQRLSLVLICAWVIVLSVRHARMRGGALNVQHVDA >gi|294972715|gb|ADNU01000007.1| GENE 51 55117 - 55746 627 209 aa, chain - ## HITS:1 COG:Cgl2509 KEGG:ns NR:ns ## COG: Cgl2509 COG1045 # Protein_GI_number: 19553759 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Corynebacterium glutamicum # 25 193 2 168 182 198 64.0 7e-51 MAGVGAAVVAATSATTVGKRARAALREDLDTARRRDPAVRSDFVTAVSYPGLHAVWAYRG LHELNKMPGGEVPARILSQAVRTLTGVEIHPAAKIGRRFFIDHADGIVVGATAEIGDDVM LYQQVTLGGTSMEQTKRHPTLGNNVLVGAGAKILGPITIGDGASVGANAVVVKDVPANHV AVGVPAKNRAPKGTDTPQNHVLEDPAIWI >gi|294972715|gb|ADNU01000007.1| GENE 52 55770 - 56702 756 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 304 1 304 308 295 52 4e-79 MNIYANVSEVVGRTPLVKLQKASEETGAEIVGKLEFHNPANSVKDRIGVAMIDAAEKSGE LREGGTIVEATSGNTGIALAMVGASRGYRVVLTMPESMSKERRALLRAFGAELVLTPKAD GMKGAVAKAEEIGSQDNAVLVRQFENEANAQVHRDTTAQEILNDTDGEVDIFVAGIGTGG TITGVGEVLKEKNKDVQIVAVEPAASPLLSEGKAGPHAIQGIGANFIPGVLNRDIIDEVV TVENEVALETARETAKAEGLLVGISSGAAINAAKRVAARPENKGKRVVVIIPSFGERYLS TPLFAEYMDA >gi|294972715|gb|ADNU01000007.1| GENE 53 56878 - 57459 523 193 aa, chain + ## HITS:1 COG:MT0444 KEGG:ns NR:ns ## COG: MT0444 COG0242 # Protein_GI_number: 15839816 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 191 1 197 197 199 53.0 3e-51 MAIHPIVVYGEPVLHRKADPVTEFGDELHTLVADMYETLTASNGVGLAAPQIGVGKQIYV YDADDEVAGVRRRGVFINPVLVASKVPTTNPDPSEDTEGCLSVPVLDYPLKRADKVTVTG VDENNQPVSLSVEGWFARIMQHEFDHLHGTLYVDRLDTRWAKRWKKEQKKHGYNVPGNSW LPGTDPDPFGHGQ >gi|294972715|gb|ADNU01000007.1| GENE 54 57490 - 58527 855 345 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394413|ref|ZP_06804637.1| ## NR: gi|295394413|ref|ZP_06804637.1| lipoate synthase [Brevibacterium mcbrellneri ATCC 49030] lipoate synthase [Brevibacterium mcbrellneri ATCC 49030] # 1 345 1 345 345 630 100.0 1e-179 MVHWRELWKQECRGHVPRYRVLVPGSVPESVIDVWKARGYDLTSSDLAQQVFPQRYSRNL IRSKLVFATTTGAGAATTGFFGSTALIALAFADTVAIATTSAFTGIAALATAGVGIFTGS RFLRDPKRLTGKQLKQAPHVRWIAPFDLGYIPGANGRDTDEQRLFHLAVTVSQAIVGTRA WTHPALEGHVSRVDLDFAVASIGERLRELYELRQKLESIRQPHLDARIDVYQRNLAKAFA SLARRVESMHGYLEQLRKLSVQLVQLDSTEQSRELGEQVLDVLSRTVNDDTAQKQFSDLN LEAESHADAIRGMLGELEESVEEFDNFDDLDRKLAQAEREGKANN >gi|294972715|gb|ADNU01000007.1| GENE 55 58646 - 59215 625 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394414|ref|ZP_06804638.1| ## NR: gi|295394414|ref|ZP_06804638.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 189 1 189 189 329 100.0 8e-89 MESDMLKKDLTRSLTHGALAIAIGGGSLLAATGAAQAATPADNTSGTSTQAQAAGEGISR DEIIKRAEDRMAKAPYYSQGQDYFEDYRRDCSGFVSYAWNSGGPGEASFTFVQNGVAHNI GWEELQPGDAVTGPNHIVLVKAVNPDGSFELLEHGGGQSGKEAPNTRHATKDELISQGVG EPIRYNGVG >gi|294972715|gb|ADNU01000007.1| GENE 56 59541 - 64316 4485 1591 aa, chain - ## HITS:1 COG:no KEGG:cur_0492 NR:ns ## KEGG: cur_0492 # Name: surB # Def: putative cell surface protein precursor # Organism: C.urealyticum # Pathway: not_defined # 1 1587 1 1626 1628 1494 61.0 0 MHSSKTPTQRRRFLRVPIAALSALALTAGAFAVPNLMSGDSAAAATFSGGIRDKSGAVEK DDQRASDLPAGSCEVKGGSPSGSQAGFTWTTLEPDQHSTDKTKWGVSVALDNSKDRTFAD WGFSNSGLLGGVLNTGTISSMDVGQTLLGAGGPVTAKADEKIKITSARNQRNLNLNSELT GEKVKQFADADASNPVRYAWQGKYTKDNVDGPKATRGDNVGFSATVNPWPSENDNCSPIS VVWENKEKLVVKPGEELKVGTISADAASMPRMVIEAYDAQGKFIGTSNTEASGGEARLRV ENSGDIYFTMPEYKGTELNAQQGVRFSVLALPRSVEQLQSVVDANSYEGKAFEESNALPR YSKANVIGNHQWSLDDTQFHDPKYDKTEAKIISGVESRTGPIATEPQKVTFKQVPDLIKN LAKKKGEGGFEAKVELDEAYVYEGWTVEMDDDYNVTVTAPENPRPGTFARPRITVEYSNG STDILDLLVVVDPNNTQVTDLVKPNIAQGKPNQDIESQIKAKAIMKGHKAVAPAKYEVDE STVPSGWTVTVDKNGKVTAKADDSVPLGTVISPKVKATYPDHTTDEVEVQFQVINEIKVP TYGTEVKKPGEKASLKPTLPEKGLSGKESDEAPNRYTFEDGTTTFSKDGWTVTIDENTGE LTTTVPKGAQPGDQLDIPVLAHYESGAKPQKATGTVFVIKGDEVPVYSVESTGPGKPVDH QVEDAPKGSKFSFGLDGDKPILEQDVDGWKYKVDPNTGVVTATPPQDAKPGDQKTVSVTV TAPDGSKPKVPVTTVVNLTNNYEAEPSYPTETVYPGDTAKLPVTLEKPDNVNVAKENPYK VDNVPAGWTVTVDDEGTITATAPADAKAGDEVKIPVTVTYEDGSKDTATAVVKVVDVPKR EVPFKVEYKYDDSIPAGEYRTETKGEPGEEKQQKDGTWKRTKEPVNEVVVIGTKPAESAK EVTWTVPIPFPTEVRENPDLAPGETRVVQEGENGEKKFTAKFTAKGDKAEVVEEETTKEP VKRIVEYGPGLAPSELVTKTEKPVPFDTKVEFDPNLPAGEKVVDQKGELGTEVETSTQKL VDGKPSGDPTVTTERIKEPTTEKIRVGTKTEGTHTTSYEKDVPFETEIIFDENLEAGKQE TVQEGKLGKDKVTTTQTIVNSKVTDTKTETERVTDPVKKIVKVGTKGKTTSKTVEWTENT PFEVEVRLSPELKAGETKVIQEGKPGEVKHTLTVTSDNGEISTKEDTEELSKPTTHIIEV GTAPTLTELTDKHTEKIPFETIIAEDPNLEAGKIVEDQAGAFGEKEITKTWKLKDGKAEG EPETSEKVVKEPQQRKLRVGTKCDCETPTPEPSEDPSDEPTDEPTADPTEDPTADPTEKP TVKPSETPSEEPTTEPSENPSEEPTTEPSETPTEEPTQDPTDEPSEQPSEEPTTEPSENP SEEPTPDPTEDPTTEPTTEPSETPTEEPSDNPSEEPSDEPTQEPSDKPSEAPTDEPSDKP SEQPSEEPSDEPGKPGDSPSDEPNDPGEPGQPGDDSDGPGTPGDSSKPGDSGKTGPLPRT GVEVAMAVAMGLGLIGAGIALTAASRRNRRS >gi|294972715|gb|ADNU01000007.1| GENE 57 64587 - 66065 1738 492 aa, chain - ## HITS:1 COG:Cgl1230 KEGG:ns NR:ns ## COG: Cgl1230 COG0064 # Protein_GI_number: 19552480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Corynebacterium glutamicum # 1 491 9 500 501 558 58.0 1e-159 MKYEDAIKKYDPVLGIEVHVELGTVTKMFDAAPNTFGGGPNENTTPVSLGLPGALPVVNE TGVEYAIKIGLALGCQIAETCRFARKNYFYPDLAKNFQTSQYDEPIAFDGALEVELEDGQ LVTVDIERAHMEEDAGKNTHVGGSSGRIQGADYSLVDYNRAGVPLVEIVTRPITGTGERA PEVAAAYVRTLRDIFKALGVSEARMEQGNVRADINVSLRESPDAPLGTRTETKNVNSFRS IERAVKFEIARQATILEAGEKVLQETRHFHEDTGETSSGRVKSDADDYRYFPEPDLVPVS PAREWVEQLREELPELPAAKRRRLIGEWGFSDLEMRDVVNAGLLEAIEDTVAAGATPGNA RKWWMGEIARQAKASEAHATELVTPEQVAELADLVKQGKLNDKLARKVLEGVIAGEGNPA AVMEARGLEIVEDDGALEAAVDQAIADNPDVVEKIKGGKMQAIGALMGPIMKATRGQADA GKAREMIMAKIQ >gi|294972715|gb|ADNU01000007.1| GENE 58 66075 - 67577 1705 500 aa, chain - ## HITS:1 COG:Cgl1218 KEGG:ns NR:ns ## COG: Cgl1218 COG0154 # Protein_GI_number: 19552468 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Corynebacterium glutamicum # 3 483 13 494 497 486 59.0 1e-137 MTDLTRKTATELAQSLRAGDFTSTEVTRAHLDRIESVEPTINAFITTTADAALATAADVD RKRAAGEDLHPYAGVPIALKDLVVTQGIRTTAASKMLENWVPPYDATVYQKVQEAGLPLL GKTNLDEFAMGATTEHSAFGNTTNPWDTTRSPGGSSGGAAASVAAFEAPLSVGTDTGGSI RQPAAFNGLVGVKPTYGSVSRYGIIAMASSLDQVGPLARTVEDAAALHQILAGHDRHDST SLTDEVPDFTAAAHAGAQEGLKGKKLGVIRQLQGEGWDVGVIARFNEALELAQKAGAEIV EVDIPSIGYAVEAYYLIMPSEVSSNLARYDGMRYGLRVEPSEGPVTAETVMAATRAAGFG KEVKRRILLGTYALSAGYYDAYYGSAQKVRTLVQRDFAAAFDKVDVLVSPTSPTTALPFG VEDDADPMALYMGDIATIPANLAGIPGMSLPSGLSDGLPTGLQLLAPAREDARLYTVGGA FEAELNGHLGGPILDQIPQL >gi|294972715|gb|ADNU01000007.1| GENE 59 67581 - 67886 356 101 aa, chain - ## HITS:1 COG:MT3092 KEGG:ns NR:ns ## COG: MT3092 COG0721 # Protein_GI_number: 15842570 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Mycobacterium tuberculosis CDC1551 # 5 101 2 98 99 63 39.0 7e-11 MTEKSAITLEQVEHLANLARISMSQEELEQVSSDLGQILSSVAKVSEVATDDIPATSHPI PLTNVMRPDTVADQLTAEQALSGAPAEEDNKFLVPQILGED >gi|294972715|gb|ADNU01000007.1| GENE 60 67934 - 68776 501 280 aa, chain - ## HITS:1 COG:AGpA25 KEGG:ns NR:ns ## COG: AGpA25 COG0084 # Protein_GI_number: 16119250 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 222 1 196 256 107 33.0 2e-23 MTTLLDTHYHYDFLPPQSRSAFLEELAQAGVEIVAQTLTPSDFVALEAEEKRRVGTSSSA GPRPSSHASPRLSVGFHPWNIGPDYQRELDFFAQALTRTRFVGEVGLDYVPRRLQQVPAE TQAEVFRRILDIVSSQRADGPYVLSIHAVRSASQVCDALEATDTSGMVPIFHRFGGTSDE LTRLIKQGCYISVNPAMLATKRGRTYVTQVPADRLLLETDLPAGKEAGGDPGKSHARELI ETLNATVSTLAALRHQDPDELASHIMHTAQHLYGARPAGS >gi|294972715|gb|ADNU01000007.1| GENE 61 68773 - 69552 801 259 aa, chain - ## HITS:1 COG:CAC0908 KEGG:ns NR:ns ## COG: CAC0908 COG1179 # Protein_GI_number: 15894195 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Clostridium acetobutylicum # 1 235 1 249 251 182 37.0 4e-46 MTHQRFARLKLILGDEGLEKLAGSTVMVTGLGGVGSSCAEALARGGVGTLILIDRDVIEE SNINRQALAFVSTVGKVKAQVMEAMVADINPDCTTYARNVSLSRENLGEVFAELPRPDYV IDCIDDVTGKIEIAQWCAENRVHLVSSMGGGNKLDPSYLKFAKVNKTQYCPLAKVIRQVC IRRRIRGLEVLYSSEVPVNIEDKGSGTKAETVGTMSYFPPIMGQMLAGKVIRRLVGFEET PLAPRIGGPADDSQPPTES >gi|294972715|gb|ADNU01000007.1| GENE 62 69661 - 71286 1069 541 aa, chain + ## HITS:1 COG:Cgl1962 KEGG:ns NR:ns ## COG: Cgl1962 COG0768 # Protein_GI_number: 19553212 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Corynebacterium glutamicum # 106 536 110 598 622 99 23.0 2e-20 MNRRQFRIALALGLCVGVALALVVPLFVNTPRAAVNNAIEDLMSGTVTHEWANRSPGDSL ESAGLVEGLNVTPRIEFDSTRRDGDVAHAQLLWTWDFAQPVTPWKYHTRITVKRVGLKWK PVAEDSLVAPGLNLGDRVRVRSLVAARGAIRGAGGVALMQETRVVNVGVEPRRVTDVTKL AAELRSILDLELKDLEKRVESAPEDQYLHVSALRQEDYNRLEKTLRPIPGVVFRKGRQPI TVEANFATETLGTVGPATAEDIEKLSGTREGDTVGKSGIQRAYNSKLGGTRGFAVERIPA DAGEFDPPHELATIQSEPGSDVSTTLDVRTQKVAQDVLSSSGSPASLVAIRPSDGHVLAV ANHDPAGAVPNRALYGQYAPGATFTCVTEYALAKDGVLDSHTLADSAKALGFTSSLHGLD AAKGKIPLIDSPAARQEASRGQGEVLASPLNTATVAASIAAGHTVSPVLVTEDAPNESAT PLDSQAVKDVRNTMREAFTDDTASQWFTGYDGDLAISVFVEDSNATSAVTIAKDFFAQVA K >gi|294972715|gb|ADNU01000007.1| GENE 63 71291 - 73513 2006 740 aa, chain - ## HITS:1 COG:MT3094 KEGG:ns NR:ns ## COG: MT3094 COG0272 # Protein_GI_number: 15842572 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Mycobacterium tuberculosis CDC1551 # 29 738 8 676 679 702 55.0 0 MTQTDISRVLSADPAELEPAERQKLAAELAAQIEEHREAYYVHDAPKISDKEFDELVHAL EDLESAYPELARDDSPTQKVGGYADTEAFAPVQHVARMYSLEDVFSVEELDQWFERVAKS VPAGTPFLSEVKIDGLACNLLYENGQLVRAATRGDGYTGEDITANVRTIDDIPTTLNATN PPARVEIRGEVFFPSDKFADLNASLVEQGKPPFANPRNAAAGSLRQKDPSITAQRPLHML VHGIAAWQSGDAGAQEPTQQSQVYDLLRDWGMPISPYYRVCTTQDDVHAYITEFGERRHE LLHEIDGIVVKVDNIALQEELGYTSRAPRWACAYKYPPEEVTTKLLDIRVQVGRTGRVTP FAVMEPVLVAGSTVSRATLHNAHEVKRKGVLIGDDVVIRKAGDVIPEVLGPVTANRDGSE RAFVMPTHCPDCGAELYEQKEGDKDLRCPNSETCPAQVANRLAYLASRAALDIELLGEEA SLALTQPLGEPPLKSEAGLFDLTVDDLGEVEIEREVKKNGVPTGEIERVKYFFTKEELYA SGEKKGQVKKPSQPRANTLAMLDEIEKAKGQPLWRVLVALSIRHVGPTAARDIAAHFRSM DAVRNATVEDLLEVEGVGETIAQSVVDWFAEEWHAHIVDSWAKAGVRMADEPAEESTQPQ TLEGLTIVATGSLDNFTRDGIKESIVGAGGKASSSVSKKTDYVVAGENAGSKLTKAQDLG VPVLNEEQFQQLLATGEAPA >gi|294972715|gb|ADNU01000007.1| GENE 64 73510 - 74568 630 352 aa, chain - ## HITS:1 COG:no KEGG:Krad_1311 NR:ns ## KEGG: Krad_1311 # Name: not_defined # Def: hypothetical protein # Organism: K.radiotolerans # Pathway: not_defined # 9 322 14 318 341 138 36.0 4e-31 MPHDTELLATGWGAWPGENPRQGASVAFSELAAGYPPVPYPSTPAVGGTRWACDLLGFAV TLCEGLPVDLTSYGWRLAKGAGRDESRARSRRARAIEAAEEYGAGFDGRMMFTVPGPWTL VRNLSTPDGNRVLGDSGARRDVIQSYAFGLAEYMSSLERALGQTPRIMVVERALDRILTG TVPTVSGYRSLPALPDQFVTAALGSFLKRAGTDPLLALPALSSVTIAGKRIPHLQLAREA GASGVVVPLPGTDPRKWETLAEAVDTGAEVWLSLPCSAGEKPDRVNRWVDTIREPWHRTG MSGASLAKLGIVAGYGFPTDIPPLLPQELTDTNARGGYALAARLSEALKEIE >gi|294972715|gb|ADNU01000007.1| GENE 65 74573 - 75736 1039 387 aa, chain - ## HITS:1 COG:Cgl1211 KEGG:ns NR:ns ## COG: Cgl1211 COG0482 # Protein_GI_number: 19552461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Corynebacterium glutamicum # 1 380 1 360 365 385 56.0 1e-107 MKILAAMSGGVDSAVAAARAVDAGHEVVGVHLALSRMPGTMRTGSRGCCTIEDSRDAHRV AGMLGIPFYVWDFSERFKEDIVDDFIAEYSQGRTPNPCMRCNERIKFAALLDRALALGFD AVATGHYAEIVYDQDGHPELHRGVDMNKDQSYVLGVLTEDQLRHCYFPIGASASKADVRA EAADRGFPVANKPDSYDICFIPDGDTKAWLADKIPMRPGLIKDQEGNALGEHDGAMTFTI GQRKGLALERPAADGKPRYVVDIDARNNTVTVGGREALSVDRLEGIRATWCGQPAQNMGD SEDTALDCEVQIRAHAEPVSARVWLGDVVTQAPESEYNVPTPRPAGQTLHVAVKEPLSGV APGQTMVIYEGTRVLGQATIDRANRVA >gi|294972715|gb|ADNU01000007.1| GENE 66 75733 - 77001 908 422 aa, chain - ## HITS:1 COG:ML1708 KEGG:ns NR:ns ## COG: ML1708 COG1104 # Protein_GI_number: 15827914 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Mycobacterium leprae # 4 385 17 393 410 323 46.0 4e-88 MRIYLDYAATCPIQPQVLDAYVEELQQVGNPSALHASGQLARMRLEAAREQLAQCVGAQS AEVVFTSGGTEADNLALKGLFWQANKAHLTTGAPHERPVVMVSAIEHSAILETAEWLETQ GATIVTLPVDEQGVVRVDAARELLETHGPRTAVVSVMWANNEIGVLQPVPEITKLAHAHG ALMHTDAVQALGNVDLNFSEAGVDAMTVTAHKLGGPVGIGALILKRGVNAVPVLHGGGQE RSVRSGTLDVPGAVAFATAARLATEDRDEKVRIARLRDRLIAGIEERIPDAQLTGPRGDG RLPGNAHFVFPGCEGDTLLFGLDMAGFDTATGSACSAGVNRPSHVLLALGRSEDNARSSQ RFTLGPGTTEEHIDALLKVLPQVVENARKAGMVSATPAWMSAGEGSSAASSAHTDTEGTE TS >gi|294972715|gb|ADNU01000007.1| GENE 67 77036 - 77386 333 116 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394426|ref|ZP_06804650.1| ## NR: gi|295394426|ref|ZP_06804650.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 116 1 116 116 158 100.0 1e-37 MLFIYTVFQYAVCAVIFVWSLVTALRNRHASPPLVLTTAGLLLLLIVQLIMGVVMWSTQT GTDPILFFGYVLTAIAVVLASGYWAFAELSKWGPMVLVVSSFTAFIMVFRMDQIWQ >gi|294972715|gb|ADNU01000007.1| GENE 68 77398 - 77859 516 153 aa, chain + ## HITS:1 COG:no KEGG:AAur_1567 NR:ns ## KEGG: AAur_1567 # Name: not_defined # Def: putative integral membrane protein # Organism: A.aurescens # Pathway: not_defined # 25 143 26 144 150 132 61.0 3e-30 MGGGAGAGAKDSSAKAAQNPYSAMHSGPGRVLTAVYGIFALSATARAGYQFYRDFEHAPL AYSLSLFAAVVYVVATVCLVIGNRVTHHIAVVAVSVELVGVLSVGLLTVLDPELFPAATV WSTFGIGYGFVPLVLPFVGLFWLLRVGRRARAA >gi|294972715|gb|ADNU01000007.1| GENE 69 77930 - 79663 1319 577 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394428|ref|ZP_06804652.1| ## NR: gi|295394428|ref|ZP_06804652.1| hypothetical protein HMPREF0183_0150 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0150 [Brevibacterium mcbrellneri ATCC 49030] # 1 577 1 577 577 1099 100.0 0 MIRLVLSGLSALVGVLSLILAISALSVVGFDDVTQTKPHKVGDGTYAVVFDQQSIPFTKT TATISADSEKPIMLGVANGVDSSSFLTGVKHEEITEVKFPRDITTRSVAGEETPAKTAQS RDWWIDTTEGTHVSRSFDVDGDPQTVVIAPTGENPNLNGTTIHISVEMKGVLAFCLMGIA LSIIAFAGAFALFMWWRNDQPRVKRKANVKGEAEVADKDADPQTALPKGDSVEKSARTTF QAGLAQKVRSVAINRRARGVSAFAVVTAVTLSGCGLPVAQPKQPEIEKYTRPGIRQGEAS KFLKDYSDQLDEALKGDHKKLDQIQTGPLLQRTRAEVAIAEKTDGKLSSPRFSSVLVASP NFEKYPMWFVAFGAVDKKDAGSQALLVTRESATEEWTVTQALFVPDDQVPGFEVDEGGSA ERAPGGFATKLGDTSDVVAKYLSDGKKEHLDGANISTEGKAFSDFRDYVDSYSEGDNAFD KVSTECKPYEDVDLSAYTLATTDGSIGFGEIRCTLTLEVPAEYAVTLPKAVEAVKTSEEK GSRVIIETSVPFMMHESDGVKAVGTGWFMLESRTEKN >gi|294972715|gb|ADNU01000007.1| GENE 70 79663 - 80637 894 324 aa, chain - ## HITS:1 COG:SMc03801 KEGG:ns NR:ns ## COG: SMc03801 COG3118 # Protein_GI_number: 15966937 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Sinorhizobium meliloti # 21 324 1 329 330 130 31.0 4e-30 MSNEGVFDPRQQQAQPQGLDLSAVRTPAPGAGASAQSAQQQSVAQPHVQQQDPNGVNVPA LVFDVDEQSFEAVVQLSTQVPVVIDLWAEWCGPCKQLSPVIEKVTRDYDGRLVLAKIDVD TNPRIQQAFGVQSIPTVVALVKGQPVPLFQGATPEPQIKQVFDQLLTAAAQAGVNKRAIT GDAPQQPAGPKYPEAIEALEAGDLDRAAQVYQDALNETPGDEDAKSGLARVELLRRTRGK DLAEVRARAAQDPSDVDAALECADLDISGGHVDDAFARLITTLSKVTGDDKERVRKRILE LFEAVGPADPRVTQARGKLMRALF >gi|294972715|gb|ADNU01000007.1| GENE 71 80772 - 82421 1444 549 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_24580 NR:ns ## KEGG: Asphe3_24580 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 20 539 11 553 556 182 29.0 5e-44 MRYALAGVLIVMGLVAGFIGVAQKTIWAPSEQIVAHADLADPGSVVVIEPGVLNLYEGVA DLKVEHDGPISVARASKENVDAWVDSAAHTKVTGVKSETELRTEKVDGDEETPSVKDADL FTSVESGESELNMHWEEDPGRTAFVVSSDGKAQIDGKVSISWPNSASTPWAIPLMVIGVI LIILGIVLAFLARRNARREQERRNKRAERRRKLAQMGTAFVIVPGLALAGCASPELPEPQ PDEAPESPGGVVTDDQLNSILERISSTVSGADDKTDTKALEERATGPFLEQRKVAYGIKK KDKGFKLPPALATQSVKVNFTSATDTWPRVTSAVTYDEKTKQTQVLILSQESPRDNYKVW AQAVMLGGSEFPSVNDSRQGSELLPPDADGLAMTPSDAVNTYIDILKNGGKAKNAKNFED DPFRKQTADGQRKAAEALKDGNAKVTFDYARGDELVAQQVADGSAMVVASAVQKVTYSPE KVDGRTGQLTIDKPQSEIVGKKETDKDLTTEYRQVYVFIVPKGEGKARLIGLTSVLSGAK IGDGNDGGR >gi|294972715|gb|ADNU01000007.1| GENE 72 82553 - 83155 620 200 aa, chain + ## HITS:1 COG:ML0427 KEGG:ns NR:ns ## COG: ML0427 COG1949 # Protein_GI_number: 15827135 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Mycobacterium leprae # 4 179 3 179 215 186 51.0 2e-47 MAIDKIVWIDCEMTGLELEVDELIEVAAIVTDFDLNPVDEGVDVIIKPSQRARENMNDFV TNMHTTSGLIDKLDAGMSVDEAATIVLDYIKKHVPEAGKAPLGGNSVGTDKTFLQKQMPQ VVDHLHYRIIDVSTVKELAKRWLPKAYFHAPEKTGGHRALGDILDSIKELKYYRNVAFVD DVTSEVAIEASRAVADSKQI >gi|294972715|gb|ADNU01000007.1| GENE 73 83269 - 85032 1273 587 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394432|ref|ZP_06804656.1| ## NR: gi|295394432|ref|ZP_06804656.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 587 1 587 587 1182 100.0 0 MDNEIPLGKRRPLYRFFELLPALMSYGALILLIVLSAISPIAGSVYVLAVVGFMFIRGVR GAFDLVRGYNRYKRSARVDWGSRLTDIGLTLDGKRVPPSPPGSFNVHRHRELLDLIKSNP EDYIHPNDIVHAVIIAAYNESYEVIAPTVRGLQYTTTPGEQLAIFFAYEERGGEEIERTV NRLKNEYGHKFREFELIKHPRDLPDEIAGKGANITYAGYRVQEWADENGIDYSNVVVTTL DCDNKPYESYFDYVSYEYIADPERKRRSYQPIALYLSNIWDAPAITRVIASANCFFNLTT TVRPFALRNFASHSQSLDALVEMDFWSKRTIVEDGHQYWRSYFHFGGDYKVTAIHVPIFQ DAVLAGTLKQSIVAQFKQLARWSYGASDVPYAAQGIADKKAPFWPAAVRFFMLLEGHVTL ACVSIIIAFGGWVPVIALLQSGGSKTSFVANMPFVVGVIQQVAMISLLVSMLVFLSILTP RPVRYGRMRSFMMIGQWFLYPFTIMTFNASTALYSQGRLLFGKYREKFDVTEKSIVADAD SDFATAQMTSAGVHRRASLLARNEHESGRGSVAEQGATQGSEHSDKR >gi|294972715|gb|ADNU01000007.1| GENE 74 85111 - 85890 548 259 aa, chain - ## HITS:1 COG:BH1302 KEGG:ns NR:ns ## COG: BH1302 COG0726 # Protein_GI_number: 15613865 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus halodurans # 46 253 25 232 239 194 45.0 2e-49 MSRLFRLIYHPHFGVRSRALAKRVMALAAVLSLLAISVPVAMEKISTSRTYQLFGGLVNH VDTEKKLIALTFDDGPDEHTDQIVSMLDELDIRATFFVIGSAMEKYPEYGRTLVSHGHEL GNHTFNHRPMLGVSYTTVAKELSASDTLIRKAGYYGPVHFRPPYGKKGAILPMYLHAHER TTVMWSNHPEDFTRKKTQPTNEIVNYAIKHAKPGDIMILHPWYGRENIRSAIPHIVRELR SQGYEFVTVSELLAQKKKK >gi|294972715|gb|ADNU01000007.1| GENE 75 86065 - 86586 437 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394434|ref|ZP_06804658.1| ## NR: gi|295394434|ref|ZP_06804658.1| hypothetical protein HMPREF0183_0156 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0156 [Brevibacterium mcbrellneri ATCC 49030] # 37 173 1 137 137 277 100.0 2e-73 MSNHRNGVGANGSHHRNSSDGWGVVPENDRPLWSRYMLDYCPWFPGATIMTLISDGIING GTRAPQVWKETAQELHSAGFTPIRYFLLAELLSGARKKGELDQEAHGHLFKQWYQDPFPA FRLEAEAWKPWLERLEQAQPPIRALSHMLHGEKLSPMGMVVSYSGERMRIVSD Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:45:24 2011 Seq name: gi|294972614|gb|ADNU01000008.1| Brevibacterium mcbrellneri ATCC 49030 contig00008, whole genome shotgun sequence Length of sequence - 107951 bp Number of predicted genes - 99, with homology - 96 Number of transcription units - 46, operones - 26 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1322 728 ## ROP_10770 hypothetical protein 2 2 Op 1 . + CDS 1492 - 1992 300 ## COG0350 Methylated DNA-protein cysteine methyltransferase 3 2 Op 2 . + CDS 1989 - 2609 277 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) + Term 2625 - 2664 3.0 - Term 2613 - 2651 8.2 4 3 Op 1 41/0.000 - CDS 2669 - 3448 184 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 5 3 Op 2 38/0.000 - CDS 3474 - 4667 1373 ## COG0581 ABC-type phosphate transport system, permease component 6 3 Op 3 39/0.000 - CDS 4667 - 5644 990 ## COG0573 ABC-type phosphate transport system, permease component - Term 5708 - 5750 10.7 7 3 Op 4 . - CDS 5786 - 6925 1345 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 6959 - 7018 2.9 8 4 Op 1 . - CDS 7068 - 8042 638 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 9 4 Op 2 2/0.000 - CDS 8039 - 8956 584 ## COG0456 Acetyltransferases 10 4 Op 3 . - CDS 8969 - 9604 582 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 9718 - 9777 2.4 11 5 Op 1 . + CDS 9710 - 10603 706 ## gi|295394448|ref|ZP_06804671.1| ammonia permease 12 5 Op 2 . + CDS 10660 - 10776 153 ## 13 5 Op 3 . + CDS 10785 - 11387 588 ## KRH_05750 hypothetical protein 14 5 Op 4 . + CDS 11393 - 12109 712 ## gi|295394450|ref|ZP_06804673.1| conserved hypothetical protein 15 5 Op 5 . + CDS 12115 - 13149 730 ## COG0354 Predicted aminomethyltransferase related to GcvT 16 5 Op 6 . + CDS 13193 - 14557 1554 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Term 14576 - 14621 14.4 + Prom 14611 - 14670 3.6 17 6 Op 1 14/0.000 + CDS 14696 - 15523 212 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 18 6 Op 2 33/0.000 + CDS 15576 - 16550 948 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 19 6 Op 3 2/0.000 + CDS 16579 - 18687 1508 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 20 6 Op 4 . + CDS 18690 - 19580 673 ## COG2375 Siderophore-interacting protein - Term 19506 - 19543 -1.0 21 7 Op 1 . - CDS 19577 - 20569 919 ## COG0385 Predicted Na+-dependent transporter 22 7 Op 2 . - CDS 20643 - 23270 2449 ## COG0308 Aminopeptidase N - Prom 23327 - 23386 1.7 + Prom 23220 - 23279 2.7 23 8 Op 1 . + CDS 23362 - 24480 936 ## COG4129 Predicted membrane protein 24 8 Op 2 . + CDS 24498 - 24812 339 ## Intca_2937 hypothetical protein 25 8 Op 3 . + CDS 24837 - 26003 1044 ## COG0438 Glycosyltransferase 26 8 Op 4 . + CDS 26014 - 26526 485 ## Noca_4049 hypothetical protein 27 8 Op 5 . + CDS 26550 - 27293 763 ## COG0588 Phosphoglycerate mutase 1 + Term 27317 - 27361 15.2 - Term 27297 - 27356 6.4 28 9 Tu 1 . - CDS 27389 - 28054 675 ## COG0704 Phosphate uptake regulator + Prom 28059 - 28118 1.6 29 10 Op 1 40/0.000 + CDS 28222 - 29454 856 ## COG0642 Signal transduction histidine kinase 30 10 Op 2 . + CDS 29451 - 30131 690 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 30134 - 30199 19.3 - Term 30124 - 30181 4.6 31 11 Tu 1 . - CDS 30224 - 30805 622 ## gi|295394467|ref|ZP_06804690.1| hypothetical protein HMPREF0183_0188 - Prom 30851 - 30910 4.3 32 12 Op 1 5/0.000 + CDS 31039 - 31521 527 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD + Term 31538 - 31574 7.2 33 12 Op 2 19/0.000 + CDS 31598 - 32299 243 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 34 12 Op 3 . + CDS 32296 - 32778 480 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + Term 32876 - 32911 1.5 35 13 Op 1 20/0.000 + CDS 33186 - 34799 1368 ## COG2060 K+-transporting ATPase, A chain 36 13 Op 2 18/0.000 + CDS 34796 - 36871 1892 ## COG2216 High-affinity K+ transport system, ATPase chain B 37 13 Op 3 15/0.000 + CDS 36883 - 37470 506 ## COG2156 K+-transporting ATPase, c chain 38 13 Op 4 16/0.000 + CDS 37472 - 40027 1798 ## COG2205 Osmosensitive K+ channel histidine kinase 39 13 Op 5 . + CDS 40024 - 40707 575 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 40728 - 40792 27.0 - Term 40722 - 40772 22.2 40 14 Op 1 . - CDS 40794 - 42908 2219 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 42941 - 43000 3.8 41 14 Op 2 . - CDS 43056 - 44141 900 ## Ava_4088 hypothetical protein 42 14 Op 3 . - CDS 44190 - 45089 543 ## COG4759 Uncharacterized protein conserved in bacteria containing thioredoxin-like domain 43 14 Op 4 . - CDS 45109 - 46737 1605 ## COG1757 Na+/H+ antiporter 44 14 Op 5 3/0.000 - CDS 46788 - 47501 608 ## COG0491 Zn-dependent hydrolases, including glyoxylases 45 14 Op 6 . - CDS 47485 - 48588 955 ## COG1062 Zn-dependent alcohol dehydrogenases, class III - Prom 48621 - 48680 3.1 - Term 48630 - 48670 10.5 46 15 Op 1 . - CDS 48701 - 48808 143 ## 47 15 Op 2 . - CDS 48805 - 50376 1733 ## COG0733 Na+-dependent transporters of the SNF family - Prom 50452 - 50511 2.4 + Prom 50418 - 50477 3.0 48 16 Op 1 7/0.000 + CDS 50536 - 51987 1149 ## COG0215 Cysteinyl-tRNA synthetase 49 16 Op 2 . + CDS 51990 - 52910 506 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Term 52899 - 52947 11.4 50 17 Tu 1 . - CDS 52966 - 53757 747 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 51 18 Op 1 2/0.000 + CDS 53916 - 54893 660 ## COG1609 Transcriptional regulators 52 18 Op 2 . + CDS 54890 - 55873 588 ## COG1609 Transcriptional regulators 53 19 Tu 1 . - CDS 55918 - 58191 1621 ## COG0380 Trehalose-6-phosphate synthase - Prom 58216 - 58275 3.3 + Prom 58162 - 58221 2.5 54 20 Op 1 . + CDS 58253 - 60028 1137 ## COG0515 Serine/threonine protein kinase 55 20 Op 2 . + CDS 60113 - 60994 895 ## COG1651 Protein-disulfide isomerase + Term 61162 - 61218 9.1 + TRNA 61084 - 61157 79.6 # Thr TGT 0 0 + Prom 61086 - 61145 76.8 56 21 Op 1 . + CDS 61350 - 62390 970 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 57 21 Op 2 . + CDS 62441 - 63892 1576 ## COG2252 Permeases + Term 64041 - 64079 5.1 - Term 63642 - 63682 -0.2 58 22 Tu 1 . - CDS 63921 - 64748 555 ## COG2755 Lysophospholipase L1 and related esterases 59 23 Tu 1 . + CDS 65146 - 66627 1387 ## COG2966 Uncharacterized conserved protein 60 24 Tu 1 . - CDS 66554 - 67231 423 ## COG0692 Uracil DNA glycosylase + Prom 67277 - 67336 2.2 61 25 Tu 1 . + CDS 67362 - 68828 1460 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 68891 - 68923 5.4 62 26 Op 1 . + CDS 68974 - 69240 295 ## Sked_31630 hypothetical protein 63 26 Op 2 . + CDS 69244 - 69852 569 ## gi|295394499|ref|ZP_06804722.1| transcriptional regulator + Prom 69892 - 69951 1.9 64 27 Tu 1 . + CDS 70134 - 70337 332 ## COG1278 Cold shock proteins 65 28 Op 1 . + CDS 70532 - 72160 1563 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 66 28 Op 2 . + CDS 72179 - 72982 645 ## COG0730 Predicted permeases 67 29 Op 1 . + CDS 73094 - 73906 699 ## Kfla_1397 hypothetical protein 68 29 Op 2 . + CDS 73906 - 74121 277 ## COG2501 Uncharacterized conserved protein + Term 74240 - 74281 0.2 69 30 Op 1 . - CDS 74118 - 74696 595 ## Caci_1862 hypothetical protein 70 30 Op 2 . - CDS 74766 - 75677 769 ## COG0501 Zn-dependent protease with chaperone function 71 30 Op 3 . - CDS 75699 - 75968 416 ## gi|295394508|ref|ZP_06804731.1| F0F1-type ATP synthase, beta subunit 72 30 Op 4 . - CDS 75980 - 76756 968 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Term 76853 - 76889 2.0 73 31 Tu 1 . - CDS 76892 - 77182 265 ## Krad_3624 hypothetical protein - Prom 77223 - 77282 2.0 - Term 77292 - 77328 -0.9 74 32 Op 1 7/0.000 - CDS 77347 - 78786 1143 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 75 32 Op 2 40/0.000 - CDS 78783 - 80429 1486 ## COG0642 Signal transduction histidine kinase 76 32 Op 3 . - CDS 80522 - 81280 862 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 81300 - 81359 2.3 + Prom 81356 - 81415 3.4 77 33 Tu 1 . + CDS 81452 - 82534 1035 ## Asphe3_39160 permease, DMT superfamily + Term 82535 - 82572 1.2 78 34 Op 1 . - CDS 82547 - 84175 1570 ## COG1061 DNA or RNA helicases of superfamily II 79 34 Op 2 . - CDS 84172 - 86172 1432 ## Arth_0788 hypothetical protein 80 34 Op 3 . - CDS 86093 - 86308 96 ## + Prom 86241 - 86300 4.4 81 35 Op 1 . + CDS 86400 - 86654 281 ## gi|295394517|ref|ZP_06804740.1| hypothetical protein HMPREF0183_0238 82 35 Op 2 . + CDS 86710 - 87072 420 ## COG1278 Cold shock proteins 83 35 Op 3 . + CDS 87072 - 87932 501 ## Arch_1621 hypothetical protein 84 36 Op 1 . + CDS 88035 - 89288 1123 ## COG0477 Permeases of the major facilitator superfamily 85 36 Op 2 . + CDS 89332 - 89826 381 ## Arth_3993 hypothetical protein + Term 89828 - 89874 4.4 - Term 89815 - 89862 2.1 86 37 Tu 1 . - CDS 89871 - 91088 1080 ## COG1932 Phosphoserine aminotransferase 87 38 Op 1 . + CDS 91080 - 91733 469 ## COG0259 Pyridoxamine-phosphate oxidase 88 38 Op 2 . + CDS 91799 - 92527 621 ## COG1321 Mn-dependent transcriptional regulator + Term 92638 - 92670 2.0 89 39 Op 1 1/0.150 - CDS 92514 - 95609 1972 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 90 39 Op 2 11/0.000 - CDS 95609 - 97291 1400 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 91 39 Op 3 6/0.000 - CDS 97300 - 98502 1613 ## COG1960 Acyl-CoA dehydrogenases 92 39 Op 4 . - CDS 98506 - 99306 756 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 99376 - 99435 3.7 93 40 Tu 1 . + CDS 99405 - 100937 1469 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 100961 - 101004 14.7 - Term 100947 - 100992 15.1 94 41 Tu 1 . - CDS 101034 - 102458 1284 ## COG0477 Permeases of the major facilitator superfamily - Prom 102648 - 102707 5.4 + Prom 102734 - 102793 3.6 95 42 Tu 1 . + CDS 102900 - 103724 180 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 103758 - 103798 -0.2 + Prom 103840 - 103899 4.4 96 43 Tu 1 . + CDS 104016 - 104612 255 ## COG1403 Restriction endonuclease + Term 104637 - 104675 -0.9 + Prom 104726 - 104785 1.7 97 44 Tu 1 . + CDS 104814 - 105821 949 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 105830 - 105861 -0.1 + Prom 105831 - 105890 2.0 98 45 Tu 1 . + CDS 105923 - 107482 1134 ## COG0726 Predicted xylanase/chitin deacetylase + Prom 107546 - 107605 1.6 99 46 Tu 1 . + CDS 107627 - 107914 452 ## Bfae_24860 transglycosylase associated protein Predicted protein(s) >gi|294972614|gb|ADNU01000008.1| GENE 1 3 - 1322 728 439 aa, chain + ## HITS:1 COG:no KEGG:ROP_10770 NR:ns ## KEGG: ROP_10770 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 177 325 225 394 421 90 33.0 1e-16 RQAENVYELELCVSMPEKEEWLKAQAGITVTIPVLHFLTHLPPPRKDKRWGEGSGKDPGP DKHRPEKQYSGRYETEDRQSRRIHESRKHETEEQTFENQGSSRSPGYDERISGNQGTGVP SGAGGSPGSEETLNPEEFLNTAERVSVGESLGAGAPVGSGSGLDFGLPIKVDPDVRVPVM MNGRVPLDAKTADELIAQAKWVYRMFTDPETGVVLESTPTKYYIPAALKRMVEARHPDCS APWCATPARVCEKDHIEPFNHKDPENGGLTVMENLHPLCKRHHQEKTQKRLRVDKMDDGS LAWVFPRIGAMLVYPPESRINQLQYERLLEYFGTGDQDISHTINDYLATEHETAHSPEDV ATQESGHETVHGEAIWQCATEREYVQKASNMRSPAPGTAESPEPVHEYPREIADEYAIAA EVFHGDTRPWQPSEEPPPF >gi|294972614|gb|ADNU01000008.1| GENE 2 1492 - 1992 300 166 aa, chain + ## HITS:1 COG:Cgl2947 KEGG:ns NR:ns ## COG: Cgl2947 COG0350 # Protein_GI_number: 19554197 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Corynebacterium glutamicum # 10 166 1 157 158 136 46.0 2e-32 MQPKQPNYLVHHTTHSTPLGELTLVSRNGALVTVGLPGQHSTPPHPATTSKQDTDDPLND VARQLDEYFNGQRTTFNVNTDLSATTEFRRTVLEHLLTIPYGHTQTYAQVAQAIGRPRAV RAVGSACATNPIPIIIPCHRVLRSDGTLGGYAGGLEMKRALLELEQ >gi|294972614|gb|ADNU01000008.1| GENE 3 1989 - 2609 277 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 25 194 1 173 185 111 33 2e-23 MTDRTTPLSHTEATARGLVLGEDGLARPEWASHDPLLRNYYDHEWGVPVTDETGLFERLS LEAFQSGLSWATILKKRPAFREAFADFNPEAVANFDDTDRHRLLADTRIVRNRAKINATI NNAQATLQLRDSGGLATLVWSFQPDSWTPPKSVSEIPTTSPESHALAKALQKKGFKFVGP TTMFALMEAVGIVDTRVEGAHRPDNT >gi|294972614|gb|ADNU01000008.1| GENE 4 2669 - 3448 184 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 214 1 207 223 75 27 1e-12 MSKRIQAIDLDVYYGNFLAVEKVNIDIAPRSVTAFIGPSGCGKTTFLRTINRMHEVLPGA RAEGQILLDNEDIYGPGVDPVVVRTMVGMVFQRPNPFPTMSIRENVLAGYKLNGTRLSTK RANEIVERSLTGANLWNEVKDRLDRPGSGLSGGQQQRLCIARTIAVEPDVILMDEPCSAL DPISTLAVEDLINDLKEQYTVVIVTHNMQQAARVADKTAFFNIAGTGKPGHLIEYDDTSV IFSNPTHEETQNYISGRFG >gi|294972614|gb|ADNU01000008.1| GENE 5 3474 - 4667 1373 397 aa, chain - ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 85 394 23 307 307 205 41.0 1e-52 MSKNTETNTDTKAEATKTLARKGKQKNSLTAGQKPSWIWIAVLAGAVVVGFAWTFLVQHT FSIVGFTIITAIAYIIGMYVATFALENRRRAADGLWKNLVWATFIIALLPLISVIWTVVA NGLPSLVRNPAMLFQDMDGVTGATDQKTAQGGPLMGGFAHGLVGTLMITLLATIISVPVG LMTSIYLVEYGKGKLFSRAITFFVDVMTGIPSIVAGLFAFAVFQLFITTFIGTSPAKLQL VKMGFTAAIALSILMIPVVVRSTEEMLRVVPNELREASYALGVRKWRTIMKVVLPTSISG IASGVTLAIARVTGETAPILVTAGYIATTNWNVFNGWMTALPVYIYRQLVNPTAPAAPDP SIARAWAAALVLIVIVMLLNLVARIIAKAFAPKKTGR >gi|294972614|gb|ADNU01000008.1| GENE 6 4667 - 5644 990 325 aa, chain - ## HITS:1 COG:Cgl2520 KEGG:ns NR:ns ## COG: Cgl2520 COG0573 # Protein_GI_number: 19553770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 14 319 34 355 355 208 43.0 1e-53 MSHTTAEPQDKKAPSVAKAARGGAAGDKVFSGLALAAGAIILLVLAFVAIFLVVESLPAL WPKVFSNQDSIVSADNFFQYVWPLMAGTLIASAIALLIATPIAVGVALFISHYAPRQIAT PVGYVIDLLAAIPSVVYGAWGMTFLASSLVPAYAWLNKNLGWIPIFGGEASNTGRTILTS GIVLSVMILPIITSLCREIFVQTPKLHEEAALALGATRWEMIRMTVFPFARAGIISSIML GLGRALGETMAVTLVLSPGIFSLSLISSGHNATIPSEIALNFPEAFGMRQNELIAAGLML FIITLVVNMLARWIVSRHKEFSGAN >gi|294972614|gb|ADNU01000008.1| GENE 7 5786 - 6925 1345 379 aa, chain - ## HITS:1 COG:Cgl2521 KEGG:ns NR:ns ## COG: Cgl2521 COG0226 # Protein_GI_number: 19553771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 54 375 51 374 375 194 40.0 3e-49 MHVGNFPKQNRPKGILVKLKRFAPAAAILAAGALTLSACGGSSEGGDKGGENGGDKAVSG TLIGGGASSQEAAMTAWAEGVKADNPKLSVNYDPVGSGSGRKGFLGSQYSFAGSDAALKD EELEEAKKVCGDGGAFHVPAYISPIAVAYNLPGVDEVKLDAETIAKIFAGEIKKWNDDAI AKQNEGTELPDMDIVPVHRADDSGTTENFTAYLAEAAGDAWKPGEIETWPKELGGESAQQ TSGVVSLTQQKEGAITYADASQVGELGTVSVKVGEEYVPYSAEAAAKMVDASKPGEAGAI ELDRKSEEAGVYPIVLVSYHIYCKQYQDQETADLAKAFASYVVSEKGQKDAEAAAGNAPI SQTTRDAAMKEIDAITAQG >gi|294972614|gb|ADNU01000008.1| GENE 8 7068 - 8042 638 324 aa, chain - ## HITS:1 COG:Rv2985_1 KEGG:ns NR:ns ## COG: Rv2985_1 COG0494 # Protein_GI_number: 15610122 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis H37Rv # 19 147 17 148 150 101 45.0 2e-21 MSPTPVSNAGESARLNADILAAGAVLWRKAGGRLEVLLVHRPKYDDWAWPKGKVEKGETL PECAIREIEEETGYRVVLGLPLPSARYTVGKKLSKHVEYWAARVATEAPPRPSNPKEIDR AVWLPIEDARNKLTRFSDREQLDRLEQAHQTGSLYGFPVIIVRHGKAFPRSKWHETEQVR PLLGLGTRQSLALTGLLDAWEPKRLVSSPWKRCVATLKPYSASTGKNIKTIKWLSEKNNA NKPEKTVQALEKLIAKEQAVAVCTHRPVLPTVFRTLASFAPTGLAEKLPSEDPYMNPGEI LIAYFRPGPVPRIVEVERYRPIDT >gi|294972614|gb|ADNU01000008.1| GENE 9 8039 - 8956 584 305 aa, chain - ## HITS:1 COG:MT0841 KEGG:ns NR:ns ## COG: MT0841 COG0456 # Protein_GI_number: 15840232 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 12 300 17 309 315 144 36.0 3e-34 MSHTCQLNVDDNVRELLRHVTAHDHVAPLSDGVLDALAQGADSAPHEPISRGLVVDDQLA GFGAVVDQGERGALEMCVAPEFRGRGGGRLLAENLLERAREAGVASRTWAWSHGDHPAAS ALAESFGFARERVLLQLSTKTVDEGLTVPEVSTPEGVEIRTYQPGDEVRWREINNAAFSW HPEQGNQSAQDYARIVEDPSFDPASVFFAVHNGDIVGFHHTKIHTDHPSGLTMGEVYVIG VDPHVHSRGLGTVLMYAGMRHLLNSGVDAIELYVESDNDAALHVYKKLGFVNEIRHISYA PQDHT >gi|294972614|gb|ADNU01000008.1| GENE 10 8969 - 9604 582 211 aa, chain - ## HITS:1 COG:MT0840 KEGG:ns NR:ns ## COG: MT0840 COG0745 # Protein_GI_number: 15840231 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 7 196 51 230 268 140 41.0 2e-33 MSDLIALDPSSFDITVVDATTELQIAPIISTRLETAGFNGPTIVVLTDGGFTAAQESWNV TDIVSTNAQPAEVEARLRLAHVREATPSALDETDPVVATSATEPITRYGRLTVNHESFTV TVGGRNINLTYREFELLYHLVTHPNRAFTRAQLVTHVWGDAYLGGTRTVDVHVRRLRAKL GPEFAHTISTVRNVGYMFSSDEPTAQRPEVD >gi|294972614|gb|ADNU01000008.1| GENE 11 9710 - 10603 706 297 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394448|ref|ZP_06804671.1| ## NR: gi|295394448|ref|ZP_06804671.1| ammonia permease [Brevibacterium mcbrellneri ATCC 49030] ammonia permease [Brevibacterium mcbrellneri ATCC 49030] # 30 297 1 268 268 430 100.0 1e-119 MWLVKSICVHSGCDSPVAIRAPGHGNMGRMERWISVLVALGLGVTLAVTSSLGYGPIAFA SGLLVFAFAFGWPRLTDSPQPWATSFTLGGFGFAGMLATWMAVAPPYLEWLPVLAGLGLL WSFVQHLARGIEASHAVANVSAQVAGIVITLSACTWIASLRLPGNHSAIYIGLAAIFLAQ CATALPWPARYTSPLAVIAGVVGAGIAHVFHPLPTVSIVAALVFGMVLGGIVAATDRILG LIARARFQATSLNEARGVTKARTWGVQLALGAAPIALSGVAVYALHRLPAWAFIWFG >gi|294972614|gb|ADNU01000008.1| GENE 12 10660 - 10776 153 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDNFVVLETVFTVLVALAGLGTLGIAAKVIANLFKSRR >gi|294972614|gb|ADNU01000008.1| GENE 13 10785 - 11387 588 200 aa, chain + ## HITS:1 COG:no KEGG:KRH_05750 NR:ns ## KEGG: KRH_05750 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 1 199 1 198 206 219 52.0 5e-56 MPVEIPTDLKPELVPLAWLIGSWEGVGVVGYGDTPDTQFGQRIDFVAPTSAPYLLYTAQS WLLGEDGKIADTLSVETGIWQLVRERDNADVGPGLIPPSEESKYTSAEAVDTLRNSDGDF DLEVSLVHPHGLTELYAGRINGPRIDLSTDMVARTRTSKDYKASTRMYGLVEGDLLWAWD MAANGHELASHASARLKKVT >gi|294972614|gb|ADNU01000008.1| GENE 14 11393 - 12109 712 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394450|ref|ZP_06804673.1| ## NR: gi|295394450|ref|ZP_06804673.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 238 1 238 238 451 100.0 1e-125 MTAQTKVYQPQKKSGPQKKSGLRGFAFVIVVILLATIAFVVLLTARVNAVTRHAGAASEA GNAFIEALSNDPQNAQGHLDKARDELGQAKSNLHSIPLEQMQMIPWVKRNVDASDTLITH MENVLNEAGPVMISLSGVVDFSSGSLKSNPDLSSLNPSMWDDAQDAAKVIKEAREAIHGI DTAGLLPDVHNAVKDAREILDEVYRKIAPLESIAEDVKKYLPPGIAKRLEELGNLLGG >gi|294972614|gb|ADNU01000008.1| GENE 15 12115 - 13149 730 344 aa, chain + ## HITS:1 COG:ML2203 KEGG:ns NR:ns ## COG: ML2203 COG0354 # Protein_GI_number: 15828181 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Mycobacterium leprae # 8 310 17 335 373 127 33.0 5e-29 MSAVYGTGYRSSEIAHLGSPLREQRALADLKAVADLSSMSILTLTGPDSLTWLNSLTTQK LDVAQPGTSTETLVLSPTGHIEHWAYVYVADDCVWLLIDGDGKPLQEFLESMKFMMRVDI RDVSDEYTVVGSNGEVENLEPVIQWIDPWPNITPGGTSYVAVKDHPGSAFDFRLNVCRDR EGLNIVGRDAWEALRIEAWRPAVADCDHKTLVGEIDVLRTGVHLAKGCYRGQEAVARVHN LGQVPRRLVFLHLDGSEHAVVSPGDPILGPARGAERQVGAVTSAAIHYELGPIALGLVKR TVDPEAELAVLSDDGNTRVSATQELIVGTQKETVTVQRNPQLRR >gi|294972614|gb|ADNU01000008.1| GENE 16 13193 - 14557 1554 454 aa, chain + ## HITS:1 COG:ML0485 KEGG:ns NR:ns ## COG: ML0485 COG0160 # Protein_GI_number: 15827162 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Mycobacterium leprae # 1 445 1 439 446 503 57.0 1e-142 MTSLEKGGPALPQERKIVTEIPGPKSKEIEARRTKAVAQGVASGYPAYIVAAGGGILKDI DGNQIIDLAAGIAVTNVGNANENVVKRVTEQVEAFTHTCFMVNPYENYVELAEKLNQLTP GSFDKRTVLLNSGAEAVENAVKIARTYTKRNAVVVFDHAYHGRTNLTMAMTAKVAPYKHG FGPFAGEVYRAPMSYPFRDNDAAGTKLSGEDAAKRVITMIEKQVGADQVAAIVIEPIQGE GGFIVPAEGFLPTLVDYARENGIVFVADEVQAGFGRTGKMFASEWEGIEPDLVTTAKGIA GGLPLSAVTGRAEIMDAVGAGGLGGTYGGNPSAVAAALGAIESYENEGLLERASALGDIM RSRMEALQSKFPEVADVRGRGAMQACELVQRDSIEPNPNLAKAVAKHCADNAVLVLVTGT FGNVLRFLPPLTMSDELLNEAFDVLEEAFEKALS >gi|294972614|gb|ADNU01000008.1| GENE 17 14696 - 15523 212 275 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 236 264 507 563 86 32 6e-16 MKTLNKTRASGLTAVGICAGYSNDMVVHGVDLRLNAGEVTALVGPNGSGKSTLLRTLSGL LPASSGHVRFDDGATVGGLSRKQLARRLTMLTQMRATPHGMRVRSAVALGRHPFTGLWGK GDAVGAQKIQEAMRLADVEDLADTPLEQLSGGQLQRVWLASCLAQDTEVLLLDEPTNHLD LKYQVELLELLFDLAHKHGVCVGVVLHDLNHAAAIADTVAVLSKGHVVGIGAPHDVLRSD LLSDVYGTEITCEHDSDGVRVTTRSPRIRASRSTD >gi|294972614|gb|ADNU01000008.1| GENE 18 15576 - 16550 948 324 aa, chain + ## HITS:1 COG:VC0202 KEGG:ns NR:ns ## COG: VC0202 COG0614 # Protein_GI_number: 15640232 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Vibrio cholerae # 36 322 36 312 319 118 29.0 1e-26 MGLRKMLAIAVVGLLSLSGCGTKYEAQDTKADKGGSSVSITDSRGKTVTLDGPAEKVVTL EWSVTEYAVALGVNPVGVADPKGYAEWDTAVPLQNDPKDVGIRTEPSVDAIAALEPDLIL ADKSSIPDKQMATIEKIAPVAVFNSATTDGLIDLLKENQKKVGTLTGKDAEAEKLAEDYD ATVEECKRKIADANKEGTPVVYTYPTKTANTIDFRMHGPGSGPGVVAKDVGLSHAWSDSG DKDYGISNSDVEGLTSLTEDDHVFYYAEKGGEDPIAALNSNGIWKGLGFVKNNRVHKISD SVWLYGGTKSLEQMAKLYVDTVTG >gi|294972614|gb|ADNU01000008.1| GENE 19 16579 - 18687 1508 702 aa, chain + ## HITS:1 COG:BH1038 KEGG:ns NR:ns ## COG: BH1038 COG0609 # Protein_GI_number: 15613601 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus halodurans # 46 695 14 646 649 264 33.0 4e-70 MTHSLKATRTRNDVPTDSHEARRWTRTLPSSATLLVAVLGLVLILSVIHLTQGTSNVTPG AVLQWATGRGSDFDTTVILNSRLPRLLAGIVVGVALGGAGALMQLLTRNALASPDTLAVN AGAYLSLTVVAVSGVTLSFVSGTAVAFIGGLIAAGVVVALSRGSSPVRLVLAGSVIAMGL SALTTVFLLFYSFETQSLVAWGSGSLGQIGMGGVLQLAVVVGAVLVAVFLTGHKLDVMHL GDDAASSLGVNVAVWRTTFVVLSVLLAASAVTVAGPIAFVGLCAPALTRIAARWVAELSH ARSMFLMSMVVGVILVVGSDVILRAVIPGSDSVSIPTGIVTSIIGAIFLIVLAQGVKSGF DSDSLVTMKNGTKLGFDRPRVIIGASAIVLALCVGGAILVGDTVLFTGDVVNYLNNIAPP QVEIVLESRIPRVFVACLAGACLALAGVVLQGTTRNPLADPGVLGVSGGAGLGAVFALTV LHKSDFATLIVWAGLSALVVGLLLFGLAGRGGFDQARMVVTGIGIATATQALTTCLIVVS DPWNRTMAMTWLSGSTSGVTLAQVLPMVVCLVLGSAACMYVVRDLDVIQIDDSTPRILGV NVVQHRVILILIALILVTVTTVTIGVIAFVGLVAPHVARLIVGARHAVLLPLASLIGAVL VVCADALGRTIVAPGQIPAGLATAIIGCPYFLWLLVRMRKES >gi|294972614|gb|ADNU01000008.1| GENE 20 18690 - 19580 673 296 aa, chain + ## HITS:1 COG:PA2033 KEGG:ns NR:ns ## COG: PA2033 COG2375 # Protein_GI_number: 15597229 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Pseudomonas aeruginosa # 4 293 5 298 302 144 33.0 2e-34 MPQSYTPFLVHLTARTQVSENLVRLTFAGPKLDQFGTTCLDQRIKLVLGSRECVEELVER DDWLAWARSLPEDVRPCLRTYTVKAVRPMSKELDVDFVVHGTEGPASAFAVEAPIGAHIA VVGPVEDAPGSSSEGVAWAPGSASQVLIAGDETAVPAISNIVESLDPEMRGAVFLEVPSS GDIQGFTAPHGVTVNWLPRESHTGTTRGDLLYRAVQEWCDQNGIASSEKQVDPDDTYDSS VLLWDEARRGNTDALYTWVAADADTVARLRHEMRKKRGLPKDSSSFMGYWRMGVSL >gi|294972614|gb|ADNU01000008.1| GENE 21 19577 - 20569 919 330 aa, chain - ## HITS:1 COG:Cgl1229 KEGG:ns NR:ns ## COG: Cgl1229 COG0385 # Protein_GI_number: 19552479 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Corynebacterium glutamicum # 10 308 13 311 335 263 54.0 3e-70 MSTSSMNPQEQRSARVAVTIFPAMVVAAGVFGFLMPEVVTPMAPSVTWLLGGVMFFMGLT LTVPDFTQIAKKPWIAFVGVVAQYLFMPLAGWLVAVLLGLPPELAAGVILVGCAPGGTAS NVVTYLARGDVALSVSVTTLSTLIAPLATPALTLMFAGQYMDVSFSTMMMSIVKTVLVPV IAGVVIRVLADKFIQKISPVLPWLSALTIALIVAIVVGGSADKLVAAGATVLLAVVLHNS IGLALGFATGLAVGLSAAQRRALTFEVGLQNSGLAATLATTYISPLAALPGAVFSVWHNV SGAILAAIFARQPIDNAPREKETAETVSEA >gi|294972614|gb|ADNU01000008.1| GENE 22 20643 - 23270 2449 875 aa, chain - ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 4 873 5 859 861 596 41.0 1e-170 MTTNLKRSEAATRSELLTTHSYTVHLDITSAPDLNQKTFTSTSTVVFDAHHEAETFIDFI ADSVSDITINGQSLDPADNFDGARVTFPVTAGSNTLTVTGQAVYSTSGEGMHRFVDPADD KIYLYTQYEPTDARRVFANFDQPDLKATFTFSVTAPHDFLVLNNTAPTESQTSTPEAATT SADTATTSAVTHEFATTERMSTYITCVCAGHYVGAHDTYTRGDLTISMSVYVRASLAESM DADNIFTVTKQGLDFYHDNFEFPYPWGKYDQIFVPEYNLGAMENPGLVTFVDSFIYRDAV TRTEYESRANVILHEMAHMWFGDLVTMKWWDDLWLKESFADYMASLALTTATEFTDGWVT FALRRKDWAYRQDQYPTTHPIVADIPDVEAARLNFDGITYAKGASVLKQLVAFVGLDAFM AGSRDYFAKHAFGNTTLMDFLDALEARTEGRDVRAWADAWLTTTGVSEISVDVETDDAGI ITAATVSQNNTGPHVDRPHTFTLAGFNLQRGAMHPAGTWKIDFDAASAPLPKLVGTQRPD LLLPGHGDDDFAKMRLDETSTSHALHSVTKLQDSLDRAVVWSALTNAMRDGSLSVSSFVD AYARSLGRERHAGINAGLRMQALTAIKLWTTDVEGTLGTILGSALDAFETAEPGSDTQLN LAEIVLIFVAHSATAVVPGPEVVAARDFASRILASGPTFEGYGLKVDNALKWKALISLVV LGWADEEDIAAQESRDRTDSGVMQARTARAARSLPVAKMRAFEAVTTDTSLSNNSLSATI AGLTAPVSTPILEPFVDAFFEQLESFWTTRSNEIAKRLVLGLYPSWSTRREYVAQRTDAW LSEHGTAPAALRRLVTELGDDMHRAIRVQGAQASL >gi|294972614|gb|ADNU01000008.1| GENE 23 23362 - 24480 936 372 aa, chain + ## HITS:1 COG:Cgl2711 KEGG:ns NR:ns ## COG: Cgl2711 COG4129 # Protein_GI_number: 19553961 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 36 367 33 371 389 116 29.0 7e-26 MTQASKKKPLYRRLSSALGVRVRLGGRRALENSSQILQVVIGATSGYAFCHYVLGHPAPF LAAVAAVIGTGVTADKRLRRSIEIGLGATLGVLVGEILVHLFGIGIWQIAVVIFAGLVVG NILNSGALFVNQIAIQAVYVVAVPMSIATKPFDRTIDAIVGAVIAILMALIVPSDARKRP RNRAANLLYEISVLLKGTAKALRTADADLAERVLERARESQEFVDSWRSSISVSQEATRI NARSRRYAAEVTRLARACEYADRAMRLVRVIARRVVAMAATGVERPGVAHPIEQLGEGAA MLRIALRRGTSRVPAEMFLAEVARTLSPKADFVTDRHDETLVLLLRPLANDLMSAAGMTE DAANDVLPELDE >gi|294972614|gb|ADNU01000008.1| GENE 24 24498 - 24812 339 104 aa, chain + ## HITS:1 COG:no KEGG:Intca_2937 NR:ns ## KEGG: Intca_2937 # Name: not_defined # Def: hypothetical protein # Organism: I.calvum # Pathway: not_defined # 2 97 1 93 103 69 44.0 5e-11 MLEAFGNLQSFIFLLLNVAAFVFQLFAFIDSLRYSQEVYDAAGKRSRVFWSAILGVASAL AFVALPPMHFRVPFVTLLGIVAAGVYFADVRKALRAVDPRYRGR >gi|294972614|gb|ADNU01000008.1| GENE 25 24837 - 26003 1044 388 aa, chain + ## HITS:1 COG:Cgl0396 KEGG:ns NR:ns ## COG: Cgl0396 COG0438 # Protein_GI_number: 19551646 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 377 1 391 418 207 37.0 2e-53 MRVAILSLHTSPLAQPGQGDAGGLNVYVTNTARVLNDLGHQVTIFTADPAWAGPDSVTQD NIEVRHLRVNATGKDDLPQYMDELASRLVHIPEYRDADVVWAHYWISAKTALISNDIDSS RRPVVVSFHTIGAVKDRDTGTFLEPVERLEAEKQIARDAHMLVANTPLEAAAMRELLDPR ARIVAAQPGVNHQIFTPGETGEIDMSAPPATSYTLVCVGRMQYIKGTDVMMRALAELRKA EMNVRVEFLGGGSGGPDTQDFEHLATELGVADCVDITPPVPPHELVMWYRRADLVIVPSR SESFGFVAAEAAASGACVVASQVGGLPSVVIDGETGALCEPGDHVGLAHTITELLKDPAQ RERMGHAGVAHAQNFTWDTCVRNVLNQL >gi|294972614|gb|ADNU01000008.1| GENE 26 26014 - 26526 485 170 aa, chain + ## HITS:1 COG:no KEGG:Noca_4049 NR:ns ## KEGG: Noca_4049 # Name: not_defined # Def: hypothetical protein # Organism: Nocardioides_JS614 # Pathway: not_defined # 6 162 15 171 199 151 47.0 1e-35 MTALDILHTWATNSDVEIDVVNDHHAVVVLPGEKKLKTAVSVKESHHSLDCQAFIIRRPD ENHLTFATYLLRKNLELSMTAFAVDHLGDVYLRAAIPREAVTEDLIDRLMGEFLTVADSS FNELLVRGFITSMKKEWEWRVSRGESTRNLEAFRKILDPDAQKSDTRMSE >gi|294972614|gb|ADNU01000008.1| GENE 27 26550 - 27293 763 247 aa, chain + ## HITS:1 COG:Cgl0397 KEGG:ns NR:ns ## COG: Cgl0397 COG0588 # Protein_GI_number: 19551647 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Corynebacterium glutamicum # 5 246 6 246 248 325 69.0 3e-89 MTYNLVLLRHGQSEWNQKNLFTGWVDVPLTEQGRTEAARAGELLTEAGLLPDVLHTSRLR RAIVTANLALNAADRHWIDVKRSWRLNERHYGALQGKNKKEIRDEYGEEQFMTWRRSFDT PPPELDDASEWSQAGDARYANLGDSIPRTECLKDVIARLLPYWYDSVIPDLRDGKTVLAT AHGNSLRALVKHLDGISDEDIAGLNIPTGIPLHYELDEHFAPVKRGGTYLDPEAAKEAAA AVANQGK >gi|294972614|gb|ADNU01000008.1| GENE 28 27389 - 28054 675 221 aa, chain - ## HITS:1 COG:ML2188 KEGG:ns NR:ns ## COG: ML2188 COG0704 # Protein_GI_number: 15828170 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Mycobacterium leprae # 1 216 1 215 222 131 37.0 8e-31 MREVFTKELEALADGLVDLGKLAVEAIKQSNKALTTNDLQLAEQVITDDAQVNANQVEID RRAVEILALQAPVAADLRIVVAALKMSVALERMGDLARHISALVRIRYPEHAVPEAFERI FTRMGSVAERIGEGMVELLSTPGLAAVPMISALDEELDTLHLEVFTVIASLSADQITPSQ IADVTLLARYYERFGDQAVNVAQRVDYMLSGNLDSDASSAE >gi|294972614|gb|ADNU01000008.1| GENE 29 28222 - 29454 856 410 aa, chain + ## HITS:1 COG:ML2440 KEGG:ns NR:ns ## COG: ML2440 COG0642 # Protein_GI_number: 15828318 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 5 409 10 405 441 229 39.0 6e-60 MDVLIISLLTGVVGLGLGISGILAFRLSEKSRNSADLHSDEELPEGIAEVLAVLPSAAIV VDAGDDVVKASPAAYTYGLVRGHSLSSPELLEVVVRVRARGLIEEVNFKKERGGDRAFVR HLHARVAPLGSAYVLVLADDQTEAKRVHEVRRDFVANVSHELKTPVGALSLLAEAVTDCA DDPEAVARFGGRIQKESKRLTQLVQEIIDLSRVQDHEAPGATEDVSIAKVIEEAVDRAKT RAEAKNISIDMVPTGDWTVLGSHDLLVNAVRNLIDNAISYSNDGTKVGVGAKEDGGNVTI SVTDQGIGLSTEDTQRVFERFYRVDPARSRMTGGTGLGLSIVKHIVATHGGEVRVWSKLD QGSTFTIVLPLAHPEADLSQAQQEGILLSDSSGQPLTVAQAQQQTQKEKS >gi|294972614|gb|ADNU01000008.1| GENE 30 29451 - 30131 690 226 aa, chain + ## HITS:1 COG:Rv0491 KEGG:ns NR:ns ## COG: Rv0491 COG0745 # Protein_GI_number: 15607632 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis H37Rv # 1 226 1 227 227 313 73.0 1e-85 MTRILLVEDEESISDPLAYLLGKEGYDVTVAADGLQALAEFDSHGADLVLLDLMLPGASG TEVCRQLRAKSKVPIIMLTAKDSEIDKVVGLELGADDYVTKPYSSRELLARIRAVMRRNT ESSDIDDGVLEAGGVRIDVERHVASVRGSELALPLKEFELLEMLVRNAGRVMTRGQLIDR IWGQDYVGDTKTLDVHVKRLRAKIEETPSEPKLLVTVRGLGYKFEA >gi|294972614|gb|ADNU01000008.1| GENE 31 30224 - 30805 622 193 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394467|ref|ZP_06804690.1| ## NR: gi|295394467|ref|ZP_06804690.1| hypothetical protein HMPREF0183_0188 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0188 [Brevibacterium mcbrellneri ATCC 49030] # 1 193 3 195 195 320 99.0 3e-86 MKWLTRAAVAAAAIALVVPVSGCAALLSNQQTHNYVYHGGDGAWASLGGVDFRGILLIAN EDNTEAQLFYTIVNNSQGPATVTVKVGDYQKQIKLAKGEKIVQNPQSPGFDGEEALVKGL SAQVGEQVDVEVTANNMDKTVRAQLLNADHWYYEDAQPKGSSTSTPTESASETPTEGATE GEATPTPEETEGQ >gi|294972614|gb|ADNU01000008.1| GENE 32 31039 - 31521 527 160 aa, chain + ## HITS:1 COG:ML0320 KEGG:ns NR:ns ## COG: ML0320 COG1329 # Protein_GI_number: 15827084 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium leprae # 1 160 4 163 165 217 73.0 7e-57 MSFQVGDTVVYPHHGAATIQEIKTRTIKGEDKLYLKLQVSHGDLTIEVPAENCDLVGVRD VVGEEGLEKVFQVLRAEVTEEPTNWSRRYKANLEKFQSGDVIKVAEVVRDLWRREQDRGL STGEKRMLAKARQVLVSELALAEEKEETEAEEMLEKVLAS >gi|294972614|gb|ADNU01000008.1| GENE 33 31598 - 32299 243 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 5 233 6 229 234 98 33 2e-19 METVAIIPAAGSGTRLGLGTPKAFVPLEGQTLLERAVAGALDVGVHRVVIAVPRDLEART QDLFRAQPNVHTVVGGSERTESVRNALASIEGNPSYALVHDAARPLTPRRVFDRVLTALR AGHRNVVPVLPVSDTVRTLSSQQPEDVAGLSAPVERAWLRAVQTPQGFAFKDLADAHERF ERDATTNVTDDASLLEAMGIPAVGVEGSHEAFKITHPLDLELARMLCQRKENS >gi|294972614|gb|ADNU01000008.1| GENE 34 32296 - 32778 480 160 aa, chain + ## HITS:1 COG:MT3687 KEGG:ns NR:ns ## COG: MT3687 COG0245 # Protein_GI_number: 15843194 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 3 156 4 155 159 155 56.0 3e-38 MIVPQVGIGVDVHAVSDNPDRPMWLAGLLWEGVVGLEGHSDSDAVAHACCDAIFSAAGVG DLGAHFGTDRPEFAGASGCALLREAARIVRQAGFEIGNISVQAVCNRPKIGTRRDEAQRV LSEAAGATVHVSGTTTDRLGLTGRGEGVAAIATALVYRTQ >gi|294972614|gb|ADNU01000008.1| GENE 35 33186 - 34799 1368 537 aa, chain + ## HITS:1 COG:RSc3382 KEGG:ns NR:ns ## COG: RSc3382 COG2060 # Protein_GI_number: 17548099 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Ralstonia solanacearum # 2 535 12 588 590 473 49.0 1e-133 MVALLAVVHVPMGNYMAHTFTSAKHLKIERFIYRLAGVNSEAQHTWKMYLRNILVLSALS VLGMYILQRIQQWLPMNMGLGPVSADQAWNTATSFVTNTNWQSYGGETTMSHLTQMLAQN FQNFISAAVGIVVAIVLIRAIAYRETDKLGNFWVDLVRCCLRILLPIAFVGAVLLILGGA IQNFNGPQVIQTLAGGQQTIPGGPVASQEAIKELGTNGGGFFNANSAHPFENPNGWTNLL EVFLILLIPFALPRTYGVMVGDKRQGYTVLGAMAILAIGSLVSLTALQMSFANSNLAAME GKETRFGILGSTLFATATTLTSTGAVDSMHSSYEPLSGGLLIFNMLLGEISPGGVGSGLY GMLVVAIIGVFISGLMVGRSPEYMGKRIGPTEVKLISMYALVVPVVVLLGTGLAIALPST RDSLANFGPHGLSEVLYAFTSAGNNNGSAFAGLNANTPFLNVALGFAMLLGRFVPIALVL CLAGRLSVQAPVAKTKGTLPTDTPLFSVVMAGTALLITGLSFLPTLALGPLAERFMS >gi|294972614|gb|ADNU01000008.1| GENE 36 34796 - 36871 1892 691 aa, chain + ## HITS:1 COG:MT1059 KEGG:ns NR:ns ## COG: MT1059 COG2216 # Protein_GI_number: 15840460 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Mycobacterium tuberculosis CDC1551 # 26 688 33 706 709 740 65.0 0 MTTQIQETETETRDATSAQSGISGKLILASLPQALRKLNPATMVRTPVMFIVEVGAAITL VLGFIHPSLFTFTLAIWLFLTVVFANLAEAVAEGRGKAQADALRKTQTASTGRVRRPNGE VEEVPSSSLRPGDVVIVSAGETIPGDGDVIAGAATVDESAVTGESAPVIRESGGDRSAVT GGTRVLSDTIEVRITSEPGNTFIDRMIGLVEGASRQKTPNELALSAFLSVLTLIFVLVVL TLVPMANYSNAQQPITVLIALLVCLIPTTIGALLSAIGIAGMDRLIKRNVLATSGKAVEA AGDVTTLLLDKTGTITVGNRKATAFVAAEGISEIELARKAQLSSLADETPEGRSIVVLAQ DGLGLGEVPEADFAQAEFIPFSAETRMSGVKLSDNHQVVKGAATEMVKWVEQSGVKVGDD VKHAIERISNDGGTALVVAEEENEKRQVLGTIHLKDIIKEGMVERFKTLRSMGIRTVMIT GDNELTALAIAREAGVDDYLAQAKPEDKLALIRREQKGGNMVAMTGDGTNDAPALAQADV GVAMNTGTQAAKEAGNMVDLDSDPTKLIEIVEIGKQLLITRGALTTFSIANDIAKYFAIV PAMFVVAFPGLDVLNIMRLSSPESAITSAVIFNAIIIVLLIPLALRGVKYVPGTSHQLLR RNLVVYGLGGFVVPFIGIKIIDMIVSLLPGF >gi|294972614|gb|ADNU01000008.1| GENE 37 36883 - 37470 506 195 aa, chain + ## HITS:1 COG:MT1060 KEGG:ns NR:ns ## COG: MT1060 COG2156 # Protein_GI_number: 15840461 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Mycobacterium tuberculosis CDC1551 # 15 188 8 184 189 112 45.0 5e-25 MAQKTAGVVSATVQATRTLLVLLVILGLIYPGATWLVGRLNANGADGSFLEYNGQVVGSK LIGQDTSDDPSLFHPRLSSGDYDGMSSGGSNLSLVGDELQKTIEEAKKSIAAENNVDPAE VPADAVTASSSGLDPHISKEYAHIQIERVAKNSGLSVTEVEELVEKNSYGSILGFIGSPR VNVNTLNLDVVKAKG >gi|294972614|gb|ADNU01000008.1| GENE 38 37472 - 40027 1798 851 aa, chain + ## HITS:1 COG:MT1057 KEGG:ns NR:ns ## COG: MT1057 COG2205 # Protein_GI_number: 15840458 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 4 830 36 864 871 593 44.0 1e-169 MNGRRGSLKVFLGAAPGVGKTYAMLEEAHSLSKSGTDVVVGVVHTHGRAGTAAKVEGLEL IPTKKVLYRGSEYDELDVDAILERRPEVVLVDELAHTIVGAESSRKRWQDVERILNAGID VISTVNIQHVESLNDVVADITGHVQNETIPDAVLRDADDIELIDLSPDALRIRLRRGQIY KPAAADAALSRFFRKGNLTALRELALLWLADQVDEGLAKYRNEEGIHSTWPARERILVAV AGGPHVPTLIRRGMRIVGRMAGRELVVVHIVPTDGAPLMSDIDIQQARTLTESLGGTWHT LSGEDYAETLLEFANTINATQLVIGSSRTPWYKKLLLRPTSSRIIDGAGDIDVHIVTNHG AGEPQPPRRRPRRNLSVARTVSAWVLAGVCIAGITAMGISEAHEVVAFSTLSMAYVLVVV VVALVGGLWPALASAVVGTGLLNWFFTEPLHTMSIAEPENIFLLFVFIVVAALVARVVDG AARRTQEARTARANAQLMTELAGSVIREGVDIQAILDKIAQAFGQDSVTLGYFDDNKSLV TEYRSGKELTSANEADETFTLDDHHVLLLAGRPLNASEQRVLDAYTGRLVGLMTQTQLTE ARLQARQLEAANAIRTALLSAVSHDLRTPLATIKTSVSGLLLDDVDLPKDLQAELLRSIE ASSDRLDRIVADLLDMSRVQTNTLSINESVIGPNELVARTVDHMDPTLKPEPLEIAVPHD LPLVKTDASLVERILENLLSNAAKHTGNGVKIDAAREGDRVAIRVIDFGPGLSDEAKQQL FTPFTRLGDTTNSRGLGLGAAVAKGLAEGIGGELVADDTPGGGLTMVLSLPIGKVTHAPF VSDHMTTRSTL >gi|294972614|gb|ADNU01000008.1| GENE 39 40024 - 40707 575 227 aa, chain + ## HITS:1 COG:MT1056 KEGG:ns NR:ns ## COG: MT1056 COG0745 # Protein_GI_number: 15840457 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 222 3 224 226 227 50.0 1e-59 MILIVEDDPTLSRAMAVNLIARGYKVLTANTGEQALTLASDHPIEAILLDLGLPNMSGLD VIDGIRGWSQVPIIVVTARHETQSKIEALDRGADDYVTKPFALGELLARLRANLRRVPQE TAEPVVVTSDGRLSIDLARNIVAVSGEQVSLTPHEWKIVGYLARHPNRLVRREELLTHVW GKGYEKESNYARVYMSQIRQKLEVDSATPKYFITEPGMGYRFVQGDD >gi|294972614|gb|ADNU01000008.1| GENE 40 40794 - 42908 2219 704 aa, chain - ## HITS:1 COG:AGc2233 KEGG:ns NR:ns ## COG: AGc2233 COG0737 # Protein_GI_number: 15888546 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 33 629 42 654 662 303 33.0 8e-82 MRIRTLAAAVTACVITGSPVVALAQPAPENLDLSFLATTDVHGHIYDFDYFTNQPYPEKD SLGLTHVNSIVKKVRADRGADKVFVFDNGDSIQGSPLTSYYANQENILKTGKEHPMATAN NLIGYDAQVVGNHEFNYGLEFLKRYQSQVDFPLVGANVIDDATGEPMFDPYTIVEREIDG KTVKVGVVGVTPPGSAVWDKQHLDGKAHFDDIVSSAKKWAPKAKEAGADVVVALAHSGKD PEGSTWNPKNKTDDLATSVAREVPDIDIVIAGHSHQDEPEEYVKQVDGTQALVTQPKFWA RSVSEVGLSLVPDGEGGFEVDWSEDNKPKVTPHYSGEAPEDQELKDALKVPHEKTIKHVN KVVGQATETMSAKTSRYEDTAIVDFISHVQADTVRNALKDSEYKDLPVISQASPFSRTAE FKKGDVTIRDVAGLYVYDNTLSGVKINGKQLREYLEWSARYFKQVDEGADFNPEEVTNAR DDERGRDIPDYSYDAVTGVKYDINISKPVGERIENLRLEDGSELKDSDEFIMAINNYRAS GGSGYPVSDLPEVYNDQIAIREAIVDWTVKNKTIDPKDFFVESWWLTSSTRPVEDEPGEE KPGEEKPGDEKPGEEKPGEIKPSEDPTEGAPTDKPSEDAPSQKPGDDSDDSSGSNDSDGS DKEAGKDSSNPLPRTGAQIGVALGVGVALLAAGAVISVATRRKN >gi|294972614|gb|ADNU01000008.1| GENE 41 43056 - 44141 900 361 aa, chain - ## HITS:1 COG:no KEGG:Ava_4088 NR:ns ## KEGG: Ava_4088 # Name: not_defined # Def: hypothetical protein # Organism: A.variabilis # Pathway: not_defined # 25 319 21 323 388 175 35.0 3e-42 MGHSSFDQIEKTHLDQMAQATGTHLSVLMPVNRTDQQSRESSTRLKSLLGEAQQKLAEAG LSSSDIDARLETFTALINDGPFWRNQGDGLALYSADNVHFVFRVGVPLDERVHVGEQFAL RPLATALAESSKFYILALSRAKVRLFDATRDSITQLDLGDTVPSSLDDVVSPDERQRQLQ SRSVGGDRAMFHGHGAGDEVDAVFVDKFLKAVGQGVGDLLGKARSQPMVLAAVAEAHPAF KQFCTYPALQDAMVEGNPDSRSPKELHAAAWEALLPTFKAQDDATFERFSAKLGTGLAST QSDKIREAAVEGRVDTLFINPSVTRNADVVNEAILATLQNSGKLVIMSDGSVENTAALFR Y >gi|294972614|gb|ADNU01000008.1| GENE 42 44190 - 45089 543 299 aa, chain - ## HITS:1 COG:Cgl0602 KEGG:ns NR:ns ## COG: Cgl0602 COG4759 # Protein_GI_number: 19551852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein conserved in bacteria containing thioredoxin-like domain # Organism: Corynebacterium glutamicum # 4 276 5 261 287 168 36.0 1e-41 MTACSDFFDEPLLGTALEATRWVCVEFSHGWGHDALDGFALGEELAAQVKAHMNAHNARF QFIREPGRDGQDANGHRVFIAESTPGQEALYTLTINSVSDLLDLDISNPATLPGATAVES PLALICTHGKRDVCCALKGRPVAALLSQHVAGPQNADAPAETTSARVWETSHTGGHRFAP ALIVLPWGFTYGRAGVVAARQIWDLAVDGQVHLDLLRGRSAFSKPAQAGEVAVRSHYHLT GIADVVDVEATSDTVFHVKCANGNTHAVEVEHTVSDLPPRPATCGKGDKEVKEFRTTLL >gi|294972614|gb|ADNU01000008.1| GENE 43 45109 - 46737 1605 542 aa, chain - ## HITS:1 COG:VC1131 KEGG:ns NR:ns ## COG: VC1131 COG1757 # Protein_GI_number: 15641144 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Vibrio cholerae # 8 493 11 497 533 356 46.0 7e-98 MVDQYPILTILPPIIAIISAIVTRRVVLSLGLGVVLAALLVENFNPLGTLSQIWSAFAVI FWDSEAGRVNTDQVFNLIFLVILGVITALVLMAGGTEAFSDWAVKHIKSRRGAKLLAAFL GIAIFIDDYFNALAVGQVARPVSDRFKVSRAKLAYIIDSTAAPVSVLAPFSSWGASIIGL MAPIIAAAAVAPNGVMGFLGAAAANYYAVGAVVAVFLVIIFSLEAGPMRREERRALAEGE MFAKDAEIPGELSEDLPVYRPGALRSLIVPFVFLVVGVIGAMFITGYMESGSANPMDMLA STLVPNSLLYGGTAGLIAAVFYYFRYTSSHSKFNAGTLFKGVAEGTRSMLPAIYILILAW MLGTVVEALGTGEYLGGLVENAGIPTQWLVPLMFVVAAAMAFATGTSWGSFGLLIPLAGD ILLAVGATDMVIPALGAVLAGAVMGDHCSPISDTTILSSTGAGCEVVTHVQTQLPYALAT AAAALVGYIAVALTHQVWVGMLVTLVTLTGLILAGVWRWTRLEKIHGFELDDEPMATEAN KA >gi|294972614|gb|ADNU01000008.1| GENE 44 46788 - 47501 608 237 aa, chain - ## HITS:1 COG:Cgl0320 KEGG:ns NR:ns ## COG: Cgl0320 COG0491 # Protein_GI_number: 19551570 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Corynebacterium glutamicum # 4 237 7 211 211 207 46.0 9e-54 MTARIERLITSGTFSLDGGTWDVDNNVWIVGDDAEVVVVDPAHDPERVADQVGTRFCERI LLTHGHDDHIRYALETKDSLGGIPVCLNAEDSMLWDAVFPDVKPDENIQDGNTFSIAGLQ LKALHTPGHSPGSTCFYIESGLTLAQLPNDLGQAVDQLRNELGENASVPVLLSGDTLFSG GPGATGRSYSSFDTIIDSIRSTLFELPDSTVVLTGHGDATTIGAERPHLDEWIARGH >gi|294972614|gb|ADNU01000008.1| GENE 45 47485 - 48588 955 367 aa, chain - ## HITS:1 COG:MT2320 KEGG:ns NR:ns ## COG: MT2320 COG1062 # Protein_GI_number: 15841751 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Mycobacterium tuberculosis CDC1551 # 1 362 1 360 361 522 73.0 1e-148 MPTTVKGVVAKAKGKPVELVDIVIPDPGPGEVVVDVKSCGVCHTDFHYREGGIGDNYPYL LGHESAGVVSQVGEGVTNVEPGDFVILNWRAICGECRACKRGEPWYCFDTHNATQKMTLT DGTELEAALGIGSFADKTLVAAGQCTKVEETDPAVAGLLGCGVMAGLGAAINTGKVTRGQ SVAVIGCGGVGAAAVAGARLAGASRIIAIDFDDRKLQWATDLGATHTINSRDLGEDDVVT AVQELTGGFGADVVIDAVGVPETWRQAFYARDLAGTVVLVGVPTPEMELSVPLLDVFGRG GSLKSSWYGDCLPERDFPMFIDLFKQGRLPLDTFVSERITIDQVEDAFAKMGRGEVLRSV VINDSAN >gi|294972614|gb|ADNU01000008.1| GENE 46 48701 - 48808 143 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSTPAIIMMLLSMVTVWGGLGAAIVHLKKHSDVEN >gi|294972614|gb|ADNU01000008.1| GENE 47 48805 - 50376 1733 523 aa, chain - ## HITS:1 COG:PM0718 KEGG:ns NR:ns ## COG: PM0718 COG0733 # Protein_GI_number: 15602583 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 5 505 3 501 502 493 56.0 1e-139 MKQVTSSQPRQVFSTQTAFIMAAIGSAVGLGNIWRFPYVAFENGGGAFILPYLIALITVG IPFLFLDYSIGHKFRSSSPLNFRMLNRGTEPIGWIHVGIAFVISIYYAVIIGWAICYTFF SLNKSWGDNAEEFFGGTFLQQSGDVTFSVQPVVGVLLPLIAVWVATLLILVGGVENGIAR VSKIFLPILLVLFVALVIRALTLPGAVEGLNAFFTPNFSALSDPKVWIAAYGQIFFSLSV AFGIMITYSAYLKPRTNLTGSGLVVGFANSSFEILAGIGVFASLGFMAHQSGVAVSETVA GGPGLAFVAFPALISEMPGGSIFGVLFFLSLVFAGLTSLISLVQVVTAAVADKLGISQKT STIVFGGFMAVVSCIFYPTITGLSVLDVVDAFVNNLAIVGIALIALICLTWVIRALPTLR DHLNKVSSFKVGWTWIVFLGVITPVVLGYMFITSTYDLVKNGYGEYPGWFVGVFGWGMVA GLVVFAVIMSLVPWRKDVVDAARTDHDETQETIHAKDIQGENA >gi|294972614|gb|ADNU01000008.1| GENE 48 50536 - 51987 1149 483 aa, chain + ## HITS:1 COG:Rv3580c KEGG:ns NR:ns ## COG: Rv3580c COG0215 # Protein_GI_number: 15610716 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Mycobacterium tuberculosis H37Rv # 3 481 7 463 469 434 47.0 1e-121 MTIQLYNSKTRKLEPFAPVTPGCASIYVCGATVQGAPHIGHMRSAVVFDQLRRWMTYRNF DVTLVRNVTDIDDKILSKSVDEGRPWWAHAFLYEQVFTEAYDRIGVAPPTYEPRATGHIP EMIELIARLIEAGHAYPAQDGSGDVYFDTASWPEYGSLTRQDRGSMEDAADAPVRGKRDP RDFAVWKGRKDADPVTASWDTPWGRGRPGWHIECSAMSTKYLGAQFDIHGGGRDLRFPHH ENEMAQSNAAGDPFANLWMHSGLVSVDGNKMSKSLGNSIFAHDLFDEYSPLLVRFFLTSG HYRSQLEFTRDNVAQQQAAVTRITNFLTRARTELGDTAPAVVSFESGYEGGHVAPEFAEA MDDDLSTPRALAVVFDYVSKGYKLLEAGGSANREELAHTLVAVETMLDTLGINPTSLQWA ETASGSDSATQALDVLVSELANRRLEAKKAKDFANADAIRDQLTQAGIVIEDTADGFRYH LKD >gi|294972614|gb|ADNU01000008.1| GENE 49 51990 - 52910 506 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 65 304 9 246 255 199 43 5e-50 MSKSGSRARKGTGGHGRRALAGKGPTPKAEDRVYHKAYKAKQERLKRAAQQQARKKKKEH GSNMVAGRNSVLEALREGIPATTLYVARRIDADERVRDIIEAASDRGIPMLEAGKPDLDR ITDGAIHQGVALQVPPYEYAHPDDLLSLARDRAEHPLLVALDGITDPRNLGAIVRSTAAF GGHGVIITERRAASMTAAAWKTSAGAASRIPVAQVVNLARAIDDLKKSGVFVLGLDMNGD VELPKLELAREPVCLVVGSEGKGLSRLVRDKCDQIVSIPISASTESLNAGVAAGVALYEV ARTRML >gi|294972614|gb|ADNU01000008.1| GENE 50 52966 - 53757 747 263 aa, chain - ## HITS:1 COG:SSO1542 KEGG:ns NR:ns ## COG: SSO1542 COG1028 # Protein_GI_number: 15898367 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Sulfolobus solfataricus # 10 263 6 255 255 212 43.0 5e-55 MTDVPNIPNLFNMSDRTAVVVGSGSGLGQVSALGLADSGAHVVCADLNTEAAEATAQIIA ERGGSAEAFTVDITDSGSVDSLAQSFADAHALVITPGANVRKRLLDTTDEEFDRVIDINL KGTYRLMRAFGDSMRERRRGSIVTFASFRAEVVEPGQGLYAAAKAGVVQLTKTLASELGG SGVRVNTILPGPFDTPLTAQIKSDTEWWDAYANKTAVGRWGHLHEMAGPVLFLASDASSY VTGTPLLVDGGWMAHDGRFSPRV >gi|294972614|gb|ADNU01000008.1| GENE 51 53916 - 54893 660 325 aa, chain + ## HITS:1 COG:lin2102 KEGG:ns NR:ns ## COG: lin2102 COG1609 # Protein_GI_number: 16801168 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 322 1 332 336 80 23.0 3e-15 MTVRIHDVAQAAGVSVTTVSRVLSDRGSVAEATRQKVLTAAQKVGYSRSTFLPRNDVRFI AVATPQDPEHWQLEVSRLVNAELQSQGILTMTPLIDSNLTSLKTSIQAGAGLVVTPTFTR LDVDVPVVRFDESSFVSAQTSTNETIAAKLDLATGLSLAFEHLTDLGHRRIGLVCKDSGE LADLLASRFLAEHPMRNLGSVEDWIVRVSKSYSGGIHAAMRLKDAGGTAVIVQGQLQLFG VLDAIRKRGLTVPRDMSVVGIGDSLTTQYTGPPATVLALDSAAMAQALAAATRSVLHIPG EKMKTVPPNFRPKLIARGSTSAGRA >gi|294972614|gb|ADNU01000008.1| GENE 52 54890 - 55873 588 327 aa, chain + ## HITS:1 COG:lin2102 KEGG:ns NR:ns ## COG: lin2102 COG1609 # Protein_GI_number: 16801168 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 5 327 4 336 336 68 22.0 1e-11 MSRPTLKQIAELSGLSVATVSRVLRGKASVSESAVRAVETAVRTLGYGTAPGECSAIAVV QAVPVGSDVDPYESLFLHVSERLFEVGRAAVRVLTGPGIPSATPMLASSGIRGALVLGGS SAGPEAVRMQEEGFRVLRIAQSTYAETAQIVLDPTTSLDTALSHLVNLGHTRIGLAVPRN SAAAARISTFRKRLAELLHISATRDQAPVAMAEPGLPAGIHAAQKLLMANCTAVIATSPS LTFGLLEAARRERLSVPEHVSLLTVGDIHDADVLDPPISQVTYDWQAVAETAVGMLETML SRPGYMPSYSMSPELVLRSSEKPIRRR >gi|294972614|gb|ADNU01000008.1| GENE 53 55918 - 58191 1621 757 aa, chain - ## HITS:1 COG:Rv3490 KEGG:ns NR:ns ## COG: Rv3490 COG0380 # Protein_GI_number: 15610626 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Mycobacterium tuberculosis H37Rv # 22 485 21 494 500 457 54.0 1e-128 MERLAEGKYQSKRIDPPQSGPDFVVIANRLPVDRDTSVDPPAWRTSPGGLVTALDPVMSR THGAWVGWAGQPDEDLDPFDKDGIHIVPVTLTATEVRRYYEGFSNATLWPLFHDVIVPPE YHRTWWDAYRDVNERFAYRAAEVAAEGATVWVNDYQLLLVPLLLRAKRPDLKIGFFNHIP FPAWELFSQLPWRKEILTGVQGADLIGFQRPTDAANFRSAVRNLCGTSTRGERLTVPAQD DLGVPGHASIARHFPISVDTDSLQELAADPAIIERAAQIRRDLGNPDIVMLGVDRLDYTK GIRHRIKAFEELLRDKRLDPESVTLVQVATPSRERVEQYKQIRYDVELAVGRINGEFSDL NNQVVHYLHHSYPRDQMVALFLAADVCLVTALRDGMNLVAKEYVACRLDDTGALVLSEFT GAADQLTQALKVNPHDIDNMKNTIMRACELPPKEQRHRMRLMRKRLEKDTVHVWSRSFLD ALEDAATHHAHGLPQDLKTAIERLAQASRLTVALDFDGVLAPLVDDPYTSAPLPGSAAEV RALSVLKHTRVALVSGRNLDNLFNVYEPPAGTLMYGSHGSETAHVLPGKRGLEATQVNLT DNEEAILEELEDCVQEFETRFADSSAWIERKPLGRTFHWRTVKPEFRDEVLAYIQQAQTR FNHVRQVSGHDILELTVRHVTKGDAVNELTTSAPEILYVGDDVTDEDAFAALAQNPNAVT VKVGEGETRATYRVNSPADVTDLLFHLRVAREQHQAQ >gi|294972614|gb|ADNU01000008.1| GENE 54 58253 - 60028 1137 591 aa, chain + ## HITS:1 COG:SPy1625_1 KEGG:ns NR:ns ## COG: SPy1625_1 COG0515 # Protein_GI_number: 15675501 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pyogenes M1 GAS # 7 206 10 212 345 142 38.0 2e-33 MAVEQLGKYRLVEELGSGGMGVVYLAVDPDNRPVAVKVLHPSIANDQTARMRLAREVRTL RRIQHPRIAAVLDAELETETPYVVTEFVDGLTLSDDVRENGPFAEDELVHFGHALLDALT AVHNAGVVHRDLKPANVMIMDGEPMVIDFGIAQAADEVKVTVTGLVMGTPGYLSPEIVDG KQSNEKTDWWGWAATMAFAATGHNPYGSGGIEAVIARVASGRANLQGVPERFVPLLRACL DPKPERRPSGQMILEALVEIESGQMPSLGGAVPAPPPAPHLGDTMVGGPNVPAPPDNNIA GYAGQPAFENGPALAGIDLGAHSQDRHSAMGLMGSPRPGGHPVQQHVPPANIQPPPQDFT QQPAYMSGPVGTPYPQYGSQHHYEHYEQPVTLGPPAGASKLSALTVLALVLLSIALTALA PLITLGAVVVWQIVARTVGTMVRSHRERLVATGKASTSGTVARTPVAIVTAVLFTAVGLI LPLIAACAVALMTWLDVAGIVPRGYREETALIAAACAGAVVMWFGPTSSNLRRGSRQIAA VAVGKSTVGHWLAIGLLSVLALLAFLTVVGGVGVTWWPAQDSPLDLLPVSD >gi|294972614|gb|ADNU01000008.1| GENE 55 60113 - 60994 895 293 aa, chain + ## HITS:1 COG:Rv2969c KEGG:ns NR:ns ## COG: Rv2969c COG1651 # Protein_GI_number: 15610106 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Mycobacterium tuberculosis H37Rv # 83 291 54 245 255 65 29.0 1e-10 MAKDQVERRQAAREKARQIAQAQANREKRAKTILWSGIAVVVVAVIAVIVVLIVHSSRPA VGPATMVNGGVTLTQGEKGTTVVAHPSDKENVPDGLPAYDSGKQKENAAHVDVYLDFQCP ACKSFEDTNGAALTKLMESGDITVTYHPVSILDGASGGNKFATRAANAFMCVADAKNDDK LVDVIQNIFAQQPEEGGSGMEDDQLLGILEKSGVDLDAKTTVLEEQPTVRDCVTNVSFEK YVQQATKTAQDRDLKGTPRIQVNGKDVEPKVWANPQSFGRTLLEATGQIGGQK >gi|294972614|gb|ADNU01000008.1| GENE 56 61350 - 62390 970 346 aa, chain + ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 19 302 8 290 296 237 48.0 2e-62 MGLLEGLGTALVVFVIFIIVIAVLLFGGLRTSIFFTVRTQEAVIVERFGRFKKVCEAGLN TKMPFIETTTKPISLRVQQLEVNIETKTQDNVFVMVPVAVQYVVSQHSVREAYYSLANPE EQIRSYVFDTVRSALSTLTLDSAFESKDDIAYSVEQRLSESMARYGFRIVNTLVTDISPD SRVRDSMNSINAAQRDREAAQALAEADKIKLVTQAEAEAESKRLQGVGIAAQRKAIATGI AEQYELLREVGIEDTAEQLLLMTQYFDTMQDVARNGRSNVLLLPNNPGQLGNLSEEIRTT LLQVNAVREANEDAEKRAPRTRKEVRQKWENYSDDLPDLPPYNPES >gi|294972614|gb|ADNU01000008.1| GENE 57 62441 - 63892 1576 483 aa, chain + ## HITS:1 COG:Cgl0801 KEGG:ns NR:ns ## COG: Cgl0801 COG2252 # Protein_GI_number: 19552051 # Func_class: R General function prediction only # Function: Permeases # Organism: Corynebacterium glutamicum # 27 481 1 453 453 333 46.0 4e-91 MAREALDRFFEISARGSTVGREVRGGLSTFFAMSYIVVLNPLIIGAAADSTGKFLGGGAE PNFAAIAAATSLISGVLTILMGLIGNFPMAVSSSLGMSAFITFGIIVIPGMTWADAMGLV VIEGIILLILVLTGFRQAIFNAVPDQLKTSISVGIGMFITLIGMINAGFIANAGGNALQL GNNGYLVGWPMLVFIVTLFVLFVLHSKKVRSAILVSILGATALALIVEAIFKPGPKVSGG EAINPNGWQLTVPTLDQEWLSLPDLSTLGHFNLLGSFSSVGIITGVLIVFTLLLTNFFDL LGTMMAVANTSGLANEHGQIPHSKRIMVADAIGAIGGGLGATSANSGFIESTVGAGDGAR TGLANVVTGVLFLATIVLSPLASVIPSEAAAPTLVLVGFLMMQQVVKIDWANPEIAIPAF LTIVLMPFSYSITNGIGAGFVTFVVMKVARGKYRDVHPLMYLTAGMFVLYFVSGPLQDAL GGA >gi|294972614|gb|ADNU01000008.1| GENE 58 63921 - 64748 555 275 aa, chain - ## HITS:1 COG:ML0466 KEGG:ns NR:ns ## COG: ML0466 COG2755 # Protein_GI_number: 15827150 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Mycobacterium leprae # 22 272 41 290 301 123 35.0 3e-28 MSDPTRDSAPHEVEPQADLIHRYAALGDSFTEGLMDGEGDTFRGWADHFAIALSDSPLST PELQYANLAVRGKVLHQVVDEQLTFALDTKPDLVSFVAGGNDCMRPGAKVDELASVVENS IVALRREGIQVLMGNGYDTSAASPLLRALRSRVAIYNSHLWTISQRHGCYMLDLWGTRGL YRAQMWAEDRIHLSSEGHAVVAEKALSTLLNRSAEKSGFKIPKQPAKPVRERIAHEALWV REHFVPWVGRRIQGVSSGDSVTPKYPDYVPVSQIR >gi|294972614|gb|ADNU01000008.1| GENE 59 65146 - 66627 1387 493 aa, chain + ## HITS:1 COG:Rv3737_1 KEGG:ns NR:ns ## COG: Rv3737_1 COG2966 # Protein_GI_number: 15610873 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis H37Rv # 64 306 45 287 292 108 31.0 3e-23 MATTSAPLRKSTRKRAEDIARRTVEKIVSDPSPPTQPVPIVAMLKGTPYQEPVEARAKTE AEARLILDLAVDLGAIMLRAGASSAETELAVIATCSAMGLPNAEVDLTATSLTVHYSDPD GKLLTVMRVVRALSLHFAKLSSVHSLVAEMANGKIDYEEARSRIDAIRNQKRPYAEWVVT LAWGVLVMCFINLVGGNGVASILGFVIAIASDWFGKVLYRVNVPPFFVIMAQSTVATLVA MVTYSFGLISSPQYMVAGGIVLLLPTVSLISAVQDALTDFPLTAAARSVTLFMSFAGIVS GIAAGLYIGRLLHLREIDVIVRSGGIDALTTIVALFAAFLVAACGAIGYQAAKRTVVVAG VIGLVGFVILVGLMVLGVGNILACFVASTVVGFLCRPAAFKRGAPVIVLMIPTIFPLLQG LSIFSSVYKIVEPEEAVSLANGLSALFAALTANAAIGVGAILGDFIVRPFMKRRVNAKQQ AQNPDLAESGSPD >gi|294972614|gb|ADNU01000008.1| GENE 60 66554 - 67231 423 225 aa, chain - ## HITS:1 COG:ML1675 KEGG:ns NR:ns ## COG: ML1675 COG0692 # Protein_GI_number: 15827886 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Mycobacterium leprae # 3 222 6 227 227 254 61.0 1e-67 MALTDIMAPDWAQAMEPVADKIAHMGDFLRAEIAQGRGYLPVGNAVFRAFEEPLANVKVL IVGQDPYPTVGHPIGLSFAVNPDVRPLPRSLANIYRELYDDLGVGPATHGDLRAWQRQGV MLLNRVLTVSPGSPGSHRGAGWEDITDHAIRVLARRGGPLVAILWGRQAQALARELGEVP RIESAHPSPLSASRGFFGSKPFSRANQILRDQGSEPVVWRLPDAS >gi|294972614|gb|ADNU01000008.1| GENE 61 67362 - 68828 1460 488 aa, chain + ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 8 483 7 479 491 359 40.0 8e-99 MADFPQAQDWKMFIGGEWVDAVDGSRANVITPIDRNQVIATVPNGKAEDADVAVKAARAA FPAWSQLHFKERQKLLTQCADALAEASEDLAQLTALDTGNAVRTQARPETNILVDLFRYF GGVAGEVKGNTLPTGPDQLQFTKRVPLGVVAGILPWNSPLMIAAFKTPAALAAGNTIVLK CAEDAPLTILRMAQIIGDILPAGVLNVVTGKGSVIGEALTQHPDVDKVSFTGSTGVGRHV AKVAGARLAHSSMELGGKSPNIVFPDAMSDEVLDQVLLSTRFARQGQSCTMGSRLFIHAA IYDEFLGKLVERIKGMKVGDPRDESSDIGCVINEKQYNQIAQYIEIGRSMEGVDVAYDGS DALEVGEPGFYHAPVVFANAKNDWQTSREEIFGPVLSVIRFETEEEVIAMANDSDYGLAA YVFTKDIDRALRVANAIESGWVQVNQGGGQQVGQSYGGMKTSGFGREASLEGMLEGFTQF KQINVAIR >gi|294972614|gb|ADNU01000008.1| GENE 62 68974 - 69240 295 88 aa, chain + ## HITS:1 COG:no KEGG:Sked_31630 NR:ns ## KEGG: Sked_31630 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 11 88 46 123 124 86 52.0 4e-16 MKEGDMESEQLSELEQKVLEFERQWHTLGGVKEHAIREQFNLSSTGYFQILNSLLDNPHA YAQDPILIKRLRRIRDGRQRDRAQRMAR >gi|294972614|gb|ADNU01000008.1| GENE 63 69244 - 69852 569 202 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394499|ref|ZP_06804722.1| ## NR: gi|295394499|ref|ZP_06804722.1| transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] # 1 202 1 202 202 261 100.0 1e-68 MTKYPPDEFDSIVPSGRKGAHRRQSSGMSQTAAISLIAVLAVVAVVLVIGVVRIIGSSAV DPEEQVAGPGNSETATPQPSETSVNVKERSGTVQVLNASGVTGADTTVAKKIEDAGWSDV KTERGRSSSSTSVVYYADGFKDEAQALAEVVGAEDVKSSPKYSTDITLLLNSDIAKGLAS DEPSAEATDGASKNSEESGASE >gi|294972614|gb|ADNU01000008.1| GENE 64 70134 - 70337 332 67 aa, chain + ## HITS:1 COG:SA1234 KEGG:ns NR:ns ## COG: SA1234 COG1278 # Protein_GI_number: 15926982 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Staphylococcus aureus N315 # 1 67 1 66 66 83 65.0 1e-16 MTQGTVKWFNAEKGYGFITVDGSDQDIFVHYSEIQMDGYRSLQEGQQVEFNVGQGDKGPQ AEGVTPL >gi|294972614|gb|ADNU01000008.1| GENE 65 70532 - 72160 1563 542 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 540 3 543 547 606 59 1e-172 MAKLIAFDEEARRGLETGLNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE LEDAYEKIGAELVKEVAKKTDDIAGDGTTTATVLAQALVREGLRNVAAGADPLSLKRGIE KAVDAVTSVLLENAKDVETKEQIAATAGISAGDPAIGELIAEAIDKVGKEGVVTVEESNT FGLELELTEGMRFDKGYISGYFVTDAERQETVLEDPYILIVNSKISNVKDLLPVLEKIQQ SGKPLLIIAEDVEGEALAVLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGQVIA EEVGLKLENATLDLLGTARKVVVTKDETTIVEGAGDSDEIAGRVAQIRQEIENSDSDYDR EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVDEGIVAGGGVALIQA GKKAFDSLSLEGDEATGANIVKVAIDAPLKQIATNAGLEPGVVAEKVRGLEDGHGLNAAT GEYVDLLAEGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEPAPAVPADPTGGMGGM DF >gi|294972614|gb|ADNU01000008.1| GENE 66 72179 - 72982 645 267 aa, chain + ## HITS:1 COG:Cgl0132 KEGG:ns NR:ns ## COG: Cgl0132 COG0730 # Protein_GI_number: 19551382 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 18 265 4 251 252 92 28.0 6e-19 MWPSAVRQRATLGYSGQMTLAIFVICTTAFVGALLQRMAGMGFALVSGPFIVLVLAPIPG VVLVNILGAVSSVIVFARTWRNVHWKQAGVLIAGALAGTFPGALLASSMPTAWLNVFIGV LIVGSLATSLYLSRIFDPIKFCSRNAFLFGLGSGVMNASAGMGGPFLSSYAVLSRWQQVA FAASIQPVFITIGAASVASKLVLEEAAWPQMAPEVWVAVAVSLLAGQVAGDFGARKVPVQ LSRVVMLSLAMLGGILTIIKGVSELAG >gi|294972614|gb|ADNU01000008.1| GENE 67 73094 - 73906 699 270 aa, chain + ## HITS:1 COG:no KEGG:Kfla_1397 NR:ns ## KEGG: Kfla_1397 # Name: not_defined # Def: hypothetical protein # Organism: K.flavida # Pathway: not_defined # 1 219 4 218 275 224 52.0 3e-57 MLFVFLIVLAVTFAGAFMIQKSNRQQEQARAQAALEAVKKTAHEDVTEFGEEVAYLDTIT AGVELDEGGRQDYQRALNAYETAKETLDRVKDPDAIKHVTEALEDGRYAASCVRARVDGK PLPTRTPPCFFNPQHGPSVENVDWAPVGGQPRPVPVCAADAERVAVGAEPAARKVTTADG YTRRNYWEAGPSYVAYNRGYFNSYAGSGLLPGMLLGAMMFGGAHNFDGSYADGFNDAMNG DAGGADAGSDFGGGDFGGDFGGGDFGGFDF >gi|294972614|gb|ADNU01000008.1| GENE 68 73906 - 74121 277 71 aa, chain + ## HITS:1 COG:Cgl0147 KEGG:ns NR:ns ## COG: Cgl0147 COG2501 # Protein_GI_number: 19551397 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 2 68 4 70 97 67 56.0 6e-12 MEKLEIRDDTIKLGQALKLHGVAEDGFMAKEMIQGGDVTVNGQVDTRRGATLRIGDVVSV AGVEFEISGRG >gi|294972614|gb|ADNU01000008.1| GENE 69 74118 - 74696 595 192 aa, chain - ## HITS:1 COG:no KEGG:Caci_1862 NR:ns ## KEGG: Caci_1862 # Name: not_defined # Def: hypothetical protein # Organism: C.acidiphila # Pathway: not_defined # 1 189 1 189 189 196 48.0 4e-49 MGFFDALMGRSKPKKPQLDNLFAVPGAALTLEVSTNFRPTGVAAVAFRAMEGAAIAQAER ESVDLIKMDNATSVRQETDEFGYTWQVVRDEDRDMSRLMTNVHAINSALENQGFGPMLLC SSTYFRDSNGQNATIVYLYKRGTFYPFVQTGKNVRDTAVEFNLKAAIGSDLPMENDTSKW SPLWDAPGMTDS >gi|294972614|gb|ADNU01000008.1| GENE 70 74766 - 75677 769 303 aa, chain - ## HITS:1 COG:MA2111 KEGG:ns NR:ns ## COG: MA2111 COG0501 # Protein_GI_number: 20090955 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Methanosarcina acetivorans str.C2A # 6 300 4 294 294 237 45.0 2e-62 MSARGRFVKDRGLNFRMGTALFLNGLIYVILILGIWYVLGRSPAGVVFALVISVGAFFFQ WYFSDSIALRAMRARVVSEQEAPELHAIVDRLCQLADSPKPRVAYSNSPVPNAFATGRSP QRSVVCVTQGLLQTLEPKEVEVVLAHELSHVAHRDVTVMTIAGVTGVVAGLLVRMGFYTR YRGSNNNNSALVLLGLMAVGAIVYVLSFFLIRVLSRYRELAADRAAALLTGAPSTLASAL TKLSGQMTTVPTQDLRAQGAANHLAFLPAVNGKSVKQLFSTHPSLEQRLEQLSKISTQLS RPH >gi|294972614|gb|ADNU01000008.1| GENE 71 75699 - 75968 416 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394508|ref|ZP_06804731.1| ## NR: gi|295394508|ref|ZP_06804731.1| F0F1-type ATP synthase, beta subunit [Brevibacterium mcbrellneri ATCC 49030] F0F1-type ATP synthase, beta subunit [Brevibacterium mcbrellneri ATCC 49030] # 1 89 6 94 94 149 100.0 8e-35 MGEGQFNVADVDEEQLQTYDNEVEKAVADKDLAHVQDALTRLREFVLEHATPVDEDYLGP SDIVIPYADANLEDIDELLTGEGFIPDLS >gi|294972614|gb|ADNU01000008.1| GENE 72 75980 - 76756 968 258 aa, chain - ## HITS:1 COG:MA1460 KEGG:ns NR:ns ## COG: MA1460 COG1842 # Protein_GI_number: 20090319 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Methanosarcina acetivorans str.C2A # 1 228 1 227 246 174 53.0 1e-43 MSIFKRIAMIFGAKANKALDKAENPNETLDYSYQKQLELLQKVRRGVADVATSRKRLELQ IGQLEQQQDKLQGQAQKAMEMGREDLAREALTRKSGLNQQIADLQSQHQNLQAEEQKLVN ASQRLQSKVESFRTRKETIKANYNAAEAQSKIGEAFSGISEEFGDVGLAVQRAEDKTAAL QARAGAVDELIASGALDDVTAGPNDDIDRQLAQLSSDSDVESELARMRDSLPASNNSARP QLEEAQDAQVDDVEGEQK >gi|294972614|gb|ADNU01000008.1| GENE 73 76892 - 77182 265 96 aa, chain - ## HITS:1 COG:no KEGG:Krad_3624 NR:ns ## KEGG: Krad_3624 # Name: not_defined # Def: hypothetical protein # Organism: K.radiotolerans # Pathway: not_defined # 1 95 1 95 96 70 45.0 2e-11 MSYFEVDSERVISAAGMANKSVETLSTETDALMAHLNSLADSWKGGAAQNFQSVAKEWEG VQRRVHESLGKIRDALQTAGTQYSDVENSNMRMFSA >gi|294972614|gb|ADNU01000008.1| GENE 74 77347 - 78786 1143 479 aa, chain - ## HITS:1 COG:Cgl0852 KEGG:ns NR:ns ## COG: Cgl0852 COG0265 # Protein_GI_number: 19552102 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Corynebacterium glutamicum # 27 479 4 441 441 174 35.0 3e-43 MSNNQFGSGSDDPSFPRTFPPAEPQPQQPTAPQQQPQPTEPQSQQAPTSQQSSGYDTYGS GTASYGYDTYGHQNSYGIATGPTPAPTAPTPQPWATSATTPAKEQRKGPSWGGVIAIAAV AALLAGGLGAGATYALQSLQSSSSTQETSTADEKIKTTEVPDWATIAADAAKSVVAIQVG RDGKISELGSGFVYKHKNSDDLFIITNNHVVASGDSAGGEVKAVFRSGATVATSIVGRDP ETDVAVLKMKDVPRGVDALPVGNSDALKVGEPVMALGNPLGLADTVTTGIVSALNRPVAT SNPGRSDEPEVATITNAIQTDAAINPGNSGGPLVNGAGKVIGVNSSAAALPGTAESGQAG SIGIGFAIPIAQATWIADQLIESGHAQHAFLGVKITSGEVSRSGVTVGSAVVDDVESGSP ADQGGLNKGDHIVAFDDTPVNGAVSLQALTRSKKEGDTVKLTIVRGGHPTDIHVTLASK >gi|294972614|gb|ADNU01000008.1| GENE 75 78783 - 80429 1486 548 aa, chain - ## HITS:1 COG:MT0783 KEGG:ns NR:ns ## COG: MT0783 COG0642 # Protein_GI_number: 15840173 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 2 387 20 392 485 192 37.0 2e-48 MMTLMTLVLTGTGAWTLENLRASLIERTDERLVNASQALAIQAAEQVLTPSPIKPRSETS ESVRKLLPGSYYVQFFTHDGQEIGSPLAPSETNVPILPTIDEQKVSEMQGQPFSVPGTQS QWRVLALHVQDSDIVVAIAVPFDRDIDGISEYTQNTIVGIGMLALAIVAGVGYFAITNTF RPLKEIEKTASRIADGDLSQRVPEYPRNTEVGRLSAALNTMLGHIEDSFDSRRRSENRIR QFVSDASHELRTPLVTIRGYAELYRQGAVTDPEMIGQAMSRIEAEAKRMGVLVEDLVTLA RLDERRQVETGWVDLGDIVRDAAADAAAQAPDRDISFIALDGTDAKPVPKIYGAESKLRQ VIVNLAGNAVRHTPPGTAIEFAVGTAGIPVPGPEHAVDKGNKDKAGKEKTGKEKPTQLAR TKALTNRILKREPLTDQSDHAITPDVNTMGVQVSDSLKGFPAGRVRFEVRDHGDGIDSED VPRIFERFYRLDASRTRDTGGSGLGLSIVKAIVESHHGKISVQPTPGGGATFRVDLPIPP EEPRKEQQ >gi|294972614|gb|ADNU01000008.1| GENE 76 80522 - 81280 862 252 aa, chain - ## HITS:1 COG:MT0782 KEGG:ns NR:ns ## COG: MT0782 COG0745 # Protein_GI_number: 15840172 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 3 249 5 239 240 262 57.0 5e-70 MTTQHDNSDVEATLLVVDDEPNIRELLSTSLRFAGFDVVSAANGADALRLAEQNDPDLLV LDVMLPDMDGFTVTRRLRQAGKHMPVVFLTARDDTSDKITGLTVGGDDYVTKPFSLEEVV ARIRAVLRRTHALDEEDDAVLNAGDLELDDDTHEVRRAGIYIDLSPTEFKLLRYLMLNAN RVLSKSQILDHVWEYDFGGDTGIVESYISYLRRKIDVAPETDEAGNPIDMEWTPMIQTKR GVGYMLRTPESK >gi|294972614|gb|ADNU01000008.1| GENE 77 81452 - 82534 1035 360 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_39160 NR:ns ## KEGG: Asphe3_39160 # Name: not_defined # Def: permease, DMT superfamily # Organism: A.phenanthrenivorans # Pathway: not_defined # 9 298 23 314 346 195 38.0 3e-48 MTTRPTLWGFILTLISVVAFALAAPIAKTMYASDWSAGGVTFARLTGCSVLLMVPALWAM RGKWHNLKGNYMRVIMYGVITMAGVQLLFFLAVERLKPSIALLLEMTAPILIVLFLWIRT RVNPAIATLVGMVVAMAGVVIVLDPRGATLDMLGVLYALAAAGCLATFFVMSARSDMGIS PVPLLAFGMGVGAIVVGIVCAVGLVPFKVAYDPVTVAHFTIPWWAGVLAIVAVTILAYVT GVIGLQLIGATVGSFLNLLEVPASVVASWWMLGDLPTYVQLCGGIVVLAGVVFVKLGENQ QTKRERVRIEDIDPATGQIPVIVEEPDEEQSRPSAATSPSQANPADTSAEVACKSPCTES >gi|294972614|gb|ADNU01000008.1| GENE 78 82547 - 84175 1570 542 aa, chain - ## HITS:1 COG:Cgl0793 KEGG:ns NR:ns ## COG: Cgl0793 COG1061 # Protein_GI_number: 19552043 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 3 536 6 542 557 673 61.0 0 MTGPLIVQSDRTLLLESGHPDAQVAAVAIAPFAQLSKTPEYIHTYTITPLGLWNARASGY DAESVVNTLIEFAKFPVPHELLVDIVDTMDRFGVLTLIDHPTHGLTLQSTDTALLEKLRE HPDMQGILGQKIDDESTEVYPSERGELKHRLLKLGHPVADRAGYISGEAHTIGLTDSWHL RDYQERAVDAFVQGESGVVVLPCGAGKTVVGAATMSRVQTTTLILVTNSVSAKQWKAELL RRTSLTPEEIGEYSGNLKQIRPVTIATYQVLTTRRKGSYLHLELLDARNWGLVIYDEVHL LPAPIFRLTAGLQARRRLGLTATLVREDGREEEVFSLIGPKQFDVPWKEIEAAGHIATAT CHEVRVKLDRDLRSTYASAEGENRYRLAASCEAKVRATKHIVKEHPDAQLLVIGQYLDQL EELGEALNAPVLTGKTPESERERLYEDFRNGEVRVLVVSKVANFSVDLPQASVAIQVSGS FGSRQEEAQRLGRILRPKENALPATFYTIVTANTVDEDFAQHRRRFLTEQGYSYTIENFP QD >gi|294972614|gb|ADNU01000008.1| GENE 79 84172 - 86172 1432 666 aa, chain - ## HITS:1 COG:no KEGG:Arth_0788 NR:ns ## KEGG: Arth_0788 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 130 641 286 806 834 139 27.0 7e-31 MSTVSFASWISSAPKETLIAILECRRDLVRSDTASFQRLAGLASSRAAVAVGLESLNAQQ LQLAWKMARSARTGPLITGLPESPDLNALIDAALVWPSGDGHRIQPEAIALLPTTASAVA TPPHWTTLDTPVSPETHTVPDSVSTNAAAAAVNQVLTDLGAVVEALAALKPSQLVRGGIG KRDVSTLATRTSADVSTVVFLLELARALGLIGVSDSPDDPQWVPTVAWDAFHDDRATAYV AAVGSWLTLVPNTLHVATGTTWNDQKTHVLGTHRPPPAPRPVMPFARYRVLTLLNELARD QQTIPTADLVAHAQFHHPLTLGFDEPTVRQILTEAEHLGLTFTPFHATDSSGLTHLGAAL VEHIQSRMTAELSPLCFDRDRLAAPDEFAHLVTPLLPELERTVITQSDLTAIATGPLHPE TAAALDQVATVETRGQGTVYRFTAASITRALESGLSTAAILELIERVSSTEVPGPLDFLI RDTAAKLGRVTVSAARGVIVVNDPEELDPLIADPLFAAAKLTRVAPTVAISSVGPERLGV LLSTHGIDVMKSSPPAPARARVPTNTRTVRTRTTRMNDLGAFYHMLTSHTGDAQGAPITI ADTIREAIDSRTPLTLTVATATGGRQAVTLTPIAVAGGLVRGRRSSGDVTVPLVRVIAAQ PSKEVS >gi|294972614|gb|ADNU01000008.1| GENE 80 86093 - 86308 96 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYCSNIIQGFSHSGYLPTSETIFSPDSSHTSGTPSGTTPGTTLVRDVYCVICVMDQFRPQ GNAHSDPGVSP >gi|294972614|gb|ADNU01000008.1| GENE 81 86400 - 86654 281 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394517|ref|ZP_06804740.1| ## NR: gi|295394517|ref|ZP_06804740.1| hypothetical protein HMPREF0183_0238 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0238 [Brevibacterium mcbrellneri ATCC 49030] # 1 84 1 84 84 124 100.0 2e-27 MTGERPDRVPQRASTMSGTDFLLAVLALLFSVVGALSVAAVVFMGVRDHTPPTFLMACAY IASPVAILLLGVLWVRMVIKRRKA >gi|294972614|gb|ADNU01000008.1| GENE 82 86710 - 87072 420 120 aa, chain + ## HITS:1 COG:MT0893 KEGG:ns NR:ns ## COG: MT0893 COG1278 # Protein_GI_number: 15840284 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium tuberculosis CDC1551 # 1 119 1 134 135 94 41.0 3e-20 MPVGRVKWFDQEKGFGFVTSDEGDMFLHQTALPDGVKVAPGTRLEFDVVDGRRGKQVLKA RLIDAVKRNRDPKKTADMIDDVITLLEDTSAGLRQGRFPDPVFSNKVAEVLRHIADDLEG >gi|294972614|gb|ADNU01000008.1| GENE 83 87072 - 87932 501 286 aa, chain + ## HITS:1 COG:no KEGG:Arch_1621 NR:ns ## KEGG: Arch_1621 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 12 256 8 257 265 223 48.0 1e-56 MSGLFTAWLESVDPGSTLELDPVLENAVDIARRALLDVVPAEVVGRHLGVSCEARCSATH TFACLDPAYPGWAWTAVIARAPEDDAPVTVCETALLPGEEALTAPKWVPWQDRIQPGDLG TRDVLPKKDFDDNLEGGFEQVEVVAGDNVDQIPNYELGLGRVRVLSSTGLSRAATRWERS ESGSDGDYSRHASAHCSTCGYLLPIAGSLRMQFGVCANEWSPFDGRVVSLDSGCGAHSET DVRKRREETPQAVIDDKVEHFDMVDTTESENTGGSDDTTEHNQSEH >gi|294972614|gb|ADNU01000008.1| GENE 84 88035 - 89288 1123 417 aa, chain + ## HITS:1 COG:CAC0458 KEGG:ns NR:ns ## COG: CAC0458 COG0477 # Protein_GI_number: 15893749 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 19 375 30 385 409 166 32.0 6e-41 MSEPNYRNWFAAALTSNTGMWMQRTAQDWLVLTELTDHNAAALGIGMALQLGPQLLLFPF AGAIADRFSKRGVLMITQALQGASGFVLLTLYLTGALNIWWVYGMSLFLGLVMCLDAPTR QSFVSELVGDRLLPNAVSLNSASFNGARLLGPGIAGLLTASVGAAVVFAISGLGYIATLA VLIGLDKSRLHPSPRSKAHGLKSVLGGFTYIKTRPDIVVVLSILFVISTLGFNFNIFTAT MARVEFGKDAAGFGLLSSIIAIGSVAGALRSASREKPRLRYVFWAAGGFGFVGILAAVAP TYELFAITLVGVGFATITMLTAANGFVQTTIPAHVRGRVMSMYTAVLMGGGAVGAPISGF IANTYGPRIALLVAGTSGIIGITIGTLWMMTAKNLRVHRARSRRLVFFTYDGKTPRK >gi|294972614|gb|ADNU01000008.1| GENE 85 89332 - 89826 381 164 aa, chain + ## HITS:1 COG:no KEGG:Arth_3993 NR:ns ## KEGG: Arth_3993 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 1 161 1 162 166 106 48.0 3e-22 MTTIIVVTVLCALAICVGLLGIVIPVLPGSILIWISSLVWAIFANTTPTWIVFAIITVCV AAGMASSWVLTGRKLSTMKIPKSTLLVSGALALVGFFLIPVVGLLLGFVVGLFVMEYQRL KDASTAWASSWAIIKTAALGIVVELSFASIAALAFAVGCFVYFT >gi|294972614|gb|ADNU01000008.1| GENE 86 89871 - 91088 1080 405 aa, chain - ## HITS:1 COG:MT0907 KEGG:ns NR:ns ## COG: MT0907 COG1932 # Protein_GI_number: 15840298 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 34 403 6 374 376 439 59.0 1e-123 MAHRPIVPPARSTHLDPPALSLPAFPTLAHVTETTYAPIPSELLPRDGRFGAGPARIRDE QITALMQAGRTVLGTSHRQAPVKNLVKRVREGLHQLFSLPEGYEVVLGNGGSTCFWDVAT FSLVRSRAAHAQFGEFGSKFAKATAQAPFLEDSVIFDAQPGTATIPQATDGVDVYAWPHN ETSTGVATTITRPHGIDDDALVVIDATSAAGGLPVGLSQTDVYYFAPQKNMGSDGGLWVA VMSPRALQRAQEIKDSGRWIPASLDLVTAIDNSRKNQTYNTPAVATLLLLAEQIEWINAQ GGLAWATERTRASSQLVYDWAEKRTETTPFVTEVQDRSAVVCTVDFDDSVDAAEVAKTLR ASGVVDVEPYRKLGRNQLRIATFVSVPPEDVEALLACIDYVLDNR >gi|294972614|gb|ADNU01000008.1| GENE 87 91080 - 91733 469 217 aa, chain + ## HITS:1 COG:sll1440 KEGG:ns NR:ns ## COG: sll1440 COG0259 # Protein_GI_number: 16330895 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Synechocystis # 6 217 21 230 230 167 47.0 2e-41 MSHLESLATTRTEYQGNSSDVVGENPFEQFSRWYEEVAEHVHEPNAMVVSTVDEDGPDSR IVLLKEFSPEGFVFFTNYDSMKGRQIAEHPHVALVFPWHAAHRQVRVRGVAERVPAQQSD AYFAVRPRGSQIGAIASRQSQPVGSREELDEAYARAEAAAGAPVVRPDNWGGYVVRAHTL EFWHGSESRMHDRFQVKASQVSRLDDAAAWTVQRLFP >gi|294972614|gb|ADNU01000008.1| GENE 88 91799 - 92527 621 242 aa, chain + ## HITS:1 COG:MT2784 KEGG:ns NR:ns ## COG: MT2784 COG1321 # Protein_GI_number: 15842249 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 15 242 1 230 230 213 56.0 4e-55 MGHWPTGRHELRGNVKDLIDTTEMYLKTIVELEEQGVRPLRARIAERLEHSGPTVSQTVA RMERDELLIVDSDRSLELTESGRELATSVMRKHRLAERLLSDVIGLDWELVHDEACRWEH VMSQQVEERLVKILPTTSTSPYGNPIPGLEELGLEPETGPQARALTDVATTDKDLTVKIQ WLGEPLQVDTFLLGQFKRTGVVPGAVASLRVNGEYLTLTVEGEPEVLDLPPETADNVFVT VV >gi|294972614|gb|ADNU01000008.1| GENE 89 92514 - 95609 1972 1031 aa, chain - ## HITS:1 COG:PA1400_3 KEGG:ns NR:ns ## COG: PA1400_3 COG4799 # Protein_GI_number: 15596597 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Pseudomonas aeruginosa # 548 1024 1 484 508 452 49.0 1e-126 MTHTLLIANRGEIAVRIASTARLMGIPTVGVYTPEDVTSLHVDACDTAVEILSYLDAEAI LDAGVKNGATLVHPGYGFFAESAEFARKVRDRGLTFVGPTPQALEAVGDKERTKSLANTL GISVTQSTGLLSGDAGVAQAVQLLEESPDGIAIKAVAGGGGRGIRVVTNHNDVVQALSQC AHEARVGFGDDRVFAEQWVQNARHVEAQALGASTGVHILGDRDCSLQRRRQKVIEIAPAM LAENVRKELHDAARTLLEHVNYTSLATVEFLVTDSGWYLMEVNPRIQVEHTVTECVTGLD LVELQLHEAMGTGVEISPTPSQRVAVQARVCAERFTEDGDIVPMTGTVDTFDAPHDAGVR VDTWIRSGTEVGTAYDSLVAKVICTGHDLDSALSNCKKALARTQVRGVNTNVSFLQALLP YAVDATTSTIDTQFARIVEATPEALVEADEHSVPTDLADGEEAILAPVSGTVVSLEPNEG ELGLIEALKMHHPIVAPPHVNARPLVNVGDTVVKGQPLWIVQGANVAHDNATRATSQPHP GIQEVNDRHAVTHDEARPEAVVKRHGQNRRTARENLADLIVPGTFVEYGALAIAAQRKRR SLEELITKTPADGLVGGIGQVKTTSGPVSAVIMSYEYMVLAGTQGARNHAKTDRLLELAH RKKLPVVFFVEGGGGRPGDTDIAPGTQLNVSTFAALARLRGVVPLIAVAAGRTFAGNAAL AGVCDIIIAHEDANIGMGGPQMIAGGGLGTFDVSEVGPTAVHRRSGAVDIVVPDDQAAVK AVQEVLGLSQHVIEYEHTGEPQNTVPADRLRAFDMRDVITNVADDGTFLELRTDYASGAI VGFMRVHGHSFGFIANNNHHLGGAIDVDAARSFAQHIACVENLGLPLISFVDTPGFIVGP EAEKEPGMRAFGDLFVAGAHFTGSTGVVIIRKAYGLGAMAMTMGYLHATDFCIAWPAGEM GPMGLEGAVRLGYAKELAQVEGEEREQLYSRLLDELYAQGRALSAAEVFDIDDVIDPVHT REWIASLITPQ >gi|294972614|gb|ADNU01000008.1| GENE 90 95609 - 97291 1400 560 aa, chain - ## HITS:1 COG:DRA0309 KEGG:ns NR:ns ## COG: DRA0309 COG0318 # Protein_GI_number: 15807969 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Deinococcus radiodurans # 35 558 41 567 577 367 40.0 1e-101 MSYAPLWESAARELEELRNRPAETQSQIDSVDGTVATWVAHWALTRPETTAVHFYGRDIT YSELDNLADRAAEWLRLHGVNTGDRVAMYMGNCPQYLILFVAIMRLGAVLVPVNPMFRAS DFTYEINDSSPKVVVAQEELREVVEASRADLDSVPHVAYTRLSDTLTATPQPRAPFEREE VSADWQEITSTAPLAQRPEVDPASLAALNYTGGTTGLPKGCEHTHEHMVYTALSTLAVRG MRPGDKPEVYLCFLPIFWIAGENAGILNPLVDGSTVVLLTRYHPDAVLELLEDQKVTFMV APADVYYELLAKDVASRSLVLDQVLAVSFVRKLTVDLREQWMKATGSLLCEASYGMTETH TMDTSTFGLHENNQDLQAEPIYTGYPVPGTQIVVVDHDLKPVKLGEIGQILVHSPSVLTR YFNRPEATEDSLIEGWLLTGDTGRFDDHGGLTYLARTKEMIKVNGMSVFPAELESFFKQH PEVGSVAVAPREDNKRGQVPVAFIVRAEGSQITADELTEWAHTNIAEYKIPEITFVEAMP MTATGKIRKVDLVAALNQED >gi|294972614|gb|ADNU01000008.1| GENE 91 97300 - 98502 1613 400 aa, chain - ## HITS:1 COG:PA2550 KEGG:ns NR:ns ## COG: PA2550 COG1960 # Protein_GI_number: 15597746 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 2 398 3 399 409 471 58.0 1e-132 MFEQTERGKDYEGRLNAFMDEFVYPAEPVYHEQMREVGPHGMPQVLEDLKAEAKSQGLWN LFHPHPEWGPGLTNSEYAPLAEITGRSIEIAPEAINCNAPDTGNMEVFTLFGTDEHKEKY LKPLLDGTMASAFAMTEPAVASSDATNIELLMKKDGDEYILDGRKWFASNAMHPNLGVFI VMGKTDPNADTHRQQSMMVVPADAPGVTIVRNLPVFGYDDREGHAEVIFDQVRVPAKDVL KGEGEGFAISQARLGPGRIHHCMRAIGCAERALELMCKRAEERVTFGQKLSQRANIQDWI AESRIEIDQARLLTLHAAHLMDTVGNKVARTLISEIKVAAPVMALKVIDRAIQVHGGGGV TNDFPLASMYAHMRTLRLADGPDEVHKMTIARHELKKYRK >gi|294972614|gb|ADNU01000008.1| GENE 92 98506 - 99306 756 266 aa, chain - ## HITS:1 COG:DRA0195 KEGG:ns NR:ns ## COG: DRA0195 COG1028 # Protein_GI_number: 15807861 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Deinococcus radiodurans # 1 258 1 246 278 176 40.0 3e-44 MEVNGNVAVVTGGAGGIGQALAAELVSRGARVVVADAAEAVTEVAEKLGCHGWQGDVSTV AGIEALIAETEKKYGPVDLFFANAGIMGQSGLGDEETWDTAIDVNLRAHIRAAKLLIPGW QERGRGHFVSTASAAGLLTQLGQAEYSVTKHAAVGFAEWLAITYGGDGINVTCVCPMGVN TAMLQAGTTAQNVTEKVAAAAVTQAGPVHEPQHVAQIVLDGVENNEFLVLPHPEVLDMYR MKGSDYQRWISGMQRYQTTLTNQHKE >gi|294972614|gb|ADNU01000008.1| GENE 93 99405 - 100937 1469 510 aa, chain + ## HITS:1 COG:BS_yhfL KEGG:ns NR:ns ## COG: BS_yhfL COG0318 # Protein_GI_number: 16078091 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Bacillus subtilis # 12 505 1 507 513 317 37.0 4e-86 MFQRRIVEFSPLNLATPVFDFARKDPDRMQLRGPLTEPRVEITRGQLASLVARRAQQLAP QVSEGDRMLLIAPTTPEFVVEFFAAQAIGLTIVAINPLATTREIDYFLEDSGASRVVAHP AVAQAGQESAQKAGVTFETCQLITPADLADLPPFDDFTPVERKGEDVAVLLYTSGTTGRP KGAMLTVSNLTNAARIGGIDSKMTEDDRGGTSLPLFHVFGLSSILMVAVAHGTQLTLLPR FDPVEQLKVMSHDKLTVVSGVPTMWNAIVHAPEGDYDFSHMRFALSGGASAAVELIRKFE ERFGAALTEGYGLTETSAMVSMNPLDGVRKPGSVGVPLPELEFCIKDPTGAEVPVGEVGE VCSRGPVNMPGYWKREDATAQVIDEDGWFHTGDLGRVDEDGYLYIVDRLKDLIIHGGYNV YPREIEEAMYEHPGVLEAAVLGTDDEHYGQIVTAVITPMPGVTLTEEEIEAFARERLSAY KIPRIIKFVEALPKGPSGKILKRAIDVSQL >gi|294972614|gb|ADNU01000008.1| GENE 94 101034 - 102458 1284 474 aa, chain - ## HITS:1 COG:PA3595 KEGG:ns NR:ns ## COG: PA3595 COG0477 # Protein_GI_number: 15598791 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 9 431 7 423 469 271 39.0 2e-72 MTASSAIDPTQAHHHLKHRKLLASGVVGSSIEWYDFFLYGTAAALVFPHVFFPSEGPLVA TLLSFATFWAGFIARPLGGVIAGHYGDKLGRKPVVVVSLIVMGIATFVIGCLPGAASIGL AAPIALGLCRFAQGLAAGGQWGGLALLLTESAGPKNRAYSGSFNQIGVPAGAFLGNVVFI TATYALTQEQFISWGWRIPFWFTAVLFPVVLFIHHKVEDSPEFRELEKKTSETQSQIVKA PLWVAVKKHWKTILLGCGLLASTNCIFYISIAGVLSYGANYLGLDRTHMLIAGALACVIG IVTTPLLALWSDRIGRRPVIIVGGAGIFLFVPIYFMLINTGNIVLFGVAVCVSSVFQCAV YAPLAAYLGELFEPEVRFSGASLAYQLAAILISGATPILMTSLIASSGNTHGVTIMVMIM GVITVVSALLLKETNPKWVREDPHAVPGEFLYEQKAVQSASFQTASEEDPEPVA >gi|294972614|gb|ADNU01000008.1| GENE 95 102900 - 103724 180 274 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 127 273 31 174 175 73 31 3e-12 MAGKKMGRHASDARVKTPLTELTEALNANSGAMGKRAAVVAAAGGLLVTATLPSTADAKD DATVSADAAKADEAETFTAQKATAVAEADVADIATGVAANVTAKKAPEPVAEPTSEDSEA NASTSNSRSGAPAASSSSSSSSSKKSSKSEANEDVALPSGSKAQQVLAIARQYVGTPYVS GGTSPSGWDCSGYTSYVYGKVGVKLPRTSGAQRNAGKTVSRAQAQPGDIIWSPGHVGIYA GNGMMYDAGNPRVDTSYRSIDWMVRSGAKFIRVL >gi|294972614|gb|ADNU01000008.1| GENE 96 104016 - 104612 255 198 aa, chain + ## HITS:1 COG:ML1254 KEGG:ns NR:ns ## COG: ML1254 COG1403 # Protein_GI_number: 15827641 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Mycobacterium leprae # 27 171 49 195 215 133 46.0 2e-31 MSVFNEASRLCAAPRAFSYPPQEKKVKTLVLNAGYEPMSIVSFRRAIALVLAGKATVLAS EGLLIRSAHVSIDQPSVILLNRYVQPPRGRTTALSRRGVLRRDKHLCAYCGEGANTVDHV LPRSRGGQNTWTNLVACCRSCNNVKGNRTPDEMGWKLLFTPVAPQTGHWWLRDIENPAKR WLPFLQLARSPEVAAKSA >gi|294972614|gb|ADNU01000008.1| GENE 97 104814 - 105821 949 335 aa, chain + ## HITS:1 COG:MT2698 KEGG:ns NR:ns ## COG: MT2698 COG0589 # Protein_GI_number: 15842163 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 15 330 9 293 297 107 33.0 4e-23 MAEEQMTTEVADPEAIIVGIDGSSASRNALMWAIDEARAQKKSIRLVGAYTVPSVASATV DVSYVPVDDSAVRAAVSDSLREAASLVKEAGVEVEAIIEIGDAAGVLVEESKQGSLAVVG SRGRGGFAGRLLGTVSSALPAHSHCPTVVIPVGWSNDSKRTPEQTASRPIRNAGGDSFED TIEADTVTGPDYTGQVVVGIDALGAESQALWQAAELANRRGSSLVLLGVITTTVVGPEWL PSTGDMKRYVDKGADKLAIAAQAVREKYPDLDVSWSLYDGQPAEALVRASDTASVLVIGS RGRGGFAGLLLGSTSQSVLPYSRCPTMVVRVKRES >gi|294972614|gb|ADNU01000008.1| GENE 98 105923 - 107482 1134 519 aa, chain + ## HITS:1 COG:SP1479 KEGG:ns NR:ns ## COG: SP1479 COG0726 # Protein_GI_number: 15901329 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Streptococcus pneumoniae TIGR4 # 304 485 270 447 463 159 43.0 9e-39 MLFKKVMASTALVATVVAGGIACSSNVNDEERGNGGASTSYDGVPDSVKDRLQRLAIVKN KAGVSIDAQLVALQGAASLNEMVEEFALDQLGEGGAFDGKKGFTPVPTPVSKQAELDTFI REPDSKPHGSDDSTAQAGGLTESNTTSGPEESGSSSEEAPTSDATASPEGQETAGADDTS AGGDADITLRNEVVFAGGKYVVSRVEALVKGEKTVKLLVTDLEADKTMPAKDMFTGETLP SDDDLDDLTFGKDALPSYKGQKKTYDELSDLGKKVADNGSKDVVKLDEDSEEGPGFSCAL AACVALTYDDGPGGNDLTDRLIKSYKKHHAHATFFVIGKNVKAYPEEVKKMVDAGHEVGN HSYTHPILSKVGAKKAEKEIADTDKAIEDAGLEKPTLLRPPYGATNRKVDDVAGKHDKRV IMWDVDTLDWQTKSKPKTVATVKQSVQPGAIVLMHSIHQPTVDATDDILQYLEDQGYAMV TISELYRGAKFDAGKEYFCKGSHMGMCSTPEHPYVTKNS >gi|294972614|gb|ADNU01000008.1| GENE 99 107627 - 107914 452 95 aa, chain + ## HITS:1 COG:no KEGG:Bfae_24860 NR:ns ## KEGG: Bfae_24860 # Name: not_defined # Def: transglycosylase associated protein # Organism: B.faecium # Pathway: not_defined # 22 91 22 91 94 68 75.0 8e-11 MGLLWSIISWIIIGGLIGLIARAVMPGKQGMGFMMTVILGVVGAIVGGFIGGLLGGDGVQ GIMNNPWSLGTILLAVIGALIVMVIYGFLARKANK Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:47:53 2011 Seq name: gi|294972587|gb|ADNU01000009.1| Brevibacterium mcbrellneri ATCC 49030 contig00009, whole genome shotgun sequence Length of sequence - 20978 bp Number of predicted genes - 26, with homology - 23 Number of transcription units - 15, operones - 8 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 874 477 ## Ksed_08050 TrwC relaxase 2 1 Op 2 . - CDS 931 - 2334 872 ## Ksed_08050 TrwC relaxase 3 1 Op 3 . - CDS 2310 - 2873 414 ## Ksed_08050 TrwC relaxase 4 2 Tu 1 . - CDS 3229 - 3672 271 ## COG1846 Transcriptional regulators 5 3 Tu 1 . + CDS 3720 - 4709 646 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 6 4 Op 1 . + CDS 4814 - 5533 418 ## Franean1_4510 putative esterase 7 4 Op 2 . + CDS 5530 - 6072 215 ## Rfer_0153 hypothetical protein 8 5 Op 1 . + CDS 6705 - 7199 367 ## AARI_03850 hypothetical protein 9 5 Op 2 . + CDS 7240 - 7500 68 ## 10 6 Op 1 . - CDS 7523 - 7942 374 ## gi|295394545|ref|ZP_06804767.1| hypothetical protein HMPREF0183_0265 11 6 Op 2 . - CDS 7951 - 9006 714 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 12 6 Op 3 . - CDS 9041 - 9487 135 ## 13 7 Op 1 . + CDS 9332 - 10756 812 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 14 7 Op 2 . + CDS 10569 - 10925 191 ## Mlut_00370 conjugative relaxase domain protein, TrwC/TraI family 15 8 Op 1 . - CDS 11327 - 13330 589 ## COG0433 Predicted ATPase 16 8 Op 2 . - CDS 13317 - 14417 437 ## Rsph17029_3199 hypothetical protein 17 9 Tu 1 . - CDS 15086 - 15289 230 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 18 10 Tu 1 . - CDS 15475 - 15906 260 ## BBMN68_495 histidine kinase, dimerization and phosphoacceptor region 19 11 Tu 1 . + CDS 15949 - 16206 91 ## 20 12 Tu 1 . - CDS 16084 - 16377 191 ## gi|295394553|ref|ZP_06804775.1| DedA family membrane protein 21 13 Tu 1 . - CDS 16672 - 17355 394 ## Blon_0467 protein of unknown function DUF214 - Term 17569 - 17604 3.3 22 14 Op 1 . - CDS 17675 - 18091 209 ## Blon_0467 protein of unknown function DUF214 23 14 Op 2 . - CDS 18103 - 18312 117 ## Blon_0468 ABC transporter related 24 14 Op 3 1/1.000 - CDS 18325 - 18831 312 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 25 15 Op 1 . - CDS 19047 - 20153 542 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 26 15 Op 2 . - CDS 20107 - 20472 221 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) Predicted protein(s) >gi|294972587|gb|ADNU01000009.1| GENE 1 1 - 874 477 291 aa, chain - ## HITS:1 COG:no KEGG:Ksed_08050 NR:ns ## KEGG: Ksed_08050 # Name: not_defined # Def: TrwC relaxase # Organism: K.sedentarius # Pathway: not_defined # 1 290 752 1041 1160 302 68.0 1e-80 MQHITDEGTVYAREAASGRKSPRTVALPAEYLSEHAHLSYAATAYGVQGATVNTAHTILS EATNAAGVYVGMTRGRDTNRLHVVAENLTDARAQFIEAMEHDPADRGLDHATAQAVEAVQ GLVADGPVRLVTDELARLDQKVERAERRAQRWEQTAARLDAQRSVHRAEDEEQAAALRRA EAEAEQIRAEVARPLTVQAEHDGAAYLDAVETEAAASTRLVTARRFGRHKARTEHHAATE QARTVRVQVREVWGLEPPRNAEALPGWAARQAEQHAEADPRVIDAAQQIEI >gi|294972587|gb|ADNU01000009.1| GENE 2 931 - 2334 872 467 aa, chain - ## HITS:1 COG:no KEGG:Ksed_08050 NR:ns ## KEGG: Ksed_08050 # Name: not_defined # Def: TrwC relaxase # Organism: K.sedentarius # Pathway: not_defined # 2 467 190 655 1160 627 77.0 1e-178 MGGKWRALTTAALFKQQGAIRALGTAVIAAHPQLAATLAEHGLTLDPVTGEVVELEPFNA SMSKRSAQIKRNLDRMGAEWQAEHPGETPGPALTARMQDAAWAFQRPSKKPADLKDEQWW RQELTNAGYAPDTLTRRVAQAAVSVDDLAVQDVASRALDRCAAAASTWTPHTVAEQVARI ITEADVRATPARLREFIDLATDLATEDCFSVLPPEAPTPKHVAHLTSLNVIAAETALRDQ LTAATPEREPEHPDVTRTAQAARLDAGQTVAAAAVASTDPLVIVEGAAGSGKTTMLRTAI TVGAEHGRPSRVVASTLRAAQVAEEELGVPATSVAALVHAHGWRWNDDGVWTRLAPGDTD PTTGSTYNGPPENARLDRRVRVIVDEAGMLDQDTTHALLTITQEAGATVALIGDRAQLPA VGRGGVLDMAAQIRGRTYDMTELHRFADAEYAALTLAMRDREHPGAI >gi|294972587|gb|ADNU01000009.1| GENE 3 2310 - 2873 414 187 aa, chain - ## HITS:1 COG:no KEGG:Ksed_08050 NR:ns ## KEGG: Ksed_08050 # Name: not_defined # Def: TrwC relaxase # Organism: K.sedentarius # Pathway: not_defined # 1 187 8 194 1160 247 71.0 2e-64 MKGGVLLFRGSGVAARRYVEADRSRADEYYLRADDAIAEYAVIDATGEVTAIRSLTADEY EGWVDWINPATGESMGTPRKPGQVRKGSPLFAEMTINAPKSLSVAAALHPKVSEALDAAQ RDAAQEIQRFLGQHSVTLARPRGAQEVLPIERMQTVAITHKTSRAGDPHRHIHFQIGTRV WAGSGAR >gi|294972587|gb|ADNU01000009.1| GENE 4 3229 - 3672 271 147 aa, chain - ## HITS:1 COG:RSc1849 KEGG:ns NR:ns ## COG: RSc1849 COG1846 # Protein_GI_number: 17546568 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 22 145 30 156 157 65 33.0 3e-11 MEQVIDATLHAIWEANRLLRDEGERMAASVGQTHARRMVLQTAGAGATVTDIARRLRLQR QSVQRVADQLVEEGFACYQDNPRHRRSKLLLTTPAGDDVLDRLAEVHDDWIREIGELAPS APWDEMRRGLEGLVDALKTKNPETQNE >gi|294972587|gb|ADNU01000009.1| GENE 5 3720 - 4709 646 329 aa, chain + ## HITS:1 COG:CAC0719 KEGG:ns NR:ns ## COG: CAC0719 COG0596 # Protein_GI_number: 15894007 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 16 309 12 330 381 125 28.0 1e-28 MTAYYQLLSGVLPNLDWAAGELRTRLRASRHPATASLVDGDYGLSHLVVGEAVTRWIDWL EPTERAAGAESHAMVQVDGIDLHVLRFSGEGVLPLLLVHGWPTSFLMFHRVIGGLRAVCS ELVLVSMPGFGTSPLPRASWSALDSSKLLLKMMEVLEFDRFAVHGEDWGSVVARAMGTLA PDRIAGVHVSAGLHGFLADGTAEDQAWRDLQRYAMNGSAYLRLQAERPDSLAFALADSPV GLLAWQLDKYSLWQAALGTDFGIGDDFIFANATLYWLTNSAATSMRLYATSRPDATPVFS PVPTAVSKFGVADFASHAVSDRHNNLVGW >gi|294972587|gb|ADNU01000009.1| GENE 6 4814 - 5533 418 239 aa, chain + ## HITS:1 COG:no KEGG:Franean1_4510 NR:ns ## KEGG: Franean1_4510 # Name: not_defined # Def: putative esterase # Organism: Frankia_EAN1pec # Pathway: not_defined # 4 238 6 244 245 102 32.0 2e-20 MNTPGPIVLVGGGGLGPWAWSRVTPLLQQRGLTVVTPQLRTTGNDETLPASVTLSDWIDD LAIEVSRLDDATLVAHSFAGYVAAGALSRVAQHLRSVIFLDAALPQPGASWFDVMGAQTE GFMRSIARDGATPWFTRDQLDQMYPDNGITDRDLAWLDEHVTPQPIGTYAQPAIEQPIPT LATGVRLHYVKCLRTHPPVAPDTSSTTGWTMSTIDSSHWPMVTAPEDVTRQIIEVVENP >gi|294972587|gb|ADNU01000009.1| GENE 7 5530 - 6072 215 180 aa, chain + ## HITS:1 COG:no KEGG:Rfer_0153 NR:ns ## KEGG: Rfer_0153 # Name: not_defined # Def: hypothetical protein # Organism: R.ferrireducens # Pathway: not_defined # 1 168 1 175 179 79 36.0 7e-14 MNYVALFRNLNLGHPGSPTATALVDAFGGPSVASCFQTNGTVVFDADDPEPLIGQARNTL TARGFHQSFATRSLTEIASLLNDAPEVDPAENVYRLMVSFFDTIDKPQISVPLRSPDGLV EVRGLYDSHAWSACWKPKNTAGNVTGFLESLLEVPVTTRTMATLERLARKYGAAGHGNAG >gi|294972587|gb|ADNU01000009.1| GENE 8 6705 - 7199 367 164 aa, chain + ## HITS:1 COG:no KEGG:AARI_03850 NR:ns ## KEGG: AARI_03850 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 7 160 144 301 308 99 41.0 4e-20 MSRIAGFHDAIRFAEREHLADYHPAFSVNCVTDDEDDPDDADRVRVAAALSAIVELFVST GWDAVLVANCVEHVAYRLADLTSRANAVEVLRRDRATPERLGIPSRSWTALLRIVLGHPD RKHAGTPTGDGILLRLLGEEPLDSLRCDTGLLAAIWAAKPRADA >gi|294972587|gb|ADNU01000009.1| GENE 9 7240 - 7500 68 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSADTACRSSAAHLSVMKATTAALGTPGMSVPPPPPERRGQARSGLPPGFDPVAWTREAC ERSGVSVGVTDTVALAKLRVLTCPEN >gi|294972587|gb|ADNU01000009.1| GENE 10 7523 - 7942 374 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394545|ref|ZP_06804767.1| ## NR: gi|295394545|ref|ZP_06804767.1| hypothetical protein HMPREF0183_0265 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0265 [Brevibacterium mcbrellneri ATCC 49030] # 1 139 1 139 139 209 100.0 8e-53 MITRLAATTLPTASPGEDAGVSAAMEQITAARQRMEDMARDYGAGLLSRTELHAAKTAAT ATITNAELVLGRSAKSSALKGIPIGDEQALRHAWEVEWSIPQKRAIIAALIDTLIVKPAE PGKTGARFRPERVELTFKA >gi|294972587|gb|ADNU01000009.1| GENE 11 7951 - 9006 714 351 aa, chain - ## HITS:1 COG:MT3573 KEGG:ns NR:ns ## COG: MT3573 COG1961 # Protein_GI_number: 15843063 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Mycobacterium tuberculosis CDC1551 # 12 312 2 296 463 159 37.0 8e-39 MDGTAASSGVEQVVVYLRISEDRTGAEAGVERQRQDCLELCSRLGISDPAIFMDNDISAY SGKKRPGYLDLLERVKLGPSRIVAWHVDRLYRRPRELEDLIDLVEAHPIRIETVKGGAFD LNTHEGRLMARQLVAIASYESGHKADRIRGANQQKAERGDWHGGAKYGYGIGGVLIPEEA AVFREMADRFLAGQSVRQITRWLNRDGGPTPPSKGKSRLNVWHESTVGSILCSARISGQR AYEPASKTTATWERRDRAILGPGNWEAIITPDETARIRAVFNHPDRRVGRSSKSLLAGLI TYAKCGNTLVSSGLHRGETSIGKRRFYRCLPSPVARSAADSSCPHTASRHW >gi|294972587|gb|ADNU01000009.1| GENE 12 9041 - 9487 135 148 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPQLQGRGLLPGVGEAVNIDQLGSIVTAVDQQAEHTAGIDGLELGVVTDQQHLRPRLLSS LRDPVEREGAGEGGFVNDDQLPGLEGRAGVLVGGPRLAVFSAAIPRSSASTCAATADGAN PTTDPAPCSASHARRKAFIAVVLSTCRV >gi|294972587|gb|ADNU01000009.1| GENE 13 9332 - 10756 812 474 aa, chain + ## HITS:1 COG:mll0964 KEGG:ns NR:ns ## COG: mll0964 COG0507 # Protein_GI_number: 13471082 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 1 239 469 701 1015 79 31.0 1e-14 MLLVGDYAQLQSVDAGGVFSLLIHGRDDAPELVDVHRFTHAWEKTASLELRHGRTLVIDT YLAHDRIYDGDAEAMTDAAYTAWRRDRQAGLATVLIAETRENVTALNVRTRADLILDGTL KPGPEITLSDGSATGVGDTIITRRNDRRLRNRHGWVCNGQTWTISQVRDDGLVTIRPPGA RFGNSIVLFADYVADHVGLGYAVTAHRAQGITTDTAHVLVEPTTTRENLYVAMTRGQESN RAYVILNRPDDHATAHPSDNPDAIARTVLYGVLQHSGAELSAHATITAEQDRWGSIAQLA AEYESIAAAAQHDRWTTLVRGSGLTIDQAQAVIDSDAFGALTAELRRVEANHHNVDTLLP RLIKARGFADADDITSVIHYRLAQATARPRRIGTRSPGTASHCRADSRSRRPHDPRHAAS PDRAPPPHRNPSRSSPRHRPPHARTMGYGTRSDARRRLGAASVATPRSGCGRLP >gi|294972587|gb|ADNU01000009.1| GENE 14 10569 - 10925 191 118 aa, chain + ## HITS:1 COG:no KEGG:Mlut_00370 NR:ns ## KEGG: Mlut_00370 # Name: not_defined # Def: conjugative relaxase domain protein, TrwC/TraI family # Organism: M.luteus # Pathway: not_defined # 1 118 1056 1174 1174 91 51.0 1e-17 MTPDMQQALTGRRHLIETRAEAVLDIALHTQEPWAMALGPMPAGGWERHRWRRRALVVDA YRDRYQIIDPDPLGAQPEGTAQKIDRARAETALRTLTRSTIHDERRRAAAQVSRHLDL >gi|294972587|gb|ADNU01000009.1| GENE 15 11327 - 13330 589 667 aa, chain - ## HITS:1 COG:PAE2903 KEGG:ns NR:ns ## COG: PAE2903 COG0433 # Protein_GI_number: 18313675 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pyrobaculum aerophilum # 432 638 302 503 608 103 31.0 1e-21 MATSDAQRRRLGTIIDVSAERFRVEMAESADGYTLVGFDGQHYVARIGSLVLIPLTNSYV VAEVTGLQERPDPSAISSASKSLDDVMHASSRQLTLAPLGTLPFDETHGFSFGVSVFPPL YADVLHVENRDLDRILNVVNQEVEIANTTPPATKLNTLTVGTSAVFNDYDVKVRINEFFG AHSAILGNTGSGKSCTISSLLQEALGKTSLAPAGGSTFVLFDTNGEYRRAVSKIPAPIQR TYARIEHAHAPALFPATPYDDREQLDSFVLPHWLLSLEEWELLLQASDRVQRPILRTALG LTSLFASESADQLAALRDHILASCLLFLLMDSENATAANSRIGGLLNVYELSAVPAHEIT SRLTVSYGSFDQRGLKQVEAELKGLLIPNAEIPSYENHPFRFSDLTTALEIAILYEESHG NRRVRDNCSTLLTRVKSLGMRDEFSFLRSDPYASRANSITSESFTDAILGIDRDSSCPAK QSQVYVLDLSAVGDEVVEVVSSVITRLLFDRLRQSDVRNSFPVNLILEEAHRYVPRQSVP ASTLDATRIFERVAKEGRKYGLFLMLSSQRPSELSGTVLSQCSNYVVHRIQNPEDLQHIR RMTPFISESVLNRLASLPKQFALVFGTSVSIPTTFKVRTAAPLPQSDDSDVSLYWYQSPE KVTDIPL >gi|294972587|gb|ADNU01000009.1| GENE 16 13317 - 14417 437 366 aa, chain - ## HITS:1 COG:no KEGG:Rsph17029_3199 NR:ns ## KEGG: Rsph17029_3199 # Name: not_defined # Def: hypothetical protein # Organism: R.sphaeroides_ATCC17029 # Pathway: not_defined # 27 365 105 438 442 357 48.0 7e-97 MGPMAQGLLAEENTGTAARYGLTDEIKDSLTADLGIDLASEAYAWNLERLMEVLFGFQFA LNQTENPSLAEAKKAVDSAIDSIKKYVFDTCNEGQHKYSATSVLKLYQTFYRKLSQRSRS LPRPTVATTNYDLFNEIAMDRIGVPYINGFLGSIEKRFNPASFRYTIAQRLDLTSQRWTS LDNLVYFLKLHGSLNWHAVDDGLFPVEERPISESSDGKAMLIYPTPAKQNASFAAPYSDI FREFQTKVVQEQSALVTVGYGFGDEHVNNIIYQALTIPTFRLLVFAKPEFDARISNKHVK TLQELNDPRVWIVGTEKTNATWKAHYFKEFVEDIMPVGDVDPAEKAIENVMGMFANIKKD DNDGDQ >gi|294972587|gb|ADNU01000009.1| GENE 17 15086 - 15289 230 67 aa, chain - ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 8 60 154 206 219 57 52.0 8e-09 MRALLDLLTPRERDIARLIADGDSNAEIAERLVIEPASVRRNVRRILTKLNLRDRVQIAV HWHKAGL >gi|294972587|gb|ADNU01000009.1| GENE 18 15475 - 15906 260 143 aa, chain - ## HITS:1 COG:no KEGG:BBMN68_495 NR:ns ## KEGG: BBMN68_495 # Name: not_defined # Def: histidine kinase, dimerization and phosphoacceptor region # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 13 143 277 409 409 81 39.0 1e-14 MEDIEPLAREGLDEIRRAVSLLGRLEDPVVVTEISRRPDGTPVADLAFSIVREALTNAVR RTEPLERASIAIDHHTTKGTRITIRSHGHSRKADECEPGNGLQRLSHRVTSQGGTFNAGS GEPDEWIVDAKLPPAPNEENHHA >gi|294972587|gb|ADNU01000009.1| GENE 19 15949 - 16206 91 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGERDDGGQVVPDAVVNLGGDARARYGLIPFGSDSTGALGIMVGLLGGCLPAAHAANPAP DQDADRCHAELTGELVNDRRRGRQP >gi|294972587|gb|ADNU01000009.1| GENE 20 16084 - 16377 191 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394553|ref|ZP_06804775.1| ## NR: gi|295394553|ref|ZP_06804775.1| DedA family membrane protein [Brevibacterium mcbrellneri ATCC 49030] DedA family membrane protein [Brevibacterium mcbrellneri ATCC 49030] # 1 97 1 97 97 127 100.0 2e-28 MLALAVIEAAYLAASAIGMHDYVAFPLLFALFRVVADTGLASVVGSVTPTGAGMLASSWL ATSTTVVDEFTGQLSVAAVSILVGGGVRSVRGWQTAT >gi|294972587|gb|ADNU01000009.1| GENE 21 16672 - 17355 394 227 aa, chain - ## HITS:1 COG:no KEGG:Blon_0467 NR:ns ## KEGG: Blon_0467 # Name: not_defined # Def: protein of unknown function DUF214 # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 225 251 472 474 111 36.0 2e-23 MVNAATWVGGLSAAAVYVTGPALVHVALSVAHQVLPLFRVPVGQVTARSARAQAAMNANT IAPLAVAIGLGGVIFTATGSYLDVMTRAGFPLEDPNLTDVALLSGLFCVMAIATSMAVIA VSGRDQVREHTTLRSSGMSPMQVSRLVAWQSVCLALSAAGMGLLPVALVAWLVVSYSLAL VGSMALSLSWLGLAAGFLLCWFVLWAVQFSQAMPWLRREAAVGLRHA >gi|294972587|gb|ADNU01000009.1| GENE 22 17675 - 18091 209 138 aa, chain - ## HITS:1 COG:no KEGG:Blon_0467 NR:ns ## KEGG: Blon_0467 # Name: not_defined # Def: protein of unknown function DUF214 # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 138 1 138 474 124 60.0 1e-27 MLRHVVRTLRSDWFGWAPSMGVVAAVMVLVTACTNQFLWTSSTEFLDAARRSGLDGGEFA MVSMTIYTVIALLAVCSLTVVGSATVERTRITFAQWRLMGASPRQVRACLWALVGLASFV GAVPGVVLGSVLSSLVVP >gi|294972587|gb|ADNU01000009.1| GENE 23 18103 - 18312 117 69 aa, chain - ## HITS:1 COG:no KEGG:Blon_0468 NR:ns ## KEGG: Blon_0468 # Name: not_defined # Def: ABC transporter related # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 65 187 251 267 78 64.0 1e-13 MDSANSRLVLEVLRELADAGITVVMVTHDADAAVRADRVVFMRDGSITVVGSGLDAGKVL AGMRQPVRR >gi|294972587|gb|ADNU01000009.1| GENE 24 18325 - 18831 312 168 aa, chain - ## HITS:1 COG:Cgl2501 KEGG:ns NR:ns ## COG: Cgl2501 COG1136 # Protein_GI_number: 19553751 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Corynebacterium glutamicum # 25 168 65 208 284 123 39.0 2e-28 MQANNVSAVSVVAVGRQIASGDWVLRKCSVTFSPRSLTAIVGASGAGKTSLMYCLSGLDA PTAGQVLVEGHDVYAMSRQARATLLRSRVGFVFQQYNLVSYLSVEDNVALPLPLAGRQVD RQVLTRLLERFGLAAKAGTAAGALSGGEQQRVALCRVLLLRPAVVFAD >gi|294972587|gb|ADNU01000009.1| GENE 25 19047 - 20153 542 368 aa, chain - ## HITS:1 COG:MT1869 KEGG:ns NR:ns ## COG: MT1869 COG0653 # Protein_GI_number: 15841291 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 4 345 446 796 808 286 46.0 5e-77 MCSQPDQLFLAVAQRDDAAAATVYAAHSSGRPVIVGTRSVEQSEQFAQLLAAQGVTATVL NAKNDAEVAGIIAQAGQHGAVTVSTQMAGRGVDIQLGDGVTELGGLLVIVIGRYNSARLD RLLRGRAGRQGDPGASVFFTSFEDPVVTEQLSPNRLPHVVADDGLVEDPEFHRLYEHAQR VAAGKLLELRRTTRKYQTITDHHRAVLLPTRERILTDPTAIDQYLTLVWPDHPEHVQLWA GSERREMATDVALFFLDRAWADHLNLLAETREGIHLRALGRQNPLDEFNRIAIGDFENLA SHALSSVRDTLAQAPDDATDLVALGLRRPSSTWTYIVTDNPFGSEADRLVAFIGKTIRGN RQPNITYH >gi|294972587|gb|ADNU01000009.1| GENE 26 20107 - 20472 221 121 aa, chain - ## HITS:1 COG:MT1869 KEGG:ns NR:ns ## COG: MT1869 COG0653 # Protein_GI_number: 15841291 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 1 106 335 440 808 106 49.0 9e-24 MALHAHALITRDKHYIVADGEVRLVNDARGRVAERQRWPDGLQSAVEHKEGLQVSMQAEI LDQILVETVAREYSLITGMSGTAVEAAERLAEDLELKTRVVPTNRPCVLAARPAVPRRSA A Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:49:20 2011 Seq name: gi|294972584|gb|ADNU01000010.1| Brevibacterium mcbrellneri ATCC 49030 contig00010, whole genome shotgun sequence Length of sequence - 570 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 70 - 285 99 ## 2 1 Op 2 . + CDS 365 - 569 114 ## gi|295394565|ref|ZP_06804786.1| DAACS family transporter Predicted protein(s) >gi|294972584|gb|ADNU01000010.1| GENE 1 70 - 285 99 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLRVSVCVVVMWGHLLVYPHSICVRMRGSRILFVLFLFAFEQVVSRTHTKHGFQSHRMA HCFTRMIKLDG >gi|294972584|gb|ADNU01000010.1| GENE 2 365 - 569 114 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394565|ref|ZP_06804786.1| ## NR: gi|295394565|ref|ZP_06804786.1| DAACS family transporter [Brevibacterium mcbrellneri ATCC 49030] DAACS family transporter [Brevibacterium mcbrellneri ATCC 49030] # 1 68 1 68 68 114 100.0 2e-24 MFTAHTSRGFEGVKATTLYFAQQNNLGSDSCSSWEGQTDAKPNETAPGEQRNDAKRAKLR NITRRIAR Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:49:33 2011 Seq name: gi|294972576|gb|ADNU01000011.1| Brevibacterium mcbrellneri ATCC 49030 contig00012, whole genome shotgun sequence Length of sequence - 7483 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 3, operones - 1 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 71 - 457 162 ## - Term 752 - 793 10.0 2 2 Op 1 6/0.000 - CDS 884 - 1624 197 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 3 2 Op 2 10/0.000 - CDS 1709 - 2863 1372 ## COG1960 Acyl-CoA dehydrogenases 4 2 Op 3 5/0.000 - CDS 2866 - 3651 760 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 5 2 Op 4 4/0.000 - CDS 3792 - 5324 1304 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 6 2 Op 5 . - CDS 5367 - 6197 814 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 6227 - 6286 2.7 + Prom 6218 - 6277 2.5 7 3 Tu 1 . + CDS 6298 - 6903 435 ## COG1309 Transcriptional regulator Predicted protein(s) >gi|294972576|gb|ADNU01000011.1| GENE 1 71 - 457 162 128 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLRVWVCVVVMWGHLLVWFYSICVRMRGSRILFVLFLFAFERVFSRTHEETYWTVNAHH TGQQSHQVANQHEKAQQLLTSPQPGNWPQPSLVYADAPVTRPHAPTYASSAAQDNQAHES SSSPTAYA >gi|294972576|gb|ADNU01000011.1| GENE 2 884 - 1624 197 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 240 4 239 242 80 30 4e-15 MQFANKTFIVTGGGSGLGAATTQALIERGARVFIADLKGEAPSGAEFVETDVTSPDSVSA LVDKANADGTLSGLVNCAGIGTAQKTVSSKGPHDLESFAKVVNVNLIGTFNAIRLASWAM SQNEPGEDGERGVIVNTASVAAFEGQIGQAAYSASKGGVAGITLPIARDLASVGIRVVTI APGLFLTPMLAGLPEAAQESLGKQVPFPQRLGQPSEYANLVTHIVENRMLNGEVIRLDGA IRMAPR >gi|294972576|gb|ADNU01000011.1| GENE 3 1709 - 2863 1372 384 aa, chain - ## HITS:1 COG:mlr5626 KEGG:ns NR:ns ## COG: mlr5626 COG1960 # Protein_GI_number: 13474683 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mesorhizobium loti # 9 384 33 408 408 425 54.0 1e-119 MILDGYRGAWENEETDDLRSLTRNFLEKEAKPNLARWAEEHKIDREFWNKAGELGLLCVS IPEEYGGGGGTFAHEAVVLQEQGYIGDAAWGYAVHSTIVAHYINAIGTEEQKKRWLPGLA SGELVGAIAMTEPGTGSDLQAVKTKAVLDGGEYVINGAKTFISNGTHADIVIIVARTNDQ PGGKGLSLIVAEVNDLPGFSRGRVLDKVGQRGQDTRELFFEDMRVPAENLLGGVEGKGFI HLMQQLPQERLALAVTGVTTAEYAVRLTVDYAKEREAFGRPILGFQNTKFVLAECATDTF AARTFVDHLVSQHIEGKLTTEQASAGKYWATDIQNTVIDRCVQVFGGYGYMLEYPIARMY ADARVQKIYGGTNEIMKDLISRGL >gi|294972576|gb|ADNU01000011.1| GENE 4 2866 - 3651 760 261 aa, chain - ## HITS:1 COG:AGc562 KEGG:ns NR:ns ## COG: AGc562 COG1024 # Protein_GI_number: 15887672 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 259 36 286 288 206 48.0 3e-53 MSEQREPLVRTEDRGPVRIITLDRPKALNALSGDLIDDLAVALSDAESTDSVRAIVLTGS DKAFCAGADIGEIARMQDSKPLDPLMIDRLFGALDAVLKPTIAAVRGLAFGGGCELTLAC DIAIAGESAQFGVPEVKLGVLPGGGGTQRLISAVGKAKAMRMLLTGEPVNATWAESAGLV AEVVPDDQVVEAAVKIGNAIAANAPLAVRLTKDSALASLETPLSAGLAHERRNFLLLLGT EDAQEGTSAFIERRRPEFKGV >gi|294972576|gb|ADNU01000011.1| GENE 5 3792 - 5324 1304 510 aa, chain - ## HITS:1 COG:Cgl0284 KEGG:ns NR:ns ## COG: Cgl0284 COG0318 # Protein_GI_number: 19551534 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 9 504 12 506 512 292 36.0 1e-78 MATLPLVLRRTANTHPDQPAITFESTTLTYRELDDRVDQFAADLIERGVRKGDRLVIVAG NSDVFAYAVLGGLRAGAIVAPVNPKSAGAEIEHFVTDADVHSIIFDALCAPAVKAWADAF PETAAKVNALSLGAAEFGDNLLESALQRPATPVEIGLEEDDDCLIIYTSGTTGKPKGALF DHHRVLWVGVNTIGGVGLRMLDRYLIVAPLYHSAALNLLFFPALMMGAHQVIHSGFDPEA VLSEIDKTKINVFFGVPTMFAFMLRSPNLAKLDLSSLRVAFYGAAPMPGSVAERLFDVLP QTEIIQLCGQTEGGPGGIILLHDEVKAKPSASGRSAILNTEVRVVDAEGNDVRPGEVGEM IMRGESMMKEYWRRPEATAQTVIDGWVHTGDLAHVDEEGYITLVDRLKDMIITGGHNVYS AEVENALAAYPEITDIAIVSRPHPDFGETVVAVVTPAEGGNPTLEGLREFAEPLLTHYKI PRELIIEDIPRNPSGKIQKHKLREKIAREQ >gi|294972576|gb|ADNU01000011.1| GENE 6 5367 - 6197 814 276 aa, chain - ## HITS:1 COG:DR1717 KEGG:ns NR:ns ## COG: DR1717 COG1804 # Protein_GI_number: 15806720 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Deinococcus radiodurans # 4 271 3 267 274 148 46.0 1e-35 MNQQPLSGVTVITLAVNLPGPLAAARLTNLGARVIKVEPPIGDPLSVYVTDYYKELAAGQ EVVTINLKSPEGVQQFDQLASEADILLTAMRPRAAKALGIPDTVDKYGLVHVEIVGFAGD RADIPGHDLTYQAAHKTLIPGTMPTVPVADVLGGEHAALQALAGLREKENRDAEEIGGIV KRVVLDEAAQWAAGPARHGLTGPGTRLGGAVPEYRTYATQDGHIAVACLEPHFAKALAER LGSTHEELEAAFASQPTAHWVEIAHTHDLPIEPIAV >gi|294972576|gb|ADNU01000011.1| GENE 7 6298 - 6903 435 201 aa, chain + ## HITS:1 COG:MT1257 KEGG:ns NR:ns ## COG: MT1257 COG1309 # Protein_GI_number: 15840663 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 10 121 2 106 212 65 38.0 5e-11 METEAESHGQNSDLTSRARIRNAGLHQFATSGFAGTPMRAIAAEAGVTIGLISHHFGSKE GLKEAVESWIVEQFANAIARADAQAGGSVASAASRDTSVAEMMQENPLIVAYLRRDLLEE GGTHALITRLSHLSGESIDSLRDHGKASQDRNRVEQVVNVMVRQLGKLFLQPLIDQIVLS FPEKEQPEQTPELHVTVTTQD Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:50:15 2011 Seq name: gi|294972467|gb|ADNU01000012.1| Brevibacterium mcbrellneri ATCC 49030 contig00013, whole genome shotgun sequence Length of sequence - 115815 bp Number of predicted genes - 108, with homology - 105 Number of transcription units - 53, operones - 23 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 487 165 ## gi|295394702|ref|ZP_06804918.1| conserved hypothetical protein 2 1 Op 2 . - CDS 387 - 647 312 ## gi|295394702|ref|ZP_06804918.1| conserved hypothetical protein - Prom 667 - 726 3.6 - Term 1122 - 1161 2.3 3 2 Op 1 . - CDS 1241 - 1462 279 ## gi|295394577|ref|ZP_06804796.1| conserved hypothetical protein 4 2 Op 2 . - CDS 1459 - 1767 265 ## COG0640 Predicted transcriptional regulators - Prom 1798 - 1857 3.5 5 3 Tu 1 . - CDS 1866 - 2369 262 ## cauri_1464 hypothetical protein - Term 2850 - 2890 5.0 6 4 Tu 1 . - CDS 2913 - 3092 101 ## - Prom 3234 - 3293 4.5 + Prom 2934 - 2993 1.9 7 5 Tu 1 . + CDS 3022 - 3531 339 ## gi|295394580|ref|ZP_06804799.1| conserved hypothetical protein - Term 3334 - 3374 -0.9 8 6 Tu 1 . - CDS 3451 - 4383 844 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 9 7 Op 1 2/0.273 + CDS 4435 - 5526 1090 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 10 7 Op 2 . + CDS 5523 - 6269 723 ## COG1611 Predicted Rossmann fold nucleotide-binding protein 11 7 Op 3 . + CDS 6272 - 6628 278 ## gi|295394584|ref|ZP_06804803.1| conserved hypothetical protein 12 7 Op 4 . + CDS 6655 - 7791 883 ## Arth_2798 integral membrane protein + Term 7796 - 7847 22.0 - Term 7784 - 7835 22.0 13 8 Op 1 . - CDS 7887 - 9668 1565 ## COG4716 Myosin-crossreactive antigen 14 8 Op 2 . - CDS 9737 - 10366 534 ## RER_56670 TetR family transcriptional regulator - Prom 10437 - 10496 2.6 + Prom 10413 - 10472 3.6 15 9 Tu 1 . + CDS 10499 - 10669 295 ## Ksed_19420 hypothetical protein + Term 10695 - 10727 5.0 16 10 Tu 1 . - CDS 10729 - 11361 554 ## COG4122 Predicted O-methyltransferase - Prom 11381 - 11440 3.5 17 11 Tu 1 . + CDS 11406 - 11807 405 ## AARI_21630 putative twin-arginine translocation protein TatB 18 12 Tu 1 . - CDS 11804 - 12991 1037 ## COG0489 ATPases involved in chromosome partitioning + Prom 12783 - 12842 1.9 19 13 Tu 1 . + CDS 13007 - 13462 624 ## Bcav_2912 hypothetical protein - Term 13355 - 13408 0.8 20 14 Op 1 . - CDS 13459 - 14514 767 ## COG3191 L-aminopeptidase/D-esterase 21 14 Op 2 . - CDS 14498 - 16021 1482 ## COG0006 Xaa-Pro aminopeptidase 22 15 Tu 1 . + CDS 16100 - 16939 603 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) + Term 17007 - 17043 3.1 - Term 16863 - 16901 -0.9 23 16 Tu 1 . - CDS 16957 - 18336 1209 ## COG0513 Superfamily II DNA and RNA helicases 24 17 Tu 1 . + CDS 18393 - 19004 597 ## RSal33209_1205 hypothetical protein + Term 19141 - 19178 -0.1 - Term 18931 - 18978 2.0 25 18 Op 1 . - CDS 19054 - 19278 264 ## HMPREF0733_10117 ATP-binding protein 26 18 Op 2 . - CDS 19304 - 19939 462 ## COG1309 Transcriptional regulator + Prom 19902 - 19961 1.5 27 19 Op 1 5/0.000 + CDS 20001 - 23126 1587 ## COG0210 Superfamily I DNA and RNA helicases 28 19 Op 2 . + CDS 23123 - 26434 1925 ## COG0210 Superfamily I DNA and RNA helicases + Term 26499 - 26561 -1.0 29 20 Tu 1 . - CDS 26464 - 27540 820 ## Krad_1175 aminoglycoside phosphotransferase 30 21 Op 1 1/0.273 + CDS 27688 - 28668 548 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 31 21 Op 2 . + CDS 28665 - 30701 897 ## COG0210 Superfamily I DNA and RNA helicases - Term 30430 - 30462 -0.2 32 22 Tu 1 . - CDS 30662 - 31558 534 ## gi|295394605|ref|ZP_06804824.1| conserved hypothetical protein - Prom 31796 - 31855 3.2 + Prom 31841 - 31900 2.6 33 23 Tu 1 . + CDS 32077 - 32625 289 ## COG1451 Predicted metal-dependent hydrolase 34 24 Op 1 . - CDS 32591 - 33142 385 ## Bcav_0711 NUDIX hydrolase 35 24 Op 2 . - CDS 33139 - 34449 1070 ## COG5282 Uncharacterized conserved protein + Prom 34441 - 34500 3.4 36 25 Op 1 3/0.182 + CDS 34633 - 35709 1048 ## COG3480 Predicted secreted protein containing a PDZ domain 37 25 Op 2 . + CDS 35764 - 38694 2215 ## COG1615 Uncharacterized conserved protein + Term 38901 - 38942 11.1 + TRNA 38817 - 38893 84.1 # Met CAT 0 0 + Prom 38819 - 38878 79.8 38 26 Op 1 27/0.000 + CDS 39065 - 41065 1828 ## COG0286 Type I restriction-modification system methyltransferase subunit 39 26 Op 2 11/0.000 + CDS 41058 - 42224 309 ## COG0732 Restriction endonuclease S subunits 40 26 Op 3 . + CDS 42226 - 45765 2888 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 41 26 Op 4 . + CDS 45842 - 46318 181 ## PROTEIN SUPPORTED gi|227427067|ref|ZP_03910130.1| acetyltransferase, ribosomal protein N-acetylase 42 26 Op 5 1/0.273 + CDS 46355 - 46627 324 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 43 26 Op 6 . + CDS 46707 - 47489 683 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase + Term 47578 - 47626 9.8 - Term 47490 - 47551 21.4 44 27 Op 1 . - CDS 47556 - 48782 875 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 45 27 Op 2 . - CDS 48779 - 49552 828 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 46 27 Op 3 4/0.091 - CDS 49640 - 50656 496 ## COG1162 Predicted GTPases 47 27 Op 4 . - CDS 50653 - 51930 856 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 48 27 Op 5 . - CDS 51933 - 52448 532 ## COG2259 Predicted membrane protein 49 28 Op 1 . + CDS 52574 - 53203 735 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 50 28 Op 2 . + CDS 53200 - 53475 256 ## gi|295394624|ref|ZP_06804843.1| protein family anti-sigma factor + Term 53518 - 53571 10.4 - Term 53512 - 53553 11.1 51 29 Op 1 . - CDS 53565 - 53639 77 ## - Prom 53659 - 53718 3.7 52 29 Op 2 . - CDS 53725 - 54306 368 ## COG2755 Lysophospholipase L1 and related esterases 53 29 Op 3 . - CDS 54334 - 58062 3472 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 58170 - 58229 1.8 54 30 Tu 1 . + CDS 58173 - 59618 1117 ## COG0516 IMP dehydrogenase/GMP reductase + Term 59678 - 59702 -1.0 + Prom 59634 - 59693 2.1 55 31 Op 1 7/0.000 + CDS 59726 - 61033 1067 ## COG1253 Hemolysins and related proteins containing CBS domains 56 31 Op 2 . + CDS 61030 - 62088 791 ## COG1253 Hemolysins and related proteins containing CBS domains + Prom 62129 - 62188 4.6 57 32 Tu 1 . + CDS 62290 - 63189 757 ## COG1876 D-alanyl-D-alanine carboxypeptidase - Term 63206 - 63247 10.6 58 33 Op 1 11/0.000 - CDS 63261 - 64883 1168 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 59 33 Op 2 . - CDS 64917 - 66050 862 ## COG1960 Acyl-CoA dehydrogenases - Prom 66099 - 66158 3.9 + Prom 66083 - 66142 2.0 60 34 Op 1 . + CDS 66202 - 67980 1410 ## MMAR_4531 hypothetical protein 61 34 Op 2 2/0.273 + CDS 68000 - 69595 1413 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 62 34 Op 3 . + CDS 69613 - 71814 1450 ## COG0439 Biotin carboxylase 63 34 Op 4 . + CDS 71807 - 72640 569 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 72642 - 72684 0.4 64 35 Tu 1 . - CDS 72677 - 73333 293 ## REQ_36520 TetR family transcriptional regulator - Prom 73455 - 73514 78.0 + TRNA 73438 - 73513 84.6 # Arg CCG 0 0 65 36 Tu 1 . - CDS 73570 - 74088 543 ## gi|295394638|ref|ZP_06804857.1| hypothetical protein HMPREF0183_0355 - Term 74394 - 74437 13.4 66 37 Tu 1 . - CDS 74468 - 75688 1082 ## SGR_4305 putative serine protease - Prom 75848 - 75907 2.1 67 38 Op 1 . + CDS 75866 - 76021 144 ## gi|295394640|ref|ZP_06804859.1| conserved hypothetical protein 68 38 Op 2 . + CDS 76067 - 77278 769 ## gi|295394641|ref|ZP_06804860.1| conserved hypothetical protein 69 38 Op 3 . + CDS 77242 - 77976 622 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 70 38 Op 4 4/0.091 + CDS 78046 - 79686 1440 ## COG0018 Arginyl-tRNA synthetase 71 38 Op 5 3/0.182 + CDS 79767 - 81125 706 ## COG0019 Diaminopimelate decarboxylase 72 38 Op 6 11/0.000 + CDS 81122 - 82417 1122 ## COG0460 Homoserine dehydrogenase 73 38 Op 7 19/0.000 + CDS 82430 - 83503 1099 ## COG0498 Threonine synthase 74 38 Op 8 3/0.182 + CDS 83505 - 84428 619 ## COG0083 Homoserine kinase + Prom 84526 - 84585 3.8 75 39 Op 1 1/0.273 + CDS 84680 - 86515 1567 ## COG1158 Transcription termination factor 76 39 Op 2 32/0.000 + CDS 86515 - 87594 910 ## COG0216 Protein chain release factor A 77 39 Op 3 10/0.000 + CDS 87566 - 88489 238 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 78 39 Op 4 4/0.091 + CDS 88473 - 89129 537 ## COG0009 Putative translation factor (SUA5) 79 39 Op 5 . + CDS 89133 - 90242 748 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 80 39 Op 6 . + CDS 90239 - 90673 478 ## CE1308 hypothetical protein 81 40 Op 1 40/0.000 + CDS 90901 - 91692 746 ## COG0356 F0F1-type ATP synthase, subunit a 82 40 Op 2 37/0.000 + CDS 91781 - 92014 411 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 83 40 Op 3 38/0.000 + CDS 92036 - 92590 669 ## COG0711 F0F1-type ATP synthase, subunit b 84 40 Op 4 41/0.000 + CDS 92590 - 93396 727 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 85 40 Op 5 42/0.000 + CDS 93473 - 95107 1534 ## COG0056 F0F1-type ATP synthase, alpha subunit 86 40 Op 6 42/0.000 + CDS 95139 - 96074 805 ## COG0224 F0F1-type ATP synthase, gamma subunit 87 40 Op 7 42/0.000 + CDS 96103 - 97554 1670 ## COG0055 F0F1-type ATP synthase, beta subunit 88 40 Op 8 . + CDS 97558 - 97815 356 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 89 40 Op 9 . + CDS 97837 - 98304 295 ## SCAB_28741 hypothetical protein 90 40 Op 10 . + CDS 98388 - 99584 984 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 99709 - 99748 3.0 91 41 Tu 1 . - CDS 99632 - 100300 688 ## COG1637 Predicted nuclease of the RecB family 92 42 Tu 1 . + CDS 100357 - 100659 171 ## Krad_1276 ATP/GTP-binding protein - Term 100596 - 100646 1.1 93 43 Tu 1 . - CDS 100773 - 102239 1577 ## Tcur_3894 hypothetical protein - Prom 102274 - 102333 3.1 94 44 Op 1 . + CDS 102429 - 103607 1460 ## COG0183 Acetyl-CoA acetyltransferase 95 44 Op 2 . + CDS 103607 - 103930 270 ## COG0011 Uncharacterized conserved protein 96 44 Op 3 . + CDS 103955 - 104662 549 ## AARI_03680 site-specific recombinase + Term 104702 - 104729 -0.8 97 45 Tu 1 . - CDS 104546 - 105748 795 ## COG4335 DNA alkylation repair enzyme 98 46 Op 1 . - CDS 105986 - 107356 1001 ## COG0477 Permeases of the major facilitator superfamily 99 46 Op 2 . - CDS 107405 - 108064 473 ## COG0223 Methionyl-tRNA formyltransferase 100 46 Op 3 . - CDS 108061 - 108939 794 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 101 47 Tu 1 . + CDS 109003 - 109740 273 ## COG0640 Predicted transcriptional regulators - Term 109738 - 109779 2.0 102 48 Tu 1 . - CDS 109788 - 110366 397 ## Ksed_06750 hypothetical protein 103 49 Tu 1 . - CDS 110786 - 111019 57 ## 104 50 Tu 1 . - CDS 111460 - 112965 1347 ## COG0557 Exoribonuclease R 105 51 Tu 1 . - CDS 113283 - 113582 233 ## gi|295394679|ref|ZP_06804898.1| conserved hypothetical protein 106 52 Tu 1 . + CDS 114010 - 114261 311 ## COG0011 Uncharacterized conserved protein + Term 114354 - 114400 4.4 107 53 Op 1 . - CDS 114484 - 114762 336 ## gi|295394681|ref|ZP_06804900.1| conserved hypothetical protein 108 53 Op 2 . - CDS 114755 - 115333 265 ## COG2357 Uncharacterized protein conserved in bacteria - Prom 115513 - 115572 2.4 Predicted protein(s) >gi|294972467|gb|ADNU01000012.1| GENE 1 1 - 487 165 162 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394702|ref|ZP_06804918.1| ## NR: gi|295394702|ref|ZP_06804918.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 37 162 61 185 741 169 72.0 9e-41 MISLTACTQCSPPTRVQAHWLLTGKQDKAPTRGKVSHSASGSSSVFGPVAVASQAGAGVV SAGGPRATVGVDDVVACVALPSGEVCTVASVERVPDELPTPTEGVLARVLDCTRAQVVTQ VRKIMTAVVLMPKLWSLAKQGVIGFDRVLYTASRVGRAGVCI >gi|294972467|gb|ADNU01000012.1| GENE 2 387 - 647 312 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394702|ref|ZP_06804918.1| ## NR: gi|295394702|ref|ZP_06804918.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 86 1 85 741 133 81.0 3e-30 MTTTDHHVRNDMYDGPAVELFETVKTTTRIMDEARVKQAEAVAALISAHVTPLDDFTDGM HAVFTSNPGTGPLVTNGKAGQSSNAG >gi|294972467|gb|ADNU01000012.1| GENE 3 1241 - 1462 279 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394577|ref|ZP_06804796.1| ## NR: gi|295394577|ref|ZP_06804796.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 73 1 73 73 100 100.0 3e-20 MTLTATVFLIILAAALPLAIFVVLTVWVVRTVTSARRETATAIDGSNQLIVEHLRNITER LDRIEAQLSEIPE >gi|294972467|gb|ADNU01000012.1| GENE 4 1459 - 1767 265 102 aa, chain - ## HITS:1 COG:PAB2328 KEGG:ns NR:ns ## COG: PAB2328 COG0640 # Protein_GI_number: 14520252 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pyrococcus abyssi # 6 92 11 98 101 60 39.0 7e-10 MDAARLAQMLSALGSEPRLRIIASLETESTHVSELARRLGMSRPLLYQHLNRLEAAGLIE SGLEQLGESRVRKHYWVAPFQLEVTPDHIRHLINQEQKRESS >gi|294972467|gb|ADNU01000012.1| GENE 5 1866 - 2369 262 167 aa, chain - ## HITS:1 COG:no KEGG:cauri_1464 NR:ns ## KEGG: cauri_1464 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 2 144 11 141 382 68 33.0 7e-11 MSTPYTQPGQLIANIPGILGFYPTNCVVVVTLCTTLNDETSCAINPHEVALIGPVLRADF DRVGDLDRAVAALDAQASITSLFAVIITDDPDSGEALQAQELLFCAAGADGTALVDACWH VSEIATGAAYRLLFGTTAGQGTRPHEVDPSRTRRRCRPARSPTGHPG >gi|294972467|gb|ADNU01000012.1| GENE 6 2913 - 3092 101 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHAIIPAAMDTSRQPIATHLDVFIFVCTPLREEFVVFTLSLLECQDVLGVCLFSYTGAR >gi|294972467|gb|ADNU01000012.1| GENE 7 3022 - 3531 339 169 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394580|ref|ZP_06804799.1| ## NR: gi|295394580|ref|ZP_06804799.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 169 1 169 169 263 100.0 4e-69 MKTSKWVAIGCLLVSIAAGIIACTFHLAVWTGPQGTPLRLLDDINALTVLILIALFVLPA IGTLVALTYKKPLIPAILAAASTLLLLVVTLTLAEVVTNGILMWDGQTPDGTPIGGMETT RPATGYFALVCASILQLAATVFFLVQVRVERNSRGARKGLDDTGLGVSA >gi|294972467|gb|ADNU01000012.1| GENE 8 3451 - 4383 844 310 aa, chain - ## HITS:1 COG:Cgl1082 KEGG:ns NR:ns ## COG: Cgl1082 COG2171 # Protein_GI_number: 19552332 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Corynebacterium glutamicum # 6 310 5 295 297 322 58.0 6e-88 MSSYISATGVATKYQDTTLAVWYPAPVLEDTEEKAQSAAEVAVQDLDLSPLTGTDPVRGV SSEIVTVTVAVDEAPQGAEDAYVRLHALSHRLVRPNEVNVDGIFGQLENVVWTSRGACSP ENFEATRVRLQASGPVAVYGIDKFPRMTDFVVPSGVRIADADRVRMGAYLSPGTTVMHEG FINFNAGTLGAAMVEGRISQGVVVGDGSDIGGGASIMGTLSGGGKSKITIGTKCLLGANA GIGISLGDNCVVEAGLYVTAGTRVTLEDGTVVKASELSGQSDMLLRRNSESGIVEALPRT SGVSLNPDLH >gi|294972467|gb|ADNU01000012.1| GENE 9 4435 - 5526 1090 363 aa, chain + ## HITS:1 COG:MT1240 KEGG:ns NR:ns ## COG: MT1240 COG0624 # Protein_GI_number: 15840646 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 12 359 6 352 354 332 50.0 5e-91 MTDVSRLIPHLADPVALTRELIDIESVSGNEKPIADSVYAAVEHISDTGVELELLRDGDT IVARTHQNLGQRIVIAGHLDTVPIENNVPSTQSDDIIYGRGACDMKSGVAMQLCVAAALR QPAYDITWVFYDHEEVDASLNGLGRVARNHPDWLHGNFAILGEPSNAGIEGGCNGTIRVE VRSTGVRAHSARAFVGVNAIHGIAPALAQLADFEAPTITVDGLDYRESLSAVGITGGVAT NVIPDECVLTVNYRFAPSKTVDDAEQFLCHFFDGYDVTVTDVSPGARPGLNQDMAAEFVK TVGQEPKPKLGWTDVARFSELGIPAVNYGPGDPLYAHRADEQVPVSDIITAVEKLHAFLE ADS >gi|294972467|gb|ADNU01000012.1| GENE 10 5523 - 6269 723 248 aa, chain + ## HITS:1 COG:Cgl1086 KEGG:ns NR:ns ## COG: Cgl1086 COG1611 # Protein_GI_number: 19552336 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Corynebacterium glutamicum # 23 234 28 239 256 264 57.0 1e-70 MTDQNVYRKGPMYFKGRHVPTTTTDQRLLAPQSEVSWLHEDPWRVLRIQAEFVEGFSSLA ELGPAISLFGSARLREGTPEYQCARDVAAGIAKAGYAVITGGGPGLMEAGNRGATEVGGT SVGLGIELPFEQGMNQYVEIGMNFRYFFVRKTVFLKYSHGFVVLPGGFGTLDELFEALTM VQTKKMLAFPIVLVGKSYWSGLIEWIREQMLANQTISANDLDYVTVVDTAEEAVAAVTSG VGPHSKVN >gi|294972467|gb|ADNU01000012.1| GENE 11 6272 - 6628 278 118 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394584|ref|ZP_06804803.1| ## NR: gi|295394584|ref|ZP_06804803.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 118 1 118 118 186 100.0 5e-46 MWILLGIIAALAVLAVAVAGSMGLFDSPMTQNTDQLSELDETEDNPRFAPAMFGYSRNDV DAYLTRLQDRIRDLEGEPGAAGESSTSAKPGQLKKGSAEVSKSSRATSASVKKTARDK >gi|294972467|gb|ADNU01000012.1| GENE 12 6655 - 7791 883 378 aa, chain + ## HITS:1 COG:no KEGG:Arth_2798 NR:ns ## KEGG: Arth_2798 # Name: not_defined # Def: integral membrane protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 4 378 38 428 428 212 40.0 2e-53 MRTPVWVQALVVYALSRLLTLTIVASAAQHQGETPWNGPDGPSVIEYLNFWDAGWYERIW KDGYPAPLPLREDGSVAQNAWAFYPLYPWLVGALCSVTGLEFKTLAVITSVACAGAASVV ILYLFRKFADPAQALTGLAFFLVFPATATLMAGYAEAMAILFLAVALWLTAQRRYLLAIP VVVLMDVTRPIGVGFSFFMLIHLLWRWLGPEPYPKREVFTSWTLGVLSCVAALLHPAFAW WKTGQFDAYTSTESAWTGHSDLFIQWIDRADRMAGPLGIVLFLALLVVAGVILFTEPGKA MGHENRQFVLGYSVYLLLFFTPQTSTFRLLLPLFPLALVIARPSSWTLRWVVVVASALLQ IWWVTALWSLGGSFNSPP >gi|294972467|gb|ADNU01000012.1| GENE 13 7887 - 9668 1565 593 aa, chain - ## HITS:1 COG:SPy0470 KEGG:ns NR:ns ## COG: SPy0470 COG4716 # Protein_GI_number: 15674587 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Streptococcus pyogenes M1 GAS # 1 591 1 590 590 655 53.0 0 MEYNSGNYYAFARPRKPQGVDDKRAWFVGSGLASLAGAAFLVRDGQMAGNKITILEELDL PGGALDGIKKPEKGFVIRGGREMEDHFETLWDLFRSIPSLEIEGASVLDEFYWLNKDDPN YSKQRATVNRGQDAHTDGKFTLTEKAQKELMTLFFASREEVENKRINEVFSQDFLESNFW LYWRSMFAFEEWHSALEMKLYVHRFIHHIGGLPDFSALKFTKYNQYESLVLPLVAWLKDQ GVVFQYNTKVTDVDFDIDATTGRKQATRIHWESTADGVASDGVDLTEDDLLFMTIGSLTE NSSDGDHHTAAKLDEGPAPAWDFWRRIAAKDPSFGRPDVFGGHIPETKWESATVTTSDPR IHQHIEKIAKRDLFTGKVVTGGVVTVKDSSWLMSWTVNRQPHFKQQAPDEAVIWVYALLS DEPGDFTGKTIQESTGEEITQEWLYHIGVPEEEIKELAATGAQTVPVMMPYVTAFFMPRQ AGDRPDVVPEGSVNFAFIGQFAESKERDTIFTTEYSVRTPMEAVYTLLDIERPVPEVYNS TYDVRKMLSALNHLRDGKELKVPGGKLGHKMLMKRIKNTEISQLLAEYHIVEE >gi|294972467|gb|ADNU01000012.1| GENE 14 9737 - 10366 534 209 aa, chain - ## HITS:1 COG:no KEGG:RER_56670 NR:ns ## KEGG: RER_56670 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: R.erythropolis # Pathway: not_defined # 6 145 11 150 209 117 47.0 2e-25 MTELTVGRRVQNMRDKRERIFRAAHELFTERGFDRVTTQEISERADVATGTLFRYAASKS ELLLMVLNEEFRSALEHGEAVARKTEGISAQVQELIAPIMALAIKREPDSTVYQRELIFG SDEQPHRAESIALMARMESCIGDLLERAAQTRKISISDKALRAASAAIFGALTLAIARLS ARTHNPEDSVEDLNLQVEQIVTGTLELAT >gi|294972467|gb|ADNU01000012.1| GENE 15 10499 - 10669 295 56 aa, chain + ## HITS:1 COG:no KEGG:Ksed_19420 NR:ns ## KEGG: Ksed_19420 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 55 1 55 56 70 65.0 3e-11 MAAQKPRTGDGPLEVTKEGRGLVLRLPIEGGGRLVIEVSQEEAQNLAETLNEALGQ >gi|294972467|gb|ADNU01000012.1| GENE 16 10729 - 11361 554 210 aa, chain - ## HITS:1 COG:ML1075 KEGG:ns NR:ns ## COG: ML1075 COG4122 # Protein_GI_number: 15827525 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mycobacterium leprae # 6 208 14 223 224 122 38.0 5e-28 MRNLPAAAQFADRFHHSDAVIDAARSLASEFHCAPLGATSTHVLSMLTRLARPTSAIEVG TGTGVSAVTILSAMPPSGVLTTIDTDPQRQAVVPELFDVAGISRHRARMITGQSQNVLSR LAENSYDLVFLDTDPLNHLEIFPMAMSKLRAGGLIVVNNAMAAGAVANPADRSATTSATR RMLTYVSEVPNTERVLLPVDAGLLALIRAD >gi|294972467|gb|ADNU01000012.1| GENE 17 11406 - 11807 405 133 aa, chain + ## HITS:1 COG:no KEGG:AARI_21630 NR:ns ## KEGG: AARI_21630 # Name: tatB # Def: putative twin-arginine translocation protein TatB # Organism: A.arilaitensis # Pathway: Protein export [PATH:aai03060]; Bacterial secretion system [PATH:aai03070] # 6 133 5 134 134 111 49.0 1e-23 MDGMFGINGTEMIILIVLALIVVGPSRMPEYAKKLGEFVKTFRRKALDARRAVREDFGDE FDLDWQKLDPRQYDPRRIVREALAEEDGQQIQQGQQSQTATQTAVTVGPIERYMEQAKKR DRSKPAPFDSEAT >gi|294972467|gb|ADNU01000012.1| GENE 18 11804 - 12991 1037 395 aa, chain - ## HITS:1 COG:ML1080 KEGG:ns NR:ns ## COG: ML1080 COG0489 # Protein_GI_number: 15827530 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium leprae # 34 395 12 381 383 364 54.0 1e-100 MVVLPCRLNHPHLRHPQSGSRVKKTYEEVVVVDRDAVMKALGTVIDPELRVDIVTLGMVD TVKVDSGHVEVTVLLTIAGCPLKDTITRDTEQAVLAVDGVTEVTVHLGTMTPEQRAELRN KLKRSNPFKDSLTRIYAVASGKGGVGKSSVTANLAASMVQQGLKVGVIDADIYGFSIPGM FGITGQPTRVDDMILPRVAHGVKVMSIGMFIGGNQAIVWRGPMLHRALEQFLTDVHWGDL DVLFLDLPPGTGDIAISVAQLLPQSELLVVTTPQHAAAQVAQRAGSIAVQTSQKVAGVIE NMSHMIMPDGSTLDVFGSGGGEDVAQNLTDTLDYPVQVLGQVPLDPPVRIGGDEGTPAVI AHPESVASKVFSQMAHELSHRSRGLSGRSLGVTPS >gi|294972467|gb|ADNU01000012.1| GENE 19 13007 - 13462 624 151 aa, chain + ## HITS:1 COG:no KEGG:Bcav_2912 NR:ns ## KEGG: Bcav_2912 # Name: not_defined # Def: hypothetical protein # Organism: B.cavernae # Pathway: not_defined # 2 150 11 157 238 115 41.0 5e-25 MQPNVMPTGEVLGTYRSREEAQATISYLAENGFNVRALSIVGSDVRIVETVMGITSWAQA AGRGALTGAWLGLLFGLLMSFFSGEETLSSGGLLPGVIIGVGLGMLWGIVTRAIMGRKNK VIARPQVIANEFQLLCNPMQANEARALLSKR >gi|294972467|gb|ADNU01000012.1| GENE 20 13459 - 14514 767 351 aa, chain - ## HITS:1 COG:Cgl2463 KEGG:ns NR:ns ## COG: Cgl2463 COG3191 # Protein_GI_number: 19553713 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Corynebacterium glutamicum # 20 321 11 290 304 129 41.0 1e-29 MALAADFSLTLPAGVRMGCAEVPGGLSGTTVLLLPPGSTVGVDSRGGGPATHETNILAPG TLGYGADAVVLTGGSALGLSAARGVQDTLATSSIGCEPLPGIRVPIVPAAAVFDLGRGAS HTPDADTGAAATLAARNSEGACRGSLGAGLGAWSGRGFARGGTGVASVSTSEGWRVTAVV TANPMGSIFDARGRLHAAGVLAEYGIEVPAVPVAVLNEQVERARALNASATNTTIACLLT DAPLTDAQITRVAATAHAGLSRAIYPSHTLFDGDTVFAASVPAADADASKLNDYTSPALT HVGAAAADAMSLACIDAVLSAGAQEDWGPLAIPAVRQFAPETVSAWEVARN >gi|294972467|gb|ADNU01000012.1| GENE 21 14498 - 16021 1482 507 aa, chain - ## HITS:1 COG:pepP KEGG:ns NR:ns ## COG: pepP COG0006 # Protein_GI_number: 16130810 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 58 506 11 439 441 199 34.0 1e-50 MTKDTASSTASNDQPLSDRVNNRSRRPATKAFREFVASGWDRTPVPAQPMEVAPYALQRR EALSRAFPGERLVIPAGGLKVRSNDTDYRFRAHSAFVHMTGLEMDSEPDSVLVFEPTENG HDVTFYFRPRAGADTEEYFSDSRYGEFWVGPREDLETMATKTGIACDSIAVASDAFTKDL GSISVRVVRGADTTIDAQIDQARAQVGADSDVSAAGDDELTQTLSEMRLIKDEFEIGQIR HAVDVTRDGFDHVVQSLPRAIEHERGERVIETAFELAARTDGNGVGYDTIAASGNHACTL HWIKNTGQVRDGDLVLVDAGAEVDTLYTADITRTLPANGTFTEVQAKIYDAVLEACEAAF AKAGEHVQRPVKFSEVHDAAMHVIAHKLEEFGVLPVSAEESLGPEGQQHRRWMVHGTSHH LGLDVHDCAQARAEMYTDAYLEPGMVFTIEPGLYFKDEDLLIPEEFRGIGVRIEDDILVT EDGVENLSANFPRTRAEIEEWIRGARG >gi|294972467|gb|ADNU01000012.1| GENE 22 16100 - 16939 603 279 aa, chain + ## HITS:1 COG:BH3372 KEGG:ns NR:ns ## COG: BH3372 COG0613 # Protein_GI_number: 15615934 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 3 247 13 250 266 141 32.0 1e-33 MIDLHTHSAFSDGTQTPEELLAQASDAGVTTLGLTDHDTVAGWSPAVQAARTHGVQLVRG MEVSCRFQGVSVHMLSYLHNPDGARLTAQTEEIRKARVTRTRKIVDLLSADFPITWEHVC EHVGEGATVGRPHIADALVHQGITRDRSEAFATLLHRDSPYYVSMPVISPIEAIDMIHDA GGVAVFAHPAASSRGQVVTDAGMRTIIEAGLDGLEIDHRDNPLAERQKLRERAQEYGLIV TGSSDYHGAGKPNTLAENTTSPHMCERILERAHGVDLVV >gi|294972467|gb|ADNU01000012.1| GENE 23 16957 - 18336 1209 459 aa, chain - ## HITS:1 COG:ML0811 KEGG:ns NR:ns ## COG: ML0811 COG0513 # Protein_GI_number: 15827355 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Mycobacterium leprae # 3 458 31 493 544 455 53.0 1e-128 MTQETFADLGVEAPIVESLTNAGITHPFPIQALTLPVALTGADIIGQAKTGTGKTLGFGI PLLQRILDEQSREQGRAPRALVVVPTRELAHQVADDLRVASRTFSPSIVTIYGGKDFEPQ IRALKDGADVVVGTPGRLLDLYGRRVLNFSHITTAVFDEADEMLDLGFLPDVEKIVAALP AKRQTMLFSATMPGQVIALARRYMTQPTHIRATQASDTSTTSVNTKQYVYRAHSMDKTEL VGRILRAEGRGRTIIFARTKRTADRLTGELKARGFQAQALHGDLNQHMREKALKRFRDGT TDVLVATDVAARGIDIDDVTHVINYQCPEDDKTYVHRIGRTGRAGNTGIAVTLIDWEDVA KWKLINRTLGLDFDAPVETYSTSPHLFSDLNIAKGTKGRMPRAKDADEKSSNSQRPAKSR SARGNAPQRKPRAQKRPRRRTRGGKPTQRPQTERSQADD >gi|294972467|gb|ADNU01000012.1| GENE 24 18393 - 19004 597 203 aa, chain + ## HITS:1 COG:no KEGG:RSal33209_1205 NR:ns ## KEGG: RSal33209_1205 # Name: not_defined # Def: hypothetical protein # Organism: R.salmoninarum # Pathway: not_defined # 8 203 8 207 207 112 34.0 1e-23 MHNDAPTAILATLALYELSVFQSTATDAQFAPHVRDTVELSRVSGYALNHFEALMERIGQ LGGDALALMEERAPSLTAFNERTQPKDWHESLMKSYVHDGLLRDYAKSSLPALDADSKNV ITAVLDDTRREELLRARLGELISDQDILGSRLALWGRKLVVETAKRLTEIVELTTDREHL DAKAWQSALTGHSRRMSAIGLVA >gi|294972467|gb|ADNU01000012.1| GENE 25 19054 - 19278 264 74 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0733_10117 NR:ns ## KEGG: HMPREF0733_10117 # Name: not_defined # Def: ATP-binding protein # Organism: R.dentocariosa # Pathway: not_defined # 1 74 1 74 75 67 48.0 2e-10 MEIKIGIRQSNRELTVDVDATVEDITAQINEAISQGTVLSLKDAKSRTVLVPAQALAYVE VGSETAHRVGFGIG >gi|294972467|gb|ADNU01000012.1| GENE 26 19304 - 19939 462 211 aa, chain - ## HITS:1 COG:MT0252 KEGG:ns NR:ns ## COG: MT0252 COG1309 # Protein_GI_number: 15839619 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 5 192 6 194 204 97 32.0 1e-20 MTSRKRMPRAQRRSQLLSVSTEVFARQGYHATSMDNIALEAGVSKPILYQHFESKHELFT TIMDSAIEELAERLTTTLDTVDSREDRVHQTFYGYFEFVKENRSAFIVMSRTSSELADAR TRWNRAVDTYVQIISESIRGRNNLGEVQAYVMGRAIAGMAEQASQVCIDYDDVDVEEVAR LTAKMAFEGLAGIEKSKFTLTRDPIPSKHSS >gi|294972467|gb|ADNU01000012.1| GENE 27 20001 - 23126 1587 1041 aa, chain + ## HITS:1 COG:MT3296_1 KEGG:ns NR:ns ## COG: MT3296_1 COG0210 # Protein_GI_number: 15842788 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 20 760 18 785 803 139 26.0 3e-32 MKDFFSVRTATDEVVGNLSRGESLAVLGIPGAGKSTVVKDSFARLATSRNADSVLVLTPN REHADVLRNELKSPVRSSATARSVHSYAFGIVAAHTATTKGVPALFVSGADQDVRLAEQL QGYFDSTVTGPQWTTSMTPELARTDVFRTQLRDSISEIMGHDFSYDRIVELAHTHNRPEW EVLAFIGREYEELLTFLGEGAVDTSAVFTKAKHIVEESRVVPGKAWDFAPEVLPAWILCD SVQDFPDSALGFLQALYQRGVCFALTCSPDSATQSFRGGSGDVFAGRHRLGVHTDIALDP LDPHIRGAGAITQTVDSLMRDSADPVHALGYMAPRGSAEGSSQVFSCECSSGSNAARMIA SMIYDRHQDGVPFAEIAVVTRRASSATQLSDELAASGIPVRTSVRALASDPATLPLLRIL SLPPESPEWPNAATACVTGAFGGLDALTLRSLQRELTQLSGVEGPLETLMEWALETDTEL PAAVERAKRMVKAAQESSHELAQYAVWAVWNAAEVADEWQENALRNPAGHHSSYLDAVIR LLALAEKLNEGATSQVTGRDFAMKVMSQKFAQDSLAHTALNDIVTVTTPAGVAHTHFDTV IVTDLQEGVWPNPTVRGTIFKTPQLMRVLKDPATQEELSSENFSQHDFLARRRETIRDEG KLFVAALSRARTRVAVVAVNGHGELPSPLFTAVKGMPWTSQYWVDEPDILPSTLSEIAGS ARLQVNQALDSGDEDSAKPWAQLLKTLHSSGVSAADPNTWWLNPSSELPAMPSDEPVRIS PSQVETYDQCPLKWFFNQNSSQTVDTYPQAFGNLIHEIAQTYPRGGLADMLNHFDEKFEE FTFESEWERQREYADGRATVENLNEYLKNRGDKTFVAAEVVVRSDLDVPLGPARVSGRID RLEKTSDGAAYIVDFKTGNNLPSKPSVQENPQLATYQVAIEAGQATFINDVELIRGITEC AGGELVYPRKAAGQRKPPSNVREQGPIKDTDVYTKTIATIESLVRSARTHTFTATPSDDA CRTCAFTQSCPAFAMGESEES >gi|294972467|gb|ADNU01000012.1| GENE 28 23123 - 26434 1925 1103 aa, chain + ## HITS:1 COG:Rv3201c_1 KEGG:ns NR:ns ## COG: Rv3201c_1 COG0210 # Protein_GI_number: 15610337 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis H37Rv # 2 806 9 774 821 270 30.0 8e-72 MKYSAKQIAERLDLPEPTDEQCAIIEADLTPGITIAGAGSGKTTVVSQRVLYLVANGLVE PQQIIGLTFTNKAAGEMSDKISSHFATFRKKEGITSPSTEMPTIQTYNSFASGLVSEYGA TIGVEPDTQVLDDASAIELADQIVATAHPDFIPAGKSRSSLVKELIQLAGHANEHLRTPE DIITYLDTCLYAFLNREFIDDCIAAIKRKRTIGPHEKEDHISLLQELTAPFLDAPGKLWP ADVIEQVFTHLESLEMCSQIADVRNKKRLAHLLDTFASVKNQNRAMQFSDQVSFAYQAMM ADPNIVESERAKWKVVFLDEYQDTSDSQVKMLKTLFAGLPITAVGDPRQSIYAWRGASEL NIEGFPHDFVSPGQRATSFTMTTSFRNSQRVLAIANAIAGRLPEDSEDTRLKPITTNNEV TSPLGDVEVSVTQGKTHPTYVSDQLESLVEWMRGRTGHRAVLVRKRMHFAPVAQALTAAG FDVQVVGDAGGMGDPFVADTVAILNVATDPHAVEHLMRLLTGRVCSLGAHDLRAFNTIVK NANAEASATPLTAVECVDSFATREYSELSLQANERLRSLAFKLREVRKNHGGAIHMIRTI MRVFDMSYELASLPHERAESHRANIDTFVSAVSSYVARNPTVSMTAVLAWLELANEHDAI SPPPETLDESAVTIMTVHASKGLEFDAVALPFLTMGDLPTQPRSYQAWLTLGELPYPLRG DATKLPHLDLAQEPHVSVSEMKNMFKQTQADKEDIEDFIDAGNIDEKQLPIRDQIALYHR RQERRLAYVAVTRAKAHLWLGASYWGHRTTANQLSPFLLEAIGTLNVAGANIEIPESEPD KPEGLPVEVQWPPVISEAEQKKQSRTRDFVRSQAPLDLDSPVSIGDEGFHRVFARVQKIM SDARPQPPRVPQRMSTTDLVKYRANADAYMREVQRPMPQQPSEYAALGTAFHAWVERHFG QSALTDIHEAQMRKALPAHVRKRFDSLVATFERSAYANRVPHAVELPFELELGGRKVPGK IDAVFKDGDRVTVVDWKTGRKPSADILDTMATQLAIYVHAVQKLPEYADCEVGAEFYFVG SDETFTPDTLPSLDIAGILDAAP >gi|294972467|gb|ADNU01000012.1| GENE 29 26464 - 27540 820 358 aa, chain - ## HITS:1 COG:no KEGG:Krad_1175 NR:ns ## KEGG: Krad_1175 # Name: not_defined # Def: aminoglycoside phosphotransferase # Organism: K.radiotolerans # Pathway: not_defined # 56 291 74 304 315 108 32.0 4e-22 MIAAAHSILEQFTPDKWMPLDDPRGPRLLMSQGDTSYTVSLWNEKQAVDAGASDVASAVL RSVLPKDAPFTVPRTVASQAFAKGELTDARSTLVVADPLPGVPVSTQDFVEQPSLIESLA QTLAILHSCDAGAVADSGLVAQEPQETREQLLDNLDRAAGTRKVPTALLERWERVLETAS AWHFLPAPIHDAIDVDALRCDGAHIVALTDIHRLRVGDPAVDLAAASALLSPNSFEEFLE HYATHREVDDPGLRQRIDLMNEFVMVELLLTAVDSGDKHSVDEVADMLRNFAEVASPDEV SRQPTEEDEFRPANAGVAVSGTEDSDSAENIATTDIPTKDSAIDPDDEDSMPTNRIDT >gi|294972467|gb|ADNU01000012.1| GENE 30 27688 - 28668 548 326 aa, chain + ## HITS:1 COG:CC0266 KEGG:ns NR:ns ## COG: CC0266 COG2816 # Protein_GI_number: 16124521 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Caulobacter vibrioides # 128 323 117 309 313 157 43.0 3e-38 MKNSYTITPASLARSDVWRNHRARGSDGSLTEVLARSGTRVVCSHRGYLLVSSGGLHRFS VSDVDKLAMTGTRIYLGETDAGDVVGIDIDDETKARIDNHVNPPGASAEDYLDAPAQSIH VSDPVWFDLRTIALDLSVTDTGLATALVAVGNWHRTHTHSPRNGKPTTASAGGWVRTDTS TGSEHFPRTDPAVIMAVIHTDPDGTERILLGNNVMWPQGRYSLLAGFVEPGETLEAAVVR EVREEAGVICEDPQYVGSQPWPFPCSLMLGFFARAQSREACADFDEMRTVRWFTRGELQQ EIAAGTVSVPGQVSIAGQMLDRWMSA >gi|294972467|gb|ADNU01000012.1| GENE 31 28665 - 30701 897 678 aa, chain + ## HITS:1 COG:MT3291 KEGG:ns NR:ns ## COG: MT3291 COG0210 # Protein_GI_number: 15842783 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 2 677 6 700 700 475 43.0 1e-133 MNELLDNLDPEQREVVTHEGGPLVVLAGAGTGKTRAITHRIAHGAHTGHLPAHHVLALTF TAKAAGEMRSRLRGLGVPQVQARTFHSAALRQLRYFWKDFAQGPFPELMDGKHRPLGRIL SGLGIEPERETIRDISAELEYAAVNLVGIDDYPQFAQSRELPPGIDTTAMVAIMRAYAEY KTTNRLIDYQDVLLILSGVMASTPHIAAQIHQQYRHFVVDEFQDVSPIQYELLKNWLGER DSLCVVGDPAQTIYTFAGARDSYLMNLGNVLPQARTISLVRNYRSTPPIVEAANRVLAHT GRNRMVLQPQRTGGVPPSFHEYPDDTSEATGVAQRIAAQISSGVPVSDIAILFRTNGQSP AFEHALDEHGIHYLVRGGEQFFARPEVRQAGALLRANMSQGKTGKLDTVVSDLLTTLGWQ EVGPRVHGAVRARWESLNALVNLAADMQQESQLPVPLSEFVAELEQRAEAQHAPSVQGVT LASVHAAKGLEWPHVYLVGMSEGLMPISYASTPLEVAEERRLFYVAVTRAQDSLTVSWSQ ARQASSQSTRKPSRFISEMRGHTPTQRERRGHTRRSSARTCGCGNPLVSSQERRDKVCHE CSQAVDENLVNALKEWRTQTARELSVPAYMVLTTATLLAIAQARPHTLDDLGQVSGIGPV KLGQFGQDILEVVRSSST >gi|294972467|gb|ADNU01000012.1| GENE 32 30662 - 31558 534 298 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394605|ref|ZP_06804824.1| ## NR: gi|295394605|ref|ZP_06804824.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 298 1 298 298 549 100.0 1e-155 MLMFNRSVPLVWRSSSCLQIGIDDPVLIDGLSVADRELIELIKMGISPEVLADKASQLGL THERTASLLSLLEESQALVPRVQLHTTPVTHQVDAVAHLRGANPSELLMALKNQRVVCVG PLAPELAKLLSACGFSVTSAPSVLQATVRDGAIVVVTSVWVPDLMGARSLQDSGTQHVSV CVQQAQATVTHVVRPSLSPCLACLTHYVIDVDDEWMTGWRGIREQAPSARRVDPLLAWSS LVTCARVLREHVLEDFTVPQTHRLGLAGDTASEVAQFHTACDCRMAQVLEDLTTSSMS >gi|294972467|gb|ADNU01000012.1| GENE 33 32077 - 32625 289 182 aa, chain + ## HITS:1 COG:Cgl0757 KEGG:ns NR:ns ## COG: Cgl0757 COG1451 # Protein_GI_number: 19552007 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 19 174 4 160 162 97 35.0 1e-20 MSNSFTAQDVARMLESGELSIKHSSRRKKTVTLKRSGGRWVLAAPVHYDPRSDLGQIAQL LTRLSAKSGRESSDDDLLSRARELNTTYFNDGIEPESVKWVENQNSRWASCSTATHSIRV SHRLQVVPEWVLDAVLVHELAHLRESDHGPRFRELTDRYARSRDADIFLEGFSRGIDYGS NE >gi|294972467|gb|ADNU01000012.1| GENE 34 32591 - 33142 385 183 aa, chain - ## HITS:1 COG:no KEGG:Bcav_0711 NR:ns ## KEGG: Bcav_0711 # Name: not_defined # Def: NUDIX hydrolase # Organism: B.cavernae # Pathway: not_defined # 40 170 58 188 197 147 56.0 2e-34 MTADPRAAHTVRALAEVATTSALSVTEFVSNNPRPLDRSGGPAHVTASCVVFSPDFTHVL LTHHAKGRFWVQFGGHVEPGDATVREAALREAREESGVQDFLWFSQQPIDVHSHDLPGAF GKCATHHDVVYGAILSPDAHTHVSDESLDVKWFPVDELPDTVVDDLPKRLPGLIRSTRNQ YLG >gi|294972467|gb|ADNU01000012.1| GENE 35 33139 - 34449 1070 436 aa, chain - ## HITS:1 COG:MT3287 KEGG:ns NR:ns ## COG: MT3287 COG5282 # Protein_GI_number: 15842777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 10 413 15 435 472 182 32.0 1e-45 MSDKDRDKDSSGDDPLNNLFGMLFSLGGAQGGAQGQFPAGGIPIDGNMLSSFLGQIQGLM GQSGSASDVARQTAVSKVPTPDPSVTDEVARGTHDAFRLAELWLERVTEFTTTNEPQSLT RKDWATGSVDGWVELAQPIQANMSRTFTDSLSDQIPEEMRPFMSSMSAMMTNMSASLFGA QIGEALGTLSGSVLTGTDYNLPILDAPALIESNIAGASAELDLDHTQLRIFVACVELAKH SLFASTPWLAGHIRTAFAKYASNVEVDSSNIHDMMGNIDPQNLHAATEELRNGMFKPVST EEGEQAKESLTRIVSAVAGWADVVAYNACEPLEQRDEIREALRRRTTMTSDSEDALSQLI GLDLTPTRLRDAAALFTYLESSEGAEARDAVFRHPDALPTTADLDDPLGYSERHTEQAQT EDDMDEALRRLLEEES >gi|294972467|gb|ADNU01000012.1| GENE 36 34633 - 35709 1048 358 aa, chain + ## HITS:1 COG:Cgl0759 KEGG:ns NR:ns ## COG: Cgl0759 COG3480 # Protein_GI_number: 19552009 # Func_class: T Signal transduction mechanisms # Function: Predicted secreted protein containing a PDZ domain # Organism: Corynebacterium glutamicum # 34 344 34 339 350 197 40.0 2e-50 MTPSAQANTPKKRLHVTTLSTLITYTLVIVAALIPVPYMVEMPGPVFNTLGEHEGTEVVT ISGAKTYPTSGTLDMLTVAVAGGPGRQVYPSQALWSVVKEKDTVVPSEAYYPLTTTRDQV TQENNAQMATSQDFAVAAALNHLGKKYDTRLGIGSVAAGAAVEGVVKPGDIITKLNGEDI NGSAEDIVRVQDTVAKGDPVDLDIEREGKKLHETITPKETADGPKLGVVLAPTYDFPIDV KFNLEDVGGPSAGLVFALTIIDKLEPGDLTGGKRIAGTGQISEDGTVSPIGGARQKVVAA NEAGNDYFLSPADNCAEAAQAAKGLDMKVIRVDTLDTAVNAIDAITNDDIGTVTMCSG >gi|294972467|gb|ADNU01000012.1| GENE 37 35764 - 38694 2215 976 aa, chain + ## HITS:1 COG:Cgl0762 KEGG:ns NR:ns ## COG: Cgl0762 COG1615 # Protein_GI_number: 19552012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 7 947 8 961 967 597 36.0 1e-170 MLTLGAVAVLLVLFVVFAQVFTEALWFQQLGFLQVFTTEWITKIILFVVGVILMGGAVWF PLMLAYKKRPVYAPTSPRQENLDRYREAIEPLRRVVTLVVPAVIGVMGGFALSAAWQQAL MFVHSTEFGQADPQFNIDLGFYMFSFPLIRTLVDYVAMALLLSLIAAVVAHYLMGGIRPG DDSKLTVSKTARYHLAISAGLLILAQGVRLFLQRYSVMTSTGGLMTGASYKDVHITIPAM LICAIAAVVVALIMAANAFRDVWKLSITAVVMLLVLGAVSIIALPATVQQLQVQPSEQSL EREYLQRNIDATRHAYGIDDVEVIPYSPSTDGKSGALREDAQTAASIRLLDPNLVSDTFR QIQQQRPFYSFPEQLDVDRYRINDEMQDTVIAVRELNPASQADSSWLNQAVVYTHGFGVV AAYGNRQGGDGQPAFLEANIPPTGELGEYEPRIYFGEQSPRYSIVGAPEGADPREIDYPA DNEDGGAQVYNTFKGDGGPSVGNFFNRLLFAIKFQDEQIVLSDALNSESQILFNRSPRAR AQKVAPFLQIDGDPYPAVVDGRVQWIMDGYTTSKEYPYSTPQVLQDATQDSNTQRSGTTA ALPPQQVNYIRNSVKVTVDAYDGSVNLYKWDDEDPVLKTWSKIFPDMVKPMSEMSGDLMS HVRYPEDMFKVQRSLLTRYHVDDANSFYTGQDFWTTPTDPTVNQESRLMQPPFYLTLQMP NQESPAFSLTSSFIPRPTEGQTRNNLTGFLAANADAGNEKGVKHDDYGKLRLLQLPRNTT FPGPGQAQNNFNTEPNVQSSLNLLRQGESKVQNGNLLTLPVAGGLLYIQPVYVRSAGETS YPVLQRVLVAFGEQIGFAPTLDEALDQVFGGDSGARAGDADSSGEASEGEKGGADAGDEK DKPAREPNLQKALEDARNAMKESDEALKNGDWNKYGEAQERLRKALDEAGKLQDQQTGGG QGGGQGGQNNEGGQNG >gi|294972467|gb|ADNU01000012.1| GENE 38 39065 - 41065 1828 666 aa, chain + ## HITS:1 COG:CC0620 KEGG:ns NR:ns ## COG: CC0620 COG0286 # Protein_GI_number: 16124873 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Caulobacter vibrioides # 21 658 5 605 611 383 38.0 1e-106 MSDTSEILDSITPKQTAKVNSLNAAIWQTADDYLRLIVPAENYGDYIIPFTVLRRLEGRL APTKQAVLNLVERENAQGTDPAIVGLKIENKFKLRFWNTSELSLERLANSDDALKPGLKQ YLNTFSPNILEIWNAFEFDKLIDLLDRNNQLWNVVQHFASIDMSDEALQDQTMGDIFENL MYRSFARKGKDAGEFYTPRDAIRLMTSILFTSNDTELEEDGIIRSVYDPTAGTCGMLIAA RDALRAINPGIEVVVAGQELKESSFAMGKSDLLMQGFKDPEVLKFGNSLINDQYAGDTFD YIMANPPYGSSWKAFQKDVKKLQEQGDPRFSEGLPAVSDGQMLFLMHIAHKLAPADGTTK GGRAAVVTNGSPLFTGDPESGPDGIRKYLMGAQGGSEVLDAIIALPNDMFYNTDIATYIW ILDQNKEPRRRGRIQLIDATGISAPMRKNMGKKRVELSEDNIREITKLYKDFEQNERSII VTADDLTYRDVPMFKVAHYAVNVTEETVAEAMSHKSALAEHEAVIREMKGREYNELPAAL KVSAKAHGVKMGAPLLRHIVKALAVEDQNAPASLDEKGNPIVDASSKVIERIPYLDDVSE HMEREILPFVPDMQWDESLAKVGTELPLTRLFYKPQETRSLEELDADIAASLDRIYAMFR KVREDD >gi|294972467|gb|ADNU01000012.1| GENE 39 41058 - 42224 309 388 aa, chain + ## HITS:1 COG:XF2722 KEGG:ns NR:ns ## COG: XF2722 COG0732 # Protein_GI_number: 15839311 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Xylella fastidiosa 9a5c # 4 388 26 432 468 94 24.0 3e-19 MTRWQSVPFHTLFRRVPKRTGFPAEELLSVYREYGVIRKSDRDDNFNRPGNLNDYQLVKT GDLVLNKMKAWQGSLGISPHTGIVSPAYFVYTPVSDNDESFLHYALRCRDAVDYYAAHST GIRVNQWDVSPEWLDAMPVPVPDLATQRRIVDYLDKEISEMNALIEEVQRLTKLVIARRD ATAGSLLADLPVAPVSMFWRVIDCLHITAPFVEVGTNFLVSIEQLGHRNLDLTRANRTDD ETFSILRVGDRKPAPGDVIMSRNASVGKCSIVRETDPPIALGQDVVIFKKNDKHDSRLLL HFLGSDVIKRTIEMSTVGSTLKRINVGTIKKLPYPVATLEKQREIADELDREFMRMDSLI EESTRLIENLKAHKTALITEVVTGRKEV >gi|294972467|gb|ADNU01000012.1| GENE 40 42226 - 45765 2888 1179 aa, chain + ## HITS:1 COG:CC0623 KEGG:ns NR:ns ## COG: CC0623 COG0610 # Protein_GI_number: 16124876 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Caulobacter vibrioides # 7 990 6 931 964 520 36.0 1e-147 MVNPILEEAMELTICRSLNSQGWIWNEGANDVGFDPELGLFPEDVLHWLKTQHPEQYERA IPPTANDTERQSRERKLLTRLTKELDYTPILDGITKKVNGGLLGTLRDGFSFTQADLGTV NFPDMAGFFPYDPAKTDVTEKATYNRLRVLQQVHFEKGDGGEIDLVLLVNGIPVITMELK TDNTQSIEDAVLQYKHDRKPHRSKRPLLNPGRCLVHFAVSSREVMMTTELNGANTVFLPF NQGTEDGRAGNPDNPNGYNVAYLWEWVCSPDLLLRILKDYALWEPSTKGNEGRLIFPRFH QLRSVERVTSDVAVNGTGRRYLIQHSAGSGKTKTIAWMAHRANKMIHNDGTKLFDCVIVV TDRTVLDKNVADGLSLLQASEGMVINITNDDTSKSDMLNHYLTQGKRILSCTLQTFPALA QTIDRSPKLRNRRWLVIIDEAHSSQHGKASRTLLETLSDTPDEIAEAASRAAADIEGGED TYAGEESHNETPTTTSAASLTRAEKDRLQQQRDSAVARSSNVTIVALTATPKAKTLAVFG EPSPDNPEKRVAFDLYSMAQAIDENFILDVLHNYISLSLYAKIEDKLGREDEVVLGEAKS ALKKFVRSHEKTIRSKAEVAVEHFNNNVRNLLGSTAKAMVVCDDRMSAYTWFRAVQDVIK SNVKYQGLEALVAFSGSLDVSKDEDIEEFVTESSLNNENAPEGKRRMETTKMFDGDSYKF LIVANKYQTGFDEPRLSAMYVDKPLSGVLAVQTLSRLNRTLPSKNKSKTFVVDFINDPES ILQAFQPYYSQASIDTDVDPDVLTDLARVLDTSQFYDIEEMEALANVVMDPDVDVKKKDS LIRVGIDPIVTRWADFYTEAVVSGNKDNEAVATDFRANLKKYVHAWDFLSQFIDFQDVTL HKRAVFADLLERNLKLGKKTREEDYVTGVDVVKSAVTGDVEKGTKLELKIEDAQTPLPVP GFDGRISSGGASDPLQGAFRKAVEEVNELFSAAGIDMSNSANTRMVHAVWEALANDEEVE MLATKNPQDTLAKSSRLREKVLSAILGAGTQHEKFTNLMLGGDDALNVLTAAMSRLAVAA MEDKVRGIKVPDNALVREIEEGSEESPATRRVEELLDVMRMHAGSNRVEAHLARVLDDAL VKRGNSNVFETLRAEFLKHSLPVDGELYQGVVMYAVKRY >gi|294972467|gb|ADNU01000012.1| GENE 41 45842 - 46318 181 158 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227427067|ref|ZP_03910130.1| acetyltransferase, ribosomal protein N-acetylase [Xylanimonas cellulosilytica DSM 15894] # 9 139 7 159 176 74 33 2e-12 MAQSHFIVRMTQNDWSRVRAIRLASLKDAPAAFGGSYERESQVDEAKWRERVETATTFMC VKQGHDIGFATFAVRDGCADLGGTWVHPAHRGHGAVDALINAVFTEAQRAGYAEIRLRVF EENQRAIGAYLRLGFRMTGEIDRLPDGREALYMVHTFG >gi|294972467|gb|ADNU01000012.1| GENE 42 46355 - 46627 324 90 aa, chain + ## HITS:1 COG:DR2465 KEGG:ns NR:ns ## COG: DR2465 COG0075 # Protein_GI_number: 15807452 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Deinococcus radiodurans # 8 90 5 87 379 107 56.0 6e-24 MTANELPRPDVDPGGLLEYSVVFTDRSLNHMSKRFVNVMQETLHILRSTYNAHTATIVPG GGSYGMESVARQFANNKNVLVVRNGLFSYR >gi|294972467|gb|ADNU01000012.1| GENE 43 46707 - 47489 683 260 aa, chain + ## HITS:1 COG:DR2465 KEGG:ns NR:ns ## COG: DR2465 COG0075 # Protein_GI_number: 15807452 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Deinococcus radiodurans # 2 257 119 376 379 284 54.0 1e-76 MPAPIDQVVAHIKDTKPDLVFAPHVETAAGMVLPDDYVRALADATHSVGGLFVLDCVASG PLWINMEEAGVDILVSAPQKGWSGSPACGYVMFSETARERLDSTETSSFALDLKKWTNIC DGYVTGAHGYHATMPTDTIQHNLGLMKEAVDTGLDVLRERQNDLGTRIREALTERGFTSV VAPGFESPTVVVVNTDRDDIVPAFARAGVQVAGGVPLQVDEPADMKTFRIGLFGLDKWAD VDATVERFTTALDAVLAENQ >gi|294972467|gb|ADNU01000012.1| GENE 44 47556 - 48782 875 408 aa, chain - ## HITS:1 COG:MT0881 KEGG:ns NR:ns ## COG: MT0881 COG0436 # Protein_GI_number: 15840271 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 26 402 12 393 397 227 39.0 4e-59 MNEQTLPYRVSEAAGLLDAQGNIRGTVFGEMSTLAAQHGAINLGQGAPSSPTPDFLIDDV AHFMRAGMNQYAPPTGVPELLDAIVAQRSRRYNHAVTRDHVLVTVGATEALTSAIMTLVP AGGVLLTFEPFYDSYAAACEMAGARLETVPLVFDGAVWQPDWDAFDAAVSSADAVLLNTP HNPTGMVLGRDDLVRVFQACEDADAWLITDEVYEYLVFDPAEHVSVAALFPDSHRIVTVS SAGKTFNVTGWKIGWLVAHPQVRQQIQALKQFFSYTSGTPLQPAIARALNEHEDFADQNR DALKRCRDVLMESLERVPGITFNVPAAGYFTVVDFAEVTTRDSHALNELLTTEFGFTGIP VNRLCRAGSPVAQRLEHALRLSFCKTEDEMREVATRIDRLAQNMDALK >gi|294972467|gb|ADNU01000012.1| GENE 45 48779 - 49552 828 257 aa, chain - ## HITS:1 COG:Cgl0776 KEGG:ns NR:ns ## COG: Cgl0776 COG0483 # Protein_GI_number: 19552026 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 17 256 21 259 260 262 57.0 5e-70 MKDLDLAIALADAADHLTLDSFYNRDFTVDTKPDMTPVTTVDRAVEEKLRELLALHAPDD AIVGEEFEPTTGTGTRQWIIDPIDGTKNFVRGVPVYATLISLYDGETPLLGVVSAPAMNR RWWASKGEGAWTTVAHDPEPVQIHVSQVSKLEDASFSYASLGGWKDLGKRDALLELCDTV WRTRAYGDFWSYMLVAEGAVDIAAEPELEIYDMGALVPVVTEAGGTFTSLNGKTGPFDGN ALASNGLVHSSALELLS >gi|294972467|gb|ADNU01000012.1| GENE 46 49640 - 50656 496 338 aa, chain - ## HITS:1 COG:ML0791 KEGG:ns NR:ns ## COG: ML0791 COG1162 # Protein_GI_number: 15827343 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium leprae # 1 306 1 304 327 266 52.0 3e-71 MSRYSHFTEEDYRPRPNRRGSRPRTKDRPDYSDALVGFVFSVDRGRYRLALPDGTRVTGV RASHLRRRPIVPGDRVRVVGDTSGAEGTLARIVEIEPRSTVLRRTADDTDLTERVLVANA DQLVIVTATADPNPSEGLIDRTLIAAFDAGITPILAITKLDLKPADALRERFAHSGVQIV ECGFDDHGHPRVDQLRGLLDGHVSVLVGHSGVGKSTLMNALVPHVSRATGSVNEVTGRGR HTSSSALGVELPDGGWLIDTPGVRSFGLAHVTPETVLSAFEELVPATAECPRGCSHTKDS PGCALDAWVTNGKAGDAGPDRLNSLRRLLTNLASAPQY >gi|294972467|gb|ADNU01000012.1| GENE 47 50653 - 51930 856 425 aa, chain - ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 7 423 14 429 430 348 48.0 1e-95 MVNRTHWPVPRATAPVRATCDIPGSKSLTNRYFVLAALSNAPSIVRSPLVSRDTELMMRA LDALGATFTPHGNDISVEPIMGGDNSASDATIDCGLAGTVMRFVPPVVLATGTRAHFDGD PQARVRPMQTILDALTALGATVDSDDGFLPFSITTGDHVGNTVTIDASQSSQFVSGLLLS AARFPDGLTVKHLGETVPSKPHIDMTVATLKQYGVKVTQPDPTTWVVEPGVIQATDVTVE PDLSNAATFLGVPLIAGGSVTVPHWPERTDQAGHAFMDIARAFGGTAELTPAGLTVTGSG TVQPVDLDLSQVGELTPVVAAIAAHAHGTSHLRGIGHLRGHETDRLTALATELTKAGAQV EEGPDYLTITSTVSTGCAWSSYADHRMVMAGALVGLTQDVTIEDPDTVAKTLPQFTDMFE RVVSA >gi|294972467|gb|ADNU01000012.1| GENE 48 51933 - 52448 532 171 aa, chain - ## HITS:1 COG:Cgl1340_1 KEGG:ns NR:ns ## COG: Cgl1340_1 COG2259 # Protein_GI_number: 19552590 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 16 144 1 142 142 79 36.0 2e-15 MLNVANPIGKVVSVSLVRLIARPMLASAYIANGLVRVKNPDVAASSVQPISALAKKKLDV DVDPALIARATGVAQVTAGSLLAIGKFPRLSSSILVTTYLVEVVGQQLNKETRSTDGLLA KTAILGGALLASVDTAGKPGLAWRAQHAAEDLWREVERTSAKAIDAVSPNA >gi|294972467|gb|ADNU01000012.1| GENE 49 52574 - 53203 735 209 aa, chain + ## HITS:1 COG:MT3320 KEGG:ns NR:ns ## COG: MT3320 COG1595 # Protein_GI_number: 15842811 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 17 206 86 275 284 256 67.0 2e-68 MEKNTMSAPSDHDVDLTTETEDERRARFENEALEYVNQLYAAALRMTRNPADAEDLVQEA YLKAYAAFHQYQPGTNLKAWLYRILTNTFINSYRKKQRQPQETGGDTIEDWQIARAANHT SSEGKSAEIEALERIPDSDIKEALQSLPDDFRMVVYYADVEGLPYKEISQIMDTPMGTVM SRLHRGRRQLREMLADYAAERGFGEGVGS >gi|294972467|gb|ADNU01000012.1| GENE 50 53200 - 53475 256 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394624|ref|ZP_06804843.1| ## NR: gi|295394624|ref|ZP_06804843.1| protein family anti-sigma factor [Brevibacterium mcbrellneri ATCC 49030] protein family anti-sigma factor [Brevibacterium mcbrellneri ATCC 49030] # 1 91 1 91 91 150 100.0 3e-35 MTRETSWSQSRLESLERIYAFLDGEANDDAILAIKEHLQCCPECEREYKIEALMKELVRR SCCQDQAPQDLADKIRARITVERTRITYHRE >gi|294972467|gb|ADNU01000012.1| GENE 51 53565 - 53639 77 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKRARKRRDRKRNKANHGKRPNA >gi|294972467|gb|ADNU01000012.1| GENE 52 53725 - 54306 368 193 aa, chain - ## HITS:1 COG:alr1529 KEGG:ns NR:ns ## COG: alr1529 COG2755 # Protein_GI_number: 17229021 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Nostoc sp. PCC 7120 # 3 185 15 205 206 70 26.0 2e-12 MAGDELVAGHGDARSLGWAGRVAVRTHPSLANAEFYTLAVPQEDTGAFAQRAFAEASLRF SDGGINRLVLAPGSHDVDSGLSTARSRLNLANVLDEALAAEVSTFVVGPTPGRSESRNEK VAQLSTGFADVAHRRAVPYVDCFSPLKSHPVWQRDLASSSRELPAQEGYGLIAWLVLNRG WFDWLGVQNVMEG >gi|294972467|gb|ADNU01000012.1| GENE 53 54334 - 58062 3472 1242 aa, chain - ## HITS:1 COG:MT1286_3 KEGG:ns NR:ns ## COG: MT1286_3 COG0567 # Protein_GI_number: 15840693 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 363 1241 2 895 896 972 54.0 0 MSETTPTDLTGDFGSNEWLVEELYEKYKNDKNSVDKEWWPFFEKYEGAPASTSTASGTKS NSQAPANSKPSEKGSKEAQPKAEVKTKGVEPSVNEAETTKAESKVASQKKSSPTQSAPKA SDEKAEDVVTKLRGPAKLIAENMDASLEVPTATSVRALPAKALIDNRIVINSHLRRTRGG KVSFTHLIGFAVIRALKAFPTQNVYYEVRDGKPVMVQPAHVNFGLAIDIPKKDGTRSLLV PNVKKAETLTFKQFVDAYDDLVNRARSGKLTADDFAGTTVSLTNPGGIGTVHSVPRLTKG QGCIIGVGAMTYPAEFQGASQETIDRLGVSKVMHLTSTYDHRVIQGAGSGEFLKLVHEYL LGADGFYDEVFESLRLPYEPVRWQPDVHTEDQDDVSKASRVIELIDAYRTRGHLMANTDP LVYRQRSHPDLDINNHDLTLWDLERKFSTGGLGDGSQMRLRDILGILRDSYCRTTGYEYM HIADPEQRRWFQKKLEVPLQELSRAEQGHILGRLNASEAFETFLQTKYIGQKRFSLEGGE STIVFLDEVLNRAADSGMQEVTIGMAHRGRLNVLTNIAGKSYTQIFREFDGTQSPDSFQG SGDVKYHLGMEGSFTSPDGNTTKVSVAANPSHLETVNPVLEGITRAKQDVSSDDTQDFSI LPVLVHGDAAFAGQGVVYETLNLSELRGYTTGGTIHVVINNQVGFTTPPASSRSSYYCTD VAKAISAPVIHVNGDDPEAVYHAAQLAFDYRQEFNRDIVIDLVCYRRRGHNEGDDPSMTQ PVMYSLIEKKMSVRKLYTDSLVGRGCISTEEAAEVVKDYQNKLEAAFAETKEAEKGASDN LGVTKPWERPDDLESDSTFETAVPASVLERIGDVHTEVPEGFNVHKKLRSLLEKRKEMSR SGGIDWGFAELLAFGSLLMEDVPVRLAGQDSRRGTFTQRQAVLIDHENDNEWTPLANLTD NQAKFWVFNSLLSEYAAMGFEYGYAVERTNALVLWEAQFGDFAQGAQSVIDEFISSSEQK WGQTSGIVLLLPHGFEGQGPDHSSARIERFLQLCAEANMTVAYPSNGASYFHLLRRHAHA EVKRPLVVFTPKSMLRLKAAATDVEQFTSGGFEPIIPDTSVDAKNVKRVVLVAGKLYWDL LAKRQKLEDTTTALVRVEQLYPLEIDALNELLGMYPEDAQLVWAQEEPENQGAWPFMHYK FSQLLSDRKVEVVCRKASASPSTGLKKQHDVEQADVIERTFK >gi|294972467|gb|ADNU01000012.1| GENE 54 58173 - 59618 1117 481 aa, chain + ## HITS:1 COG:Rv1843c_3 KEGG:ns NR:ns ## COG: Rv1843c_3 COG0516 # Protein_GI_number: 15608980 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Mycobacterium tuberculosis H37Rv # 204 481 1 278 278 379 70.0 1e-105 MRFITEPGSHDLTYSDVFMVPNRSAVASRFDVDLSSVDGTGTTIPIIASNMTAVSGRRMA ETIARRGGMAILPQDIPVPVVAQTIEWIKERHPVVETPLKLSVRDTVLQAIHLMPRRVHG CAVLLDDGKFAGIVSQDSLQGVDQFTSLADVMEQPQVTFDIAEFNDVDNRRNLFDKLEDA RLDYAPVLSGAEVVGCVTRASILRSTIYSPALDARGKLRVGAALGVNGDVVARAQALAAA GADVLVLDTAHGHQEKMIEALTAVKAEDLGLPLVAGNVVTGEGTRDLIEAGADIVKVGVG PGAMCTTRMMTAVGRPQLSAVLECAQAATELGKHVWADGGVKYPRDVALALAAGASQVMI GSWFAGTHESPGDMLVDEKGQRYKESFGMASARAVANRTRNESPFDRARKALFEEGISSG RMFVDPQNPGVEDLIDSITSGVRSSCTYAGARSLPEFAERAVVGVQSAAGYDEGQPRLQS W >gi|294972467|gb|ADNU01000012.1| GENE 55 59726 - 61033 1067 435 aa, chain + ## HITS:1 COG:Rv1842c KEGG:ns NR:ns ## COG: Rv1842c COG1253 # Protein_GI_number: 15608979 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 10 435 14 447 455 291 43.0 1e-78 MEWLYLALALLLIVGTGVFVAAEFALLTLDKHTVDEAVRNGQPGAKYLEKGLHHLSTQLS AAQVGITITTLLTGYLMQPSLGALLIPLVEDQGASEAVSRAVSLTVALVISTVLSMVVGE LVPKNLAISAPMKAGSFAVPLQYMFSIVFRPVIALLNGTANKALVAMGIEPQEESSAGRS ADELTSLVRHSADEGTMDVQTADLLARTLSISERTAEDVMTPRTRMATVEKDTTAAQITE LARQTGFSRFPVVGDSRDDIVGVVHVKQAVAVPLANREDAFAAGLMTDVSEVPETMPVDH LLVVLRSRGNQMVLVIDEYGGTAGVATLEDVVEELVGEVVDEHDRLSVQVRPARDGSWLV PGSLRPDNVTEATGVEIPEDVDYETMAGFVMFSLGTIPKVGDSVRVKDASLVVERMHGHR IERLRLVPDYLGGAA >gi|294972467|gb|ADNU01000012.1| GENE 56 61030 - 62088 791 352 aa, chain + ## HITS:1 COG:Cgl1413 KEGG:ns NR:ns ## COG: Cgl1413 COG1253 # Protein_GI_number: 19552663 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Corynebacterium glutamicum # 1 341 1 346 354 231 38.0 2e-60 MSDWMGLVWLVFLLAGNAFFVAAEFAVVSAKRAQIEPLAEEGRKTAKTTLYAMEHVSLML AICQLGITVCSLLIGNLSEPAIHHLLIGPLNYLSIPEQASGVISFVLALGIVTYLHVVVG EMIPKNIALATSRTSALLLAPPLVFLAKIFGFVIRPLNWFANFLLRLVGVTPRNDVNAAY TVEEVQQIVAESKREGLLNDETDLLKGALEFSDKSVGDVMVALSSVVTIHDDATPEYIEH LVGRTGYSRYILIDGDGRPDSYIHVKDVLYADTPETYTEPVPAKRFRSMVTVSVTDEIEE ALATMQHAGNHVGRVIDGDGKVVGVLFLEDVLEELVGEVHDAMQRNQPRTPR >gi|294972467|gb|ADNU01000012.1| GENE 57 62290 - 63189 757 299 aa, chain + ## HITS:1 COG:sll0777 KEGG:ns NR:ns ## COG: sll0777 COG1876 # Protein_GI_number: 16331926 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Synechocystis # 185 290 164 289 305 61 33.0 3e-09 MENETMQPAVRRRDLRRARKSQSRKFPTFAKLTSFAVAPQATSAAPAVRGSNGAALRALR RKRNVTLSAVGTFAVAGAAMTATLLSGVGASSSGQVTTEADASSHAVSSESVSGGANGDD DILAGQSGAVGGVKADSKGDPRASSLSVKRTALPGCEGKVPEGEAQNGQLPEEWLCNLGI GDHKLRQDAAVAFAKMNAAYKADTGKDFELTDTYRTLDAQVSVAGRKPGLAAKPGTSLHG MGLAIDFGGGAAQASGPLYDWLVKHGHEYGWENPDWAKSSKYEPWHWEYVPGRQGVKGY >gi|294972467|gb|ADNU01000012.1| GENE 58 63261 - 64883 1168 540 aa, chain - ## HITS:1 COG:BS_yhfL KEGG:ns NR:ns ## COG: BS_yhfL COG0318 # Protein_GI_number: 16078091 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Bacillus subtilis # 25 539 7 511 513 240 30.0 5e-63 MKSDVSLVDPLEYNLATRNAAGDMLLRVASVSPHRVAVIEKDTSRTYAELNEHSNALAHK LSEIHNDRTKPVALLMGNSYDFLVAYFGIVKAGLTVMPINFTLGPDDIQWILNDADTLTV ITDDTFVSVLTTQTAQPAPTPANVIVRKTDTSDGTPGEDSHIDFHDLQSQGSAEPLELII NDDDVAQCIYTSGTTSRPKGALSKHSAVVTAAYMNANFLGVSWDNGPTPFLNILPLYHVT GLNTLVIPVLSFGGTVVLHNPFDPAECARLIEKHNVEIIMALPMMFGALLQANEQVTANI SSVKTAIYAMTHMPDSVLTALQNAMPDARIILGSGQTEVLPATVHHWPSQNPEKRGSWGM PVPSVRMEIMGPDGTLLEPGQEGEIVYRGPHVTPGYWNNAQANASAFAYGWFHSGDIGYK DDDGTVWFTDRAKDIIKTGGENVSSLKVEQILLDAPGVVEVAVVAAPDSHWGEAVTAVVL SDRVESADDPACVELEKEIIDYARARMSGFETPKKVKFVDALPRTSTGKIRKNVLRDSLK >gi|294972467|gb|ADNU01000012.1| GENE 59 64917 - 66050 862 377 aa, chain - ## HITS:1 COG:PA2889 KEGG:ns NR:ns ## COG: PA2889 COG1960 # Protein_GI_number: 15598085 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 5 375 8 379 386 347 47.0 2e-95 MDDLQALRKTVATFVEREINPHVDEWERTGMDSRKLWKSAGDLGLLGLTYDPKYGGGGAS LAYSMVLAEELGKADAAGVGLGLTAHANMATPTLNQLGTPEQKEKYLRPAISGEAIASIG VTEPDAGSDVAAIRTTAKRDGDHWVINGQKTFITNASHADWVCMLVRTSDEPGYRGMSQI IVPTDTSGFEVTRVLDKLGNRCSDTCELRLTDVRVPVANTIGQEGRGFQQQMLQFLIERL SGTASMIGSCDRALERTREYMRTRKVFGRSLAQCQYPAFRITELQAEIEILRESLHGAVQ RVERGEDVTRLTSAAKLKAGRLSREVADYVVQVHGGMGYMEENWTARFMRDSRLTSIGGG ADEVMLQVLAKLDGLDV >gi|294972467|gb|ADNU01000012.1| GENE 60 66202 - 67980 1410 592 aa, chain + ## HITS:1 COG:no KEGG:MMAR_4531 NR:ns ## KEGG: MMAR_4531 # Name: not_defined # Def: hypothetical protein # Organism: M.marinum # Pathway: not_defined # 1 577 1 570 570 608 57.0 1e-172 MSSDQLGSRPVRIANCSGFYGDRLSAMTEMLHGGPVDVVTGDYLAELTMLILARQRSKDP AKGYAATFLAQLRENLDVIVRKDVKVVVNAGGMNPQGLAEAVDGLAKQAGLDVSVATVCG DDLTERAPELGLGEPIAANAYLGAHGIVHALNSGAQIVVTGRVTDASVIVGAAAWWHGWE RENYDAIAGAMAAGHVIECGAQATGGNFSFFHEIPHMTRPGFPIAEVAADGSSVITKHPD TDGAVTEETVLSQLLYEIQGARYAGPDAVLRLDSITLEQLGNDRVGITGAVGEAPPPDLK VSVTELGGYLNEMVWMITGLNAREKADLVKHQFEAALTEKPAEVEWSFAHSQPGSATTQE EATSVLRVLARDPDPAKVGRAFSNVGVELALASYPGAFMQRPPEAGKVYGRYRAAYVPQD TPNHTVILADGTHTTITPPHSTQKLEPTSADSHHPPVPDQSPEQGGTQGSQVHLGDVFGA RSGDKGGDANIGIWARNEAGYAWLKRNMTVELLRTLLPEARELEVERTELDNLGAINFVV HGILGEGVASQARFDPQAKGLGEYVRSRTVRLPEDVLNAPVTRGRNTNSQTA >gi|294972467|gb|ADNU01000012.1| GENE 61 68000 - 69595 1413 531 aa, chain + ## HITS:1 COG:MT1002 KEGG:ns NR:ns ## COG: MT1002 COG4799 # Protein_GI_number: 15840400 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Mycobacterium tuberculosis CDC1551 # 1 531 1 531 531 723 67.0 0 MTVLTSKLDTSSESYKRAQSVMADKLAELDTENGRLRAMGGEKAVARHRKRDKLTVRERI ELLLDPDTPFLELAPYAAWGTDFNLGGGIVGGIGVVSGVETLVIGSDPTDHGGTINPWTL RKQLRLMDIAQENRLPLISLVESGGANLPAQKDIFIPGGAQFRKLAELSKEGIPTIALVF GNSTAGGAYIPGMSDYTVMIDKKSKVFLAGPPLVKAATGEISDDESLGGAQMHAKVSGLA DYFATDEQDAIRIGRRIVARLNWKKEGQRPAYAAPPRLDEEELIGIVPEDLKIPFDPKEI IGRVVDDSDFDEFKPLYGQSLVTGWARIHGYPVGILANARGVLFSEEAKKATQFIQIANR QRTPLLFIHNTTGYMVGRTYEERGIIKDGAAMIHAVSTSEVPHLTLLVGASYGAGHYGMC GRAFNPRFVYAWPSAKSAVMGSQQLADVVTSVAAASAKARGIPFDEDANEMRREMIKNQI DSESLPLFLSGHIYDDGIIDPRDTRTVLGISLSAVSQEEIDSDRRYGIFRM >gi|294972467|gb|ADNU01000012.1| GENE 62 69613 - 71814 1450 733 aa, chain + ## HITS:1 COG:Rv0973c_1 KEGG:ns NR:ns ## COG: Rv0973c_1 COG0439 # Protein_GI_number: 15608113 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Mycobacterium tuberculosis H37Rv # 26 493 3 447 448 478 60.0 1e-134 MTTGAQVDAEARTEGHTEARAEARTIRSVLVANRGEIARRVFATCREQGIETVAVFSDPD EGLPFVAEADKAVRLPGKSAAETYLDGPAIIEAAHRTGADAIHPGYGFLSENAEFARAVM DAGLTWIGPSPEAIESMGSKVRSKELMDAAGVPILTNMEPDSITEADLPVLVKASAGGGG RGMRVADSMDALAETIESAKREAQSAFGDSTVFCERYIPAGHHVEVQVVGDMHGNVWAVG ERECSIQRRHQKVVEEAPAPLVERHGQELRDRLFQAAKDAATRIGYVGAGTVEFLADSNG EFFFLEMNTRLQVEHPVTESVTGVDLVALQLHVAQGGELVGEPPAQTGHSIEVRLYAEDP AEGWKPQSGPVHRFDVPGVDERFSTVRARRAVDNSGASIRLDAAYVDEAAFDGGASGGAS ANTGTEISPFYDPMIAKIISTADTRTRAATHLADALARMDWDGPTVNRDLLVQILRSDAF VQGNTDTNFLNEHEDVFSPVVSDHHIQIAATAAALALAATVERDQVTTASGHIVPQSATE LTGEESLARDIAQRNPRPHIGRFRLFADQPSARTFVTETGAEVAVATSQRRGTWVVENSE VDIAVKEARPERVVLEIDGVRTAYSVRVQGRRVTVNSSGASVVLVEAERFTDPALVAAPG SLLAPMPGVVSSVHVNVGDAVTTGQALLTMEAMKMEHTIHADADGSLKELPVSVGNQVEA GALLAVIEVEDNE >gi|294972467|gb|ADNU01000012.1| GENE 63 71807 - 72640 569 277 aa, chain + ## HITS:1 COG:MT0999.1 KEGG:ns NR:ns ## COG: MT0999.1 COG1024 # Protein_GI_number: 15840397 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 19 274 2 259 269 171 40.0 2e-42 MSESVSGGGVPGAGPLGGDSPVLYEVEGCVAHVTLDSPSNRNAISPALIDSLLEAFQAAE ENAQVRSVRLSHTGNTFCAGADLKATGTSVEAQRHMGEKMAQLLLAMLEHPKPIVAVVDG HVRAGGMGIIAAADSVFAGPAATFGLSEVRIGVTPALVSAVVLPRMTQRSASRWFIGGET FSAHEALEVGFITEVCSESEGDKSASGVAGQLEQAFAKSAPRAMAESKKLVNAPVVSKLV AERDALVELSCRMFMSEEARAGVQAFQKRQPAPWDVS >gi|294972467|gb|ADNU01000012.1| GENE 64 72677 - 73333 293 218 aa, chain - ## HITS:1 COG:no KEGG:REQ_36520 NR:ns ## KEGG: REQ_36520 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: R.equi # Pathway: not_defined # 18 206 1 190 204 172 52.0 1e-41 MVEKSGTRSQQSPSLSTVREPKQDRSRATQKRLLESTVSALSELGWTGATTSEIARRSGV SRGSLQHHFRTREELIVAALTYLFNERTTYLLEQVKNVGDQDRYSFVADLLFDLYVGELF SSSLQVWTAAMTDDKLRDLIVPLEERFARKAFGLAVNLLNADVSDEHTFRTVQVTLDLAR GLGLANVLTDDSDRRNKIKASWIRTLRTIKTKPQTHQP >gi|294972467|gb|ADNU01000012.1| GENE 65 73570 - 74088 543 172 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394638|ref|ZP_06804857.1| ## NR: gi|295394638|ref|ZP_06804857.1| hypothetical protein HMPREF0183_0355 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0355 [Brevibacterium mcbrellneri ATCC 49030] # 1 172 92 263 263 290 100.0 4e-77 MSLGKRIGNPVHLGGIGLVFVLLLGFWTGALTGLMFREGTESTPLTAGFLFTIAAFVVFF AVILAAPARWTLARPILSIFGWVLFFIVVIVVGVLWAQPVAMLPRMFVALAAVVLSVGGA VTAWVLAAQAKRKGSHDKTIVGHLRFLGFFTLIGTWAMALIMYFDIDISKYN >gi|294972467|gb|ADNU01000012.1| GENE 66 74468 - 75688 1082 406 aa, chain - ## HITS:1 COG:no KEGG:SGR_4305 NR:ns ## KEGG: SGR_4305 # Name: sprG # Def: putative serine protease # Organism: S.griseus # Pathway: not_defined # 38 405 37 403 406 190 38.0 1e-46 MKKKVLCTALAGAFTLSGLTIAQPAPVHADPKPAKTSPEVKHVDPSFSDEQVKIMAKSSG RSEAAQRAHLEKQTDQNNNLYDLNKKGHSYDGAFFDKNNSLVVQAPQGSTAEKDAKKAGL KVRQAKHGESKLNEIVNTLNKVKDRSDVSAVTPDVAKDRVVITVTKKNANSDLVKKAKQF GDAVELREGTPNQVQARASGGDKISMRSGGYCSAGFPATTSDGQKVMVWAGHCIEGQQSF FAQGSLFATQGRTAFRSYDGRPDRDLGYVVLSRGSELSTNVNTYGSGARISGSSRGAWQA PVGTDVCRTGATSGITCGKVTAYNSTVNYTDNAGRSVASVSGLGASTVCTAAGDSGGAYT SGGYAVGMTSGGPAAQRCGFNGGYVKGQSYFQPVTDALNYYGLAFG >gi|294972467|gb|ADNU01000012.1| GENE 67 75866 - 76021 144 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394640|ref|ZP_06804859.1| ## NR: gi|295394640|ref|ZP_06804859.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 51 1 51 51 90 100.0 3e-17 MKKLTVAVVSGLLVFGSASPVAAVTHEALQLPWFCYMGRPIIGICPAEMLK >gi|294972467|gb|ADNU01000012.1| GENE 68 76067 - 77278 769 403 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394641|ref|ZP_06804860.1| ## NR: gi|295394641|ref|ZP_06804860.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 7 403 1 397 397 741 100.0 0 MLYDLAMCKMGRGVRDESHTVRSSIIPLTLAGLFALSSLLDQSTYTLGLDAVIIVLVISA GIALMAVNPWITVGVCALAVIATVMVDVTFFGVAALLLPMTAGYMVVRGTQGAAYAFMLV VAVLLSGAVMTSEVSYEVLVSSVMFWVIAGVIALGGGHLVRHLLLREARIKERARLTLDE LRTELSRDLHDSIGGVLTRVSLLAQQARMSEPAKVAANLEQIVKETHFATGEIRVLLSRL RTLDDKIQGARPPRDIEQTCGDKVCAATTTTVEDIRCTILRFSNQLDAYGFAVEVYAAPS GISVLQNYSGVVNRLFHEALLNTVKYADPESPVRLIVDLNDNATVVFSNAIREDASCADS SGFGLASLARDFIAHGGSLTITRERSHEGKEQWVLLTQLPVAH >gi|294972467|gb|ADNU01000012.1| GENE 69 77242 - 77976 622 244 aa, chain + ## HITS:1 COG:BH2213 KEGG:ns NR:ns ## COG: BH2213 COG2197 # Protein_GI_number: 15614776 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus halodurans # 23 233 4 210 217 115 33.0 9e-26 MGFVDPAASRPLKDGVMTVSVTRVSVVDDDPLARKIICELLNAQNELSVVSSYDDGQALI DDLDRDTAPQTDVYLCDIAMPQLDGIDTTKAIRERGDTTPIMLLTSYDVEERFIQGMQAG ANGYLIKTSDISQIRAAILSIASGTAVFSPDAAGFSRAVVANEAPGQTPADLYGLTEREE AILTQLCRGQSNYEIARFLGISEGTVKVHITSIMKKANVRSRLELVVQAFNSGAVQPMRT DGYR >gi|294972467|gb|ADNU01000012.1| GENE 70 78046 - 79686 1440 546 aa, chain + ## HITS:1 COG:MT1331 KEGG:ns NR:ns ## COG: MT1331 COG0018 # Protein_GI_number: 15840742 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 546 1 550 550 513 48.0 1e-145 MTPEELKLAIEQAISAYNETHGTNVEVPAKLVVERPKNRDHGDWATNVALQTAKKTGLQP RELATGLAQILSDVDGIEKAEVAGPGFLNITLAAGAAGKLAADIVSAGREYGRGESLKDS TINLEFVSANPTGPLHIGHTRWAALGDAIGRVLKAAGATVTTEYYINDAGSQMDTFANSV LARMRGKDVPEGGYPGQYIADIARELLSRHPEWNDAKDEDIFEQVKDEAYKAQLKDISDT LESFGVHFDTWFSERTLHDTGAIAEAVERLREQGHVFENEGAIWLRTTDFGDDKDRVLVR SDGVPTYFAADAAYYLNKRDRGFEEKIYLLGADHHGYVGRLKALAATAGDDPNRNIEILI GQLISVNGARLSKRAGNIIELRDLVEWLGSDAVRYSLARTPADSPLALDPEVLKSASNDN PVYYVQYAHARAKSVERKATSAGVSTDSFDPATLQDPTEAALLSALADYPRVVAQSAQLR EPHRVARYLESLAGLFHKWYDACRVTPLGDDPVEPVHSSRLMLDMATATVLSNGLDLMGV SAPERM >gi|294972467|gb|ADNU01000012.1| GENE 71 79767 - 81125 706 452 aa, chain + ## HITS:1 COG:MT1332 KEGG:ns NR:ns ## COG: MT1332 COG0019 # Protein_GI_number: 15840743 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 2 440 9 445 447 414 51.0 1e-115 MPSLWSKHTVKKDGVLTVCGHSVQDVAHTFGSPVFVFDVDDFQTRARDFAESFDREFAAN GMTARGYYAGKAFLCTAVARWATEAGLGVDTCTLGEMLTARAAGVDPGRVGLHGNNKSDA ELEMAVSWGIGRIVVDSLDEIPRVERIAERCGVTAPVMVRVTVGVEAHTHDFIATAHEDQ KFGLSLASGQALEACKKVLKSPHLDLVGLHSHIGSQIFDAEGFILAATRVIRLRATLQRD FGAPVAEVDLGGGFGIRYTSQDTPSSFADMARKLARAVVRACEDEDTDLPNVSFEPGRAI VGPAAFTLYEVGTIKPVHTENGVRTYVSIDGGMSDNARTALYDADYSCTLANRRSDAEPI VVRVVGKHCESGDIVVRDEYLPSDVSAGDLIAVPDTGAYCKPLASNYNLVPRPGVLAVEE GRDPYWIVQPETYSDLFATDPGFDPALLEGDV >gi|294972467|gb|ADNU01000012.1| GENE 72 81122 - 82417 1122 431 aa, chain + ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 5 429 21 443 445 389 55.0 1e-108 MTLKVALLGAGTVGVEVARRILERPDELRDRIGDDLELTSVVVRDTSKERPGVPADLITA DAHVAIQGADIVVELMGGIDPAHDLILSALNSGASVVTANKALLAKHFAELFEAADNAQV RLEHEAAVAGAIPIIRPVGDSLAGDRITRVMGIMNGTTNYILDKMDTEGWSFDEALKTAQ ELGYAEADPTADVEGHDAAAKVAILASLAFHTPVTIDDVYVEGITSVTAEMVETARAQGF TIKLLGICEKLDDLGKVSARVYPALLPNSHPLSSVSGAFNAVFVEAEAAGELMFYGQGAG GAPTASAVLGDIVSVARRKVLGGRGQYERRARTILPVASLGDITTRYQTTLDVADRPGVL QAVTEVFANQEVSIELVQQSQYDDLEDGDSRAKLVIATHSATESALAQTVKNLNDLDVVR TIHSVLRIEGQ >gi|294972467|gb|ADNU01000012.1| GENE 73 82430 - 83503 1099 357 aa, chain + ## HITS:1 COG:TM0546 KEGG:ns NR:ns ## COG: TM0546 COG0498 # Protein_GI_number: 15643312 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Thermotoga maritima # 7 325 4 322 348 392 60.0 1e-109 MAHQWRGVINEYREYLDIDADTPVVSLGEGGTPLIFAEHLSDRVGANVHVKFEGMNPTGS FKDRGMTMAITKARAQGAQAVICASTGNTSASAAAYATKAGLTCAVLVPAGKIAMGKMSQ AIAHGATLVEVDGNFDDCLTLCRKLSEAYPVHLVNSVNPDRIEGQKTASFEIVDALGQAP DVHILPVGNAGNITAYWKGYKEYQTAGKAQSLPHMWGFQAAGAAPLVEGHPVDNPETIAT AIRIGNPASWKQAEAARDESGGLIDSVTDEQILEAHRVLSSTEGVFVEPGSAASIAGLLK MAQAGRIQAESTIVCTVTGHGLKDPQWALKAAGGDSIEPVKVSADVVSAASALGLEA >gi|294972467|gb|ADNU01000012.1| GENE 74 83505 - 84428 619 307 aa, chain + ## HITS:1 COG:ML1131 KEGG:ns NR:ns ## COG: ML1131 COG0083 # Protein_GI_number: 15827562 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Mycobacterium leprae # 14 297 22 303 315 158 40.0 1e-38 MLTIEVSAPATSANLGPGYDSFGLALDLCDNITAVLHDEPVDLNNCVTVSGEGEGQLPTT SDHLIHRVATTILRDRGIDVGDRLTLDCVNAIPQSRGMGSSAASVVAGISVADVISEHFD LPKPTAQDKLRWAIRFEGHPDNAAPALFGGVSVSWVDGEGQPVSASLPVHPSITTVLIVP DTCLDTQFARDLLPEFIPHEDAAANSACAGLLVHAIGNDPSLLFEATVDRLHQEYRRSAM PESLARVDALRDAGLAAVVSGAGPTVAVLGTEVDLLARCEEVLAGDESRMIAASIADSGV VVTSTPN >gi|294972467|gb|ADNU01000012.1| GENE 75 84680 - 86515 1567 611 aa, chain + ## HITS:1 COG:Rv1297_2 KEGG:ns NR:ns ## COG: Rv1297_2 COG1158 # Protein_GI_number: 15608437 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium tuberculosis H37Rv # 175 602 1 434 440 518 67.0 1e-146 MSETTQSEPVRSGSLTALRLPQLQEMAAGLGIKGYRRLRKSELIDAIQAAQSGNSAPKTS QEPVANKAPENAGDSREENTSQSEGRTRRRQRRDDSNNASADAQGKDNNAGDNNSQKSQD DNGRSRNGRRDGSNGRDGGNGRDNNRDKNGRDGNGRDNNRDKKNDDKSDRNGGNGRDGGR DNNRDNNDNQHGGDDDNHGRRGNRNRGRGRDRKRRGRDDEQDLRPDDVLIPVGGILDVHD NYAFLRTSGYLPGPNDVYVSANMVKRNGLRKGDAVTGAIRQQREGERPNKREKFDALVKL DTVNGLSVEDAKRRVEFSKLTPLYPQERLRLETEAKQISTRIIDLVSPIGKGQRGLIVAP PKAGKTTIMQQIANAIHTNNPDVHLMVVLVDERPEEVTDMQRAVQGEVIASTFDRPADDH TTISELAIERAKRLVEMGMDVVVLLDNITRLGRAYNLAQPASGRILSGGVDANALYPPKK FFGAARNIEGGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIYPAVD VNASGTRREDNLMSPEETKVMWRLRRVLAGLEQQQAIELLISKLKETGSNAEFLLQVQKT TPLPKSAADDA >gi|294972467|gb|ADNU01000012.1| GENE 76 86515 - 87594 910 359 aa, chain + ## HITS:1 COG:MT1338 KEGG:ns NR:ns ## COG: MT1338 COG0216 # Protein_GI_number: 15840749 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Mycobacterium tuberculosis CDC1551 # 11 355 7 354 357 371 58.0 1e-102 MDTDLSSVEASVRSLLDEHERIEAELANPDVHANAGLARKLTRRYSELDQIAKTYRELNQ CLSDVEDAKELASEDPAFAEEAKSLEERIEVLQDKLRELLIPKDPDDARDAIIEVKAGEG GDESALFAGDLVRMYQRWADHRGWSTEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFE GGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVN TTDSAVRITHLPTGIVASCQNEKSQLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQV RTVDRSERIRTYNFPENRIVDHRTGFKAYNLDQVLDGRLDDVVESARAADRAARLDDIG >gi|294972467|gb|ADNU01000012.1| GENE 77 87566 - 88489 238 307 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 5 297 13 292 294 96 31 6e-19 MRPDSTTLANADQLLRQSIQQLARAGIESPTADAKTLFAWAWDISVSELGSHVLRGTDVP REVKAQYARACESRAQRVPLQHITGVAPFRYLEMHVGPGVFIPRPETELMVTYAIEHLAG LPGDNHTAIDLCTGSGAIAIALATEVPRTHVHAVELSPDAALYTERNIERYRPTFEAHGS DVIPHLGDATEFLGATSAQVITCNPPYVARTVEHAPEVNSDPDLALYGGGKDGSELPQRI IAHAPRLLAPGGLFMCEHAEYNSRTVENAFHRAGFTNVETVGDYTGRDRFTRGYRALSGE DDRVSHI >gi|294972467|gb|ADNU01000012.1| GENE 78 88473 - 89129 537 218 aa, chain + ## HITS:1 COG:MT1340 KEGG:ns NR:ns ## COG: MT1340 COG0009 # Protein_GI_number: 15840751 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Mycobacterium tuberculosis CDC1551 # 1 208 1 208 217 189 50.0 4e-48 MSRTFDLANEQVRDLILEECARVVRGDGLLVIPTDTVYGIAADAFSPQGVAKLLQAKGRG RDMPPPVLVPRAETVMGLAEAVDSSVMELTARFWPGPLTIICNAQPSLHWDLGDTHGTVG LRMPDHEDTLALLSKVGPLAVSSANLSGEPAAVNVEQAQSMLGDRVDIFLDGGEAPGGQS STIIDMSGSVPRMLREGPISFDELAEVVDGLEPLAPEA >gi|294972467|gb|ADNU01000012.1| GENE 79 89133 - 90242 748 369 aa, chain + ## HITS:1 COG:ML1137 KEGG:ns NR:ns ## COG: ML1137 COG0472 # Protein_GI_number: 15827568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 1 361 31 395 399 244 42.0 2e-64 MRAYLFVMVVAAVVAYLVTPMVRRIAERGRIYSPLRTRDVHSVPTPRLGGVAMFCGVLAG VVCAYNTPFLQDLFQQPDPVIGILGAGTILCLLGVIDDIWDINWVAKLAGQTLAAGFMAL KGVALLSIPFDTVIIGSQRLSLILTVLVVLVTINAVNFVDGLDGLAAGVVTIGGIAFFVY TYQLAIDTSPTSYANLASLITSLLVGACLGFLPHNFNPARIFMGDSGSMLIGLLLAASTI RVTGQVDPALLSTERVLSTYLPILLPIAVMVLPLVDLMLAVVRRMAAGKSPFSADAKHLH HRMLALGHSHARAVLLLYMWTAIFAFGTVSLLKFQTSIVLSVLAVAVAVTLILTFYPLYS RLSARKELT >gi|294972467|gb|ADNU01000012.1| GENE 80 90239 - 90673 478 144 aa, chain + ## HITS:1 COG:no KEGG:CE1308 NR:ns ## KEGG: CE1308 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 7 132 44 169 171 69 34.0 5e-11 MKSTPIRNLMLRIIVWGLIASVVLAAVAGVIGYVAVGMPGLYSALIGAAVSFVFFSITAL VLLLTADMDPTVMAAGVLGGFLIKIAGFLGVIALLGDKGFYDRLTLFLTLVVGAVVSLSI DVVAVRKARIPYTHASEGKNQDKL >gi|294972467|gb|ADNU01000012.1| GENE 81 90901 - 91692 746 263 aa, chain + ## HITS:1 COG:Cgl1179 KEGG:ns NR:ns ## COG: Cgl1179 COG0356 # Protein_GI_number: 19552429 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Corynebacterium glutamicum # 9 262 3 268 270 191 45.0 1e-48 MLLAAGGGAEFHAPGLEEFNPPAILFAGTPFELNRIMLIRLGVTVVLLLAFWLMLRGGRL VPTRAQSIAEMVLDFCRTGIAHDMLGKKDGERFFPLIATIFLTVFAMNITGIIPFLNISP NSNIGMPLVMALVTYVFMIGAGIKAQGGARYLKSQLFPAGVPPLMYIIVTPIEIVSTFIA RPVSLTLRLTFNMIVGHLLLVLCFAATHFFFTSGSAALFGIGGLTLVGGFAFTLFEILVA VLQAYVFALLTAAYIQLSVSHDH >gi|294972467|gb|ADNU01000012.1| GENE 82 91781 - 92014 411 77 aa, chain + ## HITS:1 COG:Cgl1180 KEGG:ns NR:ns ## COG: Cgl1180 COG0636 # Protein_GI_number: 19552430 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Corynebacterium glutamicum # 13 75 18 80 80 69 68.0 2e-12 MDTSILAEVTGNIATVGYGLSAIGPGIGIGILVGKTVEGTARQPEVAGRLQTTMFLGIAF VELLAFLGIAAYFIFGA >gi|294972467|gb|ADNU01000012.1| GENE 83 92036 - 92590 669 184 aa, chain + ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 11 177 19 185 188 148 50.0 6e-36 MTPINVLAAGGNNPLVPALYDIVWSAVCFIIILVVFWKVILPKFKKTLDERAERIQGGIE KAEKVQAEADAALAEYQKQLADGRAEAARLRAEAQEEGAQILAETKQRATEEADRIISAA KAQIEAERQQAMNSLRTEVGSLATDLASRIVGESLQDDARSASVVDRFIADLENQTPAQT VKES >gi|294972467|gb|ADNU01000012.1| GENE 84 92590 - 93396 727 268 aa, chain + ## HITS:1 COG:Cgl1182 KEGG:ns NR:ns ## COG: Cgl1182 COG0712 # Protein_GI_number: 19552432 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Corynebacterium glutamicum # 1 267 1 271 271 91 26.0 2e-18 MLQSSRNSLALVLEDVNSTLNTASPKVIGDGLLGISGVLAENVNFRKTLVDVAVAPETKQ STLNAVFGTHVDDVALQIVVRAANRRFARAQDFVTAVETAGVTAIAAAAQAEGTLGQVEE ELFRFTRLLVSDHELDGAFESPAPATAKRELVSSLLASRVSEYTLTLIHYAVSHPRGKRV SETLENFSQVLAFRQQRAVADVTVAHPLTQEQEERLARALSASYGRELVLNVHIDPNVVG GVRVQVGDEVTSSTIADRIADVRRRLAS >gi|294972467|gb|ADNU01000012.1| GENE 85 93473 - 95107 1534 544 aa, chain + ## HITS:1 COG:MT1348 KEGG:ns NR:ns ## COG: MT1348 COG0056 # Protein_GI_number: 15840759 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 537 1 536 549 684 65.0 0 MAELTIRPDEIREALGKFVESYTPGSADKTEVGKVVTAGDGIAQVSGLPGTMANELLRFE DGTLGLAQNLDEREIGVVILGEFAGIAEEQNVYRTGEVLSIPVGDGYLGRVVDPLGNPVD GLGEIESEGRRELELQAAGVMDRKEVKEPLQTGLKSIDAMIPIGRGQRQLIIGDRKTGKT ALALDTIINQRANWESGDPKKQVRCIYVACGQKGSTIASVRRSLEENGALEYTTIVSSPA SDPAGFKYLAPYAGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPG DVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDVGAFIPTNVISITDGQIFLQSDL FNANQRPAVDVGISVSRVGGSAQTKPLRGVSGTLKISLAQYRSLEAFAMFASDLDAATKR QLDRGARLTELLKQGQFEPMSAEKQTVSIWAGSEGHLDEIPVSDVLRFESEFHAYLERKT DILETIAGMKDKLKGEILEQLETAIADFKAGFQATEDGVHVGTESFESAEAEEVSQEQIV KAKR >gi|294972467|gb|ADNU01000012.1| GENE 86 95139 - 96074 805 311 aa, chain + ## HITS:1 COG:MT1349 KEGG:ns NR:ns ## COG: MT1349 COG0224 # Protein_GI_number: 15840760 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 307 1 304 305 239 45.0 7e-63 MGAQQRVFKAKINSTKSLRKIFKAMELIAASRIQKAIGRVKAASPYANAITRAVSAVATH ADVEHTLTTEPETIRRAAVVVMGPDRGFAGAYSSNVIREAEELITMLKDDGKEVDLYVVG RKPETYYTFRERAIQRAWTGISESPTVEAAKEIGDILVSSFNTDYEAGGIDEIFLVYTRF VNSVTQTPEYRRLIPLEVVEADEVPADAPANVTSAKDVVYPLYEFEPNEEAVLDALLPKY IESRILAALLNASASEQAARQQAMKTATDNADDLIRTYTRLANSARQAEITQEISEIVGG ADALAGAGSND >gi|294972467|gb|ADNU01000012.1| GENE 87 96103 - 97554 1670 483 aa, chain + ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 1 479 1 480 483 649 69.0 0 MSTATDTPQVQGTVGRISRVIGPVVDIEFPLDAVPAIYNALTTTVELSEGTRKITFEVEL QLGNGIVRAVSMQPTDGLVRGQEVVDTGAPISVPVGDVTKGKVFNVTGDVLNDSMIDEPY EITERWPIHRTAPNFDQLESKTQMFETGIKVIDLLTPYVLGGKIGLFGGAGVGKTVLIQE MITRVAQDHGGVSVFAGVGERTREGNDLIHEMDESGVLDKTALVFGQMDEPPGTRLRIAL TGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQE RITSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGLYPAVDPLASS SRILDPLYVGQDHYDTAVRVKQILQKNKELQDIIAILGVDELSEEDKLTVHRARRIEQFL SQNTYTALQFTGVEGSTVSIKDTIEGFKGICDGEFDHIPEQAFFNVGPIEDVLRNYDELQ KEN >gi|294972467|gb|ADNU01000012.1| GENE 88 97558 - 97815 356 85 aa, chain + ## HITS:1 COG:PM1495 KEGG:ns NR:ns ## COG: PM1495 COG0355 # Protein_GI_number: 15603360 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Pasteurella multocida # 3 82 4 83 142 65 42.0 3e-11 MSLNVTVVAADRSVWSGEAERVVARTVEGEIGILTGHEPVLAIVAGGNVRITPTSGETIN VSADGGFLSVADDVVHVVADQAQLV >gi|294972467|gb|ADNU01000012.1| GENE 89 97837 - 98304 295 155 aa, chain + ## HITS:1 COG:no KEGG:SCAB_28741 NR:ns ## KEGG: SCAB_28741 # Name: not_defined # Def: hypothetical protein # Organism: S.scabiei # Pathway: not_defined # 7 152 7 152 152 77 33.0 1e-13 MNPSTLLIILLSLVGLAVVTVALILARRRAISRLTGAFDCSILVGDVSARRPRWRLGLAV LTVTSLDWYPVFGVGWRPVRQYPRTDMTIGQRLTPSGDEQYALLPDAKVAVCQYGQYASR PGEVRLAMDAEALAAFSSWLESPPPGANHSVGRFT >gi|294972467|gb|ADNU01000012.1| GENE 90 98388 - 99584 984 398 aa, chain + ## HITS:1 COG:MT1355 KEGG:ns NR:ns ## COG: MT1355 COG0766 # Protein_GI_number: 15840766 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 390 30 416 418 419 58.0 1e-117 MAATLLAPGTSVIENVPAILDVKIMVKLLMSLGCSVDYDSDAGVVAITVPETPEVRADYK LVRAMRASISVLGSLMGRVNEAHVALPGGDAIGSRGLDLHEAGLRAMGAQVSLDHGYFIA RAPQGLHGADIRLAFPSVGATENLVMAATLANGVTTIDNAAREPEIVDICSMLVAMGANI EGIGTSTLTVTGVESLHPVRHVCVGDRIVAGTWAFAAAITGGDIQINGVGGDLLPVVLDK LRSAGAQVTELEGGIHVSGPERPRPVRISTLPFPGFPTDLQPFAITLNAISDGQGLLTEN LFEARWRFVRELARLGAQVELDGNHALINGVESLSGAEVEASDIRAGAGAVLAGLVADGV TEVSGVSHIDRGYEYFEDKLRSLGAKVERIEREDVELS >gi|294972467|gb|ADNU01000012.1| GENE 91 99632 - 100300 688 222 aa, chain - ## HITS:1 COG:MT1363 KEGG:ns NR:ns ## COG: MT1363 COG1637 # Protein_GI_number: 15840774 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Mycobacterium tuberculosis CDC1551 # 1 222 13 226 226 294 66.0 1e-79 MNYAGRLTAHLPMAQRLLMLKADGSVLVHSDGGSYKPLNWMTPPATLTVDQPNDEQAQAG ITEVWNVNQTKTGDRLEIAIQTIHRDIEHDLGEDPGLLKDGVEAHLQELLAEHIETLGDG YTTIRREYQTPIGPVDILARDESGASIAVEIKRRGGVDGVEQLTRYLELLNRDPLIAPVK GVFAAQEIRPQARTLATDRGIRCVTLDYDALRGMDDPESRLF >gi|294972467|gb|ADNU01000012.1| GENE 92 100357 - 100659 171 100 aa, chain + ## HITS:1 COG:no KEGG:Krad_1276 NR:ns ## KEGG: Krad_1276 # Name: not_defined # Def: ATP/GTP-binding protein # Organism: K.radiotolerans # Pathway: not_defined # 1 99 4 97 100 75 42.0 5e-13 MPRSNSSRRSNKWQRPFRELSASSTVRTTQTGPDGTWIVQHTQGNSSGKIYVCPGCSQDL PASLAHTVAWRTDDEFGIGVGVETRRHWHTSCFNTRHRRR >gi|294972467|gb|ADNU01000012.1| GENE 93 100773 - 102239 1577 488 aa, chain - ## HITS:1 COG:no KEGG:Tcur_3894 NR:ns ## KEGG: Tcur_3894 # Name: not_defined # Def: hypothetical protein # Organism: T.curvata # Pathway: not_defined # 2 389 16 379 441 98 30.0 7e-19 MTPPEEFRTAMRGFEKSEVEGRIRQLKSEIDSLRKALQDARSQVITADRAKLQIAGELSE VKEQLKKATDDQSQAQSAPGSRIDHLLKIAESQARETLAQATADAETIRNKARADAASQR ARMHTESNDTLSNARSEADSIMQAAELRASEAVETAEKRAQELRQTSQREADTILGDAQA TANDQREALKHEISTGRADAEKEAARTLDVAKKEASKLVADARQSAEKLLSEARTEAQTV RAEAQKLKDEATKSSDDLKLELANQRQKHEQDQKALFEKTQAESKKTLEEAQARAKKADT EAREAAERAEVTRKEAIEQADKIIADGRQRARSLMSEARQTAEATIEESAAEAKRNVSAA QSQVDLLTKQRRTITAQLQQLQSMFAAPGLFDGLDLSDDKSDKVKAAAAPTEKIGSEEEL EELRKSVATKKPEDTSANTAEAGKQADKPGDKQDSKSADKPEAEQGNKPNLKLGSSSADK QGTNPGNI >gi|294972467|gb|ADNU01000012.1| GENE 94 102429 - 103607 1460 392 aa, chain + ## HITS:1 COG:ML1158 KEGG:ns NR:ns ## COG: ML1158 COG0183 # Protein_GI_number: 15827585 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Mycobacterium leprae # 1 389 1 391 393 396 60.0 1e-110 MAEAVIVAGARTPLGKMSGSLASLSSVDLGGHAIKAALERAGVAPDKVEYVLMGQVLQAG VGQGAARQAAVKSGIPMTVPAVTLNKLCLSGINTITHAAMLVRSGEYDVVVAGGQESMTN APHMLEKSRAGYKYGNVTVRDHMDYDGLWDAFTDQAMGGLTESANEGDTEFNREEQDAFA AQSHQRAAAAKDKLAEEIAPITISSRKGDTVVDADEGVRGDSTAESLSKLRPAFRKEGAI TAGNASQISDGAAAVVVMNKDKAVEAGLPILAEIRSHAWTAGPDSTLQHQPSQAIKAAAE REGVAADSFDLYEINEAFAAVSLASMKDLGIDDSKVNVNGGAVSLGHPIGASGARIVLTL ALELQRRGGGLGVAALCGGGGQGDALIVKVGE >gi|294972467|gb|ADNU01000012.1| GENE 95 103607 - 103930 270 107 aa, chain + ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 100 17 114 117 114 61.0 3e-26 MLVAFSVAPSGGPDPDGDGGVHDAVAEAVKVVRASGLPHRTDAMFTTIEGEWDEVFAVVK EATEAVARFGPRVSLVLKADIRDGRTGELDGKLERLEKAIDESCNGK >gi|294972467|gb|ADNU01000012.1| GENE 96 103955 - 104662 549 235 aa, chain + ## HITS:1 COG:no KEGG:AARI_03680 NR:ns ## KEGG: AARI_03680 # Name: not_defined # Def: site-specific recombinase # Organism: A.arilaitensis # Pathway: not_defined # 8 196 48 236 547 296 76.0 3e-79 MATNTSETKYHKDKADAIERQWLDLTRKLAAEGGWAVMGEYIDNDSASKSAARTRKGWRQ LNQDIKAEKVSALAFWNLDRTNRIAAKTIEWIAQCQQVGVYLVSHQDSADELNTATAGAK LVTGIKALLAEVETDAMSEWQLASKRHLAEAGFIHGGTLPFGWQAGPRVVDEFGCSGVRF ESHPVEHPALKDAVDMGSGRGARGHIVNDLDNCTVENAAVDLHFDAVWTGMDLSH >gi|294972467|gb|ADNU01000012.1| GENE 97 104546 - 105748 795 400 aa, chain - ## HITS:1 COG:BS_yhaZ KEGG:ns NR:ns ## COG: BS_yhaZ COG4335 # Protein_GI_number: 16078046 # Func_class: L Replication, recombination and repair # Function: DNA alkylation repair enzyme # Organism: Bacillus subtilis # 78 384 1 350 357 166 28.0 9e-41 MPYLSLPSIRRLTERAFSRHAEVSGRLGLTVREEARFVRAEAPVSGRPHTSEARMKCMNE KAAAAVRAGAEPRRDRTLADFKDELSPELVKRLSSEIARASASFDRTAFEQCAIEGLEGR ELMARMEWIAHALTETMPPAPEDADQVVRAALADGGLQGWASMPVNAYVARAMLDRPDIG LPLLAALTPRYTAEFAIRPFIADPTPTLELLDALVDDESLYVRRSVANHLNDIAKDHPNL VLDTAKRWAATTTQGDFVVRHGLRTLIKRGHPEALTILGFDPAVPIEITNLTCTPSTVAI GEAVTISFTLQAAAATKAAIDYVVHYQGARGLKAGKVFKLSVKDLPAGKSVVLSREHRFG HVSVRKIHPGPHRIEVQVNGRVLDGAVVEVVDDVTSGTSA >gi|294972467|gb|ADNU01000012.1| GENE 98 105986 - 107356 1001 456 aa, chain - ## HITS:1 COG:mll2542 KEGG:ns NR:ns ## COG: mll2542 COG0477 # Protein_GI_number: 13472297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 10 422 9 423 505 260 39.0 4e-69 MSAQRKTGALVAVVLGFFIVMLDTTIVNVALPDMAATLNTQVVTLQWVVDSYTLVFAALL LTAGAACDRLGARKVYIFGLITFGVLSIACALAPNGPALIIARALQGIGAAAVVPGSLAL LATIYPDPAERSRAIGLWGGAGGIAAACGPVLGGALVSVIGWQAVFWVNVPIIAFGCWLT MRSIGVPPHDRTRRLDPAGQLISITALVAITYAVITSGEQGWNPPRLGLLLFGVALVAVF VWVEHRHPDPMLPTVLFRKPRFTVAAVVGFALNVSFFGQLFVLSLYFQTYRGYEPLLAGL ALAPQACSAVIASPLGGRVAARIGPFPTMLIGLCIGTIGFGSLIVLTGTTPYPLIAVLSF IAGFGMAFTMPAATSAAVAAAPPSHTGVAGGVINAARQTGSIFGIAVLGAMIAGSTGFLP GFHQAVATASGVFAFAAALVVLILLTTREPTSESAA >gi|294972467|gb|ADNU01000012.1| GENE 99 107405 - 108064 473 219 aa, chain - ## HITS:1 COG:TM0528 KEGG:ns NR:ns ## COG: TM0528 COG0223 # Protein_GI_number: 15643294 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Thermotoga maritima # 55 207 48 200 313 79 33.0 7e-15 MTTRFVLITEANSLFGYEFLRRLLADERSVLSAVITRTPGVLCDYYLDDDVQVDVAADAR ANGVDVYQAEDPNAPEIVEAMRTLAPDYIIVANYQLQVGRALRDVPTVDIINFHPSPLPR YAGLAPYFWMAKNHETQGGVSAIRMSAGLDDGPLIAQQLLSLRGDETADEIRSSHFEASW RLFELVLPTLHDRSYRSWPQDLSLRTYYGAPPQRVLSTA >gi|294972467|gb|ADNU01000012.1| GENE 100 108061 - 108939 794 292 aa, chain - ## HITS:1 COG:MT2401 KEGG:ns NR:ns ## COG: MT2401 COG0476 # Protein_GI_number: 15841842 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Mycobacterium tuberculosis CDC1551 # 17 276 21 267 318 99 30.0 8e-21 MSKERQQYRGTYDDDFYWERVNRNLGWLGDTTEEQRARQEKLRDSVIGVVGTGGIGGAVA ARLVRMGALNLKLADPDHFDLTNVQRQYGAGRDTIGRNKAEVVAEQVYGLTGDVNIDVFP EGITPDTAEGFMDGCDYVMDQMEFFQIKNRYALHRAFRASDRCKFMFKIPTVAHSTIIFT YTKESMPIEEVYDVPEDTEFTPEVTRRLMERIMPEYQDFPSQETLEEWFVKNQTMPIFGA CPPLAEGVLVERLAQEIMDLPGRVPLPVQPGYALFDTLTWQSKLVEKAWWAQ >gi|294972467|gb|ADNU01000012.1| GENE 101 109003 - 109740 273 245 aa, chain + ## HITS:1 COG:BMEI0150 KEGG:ns NR:ns ## COG: BMEI0150 COG0640 # Protein_GI_number: 17986434 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Brucella melitensis # 16 228 21 234 243 130 39.0 2e-30 MDTEQSGVHTERMDTRTFPEALPDISRTAAALADPSRAAMCAALMDGRAWTVGELARYCG LARSTASEHVDLLTARGLVLDVRQGRHRYVRLAGGDIAHVIESLGIVAQSTFDTAHSLRA SSATDRARAGRTCYKHLAGRLGVALAEQLQDRGCLTDTWEPTAAGREVLSAWGLPHAQSV TATPCMDSTERRFHLAGPLGKELCTVFFDKGWIERLGASRAVRLTDAGTTALANAGIRLL TAVAS >gi|294972467|gb|ADNU01000012.1| GENE 102 109788 - 110366 397 192 aa, chain - ## HITS:1 COG:no KEGG:Ksed_06750 NR:ns ## KEGG: Ksed_06750 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 76 376 451 487 121 80.0 1e-26 MRTDQAARDIRKKKTEYVSDAAQRARIGQIEDASQRAEYQDVLQQEADLTAGHGVLRYTG PLSVSAPTVAELDAAVAAIEQAETARTTLRLLAEATRHVDDPDQLYAVIDDIRGGVQALQ ETLAQLADAHMLCQARAISLNGDPARRQNRGDDDATARRTRIVRHDKPHDDIEVTVCVHD AFTESIVSTKRH >gi|294972467|gb|ADNU01000012.1| GENE 103 110786 - 111019 57 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPQPSATDKSATHGNRAVSSLALVLGAYGLGASKNVIADILPEFSNLCQDCSLRCRFAPR LRICILLIHVPSHDLES >gi|294972467|gb|ADNU01000012.1| GENE 104 111460 - 112965 1347 501 aa, chain - ## HITS:1 COG:Cgl2185 KEGG:ns NR:ns ## COG: Cgl2185 COG0557 # Protein_GI_number: 19553435 # Func_class: K Transcription # Function: Exoribonuclease R # Organism: Corynebacterium glutamicum # 65 462 35 438 475 263 40.0 5e-70 MQVRILLGALALLYAGGMFQRRFRIQRSAAQRLQSAYDELASDLPHDFPAPVLEETRSAI EDLADPFATGRDGLDSDKQDYTHVPFVTIDPPGARDLDQAMHLSQDSTETGTFTVMYAIA DVGRFIEPGGPLDQETRTRGQTIYLPDRKIPLHPKELSEDAASLLPEQTRSAYVFTAKVA TDGKLTDYTLERAVVRSRAQLDYTTVQHEWEQGQDLHPSIALLPQVGEALLADARSRGAI DLAIPDQEVTDTLTLQYRPRGGIEDFNAQISLLAGRIAAQLQIQAGTGILRTLNFPDEET VEKFHAIVRTLGFEPRDTYQETLRSIDHLGNDPRALAVHYASPMLFRGAGYTLVGTDPDP VQAAVGAPYAHATAPLRRLVDRFVLPIAEAAARNAPTPSVDGLEDIISIMKSTGSVASRI DKDAIETTEAVLLSGRIGEEFIGVVVGHKKRDDSPVLNVHVPDPAVVVDVKGEAPVGQEV RIRLESVQDNTPVFTIADHDL >gi|294972467|gb|ADNU01000012.1| GENE 105 113283 - 113582 233 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394679|ref|ZP_06804898.1| ## NR: gi|295394679|ref|ZP_06804898.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 99 1 99 99 176 100.0 6e-43 MSEENAQRAKSMEAIFAPSIRGFVDGSLVRRMTAYSLDLTTRRRWFETDNLSATARSHVF GENHLGQEYEHLWISVSRGATAGFEEGNSAENAKLNMSI >gi|294972467|gb|ADNU01000012.1| GENE 106 114010 - 114261 311 83 aa, chain + ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 78 35 112 117 92 61.0 2e-19 MHDAVVEAVKVVGASGLPHCTDAMFTTFEGEWNEVFAVVKETTEAVARFSSRVSLVLKAD IRDGRTGELDGKLERLEKANDES >gi|294972467|gb|ADNU01000012.1| GENE 107 114484 - 114762 336 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394681|ref|ZP_06804900.1| ## NR: gi|295394681|ref|ZP_06804900.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 92 1 92 92 160 100.0 2e-38 MSDIKHFLLVFDHSKNELILEKDFGTDIDSATDEYARQEQAYRDSNVIDIVLIGSDSIET VKVTHSTYFEKGHRGQRLNRLDELSNYLHTFA >gi|294972467|gb|ADNU01000012.1| GENE 108 114755 - 115333 265 192 aa, chain - ## HITS:1 COG:Cgl1151 KEGG:ns NR:ns ## COG: Cgl1151 COG2357 # Protein_GI_number: 19552401 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 6 122 53 177 210 62 31.0 5e-10 MLLINNQLRYHAQATHVDAKVSQRLKRENTIIDKITNRESKIDLSRMVDIGGLRVVVPSM DDLVKYHKAVAVALNEQVTATKDYVANPRPSGYRAIHLHLKRDGVQIEVQLRTQLMHAWA ELVESMSSITSTNLKQDSSGTRLHSIAKDLAEVYSQLDQGVLRPEEADQKRESALQEMAE EILNMSEGTHNE Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:53:37 2011 Seq name: gi|294972453|gb|ADNU01000013.1| Brevibacterium mcbrellneri ATCC 49030 contig00014, whole genome shotgun sequence Length of sequence - 13240 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 8, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1119 950 ## COG2409 Predicted drug exporters of the RND superfamily 2 2 Tu 1 . + CDS 1507 - 2829 990 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 3 3 Op 1 . + CDS 2945 - 4075 846 ## AMED_1475 hypothetical protein 4 3 Op 2 . + CDS 4059 - 5675 1654 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 5 3 Op 3 . + CDS 5693 - 6442 582 ## Bfae_00700 hypothetical protein 6 3 Op 4 . + CDS 6516 - 7730 1181 ## COG3853 Uncharacterized protein involved in tellurite resistance - Term 7907 - 7953 0.5 7 4 Tu 1 . - CDS 7978 - 8991 692 ## Sros_0865 hypothetical protein + Prom 8497 - 8556 2.8 8 5 Tu 1 . + CDS 8624 - 9502 625 ## Mbar_A3063 hypothetical protein + Prom 9712 - 9771 3.1 9 6 Tu 1 . + CDS 9893 - 10618 422 ## COG1432 Uncharacterized conserved protein 10 7 Op 1 . - CDS 10628 - 11473 757 ## gi|295394694|ref|ZP_06804912.1| hypothetical protein HMPREF0183_0410 11 7 Op 2 . - CDS 11527 - 11757 342 ## Mlut_00680 hypothetical protein - Term 11834 - 11874 7.1 12 8 Tu 1 . - CDS 11899 - 13185 1327 ## COG0502 Biotin synthase and related enzymes Predicted protein(s) >gi|294972453|gb|ADNU01000013.1| GENE 1 3 - 1119 950 372 aa, chain - ## HITS:1 COG:Cgl0608 KEGG:ns NR:ns ## COG: Cgl0608 COG2409 # Protein_GI_number: 19551858 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Corynebacterium glutamicum # 27 355 7 346 712 120 33.0 5e-27 MTTSTNSRSFADRLTSRRGAWITLGVSLLILVALFGVFGKAKAPVGTNLAPADSESAHAA QLMEKFPEADRGTILVVASRDDGAELTENQLAQLKDLLPVLDNHLGAESNGPLPSEDKKA ALLVTDMQVSEASTENAEVVNGLRATLADKVPAGMSLQVTGGPAFGADVAGAFDGANFLL LSITIGIVAVLLILTYRSPILWLLPLFAVGMADGLAGRVTAATGAAWDLQFDAGIISVLV FGAGTNYALLLISRYREELVRTPNHRTALSNAWRGTVPAILASNFTVVLALLILVVAVIP STRGIGIASAIGLVIALAAVLFLLPPLLAISGRKAFWPFIPKPEQNAATPDTPATTSGST RATTQNTTTQKR >gi|294972453|gb|ADNU01000013.1| GENE 2 1507 - 2829 990 440 aa, chain + ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 46 432 32 412 414 240 36.0 4e-63 MTQNSKPEPSTGAVKPSTHRPIEPDAEALESAISQLSTYTDSAQGGWTRQVLSEPYKAAR EFVANRMKSAGLEVRTDGAGNIIGRLPGLASEGGARLKPLVTGSHTDTVASGGRFDGIVG VLGAIEMVEAMRRVGRRFERDLIVIDFLGEEANDFGTMCVGSNTLVGGVTPAMLDYTDPN GTKFGDALTRFGVDPNAALNNAWQPGSFHAYIELHIEQGPQLERHNTQIGVVTAITGISR FIAQFSGRTDHAGTTPMDVRHDALMAAAASALTVERVTCGAPNHGVGTVGRMDAWPGALN VVPGRATLEAEFRSVDSDWLGVAKRNIAEQIAQEAQARGVEVDIEWLETMEAVPTVPAIR DEIANAAQTAGLTWEAIPSGAGHDAQHMAALGPMGMIFVPSVDGRSHCPEEFSHTSDIAN GVSVLAATLARLDAMDVIRQ >gi|294972453|gb|ADNU01000013.1| GENE 3 2945 - 4075 846 376 aa, chain + ## HITS:1 COG:no KEGG:AMED_1475 NR:ns ## KEGG: AMED_1475 # Name: not_defined # Def: hypothetical protein # Organism: A.mediterranei # Pathway: not_defined # 40 372 35 358 358 267 43.0 7e-70 MKNKTIAAVAGATIIVVLVAVLGIAVASRFGFSIFGKPKTEVTAVVGSEKEAFFKDPRVV EAFANKGFTVKVTTAGSLAMAQNEATTNNDFAFPSSESSGQAVQKAFKDKARNTYTPFFS PIAIATFEPVVQVLAKNGVAHENQGIWEIDMAKYLELVKENKRWSDLKDNKAYKPQRNVL ITSTDIRKSNSAVMYMTLASYVLNNNSVVTDKGAAESQVDDLSKLFLNQGYAQGSSAAPF ERYLSRGMGEAPMVIAYEGQFLGEETAQNSRIRDNMVLAYPSPTVFSTHTAVTFTENGDK VMELLSNDEELAKLLAEHGFRSNGPHSAAFDNWVQEKNLSDRYRPAGDFVELAQIPSSEI TTFLVDNIGRRYDLAK >gi|294972453|gb|ADNU01000013.1| GENE 4 4059 - 5675 1654 538 aa, chain + ## HITS:1 COG:Cgl1370 KEGG:ns NR:ns ## COG: Cgl1370 COG2304 # Protein_GI_number: 19552620 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Corynebacterium glutamicum # 51 537 41 524 525 262 35.0 1e-69 MTWPSRSATSTKTKGWHIIRTLIAVLTVGMLTFVTAACDGGGFGGKGSGDLKVLAGSEVK DLEPILNDMAKEIGVSFDITYAGTLEGTEKLVKEGQGDFDLTWFPSNYYLSLFEQSKSLV GEEKSIMSSPVVLGLKPEKAKQLGWSEDKQPAWADVAKAAEKGDLKFGMTSPLSSNSGFS TVLEAATALSGSGNALQTKDVEAATEGLSKFSKGTSLTSGSSGWLAEAFAKDQSKADGIF NYESVLKGMDFGGQPPVLIAPSDGVVTADYPLTLLDGADDTTKENFNKVTEYLLSDEVQQ RITDETHRRTKVSNPDEFPTTFETPYPATLDTVQKLLEAWVANGRKPATMFFQIDTSGSM RGERLEQLKTALGILSGTSAKNDTERFLAIQPREKLKLVEFSHEVKSTDGYRLTDNGSAD KVRKDLDTKIQTLTAEGGTAIYSTLQTTLESAKKEKSDDKITSVVVFTDGMNEHGISFRA FKDWYSNNQDVQDIPVFAVSFGNADSDELQELVSLTGGRVFDGNADLTAAFKDIRGYL >gi|294972453|gb|ADNU01000013.1| GENE 5 5693 - 6442 582 249 aa, chain + ## HITS:1 COG:no KEGG:Bfae_00700 NR:ns ## KEGG: Bfae_00700 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 106 249 153 298 298 120 49.0 8e-26 MFAGASGVLLGATSAVLGLGSFAGAVGVAGVAVAAGGAMAAAVGVFLHAITPAPSLLVTT SDGVNESTATILENVLNSTRNIRRKLDEWRGELPRIERNLRAQGGAGAASGGGAASGRYG GASRPAEVLDQLAGILTRIDGLAQTEAVQERDPSDGDLLMLEGIACRYIPELMDAVDDTF DFLAKFSGGALKDVQNNLETIHSEFGVMSETLEQLEQDVVRGVSHSLEVHSEFLRRRLKA SDSPSIIDI >gi|294972453|gb|ADNU01000013.1| GENE 6 6516 - 7730 1181 404 aa, chain + ## HITS:1 COG:DR1127 KEGG:ns NR:ns ## COG: DR1127 COG3853 # Protein_GI_number: 15806147 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tellurite resistance # Organism: Deinococcus radiodurans # 3 386 26 398 416 199 33.0 1e-50 MTLQPPEPAPAPVAEPPVEEVKDDKALGMLEPLDQAVSTELSQRAEKWLNTVSALNPHSQ EFQTQIIAIGNVARKTFESTARTSSRFMEKSMRDAKAEGSKSQQQVSSSLLELRTVMNDL APSDKTFAQKALGWVPGFNAVKKYFNSFESNQKQLNSVLRSLDAGQEQLQRDNAELAVER RNLWEDLHELQRAEGLLEQIDGQVVGKIESLKSEGQAEQAGILEKDLLFAVRQRRQDIQT QIAVTIQSYLSMGIIDANNRQLIQGVDRAKTTTVTALRTAVITAEALENQKLVLDQIDAV NKTTNDLINRTSDMLAQNSVRTQKQAVESGVAVETLNRAFDSVFKTMDGIDQFRIEANKN FAQTIDVLKAQVDRAQPYLERQNGNAQVDELVSDPNNAQNLLEM >gi|294972453|gb|ADNU01000013.1| GENE 7 7978 - 8991 692 337 aa, chain - ## HITS:1 COG:no KEGG:Sros_0865 NR:ns ## KEGG: Sros_0865 # Name: not_defined # Def: hypothetical protein # Organism: S.roseum # Pathway: not_defined # 159 329 1 171 179 153 48.0 9e-36 MFFTNIAMNGTATAPLRALRPTPLNVAMPEPTPATLDSTQMTGYTNSASTYHFHDCLNLG FHRPGALTCFVTRATTTSRNGVISQTSEPSESTEFGCPRSSLIPTPIHPLANVTIVIPIN QFMTSPPPELRVRAPHSHMSMRYVYQIYLSDTRGTLDVMAHVILGLLLLGNMSLYDLIKA MEQGTSLFYSASAGSIKRALDGLLKRGDVHVVSQETTGRKRKIYGITPQGRTTFHAWMMS PPENADLDAAALTRIYFLGLLDEPERVTVLESIRDAVSRSATTLEHTQDQVKGQSVPAEL ASIAHYTKATLEYGIRTHDTALTWLEELIAQAQADVK >gi|294972453|gb|ADNU01000013.1| GENE 8 8624 - 9502 625 292 aa, chain + ## HITS:1 COG:no KEGG:Mbar_A3063 NR:ns ## KEGG: Mbar_A3063 # Name: not_defined # Def: hypothetical protein # Organism: M.barkeri # Pathway: not_defined # 9 263 14 270 289 166 34.0 9e-40 MNWFIGITIVTLASGWIGVGINELLGQPNSVDSLGSLVWLITPFLLVVVARVTKQVSAPG RWNPRFKQSWKWYVLALLVYPVICVLSSVAGVGSGIATFNGVGLSALSGAVAVPFIAMFV KNICEESVWRGFFVGEMDRRVSDWLVYAVSGGVWGLWHLPYYLFFLPEEQMRTVMDVSRP VFALFACGVMVLWGVLFAELFRLAGSIWPLVLLHAVEDVTVNPLVMEGHLVIRPGFEWLI SPVVGILPALCLFGLGLALRWYRVNRVCGSETSPRSSSLPRTSDRSEQAAAV >gi|294972453|gb|ADNU01000013.1| GENE 9 9893 - 10618 422 241 aa, chain + ## HITS:1 COG:NMA2192 KEGG:ns NR:ns ## COG: NMA2192 COG1432 # Protein_GI_number: 15795062 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 4 210 1 213 219 155 40.0 8e-38 MRAITTAILVDGGFYRQRALRLFGKKTPEDRAKELAEYCRRHIVASQASLYRVFYYDCPP SEKVVFHPLTGEHVNLAKSDQYRWVQSFHQQLVRKRKFAFRRGEELESQSHFSLKYDKLK KLCSGKISVSDLKPEDFDLDITQKGVDMRIGLDIASLAERRLVNQIVMISGDSDFVPAAK HARRSGIDFILDPMWAKITDSLNEHIDGIRECVRAEPQNRNDPLHVEYRSESELDTCEDD Y >gi|294972453|gb|ADNU01000013.1| GENE 10 10628 - 11473 757 281 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394694|ref|ZP_06804912.1| ## NR: gi|295394694|ref|ZP_06804912.1| hypothetical protein HMPREF0183_0410 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0410 [Brevibacterium mcbrellneri ATCC 49030] # 1 281 1 281 281 517 100.0 1e-145 MSLKYDLENVDTELPIDGGVAAFDPVSLRLAAQALSDRGGTVHLLPNVAGTQSPILTRLA TVAAEPAEGIPTSVVATVDTRRLRWDRGSFTPEAIDFTDYTGATKYGVDLGRLSVADMGD TRVTCVDMLTENDESLTVWFAELPNELTSADARALTDLALRTRESWEGAERYTALVTIPA QQLTYVASPQVSHVDDWDLTGVLQKFAAAFDETGARVIAQTAMFASAALTPPPERTFGER GPVVLWFTEKGAEVPFSIIYTSSPAWLKAGTKVDIDGLQLP >gi|294972453|gb|ADNU01000013.1| GENE 11 11527 - 11757 342 76 aa, chain - ## HITS:1 COG:no KEGG:Mlut_00680 NR:ns ## KEGG: Mlut_00680 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 75 1 75 75 68 52.0 1e-10 MSEKLFEHETEEFMTREQAAKKLRELADAIERQNEVRVQVGDHDVTVDVPDTVSYEYEIE VKQGGKSEIEVKLAWK >gi|294972453|gb|ADNU01000013.1| GENE 12 11899 - 13185 1327 428 aa, chain - ## HITS:1 COG:BS_bioB KEGG:ns NR:ns ## COG: BS_bioB COG0502 # Protein_GI_number: 16080072 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Bacillus subtilis # 1 320 11 329 335 322 49.0 9e-88 MLAGTPATSEQGLAILRTADEDLLDIVAAAARVRRKHFGMTVKVNYLVNLKSGLCPEDCG YCSQRLGSDTEILKYSWLSTKDATRQATFGMEGGAGRVCLVASGRGPSNRDIDRVGEITK SIKDNNPQLEVCACLGFLKDNQAERLKEYGVDAYNHNLNTAESNYEEICSTHTFEQRTDT VKKAKAGGLSPCSGLIVGMGESDEQVIEAIDSLRELDSDSIPVNFLIPFEGTPMEGVHHL TPQHSMRILAAVRFMCPDKELRIAGGREMHLRTLQPLSLHVANSLFLGDYLTSEGQDAIA DLDMIVDGGFSILGQEDTKALRDQILASKNAHLAAVNGAQGGTEVGGAGGSGAGGAAGSG LPCAGGAAGGAGIAGQPGAVPAGTSAEVATGAAPTSAGCPKSRGEVPGTPTVPVIRRRGA GTDLPPNA Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:54:15 2011 Seq name: gi|294972450|gb|ADNU01000014.1| Brevibacterium mcbrellneri ATCC 49030 contig00016, whole genome shotgun sequence Length of sequence - 1763 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 18 - 1448 978 ## Mvan_0459 transposase, IS4 family protein 2 1 Op 2 . - CDS 1482 - 1649 143 ## ROP_72370 transposase Predicted protein(s) >gi|294972450|gb|ADNU01000014.1| GENE 1 18 - 1448 978 476 aa, chain - ## HITS:1 COG:no KEGG:Mvan_0459 NR:ns ## KEGG: Mvan_0459 # Name: not_defined # Def: transposase, IS4 family protein # Organism: M.vanbaalenii # Pathway: not_defined # 17 469 84 538 545 545 62.0 1e-153 MTTESLVQEDGGQAALLDPEPPVVRRAPAGRVAATPAGILRDVLTTAYQQLGFDRVDDAV FRDLVVARIVEPTSKRDAPRVLHELGLDAVSYATIKRSLGRIQEQDYRDQIARACFAYSA ATTGLSLLLYDVTTLYFEAKKEDSYRKVGYSKERRVDPQIVIGLLVDRTGFPLEIHSFEG NKAETHTMIPVIKAFQDRHNVADMVVVADAGMLSAKNLQDLDDAGLRFIVGSRQTKAPQD LAKYFHWHGTHHEDGLTVDTITMRRSAPDPDRVRCRAEPVWDPETDTDKWRAVWQYRHKR ALRDQATLNQQRNRAIAIIDGQRAPKKARFVREKGGKKELDEASYTRAMQLVGWKGYSSN IPASIMPAAEVVSSYHDLWHVEQSFRMSKTDLAARPIFHRVRESIEAHLTIVFTALAVSR YVQTHTGLAIGNVVKRLRPLRSATIEINGTQQTFPPHIPAKEKTIIDSIMNGKLTH >gi|294972450|gb|ADNU01000014.1| GENE 2 1482 - 1649 143 55 aa, chain - ## HITS:1 COG:no KEGG:ROP_72370 NR:ns ## KEGG: ROP_72370 # Name: not_defined # Def: transposase # Organism: R.opacus # Pathway: not_defined # 1 53 1 53 422 76 73.0 3e-13 MVFIRRVRTKSGATAVQVAEYSRGRQRIIKRIGSAHTEAELGVLLAHARGWIDDG Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:54:29 2011 Seq name: gi|294972433|gb|ADNU01000015.1| Brevibacterium mcbrellneri ATCC 49030 contig00017, whole genome shotgun sequence Length of sequence - 13923 bp Number of predicted genes - 18, with homology - 16 Number of transcription units - 10, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 34 - 657 163 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Term 660 - 707 -0.7 2 2 Tu 1 . + CDS 766 - 996 99 ## + Term 1183 - 1225 3.3 3 3 Tu 1 . - CDS 1292 - 1516 95 ## + Prom 1346 - 1405 6.1 4 4 Tu 1 . + CDS 1425 - 3650 1049 ## Bfae_15770 HNH endonuclease - Term 3623 - 3670 3.1 5 5 Op 1 . - CDS 3707 - 4624 523 ## COG3346 Uncharacterized conserved protein 6 5 Op 2 . - CDS 4624 - 4833 58 ## Ksed_13480 hypothetical protein 7 5 Op 3 . - CDS 4830 - 5222 246 ## AARI_15920 hypothetical protein 8 6 Op 1 3/0.000 + CDS 5353 - 6057 810 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 9 6 Op 2 . + CDS 6079 - 6837 905 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) 10 6 Op 3 . + CDS 6906 - 7391 388 ## COG2062 Phosphohistidine phosphatase SixA 11 7 Op 1 . - CDS 7439 - 8212 546 ## COG0560 Phosphoserine phosphatase 12 7 Op 2 . - CDS 8217 - 8972 357 ## gi|295394709|ref|ZP_06804925.1| conserved hypothetical protein - Prom 9096 - 9155 2.5 + Prom 8848 - 8907 2.5 13 8 Op 1 . + CDS 9001 - 9783 848 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 14 8 Op 2 . + CDS 9780 - 10553 715 ## COG0730 Predicted permeases 15 8 Op 3 . + CDS 10550 - 11431 185 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 16 9 Tu 1 . - CDS 11590 - 12213 189 ## Ksed_23390 hypothetical protein 17 10 Op 1 4/0.000 - CDS 12400 - 12735 456 ## COG1937 Uncharacterized protein conserved in bacteria 18 10 Op 2 . - CDS 12747 - 13922 1112 ## COG2217 Cation transport ATPase Predicted protein(s) >gi|294972433|gb|ADNU01000015.1| GENE 1 34 - 657 163 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 5 180 9 202 305 67 30 5e-11 MTGSGLSKSYGSTEVFMDVDLAIDRGSRVVILGFNGAGKTTLLKILAGLEAPDTGEVKAG HGLKLGYYAQEHETLDLDRTVLENMRSNAPDLDDTQVRTVLGSFLFSGDEVNKPAKVLSG GEKTRLALATLVVSSANVLLLDEPTNNLDPASREEILSAIRRYEGAIILVTHDEGAVQAL DPDRVLLLPDGDEDHWNDSYLDLVSLA >gi|294972433|gb|ADNU01000015.1| GENE 2 766 - 996 99 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTASYPRCVVNSFGLYDGVAGLAPSVARIELFELAAAGLAFAVASVEFAGAFRSRKCCLP LRSGSSAQVRLASLPR >gi|294972433|gb|ADNU01000015.1| GENE 3 1292 - 1516 95 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMRVVFLTVSNSSTAGPSCRSLRVWVCVVVMWVHLLVYPYSICVRMRKSSVLFILFLFMF EQVFSRTHTKTGTS >gi|294972433|gb|ADNU01000015.1| GENE 4 1425 - 3650 1049 741 aa, chain + ## HITS:1 COG:no KEGG:Bfae_15770 NR:ns ## KEGG: Bfae_15770 # Name: not_defined # Def: HNH endonuclease # Organism: B.faecium # Pathway: not_defined # 534 643 175 285 360 84 41.0 2e-14 MTTTHTHTRNDLHDGPAVELFETVKNTTRIMDEAQVKQAEAVAAVISAHITPLDDFTHGL HAVFTSNPGAGPLVTNGTTSSSNAGPSAFGSVGVDDVVACVALPSGEVATVASVERVADE LPTPTEGVLAKLLDCTRSQLVTRVRKIMTAVVLMPKLWSLAKAGVIGFDRVLYTVGRVGR AGVCIPVFDDMLTNKRVDVPWKTYRRHVNEILAMLMTPETRVENARRNRGVSYWVNDDGT ATWSLTGPVLEMEAFYQRVRGTARAILAIHIEAFSVRLTDEQQALFITEGNGDTTEVRVG DLGRVEVDDDRLIDQLTLDLITGAKPSTTLRVRVVPTGKHAPITVTNTKDTFDPGVPGAE SDGAFEAGGPGTDTRSDAGGPGSGDADGSVWAEKREARQAENVYELELCVSMPEKEEWLK AQAGITVTIPVLHFLTHLPPPSTERRPEEQRPERRRFGKDPGPDRSGPGNQGTGVPPETD APPGSEETLNPEEFLNTAERVSVGEPLGAGAPVGAGRELDYGLPIKVDPDARVPVMMNNR VPLDAKTADELIAQAKWAYRMFTDPQTGVVLESTPTKYYIPPALKRMVEARHPDCSVPWC ATPARVCEKDHIEPFNHQDPENGGLTVMENLHPLCKRHHQEKTQKRLRVDKMDDGSLARV FPRIGAMLVYPPESRINQLQYERLLEYFDTGDQDISHTINQYQATEHQTARSTETEATHS PGEVFNGDTRPWEPSEEPPPF >gi|294972433|gb|ADNU01000015.1| GENE 5 3707 - 4624 523 305 aa, chain - ## HITS:1 COG:ML1644 KEGG:ns NR:ns ## COG: ML1644 COG3346 # Protein_GI_number: 15827867 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 2 251 1 252 270 108 31.0 2e-23 MLRNYSFVASSAWIRYIVLALVAATLCAFLAMWQNDRRQQRDAEIATIESNYNASPVDFA DAVEGTSAELRHEDEWTKVEVRGRYEPQLTVLARNRTVNNQPGFYVIVPFTTSSGSQVLV NRGWVPAPSTGAASPDQVPQPPSGETTVTGWLRPTEDGSKDNNPDGIIRAIDTERVPGLS DPYEHVFVQMGAEDPAGEEGLSPLPAPSLDPGSHLSYTFQWITFGVMILIAIVFTIVREK KTRESSQDKPTTYVVVDKDALKHGSASGTRYGTSLHRTRDSATRRARRSVRDEEAEDAEL NQQGL >gi|294972433|gb|ADNU01000015.1| GENE 6 4624 - 4833 58 69 aa, chain - ## HITS:1 COG:no KEGG:Ksed_13480 NR:ns ## KEGG: Ksed_13480 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 69 1 69 69 86 53.0 4e-16 MTELVCSAKACRAVAVHALLWNNPSIHVASRTKVWLACDEHRDFLSEFLSLRGFLRSVVS VDEIPEGAG >gi|294972433|gb|ADNU01000015.1| GENE 7 4830 - 5222 246 130 aa, chain - ## HITS:1 COG:no KEGG:AARI_15920 NR:ns ## KEGG: AARI_15920 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 2 68 24 90 151 71 47.0 9e-12 MSKEQTVRVTDAQHSHEAESNGRMRQYTVLMAIRLTCFFVAALTSGWVRWTAAAGAIVLP WVAVTIANTVRRHFYTDKDEIAGAPTPQALDDEPAEDVEDEEPDVVIGEVVGVLESPRES QRSRDEETDA >gi|294972433|gb|ADNU01000015.1| GENE 8 5353 - 6057 810 234 aa, chain + ## HITS:1 COG:MT1530 KEGG:ns NR:ns ## COG: MT1530 COG1028 # Protein_GI_number: 15840944 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis CDC1551 # 3 234 16 247 247 250 58.0 2e-66 MPRTVLVTGGNRGIGRTIAEQFIAQGDRVAVTSRNGDAPEGALAVAADVTDSASLDAAYT TVENELGPVEIIVANAGITRDNLLMRMSDEEFEDVINTNLTGVYRTVRRGITNLIRAKWG RIILISSVSGLYGVAGQANYSSSKAGLVGLARSITREVGSRGITANVVAPGFIRTDMTDE LPEAKQKEYLQAVPAKRFAEPQEVAKVVSWVASDDASYISGAVIPVDGGLGMGH >gi|294972433|gb|ADNU01000015.1| GENE 9 6079 - 6837 905 252 aa, chain + ## HITS:1 COG:MT1531 KEGG:ns NR:ns ## COG: MT1531 COG0623 # Protein_GI_number: 15840945 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Mycobacterium tuberculosis CDC1551 # 2 249 3 266 269 234 46.0 2e-61 MGILEGKRILVTGVLTESSIAFAAARLAQEQGAEVILSSFGRQMKITTIIAERLPKPAPV IELDATSEEDLAALPERLGGNIDGIVHAIAFAPKDALGGVFLDTPFESVSTAIHVSAYSL KSIAVAAKSVLNPGAGIVGLTFDATVAWPAYDWMGVAKAAMESTSRYLAKYMGPDKIRVN LVSAGPLKTTAAKSIPGFEAFEDVWGDRAPLGWDQTDTEPAGKAIVALLSDWFPATTGEM VHVDGGLHSTGA >gi|294972433|gb|ADNU01000015.1| GENE 10 6906 - 7391 388 161 aa, chain + ## HITS:1 COG:XF1085 KEGG:ns NR:ns ## COG: XF1085 COG2062 # Protein_GI_number: 15837687 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Xylella fastidiosa 9a5c # 1 125 2 119 159 59 35.0 2e-09 MPTLVLARHAHATHDPMPDFDRHLTEEGEAEAALAGRFLSQFALTHLVSSPAKRTTQTGQ AVVDALNDAYRGRPDFKQVELQFEPALYDATVQTWLDTINAIPENVPGAYIVGHNPIVWE TVERVGGVSLKKFKPSSVAVFQLPSWDVDSFPEPTVRYFGN >gi|294972433|gb|ADNU01000015.1| GENE 11 7439 - 8212 546 257 aa, chain - ## HITS:1 COG:YPO0442 KEGG:ns NR:ns ## COG: YPO0442 COG0560 # Protein_GI_number: 16120773 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Yersinia pestis # 22 252 84 314 326 171 45.0 1e-42 MQRVCIFDSGQVRHDVFDTDDLPPVLADLRSENDDVQVLPPEVSLAPPELVVMDVDSTLI NEEVIDLLAAHAGVENQVVAITERAMAGELDFEESLRERVALLEGIPVSALAEVADQVTL TPGVPEWVEALHEVDCHVAVVSGGFIDIVQPLADGVGIDDAFANQLESSGGVLTGQVTGP VVDRAFKAQTLAELAGRVGATRTLAVGDGANDLDMVELASCGIAFCAKPALAEKADLVIR HRDMRQLVEIFCTPYVR >gi|294972433|gb|ADNU01000015.1| GENE 12 8217 - 8972 357 251 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394709|ref|ZP_06804925.1| ## NR: gi|295394709|ref|ZP_06804925.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 3 251 1 249 249 449 99.0 1e-124 MRVHNQRVFHTVHVATALNACVERTLPPDSVVTIFQDAGFEVPFINEDAVLDESRTGLLL WAAAARERGFDRFRAVLVHPALALTVPQVAREHSRVVAQAPAVIVAEVAGESRAVLVVHA EGNVDVFPCAHVPFAPLGMRSVPEAVRHLRDVVMQGLSLVERGIADEFRNLPWRDWQEEF AGEHRRAGSFFVDSTVEAACFSAVDIHCALRPVLAPLAVEPQELGSLLAQLHAAAHDVVT TTTRESAAPIR >gi|294972433|gb|ADNU01000015.1| GENE 13 9001 - 9783 848 260 aa, chain + ## HITS:1 COG:MT3126 KEGG:ns NR:ns ## COG: MT3126 COG1119 # Protein_GI_number: 15842605 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Mycobacterium tuberculosis CDC1551 # 4 253 21 270 287 251 53.0 9e-67 MSEVLSLEDVVVRRGAHHLLDGLSLSVSEGQHWVILGPNGAGKTTLLEIAAGRMHPTSGT VKILGEQLGRVDVFELRPRIGYASSALADRLPRSETAFDAVMTAAYGVVGRWTEKYEQID EERAHDLLNVFGIGDFKDRAFGSLSEGERKRVQIARSLMTDPEILLLDEPASGLDLGGRE DLLQALFEILGGKYAPTTLMVTHHVEEIPKGTTHALLLRDGKVTVAGPLEETLTSENLSE TFGSDIKLTTVGGRFHAHAQ >gi|294972433|gb|ADNU01000015.1| GENE 14 9780 - 10553 715 257 aa, chain + ## HITS:1 COG:ML0468 KEGG:ns NR:ns ## COG: ML0468 COG0730 # Protein_GI_number: 15827152 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Mycobacterium leprae # 9 255 7 260 260 186 47.0 3e-47 MTFDLLTSALIFLAGLAAGTINAVVGSGTLITFPALVAFGVPPQAATMSNALGLIPGNIA SSFGYREDLRGSGDRLKRWIPASMAGSLVGATLLVVLPAKSFELIVPVLIVIALVMVVVQ PRLQKYLKARDATALTNSTVAVYCILFFTAIYGGYFAAAQGIILIGLLGIVLDEPLQKIN GYKNVLVLFVNIVSAAAYTVIGFNKISWMAVVLIAAGSLIGGYVGARVGRKLNPTALRAV IVILGIVAFVRILGIHA >gi|294972433|gb|ADNU01000015.1| GENE 15 10550 - 11431 185 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 109 293 61 247 255 75 26 2e-13 MNTPKKADLGPADIEALCEKHGIDPARVQHLAHVPPPEDYTQLTDVELRKKLEPENGLFI SESSKIIQRAHDAGMKFRSFFLNAHWLEPLAPVIAHHDVPIYVGSEADLEKVAGFRLHRG ALASTQRPHLPSVAEVVRDTSVVVIIEDLVDHTNVGAIFRSVAALGADAVLVTPRCADPL YRRAIRVSMGTVFQVPWTRIDPWPESIDTFQDAGFVVAGMTLGEGAITLDELVAEDYEKL ALVFGSEGPGLTQATEQRLDRRVTIPMMGGVDSLNVAAASAIALYATRLRHKR >gi|294972433|gb|ADNU01000015.1| GENE 16 11590 - 12213 189 207 aa, chain - ## HITS:1 COG:no KEGG:Ksed_23390 NR:ns ## KEGG: Ksed_23390 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 12 206 7 204 205 180 51.0 4e-44 MPLAIVTPIHPSRSRLRLCATMTALATSAVLLLSGCADAEPSVDAGSDHSLVAEHDLDGL NARDVIKRLDTAKVSDRSSELIASIEPEQLVLTDDQNRQTTLPMPKDEFYVSIAPYRGQT HECYFHSLTTCRGELANTDVDVTVVEATSGRTILDETLRTYDNGFVGIWLPRGIDASLTV SAEGRTAKQDISTRADDPTCLTGFQLT >gi|294972433|gb|ADNU01000015.1| GENE 17 12400 - 12735 456 111 aa, chain - ## HITS:1 COG:Cgl0381 KEGG:ns NR:ns ## COG: Cgl0381 COG1937 # Protein_GI_number: 19551631 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 13 111 3 100 100 108 59.0 2e-24 MTTDTATNDTGGDTETHQHGYISDKARYRSRMKRIEGQARGIAKMIDDEKYCIDILTQVS ALTRALQGVATGLLDDHLKHCVLDAAKQGDEDAAIAKIQEASDAINRLVRS >gi|294972433|gb|ADNU01000015.1| GENE 18 12747 - 13922 1112 391 aa, chain - ## HITS:1 COG:Cgl2900 KEGG:ns NR:ns ## COG: Cgl2900 COG2217 # Protein_GI_number: 19554150 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 1 379 332 717 739 395 61.0 1e-109 TAVAWTLFGLPNDAVIRTITVLVIACPHALGLAIPLVVSIATERAARGGVLVKDRLALES MRQVDAVLFDKTGTLTKGEPTVTGVEPIAGLDAEQVLALAAAAEANSEHPLAQAIVAAAK DKSLTVEPASGFSSSPAVGVTATVVGQEIRVGGPRLLEETGQHEIDAAEEWRAAGAIILH VLRDNTVIGGLKLADEVRPESRDAVDALHELGVEVVMITGDAEAVANEVGRELGIDRVFA GVRPEDKSAKVDQLQKEGKKVAMVGDGVNDAPALAQSDIGIAIGAGTDVAIASAGVILAS SDPRSVLSVIQLSRAAYRKMKQNLWWAAGYNLLSVPLAAGVLAPVGFVMPMSVGAILMSI STVVVALNAQLLRRIDLTPDASTRSVLERQK Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:55:53 2011 Seq name: gi|294972313|gb|ADNU01000016.1| Brevibacterium mcbrellneri ATCC 49030 contig00018, whole genome shotgun sequence Length of sequence - 134020 bp Number of predicted genes - 119, with homology - 117 Number of transcription units - 51, operones - 30 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 3 - 76 76.8 # Pro GGG 0 0 + Prom 265 - 324 1.8 1 1 Op 1 . + CDS 421 - 1245 676 ## COG1716 FOG: FHA domain 2 1 Op 2 . + CDS 1248 - 1715 512 ## COG1259 Uncharacterized conserved protein 3 1 Op 3 . + CDS 1731 - 3107 1174 ## COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 3130 - 3160 0.3 4 2 Op 1 . - CDS 3136 - 5028 1659 ## COG0515 Serine/threonine protein kinase 5 2 Op 2 . - CDS 5025 - 6125 537 ## COG1388 FOG: LysM repeat 6 3 Tu 1 . + CDS 6230 - 6562 348 ## AAur_1696 hypothetical protein 7 4 Tu 1 . - CDS 6591 - 7655 843 ## COG0142 Geranylgeranyl pyrophosphate synthase + Prom 7576 - 7635 1.5 8 5 Op 1 . + CDS 7680 - 8960 797 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 9 5 Op 2 . + CDS 8976 - 9374 301 ## Achl_1561 membrane protein + Term 9407 - 9459 0.7 - Term 9263 - 9305 -0.7 10 6 Op 1 . - CDS 9377 - 11506 1993 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 11 6 Op 2 . - CDS 11503 - 12639 503 ## Arth_1209 hypothetical protein 12 6 Op 3 . - CDS 12639 - 13589 814 ## COG0714 MoxR-like ATPases 13 7 Tu 1 . + CDS 13522 - 13692 58 ## + Prom 13702 - 13761 1.8 14 8 Op 1 29/0.000 + CDS 13899 - 14330 369 ## COG2001 Uncharacterized protein conserved in bacteria 15 8 Op 2 . + CDS 14485 - 15456 684 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 16 9 Op 1 . + CDS 15564 - 15962 252 ## gi|295394732|ref|ZP_06804947.1| membrane-fusion protein 17 9 Op 2 26/0.000 + CDS 15976 - 17760 1417 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 18 9 Op 3 26/0.000 + CDS 17747 - 19222 1201 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 19 9 Op 4 28/0.000 + CDS 19237 - 20682 1158 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 20 9 Op 5 28/0.000 + CDS 20832 - 21770 841 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 21 9 Op 6 25/0.000 + CDS 21763 - 23268 1219 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 22 9 Op 7 31/0.000 + CDS 23271 - 24527 900 ## COG0772 Bacterial cell division membrane protein 23 9 Op 8 26/0.000 + CDS 24520 - 25674 1057 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 24 9 Op 9 . + CDS 25671 - 27029 1064 ## COG0773 UDP-N-acetylmuramate-alanine ligase 25 9 Op 10 . + CDS 27026 - 27715 415 ## gi|295394741|ref|ZP_06804956.1| cell division septal protein 26 10 Op 1 5/0.000 + CDS 27837 - 28988 1246 ## COG0206 Cell division GTPase 27 10 Op 2 . + CDS 29108 - 29776 342 ## COG1496 Uncharacterized conserved protein 28 10 Op 3 12/0.000 + CDS 29835 - 30323 495 ## COG1799 Uncharacterized protein conserved in bacteria + Term 30339 - 30383 11.5 29 11 Op 1 5/0.000 + CDS 30392 - 30691 333 ## COG0762 Predicted integral membrane protein + Prom 30694 - 30753 2.7 30 11 Op 2 . + CDS 30793 - 31548 929 ## COG3599 Cell division initiation protein + Term 31586 - 31634 15.0 + Prom 31575 - 31634 2.4 31 12 Op 1 15/0.000 + CDS 31667 - 32161 492 ## COG0597 Lipoprotein signal peptidase 32 12 Op 2 2/0.067 + CDS 32161 - 33087 235 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 33 12 Op 3 . + CDS 33138 - 36629 3132 ## COG0587 DNA polymerase III, alpha subunit 34 12 Op 4 . + CDS 36692 - 37999 749 ## COG0141 Histidinol dehydrogenase 35 12 Op 5 . + CDS 37999 - 38466 293 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains + Term 38552 - 38605 14.5 - Term 38524 - 38551 -0.1 36 13 Op 1 . - CDS 38630 - 39295 360 ## gi|295394752|ref|ZP_06804967.1| conserved hypothetical protein 37 13 Op 2 . - CDS 39358 - 41544 1443 ## COG3973 Superfamily I DNA and RNA helicases 38 13 Op 3 . - CDS 41636 - 42394 371 ## COG0421 Spermidine synthase - Prom 42573 - 42632 2.5 + Prom 42911 - 42970 1.6 39 14 Tu 1 . + CDS 43069 - 43644 357 ## gi|295394755|ref|ZP_06804970.1| hypothetical protein HMPREF0183_0468 + Term 43666 - 43714 2.1 40 15 Tu 1 . + CDS 43759 - 45165 1599 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 41 16 Tu 1 . - CDS 45194 - 45820 547 ## COG3324 Predicted enzyme related to lactoylglutathione lyase 42 17 Tu 1 . - CDS 45934 - 46782 706 ## COG0860 N-acetylmuramoyl-L-alanine amidase 43 18 Tu 1 . + CDS 46854 - 48956 1441 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Prom 49016 - 49075 3.5 44 19 Op 1 31/0.000 + CDS 49124 - 50695 1566 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 45 19 Op 2 5/0.000 + CDS 50705 - 51739 1089 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 46 19 Op 3 . + CDS 51754 - 55011 183 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Term 54919 - 54961 7.4 47 20 Tu 1 . - CDS 55025 - 55963 670 ## Jden_1413 hypothetical protein 48 21 Tu 1 . + CDS 56079 - 57176 1035 ## COG0276 Protoheme ferro-lyase (ferrochelatase) + Term 57188 - 57236 2.0 - Term 57036 - 57081 4.0 49 22 Tu 1 . - CDS 57191 - 57493 373 ## gi|295394765|ref|ZP_06804980.1| conserved hypothetical protein 50 23 Op 1 . + CDS 57468 - 57674 133 ## 51 23 Op 2 . + CDS 57684 - 57986 264 ## Krad_4064 hypothetical protein + Term 58012 - 58046 0.1 52 24 Tu 1 . - CDS 58005 - 58454 409 ## Arth_1635 membrane protein - Prom 58535 - 58594 2.2 + Prom 58459 - 58518 2.7 53 25 Op 1 . + CDS 58560 - 58976 356 ## COG0756 dUTPase 54 25 Op 2 . + CDS 58982 - 59776 918 ## SCAB_24011 hypothetical protein + Term 59915 - 59946 0.0 - Term 60037 - 60078 3.2 55 26 Op 1 1/0.267 - CDS 60091 - 60744 762 ## COG0569 K+ transport systems, NAD-binding component 56 26 Op 2 . - CDS 60741 - 61412 582 ## COG0569 K+ transport systems, NAD-binding component 57 27 Op 1 2/0.067 + CDS 61543 - 63462 1800 ## COG0531 Amino acid transporters 58 27 Op 2 . + CDS 63459 - 64712 705 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 64724 - 64783 4.1 59 28 Tu 1 . + CDS 64869 - 67556 3053 ## COG1048 Aconitase A + Term 67572 - 67609 8.4 - Term 67548 - 67608 20.3 60 29 Tu 1 . - CDS 67655 - 68539 779 ## gi|295394776|ref|ZP_06804991.1| VPDSG-CTERM exosortase interaction domain protein + Prom 68769 - 68828 2.4 61 30 Tu 1 . + CDS 68861 - 70798 1637 ## COG1154 Deoxyxylulose-5-phosphate synthase 62 31 Op 1 . - CDS 70803 - 71960 916 ## COG0349 Ribonuclease D 63 31 Op 2 . - CDS 71963 - 72697 312 ## AARI_19830 hypothetical protein 64 32 Op 1 3/0.067 + CDS 72696 - 73742 770 ## COG0407 Uroporphyrinogen-III decarboxylase 65 32 Op 2 2/0.067 + CDS 73739 - 75148 795 ## COG1232 Protoporphyrinogen oxidase 66 32 Op 3 . + CDS 75145 - 75849 710 ## COG3253 Uncharacterized conserved protein 67 33 Tu 1 . - CDS 75899 - 76285 453 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase - Prom 76519 - 76578 2.2 + Prom 76265 - 76324 2.4 68 34 Tu 1 . + CDS 76370 - 77563 1132 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 77688 - 77723 2.3 69 35 Op 1 . - CDS 77582 - 78358 595 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 70 35 Op 2 . - CDS 78355 - 79146 602 ## COG3786 Uncharacterized protein conserved in bacteria - Prom 79203 - 79262 1.6 71 36 Tu 1 . + CDS 79230 - 80198 717 ## Cfla_1373 hypothetical protein + Term 80302 - 80349 3.1 + Prom 80220 - 80279 1.6 72 37 Op 1 . + CDS 80378 - 82138 1848 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 73 37 Op 2 4/0.000 + CDS 82162 - 82863 536 ## COG1381 Recombinational DNA repair protein (RecF pathway) 74 37 Op 3 . + CDS 82860 - 83636 465 ## COG0020 Undecaprenyl pyrophosphate synthase 75 38 Op 1 35/0.000 - CDS 83633 - 85378 221 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 76 38 Op 2 . - CDS 85375 - 87120 213 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 77 38 Op 3 . - CDS 87133 - 88893 1851 ## COG0513 Superfamily II DNA and RNA helicases - Prom 89005 - 89064 2.6 + Prom 89004 - 89063 2.0 78 39 Op 1 . + CDS 89137 - 90513 1412 ## COG0423 Glycyl-tRNA synthetase (class II) 79 39 Op 2 . + CDS 90582 - 91646 946 ## COG5438 Predicted multitransmembrane protein 80 39 Op 3 16/0.000 + CDS 91740 - 92492 596 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 81 39 Op 4 31/0.000 + CDS 92503 - 93390 1179 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 82 39 Op 5 17/0.000 + CDS 93445 - 94107 619 ## COG0765 ABC-type amino acid transport system, permease component 83 39 Op 6 . + CDS 94104 - 94934 939 ## COG0765 ABC-type amino acid transport system, permease component + Term 94950 - 95003 11.5 84 40 Tu 1 . - CDS 94939 - 96288 1111 ## Nwat_1557 L-lactate permease + Prom 96281 - 96340 2.1 85 41 Op 1 . + CDS 96419 - 96964 536 ## Bcav_3583 hypothetical protein 86 41 Op 2 . + CDS 96991 - 97923 713 ## COG1131 ABC-type multidrug transport system, ATPase component 87 41 Op 3 . + CDS 97920 - 98699 609 ## AARI_29060 putative ABC drug resistance transporter, inner membrane subunit 88 41 Op 4 19/0.000 + CDS 98710 - 99768 620 ## COG4585 Signal transduction histidine kinase 89 41 Op 5 . + CDS 99765 - 100373 462 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 90 41 Op 6 . + CDS 100427 - 101602 513 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 91 41 Op 7 3/0.067 + CDS 101603 - 102883 900 ## COG0232 dGTP triphosphohydrolase 92 41 Op 8 . + CDS 102898 - 104775 1289 ## COG0358 DNA primase (bacterial type) + Term 104878 - 104917 -0.8 93 42 Op 1 19/0.000 - CDS 104778 - 105392 454 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 94 42 Op 2 . - CDS 105389 - 106573 784 ## COG4585 Signal transduction histidine kinase 95 42 Op 3 . - CDS 106575 - 108050 1035 ## COG0554 Glycerol kinase 96 42 Op 4 . - CDS 108053 - 109486 1645 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 97 42 Op 5 . - CDS 109575 - 110612 1113 ## COG1295 Predicted membrane protein 98 42 Op 6 . - CDS 110623 - 111675 1141 ## COG2326 Uncharacterized conserved protein 99 42 Op 7 . - CDS 111745 - 113562 1601 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 113608 - 113667 3.0 100 43 Op 1 . + CDS 113771 - 116599 2774 ## COG0495 Leucyl-tRNA synthetase + Term 116631 - 116668 4.2 101 43 Op 2 . + CDS 116690 - 117517 562 ## COG0171 NAD synthase 102 44 Op 1 . - CDS 117544 - 117897 228 ## gi|295394819|ref|ZP_06805034.1| camphor resistance protein CrcB 103 44 Op 2 . - CDS 117891 - 118265 153 ## gi|295394820|ref|ZP_06805035.1| camphor resistance protein CrcB 104 44 Op 3 . - CDS 118265 - 118930 578 ## gi|295394821|ref|ZP_06805036.1| conserved hypothetical protein - Prom 118955 - 119014 1.8 105 45 Tu 1 . + CDS 119058 - 120368 1306 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 106 46 Tu 1 . + CDS 120557 - 121261 523 ## COG1307 Uncharacterized protein conserved in bacteria 107 47 Op 1 7/0.000 + CDS 121364 - 122101 515 ## COG1555 DNA uptake protein and related DNA-binding proteins 108 47 Op 2 10/0.000 + CDS 122103 - 124298 970 ## COG0658 Predicted membrane metal-binding protein 109 47 Op 3 . + CDS 124344 - 125321 694 ## COG1466 DNA polymerase III, delta subunit 110 47 Op 4 . + CDS 125417 - 125848 420 ## gi|295394827|ref|ZP_06805042.1| conserved hypothetical protein 111 47 Op 5 . + CDS 125848 - 126162 306 ## COG1846 Transcriptional regulators + Term 126191 - 126240 13.2 - Term 126181 - 126226 13.7 112 48 Op 1 . - CDS 126250 - 126510 302 ## PROTEIN SUPPORTED gi|62426402|ref|ZP_00381530.1| COG0268: Ribosomal protein S20 - Term 126592 - 126637 1.0 113 48 Op 2 . - CDS 126672 - 127343 570 ## Sked_13320 hypothetical protein 114 49 Op 1 4/0.000 + CDS 127459 - 129315 2025 ## COG0481 Membrane GTPase LepA 115 49 Op 2 . + CDS 129316 - 130524 974 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Term 130516 - 130555 9.1 116 50 Op 1 . - CDS 130576 - 131244 592 ## COG3296 Uncharacterized protein conserved in bacteria - Prom 131286 - 131345 2.4 - Term 131292 - 131329 -0.4 117 50 Op 2 . - CDS 131349 - 132194 618 ## Sked_13390 hypothetical protein - Prom 132256 - 132315 2.9 + Prom 132194 - 132253 1.7 118 51 Op 1 3/0.067 + CDS 132286 - 133287 791 ## COG1420 Transcriptional regulator of heat shock gene 119 51 Op 2 . + CDS 133319 - 134018 574 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain Predicted protein(s) >gi|294972313|gb|ADNU01000016.1| GENE 1 421 - 1245 676 274 aa, chain + ## HITS:1 COG:ML2076 KEGG:ns NR:ns ## COG: ML2076 COG1716 # Protein_GI_number: 15828122 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium leprae # 178 268 56 146 162 105 59.0 8e-23 MSQPNQPTGQGDSWYQEDSGQKAKKFPLGGPANEDSPNGGAQNHDVPSQQQDVPPQAQPQ PNANPFNPFGGPNQEAPAPQQASAPQQGSAPHQASTPQRGTTPGPYGGGIDPQAGSSEQA LHQSFEPAPSGANERTDQHQPAQQAPAQQHDNVPGIYDPRTGEVMPVADLNRLQDTDALL VVVSGPDAGAQILLDTDVVTVGRSPNADIFLDDVTVSRKHAEFVRTPSGFTLRDTGSLNG TYVGRQLIDSVELRNGADVQIGKFRMIFQQRPRQ >gi|294972313|gb|ADNU01000016.1| GENE 2 1248 - 1715 512 155 aa, chain + ## HITS:1 COG:MT1877 KEGG:ns NR:ns ## COG: MT1877 COG1259 # Protein_GI_number: 15841299 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 5 154 3 161 164 118 45.0 3e-27 MVHIEVEVVGIRVEMPANQRVLLLKGVDVPKFLPIWIGAQEANAIGIAERGWEPPRPLSH NLLVDIIEAFGTELDRVVITHRDGHIIYSELHLSDGKVISARPSDAVAMALISQCTIETT QELLDDIGIDAPQADEEEVAQFREFLDHVSPEDFD >gi|294972313|gb|ADNU01000016.1| GENE 3 1731 - 3107 1174 458 aa, chain + ## HITS:1 COG:Cj0716 KEGG:ns NR:ns ## COG: Cj0716 COG3200 # Protein_GI_number: 15792065 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Campylobacter jejuni # 25 453 7 439 446 462 51.0 1e-130 MNDNMFTAAGTAQATQQTIDGLERWRELNPLQQPTYLHADELETALTELRQQPPLIFAGE ADVLTEHIAKASRGEAFILAGGDCAETFADATADQISRRVQTILQMAAILTYGGSVPVVK IGRMAGQFAKPRSADTETRDGVTLPSYRGDIVNSHEFTEEARRHDPRRLLEAYNTSASTL NLIRAFTTGGFADLRFVHQWNRGFLSANKNYKRYERTAAEIDRALKFMEACGADFHNLRS VEFFAAHEALLLEYERALTRIDSRTGEPYGTSGHFLWIGERTRDIDGAHVDFLSRVKNPI GVKLGPKATADDALRLAEKLDPNGTPGRLTFITRMGAETIRERLPKLLASVNLPHVTWVC DPMHGNTITSSNGYKTRRFEDVMSEVSGFFDAHAEAGTIPGGLHMELTGDDVTEVMGGGA EIDEEGLRRRYETRVDPRLNHDQSLEMAFQVAEYLTSH >gi|294972313|gb|ADNU01000016.1| GENE 4 3136 - 5028 1659 630 aa, chain - ## HITS:1 COG:MT2232 KEGG:ns NR:ns ## COG: MT2232 COG0515 # Protein_GI_number: 15841666 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 2 257 7 264 399 214 43.0 3e-55 MKDPLVGTVLNGRYRVDDKIARGGMAMVYLGTDLTTDRQIAIKVMHAHLATDSSFVERFE REAMNAARLEHPNLISVTDQGRDGDVVYLVMEYLESVTLRKELRHRGKLTPRQAIVVSNA ILAALEAVHDAGMIHRDLKPDNVLLGTEGTIKLTDFGLARAVTTATTTKTLIGTVGYVAP ELVTRAGADARTDLYTLGIMLYEMLTGSQPYTDEVPIQVAYRHVHDRVPAPSEALPGLPP AIDALVLWATSPEPEDRPESARDFRQALTEARAELSDDELDFGATDPVDDSGPVITATAD VESSDPIELPNEKPLVSEDVEEEREELEHGAQNDAVEALSPTTVVHTAEVEERKADDEHA KVAATSAPDPRVARRRRTIFALIAVAAIVALVASGIVWNRQASNAPKEVPAIATGVEQSD AKNMVESAGLTVAITQKFSSDVPAGRILETHPAPGTQVEPGGTVTLVVSKGKDLVAVPKL TGLKRGDADKEAEKAGVTLGNVEDKYSDAPKGEVIHQSHKPGDKVERSQPVNITVSKGEE PISVPNVKGLEFKSAYHKMLRLGFRVGTDERYHDTVPKGRVISQHPAPGTPKHPGDFILL RISKGKKPAEDKKPQDDKKDEAKKGEKKDK >gi|294972313|gb|ADNU01000016.1| GENE 5 5025 - 6125 537 366 aa, chain - ## HITS:1 COG:DR0910 KEGG:ns NR:ns ## COG: DR0910 COG1388 # Protein_GI_number: 15805935 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: FOG: LysM repeat # Organism: Deinococcus radiodurans # 70 189 116 224 665 61 34.0 2e-09 MTNFRSSRQRPPRTHPGADALEVEALLQREQEQPRKLPERFEERPLIDDAPGFTSGTLTE AVPVTHGGRTYRVKSSDTILSIAKKHGVSIPALVELNNLTGGAVRPGQILSLPEKNVAPP PASHRVRPGDSLESIALKYSTSVGALMRANAMTSQHIVVGELLMLQGSGATSGRTRPTFD HRLPKLPTHHGDEPYPESVLAAARFNKWALSTKPAPRHDWVYATLTRLASEIGVSPHLGL AIATQESGLNHRTVSPVNAIGIMQVTPRAGMWASSLAERQLNITDPADNIVAGLVILRSL IGSTESVPAAIAAYYQGAASIETHGLAADTRAYVRAVQVLANRYATTGSTQSADSHLGGP SADGEQ >gi|294972313|gb|ADNU01000016.1| GENE 6 6230 - 6562 348 110 aa, chain + ## HITS:1 COG:no KEGG:AAur_1696 NR:ns ## KEGG: AAur_1696 # Name: not_defined # Def: hypothetical protein # Organism: A.aurescens # Pathway: not_defined # 3 109 8 116 117 102 48.0 7e-21 MTVDTWLTREEVAQLLGVTPSKVRRLLEDRYVCGVKDGHVVKIPELFFKDNEPVPALRGT ITLLDDAGMNDQEIINWLFAQDQTLPGRPIDHLRKGAKAEVRRRAQALAL >gi|294972313|gb|ADNU01000016.1| GENE 7 6591 - 7655 843 354 aa, chain - ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 26 352 28 364 366 179 37.0 6e-45 MDRLHQPADIIAHVDAVLEQELGTFAHELAGLSPVASELTDPIRAFCVGGKRIRALATWW GYQLAGGTHPGIAHMAASVELLHAAALIHDDIIDNSDMRRGNPSTHAFFSQMHGSAGFEG DARSFGINAAIIAGDVCLGLSEQLFNASGLNVTDPNVRATHDAFRRDVMMGQYLDIRIQA APVPDSQIVDRAMEVLTYKSAKYSVEQPFELGARLAGAKPQFVHDLSAFTLPLGQAFQLR DDELGVFGDPQATGKPAGDDLVEGKKTVLVGLALARMNDEDARWFRERLGTDTDTDRMIA LLDECGAKREHEELIETKLQDAFVALDTLGQHGVSSNDLELLRAYANRLTRRDT >gi|294972313|gb|ADNU01000016.1| GENE 8 7680 - 8960 797 426 aa, chain + ## HITS:1 COG:CC2466 KEGG:ns NR:ns ## COG: CC2466 COG0389 # Protein_GI_number: 16126705 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Caulobacter vibrioides # 27 397 40 409 418 209 37.0 8e-54 MSRKQLARSGGDLSALSGDDTGCTTLHVDMDSFFVSVELLDRPDLKGAEVIVGGRAGRGV VVSASYEARAYGVYAGMPMSRALAQCPSAVVIPPSRGLYSQYSARVFDILKTFTDEVHQV SVDEAYIDVASAVRRLGRPGVIAQDMRAQVREATGLAASIGVAHSRVVAKMASARAKPDG MLIVPRAQVAQFLHDMPVEAIPGVGGKTQDKLARYGITTIGQLAACSPDWLNARFGAHGK GLYASAHGEDSRDPNRVRDHSISAEHTFPADIFSLHELELELIRLADTVASRVRKEGKAA RTVGLKYRTSDFSTFTRSATLEAPSDVASEFRDALLPALANLHKRGTGVRLLGVRAADLN DLGEVGRQATLEDHGTGKRDSEIALDAVRNRFGKGAISRASLIRTNPDKTHDAPTRKTDY DRDTEL >gi|294972313|gb|ADNU01000016.1| GENE 9 8976 - 9374 301 132 aa, chain + ## HITS:1 COG:no KEGG:Achl_1561 NR:ns ## KEGG: Achl_1561 # Name: not_defined # Def: membrane protein # Organism: A.chlorophenolicus # Pathway: not_defined # 1 129 1 120 124 87 44.0 2e-16 MALSEHEQQLLDQLEKQLRNEDPRFAQSISQSHSPAGIALSPKHLVTGTLVMVVGLAVAL GAVFFLTSPLSTVGGVLGFFLMVGGAYYAFAVAPAGKSKGSAPKVQGKANKPNKGGFMNR VEERWDKRRGSF >gi|294972313|gb|ADNU01000016.1| GENE 10 9377 - 11506 1993 709 aa, chain - ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 358 573 363 593 721 118 32.0 3e-26 MRIVSALTVFVAMVLSVVATSAVFSDWNWFVPTVAVIFLTVATGWLARLSEVARSTGLTV LVQFVVGFFAVIAVTLPETTLLGIIPTGSSFTELAGSIAQGFRDVYAAPAPAPSTAGLTV LAAVSFALLTMLVDCLVHDLHLTHLAGALVLATWLIPVFIAASSIQWWHTCAVAVAFILL LLTSHAGTSRGFLWAVTAGALALFLGIGLPLLMPPIVPQANKPAGDDQNVKVINPFLDLR ANLTNKSDDVVFSYESTDPLEPPVRLTSVTEFDGKKWAPAAFSFKRGASPDAGLPAGDLG PDIEANTYTSTFAITGLGGNHLPAQYAPLETSGLGDRWIYDRDTLTIVGNNVGVDGLNYS VKYRSVEPTAEQLKKAPSANKDAFEQYLKLPNDLPSDIREEATKITKDAETDWDKAAKMQ AYFRDFEYSLDAPNEASGSVLSQFIKDRRGYCVQFSAAMATMARMEGIPARIGVGFTAGE PNDAGGYDVTMQRSHAWPELYFEGAGWVRFEPTPGGPAGPPPPWSIEGGQAPEPEEPTQE PSEEPAPEEEEAAEPTPTPSEEPALEEEPETTSAVPLLVGAGVLALILLALVPCVLRTRA RSRRLRTPLDANLVWEEIRATEVDCGYSAPASDTLAKRGRDLAEQYPDHAQDIEALIGAL ERERYAGTAREALDIDARGLVADVKKDRTGSVIARVRATLWPRSLWKKK >gi|294972313|gb|ADNU01000016.1| GENE 11 11503 - 12639 503 378 aa, chain - ## HITS:1 COG:no KEGG:Arth_1209 NR:ns ## KEGG: Arth_1209 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 4 315 13 320 463 89 30.0 3e-16 MRVTTSGIVFLIAGVSLCIAAYRFQLPALLPVGILLVFLTVFSLLFALVTSTRMKVKLRA FAPHVSGYPLTYVGADTDVRVSVTNALPFRSGAFYLEIEPENGFGFPQGVNVPSVAGGGT VEVDATFTPSARGLRGLSAVTVAINGPFRLTMFKKKVSQGLKVAVAPPRVQLAGPGMSGR PNPLAETDRLSRGTSTRDSYTREYAPGDDLRHVHWKTVARTGQLMVRQEADEDNPAAAVI VHGEGISHPVKFDLLVSAAVSATHALTRSGFTVHVVMGEQSVRAEAGERNLPVDVLAARA SATPARMPSAREVRALSELVVCAPDPDHVPRITGGQRVRTHRWYASDIDSETIEDMNFTG MFGGDVDLPAQWSLRGVA >gi|294972313|gb|ADNU01000016.1| GENE 12 12639 - 13589 814 316 aa, chain - ## HITS:1 COG:BH0604 KEGG:ns NR:ns ## COG: BH0604 COG0714 # Protein_GI_number: 15613167 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Bacillus halodurans # 17 315 9 311 318 288 47.0 1e-77 MSTPTEAEIASIADLAARARNSINTVLDGKDRVVELSLITLLAGGHLLLEDVPGVGKTLL AKALGRVVDGSVRRIQFTPDLLPSDVVGVNLFNQETRHFEFRAGPVFSNVVIADEINRAS PKTQSAMLECMAEGQASVDGTTYLMPQPFIVVATQNPIDMEGTYSLPEAQRDRFMIRTSV GYPSVESEAQMLAHNTGRDPLDELSPVTTLDEIERARTVVTNVTATDELRAYMVRLLTAT RSHDAISVGVSPRGGVLLLRAAQAHAVLNGRNYVTPDDVQNLAEEVLAHRIIAVESDHPE HTSQLIRDVVAATPVS >gi|294972313|gb|ADNU01000016.1| GENE 13 13522 - 13692 58 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELRARAARSAMDAISASVGVLISLFWLIAPGISTLPHLAPPLSSPWRFHFPPHGA >gi|294972313|gb|ADNU01000016.1| GENE 14 13899 - 14330 369 143 aa, chain + ## HITS:1 COG:lin2148 KEGG:ns NR:ns ## COG: lin2148 COG2001 # Protein_GI_number: 16801214 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 139 1 139 143 142 47.0 2e-34 MFLGTHMQRLDDKGRLILPARFREELAGGLVVTRGQEHCLTLFSAREFEAVHEKLRTAPM TSKDARDYLRVFLSGASAEQPDKQGRITIPQILRKYAGLERELAVIGLGNRVEIWDAHTW ESYLNETEQGFADRTDEVIQGVF >gi|294972313|gb|ADNU01000016.1| GENE 15 14485 - 15456 684 323 aa, chain + ## HITS:1 COG:Cgl2116 KEGG:ns NR:ns ## COG: Cgl2116 COG0275 # Protein_GI_number: 19553366 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Corynebacterium glutamicum # 5 319 12 330 337 271 47.0 1e-72 MTYPHVPVLLDMCVELLGHGIEEARARGIAPVVIDFTLGMGGHSEGILRVFDDVHVIGID RDPAAIEIATSRLAPFGSRFEAVCTSDDNISEVLEQRGNPPISGVLFDLGVSSLQLDDDA RGFSYSRDTPLDMRMNPTEGISAADVLATYSENDLTRIISTYGEERYARRIARAIVADRE HTPWTSTQQLADLIGRIVPDPKNQRKRSHPAKRTFQALRIEVNDELGNITRSLPAALSAL HLGGVAVVESYQSGEDIIVKRIFRQGTTVQAPPDLPVVPDHLKPWLEEIVRGAYKAPQEE IDHNPRAASVRLRAVRKTGVDPA >gi|294972313|gb|ADNU01000016.1| GENE 16 15564 - 15962 252 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394732|ref|ZP_06804947.1| ## NR: gi|295394732|ref|ZP_06804947.1| membrane-fusion protein [Brevibacterium mcbrellneri ATCC 49030] membrane-fusion protein [Brevibacterium mcbrellneri ATCC 49030] # 1 132 1 132 132 240 100.0 3e-62 MGILFVGVVAVLLANIFVSNTTYKINDLSQKNEDLQSERDRLSEDIAYRQSPQNVHKAAR QMGLVPADKVFFVTADGKIVAAREDPGKKVGTVPGPRADTRDDVRPNLRSDEKLPAVGES GKDLEAPTVKTP >gi|294972313|gb|ADNU01000016.1| GENE 17 15976 - 17760 1417 594 aa, chain + ## HITS:1 COG:Cgl2114 KEGG:ns NR:ns ## COG: Cgl2114 COG0768 # Protein_GI_number: 19553364 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Corynebacterium glutamicum # 14 579 15 641 651 241 29.0 3e-63 MPATTASRKVANPKRRMAFVVLAIVVALVLIVAKLVTIQGMDTAKLAEKALDSRLVDKTL PAKRGAILAADGTVLADNAKRFQLIADPVNVAAYKDEQGKVVGAWGAANKIAPILNTDPG LIYPKLKPQGETRWSPIADGLTNEVWVKIRDLKIPGITVDESSVRTYPAGEIAGNVVGFV GRDGEALTGLERQYRHLLTGKDGKQQYERGLSGDPIPLGNNSQVPPVDGTGLQLTIDTNI QMKAQNAIGEAVKKHKAEWGTVVIQEAGTGRILAAAESPTVDPNNPGKSKAEDRGSRAFT ATFEPGSTAKLITTSALIDSGKATADSQYVVPDKWKAPNGEVFRDSHNHEDQNLTLAGIL MDSSNTGTLIAAEGMNDQERYEWLKKFGFGTPPDLEFPGTSRGILRSPDAWDARTRNAVL FGQGVAATSLQTTQAFAIIANDGKAIPQRIVNGTVDPTGKIAEIPLKDGTQVVKPQTART MREILEATVVDGTGGNAKVPGYRVGGKTGTAQAPADKGGGFDGYTASFIGIAPIDDPKIT VSVTLQRPRTGHYGGSVAAPVFSDVTGYALKQMRVPPSGPVPELPAREWKNEDR >gi|294972313|gb|ADNU01000016.1| GENE 18 17747 - 19222 1201 491 aa, chain + ## HITS:1 COG:Cgl2113 KEGG:ns NR:ns ## COG: Cgl2113 COG0769 # Protein_GI_number: 19553363 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 35 482 48 506 521 275 44.0 1e-73 MKIADLTLEHTTVMGDPDRDITSVDNDSRTTKPGGLYAAFPGANVHGASFVTQLVDKGVR AFLTDPAGVEIMREAQVDLTDLTILVHEFPRAIAGHIAAQVYGTGESPAMFGVTGTNGKT TTTFILDAFLQALGHTTGLIGTVATVIAGDRVDSVRTTPEASALHQLLARMRDAGVDTCS MEVSSHALSQHRVDGVHFDVVSFTNLSQDHLDYHGTMDEYFSAKAALFTPEFASRGVVVL ADDWARKLVSVSQIPVVTVSMNSEDKPDYLVVQGDSWELHTPQGRIPFTPVLPGLFNVTN TALALAMLLEFGVQFDAVASIANGTEVVVPGRMEVVNAEHPRAIIDYSHTPDAIEKVLDR LSGDPVVVVVGAGGDRDSTKRAAMGVAAARGADVVIVTDDNPRSEDPAAIRAQVLAGARE AAGARAHTVEECENRGTAIRRAVELAGANGTIVVAGKGHETGQEIAGEVLPFSDRDKTRE AIEAHVRHENR >gi|294972313|gb|ADNU01000016.1| GENE 19 19237 - 20682 1158 481 aa, chain + ## HITS:1 COG:ML0910 KEGG:ns NR:ns ## COG: ML0910 COG0770 # Protein_GI_number: 15827430 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Mycobacterium leprae # 1 476 1 511 517 285 40.0 9e-77 MKEFTAQQIADIVGGELYGIDPQTTLSAGVETDSREVSPGDIFVARRGETTNGIEFAPSA IAAGAAIVIAEAVPTVGDDTLPSCVVTDATVALGKLASASVEALRETMTVIAITGSSGKT SVKDLVSVLLAGEGETVYPPNSYNNEVGVPLTALRAGEETRFLVLEMGARSIGNLAYLTS LIRPDIAVELNVGAAHSGVFGSIDNTARAKAELVESLQEPGWAVLNADDPRVRDMQNVLA QGVNTMWFSEGEPTRPDTTVWASDVTTGATGRSSFVLHLPGEEPAQVELSLLGRHHVSNA LAAATVAHLCGVTARSIVTTLATAGAASRWRMELVDSPNGVTVINDAYNANPDSMRAALI TLAEMGRGDDENPPRRTVAVLGEMLELGDTSIEEHDKIGSLVVRLNISRTIAVGEGARPI YQAANLEGSWGNEAAWVENISEARDLLQSELQPGDIVLFKSSRDAGLRFLGDEIAGVSGA Q >gi|294972313|gb|ADNU01000016.1| GENE 20 20832 - 21770 841 312 aa, chain + ## HITS:1 COG:Cgl2111 KEGG:ns NR:ns ## COG: Cgl2111 COG0472 # Protein_GI_number: 19553361 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Corynebacterium glutamicum # 1 308 52 361 366 275 50.0 1e-73 MGGVVILLSAVIAYFLGHLFTRSSPTSSGLLVLWLAVGLGIVGFLDDYIKVSKQRSLGLR PAGKLIGQGFVGVSFAVLALLFPNEHGRTPASTKISVLRDIDALDLAFWGTVLGMVLFVV WANLIITAASNAVNLTDGLDGLASGAAAVVFAGYVIITSWQSIQNCDLMTTARAGCYIVR DPRDLAIVAAAMGAACIGFLWWNASPAKIFMGDTGSLGIGGAIGGLAMMSRTELLLVVLG GLFVIITLSVIIQVTSFKLTGKRVFRMAPLQHHFELKGWGEVTIVIRFWIVALIGVVIAV ALFYAEWVSYLA >gi|294972313|gb|ADNU01000016.1| GENE 21 21763 - 23268 1219 501 aa, chain + ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 36 498 15 460 472 234 39.0 3e-61 MPDVLVPGATPVDYPLADKIPEQIIGPDSSLDGLTIVVTGLGVSGYPMAVHLAERGAHVI CVDGDTQIDRSEHETILRVFDVDIRRGPEHVTELPTASDGSLPDLVCTSQGWRPDQPLLV DAQAKGVPVIGEVELAWRVRGTNAAPWLVITGTNGKTTATSMLASMFRAAGVNAVACGNI GSPLLEAVLDPAAEVLAIELASFQLHWQFSMCAHSAAVLNLAPDHVDWHGSYENYVADKA RVYSNVMKACVYNREDLATRKLVEDAEVVAGARAVGFGLGVPGPGEFGLVEDILVDRAFA PNRYSSALELASLDDVAKAAGTTSAPDHYVMNALAAAALARSIDLPPVAVRDGLRSFAPG DHRMRVVRTLDDITWVNDSKATNPHAASAALGSFDPIVWIAGGLPKGADYHDIVEGFKDR LRSVVVIGEDDSALSSALEASHVDTIRIEPGPRVMERAVNAARELAQPGDTVLLSPAAAS MDQFTNYIERGDAFEQAVSEL >gi|294972313|gb|ADNU01000016.1| GENE 22 23271 - 24527 900 418 aa, chain + ## HITS:1 COG:MT2213 KEGG:ns NR:ns ## COG: MT2213 COG0772 # Protein_GI_number: 15841646 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 23 396 50 419 524 218 40.0 1e-56 MASQAVENTSRVRRWAQQWKELLDAPVATYHIVLWSVVILTSFGLIMVLSASSITSYAGG EGSPFTVFMRQALFAVVGLIVMFIVARFKVETWKKLAPVLLIGGLALQVLPLTPLGVEVN GNRSWFSVGGGFRVQPAEFVKIALSLYIGRFMAAKNKALSSFSVVIPVLAATSLSIGLVI AGHDLGTGIVLIAVALGSLFVGGLPWKWLLTLAAAAVAGVAVLVLTNANRLARIQALFTG HSSDVSDPLGQHWQSNHGLYALASGGWLGVGLGGSREKWAWLPEAHNDFIFAIIGEELGL VGTLAVVVLFGLLSYGIVRIIMRSQDRFVQTVSAGLLAWLAGQAFINIAVVTGLLPVIGV PLPFVSYGGSSLVATLLGAGVLLSFARSEPGASEALASRGFHVRSALLGRMSRKSKNG >gi|294972313|gb|ADNU01000016.1| GENE 23 24520 - 25674 1057 384 aa, chain + ## HITS:1 COG:Cgl2108 KEGG:ns NR:ns ## COG: Cgl2108 COG0707 # Protein_GI_number: 19553358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Corynebacterium glutamicum # 2 341 8 339 363 230 40.0 4e-60 MVNVLFAGGGTTGHVAPMLAIVRDFKFQDPDGHVTILGTEEGLESRLVPQAGYELNTIEK VPFPRSINASTVKFPGRLLRTVSRTKDLIKKNNVEVVVGVGGYVSTPAYLAAKSLRVPIV IHEGNAVPGLANKLGARYTKHVGYTFASTPLKGKHVGMPMRREIAQINRKDPLTRYQAMQ KLGLDASLATVIVTGGSSGAQAINDAFCDAVDEIQRTGVQVLHITGAGKADKIRGSTADL RNYHVTEYVDGMETVYSAADLLICRAGAGTVAEVTVAQVPALYVPLAIGNGEQVKNAHDP VTAGGALMVDNAAFSATTIRNTVIPLAKDPHRLRNMTKRLKELKFPATADRDMTRMIFEA ANVPYPDRPYPYELMTRDEREDLT >gi|294972313|gb|ADNU01000016.1| GENE 24 25671 - 27029 1064 452 aa, chain + ## HITS:1 COG:Cgl2107 KEGG:ns NR:ns ## COG: Cgl2107 COG0773 # Protein_GI_number: 19553357 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Corynebacterium glutamicum # 1 450 14 483 486 402 50.0 1e-111 MSTYHFIGIGGAGMSGIARIMLSRGYTVTGSDAKESSVVEALRAHGAHVFIGHDGSHVEG ADTVVVSSAIRHTNPEIVRAEELGIPVIHRSDALATLMEGKRTIAIAGTHGKTTTTSMTT VALQAAGKDPSFAIGGQLSKTGTNAHAGSGDVFIAEADESDGSFLKYRPEVGVITNAEAD HLDHYGSWERVREAFVEFGSHVGNMGGTLIVCADDKGAASIGREAREQGTNVILYGESDI ADARVNASTHGQGVSVSIAFEGQEYAFDIALPGTYNALNATAAFLSARAVGGDPQGIIQG LESFTGTRRRFELRGIEKGVRVYDDYAHHPTEVTALLTAAKKVVDPSNKVHVIFQPHLFT RTKNFYREFARALSLADDVIVLDVFPAREDPIPGVTGELIAREVTSDVTYVPAFSDAVPT VVERVKPGDIVLTVGAGDVTILGPELLGALAQ >gi|294972313|gb|ADNU01000016.1| GENE 25 27026 - 27715 415 229 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394741|ref|ZP_06804956.1| ## NR: gi|295394741|ref|ZP_06804956.1| cell division septal protein [Brevibacterium mcbrellneri ATCC 49030] cell division septal protein [Brevibacterium mcbrellneri ATCC 49030] # 1 229 1 229 229 435 100.0 1e-120 MTTIPVIGKKRGIHTAVKVGFGIVAGLVLIVCLMFFTPIMGLKDVSVETGDLTPGDEVRA FVLEQETGRPLPRISMTGLSRDIREKFTKSEYVSVRWSGINTLHVTVTDKEPVAAFKTSN GWVRYSSHGEEIDVVQNDPDLVNIRGGSPGGIEQALIVVQHVPDLSRVESVEAQKENDIT VVVTHEESTRQIRVGDSSNIEKKFDVAFKLLEHSKEYVDVSTPDTPVAR >gi|294972313|gb|ADNU01000016.1| GENE 26 27837 - 28988 1246 383 aa, chain + ## HITS:1 COG:MT2209 KEGG:ns NR:ns ## COG: MT2209 COG0206 # Protein_GI_number: 15841642 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 22 314 44 336 401 379 76.0 1e-105 MAEYPQSGADIKVAGTGGGGVNAVQRMIDVGLRGVEFIAINTDAQALVLSEADTKLEIGR ELTRGLGAGADPEIGRKAAEDSEEAIQEALEGADMVFVTAGEGGGTGTGAAPVVARIARS LGALTIGVVTRPFTFEGRRRSAQAEAGIEALRKEVDTLIVIPNDRLLTISDRNVSVVEAF KSADEVLRSGVQGITDLISTPGMINLDFADVKSVMQDAGTALMGIGSAVGEDRAVKAAEA AIASPLLEASIEGAHGVLLSIQGGTDLGLFEVNEAARLVQEAAHPEANIIFGTVIDSNLG DECRITVIAAGFDVPVSETQAAAPAVASQEATPTSDVPSEEAEERPAPAQPEAPAEAPPV PESLPEERTKNFDNNIEIPDFLK >gi|294972313|gb|ADNU01000016.1| GENE 27 29108 - 29776 342 222 aa, chain + ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 215 36 246 246 140 39.0 1e-33 MGDDETVVAANRGIVANTLGLNPEALRFVDQVHGSRVIAWDENGAYDPLTGDRTDSVTAD AHVTKTPGLGLVVMVADCVPVMFADPEAGVVGTAHAGRAGMVDGVVSATVAAMRELGASQ IQVAIGPSICPRCYEVPADMRDQVGSVEPVTASVSREGTPAIDVAAGVAEQAAREGCEIV DFSSTCTRESSDLFSYRKDAVTGRFGALVWLEEMATHPLKDA >gi|294972313|gb|ADNU01000016.1| GENE 28 29835 - 30323 495 162 aa, chain + ## HITS:1 COG:MT2206 KEGG:ns NR:ns ## COG: MT2206 COG1799 # Protein_GI_number: 15841639 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 17 154 87 235 241 94 37.0 1e-19 MSTLKKIGNYFGFGEEEAYNTEPRHERNSQYEASEYEAPVYEEEEQEEPADVTPIRSSVR PVETASPANMSNIHVIHPRSYNDAKAIGTAFRDGIPVVMNLTAMDEANAKRLVDFSAGLI FGLHGSISKVTNNVFLLTPANVEVGEETDSVAKTQASFFNQS >gi|294972313|gb|ADNU01000016.1| GENE 29 30392 - 30691 333 99 aa, chain + ## HITS:1 COG:MT2205 KEGG:ns NR:ns ## COG: MT2205 COG0762 # Protein_GI_number: 15841638 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 86 33 122 128 67 43.0 8e-12 MAIVLQILAWLLSLYVYVLIGRVIIDLIQIFARDWRPTGVVLVLCETIYTLTDPPVQAIR KVIPPLRLGNVAIDLGFILLFIGVQMLSRFLFVLSTQVG >gi|294972313|gb|ADNU01000016.1| GENE 30 30793 - 31548 929 251 aa, chain + ## HITS:1 COG:MT2204 KEGG:ns NR:ns ## COG: MT2204 COG3599 # Protein_GI_number: 15841637 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 240 1 242 260 82 33.0 6e-16 MALTPEDVVNKQFQHVKFREGYDVDQVDDFLDEVVVELRRLNEENDSLRRKLSVAEQRVA ELEAKGSQGEDVNATQAMPAAMGAPKKDEAKPVVPPQQPAAKAGEETQVAPAVATPVAKP AAAPAAPAASATAPAAAPVSSDKDAHGLIALAQRVHDEYVAEGEKTRDRLIGEAKKRAAD IVSEAQNKRDETLQQLELQKVNLEKDIDGLQNFERQYRTRLKSYLSDQLRALESSGSLAP ETLSQNTNQSL >gi|294972313|gb|ADNU01000016.1| GENE 31 31667 - 32161 492 164 aa, chain + ## HITS:1 COG:MT1591 KEGG:ns NR:ns ## COG: MT1591 COG0597 # Protein_GI_number: 15841006 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Mycobacterium tuberculosis CDC1551 # 4 160 32 183 202 116 41.0 2e-26 MSTRAVTLYALALGVIAIDQLTKVLAVKFLQGEPRIAIVGDFVGLTFLRNPGAAFGLGSG ATWVFSVIAIAVFAVIVFISRKLASTWWAIGLGLLLGGLTGNLIDRFFRMPANGEVPQFM HGAVVDFIDLYFFVCNIADIAITGAAVLIALLTLKGTSIDGREE >gi|294972313|gb|ADNU01000016.1| GENE 32 32161 - 33087 235 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 4 253 6 247 285 95 28 2e-18 MERSILVPEGLEGERVDTALSRLLGLSRSVAAGMAESGDVEVDGVKVPKSMRVTTGARID VTMPKPKEPLSIVAEPVPGMNVIYDDDAFVVVDKPVGVAAHAAAGWSGPTVIGGLAAAGY QIATSGAAERQGIVHRLDVGTSGVMVVAKGEHAYSVLKRAFKNRTVDKTYHALVQGLPDP VVGTIEAPIGRHPRKDGLYAVRTDGKHAVTHYEVLEAYRSASLVEVKLETGRTHQIRVHM SATKRPCCGDLPYGADPVLAQKLGLNRQWLHAVKLGFEHPETGEYVEFESDYPEDLATAL ERLRAAQW >gi|294972313|gb|ADNU01000016.1| GENE 33 33138 - 36629 3132 1163 aa, chain + ## HITS:1 COG:MT1598 KEGG:ns NR:ns ## COG: MT1598 COG0587 # Protein_GI_number: 15841014 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 1163 21 1183 1184 1270 55.0 0 MLDGAARLGDLMAATNELGMRALATTDHGYLFGAFDFWNQATKAGIKPIIGVEAYVTPGT ARNDKTVVKWRTDESQRSDDVSGGGRYTHMTLLSRNNRGMQNLFKASSLASLDSALGNRP RLDRELLQNYSNGLIATTGCPSGEVQTRLRLGQYEEARKAAGEYREIFGADYYFCELMDH GLEIERRVTKDLLRLAKELNLPLVATNDLHYTHESDATAHEALLALQSGSKLLEPTYEQG GSRFAFSGTGYYLKSPAEMRHLFKELPEACDNTLKIADMCEVSFDTSANYMPKFPTPEGE DETSWLIKEVDKGLHYRYPQGIPDEVRKQADYELDIIIKMGFPGYFLVVADFINWSKDNG IRVGPGRGSGAGSMVAYAMRITDLDPLQHGLIFERFLNPERVSMPDFDVDFDDRRRSEVI DYVTQKYGSEYVAMIVTYGTIKTKQALKDAARVLGHPFSMGEELTKALPPAAMAKDIPLT DIENPEAPRYNEAGDFRNLLATNEQAREVFETARGLEGLKRQWGVHAAGVIMSSEPIIDV IPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDALENIQRNRDVEIDLERL ELDDEDTYKLLARGDTLGVFQLDGGGLQGLLRLMQPDNFEDISATLALYRPGPMGADSHT NYAKRKNGLQEITPIHPELAEPLKEILDTTYGLIIYQEQVMAIAQKVAGYSLGQADILRR AMGKKKKAELDKQQVGFFGGMKERGYSEEAAQALWDILLPFSDYAFNKAHSAAYGVVSYW TAYLKAHYPAEYMAALLTSVGDNKDKLAVYLGECRKMHITVLPPDVNESELNFTPVGNDI RFGMGAVRNVGHNVVDGIVESRTEKGAFTSFSDFLDKVPSHVCNKRTVESLIKSGAFDSL GHTRRALVEIHEEAVDSVVGVKRQEAAGQFDLFAGLGGDDAASFSVPIPDRVEWDKKEKL AFEREMIGLYVSDHPLNGLEGVIASESDLPLVDLISQGRSEGSTITVCGMITSLVRRVSK NSGRPYAIVTIEDLEASIEVLFFGDVYEPVADILTSDLVVTIRGRVKQSEDRPISLMAQS VTLPDISNASGTPLQLTIPLDRATEGTIEELDEILRANPGPTEVRVNVLEPGKRTLIRLN RRVETGPSLFGDLKALLGPRCLG >gi|294972313|gb|ADNU01000016.1| GENE 34 36692 - 37999 749 435 aa, chain + ## HITS:1 COG:ML1257 KEGG:ns NR:ns ## COG: ML1257 COG0141 # Protein_GI_number: 15827643 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Mycobacterium leprae # 12 432 17 446 449 366 51.0 1e-101 MTELLRIINVPAEVSTRELRSLVPRAHDSLDRARSSVAPVVEDVRARGRAAVLEATSRFD GVTVEQIRVPHEELARACDELDSRVRAALEESIARLRQVSARDVPQGSTTEFDGSFVSTR WTPVDRVGLYVPGGRAVYPSTVVMNAVPAQVAGVESLALASPPGPSGLPHPVVMATAELL GVEEVWAMGGAQAIAAFAYGFDDGEVCEPVDVITGPGNAYVAGAKSLVRSFVGVDSIAGP TEIIVCADAQAKPELVATDLISQAEHDPLAASVLVTASADLVTRVQDELARQLETAKHRE RIREAFAGPQSGILLVDSRSDMVRVANVYAGEHVEVMVEDPHEFARELRHGGTIFIGDYS PVALGDYCSGSNHVLPTSGTATHASPLGVHSFMKSSQIVSYTRDGLLDVADHIETLANAE NLPAHGYAVHLRRES >gi|294972313|gb|ADNU01000016.1| GENE 35 37999 - 38466 293 155 aa, chain + ## HITS:1 COG:MT2791 KEGG:ns NR:ns ## COG: MT2791 COG1327 # Protein_GI_number: 15842256 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 148 1 148 154 175 63.0 3e-44 MHCPFCRHSDSRVVDSRTAEDGASIRRRRQCPNCSRRFTTIEATSLSVIKRSGVSEEFSR QKVVAGVRKACQGRPVSEDDLAKLAQRVEENIRSQGIAEIDADEVGLAILDPLRELDQVA YLRFASVYQGFDSLEDFEAAISSLRAERETARSEE >gi|294972313|gb|ADNU01000016.1| GENE 36 38630 - 39295 360 221 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394752|ref|ZP_06804967.1| ## NR: gi|295394752|ref|ZP_06804967.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 47 221 1 175 175 345 100.0 2e-93 MYTQLIQTFSPHIPHVPSLSAPVRRAHWDKYWTGNRPPILDGASEVMSRWTLFNLGAHID GPQSALNFYAGVSMWAAGNAPRSVYRACKPPTTEDFAERLFEAITHTRECEPEDAYWAWS TDMRIPFVGPSHFTKLMYFSRRNPLYESENMPLILDGRIARALKMKQRSAWTASTYGTYL RTLAEIAHEWGPGATAEDVECQLTAQGIRAITRKTQLAQAA >gi|294972313|gb|ADNU01000016.1| GENE 37 39358 - 41544 1443 728 aa, chain - ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 7 717 21 753 755 374 36.0 1e-103 MNNLNEISIEQQHVDAVYTRLDELRTETTQKLQNVRLTHVGNHHQNRSERDAFATVYEDQ LIRLNSAEEGLCFGRIDDRDGTTTYIGRIGISDQDRSQLLMDWRAPASEPFYRATAAQPE NLVLRRHLTTRGREVVGIEDDVMSLSDLDSDKRRHLRGEGALIASLDAHRTGRMSNIVET IQAEQDAIIRKPLSGVVVVQGGPGTGKTAVALHRAAFLLYKHRTKIAQSGVLIVGPSPVF LKYIEKVLPSLGETGAVLLTPGQLFPGIDTTLRDSFSTSAVKGDLRMVKVLSRAVRNYQR IPASDIELNVGLRRVTLTRDMVKTARDRARRSGYKHNRAREVFATTLMNALAQRIVENGE GGASEDQIAEVVDDVRRSRDARVAINTHWLPLTPLGVLDALFSKPHKLVAAADNVLSFEE MARLRRPAGSEITIEDVPLLDELAELLGTAPGQAQAPSQEVEYAERVLEMTGTGDLISAE QLAQRYADASSAQTLAERASEDREWTYGHLIVDEAQELSPMQLRLLFNRVPSKSATLVGD LAQASVVDSERTWNTMLSPHVDSFDAQELTVSYRTPGRIMSIANQLLMDHFPTLAVPTPV REGTHDPEVVRTSSVSESASRLASVLGEQDLGGTCAVITAVEHREIIEATLTDAGLDYGV GPAGIDRTVAVLTPFGAKGLEFDNVVIFEPAFVAQSQKGVGELYVALTRATSRLTVVTSN ESVLDAYL >gi|294972313|gb|ADNU01000016.1| GENE 38 41636 - 42394 371 252 aa, chain - ## HITS:1 COG:Cgl1208 KEGG:ns NR:ns ## COG: Cgl1208 COG0421 # Protein_GI_number: 19552458 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Corynebacterium glutamicum # 29 247 40 268 314 133 31.0 4e-31 MGRKRARDTSVEVEISTGTARKENIPGESNSWVLYVNSVPSSSITIGEPTRLDFPYLHWM TTTIDHVFPPGTSVRAVHIGAAGCSLARRLHATHPRSRQTAIDVDALLMEYVREWFDLPR SPALALRVGDGAREIHTFAPGSIDIVVRDAFAGDTTPQALTTNDYFAHTAAALKPEGLAL FNIAGTPGHARQEIQAISSHFAHVYIIHASGRTRGQRANVVIAATASASTLDTTRLAASL RTGPAPATITQA >gi|294972313|gb|ADNU01000016.1| GENE 39 43069 - 43644 357 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394755|ref|ZP_06804970.1| ## NR: gi|295394755|ref|ZP_06804970.1| hypothetical protein HMPREF0183_0468 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0468 [Brevibacterium mcbrellneri ATCC 49030] # 1 191 207 397 397 388 99.0 1e-106 MRRQLENCTGDKRSDLEALIRDASKLCSFALSEATPSDWDSIHVSPGAVRAIEMLSDNGV GRDALITLFSARHPSFRPDVVGHLSPEGFLETILEILEGDMERHLAGMDAIRPHMPYTYS VLMYLKLVAVHASDEYFSELLGVIAWFEWVAGHNSYAHHFARSALAVDSANSFAGTVEAF VERGITAVWTR >gi|294972313|gb|ADNU01000016.1| GENE 40 43759 - 45165 1599 468 aa, chain + ## HITS:1 COG:ML1022 KEGG:ns NR:ns ## COG: ML1022 COG0568 # Protein_GI_number: 15827492 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium leprae # 2 468 77 574 574 437 57.0 1e-122 MPAVEKEKQASTTAKKKATTSKASTTAKKATSTSKSTASKTTGAKKTASTAAKKSATTAK KSTAAPKKTTTAAKSAATAKRAAKATAAKEAAKKTATRQKAQDAEDGENDKVETDEVEEL ATTDESTETRNSQEEEKDAQIKEAGGFVVSDADDEDQPAQQVATAGATADPVKDYLKQIG KVALLNAAEEVDLAKRIEAGMYAEHLVDEGKVTDARDLRDYKWIIHDGRIAKNHLLEANL RLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMA DQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPERVVEVQKYGREP ISLHTPLGEDGDSEFGDLIEDSEAVVPADSVSFTLLQEQLHSVLDTLSEREAGVVSMRFG LNDGQPKTLDEIGKVYGVTRERIRQIESKTMAKLRHPSRSQVLRDYLD >gi|294972313|gb|ADNU01000016.1| GENE 41 45194 - 45820 547 208 aa, chain - ## HITS:1 COG:MT0934.1 KEGG:ns NR:ns ## COG: MT0934.1 COG3324 # Protein_GI_number: 15840331 # Func_class: R General function prediction only # Function: Predicted enzyme related to lactoylglutathione lyase # Organism: Mycobacterium tuberculosis CDC1551 # 7 195 50 244 257 79 31.0 4e-15 MGIGTRAVVNGASVAGISQQPAEAPQGQPGFWSLYFHVPDFEGFLQEIAENKGQALMAIP NFGDNASVALVADSAQTGFGVLAYDDDRGFSLTDAVGAPAWFELHTTDTGVADFYTTVFG WDVQSSTDEYTTFSAGDSPVAGMVDISELSIPAHWKIYVRVSDVDATLERAQEHGGAILS KPVDTHLGRVAQIIDCHNAAIAIVSTTR >gi|294972313|gb|ADNU01000016.1| GENE 42 45934 - 46782 706 282 aa, chain - ## HITS:1 COG:MT3820 KEGG:ns NR:ns ## COG: MT3820 COG0860 # Protein_GI_number: 15843338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Mycobacterium tuberculosis CDC1551 # 55 274 12 233 241 139 38.0 9e-33 MKHAIALYACAVMVLLGGCGGTQTAQPRTTVKPEPITHEQNPGDTSASETPQRKPDESDG TDKPANSLDGVTIALDPGHNGGNASHLSRINKKVPDGRGGKKACNTTGTATDGGFPEHEF NWNVGTKVRDELGKRGARVIMSRDSNDGVGPCVDERGKFADEADFLVSIHANGSTDSSIR GFGVILAPGEKVEESTKLAEAIVRGFKDHNFPIKRAGYGKDGMVERTDLAGLNHASVPAV IVECGEMRNPEEAERMQKDPDAYARALVDGIDTFASYATMGL >gi|294972313|gb|ADNU01000016.1| GENE 43 46854 - 48956 1441 700 aa, chain + ## HITS:1 COG:L0283 KEGG:ns NR:ns ## COG: L0283 COG0187 # Protein_GI_number: 15672887 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Lactococcus lactis # 1 695 10 651 651 526 45.0 1e-149 MATSDYGARQLQVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNAVDEALGGYGENIT VTLHEDGSVTVEDNGRGIPVDIEPRTGLTGVELVMTKLHAGGKFGGGSYSAVGGLHGVGA SVVNALSSRLDIEVTRSSKVYRMSFKRGAPGMFTDRNEPHPDNDFTPFKKESKLEVVGKA KRGVTGTKIRYWADPQIFIRDAKFNYDHLVDRARQTAFLVPGLKITLVDNRGVAVDETGA PIPHRVEEFQFDGGISAFVDHLAHDAALTDTWRFTTQSSFKETVPVLNSSGHMESQEVER DITVDVALRWGNGYDTMLKSFVNIIATPKGGTHVSGFEQGIVKTIRKAVESNARRLKVGK DKLEKDDILAGLTAVVTVALAEPQFEGQTKEVLGTPPVRGIVSRAVEKELTSILESSHRA TKSQVNTLLEKVVAEMKSRISARTHRENQRRKTALESSSLPAKLYDCRKSDVDETELFIV EGDSAMGTAKAARNSEMQALFPIRGKILNVQKASVADMLANAECAALTQVIGAGSGRSFD LEQARYGKVIIMTDADVDGAHIRTLLLTLFFRYMRPLVEAGRVFAAVPPLHRIEVVNRGK ANDVIYTYSEAELHKTIARLDRQKKSYKTPQRYKGLGEMDADQLAETTMDPEHRMLRRVT MDDVAKADTTFNLLMGSEVAPRKQFIVSGAASLDAQRIDA >gi|294972313|gb|ADNU01000016.1| GENE 44 49124 - 50695 1566 523 aa, chain + ## HITS:1 COG:MT1659 KEGG:ns NR:ns ## COG: MT1659 COG1271 # Protein_GI_number: 15841078 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Mycobacterium tuberculosis CDC1551 # 1 494 1 459 485 409 47.0 1e-114 MDPVLIGRWQFGITTVYHFWMVPLTLGLGLLVGIMQTLYYRTGDERWLRSTKFWGKLYLI NFIMGVATGIVQEFQFGMAWSEYSRFVGDVFGAPLAMEALIAFFLESTFLGIWIFGWKRL SKPLHLTVLWAAVIGSWLSAYFIIVANSWMQHPVGVEMIDGRPVMVDVVAVLTNNTALWA YAHTLAGAVAVGGGFLVGIAWYHLWRRRKDGIDTVDDKGNVVVGDAPEIAGRDAKDHSVW IKSLRMGAWTAIIAFVFVAITGDFQAKLMYEQQPMKMASAEAACHDGGQFSVLTVGKPDL NSCDSVKPIIEIPGLLSFLAKGDFTSDVPGVNTLIPEYEEKYGTTLPEGDMYGEYSGAPV DYQPLMIVTYWGFRMMIGFGVLSAAFAALALVLTRKGTVPQAKWLNTLAVLSIFAPFIAN TAGWVFTEMGRQPFVVAPNPDPSGVDGVFLYTAAAISPSVTAAELLFSLITLTLLYGALM VVELKLIIKYTRGGVASAMPELDIRNNKPTVDAKNDDVLAFAY >gi|294972313|gb|ADNU01000016.1| GENE 45 50705 - 51739 1089 344 aa, chain + ## HITS:1 COG:lin2865 KEGG:ns NR:ns ## COG: lin2865 COG1294 # Protein_GI_number: 16801925 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Listeria innocua # 4 325 3 329 337 236 41.0 4e-62 MEILQIIWFILIAVLWLGYLFLEGFDLGVGVLMKALAKNEKERRVLLNSIGPVWDGNEVW LLTAGGATFAAFPLWYASLFSALYLPLTLALVALILRAVSIEYRGKGHSDQWRNFWTWAM AGGSAVAAFCVGAMLALTTTGLPLNENGDNIGGPFAWVNVYAIIGGLGVLGFSILHGLLF VSLKTDGDIRHRAHALAAKWGPVFLLPIVVWVVIVQVMHGPVWGWAVIALAAVFAAISWV RLRAGSEKGGFIFQGLFLVAGVVSVFASIFPNVLPSTINPEFSLTLANASSSNYTLGVML WVTVIFVPIVLAYTVFSYTLWAKRLHVEHIPEAHQIPVAARIKA >gi|294972313|gb|ADNU01000016.1| GENE 46 51754 - 55011 183 1085 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 850 1080 103 337 398 75 26 2e-12 MIALGAPQGARALAWLGLVAVLKAVGLVLIAESCARGIVALMHGEPFEFALLLGCVGAAI RGVAVWLTKAVGARASVGFKTELRSRVLDRVTAGSGRDTGVSDGALAVSVTRTLDELDDY FVRVLPALLTTMCVPALIIVRILFADWVSAVVIVVTLPLVPLFMILIGKYTLERVSEATQ SLDQLSNNLVELARGLPVLVGLGRVYAQTAALKSMSESYRTTTLQTLRVAFLSALALELI ATLSVAVVAVFIGVRLVSGSLDLQAGLLALILAPECYLPLRQLGAAFHATEDGMAAYERV KRLISRPVNAPVECRPGSLAIAEVSVTYAGRPRPALSPVSATFSGLTVVTGGSGTGKSTL LGVLAGLVRTNDTCTVSGHVVGVPERIAYAGQAPRTCGETLEEEAQLYGAELTPYLQRVG LDLDPQTPPSALSPGELRRFAIARALMRVDAGAELLIVDEPTAHLDAQTAHTIRTELLTI SQSIPVIAATHDPELINLGTELRLDGTPNSTETTTKTTPENQPAHTPKAAPTSAPETRIS TRTALRRLVNAMNVFSAKFIGSTLFAVAAVASAAALSGVSAWLIVHASFQPPIMYLLVAI VGVRFFGLSRSVFTYVKQLLLHDAMLTSLTQLRERVWLGFARAGTANRTLLRGELALTRL VADVDDVRDGAPRVVQPPIVAAVVAVAAIVVMALIHPWAAVLTAVCALVSVVCAPAVTLV VDGQASSARLSTRTQVLSRISAFLWAREDVLVNGRAAEVVDSIRETDRQASSAELRVLWA AGIGEGIVTVATTLNAVLMLPLLASAVASGEVTPELLAVTVLLPLALIDCYIDSLTAVQN WPALKHSLARVPALDERGEIRKDTSEPVAEFDSAGLEKVAARWPGMTEDVFSDVSASITP GSWTTVTGRSGSGKTTLISLLLRFINPVSGKYTLNGGDALKLAATQLSSVFAWCPQESHV FDSTVRNNLAIARDRDNAPTDHEIRDVLVRVGLEELAEVDSRIGASGAYLSGGQRQRLAV ARTLLAGAQVIILDEPTAHLDEQLATSLMDDLREILHDKAVVVVTHDHTLIRPNDRVIAV GELRR >gi|294972313|gb|ADNU01000016.1| GENE 47 55025 - 55963 670 312 aa, chain - ## HITS:1 COG:no KEGG:Jden_1413 NR:ns ## KEGG: Jden_1413 # Name: not_defined # Def: hypothetical protein # Organism: J.denitrificans # Pathway: not_defined # 9 302 14 333 415 122 34.0 1e-26 MTRLSFQSIEDDSLKLVDGQGNEYFLPATEDVFAAIRRVRTHTVTGHSTGHVRPKVIQSM IRSGMSAEDVAHDTGAPLTQIQQYEGPILAERRHIAHTAGQCPVYSESGSRPLSEVVTER LQARDIEESDQTWDAWRTETGAWHVELRYPAGNTTSVASWEYRSGSVTALDDEARWLSDT GPTDSGPIPDYGSVFNVEADHTQRDTRDTQSETGRILESLRRRKNETQPIVRSVPDAPES QPDGAHSALSRPQDAHDDAVLAAPAHHDDDQPSLLDEPGVTDDADEQLEEQPRKKGRSSV PSWDEIMFGKKD >gi|294972313|gb|ADNU01000016.1| GENE 48 56079 - 57176 1035 365 aa, chain + ## HITS:1 COG:Cgl1500 KEGG:ns NR:ns ## COG: Cgl1500 COG0276 # Protein_GI_number: 19552750 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Corynebacterium glutamicum # 1 346 1 347 370 244 39.0 2e-64 MSESSLSPFDAVVLMSFGGPEGPDDVVPFLKNVTAGRGIPEERLKEVGEHYYMFDGVSPI NEQNIALLQQLESELERRGIATPILWGNRNWDPFLTDVIRDHRERTGATKYLAITTSAYS SYSSCRQYREDFGATVETLKGEGIDVTINKVRQYYNHPGFVNAQVQIMRHALVDFEAKVG ELDPQKHRILYVTHSIPTTMQAASEVATAGYADQHLQLMNAIDQQLDDSLPHELVFCSRS GPPQVPWLEPDVNDRMEKLASQGITGVIVAPIGFVSDHMEVKFDLDVEAAETAERVGLDY VRAATVGTNPAFVMGLVDLLEEKAAQVRGEEPEQPTLTPEGPVDGCTLAQSGQCCKGRTD KPVMP >gi|294972313|gb|ADNU01000016.1| GENE 49 57191 - 57493 373 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394765|ref|ZP_06804980.1| ## NR: gi|295394765|ref|ZP_06804980.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 9 100 1 92 92 138 100.0 1e-31 MTARVLFVMYVVYITQTQSRTDAEGKRMSEFTDEIDRKADLLREKINEARENDNEFLAEQ LIDELRNIELIAREHDLDTSEIRQVIATETGQLPVINEEP >gi|294972313|gb|ADNU01000016.1| GENE 50 57468 - 57674 133 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTNSTRAVTRCLFIAERPVIDVSSSTVYSYAVNHMHSRFWILAKSYLRMQNALDIAQTMC ASDTFTGV >gi|294972313|gb|ADNU01000016.1| GENE 51 57684 - 57986 264 100 aa, chain + ## HITS:1 COG:no KEGG:Krad_4064 NR:ns ## KEGG: Krad_4064 # Name: not_defined # Def: hypothetical protein # Organism: K.radiotolerans # Pathway: not_defined # 1 99 28 129 130 114 68.0 1e-24 MATDYDVPRKQDEDLSSDSIEELKAQRNQQQASQVDEDETAAAEGFELPGADLSNEELSV RVLPKQNDEFTCTECFLVRHRSQMSDESEEGSPVCTDCAD >gi|294972313|gb|ADNU01000016.1| GENE 52 58005 - 58454 409 149 aa, chain - ## HITS:1 COG:no KEGG:Arth_1635 NR:ns ## KEGG: Arth_1635 # Name: not_defined # Def: membrane protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 7 147 21 161 162 108 43.0 8e-23 MTAPSSLYSERVTPSIWWWVVALVLSAMTSLMVIPLSWIAGIIVPIVVFIAVALTLRSLI PRVTVTQDVLFAGPAHIERSFITEATPLKGEDAFKARGQKLDARAFLVTRPWAKDVVKVD IEDPNDPTPYWIVSTNNPDELARVLTQQG >gi|294972313|gb|ADNU01000016.1| GENE 53 58560 - 58976 356 138 aa, chain + ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 1 138 10 147 149 161 61.0 3e-40 MRVHESAQVPTYGHPGDAGADLRARIDVTVQPFERVTVPTGIALAIPMGYVGLVHPRSGL STKHGLTVVNAPGTIDAGYRGEIKVALINLDPHEPVEISAGDRIAQLLIQKVERADFEIV DSLDETRRGDAGFGSTGK >gi|294972313|gb|ADNU01000016.1| GENE 54 58982 - 59776 918 264 aa, chain + ## HITS:1 COG:no KEGG:SCAB_24011 NR:ns ## KEGG: SCAB_24011 # Name: not_defined # Def: hypothetical protein # Organism: S.scabiei # Pathway: not_defined # 42 264 23 259 259 129 35.0 2e-28 MGLFSSFFGRKDKAEDIVDDVEDVDNEPEDDDRADEELRESEVTGNSDDDDEPQKEAPRD RVKNGPWDESEDAGEANRIDLGALRIPVIDGMQVQLESQEENGSILAVSLIHKGGALRVQ AMAAPKTEGLWAQVRKQVSASVTAAGGTANEVFTDMGYGLSAVIPHKIDEDHVTVQNHEY MGVDGPRWFLMGIIAQTDGVPEEVRTELVEVFRGIIVDRGDGPMPPGQVLELTPPNLQSD ESSEDSSDDDIDPFERGPEIAEVR >gi|294972313|gb|ADNU01000016.1| GENE 55 60091 - 60744 762 217 aa, chain - ## HITS:1 COG:MT2766 KEGG:ns NR:ns ## COG: MT2766 COG0569 # Protein_GI_number: 15842230 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis CDC1551 # 1 216 1 216 220 192 51.0 3e-49 MKVVIAGAGSVGRSVARELIDKGHAIVMIDNDKQAIRRDLVPDARWVHTDACELDGLADA QLEDSDVVVAATGDDKTNLVLSLLAKTEFGVPRTVGRVNNPRNEWLFDSNWGVDVAVSTP RLMTALVEEAVEVGNLVQLLTLQQAGTTLMEMTLHEASEVLGKRVGDIELPQDTVLVAVV RSGRAFAPQQDDTLVDGDELFFLADASVKPRLRELFS >gi|294972313|gb|ADNU01000016.1| GENE 56 60741 - 61412 582 223 aa, chain - ## HITS:1 COG:MT2765 KEGG:ns NR:ns ## COG: MT2765 COG0569 # Protein_GI_number: 15842229 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis CDC1551 # 1 199 1 199 227 207 52.0 1e-53 MHFVIMGCGRVGAQLARGLDAKGHTVAVIDKNADAFVKLGKNFTGTTVTGIGFDRDTLVR ARTSDAYAFAAVSSGDNSNILAARVARETFGVKHVAARIYDPRRAQVFERLGVPTVATVR WTADQMMRRLIPSGAVNEFRDPSGRMVLSEVHVHPDWVAHSVSEIETHSKARVAYFTRMG EGIEVTPDTLLQDGDLVHVMCRAESLDDVVRSLDGPITEGDNR >gi|294972313|gb|ADNU01000016.1| GENE 57 61543 - 63462 1800 639 aa, chain + ## HITS:1 COG:MT2764 KEGG:ns NR:ns ## COG: MT2764 COG0531 # Protein_GI_number: 15842228 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mycobacterium tuberculosis CDC1551 # 1 622 33 648 657 447 42.0 1e-125 MPIFASDMLSSVAYAPDAILLALSLSGFVAMSTAPWIGIAVGVLILILVGSYRLNLKAYP GGGADYDVATRNLGNRPGRAVAAALLVDYVLTLSVSMAVLASYLASAFNVLEGYLTLITT IGIAVVTLFGLRGGRAMPLLLAIPTYLFVGAVLVTVGYGAIRIARGDEIEAATAHLSVIP LDGDMKWHGAVVTIIILRAFSSGLVAVAGIETVGTAVPKFAKPRGANAGNTLVFAGLLSA TMLIGLTWLATQVGVKYVSDPSTQLFEHSQPVGDTFHQVPVLAQCADAVFDHLPAVATAI TLITALVLLVAANTSMEGFPGLASKLARDSFLPKQLASLGDRMTFSNGVVVLSVSSIVLV VLTGANAERLIDMYLVGVFASLALGQWGMVKHWNNRIRAIVSGPVRTRMMFNRVVNTVGA VTASGILAVVLVSKFLLGAWLALALMFVAYVAMGLIHRHYTRVSRELNVNPKDGNVKALP PRTRAVVVVSEINKPTMRAVAFARATRPNFLSAVAIAVDEDQAALVQKQWDELKLPIRLT LLDSPYRELIRPVMNYIAHMHAKSPDDLITVYVPQYIVGRWWEQLLHNQALLGLRKRLLF LPNVQVVTVPWRLKSFNRNRELLMGRGGHVDERVMRMYE >gi|294972313|gb|ADNU01000016.1| GENE 58 63459 - 64712 705 417 aa, chain + ## HITS:1 COG:BS_yefA KEGG:ns NR:ns ## COG: BS_yefA COG2265 # Protein_GI_number: 16077741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus subtilis # 15 409 24 450 459 164 30.0 3e-40 MNQVELTVDAPAAGGESVARTEGGVIFVSGAIPGERVRVEITETKKSFSRGRVAEVCEPS PHRVPDRRIAWGCPDVGGVEYAHVTVDHSRELKRVAALDQFARIGKFDRELMDQLEREFR VTPPVNDGEEWRTRVQLAVAGGRVGMYRAGSHDIVPVTHVPLAVPAINDLNLHQVDLTGA ERVEIAVGEAGGAVTVVGGEEIAHRLAEVVPEGWSLMSRAAGRRNRSSAATTLLAGPGRV SHTVRGVTFDLDAEGFWQVHPDAADILSRGVVERVRGDVADLFCGAGLLAVMVARETGAR VWGVEGSALAIESARSNAKRAGVDATFDVGRVEKLDALTGADTVVVDPPRAGLDPAVIRL IASSTCGRVVYVSCDGATFSRDAQRLQNSGFQCRDIQAFDLFPLTAHVEFIGTFDRV >gi|294972313|gb|ADNU01000016.1| GENE 59 64869 - 67556 3053 895 aa, chain + ## HITS:1 COG:XF0290 KEGG:ns NR:ns ## COG: XF0290 COG1048 # Protein_GI_number: 15836895 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Xylella fastidiosa 9a5c # 5 892 3 902 908 1122 60.0 0 MSTVDSFKSKSTLDVGAQSYEIYRLDAVKGSEKLPFSLKVLLENLLRTEDGANITKKHIE ALAQWDAKAEPSTEIQYTPARVVMQDFTGVPCIVDLATMREAVKELGGDPSKINPLAPAE LVIDHSVQIDAFGTEQAIERNMDIEYQRNGERYQFLRWGQTAFDDFKVVPPGMGIVHQVN IEHLARVVMAREVDGVKRAYPDTLVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSM LIPRVVGFKLTGEIPSGVTATDVVLTITDMLRQHGVVGKFVEFYGEGVTAVPLANRATIG NMSPEFGSTAAIFPIDDVTLDYLKLTGRSEEQIALVEAYCKEQGLWHDPKNEVEYSEYLE LDLSTVVPSIAGPKRPQDRIELSDAKSQFAKDLPNYTKPGEEAKSVPVKMGDGREFELTN GSVAIASITSCTNTSNPSVMMAAGLLARNARKRGLNSKPWVKTSIAPGSRVVTDYYEKSG LLEDLEALNFFVVGYGCATCIGNSGPLEPEISQTIQDNDLVVTAVLSGNRNFEGRISPDV KMNYLASPPLVIAYALAGSMDFDFESQPLGKDADGVDVYLKDIWPTPEEVESVIETSIDT EMFDSKYSTIFDGDERWQAIETPEGNLFAWDENSTYVRKPNYFDGMSLEPDAVADVKGAR VLAKLGDSVTTDHISPAGSFKADTPAGQYLVANGVERKDFNSYGSRRGNHEVMVRGTFAN IRLQNQLLDGVQGGFTRDFTQEGAPQTTIYDAAMNYQKAGTPLVVLGGKEYGSGSSRDWA AKGTKLLGVAAVIAESFERIHRSNLIGMGVLPLQFPAGENAESLGLDGTEVFDIEGITEL NSGTTPKTLHVTATKEDGQKVEFDAVVRIDTPGEADYYRNGGILQYVLRQLVKKD >gi|294972313|gb|ADNU01000016.1| GENE 60 67655 - 68539 779 294 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394776|ref|ZP_06804991.1| ## NR: gi|295394776|ref|ZP_06804991.1| VPDSG-CTERM exosortase interaction domain protein [Brevibacterium mcbrellneri ATCC 49030] VPDSG-CTERM exosortase interaction domain protein [Brevibacterium mcbrellneri ATCC 49030] # 1 267 1 267 294 505 100.0 1e-141 MGTYFGEDIKISSAEEQTELREPGYEYFKQRNWSQGVIAITEANAKRMARPALRNPIVLQ GATVAVAVLSLVNFVAVFRRVRWFESDAEVFDSVTVNVNERVAGTDFILDEGFGAKIHNA SATLLRNYTDALDLRDSIKSTSFFALHALNLPLKKRIDEFSDKTDQIEYGAMHDDGTNTS AYLEQIANIREELTSRMTHIQDDVLARSGKQQRFIRDATEQTLRSNRARSRSLTGYFDMR SFYTPAAFSIGYNRGLRDYQSYKESRNSGGGGGTTTGYGSSGGGFSGAGSSSRF >gi|294972313|gb|ADNU01000016.1| GENE 61 68861 - 70798 1637 645 aa, chain + ## HITS:1 COG:Cgl1856 KEGG:ns NR:ns ## COG: Cgl1856 COG1154 # Protein_GI_number: 19553106 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Corynebacterium glutamicum # 1 635 1 630 636 662 54.0 0 MTFLERIASPADVRALSAAECQVLAKEIRDYLISIVSTTGGHLGPNLGVVELTTAIHRVF ESPHDTILFDVGHQAYVHKLLTGRYNDFPTLRQRHGMSGYPSRAESEHDVIENSHASAAL SWADGIAKAYQLRGELDRHVVTVIGDGALTGGMAWEALNNIGADKSEPPRKMVIVVNDNG RSYAPTVGGFAQHLDHLRTMGSYEKILSWGKEQLQESGPPGRAVYSAIHGMKRGLKDMVS SREAGMFDELGIKYIGPVDGHDLEAMERALHRAKKYEYGPVIVHAITQKGRGYAPAIQDE DDQFHAVGVIDPATGKATTKSSTSWTQVFGEEIVKAARKRTDIVAITAAMLKPVGLDKFA HEFPERVFDVGIAEQHAVTSAAGLSYGGLHPVVCLYATFFGRAFDQLLMDVSLHNQGVTF VLDRAGVTGPDGASHHGIWDMAMLQIVPNLRLAAPRDAKRLAEEFNEAIEIRDIPTVVRF SRGKVGSDIDALTRTSDGVDILAVPQGTDVENLESADILIVSVGALADRALAVKEALAKK GLSATVVDPRWVLPVPQSVLDMAAEHALVAVIEDGVKVGGIGSQIRQDLRDELVRTGVVE LGVPDSFLPHGTREEILSYAGLDIDDMVEKIMDMLPPELLKRVSE >gi|294972313|gb|ADNU01000016.1| GENE 62 70803 - 71960 916 385 aa, chain - ## HITS:1 COG:ML1040 KEGG:ns NR:ns ## COG: ML1040 COG0349 # Protein_GI_number: 15827504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Mycobacterium leprae # 2 384 19 428 429 245 39.0 1e-64 MLSEPEHGVPPVTDSPEALHTVATQLAHGHGPVGIDTERASGIRYGNRAFLVQLKREGAG IVLIDSEALPVLSSVNAALHGVEWILHAATQDLGCLAEKGMRPDALFDTELAARLLNFER FGLASLTEEIMGVTLAKEHSAVDWSTRPLPHEWLAYAALDVEVLNHLRTELADRLHAQGK WEYARQEFDHLLSFAPPVHDEPWRRTHGLGRVKTARGLGRVRAMWALRDDLGEDRDVAPS RILPDRAMIALATESVKSDKDIKRQFSRITAEDAGEFFRVIKAADRLPDSFMPPLRNAPR VGRADRETSKQRLEHMKPVIAQIAQELDMPHDLVVTPRYVKRLAALTTVGDEGDIADFLR EQGARPWQIELVARPLAKAAHAAGS >gi|294972313|gb|ADNU01000016.1| GENE 63 71963 - 72697 312 244 aa, chain - ## HITS:1 COG:no KEGG:AARI_19830 NR:ns ## KEGG: AARI_19830 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 45 242 6 209 212 176 47.0 7e-43 MPSSFQTWPAYRYTLTVQYAKSHVTSAWELHSPNRNTYIGSVVAPVPFTPEPFAQASDAL RRFCSSGATPHISLEEIPAPGRLAPWAFALNGDVDASAVPHTPSCEDEVATGRVVLLYDP SEPEAWNGQFRMVTYIRAELEHELGQEALLGPVAWSWLTDALETYDCDVTEVGGTTTRAL SESFGTLAARPATIDLEMRASWTPVVKQPKELEAHVHAWAHLLSTVAGVPPLPEGVSAFP GRLR >gi|294972313|gb|ADNU01000016.1| GENE 64 72696 - 73742 770 348 aa, chain + ## HITS:1 COG:Cgl0430 KEGG:ns NR:ns ## COG: Cgl0430 COG0407 # Protein_GI_number: 19551680 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Corynebacterium glutamicum # 7 336 37 374 374 359 56.0 5e-99 MVTLTRAALSESVERTPVWFMRQAGRSLPEYKKAREGIAMLDACLMPELTAEITLQPVRR HGVDAAIFFSDIVVPLKIAGMDVEIQPGIGPVFAQPVRTREDLARIPDLTADMCEAIAQA VTLTREGLPEDTALIGFAGAPFTVASYLIEGGPSKNHEKTKAMMLGDPELFSAILGKLAH MSATFIQAQLDAGAHAFQLFDSWAGYLNRADYERYVLPHSRTVFDALAHNNVPSIHFGVT TGELLGSMSTAGSSVMGVDFRVDLDDASKRVQPGQALQGNLDPALVFAPWDVIASRIEDI VRAGLRHGGHIFNLGHGVLPTSDPTVLTRIVEEVHTVSSRLIASGEFE >gi|294972313|gb|ADNU01000016.1| GENE 65 73739 - 75148 795 469 aa, chain + ## HITS:1 COG:SA1650 KEGG:ns NR:ns ## COG: SA1650 COG1232 # Protein_GI_number: 15927406 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Staphylococcus aureus N315 # 2 466 4 465 466 181 29.0 4e-45 MTTAVIGAGISGLTAAFELAQAGEQVTVYEANDRIGGSLVGSDLGGYAHGDVGAEASLYA RPETRELMQQLGLEPQYPSTEHKSQLLVGGQLMKIPAGTLMGVPGRHTDVTGVVSPAGVE RLQQEQLNRSQDDPSVGDFIAQRLGAEVVDTLVDPLLAGVYAGSAYHLSLRSTLPALLEA ARENTSVLDAVDQILASRKVTQGANIPGTTSRPVFVSLDGGMNGLARALYERCRELGVAF RLGEKVSRVRAGYSLTVSGQQGEIAEAADRVLIATPAPVAGRLLGSLGEHLGSSELSGVG ASLERVETADSAVVTAVVECASDLNGSGFLIPPKEPTFIKASTFASNKWPWLQARIPEGT AVVRMSVGRYRSTELATHTDEELAGKSVADWMSITGRSDRVLHTEVRRHMGALPQYQPGH ADMVSRVDSVVRTIPTLGLVGNAFEGVGIPACINRARHEARRLITERTS >gi|294972313|gb|ADNU01000016.1| GENE 66 75145 - 75849 710 234 aa, chain + ## HITS:1 COG:ML1045 KEGG:ns NR:ns ## COG: ML1045 COG3253 # Protein_GI_number: 15827508 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 15 223 9 220 231 253 59.0 2e-67 MKDYEAPSRQEAEELNEQIRYLSYSVFRVAEDLGDLNREDLAKELTEAIAHIDSVVVRGI YDVSVFRADADIMFWYHAPTVEDLQKVYAAIRTSALGSVLEPVWSVVGIHRPAEFNRSHV PAFLTDDDPGEYLCVYPFVRSYEWYLLEPRERGKMLHDHGKAAAGYKDIKANTVSGFALG DYEWLLAFEAQHLERIVDLMRDLRNTEARMHVRKEIPFFTGPRKELVDIISGWR >gi|294972313|gb|ADNU01000016.1| GENE 67 75899 - 76285 453 128 aa, chain - ## HITS:1 COG:Cgl1852 KEGG:ns NR:ns ## COG: Cgl1852 COG0229 # Protein_GI_number: 19553102 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Corynebacterium glutamicum # 4 128 8 132 136 169 62.0 1e-42 MERSEAEWREILSPEEFYVLRQAGTERPHTGKYVNETRTGTYSCRACGAELFSSETKFDA MCGWPAFFAPLAEDRVRYIRDTSLGMERVEVRCTACDSHLGHVFYGEGFNTPTDARYCIN SVCLTFEE >gi|294972313|gb|ADNU01000016.1| GENE 68 76370 - 77563 1132 397 aa, chain + ## HITS:1 COG:DR2478 KEGG:ns NR:ns ## COG: DR2478 COG1073 # Protein_GI_number: 15807464 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Deinococcus radiodurans # 65 395 77 401 407 139 28.0 9e-33 MTSHVPRGWRYALTGIGIGVGASLLVSAASSGLAVYFARRLIVPETAPEDVEILHVEGFD DNMIVHLSADEDVLVNGTYGLFFNSGQGHAQIGDIIEYDPVSQTVSREVISVTRGDLRTA RWGRITGVVYPHPSSTGLPYQDITLRSDAGELPAWFLPTTDPNPSDTWAILVHGRAGTRA EGLRAAGVLNDLGVPSLAIAYRNDTEVPRESTSRYGLGDTEWLDVDVAIDWALANGAKNV VLFGWSMGGAIVFQAASRGRHIDRVKGMVLDGPVVDWYNVVDHQARKNFLPTPVARLTLD MITRPWARPFTGLETPLDLDRMDWVRRAAELAVPVLLIHSEDDEFVPVGPSRALAAVRND LVTMPPWGKARHTKEWNVDPVQWNDDVANWMTRLLSD >gi|294972313|gb|ADNU01000016.1| GENE 69 77582 - 78358 595 258 aa, chain - ## HITS:1 COG:ML1340 KEGG:ns NR:ns ## COG: ML1340 COG1985 # Protein_GI_number: 15827698 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Mycobacterium leprae # 26 218 33 231 268 104 34.0 2e-22 MTSAKPSTELWAVLPQHRALPDTSGEPDLVDLYDSHVPAGGVRVQSNMVISVDGAVAGAD GLSRSVSTPADMRVFSVVRSLADAVVVGAQTVRSERLTRMSPKPAHLNQRHARGQTDVPI MVIVTSSGDLPWDRINERGTSPVWVATNTSDPQVLAELRRHADEVLTGIESPQAVKDALV ARGLRRLVCEGGPNVLAQWMDAGLIDEMCLTVSPKLHGTPGAPRLFGEGIATARDVEVLS LVTDGQSMMYRLKVRSAL >gi|294972313|gb|ADNU01000016.1| GENE 70 78355 - 79146 602 263 aa, chain - ## HITS:1 COG:CAC3676 KEGG:ns NR:ns ## COG: CAC3676 COG3786 # Protein_GI_number: 15896908 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 26 262 72 306 308 62 24.0 8e-10 MFAKKTVALALCTGGVLAALTAYPAVSDEQQNLQPPVVRTPSPATNDSPSQSTHLEAPRV SLGTDRVTQGLIPGVGPDTMAKLPSDARQVLVATSPRAADNTSTLNMYEYRDNEWQQVKS FASHNGRAGWRENRTEGDETTPAGVFSLSDAGGTLKDPGSKLPYSQDVNLSATAQNVYGP DYAQVFDYVIAIDFNRVTGTAPTNTERPQGKKIGGGIWLHVDHGKGTNGCVTVQKNEMAW LLRSLDPDKNPHIIMGDQAFISQ >gi|294972313|gb|ADNU01000016.1| GENE 71 79230 - 80198 717 322 aa, chain + ## HITS:1 COG:no KEGG:Cfla_1373 NR:ns ## KEGG: Cfla_1373 # Name: not_defined # Def: hypothetical protein # Organism: C.flavigena # Pathway: not_defined # 181 317 40 176 182 67 33.0 8e-10 MSNRDHERESLTRQIFVRPQTSDEPGDSSQEATRSLSLEELQEMGRQSKTDDYSAPTTQF TPSGPGAYGPSIQSQRSQQQQGTPQHSFPSPPVQPPPAQPPQTPPQQSQPQQPQPQHPQV YPHAEPTKPKRKVPGVAIAMVVIAVVVALGICGYIVVDQLQRSDGNTQSANQPGGDSGSV GEDESGDTGGSEEGAGEKSGDSEEGQDAEAKDVKAFMAPSSNIVCTIDADRARCTIREFD FDPGDAPNECDVDPFGSVVVVEKDGAGFSCVNRGLPTEANVLDYGESISAHGFTCRSGED GMTCESSEGHKFRVARAAAEFD >gi|294972313|gb|ADNU01000016.1| GENE 72 80378 - 82138 1848 586 aa, chain + ## HITS:1 COG:Cgl0250 KEGG:ns NR:ns ## COG: Cgl0250 COG0119 # Protein_GI_number: 19551500 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Corynebacterium glutamicum # 2 585 29 607 616 608 53.0 1e-174 MNNQKPSPMPFHKYKSFFDRIQIDLKDRTWPDQRITKAPRWLSTDLRDGNQALIDPMTPE RKRKMFDLLVKLGFKEIEVGFPAASQHDFDFVRQIIEEDAIPDDVRISVLTQAREDLIER TVESLVGAKKPTVHMYNATAPVFRKVVFGFKGNGYAETTDIAVRGTQAVMKYAESMLGDA DFGYQYSPEIFVDTEPQFAVDIVGAVMDQWGPDGERDTVVNLPATVERGTPNTYADQIEW FCRNIDNRDKIAISLHPHNDRGTGVAAAEMGLMAGADRVEGCLFGNGERTGNLDLVTVAM NLYTQGVDPELDFSNIDEVIHTVEHCNQIGVHERHPYGGDLVFTSFSGSHQDAINKAFKD REKKAQEAGIAVDNMEWDMPYLPVDPKDLGRSYEAVIRVNSQSGKGGVTYLLKSEYGLDL PRRMQVEFSKVVQNRTEKGGEVSARDMWQLFRDEYLPAEASDMQWGRFRPLSFKTESQSE EFDSRMTERIELAFLVDGQERSYVGHGNGPLDATVNVLNEHFGLDIRVQDYTEHAIGAGA DTMAAAYVEVSVGDRVLWGAGMHPNITRASIRALISAVNRAVRDNA >gi|294972313|gb|ADNU01000016.1| GENE 73 82162 - 82863 536 233 aa, chain + ## HITS:1 COG:ML0633 KEGG:ns NR:ns ## COG: ML0633 COG1381 # Protein_GI_number: 15827261 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium leprae # 7 231 16 241 268 204 50.0 1e-52 MVGHTKLGEADLIVSILTRDHGLVRAVAKGVRRTKSRFGSRLDLFMMVDFQAHIGRNLDI VTQVELIEPFGHGIVGDYDVFAAAAAMAETAAKLTENEPNTRDQYLLLSAALRSLCNREH PPRLALNAYLLRAMRTAGWEPGLDACVSCGAPGPHRAFSFNSGGVVCVACRTAADTNAGE DATVLLHNLLNANWAQAHVAQAHAVNRASRIVYDYVQWHLERRVKSLNLVEVQ >gi|294972313|gb|ADNU01000016.1| GENE 74 82860 - 83636 465 258 aa, chain + ## HITS:1 COG:Cgl2231 KEGG:ns NR:ns ## COG: Cgl2231 COG0020 # Protein_GI_number: 19553481 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 15 251 7 243 243 329 65.0 3e-90 MSQAIPRHPSGATPPDIPQHILPTHVAVVMDGNGRWANERGLPRTEGHKAGEASLLDVIY GAMEIGVKYLSAYAFSTENWKRSPEEVRFLMGFNRDVIRRRKEELHAAGVRIVWAGRRGR LWRSVIKELEDAQELTKNNTALTLQFCVNYGGRAELVDAMNAAVEDAVAGRIKPGKLTER SLHSRLYNPDIPDVDLFLRSSGEQRTSNFLLWQSAYAEMVFQNVLWPDVDRRTLWDAILE YAQRDRRFGGAVDKPQNT >gi|294972313|gb|ADNU01000016.1| GENE 75 83633 - 85378 221 581 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 360 562 41 249 329 89 32 6e-17 MNARTLLSQLVAPQKWAIALDVVLTVCATVANVIGPVFIARAIDSGLPHAQAGDFTPLIN NLGIFLTVTLAGGIATFASNRYTGYIAQRIVYNLRMRMYRHVQSADIAYHESTTSGRLIA RQTSDMESVQTFLSYGLIETVFAVLHMVAIAIMLLFLNVPLALVVLVGLVPLAGITVWAG RRQQTAYRATRTAIAQVIGHFTETMGGIRAVQAFRRQPAGRAKLTAEDSGYRDANAHALR AMAAFSGLTRLVTNVCQIAVILVGAFMVINGHTEVGVLTAFLMSLRRFYGPLDELVQNVN LYQSAKAALEKIAAVLAVSPTVTTRPGSEKELPETTSGRRIEFTGVEFAYADGTTVLPRM DLTVGAGQTVALVGATGAGKSTLVKLITRFYDPSEGVVSVDGVDLRDISDAELRRNIVMV TQESFLFSGSIADNIRVGKPDATDAEVEDAARAVGLHDYVAGLPDGYNTDVKKRGGRLSS GQRQLVSFARVFLADPRVIVLDEATAHLDIPTERLVQKALESVLADRTAIIIAHRLSTVA IADRVLVIDAGRVVEDGTTDELIHARGRFSQLHSAWRDTLA >gi|294972313|gb|ADNU01000016.1| GENE 76 85375 - 87120 213 581 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 345 569 131 354 398 86 30 5e-16 MKSLARFWPDLRARAGIYTFVCVLAFVAVALPLVVPVITGRIIDGPVAHGDVAGLWGPVA FLMVVSIAEVVALWVRRHAVAGIVSKWEITWRHRLFDHLQYVPVSTHDAWESGQLLSRAV NDMSQMRRFFAFGLPFLVCTPLAIIAGEIILTVINPWFGLIMLVAAVPTVIVIVVFERKY RITSRAAQDALGEVTTAVEESIHGLRVIRSFGRSPWMTLRFKALALTVRSREINKTKLDS WLFSVMNVVPALAQIVIVGLGTWGVVQGWITVGQVVAAVTTTMVMRIPIENFGFLLSDFL MSVTAATRYWEVMDLPVSIADPHAGTGTSAIDDEPHVPHVRGELTFDNVRFRFDDASTDL LTGVNLHVEPGTTVALVGATGSGKTALAAMVPRLADVTSGRILIDDTDIRDMPVNTLRSL VSVSFEDPLLFSASVADNVRLGKPDASDAEVWDALEITQAADFVRELPQGLDTQVGEQGM SLSGGQRQRIALARAIIGSPRIIVLDDPLSAVDVDTEDRVQTRLARVLPDSTTIIVAHRP STAALADRVAVLVDGTILTEGTHEQLLATSAVYRDLMGGDA >gi|294972313|gb|ADNU01000016.1| GENE 77 87133 - 88893 1851 586 aa, chain - ## HITS:1 COG:Cgl1130 KEGG:ns NR:ns ## COG: Cgl1130 COG0513 # Protein_GI_number: 19552380 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 4 552 92 664 732 582 55.0 1e-166 MGNATEQASENTDIRFSDFDLDERVARAVADLGYESPSPIQAKTIPFLLQGRDVIGLAQT GTGKTAAFALPLLSSIAGRERPTSPLALILAPTRELAIQVAEALTSYATHLGDFSVLPIY GGQSYTPQISGLKRGAHVVVGTPGRVIDHIKRGTLDLSHVEHLVLDEADEMLKMGFQEDI EEIFAKTNPDRQVALFSATMPASIHRITGQYLNDPAEVRIQAKTTTSANIRQRYLTVMHS HKLDALTRILEVEKYDGIIMFVRTKQETEELADKLKARGFSAAAINGDIPQVVRERTVEA LRSGSIDILVATDVAARGLDVERISLVVNFDIPHDTESYVHRIGRTGRAGRTGEAILFVT PRENRLLKAIEKATRQKVEPLVMPTVEELTVTRTQKFQDRISHTLNSQDLSELRPVIEEY VNTHNVPAEDVAAALASLVLDGATLTAEPLPEPQARASRNERARTADGMTTYRLAVGRMD KVNPGAIVGAIANEGGISSQQIGNISIRSNHSLVDLPQDLDASVLKRLSKTKVAGRHIDI RPDRGRPGRPFKKRSNDKGAGEGRKFGKDGFRGRKGNNFGGKKFKK >gi|294972313|gb|ADNU01000016.1| GENE 78 89137 - 90513 1412 458 aa, chain + ## HITS:1 COG:ML0826 KEGG:ns NR:ns ## COG: ML0826 COG0423 # Protein_GI_number: 15827364 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Mycobacterium leprae # 1 453 5 457 463 697 71.0 0 MASTLDSVITLAKRRGFVFQAGDIYGGSRSAWDYGPLGVELKENIKRLWWQEFVRGREDM VGLDSSIILPRQVWEASGHVETFVDPLVESLHTHKRYRADHLIEAYVAKHGKEPENGLAD INDPETGQPGNWTEPQQFSGLMKTFLGAVDDGQGLHYLRPETAQGIFVNFNNVVTAARRK PPFGIGQVGKAFRNEITPGNFIFRTREFEQMEIEYFTHPDDAQKYFDEWVDACWNWFVDL GINPDNMRKFDVPADERAHYSDATIDLEYKFGFQGNPWGELMGVANRTDFDLSNHTEASG AKLQYFDQATGDRYTPYVIEPSFGLTRSMMAFLVDAYSEDEAPNTKGGTDKRIVLKLDPR LAPVKAAVLPLSRNEKLSPQARALAANLRKRWNIDFDDAGAIGRRYRRQDEIGTPFCITF DFDSLDDNAVTVRKRDDMSQERIAIDDVENYLAQGLGC >gi|294972313|gb|ADNU01000016.1| GENE 79 90582 - 91646 946 354 aa, chain + ## HITS:1 COG:Cgl2787 KEGG:ns NR:ns ## COG: Cgl2787 COG5438 # Protein_GI_number: 19554037 # Func_class: S Function unknown # Function: Predicted multitransmembrane protein # Organism: Corynebacterium glutamicum # 72 346 127 407 419 134 35.0 3e-31 MLVALAPFALLTIVGVIVYWPHHVESTDDRDIYTVTVTAVDAGKCQEAVTPACVTVKAGD TVVKLPQEASIPEVSDTLRVVDGQTDEEVVFIDYDRRVPLGVLGAIYVLAILVVAGFRGA RALIGLSIAMVVIVGFMLPSILSGHSAIGAGLTSSAAILFSVLYLAHGLSARTTVALIGT LAGVAISGVLAVIWTRWAHLGGLYTDELFILNTYYELSASDIVICGVLISGIGVLNDVAI TQVATVWELAQTAQVSSVRSLFRSAMRIGRDHIASTVYTVVFAFAGSSLAVLLVTVTSGA NLFTQLTLGEMSAHVVLTLVTSIGLVCAIPLSTLIAAFVVTSDDDASHHLRENA >gi|294972313|gb|ADNU01000016.1| GENE 80 91740 - 92492 596 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 9 247 1 242 245 234 47 2e-60 MTDQTSTPLVEITGVEKYYGDFHALKNVNLTVDKGEVVVVIGPSGSGKSTLCRTINRLET ISEGSISIDGKDLPQEGAELAALRSDVGMVFQSFNLFAHMTILENVTLGPIKVRKMSKKD ADELAMQLLKRVGVDHQAQKYPAQLSGGQQQRVAIARSLAMKPKLMLFDEPTSALDPEMI NEVLDTMVNLAKEGMTMVVVTHEMGFARKAANRVVFMADGEIVEVAEPEEFFTNPQSDRA KDFLSKILTH >gi|294972313|gb|ADNU01000016.1| GENE 81 92503 - 93390 1179 295 aa, chain + ## HITS:1 COG:Cgl1906 KEGG:ns NR:ns ## COG: Cgl1906 COG0834 # Protein_GI_number: 19553156 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 56 292 39 286 295 174 45.0 2e-43 MKKVTTLVAGLAVGILALTGCGKEGAPGEQGSGGEAPEYKVAEGVDLADSPTWKKAKDAG KIKVGVKYDQPGLGNISAGADKPEGFDIEIAKMVSASLGFKADEIEFVETVSANREPFLQ QGNVDMIVATYTINDKRKEVVDFAGPYYVAGQDLLVKADSDIDGPDSLAGKKVCSVDGST PAQNIQEKYKDAELVTYDAYSKCVTDLQSGNVDAVTTDDAILRGYAAQYKDEFKVVGKPF TEEPYGIGLPKDDKALRDAVNDALEASKDSGDWKKAFEYTLGDSSGVEQPQPDRY >gi|294972313|gb|ADNU01000016.1| GENE 82 93445 - 94107 619 220 aa, chain + ## HITS:1 COG:Cgl1907 KEGG:ns NR:ns ## COG: Cgl1907 COG0765 # Protein_GI_number: 19553157 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 3 206 5 214 228 149 46.0 3e-36 MDFADIVMLFLSGVWGTVKLFGVTLVGCLVLGSILAAMRVSPTPVLRAAASVYITTVRNT PLTLVMFFCVFGLPFLDIRASHDSAINSFVLACVALIAYTSCFVAEVLRSGISTIPVGQA EAARAIGLNFGQTLRYVIMPQAFRTVIPPLGSVIIAMLKNTSIASAFNNREIISAMRNAI EMRGDITLLVIAGAAVSYLILALILGRVFTILENKWVIHR >gi|294972313|gb|ADNU01000016.1| GENE 83 94104 - 94934 939 276 aa, chain + ## HITS:1 COG:Cgl1908 KEGG:ns NR:ns ## COG: Cgl1908 COG0765 # Protein_GI_number: 19553158 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 7 262 9 271 315 170 39.0 3e-42 MSASTQVLFDEPGPKGKRNNVILSIVSGVLLLGIVAFVVWKFSAAGQLDAAKWEPFAYAT IQKALFKGLLATLKVAVVASVLALILGVVFALLRLSSKKWISVPATLVLEFFRGLPVLLL IFATYLLFGKTIGSFWPVVIGLTLYNGMVIAEVVRAGILAVPRGQREAAQSIGLSDSQTM SLVLMPQAFRAMMPTLIAQIVVLLKDSALGYMVTYQDLLHQVNIIGRQYGNLLPTFIVGA VIYIAINLIVAGIARWLESRMQRKTAATTGTSKGED >gi|294972313|gb|ADNU01000016.1| GENE 84 94939 - 96288 1111 449 aa, chain - ## HITS:1 COG:no KEGG:Nwat_1557 NR:ns ## KEGG: Nwat_1557 # Name: not_defined # Def: L-lactate permease # Organism: N.watsoni # Pathway: not_defined # 1 419 1 441 489 156 37.0 1e-36 MNPLLASVPLVLPCVLLACRLSPTVAGVCAVGAAVLVVLFTGAPLDWPSLPDYLGITAEV LFILLNGMILARLMQISGAMRSIGNWVSNATPGIGAGTAFVVFGVVPFVECVTGFGIGVT VGVPILVTLGHKPAKAALFGLLGLCAVPWGALAPGTAVASSLTGFDFTTLGVMSGWYNSV VLVVVALTVAWGTGLARAALPTFASAGFLWGSILVTNLLIGTPLAGVIGSALLMGLSLVV YRLGGARIPAPPVRELVPYAVLAGGLLCASVLAMFVPALEWLALPPVWLAVACVVAYRVL PGQSGMIAEVPEALRSWVPIGVSTGLFMILGWVMAASDMSTAIGEALSPAGAWPGPLLGA VGSILTGSNTASNAMFAPTIATLSVTGSLSVVAAANVAGSFMILAAPPRVLMAVTLAGDR ESYGRTLMCAIAIASAPPLVGAVALAIWL >gi|294972313|gb|ADNU01000016.1| GENE 85 96419 - 96964 536 181 aa, chain + ## HITS:1 COG:no KEGG:Bcav_3583 NR:ns ## KEGG: Bcav_3583 # Name: not_defined # Def: hypothetical protein # Organism: B.cavernae # Pathway: not_defined # 1 144 1 144 179 116 47.0 5e-25 MLTEFVRDQAFAIAWLAVMAAGWFGWSQEDPKPRLRGWLGAGSVIGLLFAIAFGILVWRN WSTPTMLEGRYWVFGLVVLAETVIIGGGCIVLARRKQTRWYGWWIGLCVALHFVALVWVF EDWSYLVLTIVQVIGLLLMLPALRRGTYATSRWACPWIAVTFLLFAIVSGINFLIKHGYP F >gi|294972313|gb|ADNU01000016.1| GENE 86 96991 - 97923 713 310 aa, chain + ## HITS:1 COG:DRA0007 KEGG:ns NR:ns ## COG: DRA0007 COG1131 # Protein_GI_number: 15807679 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Deinococcus radiodurans # 33 309 14 293 301 182 39.0 7e-46 MNENSSVTCSDADTPALEIRHVLKSFRGPKGKQVRAVNDLSLTVGQGEIVALLGPNGAGK TVTLDMVLGLSQPDSGSLRVLGVSAKEAVRLGHVSAILQTGALLGDLTVKETVQMIASTH TNHIGADEAINRAGIEALAHRRVSKCSGGEQQRLRFALALLPDPRLLILDEPTTGMDVNA RTAFWETMRSEATEGRTIIFASHYLKEVEDFAQRTVLMAHGQIIADGPTSEMRSRLGGKT ITAHLEADFDISQLPGVTNIQRSGDRVELTCDDADSAARYLLTETTACDLEIHTASLDSV FALLTTKENS >gi|294972313|gb|ADNU01000016.1| GENE 87 97920 - 98699 609 259 aa, chain + ## HITS:1 COG:no KEGG:AARI_29060 NR:ns ## KEGG: AARI_29060 # Name: not_defined # Def: putative ABC drug resistance transporter, inner membrane subunit # Organism: A.arilaitensis # Pathway: ABC transporters [PATH:aai02010] # 9 259 5 251 251 163 38.0 6e-39 MSTILNTGYIWIDLKRNLRQYVGLFFAVFLPVFMFVIFGTMADFSSNELGSGRGNVTASI MVNMGAYAAITATTGLAGSAAVELQQGWGRQIGITPFPTAGFITSKVVVALTYSILAVGA VYVTGLFVGTRMDAWVWPATFGLLILGAVTFALYGLAFGLLFRSEAAVSAASGLVVVMMF LGNAFMPLSGILLKVSVFVPVWGITRLAAYPLDQGESFDAATGDVIQYEFWQILLNVVAW SIVFAVLCVIGARRGTGRK >gi|294972313|gb|ADNU01000016.1| GENE 88 98710 - 99768 620 352 aa, chain + ## HITS:1 COG:CC1149 KEGG:ns NR:ns ## COG: CC1149 COG4585 # Protein_GI_number: 16125401 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Caulobacter vibrioides # 82 347 104 385 399 117 31.0 4e-26 MNARNMYGLIWLVFLIIPLVLVWTLHPVAVGWKVLGTCGTVLFGVVYCWIAVSGQKPFDR VEPLKIRHVVAAAGLLLIPVCLTIPSLGVAVTSFAPYFASLGVFGLSFVAALCWSTATLF FTVAVPLIFSPQSFLMSVAGPALVILCLTLVKFIEVREVAEQKMKNELDLVKEREAISRD VHDMLGHTLTVVSLKSQLALKTVHTDPARCEAELRELMTLNQRALEDVRTTVGRLRTPDL ATQVDEAENAMRAAGVHVTRQGDWATWDPERRAVVAWAVREASTNIIRHANATSCTLAFD DNGVTVTDNGNGLEGSREGHGLTGLRRRVDEAGGTVTLSDMGDGTELRVEFA >gi|294972313|gb|ADNU01000016.1| GENE 89 99765 - 100373 462 202 aa, chain + ## HITS:1 COG:BS_yocG KEGG:ns NR:ns ## COG: BS_yocG COG2197 # Protein_GI_number: 16078980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 3 202 2 198 199 181 47.0 1e-45 MTINIAIADDQALVRGALSALLGLEPDITVVGEAASGTDAVDMCLNNSVDVALFDIEMPG LNGIEATRELHDKGCDTKVLIVTTFGRPGYLQRALAAGAKGFVVKDAPAEELAEAIRKVH RGEQAVDPSLAIESISLGPSPLTEREREVLAVAHTGASVRTIADSLFLSEGTVRNHLSSA ISKLGVDNRSTAAIEAAKRGWL >gi|294972313|gb|ADNU01000016.1| GENE 90 100427 - 101602 513 391 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 17 336 28 342 353 202 38 9e-51 MTAVIERPNVPATPPALSIGPIELDSPVVLAPMAGITNTAFRRLCREYGAGLYVTEMVTT RALVERSPKSMRIIHHEPYETPRSVQLYGVDPVTVGQAVRMLVEEDRADHIDLNFGCPVP KVTRKGGGSALPWKIDLFTAIVTTAVREAGDIPVTVKMRKGIDADHLTYLDAGQIAARAG VAAMTLHGRTTADLYSGTADWDAIARLKDTIGDAIPVLGNGDIFSAEDAQAMMAKTGCDG VVIGRGCQGRPWLFGDLQAALNGSDERIRPNLGEVAQTVYTHGVYLAEYYDDEFYGVRDL RKHIAWYFKGYPVGGDLRKRLAHVSSLEELRALLDELDHTAPYPGEAAEGSRGRTTRAKR PHLPDGWLSSRTFSEDLREELSLAELDVSGG >gi|294972313|gb|ADNU01000016.1| GENE 91 101603 - 102883 900 426 aa, chain + ## HITS:1 COG:ML0831 KEGG:ns NR:ns ## COG: ML0831 COG0232 # Protein_GI_number: 15827365 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Mycobacterium leprae # 4 408 8 416 429 293 44.0 4e-79 MLVSQTGEYSGTDRERWVDEAAKNPRRSAFQRDRGRVLHSSGLRRLAAKTQVVSPGTDDF VRNRLTHSLEVAQVGRELGRYLGADPDIVETACLSHDLGHPPFGHNGETVLDEVTKDIGG FEGNAQTLRVLSRLEPKVLLEDGRSAGLNLTRATLDACIKYPWSRAEAPTPKSASGSIRK FGVYDDDRDVYDFVREGRDSGTRCIEAQIMDVSDDISYCVHDVEDAVNSGHLNLFAYTHD EALAGLIDVTRSWYMPGARDDDIVAAFDRLQAAKYWPKEPYDGSRRAQATLKHMTSQLIG RFTSATEAATREEYGWEPLTRYAGNVVVPAATRHEIAVLKGLATVTVMVAEDRVRLQRIQ AGVLRDLCDYYMTHPESMDTMFWCDYRDAEDDSAKVRIVVDQVASLTDHSAWAEYHKMQA NTATLL >gi|294972313|gb|ADNU01000016.1| GENE 92 102898 - 104775 1289 625 aa, chain + ## HITS:1 COG:Cgl2216 KEGG:ns NR:ns ## COG: Cgl2216 COG0358 # Protein_GI_number: 19553466 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Corynebacterium glutamicum # 3 621 6 626 633 507 44.0 1e-143 MVGRIGREDIDEVRSRSPIDEVVGEYVSLKNAGIDSKKGLCPFHDERTPSFNVRPSIGRY HCFGCGKSGDVFEFIMEMDGLTFVEAVQRLAERAGVQLSYTGAPSGDSGSVRQSIMEMHQ VAADFYREQFASPVASVAREYMAGRGFEQQTLDTFGVGFSPQGWDGLLSHLRGRGFRVED MEKGGLVIAGRRGHYDRFRGRLMWPIRDVTGRVIGFGARKLFDEDQGPKYLNTPETPVYH KNKVLYGLDLAKRPIAKTKRAVVVEGYTDVMAAHISGVTQAVATCGTAFGSEHVSILRRM MNDDATAEVIFTFDGDEAGQKAALKAFGDDQRFLAQTSVVVEPGGRDPADLWKEKGEGAV RDLIESRRPLFEFVIDMTVAQFDASTVEGQVAAIRAAAPVIAGIKDVALRPGYERYVAGL VGVDTDQVVRAVRAYQRNQNQRQQSNQQQPNQPQHQFQQATQSPLSGPDPTQSAGYRVER GALMVALQYPQYVNAKLFDALNGKVFDDPRHRAIHEAMKQAGGVRSGAEYPARWADAVRE ATPHELVPLVSELTMAPLPATNADGIERYSRGIVARLFDKDMVRISGLLHARLRRTDPND TATTSELLQQLTLLEQQRVHLRQFM >gi|294972313|gb|ADNU01000016.1| GENE 93 104778 - 105392 454 204 aa, chain - ## HITS:1 COG:Cgl2870 KEGG:ns NR:ns ## COG: Cgl2870 COG2197 # Protein_GI_number: 19554120 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 1 203 1 212 212 165 49.0 5e-41 MIRVLLVDDHPVVRAGLSAVLNTGDDIDVVAQAGTGREALDILASTQVDVVVSDIQMPQM DGVELTAELGRMGGPPVLILTTFDTENLIVAAMNAGAQGYLLKDAPPEELTRAVRAVNEG RPVMSDEVTVALTRRLTQPRTSLSARELEILQAVATGHTNKEIAQELFISQATVKTHLVH IFDKLGVDNRTSAVAKAREQQLID >gi|294972313|gb|ADNU01000016.1| GENE 94 105389 - 106573 784 394 aa, chain - ## HITS:1 COG:Cgl1964 KEGG:ns NR:ns ## COG: Cgl1964 COG4585 # Protein_GI_number: 19553214 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 83 390 67 369 377 130 30.0 6e-30 MSHSQLPQILRAMRVTLHVAFAVMLGVGVVRFIVTFDQHPAVLMMILILTLMLAGLYLVG TVAEMQHSKHPERFNPIPLRSWWLAAILILWAGLMLSSMSFAWVSFPLFFIVLHAYRPYV AAPVILVMLFTILASSYRHGVFNTGYLLGPTIGACVATVVSILYQELRKEAEAMGNAYEE LQRAQTQISLSQHRAGRLAEREKLAADVHDTLSQGFTSILLLSRSLEPHVDTSGRETLHL IEDTAQSNLQQAREFLHGSPLGTSDLHPTLRAECHAVERASTAVGADIDCEFEVTGDPYP LTPEVKQSLIRATQSLLSNVSFHSRCTRAKVTLAYWDAHVSLDVVDNGVGFAGAYGYGLR ALTERVASVRGQLSVETAVGEGCSVHIVIPVEDR >gi|294972313|gb|ADNU01000016.1| GENE 95 106575 - 108050 1035 491 aa, chain - ## HITS:1 COG:DR1928 KEGG:ns NR:ns ## COG: DR1928 COG0554 # Protein_GI_number: 15806927 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Deinococcus radiodurans # 3 490 6 496 501 480 49.0 1e-135 MGYVLSLDEGTTSTRAVIFTEDGRTVAQSSQEFTQHFPRGGWVEHDPLEIWRTSRQVIGS ALGKAQLTGADIACVGVTNQRETTVVWDASTGRPIYPAIVWQDTRGSEYVEQLSENADDI AAITGLPVNTYFSAIKLMWILDHVEGARARAEKGELRFGTIDAWLLFNLTGEHVTDVTNA SRTMLMDIRTGQWSQHMLDLTGIPEHLLPRICPSVGELGTVRSNQLLSGTAVTGVLGDQQ SAAFGQVCFSPGDTKVTFGTGCFLLTNTGTEIVRSNHGLVSTVAYQIADGPLQYALEGSI AVAGSLVQWLRDNLGVISSSEQVETLAASVEDSGGVFFVPAFAGLFAPRWRPDARGTIVG MTGFTTAAHIARAALDSTAFQAAEVVDALVSDVGTDLRAIRVDGGMSVNDAFLQFQSDIL STPVVRPKETESTAVGASFAAGVGAGLYSHGDVASLWRKDREFVPHMDSRTREHLRARWN EAVERSLNWEH >gi|294972313|gb|ADNU01000016.1| GENE 96 108053 - 109486 1645 477 aa, chain - ## HITS:1 COG:Cgl0913 KEGG:ns NR:ns ## COG: Cgl0913 COG0057 # Protein_GI_number: 19552163 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 10 476 6 474 480 608 66.0 1e-174 MSEVANTKLQEWNTKSELAEQILPGVGRLFRNNDVLLTIYGRSLLNKSTIGIVKAHRYAR HFDGKDLDLNETLAIVNELQKLNLTGARLDLGRLAAGYREAGGDLGEYLKNELSTVIDGP ESPEPRDVVLYGFGRIGRLVARILVDRNGGTGMRLRAIVVRKNGENDIIKRASLLRRDSV HGKFDGSITVDEENNTILANGVLIQVIYSSDPSTVDYTQYGINDAIVVDNTGRWRDEEGL GQHLKAKGVGKVILTAPGKGDIKNIVYGVNNSAIEDSDTILSAASCTTNAITPVLKVLND EYGVKNGHVETVHSFTNDQNLIDNFHKGARRGRAAGLNMVLTETGAAKAVAKALPELKGK LSGNAIRVPTPNVSMAILNLNLERETTVDELNTFLRNTSLHSSLRNQIDYINSPEVVSTD FVGSKRAGVVDGLATIVDGDRVVVYVWYDNEYGYSCQVVRCLADMAGVDFPALPKRA >gi|294972313|gb|ADNU01000016.1| GENE 97 109575 - 110612 1113 345 aa, chain - ## HITS:1 COG:YPO3985 KEGG:ns NR:ns ## COG: YPO3985 COG1295 # Protein_GI_number: 16124112 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 314 32 346 360 149 31.0 8e-36 MSHVALLTKRSSALARSQQLLNKPFVVHLKDTVTRFGARLGNQFAAAITYFLVLAIIPIL MFAFAILGFTLDVLKPEWVGVVNDWITETAPGQDELVAMLQNFLDNWQAVGIVGVLSALF TAQGFIGNLKDAIRAQLTDDMDDIPKEPFLARTFNNVYTLLGILVLVFLTLTATVLGTGL QSAIASWLDLPGWFAVVFNILTIALTVAMNWLLFMFVFTTIPDKKIPMRTRAIGSLTGAL ALAVLLNLATVLISIFSGSPTAALFGPIIAIMLSMNLFIRILLMVAAWMGTSHDDRVFAK VPEGKPVQTEQQDDIDMTSSLLAVLTAVGLIFLTLFGLKRYEGRE >gi|294972313|gb|ADNU01000016.1| GENE 98 110623 - 111675 1141 350 aa, chain - ## HITS:1 COG:PA0141 KEGG:ns NR:ns ## COG: PA0141 COG2326 # Protein_GI_number: 15595339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 77 340 16 279 298 377 67.0 1e-104 MSEHTPTNDTETTAPHNVKDGVEADAKQVDSTKADASQNESAEETPKFELTPEGIPDFAN EIDSLRSLQRQVEGTKSKSKAWKKGYPYRTKMARPAYEREKRKLQIELLKLQTWIKETGE RVVIIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPTEREQTQWYFQRYVQHLPAAGE IVMFDRSWYNRAGVERVMGYCTPAEYLDFTRSCPQFETMLVNSGIKIIKFWFSVGREEQL HRFTSRSTDPVKQWKLSPTDLASLDKWDAYTEAKEAMFFYTDTAQAPWTVVKSNDKKRAR LEAMRHVLAQFDYPNKDRRIARRPDLLLVGHPKDIYDQGEGPADFSALEI >gi|294972313|gb|ADNU01000016.1| GENE 99 111745 - 113562 1601 605 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 5 599 1 597 600 468 43.0 1e-131 MSATMSSSSTPLTFDLPERDTITDVFVARVASDPHAHMLSLLENDREVAISAQQFHREVV EVAKGLIAKGIKPGDRVGIFGATSYEWTTYDFAIWFAGGVSVPFYDTSSEDQLAWILKDT DLTFVVAQSQDHSDRVAQAAQASGIEATLDISVWDEEGRRSLVAAGRDVTAEAVEAARSS RSKSDDATIIYTSGTTGRSRGCVLTHANFVDTAASAAVQINQVVTPGARCLLFIPTAHVF ARFIEVMSILHGVTLAHESDLTRLTEALGVFRPTFILGVPRVFEKVFNSALQKAEAENKA PIFRAAEAVAVQYSVALSEGKVSPWLKAKHKFFDVLVYSKLRAVLGGQATHAVSGGGPLG FRLGHFFKGIGVDILEGYGLTETTAPIAVNTPGKSKIGTVGVPLPGNTVAVAPDGEILAK GVSVFKEYLNDPQATQDAFIDGWFCTGDFGTLDEDGYVSVTGRKKELIITAGGKNVAPAP FEDELRRHPVIGQAVVIGEGKKFVSVLIFPDMEMLPAWLENRGLPALSLEDVPGNEKINE SVSRAIEVANRRVSRAESIREYRIVPAQLTEQNGYLSAKQSVKRHIVNKDFSSYIDDIYG PENAR >gi|294972313|gb|ADNU01000016.1| GENE 100 113771 - 116599 2774 942 aa, chain + ## HITS:1 COG:Cgl2961 KEGG:ns NR:ns ## COG: Cgl2961 COG0495 # Protein_GI_number: 19554211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 940 1 950 952 1110 58.0 0 MSNAPEQPTYRYDAQLAGDIELKWQDRWEEDGTFASSNPVGDLASDNRNLGAPMYLMDMF PYPSGKGLHVGHPLGYLATDVYARYQRMLGRNVMHALGYDAFGLPAEQYAVQTGQHPRIT TNQNIDNMRRQLRRLGLGHDPRRSFATTDPEFVKWTQWIFAKIFDAWYDADAAKARPISE LIEQFETGARDTGRGAWAELSPREREEVLQDYRLAYVSESPVNWCPGLGTVLANEEVTAE GRSERGNFPVYTRKLKQWNMRITAYADRLDADLGTVEWPEAVKHMQRNWIGKSVGALVRF TGHSVPQLEVYTTRADTLFGATFAVLSPEHPLVDEFVTATWPEDVNPAWTQGAATPAEAV AEYQRAAAAKTPAERQEDKNKTGVFTGSYVKNPATGHNMPVFVADYVLMGYGTGAVMGVP AEDSRDWDFAKAFGLPYIRTVEPPADHDEDQPYLGEGRKINSANEHIDVNDVDVDQAKNR VVQWLAEQGLAQQTTQYRLRDWLFSRQRYWGEPFPIVYDEEGTPHLVPEDQLPVDLPELE DFSPKTFEPDDVDSEPEPPLGRNHDWVSVELDLGDGLKTYTRETNTMPNWAGSSWYQLRY ADPHNSNALVDPENEKYWLGPRDDKKPGGADLYIGGVEHAVLHLLYARFWHKVLYDLGYI SSFEPFYKLINQGYIQAYAFTDARGVYVPANEVEEKENGTFWYQGEQVTREYGKMGKSLK NMVTPDEMYEEYGADTFRVYEMSMGPLEVSRAWETRAVVGAQRFLQRVWRLVVDEDSGEL KVTGQPADEETLRVLHSTIAGVRDDMDNFRFNTVVAKLIVLTNHLTKVGVSPRDVIEPLV VMLAPLAPHIAEELWSKLGHDDTITYAPFPEVDERYLVEETVTCVVQVKGKVRDRLEVSP DISDEELEKLALASKGAQRSLDGAEVRKVIVRAPKLVNIVPM >gi|294972313|gb|ADNU01000016.1| GENE 101 116690 - 117517 562 275 aa, chain + ## HITS:1 COG:DRA0201 KEGG:ns NR:ns ## COG: DRA0201 COG0171 # Protein_GI_number: 15807867 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Deinococcus radiodurans # 12 272 19 279 287 315 62.0 8e-86 MNVSPEEIRLALGVSPSIDPRGAIQRRVQFLVDYCLTTGTRGFVLGISGGQDSTLAGKLC QLAVEELRRRDYDATFVAMRLPYRLQQDEQDAQDALDFIEPDRVVTFNIGEATDEVSKEF TTAMGHETSDFNRGNVKARMRMIAQYAVAGDLGLLVVGTDHAAEAVTGFYTKFGDGGADV TPLAGLTKRQGREMLQELDCPEHLYLKVPTADLLDDQPGQTDESALGLTYENIDDYLEGK PVSDDTAFTIEDKYRRSHHKRVMPVTPADTWWIRC >gi|294972313|gb|ADNU01000016.1| GENE 102 117544 - 117897 228 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394819|ref|ZP_06805034.1| ## NR: gi|295394819|ref|ZP_06805034.1| camphor resistance protein CrcB [Brevibacterium mcbrellneri ATCC 49030] camphor resistance protein CrcB [Brevibacterium mcbrellneri ATCC 49030] # 1 117 21 137 137 189 100.0 7e-47 MLIAVVLAGGVGAVCRWACDTALSRWLNASWPAAVFLINVAGSFFTGVLTGATVDFPVFS VCVTGFCGAFTTFSTLMVGWLELTLRKRPVHGVLYLGGTLLACVLSVWLGLAAGSHL >gi|294972313|gb|ADNU01000016.1| GENE 103 117891 - 118265 153 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394820|ref|ZP_06805035.1| ## NR: gi|295394820|ref|ZP_06805035.1| camphor resistance protein CrcB [Brevibacterium mcbrellneri ATCC 49030] camphor resistance protein CrcB [Brevibacterium mcbrellneri ATCC 49030] # 10 124 1 115 115 166 99.0 5e-40 MSRLLPPLLVFAGGALGTCVRVAVFQFGETAGLITVNTAGTLILAFLSGLLVDARTPWAT PVKLFVGAGICGSLTTQSTLALMTVQSGFGGLTLTLVSLVTGVCAAVSGWLIGSAVRPSP RSSC >gi|294972313|gb|ADNU01000016.1| GENE 104 118265 - 118930 578 221 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394821|ref|ZP_06805036.1| ## NR: gi|295394821|ref|ZP_06805036.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 221 1 221 221 417 100.0 1e-115 MNSWAATLILAVAVLALILFLIPPLHSVAWIIGLISAVITALGVVGLAYEWSSTQARIDR LGNELTQAYEQSNRVQLTQVEDEPQNPDAEYAARIRSLFPQDTGLVQELRVSQVASLSQE SLRALETFLSQSKHASFINRDAHYAFMDLFRTGSALRDWVKQEMAPSDQDTNELVVIPGD TREGGWHEFSRAQNHGENVANSFVTARSTFERVIFENSLDS >gi|294972313|gb|ADNU01000016.1| GENE 105 119058 - 120368 1306 436 aa, chain + ## HITS:1 COG:Cgl2788 KEGG:ns NR:ns ## COG: Cgl2788 COG1004 # Protein_GI_number: 19554038 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Corynebacterium glutamicum # 4 435 1 435 437 487 60.0 1e-137 MSTISVVGCGYLGAVHAAAMASVGHTVIGVDVDENKVRALSNFDAPFFEPGLPELLKKGQ ESGNLTFTTDIEQAKHATVHFVCVGTPQRQGEFAADMTYVEAAFESVATILKPGDVVVGK STVPVGTAARMEPTVTEHGAVLAWNPEFLREGHAVDDTLTPNRIIYGVPQGEAGEKATVA LDEVYAHNLETDTPRLIMDYATAELVKTAANSFLATKISFINAMAELCEAAGADVTVLAD AIGMDDRIGRKFLNAGLGFGGGCLPKDIRAFMARAGELGADQAVAFLREIDSINMRRRVR MVDLAREQVHGSFIGKKIAVLGAAFKPYSDDVRDSPALAVAGLISLQGGSVVVTDPQAIE NARKMFGQLTYAETAEKALQDADVVLLLTEWREYRDLDPVEVGKLVKNRAIVDGRNVLDP VQWREAGWSYRALGRP >gi|294972313|gb|ADNU01000016.1| GENE 106 120557 - 121261 523 234 aa, chain + ## HITS:1 COG:CAC3284 KEGG:ns NR:ns ## COG: CAC3284 COG1307 # Protein_GI_number: 15896529 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 226 62 276 285 77 28.0 2e-14 MPEPHAFTQALEELTSAGVDNVLILTLSGALSGTAESARTAAASSPIPAEVVDSLTLSAG LLGAVRVAAHTSGVELGAAAKEVEQWCQGNTRVAFIPESLDWLRAGGRIGAASALLGKTL SIVPVLGLADGRVVARTKVRTRSKAVAKLADFVKDSCELLGGHGPVDIVVVHSEQDIDNA NVAARDLVDAVAEVVDSLGAKVQARVETRVASTVVTGHVGPGTVGVFVQSRPGG >gi|294972313|gb|ADNU01000016.1| GENE 107 121364 - 122101 515 245 aa, chain + ## HITS:1 COG:SP0954 KEGG:ns NR:ns ## COG: SP0954 COG1555 # Protein_GI_number: 15900831 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Streptococcus pneumoniae TIGR4 # 101 245 74 215 216 116 46.0 4e-26 MSASPDDRFAGLVGASHQGWKPEDDLDDLVPGNRPVPARVIIVAVAVVVVLAVVGLIIFT ALKQSPDSGGETAGAVEPGPPVASEVGSEVGSPANSPASEVTVHVAGEVKNPGVMTLPAG SRVTDAVQAAGGMTHDADPSALNLAQPLNDGEQIKVPKVGEPEVSGGVSGSSDGASSGAS GAGKINVNTASEKELQELPGVGPATSEAIIKHREENGRFESIEELEDVPGIGPAILERLT PLVTV >gi|294972313|gb|ADNU01000016.1| GENE 108 122103 - 124298 970 731 aa, chain + ## HITS:1 COG:MT2487 KEGG:ns NR:ns ## COG: MT2487 COG0658 # Protein_GI_number: 15841932 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 190 446 218 473 517 95 37.0 4e-19 MRVILKYPATVRLVVAATAAWTCAVFAPPLWVAGLCAMGASVAAIGCTVYAQRGESSSAP FRTTLRALTFVLLFACGASGIVVASVHARNPPGDIRGEFTVITDPTQLEAGVHVAQVAGR TGVLSAFSRKELPAAGTRIYLDTNGTRDGPQTKAFIDTWHVTGTPNAAWRVRASLRAHLR DTSGHSHAGARLLPGLVVGDTSGLDATSETNMKAMSLTHITAVSGSNISLVALTVLSLMR LATNRRLITVGAAVAVTAGYVFVVGPDPSVIRAAGMGLLGAIVLVRGTGRAGISIIASTV VVLLVARPELAVSAGFILSVAGTTALMVMGDPVTRLGTRLGLPRFLAQALAIPLTAQIGV FPVAVALGNPPSAWAVLANAVCAPVIAPATLAGMLVLCTQMIPFVSGAIAWFGAVCSWWI PAVAQFAVTLPGAHSAWPTGPTGIVLATCVSLLSAVAVILRSRVCAGLAALALLLGSCVP LIVAPRYTHWVAAVCDVGQGSATVIKTGPSAALVIDTGAFEDKIDACLRSLNVTHVDLAL SHLDKDHVGAIEGASRGRTLGTVYVSPADAGGAELRALRLPGTPTTVEQGQVFQHGQTTW SVLWPRPTRKPGSNATSLVIRVEVATTSGTVSLLIPGDVGKDEQRVLARNIEPADILLAP HHGSRDLDEKFFRAVKPRVGAVSVGPNTYGHPTGHALRAFGPIPVLRTDQCGTLVLDKEG NFTGSECQARL >gi|294972313|gb|ADNU01000016.1| GENE 109 124344 - 125321 694 325 aa, chain + ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 34 324 41 331 331 162 35.0 7e-40 MAKKNLVSWLKAKPTPLAVVSGSEAVLVRKTLERISAKVDSDVERVRLDASHYEPGSLLQ ACMASLFSAQKYVVVDSLESMSDDFLADALSYVGDANPDAVVVFLHGGGNRGAKLLKALA AQGAPTYDATPLKTDAQKSDFATGEFKRAGRSIEPDAFASLMSALSADVSELAAGIEQLL SDTQGTIDRATVEKYYAGRIEASGFKVADAAIAGKRAEALSLLRHALETGTDPVPLVATI AMKLRQLAKVGGMRGSAGQLAGELKMAPWQIDKARRELRYWSPEALGDAIMLTAWADHAV KGGGRDPEYAVERLILGVAEYANQK >gi|294972313|gb|ADNU01000016.1| GENE 110 125417 - 125848 420 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394827|ref|ZP_06805042.1| ## NR: gi|295394827|ref|ZP_06805042.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 143 1 143 143 240 100.0 3e-62 MAHVNPENVSPEQAIEALNVVDGARKSFDSANNLPLAGLLISTGATATTIPLLVAVSEEF PVVGFVFAMALMVPGFTVYTLARSWSKTDSPIFFSVLGGQLLGFMAGVIGWGAGAPPVVL YVGAAVSLVATTVGMLMLMNRGK >gi|294972313|gb|ADNU01000016.1| GENE 111 125848 - 126162 306 104 aa, chain + ## HITS:1 COG:Cgl0176 KEGG:ns NR:ns ## COG: Cgl0176 COG1846 # Protein_GI_number: 19551426 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 9 97 10 98 102 68 37.0 3e-12 MTAHALEQLSPLLSNPTRLALVAGLDGCVKSDFQTIKQQLSVTDSTLSKHIAALEKEGLV DVKKGFVGKKTKTTLSLSRKGREVFEAHMQGLKEIARMSFAEEE >gi|294972313|gb|ADNU01000016.1| GENE 112 126250 - 126510 302 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62426402|ref|ZP_00381530.1| COG0268: Ribosomal protein S20 [Brevibacterium linens BL2] # 1 86 1 86 86 120 73 3e-26 MANIKSQIKRNRTNEKARLRNVAVRSEVKSAIRKVREQIEAGNAEEAQAAFAVATRKLDK AVSKGVLHKRNAANRKSKLAQKVNAL >gi|294972313|gb|ADNU01000016.1| GENE 113 126672 - 127343 570 223 aa, chain - ## HITS:1 COG:no KEGG:Sked_13320 NR:ns ## KEGG: Sked_13320 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 54 219 26 188 193 160 51.0 5e-38 MDFKSFARRHVQSSIRTGIRFAARQLSDPKNADLLTDLLGQKSEPPKQDQPQANERKPEP TSGRKSGNYTASRKAQRNRPKQRFPKKPDGGYPGDYTGPIKPLYSPDLDGDADPGEIVWG WVPYEEDPTQGKDRPVLIIGRDNKWLLGLMLTSKDNVPGGVGEVRESEHGSRYINVGTGD WDKQKRPSEIRLDRVIRIDARDVRREGAIMPMSMFSRVVDAVQ >gi|294972313|gb|ADNU01000016.1| GENE 114 127459 - 129315 2025 618 aa, chain + ## HITS:1 COG:MT2476 KEGG:ns NR:ns ## COG: MT2476 COG0481 # Protein_GI_number: 15841921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Mycobacterium tuberculosis CDC1551 # 15 617 47 652 653 932 75.0 0 MPKVSDSRSIQVASTAPEQLRNFCIIAHIDHGKSTLADRMLQLTGAVQPRDMRAQYLDRM DIERERGITIKSQAVRMQWEFDGTPYALNMIDTPGHVDFTYEVSRSLAACEGALLLVDSA QGIEAQTLANLYLAIENDLTIIPVLNKIDLPAANPDKYAQELANLIGCEPEDCLRVSGKT GEGVEAVLDRIVRDIPAPVGEKDAPARAMIFDSVYDTYRGVVTYVRVVDGKLEPREKVEM ISTHATHEVLEIGVSSPEPVASEGLGVGEVGYIITGVKDVRQSKVGDTVTSARNPAQEPL AGYRDPKPMVFSGLFPIDGSDYPNLREALDKLKLNDAALTYEPETSAALGFGFRCGFLGL LHLEIVRERLEREFDLDLISTAPSVVYSVTMEDGSEHTVTNPSEYPEGKIKEVREPMVRA TVLTPSEFVGAVMELCQNKRGQMQGMDYLSEDRVEIRYRMPLAEIVFDFFDSLKSRTKGY ASLDYDNDGDQAAALVKVDILLHGDKVDAFSAIVHKDKAYNYGVLMASKLKDLIPRQQFE VPIQAAVGSRIIARETIRAIRKDVLSKCYGGDISRKRKLLEKQKEGKKRMKMVGSVEVPQ EAFIAALSSDDSKSEKKN >gi|294972313|gb|ADNU01000016.1| GENE 115 129316 - 130524 974 402 aa, chain + ## HITS:1 COG:MT2457 KEGG:ns NR:ns ## COG: MT2457 COG0635 # Protein_GI_number: 15841901 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 16 397 10 389 390 298 44.0 9e-81 MPAQPEGDVPPLDGSLPASALDSSRTLAAYVHVPYCRVRCGYCDFNTYTASELGKGANRE DYPDQIASEIDLALRVLGEPRALNTVFFGGGTPTLLPASVLGGVLSQLKSVFGVVTGAEV TTEANPDTLSLEYLSELARSGFTRVSVGMQSAVDHVLHTLDRTHDPARIPEVVQWVKDAG LQVSLDLIYGTPGESLDDWKRSVEVALACEPDHISAYSLIVEPGTKMGAQVRRGELPMPD EDDLADKYEWADSAFTTAGLNWYEVSNWSRSVDTRCEHNMSYWTGDDWWGFGPGAHSHIG GVRFWNAKHPRAWADRLANGQSPAVGREALDAPTREVERILLLARVREGLALDSLPSAAQ SLIERFVRMGYLHEDRTCFSPTLSGRLMVDYMVRELVDTLDT >gi|294972313|gb|ADNU01000016.1| GENE 116 130576 - 131244 592 222 aa, chain - ## HITS:1 COG:PA5333 KEGG:ns NR:ns ## COG: PA5333 COG3296 # Protein_GI_number: 15600526 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 136 222 37 123 123 72 37.0 8e-13 MTNPHGSDGPPSFGSNPTGGFGSGPASNNSNAEAPKAPEAPKAPEPPQSADAPEAPKPSQ GSAYGTANPNEPQYGNTGQGHSYGSNGQGQPYPQTQPADSELPDSAYGPGSESYWNSSND DRTMGLLVHILGILTNVVGPAILYVIKKDESPFVRHHAAQSLNFQITILLAHFVAGILTL TGIGAFLTPVIFIGSLVYEILALLKAKDGQGYKIPVAIPIFK >gi|294972313|gb|ADNU01000016.1| GENE 117 131349 - 132194 618 281 aa, chain - ## HITS:1 COG:no KEGG:Sked_13390 NR:ns ## KEGG: Sked_13390 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 3 278 6 284 286 306 60.0 5e-82 MNYGSDVLSGGPRSHRRPTSRKVPAKRGLVVEEVSTGFVGTILGVEKAPGGFAVRLEDRN GHVQSFPLGPGFWIDGKPVELTRPTATTPTRPQRTASGSVAVPGARARVARGSRIWVEGK HDAQLVEKIWGDDLRIEGVVVEELGGLDDLEEKLAQFQPDTSHRVGVLADHIVSGSKETR IAQRVQERFGPVVHVIGHSFIDIWQAVKPQCVGIPEWPTVPRGEDWKTGVCRRLGWPHEQ PGDTGRAWAHILSRVNTIADLDHSLSGRVEELIDFVTVDPS >gi|294972313|gb|ADNU01000016.1| GENE 118 132286 - 133287 791 333 aa, chain + ## HITS:1 COG:ML0624 KEGG:ns NR:ns ## COG: ML0624 COG1420 # Protein_GI_number: 15827254 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Mycobacterium leprae # 3 331 5 340 343 291 52.0 1e-78 MNDDRRSRVLRAIVEDYVETKEPVGSKALVERHSLGVSPATIRNDMAALEAQGLIAQPHT SAGRIPTDKGYRKFVDTIDEIKPLSAAERRAITRILSHPVDIEDMLERTVRLLADLTSQV AVIQYPVRSREKFRHLELVDLGGNRLLVVFITDSGQVDQRIVEMRTTIDDFELGTLRTLF NSVLDGRALDDVAPALSVLDVPVALAAPAAAVADVVAELASGRRQERLVMAGTANLARSS GGIYEHVAPLLEAFEEQVVLLKLLAHMSADGVSVSIGHENPESLATTSVIASNYGSEDSR ASLAVLGPTRMDYPTTIAAVRAVSRYITVILDK >gi|294972313|gb|ADNU01000016.1| GENE 119 133319 - 134018 574 233 aa, chain + ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 3 233 4 240 378 216 51.0 4e-56 MSDHYETLGVSRDASAEEIKKAYRKLARKYHPDVNPGHDDEFKAVSVAYDVLSDPQKRRN YDAGGGEYGQPGASGFGGFSDIFDAFFGGGGGAHPGPASRKRPGRDALVGVSIDLKTAVF GGTEDISIVTAKLCDTCHGDGTRPGTSPQTCSLCKGAGSVQRMTRTLMGQMVTNQPCNNC GGYGTIIADPCQSCNGDGRVRAEETLSVKIPAGVKDGTRILLSGRGEVGPGGG Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:58:51 2011 Seq name: gi|294972311|gb|ADNU01000017.1| Brevibacterium mcbrellneri ATCC 49030 contig00019, whole genome shotgun sequence Length of sequence - 1067 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 18 - 1061 1225 ## COG4166 ABC-type oligopeptide transport system, periplasmic component Predicted protein(s) >gi|294972311|gb|ADNU01000017.1| GENE 1 18 - 1061 1225 347 aa, chain + ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 2 336 186 524 534 196 35.0 4e-50 MPLPESFFKDHEAYGKKPIGNGPFKLTEYKQEQQIVLEKNADYQGEAKAHVDKLTFKMYT EPGAAYADVVAGNVDYVDAIPPDAVAGKKWQTDLGEGRWQLSPSTLWNGYSFPQYDEKFK DPKVRQAISMAIDRQAVTDAVTNGENTPGTAWSPPGIEPFQDDICGDKCHVDAEAAKKLL EEGGGFKGTLTIAFNNDGPGNKEVTEAVCTSINENLGIDCQPQSFPTFAEMLDKIDAKEM TGMYRSGWQADFPSPLSYLTAYYITNAGSNKSDYSNPEYDKMASEILSQDEAEQEATFKK MQETLAEDMPVTPLWYGTLRLGWSDKVVAPQVTWKSTIDFTTVGLKK Prediction of potential genes in microbial genomes Time: Wed Jun 29 01:59:38 2011 Seq name: gi|294972172|gb|ADNU01000018.1| Brevibacterium mcbrellneri ATCC 49030 contig00020, whole genome shotgun sequence Length of sequence - 139412 bp Number of predicted genes - 141, with homology - 138 Number of transcription units - 60, operones - 29 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 131 - 424 112 ## gi|295396753|ref|ZP_06806892.1| transposase + Term 431 - 465 2.0 - TRNA 343 - 415 86.2 # Ala TGC 0 0 - TRNA 579 - 652 84.8 # Ile GAT 0 0 - Term 757 - 805 14.1 2 2 Op 1 . - CDS 863 - 2080 861 ## Krad_0008 hypothetical protein 3 2 Op 2 24/0.000 - CDS 2134 - 4782 2781 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 4 2 Op 3 5/0.059 - CDS 4843 - 6837 2008 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Prom 6892 - 6951 2.2 - Term 6896 - 6957 7.5 5 3 Op 1 5/0.059 - CDS 7044 - 7565 145 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 6 3 Op 2 18/0.000 - CDS 7565 - 8683 682 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 7 3 Op 3 16/0.000 - CDS 8696 - 9835 826 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 9866 - 9925 4.4 8 3 Op 4 . - CDS 10300 - 11730 1035 ## COG0593 ATPase involved in DNA replication initiation - Prom 11782 - 11841 1.7 + Prom 11915 - 11974 2.1 9 4 Op 1 . + CDS 12183 - 12320 199 ## PROTEIN SUPPORTED gi|227427032|ref|ZP_03910095.1| LSU ribosomal protein L34P 10 4 Op 2 16/0.000 + CDS 12321 - 12665 200 ## COG0594 RNase P protein component 11 4 Op 3 18/0.000 + CDS 12755 - 13054 163 ## COG0759 Uncharacterized conserved protein 12 4 Op 4 16/0.000 + CDS 13066 - 14025 1075 ## COG0706 Preprotein translocase subunit YidC 13 4 Op 5 3/0.118 + CDS 14032 - 14535 774 ## COG1847 Predicted RNA-binding protein 14 4 Op 6 15/0.000 + CDS 14538 - 15167 491 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 15223 - 15260 4.1 15 4 Op 7 25/0.000 + CDS 15319 - 16215 525 ## COG1192 ATPases involved in chromosome partitioning 16 4 Op 8 . + CDS 16208 - 17335 424 ## COG1475 Predicted transcriptional regulators + Term 17349 - 17388 9.8 - Term 17339 - 17374 3.4 17 5 Tu 1 2/0.176 - CDS 17390 - 18526 510 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Term 18533 - 18574 10.3 18 6 Op 1 11/0.059 - CDS 18594 - 18914 370 ## COG0526 Thiol-disulfide isomerase and thioredoxins 19 6 Op 2 . - CDS 18929 - 19867 734 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 20 6 Op 3 . - CDS 19938 - 22196 1732 ## Celf_3797 hypothetical protein 21 6 Op 4 . - CDS 22291 - 23913 1496 ## COG0728 Uncharacterized membrane protein, putative virulence factor 22 6 Op 5 . - CDS 23972 - 26095 1442 ## Sked_37910 hypothetical protein 23 6 Op 6 . - CDS 26092 - 26583 472 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 26579 - 26638 2.3 24 7 Op 1 . + CDS 26661 - 28208 1171 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 25 7 Op 2 . + CDS 28251 - 29963 1534 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Term 30039 - 30084 12.9 26 8 Op 1 . + CDS 30198 - 32504 2014 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 27 8 Op 2 . + CDS 32588 - 33901 1026 ## gi|295394865|ref|ZP_06805078.1| brp/Blh family beta-carotene 15,15'-monooxygenase + Term 33908 - 33961 1.8 28 9 Op 1 24/0.000 + CDS 34009 - 34299 389 ## PROTEIN SUPPORTED gi|62425122|ref|ZP_00380259.1| COG0360: Ribosomal protein S6 29 9 Op 2 21/0.000 + CDS 34388 - 35023 533 ## COG0629 Single-stranded DNA-binding protein 30 9 Op 3 27/0.000 + CDS 35047 - 35286 349 ## PROTEIN SUPPORTED gi|62425124|ref|ZP_00380261.1| COG0238: Ribosomal protein S18 31 9 Op 4 . + CDS 35304 - 35762 601 ## PROTEIN SUPPORTED gi|62425125|ref|ZP_00380262.1| COG0359: Ribosomal protein L9 + Term 35793 - 35840 18.7 - Term 35779 - 35830 21.1 32 10 Tu 1 . - CDS 35893 - 36813 605 ## Mvan_5526 hypothetical protein - Prom 36913 - 36972 2.2 + Prom 36921 - 36980 1.5 33 11 Tu 1 . + CDS 37081 - 38376 1029 ## COG2733 Predicted membrane protein 34 12 Tu 1 . + CDS 38486 - 39292 284 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 35 13 Op 1 . + CDS 39529 - 40797 1098 ## RMDY18_02290 flagellar hook-associated protein 36 13 Op 2 . + CDS 40849 - 42225 1083 ## COG0305 Replicative DNA helicase 37 13 Op 3 . + CDS 42289 - 42477 234 ## gi|295394875|ref|ZP_06805088.1| AraC family transcriptional regulator 38 13 Op 4 . + CDS 42456 - 42779 275 ## gi|295394876|ref|ZP_06805089.1| conserved hypothetical protein 39 14 Tu 1 . - CDS 42830 - 43369 488 ## COG5395 Predicted membrane protein - Prom 43518 - 43577 2.7 40 15 Tu 1 . + CDS 43453 - 44061 433 ## Achl_2613 MerR family transcriptional regulator 41 16 Tu 1 . - CDS 44083 - 44688 564 ## COG0572 Uridine kinase - Prom 44720 - 44779 2.0 + Prom 44692 - 44751 2.0 42 17 Op 1 . + CDS 44854 - 45681 719 ## COG2860 Predicted membrane protein 43 17 Op 2 . + CDS 45691 - 46764 905 ## COG2334 Putative homoserine kinase type II (protein kinase fold) 44 17 Op 3 . + CDS 46797 - 47207 457 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 45 18 Op 1 . - CDS 47266 - 47688 452 ## gi|295394883|ref|ZP_06805096.1| conserved hypothetical protein 46 18 Op 2 1/0.353 - CDS 47685 - 48734 975 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 47 18 Op 3 . - CDS 48771 - 49343 400 ## COG0640 Predicted transcriptional regulators 48 18 Op 4 . - CDS 49369 - 50013 572 ## gi|295394886|ref|ZP_06805099.1| conserved hypothetical protein 49 19 Tu 1 . + CDS 50126 - 50698 641 ## gi|295394887|ref|ZP_06805100.1| conserved protein 50 20 Op 1 40/0.000 - CDS 50718 - 51965 1272 ## COG0642 Signal transduction histidine kinase 51 20 Op 2 . - CDS 51969 - 52769 818 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 52 20 Op 3 . - CDS 52838 - 53470 427 ## gi|295394890|ref|ZP_06805103.1| possible preprotein translocase subunit SecA 53 21 Op 1 . + CDS 53517 - 53774 213 ## gi|295394891|ref|ZP_06805104.1| conserved hypothetical protein 54 21 Op 2 . + CDS 53842 - 54048 210 ## gi|295394892|ref|ZP_06805105.1| probable copper binding protein 55 21 Op 3 . + CDS 54049 - 56202 2148 ## COG2217 Cation transport ATPase 56 21 Op 4 . + CDS 56232 - 57953 1220 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism + Term 57965 - 58015 1.1 57 22 Tu 1 . - CDS 58009 - 58716 339 ## cpfrc_00042 hypothetical protein + Prom 58677 - 58736 2.2 58 23 Tu 1 . + CDS 58899 - 59621 231 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 + Term 59770 - 59807 -0.5 - Term 59610 - 59644 -0.7 59 24 Tu 1 . - CDS 59713 - 61131 1295 ## COG0015 Adenylosuccinate lyase 60 25 Op 1 . + CDS 61377 - 61631 143 ## gi|295394898|ref|ZP_06805111.1| conserved hypothetical protein 61 25 Op 2 . + CDS 61628 - 62188 304 ## gi|295394899|ref|ZP_06805112.1| hypothetical protein HMPREF0183_0610 62 25 Op 3 . + CDS 62188 - 63630 791 ## Celf_3243 hypothetical protein + Term 63690 - 63731 1.3 63 26 Op 1 28/0.000 + CDS 63771 - 64907 1138 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 64 26 Op 2 24/0.000 + CDS 64910 - 65884 1119 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 65 26 Op 3 . + CDS 65894 - 67264 1254 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - Term 67298 - 67345 5.6 66 27 Tu 1 . - CDS 67360 - 68181 628 ## Gbro_1246 pyrrolo-quinoline quinone beta-propeller repeat-containing protein 67 28 Op 1 . + CDS 68334 - 68558 113 ## 68 28 Op 2 16/0.000 + CDS 68576 - 68812 335 ## PROTEIN SUPPORTED gi|50955925|ref|YP_063213.1| 50S ribosomal protein L28 69 28 Op 3 3/0.118 + CDS 68812 - 68979 270 ## PROTEIN SUPPORTED gi|88854441|ref|ZP_01129108.1| 50S ribosomal protein L33 70 28 Op 4 . + CDS 68983 - 69288 466 ## PROTEIN SUPPORTED gi|62425525|ref|ZP_00380658.1| COG0199: Ribosomal protein S14 71 28 Op 5 . + CDS 69349 - 69633 434 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 69659 - 69707 14.1 72 29 Op 1 . + CDS 69758 - 70624 1005 ## COG0388 Predicted amidohydrolase 73 29 Op 2 . + CDS 70659 - 72779 1680 ## COG3336 Predicted membrane protein + Term 72832 - 72873 2.1 + Prom 72810 - 72869 3.1 74 30 Tu 1 . + CDS 72917 - 73837 848 ## COG0477 Permeases of the major facilitator superfamily + Term 73883 - 73928 3.1 - Term 73586 - 73620 -0.9 75 31 Tu 1 . - CDS 73826 - 74827 612 ## COG2801 Transposase and inactivated derivatives 76 32 Op 1 . - CDS 74897 - 75442 372 ## Psed_6718 cytochrome c biogenesis protein transmembrane region 77 32 Op 2 . - CDS 75385 - 75816 220 ## Psed_6718 cytochrome c biogenesis protein transmembrane region 78 32 Op 3 . - CDS 75820 - 76344 486 ## Psed_6719 Redoxin domain-containing protein 79 32 Op 4 . - CDS 76341 - 76640 215 ## gi|295394916|ref|ZP_06805129.1| conserved hypothetical protein 80 32 Op 5 . - CDS 76670 - 77044 292 ## Ksed_25630 alkylmercury lyase 81 32 Op 6 . - CDS 77026 - 77331 342 ## Mflv_3214 alkylmercury lyase (EC:4.99.1.2) 82 32 Op 7 . - CDS 77377 - 78801 468 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Prom 78798 - 78857 2.1 83 33 Tu 1 . + CDS 78907 - 79296 369 ## COG0789 Predicted transcriptional regulators + Term 79312 - 79354 4.1 84 34 Tu 1 . + CDS 79627 - 80808 792 ## COG2814 Arabinose efflux permease - Term 81006 - 81046 -1.0 85 35 Tu 1 . - CDS 81047 - 81376 89 ## + Prom 81084 - 81143 2.1 86 36 Tu 1 . + CDS 81290 - 82408 733 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Term 82226 - 82267 -0.5 87 37 Op 1 1/0.353 - CDS 82440 - 82928 264 ## COG5500 Predicted integral membrane protein 88 37 Op 2 . - CDS 82934 - 83803 524 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 89 38 Tu 1 . + CDS 83949 - 84905 567 ## COG2207 AraC-type DNA-binding domain-containing proteins 90 39 Op 1 . - CDS 84921 - 85502 384 ## COG0558 Phosphatidylglycerophosphate synthase 91 39 Op 2 . - CDS 85499 - 86089 456 ## COG0586 Uncharacterized membrane-associated protein 92 40 Op 1 19/0.000 + CDS 86216 - 87637 864 ## COG4585 Signal transduction histidine kinase 93 40 Op 2 . + CDS 87634 - 88311 562 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 88537 - 88569 -1.0 94 41 Tu 1 . + CDS 88610 - 88867 73 ## + Term 89035 - 89067 -1.0 95 42 Tu 1 . - CDS 89076 - 90299 771 ## COG0477 Permeases of the major facilitator superfamily 96 43 Tu 1 . + CDS 90338 - 90907 243 ## COG1309 Transcriptional regulator 97 44 Tu 1 . - CDS 91228 - 91494 200 ## gi|295394933|ref|ZP_06805146.1| conserved hypothetical protein 98 45 Tu 1 . + CDS 91571 - 94099 1354 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 99 46 Tu 1 . + CDS 94156 - 94572 255 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 94628 - 94663 -0.7 100 47 Op 1 . - CDS 94561 - 95469 429 ## COG2801 Transposase and inactivated derivatives 101 47 Op 2 . - CDS 95559 - 96734 814 ## COG2814 Arabinose efflux permease 102 48 Tu 1 . + CDS 96916 - 97425 415 ## COG0477 Permeases of the major facilitator superfamily 103 49 Op 1 1/0.353 + CDS 97592 - 98476 659 ## COG0583 Transcriptional regulator 104 49 Op 2 . + CDS 98547 - 99455 1001 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 105 50 Op 1 . - CDS 99471 - 100187 485 ## COG0325 Predicted enzyme with a TIM-barrel fold 106 50 Op 2 . - CDS 100184 - 101461 1313 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 107 50 Op 3 . - CDS 101458 - 102303 683 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 108 50 Op 4 . - CDS 102376 - 102669 152 ## KRH_05890 putative molybdopterin synthase small subunit MoaD 109 50 Op 5 . - CDS 102671 - 103813 696 ## COG2896 Molybdenum cofactor biosynthesis enzyme 110 51 Op 1 2/0.176 + CDS 103853 - 104848 749 ## COG0521 Molybdopterin biosynthesis enzymes 111 51 Op 2 . + CDS 104845 - 106050 780 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 112 52 Op 1 2/0.176 - CDS 106047 - 106706 236 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 113 52 Op 2 23/0.000 - CDS 106703 - 107464 547 ## COG4149 ABC-type molybdate transport system, permease component 114 52 Op 3 . - CDS 107515 - 108258 562 ## COG0725 ABC-type molybdate transport system, periplasmic component 115 52 Op 4 . - CDS 108304 - 108690 440 ## Asphe3_36020 molybdenum-pterin binding domain protein 116 52 Op 5 5/0.059 - CDS 108698 - 109246 489 ## COG0315 Molybdenum cofactor biosynthesis enzyme 117 52 Op 6 . - CDS 109291 - 110688 689 ## COG0303 Molybdopterin biosynthesis enzyme 118 53 Tu 1 . + CDS 110738 - 112654 1814 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 112754 - 112790 2.1 119 54 Tu 1 . - CDS 112659 - 113612 927 ## RSal33209_2230 hypothetical protein - Prom 113644 - 113703 3.6 120 55 Tu 1 . + CDS 113698 - 114717 929 ## COG1073 Hydrolases of the alpha/beta superfamily - Term 114483 - 114517 -0.9 121 56 Op 1 . - CDS 114730 - 115764 651 ## gi|295394957|ref|ZP_06805170.1| ABC proline/glycine betaine transport system, ABC protein 122 56 Op 2 . - CDS 115772 - 117268 1266 ## YE2684 hypothetical protein - Prom 117371 - 117430 2.1 123 57 Op 1 . + CDS 117443 - 118033 584 ## COG0717 Deoxycytidine deaminase 124 57 Op 2 . + CDS 118030 - 118896 670 ## Xcel_3188 hypothetical protein 125 58 Op 1 6/0.059 + CDS 119009 - 122029 2356 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 126 58 Op 2 21/0.000 + CDS 122026 - 122526 484 ## COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit 127 58 Op 3 . + CDS 122523 - 124100 1163 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 128 58 Op 4 . + CDS 124100 - 124699 271 ## CMM_1090 putative monovalent cation/H+ antiporter subunit E 129 58 Op 5 . + CDS 124696 - 125097 538 ## CMM_1091 putative multisubunit Na+/H+ antiporter, NADH-quinone dehydrogenase 130 58 Op 6 . + CDS 125094 - 125495 278 ## Asphe3_37180 multisubunit sodium/proton antiporter, MrpG subunit 131 58 Op 7 40/0.000 + CDS 125498 - 126229 639 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 132 58 Op 8 . + CDS 126238 - 127653 952 ## COG0642 Signal transduction histidine kinase 133 58 Op 9 . + CDS 127650 - 128327 591 ## gi|295394969|ref|ZP_06805182.1| conserved hypothetical protein 134 58 Op 10 . + CDS 128340 - 128729 439 ## gi|295394970|ref|ZP_06805183.1| conserved hypothetical protein 135 58 Op 11 . + CDS 128810 - 129376 428 ## gi|295394971|ref|ZP_06805184.1| conserved hypothetical protein + Term 129393 - 129422 -0.3 136 58 Op 12 . + CDS 129462 - 130094 637 ## COG2847 Uncharacterized protein conserved in bacteria 137 58 Op 13 . + CDS 130087 - 131355 994 ## COG2837 Predicted iron-dependent peroxidase 138 58 Op 14 . + CDS 131413 - 132270 497 ## COG0710 3-dehydroquinate dehydratase + Term 132315 - 132351 -0.1 139 59 Op 1 . - CDS 132282 - 132578 435 ## gi|295394975|ref|ZP_06805188.1| conserved hypothetical protein 140 59 Op 2 . - CDS 132630 - 133529 807 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 133668 - 133727 2.4 + Prom 133632 - 133691 4.3 141 60 Tu 1 . + CDS 133768 - 139260 5247 ## REQ_27490 membrane protein + Term 139318 - 139365 13.3 Predicted protein(s) >gi|294972172|gb|ADNU01000018.1| GENE 1 131 - 424 112 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396753|ref|ZP_06806892.1| ## NR: gi|295396753|ref|ZP_06806892.1| transposase [Brevibacterium mcbrellneri ATCC 49030] transposase [Brevibacterium mcbrellneri ATCC 49030] # 1 46 16 61 300 95 97.0 8e-19 MLDGTYFNGWCVLIAHTGTHVIDWQWCDREKLASWTTLLARIPPPDATQKPWWVFPPGLL FYECCLTSFSSGGKGTRTPNPLLAKQMRYQLRHTPKR >gi|294972172|gb|ADNU01000018.1| GENE 2 863 - 2080 861 405 aa, chain - ## HITS:1 COG:no KEGG:Krad_0008 NR:ns ## KEGG: Krad_0008 # Name: not_defined # Def: hypothetical protein # Organism: K.radiotolerans # Pathway: not_defined # 287 405 53 171 171 114 49.0 8e-24 MTAGSSDTGQSQSGATENKQASGAGGGQPAKPQQPAQSQQAGQNAQPKTSTQAQTPAKAG SAGQAGKPSGQREQPVKAQPAKPAQAPAAGTDSASASGSGKSGAGDSSARGNAGTAGNSR ATGAKATDASKANSSGVRSTSQGVRLGGSKSDAGQTQVVATSGGAGGNAGSAGGGTGGAA AGRGSGAPTQQGSGPDTSRDRGGESHPSSQTQRGSAPTQVGGVGAVAGAGAGASAAGGVA TSAAANQSGSGPDHSNVAKTSGAKKSKDGVRASSAGVKMKGNKKSGPRSVNLTVASVDLW SVSKMTLLLSVALGIATIVAFIILWLVLQATGTLESIRGTLGEIAGPESAEEMLKLLGFG PVVSFAVILAVVNVVLMTALATLFGFLYNIGSSMVGGFRLTLVDD >gi|294972172|gb|ADNU01000018.1| GENE 3 2134 - 4782 2781 882 aa, chain - ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 22 878 11 849 856 967 58.0 0 MADETHGEDHTPEDAQGVVASRVEKVDLNLEMQRSYLDYAMSVIVGRALPDARDGLKPVH RRVLYAMYDGGYRPDRNYSKCSRVVGDVMGQYHPHGDSAIYDALVRLVQPWAMRYPLIDG QGNFGSAGNDGAAAPRYTECKMAPLSLEMVRDIEEDTVDFQDNYDGRNQEPVYLPARFPN LLVNGSAGIAVGMATNIPPHNLREVAAGAQWLLAHPDATNDEALEALLGIIKGPDFPNGA TILGRKGIEDAYRTGRGSITQRAVVEVEEIQGRTCLVVTELPYMVNPDTLANKIASYVKD GKVAGIADLRDESSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFSANMLALVDNVP RTLSIDAFLRLWVKHQIDVIVRRTRFRLKKAEERAHILRGYLKALSALDEVIALIRRSPS SDEARTGLMELLDVDEIQANAILDLQLRRLAALERLKIEEEAQKIEELIKDYNEILATPA RQREIVSEELDAVVQRYGDDRRTKILAGFDGDVSMEDLIPEEEVVVTITRGGYAKRTQSA LYRAQHRGGKGITGARLRGDDVVEQFFVTSTHNWLLFFTNTGRVYRAKAYELPEGMRDAK GQHVANLLALQPDEEIAEVLSIPDYDAAQYLMLATKSGLVKKTRLSEYDSNRTGGVIAIN LREMADGKSDELVSARLVDAEDHLLLVSRKGMSIRFAADDSTIRPTGRATSGVTGMKFKG EDTLLTMDVVTPGTYVFVVTEAGFAKRTPVEEYRLQGRGGFGIKVAKITEQRGDLVGGLI VSEGDDVFVVMEMGKVVRSKIDEVPAKGRNTMGVVFAKPGKKDRIIAVTRGPEAEDILDE VDESTVSDAELDGESVDSDQSTETQDDQSAETQSADEGDGHQ >gi|294972172|gb|ADNU01000018.1| GENE 4 4843 - 6837 2008 664 aa, chain - ## HITS:1 COG:Rv0005 KEGG:ns NR:ns ## COG: Rv0005 COG0187 # Protein_GI_number: 15607147 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis H37Rv # 9 664 51 714 714 809 61.0 0 MTADDNRHYDADDITVLEGLEAVRKRPGMYIGSTSERGLHHLVYEIVDNAVDEALAGFND RIHVTILADGGVRVEDRGRGIPVAIHSTEKVPTLQVVLTILHAGGKFGGGGYAVSGGLHG VGSSVVNALSKRMDAEVHRDGFVWRQSYERGVPTGEVTKGEAADHTGTIITFWPDEEIFD TVQFNFETLRARFQQMAFLNKGLSITLRDERAEQVNDDDVQLEEQEEEFKPREVTFKYDN GLFDYVKYLNSTKKSEPVHEDIISFEAEDTEETIALEVAMQWTSSYAESVHTYANTINTH EGGTHEEGFRIALTNLINAYAREQKLLKEKDTNLTGDDVREGLTAVISIKLGEPQFEGQT KTKLGNSEARGFVQRVVRDHLGHWLESNPMQAKEVVRKAIQASQARMAARKAREATRRKS LLESSGLPGKLKDCQSKDPSISEVFIVEGDSAGGSAVQGRDPLTQAILPLRGKILNVEKA RLDRALSNLEVQSMITAFGTGIGDEFDIEKLRYHKIVLMADADVDGQHITTLLLTLIFRY MKPLIERGHVYLATPPLYRIKWSNAADEFAYTDRERDALLTDGRANGKRLPKELGIQRYK GLGEMNYHELWETTMNPDHRLLKQVTLDDAMVADEIFSVLMGDDVDSRKRFIQENAKDVR FLDI >gi|294972172|gb|ADNU01000018.1| GENE 5 7044 - 7565 145 173 aa, chain - ## HITS:1 COG:ML0004 KEGG:ns NR:ns ## COG: ML0004 COG5512 # Protein_GI_number: 15826869 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Mycobacterium leprae # 49 173 65 189 189 112 44.0 5e-25 MGEYTLGNPTTSVAVLEALDRVRRMGDGADLATGAKRSWRSFTRAEVVYSGPGKDPRDPQ KLGISLATLTKKFGWETQLDVGELMGRWPQLVGANVAEHCVPVVCEPPKLVVRASSSTWA TQMRVMSMMLLDRLEKELGRRIIDDIEILGPTQKSWKRGRRSVKGRGPRDTYG >gi|294972172|gb|ADNU01000018.1| GENE 6 7565 - 8683 682 372 aa, chain - ## HITS:1 COG:Cgl0003 KEGG:ns NR:ns ## COG: Cgl0003 COG1195 # Protein_GI_number: 19551253 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Corynebacterium glutamicum # 1 366 1 371 394 280 42.0 4e-75 MWVSQLRLRNFRSYESFDVALEKGVSTFVAPNGWGKTNLVEALAYVSHLKSHRVSQDLPL VRSGCDEATVAVLAHRGDRQLALEVTVRAKGANSARIQRQSVRPRELVGLLPCVVFAPED LGLVKGEPAQRRDFLDDLLVTQSPRFVAVRADSDRALKQRNALLKELKNNRDPGLEATLA IWDEAFAEAASQLVVGRMDLVKRLTQPLQNDFATLAQDANEDRKSVTATYTSRIDYSDIR NTTDAKNAIIQALESRRVPEIDRGLTLVGPQRDDLELEIGGVSAKHYASHGESWSVALAL KLAGWHVLQEDNSGPDDSAVLVLDDVFAELDEGRRNRLAGMLEPAQQVLITAAVPGDVPE SLHSTIINLRDA >gi|294972172|gb|ADNU01000018.1| GENE 7 8696 - 9835 826 379 aa, chain - ## HITS:1 COG:MT0002 KEGG:ns NR:ns ## COG: MT0002 COG0592 # Protein_GI_number: 15839374 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 5 376 11 398 402 297 43.0 2e-80 MNADSTVKFKVERDVFADAVTWAAKNLPQRPVIPVLTGVLVTADSNGTVRFAFYDLEVSQ RITVEADVETPGTFLVSGRLLADIARALPPQQVVLELNNGKVDISCGSSRFSLMTMPVEE YPDLPTIPDTTGVVSASTFQHAVSQVAVAASRDDTLPVLTSVRIEIEGDKVTLLATDRYR LAVRQFTWNPRTPDFSANALLRAKTLSEVAKSMSGDLEISIAESNGKEMLSFTSDGRVVT SLLIEGDYPKVRSLFPKESTITAVLQVGALREAVRRVSLVAERNTPIKFEFTDGSLVLRA GAGDDAQASEALPATIEGGDILTGFNPHYISEGLNAIDTPYVRFSLTDPKKPVVISGMQE PDGEVDSAYRYLLMPILRF >gi|294972172|gb|ADNU01000018.1| GENE 8 10300 - 11730 1035 476 aa, chain - ## HITS:1 COG:MT0001 KEGG:ns NR:ns ## COG: MT0001 COG0593 # Protein_GI_number: 15839373 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Mycobacterium tuberculosis CDC1551 # 25 475 40 506 507 451 53.0 1e-126 MTNENENLQQIWTDVVEGMRTDSQLQPRLKGFLGLAAPKAIVEDLVVISVPNDLTRHTFE RELRQPLGQAFSEALGRPVSFAFALDSSMNTDPTPAEEPATTSAPEPQIATPAQPTVVAP TESPEVGSSDLNPKYTFDSFVIGASNRFAHAAAFAVAESPAKAYNPLFIYGDSGLGKTHL LHAVGHYALQLYPKIRVRYVSSEEFVNDFINTVGSQVTSNTLRPAFQRRYREVDILMIDD IQFLQGKDATVEEFFHTFNALHAENKQVIITSDQPPKMLKGFEERLRSRFESGLLTDVQP PDLETRFAILRNKAANENLAVPDEVLEFIASRVSSNIRELEGALIRVTAFSNLNEQVIDV GLAQTVLKDFITHDETPEITATDIMGQTAQYFNLSIEDLQGSSRSRTLTTARQIAMYLCR ELTDLSLPKIGEAFGGRDHTTVMHANRKIGTQMAERRAIYTQVTELTNRIKQQHRL >gi|294972172|gb|ADNU01000018.1| GENE 9 12183 - 12320 199 45 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227427032|ref|ZP_03910095.1| LSU ribosomal protein L34P [Xylanimonas cellulosilytica DSM 15894] # 1 45 1 45 45 81 86 2e-14 MSKRTFQPNTRKRAKTHGFRARMRTRAGRSILAARRRKGRANLSA >gi|294972172|gb|ADNU01000018.1| GENE 10 12321 - 12665 200 114 aa, chain + ## HITS:1 COG:Cgl3038 KEGG:ns NR:ns ## COG: Cgl3038 COG0594 # Protein_GI_number: 19554288 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Corynebacterium glutamicum # 1 107 1 125 133 58 35.0 3e-09 MLPVGNRVRSSEDFRRAFRSGLKAGTRNLILHVALNSESHAPRVGFVVSKGIGNAVTRNR VKRRLRAIAHERLTHMPPGIYVVRALPQSARSEFIYLERDFDVALSRVLSEDSQ >gi|294972172|gb|ADNU01000018.1| GENE 11 12755 - 13054 163 99 aa, chain + ## HITS:1 COG:aqq_01 KEGG:ns NR:ns ## COG: aqq_01 COG0759 # Protein_GI_number: 15605745 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Aquifex aeolicus # 4 65 6 67 68 70 48.0 7e-13 MPAVLFMRGYRKTVSKLYGNVCKYYPTCSKYALDAFEVRGLIVGTAMTVWRLLRCNPFSQ GGVDYVHGSVLHQRSLEMKRANNGTMVPDAFTDDASRSV >gi|294972172|gb|ADNU01000018.1| GENE 12 13066 - 14025 1075 319 aa, chain + ## HITS:1 COG:ML2710 KEGG:ns NR:ns ## COG: ML2710 COG0706 # Protein_GI_number: 15828468 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Mycobacterium leprae # 8 307 3 323 380 135 29.0 8e-32 MDWLGKLLLPIEWVVAWILAFFHMAFTALGMSPTAGWTWVAAIAGLTIVVRAVLIPLFVY QIKAQRKMQLLQPEMMELQKKYKGKRDQFSRQQMAEEQQALFKKHGTNPFASCLPLLVQM PIFFSLFRVIRNTEGIGNGDIPPIGGLTQELASQATHASIFGVELSDTFLQGDLGTKVLT AILIVIMGVTQFITQRQIMAKNMSEAAMNNPFMQQQKMLLYMMPIIFAVGGIYFPLGLIV YWLVSNVWTMVQQFIVIRNMPTPGSKAEKELIARRERQGKPLPKSMQPKKAAESEAKPKS GQRRQPMSKARQKKKNKKK >gi|294972172|gb|ADNU01000018.1| GENE 13 14032 - 14535 774 167 aa, chain + ## HITS:1 COG:MT4039 KEGG:ns NR:ns ## COG: MT4039 COG1847 # Protein_GI_number: 15843554 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 12 164 34 184 187 94 50.0 8e-20 MTDEIVEKKPTRAELLEEEGDIAADYLEELLDIADIDGDIDIDVKEGRPQVAIVCDEEDS NLSTLVGKEGRTLAALQELTRLAVQSATGQRSWMMLDIDGFRNRRRDALKDLARDYIEKV KASGEPVSLKPMNSFERKVIHDQVSKAGLVSESEGEGDRRHVVISAE >gi|294972172|gb|ADNU01000018.1| GENE 14 14538 - 15167 491 209 aa, chain + ## HITS:1 COG:MT4038 KEGG:ns NR:ns ## COG: MT4038 COG0357 # Protein_GI_number: 15843553 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Mycobacterium tuberculosis CDC1551 # 1 208 1 207 224 153 44.0 2e-37 MSQVEPVPACAEQIFGERLPHARTYAEHLATTGVEWGLIGPRELDKLWTRHILNCAVVAP LIHDDDVVGDIGSGAGLPGLVLSLAQPHASFVLIEAMERRVDWLGMVVDDLGIENVRIIR GRVEDLVDDEVFTVVTARAVKALNVLVEWSAPVLSPGGRLLALKGLKAQEEIDKAKKVLK RDKMTPPVIKLMGEEFLEIPTRVVETARR >gi|294972172|gb|ADNU01000018.1| GENE 15 15319 - 16215 525 298 aa, chain + ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 29 294 29 290 307 306 60.0 2e-83 MPILDDSTPLGAEIARNSRRAERLEAKRFPKPQSTRIFTIANQKGGVGKTTTTVNIAAAL AKHGLQVLVIDIDPQGNASTALGIEHSTDVNSVYEVLLDGMEMAEVVSDCPDIENLSAVP ATIDLAGAEIELVSVHAREFRLKRALESYLEQRKADGNPVDYVFIDCPPSLGLLTVNAFV AAEEVLIPIQCEYYALEGLSQLLNNIQLIQKHLNPQLSVSTILLTMYDGRTNLSSQVAED VRAHFPAQTLNTPIPRNVRISEAPSYGKTVITYDPNSPGALSYREAAEEIAERGAQNG >gi|294972172|gb|ADNU01000018.1| GENE 16 16208 - 17335 424 375 aa, chain + ## HITS:1 COG:Cgl3034 KEGG:ns NR:ns ## COG: Cgl3034 COG1475 # Protein_GI_number: 19554284 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 3 371 14 376 379 257 46.0 3e-68 MAERKRGLGRGIGSLIPDVINEDRPVDVFFPQSNKSVSRETSKDPAESMRQSRASKKLLP RTTHEGNATASKNNATRKKTTTAKASSTRKTTKQASNDDVSRETELVAVPGTAFGMLRLD TISPNPRQPRTVFDEDDLDELVTSIQEVGVLQPVVVRVVDTKKPAYELIMGERRLRASKL AGLKEIPAIVREVSDDDLLRDALLENLHRSDLNPLEEAAAYQQLLDDFKCTQEELSERIG RSRPQIANTLRLLRLPGLVQRRVAAGVLSQGHARALLGLNDPAQMEELAQRIVAEGLSVR ATEEAVVLLNRGDQKNVSRETRKADAELVSLAQSVGDKLDTKVNIVMGKRKGKMTVDFAN QQDLERILKVLGLNE >gi|294972172|gb|ADNU01000018.1| GENE 17 17390 - 18526 510 378 aa, chain - ## HITS:1 COG:MT4034_2 KEGG:ns NR:ns ## COG: MT4034_2 COG0860 # Protein_GI_number: 15843548 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Mycobacterium tuberculosis CDC1551 # 152 363 8 225 246 139 40.0 7e-33 MTVSSIHPGDSDPLVATVKAQLHRLGYQCDPSSDLFDHQFESVIREFQQSRGIVVDGVIG AETFKELEIARYKLGDRVLRFDPVRPLQGDDVTELQHRLSRLGVYTESITFEFGSATHNA VREIQNELGLSPDGVVGPSTLAALSAVYRQSSHGNLWALQERARVTASGESLTGRTIVIE SGTTARDFVNTTATSQSLEQERTWSSDIASRVEGRLSALGASIVHIPSDKPHLADVLNAA AVITVNQDYAPSPAPNGIATFYFGQNKDSNMVSPIGRSLGGLVHREVVARTPLLNCGVHA RTWESLRNVKAPKVQVFAGYTSNEHDRELLAQTSVRDSIAEGISVAVQRLFLHKDNDYDT GTLNVESIREMRNLYSAK >gi|294972172|gb|ADNU01000018.1| GENE 18 18594 - 18914 370 106 aa, chain - ## HITS:1 COG:alr0052 KEGG:ns NR:ns ## COG: alr0052 COG0526 # Protein_GI_number: 17227548 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Nostoc sp. PCC 7120 # 2 105 4 107 107 137 62.0 4e-33 MAQEVTDATFKEEVLSSDLPVLVDFWAPWCGPCRMVGPIVDEIAQEQADKLKVVKLNTDD NLETASAYGITSIPALYVFKGGEVAKTIIGARPKPALEQELAEFIG >gi|294972172|gb|ADNU01000018.1| GENE 19 18929 - 19867 734 312 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 7 308 5 306 306 287 49 2e-76 MTQTQLVIVGSGPAGYTAAVYAARAGLSPVVIAGSVTAGGELMNTTDVENFPGFPEGIQG PDLMENMRQQAERFGAQVVYDDVASIDFTPGAHKLTTALGSEYTAQAVILATGSAYRHLN VPGEEALSGHGVSWCATCDGFFFKDQHIAVVGGGDSALEEATFLTRFASKVTLIHRRQEF RASVAMQKRAEADPKLEFLLDSEVASIHGDTSVTGLTVRNTVTGEESELPVTGLFVAIGS DPRTDLFKDTLDLREDGYLAVDGRTSKTSVEGVFAAGDVIDPVYRQAVTAAGSGCVAALD AEHYLAELTDQS >gi|294972172|gb|ADNU01000018.1| GENE 20 19938 - 22196 1732 752 aa, chain - ## HITS:1 COG:no KEGG:Celf_3797 NR:ns ## KEGG: Celf_3797 # Name: not_defined # Def: hypothetical protein # Organism: C.fimi # Pathway: not_defined # 7 261 5 253 690 111 37.0 1e-22 MRKLPQIQRGTAIADRYVVSEILRPWLVDFPERGSILLALDAILDVPRIVYVSPTEYSGP LLERAGRSALLADPRVPAIEDAGTWNDFDYVVVQRTGGTSLARVLANGPLDTPVATAVVG ELATVLTHAASRGLHHGVLGPESVAITADGDIVVRGISLDAAVAQEPLNLGTGSMTESEL SQTDARALVAILYACLTGKWPGDEPRAGLDASGRKNNRILPVSHFVDTVPESIEEFASGV MGEQDPGPRSPSEVVRFLEPWDTRLLSTVDQSSRTEDELFSVRAHDPQTVVAPETGGEAK SDHSPGASPAQLAVALERIGLTRPGMHGAAAGVNTAHPDRYADRIQMRRASTFPIAPDKL PQVEEWSEERPQGPGDVSEEDPHQTARILNRDDAFTGSATEPGVAEGAYARDGYAYGGET EDSEDRLWDEPENNLDDSPESDATAESEDNSNDWFMGGVFQTREQAFARQQAEFERERQL ERQARERARRTQPAVTSAAGGAAATSPKVVTPTRSEKVAESEPSDSSKIQSEKPEQSDKS GKRRFGVLFGVVAIIAALVLVGVVIVRSVGSGETTTASQENHEESQGEDQSEDKQDEEEA EPPAPKEPEGPAPEINKATPLDPEGDGKEGNAKAKNLIPGEAGSWETDRYNSKEFGQLKK GVGIALELKERTTVKEVGVESEVGGGSFDILVGTDKNIDKAQKVGSGEFQKGKVTTVTID DPAEATHVFIWIKELPKVGDGYRAVIPNVTLS >gi|294972172|gb|ADNU01000018.1| GENE 21 22291 - 23913 1496 540 aa, chain - ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 3 463 76 529 640 202 32.0 2e-51 MASMSSLAKSSAVMTAGTLVSRILGLVKTVLLTAAIGLAIGGAADAFDVANKVPNNLYML LAGGILNAVLVPQIVRASKQADGGADYINRLLTLSILLLAGFTAVATLAAPILVRIYASP TWDADKIALAVAFAFISLPKIFFFGLYTMLGQVLNAKENFGPYMWAPVLNNLVSIAGLGL FIFLFGPGDLGQHAVGTWDAAKIWVIAGTGTLGVVAQALILIWPLKRIGFKYTPTFGFRG VGLGTAGKVAGWTFAAVLVGQLGFIVTSQVASTASSSGTEVTPSLAAYTAAYMTFMLPHS LVAVSLSTALFTDLSQSAADQNDEKLVDTYTQGVRVVGFVNTFFTVAFIVLAAPMSMVMA GANQTQAHAVGLIVITMIIGLIPFSGMYLTQRVFYAYEDARTPFWIQVPQIIIQSAGVIA SAFLPKQYIVAGIGASMSLGYVFALAVAVWCLRKRLPALPIASTVFAHLRFGLAGLVSGA VGFAMMWFLPDPMWAGRARAFIVCAVIGCVMLAVFMLAAWLIRVPEMRSLVTAVRTKLGR >gi|294972172|gb|ADNU01000018.1| GENE 22 23972 - 26095 1442 707 aa, chain - ## HITS:1 COG:no KEGG:Sked_37910 NR:ns ## KEGG: Sked_37910 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 71 690 100 724 751 106 22.0 4e-21 MKILTTLGSLLLALILIVTPSTGALAQPNSPTPQPTDSTEAADTSATIHIAEATPWLDEN GTFKLAGKIETTANIKNPRLSLRMTRNSLSSVDSARTWQEGTPTGTHQLATAEELPKELR AGTTTSFSFELTPTQMGLRKGNPLSTWGVRGIAVALSGDTQNDTVAKPQTTFTTWYPHPK IDPTRINMVVPITLTGYSEDGLISQDELATATDDGPLKTALDIARSYPDATLAIDPRVVE SVDRALNPPQVEQPEQTAPPQDPEELPRSITDWWDALKKEAEASTVVALPWADADLVGLQ QHDLSNYKKEALRSRSIVKSHFPNALDSWAWVGTGSASMDSLAQFANDGVTNVMLSDTQL PTSDSGTVNAVQHLWKRDSATTPLTTIPRERKPDMTTVATSANLAETFVTPGSSRATRVA ELAAKSALITNERPFDQRSLVLALPRGGTQKTWTEQVRTLASLPWVKPQTFDDTLKAEPG TRLPLQDGDVPSDISTALNDLKEPGANLNEFSSVFVHRADVRQEFNRSALTCTSIAWRTQ PSAKTCTKNFAKSAGSTMSGLNIERGSNVLLVTGEKTTIPVTIHNTTHHAARLRVRINSA SPQLKVGNSPLVEIPPGQRARVEVPVTGLANANLDTTIHIVATDGYTVRDSSPLQVQVRV DWENIGIAAIGISLSIVFVVALFFSVRRGRPKIPKSQLEAALARAEQ >gi|294972172|gb|ADNU01000018.1| GENE 23 26092 - 26583 472 163 aa, chain - ## HITS:1 COG:ML2698 KEGG:ns NR:ns ## COG: ML2698 COG0494 # Protein_GI_number: 15828458 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium leprae # 8 153 55 200 251 148 55.0 4e-36 MSRPLPRPGRYPALSRTVEETSAGGIVVNLNSPALEVAVIARINRAGRLEWCLPKGHLEG EETPAQAAMREVAEETGIVGKVLAPLGSVDYWFSAAGFRVHKVVHHFLLRAIGGELTIEN DPDHEAVAAAWVPFEELPQRLSFANERRIVIAARHTLPRFDLS >gi|294972172|gb|ADNU01000018.1| GENE 24 26661 - 28208 1171 515 aa, chain + ## HITS:1 COG:MT4026 KEGG:ns NR:ns ## COG: MT4026 COG0617 # Protein_GI_number: 15843539 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Mycobacterium tuberculosis CDC1551 # 23 504 27 476 480 510 54.0 1e-144 MFAAEAHVRLMDVLDSLDPIVGELGNRFDEAGFELALVGGSVRDALLGREIPDLDFTTDA RPDDIEKIIAPWADTYWDIGRKFGTIGMMKRGYQVEITTYRADSYDPQSRKPTVAFGDNL DDDLVRRDFTIGAMAVRLPSRAFVDPYNGLGALESRTITTPGSATTSFTDDPLRMMRAAR FVSQLGFSLAPEVRAAMSDMADRIAIVSAERVRDELTKLIVGAQPWEGIDALVDTGLADH ILPEVSGLRLERDEHHRHKDVYQHSLTVLRQAVQLEAEYAKRALSNAEGEAGDSVAEQAQ DTAKRATVDPEFTAPDFIVRFAALMHDVGKPATRKFAPGGAVTFYHHDVVGAKLTRSRMK KLNFDKETTTKVARLVELHLRFYGYGDAGWTDSAVRRYVTDAGDLLTRLHILTRSDVTTR NRRKAERLAFAYDDLESRIEALAQKEAIGAIRPDLNGQQIMEILEISPGPVVGRAYKHML DIRMERGPLSYDEARLQLLNWWESTEMGSGQQQNP >gi|294972172|gb|ADNU01000018.1| GENE 25 28251 - 29963 1534 570 aa, chain + ## HITS:1 COG:RSp1265 KEGG:ns NR:ns ## COG: RSp1265 COG0365 # Protein_GI_number: 17549484 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Ralstonia solanacearum # 6 566 5 560 562 674 59.0 0 MNPQTEQFREARDLLINLREDYDAACEQFSWPRFENFNFALDWFDQIAQGNDNPALWIVE EDGAEGKWSYQELSERSNKLANYLRSCGVKRGDHIMVMLTNQVELWETMLAGIKLGAVIM PTTTQLGPIDLSDRAERGEAQFVVANEQDCAKFDDVEHPLVRIVVGAEPTREGDFAYANY VDEPAQFDPQGQSKADDLMLLYFTSGTTSKAKMVAHTHVSYPVGHLSTMYWMGLEPGDVH LNVASPGWAKHAWSNIFTPWIAEACVFLYNYSRFDASKLMSVMERVGVTSFCAPPTVWRM LIQADLRELKTPPTKALGAGEPLNPEVIQRVQRHWNVTIRDGFGQTETTLQIGNSPGQVM KPGSMGRQLPGFNVVLRDPATGELGDEGEICLTLDPRPVGLTQGYWNNEAKTAEAFADGV YHTGDVAARDADGYITYVGRADDVFKASDYRLSPFELESVLIEHEYVVEAAVVPSPDPVR LAVPKAYVVLAPGIEPGPETAKEILRFCRAELAPYKRIRRIEFTELPKTISGKIRRVELR SREQQLHPDFGDPTVTGQEYADTDFPELKG >gi|294972172|gb|ADNU01000018.1| GENE 26 30198 - 32504 2014 768 aa, chain + ## HITS:1 COG:Cgl2930 KEGG:ns NR:ns ## COG: Cgl2930 COG0744 # Protein_GI_number: 19554180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 30 638 26 646 720 296 33.0 8e-80 MGTRTRKDETKSLLNYPRAGHTGWAKWFPSLRLVGLGILTGFVLIIGLFTVGYLSTSIPE PNAEAAGQTSTVYYDDGKTVIGTFKVEDRKSVDIQNISPSMQQAAIAAEDQSFYENRGIS VKGLSRAAVGVITDNYAGGGSTITQQYVKNYYLTNEKTLTRKLKEMFIAIKIDQEKSKDQ IMADYLNTIFLGRKSYGIEVAAHNYFDTSAKELTVEQSALLAAMIQQPSLADPSEHPEKY ESRFRYVLNNMAENGFITSEDAKNAQMPEVKKPRSDNERLGQAGYMMDAVRSELKKQGMS DDQIDRGGLKITSTFNRDMMRDAQDAIDTLPKMKKGMHAGLTSIDPATGEVKAFYGGPKY FERMQNNSTQDTAQAGSTFKPFALVAGLEAGYRLNDTFNGSAVTFPNNGNPWTPKNYGGA SYGSVTLLKATQSSINTAYAQLNINVGPDKTRDVAVRAGLPENTFGLEGNAANVLGTASP TTLQMASAFSTFAAEGMYRSPHFVREAVDPSGETLYKPDTKGERKFEQDIMAETTYALSQ VIQSGSGSYAQNLGRPAAGKTGTSSDAYSAWFVGYTPELSTAVSLFREDEEGRPQRIGSY GGRGEVTGGSFPVQVWTKYMSDALEGKPKSKFPKRPDLPDKEKPTNKSGVSKSAPKSNSS GSSSKKRSDKDDSKDNKDNKDDEKKPEDQNESDDSDKDLGDSDDSGDKGSEDKGDSSGND SGGKKPGNDKPGGEDGKNPPKQKEPKKPQPKSNSDGKSKSSKSSTTTG >gi|294972172|gb|ADNU01000018.1| GENE 27 32588 - 33901 1026 437 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394865|ref|ZP_06805078.1| ## NR: gi|295394865|ref|ZP_06805078.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] # 1 437 1 437 437 712 100.0 0 MYSPAELAGIPRGKFVGPANRRYLITNAVALLALLFLNLMAGVVKQAPCFGKGYELPSAV FRVCQSPLATALGAPGTPSTDGTTQLIASSVFTDYFVRAFGSGDSVTTAMMLAVGVNACA WIVTGCLLFRIFADAGRQWLVFVFASPMIALTLGQSFDPVGIMFVVAAWFLLLERRDGDA LNGVPGAPVLAGIAVVAAVFVQPFAVVVGAALITWLLLSGRKSDALNLAGVATILMGLLV MLDASLTERIRQAFTSGVTWGSVGSLVGSRVDHNVIVVLSLLAWIGAVALTLVLLQKAGV TRPSLPLLVSVCVGWALLTLPSSPTSLALWALPFFALVVPYVWAHLAWNLAEVALLIAVN LNVAFHLEKATGLSDAWLAFLTIVRLGLVGLMVTYVCSERGGVSQSSVSSEPSTHEQSKT ETEVAATSAVAPDSQAN >gi|294972172|gb|ADNU01000018.1| GENE 28 34009 - 34299 389 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62425122|ref|ZP_00380259.1| COG0360: Ribosomal protein S6 [Brevibacterium linens BL2] # 1 96 1 96 96 154 77 2e-36 MRKYELMLILDSELDERSVETTVEKLLHVIPAEGGTVDNVDIWGRRRFAYEIQKKSEGYY VVVDFTANPDTTKELDRQLGINEIVVRTKIVRPDAK >gi|294972172|gb|ADNU01000018.1| GENE 29 34388 - 35023 533 211 aa, chain + ## HITS:1 COG:MT0060 KEGG:ns NR:ns ## COG: MT0060 COG0629 # Protein_GI_number: 15839431 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 167 1 161 164 170 62.0 1e-42 MAGDTVITVVGNLTADPELRFTPNGAAVANFTVASTPRTFDRASGEFKDGETLFLRCSVW REFAENVAGSLSRGTRVVVQGRLKSRTFDTKEGDRRTVFELDVDEMGPSLRYATASVSRN ERSGGYGGGNQGGPGGGQGGQGGQGNWGNQGGSGWNNSGGSGGYDDQRQSGGGWNNSGSG SGNQDNDPWQSSRPQGNQGGWGNPTNEEPPF >gi|294972172|gb|ADNU01000018.1| GENE 30 35047 - 35286 349 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62425124|ref|ZP_00380261.1| COG0238: Ribosomal protein S18 [Brevibacterium linens BL2] # 1 79 1 79 79 139 89 1e-31 MAKPEIRKPIKKKANPLKPGEAASIDYKDTATLRKFISDRGKIRARRVTGVSVQEQRLIA KAVKNAREMALLPYTSSNR >gi|294972172|gb|ADNU01000018.1| GENE 31 35304 - 35762 601 152 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62425125|ref|ZP_00380262.1| COG0359: Ribosomal protein L9 [Brevibacterium linens BL2] # 1 152 1 152 152 236 76 6e-61 MPIRKVILNQEVDGLGAAGDVVDVKAGYARNLLIPRGWASPWTAGAEKQIEILRKARQVR QIADREAAVELKNKLESTVARIEMKAGKGGRLFGAVTPVLVADALKESTGHEFDRRQVAL TGHVKTSGSYVATVRVHDEITANAKFDVIGKA >gi|294972172|gb|ADNU01000018.1| GENE 32 35893 - 36813 605 306 aa, chain - ## HITS:1 COG:no KEGG:Mvan_5526 NR:ns ## KEGG: Mvan_5526 # Name: not_defined # Def: hypothetical protein # Organism: M.vanbaalenii # Pathway: not_defined # 110 289 92 262 298 81 32.0 5e-14 MEHHTSRQRELALPLKLSDARTLGLNQSDLKPVTLHGQKLHGVYTSKRHTQTVTVPQWAT QDPLWWTLFTQLRSLTTGRPHAMVTGNSAAYLRGLPVKLRPQLDIAVPQHAGIIKRPNVN TFRVSNTMSVEKAGLRIHDLGGILSIIARQEPVENLVTVLDAILGPWRRPAEMTRAELET FINSLPRGPSWSTLKQAFTLARERVASPQETRLRLALVRAGLPEPQVAPPVWIEKFRRFV HPDLAYAFAKLAIEYEGRHHFELTDQVLKDTERYYELSLLGWTVIRVTSLHSFDSVVVKV QEFLGL >gi|294972172|gb|ADNU01000018.1| GENE 33 37081 - 38376 1029 431 aa, chain + ## HITS:1 COG:Cgl0372 KEGG:ns NR:ns ## COG: Cgl0372 COG2733 # Protein_GI_number: 19551622 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 20 430 2 416 417 284 38.0 2e-76 MNQNTPPSLATPPGETPEDEQARRAALARMRAVATGLLILAALIFITVHLFTDQTGVWGF VSRASEAAMIGGLADWFAVTALFRHPLGVPIPHTAIIPRKKDVLGQSMSTFVAMNFLRAE TVAPKIRSAQVTKRVGTWLAVKRNQDIVVERAGQGINYVLARVDDSAIESLTRNVLVPKL IATHKSPVVGRLLTEIVRDGAHHRLVDLVVYEAHVWLERNPQVIEQIVGDRAPEWVPKFV NRTVASRLQTEVLGWVADVRDDRYHQARQALDRWLLELSRDLSEDTSIAQRAEVVFDDLL AQDGVVESVLDIWTSLKRLLYAAVEDSDGEVKARVRQLLAETADRMQNDTEFATMLDQKL ATTAGDLTESFGPELASVISDTIASWDAKDAADKIELYVGKDLQYIRINGTVVGALVGLL IHAVTVLVPGL >gi|294972172|gb|ADNU01000018.1| GENE 34 38486 - 39292 284 268 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 232 1 223 245 114 31 3e-24 MNTSSVITASELGKSYGNTHALRGVSLNVREGESLAIMGPSGSGKTTLLHALAGMISTDH GRVQLGTTAHTQQTDITALNESGRTRLRREVFGFVFQQGLLLPELTAVENVAMAAMLKGA QRPQAMAMAGDWLNRLGLAEHSSKLIGQLSGGQAQRVAIARAQVTDPALVFADEPTGALD SQTGAEVLHTLLSTTTGRGRTLIMVTHDENVAATCTRTVRLRDGQIVSDTAPPSTSAVSH SGPATTSAQVPPQPQHQPAPTTFCQGQP >gi|294972172|gb|ADNU01000018.1| GENE 35 39529 - 40797 1098 422 aa, chain + ## HITS:1 COG:no KEGG:RMDY18_02290 NR:ns ## KEGG: RMDY18_02290 # Name: not_defined # Def: flagellar hook-associated protein # Organism: R.mucilaginosa # Pathway: not_defined # 1 418 21 464 472 165 34.0 3e-39 MLAFAATSALLLTVAAGTFAIFAWDTSDEIVGSYRMLAAFATTLLVVPAFTLGQSAATLA TRRQDEQLSTLALLGAPRSTIVAAALTEPLVAATVGALAGVVGYFALALPVSLVQLRGEP LGYGNMILPWWMILATVVALVAVSTVAALMGLRKVVVSPLGVRTKALSSSFPWGRIVACV VLLMCVAVGMAVSRMGGGMAIVLTGFLGMVLTGLLVVDVLGVLVVRLVARIRRGSKNVHV MVASRLVSAMPKSYWRRVSGLALTSFIATFCGTGVSLMQSIKTTVGNNNLTREDSLLLTD MFTGILLTLGIAFVFITVSAVINQAADIYDRASTFQELNAAGMDNGTIRKISVASVMLPV VWISAISAGLGLFLVLPFAGAAVVLSPYSFLTIISMVLVGALVVRAGLAVTNPLIAKVIA RS >gi|294972172|gb|ADNU01000018.1| GENE 36 40849 - 42225 1083 458 aa, chain + ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 2 458 53 509 510 466 55.0 1e-131 MGSQQGNEWSGDNWQRAESGVRTPPQDLDAETSVLGSMMLSKDAIADVVENLRGEDFYKP AHETIYDVILDLYASGEPADAVTVSNALSKSGDLARIGGAAYLHTLIQSVPTSANAIFYA EIVRELALLRRLVTAGTRIVQMGYDAQGDTDDLINRAQSEIYQVTERRSSEDYVRLSEVL QPTVEEIERSGSHDGDTAGVPTGFFEFDELTNGLHPGQMIVIAARPGVGKSTLALDFARS AAIDHGQTTVIFSLEMGRLELTTRLLSAESGIPLQKLRQGKLDDERGDWTTLANTMGKIN DAPLFIDDSPNMALTEIRAKCRRLKQQHDLKMVVIDYLQLMTSGKRVESRQQEVSEFSRS LKLLAKELEVPVIALSQLNRSSEQRNDKRPMVSDLRESGSIEQDADMVLLIHREDMYDKE SPHAGEAIIMVAKHRNGPTGEITVAFQGARSRFANMPR >gi|294972172|gb|ADNU01000018.1| GENE 37 42289 - 42477 234 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394875|ref|ZP_06805088.1| ## NR: gi|295394875|ref|ZP_06805088.1| AraC family transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] AraC family transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] # 1 62 1 62 62 107 100.0 3e-22 MGSVVFESLSKEELEDELVWLKDRLGMPLDVAKAMAQAHVLEADKFRILCRIEDLQWLRS MN >gi|294972172|gb|ADNU01000018.1| GENE 38 42456 - 42779 275 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394876|ref|ZP_06805089.1| ## NR: gi|295394876|ref|ZP_06805089.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 107 1 107 107 187 100.0 2e-46 MASIDELEKVPKEFAGQLARSLSAFADSNVELRAITYEETQKCVVTNRGKGVSVKAKRGA SLTLTVRYKCSWDSESSYLKVLKSSVAVVAGPGAESDPLFRYEVVAL >gi|294972172|gb|ADNU01000018.1| GENE 39 42830 - 43369 488 179 aa, chain - ## HITS:1 COG:CC0331 KEGG:ns NR:ns ## COG: CC0331 COG5395 # Protein_GI_number: 16124586 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Caulobacter vibrioides # 23 134 68 180 186 65 40.0 4e-11 MNSIFAGLTLATVTVHPGFTHTVITIHAIAASLVVLIGPVNVLRKKKDSKHKALGRSWVV AMYATCVSGMFIYTISGGFTIFHALAILTFITTTLGVISIRRNRVTAHVGNMVGGYLGAL IAGVFAAFVPGRFIPVLAVQNPVLLWSVIMVLVVLATAWVLYVLTLFKPRITRRRGLAT >gi|294972172|gb|ADNU01000018.1| GENE 40 43453 - 44061 433 202 aa, chain + ## HITS:1 COG:no KEGG:Achl_2613 NR:ns ## KEGG: Achl_2613 # Name: not_defined # Def: MerR family transcriptional regulator # Organism: A.chlorophenolicus # Pathway: not_defined # 1 202 1 200 207 90 29.0 5e-17 MKLAELSTRSGVSIATIKYWIRAGILPAGVKRNATTADYTDRHLARLNLIHLLRDDLDTP IDEIRELTHLIDTHAPNTRIMEKSQCLALRLTHPPQNQDSSEHQRVRAISEQLGWPDVPS WAREELVVVLRRLGDKGLNVDNDYLLEHARAFAKVASHNVGYALTAREPDELAIQVIRGV RLSRDLENAISALAHTSHSLSR >gi|294972172|gb|ADNU01000018.1| GENE 41 44083 - 44688 564 201 aa, chain - ## HITS:1 COG:BH1275 KEGG:ns NR:ns ## COG: BH1275 COG0572 # Protein_GI_number: 15613838 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Bacillus halodurans # 2 197 5 201 211 204 51.0 8e-53 MPIVIGIAGGTGSGKTTLTQALAEKFAGRTTVIYQDNYYKRQDHLTFEERTRVNYDSPDA FDIDLMAEHIEDLKAMRPVQGPVYDFSIHNRTDETVDIQPESVILVEGILLLHEPRLCSL LDIKLFVDADADVRILRRIKRDVLERGRSIESVEKQYLETVKPMHELYVETSKRNADLII PDGGHNLVALDMLVHRLSREL >gi|294972172|gb|ADNU01000018.1| GENE 42 44854 - 45681 719 275 aa, chain + ## HITS:1 COG:BMEI1778 KEGG:ns NR:ns ## COG: BMEI1778 COG2860 # Protein_GI_number: 17988061 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 9 203 22 215 237 97 32.0 2e-20 MDLPSAQLVLLLADLVGVFFFALSGAVTAARKNYDITGSFMLCLLVSLGGGITRDLMLNE VPASLQQPIYLLPPAIATVLVYLIGTPALRTRRSIIFFDACGLGLFAVSGTIIALTHDLH IVSAVFLGIVTGTGGGLLRDVVANQNPALFKASDLYLTPAFIGALLTAILYSNGIWSYWI MFGTIVLVVTVRLLAIYFRWQLPSTVRGWTYPRLTEKARRLRELTRLRRAGSHARGRSTQ QHLPPSQVEGDDEAGPADPTGSENSGPADPTGPVT >gi|294972172|gb|ADNU01000018.1| GENE 43 45691 - 46764 905 357 aa, chain + ## HITS:1 COG:SMb20973_1 KEGG:ns NR:ns ## COG: SMb20973_1 COG2334 # Protein_GI_number: 16264846 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Sinorhizobium meliloti # 31 354 32 320 428 80 29.0 4e-15 MSRSLRTLTDDEIRVLVSDNFGLDVQMDQFLSGEIAINARVTAQDSAYVFKAEYPSRTMT PEYADWLSTAHQAAYESNVPVARQIPAINPFQATSGKSSGFVSVAHIDDEPVIVRLQSFL TGTEASTAELTDDYPSQVGTLAGHVATALANVSPDRDMILHPWAFESTGVNVKFASERLQ TWEASGHVPADIGPSLTRVLAFSRHIAHEFETTVKPLLDDFPQQVLHQDINDQNVLVSDG KITGLLDFGDCRVAARMAEVAIASSYVLTIRGGRSGEPPRDVISRVADAYQDATQGTDQH LTSTELDALETAAITRLCLGACTWAARVLTTRPQEPAHAYGQKRLARTWPVIEQLAQ >gi|294972172|gb|ADNU01000018.1| GENE 44 46797 - 47207 457 136 aa, chain + ## HITS:1 COG:Cgl2981 KEGG:ns NR:ns ## COG: Cgl2981 COG2146 # Protein_GI_number: 19554231 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Corynebacterium glutamicum # 42 129 24 111 116 78 42.0 4e-15 MNQHSRRQVFKATGGVAATVAVAGGLSACVNDSSNTEDAEPETVAKDKVPVGSGVVAGSY VVVQPTKGDFKAYTAVCPHQGCLVRTITEEEIVCPCHSSGFSTQDGAKLYGPANDGLKKA KVADNGDSLQVGPLEG >gi|294972172|gb|ADNU01000018.1| GENE 45 47266 - 47688 452 140 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394883|ref|ZP_06805096.1| ## NR: gi|295394883|ref|ZP_06805096.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 140 1 140 140 195 100.0 9e-49 MIQLLIPLIGVLVLLVGLGSLAWRVRPTRGERKPKARKHLTRGGLLAVGAGAVIYFVLVR IFFMFDGVLGIAWIVALLLLGFIAFRVVQLWPSKEHNAQLVASLQSDGVKVGSRQGVGTV ITAAVLLVLAVLYWFAPVLF >gi|294972172|gb|ADNU01000018.1| GENE 46 47685 - 48734 975 349 aa, chain - ## HITS:1 COG:Cgl2363 KEGG:ns NR:ns ## COG: Cgl2363 COG1680 # Protein_GI_number: 19553613 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Corynebacterium glutamicum # 67 349 69 338 342 142 35.0 8e-34 MKRTLIAGVVACVVVAVAAICVPWSFGFPHRGSGDQHVLDTTGPYLSHGYRREAAVAIIP PSGEPSFAGWGADENTVFEIGSITKTFTAHLLADAIERQEISADTRVEDVFDELKGTSAG KVTMEQLATHTSGLPRITNVSMSSNFTRKDPYTADLGEFLDTVSDLEVTPGEIAYSNTGY ALLGQAVAKKAGKDYPTLVRERLLEPLGMDQTTVPSTPEDLPADHPTGYTAKGLPAGAWT MHAYAPAGSIRSTTKDISTWLIAVRDGKAPGSSVEPTKVRAEEDTKKLGLAWNTKEEDGA TVIWKNGGTGGYTSFAGFNANGDGVVVLNNTATNSDDVIDYLFDAEDTK >gi|294972172|gb|ADNU01000018.1| GENE 47 48771 - 49343 400 190 aa, chain - ## HITS:1 COG:Cgl2362 KEGG:ns NR:ns ## COG: Cgl2362 COG0640 # Protein_GI_number: 19553612 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 78 190 51 163 165 73 32.0 2e-13 MSTSSDELRALREDITQQLSRLDARLRDVEDRLRGEPRETHTRSHDAEVTQPQLPTESGD HEFWALNELSKRYDQPVVMFAGTAKTDGGPVMWQYERFAENLMDTDAFAVSPALEAIAHP IRLTLLLAIINGTTTSAQLGELEQVGTSGQVYHHLSQLNAAGWIRSVKRGQWEVPASKVI PLLTIILAAQ >gi|294972172|gb|ADNU01000018.1| GENE 48 49369 - 50013 572 214 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394886|ref|ZP_06805099.1| ## NR: gi|295394886|ref|ZP_06805099.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 24 214 1 191 191 353 99.0 5e-96 MRANSSTDFSRNLPLGRSALWLCVGYGLGAVIGWAVHVLFNVGHPQYSSALTLMWPLLIG LMGGVLLVIGTMPASRIAISVSTANALEQEGTPGLARIRYLNSTTNGSFKTLTVSLDVAS SSSRVYRSELVWKLSAVDALKLRPGATIPVRIDPQAPSRVVFDTRATSNDLGPDPNEVFS VRNRFRRRLSMIRPASCIATLVGFVIGLGIGLFT >gi|294972172|gb|ADNU01000018.1| GENE 49 50126 - 50698 641 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394887|ref|ZP_06805100.1| ## NR: gi|295394887|ref|ZP_06805100.1| conserved protein [Brevibacterium mcbrellneri ATCC 49030] conserved protein [Brevibacterium mcbrellneri ATCC 49030] # 17 190 1 174 174 293 100.0 3e-78 MTQTSEKEVQLATAPWMIARGVLGVIFAIVAAFVPREQLGSVAQLALRVDFVDYLLMGYI GLNALLLVGQGSATKPLRTHLWGQAVIAIPALVFLMFASYPGQLRAAVMGWALLHAALEL WMYKDMRGTASASDYLYSGIAHALLGILLLFGNNFGALTIIGFTSAAVLIAGVLYILGGL TRRKQGRKDS >gi|294972172|gb|ADNU01000018.1| GENE 50 50718 - 51965 1272 415 aa, chain - ## HITS:1 COG:DR0744 KEGG:ns NR:ns ## COG: DR0744 COG0642 # Protein_GI_number: 15805770 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 114 411 239 550 566 112 29.0 2e-24 MRLRPASLRFKILIVIVTSVVIAVLTCGLIVRQAAARAEDNRMRDNISSQLREASSIYSE TGVLTLNAAVDDPALPEPAKEAALNGQSVTMRSEIDNTEVVWAAAPIMVGSHTAVISVRT TTAESRELVGDIDRAILISMLVSAVVIGGIGFVVAGQISRRLTLGAQAARRIASGDTTVR ISDVVEHGDDEVTAFAEAVDTAVERLAERLDSEQRFTADLAHEMRTPLTGLVNAANLLEE DSRPAELVRERTERLQTLVEDLLEVSRLDAGSTTPDFETVNINHMLKSLLLNLRSSGLIV DHEIQEVYADPSPQITTDPRRFERIVSNLIANSIKHGADPIRIETTPHSVIVTDSGPGYP ADIIAKGPTRFVSSGGGGMGLGLVIAQGQAKLLGMRMEFRNAPEGGAQAEVVFPE >gi|294972172|gb|ADNU01000018.1| GENE 51 51969 - 52769 818 266 aa, chain - ## HITS:1 COG:all4503 KEGG:ns NR:ns ## COG: all4503 COG0745 # Protein_GI_number: 17231995 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 3 264 24 252 253 147 37.0 3e-35 MHIVLVEDDEVIRETTQLALERFGYTVTGFEDGRDGYEFIASQGADVVLLDLMLPTMNGA SITRAIRERSNVPIIVISARSEPIDIVQALEAGADDYLTKPFDMQVLNARIRTVVRRFIT AESAQMGFSPQSEEPEEESSVSLDTQGIPEVLGPTPGHTNPTPRQQSSTEIRVENRLGTL VLDTARCMVYVNGEEIHLTPTELRILMLLTEEVGHVSSREKIAYTVWGYEWGGDSRVVDV HIQRLRKKIGAAMIETVRGFGYRFCA >gi|294972172|gb|ADNU01000018.1| GENE 52 52838 - 53470 427 210 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394890|ref|ZP_06805103.1| ## NR: gi|295394890|ref|ZP_06805103.1| possible preprotein translocase subunit SecA [Brevibacterium mcbrellneri ATCC 49030] possible preprotein translocase subunit SecA [Brevibacterium mcbrellneri ATCC 49030] # 1 210 9 218 218 427 100.0 1e-118 MVSTPYIPAHFKASFRSSYRTLVTVLCALFCTLGLAGSLTACGPDTSLRVEEEHVDNAPE APPTSEAGPRDQPFSATQIRDELLQNPSVSNVKGFDEIHDIVLACESCMEMDPALVVLGD KFQMAKINTPADRKSFATVVIGEREGQPNIELILVGNELTVTPGRGGTLVAQESVFKPND EPCCPSGWAVRVFRYHDGKFEAGQRISRLD >gi|294972172|gb|ADNU01000018.1| GENE 53 53517 - 53774 213 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394891|ref|ZP_06805104.1| ## NR: gi|295394891|ref|ZP_06805104.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 85 1 85 85 140 100.0 3e-32 MTSAHKRPVAAPYKHAVIFGVICAWVVLIVTIVSMGAWKSSQALLLAVGFSAGTFVVVTL IAMGLNAVVAKQHHESDTQDGPVLH >gi|294972172|gb|ADNU01000018.1| GENE 54 53842 - 54048 210 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394892|ref|ZP_06805105.1| ## NR: gi|295394892|ref|ZP_06805105.1| probable copper binding protein [Brevibacterium mcbrellneri ATCC 49030] probable copper binding protein [Brevibacterium mcbrellneri ATCC 49030] # 1 68 1 68 68 100 100.0 3e-20 MPISTFSVSGMTCEHCVRAVKQEVGDISGVTQVEVELGTPSTVTVQSTEPISHQDVVAAI DEAGYEVV >gi|294972172|gb|ADNU01000018.1| GENE 55 54049 - 56202 2148 717 aa, chain + ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 8 699 16 745 755 539 47.0 1e-153 MSGTRTRDVELDITGMTCSSCANRIEKKLNKLDGVQATVNLPLNSALVEVGPDVPNDLLL ATVEKAGYSATVHNPVDPVPDNPDPRGFRPRLLVGFILGIPVVVISMFVHFPGWQWVVLA LALPIITWGGWPYYVAAYKAARGGLGTMDTLITLGVWAACGYSFYRLIRAVSTQGFAISP HEYVWFESAVAIIVFITLGRLIEEGAKNRATRALKELLELGASSANVIRDGREWKVPVEK LSVGDEFRVRPGETIATDGEVISGESAVDESALTGEPTPVDVGPGSTVTGATINTTGSMV VRATRVGEDTAFAHIAKLVSRAQTSKPAMQRLADKISGIFVPVVIVIALLTLMVWGVKGD WTGGLYAMIAVLVVACPCALGLATPIAVVTVSQLGSENGIVVSGPEVMEHARKVTTVVLD KTGTLTRGHMQVVSHDLGERELTLAANAERNSEHPIARALAEASTEELDVTDFTSIPGGG VRATVDGHSVLVARPQLVSEETGAQILPSDTTRVAVAIDGNYAGVVDVADTIKDSSAHAI ASLHKLGLKTVMLTGDAPGPANAVANELGIDTVIADVRPEHKLDHIDQLQKSGEHVAMVG DGVNDAAALAQANLGVAMGEGTDAAIAASDVTLTRSDPAAIPAAIRLARMGVALIKVNLF WAFSYNLVMIPFAMFGKLDPMLAGQAMAMSSILVVLMSLVSVVPMSRVLERTMQGNT >gi|294972172|gb|ADNU01000018.1| GENE 56 56232 - 57953 1220 573 aa, chain + ## HITS:1 COG:BH3839 KEGG:ns NR:ns ## COG: BH3839 COG3290 # Protein_GI_number: 15616401 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Bacillus halodurans # 183 566 168 531 538 155 29.0 2e-37 MGVAGRILVASSVLLLGIVIVISTVLYIFFSDRHSQDEEERVVSTAVAVATTVDLHSMGH SQLSRTLSELKRLNELDLLVSVPLSELKKGKPGVSDPQGAVGDHDADRAGTQVHTGGNLD EVPDFSLSVIQQVANGDTVTVYLPDEHGGTLYTLVGVKPTPPGYQRAVIVAGIDRSTVRA SFQPVGNLLIASGAFTFVLGTAAIWLTSRGLKRVTGDYGTKELAHLIAYYRSVLEAVNDG LLLVDRNEGIVLYNDTARELLGLPVTDSSIQFDQIPVPETLRNLIESGRLVRDEIHYTAS RVLLVNQQPAREYMHDEPNVDTWVVTVRDHTELRKLTGELVSIRSFSDSLRSQTHEFANR MHIIASLIETGNPEEALEFATQSVAHTSTAPEDLLGGFNQPVIAALVYTKLAQAKEDNIE LHVDASSLGSTIPGDERDLVTVLGNLLDNAFDAVNRPDIPADRKKVELTMSGSTASGYTI TVRDDGPGIPDDTVDNIFERGWSTKHDGVEHDTGQGVKTDGSRGVGLDIVVQAVKRLGGA IDVDGGLGDEADQGELRGAEFSVWLPGAPDVTG >gi|294972172|gb|ADNU01000018.1| GENE 57 58009 - 58716 339 235 aa, chain - ## HITS:1 COG:no KEGG:cpfrc_00042 NR:ns ## KEGG: cpfrc_00042 # Name: not_defined # Def: hypothetical protein # Organism: C.pseudotuberculosis # Pathway: not_defined # 14 234 11 237 237 146 39.0 6e-34 MEKSWTPAVPIYSLPPAVLLPHLVWAVLSMFGMGAGALVGGLFLGFIVKSGSWIAFGVAV FGAVGGLGTLWFGLRHRMKWTLSELGFRTSSRSLWHLLWWAPLTLLLSATASAVVGSLFE VAPGERSLDESMHLGIVPQIAVVFCSGIALPFLEEIFFRRALLDWLQRFTPVWVAGLISV LVFSLAHVAPPLMTYTLFLGTSLTLARFWFKTMKAPFLIHAFNNLVVSIMALVAI >gi|294972172|gb|ADNU01000018.1| GENE 58 58899 - 59621 231 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 11 233 3 221 226 93 28 5e-18 MWRSSEQKFGVLVVEDEEVAGRAHANYVSRLDDFYVVGIAKNASQALAVMLGQVPAIDPK AIDLVLLDMNLGDGHGIQLLRAFRTHRVNVDAIAVTASREFNVVHNAKSLGVFQYIVKPF TFPVFRTKLEAYVEYRRSLEDCPEKASQQEIDALMSTFSSEPKVRLAKKVPADIQHAVLA ALKGGQALSAAEAGDLLGVSRVTARRYLEAMANSEILKRQPRYGSAGRPVLEYTLPDGAE >gi|294972172|gb|ADNU01000018.1| GENE 59 59713 - 61131 1295 472 aa, chain - ## HITS:1 COG:purB KEGG:ns NR:ns ## COG: purB COG0015 # Protein_GI_number: 16129094 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli K12 # 8 459 2 448 456 417 48.0 1e-116 MTRVTLADLDPAIALGPLDGRYRGDAAPLVDYLSEAALNRNRIHVEVEWFIHLLESNVFQ GVRELHDDEKRQLRGLVETFDHSTISQLAAFEAVTVHDVKAVEYLIKEALSHIGADDLSE LVHFCCTSEDINNLSYAVGLKGAIEDVWLPRARALIDALAQMAEDLADTPMLSHTHGQPA TPSTMGKEFAVFVHRLARQYRRIENTEYLGKINGATGTYAAHTVAAPGVDWPHVAQTFVE KLGLTFNPLTTQIESHDFQAELYADLARFNRIAHNLATDMWTYIAMNYFIQIPVEGATGS STMPHKVNPIRFENAEANLELSCALLDSLGSTLVTSRLQRDLTDSTTQRNIGVAFGHSVL ALNNLVKGLGRLAINTDALNADLDSNWEVLAEPIQSVMRAAYLLGVPGMDNPYEKLKELT RGHRVTPEQIREFIAGLGLPAHFEKALTQLTPATYTGVAADLARTEVAAWRA >gi|294972172|gb|ADNU01000018.1| GENE 60 61377 - 61631 143 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394898|ref|ZP_06805111.1| ## NR: gi|295394898|ref|ZP_06805111.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 84 1 84 84 133 100.0 5e-30 MDTSFEIAIKEWMHIADTLRTHGHQTSNLQGVAWHSISADAFKRDVEARATDFHTAASLA ERVSHALAVHGQAVEAVSKVVLGR >gi|294972172|gb|ADNU01000018.1| GENE 61 61628 - 62188 304 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394899|ref|ZP_06805112.1| ## NR: gi|295394899|ref|ZP_06805112.1| hypothetical protein HMPREF0183_0610 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0610 [Brevibacterium mcbrellneri ATCC 49030] # 1 186 1 186 186 387 100.0 1e-106 MIVGINTDVLDDFSDELTRCWPESMRPQDPKSDGPREFHQYVVHAFLGVMNVAEIVAHVR FTGEHDIRCCAYMAGPTCVALMQYAGDDCPECVEKRHMVVGYVIQPAYFPVLCSENVLPQ GHMNITGLIRPGLAVLERAGQKIPWSDAPLAVTGQAPSLQHSVETAVRAHMRNVGMYIDT VNNAST >gi|294972172|gb|ADNU01000018.1| GENE 62 62188 - 63630 791 480 aa, chain + ## HITS:1 COG:no KEGG:Celf_3243 NR:ns ## KEGG: Celf_3243 # Name: not_defined # Def: hypothetical protein # Organism: C.fimi # Pathway: not_defined # 74 480 81 523 523 140 29.0 9e-32 MSGGARGVSAHLDDMEKKADELERLARELALVGTRSLVAQGDLELGVSVIASVPTWLEVR QTMGEFTVFVGASATRLEATAVALRASVRAYRQAQQISERIIDDALTAVGNIAGHVARGA LFLLTPAVIATYLPVLAVDLQTNLVRRVLGHDGPDFVLTRTLAKNARDIAQRGIDNLTQK AFTHPEVSRPVIEYVIPGFVGGFVGLPPNIQNLFRTPHSSEQVTTMMVNTGYTVGVFDSS VTVTKVGESRELQTHPTNLSELYARQRSVHSGKDNGQVRVDKVRGADGVERVVVYVPATT DWSVGSGNGTDMQTNLETIAGKDSAMRKVVRQALEDAGVDSSTEVMMVGYSQGGIVAMSL ADDPDFTAKYNVTTVVTVGSPVSDYRVPDSVEVLSIEHDHDLVPQLDGRKNPNQHNWTTV TTSPHLGQGQQAQDAHSGDVYADAISGIEDDPDVQEFKRKRGEFFGGTVTESHQYEGTRP >gi|294972172|gb|ADNU01000018.1| GENE 63 63771 - 64907 1138 378 aa, chain + ## HITS:1 COG:MT2572 KEGG:ns NR:ns ## COG: MT2572 COG1071 # Protein_GI_number: 15842025 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 15 369 20 364 367 263 42.0 5e-70 MTSTSNPTTGVDDVVQMLTPDGTRVPNSDFDAYAHELTVDDLKGFYRDMVLIRRVDAEGN ALQRQGQLGLWVPLLGQEAAQIGLGRALRPQDYVFPTYREHGVAWCRGVEPETLLGIFRG QNHSGWDPKDNNFNVYTIVIGSQVMHATGYAMGVQIDGAVGTGDMDRDTIAVACCGDGAT SQGDVSEALTFAGAFRAPVLFYIQNNQWAISEPNKVQTSVPLYTRGQGFGVPGVRVDGND ILAVYSVCRAYADRIRSGQGPMLIEAYTYRMGAHTTADDPTKYRDDAEVEAWKPKDPILR VRKYLENTNDVDAAFFTAIDDEADALAERIRSACVNMEPPPVDEIFDSVFVEPHPMIEEE QREYKEYLASFADVEGDN >gi|294972172|gb|ADNU01000018.1| GENE 64 64910 - 65884 1119 324 aa, chain + ## HITS:1 COG:MT2571 KEGG:ns NR:ns ## COG: MT2571 COG0022 # Protein_GI_number: 15842024 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 3 322 25 345 348 328 53.0 8e-90 MTTMPLSKGITAGLRKAMEDDPKVVLIGEDIGKLGGVFRVTEGLQKDFGEHRVIDAPLAE SGIVGSAIGMAKRGFRPVVEIQFDAFIFPAYDQIVTQLAKMHARTRGAENLPVVIRVPYG GGIGSPEHHSESPEAVFAHHAGLKIMSPSNAHDAFWMIQEAIHSPDPVMYFEPKRRYWLR GEVDEANRGLDPYSAQIVRPGTDLTLVTYGPLVPTAMDVAVAAEEEGKSLEVIDLRGLNP IDFSVIEDSVKRTGRLVVTHEAPVFLGLGSEIAARITERCFYNLEAPVIRVGGFHTPYPG SKLEEHYLPDLDRILDGVDRALAY >gi|294972172|gb|ADNU01000018.1| GENE 65 65894 - 67264 1254 456 aa, chain + ## HITS:1 COG:BS_pdhC KEGG:ns NR:ns ## COG: BS_pdhC COG0508 # Protein_GI_number: 16078524 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Bacillus subtilis # 1 456 1 440 442 223 34.0 6e-58 MSNEFNLPDVGEGLTEADVVSWKVGPGDTVTVNQILVEIETAKSLVELPSPQAGTIEAIL VEEGETVEVGTPIVRFGGAQGVATPNTAEGAEQNQSAGDEESGPNLVGYGTKASSTKRRP RKGGATPAAATSAKAEPAPAPAQGASATATSAPAETRASTPSKPLAKPPVRKLAKDRGFD LGEVTPTGPNGQITREDVLNHGTTSAQGAAESHAQTAAPVGSGALDGTEERIPFKGVVKF MAQAMVDSAFTAPHVTEFVDVDVTETMNLVRKFKANETLGEGVKVSPLLILSKAVCWAVT RNPRINSALDGDSIVVKKYVNLGIAAATPRGLIVPNIKNAHAMGLSELATELGELTRTAR AGKTTPADQAGGTISITNIGVFGIDTGTPIINPGEAAILAFGQIRKRPWVVGDDIVPREI TTLGVSADHRVVDGEVISKFLADVARAMEDPTLLLV >gi|294972172|gb|ADNU01000018.1| GENE 66 67360 - 68181 628 273 aa, chain - ## HITS:1 COG:no KEGG:Gbro_1246 NR:ns ## KEGG: Gbro_1246 # Name: not_defined # Def: pyrrolo-quinoline quinone beta-propeller repeat-containing protein # Organism: G.bronchialis # Pathway: not_defined # 115 270 603 762 765 80 33.0 1e-13 MHNGDGSRPRIRPAVSNRFDSSSYYEYLERQTANSDPQAQPAQQRQVIQPSQNSAQQPSP QSLQHNQAHSQLHGQPTQATPPPAPRKSKSSMWLSAMAAIAVVALLITVGVVLLGPNKGV EPTPPQGKPATKSDDAPSSPDEPESTNEQAKSELETIVSDSKSELSALEEKWVVQLSAKQ PNDNAGDEEWDYSKILKEYQDNEKTYGTLAMLKSEDWSSFRVKDYWVTVIPTGYDSPEPA LKKCEEFKLDRDNCFAKRLSHTKGPDGSTKLRD >gi|294972172|gb|ADNU01000018.1| GENE 67 68334 - 68558 113 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVVLTIGQLCSHCEQRARPSLTGHQLFPAGVTSVLSEPSNLLKHGPHRALTSPQETIVM LKREGFGPVNLMSN >gi|294972172|gb|ADNU01000018.1| GENE 68 68576 - 68812 335 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50955925|ref|YP_063213.1| 50S ribosomal protein L28 [Leifsonia xyli subsp. xyli str. CTCB07] # 1 78 1 78 78 133 80 4e-30 MAAVCQVTGTTPGFGHNVSHSNRRTKRRFDPNIQKKKYYVPSLRRNVTLTVSARGIKVID RRGIDTVVAELLAKGVKL >gi|294972172|gb|ADNU01000018.1| GENE 69 68812 - 68979 270 55 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|88854441|ref|ZP_01129108.1| 50S ribosomal protein L33 [marine actinobacterium PHSC20C1] # 1 55 1 55 55 108 92 1e-22 MAKAQDVRPIIKLKSTAGTGYTYVTRKNRRNTPDRLVIKKYDPVVRKHVDFREER >gi|294972172|gb|ADNU01000018.1| GENE 70 68983 - 69288 466 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62425525|ref|ZP_00380658.1| COG0199: Ribosomal protein S14 [Brevibacterium linens BL2] # 1 101 1 101 101 184 90 3e-45 MAKKSKIARNRQRLEIVERYAERRAELKRQLVSPDSTDEQREEARLGLQKLPRDASPVRL RNRDQVDGRPRGYLRKFGLSRVRFREMAHRGELPGVTKSSW >gi|294972172|gb|ADNU01000018.1| GENE 71 69349 - 69633 434 94 aa, chain + ## HITS:1 COG:BH3356 KEGG:ns NR:ns ## COG: BH3356 COG0776 # Protein_GI_number: 15615918 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus halodurans # 4 90 2 88 90 70 45.0 8e-13 MAKNRSELVAEVAEKTGLTQKQVSDVLDGVFDSFADVVSKGEKLTVPGWLSVERTERAAR KGRNPQTGEEIQIAAGYSVKLSAGSKLKAAAGKP >gi|294972172|gb|ADNU01000018.1| GENE 72 69758 - 70624 1005 288 aa, chain + ## HITS:1 COG:BS_ykrU KEGG:ns NR:ns ## COG: BS_ykrU COG0388 # Protein_GI_number: 16078421 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Bacillus subtilis # 3 282 5 255 259 131 33.0 2e-30 MRVSAIQLGYSDSESLEDRVERATHMVESQREADLIVLPELWAPTGFDYTKWGKAAQAVD GPVIERIAHAARSVGAYVHAGSIIEASPHALDRLKDANYDVKALPVLADDERGLWNTSVL INPDGQIQATYRKIHRFGFGSGEPKLLQPGTEIVIPTLNIDGRETKFALATCYDLRFPEL FRQMVAQGAEGLIIPAAWPAPRVREWSALLLARSIENLFPIVAVNTAGYHGGTQMGGHSV ILDAAGLPLAEAGEAQTIITATIDLDATEARRERFPALDDRRLNYTLN >gi|294972172|gb|ADNU01000018.1| GENE 73 70659 - 72779 1680 706 aa, chain + ## HITS:1 COG:Cgl2402 KEGG:ns NR:ns ## COG: Cgl2402 COG3336 # Protein_GI_number: 19553652 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 17 704 24 696 717 251 28.0 3e-66 MTTLTTRTDTKTTATASGKGARTWVMPIYVVFGLLGGAAAMVLTGAWAPTLIGDAGPLAR LGLPVAKFVFNSAMTLTVASLIMASMVFPRTDSVPRDRKKSATREEDLDLAWLGSVQIAQ VASVVWTVAGVAVLVLAYVSTAGGQAYAGNFSAQLGQYVSQVDSGRLWLTIVLASAVTST VIFAVRSFAGIAWATAFSLFPLIPLALMGHTVGASGHTQAVNSLGLHLLAVIMWVGGILV LALLAPRLIHRADLRNIVERYSQLALAAVLVVGFSGFMNAILRVKSLSDWQTPYGMLIIA KTVATIAVAVIGLWHRKFVIGRLGESLNTRAQLRAKRGAQPTADQVSARVEFWRLLLVET ALLAATLGAGIALARSQPPIPQEAPPAPTPAEILSYESLPPEPTFSNYFTQWLWDPLWLV VAVGASYLYIRGYLAIRKKGGEWPVMRVIWWITGMALLVYVTCGGPVVYGRVLFSGHMIQ HMLLVMVVPLPMVLGAPITLLMRAAPTRQDGSRGFREWILLLIHSRYLRFWAHPIVASIN FAGSLVVFYWGGLMWPALKTHVGHEIMIIHFLAAGYLFSAALVGIDPGTKRYPPAISFLI LLITMAFHAFFGISIMGATTLIEGDWFGNIGQEWIAAIDDQQLGGGIAWGIGEIPTLLMA IIAAIHWNQQSEREAKRRDRSEDRTGDSELRAYNEMLERLNKAQKR >gi|294972172|gb|ADNU01000018.1| GENE 74 72917 - 73837 848 306 aa, chain + ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 6 305 12 310 438 221 40.0 1e-57 MSTHTQKTADTSTLSRVVAASMAGTVVEWYEFFLYASAATLVFNKILFPPADDPLTPILL AFATYAVGFIARPIGGIVFGHFGDKHGRKKLLQLSIILVGVSTFLMGCLPTYAALGAIAP ILLVLLRFVQGFAVGGEWGGAVLLVAEHSPKESRGFWSSWPQSGVPLGNLLATAVLFVLT AVLPEEQFISWGWRIGFWLSAVIVLIGWYIRTRVSDAPIFQEAQKEIHHEDKSYGFFEVF KRYPRGVFCAMGLRLVENIHYYLVVTFSITYLSTQVGIKSHEILGLLLGAHAIHAVCVPF VGRLAV >gi|294972172|gb|ADNU01000018.1| GENE 75 73826 - 74827 612 333 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 54 333 1 263 263 137 35.0 3e-32 MTHRNSPLSVEGRRRLVERCKTRPIAHVAAEMGISRATASKWVHRHREFGEVGLLDRSST PKQSPTATPNVVVREVERMRREHKWSAARITFELEQVGIQISRRTVSRILTDLQLNRRRF IDPTGESNREARKIVARCPGHMVHLDVKKVVRIPDGGGWRAHGKDSPEARAVARTKTRGT RAGYVYLHSAIDGYSRLAYTEALPNEQAATAVAFLARARAWFAAHGITHIERIVTDNGSC YRASAFADALAGSRHQRITPYTPRHNGKIERYNRILAEEFLYARTWTSEDERANALERWN LHYNYHRPHGAADGQPPATLVPIRVNNVLASYS >gi|294972172|gb|ADNU01000018.1| GENE 76 74897 - 75442 372 181 aa, chain - ## HITS:1 COG:no KEGG:Psed_6718 NR:ns ## KEGG: Psed_6718 # Name: not_defined # Def: cytochrome c biogenesis protein transmembrane region # Organism: P.dioxanivorans # Pathway: not_defined # 1 159 127 283 319 110 57.0 2e-23 MLVFGIGYALASLSCTFGVILAVIAQAQATASYAGLLLVFGVYAAGSASILLLLALATTA AGTGLTRHVARLGSYGPRITGAVLLLTGVYLAWYWWPAATADNNLVATGRAGGVARLSTT LSGWVQAHTAPIAALAVISLLVVLALGAAHRRRRASSESPEACCDTTNVGLGVSGGDHEG Q >gi|294972172|gb|ADNU01000018.1| GENE 77 75385 - 75816 220 143 aa, chain - ## HITS:1 COG:no KEGG:Psed_6718 NR:ns ## KEGG: Psed_6718 # Name: not_defined # Def: cytochrome c biogenesis protein transmembrane region # Organism: P.dioxanivorans # Pathway: not_defined # 1 114 1 114 319 112 75.0 7e-24 MGGLLSLAFAAGMVAPVNPCGFALLPAWISQTLGDADASPVPVRLLRALRSGIALAIGFA GTLAAAGLLVSAGARGLIQAAPKLGLAVGVLLVLLGLWMLAGRSISVRLPRITGRATEGL RQPPGCWSSGSATPSPPCRAPSE >gi|294972172|gb|ADNU01000018.1| GENE 78 75820 - 76344 486 174 aa, chain - ## HITS:1 COG:no KEGG:Psed_6719 NR:ns ## KEGG: Psed_6719 # Name: not_defined # Def: Redoxin domain-containing protein # Organism: P.dioxanivorans # Pathway: not_defined # 25 174 32 188 188 125 51.0 6e-28 MTLTRTRRATLSVAGLLLAGSLALTACGNTDATPAADAGTPAAVTSIDGQMVSLPASGKP TAVFFFSVGCGECVEGVRSLGEAATAAEKSGAGASFLAVDMDPGESKETIEGFMEYVDAE HVPAAIDEGAALSQRFDVAALSTLIVIDGDGKVTFRATEPDAKTITAELVKAGA >gi|294972172|gb|ADNU01000018.1| GENE 79 76341 - 76640 215 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394916|ref|ZP_06805129.1| ## NR: gi|295394916|ref|ZP_06805129.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 99 1 99 99 125 100.0 9e-28 MKSNHDDQPGGSGLLLGAGAALLMVACCALLPLLLAGGLLASVGGFLGNPWVIGTGIAVL VLAVLATTRRRSGGNNARHGCCPPVNSTHPSDTKDDQNR >gi|294972172|gb|ADNU01000018.1| GENE 80 76670 - 77044 292 124 aa, chain - ## HITS:1 COG:no KEGG:Ksed_25630 NR:ns ## KEGG: Ksed_25630 # Name: not_defined # Def: alkylmercury lyase # Organism: K.sedentarius # Pathway: not_defined # 3 119 106 222 227 159 72.0 4e-38 MRLDTLIFPTLLERAASVESVSPTSGEPIRVTIDPVAGVTSVEPATAVVSLVNPDQITSI RSSFCNQVHYFTSDEDAAGWLAEHPRAEVVPVAVAYRIGTDLTTGFLNQFQANAAVADDG HCRC >gi|294972172|gb|ADNU01000018.1| GENE 81 77026 - 77331 342 101 aa, chain - ## HITS:1 COG:no KEGG:Mflv_3214 NR:ns ## KEGG: Mflv_3214 # Name: not_defined # Def: alkylmercury lyase (EC:4.99.1.2) # Organism: M.gilvum # Pathway: not_defined # 10 98 6 94 213 124 71.0 2e-27 MSELTTQLPERLNNTEETGLDAVLLIPLLRLIVEGGPVTVEQFAAAAGRPVDAVRTGLAA VPDTEYDDQGRIIGQGLTLRPTPHRFTVAGEELYTWCAWTP >gi|294972172|gb|ADNU01000018.1| GENE 82 77377 - 78801 468 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 3 470 2 458 458 184 28 2e-45 MQSRYDLAIIGSGGAAFAAAIRATTLGKSVVMIERGTFGGTCVNTGCVPSKALIAAAEAR QTAAEAGNRFPGIATTADDVDMPALISSKQDLVEELRGEKYVDVADAYGWQIRHGDAAFA GTPEAPVLEVTATDGAVETIDADHYLVATGASAWAPPIDGLEEAGYLTSTTAMELTKVPD SLLVLGGGYVALEQAQLFARLGSKVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVRRA VPTHVARDDVRGQVVVTADISGGEQEFHAEQVLVALGRRPVTDGLNLDAVEVKTGDTGEI VVTDQLQSSNPRIWAAGDVTGHPEFVYVAAHHGNMVAENTFAGAERSVDHSRLPRVTFTS PAIGAVGMTEAQVLAAGIRCDCRVLPLDYVPRALVNRDTRGFIKIVANAETGEILGLTAV AKDAGELAAAGVHILGKTVTEVADAWAPYLTMTEGIRIAAKAFTTDISKLSCCA >gi|294972172|gb|ADNU01000018.1| GENE 83 78907 - 79296 369 129 aa, chain + ## HITS:1 COG:MT3438 KEGG:ns NR:ns ## COG: MT3438 COG0789 # Protein_GI_number: 15842931 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 1 126 1 126 146 125 50.0 2e-29 MRIGELAEAAGTTAKTLRFYEEQGLLPAAERTASGYRDYDPEAATRIDFIHRGQAAGLTL AQIKQILDIRDGGEIPCGHVRDLLDVRLKDIERQISDLVSLRDNVAALRDAAAEPEPETC NADEVCRYL >gi|294972172|gb|ADNU01000018.1| GENE 84 79627 - 80808 792 393 aa, chain + ## HITS:1 COG:mlr2471 KEGG:ns NR:ns ## COG: mlr2471 COG2814 # Protein_GI_number: 13472242 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Mesorhizobium loti # 1 358 1 354 394 150 34.0 4e-36 MPFSLYLLALVVFAMGTSEFMLAGLVPDISTHFGVSLGTAGLLTSAFAAGMMIGAPAMAA LTRRLPVNGTLLGCVIVFALSHVVGALTPDFTVLFVTRVIAAIVNAGFLAVALGAATQLV APDAKGRAVAVLLAGTTVATVAGVPAGALLGTALGWQSTFWAIAFLCVPAAIGIAAGFTT RTDSSSREDPSSTSLRVELAQLASPRLVLTMMLAALVNAGTFATLTFLAPIVTETASLSQ WWVSVALVLFGVGSFIGVTVAGRLSDARPRVVIVGGGSVLVLGWLALALFATNPVALLGL VFAQGVLGFAVGSTLITRVLYAAAGAPTMAGSYATAALNVGAAVGPVLAAAALSVTPGAL GPVWVAVFATATALLLAVPLLRLIAPVESEAVK >gi|294972172|gb|ADNU01000018.1| GENE 85 81047 - 81376 89 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLALGGIGEIPEVEGAAELFRGQVIGISHESLQQDRGLMNEENTPGRACGDPVSYRRTSR TPRPLPGRGLENRCCQLMGGILAGIGTAVRDVSALHSRRCAPCEADHLW >gi|294972172|gb|ADNU01000018.1| GENE 86 81290 - 82408 733 372 aa, chain + ## HITS:1 COG:CT836 KEGG:ns NR:ns ## COG: CT836 COG0016 # Protein_GI_number: 15605571 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Chlamydia trachomatis # 27 255 109 340 342 96 32.0 9e-20 MAYADYLTPEQLCRALDLRDLTDPAQGEHAIQALLSAVVASLEYTWGSTIRYVRSSPIVS ITANYDRLGYARGDVTRARRYTRYISPTAMLRSHMSAELPTALEAYAGCGDVDELIVAPG LVYRRDAVDRSHVGEPHQVDLWRIRSTPDTRDEDMLDMIEELVDAVLPGAEWRITEADHP YTVGGRQIDVRHDGEWLELAECGRIHPEVLRGSGLDPEQWSGLALGMGLERALMLRKAIP DIRYLRAADPRIAEQMLTLEPWQHVSSLPPARRDISVVVTDEEDEETLGDRIRTALGDDT DLIETVAVLSRTEHENLPETARARLGTRPGQVNVLLRIVLRPIDRTLTADQANSIRNTIY RAVHEGPVMELI >gi|294972172|gb|ADNU01000018.1| GENE 87 82440 - 82928 264 162 aa, chain - ## HITS:1 COG:all1149 KEGG:ns NR:ns ## COG: all1149 COG5500 # Protein_GI_number: 17228644 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Nostoc sp. PCC 7120 # 3 144 5 146 162 58 32.0 5e-09 MFDCIFTSVLVAGVVTNGLLAGVFFAFSCAINPGFRHIDDRSYVGAFRAINGVILNGWFL SVFLVAPLTAVAGAILAVGREDVSAFGWLVVGAACSVLSFGITAAGNVPLNRALDRAPAD TAQRLRDTRKGFEAPWNRWNHTRTVLSTGALVTLVIAASGQS >gi|294972172|gb|ADNU01000018.1| GENE 88 82934 - 83803 524 289 aa, chain - ## HITS:1 COG:mlr1271 KEGG:ns NR:ns ## COG: mlr1271 COG0702 # Protein_GI_number: 13471328 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Mesorhizobium loti # 1 260 6 267 296 119 34.0 5e-27 MYIIAGVTGRVGSVTARRLLDAGADVRVLVRRQIDAEAWTAQGAETRVVELSDQTALSDA LEGATGVFALLPFDLTADDLDAHADALIASISGAVVNRRVPHVVMLSSGGADLAEGTGPI VGLHRLERALLTTGAVVTALRSGHFQEKVVDVVGVARDSGVYPVFAASAEAPIPMIATRD IGVAAAQMLLSPPARSESVDIVGPAYSERDVARVLGTALGRELHVATMPEDTWIEVLVNA GFRPHIAESLAELYRADEQGLLAPRGDRIIRGESSLEVTIDRLLTSGLG >gi|294972172|gb|ADNU01000018.1| GENE 89 83949 - 84905 567 318 aa, chain + ## HITS:1 COG:mll0782 KEGG:ns NR:ns ## COG: mll0782 COG2207 # Protein_GI_number: 13470944 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 13 313 19 316 329 187 36.0 3e-47 MEVIPRFEHQARVARVLHTLRMRSTFYCHAELSEPWALEMPAIADSVSFHVVTAGTCWLR LPEANSIELRAGDLALVPHGLGHHLLSEADARRGPRVDLLPQEYLSTNYSILQHGGGGRT AQLICGVVSFDEPAARELMRTLPAVMFIGGDTLSAASSIKDTLRLMAGELGHPQIGGEAI ATRLADVLVVQAIRSWLISDATAPTGWLRALEDDRIGRALEAIHQNPGDDWNLGRLAKVA TMSRSSFSSRFTALTGEAPIAYLTRWRMSIASSRLREEDITIARLASELGYQSEAAFNRA FTRLNGQPPGSQRGRRRR >gi|294972172|gb|ADNU01000018.1| GENE 90 84921 - 85502 384 193 aa, chain - ## HITS:1 COG:MT1870 KEGG:ns NR:ns ## COG: MT1870 COG0558 # Protein_GI_number: 15841292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 15 147 12 146 209 68 37.0 8e-12 MNRMSSAHPHPDWATLPNLITLLRLGFVVPIVILVLNHAQPVLTVVLLAVFGASDWIDGY LARALNQVSATGAVLDPVADRIGVAMIALALAVAGHLSLGVVLTIAAVDAALAVTYLVTR PARAPKVSRVGKVRTAVLMSGLALIGLSLVPALLPVGTAGRILCVIGAFLHAVAGFGYVR ALLRDSHTDPPDM >gi|294972172|gb|ADNU01000018.1| GENE 91 85499 - 86089 456 196 aa, chain - ## HITS:1 COG:jhp0518 KEGG:ns NR:ns ## COG: jhp0518 COG0586 # Protein_GI_number: 15611585 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Helicobacter pylori J99 # 31 195 25 192 192 60 27.0 2e-09 MFLAQAGEHVTLVLACMLLFAAVDAALGIGAVLPGETGIVLAAVTLSDRAELLAAGVFVA ALGAFLGDHVGFAVGRGLGARLGDTRLIKRLGRDRWEKARYYVAGRFWIVILARLLPGIR TLVAAAAGASAVPYSRFATACSVAALLWAGLWVVGGALIGNALLDVVERYTLPALIVVAA ALVLWLFARHKRGVRA >gi|294972172|gb|ADNU01000018.1| GENE 92 86216 - 87637 864 473 aa, chain + ## HITS:1 COG:BH1050 KEGG:ns NR:ns ## COG: BH1050 COG4585 # Protein_GI_number: 15613613 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 127 335 166 367 371 75 30.0 2e-13 MSGSSNDPAALRRRQTIVGCVVAISGGMSTRWLPDAPVLVLSLIATAAIVLMFATPAARV CVVLAGSVLAATVVRLPELRVEEIVEGLVYGLLTALVLAAPLTTRRAVSQRREFHRRGWE LAAIESRRRASQTREILQRERMNLAAEMHDGLGHSLTLIAVRLGQLSLTPTLPDTDRAEV SGIRTIAADAADQLGLAVRLLRQSEDPAAGWSAPSIDEAVIGARQAEMHVETHIAADLTD RLSDEALNTVARVVQEGLTNASKHAPGQPVTVRVEVEGDTVTAIVCNPRDEEASSAHPLD GGFGLHGLRHRAAMLGGALTVHQMPTQFALTLTLPAHARPSADSAASDGDIVAAEDDAAT LRSRATRAAIAVPSAILGALVFIAVAYFVLANTLSVMTTAQFADISVGDTQETVERSLPA LEMLDPPRDEFPPRPDETCHYYEAEISFFERVDVHVVCFASDQVSRIGTVPAP >gi|294972172|gb|ADNU01000018.1| GENE 93 87634 - 88311 562 225 aa, chain + ## HITS:1 COG:CAC1455 KEGG:ns NR:ns ## COG: CAC1455 COG2197 # Protein_GI_number: 15894734 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 12 224 2 218 225 138 32.0 8e-33 MTPEDRTDTPPIRVLIADDDQLVRTGVAAILASATDLDITALASNGHEAVDAAATHRVDV ALLDIQMPRLDGIGALREIRHRQPELPIAMLTTFSDDHLIADAINAGALGFLLKSDEPQQ LIAGVRALAHGGGAFSPRVARWLATEQQAGHRTRTARDELTALLTERQIELLTHIARGLS NAQIGRAMHLSEGTVKQYVSQLFNTLGIDNRVHAAITAYRHGLIT >gi|294972172|gb|ADNU01000018.1| GENE 94 88610 - 88867 73 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSTEALANLRLDTVASQFCEHRGLRVLDEAERMAETDVPSYRLEVSIVGSASSVGDDRN DFHPLGRTAGAPLGLHWGRCVWISR >gi|294972172|gb|ADNU01000018.1| GENE 95 89076 - 90299 771 407 aa, chain - ## HITS:1 COG:DR0472 KEGG:ns NR:ns ## COG: DR0472 COG0477 # Protein_GI_number: 15805499 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Deinococcus radiodurans # 10 363 10 366 407 218 40.0 1e-56 MSFLTSARGSLATVLITASLDAAGMGLVMPILPALLHEAGVTADAVPLNVGVLIALYAVM QFIFAPVLGTLSDRFGRRRVLLVSLAGATVDYLVLATTSALSVFYIARAVAGITGATNAV TATVIADITPPHQRAKRFGLLSACYGGGMIAGPAMGGLFGAISPHLPFLLAALLSASNLA LTFILLRETRPDSPARSASLAQHRGRPGLSAVPGITFLLVAFGLVQFIGQAPGATWVLFT EHRLDWSPVEVGISLSVFGIVQVLVQALLTGRIVEWIGEAKTVIIGCVTDALGLVGLAIV TDGLSMAPILAALGIGGIGLPALQTLLSQRVDEQRQGRLQGVLASINSVTSIFGPVAFTT IFAFTYINADGFLWLCAAALYVPCVILIVRGTAASPKFGSWASGDSM >gi|294972172|gb|ADNU01000018.1| GENE 96 90338 - 90907 243 189 aa, chain + ## HITS:1 COG:AGl1301 KEGG:ns NR:ns ## COG: AGl1301 COG1309 # Protein_GI_number: 15890777 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 158 49 194 261 115 44.0 5e-26 MAQKQARLDRAAVLRGARHVLNNTGIDGFTTRALAAHLRVQQPALYWHFRTKAHLLGSLA ADVLDREHHASLPESGERWDDFLLRNARSFRTALLAVRDGARLHAEFHRQKSDQMPAGSD APESQIEFLVSEGFAEGSAVRALMAISRYTVGFVLEEQTALDNGCEPVDQDLDFEFGLVA MVEGLASKR >gi|294972172|gb|ADNU01000018.1| GENE 97 91228 - 91494 200 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394933|ref|ZP_06805146.1| ## NR: gi|295394933|ref|ZP_06805146.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 88 27 114 114 151 100.0 2e-35 MFASMQGDSEERASTEMLEWVHDGLESVVAADVDDSHAVPVGAARLGVAFCAADVTEPVL VAPPDRDLDIVGDLHSVELHMRRLAVAD >gi|294972172|gb|ADNU01000018.1| GENE 98 91571 - 94099 1354 842 aa, chain + ## HITS:1 COG:mll5729 KEGG:ns NR:ns ## COG: mll5729 COG0507 # Protein_GI_number: 13474766 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 476 801 301 626 1015 105 34.0 3e-22 MTAGDGYRYLLNAVVAGDGDRDASSALTRYYLEAGTPPGIWLGAGLPGLAGEIAVGASVS EEQLRRLMGHGQDPNSGEQLGRPYRKFATAGERTQRRLDQLPKSLTAGERAAQQALIEAE EAQKPTNAPVAGFDLTFSVPKSVSTLWAVADGGTQALVAQAHHAAIRDVIALLERDVAMT RVGAKGPRGAVAQVDVRGVIATAYDHYDSRAADPQLHTHVVIANRVQAVDDGKWRTLDSR AIHAAVTGLSEHYNAVLSDHLTQILGVGWEARDRGAGRSTAWEIVGVPQELMDEFSSRTR DIEQVKDRLVDEYVSKHGRQPSPKLVWQFRQQATLETRPPKQQHSLSDLTSQWRERATTL LGEDAPTWASALLAGSEQEPLLRADDIPLEDLEQVAEVVVQQVGDRRATWKRWNLHAEAI RQTMDLRFASANDRDAITQQIVDAAERVSLRLTPPELATSSSRFRRADGSSVFRPKGGTV FSSEQVLAAEDRLLAASNDRSAPTVPLAWIEDAARTKNRDGHTLSVDQEQAIAKIGVSGR VLDVLVGPAGTGKTTTMRALRRAWERRYGQGSVTGLAPSAAAADVLAGDLEIGTENTAKW LHEHRLGKWNLTRGQLVIIDEASLGGTFALDAITSHAQQVGAKVLLVGDWAQLAAVDAGG AFGMLVRDRGDAPELVDVRRFKNDWEKQASLQLRIGDTDVIDTYIAHERVTPGGYDEILE AAYQAWRTDLAAGKSTVLIAETLDTVSALNTRARTDRILQGDVAVDGIKLHDGNEASRGD LIITRENNRRLSLGRSWVKNGDRWNVAHANDDGSLTVRRAGSRRRTTITLPASYVVEHVD LG >gi|294972172|gb|ADNU01000018.1| GENE 99 94156 - 94572 255 138 aa, chain + ## HITS:1 COG:Rv1586c KEGG:ns NR:ns ## COG: Rv1586c COG1961 # Protein_GI_number: 15608724 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Mycobacterium tuberculosis H37Rv # 10 127 4 110 469 61 38.0 5e-10 MGHNKQEQTTEPLRAVVYVRISDDPEGSERGVDRQEVDCRAYAAAHGWEVAAVFRENDTS AFKQRTITLPSGERVRRVIRPQFRAMLKHLGTGEAQVMVAYDLDRAVRDPRDLEDLIDAK VLGGFTVRSVTGSLRLDV >gi|294972172|gb|ADNU01000018.1| GENE 100 94561 - 95469 429 302 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 23 298 1 259 263 142 35.0 9e-34 MGISRATASKWVTRYRKFGQLGLLDRSSAPIRQPSATPGETLARIEELRREHKWSASRIT FELHGDGVAISRRTVTRHLAELGLNRRRFIDPNGETNRQVQTITAKHPGHMVHLDVKKVG RIPNGGGWRAHGKGSPEARAAARARTRGARAGYAYLHSAIDGHTRLAYTESLENERATTA VSFLNRARVWFAAHGITRIERIITDNGACYRSAAFAAALNGAEHRRTKPYTPKHNGKVER YNRILAEEFLYARTWNSEDQREKALETWNLHYNYHRPHGVHDGKPPASATPLRVNNVLAS YI >gi|294972172|gb|ADNU01000018.1| GENE 101 95559 - 96734 814 391 aa, chain - ## HITS:1 COG:SMb20071 KEGG:ns NR:ns ## COG: SMb20071 COG2814 # Protein_GI_number: 16263819 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Sinorhizobium meliloti # 1 376 1 377 397 151 35.0 2e-36 MPFALYLLALVVFAMGTSEFMLAGLVPDISTYFGVPVGTAGLLTSAFAAGMVIGAPAMAA LTRRLPVKSTLLGCVTVFAAAHVVGALTPDFTVLFITRVIAAIVNAGFLAVALGAATKLV APNAKGRAVSILLAGTTVATVAGVPAGAVLGTALGWQSTFWAIALLCVPAAIGIAAGFTT QAGDTSEKDSSSLRMELAQLASPRLVLTMMLAALVNAGTFATLTFLAPIVTGTADLSQWW VSVALVLFGVGSFIGVTVAGRLADARPRVVIMGGGSVLVLGWVALALFATNPVALLGLVF AQGVLGFAVGSTLITRVLYAAAGAPTMAGSYATAALNVGAAVGPILAAAALGVIPGALGP VWVAVTTTAAALLLTIPLLRLIAPAESEVVK >gi|294972172|gb|ADNU01000018.1| GENE 102 96916 - 97425 415 169 aa, chain + ## HITS:1 COG:Cgl1432 KEGG:ns NR:ns ## COG: Cgl1432 COG0477 # Protein_GI_number: 19552682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 24 156 329 462 462 77 35.0 8e-15 MRPNLPVCAATPKKRQQPHGQQHLADIFGRKPPYFIGIVLTATWGFFAFPLYDTGQPLNI FIALVIGLLFHALMYSGQPAIMAEMFPTRMRNSGVSTGYQVTSIVAGSFAPIIATFLLRE FESSVPIAVYLLIACAISIVALVFTRETRGVDFAEIDAADRENREVRIG >gi|294972172|gb|ADNU01000018.1| GENE 103 97592 - 98476 659 294 aa, chain + ## HITS:1 COG:BMEI0218 KEGG:ns NR:ns ## COG: BMEI0218 COG0583 # Protein_GI_number: 17986502 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 4 283 12 295 308 132 36.0 1e-30 MISARSRIAPDDLLTLLTVARLGKYTAAAQVLGVNHTTVSRRIAALEKSVGEPVLASSPD GWEVTQAGEQLISAAEAVETALEEAGKVRGMSGVSGVVRIAAPEGFVDYGGFDRIMALQK AYPDVQIDLVTATQRASKYRSGVDIEIVVGEPSAPHSQLQRMGNYSLGLYVSQEYARERG VPETIEDLSQHRFVFYPEHSLGVEGLEGAPAEFPRPAGFFRSNSVRLHVAATRAGIGVGL LPDFASQGLVRVVSEFSAPMEYWAVVRNESARRQVVVEVVRALAHTRSAQVPPA >gi|294972172|gb|ADNU01000018.1| GENE 104 98547 - 99455 1001 302 aa, chain + ## HITS:1 COG:BMEI0688 KEGG:ns NR:ns ## COG: BMEI0688 COG2084 # Protein_GI_number: 17986971 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Brucella melitensis # 1 297 15 308 310 216 45.0 3e-56 MAVIGWIGLGRMGGPMTKNLIAAGHTVNGFDVVPAAVEAAAGHGVVAKSSIAEAVEGADI VFSMLPKGEHAKTVYLGEGGVFDNASTSTLLVDSSTIDFDTATELHQAARDRGFKFVDGP VSGGVSGAAAGTLTFMLGGDDVDVENAKTFIEPMAGNIFHAGGEGAGQAAKIVNNMLLAI SLQGVVEGAVLAQRFGLKPEVFYDIAKVSSGDSWPLRTWYPVPGVVDTAAANNNFEAGFS TMLMHKDVGLALDGAKTQGVTLSAAELVYSRLQQLIDDGNGDLDCSAIIGLVDENAEGLP QD >gi|294972172|gb|ADNU01000018.1| GENE 105 99471 - 100187 485 238 aa, chain - ## HITS:1 COG:aq_274 KEGG:ns NR:ns ## COG: aq_274 COG0325 # Protein_GI_number: 15605814 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Aquifex aeolicus # 16 237 6 226 228 142 40.0 6e-34 MSEPVSAHEAEQIRSKLDDVAERVRAASEASKHVDRVQILLATKTQPASKIRVALEHGFT LIGENRVQELNEKFDDLADIPHETHLIGPLQRNKVNHTLGQASCIQSIDSMKLATKIHNR LELLDQTVEAFVQVNTSREDTKSGVAPEQLGELLTEIAPLERIRLRGLMTIGLPGSTEAE VRPSYADLRNLRDTHLDSGLLPEHATELSMGMSNDFELAIAEGATMVRIGSSVFGARA >gi|294972172|gb|ADNU01000018.1| GENE 106 100184 - 101461 1313 425 aa, chain - ## HITS:1 COG:MT0081 KEGG:ns NR:ns ## COG: MT0081 COG1168 # Protein_GI_number: 15839454 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Mycobacterium tuberculosis CDC1551 # 3 394 6 385 390 236 37.0 5e-62 MSYDDITIDSLIEKGSFKWSAYPGTIGAWTAEMDFGVAPAIRATLEQLDASDLYGYSTPA LMRDMAQATAQFYNDTYGWDVNPEWVSPVSDVLTGMQAVLSFYTEPGAKLVLPTPAYMPF LTMPKIHGREIVEVPMLRNESGSGDAKPTWTMDFEAIDRALSTAGADGGSGGLLVLCNPH NPIGRVYTRGELEELSRIVEKHGARVFSDEIHAPLTFTGHTHVPYASINEAAANHTVTVT SHSKSFNTPGLKCAQIIFSNEADFAIWATHGMFTGKSAANPGLLAAVAAYRDSRDWLADT SAYLERNRDALPGLLERHLPQAVYEPPEGTYLAWIDLSAYDLGDDLTSFFVDRARVSIID GALCGEAGRGFIRLNMGTSLPILEEIVERLGAAVAGTPVAPVGSVAEVADGSEAGQAGDA GEGSA >gi|294972172|gb|ADNU01000018.1| GENE 107 101458 - 102303 683 281 aa, chain - ## HITS:1 COG:AGc22 KEGG:ns NR:ns ## COG: AGc22 COG0179 # Protein_GI_number: 15887373 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 273 1 273 280 199 43.0 4e-51 MELMRVGPRGQEIPVVRLNGRHYDVRPLTGDFNAEFWAHGMNTLTTAQVKDCQEINIDAR RIGAPVAQPGAIICIGTNYAAHAAEANLPTPTHPVVFLKTPNTVAGPYDELEPPRRFSQL DWEVELAVIIGRAAHNLDSPEQAREHIAAYTVANDLSERVFQTQESGGQWSKGKCFPGAL PLGPVAVSADVFDPTNARLTSHVNGEPRQDSSTADMVFDVFHLVYDLSQYMRLEPGYVIA TGTPQGVAMSGQYPYLESGDVVEVAIEGLGTQRTQIGIMAP >gi|294972172|gb|ADNU01000018.1| GENE 108 102376 - 102669 152 97 aa, chain - ## HITS:1 COG:no KEGG:KRH_05890 NR:ns ## KEGG: KRH_05890 # Name: moaD # Def: putative molybdopterin synthase small subunit MoaD # Organism: K.rhizophila # Pathway: not_defined # 11 97 3 87 87 76 58.0 3e-13 MSEGAQNQVSVRYFAAARAATGVEQEDVILDGQLSSGATREQFIELLVSLHPEVPAGEPP LSRVLPQCSFLVDGVALTDSTVAPGNRVDVLPPFAGG >gi|294972172|gb|ADNU01000018.1| GENE 109 102671 - 103813 696 380 aa, chain - ## HITS:1 COG:Cgl1171 KEGG:ns NR:ns ## COG: Cgl1171 COG2896 # Protein_GI_number: 19552421 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Corynebacterium glutamicum # 39 380 2 337 337 318 49.0 9e-87 MNVSLGMPSIRTESVADRASHTRDTLERRAHDAPTSGPLADTFGRTGTDLRVSLTDLCNL RCTYCMPASGMTFLPKEAVLTAAEVVRLVRVAVDVLGVRELRLTGGEPLLRRDLEHIVAS IRGNHPDLPIAMTTNAISLEKHLPTLHQAGLNRINVSLDTVDPATFAQLSRRTKFSEVMD GLNAALRLRDQTAGDSAPFGVKINSVLMRGVNDHQAVDLAQFGIDHGITVRFIEQMPLDA DHGWTRQNMVTAHDIATQLQQRWELQPRAGRGSAPAELFDLVDSCGVAGQVGIIASVTRP FCSACTRTRITAEGKIRSCLFSHEEFDLAALLRSGASDDQIAQAWRQAMWLKPKAHGMGE AGLDSDAYEQPNRSMSAIGG >gi|294972172|gb|ADNU01000018.1| GENE 110 103853 - 104848 749 331 aa, chain + ## HITS:1 COG:MT0888 KEGG:ns NR:ns ## COG: MT0888 COG0521 # Protein_GI_number: 15840278 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 6 155 5 154 160 115 45.0 9e-26 MRKNDAAYVLVVSSSVARGDATDTTGPELIEWLRGLGFATPDPVRVSDGHAVADALERIL RDAPAVVITTGGTGLTPDDVTPEMTARFVERRVPGIEQALIAQGLEHTPHAALSRGIAGV AGSTLVINLPGSRSAVRDAMVTLAPLVPHACEQIADVRTHGRGVDEAALDAPAQPEASGG APAELADQPATTSAVVATRITRDPCLTDAASTVVTPECGAVVEFSGVIRNHDSGRGGVVG LDYTCHPDAEEMLAQVVGEVAQAHPGTRVLCEHRVGSLQVGDVAIVVAVAAAHRKAAFDC CEDVVNQVKARVPIWKQQHYDTGGHDWVGLQ >gi|294972172|gb|ADNU01000018.1| GENE 111 104845 - 106050 780 401 aa, chain + ## HITS:1 COG:aq_1329 KEGG:ns NR:ns ## COG: aq_1329 COG0476 # Protein_GI_number: 15606532 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Aquifex aeolicus # 27 242 11 234 271 221 51.0 2e-57 MTEGVTHGLGGSRGLGDDRGQARVSGRYVRQLNVVGLTGQQALARARVLVVGAGGLGSPA AIYLASAGVGTLGLIDDDIVETSNLHRQPLHMTESVGEPKVESAAAHLTALNPDVHVVTH RERLTADNARQLLRDYDVVLDGADNFATRYVVSDACRDVGVPHVWAAVLTTGGQMSVFMP HGPTYRDLYPVAPSDVPTCAEAGVLGVVPGQLGVAQAAEALKLITGLGQPLVGQVGVYDM LTGMWEYVPLVGSGGAPQPETGSTRQSETHSVGVEEPGWFEPAEVVPAEIPAGAFVLDVR EESEFDSGHAPGARLLPLSTIMDNPEGSARALALEVEHTPDPHVYVMCQAGVRSQYAIQM FHSQPSVQHVRLTNVIGGMYGWMGAGLPVVQPAPGENETGN >gi|294972172|gb|ADNU01000018.1| GENE 112 106047 - 106706 236 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 211 7 231 245 95 30 1e-18 MTLHVAFSLPQRGVDIDVEVPLTGVTAVIGPNGAGKSTTFDVIAGLLSVRGATVQVGQRE FTSPAVPAHKRRIGYVMQDPHVFPHMNVEANVAFGLPRGEKARAVEELKRFHVDDLRARM PSTLSGGQAARVALARALAPRPELLLLDEPFVALDAPARTELRTHLRSLSTPVLLITHDR ADIELADHIVVLGDGHVVQVGTRAEVAAQPRGLATELVG >gi|294972172|gb|ADNU01000018.1| GENE 113 106703 - 107464 547 253 aa, chain - ## HITS:1 COG:Rv1858 KEGG:ns NR:ns ## COG: Rv1858 COG4149 # Protein_GI_number: 15608995 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Mycobacterium tuberculosis H37Rv # 1 215 11 226 264 174 57.0 2e-43 MWVPAVVAASFVAFPIVGLVVRADWPEFFSLITAPSALQALWLSLITATCATLLSVLLGI PLALLTVREFPGVRLLRTVVLLPLVLPPVVGGIALLATFGRAGLVGSSLEAAGVSIAFTT VAVVVAQTFVAMPFVVLTVEGALTSLDPGFARVATTLGAGPTRTLFRIVVPLIRPALISG AVLAFARALGEFGATVTFAGSLQGVTRTLPLEVYLLSDSGDTPGAVAVSVVLMVVAFVVV ATMYRKTSRGGRQ >gi|294972172|gb|ADNU01000018.1| GENE 114 107515 - 108258 562 247 aa, chain - ## HITS:1 COG:MT1905 KEGG:ns NR:ns ## COG: MT1905 COG0725 # Protein_GI_number: 15841325 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Mycobacterium tuberculosis CDC1551 # 29 247 40 261 261 171 49.0 1e-42 MMKPRAVAIALTLTCCALTSCDKADPGSSLTVFAAASLKKSFEEIGKDFEEETGTDVTFS FAGSSGLVEQMKSGAPAQVFASADEPTMDTASQAGLVQEPRIFASNTLTIAVPEGNPANI ASLETLTRPGVKVAVCAPAVPCGHATKQVLDVAGVSLAPATEESKVTAVLTKVESGQVDA GLVYVTDARASDKVEAVDFPQAAEVVNRYPIAVTSHGKKTASAAQFVEFVLSDRAQQVLH ANGFGQP >gi|294972172|gb|ADNU01000018.1| GENE 115 108304 - 108690 440 128 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_36020 NR:ns ## KEGG: Asphe3_36020 # Name: not_defined # Def: molybdenum-pterin binding domain protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 126 3 128 136 115 48.0 6e-25 MYRVSEAARFLDVSTDTVRRWIAAGALTHRTDSAGRTVVDGVELARHARKITALPEDPRH VSTSVSNRFYGIVTDVKRGDVMSLVEIQAGPHRIFSLVGTDEIDRMQLTPGNAVIASALA QAIALERI >gi|294972172|gb|ADNU01000018.1| GENE 116 108698 - 109246 489 182 aa, chain - ## HITS:1 COG:Cgl0212 KEGG:ns NR:ns ## COG: Cgl0212 COG0315 # Protein_GI_number: 19551462 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Corynebacterium glutamicum # 11 162 3 154 156 163 62.0 2e-40 MTGSSKRSAPQLSHVDESGAARMVDVGGKPVTARRAVASGTVITTPEVMELIASGNLPKG EALPIARIAGIMGAKRTWDLIPLCHPLDLSGIDVTFSLEHDRVHIQAVVKTSGKTGVEME ALTAVSLTALTIYDMIKAVDKHAVLTDIKVDAKSGGKSGDWSREAANHLGHTHPSLPQDS DD >gi|294972172|gb|ADNU01000018.1| GENE 117 109291 - 110688 689 465 aa, chain - ## HITS:1 COG:Cgl0213 KEGG:ns NR:ns ## COG: Cgl0213 COG0303 # Protein_GI_number: 19551463 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Corynebacterium glutamicum # 67 456 33 385 394 139 30.0 8e-33 MDMEGRALRRADWAARHALARVRHGPYSTDMVSIADYREKLFDILLLMSSWEYRDLAQVA THPMPLRAAQHVKSAEQVPRFNNSQMDGFVVHPNDPEVVAGKPVPLLPMAAAGHNPVPLT PGFAMPIMTGAKIPDWNGAAFDDDECDLCVVPVEETVAGFDDLTHVTFTPQATFESGRFV RYRGSDIDYDEELCAVGDHLTPARLGSLASVGLTQIAVFKPLRVLVVSTGDEVCQPGLRP GAAQIYDSNTSAAVAALSAAGAHVVGTLHAPDHPDLLLDAVRSWQADDTRRADVVVSMGG ISMGAREVIRLASELEVQQGVENWYGGAQSPRLPNSGMEFCRLPMQPGGPQAVGQLAEVP WVALPGNPVSTLVSIEVLLRTSLFGARPRNRMNVTVRTPGGDPLSSPMGKTQMRFARLDA DGSAQLAWSNSSHLLHRQVEATLLMIIPEDVTVIEDGDTFEALAL >gi|294972172|gb|ADNU01000018.1| GENE 118 110738 - 112654 1814 638 aa, chain + ## HITS:1 COG:alr1013_1 KEGG:ns NR:ns ## COG: alr1013_1 COG0526 # Protein_GI_number: 17228508 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Nostoc sp. PCC 7120 # 8 168 4 171 173 168 47.0 4e-41 MSNANRVKLRAPELVGRRWINTGGKNLSLEDLRGKIVLLDFWTFCCINCLHVLDELRPLE EKYADVLVTIGVHSPKFEFEREIEAVDRAVERYQVEHIVLDDPNLETWKAYTARAWPTLV VIDPEGYIVASMSGEGHTSGLISLIEEVAAEHEAKGTLRRGDAPYVPPAPREGDLFYPGK VVRLDDGRLIVADSGHHSYALYDSDGANLLGRIGSGERGNADGDFATAQFSEPGGVAQLP PEIAQQVGYHLVAADTVNHTLRGINLETQTVTTVAGTGEQYMVGASDNVPDQPGFFGRYD GPATAVKLSSPWDVVYAPKTSNVVIAMAGNHTMWTFDPVAGTVAHISGSLNEGLRDTSAA ATPFDLDEWFAQPSGVRLASDGNVWVADSETSALRKLDPSTGAVTSYVGVGLFDFGFQDG PAESARLQHPLGALELPDGTVAIADTYNGAIRRFDPQTNTVSTLARGLKEPSDILLMQGD DTTSGYLLVAESAAHQLTAVAIPEEALEVNEGAQQTKRPVTEIGPGPLDITVAFTVPAGQ KLDERWGDPTFLQVSSTPENLIVDGAGGKEGTQRTVTLNPEVASGVLHVTARAAACDGEP GGEIPLHAACHLYQQDWGIPVAVVADGPNDLALDLRGA >gi|294972172|gb|ADNU01000018.1| GENE 119 112659 - 113612 927 317 aa, chain - ## HITS:1 COG:no KEGG:RSal33209_2230 NR:ns ## KEGG: RSal33209_2230 # Name: not_defined # Def: hypothetical protein # Organism: R.salmoninarum # Pathway: not_defined # 14 311 33 336 342 103 24.0 1e-20 MKRKRPIALISTGLIVCVLTLVSVPVLNFTVHKPGRAVLTYFKALENHDTHRALSMLDIP SNTNLNGVTDDILSGAASVPRQAKVLDSTRVNDDAYNVKISYVQGSDTRETTFRVKRDER TFGTVQKWYIKLDQWPVITIDTGGVPTAQLNGVSVPAGETPVLFPVTYTVGFNSTYLRSD LQTVDVTEPDTTSAVHLTGKPTPELTKKVSEILKKQIDQCVKEKTLMPADCSFGKETTNQ ILGDVKWSVKSYPNVTLENGASGIEMAPANVELTVSGKQRDAVTAFESTFTDTVTARMRA QVRIEGNNVTVVQEEAE >gi|294972172|gb|ADNU01000018.1| GENE 120 113698 - 114717 929 339 aa, chain + ## HITS:1 COG:CC0882 KEGG:ns NR:ns ## COG: CC0882 COG1073 # Protein_GI_number: 16125135 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Caulobacter vibrioides # 52 317 32 302 323 68 25.0 2e-11 MKFLKWTGRIAGGVALTLVVCGGTVFGFRLYNKNKYPVTQASAGLQDKGAYPTNDRIQPI EGEYLNGFHFSPEKRSHEGTVVVYGGSEGSPSYEQAKALSEKGFEVLALYFFGQDNQKPS LAHVPLEQFDEVVEYAEESIENPTPITAIGTSKGAEFTANLAAHGYPVNNLINFTPAHFS YPGLDFSSQDEKPSFTHDGKPVPFASFRNGDAKMGMKLMWDMATAYPPEYRPTYENAAEH ADDQAQIDLSGFDGNALFLAGDQDKMWQGDVAAKALAEQSPSFESVIYPGAGHLFMEDIE SMGNGWQIMFGGTVEGNAKAAKESMELVTQKLSEWHGDK >gi|294972172|gb|ADNU01000018.1| GENE 121 114730 - 115764 651 344 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394957|ref|ZP_06805170.1| ## NR: gi|295394957|ref|ZP_06805170.1| ABC proline/glycine betaine transport system, ABC protein [Brevibacterium mcbrellneri ATCC 49030] ABC proline/glycine betaine transport system, ABC protein [Brevibacterium mcbrellneri ATCC 49030] # 1 344 1 344 344 643 100.0 0 MAISEGLPQDLSDLNRIVLMGQSEDADVASALLGERPYVTPAITPQPWSPRARVTRVIRD ACKTHASASHELDRAIDATCTLWGVTPRARVRDVDSRLLPLIAGFAHARATNASHVLLTD PLHGLTSSARTSLRNRILDTCKRLDLGLIMSTSSLTDAFVIGGWAIVVEKEQVADQGPIE AQLATPRSNLAAAHRRVNVFSGLARKGWLSIGHSQVRARTELDGKVFVTIPVNAVAMSFD EFDPVFTDETVFEALVTQVRDAGERVQVVLSPVDTEVGLAMTADLWDFSGQGQSSGSPVL HPALGDGVSEQATRVRAGSHVFVQVDTARMEAYPVEDAAPTAVK >gi|294972172|gb|ADNU01000018.1| GENE 122 115772 - 117268 1266 498 aa, chain - ## HITS:1 COG:no KEGG:YE2684 NR:ns ## KEGG: YE2684 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 194 266 809 875 904 73 60.0 2e-11 MKTLPSLVLAPAVAAAVTGMIAAPAVATSTSPEPQHDPTSDDASEASRQSSEIKVSVADT TVSVADITNADKGVTFKGENFKPNTTARVFVTGPNDQQYPANTELSVNDKGEVNGTYYFT VEEGAEVPLGQYSLALRSVQEEKTTDPATFNVTADGEEPAPEPTPEAPKETQTPKPEPTP TPTETPEPTPTPTETPEPTPTPEKTQTAEPTPTPTETPAPTPKETQTPKPEPTPTPTETP APTPEPTETPEPTPTPEKTQTPEAPVSDASLSISPSEISAEDFSDKNKGVNATVTGLKAG SKYTFKFEHSEGKTSAYEVTKTADDKGVATAGVAAGEGSKVHPGKYTVKVTGDELDKPLT GSFTVRPPKDDEAGDGGQSSEIDNSQDGQGDSPEGEQDNSEDSATPPTNEKSNDDANTTE SDESTDSGESKESTDTSRRPAEERAPRHGENATAPESSNDLPRTGTELTGLALGVGLIVV GGAAVVVTRRKASTDGTF >gi|294972172|gb|ADNU01000018.1| GENE 123 117443 - 118033 584 196 aa, chain + ## HITS:1 COG:MT0336 KEGG:ns NR:ns ## COG: MT0336 COG0717 # Protein_GI_number: 15839708 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Mycobacterium tuberculosis CDC1551 # 5 193 2 189 190 257 67.0 8e-69 MGVSLLSDRDIISQIEAGRIALDPFDPVLVQPASVDVCLDKSFRLFDNHKYSFIDPSVEQ PELTRLVEVETDQPFILHPGEFVLASTAEVVTLPTDIAARLEGKSSLGRLGLLTHSTAGF IDPGFSGHVTLELSNMATLPIKLWPGMKIGQLCFFNLSSPTNNPYGSNPATANRYQGQRG PTASRSFQNFYRSPSV >gi|294972172|gb|ADNU01000018.1| GENE 124 118030 - 118896 670 288 aa, chain + ## HITS:1 COG:no KEGG:Xcel_3188 NR:ns ## KEGG: Xcel_3188 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 36 285 70 371 371 75 30.0 3e-12 MTYTSAHVLIADAHTEPTDVFTLIRNVRPRIEVNTDAGRVQLSRHSHLEGPLALTEQDCV QLECERDSVVFALWGPTDREGTPPVGDGPLDAFFPHGLPIKEEERNIELLLALARRLHGS VRLAGDTSAARTVTPDPDQHAVYTVFSSYWLDPALCADTVRHVIPEVQSHEQFTLDASTI AADEPILLDGYSVTATLAAGPDYPAEVVVLVEDHLPPAVDQYAQAPLISYLVRWVTPESV GDPDVAPRVRAQVVDELERIAGALMRATAGIGIDADGFLVTESQLSGT >gi|294972172|gb|ADNU01000018.1| GENE 125 119009 - 122029 2356 1006 aa, chain + ## HITS:1 COG:Cgl2672_1 KEGG:ns NR:ns ## COG: Cgl2672_1 COG1009 # Protein_GI_number: 19553922 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Corynebacterium glutamicum # 16 512 16 531 532 366 45.0 1e-100 MGAILSAFLVAACFAPLLFRFLGRNAFLLLAAVPLTGLIFSIIQAPAVLAGRPPWELYDW LPVLDMSIIFRMDTLSWILTLMVTGVGTLVFLYCARYFNERDPGLGGFAANLTAFAGMMY GLVLADELLVLFMFWEGTTVFSYLLIGFSSTRQQSRRAALQALVVTTFGGLIMLVGMLIL SHEYGTGRISDITTRGYLEGNVVVAIAMFLILIGAISKSALVPFHFWLPGAMAAPTPVSA YLHAAAMVKAGIFLILRFAPSFYTMPGWVPVLVTVGIGTMLIGAWQALREFDLKLVLAYG TVSQLGFLTAVSAFGTRGVTVAALAMLVSHALFKSTLFLTVGIIDHAVGTRDLRKLSGYG KRDPWLAGVGILAAASMAGVPPLYGFVAKEAVIETILATQSKAGYIALAGIFLGSVMTVG YAWRFVYGAFATKENVEPVSGHSTSNLLMVSPAILTVSLTILGPLSFILNGPFEAYTQDL SGHAYSLALWHGFTPALAISGAIFAVGAVLIYAGPYVSQFQSHMPTIIDFPRAYSRIMQG LVATAAYVTSRTQRGSMPFYQSVIYGVAIGGMGVTLLANNSWGVLPEFAQSWGQVAVAAI TVPAALAATVAKKRFQAVVIVGVTGYGMVAFFAMQGAPDLALTQALVETITIVVFILVLR RLPVDMAGDPSKNFSPPIRAIIGASFGLLMMVGVVVAMGNRIHTPVSDVWGELAYNVGHG KNIVNVALVDIRAWDTMGELSVVVVAATGIASLIFVQSREQKLQRVKLPSHVTSGLGRFT VPVTDELTLKTADEKADETSSEQESKRNAWLMAGRTLDPRHRSIMLEVLVRLVFHAMLVL SVYLLFAGHNAPGGGFAAGLVAGLALTVRYLAGGRFELAEAAVFDAGRLLGLGLAVVIVT ALGGLLWGDAVLQSEYWSTTLPILGDLSFGTSTLFDIGVYFVVMGLMLDILRSLGAEVDR HQEADEQRLAEVLAEGDEQADKRKLSAIMGRIDSLRSRTGKRGDGL >gi|294972172|gb|ADNU01000018.1| GENE 126 122026 - 122526 484 166 aa, chain + ## HITS:1 COG:Cgl2673 KEGG:ns NR:ns ## COG: Cgl2673 COG1006 # Protein_GI_number: 19553923 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhC subunit # Organism: Corynebacterium glutamicum # 1 140 1 139 163 100 41.0 2e-21 MSTSLILLITMGVLMACGVYLMLDRSLTRVLIGFLLLGNGVNLLIMLTAGPPGNPPITDG VNLSTSGMSDPLPHALILTAIVITFGISAFMLALIYRSWRLVRAETIDDQGEDLAEAQEQ SLRLAEEAQTSESQDDTEFGDEADHPVPGAVDLDDDGTPEERGDST >gi|294972172|gb|ADNU01000018.1| GENE 127 122523 - 124100 1163 525 aa, chain + ## HITS:1 COG:Cgl2674 KEGG:ns NR:ns ## COG: Cgl2674 COG0651 # Protein_GI_number: 19553924 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Corynebacterium glutamicum # 4 518 15 530 566 441 48.0 1e-123 MTALVPLPVVLPLLGAGLTLLLLGKTRIQNFVTVLTIVITLCFEVAMVFYVDAHGTQVVA VGGWGIPFGISLVVDRLSAVMVVVSSIVTLCVLVYAISQEMADTNRESPVSVFNPAYLIL CAGVSNAFMAGDLFNFYVGFEMLLAASYVLLTLGATPGRIRAGATYIVVSLLSSIVFLAA IGLIYGATGTVNMAQLSQRIAELPSDVQLFLHVTLLIGFGIKAAVFPLSFWLPDSYPTAP APVTAVFAGLLTKVGIYAIIRTETLLFHESSMQVPLLVVSALTLIVGILGAVAQTEMKRM LSFTLISHIGYLLFGVAMGTVDSLSATVYYTVHHIIVQTALFLAVGLVEQRVGTTSTRKL GGLARLAPFMALLFFIPALNLGGIPPFSGFLGKIGLFTPAIAGGNWLEITVVIAGTLTSL LTLYVVTRTWSLAFWNDPADVESPTPELVTEFQRATSAIQKNERRPRGPRLPAMMVGATA AIVTVSCLLTLAAGPLWDFSQRAGENMRDPDNYVSTSLTTHVEER >gi|294972172|gb|ADNU01000018.1| GENE 128 124100 - 124699 271 199 aa, chain + ## HITS:1 COG:no KEGG:CMM_1090 NR:ns ## KEGG: CMM_1090 # Name: mnhE # Def: putative monovalent cation/H+ antiporter subunit E # Organism: C.michiganensis # Pathway: not_defined # 28 199 36 202 224 129 41.0 8e-29 MSKARELIRQFLLVVLLVAVWIFLWDTVTITHVVTGVIVAILTTRLFYLPPVELPARFNV FHFLYLLGWFIVSMIHGSLHVAWVAVRPKPVNPGSVIAVELHTRSDLLTTLVGQISGLIP GTFVTEIDRAHSVLYLHVLNCNTPETIEANLQQTRKIEILLIKAMGSPHDIEVMNDYLVS EGKEPILKSWSLSNRRRRS >gi|294972172|gb|ADNU01000018.1| GENE 129 124696 - 125097 538 133 aa, chain + ## HITS:1 COG:no KEGG:CMM_1091 NR:ns ## KEGG: CMM_1091 # Name: mnhF # Def: putative multisubunit Na+/H+ antiporter, NADH-quinone dehydrogenase # Organism: C.michiganensis # Pathway: not_defined # 13 93 11 91 91 70 44.0 2e-11 MIDSQVATYFGPVIGILFAVAAVTAVIKIIRGPAILDRVVGTDVLLATIMCGLGAYIAFS GRHDLLVVLLVFSLFGFVGSVSVSRYVSRTPTSELTDFAGGMAHDAVDADEFDHSESPHH ASARGADGKQVRL >gi|294972172|gb|ADNU01000018.1| GENE 130 125094 - 125495 278 133 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_37180 NR:ns ## KEGG: Asphe3_37180 # Name: not_defined # Def: multisubunit sodium/proton antiporter, MrpG subunit # Organism: A.phenanthrenivorans # Pathway: not_defined # 3 104 12 113 136 105 51.0 5e-22 MILDIVSCVLLMFSALLSIFAALGLLRFPDFLSRLHAGSKPQVLGLVLAMIAIAIQAPKF GVVTTLLLIVLFQMATTQVGTHMVGRAGYRTKHLRRSMLYQDQLAEAVAKADARDIAQRS PKSRDRGTEEAEG >gi|294972172|gb|ADNU01000018.1| GENE 131 125498 - 126229 639 243 aa, chain + ## HITS:1 COG:BS_phoP KEGG:ns NR:ns ## COG: BS_phoP COG0745 # Protein_GI_number: 16079963 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 10 234 5 233 240 152 38.0 6e-37 MSEEDTRPLVLVADDEPDVLGAVVPFLNRSGFRVISASDGKLALDEIRRHNPDACVLDVL MPGADGREVLRTLRREENWVPVVLLTQVGEAVERAMALEEGADDYINKPFDPHELVARVR AVLRRTRAGEPPLATASILTSTFGLKIDRVGRRAWLRDRELVITPKGFTLLEYLMVHKDE LIERSRLLEVLWGFDDAVGTRAVDSRVAELRRVLGEDATEPRWIATVQGRGYKFVADVTG SHE >gi|294972172|gb|ADNU01000018.1| GENE 132 126238 - 127653 952 471 aa, chain + ## HITS:1 COG:TM1654_2 KEGG:ns NR:ns ## COG: TM1654_2 COG0642 # Protein_GI_number: 15644402 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Thermotoga maritima # 59 286 46 269 272 116 31.0 1e-25 MGHFLVFEIQIWLFLLLLFLGLIALAAVVFFAWRWWKKREETIRAQAYEAAEVEAVANRN RMLIRLDHELKNPLTALRTSAANVRSLVQDEPLDRDATLESVKQLDVSSRRVARLLADLR KLADVESRHIDFQRIDMDRLVHQAVEDARTAPGAEDRMIVVTVARAPWKLPEVAGEEDLL LSAILNLLANAIKYSSDADVVELRANEQVIDNHRWVVIEVADTGAGIPVDEQAGVWEELS RGKHVRSVPGSGMGLALVRSIIQRHGGSVELYSQEGVGTSVRVILPVLAPDQSTHGVAQA VAGSRNVRAAKKAGEVLGTPRRTSKRRLQMIDGQLTDTNTGETFGTPNDPHPVIPDSQEP GAQGGFGPQGGAGVRGPHPGPQPGVPDAQPGQHLGPHPAAQPGAHPGAPEQYGSQGQQEW TQPSQHEFGHRPNPAQGPAHVEREYSNRTDPHFAPPMPSKPPQQRPNEEQQ >gi|294972172|gb|ADNU01000018.1| GENE 133 127650 - 128327 591 225 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394969|ref|ZP_06805182.1| ## NR: gi|295394969|ref|ZP_06805182.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 225 1 225 225 445 100.0 1e-123 MRKRIVTSALALTCATLLVGCGSVGVRVAEESGGPLKVGVSEQKGAAPGPEPTEDPVPEG FKKVTLPGECPFETTMVIPNEYKMNGPIGGMTIFSDGSASRDKSVVVTCRNTFYKSLTEA RDKYLDYALSEPDSDMLLQNRYEIGEAAAGVFQAKLAQGEAYAPNKDMQMVATVYAGYAD GAAWELRIHATSPWGDEPVAKKQQTILDHITVDGQKLKTLKWEDM >gi|294972172|gb|ADNU01000018.1| GENE 134 128340 - 128729 439 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394970|ref|ZP_06805183.1| ## NR: gi|295394970|ref|ZP_06805183.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 129 1 129 129 197 100.0 2e-49 MDALMLINVTDSQSQVLSKAIVAGGIVVEAFTGDREPRSVTDEDFDTLVVHSDVPDVFDG VDDLAPGLESMGVDRVIFVGDSADEAIDQTATAAIVLGFDAVIVTESSEHVQQAVESGAQ VSTDVWLRM >gi|294972172|gb|ADNU01000018.1| GENE 135 128810 - 129376 428 188 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295394971|ref|ZP_06805184.1| ## NR: gi|295394971|ref|ZP_06805184.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 10 188 1 179 179 216 100.0 6e-55 MNQTRIARAMVAAAVATIVAWAFHSSSGGSSSALSLAVTFVVTLWLSVLLAGRAWGTVAL TCIVGVAQFAMHWLMSFIPTHSSGTGAIIESSHLFHDHAVTASHHLGGGSAMLVAHIFAT VVTVAIVRWGEKLLVALAAEVAGTALSYVSWARPVVTVAGATVATEVAVLRAQASAYELQ PRAPPVSV >gi|294972172|gb|ADNU01000018.1| GENE 136 129462 - 130094 637 210 aa, chain + ## HITS:1 COG:Cgl1633 KEGG:ns NR:ns ## COG: Cgl1633 COG2847 # Protein_GI_number: 19552883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 60 180 64 182 182 64 36.0 1e-10 MNLKKFSLIPAAVVAGAALALTGCGSSQPTDNASAGAQEEANASPVETKDMWIKAAKDGM TGAFGTVTNTSDEDLTITGGKSDHADIVEMHETVSDGAGGMQMKRKEDGFTIKPGESKTF EPGGDHIMLMKMTKAIEPGEKITITVSSSQGDIPLEFTAKEFTGAQEEYAPGDHEGHGDH ADHGGHEGHSDHSGHSEHEGHGEGDDKHNG >gi|294972172|gb|ADNU01000018.1| GENE 137 130087 - 131355 994 422 aa, chain + ## HITS:1 COG:Cgl1632 KEGG:ns NR:ns ## COG: Cgl1632 COG2837 # Protein_GI_number: 19552882 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Corynebacterium glutamicum # 58 409 3 343 361 261 40.0 2e-69 MANQPTPNRRTLMGATVVGAVGVAGAVGFGTGRSTAKAEPQRPRPDTTGLNGEETVPFYG EHQAGVETPPQAHGMFISLKLRDDVKREGVRRLLTLLSDDAAALTQGKPPLADTEPEMTA RPARLTVTFGFGRGLVERVRSAPDWLKPLPRFDFDRFQPGRTDGDLLLQVCSDDPSTVAH AVRMLMKDARAFTDVAWTREGFRRAYGSDPQGTTVRNPFGQVDGTANPGPGSEDFARLVW GTTTGATPAVFSPRGEPPRDLADHYPEWLRGGTTLVIRDIEMNMATWDQADRPAREFSVG RDMATGAPLTGTNEHDIPDLEAKNELGLTVISPVSHVARSRNTKDPAEQIYRRVYSYQEG LGATGLIFASYQANIDRQFLPIQERLAQADLLNEWTSPVGSTVWAIPPGASEGGFVGETL FM >gi|294972172|gb|ADNU01000018.1| GENE 138 131413 - 132270 497 285 aa, chain + ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 97 283 74 248 252 100 36.0 3e-21 MKPLPFCSRMPAIISSVTCTSVNDIHGVGDEWLTPGPTSPDVVEWRVDPLVSALTTGSAA GGGAASGGLTRRDSDLGGGDLGGKIAEVATALCERAQLPLIFTVRSEAEGGQCAEAAYTS AVEALTQCAETSGAAVASAGTDGATDVEIALDVEVARPDSRSLIEKARAQGTHVIASFHD FSATPHDLLERMRTMERAGASVAKIAVTPASMDDVIRVLDVTNRAQDALNIPVIAIAMGR MGAVTRLMGSEFGSCATFATGPQGASAPGQYSVAQVRQLAQVLKA >gi|294972172|gb|ADNU01000018.1| GENE 139 132282 - 132578 435 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394975|ref|ZP_06805188.1| ## NR: gi|295394975|ref|ZP_06805188.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 98 1 98 98 147 100.0 2e-34 MGKLAYQLLGVGGGALAALAARKALQVVWEKTMDRPTPNQDTDDDSTLAEALAWTIVSGV GVAVAQLVVQRYAVQTVRNNFGESALPKKLRKKNEEEA >gi|294972172|gb|ADNU01000018.1| GENE 140 132630 - 133529 807 299 aa, chain - ## HITS:1 COG:MT0833 KEGG:ns NR:ns ## COG: MT0833 COG0115 # Protein_GI_number: 15840224 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Mycobacterium tuberculosis CDC1551 # 3 262 2 260 295 163 38.0 4e-40 MTVRNTAALINVEANNFTLSDPSQLLLSLDDLAAHRGDGIFETVLVTYRDDATYIHNQAL HFQRFIESARMLELPSPDPKLWEEALHATAKQYKELNPDAHTVSIRYTLSRGHDSDTTAH TPHGWVVTAPVPRPEPTEITVITLNSGLDSSIAESAPWLLRGAKTLSYATNQAAKRYALS NGADDALFHTTDGYALEGPNSTLILRMGDQLITPDPKIGILHGTTQRCIFENASSQGLLT QYSNVTLDDLGNAQGAWLVSSVRGCRPISTILSSTSGPATHIPVDHDLTEHMLQWVLSS >gi|294972172|gb|ADNU01000018.1| GENE 141 133768 - 139260 5247 1830 aa, chain + ## HITS:1 COG:no KEGG:REQ_27490 NR:ns ## KEGG: REQ_27490 # Name: not_defined # Def: membrane protein # Organism: R.equi # Pathway: not_defined # 1227 1766 499 990 1571 146 28.0 8e-33 MRTQMCYSLFKRMTAILAVLALLCGMTVLLAQPAAASEELGDPGDPQAVEIGDSRVQYSL TLAKDGGTGCLITKGNGYETGDNTATDGNICAGDIAHYNVNLNVKTAGDPVTFTVTPTWL SAEARAAGLPEPTVKPTLKSGSASYAGVSATVDAQGAITVKADAGTNATVALELTASTIQ SLELRGGQNPEGTFNLGLKAAKEDGSPLTTAVADKKLNVLVEPRFDQMIEDPQSGVSTTT RNGVEYIGISARSGLPAYPSDQKHSPAPSGATPKGRILPIDPETISRYTLVMPENAPFKA DEVLVSYAGGDWQKAKVDSNGNPYVDGKYEKSNPPFRFLIPTQGLPSGKTDFTTRMDIVD KDGKPARVKDSRGVPSNIPTAKGNKALGDNTADPGGLSECSASTADAKQGLLAGKFGFPN NNCAKQTVDLTKWKCTHPGGCPSAKYDVGVNWVETEEKGKQAFNFKQALKAANVRMEVTP VDVKNNPTICSVWQPGVQRVASTASNIYVPTVQIGNQGRQDIQDVFPDAKVYITKADKTN GGQNPDCSGDADWEVFYDASAKVTGNTFAKPGKMNPNEIAGIKIVIPGENVIQRPITFRY VATTGAPSAVAEQDTVKAKEGDEEYYKTTNFSQFFEGDKKKRDSKDVILAEKPSAGVRDI WGDIGEKRVGGIGVQKQEIITAGQVVVNNGTSIAVNSKDVNGDPTRVHMRVYLSKCITAD EDSLSPGMTYHKGQISNDPKDCAPSTDNYIERTWALSDQKNETGDPKNDPFFPIGWADKN ADKSSDFYQPWDNGQPKPKFTVKTPAWSGPGQTFDIVHSYRITGTPEIKLDEAVKALKED TSIKAVTSSANEDAYTGAGDKAKDYTPLDSRAALTTLTVPNVVTVGLQKDVKDKLVDHDT QFQHSLKLTNYTEAQLGQTQFIDVLPFNGDWRDTKFSGEYWLKSVPEYVGSSGVDGRQIY YTNDDPNTVSVCPTNAEGRGDLKACENAAKATKRDVDEKPSNTKWELLTEEVIEAQAKPG AKHITALRFDSPLVKADSDDAYLLDFQSHGNKHGDKYVNSTGVSTLHATLGDSAETTGVG ALPIPQPDPVKTEVYAAKVSGTVYHDENRDEKQQDGEKNLSGYTVTLYEVDENGEIKKDD NGEPVVAGTTKSDKDGNYTFESVKRGNYRVVVSPLEETDINTEAGKGEAGSWNGKVITVT EPKPEDYDASKPQAHTKYDFGVFKPAPKISLKKTVNGKETAEVVADGKAEFVLAGENNGN VDLDNVKLADTWVEGKEPVDLECTITPKGGGDYDGNATEDLKEGNAKLAVGDAYECTGTY TVTQDDVDEQVTLPNDAEVTGKYLYKSATTGEDKDIPVEDKSKATVTVPQAKPALDVTKA VDGQKSVQKKAGEKAEWSITGKNTGNVTLHNVKLDDKWTGGDIELTCKQGEEEIDVLEGG ATLAVGAEFTCTGESDITQDHVDGEEPLPNNVTLTGNTKKDPDAGTKVGAQDTATVTVPK SEPSLSLEKTVTNWADNVEPFSTGGTAANRATGPEPLTVGDTVKYQFILTNNGNVTLKNV KINDPKVEDIDCGVDNITLAPGESIECTASHVLTAADVEGQTEYVNTANAEGDDPKGKKV KSNEPSAKVEVATPKIELEKKVKNKKASYRVGDAVVYTFVVANSGKLTVNNVKVEDSMLE KADVDVTCEVSTLAPGEKTTCESGEYTVTEADAKAGEVVNTAVAVGTSRGNGEDDGTPVR SNESSAVITVDKSEEPTEPGTEEPTEPGTEEPDVPGTDGPGKPDQPDQPGNAKKPEWLPR TGTEVTAAVLAGLALVVAGGVLTFGARRKR Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:05:33 2011 Seq name: gi|294972137|gb|ADNU01000019.1| Brevibacterium mcbrellneri ATCC 49030 contig00021, whole genome shotgun sequence Length of sequence - 36896 bp Number of predicted genes - 35, with homology - 34 Number of transcription units - 11, operones - 7 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 5 - 77 81.3 # Ala GGC 0 0 1 1 Op 1 . + CDS 170 - 1120 1023 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 2 1 Op 2 . + CDS 1122 - 1403 352 ## COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides + Term 1515 - 1546 -0.8 - Term 1399 - 1430 0.0 3 2 Op 1 . - CDS 1446 - 1901 518 ## jk1991 putative monovalent cation/H+ antiporter subunit G 4 2 Op 2 . - CDS 1907 - 2167 333 ## gi|295394982|ref|ZP_06805194.1| monovalent cation/proton (H+) antiporter subunit F 5 2 Op 3 . - CDS 2164 - 2586 373 ## Ndas_1732 cation antiporter 6 2 Op 4 21/0.000 - CDS 2586 - 4112 1385 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 7 2 Op 5 6/0.000 - CDS 4109 - 4441 258 ## COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit 8 2 Op 6 . - CDS 4438 - 7515 2583 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit - Term 7529 - 7566 0.3 9 2 Op 7 . - CDS 7605 - 8750 563 ## CMS_0828 putative glycosyl transferase 10 2 Op 8 6/0.000 - CDS 8747 - 9358 503 ## COG0406 Fructose-2,6-bisphosphatase 11 2 Op 9 . - CDS 9366 - 9776 352 ## COG0799 Uncharacterized homolog of plant Iojap protein 12 2 Op 10 . - CDS 9789 - 10958 910 ## gi|295394990|ref|ZP_06805202.1| conserved hypothetical protein 13 2 Op 11 . - CDS 10951 - 11526 487 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 14 2 Op 12 . - CDS 11558 - 11713 176 ## gi|295394992|ref|ZP_06805204.1| conserved hypothetical protein 15 2 Op 13 22/0.000 - CDS 11792 - 13075 885 ## COG0014 Gamma-glutamyl phosphate reductase 16 2 Op 14 7/0.000 - CDS 13072 - 14217 806 ## COG0263 Glutamate 5-kinase 17 2 Op 15 14/0.000 - CDS 14217 - 15746 1239 ## COG0536 Predicted GTPase - Term 15764 - 15809 12.2 18 3 Op 1 32/0.000 - CDS 15825 - 16076 378 ## PROTEIN SUPPORTED gi|50954530|ref|YP_061818.1| 50S ribosomal protein L27 19 3 Op 2 . - CDS 16095 - 16403 407 ## PROTEIN SUPPORTED gi|62423858|ref|ZP_00379013.1| COG0261: Ribosomal protein L21 20 4 Tu 1 . + CDS 16446 - 16682 70 ## 21 5 Tu 1 . - CDS 16554 - 16865 365 ## COG1605 Chorismate mutase - Term 16878 - 16922 11.1 22 6 Op 1 . - CDS 16939 - 18489 660 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Term 18613 - 18658 13.4 23 6 Op 2 . - CDS 18681 - 21293 2445 ## COG1530 Ribonucleases G and E 24 7 Tu 1 . + CDS 21615 - 22280 584 ## COG4243 Predicted membrane protein + Term 22309 - 22351 10.2 - Term 22297 - 22339 14.0 25 8 Op 1 . - CDS 22364 - 22780 469 ## COG0105 Nucleoside diphosphate kinase 26 8 Op 2 . - CDS 22822 - 23235 444 ## Ksed_09170 hypothetical protein 27 8 Op 3 . - CDS 23238 - 24599 1194 ## COG0285 Folylpolyglutamate synthase 28 8 Op 4 . - CDS 24599 - 27898 3173 ## COG0060 Isoleucyl-tRNA synthetase 29 9 Op 1 . + CDS 28235 - 28993 871 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 30 9 Op 2 . + CDS 29036 - 31681 2560 ## COG0525 Valyl-tRNA synthetase 31 9 Op 3 . + CDS 31696 - 32367 487 ## COG2013 Uncharacterized conserved protein + Term 32389 - 32420 3.2 32 10 Tu 1 24/0.000 - CDS 32386 - 33645 1208 ## COG1219 ATP-dependent protease Clp, ATPase subunit - Prom 33746 - 33805 2.2 - Term 33768 - 33831 12.2 33 11 Op 1 5/0.000 - CDS 33845 - 34492 660 ## COG0740 Protease subunit of ATP-dependent Clp proteases 34 11 Op 2 29/0.000 - CDS 34505 - 35116 726 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 35205 - 35264 2.0 - Term 35226 - 35274 11.2 35 11 Op 3 . - CDS 35290 - 36672 1595 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Predicted protein(s) >gi|294972137|gb|ADNU01000019.1| GENE 1 170 - 1120 1023 316 aa, chain + ## HITS:1 COG:BMEII0218_2 KEGG:ns NR:ns ## COG: BMEII0218_2 COG0596 # Protein_GI_number: 17988562 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Brucella melitensis # 43 282 5 226 244 66 27.0 7e-11 MDFIDSVATTFYIPVEAGTLTTSAWLYPPSYVETTSATSSHRPILFIHGFRGDHHGMALI AHNLRTHEALVPDLPGFGQTPPLPTTTLDSYTKFIDELYAQATNRFGTEPVLAGHSFGSI LAAHWAANNPTIPGLVLMNPITISPRDSAGKIATKITELYYHLGRDLPTHLGRSLLSNWL IVRAMSMTMATTNDPGLRKYIHEQHHRYFSTFSDPQTLSEAFDVSMSASVAEVSARLTMP VLVIAGKRDFIVPIQSTNRFIDTLPNARARVFNGVGHLVHYEAAEATAREIEDFAHDLSD TQDSHDPAHYTQLERT >gi|294972137|gb|ADNU01000019.1| GENE 2 1122 - 1403 352 93 aa, chain + ## HITS:1 COG:Cgl2935 KEGG:ns NR:ns ## COG: Cgl2935 COG2329 # Protein_GI_number: 19554185 # Func_class: R General function prediction only # Function: Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides # Organism: Corynebacterium glutamicum # 1 91 1 100 107 90 47.0 6e-19 MALVKINQLSVPEGQGEELEARFAARKKSVDQEPGFLGFELLRPTGDNTDYFVVTRWENE ESFQNWVAKRHPRNPNETVSAAKGMLEFEVVDL >gi|294972137|gb|ADNU01000019.1| GENE 3 1446 - 1901 518 151 aa, chain - ## HITS:1 COG:no KEGG:jk1991 NR:ns ## KEGG: jk1991 # Name: mnhG # Def: putative monovalent cation/H+ antiporter subunit G # Organism: C.jeikeium # Pathway: not_defined # 4 94 21 111 133 61 37.0 9e-09 MDILFTVLVGVFGIGGCLIVLGSSIAMFRARDALSRINVFSPVTGLGMPMILVAAYVHSL WAEGFSVWRTFAAVVAFLALIAVSSVASNVLSRATFVSGSPVSRATVPNRLAYAKDPDED SKLAAQAYREAKQAEREGKAKPHRDFYGEWR >gi|294972137|gb|ADNU01000019.1| GENE 4 1907 - 2167 333 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394982|ref|ZP_06805194.1| ## NR: gi|295394982|ref|ZP_06805194.1| monovalent cation/proton (H+) antiporter subunit F [Brevibacterium mcbrellneri ATCC 49030] monovalent cation/proton (H+) antiporter subunit F [Brevibacterium mcbrellneri ATCC 49030] # 1 86 1 86 86 101 100.0 2e-20 MTIILWTCIAILVVSIVLGLVRALTAPESGSRAVVGDLVYFSAVGILAFIGMLVNISIVI DVFFLSSLLGILATVALSRILTRGHR >gi|294972137|gb|ADNU01000019.1| GENE 5 2164 - 2586 373 140 aa, chain - ## HITS:1 COG:no KEGG:Ndas_1732 NR:ns ## KEGG: Ndas_1732 # Name: not_defined # Def: cation antiporter # Organism: N.dassonvillei # Pathway: not_defined # 4 116 5 118 125 77 38.0 1e-13 MIALRSIGYLAWLGKEIVSGTLDIIFNLFKTGDYGKPMIVEVPMRCVTDIEITLYASSIT ITPGTLVVATGPGTATAPPTLFVHCLFSESEEDALEGLFDMESRLLHTLRGRAPGEIPES AGLAHTDDSESKQQTTEEDS >gi|294972137|gb|ADNU01000019.1| GENE 6 2586 - 4112 1385 508 aa, chain - ## HITS:1 COG:Cgl0268 KEGG:ns NR:ns ## COG: Cgl0268 COG0651 # Protein_GI_number: 19551518 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Corynebacterium glutamicum # 5 507 6 495 510 353 45.0 6e-97 MNGSLLLLFIVVPLAASAITTFVRSRTINLFFLLGVPLATCVAGMYLIGVTADGRTISHS VGGYVHGLAIPFVADTFTAVMLVITSLAVVASCAFLRTTGEDQYRFVPTLILLMLTGVNG AMLTGDLFNFFVFIEVMVLPSYALIAVTGTWRRLGVGRMFVIVNLLTSTLLVIGVGFIYA ATGTVNIAVLADQSRLGNVSPQAALAVGIVVLALLIKAGAAPVHGWLVRSYPNTSAGMMS LFASTHSKVAIYGIYRVYVSVFGGHPRWEDVLLIIVVLTIAVGAFSGFGEIRVRNIFAFQ MTAGVGHILIGVAVLTTAAVSAGIFYMVHHIVTMSGLLLTIGAIEQTYGTGAFKKLSGLI RRERVASVLMIIGLFSLIGLPPTSGLWGKMGLVRALMEHVTPGTIAVVVMVIVASIVSLL VLQRLWKNTFWGEDMIQYHPDSPATGRAPATDLTDDVRVRWPLLVPGAFMIAVSVAMFVG GQAIMPVIQDAADALLNVDPYVKEVLGR >gi|294972137|gb|ADNU01000019.1| GENE 7 4109 - 4441 258 110 aa, chain - ## HITS:1 COG:Cgl0269 KEGG:ns NR:ns ## COG: Cgl0269 COG1006 # Protein_GI_number: 19551519 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhC subunit # Organism: Corynebacterium glutamicum # 1 101 1 101 127 118 61.0 2e-27 MIIAITVGVLVSGGVYLMLQRSMVRTIFGLALISHAANFALLLSGVPAWRGEPIAGRSPV SEAADPLPQAFVLTAIVITLAVTIFMLALAVLGHDDDQDRIPETGERRTQ >gi|294972137|gb|ADNU01000019.1| GENE 8 4438 - 7515 2583 1025 aa, chain - ## HITS:1 COG:Cgl0270_1 KEGG:ns NR:ns ## COG: Cgl0270_1 COG1009 # Protein_GI_number: 19551520 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Corynebacterium glutamicum # 1 524 1 520 520 332 44.0 2e-90 MAISATLGLLALIILVTPVLCRLVGRSSGWFLGLGYLGAAAFFMPAAVAAVHDGSAFPTA QEAVWTLEWMPSFDVNLAFAVDGVGAIFTLIALVIGAFVLFYSTRYLSRGPNYSFYLLMA TFTFAMVGLVLTDNLFVLFVCWEITSIASFMLIARSGRAAEGASLRTMFMTFIGGVLLLV AVSAMYGMVGSASIRDVLTSSVWQEKPGFTVAMALLVAIAAMTKSAQFPFQSWLPDAMAA ITPVSAYLHAAAVVKAGIFLLFRFSPAFSDVLAWNVLLVSAGIVTAWIGGWCALTQNDLK KLMAYSTVSQLGLIVAAVGVGTEFALTAGLVHVISHAMFKSGLFMMVGVVDHLGHTRTFG EIPRLIKVAPVSFAITAIGAASMAGIPPLMGFVSKEMLLTAVSSAGGEGHVLGWIALVLV AGASVLTISYCIKIVFGAFIDGPEVAPEKLGHNDFVMVTFAALPIVLSVPLAFALGVIEP GVAAGTSAAQGETAHHVHLAMFHGITPELIASFIIIACGVLVALNRARVWEFFNRVAIPF TGADVIDRIVAGLERVGKALVSVVASERASRHVAMNLGFLAVVIFGSAIAIYTGPGLPNF VPNLNRPIDYALLVVITFATLVVCLSRSRLTAVIGLSAVGIMATVQIMALGAPDVTLTQL LVETMTIIVFMLILQKLPRTFWKYSAKLQVMRGIFAIAVGSSVALAVWMLSGRRARSDIA MYYLTKAPEISGGDNIVNTILVEFRALDTQGELAVLGMAGIAIVAVFSSVRDRYIDPPAS EVPEMPRRPWLAIRPRGSTAFAAVTEAWPNVIAMQLMVKVVAPFLAIGSLLIFWRGHNEP GGGFIAALVGSAIAGLLYMATSKDRAIGPPRLPILLIGGGVLVAVLTGLVGLIVKGSFLE PIHGYILGQHFTSSMAFDVGVYMAVVGMLLVSFNLLGTSDSAFTPAGDDVLVDGLMMRDV GDIERTRERTDEMLYGELRGPLETMRGAKPKAHEFLEAEKPEDKKRVGLRTKHIAYGDQP KERGE >gi|294972137|gb|ADNU01000019.1| GENE 9 7605 - 8750 563 381 aa, chain - ## HITS:1 COG:no KEGG:CMS_0828 NR:ns ## KEGG: CMS_0828 # Name: not_defined # Def: putative glycosyl transferase # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 8 372 2 374 390 229 43.0 1e-58 MKLAVVCDYSLRYTGGAQTALMAQIRAWSQQFPVVVIVPDFPRTHFPGVTVVRPPRGVRS LELPVVRANSVLHAWMHRTLKQHRVEAVMVHSEFGLAATAVAQAQRLGIPSLHTVHTFFW RAPLVTQPFAPVARVFHQLVTGLEQPRLRLADRPLDSALRGMTLALAKQADAVISPSAHQ AERLRDAGLANVSVVSNVAEVAPGGRPLQPEVPLRLLWIGRFAPEKRLDVALEAVRLARR RGAQVELTVAGGERPRGVNDSFIHFVGAVPHEQVVSLIDEAHATLLTSYGFDNQPMVILE SAARGRPTFVCDPVLGAEFGNAVVECAGSEASDLADTIVACAQNPGVLVDAGREASLLAR QSSPQAHVKNLQGVIAGIRMR >gi|294972137|gb|ADNU01000019.1| GENE 10 8747 - 9358 503 203 aa, chain - ## HITS:1 COG:DR1097 KEGG:ns NR:ns ## COG: DR1097 COG0406 # Protein_GI_number: 15806117 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Deinococcus radiodurans # 5 171 23 190 232 127 44.0 1e-29 MARELYLIRHGRTAFNKEGRFQGQIDVPLDETGEQQAHALAITLQNSGITRIFASDLTRA RATAQALATATGLTVTLVEGLREISVGDWEGFTRDEIDQKWPDLLAKWKSGEDVRPPGGE SRLESSQRVYDSVHRLLKTCDDNDVVAMVAHGAVIRGATELMMGLSSETDYARLGVLDNC EYVHFVQRNDAWMLRRFAGGACA >gi|294972137|gb|ADNU01000019.1| GENE 11 9366 - 9776 352 136 aa, chain - ## HITS:1 COG:MT2493 KEGG:ns NR:ns ## COG: MT2493 COG0799 # Protein_GI_number: 15841939 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 117 1 116 126 113 59.0 1e-25 MPATDETIAYARSAAKGALQKFATDVVIVDVSEQLVITDAFVIASASNARQVDAIVDGVE ETLLKEHNLKPKSREGRGEGTWVLLDYSDIVVHVFNRDDREFYGLDRLWKDSPVISVPEI DKQETENNNTDSAHHE >gi|294972137|gb|ADNU01000019.1| GENE 12 9789 - 10958 910 389 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394990|ref|ZP_06805202.1| ## NR: gi|295394990|ref|ZP_06805202.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 389 1 389 389 492 100.0 1e-137 MAEQYMSRRERREAEKRAAEAQKLNDAAESPAAEETVPASTTTAKSPTPPQVQPEAGQQQ VEEELTPAEPPMFASRAERKAWMRKHGQAPEISDDSDLTLRYQSEQEPTSAPTETETKKA EDKEPEAKKPAVQEVAYKEPEHKLVDKKLEAKEPELKKPVLAKPMTQLGATQSVATAPAE INPVEKQAEQKKPAEEKATSEEHAGSKPSATKTDQAQYATKTSTGDKSAGKDDKTSSDTE PGGAQAAPPRSRKSPIVKPPNAEGIRVISGAVPVVSTESQKEPESQTSTKAPHTDKPQYS VYTDDERSRAASCVTRPLESVEEEPEVTRDEWPPHDDIGVAQPMSARSVTHQDGEILAGE RSLVLPYIVLGIGGVCAIVLVIVALIMLF >gi|294972137|gb|ADNU01000019.1| GENE 13 10951 - 11526 487 191 aa, chain - ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 1 189 14 204 218 263 67.0 1e-70 MGGTFDPIHHGHLVAASEVAAKFDLDEVVFVPTGRPWQKSDREVSHAEHRYLMTVIATAS NPQFTVSRVDVDRPGATYTIDTLRDLVQIYGHETELFFITGADALAQILSWKDVDELFSL AHFVGVSRPGHDLTRKGLPEHRLSLMHIPALAISSTDCRDRVENYMPVWYLVPDGVVQYI NKHNLYRSENG >gi|294972137|gb|ADNU01000019.1| GENE 14 11558 - 11713 176 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295394992|ref|ZP_06805204.1| ## NR: gi|295394992|ref|ZP_06805204.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 51 1 51 51 82 100.0 1e-14 MTSALVVLAQETHETVVDLPMHPIWYGVIAFSILMLLGIITLSWKGISHRH >gi|294972137|gb|ADNU01000019.1| GENE 15 11792 - 13075 885 427 aa, chain - ## HITS:1 COG:lin1227 KEGG:ns NR:ns ## COG: lin1227 COG0014 # Protein_GI_number: 16800296 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Listeria innocua # 18 427 9 415 415 385 48.0 1e-106 MTEDVNPKISRAVTRVVAGAKDASAVLSVSSTAERHAALEQIALTLENNVEQILEANNED IEKAREKGTDEGLIDRLRLTDERVRSIAQAVRDVVSLPDPVGEIVEGRRLPNGIHLTQMR VPMGVIGAIYEARPNVTVDIAVLALKSGNASVLRGGSLAQSSNTVLISLLRDALVTAGLP ENSINGIDKWGREGARVLMNAREYVDLLIPRGGSELIQTVVMNSTVPVIETGVGNVHMFI DASATVRTTTKLVVNSKAQRPSVCNALETLLVHEKAARRVLPRILEGLNDANVVIHGDPT VAEYAPDGVKVQRATRKDWNKEYLDLEIAIKVVEDIEAAIEHIREYSSGHTDVIVTNDLS NAELFVSTIDSASVGVNVSTRFTDGGAFGLGAEVGISTQKLHARGPMGLTQLTTTKWVMH GSGQVRS >gi|294972137|gb|ADNU01000019.1| GENE 16 13072 - 14217 806 381 aa, chain - ## HITS:1 COG:MT2515 KEGG:ns NR:ns ## COG: MT2515 COG0263 # Protein_GI_number: 15841961 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Mycobacterium tuberculosis CDC1551 # 8 371 6 366 376 251 45.0 1e-66 MSIYEETREAIAGATRVVVKVGSSSLTTPTGLNTDALEKVARTLAEFRLNGKEVILVSSG AIAAGMGPMEAVTRPKDLATQQAAAGIGQGILMSAYFKVLAEYGLVPAQVLLTADELIRR TQYRNAQRAIDRMLALGFMPIVNENDAVATSEIRFGDNDRLSALVAQLSHADALVLLTDV DALYTAHPADPDSRRVEFVSHPSEIQQLSIGGAGSSVGTGGMRTKILAATMVTDSGIPTL VTSADNCAAALRGEDVGTYFAVTHKRRQTRMLWLAHLASTNGTIRIDAGAAKAVLKRGTS LLAAGVTHVTGEFESGDPVDIVDPQGDLIARGMTNFSSEELPRMYGLTTEVLGDRYGSDY RKEVVHRNDLVLTDSAYEGRL >gi|294972137|gb|ADNU01000019.1| GENE 17 14217 - 15746 1239 509 aa, chain - ## HITS:1 COG:Cgl2306 KEGG:ns NR:ns ## COG: Cgl2306 COG0536 # Protein_GI_number: 19553556 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Corynebacterium glutamicum # 5 482 4 479 501 433 55.0 1e-121 MAIEFVDRVTLHVTAGNGGHGCVSVRREKFKPLGGPDGANGGDGGDVILRVDDQTTTLLP FHRSPHRKAENGGVGKGDLRHGVNGENLVLLVPEGSVVKTKDGHVLADLMGIGTEFIAAR GGRGGLGNAALASTKRKAPGFALLGEPGEERELVLEIKSVADIALVGFPSAGKSSLIAAL SAARPKIADYPFTTLKPNLGVVEAGDVRFTVADVPGLIPGAAQGRGLGLEFLRHIERCAA LVHVIDMATWESDRDPVSDLHAIEAELAEYEVEVDPSGDLLPLSKRPALVTLNKTDLPDG QDMSDMVRSELEAAGYRTFEISAVSHKGLKELSFAMAELVKEERERRAQVEDAPVRQIVR PVAVNDAGFDIVLEETSEGPVYRVLGSKPQRWVYQTDFSNDEAVGYLADRLERLGVEEKL FSMGAHPGDTIVIGPDDNSVVFDWDPTMVGGAELLGARGTDMRLEDDQRATRKERKAAFH ERMDAKAEARAELEAERLAEKRAREERSD >gi|294972137|gb|ADNU01000019.1| GENE 18 15825 - 16076 378 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50954530|ref|YP_061818.1| 50S ribosomal protein L27 [Leifsonia xyli subsp. xyli str. CTCB07] # 1 82 1 82 85 150 90 1e-35 MASKKGVSSTRNGRDSNAKRLGVKRYGGQVVNAGEILVRQRGTKFHPGINVGRGGDDTLF ALAAGTVEFGAKGGRKVVNIVAG >gi|294972137|gb|ADNU01000019.1| GENE 19 16095 - 16403 407 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62423858|ref|ZP_00379013.1| COG0261: Ribosomal protein L21 [Brevibacterium linens BL2] # 1 102 1 102 102 161 81 6e-39 MVYAIVRAGGHQEKVSVGDTITVNRIKADIGDSVELDVVLHVDGETVTHEPSALAKMAVT AEVVGEHRGPKIVIQKYKNKTGYKKRIGHRQDLTRLKITGIK >gi|294972137|gb|ADNU01000019.1| GENE 20 16446 - 16682 70 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSADVPWTICPITRKIQPRRQMHRRIILLTKNFLSKLEGHVVLRSFFFCDAFVVADHFGN DKGEKLFRKLRVKLSIRR >gi|294972137|gb|ADNU01000019.1| GENE 21 16554 - 16865 365 103 aa, chain - ## HITS:1 COG:SMc03858 KEGG:ns NR:ns ## COG: SMc03858 COG1605 # Protein_GI_number: 15966994 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Sinorhizobium meliloti # 6 94 9 97 111 105 65.0 2e-23 MTSHPELDRLRQSIDNLDSVLIHVLAERFKLTEQVGELKAETQLPAADPEREKRQVKRLR ALAADAQLDPEFAEKFLAFIVAEVIRHHERIAEEKATQNDVSL >gi|294972137|gb|ADNU01000019.1| GENE 22 16939 - 18489 660 516 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 45 486 19 440 456 258 34 3e-68 MVNALSNAQTIEEAINTGFEPIATGLEKIVFFAIPVGGGSLPLVLVWLIVGATIFTIITG FIQFRGFGVALEVVRGKFSSKDDPGEVTHFQALASAVSGTVGLGNIAGVGVAMSVGGPGA AFWMMVAGILGMATKFVECTLGVKYREIDEDGVVHGGPFKYLPVAFKRFGSPVTKLLTGI FAIAILLFGVVGGGMFQSNQAFAQMREATGGAEGPLGGPLGGLFAGIVLAGLVGLVVIGG IKVIGSVTDKLVPAMAILYVGSCLIVILGNFSHIPTAISEIITGAFTPEGGLGGMIGVMI VGFQRAAFSNEAGIGSSPIAHSAVKTRRPVSEGFVALLEPFLDTVVVCLMTALTVIIAGG SVYEQAREEAAAGESVAGVELVSAAFSTITGWWPILLAIAVVLFAVSTLITWAYYGEKAW HYLFGRRNWSDTLFRLILMAFILIGCLASFGSIVAFADAVLFICCFINIFGLYLLVPEVL REMKQYLADRKAGTLYELGAESEAELQEIREEQGNA >gi|294972137|gb|ADNU01000019.1| GENE 23 18681 - 21293 2445 870 aa, chain - ## HITS:1 COG:ML1468 KEGG:ns NR:ns ## COG: ML1468 COG1530 # Protein_GI_number: 15827770 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Mycobacterium leprae # 165 749 174 776 924 508 54.0 1e-143 MNTQDLDPKAGILADLEDLRKSRGKSGVEDDHQEATEVDQNKRDVLEDIARVAEDKRKEA ATAGATEKDEETEPQTERRRLDPLSSIFSNLPGQVAQPEKLVTTSAGDSFDPKAVFSAAQ QDEEELMEPVKAPSSNFLTFQQPQAELGEVVDPTWTGDDEDEDDSDDDDNDNDASDSSDE SEDSGESGDNDRRRRRRGGRGRRSRSRDDSGGSESQASSGENKDDSDSNNQADVKDSDDD DNQDSSRRRRRRRVRSAEDSVTGVKGSTRLEAKRQRRREGREAGRRRPLITEAEFLARRE SVERTMIVREHDGRTQLVVTEDGIAVEHYLSEAKAQASLIGNVYLGKVQNVLPSMEAAFV DIGKGRNAVLYAGEVNWDVLGMDGKPHRIEVALNPGDSVLVQVTKDPIGHKGARLTSQIS LPGRFLVYVPNNAMTGISRKLPDKERQRLRKLLGDAVPEGNGVIVRTAAEGASEEELTRD IDRLAKRWQTIEKRSTSTKVLAPQLLYSEPDMIVRIIRDVFNEDFTKLVIDGDGVYDTIH EYVELVAPDLVDRVERYTGDDDVFDHFRVSEQIEKALSRKVNLPSGGSLVIDRTEAMTVI DVNTGKFTGSGGNLEETVTKNNLEAAEEVIRQLRLRDIGGIIVVDFIDMVLESNRDLVVR RLVECLGRDRTKHQVAEVTSLGLVQMTRKRIGTGLAESLVAAGEDLSGRGLVLPGTEVDN SKQYKSRKKRTRSNEKSSAKPSSNELTAIAAATMRSRQDENAEAQEEAPAQATDKETTVA QKPVADEQTTTAQTQQTQEETQEAPPEAAPIVHAPGTVMIGDDTETKIQKAEPKKRPTVT PKEQRTEDTTERKPHEEAPALPVLIIGDDD >gi|294972137|gb|ADNU01000019.1| GENE 24 21615 - 22280 584 221 aa, chain + ## HITS:1 COG:MT3046 KEGG:ns NR:ns ## COG: MT3046 COG4243 # Protein_GI_number: 15842521 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 30 221 19 210 210 117 37.0 1e-26 MLDTVSPKQTEQDEHLETQLAQPSTWLLNPIVHGAYMVVLSVIGLIASFDLSIEKIKKLE SPDYILSCDMNPFFSCSGVMQFPQSQLFGFPNQLLGIAAFVFPLLLGVLLISRVRIPSWV MVGLNIGLLGGMALVVFLYISSIWVIGIGCPWCIVVWTITIPLFCTTTGYNALVGNFGAT IRDSITARVFASNSLLISVVLLFVVYVSIVIRFWGYFSTLI >gi|294972137|gb|ADNU01000019.1| GENE 25 22364 - 22780 469 138 aa, chain - ## HITS:1 COG:MT2521 KEGG:ns NR:ns ## COG: MT2521 COG0105 # Protein_GI_number: 15841969 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 1 136 1 133 136 155 60.0 3e-38 MSERTLVLIKPDGVKRGLIGEVISRIETKGYTIERLKMMVASRQLLSEHYEEHEGKPFFD HLVAFMASGPIVAMVVEGDGVILGFRALAGATDPTTAGPGTIRGDLGRDWGTAVQQNLVH GSDSSLSAEREIGLWFQD >gi|294972137|gb|ADNU01000019.1| GENE 26 22822 - 23235 444 137 aa, chain - ## HITS:1 COG:no KEGG:Ksed_09170 NR:ns ## KEGG: Ksed_09170 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 118 1 118 146 65 37.0 6e-10 MSQPLPTLPLKSKLPVLCGTILISEMLVVYLAFLVGYGLRPVSLTWLIVGASVITVLCIV AAATLPRKALGSGIGVPLGHVAQVCVLLTAFVLPAMLIVGVIFTAMWVVAVYWGRRIDRE ATEWAKEEIATATKKKS >gi|294972137|gb|ADNU01000019.1| GENE 27 23238 - 24599 1194 453 aa, chain - ## HITS:1 COG:ML1471 KEGG:ns NR:ns ## COG: ML1471 COG0285 # Protein_GI_number: 15827773 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Mycobacterium leprae # 2 451 23 482 485 312 42.0 9e-85 MDFTSEFARAQALLQARAGEMEVELRLDATRRACELLGDIHTFAPVITVTGTNGKTSTAR MIDTLIRAHDLRTGRFSSPHMQNLTERFSVDGEPVSAEKFVEIVDDIQPVLHIVDQELAQ TDRPPLTFFEALTVVAFAIFADAPVDAMVLEVGMGGEWDSTNVADAQVCVFTPVSLDHQQ FLGDTVEEIARTKAGILNRNVDPSPAPHPVAVVGPQVPEVEDVLASEFSDRGAQSRWLGR EFGLQSRVNAVDGQVIHVRTQLGDYPDLFLPLHGEHQAVNAAVALAAVEAFLGAEDKPLN AEIVGEGMSAVTSPGRVEILRSEPTVIVDGAHNAHAAQVLAETVSDAFDFAEVVAVVAMY ADKDPHGVFEHVHRFAKRVIVTQAQSPRAMEAEELASAAREWWEADDVVVENDMNSALMK ALDFALDESGTGVVVTGSLSTVGEARTLLGRKE >gi|294972137|gb|ADNU01000019.1| GENE 28 24599 - 27898 3173 1099 aa, chain - ## HITS:1 COG:MT1587 KEGG:ns NR:ns ## COG: MT1587 COG0060 # Protein_GI_number: 15841003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 11 1081 2 1027 1041 1258 58.0 0 MTETTGSEAHTQRVYPQATTFTGGLTPSPKFPELEKDILAYWNENNTFRKSVEQRDAGVD GENEFVFYDGPPFANGLPHYGHLLTSYVKDVVPRYQTMRGKKVERRFGWDTHGLPAELEA MRQLGLKTKDEILEMGVEKFNDAARASVLKYTNEWEEYVNRMGRWVDFENDYKTLNPEFM ESVLWVFKTLYDKGLIYEGFRVLPYCWSDETPLSNHELRMDEEVYKDRQDPSVTVGLTCS GGPLERLHGAKFLIWTTTPWTLPSNLAIVVGSDIDYVVVESEVPTGTAERYVIAQARLAA YAKELGEERTVVETLKGSDLLGHTYNPPFTYYEGHENAFRILEGDFVTTSDGTGLVHTAG AFGEDDYVVTQAAGIEAVMPVNASGQFTAPVKEFEGLQVFEANAPLIRQLKNATKKDGET GSVWDGTVLVRHETYNHSYPHCWRCKNPLIYKGVSSWFVEVTKIKDKMLANNEKITWVPD NVKHGQFGKWLENARDWSITRNRFWGSPVPVWKSDNPEYPRLDVYGSFEEIERDFGRLPT GPDGKPNLHRPYVDELTRPNPDDPTGKSTMRRVEDILDVWFDSGSMPYGQVHYPFDNKDW FEHHYPADFIVEYIGQTRGWFYTLHILASALFDKPAFMDVICHGIVLGSDGQKMSKSLRN YPDVNEVFERDGSDAMRWFLMSSPILRGGNLIVTEQGIRDGVRQVILPAWNAWYFFATYS NTAESADGADTRGYSAKKRYESSQVLDRYLLAKTHDFLVDFQQAMDSYDLWNGCQLIREY LDILTNWYVRRSRRRFWDGTATTHESFDVFYTCFEAFIRAASPLMPFVAEEIFRGLTGEE SVHLADYPDATLFPEDQDLVERMDATRGVCSVGSSLRKAQHLRVRLPLSTLTVATDIELG EDFTSIIADELNVKSVDVLRMNEAAEAGFSLDHKLTVNARAAGPRLGKEVQTAIKGSKTG DWSVNDGVVVSGGIELVEGEYTLEEVAEAARDSVVLAPTDSGFVALDTTVTPELEAEGLA RDAVRAIQNIRRELDLDVSDRIRVTLFTDDATAKALTPHRLLIAGETLALQFELSTDKAE GDDLHSANELNANIRVVKA >gi|294972137|gb|ADNU01000019.1| GENE 29 28235 - 28993 871 252 aa, chain + ## HITS:1 COG:MT0502 KEGG:ns NR:ns ## COG: MT0502 COG4221 # Protein_GI_number: 15839874 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Mycobacterium tuberculosis CDC1551 # 4 247 7 246 251 189 52.0 4e-48 MTDQKLRAVVTGASSGIGAATVRQLRALDWDVVAVARREDKLKALAEETGATYIVADMTS DDDVARMAEEVRAQGPVHSLVANAGFALGTDEVKDANVEDWKKMFDINVLGVVRAVKALL PALVDSGRGDICIMSSTAGHIAYEGGGGYVAAKHGTTSVAETLRLELAGQPVRVMEIAPG MVATDEFSLKRLGSQEAADKVYEGVERPLTAEDVADAVVYTLTRPHHFNVDLMVIRPIAQ AAQHKVARNSGL >gi|294972137|gb|ADNU01000019.1| GENE 30 29036 - 31681 2560 881 aa, chain + ## HITS:1 COG:RP687 KEGG:ns NR:ns ## COG: RP687 COG0525 # Protein_GI_number: 15604530 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Rickettsia prowazekii # 24 827 15 770 814 588 39.0 1e-167 MNNGPSTHDSVHLPDKPALEGLSEKWDAKWSEEQVYAFDRNTTREEVYAIDTPPPTASGS LHVGHVFSYTHTDVMARYMRMTGKNVFYPMGWDDNGLPTERRVQNYYGVKCEPSLPYDPD FTPPEKPAKNPRDFVAVSRLNFIELCEKLSAEDEKVFEQLFRSVGLSVDWNYSYRTIDDK SRAVSQRAFLHDLKAGQAYSQDAPTMWDVTFGTAVAQAELEDREKEGAYHKVKFFPTGPD GLADTTREPVVILTSRPELIPAVVALVAHPDDERYQGLFGSTVVSPLFGVEVEVKAHELA KSDKGTGIAMVCTFGDLTDVTWWRELDLPTRAVVTRDGRLSREVPEWIANSAKPDAAEVY GKLAGKTTFTARKEIAELLEESGDLTGPIEQITHPVPFYEKGDKPLEVVTSRQWYIRNGG RSAELRDALIARGREIDWHPAFMRSRYENWVEGLSGDWLVSRQRYFGVPIPLWYRLDGQG QPDYDDPIVPRNDQLPVDPQAHTPEGYRDEQRDQPGGFTGDPDVLDTWATSSLTPQLIGG WSTDDNLFNKVFPFDLRPQGHDIIRTWLFSTVVRANSINGSIPWTNTALSGWILDPDRKK MSKSKGNVVVPSDIIAETKPGFGPDAVRYWAASARLGGDTAYDVSQMQIGRRLAMKLLNA SKFALAQGVHAGHVQDFAHVTHPLDQAFLAKLRATIEQAGAYFAEYDYAHALRVTESFFW EFTDDYVELVKDRSYGAQGEQAQLSAHVTLATALDALLRLFAPFMPFVTEEVWSWWHNGS IHRTTWPSATEITAGDTSGVDLETIATILAEVRRAKTEAKVSQKTEVASATLRATAAVVA MAEAARGDLEAAGRIRGWELTVDDAQTEPTVTDIEFAVEEK >gi|294972137|gb|ADNU01000019.1| GENE 31 31696 - 32367 487 223 aa, chain + ## HITS:1 COG:DR0625 KEGG:ns NR:ns ## COG: DR0625 COG2013 # Protein_GI_number: 15805652 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 4 223 16 232 254 135 34.0 5e-32 MRSELFADIHQEKNNTERWTLQSKRMLRTYITPDAPMVATKGSMVAYQGNVTFRHKGSRS VGEFFKKQLTSEDTPMMSVEGHGEVFYARNAANIFLMQLEGDQDALTVNSSRLLAFDAHL NWDIKRIRGGMGALASGSGLFNIEMSGQGSASVCCYGDPMVLDCSQTPTYVDPQAAVCWS ANLAPQIKVDASIGTFIGRESGETVQLMFHGPGFVVVQPAETY >gi|294972137|gb|ADNU01000019.1| GENE 32 32386 - 33645 1208 419 aa, chain - ## HITS:1 COG:Rv2457c KEGG:ns NR:ns ## COG: Rv2457c COG1219 # Protein_GI_number: 15609594 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Mycobacterium tuberculosis H37Rv # 5 416 7 422 426 581 70.0 1e-165 MTRAGADLLKCSFCDKTQKQVRKLIAGSGVYICDECIGLCNEIIDEELNAGKKTEEKIEL PKPQDIFDHLNDFVVGQASAKRALSVAVYNHYKRINAMQSGDKPDVEIAKSNILMVGPTG SGKTYVAQTLAKKLNVPFAVADATSLTEAGYVGEDVENILLKLLQAADFDVERAQTGIIY IDEIDKISRKAENPSITRDVSGEGVQQALLKILEGTQASVPPQGGRKHPHQEFIQLDTTN VLFIVAGAFAGLEEIISARKGKHGIGFGALIQSKEDNVNHFEDLLPEDLLKFGLIPEFIG RVPVIATLDNLDREALIAILTEPRNALVKQYQAMFNMDGVELEFEHEALEAIADLALLRE TGARGLRSILEEVLQPIMFELPSRDDIERVVITKDVVSSNVAPTLVPKKERKRPSRKTA >gi|294972137|gb|ADNU01000019.1| GENE 33 33845 - 34492 660 215 aa, chain - ## HITS:1 COG:Cgl2359 KEGG:ns NR:ns ## COG: Cgl2359 COG0740 # Protein_GI_number: 19553609 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 13 212 7 205 208 263 72.0 1e-70 MTHIDPWATAGNMPTSRYVMPQFEERTPYGFKRQDPYTKLFEDRVIFLGVQVDDTSADDV MAQLLVLESQDPDRDITLYINSPGGSFTALTAIYDTMQYIKPEIQTVCLGQAASAAAVLL AAGAPGKRLALPNARVLIHQPAMQGQGQGQASDLEIQANEVLRMRRWLEETLAKHSNKSA DEVSNDIERDLFLTAEEAKNYGLVDQVLSSRKGVK >gi|294972137|gb|ADNU01000019.1| GENE 34 34505 - 35116 726 203 aa, chain - ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 14 194 11 191 197 242 65.0 4e-64 MTNHEWTMDVPGSGMGLDDHIYNRLLKERIIWLGSEVRDSNANAICAQLMLLAAEDPEKD IWLYINSPGGSVTAGMAIYDTMQYIKPDVGTVAMGMAASMGQFLLSAGAKGKRFATPHAR ILMHQPLGGIGGTATDIKIQAELILHMKRQMAEITAEQTGKTVEQILKDNDRDHWFTADE ALDYGFIDKVVTHAADVPAAASN >gi|294972137|gb|ADNU01000019.1| GENE 35 35290 - 36672 1595 460 aa, chain - ## HITS:1 COG:ML1481 KEGG:ns NR:ns ## COG: ML1481 COG0544 # Protein_GI_number: 15827779 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Mycobacterium leprae # 1 455 1 469 469 295 41.0 2e-79 MKSSVEKLDPTRVKLSVEVPFAELKPSIDEAYKQIARQINVPGFRRGKVPAKLIDHRVGR PVVMQEAVNNSLDDFFRRAVEENNVEPLGQPEVEVSEVPGLDGKDEGELKFTVEVDCVPE VELPEYSDISVEVEPFEVTEEDVEAELDALRSRFGTLIAVDRPAENDDFVTLDLVALVEE EEVDSATDVSYQVGSGTMLKGMDEALDGLSEGEETSFETQLAGGEHAGKDALVKLTLKSV KERELAEADDDFAQMASEFDTIEELREDLKETAKRNKELEQGVAARDKVLEALLEKVDVP VPAKLVEAEVNRHLENENRTDDDEHRKEVTEETERTLRTQFILDAIVKVESIEVSQQELI EYIMTASQQYGMSPQDFMQALGSQGQVMALQADVARRKGLASVLSEAKVVDTEGNEVDMT AFTTPEADEEEVAEAVAEAEEAVEEAEAAENAQAEEGGDK Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:06:27 2011 Seq name: gi|294972136|gb|ADNU01000020.1| Brevibacterium mcbrellneri ATCC 49030 contig00022, whole genome shotgun sequence Length of sequence - 1380 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 101 - 1140 92.0 # AE016822 [D:135816..138903] # 23S ribosomal RNA # Leifsonia xyli subsp. xyli str. CTCB07 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Microbacteriaceae; Leifsonia. Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:06:41 2011 Seq name: gi|294972081|gb|ADNU01000021.1| Brevibacterium mcbrellneri ATCC 49030 contig00023, whole genome shotgun sequence Length of sequence - 49835 bp Number of predicted genes - 55, with homology - 52 Number of transcription units - 42, operones - 11 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 753 575 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 2 2 Tu 1 . + CDS 995 - 1654 399 ## COG0500 SAM-dependent methyltransferases - Term 1554 - 1607 -0.6 3 3 Tu 1 . - CDS 1638 - 2351 499 ## cpfrc_01932 hypothetical protein - Prom 2418 - 2477 2.1 + Prom 2287 - 2346 1.6 4 4 Tu 1 . + CDS 2428 - 5805 2165 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 5906 - 5944 0.1 5 5 Op 1 . - CDS 5792 - 6964 1397 ## MCCL_1696 hypothetical protein 6 5 Op 2 . - CDS 6961 - 8160 967 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 8208 - 8267 1.7 7 6 Tu 1 . + CDS 8309 - 8911 354 ## COG2323 Predicted membrane protein + Term 8925 - 8958 0.3 - Term 8839 - 8893 1.1 8 7 Tu 1 . - CDS 8925 - 10313 1109 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 10469 - 10528 3.2 + Prom 10247 - 10306 1.7 9 8 Tu 1 . + CDS 10556 - 10873 193 ## COG1937 Uncharacterized protein conserved in bacteria - Term 10842 - 10899 15.3 10 9 Tu 1 . - CDS 10908 - 12443 1068 ## COG0069 Glutamate synthase domain 2 - Prom 12532 - 12591 1.6 - Term 12562 - 12607 12.0 11 10 Op 1 16/0.000 - CDS 12621 - 13364 329 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 12 10 Op 2 . - CDS 13361 - 14950 1517 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 13 11 Tu 1 . + CDS 15066 - 16451 1243 ## COG0477 Permeases of the major facilitator superfamily + Term 16466 - 16511 14.2 14 12 Tu 1 . + CDS 17285 - 17944 364 ## gi|295395029|ref|ZP_06805239.1| conserved hypothetical protein 15 13 Tu 1 . - CDS 17964 - 19076 857 ## COG0598 Mg2+ and Co2+ transporters - Prom 19137 - 19196 2.5 16 14 Op 1 . + CDS 19321 - 19752 403 ## gi|295395031|ref|ZP_06805241.1| hypothetical protein HMPREF0183_0739 17 14 Op 2 . + CDS 19792 - 21387 1556 ## COG0433 Predicted ATPase 18 14 Op 3 . + CDS 21430 - 22161 574 ## PROTEIN SUPPORTED gi|229254338|ref|ZP_04378269.1| acetyltransferase, ribosomal protein N-acetylase 19 14 Op 4 . + CDS 22189 - 22767 574 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 22958 - 22987 2.1 20 15 Tu 1 . - CDS 22769 - 23215 355 ## cauri_0775 putative redox protein, regulator of disulfide bond formation 21 16 Op 1 . + CDS 23247 - 24197 726 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 22 16 Op 2 . + CDS 24455 - 25516 1206 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 25541 - 25587 13.1 - Term 25524 - 25579 16.8 23 17 Tu 1 . - CDS 25641 - 26078 506 ## CE1087 hypothetical protein - Prom 26104 - 26163 1.7 24 18 Tu 1 . + CDS 26136 - 26588 381 ## COG4405 Uncharacterized protein conserved in bacteria + Term 26683 - 26723 -0.9 - Term 26341 - 26393 4.0 25 19 Op 1 . - CDS 26607 - 27128 319 ## CE1090 hypothetical protein 26 19 Op 2 . - CDS 27141 - 27746 396 ## Micau_0635 regulatory protein TetR - Prom 27820 - 27879 2.9 + Prom 27742 - 27801 3.5 27 20 Tu 1 . + CDS 27827 - 28297 461 ## Ksed_02840 hypothetical protein 28 21 Tu 1 . - CDS 28352 - 29107 550 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 29171 - 29230 2.7 29 22 Op 1 . + CDS 29169 - 29537 251 ## HMPREF0675_4292 transcriptional regulator, ArsR family 30 22 Op 2 . + CDS 29530 - 30471 914 ## COG1230 Co/Zn/Cd efflux system component + Term 30642 - 30680 3.9 31 23 Tu 1 . + CDS 30710 - 31804 928 ## COG3177 Uncharacterized conserved protein + Term 31850 - 31886 3.5 + Prom 31825 - 31884 1.8 32 24 Op 1 . + CDS 32064 - 32303 453 ## gi|295395048|ref|ZP_06805258.1| conserved hypothetical protein 33 24 Op 2 . + CDS 32391 - 32807 216 ## Haur_3193 hypothetical protein - Term 32728 - 32766 2.0 34 25 Tu 1 . - CDS 32890 - 33534 325 ## gi|295395050|ref|ZP_06805260.1| conserved hypothetical protein - Prom 33599 - 33658 2.8 35 26 Tu 1 . + CDS 33655 - 35169 579 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 35195 - 35233 2.8 - Term 35478 - 35514 3.3 36 27 Tu 1 . - CDS 35595 - 35924 343 ## gi|295395052|ref|ZP_06805262.1| conserved hypothetical protein 37 28 Op 1 . + CDS 36181 - 36651 274 ## Celal_0215 hnh endonuclease 38 28 Op 2 . + CDS 36682 - 37032 205 ## AMED_2075 glyoxalase/bleomycin resistance protein/dioxygenase 39 29 Tu 1 . - CDS 37224 - 37529 331 ## gi|295395055|ref|ZP_06805265.1| XRE family transcriptional regulator - Term 37728 - 37779 2.1 40 30 Tu 1 . - CDS 37853 - 39385 808 ## COG4823 Abortive infection bacteriophage resistance protein - Prom 39475 - 39534 7.0 + Prom 39889 - 39948 1.5 41 31 Tu 1 . + CDS 40040 - 41047 127 ## gi|295395057|ref|ZP_06805267.1| conserved hypothetical protein 42 32 Tu 1 . + CDS 41300 - 41761 56 ## gi|295395058|ref|ZP_06805268.1| conserved hypothetical protein 43 33 Tu 1 . - CDS 41974 - 42183 78 ## 44 34 Tu 1 . + CDS 42077 - 42550 379 ## Bfae_21830 hypothetical protein + Term 42637 - 42677 -1.0 45 35 Op 1 . - CDS 42798 - 43154 355 ## Svir_21380 hypothetical protein 46 35 Op 2 . - CDS 43151 - 43744 336 ## Lxx19580 TetR family transcriptional regulator - Prom 43773 - 43832 3.2 - Term 43862 - 43889 -0.9 47 36 Tu 1 . - CDS 43957 - 44328 179 ## gi|295395062|ref|ZP_06805272.1| conserved hypothetical protein 48 37 Tu 1 . + CDS 44398 - 44706 188 ## gi|295395063|ref|ZP_06805273.1| conserved hypothetical protein + Term 44919 - 44968 -0.2 49 38 Tu 1 . - CDS 45019 - 45192 71 ## gi|295395064|ref|ZP_06805274.1| conserved hypothetical protein 50 39 Tu 1 . + CDS 45191 - 45445 98 ## 51 40 Tu 1 . + CDS 46160 - 47881 1385 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Term 47885 - 47928 -0.5 52 41 Op 1 . - CDS 47953 - 48378 191 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain 53 41 Op 2 . - CDS 48375 - 48608 245 ## Caci_0629 hypothetical protein - Prom 48686 - 48745 2.9 54 42 Op 1 . + CDS 49198 - 49443 208 ## cauri_0024 hypothetical protein 55 42 Op 2 . + CDS 49395 - 49679 139 ## Predicted protein(s) >gi|294972081|gb|ADNU01000021.1| GENE 1 3 - 753 575 250 aa, chain - ## HITS:1 COG:HI0193 KEGG:ns NR:ns ## COG: HI0193 COG0596 # Protein_GI_number: 16272156 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Haemophilus influenzae # 4 250 37 281 287 126 32.0 3e-29 MGNLHVTRMGEQGPTLVFLHGLMGRGKNFTGVAKELSKDFRMVLIDLPNHGESYWTETFS YTDMAQAVADEIKGDAPVYLLGHSMGGKVAMTLALTEPELVDKLIIEDISPQAGGDMGEF VHLLGTLKKLDLDSLTSRAEAHERIAEDIPDESVRGFLLQNLRRSGDGFEWQPNLNLLFD SLKDIGSFPSIDATYDRKVLWVVGENSAYGDPKFLPLVREYFPRAVRLVIRDAGHWVHSE QPQVFVDAVR >gi|294972081|gb|ADNU01000021.1| GENE 2 995 - 1654 399 219 aa, chain + ## HITS:1 COG:Cgl1091 KEGG:ns NR:ns ## COG: Cgl1091 COG0500 # Protein_GI_number: 19552341 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 1 213 60 284 288 107 28.0 2e-23 MVLARDRFLTSGAYAPLKNSLAEVVAALPHTHLLDVGCGTGYYLGGLLETLGAPTLGLGF DTATRAVRLAARAHPDITAFTWDVFRDFPLLDGTIDVVLDVFSPRNGPEFHRVLAPGGHT VVVTPEPQHLKELRASTDMVGIDPRKDERLNRALHMFEPVRESVISYDCQLTPELARDLI FMTPSARHLSTDTVTDSQLPTSATVAVKISVWRKPTERR >gi|294972081|gb|ADNU01000021.1| GENE 3 1638 - 2351 499 237 aa, chain - ## HITS:1 COG:no KEGG:cpfrc_01932 NR:ns ## KEGG: cpfrc_01932 # Name: not_defined # Def: hypothetical protein # Organism: C.pseudotuberculosis # Pathway: not_defined # 3 233 2 219 224 80 26.0 4e-14 MKWVIVPGLSLLPEDYSGLSELLPGPVEVIDAWEHDPTGDIEDLRKAVDISEPFALIGHS VGGVTALEWALKYPKDIIRLVLLDPSAPLTFVGGWLTRGTVFERFSAPVVDKVARALTPW GAQIRKHLFTRASGLADHLPRTHATHRFVSRPGLQTVVDQWFSSWEQEYRLSSLLMSNHV LDRRLHPTIVCSSGSARAVSVAKQRRLARLIGAELHIAEGADHMFPVTEPQRVIAAL >gi|294972081|gb|ADNU01000021.1| GENE 4 2428 - 5805 2165 1125 aa, chain + ## HITS:1 COG:Rv1640c_2 KEGG:ns NR:ns ## COG: Rv1640c_2 COG1190 # Protein_GI_number: 15608778 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis H37Rv # 638 1122 8 494 495 398 45.0 1e-110 MTQRTSLRKTEALARVFIWLYVLAAMWTTLTIPIRLSNVADAGYIFFSLFTVPAEPSLVA VVFLIAVATTAARRLRIAHTAMLVVAVLSVLASVLNTSAVISLGPSSELHVSVTSPLDAL FFSLPFRIVGLVLNAVSLILIIIMRPAFPGRIRTTNFLKALGILLSGLAVSFLVALLTSA LTPVGSSDWGERLTFALSAALGSTSGLSSITDGQHPTTFIVFYISGAISALALIWALIVM FRIRAKPAPITPDEELAIRRMVLDFGDLDSLSYFATRRDKSAVFSQDRKAAVLYGAVGNV FVASGDPVGDPASWPHAIESWHSHCRSVGARPVVLACSQESARLYRASGLSIVAIGDEAV VNTADFNISSPALADIRKTIRRMNREGITAKVARVRDLPADLVTQLENCRDAWRNHEVER GFSMALGRMGDPADSNSVIAWACDSSGYPIGFLSFVPWGRNGLSLDVMVHSPTAVPGVTD FLVAQAALQGRDMGIKHISLNFAVFRDVFVATDELRAGPLTRASDKLLKVASRSFQIESL YRANQKYQPQWSPRWVAFDDTMMVFHALYSMSVAEGFIPPPSLRAVLAWMWASITQTTPT PLFGAQPTITSDDFLTRVKELDYEFIRPPSPQYTWSSQQRHRIDHKLALESAGIETYPVE GPTSTTSVWELNMQNRPVPAPGTLTAAEVTVRGRVRSRRRFGRLVFMDIEQDGAFVQTVW DRSKVSDWHVSLFDVGDFVSVTGHVGTTDHGELSVFVEQFTLLAKAIRPTPALGHPVGEE ERRTNRSLDLLTDVSARDILVARSSAIRSLRDTLHAQSYMEVETPMLHTVHGGAAARPFT THINAYDMDLSLRIAPELYLKRLMVGGMDRIFEIGRNFRNEGVDATHNPEFTSLEAYASG LTYHDMERLTIALIENAARAVNSEPVAKYRDASGKVQELYLPGSWRSMTIHEAVSHAVGR ELTLDTAPEVYRAECARAGIEVPTDASQAYMLMELYDELVEKQTVEPTFYYDFPAEKSPL ARPGRNDSRVSEQWDLVAFGMEVGTAYSELIDPMIQRERLTEQSLAAAAGDPEAMEVDEA FLTALEMGAPPMGGLGLGVDRVVMMLTATTIRQTLTFPFLKPTGS >gi|294972081|gb|ADNU01000021.1| GENE 5 5792 - 6964 1397 390 aa, chain - ## HITS:1 COG:no KEGG:MCCL_1696 NR:ns ## KEGG: MCCL_1696 # Name: not_defined # Def: hypothetical protein # Organism: M.caseolyticus # Pathway: not_defined # 4 390 6 385 385 225 36.0 2e-57 MTAIFAATIILAFIALGELISLWSKARIPALLIAMLGTFIAVQLNIIPKTIIDDSYLPQI YAILVAPLLFHMGSLIPLKTMLAQWRSVVISVAGMIVAVGVIAAVVGPIFGFQYVVAGAG PLAGGIVSTGLTTDGLKAANVDSAIVVLPALVLMLQSLPSMPLTNLLLRKFAINLRDSGD LEELARNYKKAQKENGGDKKLVNLPQMLVDNELFILFLILVGGSLATLLAIPTHIPSSII ALVLGVASTAIGLTPERSMEKSNSFGVAMASVVAIVMAPLVAASLSDVLAALLPVAVILA VGAVGIMIGGAIATKLLKWKTSLGMSVALTAMYGFPADYLLTNEVVRSVGRTDEERDALR EAMLPAMLVGGFTSVSAGSVVIASILVSFL >gi|294972081|gb|ADNU01000021.1| GENE 6 6961 - 8160 967 399 aa, chain - ## HITS:1 COG:FN0590 KEGG:ns NR:ns ## COG: FN0590 COG1473 # Protein_GI_number: 19703925 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 16 392 16 390 393 246 36.0 4e-65 MTIDFVAEAKEIAPDLIALRREIHADPELGNDLPRTQKRVLDALEGLPVEITLGKELSSI TAVLRGGKPGPTVLLRGDMDALPVVEETGLPYAATNGTMHACGHDLHTAGLVGAVRLLSA HQDELPGTVVFMFQPGEEGPGGAKPMLEEGLLTAAGSPVDAAFALHVLPGEQGVFECRPG TAMAGSNYLRVTFHGEGGHGSRPDAATDPVPPLVEFCQAVQVMITRRFSVFDPVVLSITT LKGGEALNVIPPAASMGGTVRTLSHETTEKFPQYAKQLAESIAQAHNCTVDFDWETFYAV TVNAREEADLVRSTLTEVFGEERFNAPEKPVMGSEDFSFVLQEVPGAYLILQASPPHVDP ATAAYNHSPRVLFDDAVLTDQAAALAHIAWEYNQRGDNS >gi|294972081|gb|ADNU01000021.1| GENE 7 8309 - 8911 354 200 aa, chain + ## HITS:1 COG:BH2297 KEGG:ns NR:ns ## COG: BH2297 COG2323 # Protein_GI_number: 15614860 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 30 170 17 158 232 67 34.0 2e-11 MVERFTPPQGWEAAAGELLGIDLWRIPFVIISAVTIYVAFLVLIRIFGIRILGTMSSFDA VVIIMFGAVAGRVILGHPPTVMVGIIGLATLMVMEAIFGALQHTVGFRRTVSAPPRLLMA HGQMIPHAMQRAHITEANLYVAIREAGIASPGLVQCVILEANGRLSVIKEGTPIDPCLLE NIEGRELLMQDPGPSGSTPQ >gi|294972081|gb|ADNU01000021.1| GENE 8 8925 - 10313 1109 462 aa, chain - ## HITS:1 COG:Cgl1279_1 KEGG:ns NR:ns ## COG: Cgl1279_1 COG0491 # Protein_GI_number: 19552529 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Corynebacterium glutamicum # 1 272 1 273 273 379 65.0 1e-105 MLLERFYDEDLSQASYFIGCQATGEALVIDPRRDIHVYTELAQRNGMKIVAATETHIHAD YLSGTRELQNAGATAYVSKEGGADWTYGFDAELLGHGDTIRIGNLTLDARHTPGHTPEHL MFLLTDGAFSDEPGYAFTGDFVFAGDLGRPDLLDEAAGGKDTRFGGAQDQFDSLAREFVT LPDYLQVFPAHGAGSPCGKALGAVPSSTVGYEKRNAWWAPFVASGDRDGFVNQLLDGQPD AHAYFARMKTENRDGPAVIGEVKDLVEYSAKELAPLVESAEVVVVDPRHNSDVHEGTVAG SLNIPGPDKAASFGAWAYDPQKDSTPLVILASDRDEAGEIRDHLVRVGIDTVTGYVTDMV GLPVYVPAVIPFHEVTDTDYLLDVRGRGEFDAGHIPGAHNINGGRVLWRTQDLPQDARIV SYCQSGVRNSVAASALRRAGFDVAELEGSYGKWAKDQAAENA >gi|294972081|gb|ADNU01000021.1| GENE 9 10556 - 10873 193 105 aa, chain + ## HITS:1 COG:Cgl0056 KEGG:ns NR:ns ## COG: Cgl0056 COG1937 # Protein_GI_number: 19551306 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 21 105 1 85 85 110 61.0 7e-25 MQHYPWGYIVSTVDPSRKDHMDLEPESMKPVINRLKRAQGQIAGVIRLLEEGADCRSAVT QLAAASKAVDRAGFAIIATGLDECMAQGNEPEVRKDLEKLFMSLS >gi|294972081|gb|ADNU01000021.1| GENE 10 10908 - 12443 1068 511 aa, chain - ## HITS:1 COG:PA3602 KEGG:ns NR:ns ## COG: PA3602 COG0069 # Protein_GI_number: 15598798 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Pseudomonas aeruginosa # 16 506 39 532 536 555 53.0 1e-158 MGSRSKIISLAAAVTATATAGLAVRDLLQKKHSLLRNYPVAGHARYMLEDIRPQIQQYFI ERNWDGRPFDRDTRSLIYARAKGQDDDDAFGTELDVTRVGAEYLVHSMAPVAMPENPPRV HIGGDECSQPYDMSLMNISAMSFGSLSDNAVRALNKGAELGGFLHDTGEGAISPYHQEAN GDLMWELGTGYFGARDENGNFDPQRFRDRSADEQVKCVSLKLSQGAKPGLGGMLPGAKVT PEIAEIRGIPVGQDCISPAYHRVFSTPVELIEFTARMRELSGGKPAGFKLCVTSRTQVLA VCKAMLEVGTTPDFIIIDGSEGGTGAAPLEFEDHMGMPLTEGLATFHNALVGTGLRDRIK LGAAGKVAAGNDIVKRLIQGADFTMSARAMMMAIGCIQAQVCNTGKCPVGVATQNPLRAR ALDVEDKSMRVFRYHQATVNQAVRLMAAMGVENPSELDYSMLRKRVSHKQTCGFDQLFDH LGDGELLSQAPEAWEAAWNAASPHSFLPARK >gi|294972081|gb|ADNU01000021.1| GENE 11 12621 - 13364 329 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 222 1 219 309 131 34 9e-30 MSKETSPAIKVSELRKSFGDNEVIKGIDFEVAHGEVISLIGPSGSGKSTILRMLNRLEDP TAGHVVIDGTDITDPATNLNTVRQHIGMVFQHFNLFPNMTVIENIMLAPVELKKKSSKDA RDYAMRLLERVGLEDKADERPHKLSGGQKQRVAIARALAMEPQIMLFDEATSALDPEMVG EVLQVIRDLAKEGMTMILVTHEMSFAREVCDRVFFLADGELVESGPPEEVFDKPEHQRTQ DFLAKVL >gi|294972081|gb|ADNU01000021.1| GENE 12 13361 - 14950 1517 529 aa, chain - ## HITS:1 COG:lin0840_1 KEGG:ns NR:ns ## COG: lin0840_1 COG0834 # Protein_GI_number: 16799914 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 79 311 30 261 268 279 61.0 1e-74 MGVVKVTFSTLAIVETLRHLLRNANGEGFTLHVQIQRRFTMALAWVVTALLVGVLTVAGF TPAHAQTDTSKTVAQTSGAQGKKYTIATDTTFAPFEFRDPATGKLTGIDMDLLKAIAEDQ GFEVEIQSVGFQAAVTAVDAGQADGVIAGMGITDERKQKFDFSEPYFDSGIQMAISENND EIKGYEDLEGKTVVAKTGTEGEAVAKELAEEHNFRIKGLDQSATMYESVKNGTAVAVFDD YPVLAYGVEQGNGLKIVTDKVPGSQYGFAVKKDHNTELLEAFNAGLKNLKDSGEYDKVVD SYLGGASKEDSKPGNIFSLAQQTWPALAKGLWNTLAITVVSFAIAMVLGLVFGFMKVSQN RVLAGIASVFVAIFRGTPLLVWAFFFYFGLPQLMGTKGDVFIAGVATLALNAGAYLTEIV RGGIQAVDVGQMEAARSLGLPWGKSMQKVVVPQAVKIATPSIINQLVITLKDSSLLLTIG FAELLYQAQQVYASNFRTTEMLIIVGVIYFVIITVLTWIANIVDRRLNK >gi|294972081|gb|ADNU01000021.1| GENE 13 15066 - 16451 1243 461 aa, chain + ## HITS:1 COG:MT3580 KEGG:ns NR:ns ## COG: MT3580 COG0477 # Protein_GI_number: 15843086 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 7 444 4 442 449 518 59.0 1e-147 MSEESHSISATSTRAPQSLGRSVANTLKGSAGNLVEWYDVYVYSVFAKAFEHQFFSEEDS NSTIYVWAIFAVTFVMRPVGSWYFGRFADRHGRKAALTFSILVMAGCSFVIALTPTRESI GVWAAVILILCRLIQGFATGGEYGTSATYMSEAAVAKHRGFLSSFQYVTLVGGHVLAQTV FLAMLLFADMEWISGMGWRIAFLIGGLGALVVLWLRRTMDESMTQESIDAARSGGSKQSG SMKELLTAYWRELLVCFLVTMGGTLAFYGYSVNGPNVVKASFSEDAITGSVISLIALTLL MIMQPIGGAISDRVGRRTLLVFFGVGGVLFTWVMFLVLPGVTNPIFAFLILAIGFVILTG YTSINAIVKAELFPTHVRALGVGLGYALANSIFGGTAPVIWSAAKANHAGLFVVYATVTI GLSLMVYLFMLRNRGLNWLDNPEGMTERKNGPDHKHFPMGV >gi|294972081|gb|ADNU01000021.1| GENE 14 17285 - 17944 364 219 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395029|ref|ZP_06805239.1| ## NR: gi|295395029|ref|ZP_06805239.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 219 1 219 219 408 100.0 1e-112 MTRIKQRYLDELEHEFNTTGQVTLRVRPVAKIHNWVVIPRGAMALWVGSVFYLWLNYVEG TWKNPLMWLLLACFATFAIMVPVAAVKAVVLRLRPRPQDKLETRDWVITREGLYPPDFAR TSEEIPPLFYAWDGILYIDAQQFPNKWPWPPYTAIIAPDVHTVKRLQTERPHIKGKLAYY YLNGNIRSAHITWRHTRDARTLAEFLNRCKAQYSSTTRR >gi|294972081|gb|ADNU01000021.1| GENE 15 17964 - 19076 857 370 aa, chain - ## HITS:1 COG:Cgl0061 KEGG:ns NR:ns ## COG: Cgl0061 COG0598 # Protein_GI_number: 19551311 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Corynebacterium glutamicum # 20 370 25 373 373 380 53.0 1e-105 MPSRRLSRGFRVPRSRKVVATTSTAPARTKSPVVTEIDKGVPCRVEGEMSLKQAMDLTNS SPDNMVLLLYPSPTKEEIRELENEWDLHPLLTDDLLNAHQRPKVERYGDVMFLVARAASY IDEQEEVRFSEFHVLMKDGVVVVLCQDGRWIDGEDGLQMDVYNALVARKHGKTVLANQGM LSYGPEAIIYRLLAAIVVGYAPVLRGIAIDREQIERQVFSGDAAVAERIYRLSQEVIDMQ HTIASLNEVIDSLRDGFEKYEIPEDLRTYLDDVEDDLLHALRQTADLRDALAQILSVNAT LVSQRQNEDMKKISGWAAILFAPTLIGAIYGMNFDHMPELHWALGYPMAIGMMVGVGVLL YYFFRKSDWM >gi|294972081|gb|ADNU01000021.1| GENE 16 19321 - 19752 403 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395031|ref|ZP_06805241.1| ## NR: gi|295395031|ref|ZP_06805241.1| hypothetical protein HMPREF0183_0739 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0739 [Brevibacterium mcbrellneri ATCC 49030] # 1 143 1 143 143 286 100.0 4e-76 MTTPDIEVDYDSADSILEAIGRCLRVDRKLNQRKPWDGFVVVSGYEPGHSAHQAWRFIGG ETRITTVSGANPAFNKALIARLRELTADPERGDWQTWVARYDLATDSFDHTFLWPGEDDG YNVLAYDTPMSAIERLNPANPAE >gi|294972081|gb|ADNU01000021.1| GENE 17 19792 - 21387 1556 531 aa, chain + ## HITS:1 COG:MT2585 KEGG:ns NR:ns ## COG: MT2585 COG0433 # Protein_GI_number: 15842038 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 8 530 17 533 533 498 54.0 1e-140 MTSALDAIRDGYSFSEPAIELGSALDGDTPVTDARVRIPLSMLNRHGLIAGATGTGKTVT LQVLTEAITRAGVPVFAADLKGDLSGMASEGQASEKLLARTKANGQDWEPAASAVTFYAL GGEGTGIPMRATVSSFGPLLLAKVLGLNETQESVLGLIFHYADSNGLALLDLSDLKAVLM FLTSDEGKAELKSIGGVSTASAGVILRSIANLEAQGAEAFFGEPEFDISDLLRTEGPAGV VSMLELPAVQNRPALFSTFLMWLLAELFEQLPEVGDADKPKLVFFFDEAHLLFEGASKAF IESVTQTVRLIRSKGVGIFFVTQRPTDVPEEILAQLGSRVQHQLRAHTPKEAKAMKDTVA TFPVTDFDLGELLTSLGTGEAIVTVMDPDGSPTPVAPTKVFAPTSKMGPTSPEVMAQMVA DSPLSATYGKRLDRESAREILTQRLEEGAEDDAQAKGKAAGAGSDAQAGDDQPQRIPAPR NTRETSQSPKRQDKSLLETVLSSSEVRTFTRTAAREIARGIFGTGRRRRRK >gi|294972081|gb|ADNU01000021.1| GENE 18 21430 - 22161 574 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229254338|ref|ZP_04378269.1| acetyltransferase, ribosomal protein N-acetylase [Capnocytophaga ochracea DSM 7271] # 1 238 1 234 254 225 49 3e-58 MTLNEFGQPIGPALPHWTPAPLPQPVTLEGQWCTLAPLVADQHASGLFDAYALAPDDSAW TYMKDGPFATSADYLTWARKAQVSTDPRHYVVLLKSSAEQPVAKPAGTMALMRQDPSNGV VEVGTVQFSPLLQRTRAATEAQFLLMRYVFDGLGYRRYEWKCDDLHSVSRRAAARLGFTY EGTFRNAVVYKGRSRDTAWFAITDAEWPAIRAGFERWLDPANFNADGTQIRSLAQCREEP RWV >gi|294972081|gb|ADNU01000021.1| GENE 19 22189 - 22767 574 192 aa, chain + ## HITS:1 COG:CC1900 KEGG:ns NR:ns ## COG: CC1900 COG0204 # Protein_GI_number: 16126143 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Caulobacter vibrioides # 13 177 18 182 196 129 41.0 4e-30 MIRRLVARVFWFFSSWKLRAAPAPKQPTVLIGAPHTSNWDFVLMLGIAWRLGIHMRWMGK QELFTGWKGPVMRKLGGIPVDRANPAGMVAEVVDTLRSGDNLSLVITPDGTRKGHSYWKS GFYRIARETGLPLVLGYVDRTTMTTGLGPTVVLTGDVKADMDRIREFYSDKAGFYPQHKV EPRLRDEDSFQG >gi|294972081|gb|ADNU01000021.1| GENE 20 22769 - 23215 355 148 aa, chain - ## HITS:1 COG:no KEGG:cauri_0775 NR:ns ## KEGG: cauri_0775 # Name: not_defined # Def: putative redox protein, regulator of disulfide bond formation # Organism: C.aurimucosum # Pathway: not_defined # 4 140 2 137 142 139 54.0 4e-32 MTNSEAPKPFAIELTRTAENRYVATNGKGGHIEFGRGEDLMSPVELLLAAIAGCSSIDVD TVTSRRTEPQDFTVTARSEKVTEDGDASRLGPISLNFDITFPNDEAGQRATAMIERLVKL SHDKYCTVSRTVEHGTPVTFDVASDSDA >gi|294972081|gb|ADNU01000021.1| GENE 21 23247 - 24197 726 316 aa, chain + ## HITS:1 COG:Cgl1119 KEGG:ns NR:ns ## COG: Cgl1119 COG4667 # Protein_GI_number: 19552369 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Corynebacterium glutamicum # 21 310 5 294 298 248 45.0 1e-65 MSPEPDTNSPSTTTSARANTPYHVVDDTALIFEGGGMRAALTSAVVVTLIKQGIHFNWVA GVSAGATNTANYVSQDPVRARRCFVDFAADPQFGNLRTMLAGKGLFNAEYIYENTSLPHQ ALPFDWDTFSNSGTRIRIPAFDAESGDLKVWTEDDFPTMRDLMVRVRASSTMPVIMPPTH IDGRIYVDGALGPDGGIALSQARADGFERFFVVLTQERSYKKTPQRFSEFYRRYFRRHPA IAEALLTRWKRYNETREELFELEKQGKAYLFVPERMSIGNGERSLSKLAAAHRAGMTQSR QELPAWLDFLGLPAEL >gi|294972081|gb|ADNU01000021.1| GENE 22 24455 - 25516 1206 353 aa, chain + ## HITS:1 COG:NMB0604 KEGG:ns NR:ns ## COG: NMB0604 COG1063 # Protein_GI_number: 15676508 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 352 1 353 354 476 69.0 1e-134 MKAARYYDQKDIRIEDIPEPELKPGTVAIDVAWCGICGTDLHEYLEGPIFVPPKGHPHPI SGEEAPVTLGHEFSGTITALGEGVTGLEVGQNVIVEPYIISEDVDTSEGQNYHLSENMNF IGLGGRGGGLSEKIVVEQRWVHPIGDIPLDEAALIEPLSVGHHAFVRSGAKAGDVAIVGG AGPIGLLTAAVLKAEGLTVYISELSEARKEMARSTGVADEVFDPREVDVAAKVKELTGGK GADVGFECSSVPVVLDMLMDAVRPAGVIVNVSIWGYKPEVDLPKLVLKEIDLRGTIGYAS DHPATIKLVQEGKLDLSKFITARIKLDELVDKGFDQLINNNEHHVKILVNPNA >gi|294972081|gb|ADNU01000021.1| GENE 23 25641 - 26078 506 145 aa, chain - ## HITS:1 COG:no KEGG:CE1087 NR:ns ## KEGG: CE1087 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 1 145 28 172 173 242 82.0 3e-63 MSFDVYLSGEIHTEWREEIERGATAAGLDVVFSAPVTDHDASDAAGDHLAETQTSFWRDN QSAKVNAIRTRTLIDKADLVVVRFGDKYKQWNAAFDAGYAAALGTPYITLHSADIVHPLK EVDAAALAWCETTEQVVKTLQYVLR >gi|294972081|gb|ADNU01000021.1| GENE 24 26136 - 26588 381 150 aa, chain + ## HITS:1 COG:L158463 KEGG:ns NR:ns ## COG: L158463 COG4405 # Protein_GI_number: 15672915 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 25 146 36 145 148 72 36.0 2e-13 MWVMNDSPLDLTSIPIGEYAFPGPLRDALVSAILSGEKTSTATLVEEYTRSGEPLPSPTG GELEAVIDSKGKIVCVTRTTRNYVTTLAQVSDEHARKEGEGYANAHEWRVGHERFWTSDE LVTALGDPPFTLTDDTQVLCSEFEVIEKYV >gi|294972081|gb|ADNU01000021.1| GENE 25 26607 - 27128 319 173 aa, chain - ## HITS:1 COG:no KEGG:CE1090 NR:ns ## KEGG: CE1090 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 2 168 36 202 204 203 62.0 2e-51 MSVRSPENILFYLPPDQEQQVRDIFSALNDLGLPQQNQRPHITVTFAPRMSPEVVSRAAE ILPPVVPATFTRVGTVIFGTRSKQTIAWLLETDSAVTEAAREICALNPDGRGTEWIPHLT VGLRIPRALVPDYMRGLEEVTPTRFKELTALRAAYWRPATRHYTHLAGPEPEG >gi|294972081|gb|ADNU01000021.1| GENE 26 27141 - 27746 396 201 aa, chain - ## HITS:1 COG:no KEGG:Micau_0635 NR:ns ## KEGG: Micau_0635 # Name: not_defined # Def: regulatory protein TetR # Organism: M.aurantiaca # Pathway: not_defined # 8 173 8 172 202 73 33.0 5e-12 MKGVVPVTDRREEIIQAAIELAQKEGPKAATVRAVAQHVGIGASTLRYYFPTQSDLGRAV AERLISSATPDLNIRDSSRPPHERLAECMIQFLPPSDQSVDVMVSAWVAQMARLLDPQSG EGPAQMLSRLYEVGLGRITGWLQVLADEGHIDEEDIPRAVSLLSASCDGLMFQLGAKKLS LDEAKDHVTWLSATVLQRANN >gi|294972081|gb|ADNU01000021.1| GENE 27 27827 - 28297 461 156 aa, chain + ## HITS:1 COG:no KEGG:Ksed_02840 NR:ns ## KEGG: Ksed_02840 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 152 1 150 154 174 65.0 1e-42 MLETLQEFTLSLPEWARWTGVILISAIPFVESYLGSTIGIMAGIHPAVAIPAAVIGNTAS MLLLVFGAHKLRKRVSKDDESSMGPKKAKLKRLFDKWGVPGVSLLGQTVLPSQITSMAMV SFGASRNAVAGWQFVSIVLWGVLCGSLAAAGIMVFG >gi|294972081|gb|ADNU01000021.1| GENE 28 28352 - 29107 550 251 aa, chain - ## HITS:1 COG:CC3019 KEGG:ns NR:ns ## COG: CC3019 COG0671 # Protein_GI_number: 16127249 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Caulobacter vibrioides # 116 249 127 257 259 71 36.0 1e-12 MRSFFARGQKALEPILVWIARRLGPWTVMTIVLAVGVAVLAALAKLTGEVYEEVAYENGT AHIDRLVLDFMLSMRAAWLTSVVNAYTHVGGKVGGVIVCLVLIVVLTFLMRSARPAVLLA AGALGSVCISIAGKEIVGRERPPRVDAIPPYEVSPSFPSGHTLSATAIMIVTAYLLVLWL SHTHARILAVLLCGTYAVTMGLSRVYLGHHWLTDVIAGFGVGAAWGVVVILAHQVFHTVR RVRATRRLDLE >gi|294972081|gb|ADNU01000021.1| GENE 29 29169 - 29537 251 122 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_4292 NR:ns ## KEGG: HMPREF0675_4292 # Name: not_defined # Def: transcriptional regulator, ArsR family # Organism: P.acnes_SK137 # Pathway: not_defined # 17 112 15 110 139 114 63.0 1e-24 MAMIIHEEASHENSHTELKSWATLFKSLADPHRLQIIQHLQLGEHRVADLVDHLGLAQST VSTHVSSLRKAGLLASHTHGRATYYTLAHPQETARLFKAATAALTSADTCIESSQQKDTS HV >gi|294972081|gb|ADNU01000021.1| GENE 30 29530 - 30471 914 313 aa, chain + ## HITS:1 COG:lin2720 KEGG:ns NR:ns ## COG: lin2720 COG1230 # Protein_GI_number: 16801781 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Listeria innocua # 26 312 22 301 303 215 39.0 1e-55 MSDLVKQSAHDHEGHNHSISADADCRYLWLALITLGAFMIAEVVMSFMTGSLALLSDAGH MLSDVGAIALALWTIRLVARPPKGALTWGLRRVEIISAAVNGITLLVVAGIIAVEAIRRL FEPPEVDGGPVLIVAAVGVAVNIVVAWLVARANRSSLNVEGAYQHILTDLYSFIGTMIAA LIIMFTGWVMADVIASLLVCGLMVYAAWNLLRDAGRVLLEAAPKGIDLEEITEHILELPH VQRVHDLHVWSVSTDLPALSAHVVVDDECFKDGHIPQLLDQVQDCVAGHFDIEHSTFQFE PLKHGAHEYHTHP >gi|294972081|gb|ADNU01000021.1| GENE 31 30710 - 31804 928 364 aa, chain + ## HITS:1 COG:NMA1635 KEGG:ns NR:ns ## COG: NMA1635 COG3177 # Protein_GI_number: 15794529 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 4 357 5 359 375 359 51.0 4e-99 MWNQPDEPYQDLPPLPPKQQIETPAVFRATIEASRALARLDGAYKRLPDPTMLINLIPLM EAQASSEIENIVTTNDELFKAANGALQEITPQVKEALRYREALRAGYESLQERPITTQTA VKICSHLQAAQAKIRDVSGTYIGNPTSGKHIYTPPEGKDVILGHLRAWKEFIHDNHQLDP LVVMALAHYQFEAIHPFFDGNGRTGRILNLLILIEKGLLQLPVLYLSGHIVRNKDQYYTL LNRVTQDSEWEDWILFMLAGVRSTAEWTLQLVETTDRMREETVQKIRDHNPRLPAKELTE LMFSQPYLRIDNVINAGLAKRQTASTWLNTIAEANLLTKERAGRSVLFINSELLKTLFHT PLPQ >gi|294972081|gb|ADNU01000021.1| GENE 32 32064 - 32303 453 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395048|ref|ZP_06805258.1| ## NR: gi|295395048|ref|ZP_06805258.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 79 1 79 79 85 100.0 2e-15 MSAEDKFENTADKVGGKIQEGAGKLTGDKETEARGKTEAAKADFKDKLDDAKDSAKEKFD DVKDSVKGTVDGLLGNDKK >gi|294972081|gb|ADNU01000021.1| GENE 33 32391 - 32807 216 138 aa, chain + ## HITS:1 COG:no KEGG:Haur_3193 NR:ns ## KEGG: Haur_3193 # Name: not_defined # Def: hypothetical protein # Organism: H.aurantiacus # Pathway: not_defined # 8 127 6 126 130 114 48.0 2e-24 MLHNLVDLVFDGQCGFCTRAAYAIKRLDRKARIRLHPAQRPGVHERFSLTEADTQEAAWA FTHDRSAAGAESINLVLDVTFGTRLFTQFYRLPGIRNLQDLAYTWVAQHRYLLRGTTPWC QSHPGDCHLGTQTAHCSL >gi|294972081|gb|ADNU01000021.1| GENE 34 32890 - 33534 325 214 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395050|ref|ZP_06805260.1| ## NR: gi|295395050|ref|ZP_06805260.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 214 9 222 222 381 100.0 1e-104 MKLFRACLAVAAIITLAGCGSAQQSGGESTVESQSQSTEKSDATPSTAAPTKNSDIVDSK STKKKPSKPKTPFAEHFGGPKVNKADFHEKLMYSNQDAYYFQAPSQVHFCMITPEEVGCM SNRFPADVPMVPAADGAPEKQPANAIHLPAGKKGEMFAISDAAYINHQGSTTVLEYGKVL AVSGFECTTNKELGVICRSNSHGIQFSSKKHTEW >gi|294972081|gb|ADNU01000021.1| GENE 35 33655 - 35169 579 504 aa, chain + ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 5 336 3 342 563 104 30.0 3e-22 MEWTPETLNSTLAQLRDRRGDSTTIEVKRSTGGVPSMAETLCAFANMPNGGTVILGVDEG DAEFTIVGVQDIAQLEAGLVSSARHRVRPEPHIEFKTIEVGKKRVLIATVSPLPLADKPA RVGDRAYLRQADGDYPMHAHEERMIEVARLHSDEQVNYDLEPAKGRDRNDLNKNLTEWYV SEVRSRDRRLANESDEQILRLTNVLTASGEPTLAGLYALGDYPQGQYPALTVTAAVQLAG GEGQARNRNLQDFTGPLPVLLDELLQWVEHNLHTDHVYRDDGHLETVPELPLNAVRELLA NALVHRDLGPNTLGTGKQIQIRMTDKSLFVQSPGGLRGVSLAQLESIEHAQAAVNQRLYH IAKRLTTRDGASIIEGEGGGIREVFRSTKQRGLRDPQLVDTGVQFKALLWRPVNALHSQT RNNQQHSLDHSRGRETVASSSSPTKNEATVLGALAMGPLDIHALAEASNLTIGQVRYALR RPLQENIVAMEGRQGIKSTRYSLT >gi|294972081|gb|ADNU01000021.1| GENE 36 35595 - 35924 343 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395052|ref|ZP_06805262.1| ## NR: gi|295395052|ref|ZP_06805262.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 109 1 109 109 181 100.0 1e-44 MTLWTLSNDWFDRHTSQDLAYRVRVRALTPGALDTAWARIVEEHGADEDGVVSIGGAALI RVNDREAEAISGGEDALDSLDWAVNDVLGEALKGAEVLVVAEERSLVVD >gi|294972081|gb|ADNU01000021.1| GENE 37 36181 - 36651 274 156 aa, chain + ## HITS:1 COG:no KEGG:Celal_0215 NR:ns ## KEGG: Celal_0215 # Name: not_defined # Def: hnh endonuclease # Organism: C.algicola # Pathway: not_defined # 5 151 1 149 269 84 34.0 1e-15 MLNGVSTFLLTWNPVYGGLGESTIRRNVELTAQGKRVPGRWNTGGTTRKIQPGDRVFLLV LGSSDHGIFASGFVTSEVYKEVHWNDPRKLANYVNLEWDEFLEPADVLPGDLLQTVFTVN RWRPRSSGTQIVQGRENELERMWSEHVQEVRSTNTA >gi|294972081|gb|ADNU01000021.1| GENE 38 36682 - 37032 205 116 aa, chain + ## HITS:1 COG:no KEGG:AMED_2075 NR:ns ## KEGG: AMED_2075 # Name: not_defined # Def: glyoxalase/bleomycin resistance protein/dioxygenase # Organism: A.mediterranei # Pathway: not_defined # 5 111 2 112 117 122 52.0 5e-27 MSQAAFTVRQITFDCHNPSKLAEFWSAATGREIVADYGDFVMVNSTPALGFQRVERPTPG KNRMHIDIGGAEREALVERLTSLGATALSDHKAPGLVWTVMQDPEGNEFCVGNPDF >gi|294972081|gb|ADNU01000021.1| GENE 39 37224 - 37529 331 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395055|ref|ZP_06805265.1| ## NR: gi|295395055|ref|ZP_06805265.1| XRE family transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] XRE family transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] # 9 101 1 93 93 145 98.0 1e-33 MRALTPGALDSAWARIADEHGTNEDGVVPIGGAALIRVNDWEAEAISEGEEALDSLEWAV NDALGEALKGAEALVVAEENAITADTALRLGRYFGMGLNSG >gi|294972081|gb|ADNU01000021.1| GENE 40 37853 - 39385 808 510 aa, chain - ## HITS:1 COG:PM1540 KEGG:ns NR:ns ## COG: PM1540 COG4823 # Protein_GI_number: 15603405 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 10 250 6 229 309 134 36.0 3e-31 MTLPESSYAKPFLTVPEQVRRLRERGMDCGDDAYAAEVLERYGYYRLSGYWHIYRDRPAH PAAQYDDGGREIRLNTFITGASLSRVVALYEFDHELRTRLGDVLSTIEVAIRFFIGHQLG KADKFAHRVPDALDAVRGAKQCPHAVLTNKYRDWLKEYNRDEKRARGDFVAHFREKYGPH LPIWVATEVMSFGVLSNLYRLMRQSDKKILAARFQVHAADGRGDCKALANWLNSLRNVRN ICAHYGRVWNRTFDVIIDVPGQARRSEGDRLAPLADDGVNNRLYGVLLVMRHLMLSIDPG NTNVVDLTDYIDKQSQILDFDMRQLGFPANWKDSLIWDPTFALDRSPMMAASLLDRTESL TAPNAREALTSAEPKPKTEPRTLDQQAAATRAAQKSLLRKYLQDQTVIEIELGGTKYYPA FQFRDGKIIDALADINQKLALSCGDAERTVVAKALLDWWLTPHPSLLRGTTGAHQSPLDL LNDLPEADFAEVVRATDVLSSFVVPGPGSV >gi|294972081|gb|ADNU01000021.1| GENE 41 40040 - 41047 127 335 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395057|ref|ZP_06805267.1| ## NR: gi|295395057|ref|ZP_06805267.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 335 1 335 335 644 100.0 0 MLEYLTIALIVAGRLTFSIFYLLREAIFSVFVLYVLLGTAWTLRPYWFTTSIDSLRRWVQ GWDPATVPAAVGFFATVLGLLAAYAFSTKRRARYKSMFDAAVAAENTLTVLGPRARKAAV EIAKFTHTIALHDRFFCETTIDNLSNGRLQLQNGRVKMINDDRPYAAGRSWQRSREKWDT LCEQRETTLDALKTLLDALSQVESLIPFARQAGKHSWSLLSDSYRQSHSANPWPAITSYS EQRYEQDRDDLRVLVNRALKDRTSSTVGNGNATVDVQELHLEMIEATVERLQSSSRIRIW YLAGLYAKLVLCEEEIHRSRSLRGINTFLARIIRH >gi|294972081|gb|ADNU01000021.1| GENE 42 41300 - 41761 56 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395058|ref|ZP_06805268.1| ## NR: gi|295395058|ref|ZP_06805268.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 153 3 155 155 288 100.0 7e-77 MTIFCIIPACFIVIVSIVCAVFAVALFKTPTQRKPAAGVVVDNIEGESDGHKVWTPLAKF TDHYGRTQHGRLDFYQTPARPLGSTIRVRFDPLHPTDVKQSARRLAVTLAVSFGSVGHSD PGFRRMQFLTTSSTAYRHPTTTPTQAAVTVVAN >gi|294972081|gb|ADNU01000021.1| GENE 43 41974 - 42183 78 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHAKNPDAQALVPATRWEFVGIGAVCGENASLLFAIDSRVPWNASFVVQEGLLNAPRDES VRKTVLKPQ >gi|294972081|gb|ADNU01000021.1| GENE 44 42077 - 42550 379 157 aa, chain + ## HITS:1 COG:no KEGG:Bfae_21830 NR:ns ## KEGG: Bfae_21830 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 24 156 13 148 149 94 45.0 1e-18 MANSNDAFSPQTAPIPTNSHLVAGTSAWASGFFACIPIPFLSSIVAGIIMLVVGLSQRKQ GGVAAQNGVNAANWGVLQLAIPLLFFSTMTVGLLTGEKTETGVRMHGGMEAALLAIGILW FLTSAAHLVVTIIGTIKARNGETFRALAPQIFKAPKK >gi|294972081|gb|ADNU01000021.1| GENE 45 42798 - 43154 355 118 aa, chain - ## HITS:1 COG:no KEGG:Svir_21380 NR:ns ## KEGG: Svir_21380 # Name: not_defined # Def: hypothetical protein # Organism: S.viridis # Pathway: not_defined # 13 118 13 118 119 110 59.0 2e-23 MTLIPTSWTLPALLAAVLLGDVALSIKPVRFIRDCLHSVHFPENWWWSLLVIKLLAAGGL IAGIWVPGLATAANAGVIAYFLCAAVGHIRAKATGSAFWINCLGMLVLSCVTLALSFL >gi|294972081|gb|ADNU01000021.1| GENE 46 43151 - 43744 336 197 aa, chain - ## HITS:1 COG:no KEGG:Lxx19580 NR:ns ## KEGG: Lxx19580 # Name: tetR # Def: TetR family transcriptional regulator # Organism: L.xyli # Pathway: not_defined # 1 191 2 183 189 121 43.0 2e-26 MVGIRTAARTETRRFVLEAADRLFHNRGFQATTVRDIAREAGVSAGTVMSVGDKEALLVK LFDGLIAERQDHADAQNYAADARCGADAVAVVDPFVALFDERRSLAQAYASILVSGRHTS VVFTDLAQKLTAVLQQVITACGCANTTEAPERAEALHAAYIGSLFIWASTPETTARQFLT QLRDIFATICPHTGGDS >gi|294972081|gb|ADNU01000021.1| GENE 47 43957 - 44328 179 123 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395062|ref|ZP_06805272.1| ## NR: gi|295395062|ref|ZP_06805272.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 123 1 123 123 257 100.0 2e-67 MPLTLSDKTQSSIQEACTHVSHYVHRFGKRVVVWGPVVAAQNGWINSGYREEELPAVLVR EKFIAEVLGRVYLKKFADLNPGDRGSFHFIVEGVFRMTKHDTPWVTLESPNHLALLPDPS AGG >gi|294972081|gb|ADNU01000021.1| GENE 48 44398 - 44706 188 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395063|ref|ZP_06805273.1| ## NR: gi|295395063|ref|ZP_06805273.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 102 1 102 102 188 100.0 1e-46 MRMTFPAPGIVSAPPLRHRWSYSVNDGGPIGFGAVKTEHEFAGIVPDRFIFPLFAFKDGL FGFRRFFGAERGMLIGVEKGRPAIDAARAEVDRSSTCMVGAG >gi|294972081|gb|ADNU01000021.1| GENE 49 45019 - 45192 71 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395064|ref|ZP_06805274.1| ## NR: gi|295395064|ref|ZP_06805274.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 57 1 57 57 106 100.0 6e-22 MVSIRGRLFEVLDRAVSDHWEDGLLADKNGVSAIATIVGVFFVVPRLPVAMSRKRKH >gi|294972081|gb|ADNU01000021.1| GENE 50 45191 - 45445 98 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRISMASDGNDSDMRHAVQQRAYSLIDRLSHKIALISVRSSKVKYLAVPFHACSRIPPV MRLYLITERNETPISSPNSSYVFP >gi|294972081|gb|ADNU01000021.1| GENE 51 46160 - 47881 1385 573 aa, chain + ## HITS:1 COG:Cgl0846 KEGG:ns NR:ns ## COG: Cgl0846 COG0659 # Protein_GI_number: 19552096 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Corynebacterium glutamicum # 34 551 2 513 518 350 45.0 6e-96 MTHPRAVSKEGFGARALRFAPRRSDWSRATIGRDLSAGLMVALVALPLALGFGVASGVGA AAGITTAIVAGILAAVFGDSNVQVSGPTGAMTVVLIPIVAAHGADGVLVVGVLAGLMLLL LAITGAGRVMKYMPLPVVEGFTAGITVIIGLQQLPAALGVEAEGEKVLRLAWDAITAWLA APAWQAPVMTLAVAAGIVIAARVRSGFPAALVLVAIATAINMLADSGLKTIGYIPSTLPA PRWPQIPWEHLDSLLLAAVAVAALGALESLLSATVADAMTVGDRHDPDRELFGQGIANVV APLFGGIPATAAIARTAVNVRAGAGSRLAAVFHSLLLLVAVLVAARWVGEIPLAALAGVL IATAVQMIHPRNIGSVMRATKGDGATLLITATATVVFDLVVAVLIGLVVAGFFALRDTAR TAVFEATPLDEGDHRDAERELLDKQIAAFRLEGPLFFGAAHDFLLELAEVSWVKVVVLRM RYVTTIDATGAQMLADTIERLERGGTRVLLAATKPEHVPVLRELGVFDQLAHENHAFDNT LDAIAHARMHVARIQHEESEGAPEAPRSDQHDE >gi|294972081|gb|ADNU01000021.1| GENE 52 47953 - 48378 191 141 aa, chain - ## HITS:1 COG:XF1589 KEGG:ns NR:ns ## COG: XF1589 COG1487 # Protein_GI_number: 15838190 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Xylella fastidiosa 9a5c # 1 137 1 136 142 92 36.0 2e-19 MIVLDTNVISEIFRPSPEPRVVEWLASLTGDVAITSITLAELLAGVRRLPEGRRKDELAH GIEEAVAPYRASRSLLVFDADAAERYAEVLASCEAAGAPVSTADAQIAEICLAHGATCAT RNVKDFQHTGVKLVNPWDMDA >gi|294972081|gb|ADNU01000021.1| GENE 53 48375 - 48608 245 77 aa, chain - ## HITS:1 COG:no KEGG:Caci_0629 NR:ns ## KEGG: Caci_0629 # Name: not_defined # Def: hypothetical protein # Organism: C.acidiphila # Pathway: not_defined # 1 76 1 76 79 62 51.0 6e-09 MASIIVRGLDDHVKQQLASQAKEHGRSMEAEVRDILTKAVRRPHIGMALLDVARDVGGVD ELPIPTRDDVARVAYFE >gi|294972081|gb|ADNU01000021.1| GENE 54 49198 - 49443 208 81 aa, chain + ## HITS:1 COG:no KEGG:cauri_0024 NR:ns ## KEGG: cauri_0024 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 80 1 80 81 108 78.0 5e-23 MKTINGQPVSEEQIDAWVTETENGYDVEALRRRGRKPRDKDAAKVISIRLSASEIADLDK YAAANGWSRSQAIREALKNAI >gi|294972081|gb|ADNU01000021.1| GENE 55 49395 - 49679 139 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVEVAGNPRSVKECHLEVEVRQSATKHSIKPEDSIATTLRGRHRSDNSLDEDSQATSHSA RLVVDAAYTAPATYTLALNSTDSSWYLTSTPSYL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:09:49 2011 Seq name: gi|294972017|gb|ADNU01000022.1| Brevibacterium mcbrellneri ATCC 49030 contig00024, whole genome shotgun sequence Length of sequence - 73572 bp Number of predicted genes - 65, with homology - 61 Number of transcription units - 33, operones - 15 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 36 - 593 753 ## SGR_1947 hypothetical protein + Prom 698 - 757 1.7 2 2 Op 1 . + CDS 932 - 2503 996 ## COG2272 Carboxylesterase type B 3 2 Op 2 . + CDS 2500 - 3261 705 ## Ndas_5368 membrane-associated protein 4 3 Op 1 . - CDS 3330 - 5450 1730 ## COG0514 Superfamily II DNA helicase 5 3 Op 2 . - CDS 5457 - 6674 457 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism 6 4 Op 1 28/0.000 + CDS 6892 - 7854 965 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 7 4 Op 2 24/0.000 + CDS 7869 - 8885 1088 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 8 4 Op 3 30/0.000 + CDS 8888 - 10438 1222 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 9 4 Op 4 . + CDS 10451 - 11851 794 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 12023 - 12049 1.0 + Prom 11890 - 11949 2.5 10 5 Op 1 16/0.000 + CDS 12132 - 13142 688 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 11 5 Op 2 15/0.000 + CDS 13142 - 13786 490 ## COG0307 Riboflavin synthase alpha chain 12 5 Op 3 18/0.000 + CDS 13783 - 15093 1098 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 13 5 Op 4 . + CDS 15090 - 15548 462 ## COG0054 Riboflavin synthase beta-chain 14 5 Op 5 . + CDS 15567 - 16265 544 ## gi|295395083|ref|ZP_06805292.1| conserved hypothetical protein - Term 16101 - 16149 0.2 15 6 Tu 1 . - CDS 16269 - 16679 191 ## gi|295395084|ref|ZP_06805293.1| conserved hypothetical protein - Term 16727 - 16771 5.5 16 7 Tu 1 . - CDS 16874 - 17422 528 ## gi|295395085|ref|ZP_06805294.1| FptB family protein 17 8 Op 1 4/0.000 + CDS 17482 - 18336 717 ## COG1562 Phytoene/squalene synthetase 18 8 Op 2 . + CDS 18329 - 19837 721 ## COG1233 Phytoene dehydrogenase and related proteins 19 8 Op 3 . + CDS 19798 - 20145 210 ## cg0719 C50 carotenoid epsilon cyclase 20 8 Op 4 . + CDS 20142 - 20492 363 ## CE0638 C50 carotenoid epsilon cyclase 21 8 Op 5 . + CDS 20492 - 21373 710 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 22 8 Op 6 . + CDS 21370 - 22353 1041 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 23 8 Op 7 . + CDS 22404 - 23591 1296 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 23609 - 23650 7.8 24 9 Tu 1 . - CDS 23678 - 24628 806 ## COG5006 Predicted permease, DMT superfamily - Prom 24704 - 24763 2.6 + Prom 24663 - 24722 2.3 25 10 Op 1 . + CDS 24788 - 25717 760 ## COG0583 Transcriptional regulator 26 10 Op 2 . + CDS 25711 - 26385 250 ## gi|295395095|ref|ZP_06805304.1| conserved hypothetical protein 27 11 Op 1 . - CDS 26366 - 26695 418 ## COG1760 L-serine deaminase 28 11 Op 2 . - CDS 26777 - 26956 114 ## 29 11 Op 3 . - CDS 26866 - 27135 138 ## + Prom 26885 - 26944 2.8 30 12 Tu 1 . + CDS 27065 - 28468 1657 ## COG2031 Short chain fatty acids transporter 31 13 Op 1 . - CDS 28472 - 29134 367 ## COG2094 3-methyladenine DNA glycosylase 32 13 Op 2 . - CDS 29134 - 30723 1641 ## COG1760 L-serine deaminase - Term 30816 - 30864 13.0 33 14 Tu 1 . - CDS 30875 - 31264 574 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 34 15 Tu 1 . + CDS 31263 - 31382 59 ## + Term 31606 - 31645 3.1 35 16 Op 1 . - CDS 31364 - 32500 1564 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 36 16 Op 2 . - CDS 32528 - 35500 2964 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain - Prom 35699 - 35758 1.8 37 17 Tu 1 . - CDS 35831 - 37489 1555 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold + Prom 37734 - 37793 2.9 38 18 Op 1 6/0.000 + CDS 37822 - 38802 1185 ## COG4607 ABC-type enterochelin transport system, periplasmic component 39 18 Op 2 11/0.000 + CDS 38828 - 39937 1153 ## COG4606 ABC-type enterochelin transport system, permease component 40 18 Op 3 10/0.000 + CDS 39934 - 40968 867 ## COG4605 ABC-type enterochelin transport system, permease component 41 18 Op 4 . + CDS 40965 - 41975 208 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 42 19 Op 1 . - CDS 41994 - 42896 991 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 43 19 Op 2 . - CDS 42905 - 43306 352 ## gi|295395109|ref|ZP_06805318.1| conserved hypothetical protein 44 20 Tu 1 . - CDS 43538 - 43927 498 ## Asphe3_03420 universal stress protein UspA-like protein 45 21 Tu 1 . - CDS 44203 - 45432 953 ## COG0579 Predicted dehydrogenase 46 22 Tu 1 . + CDS 45500 - 46723 727 ## COG2189 Adenine specific DNA methylase Mod 47 23 Tu 1 . + CDS 46841 - 48316 1608 ## COG0531 Amino acid transporters + Term 48318 - 48378 1.7 - Term 48305 - 48364 12.1 48 24 Tu 1 . - CDS 48368 - 49834 1095 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Prom 50071 - 50130 1.8 49 25 Op 1 . + CDS 49922 - 50641 724 ## Gobs_3694 hypothetical protein 50 25 Op 2 . + CDS 50634 - 51566 734 ## COG0796 Glutamate racemase 51 25 Op 3 . + CDS 51613 - 52269 744 ## Namu_4892 hypothetical protein + Term 52317 - 52369 12.6 - Term 52438 - 52476 2.0 52 26 Op 1 9/0.000 - CDS 52499 - 54838 2235 ## COG0620 Methionine synthase II (cobalamin-independent) 53 26 Op 2 . - CDS 54835 - 55893 622 ## COG0685 5,10-methylenetetrahydrofolate reductase 54 26 Op 3 . - CDS 55901 - 56953 1061 ## COG3491 Isopenicillin N synthase and related dioxygenases 55 27 Tu 1 . - CDS 57111 - 58289 1059 ## COG0285 Folylpolyglutamate synthase - Term 58406 - 58453 14.4 56 28 Tu 1 . - CDS 58481 - 60250 1703 ## AARI_32240 putative RNA polymerase sigma factor - Prom 60402 - 60461 3.2 + Prom 59970 - 60029 2.0 57 29 Tu 1 . + CDS 60195 - 60362 62 ## - Term 60410 - 60449 2.7 58 30 Op 1 . - CDS 60647 - 61414 531 ## COG1414 Transcriptional regulator 59 30 Op 2 . - CDS 61414 - 62787 1101 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 60 30 Op 3 . - CDS 62784 - 64004 1045 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 61 31 Op 1 6/0.000 - CDS 64124 - 65710 1555 ## COG2986 Histidine ammonia-lyase 62 31 Op 2 5/0.000 - CDS 65751 - 67052 1156 ## COG1228 Imidazolonepropionase and related amidohydrolases 63 31 Op 3 . - CDS 67060 - 68754 1843 ## COG2987 Urocanate hydratase - Prom 68790 - 68849 1.6 - Term 68883 - 68946 22.3 64 32 Tu 1 . - CDS 69016 - 70752 640 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 70826 - 70885 3.3 65 33 Tu 1 . - CDS 71117 - 72550 1548 ## COG1457 Purine-cytosine permease and related proteins - Prom 72662 - 72721 3.7 Predicted protein(s) >gi|294972017|gb|ADNU01000022.1| GENE 1 36 - 593 753 185 aa, chain - ## HITS:1 COG:no KEGG:SGR_1947 NR:ns ## KEGG: SGR_1947 # Name: not_defined # Def: hypothetical protein # Organism: S.griseus # Pathway: not_defined # 51 183 74 207 216 134 57.0 2e-30 MTGANIVKTITRITTSTAIATGILAAGVLATGPAMATEGTKPAFPDAQAVAAADLSPEQV ENAKTIIQVGKDNGISRQGIKIALMTASQESNLINVNYGDRDSLGLFQQRPSAGWGTPEQ VQDPVFAAKSFYGVNPEVSPNGLLQIQGWEQMAPGDAAQAVQVSAFPDAYAKWEGQADEL LNQYF >gi|294972017|gb|ADNU01000022.1| GENE 2 932 - 2503 996 523 aa, chain + ## HITS:1 COG:BS_pnbA KEGG:ns NR:ns ## COG: BS_pnbA COG2272 # Protein_GI_number: 16080492 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Bacillus subtilis # 5 485 6 460 489 208 35.0 2e-53 MNLTVTTTSGTFEGTTSRDTRRWTGIPYAHPPVGADRFQAPRPFEAAPNTAPLPATRFSN PVPQFNPMGDGPKRTEDPNWLTVNVWAPLEPVENAPVMVWIHGGAYVEGSAANPLYIGAV FAQMSVVFVSVNYRLGIEGFMEFPDAPSNRGLLDQAQALRWVRENAQAFGGDPANVTVFG ESAGAGSIHCLLVMPEAQGLCDRAILQSPPAMVLEKELAQDVTAEFAAHAAQMGLPVTEP TAQSFTNLTPEQGEELMVAFSQGQGRYFPRWGKAAAFTPPLIPAVDGTVLPADPWSLPLP DGVDVLVGHTRDEFRLFTNLMNAEVTQQRAYERVGMVGPGSQLLENAQSGTGDLEAAQSQ ARELSMKYVKALGDVTPEQLFEWVQTDYMFTVPTLLVADAAQKRGTPAYSYLLAVDPDGG MGSPHVADLPPLFDSFRSFHGHMLYPNPTEADHALGQRMREAWVQFARTGNPGWEPWTRE HPTTRVFGYEDRTCPHPFMDRFTAFDHAPSRALPLLGSNERAS >gi|294972017|gb|ADNU01000022.1| GENE 3 2500 - 3261 705 253 aa, chain + ## HITS:1 COG:no KEGG:Ndas_5368 NR:ns ## KEGG: Ndas_5368 # Name: not_defined # Def: membrane-associated protein # Organism: N.dassonvillei # Pathway: not_defined # 14 251 51 287 333 149 37.0 8e-35 MTEPNNASPNEQPSSQSRAQADSQAQGTDPRPQSFKDLKPWEGEARTGDKVLLWFLFGVP AFYMVLLPLRPFLIAKIPTVLALITGARTVIAGAGAFAAVESRSLTLVILAGLFGMLKFD WLFWLAGKMWGEGVLRLYATTPAQRRQFEKIKRMPRWLLYLMLFFSRFPGVPGPIVALIA GWSRVRFLPYFLVTAAGALVMSIALATLGYVIGQPAVDVLKVVDKYAIFISFALIFGLVG WSSFRSNKKRQAS >gi|294972017|gb|ADNU01000022.1| GENE 4 3330 - 5450 1730 706 aa, chain - ## HITS:1 COG:Cgl0869 KEGG:ns NR:ns ## COG: Cgl0869 COG0514 # Protein_GI_number: 19552119 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Corynebacterium glutamicum # 3 706 8 683 683 611 50.0 1e-174 MRAREILTELTGNPDAQFRDGQFEAIESLVEQRSRVLVVQRTGWGKSAVYFVAARLLREQ GEGPTLIISPLIALMRDQVAAATRAGVKALTINSANATEWDEVVEQVRAGDVDVLLISPE RLTNPTFVNTVLTPLENTLGMIVVDEAHCISDWGHDFRPDYRRIGALLEHLPANTPVLAT TATANSRVVDDVAAQLGHNTRVIRGPLSRASLRLGVAQTTSAAHRIAWLTEHLNDFTGSG IIYTLTKSAAQDIATALSHAGHTVAAYTGGTDPEERIELEDALKGNALKALVATSALGMG FDKPDLGFVIHVGAPSSAVAYYQQVGRAGRATDSADALLLPGHDDENVWEYFANATMPNE QDATAVLDALGDEPRSVPALEPLVGIKRNRLELLLKVLTVDGAAQRVRGGYVRTGVPWTY DAERYAAVAQTRADEAREMLAYEKTTQCRMVFLAGTLDDGTATACGRCDTCAGVWWNESV SAQAQTVARSELDRVGLIIEPRKQWPAHLNRIGVNLSGKIPADQQCEPGRAVARLSDLGP GQVLREFLAPGAPDQPIPNHIGQLVTQVLAQWGWKADGGEGSGNGSGLEGSAPPRPQVVV AVPGFTRPNAVESLARGIATTGRMEYAGALDALKDPGSPDVNSPFRVKNLHDAFAVSPEL AARVKGRAVLLVDAEVVSRWTFAITGRLLREAGATSVLPFALAQRG >gi|294972017|gb|ADNU01000022.1| GENE 5 5457 - 6674 457 405 aa, chain - ## HITS:1 COG:BH1826 KEGG:ns NR:ns ## COG: BH1826 COG3284 # Protein_GI_number: 15614389 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Bacillus halodurans # 32 265 14 239 623 97 30.0 3e-20 MVKYPWAEPAFGFDDDPKERADQLRPIHTSAVRHGAHGRANGPRPRPVIEASWQRVRKAG VRQGTPDPQINPDSVPEAFDGIQETHAIDAKALIDFITHAFAPALANSQLVGVLALEGSH VAMRFGSRSAIAHADSIGMVPGALWSETGVGTNAIGITALTGRPTQVHGPEHWCVDQHDW SCSAAPVRNPATGRPIAVLDVSGPVSQSHPAVLGLVQSVASQVELMMEVEHRRRLDALRV KVLPQFQHSGGPLILCDRNGWVLGAIGVEAPDKLDLNAVNDEAVHLVPGIGPASLTVNDD VVVVTPLEQAVNRAEYVLNPVTNELRFVDNNGESVFSLSPRHCAILLCLMHATRPLDVHD IAREVWRSAEVSPVTVRAEMSRLRKRFPHLVSEAPYRVLSTVHIG >gi|294972017|gb|ADNU01000022.1| GENE 6 6892 - 7854 965 320 aa, chain + ## HITS:1 COG:BS_acoA KEGG:ns NR:ns ## COG: BS_acoA COG1071 # Protein_GI_number: 16077873 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Bacillus subtilis # 4 320 12 328 333 330 52.0 2e-90 MEPTKEQLIGAYDKMSKIRAFEDRLHKENLTGDIPGFIHLYAGEEAIAVGMCENLTPADK IASTHRGHGHCIAKGSDVTKMMLEIFGAQDGLCHGKGGSMHIADLDTGMLGANGIVGGGP PITVGAGLTAKYRGEGHVAVSFTGDGGSNQGTTFEAINMAVVLQLPVIFVFENNGMGEAT GAEFAVGSKDIASRAAGFGLPAVTVDGNNFFDMYQASREAVHRARNGGGPTVIEAVSYRY YGHFEGDPGLYREQDQVAQYKAKNDPLQIFRAQVEGQISAEELDKIDESNIELVDEAVKK ARAAKQPDPSEVHTDVYVSY >gi|294972017|gb|ADNU01000022.1| GENE 7 7869 - 8885 1088 338 aa, chain + ## HITS:1 COG:PA4151 KEGG:ns NR:ns ## COG: PA4151 COG0022 # Protein_GI_number: 15599346 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Pseudomonas aeruginosa # 3 338 4 335 339 357 56.0 2e-98 MAEMSFREAIRNAMADAMREDNDVVLMGEDLRGGKGGTNPDPDVEAFGGVFGVTEGLWTE FGDDRVIDTPITESAIMGLAAGSALTGLRPVAELMFMDFFGVCYDLIYNQAAKFRYMFGG KATTPLVIRGIIGAGVGAAAQHSNSPYHLFTSTAGVKCVVPSNAYDARGLLLESIRDDDP VIFCEHKMIYDMKTEVPDDPYTIPLGVASYPRRGTDVTVVALAQCVNYATQVADKLASEG ISVEVVDPRTTSPLDEDSILESVAATGRLVVADESANRCGFAHDIAALVANKGFSSLKAP VQLVTPPHTPVPFSAPLEQAWIPGPSKIEAAVRAVVEA >gi|294972017|gb|ADNU01000022.1| GENE 8 8888 - 10438 1222 516 aa, chain + ## HITS:1 COG:SPCC794.07 KEGG:ns NR:ns ## COG: SPCC794.07 COG0508 # Protein_GI_number: 19075255 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Schizosaccharomyces pombe # 9 516 58 483 483 200 31.0 6e-51 MSTITGLFVPKWGMTMDEGTLTEWLVNEGDEVSAGTAIASMESSKISGEIEADEAGVLAK QVLSIGETAPVGALIGVIGGADTPAEDIDKFVSEHSSAAPEEAPEPSSNEPAKESTKKQE PAPKAEKPAPAPKAKKPSKASAGKVNIPQELRGFDSAPATEHALDLSRKHDIKLSSVTPT GRADRVTVADLVEAVKQAGGSLTFGNDRERVNFVPHVGDDADVPATEHARDKAEELGVNL RDCRPTGRAGRITVEDVVAAHSRLSGGSQDTSADSTADPKTTSAVSNSAQEVPMSQMRQV IAGRLKESYLESPHFRVTAHANIDKLLEFRREVNAQRRDLKVSVNDLVVAAVARALVAVP EMNAQFDAEENVIRQFEHADISVAVATEEGLITPIVTHADTRTISDISSIMVDLATRAKA GQLKPDEFQGGTFSVSNLGMFGVSHFDAIINPPQVAILAVGSASRQFVPDDNGEPVAANL LPLTVSADHRVIDGATNARFAAELKRLLESPSLIVV >gi|294972017|gb|ADNU01000022.1| GENE 9 10451 - 11851 794 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 8 458 4 451 458 310 37 1e-83 MHSENDSFDVIVIGAGPGGYVAAGRAAQLGLRTAVIERAELGGICLNWGCIPTKALLHGA EVARTLRTSAQVGVAVGEVDIDYSALVAHSRQTSQTLTSGIAGLMNARGVTVLAGTATVA GKGQVDVEMESETRHLRATHVVIATGASPRSLPGIEPDGDRIWTYRDALATTEIPSSLVV VGSGAIGSEFASLFADMGSDVTLLEAADDFLPAEEKAASSQVQKAFEAKGIDVRTGVTVN GVNAHADGVDVEVDGETITAERVLLAVGVQPNSAGLGLEEFDVCDERGFIRTDAFGKTEA WGLYAIGDVAGGPMLAHKASHEALVCINALAGFDRTPPAKDWRAWVPRCTYTYPEVASIG LSAQQATEQGYSPVARPIRFAENGRALGTTETDGFAQVLVDEASGEILGGSIVGHDATEL ISLLSVAHATGADAEEFTHAIIPHPSLAESVHESVLSALGRPVNSM >gi|294972017|gb|ADNU01000022.1| GENE 10 12132 - 13142 688 336 aa, chain + ## HITS:1 COG:Cgl1559_2 KEGG:ns NR:ns ## COG: Cgl1559_2 COG1985 # Protein_GI_number: 19552809 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Corynebacterium glutamicum # 154 335 3 186 188 115 42.0 1e-25 MEALHSATRAALGAATRGVRGANPLVGAAVLWDDGTFTTGYHQGAGTPHAEPDAIRNASP RSTTGATLVVTLEPCSHTGRTGPCTQAIIDAGITRVVIASRDPNPQASGGAQTLTEAGVE VLFLNDLGQSWAHEVATQAHRLNARWFTAVTHDRPFITAKIAQSLDGCVAARDRTSQWIT GAESRAHAHLTRARVDAIAVGTGTAHADNPRLTARTGDSPHQPIPVVFGTTALPGDSHLG RNPRTLTYSEVGAGLRDLRRRGVSHLLLEGGPTLMAHFLQHDLVDELHVYTAPLLLGDGI RAPLSVDTLAQGLRFVPDAPPEALGSDTFTRFMKEV >gi|294972017|gb|ADNU01000022.1| GENE 11 13142 - 13786 490 214 aa, chain + ## HITS:1 COG:ML0558 KEGG:ns NR:ns ## COG: ML0558 COG0307 # Protein_GI_number: 15827209 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Mycobacterium leprae # 1 206 1 198 207 150 46.0 2e-36 MFTGIVQKVVPVHAAEHRDGYARIVLETGELTADLPPGGSLAVNGVCLTETESPASAGRF TAHVMEETLRLTNLGALGAGSFVNVERCLAMTDRLDGHIVQGHVDAVGEVLAVTELAGSR IVRVSVPEHLAPLMAVKGSVALNGVSLTVTAVSDARPGAGVGPAHWVEVSLIPATCENTT FGTAQVGDLVNIEADVVARYTARLNQFGTTKENS >gi|294972017|gb|ADNU01000022.1| GENE 12 13783 - 15093 1098 436 aa, chain + ## HITS:1 COG:aq_350_1 KEGG:ns NR:ns ## COG: aq_350_1 COG0108 # Protein_GI_number: 15605862 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Aquifex aeolicus # 17 210 8 203 211 214 53.0 2e-55 MTVLDAALNTNASNPVELDSIDLAIAELKRGRPIVVVDDEDRENEGDLIMPAHTVTPEWM GFMVRHTSGVICVPMLPERAAELDLRPMVANNQDPKGTAYTVSCDAAAGVSTGISAADRA HTANLLANPGSNTSDFTRPGHMFPLIAKPGGVRERDGHTEAGVEFARLAGFEPVAVIAEI IHDDGSMMRTPDLRRFADQHELALVSIHDLAIWLNAHDATPHPRAGQCQVTGTSAVDLPT PWGTFSMRAWTGPSGAEHVTLERPGPAEAAGHPGDHQDTPLVRVHSECVTGDVFGSMRCD CGEQLHESLRLISDHGGLLVYVGGHEGRGIGLANKVRAYALQDEGLDTLDANTRLGLPAD ARSYAEVAAVVRACGLTRVRLVTNNPDKVAGLQEHGVSVVERVPVEVPATAHNARYLWTK AQRMGHILNTHERVGA >gi|294972017|gb|ADNU01000022.1| GENE 13 15090 - 15548 462 152 aa, chain + ## HITS:1 COG:Cgl1556 KEGG:ns NR:ns ## COG: Cgl1556 COG0054 # Protein_GI_number: 19552806 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Corynebacterium glutamicum # 2 152 3 154 159 132 51.0 2e-31 MKTGGPVIDVVKQSARVAVVAAQWHHQIMDGLIAGAVRAAEEAEVEVELFRVPGSFELPV VAQAAAAQFDAVVALGVVIRGETPHFDYVCSAVTDGLNHVSLDARVPVGFGLLTCDTEQQ AIDRAGGPGASEDKGHEAMTAALNTLAVLKNM >gi|294972017|gb|ADNU01000022.1| GENE 14 15567 - 16265 544 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395083|ref|ZP_06805292.1| ## NR: gi|295395083|ref|ZP_06805292.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 232 1 232 232 403 100.0 1e-111 MAQFIKVIHTFHYFAEALSWGAIAYSVFLIFGRGWLGILCGALALIATISVWSLFASSRA FFRSPIAVVASRAVLYALAVVGLVVAGLPVEAIILAVLLVVTEGILIVFKAHPALHPHSG GQARLVTDARRDAERGAGRAGAERGSERNGDLAADRRADPRRTPSNRGPRIVPGVQATSG EQRTGQFMSRREARLAREAQAGEAKVGKEQTGGSTAARIVGETPKRPRKNKR >gi|294972017|gb|ADNU01000022.1| GENE 15 16269 - 16679 191 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395084|ref|ZP_06805293.1| ## NR: gi|295395084|ref|ZP_06805293.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 136 17 152 152 269 100.0 6e-71 MTFEYEGESSFAVYGSSRAAAKAVPRECKVEGPIEKAWYRGFGSGTVISVRGQGWHYDGS FSNSTPGTYTITCGGELKDQQLMLGPPMHWAAKVGRVMNIVIAVSGVVLFTGVTALGFIM WIRGREELDQPSRLFG >gi|294972017|gb|ADNU01000022.1| GENE 16 16874 - 17422 528 182 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395085|ref|ZP_06805294.1| ## NR: gi|295395085|ref|ZP_06805294.1| FptB family protein [Brevibacterium mcbrellneri ATCC 49030] FptB family protein [Brevibacterium mcbrellneri ATCC 49030] # 1 182 1 182 182 268 100.0 9e-71 MRLAGKIIFFVGIIGFVLVLGGAILMGVFSFGKIASTTDSLKRFSATTSIDHDGESNLTV YARSSGAAASVSTDCTVEGPGGEAMYKGGSSGYWSSGSDEKWHYAGSFEAKTAGKYTVTC GGALSDEQLMVGPPVGIGSIFGLTGSILIGVFGGFGFAGLTILGLILWLVGRNKQKKQAG FA >gi|294972017|gb|ADNU01000022.1| GENE 17 17482 - 18336 717 284 aa, chain + ## HITS:1 COG:Cgl0607 KEGG:ns NR:ns ## COG: Cgl0607 COG1562 # Protein_GI_number: 19551857 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Corynebacterium glutamicum # 5 271 12 290 304 184 40.0 2e-46 MSFGSGFDTYTRVSYSVASRVIRGYSTSFSLATSALKNPDRDRIRALYAIVRITDEIVDG AAPAPPQDQLTLVNDFQDRLESATRTGFSTDMPVHAFAHTARQCGITRELWAPFFDAMRS DIAGQPPLDLDAYIHGSAEVVGLMCVRIFFRGAPPASLQVEEGARALGNAFQRINFLRDY GHDARVLNRTYVAQELTDQVKREEIARIRQKLAVARPAIDLLPGRARLGVLIAHDLFAEL TDRIEQVPASELMRTRISVPPTKKAALAAKAMSQATPRRERAHE >gi|294972017|gb|ADNU01000022.1| GENE 18 18329 - 19837 721 502 aa, chain + ## HITS:1 COG:Cgl0606 KEGG:ns NR:ns ## COG: Cgl0606 COG1233 # Protein_GI_number: 19551856 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phytoene dehydrogenase and related proteins # Organism: Corynebacterium glutamicum # 5 502 15 521 548 392 44.0 1e-109 MSETVVIGGGVAGLASAILAADRGHQVTLLEMNPQVGGRAGLHEVAGFVFDTGPSWYLMP QVFERFFASVGEDMHLDLVTLDPGYRVCDRGLLDSAPQLTVDVPHGYAGVRALFERLEPG VGPALDAYVESARDTHDLALEHFLYTRFSSLREFVSPQVARHAHRLPRFLASPLDTMVSH TVTHPLLRQILGYPAVFLGTEPRRAPSLFHLMSYLDVVDGVRYPRGGMYEIVRALTRLAR ARGVDIRTSTQVVSLSLEGRTIAEVVARTVPNTTSGGAGLEVFPAENVIAACDLHHLDTA LLPPGRRTRSVRGWGRRDPGIGAVTLLLGVDRKLDALEHHNLFFTRDWDANFDQIFVDGR LPEPASAYVCAPSRTDDTVAPPGCENLFVLIPAPASAHLTGARLGDYASRVIESLGERVG VPHLQSHLLVKKVTGPGDFTTQFNAWRGTALGPANTLFQSAMFRYPVRAPHVDNLVHAGA FAAPGVGLPMCLISAHNAVEAL >gi|294972017|gb|ADNU01000022.1| GENE 19 19798 - 20145 210 115 aa, chain + ## HITS:1 COG:no KEGG:cg0719 NR:ns ## KEGG: cg0719 # Name: crtYe # Def: C50 carotenoid epsilon cyclase # Organism: C.glutamicum_B # Pathway: not_defined # 4 111 9 116 149 107 50.0 1e-22 MSDQRAQRGGGAVSWAYLGFLLFSIAGMAILDARFKLFWFAHPGRAAVVHAAGFFSLLAW DFVGIGAGVFHRGDSPYMTGLNLAPHLPVEELFFLFFLCWLTMNLYGLAKLVARR >gi|294972017|gb|ADNU01000022.1| GENE 20 20142 - 20492 363 116 aa, chain + ## HITS:1 COG:no KEGG:CE0638 NR:ns ## KEGG: CE0638 # Name: crtYf # Def: C50 carotenoid epsilon cyclase # Organism: C.efficiens # Pathway: not_defined # 1 113 1 112 113 67 40.0 1e-10 MTYTLFNLFFLIPAAALLILARARTPGFSRTGFWVCLVGLVILTVIFDNLMIAAGLFFYA NEHTLGIRLGLMPVEDLAYVVFTALALPALWELLGTGGDRASTPNSTTAHHDRKDS >gi|294972017|gb|ADNU01000022.1| GENE 21 20492 - 21373 710 293 aa, chain + ## HITS:1 COG:Cgl0603 KEGG:ns NR:ns ## COG: Cgl0603 COG0382 # Protein_GI_number: 19551853 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Corynebacterium glutamicum # 1 286 5 282 287 261 50.0 1e-69 MRTLLEVSRPISWINTAFPFGAAYVLAGGALGLDLWLGCLFFLIPYNLVMYGVNDVFDYA SDVHNPRKGGVEGALADPARHRFILASATLSALPFVAYFLVRSVIVGLGPGNWWALGVFA LSMFAVVAYSVAGLRFKEVPFLDSLTSSTHFSSPAWFGLALVGSTPTAEVVLILVAFFLW GCASHAFGAVQDVVPDREGGLASIATVLGARATVRLAVVLYVVAGGLVLFTPFPVWLGAL LAVPYIANTGRFWQITDTTSGAANAGWKLFIPLNYAVGFFVTMLMIWSSMVRA >gi|294972017|gb|ADNU01000022.1| GENE 22 21370 - 22353 1041 327 aa, chain + ## HITS:1 COG:BMEI0105 KEGG:ns NR:ns ## COG: BMEI0105 COG0252 # Protein_GI_number: 17986389 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Brucella melitensis # 3 315 12 322 322 161 35.0 2e-39 MRIHIVALGGTIASTASDSGGVAPSATAQAIVETARIDTLPFPVDVTYEQVAQVGSGSIT LDHVSQVVESAKKAREEGATAVVLTQGTDTLEETTFALSLMNDSGIPIVTTGAMRNPTLP GTDGPANVRSAIITAADPRIQMLPAVLVFADEVHDPSLVRKTHTTSVSTFSSGPGAGPLG WVSEDRLVFLHMPATLPGTLTREASAQKAQVALVEVTLDDSLAYVDFLKQAGYSAAVLAG VGGGHVPVNVLERVTALASQMPVVYCARTGAGRTLEATYGYPGAELDLQAAGMIPAGWLD ARKARILTILALESGTKIEDVFSYFRQ >gi|294972017|gb|ADNU01000022.1| GENE 23 22404 - 23591 1296 395 aa, chain + ## HITS:1 COG:RSc0229 KEGG:ns NR:ns ## COG: RSc0229 COG1167 # Protein_GI_number: 17544948 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Ralstonia solanacearum # 4 392 1 393 402 275 39.0 1e-73 MTLMEPIRARLNDCISQMPPSPIRELFKIAHDPAIISFAGGHPDEKLFDVEGLKAAYTHV FDTQGGRAMQYGVTDGEWELRQAAAQRIRGTGISAEASNVLITSGSQQGISLLAHTLFNP GDVLLCENPTFMSALQAFGMHGIEFVAIDTDEGGLVPEALEAAIQYYRPKALYTIPTFQN PTGITMPASRREQIAQVLSESDMWLIEDDPYSELRFTEERMQPISADPRVADRAFYLGSL SKVLSPGVRIGWIHGPDEILERVTVTKQGTVIQSSTIDQLAVAHYLETTNLDKKLEPVRE TYRQRMRTQVDALNQVLPAGSYIAEPSGGMFVWVYLPERYDTSELVYKAIDAGVIFVPGA PFYMENPNHQSMRLTFVSAEPDVIEEGVRRLGTIF >gi|294972017|gb|ADNU01000022.1| GENE 24 23678 - 24628 806 316 aa, chain - ## HITS:1 COG:Cgl0589 KEGG:ns NR:ns ## COG: Cgl0589 COG5006 # Protein_GI_number: 19551839 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Corynebacterium glutamicum # 39 308 7 275 301 205 44.0 9e-53 MKETLLTVQSPDTGMVPVVTSHEPSQSTPAAVHPEVGTGVMLMIGSCLSLQFGAALAVSV FPVMGPLGTTSFRFAFAALVVVALFRPKFWTWDGKQWLSVVCFGAVLSCMNAFFYLAIDR LPMGIAVSLEFLGPLLLAGILSRKLRDFGWIALALGGISLFFFDDFSGDTRLDPLGVGFV LVAAFCWALYILCGSWVAQRVPGTGGIAGALVIGTVCLMPFGVQSAHFIVDDPMLLLFCL GSGLLSLAVPYSLQFMAMCRIPKSVFGVLLSLEPVFAALVGWLILGQSLSVVAVLAIVLV VTASAGSTLGARAKAS >gi|294972017|gb|ADNU01000022.1| GENE 25 24788 - 25717 760 309 aa, chain + ## HITS:1 COG:Cgl0590 KEGG:ns NR:ns ## COG: Cgl0590 COG0583 # Protein_GI_number: 19551840 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 297 1 294 303 209 42.0 5e-54 MINLHRLRILMELQRQGTLAEVAAELGYTPSAISQQLNALEREVGTRLLERVGRNVRLTD AAVTLTRHGAAIFAAVDEAESDLASLQGPVQGSVRVASFSSVLLSLAPQALTHLSSSFPD LEVQLIQREVDEAQEGLLSHAFDLVLGEEFPGEPMPSPAGLQREDLYSDPLRLVAPTSID GLPEPEHLSEFHEVPWSAEPKDSRMGRWVSRLHGRANIAPRIICETLDPLLLVQMARTGQ SVSIIPGVLGAEYLSGVALFDLPGNPTRNLYTEVRAGRDRHPALVAVREAFAHAADQFRT HPSTGALAW >gi|294972017|gb|ADNU01000022.1| GENE 26 25711 - 26385 250 224 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395095|ref|ZP_06805304.1| ## NR: gi|295395095|ref|ZP_06805304.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 224 1 224 224 424 100.0 1e-117 MVRLLIDTNVLVSDALWCSLLTVREIAGSREGAAIELCTTTEALDELRYVVKRVLGRRPP PVLAGVVRHRRATATVLDTAELPSALKAERRSFVRDPDDAFLDTACRGFGLDMLVTNDVQ AFGQMTDEERGYRISNAESCLLELWSQLVARTGPPTEVVGARSPGLPTAGDFVTIWERIY REYCEEISLEPEGRPIFDQLRRARAGRFASSLKAQSQNLSIRQR >gi|294972017|gb|ADNU01000022.1| GENE 27 26366 - 26695 418 109 aa, chain - ## HITS:1 COG:ML1755 KEGG:ns NR:ns ## COG: ML1755 COG1760 # Protein_GI_number: 15827940 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Mycobacterium leprae # 51 109 398 458 458 89 78.0 2e-18 MVAESDENEPIGGELHTPDVIHETHDHLAGTTVLGEDLSELTEVGETQTTNAIAAGKAIN AAKMAMWGDGTHRVSLDEVIETMWSTGEDMSHKYKETAMGGLAVNVVEC >gi|294972017|gb|ADNU01000022.1| GENE 28 26777 - 26956 114 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGSGLDFKFRIEQVRESVYSTHYLEECRVNALFVRFVHVFGPKSTRYSTLQVQNSSEV >gi|294972017|gb|ADNU01000022.1| GENE 29 26866 - 27135 138 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKTNDSGNNFSTMITNGRANLFMLLLERESRHFAFAFCEFHVAVSAVSRVCQIVRRNIL CLGLAWILSFALSRCVKAFTLHTTSRSVE >gi|294972017|gb|ADNU01000022.1| GENE 30 27065 - 28468 1657 467 aa, chain + ## HITS:1 COG:BH0358 KEGG:ns NR:ns ## COG: BH0358 COG2031 # Protein_GI_number: 15612921 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Bacillus halodurans # 11 462 11 440 441 288 40.0 1e-77 MNKLARPFVIMVEKLFPESFVFAIGLSIVVFFACWGLTDSGPMQIIDAWGTGLADLLSFM AQISLTVLCAHALAHTRPVRRFLSALGRLPRKEWQAYSLVVLTAGIGSLFAWAFGLVAGA LVARQVAIEMREKGIRVHYPLLVASAYAGFVVWHMGYSGSAPLFVATEGNKMQEAIGGLI PVSETIFAPWNVITAAVTLAAIVVLLPLMHPKDKREELIEINDEAIADYQNEQEKLESEL RANATGSDETQTTSAGPTIAQRLDGTRILVLIPGLALLVYLISYFVQNGLALNLDIVNWS FLCLGLLMSRSILEYIKLVANASGSVGQLIVQYPFYAGIMGMMVGTGFITVISDWFTAIS TPLTLGFWAFLSAGVLNMFVPSGGGQWAIQGPIFIEAAKNLGVNPSTVVMGVAYGDQWTN MAQPFFAVPLLAVAGIHVRKIMGYTIMVLILTFFTFGGGILIAGAVA >gi|294972017|gb|ADNU01000022.1| GENE 31 28472 - 29134 367 220 aa, chain - ## HITS:1 COG:ML1351 KEGG:ns NR:ns ## COG: ML1351 COG2094 # Protein_GI_number: 15827702 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Mycobacterium leprae # 26 216 15 208 214 152 50.0 4e-37 MDGSGGTAGSGPDGRGAGSGLVGGCDWLSPEARTSARVLLGCFLATPDVTVRITEVEAYA GTDDPASHAYKGPTARNAVMFGPAGHLYTYTMHGHTCCNVVCSPAGVAQAVLIRAGEVVD GAEVAYSRRRPGVSAAHLARGPGNLTRALGVTMHHSGVDLCDRGSEVRLLRGELRAGESV AVGPRVGVSKAADDPMRFWIQGDPTVSAYRRSPRAPKVMT >gi|294972017|gb|ADNU01000022.1| GENE 32 29134 - 30723 1641 529 aa, chain - ## HITS:1 COG:MT0075 KEGG:ns NR:ns ## COG: MT0075 COG1760 # Protein_GI_number: 15839448 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Mycobacterium tuberculosis CDC1551 # 1 529 1 461 461 429 50.0 1e-120 MPVSVFELFSIGVGPSSSHTVGPMRAAASFVELVGDRVSELDSLRVDVFGSLAATGRGHG TFDAILLGLEGCKPEEIEANDMDQRKARMAQTGAIRFGDVRDIKLTEEDMVKRPLTVLER HTNAMTLTAYNAAGEELAKETYYSVGGGFVVAESVENEPIGGELHTPDVIHETHDHLAGT TVLGEDLSELTEVGEAQEAEAAAGGAAATGVAGTSASEPTTAETGGAGSEGTTSGPVYEY SSAADLLRIAKENDLALWEIVMANELQERTEEEIREGLLHIYSVMDECAMSSLDRTGYLP GGLKVKRRAHDWFLRLKAEDPHNDPKFYQEWVNLIALAVNEENASGGRVVTAPTNGAAGI IPAVMYYALHFVDRVVDAGPQGRADAIVEFLLTAAAIGGLYKEKASISGAEVGCQGEVGS ASSMAAGALAQVMGGTPEQVENAAEIAMEHNLGLTCDPIAGLVQVPCIERNAIAAGKAIN AAKMAMWGDGTHRVSLDEVIETMRSTGEDMSHKYKETAMGGLAVNVVEC >gi|294972017|gb|ADNU01000022.1| GENE 33 30875 - 31264 574 129 aa, chain - ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 1 122 1 118 132 109 50.0 1e-24 MVNLPKELSYSADHEWVNAAPDAIAGATVRVGITEVASDALGEVVFVDAPQVGDTITAGE ACGEIESTKSVSDLISPVSGEVVAVNEALEDNPTLVNDDTYGEGWIFEVAATEAGELMDA DAYAEQNKI >gi|294972017|gb|ADNU01000022.1| GENE 34 31263 - 31382 59 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCVPFVVPVPGKGGVTSSVPHVWVVQWKKLELLPQDSRR >gi|294972017|gb|ADNU01000022.1| GENE 35 31364 - 32500 1564 378 aa, chain - ## HITS:1 COG:BH2816 KEGG:ns NR:ns ## COG: BH2816 COG0404 # Protein_GI_number: 15615379 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Bacillus halodurans # 3 376 5 363 365 285 41.0 7e-77 MTKHTPLYDIHEQLGASFTDFGGWEMPLKYQNELDEHRAVRGAAGLFDLSHMGEVRVKGA QAGDYLDYAMLSKYSTMKVGKAKYGLLIDENGHLIDDLITYRLADDEYLIVPNASNTPAD VEAFTKRVEAFLAANPGADVTVTDESADTALIAVQGPASEDILLSTQDTEEGRNAIKELA YYAWAPLKVGGLDILLARTGYTGEDGFELYLPNAGAQELWNVLTKAGADFDLKPAGLAAR DSLRLEAGMPLFGNELTNDITPVEAGMGGMVAGALKNKTEFVGREALEKLDTSKVDRTLV GLSSSGRRAARSGAELKAGEQTVGVITSGQPSPTLGHPIALAYVDVDQAEAGTELEADIR GKRYPFTVVETPFYRRES >gi|294972017|gb|ADNU01000022.1| GENE 36 32528 - 35500 2964 990 aa, chain - ## HITS:1 COG:Rv1832_2 KEGG:ns NR:ns ## COG: Rv1832_2 COG1003 # Protein_GI_number: 15608969 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Mycobacterium tuberculosis H37Rv # 486 977 1 488 489 583 59.0 1e-166 MTTGSHQPATSMAVTSAVTGDAPRPFSDRHIGARAHETQQMLDAIGVDTLEDLVRQALPQ NVQFEGELDLEQGLDEHIVLDQLREIAGKNQTRVQMIGQGYYDTITPAVIRRNVVENPAW YTAYTPYQAEISQGRLEALMNFQQVVIDMTGLPIANASLLDEATATAEAVLLMRRANKKG STVVLDSELHPQVISVVRTRAHAMDFQVQVADLSQGLVGDDVFGIVCAQAGTSGEIRNLD DAVRGAKERNALVVFATDLLALTLMKSPGEQGADIAVGSSQRLGVPLFFGGPHAGFISVT SKLRRQLPGRLVGVSTDPEGKAAYRLALQTREQHIRREKATSNITTAQALLADMAGFYAV YHGPAGLTRIASRIHRLAHAFAQCAASISGAEVVTETFFDTVTLKVADAAAAVAAADEAG INIRHIDDAHVGVSFGESHDVAVANTLLEALGASETIDADEFEKAGEGTFGPGHVAAPQL PENLVRTSEFLTHPTFNSYGSESDMMRYMRELADRDLALDRTMIPLGSCTMKLNAAVEME AITWPEFASIHPFAPAQQTQGWNQLLTELEEMLAEITGYDKVSLQPNAGSQGELAGLLAF KAYHEANGQSQRDKILIPASAHGTNASSGALAGFDVVTIASADDGSIDVDDLGAKIAEHG DRVAGIMITYPSTHGVFEADVRKVCDMVHEAGGQVYIDGANLNATIGWAKLGQIGGDASH LNLHKTFAIPHGGGGPGVGPIAVGAHLAEYLPGNPLDEQYVDGSNADGLPVSGAFQGSAG VTPISWAYIKLMGQQGLRVATEHSLLTANYVSRELQDYFPTLYTGTTGYVAHECILDLKD ITAQYGVTAEDLCKRLMDFGFHAPTLAFPVAGTVMFEPTESESKTELDRFIVAMKKIHQE ITAIGTDYSYEESPLAHAPHTATVVLGEEWDRKYSREQAVYPVSSLKRNKYFPPVGRINN ALGDRKLVPFCPPLEAFDVDANFDLVAISI >gi|294972017|gb|ADNU01000022.1| GENE 37 35831 - 37489 1555 552 aa, chain - ## HITS:1 COG:DR2540 KEGG:ns NR:ns ## COG: DR2540 COG1574 # Protein_GI_number: 15807524 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Deinococcus radiodurans # 8 512 7 485 496 243 35.0 6e-64 MPQLFVNANIHTFDPANPHATAILTDGETITAVGDAEELRANTSGVETVDLGAATVIPGF VDAHLHALAHAESLAELNISKTTSLPEAVEAIRAFAAILPEGQWVTGGRWDYSKWGLRHQ PDRSLLDVALPDRPVALWSIDFHTLWCNGAALRAAGIDRNTPDPRGGKIVRDAHGEPTGI LREDAATLVERVIPHLPEETLGELMRHAQKQWLQEGLTGLHDIDGEFSKRAWNQLRASGD LNMRVVKYLRLDEYDWAKDTRWTTGSGDDWYRHGGLKLFSDGALGSRSSYMSSPYPAEGE LYETGSEAEQNFGMQITTEQVLVEQMRDAYAHGIVPIVHAIGDQANHHVLNAFEQTQADR QAAEARLGYPLRARIEHAQFVQPQDVARFAQLDVIASMQPRHCISDLHLLNALRPDPNLA AYAWTALLDAGAHVAFGSDGPVEPTTPFAAIYAAMTRADIAGDPTTTFQAQNRMDAYQAI RCHAAGPAFASGMETRAGALKAGMNADFIAINHDPLSVTEFGDDDALFEHATAIRDTVVN TTVVGGRIKFRR >gi|294972017|gb|ADNU01000022.1| GENE 38 37822 - 38802 1185 326 aa, chain + ## HITS:1 COG:Cgl0787 KEGG:ns NR:ns ## COG: Cgl0787 COG4607 # Protein_GI_number: 19552037 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Corynebacterium glutamicum # 38 325 45 335 338 270 48.0 2e-72 MKLRRLTAALATAMALTLTMSACSSGTSGDENKSGDTISIEDNSGTVEVPKDPQRVVTLD NRSFETLESWGIKPVAAAKKLMPADNPQKKDDSIQDVGNHREPDFEVIVAAKPDLVITGQ RFRDHGEEIKKYSGDAPIVNLEPREGEDLGEELKRQTTTLGEIFGKQDEAKKLNDDFDAS VKRVKDAYNKDEKVMSVITSGGNINFAAPHEGRTLGPVYDMLGLTPSLEVKDSSSDHQGD DISVEAIAKSNPDWILVMDRDASVSANNGEKYTPANELIAQSEALKNVNAVKNQRIVYMP QDTYLNEGLQTYTEFFNSLADALEKK >gi|294972017|gb|ADNU01000022.1| GENE 39 38828 - 39937 1153 369 aa, chain + ## HITS:1 COG:Cgl0788 KEGG:ns NR:ns ## COG: Cgl0788 COG4606 # Protein_GI_number: 19552038 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Corynebacterium glutamicum # 55 366 19 330 333 382 69.0 1e-106 MKSHNSSATPAERSTTPPAGSRVSEDARGGAARGGAGTRADEGSRAAEGTRAPAGRLFTW PLIIGVIVTAGLVTVSLFVGEYDIFSGEDGAAIFQITRIPRTIALVLAGAAMAMCGLVMQ MLTQNRFVEPTTTGTTEWAGLGLLLTMVVAPDASVLTRMVVAVVFAFVGTLIFFAFLSRI QLRSSVIVPIVGLMLGAVVGALSNFIALQTNLLQSLGIWFAGSFTSVLRGQYEPLWIVVV VVIAIFIAADRFTVAGLGKDIATNVGLNYNRIILLGTGLVALASGLVTVVVGNLPFLGLV VPNVVSMFRGDDLRSNLPWVCLAGISLVTICDLVGRTIIAPFEVPVSLILGVIGSIVFVA LLLQRRRGQ >gi|294972017|gb|ADNU01000022.1| GENE 40 39934 - 40968 867 344 aa, chain + ## HITS:1 COG:Cgl0789 KEGG:ns NR:ns ## COG: Cgl0789 COG4605 # Protein_GI_number: 19552039 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Corynebacterium glutamicum # 7 344 34 371 371 297 54.0 2e-80 MSATTQAATTSARSTHPLPTPRARRRYALIVGVLIALATGIAFGTLSWDNPMPFGSEGFR LIAQLRVQNLLVIALVALCHSTATVAFQTVTGNRILTPSIMGFESLYTLIQTGAVFLFGI AGGSILRGTPQFVLQAAVMVAFAVLLYSWLLSGRRGDLQTTLLIGLVIGGGLGAGSTFMQ RLLTPSEFDVLTARLVGSIASAHVEYLTVALPVCVVAVALLVLMSGRLNLLALGRDTAVN LGLNYKTNLIMVLGLVSVLMAMTTALVGPLTFFGFLVAMISYQLADTYDHYRVFPISWLT GFVILGGAHFILKNIFYAQGSVGIIIELVGGTFFLAYILKRGRL >gi|294972017|gb|ADNU01000022.1| GENE 41 40965 - 41975 208 336 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 87 308 2 226 245 84 26 1e-15 MTLSKQANRGGVATDAEVVAGKAGPGAGARETGHESEAVTPPQGRTILSLQPREHRESSG SLAKPGACAGDGCDTCEFGGPDPSLAIRIENVTRRYSDSVAIGPVSQVIPGCGVTALVGP NGAGKSTLLTMMGRLMGMDTGTISMGGFDVTSTPSKELAKVVSILRQENHFVTRLTVRQL VGFGRFPHSKGRLTEHDEKIISDAIDFLSLTELEGRYLDELSGGQRQRAYVAMVLAQDTD YVLLDEPLNNLDMQHSVTMMKHLRQAAHELGRTVVIVLHDINFAATYADHICAMKDGQVV EFGTPEQIMRDDILTGVFNTPIQVLDGPRGKIAVYH >gi|294972017|gb|ADNU01000022.1| GENE 42 41994 - 42896 991 300 aa, chain - ## HITS:1 COG:Cgl1863 KEGG:ns NR:ns ## COG: Cgl1863 COG0483 # Protein_GI_number: 19553113 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 10 277 6 242 280 115 32.0 8e-26 MHATPNPNPYAPLLMIARNAAVMAWERMAHWSAQLSDATVEAKDNPNNLVTVADAQIESI VTGYLNYVRPDDTVVGEEEVQPTPFDPSARPGLLDIPDHAHIPACEWHIDPIDGTVNFVR GIEHYCFSAGVRLASPDHPAQGTWLAGLVAAPVMNTTWFATSGAGAWMTAGLPDMERILT PAEVGAARLSGTPAGRRGSVVATGFGYGKERRDRQFRALIDIMERFDDVRRMGSAAIDLC QVAQGRVNAYYERGLGVYDWAGGAVIAREAGCHVHIPTERDMPVVAADTADLLEFLTSTA >gi|294972017|gb|ADNU01000022.1| GENE 43 42905 - 43306 352 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395109|ref|ZP_06805318.1| ## NR: gi|295395109|ref|ZP_06805318.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 27 133 1 107 107 120 100.0 3e-26 MPRRSQPLSTEQNALVSSVRRIAKQRMRINASYIDAVVKAREAGVTFSAIAEAAGMSSQA AQEIFRRHGSAATTSPAKTSDAKVTPLQPKSNDTDTTQDATASATAGSSGVHSGVPQGAA AVTQEVGTQDPTE >gi|294972017|gb|ADNU01000022.1| GENE 44 43538 - 43927 498 129 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_03420 NR:ns ## KEGG: Asphe3_03420 # Name: not_defined # Def: universal stress protein UspA-like protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 129 1 129 137 94 41.0 1e-18 MTVLIGYLPAPEGKAALEVGFREAHVRGTDAIVITSPRKGAPDVITKLNEQAREDILAVA EKHNVQARIEQPTHEDDLVGTFNEFAAEHGCDLIVIGLRKRSAIGKFILGSQAQRILLEA DVPVLTAKA >gi|294972017|gb|ADNU01000022.1| GENE 45 44203 - 45432 953 409 aa, chain - ## HITS:1 COG:SMb20101 KEGG:ns NR:ns ## COG: SMb20101 COG0579 # Protein_GI_number: 16263849 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Sinorhizobium meliloti # 8 405 17 404 426 248 38.0 1e-65 MELKRIAVVGGGIIGTAVARELTRKQPQAHITLIEKESLLAQHQSGHNSGVVHAGLDCEP GSSNAKLHRRGVELLTAYTTQNGLPFNECGKLVVAQDVDELERLETLLERAQAADVPGVR MLDRTQMREVEPGVRGIAALHSPHTAITDYSKITDAFARDVEAAGGRIMYDSEVKRVDAM GNEVRVRLALPGAQDSTMTADGGTYDLVITCAGLQADRLADNSGQDPHPKVVPFTRDYFE INGESAQAVRGLITAVPGTPNPVHLSTTTRGALLVGPYASLSLGREDYSRGLSGFKLDDV ASTLGFGGFWKYASKNIQSAAREARTAVSPSSYLESARKYVPDLNVSAARPGPRGVHAQA MNSDGSLVDDLVLSARGRLTQVRSVPAAGATCSMAIAEHVVDQALAQVS >gi|294972017|gb|ADNU01000022.1| GENE 46 45500 - 46723 727 407 aa, chain + ## HITS:1 COG:HP0593 KEGG:ns NR:ns ## COG: HP0593 COG2189 # Protein_GI_number: 15645218 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Helicobacter pylori 26695 # 1 394 33 474 598 187 29.0 3e-47 MSTYELDWTGRADAEAAAHTPPRAQVGYVGVLGGTSAEAATTPTLPSTGSMVIEGDNLDA LKHLQQTHKHRVSVVYIDPPYNTGNALPYRDTFGAAGHAGWMSMMLPRLIVARELMRLDG VIFVSIDDREHAFLTLVGHQVFGEENFLGSFVHQRARGGGQARTWIRGHDYIAVWAKDAS LVDGFWQEKRPPAKYETIDGKRYLVEDDVLRTTFGRYERGTERRLMYEDIEAVRGSAKKA QVDAWLAAGTHILRPWGGGKHAVARLTPAEKVASKMYSIVRALGHEGRNDLEALGLGGLF TYPKPVSLMRTLVRSRTFFDPEAVVLDFFAGSGTTAQAVMELNAEDGGRREFILVQKPEV LRPSTGKLDSQVTPDSITISELARRRVVAAAKAVGCDPATITDVRLD >gi|294972017|gb|ADNU01000022.1| GENE 47 46841 - 48316 1608 491 aa, chain + ## HITS:1 COG:BH0994 KEGG:ns NR:ns ## COG: BH0994 COG0531 # Protein_GI_number: 15613557 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus halodurans # 83 472 1 380 395 330 46.0 3e-90 MSEPHQHPSSYTHESHDSIFNKAMGRLDALFVGFGAMIGFGWIVLAGGWIEQAGTVGALL AFVGGGVIMAFVGVVYSELVAAMPLAGGEHNYLMRSMGPKIAMIGSWCIVGGYITVVMFE AVAVPKTALYLFPDLNKVYLWTVAGFDVYLTWALVGVITAVVLTYINIRGVKVASLVQTF VVSFLLIVGMLLVFGSFTGGEMEYVEPLYSGGFSGFVTVLVAVPFLFVGFDVLPQAAEEI NVKPRQIGKLVVFAVLMAVAWYVVIIFTTSVSMPHDEIAALNAEDGLVTADALTAMLGHP IWGKIVIAGGLAGIITSWNAFLMGASRLMWAMANSGMIPEWFGKIHPRYRTPVNALLFIG ALSVVTPFLGSKMLGWVVDAGSPMIVITYFLVSVAFVLLRKREPDMERPMRVGGKGNVGI VVGAIAAVLCLFLFVLYLPVTPWSAELAWPSWTMFGLWLIAGVVMMFRLPGGVTPGPNAE HDLLTKLGKNH >gi|294972017|gb|ADNU01000022.1| GENE 48 48368 - 49834 1095 488 aa, chain - ## HITS:1 COG:mlr0229 KEGG:ns NR:ns ## COG: mlr0229 COG0154 # Protein_GI_number: 13470503 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Mesorhizobium loti # 3 478 5 459 475 249 35.0 1e-65 MSDLHYMGVKEVLQAYQQGLSPVELITHLLERIKHVNPRINCVVDTLPDLALEEARRAEA VLRGQQSGTSGAGEAGVGDTSAVFAHKPLLGVPFLLKEQHDLAGHSATRGSQTLAGAVAE VDHPIVARLRAAGAIPLGRTTTPEFSCATFSHTREWGVSRNPFNLDKTPGGSSGGSGGAV AAGFAPFATASDIAGSTRIPAAFNGLPGFKSPFGSTPGTHPSNNDWYRGDHVLARSVADT AYVFNAITGVDPYDNATVPVEDYPHEFGEVGQLLAGKRVAVSADLGAYALDPAVAAGVDR VAQALAGAGAVVETVDVGLDLATITRASMSHFGHIFGAKLFQSVNGDLSGFEPYTRLMVE STTQAARETSLVDSLELESQIQDTLTRGMEGYDVLVTGTSAIEDLDADCDYLGEVEREAG NLDFYWEGHMTVPFNIANRRPVMAMPSGVGSAGVPTSVQIVGHPYDCAPVFEVSAALEQL VTVPRPEL >gi|294972017|gb|ADNU01000022.1| GENE 49 49922 - 50641 724 239 aa, chain + ## HITS:1 COG:no KEGG:Gobs_3694 NR:ns ## KEGG: Gobs_3694 # Name: not_defined # Def: hypothetical protein # Organism: G.obscurus # Pathway: not_defined # 14 174 10 169 172 64 29.0 3e-09 MKDSARRRARHITIFLDVDGVLNSFPVKGKRFKKEGRKEVQAWNYILHFRPKIIKALEKI VKTRDADIVWLSTWSALCRTEIEPKLKFERSYPIIEMPDATYNRHAGDHTKWWKSLAMKQ WLADNPGKRAVWVDDDLAHENTREYFEKTYRNRMLLIAPEFKYGLTEEQVTSIEDFSYPR PSGSEPMNTSDFVVARAHDADSDSDAERECDTAQPTFSPEPTPHAGPDPDTPTAQSSNE >gi|294972017|gb|ADNU01000022.1| GENE 50 50634 - 51566 734 310 aa, chain + ## HITS:1 COG:RSc1956 KEGG:ns NR:ns ## COG: RSc1956 COG0796 # Protein_GI_number: 17546675 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Ralstonia solanacearum # 21 276 3 261 277 100 34.0 3e-21 MSNAAAGQPHANSAPAGAAPTSSTPTVGLLDSGLGLVPFAVAVHHELPHANLALAMDPDF APYGALTSAQIEQRALASARTLVDAGARALVIACNTASVHALSAVRERFEPLVPVIGTVP AVKPAAATGAPFAVWATTATTGSAYQRSLISMYAGDINVYPVACAGLAQAIDSADPETID IALSAAVTATPREAQSIVLGCTHYGLVADRIEAAFDRPVTLFDSPQAVARQLARRLAAQV VSEDPAEVVPAPLSPQAPQPPQVSASPQDSASPTGRLTHVFLSGKPGSLPAAVEAYAVGR ELLALRDKPE >gi|294972017|gb|ADNU01000022.1| GENE 51 51613 - 52269 744 218 aa, chain + ## HITS:1 COG:no KEGG:Namu_4892 NR:ns ## KEGG: Namu_4892 # Name: not_defined # Def: hypothetical protein # Organism: N.multipartita # Pathway: not_defined # 14 164 20 171 194 70 35.0 4e-11 MLSLIYRQARNFFLAQGIFAVLAGLAILVWPGQSFVIVAYIFAGWLIADGVFSCFLWLRA RRVPGAQLSMGKGLIQIILGVIIAMLPGVFASIILVIVSLAVFLIGMGLLTTGLVIKPTG NRTWVAFVVCGVLAFAGSVMIVVFPRESTLALLTVVATVLIFVGATCLALGFKFGKSAQA LADRERAYSNPSNDGRGDVIEGTVEDTGNDDTPPGISR >gi|294972017|gb|ADNU01000022.1| GENE 52 52499 - 54838 2235 779 aa, chain - ## HITS:1 COG:MT1165 KEGG:ns NR:ns ## COG: MT1165 COG0620 # Protein_GI_number: 15840571 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Mycobacterium tuberculosis CDC1551 # 6 775 7 758 759 697 53.0 0 MTTSSQTPFPHATVTGLPRIGPRRELKRALEALWAGTIDESEYAEAAHSLRLSSYDRQRD LGLVADYAIPGDFSAYDQVLDAALAAGLVGEDTTGTDLGEYFALARGTVDRAPLEMTKWF DTNYHYLVPEVVDDRPFTARPQRILELVDEARQAGHTIRPVLLGPVTLLALSKPAEGAGR QPLDRLDELVDTYAELLTALHAAGVEWVQLDEPTLVTDLDAVSDEELAQRAGQAHARLLA TADRPQVLITAPYGSLRAGLDALLGAGPEALGVDLSAATRTIDPEWLGRLKAADFGGTRL VAGVIDGRNIWAADLEAELAVLTSLQSGGREVSVSTSTSLLHVPYTVSAEKRLPVDVAGW LSFAEEKVTEVEALAAALDAHGEGAADPVSVREAAFSRSARAVRTRAESDRVVDEQVRAR VAAIGERRTRVGSVEERREAQESLGLPLLPTTTIGSFPQTPEVRQARAALRGGRISEDEY TETMRAEIAQVVKLQEELGFDVIVHGEPERNDMVQYFAENLAGFAVTDHGWVQSYGSRCT RPPILFGDVHRPEPITVPWSTYAASLTDKPVKGMLTGPVTILSWSFVRDDVPLSTVAEQI GLALSDEVAELESAGVRIIQIDEPALRELLPLRADNRADYIAWAVDAFRLSSISVDPGTQ IHTHLCYSEFGQVIAAIDALDADVTSIEAARSRMELLASLDPEEFDRSVGPGVYDIHSPR VPTVEELTGLLEAAITHVPRESLWVNPDCGLKTRKYEEVRPALANLVEARNEVRAKLTV >gi|294972017|gb|ADNU01000022.1| GENE 53 54835 - 55893 622 352 aa, chain - ## HITS:1 COG:aq_1429 KEGG:ns NR:ns ## COG: aq_1429 COG0685 # Protein_GI_number: 15606607 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Aquifex aeolicus # 56 345 12 296 296 160 32.0 5e-39 MTTLSASAPLDTHTSGPVTDTSGRREDGTLAETWETGTLAAGTSEREPGHQPESRLALSF EVMPPRSAQQQEQSGELLDLLASYDPDYVAVTSAVRTGWSAGTAAFISQLSATTRLRPLA HLACTAAPRDELVTWIERYIDSGVRGFLAIRGDLAPGATAPPAGHLAHADALVTLLRSVE RNQVARLCAGRFAIGVAAYPSGHPESKRPEEDIDVLAAKQRNGADFAITQLFFNPAQITT MSRRADLAGVTLPIIPGIMPITGSARLKRMCQLSGLTPPAYIAQALAAAGSPAEEYEIGL SLTADFVEALVAVGVPGLHFYTFNDPTTITELLSRLSPQTRARLTTTRKDTP >gi|294972017|gb|ADNU01000022.1| GENE 54 55901 - 56953 1061 350 aa, chain - ## HITS:1 COG:mlr6892 KEGG:ns NR:ns ## COG: mlr6892 COG3491 # Protein_GI_number: 13475741 # Func_class: R General function prediction only # Function: Isopenicillin N synthase and related dioxygenases # Organism: Mesorhizobium loti # 6 342 32 360 366 317 51.0 2e-86 MSLSSLPILDLSQADDPQHADDFRRQLRGVTHTVGFFYLTGHGIPASDFSELLETAQRFF ALPEEDKLSIENTNSPHFRGYTRVGGERTLGNVDWREQIDIGPHREPVTEPLHTYDRLTG PNLYPEALPELKTVTDSWHEKLTAVGERLLSEWALSLGQPADVFGPAFAHDPESFIKIIR YPAPTVTPAEDNSGEEDAITQGVGAHRDGGVLTLLYPQPGTTGLQVNYQDEWIDVEPIEN TFVVNIGKLLEVATGGYLRATVHRVLPTPPGQDRISVPFFYNPSLRASLPELTLPQELAA QARGVSADERDALFAVYGENALQSRLRSHPNVAAIHHADLLETTAGTQAS >gi|294972017|gb|ADNU01000022.1| GENE 55 57111 - 58289 1059 392 aa, chain - ## HITS:1 COG:SP0197 KEGG:ns NR:ns ## COG: SP0197 COG0285 # Protein_GI_number: 15900133 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Streptococcus pneumoniae TIGR4 # 15 201 6 194 416 70 27.0 8e-12 MVATHDPHDEPFFREWNTHRHVTRSRTRTTQLQHALGLTRTLPTPAILIVGSKGKGTATA AATSALAKNATVGTITSPPLRHNRERIRINGRAISHTEYARLSEIAHDAIRTLPPVTDGY LPPSGIYTQTGIAYLLQQGVDFLVIEEGLGGLSDDVSLFDYPTVGITQIFMEHSDILGNS LSSITHDLLGTITPATTSIVSHYNQPQEVWDYLAGRDIELPELELPEPELVQASTMTATN LEIGARAAATLRGRYVPIGEQELILPARASTHTPPHSDALWMVDAGINPEGIQHALTRAT EELGHFHVLAGLPDVKDVDACLEVLEPFPVTFVGAGRDYLDYTHLAAHGPVLKVEDACEQ ALASGKNILAVGTMSVAGAVLELLDAPTHFWW >gi|294972017|gb|ADNU01000022.1| GENE 56 58481 - 60250 1703 589 aa, chain - ## HITS:1 COG:no KEGG:AARI_32240 NR:ns ## KEGG: AARI_32240 # Name: not_defined # Def: putative RNA polymerase sigma factor # Organism: A.arilaitensis # Pathway: not_defined # 451 544 535 628 830 117 64.0 1e-24 MTVPATRAIAAINENIEITITSFKKINDRNEPQDGQLYQYDLAQLDFKWDASNADPKPGD QFSIEFPPELKMKDSGTFPLQASDGKKYGECLVEDTKITCTFNDNIAGKTDIKGSGNAVV SAEKASESNQLDFTINGKKTAVTAPDDKPIGSRDGYEEWQTDKWAPKLNANSTELNWQIA FNADVITRESGQNLDNVDLTFIDKAGPGQVFVETDSKWFIKAAQSADNPDLHEPITDASG EQFTQDYGDLKLTVTLNDAKTEATINIKGSMKSGINYSLIYHTQPSNGKISKGFVYKNSV SGTGIQGTLTKKTSYIEAFTIGIELKDGFGNFDIAKRIEGPGSGHLAEGTKFDVAVAWSL PDGKKPEDYDWEIPDNPMILPITVGETTVSTVQFPVGTKITLIEDPNTANPKNESVTFGT PTFTVGESTGETAEFVIENKSTKKVNLTNQVDTVPEPTPEPSEEPTPEPSEEPTPEPSEE PTPEPSEEPTPEPSEEPTPEPSEEPTPEPSEEPTPEPSEEPTPEPSEEPTPEPSEEPTQE TPIEDSGNDNSPLPRTGSNVGLGLLAAVTLICGGVVMLVASRKRGKMNR >gi|294972017|gb|ADNU01000022.1| GENE 57 60195 - 60362 62 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISMFSLIAAIARVAGTVIASSKLNTASVASAVRLIVLGNNVSPNPPLHAHAQRP >gi|294972017|gb|ADNU01000022.1| GENE 58 60647 - 61414 531 255 aa, chain - ## HITS:1 COG:TM0065 KEGG:ns NR:ns ## COG: TM0065 COG1414 # Protein_GI_number: 15642840 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Thermotoga maritima # 7 248 4 245 246 96 26.0 5e-20 MSQVPALRRAVAILRHLAASNRPISAGAIARSGNVPRSSAYEILNVLEELGLVTKVDAGY LLGPGVAELGSAYLRINPLQRVAQKDVRALAERARGVAQLAVIRGWETVYVLKEQSVHSM AVITAAGVHMPAYLTATGRAIMATMEKRDVLAALSREVAFVNRTGKGPRSVHDLMGELTR VRTQGYAIETGEVTPGVWTVAAPVYDAAGRAVAAVGLTLPDSDYSQNRVSEAATMCTRAA ANVTQLIGGGLKALN >gi|294972017|gb|ADNU01000022.1| GENE 59 61414 - 62787 1101 457 aa, chain - ## HITS:1 COG:YPO1974 KEGG:ns NR:ns ## COG: YPO1974 COG0402 # Protein_GI_number: 16122218 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Yersinia pestis # 18 452 18 450 456 203 32.0 7e-52 MKTLWFENLYVGGQVLNNVAVLVADDGSVEEMRAGVNAPPEAVTYSGLALPGANNAHSHA FHRLLRGRTHADGGTFWTWRKVMYRAAEQLTPENYYLLARAVYAEMLTAGYTSVAEFHYV HHQVGGKPYGSHDMELALARAARDVGIRLVLLDTCYLTGGIGQELNEQQARFSDGSIDGY LERHAGLATALADDLGGAFGGYSTVGYSGSEDPLVTLGSAIHSVRGVAKPDLPAFAGLDG PLHVHLSEQPAENEACLEHYGVTPTRLLADAGVVTDRLSAVHATHLTDEDIRLLGDARSA VVMCPTTEADLADGIGPASALAGAGAVISLGSDQHVVLDPLLELRALEAGERLGSGERGR FSPDELIAALTSGGAYSMHIRPGVGVGEAQVADFVVVDTESVRTAGSVGEQVVLAATATD ATHVIVGGREVAAHGEHAQLGDVAQLYGAALREFELD >gi|294972017|gb|ADNU01000022.1| GENE 60 62784 - 64004 1045 406 aa, chain - ## HITS:1 COG:lin0541 KEGG:ns NR:ns ## COG: lin0541 COG0624 # Protein_GI_number: 16799616 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 20 403 23 409 414 187 32.0 4e-47 MSDVVSLLNDIRDVGRDPRGPGYMRPGFSSTELNLREWFVGEAQARGLDIEIDHNGITWA WVTAPGDNAVVTGSHLDSVPGGGEFDGPLGVASALAAVDQLKADGRLEQLNRPLALAVFP EEEGSRFGVACLGSRLITGVIEPDRALGLKDAEGRTFAEVASEVGLNPDLMGQDKERLSR IGSFLELHVEQGVGLIDIGQPVAIGSSIVGHGRWRFTFAGQGNHAGTTPMTKRADPVVAG SQVIGAIPAVVAGVDGKAVATVGRTILHPGGTNVIASSMDFWLDIRHPDDGVVGAVLRAI TQRAQEVGHDLGVEVTVSQESYSATTHFNSAFNQRLQGVLPEAPILDSGAGHDAGILAGF VPSAMLFVRNPTGVSHAPEEACEEDDQRAGVKALADALAMEAGVQA >gi|294972017|gb|ADNU01000022.1| GENE 61 64124 - 65710 1555 528 aa, chain - ## HITS:1 COG:FN1406 KEGG:ns NR:ns ## COG: FN1406 COG2986 # Protein_GI_number: 19704738 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Fusobacterium nucleatum # 4 499 5 497 511 369 41.0 1e-101 MNPIALEPDELTFAQVVAVARENVPVELPEHVREEVAKTRTHVDDLAKAPKPVYGVSTGF GALAQRHIPHDLRSQLQKSLIRSHAAGMGEPVEPEVVRALMLLRARTLATGRTGVKVETL EAYVNLLNAGITPWVYEHGSLGCSGDLAPLSACALVVMGEGYVHDPEGGSEPVEAGPVLK AAGITPVELEEKEGLALINGTDGMLGMLIMALYDLEKLLTTADLTAAMSVEGQYGTDQVF RDELHHPLRPHPGQSASARNMLDALHASPIVKSHFDSTHLVQDAYSLRCSPQVTGAARDA ATFAAQVAAREIRAAVDNPVVLPNGEVSSNGNFHGAPIAHQLDFLSIVVADVASIAERRT DRFMDPARNQGLNSFLADDPGVDSGLMIAHYTQAAMVAETKRLAAPASVDSIPSSAMQED HVSMGWGAARKLRTAIENLTRVLAVELYAAARAIELREPEPGAVTGAVIAELRKDVPGPG TDRFMSPELAATYEFVRSGRALEVASGVHKFVHTLTDTDGTVLNGYAL >gi|294972017|gb|ADNU01000022.1| GENE 62 65751 - 67052 1156 433 aa, chain - ## HITS:1 COG:FN0740 KEGG:ns NR:ns ## COG: FN0740 COG1228 # Protein_GI_number: 19704075 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Fusobacterium nucleatum # 88 422 63 410 413 233 36.0 8e-61 MLIVTNISELVTNNPAPGATPADPHSDFLGVITDATLVVEDGKVAWAGPTSGLKAGHPQA AEVVATQARQAPSALQAKGQEGGEGHRVIDAAGQAVIPGFVDSHNHTVFAGDRSEEFAAR MAGESYSAGGIATTVKATRAASDDELEANLVRLMRQAQHSGTTTFEVKSGYGLDVESELK ALELAARHTDEVTLMAAHVVPAEFKDDPDAYVDLVINEMIPKATTHAKWIDVFCEEGAFT EEQTARILQAGIEHGLRPRLHANQLTDGGALQLAAKFKCASADHATFASDADLAAAAESG TVLTLLPSIEFSTRQPYPDARRYFEAGVTVAIASDCNPGSGFSSSIPFCLAIAVRDMHFT VDQALWAATEGGAKALEREDVGHLRPGARADFSILDAPSYRYLVYRPGVQQIGAVFCEGE LIASNPQPYSVFA >gi|294972017|gb|ADNU01000022.1| GENE 63 67060 - 68754 1843 564 aa, chain - ## HITS:1 COG:DRA0151 KEGG:ns NR:ns ## COG: DRA0151 COG2987 # Protein_GI_number: 15807820 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Deinococcus radiodurans # 4 556 2 552 558 705 64.0 0 MSFTRHDPTRVIRAPRGSEITAKNWQTEAAKRMLMNNLDPEVAERPEDLVVYGGTGRAAR SWEAYDQIVATLDDLEADETLLIQSGKPVGVLKTHEWAPRVLIANSNLVGDWANWEHFRK LEAEGLMMYGQMTAGSWIYIATQGILQGTYETFAAIARKRFDGTLAGTLTVTAGCGGMGG AQPLAVTLNGGACLIIDVEKERLERRKGKRYLDEVVTDLDEALKLVLDAKKERKPLSVGL VGNAAEILPTLLDRPEAAEVDIVTDQTSAHDPLSYLPVGVSVDDWQTEADDDPEKFTLRA EESMAKHVRAMVEFQDRGAEVFDYGNSIRDEARKAGYDRAFEFPGFVPAYIRPLFCEGLG PFRWVALSGDPKDIEVTDKALKELFPENESLHRWLDAAAEYVEFEGLPARICWLGYRERE KAGLLFNKLVAEGKVSAPIVIGRDHLDSGSVASPYRETEGMLDGTDAVADWPLLNALVNT SSGASWVSLHHGGGVGMGRSIHAGQVSVADGTDLAAQKLQRLLTNDPGMGVLRHVDAGYD RAIEVAEERGIRVPAVEKLNKRAD >gi|294972017|gb|ADNU01000022.1| GENE 64 69016 - 70752 640 578 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 72 503 19 436 456 251 34 1e-65 MNHHIFATAVNAAPSGLENLPSIDVLAESADAAEKAGIDQFLDKVFAPFAQVLSDIVFFA IPLPGGAELPVIVVWLMAAAIFLTVYLRFQPITGLGHSIEVIRGKLTRKTDPGEVSSFQA LATELSGTVGLGNIAGVAVAISVGGPGAALWIILFGLLAMSVKMAEATLGVKYREVRDDG TTAGGPMYYLKAGLAEIGRPKLGNFLAVFYAVAALIGVFGAGNLFQANQGAAVLVNATGG ESSWFADKMWLIGVIMAVLAGLVIIGGIKKIADYTSAITPLMAILYMIGTIAVIMVNFTN IPTAFAEMFTGAFTGEGVAGGFVGVAIIGIQRALFSNAAGVGSAGMAHSAVKTSRPATEG YTAMWEPLVDSVIVCTMTALAIITTGMYKQENDGSDAAGVELTATAFATVADWFPVLLTI CVILFAFSTVLSYSYYGQKAVDFLTGGSAVAQRIFQVVWILAIVVGASIGLESVVMFSDA MFFLMSVPNLLGIYFLAKILRQEILHHKVRADTGTLPEIPEDLQVGLRDHEPTKEQVSSE AKRIARKEAREDAVREAFHEKTEERARGRRLRKRGRKE >gi|294972017|gb|ADNU01000022.1| GENE 65 71117 - 72550 1548 477 aa, chain - ## HITS:1 COG:PA5099 KEGG:ns NR:ns ## COG: PA5099 COG1457 # Protein_GI_number: 15600292 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Pseudomonas aeruginosa # 1 474 1 467 480 421 50.0 1e-117 MADTKSSSGLVENRTIDWVPPNERHGTAFSQFTLWFGSNTQITAIVDGALAIAVFKSDAL WAIIALLIGNILGGTIMALHSAQGPTLGLPQMISSRAQFGVIGAIFPLVLVVLMYIGFAS TGAVLSGQAVNGILGITDSDFKWVGIVIFGILTAIIALLGYRYIHLLGRISSVTGLLGFL YLTAIVVITVDVPAVLANSEFSAPVFLSVVALSAGWQLTYGPYVADYSRYLPENTPRRAT FWFTFGGSVIGSQWSMTLGVLIAATAMSQGGDAFLDNQVGFIGDLAGGGVLALLIFIVIL LGKLTVNTLNAYGAFMCVLTIATSFRNRVSVTKLVRAIFVVSIVALTIVVALLASADFLA NFKNFVLALLMVFTPWSVVNLVDYYFVSKDRFDIPALYDRRGRYGDWNVGALVAYVVGVA VQIPFMDQTIYTGPLVEMLGGADVSWIIGIIVTTAIYYPWAKKTNVAPAQTIYPEAS Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:12:26 2011 Seq name: gi|294971895|gb|ADNU01000023.1| Brevibacterium mcbrellneri ATCC 49030 contig00025, whole genome shotgun sequence Length of sequence - 139293 bp Number of predicted genes - 131, with homology - 121 Number of transcription units - 56, operones - 28 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 367 126 ## COG2801 Transposase and inactivated derivatives 2 2 Tu 1 . + CDS 185 - 448 169 ## 3 3 Tu 1 . - CDS 364 - 681 263 ## jk0094 transposase for IS3504a + Prom 824 - 883 1.5 4 4 Tu 1 . + CDS 911 - 2437 1735 ## COG0516 IMP dehydrogenase/GMP reductase 5 5 Op 1 6/0.000 + CDS 2556 - 3440 797 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 6 5 Op 2 11/0.000 + CDS 3437 - 4138 690 ## COG0352 Thiamine monophosphate synthase 7 5 Op 3 1/0.083 + CDS 4189 - 5043 895 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 8 5 Op 4 . + CDS 5092 - 5847 914 ## COG0819 Putative transcription activator 9 5 Op 5 . + CDS 5928 - 7073 871 ## COG1062 Zn-dependent alcohol dehydrogenases, class III 10 5 Op 6 . + CDS 7094 - 8212 931 ## COG0516 IMP dehydrogenase/GMP reductase 11 5 Op 7 . + CDS 8240 - 9049 693 ## AAur_2859 hypothetical protein 12 5 Op 8 . + CDS 9080 - 9535 411 ## AAur_2858 putative integral membrane protein 13 5 Op 9 . + CDS 9569 - 11149 1338 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Prom 11151 - 11210 2.7 14 6 Op 1 7/0.000 + CDS 11252 - 11860 197 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 15 6 Op 2 . + CDS 11953 - 12552 545 ## COG1122 ABC-type cobalt transport system, ATPase component 16 6 Op 3 . + CDS 12549 - 13163 462 ## Asphe3_18300 ABC-type cobalt transporter, permease CbiQ - Term 13103 - 13132 0.3 17 7 Tu 1 . - CDS 13160 - 14287 808 ## COG0438 Glycosyltransferase - Prom 14495 - 14554 2.8 + Prom 14356 - 14415 6.0 18 8 Tu 1 . + CDS 14510 - 15208 589 ## gi|295395150|ref|ZP_06805358.1| conserved hypothetical protein 19 9 Tu 1 . + CDS 15332 - 16120 273 ## COG0101 Pseudouridylate synthase + Term 16139 - 16179 1.2 + Prom 16145 - 16204 1.7 20 10 Tu 1 . + CDS 16264 - 18510 2553 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Prom 18571 - 18630 2.2 21 11 Op 1 59/0.000 + CDS 18799 - 19242 641 ## PROTEIN SUPPORTED gi|62424144|ref|ZP_00379294.1| COG0102: Ribosomal protein L13 22 11 Op 2 . + CDS 19269 - 19760 572 ## PROTEIN SUPPORTED gi|239918169|ref|YP_002957727.1| SSU ribosomal protein S9P + Term 19806 - 19873 32.1 - Term 19812 - 19843 2.7 23 12 Tu 1 . - CDS 19919 - 20695 632 ## gi|295395155|ref|ZP_06805363.1| conserved hypothetical protein + Prom 20745 - 20804 4.1 24 13 Op 1 . + CDS 20837 - 22246 1378 ## COG1109 Phosphomannomutase 25 13 Op 2 . + CDS 22247 - 22696 439 ## gi|295395157|ref|ZP_06805365.1| hypothetical protein HMPREF0183_0863 + Term 22889 - 22939 -0.6 26 14 Op 1 . - CDS 22742 - 24619 185 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 27 14 Op 2 . - CDS 24643 - 25674 695 ## COG1072 Panthothenate kinase - Prom 25835 - 25894 2.3 28 15 Op 1 . + CDS 25802 - 27706 1845 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 29 15 Op 2 . + CDS 27740 - 28267 415 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Term 28269 - 28296 -0.1 - Term 28257 - 28282 -0.5 30 16 Tu 1 . - CDS 28289 - 31519 2771 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 31 17 Op 1 . + CDS 31639 - 32853 992 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 32 17 Op 2 1/0.083 + CDS 32855 - 34267 383 ## PROTEIN SUPPORTED gi|90022317|ref|YP_528144.1| ribosomal protein S15 33 17 Op 3 3/0.000 + CDS 34264 - 35418 849 ## COG0787 Alanine racemase 34 17 Op 4 12/0.000 + CDS 35415 - 35900 438 ## COG0802 Predicted ATPase or kinase 35 17 Op 5 20/0.000 + CDS 35897 - 36538 182 ## PROTEIN SUPPORTED gi|227411248|ref|ZP_03894449.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 36 17 Op 6 . + CDS 36535 - 36951 195 ## PROTEIN SUPPORTED gi|227407732|ref|ZP_03890964.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 37 17 Op 7 . + CDS 36954 - 37424 483 ## gi|295395169|ref|ZP_06805377.1| conserved hypothetical protein 38 17 Op 8 . + CDS 37421 - 38485 705 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 39 17 Op 9 . + CDS 38478 - 38951 407 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 38968 - 39020 4.8 - Term 38665 - 38692 -0.8 40 18 Op 1 . - CDS 38926 - 39114 162 ## 41 18 Op 2 . - CDS 39107 - 40042 504 ## Mjls_0086 hypothetical protein - Term 40255 - 40294 4.2 42 19 Op 1 . - CDS 40329 - 41477 1093 ## COG2170 Uncharacterized conserved protein 43 19 Op 2 . - CDS 41520 - 42380 488 ## COG2897 Rhodanese-related sulfurtransferase 44 20 Tu 1 . + CDS 42435 - 44045 1422 ## COG1472 Beta-glucosidase-related glycosidases + Term 44106 - 44145 -0.8 45 21 Tu 1 . - CDS 44097 - 45311 912 ## COG0500 SAM-dependent methyltransferases 46 22 Op 1 6/0.000 + CDS 45345 - 46205 582 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 47 22 Op 2 . + CDS 46202 - 47179 670 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 48 23 Op 1 . - CDS 47207 - 48016 555 ## gi|295395179|ref|ZP_06805387.1| peptidase M48 49 23 Op 2 . - CDS 48022 - 48336 305 ## CMM_2199 putative transcriptional regulator 50 23 Op 3 . - CDS 48432 - 50510 1827 ## COG1292 Choline-glycine betaine transporter - Prom 50597 - 50656 2.3 + Prom 50559 - 50618 2.4 51 24 Op 1 2/0.000 + CDS 50661 - 51008 148 ## COG0640 Predicted transcriptional regulators 52 24 Op 2 . + CDS 51005 - 52144 698 ## COG2814 Arabinose efflux permease 53 24 Op 3 . + CDS 52236 - 54032 1679 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 54218 - 54262 0.8 54 25 Tu 1 . - CDS 54296 - 54490 142 ## 55 26 Tu 1 . + CDS 54573 - 55091 -326 ## 56 27 Tu 1 . + CDS 55456 - 56217 290 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 56228 - 56282 -0.7 + Prom 56238 - 56297 2.6 57 28 Tu 1 . + CDS 56394 - 57635 655 ## BBMN68_496 hypothetical protein + Term 57678 - 57720 1.5 + Prom 57816 - 57875 2.3 58 29 Op 1 . + CDS 57921 - 59303 300 ## BBMN68_495 histidine kinase, dimerization and phosphoacceptor region 59 29 Op 2 . + CDS 59315 - 60004 450 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 60117 - 60176 2.0 60 30 Op 1 7/0.000 + CDS 60981 - 62951 1068 ## COG0515 Serine/threonine protein kinase 61 30 Op 2 . + CDS 62884 - 63513 281 ## COG0515 Serine/threonine protein kinase 62 30 Op 3 . + CDS 63516 - 63650 75 ## gi|295395192|ref|ZP_06805400.1| conserved hypothetical protein 63 31 Tu 1 . + CDS 63783 - 65624 482 ## COG1770 Protease II + Term 65788 - 65835 1.3 + Prom 65687 - 65746 2.1 64 32 Tu 1 . + CDS 65942 - 67321 214 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 65 33 Op 1 . - CDS 67960 - 68982 662 ## gi|295395195|ref|ZP_06805403.1| conserved hypothetical protein 66 33 Op 2 . - CDS 69015 - 69821 295 ## COG1349 Transcriptional regulators of sugar metabolism 67 33 Op 3 . - CDS 69857 - 69997 63 ## + Prom 69792 - 69851 2.2 68 34 Op 1 . + CDS 70018 - 70125 133 ## 69 34 Op 2 . + CDS 70192 - 70827 591 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 70836 - 70874 0.7 - Term 70820 - 70863 8.8 70 35 Op 1 . - CDS 70882 - 71391 367 ## REQ_22090 MarR family transcriptional regulator 71 35 Op 2 . - CDS 71434 - 71628 64 ## + Prom 71435 - 71494 2.1 72 36 Op 1 15/0.000 + CDS 71594 - 72685 1269 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 72697 - 72739 9.5 73 36 Op 2 24/0.000 + CDS 72759 - 74333 168 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 74 36 Op 3 26/0.000 + CDS 74330 - 75538 1254 ## COG4603 ABC-type uncharacterized transport system, permease component 75 36 Op 4 3/0.000 + CDS 75562 - 76812 1432 ## COG1079 Uncharacterized ABC-type transport system, permease component 76 36 Op 5 4/0.000 + CDS 76824 - 77207 301 ## COG0295 Cytidine deaminase 77 36 Op 6 7/0.000 + CDS 77209 - 78489 1285 ## COG0213 Thymidine phosphorylase 78 36 Op 7 . + CDS 78507 - 79220 820 ## COG0274 Deoxyribose-phosphate aldolase + Term 79239 - 79300 19.1 79 37 Tu 1 . - CDS 79312 - 79527 138 ## - Prom 79712 - 79771 3.4 + Prom 79561 - 79620 4.2 80 38 Tu 1 . + CDS 79712 - 79858 88 ## gi|295395206|ref|ZP_06805414.1| deoxyribose-phosphate aldolase - Term 79724 - 79772 2.2 81 39 Op 1 3/0.000 - CDS 79875 - 81683 1832 ## COG1109 Phosphomannomutase 82 39 Op 2 . - CDS 81691 - 82512 781 ## COG0005 Purine nucleoside phosphorylase - Prom 82565 - 82624 2.7 + Prom 82497 - 82556 1.9 83 40 Tu 1 . + CDS 82588 - 83580 838 ## AARI_09270 hypothetical protein + Term 83711 - 83765 1.0 - Term 83536 - 83565 -0.4 84 41 Op 1 . - CDS 83577 - 85598 2139 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 85 41 Op 2 . - CDS 85633 - 88968 1286 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 86 42 Op 1 . - CDS 89131 - 89568 393 ## gi|295395212|ref|ZP_06805420.1| hypothetical protein HMPREF0183_0918 87 42 Op 2 . - CDS 89534 - 90052 186 ## Bfae_20370 hypothetical protein 88 42 Op 3 . - CDS 90072 - 90482 322 ## Asphe3_25380 TadE-like protein 89 42 Op 4 . - CDS 90490 - 90717 225 ## gi|295395215|ref|ZP_06805423.1| conserved hypothetical protein 90 42 Op 5 . - CDS 90732 - 91670 856 ## COG2064 Flp pilus assembly protein TadC 91 42 Op 6 . - CDS 91667 - 92539 479 ## Asphe3_25410 Flp pilus assembly protein TadB 92 42 Op 7 . - CDS 92536 - 93762 964 ## COG4962 Flp pilus assembly protein, ATPase CpaF - Prom 93788 - 93847 5.0 + Prom 93786 - 93845 1.6 93 43 Op 1 . + CDS 93953 - 95083 1239 ## COG1186 Protein chain release factor B + Term 95090 - 95123 -0.4 94 43 Op 2 . + CDS 95156 - 95626 499 ## COG0691 tmRNA-binding protein + Term 95760 - 95811 -0.4 - Term 95937 - 95963 -0.7 95 44 Tu 1 . - CDS 96154 - 96651 123 ## - Prom 96706 - 96765 2.2 96 45 Tu 1 . + CDS 96842 - 97159 113 ## gi|295395221|ref|ZP_06805429.1| conserved hypothetical protein + Term 97291 - 97334 11.6 97 46 Tu 1 . + CDS 97335 - 97565 196 ## gi|295396744|ref|ZP_06806884.1| hypothetical protein HMPREF0183_2382 + Term 97640 - 97676 3.1 - Term 97471 - 97523 9.7 98 47 Op 1 . - CDS 97590 - 97844 221 ## cauri_1767 hypothetical protein 99 47 Op 2 . - CDS 97847 - 98029 215 ## cauri_1767 hypothetical protein - Prom 98066 - 98125 1.5 100 48 Tu 1 . - CDS 98192 - 99127 569 ## COG4823 Abortive infection bacteriophage resistance protein - Prom 99206 - 99265 4.1 + Prom 99410 - 99469 1.7 101 49 Op 1 38/0.000 + CDS 99499 - 101157 1795 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 101197 - 101252 8.2 102 49 Op 2 49/0.000 + CDS 101279 - 102283 249 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 103 49 Op 3 13/0.000 + CDS 102280 - 103278 729 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 104 49 Op 4 . + CDS 103283 - 104944 697 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 105 50 Tu 1 . - CDS 104903 - 105172 60 ## 106 51 Op 1 . + CDS 105409 - 105687 354 ## gi|295395229|ref|ZP_06805437.1| conserved hypothetical protein 107 51 Op 2 . + CDS 105684 - 108749 2333 ## ROP_13810 hypothetical protein 108 51 Op 3 . + CDS 108778 - 112290 3023 ## RHA1_ro01687 hypothetical protein 109 51 Op 4 . + CDS 112291 - 114990 1993 ## RHA1_ro01686 hypothetical protein 110 51 Op 5 . + CDS 114990 - 116924 1185 ## Mjls_0037 hypothetical protein 111 51 Op 6 . + CDS 116924 - 119815 1393 ## RHA1_ro01684 hypothetical protein 112 51 Op 7 . + CDS 119812 - 120798 654 ## gi|295395235|ref|ZP_06805443.1| hypothetical protein HMPREF0183_0941 113 51 Op 8 . + CDS 120800 - 121981 699 ## ROP_13750 hypothetical protein 114 51 Op 9 . + CDS 121986 - 122870 594 ## gi|295395237|ref|ZP_06805445.1| conserved hypothetical protein - Term 122859 - 122912 20.1 115 52 Op 1 . - CDS 122931 - 123944 979 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 116 52 Op 2 . - CDS 124014 - 124886 978 ## gi|295395239|ref|ZP_06805447.1| TPR repeat protein 117 52 Op 3 . - CDS 124883 - 125869 804 ## RSal33209_3456 hypothetical protein 118 52 Op 4 . - CDS 125866 - 126840 799 ## Asphe3_21530 von Willebrand factor type A-like protein 119 52 Op 5 . - CDS 126831 - 127280 451 ## gi|295395242|ref|ZP_06805450.1| conserved hypothetical protein 120 52 Op 6 23/0.000 - CDS 127267 - 128103 684 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 121 52 Op 7 . - CDS 128133 - 129113 889 ## COG0714 MoxR-like ATPases + Prom 129430 - 129489 1.8 122 53 Op 1 11/0.000 + CDS 129668 - 129919 268 ## COG0695 Glutaredoxin and related proteins 123 53 Op 2 18/0.000 + CDS 129920 - 130333 288 ## COG1780 Protein involved in ribonucleotide reduction 124 53 Op 3 24/0.000 + CDS 130303 - 132465 2129 ## COG0209 Ribonucleotide reductase, alpha subunit 125 53 Op 4 . + CDS 132493 - 133467 1042 ## COG0208 Ribonucleotide reductase, beta subunit + Term 133489 - 133526 10.1 - Term 133525 - 133560 -0.5 126 54 Tu 1 . - CDS 133575 - 134561 1085 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 134609 - 134668 3.5 - Term 134635 - 134675 13.6 127 55 Op 1 12/0.000 - CDS 134735 - 135508 940 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 128 55 Op 2 10/0.000 - CDS 135505 - 136551 1236 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 129 55 Op 3 . - CDS 136552 - 137715 1167 ## COG1960 Acyl-CoA dehydrogenases 130 55 Op 4 . - CDS 137769 - 138263 351 ## COG1846 Transcriptional regulators + Prom 138221 - 138280 2.0 131 56 Tu 1 . + CDS 138358 - 139062 576 ## COG2135 Uncharacterized conserved protein Predicted protein(s) >gi|294971895|gb|ADNU01000023.1| GENE 1 1 - 367 126 122 aa, chain - ## HITS:1 COG:MT2881 KEGG:ns NR:ns ## COG: MT2881 COG2801 # Protein_GI_number: 15842353 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 11 110 2 99 294 74 45.0 4e-14 MIRFIDEYRNRFCVEFICKTLKNSRAGGFITSRGYRQSKARGLSARRLRDAVLVERISTV HRDNYGVYGVRKMWHALRRDGIDIGREQTARLMRLAGVSGKSKGRVPRTTCKPNVPDLRP DL >gi|294971895|gb|ADNU01000023.1| GENE 2 185 - 448 169 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHCTNAFNQHSVTKTTSTESTGFGLAITTRGDEPTSPAILQRLTDELDTETIPILINEPD HFRRFGSSSEAKKAEAAFSSSFVSRSS >gi|294971895|gb|ADNU01000023.1| GENE 3 364 - 681 263 105 aa, chain - ## HITS:1 COG:no KEGG:jk0094 NR:ns ## KEGG: jk0094 # Name: tnp3504a1 # Def: transposase for IS3504a # Organism: C.jeikeium # Pathway: not_defined # 1 105 1 105 105 159 92.0 5e-38 MPRKFDQDAKDRVVRLVEDRFLAENMSMQAACQAVAPKLGVSWHTARQWTQQARRAGKIS EPMPEDLVAENARLRRENQELRDTNELLKAASAFFASELDPKRRK >gi|294971895|gb|ADNU01000023.1| GENE 4 911 - 2437 1735 508 aa, chain + ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 216 506 1 292 292 349 62.0 6e-96 MSEVEQHFREAENPFSLTGLTYDDVLLLPGDTDVIPSEASTRTRLTRELDINIPLISAAM DTVTESRMAIAMARIGGIGIIHRNLSKEDQAAQVDYVKRSESGMITDPVTITADKTLQEL DEMCGQYRISGLPVVDDNDVLVGIITNRDLRFVPRAEFTTTTVGEVMTKSPLITAPVGVS SEEAFELLAEHKIEKLPLVDDNNVIRGLITVKDFVKSEEYPLASKDSEGRLLVGAAVGFY GDALERAGLLAEAGVDVLVVDTANGHARGVTDMIKTLKKDPAFSNVQVIGGNVATREGAQ ALIDAGADAIKVGVGPGSICTTRIVAGVGVPQVTAIHLAYQAAREAGIPVIGDGGLQYSG DIGKALVAGADSVMLGSLLAGCKEAPGELLLVNGKQYKTYRGMGSLGAMAPRKGRSYSKD RYFQADVATDTDLIPEGVEGRVAYRGELKNVAYQLTGGLRQTMFYVGARTIPELKAQGRF VRLTAAGLKESHPHDIQMTVEAPNYQSR >gi|294971895|gb|ADNU01000023.1| GENE 5 2556 - 3440 797 294 aa, chain + ## HITS:1 COG:Cgl1429 KEGG:ns NR:ns ## COG: Cgl1429 COG2145 # Protein_GI_number: 19552679 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Corynebacterium glutamicum # 20 279 9 254 268 158 46.0 1e-38 MTSVSESRTGNASEFTPAFLTHMRELTPLVQCITNTVVQEVAANILLASGASPAMVDHEA DAAAFAKVANGVSVNFGTPSSHTYLSIDAAVQQRTEDGTTWVLDPVGLGVAPFRTARVFR ALSERPTVVRGNASEVAGLAGMGQGARGIEAVDDVESALPAASKISNEYGSVVAISGPTD AIVTTIDGTTYVSHVEGGSTYMPLVVGTGCSLGALVAGYAGTAHHFLGESATTEEKLTRY HQATVTAHAHFAAAGLRAHELADGPGSFKVHFLDQLHEVTETDLHAINVTTEEL >gi|294971895|gb|ADNU01000023.1| GENE 6 3437 - 4138 690 233 aa, chain + ## HITS:1 COG:CAC0495 KEGG:ns NR:ns ## COG: CAC0495 COG0352 # Protein_GI_number: 15893786 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Clostridium acetobutylicum # 6 229 1 203 211 123 34.0 3e-28 MTNPRLKDIDGSLYFITDTKMCEQAGRTVAQTVELAVAGGAGIVQVRDKHATDATFAELT LSVLEAVENARSAYNITRPVPVFVNDRVDVAASLINDGHDIHVHVGQDDTSVPRVRELIG NSPLIGLSANTPEEIEVARTHGDFGNGGVDLLGVGPVWDTATKEGAPAGLGIDTLKNLTA ISAIPVFAIGGINAERAAQLKDTSVSGVCVVSAICLAADPQAEAHKIYDAFRN >gi|294971895|gb|ADNU01000023.1| GENE 7 4189 - 5043 895 284 aa, chain + ## HITS:1 COG:YPO2859 KEGG:ns NR:ns ## COG: YPO2859 COG0351 # Protein_GI_number: 16123052 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Yersinia pestis # 8 277 7 261 266 234 53.0 2e-61 MSRPPVALSIAGTDPSGGAGVHADLKTFTALRAYGTSVITALVAQNTHGVSRVYGIDTDF VSDQFDSVLTDMPVDATKTGMLGTRQLVEMVAERAGRGGLGFLVVDPVMVATSGHRLLEE DAVDAVRTLMVPAAHVITPNLPEAALLLGDDVEPAHDLDTMRYQARELIERGARGVLVKG GHGEGDEVLDVLALNDGTDVTLTEYRHQRITTPNTHGTGCTLSAAITALAARQALEGTLD VPEVVGTALDYLARALESGKDWTLSLDPNGAHGPVDHMVTIPTP >gi|294971895|gb|ADNU01000023.1| GENE 8 5092 - 5847 914 251 aa, chain + ## HITS:1 COG:Cgl1428_3 KEGG:ns NR:ns ## COG: Cgl1428_3 COG0819 # Protein_GI_number: 19552678 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Corynebacterium glutamicum # 27 241 1 199 210 122 35.0 9e-28 MTATTSAAEIGRELRNLYVAGPRTQALWDSCDDIITATENLTYLQELAAGDLDARAFTNY LIQDEIYLDGYARTMLLLGHRAATNDDMRFWATSAGTAVAVENEMHEALLASDEFSHHIA ELNDENGKPVASPTTLGYVSFLMATATTEPYEVGVAGVLPCFWVYAHVGKVLTRLVGDGM ATHPYKQWIEEYDSEDFDAGTREAVKILERELENARPAEREKMEKTFRQACMYELHFWAS ARVVERFELVK >gi|294971895|gb|ADNU01000023.1| GENE 9 5928 - 7073 871 381 aa, chain + ## HITS:1 COG:MT0171 KEGG:ns NR:ns ## COG: MT0171 COG1062 # Protein_GI_number: 15839541 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Mycobacterium tuberculosis CDC1551 # 3 380 15 379 383 344 57.0 2e-94 MKITGAVLREMRAQRPYAQSRPIDITSVELDEPGPHEVLIRMTAAGLCHSDLSVVDGNRP RPLPMLLGHEGAGVVEKVGEGVTEFTPGDHVVTVFLPRCGQCANCATDGKLPCTPGTASN NAGVLPFDGEIRRLSESGDSTHPRAGQPGEPINHHLGVSVFATHAVVNAASVVKVGSDVP PQIAAPLGCAVLTGGGAVLNAGKPAPGDDIMVVGLGGVGMAALLTALSVGTEEVIGVDAN PEKLERARKLGASQVYTPAEVAEAGVKAPVVIEAAGHPKAFETAYSATAVGGTTVTVGLP APDAISQIHPLTLTAEARTVVGSYLGSAVPSRDIPQYEQMWREGKLPVEELVSGIVRLDD INAAMDTLADGKAVRQVVLFD >gi|294971895|gb|ADNU01000023.1| GENE 10 7094 - 8212 931 372 aa, chain + ## HITS:1 COG:slr1722 KEGG:ns NR:ns ## COG: slr1722 COG0516 # Protein_GI_number: 16330504 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Synechocystis # 5 370 3 368 387 340 50.0 2e-93 MSNEVEIGRGKRGRRSYSLDDVAVIPARRTRDPQDVSLAWQIDAYHFELPFIGAPMDSVV SPATAIALGKFGGLGVLDLEGLWTRYEDPQPYLDEIASLPEDQATVRMQEIYSEPVKAEL ITARLKEIREAGVTVAGALTPQRTQEFWKTVVEAGVDLFVIRGTTVSAEHVSSEAEPLNL KRFIYELDVPVIVGGAATYTASLHLMRTGAAGVLVGFGGGAASTTRRTLGIHVPMATAIA DVHAARRDYMDESGGRYVHVIADGGLGTSGDIVKAFAMGADAVMLGSTLSRAEEAPGQGF HWGAEAHHPHLPRGRRVEMGTVAPLEQLLFGPGHSAVGEVNLAGALRRSMATTGYLDLKE FQRVDVTVAPYV >gi|294971895|gb|ADNU01000023.1| GENE 11 8240 - 9049 693 269 aa, chain + ## HITS:1 COG:no KEGG:AAur_2859 NR:ns ## KEGG: AAur_2859 # Name: not_defined # Def: hypothetical protein # Organism: A.aurescens # Pathway: not_defined # 8 247 3 245 284 153 38.0 1e-35 MLRLAFTPRWIGRFVLVLALATAFVFLSMWQVDRAQHKNDVQTSAYADDKTPLNEVVSAQ VPMPSRDTDRLVEVSGSYVPEATVLVEGRHQNGQAGFWVVTMFTVDHAQLGGGLSGDKPV AIPVVRGFTADEATARNSQAPSGTHTLVARIGPTEAPEPSVGDKVVTTVSTAQLVNYFDV YSYGAMLFPEPDQRAQASGPELEHVTFHAQESGGLDVQSAFYAVEWLVFAGFAFYIWWRL LRDEYRRQTKDEHQHFVVVKKPGQKNLDN >gi|294971895|gb|ADNU01000023.1| GENE 12 9080 - 9535 411 151 aa, chain + ## HITS:1 COG:no KEGG:AAur_2858 NR:ns ## KEGG: AAur_2858 # Name: not_defined # Def: putative integral membrane protein # Organism: A.aurescens # Pathway: not_defined # 31 141 30 156 166 99 40.0 3e-20 MQDPQDQRPEFDEHAHDPETVFTVSRYTSARNAERFYRVMALITGTMLMILTLEMIYKYI ITPLMGGDPSTALLIGNFNLGAAIAICHGWCYVVYLVASWWLTSSMKWSLRRMLVLALAG VVPVMSFIWERKVHHEVERRLDEAVVIAPAD >gi|294971895|gb|ADNU01000023.1| GENE 13 9569 - 11149 1338 526 aa, chain + ## HITS:1 COG:ML0395_2 KEGG:ns NR:ns ## COG: ML0395_2 COG0519 # Protein_GI_number: 15827120 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Mycobacterium leprae # 202 526 2 325 325 491 75.0 1e-138 MQPSIPTASRPVLVVDFGAQYAQLIARRVREAGLFSEVIPHTAPAQDFVDRNPVAIVLSG GPSSVYAEGAPRLDPEVFELGVPMFGICYGFQSMAHNLGGKVAHTGSREYGSTPLTVAGS SQLLDGQPENQTVWMSHSDSVAEAPEGFTVVASTPGAPVAAFECAERKLAGVQWHPEVLH SEYGQATLENFLHSIASLEPTWTAGNVIDEQVELIRQQVGDKQVICALSGGVDSAVAAAL VHKAVGDQLTCVFVDHGLLRKDERKQVEQDYVASTGVRLVTVDAADQFVNELAGVTDPET KRKIIGREFIRVFETAAADLVAQSRNDAEPIEFLVQGTLYPDVVESGGGSGTANIKSHHN VGGLPEDLQFKLVEPLRALFKDEVREIGRELGLPEVIVGRQPFPGPGLGIRIIGEVTRDR LDVLREADAIAREELTRAGLDDSIWQCPVVLLADVRSVGVQGDGRTYGHPIVLRPVSSED AMTADWTHVPYDVLSTISNRITNEVDEINRVVLDITSKPPGTIEWE >gi|294971895|gb|ADNU01000023.1| GENE 14 11252 - 11860 197 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 22 193 8 175 190 80 33 4e-14 MSTSTAPETRRAPQPRSVGMDVAYIAVFAALIWVSALIPPIPVGGVGVPITVQTLTIAIT GMVLGAWRGFAATGLYIVLGLIGLPVFAGGSGGLGALAGPSAGYLVSFPFFAGLIGLLAQ ISVKKLTGVKLWLALVGAALVARYLIVWPIGAFGIHLNGGVPLGAAFLADIPFWPGDLVK NILAGAIALMIHRAFPTVLVRR >gi|294971895|gb|ADNU01000023.1| GENE 15 11953 - 12552 545 199 aa, chain + ## HITS:1 COG:SMc00962 KEGG:ns NR:ns ## COG: SMc00962 COG1122 # Protein_GI_number: 15964643 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Sinorhizobium meliloti # 4 194 32 220 226 145 41.0 5e-35 MTSVIGPNGSGKTTFLQMINGLMAPTSGDVRVGELSVTQNLKDVRKRVGFVFSDPAAQLV MPTVVEDVQLSLRHLPKAERKPAAMAMLTELGVEDLASRSVYELSGGQRQLVALATVLAV DPEVLVLDEPATLLDLKNTLLLRRTLRELVDRRGVQVVFSTHDLDFALDGHECVFIDGGQ VCGKGAPAEVVAEYRASVA >gi|294971895|gb|ADNU01000023.1| GENE 16 12549 - 13163 462 204 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_18300 NR:ns ## KEGG: Asphe3_18300 # Name: not_defined # Def: ABC-type cobalt transporter, permease CbiQ # Organism: A.phenanthrenivorans # Pathway: ABC transporters [PATH:apn02010] # 1 202 1 202 207 88 31.0 2e-16 MRRRQQFLGVCSPRRGWLHATPVGLKFASLTVLTLVVMLARNPFVNAGLIVALVIIGLTA KMGLGQILGPIRRMWLIFVLLVAFHVFLSDWWNAARIITVMITCVVGAQIFMLSTPLSVL LDLFNMLVKPLKFVGVRPQVPALAAAIAVRSVSYLADLADTAKDAASARGLENDIRARTV PVMLGAVKYAQDTGRALEARGILD >gi|294971895|gb|ADNU01000023.1| GENE 17 13160 - 14287 808 375 aa, chain - ## HITS:1 COG:Cgl0462 KEGG:ns NR:ns ## COG: Cgl0462 COG0438 # Protein_GI_number: 19551712 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 351 17 369 407 298 45.0 2e-80 MVHTVVRVLEHLAERGDDVIVIAPGTRHDSPTELSGARIIRVPSFAMPRYRKVRVAPGGV PRIRRILADYDPDVVHLASPFVLGWRGVLAAQDLGIPSVAVYQTEVPAYAARYGLRGVEN LMWNHVRNIHQHASLTLAPSSFTIDQLHSHGVADVRLWARGVDSTRFDPSHRSEEWRARM SPEGKKIVGFVGRLAVEKQVEDLVRLGNIPNVQLVIVGEGPQRARLQQLLPNAVFTGFLG GDALAQAVASFDVMVSPGEFETFCQTIQEAMASAVPVVAPARGGPLDLVDHSRTGWLYTP GDLAAMEDHVRDLVGDDAKRVAFGEAARKVVLGRTWKSVCSQLVGHYAAAIDSPAPQVIG RSLIGAPRWAQDRVS >gi|294971895|gb|ADNU01000023.1| GENE 18 14510 - 15208 589 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395150|ref|ZP_06805358.1| ## NR: gi|295395150|ref|ZP_06805358.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 232 26 257 257 447 99.0 1e-124 MTWALAILLIVLVIVAVIAIGLVVRNNQLSLARDLCLEALRQVNVQREQRHALVPGFVSL ARSCRDNDGKRNGVVSASVEQCDEAGRELSAALTQAVSVGTEESATPGDTTASVGPAEDQ LTSAIDALAHAARVPGEVTDADETCRIQLHDLYEHLLMVEHRLSAAVRYYNMVVTQYSTM RSSWVSRPLTGVYRKFAHIAYTPNDFSDNVPNTLRVPEREKGTGYRPGSVFG >gi|294971895|gb|ADNU01000023.1| GENE 19 15332 - 16120 273 262 aa, chain + ## HITS:1 COG:MT3562 KEGG:ns NR:ns ## COG: MT3562 COG0101 # Protein_GI_number: 15843050 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 3 259 49 295 297 155 43.0 7e-38 MQGELETALARILSAPVRVTVAGRTDAGVHARRQVVHVDIPHTDFPRLVGQPRARAEQRT PARGLTSRLRGVLARQDASDIVIHDVTAVHADFDARFSALWRSYTYRLADPQAFTDPLTA AFTVEHRAELDVAAMSAAAQQVCGLRDFLPFCKPREGSTTIRTLEELRVERVGSGVIEFF LRADAFCHHMVRALVGGLVKVGEGKWGPGRLAGMCEEAGRGGSEFPMFVFPAHGLVLEDV GYPEPGEWAVRNQQTRARRDAD >gi|294971895|gb|ADNU01000023.1| GENE 20 16264 - 18510 2553 748 aa, chain + ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 10 556 18 546 694 206 31.0 1e-52 MKRTTRAFAAVSALAVVSPLGTLPAFGTADKGTEFQILNITDFHGRIGSGIGADLAGAVT DNRQENSTFLSAGDNIGASTYASSSQQDNPTLEYLDALGLDASAVGNHEFDRGFDDIKSR NTKFEHLGANVVKKGTDEPAFPAYTTYDVNGVKVAVIGVVTTDTKTLVSPSGIKGIDFID PVKAVNKAAKELEASDEKPDITILEAHTGPSSAGSIEEATGSNDEFASLVEKADPSIDAM FFGHSHIKMNLTAKIPGTDRTRPVVQAGNYGNALADVRLTSEGNGDWTLKSSELIDVKGK ATESNVPADVKKIIDDAEAKAQEVGSVKAGEITEDITRAFKEDGSEDRGAESTLGNLVAD ALKEGVTYSNLEEADFGITNPGGLRTDMKMDDYFGEGKLKEDKGVVTDGELNQVLPFAND HGVVTMKGEDVIELFAQQWQPAEASRPFLHLGISKELSVVYDSSAKDPAKRVKSVKVNGE DIDPAKEYRVATLSFLANGGDNFGAFAKGKFEQSGLTDFEIWQKYFEKNSPVSPDKKERQ ADFAHDILGNGSATAEVHTPDTTKNNFYLKIDSKVEAENLLFTVEAPKGYDVEWEDSKVI EGTKNTVRVDKVKAGETQVKFRLVRNSDKTDGAKEFNTTLVADPAAKWWDNNPLPILRET KVGFVSEEKPGDDSDEATPGDGGQDDKGKDKDGSDKGKEGSDKGKDTDASDGKPLPRTGT ETAGMIAAGIALLAVGATAVGLTRARRK >gi|294971895|gb|ADNU01000023.1| GENE 21 18799 - 19242 641 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62424144|ref|ZP_00379294.1| COG0102: Ribosomal protein L13 [Brevibacterium linens BL2] # 1 147 1 147 147 251 81 1e-65 MRTYTPKPGDIERQWHVIDATDVVLGRLASQAARLLRGKHKVTFAPHVDTGDYVIIINAE KVALTGAKLEQKRAYRHSNYPGGIKSVNYAELMATKPVLAVEKAVAGMVPKNRLGREQMR KLKVYAGPEHPHASHNPQTYEISQVAQ >gi|294971895|gb|ADNU01000023.1| GENE 22 19269 - 19760 572 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239918169|ref|YP_002957727.1| SSU ribosomal protein S9P [Micrococcus luteus NCTC 2665] # 1 163 1 162 162 224 68 1e-57 MAENINEEVELTEYSTETPAGQGEAATGGRGQSLTAPGAGVGRRKQAIARVRLVPGSGEW NINGRDLATYFPNKLHQQLVNEPFRLLDLEGRFDVFVRLQGGGPSGQAGAVRLGIARSLN EIDRENNRPELKKAGFLTRDARVPERKKAGLKKARKAPQFSKR >gi|294971895|gb|ADNU01000023.1| GENE 23 19919 - 20695 632 258 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395155|ref|ZP_06805363.1| ## NR: gi|295395155|ref|ZP_06805363.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 258 1 258 258 443 100.0 1e-123 MNKLYVFTSLTTLFATTSLALYCAVLFFPQEPANPIVNGFGIGLLVLIPGVIACVPYLFH LTHSLHRLTWAGSSLLALVAVGLFTLIIDAESDLWVFFVGQAFVLGGYALTLALEHRSER ERRITLTVVRVLGVVAIVLPTIGALSISMPAGFQISAFITPVLLIACAACFGLNVRINGF PVGYALPVVIGVIALLSLAVIESFIVLGVWTLGTMCLSAGMVALAIDSTLPQAAHNANPE EPRTPKPKTPQTTGSTSA >gi|294971895|gb|ADNU01000023.1| GENE 24 20837 - 22246 1378 469 aa, chain + ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 20 469 1 447 448 387 47.0 1e-107 MSVPLAALEQTVVDVKVRLMGRLFGTDGVRGRANRDITARLALQLSVAASRVLAKPEQAV NHRPRAIVGRDTRISGDFLSAAVAAGIASTGVDVWDAGVLPTPGVAYAVKATGAEFGVVL SASHNPMPDNGIKFFGPGGTKLDDAIEDEITALVDVNWDRPTAEAVGRIQRYPAAADEFT EHLVAGLGEEVTPLKGLTVVVDCAHGAASVVGPAALRQAGADVIVTAAEPTGLNINDGVG STHIDNLQRAVIEQSADLGVAFDGDADRCLAVDARGREVNGDQIMGILAIGLKEDGALAH DTLVTTVMSNLGLRLAMERYGIDTVQTAVGDRYVLERMKADGYSLGGEQSGHILMLDHGS TGDGVQTALHLMHRMATSKRTLADLAAEIPNLPQVLINVKDVDKSRTADPVVAAEVTAVE KELGTTGRVLLRASGTEPVIRVMVEAESEEVAQQQAQRLADVVKPQLAL >gi|294971895|gb|ADNU01000023.1| GENE 25 22247 - 22696 439 149 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395157|ref|ZP_06805365.1| ## NR: gi|295395157|ref|ZP_06805365.1| hypothetical protein HMPREF0183_0863 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0863 [Brevibacterium mcbrellneri ATCC 49030] # 1 149 1 149 149 209 100.0 7e-53 MTPRFVTAIAAAGATAVSTLITSAVSLALRPVTHDGLLFVFSRLTTSVLVVGAIAAGLAL IFGFVRANYPGHPAARNPGNPKWLALTALFVAVGPPVIMYMLTVMWLTNAMYVGALALLV GLIAGPLFAVAMRPMSRLISEPGAAGKKA >gi|294971895|gb|ADNU01000023.1| GENE 26 22742 - 24619 185 625 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 399 605 21 224 305 75 31 1e-12 MSNISPHMVLRRATAAQKYGGKSQSVSWSTVGRIFIFARRHRGRMVAYVLLSALAALLGV ITPTLSGRVVNAITDGGPVSTIVWLAVAMGAIALLDAALSLINRWFSAQVGEGLIFDLRT AVFDHVQTMPVAFFNRTRTGALISRLSTDVMGAQRAFANTLPSVASNLVALLLTLGVMFA YSWQVTVLSLVLLPIYLLPARFLASKLATLQFEASDLNAAMSTRMTERFNAGGATLVKLF GSPDRESAQFAQRADRVRAIGVRTAMLQTTFVTALTLVSALALALVYGLGGFEAVQGQLN AGMVVTLAMLLTRLYAPLTMLANARMDFVSAVVSFERIFEILDLKPIITEPAHPHALPRG ALSVEFDDVRFTYPTSAEVSLASLEDVAALDTRESAEVLHGISFTVPAGSTVALVGSSGA GKSTIASLVPRLYDPTSGCVRLGGIDARDLAFADLKAGVGMVTQDGHLFHDSIRENLLLA KPNATDEEIQSALHRARMDRVVEALPDGVDTVIGERGYRLSGGERQRLTIARLLLAAPPI VVLDEATSALDSTNEVAVQQALNEAMTGRTAIVIAHRLSTVRSASQILVVEGGHIVERGS HSELLSAGGRYAELYETQFADQETT >gi|294971895|gb|ADNU01000023.1| GENE 27 24643 - 25674 695 343 aa, chain - ## HITS:1 COG:YPO3758 KEGG:ns NR:ns ## COG: YPO3758 COG1072 # Protein_GI_number: 16123895 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Yersinia pestis # 25 342 7 316 316 324 49.0 1e-88 MWAMNALTNLDPARRLAGLRPDSDSLPSPYWLFDRESWAALAETTSSPLTEKEVERLRGL GERIDLDEVRSVYLPLSELLSVYVAARGNKYQMTREFFTPLREKGKDVTPKRTPFVIGVA GSVAVGKSTTARLLREMLSRWPDTPRVELITTDGFLFPNAELERRGIADRKGFPESYDRR RLLRFLAKIKAGAPEARAPVYSHHTYDIIDGAEVTVRSPDVVIVEGLNVLQAPRPRPDGR IGVAVSDYFDFSVYVDANTSDIREWYIRRFLRLQEGAFSRPDSYFHKYSQLTREEAVTLA GEIWDSINAPNLSQNVLPSRGRADLILKKASDHKVKSIQLRKL >gi|294971895|gb|ADNU01000023.1| GENE 28 25802 - 27706 1845 634 aa, chain + ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 634 3 625 625 848 67.0 0 MCGIVGYVSTSRAQFAGGSEQATAGRDHSAIDVVMGGLKRMEYRGYDSAGVALATPGQPL FSEKKSGKLSNLKDVLETHQIPDATTGIGHTRWATHGGPTDQNAHPHLADDGKLALIHNG IIENFAPLKERLEAEGAQFVSETDTEVAAQQLAKNYRETGNLTEAMRITATQLEGAFTLL AIHQDVPDTVVAARRNSPLVVGLGDGENFLGSDVAAFIDYTRDAVEIGQDQIVTITPDSV DIIDTDNNPVEGKSYTVDWDPATAEKGGFASFMDKEIHDQPQAVADTLLGRMDQHGHLQL SEMNIDESVLKSIDKIVVIACGTAAYAGQVARYAIEHWCRIPTEVELAHEFRYRDPVVTE KTLVVAISQSGETMDTLMAVRHAREQGAKVIAICNTYGSTIPRESDGVLYTHAGPEIAVA STKAFLAQIVACYLLGLYLAQLRGNKYQDEIKVILDELEQVPSKIERLLDESKQQVVDLA QSMQDTTSVLFLGRHVGYPVAMEGALKLKELAYIHAEGFAAGELKHGPIALIDEGQPVFI VVPSRASRYSLHDKVVSNIQEVRARGANTIVIAEEGDTAVEQFASEVIYVPATPTLLAPL LTTIPLQIFAMALASAKGLDVDQPRNLAKSVTVE >gi|294971895|gb|ADNU01000023.1| GENE 29 27740 - 28267 415 175 aa, chain + ## HITS:1 COG:mlr7761 KEGG:ns NR:ns ## COG: mlr7761 COG0736 # Protein_GI_number: 13476440 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Mesorhizobium loti # 3 130 2 136 137 64 34.0 9e-11 MAIIGIGVDIADVERFREHIERVPELLDRLLTPAEQLKKNGQRRTPESLAARFSAKEALV KALQLPQIIPWHEAEIVSAFTGAPSFRLSGWVLQHFRDMGGETIHVSITHDAGRTVTFVV AEGNPVHSHPPVDQPAPLLPGSSEALAALAEFRQRAEETREARRKAREEARRNAE >gi|294971895|gb|ADNU01000023.1| GENE 30 28289 - 31519 2771 1076 aa, chain - ## HITS:1 COG:Rv2006_3 KEGG:ns NR:ns ## COG: Rv2006_3 COG1554 # Protein_GI_number: 15609143 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Mycobacterium tuberculosis H37Rv # 262 1069 2 786 795 508 38.0 1e-143 MTEVLTATPPFDAVIFDMDGVVTDTASLHAVAWKQLFDSALANPQLKDAAVEFPEELNAS EFSVATDYRAYVDGRPREDGVREFFASRGITLPEGDDDDPAGALTVHGLARHKNDAFNEE LKKQGVRTFPGTINLIERLRAGGRKIGLVTASRNAPALLNNAQITELFDTIVDGQTALDE NLPGKPQPDTFLRAANNLGAEPRNAVVVEDAISGVQAGRAGKFGLVVGVDRHGHRDELID AGADVVIGDLHELDLGERRDRPRTLVYVGGEDHHKGKRATLTTLGNGYMAIRGTASEIKT GHRGAPGAYIAGIFNRLTSTVQRRTQVHESMVNLPHWAALDVKFADGEWLSDRGLTVVSE ERTLNFDDGALVRHLVVQDRHGRSLKLCQRRIVSMDKQHLSATLTRVETLSDEPQTVHVR LGIDARVNNDNVAEYDQLAKQHIETRHAKVLEDGTLLTEVITEQSRTRVAMAQRTRVTER RVDFSTQRVPGETMGYDVETVSEENERGKAIYREHAFTVHPGHAFDFDTVTSTVHSRDPA LSSVRGGAVQHLDWLPDCSFTALLPGHRAALAKLWDRFGVEVDTTSGAADQTQLMVDLHT FHLIQSMSPHTVAQDVGTTARGMTGEGYRGHIFWDEVFVMPLLNMRFPEISKSLLMYRWR RLDAARQLARESGFKGAQFPWQSGSDGREETPVELWNHRSNRWMPDNSRRQYHVGLAVAY NAWQHYRVTADTKWLAEHGGELIIEIVRLFASMTEYDAAEDRYHIRRVMGPDEYHDGYPG TPGSGVDDNAYTNVMVAWLARHAVRIFEVLSSHEADELEFRLNIDPEEVTLWERMAARLY VPFAPDGRISQFAGYEDLKDLDFDAYRRKYGNIGRMDLILESEDDSTNNYRLSKQSDVNM LFYLLGPTGVVKELRRMGYGMSEEEVERTIDYYVAHSTNGSSLSRVANAAVLAMIGREDA WNEWQEALRIDIDDTQWGSTAEGIHLGAMAGTVDVILRAFAGVLIRFNRIEFYPNLPANV ADARFRVLFQGQIIEVYVTHTELTLVSRSRETHSVSVYINGESHTLEGGARLTFQL >gi|294971895|gb|ADNU01000023.1| GENE 31 31639 - 32853 992 404 aa, chain + ## HITS:1 COG:FN0590 KEGG:ns NR:ns ## COG: FN0590 COG1473 # Protein_GI_number: 19703925 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 9 403 3 393 393 240 36.0 3e-63 MTANEGVLKKVVEVAEQLAPRLRDIRTRIHQNPELGLTLPATQKTVLDALHGLDLEVTTG TNLDSVVAVLRGDKRGENPQAVLLRGDMDALPVTEATGFEFVSTNGNMHACGHDLHVTGL IGAAHILHACKSELAGDVVFMFQPGEEGYDGAGKMVDEGVLEAAGVPVVAAFGVHVSADQ PPGHVYSKPGSYMASANNLEITVRGRGGHAARPEAALDPVQVGATIVGQLQEFVSRHFFA WDPVVLTVGQFQAGTAPNVIPDSAYLAASVRTFSEETTSECERVLPALVEGIAQAHGLTA EVNMYRLLPATINNNDENALFLETAEALFGTERVHLMDHPRVGSEDFSRILDLVPGSYGH FGAAYGPEDTWEANHSPRARHTDTALGDQAAFLSALALNRLNKD >gi|294971895|gb|ADNU01000023.1| GENE 32 32855 - 34267 383 470 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022317|ref|YP_528144.1| ribosomal protein S15 [Saccharophagus degradans 2-40] # 4 423 10 454 500 152 32 1e-35 MQPLYTSQQVRDAEAPLLAAGQGKELMLKAATGLAHVVVRELQSRYGRVYGTRAVALVGS GNNGGDALYALAFLARRGVSCQAVTVAGSAHEEGLAAAVAAGVCVTTEWDSVRDADVVID GILGTGASGALREPLASQLSDWQNNACDQLCIAVDTPTGVNASTGEVDPHAVRATHTVTF GMLKAGLFVHPGAGFCGHVECVDIGLTSTDAPAGYLHTTASVRGPGEQDHKYSRGVLGVA AGSQQYPGAAVLTSLSAQNTGVGMVRYVGDAAGLVMHSVPEVVTGWGRVQAWVVGPGAPE DELVDEVLDQAYEKCLPAVIDAGALARVSRARDNWVLTPHAGEAQSLCESRGWTVTREEI ESAPAHWARRLASELGCCVLIKGARTVISEPDGTLHLTPVGPARLATAGSGDVLAGIMGA LMATEQPAGSRSAAVVAANAVLLHHEAAGNRALETAQSILEVARSHREES >gi|294971895|gb|ADNU01000023.1| GENE 33 34264 - 35418 849 384 aa, chain + ## HITS:1 COG:Cgl0572 KEGG:ns NR:ns ## COG: Cgl0572 COG0787 # Protein_GI_number: 19551822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Corynebacterium glutamicum # 6 378 4 358 361 230 36.0 4e-60 MTSAPLTAVIDTRALVHNVQLLQERAAGKQLVAIVKADAYGHGVNLVVPALARAGVTHFG TATIPEAVAVQDILAGLSDHGDDCGESDHTVMCWLYEPNADLSEPVERGIELGVGSPAAL ESIFNAAHTTGKTARIHLKVDTGLGRNGLNSTQLQQVLEQLTTAHGVQVCGVMSHFACAD EPDNDFNTTQIERFNQAVDTVKATLQIDNLMEHIANSPAILSMDPVPGNAVRAGVAMYGL SPFAPVDHAYSEGLQPAMTLVSHVCAAKDVPAGQGASYGLRYTTSASSKFALVAGGYGDG IPRQASHKAHVAIQGKAFPVVGSIAMDQMIADVGDAQVSPGDPVVIWGNGGPHVDEWAQW AGTINYDIVTRLGARVPRVEQEHT >gi|294971895|gb|ADNU01000023.1| GENE 34 35415 - 35900 438 161 aa, chain + ## HITS:1 COG:Cgl0573 KEGG:ns NR:ns ## COG: Cgl0573 COG0802 # Protein_GI_number: 19551823 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Corynebacterium glutamicum # 3 149 12 162 165 115 49.0 2e-26 MIRTSSVEQTAVFARVLAAHVQAGDVILLTGNLGAGKTTLTQMIGKELNVRGRITSPTFV IAREHEAVSDGPGLVHVDAYRLEDAMELDDLDLDAELDDMVTIIEWGRGKAEQLSDSYLD IFIDRPEPDPESEARTYTLSAHGPRWEGRIEQLTTACQEAL >gi|294971895|gb|ADNU01000023.1| GENE 35 35897 - 36538 182 213 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227411248|ref|ZP_03894449.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Eggerthella lenta DSM 2243] # 55 212 81 243 891 74 33 2e-12 MITLAIDTSAAASVALVDSNGEVRAQRTTFSARKHAEFVGPAIREITQDVQPQRVIVGVG PGPFTGLRAGIATGIGYALGLGIPIYGVRSHDALAFRAAVHGITGDITVATDARRKEVYA TTYRLGDTVTVIDGPRVILPADLTPAATRIGRGFVLYAETLGNPARTEDEFTEPTAGDLG LCAQNQPGNLEELGALLDTSPLYLREPDAKPRQ >gi|294971895|gb|ADNU01000023.1| GENE 36 36535 - 36951 195 138 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227407732|ref|ZP_03890964.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Geodermatophilus obscurus DSM 43160] # 5 135 8 144 150 79 38 7e-14 MIERMRWMDIAPVTVLDEKSFGNQAWTEEFFWSQMAVPGNRFWVARDGSQVVGYVGLSIS GPQGDILTLASDRRGVGSRLLDVAMDAAREAGVEALYLDVRDDNERAIYLYASRGFEEIN RRAGYYAGADALIMRSSL >gi|294971895|gb|ADNU01000023.1| GENE 37 36954 - 37424 483 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395169|ref|ZP_06805377.1| ## NR: gi|295395169|ref|ZP_06805377.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 156 1 156 156 271 100.0 1e-71 MDIEATLTEWEDGCDLVISAVAPVDRATVWSYVTDPDSASQWFAPWSRDDDVVTFDFDGE QLTGEIMGSEDERFFLLELPFGRVGLSVGEQTPDSTRLTVTHTFATCEEAAHTVPEIGPV WDTHLRALLTELGVKNVDIDEDSQARMYANLTVEDQ >gi|294971895|gb|ADNU01000023.1| GENE 38 37421 - 38485 705 354 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 350 515 849 860 276 46 5e-73 MTEPLVLGIESSCDETGVGIVRGHTLLTNTVASSMDEHVRYGGVVPEVASRAHINAIGPT VQAALDDAGVTLNDLDGIAVTAGPGLSGALMVGVSAAKGLAAATGLPLYGLNHLAAHVAV DMVAPDSPGLTLPTVALLVSGGHTEILTITDIVDGVKLVGATIDDAAGEAFDKTARLLGL DYPGGPNISRAAAGAFTDGVAGDPHAVAFPRGLTSAKDMRDPERRYSFSFSGLKTAALRY VTQTPDANVADVAASFEEAIVDVLVKKALLACEDLNIPHLLVGGGVAANRRLRARLEHDC AQAGVTLRIPPFALCTDNGAMVAALGAEIMSRGLAPSDFSFGVTSSLEVDHVYV >gi|294971895|gb|ADNU01000023.1| GENE 39 38478 - 38951 407 157 aa, chain + ## HITS:1 COG:MT0426 KEGG:ns NR:ns ## COG: MT0426 COG0494 # Protein_GI_number: 15839799 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 8 155 13 167 217 118 45.0 4e-27 MSDPQVSRASGDGWCKTPQGRFWGLFGAAGLLIHDSERGVLLQHRVSWSAHGGTWGIPGG AKHKGESDTDAAIRESHEEAGVPALDGHDIEILDLYTVDKSGWTYTTVICRALGRLEESI SDRESEELAWVPVDQVEDYPLHPEFAKAWPTLRKSLG >gi|294971895|gb|ADNU01000023.1| GENE 40 38926 - 39114 162 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFRNLISLQWPAHFRVLCRVTRRFWPENVNKTNKRGVYSTLWIEGCRVNRSRAEVTPGTY AG >gi|294971895|gb|ADNU01000023.1| GENE 41 39107 - 40042 504 311 aa, chain - ## HITS:1 COG:no KEGG:Mjls_0086 NR:ns ## KEGG: Mjls_0086 # Name: not_defined # Def: hypothetical protein # Organism: Mycobacterium_JLS # Pathway: not_defined # 152 306 122 271 278 82 35.0 2e-14 MSSGAYIQRMDSQRTLHIPMSLQEARTRGLRPSQLTPVFLKGHKLRGTFTSDAHVRTVRI PLWAHEDPHWWTLFTELSAVTATRPHAMVTGNSAAYLRGLPIKLRPELDIAVPNEHGPIA VPHVKSFRMADTASVTKEGLRFHHLGGILHVIARQESVENLVAVLDALMGPWRRPAELTR TKLDQLVAAGPKVHGWSKLKQAGALARENVASPQETRLRLALVRAGLPEPVVAYPVWIER FGAHIHPDLAYPFAKIAIEYEGRHHFELTEQVLKDTDRYYELGRLGWTVIRVTALHEMDS IVLKVRECLNV >gi|294971895|gb|ADNU01000023.1| GENE 42 40329 - 41477 1093 382 aa, chain - ## HITS:1 COG:Rv0433 KEGG:ns NR:ns ## COG: Rv0433 COG2170 # Protein_GI_number: 15607574 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis H37Rv # 2 368 10 374 376 386 51.0 1e-107 MVDFAQSPRSTLGVEWELALVDKTNLDLVPRAGEVLNLVGKAGLDSCIVGEMLTNTVEVV TGVHEQVSGAVADLKSSVAQLREITNPLGLDLMSAGTHPFAHWREQQVTDKERYAELINR TQWWGHHMLIYGVHTHVGIDKREYVLPIMNALMCYVPHLQAVSASSPFWEDTDTSYASNR AMLFQQLPTAGLPYPFTEWREYEKYVHDMQKTGVIEQINEIRWDIRPAPKWGTIEVRVCD GMPTIAEVAAVTAFVQCLVHHFCDRLDRGLSLPTMPQWFHVENKWRAARYGMDAIIIENE LGRERLVKHVIADEVEFLTPIARELGCEDELLGMLEFARIGASYQRQRAVYENTGDMFQV AKLLVDEFKSTRPSQVIAPGAE >gi|294971895|gb|ADNU01000023.1| GENE 43 41520 - 42380 488 286 aa, chain - ## HITS:1 COG:PA1292 KEGG:ns NR:ns ## COG: PA1292 COG2897 # Protein_GI_number: 15596489 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Pseudomonas aeruginosa # 2 283 3 284 284 178 41.0 1e-44 MTQHVISVDQLHPLVGKPRVRILDVRWTLGKPNGYPDYLESHIPGATYVSLDEQLSSHRP DEPHLGRHPLPSVEEFQRTLQCLSIDEKTTVVIYDDAASTAAARAWWLLLWAGLTDVHVL DGGLTAWKDAGYELEHGPDTNERVPSSYSVTPSLPTTDAAGAADLARTGTLIDSRAAERY RGDHEPMDPKAGHIPGAINRPTTLNTPNGRWLSEDELRKAWNDLGVLDETGKPTAEVGVY CGSGVTACHNALSLMQVGVTPVLYGPSWSGWSSDDSNPVATGDHAS >gi|294971895|gb|ADNU01000023.1| GENE 44 42435 - 44045 1422 536 aa, chain + ## HITS:1 COG:CAC0182 KEGG:ns NR:ns ## COG: CAC0182 COG1472 # Protein_GI_number: 15893475 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Clostridium acetobutylicum # 140 389 75 334 520 164 37.0 4e-40 MRRLITAGICALLLAGCGGTQGTSTQTSGPAQETEKSDTASNAPETPQAQGPAPVEGISD EDTSEAKKIVEKMSDEELAGSVLMMTYQGTDPQVAADTIERLHLSGSIVMTYNLGETATL KDLKATTSAIKAGGKDRDWPVLTSVDQEGGPVARVRSATMPFPPLMAGGAVRNKDTVTNA THAQGAELRDAGFSIDFAPVADVTVGAKDPAINVRSAGDKSDAVSDTVAAAVSGYSKAGI GSAAKHFPGHGSLTVDSHESLPVSKKSLKKLSKTEYEPFKKAAEVGVPLIMVGHIAVPGN EKLPGDLNPEVYEALRKDVGFEHVAVTDALNMGAVTQKDSALTAIKAGADLALMPHDTEQ AHASIVKAVKSGDLPRKRITEAATRVVSLSLWQKRSAEIAQGSAPKTEDALRAYAEESLS VISGTCQVAKPLKKARVVGDDEVAVQRLSKAFENNGVSVGSGPTVSVGQKPADGAKYVVG IGAPWNVDRAKADTVIATYSGNEYAMDAAAKYLTGTLEAKAQVPVKVRAKSPQCGK >gi|294971895|gb|ADNU01000023.1| GENE 45 44097 - 45311 912 404 aa, chain - ## HITS:1 COG:Cgl1200 KEGG:ns NR:ns ## COG: Cgl1200 COG0500 # Protein_GI_number: 19552450 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 52 401 51 383 387 94 27.0 5e-19 MDPSTLKQLLDVSALKILDSLDYDRSRELQLNKQLRAQGLSPELTAAILTQAQLRIEAED KFGPFASHMLFTRDGLAQATRIPVAAHHAARMRQAGVTSIADLGCGVGADALAFAGTDVQ VRAVEIDEVTSAIAAFNMREFPTAEVVHGAAEDQDLAGFDALWCDPARRSGSHRDGQARR LSDPESFSPSLSWVVEKAAEVRAAGVKMGPALDHGLVPDGWEAQWVSHNGDVVEVGLYAG DACQRAGRSALLMGDEPGTLTVHESEVPEEDEPGIGELGEYLFEPNGALVRAGLVTALCD PLGVRRISPKIAYLTGDGLVTGIAQRAVSQYRIVDVLPAGIKALRQALKARNIGKVIIKK RGMDIVPEKVRRQLKLTQGSESATLVFTRVGEKHVVLFTQPVTL >gi|294971895|gb|ADNU01000023.1| GENE 46 45345 - 46205 582 286 aa, chain + ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 2 275 7 284 293 281 55.0 1e-75 MSTLLTARTVREFAHELGLRPTKTRGQNFVIDPNTVRMIVEEAQLTTGEQVVEIGPGLGS LTLGLLEAGHPVTAVEIDRLLASRLPRTIDEHAPDAHPLTLINDDALHVTELPTTPTALV ANLPYNVAVPVLMHFLETFPSLNSVLVMVQAEVANRLAATPGSRVYGAPSVKAKWYGAVT RGSDIGKNVFWPAPNVGSGLVRIVKHAQPYGDEELRTATFDVVNAAFAQRRKTLRQALAG LLGSGADSEQVLVDSGIDPKTRGEALDIDAFITIARTWLAGRKGSQ >gi|294971895|gb|ADNU01000023.1| GENE 47 46202 - 47179 670 325 aa, chain + ## HITS:1 COG:MT1040 KEGG:ns NR:ns ## COG: MT1040 COG1947 # Protein_GI_number: 15840439 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 4 324 6 301 306 209 43.0 8e-54 MTEVTARAPGKINVFLHVGDRMDDGYHELVTVFQALNMFEEVTLRTCFNRTDTVVRNVSG NDKYPGRSPVHAVTLKGRFGSTAIPLDHSNLAVSAINRLAVRTGVHVPVAVEIEKNVPVA GGMGGGSADAAAALVAYAKLTDLDDPDLLRTVGAELGADVPFALRGGCAVGTGRGDELSP ILSSGEFTWVLATSVDELSTPVVYQTLDDLRDAGEAPPAGDVQEQLALVLQAVGSGDAHA LAQVVHNDMEPAAFGLLPAVAEVVTTGRQAGALAALMSGSGPTVGFLVEDATHALDLTVL LEASESVKHVVRVTGPACGAHIVTQ >gi|294971895|gb|ADNU01000023.1| GENE 48 47207 - 48016 555 269 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395179|ref|ZP_06805387.1| ## NR: gi|295395179|ref|ZP_06805387.1| peptidase M48 [Brevibacterium mcbrellneri ATCC 49030] peptidase M48 [Brevibacterium mcbrellneri ATCC 49030] # 1 269 1 269 269 465 100.0 1e-129 MLASAITCAVLACVTGVLIPVLARTRFQLRFPSLTLYVQLGSAVLGVWFLFVAAISFALH MLPALTDTIPLASLWAYGLATLLTVAAVSFWIMATAPVTKDVREVITALNTHVVSQEERP GFTLATVKHTYPAALSTPPADGRPGTIMVTTGLRDALTPGQLQAVLAHEYAHVTKRHGKI LSILTTLDQMLHVFAPLKRSATLLVELAADDIAAKQAGPAELANALAVMAQATGDETMFL RAERLTTKKWPREHWRTIPEPIRVDKLRT >gi|294971895|gb|ADNU01000023.1| GENE 49 48022 - 48336 305 104 aa, chain - ## HITS:1 COG:no KEGG:CMM_2199 NR:ns ## KEGG: CMM_2199 # Name: not_defined # Def: putative transcriptional regulator # Organism: C.michiganensis # Pathway: not_defined # 1 102 17 117 123 65 42.0 9e-10 MNFLWDSPVPLGARDIQRLFADHTPAYSTVMTTLTRLEKKGHVKRGGPSPRKTKFEAVRT NEEQTVDDMVSVLDQANDREAALLAFAGNLDSRDLELLRSAFTK >gi|294971895|gb|ADNU01000023.1| GENE 50 48432 - 50510 1827 692 aa, chain - ## HITS:1 COG:Cgl2282 KEGG:ns NR:ns ## COG: Cgl2282 COG1292 # Protein_GI_number: 19553532 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Corynebacterium glutamicum # 57 673 17 630 630 587 48.0 1e-167 MSNDHSKRNSSHDETAPSGEPEIDIRMGPKLQEQQEKAARKKKVRQERTKKAKRFIEEIE YPHGIHPALVPGVSIEDQLIRYRVDKGILVIVGLLIIGFVTWGILAPEQVLEVSTTALQW VMSNLGWVFNGLAVVLVIFLLCIAFSRYGRIPLGLDGEKPEFSTGSWAAMLFAAGIGIAI IFFGPYEPLQYFLSPRPGAYDPATVEAIKGAMAQAALHWGVNAWAIYAIVGLTVAYMSFR RGRLPLMSSVLEPLFGKKSDSLGGRIIDSLAIVATLFGTASSLGLGSLQIARGAQIVTGW NTTGNTVAIVIIMVLTIGTILSAVSGVTKGIRRLSNINMVMAVGLAFFFFVAGPTVFLMN IIPGVIMEYFATAPEALSATMADSPEMQEFLSAWTTFYWAWWVSWSPFVGVFTAKISRGR TIRQFVLGVLFIPSSIIVLAFTILGGTAIYLQHTQQAVATDGTIETLPAPENIFFTVLDY LPGAALIAPIVMVMLAIFFITTADSASLVNAQLTQGGNPKPNRLITAFWALCMAGIAVVM LLVGGPSALTGLQNFITVTALPFTFVIVLMCVGLVKDLRSDPQTLRVNYTQQALKSMVRR GIEKHGDDFAISIEPTSSTSKYAAGATFDSRAEDLTAWYQRTDEDGNPVNYDYATGEYLD ENGDPIEVDALDDSDTSKNSKGTDKEAGEETP >gi|294971895|gb|ADNU01000023.1| GENE 51 50661 - 51008 148 115 aa, chain + ## HITS:1 COG:BS_yczG KEGG:ns NR:ns ## COG: BS_yczG COG0640 # Protein_GI_number: 16077456 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 9 106 6 103 104 80 41.0 7e-16 MTPPRTYTHPDADDLVLARVLYALSDPVRLEMVRRLASVEEADSLDLADDLPRSTLTYHT RILRENGVTFTRSQGRSCLISLRFDDVERRFPGLLKSLIVSLEEERAGQGGVDRA >gi|294971895|gb|ADNU01000023.1| GENE 52 51005 - 52144 698 379 aa, chain + ## HITS:1 COG:BS_ydhL KEGG:ns NR:ns ## COG: BS_ydhL COG2814 # Protein_GI_number: 16077647 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Bacillus subtilis # 6 373 43 415 425 122 28.0 2e-27 MITKLWPYVLGSVVLGLDAYVIAGLLPTIATDLDATAGMVGIGVAGFTAAYAVVGPILAG AAGRSASRSLFLALVVFVIGNVGSAIAVSVGLFIISRVVAGAAAGIFSPLSSSVAAASVP AERRGRALSLVLAGLACGTVFGVPVGLLVAHAMSWRWTFGLIAAVGLIATIGISMRGKSG IADVAAPSLRARLVTLTRGPNVVTMLVTLLTGVSSLGLYTYFLPLLDGLGLSHHKMWLIW VWGIGGAVGALLVGRVVDAVPRPLMVTVFITALLAVTFALLGCNVSIVVTVTCVFAWGVL GWSSLAPQQHTLITANPADGTTAVAANASANYLGSALGAAGGAVFIDTGVAGAGLAHFAV VPAVIACILQLFRTRMARA >gi|294971895|gb|ADNU01000023.1| GENE 53 52236 - 54032 1679 598 aa, chain + ## HITS:1 COG:MT1707 KEGG:ns NR:ns ## COG: MT1707 COG0488 # Protein_GI_number: 15841123 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 2 598 3 591 591 627 55.0 1e-179 MHLLGAESISLSYPNRVVLDDVTVGVSAGDRIGIVGRNGDGKSTLIRILSSDLPPDSGRV TSRGGTRIGYLRQSDVLGESATVRHAVVGDVPDHEWASDAEKRDVIHGLLGDLPLDTPTH SLSGGQRRRVALAALLAQPWDVLILDEPTNHLDMTGVRWLAEHVKKRWPAGQGAFLTVTH DRWFLDEVTTRTWEVHDATVDAYDGGYAAYVLQRVERDRQAQAEEAKRQNLMRKELAWLR RGAPARTSKPKFRIDAANALIAGEPPVRDTVELVSMATSRLGKDVFEMVGASAAFATDDN PEVVRTVIEPTDWIVGPGDRIGILGANGAGKSTLVGLLTGRVEPASGRVKRGKTVRVALL DQQLRELDDVQDDFVREIVGRKREVQTVQGELTPSQLLEKLGLGGVLKSRVKDLSGGQKR RLQLFIVLMDEPNVLILDEPTNDMDTDMLAAVEDLLDQWPGTLIVISHDRYFTERVTDYQ YAVLGGHVRHLPGGVDEYLRLQQEPDASLPRKASAGAEEAPEVSLSGAKLHAARKEIASI ERRVEKISGQIEKVHERMAAYDQSDFEGLQKFTGEIDALRQETDDLEARWLELLEEIE >gi|294971895|gb|ADNU01000023.1| GENE 54 54296 - 54490 142 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLGRHVLQGLPERCSGLSELTITYRLIPDSDQRSRDETALRNVLHTRPTSSSLIEKIAP PLYH >gi|294971895|gb|ADNU01000023.1| GENE 55 54573 - 55091 -326 172 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRTGAVELLLSQCPLNGGLCRGLLRRCWFAPRLLVHFLLIHRQQQITPRWIGQPSSVGSL RIPPRSMRPSRRSRSEEVPGLWVEHITWSFILCGSPPLVRQTEDRVRYPTLAGVRDSGAR HFWVVSPIFATSCAASALGPSSQTGETRTPPGSLEAVMAVILPAWAPTVDGT >gi|294971895|gb|ADNU01000023.1| GENE 56 55456 - 56217 290 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 227 2 224 245 116 32 7e-25 MYATTATAAVQARSVNLSAGNTRILRDCSVTIPQRGLTSIVGPSGAGKTSLLYCLSGLDQ PDTGQILVGQTDIYSLRSEARAKFLRENVGFIFQQYNLIPYLTVEENITLPSTMAHRKMD HGFLTHTMETFGLLEKRKTRASLLSGGEQQRVALCRSIVLSPAVIFADEPTGALDSRNSA LVLQSLGDLASQGATIVMVTHDVDAAALADRVVFMHDGTVTNISSNQISPNEISSVLRGE WGSTTEQRGSAKP >gi|294971895|gb|ADNU01000023.1| GENE 57 56394 - 57635 655 413 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_496 NR:ns ## KEGG: BBMN68_496 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 411 61 472 474 280 44.0 1e-73 MVSVTIYILIAVVAVFTLTVIGAATVDRTRQTFSQWRLAGASPRQVRGGLWLLLGLSSVI GAVPGAVLGAFLSTEAVPLFNEMAAESFPDGTGNFSAPPFSPSAVATILSFLIGVVTCVA GAVVPARRASKVKPVEAIRGVAAVTGRHRVLRWIVGLIMLLIAVFLAFSSSLMPQNTDIG VEAGNMVNSAIMAGLVAAFGALLLGSEIISIVLGSIRMLLRPIPGTAIAQVAVKQANARA TFNANMIAPLGAAVGLSVVMFTTLRSYQRTMAAEGFALTNPNYTDTALMTGLFCLAALLT SIAVICLSGRDSVLEQGALRTAGLTPHQVLALLVWQTFQLTVSTIIIALIPVLTTSAVLV ARSTLIAGTSMLSIPLLHFIAAAFVCWLALFLVQWVQLAPWLCRSPAVSLRRA >gi|294971895|gb|ADNU01000023.1| GENE 58 57921 - 59303 300 460 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_495 NR:ns ## KEGG: BBMN68_495 # Name: not_defined # Def: histidine kinase, dimerization and phosphoacceptor region # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 72 450 37 397 409 204 34.0 5e-51 MCDQTNYEGAPQVPYEQRQNPVKETTARYWQVLGEWLSQSAVPPGRPSAGLIAGVIICSS YQTFFIARLLFVGTPADGTAFHLSGVWYGAIVLAVAVIGSAAVLIASSRAPLTVLGVECV LHVVGSALGMANYFVFPLLFALFSCITRSLAWIAATGILTVLVAMAASSLIVARPGTFGA ELVGQLITAAAFAAVGIATRSVRAWRSSSRRVRTAQAQAQHYEYERDEAIVRARIAEELH DSVGHGLTTIAALAEGLSGVTGDARFDEVLDGINQVARESLEDTRRAVHRLSAATHVSEC LDVAHIETGAIVDAGNGESRFRYRHWDDIVPILDHVRSLGVTVIFTETGRRQEHLEHSHL CFSITRESLTNAIRHTTCLERVTVSWDHSEKATRITVRNDGVERSLPSRVGSQHAPGTGV RRLRRQVEQTGGSLSSGYEDDADWVLVADVLVPDKEVGHP >gi|294971895|gb|ADNU01000023.1| GENE 59 59315 - 60004 450 229 aa, chain + ## HITS:1 COG:CAC0174 KEGG:ns NR:ns ## COG: CAC0174 COG2197 # Protein_GI_number: 15893467 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 9 220 2 205 213 159 39.0 4e-39 MTAMHHRTLKVMIVDDQRLARTGFSLMLAKTGAVNVIAEASDGQQAIQVLDSRYRSRDPL PNVILMDVRMPVMDGIEATRRITIDYPSVKVLVLTTFDEDDYAFGALAAGASGFLLKDVR ATQLATALQAVAQGDAILTPRITRQVLERGIVRASSAGEKRARQAQFAQLSPREFDIARL IADGLSNAEIAQKLVLQPASIRRNVSRILAKLELRDRVQIAVEWYKSGM >gi|294971895|gb|ADNU01000023.1| GENE 60 60981 - 62951 1068 656 aa, chain + ## HITS:1 COG:SP1344 KEGG:ns NR:ns ## COG: SP1344 COG0515 # Protein_GI_number: 15901198 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pneumoniae TIGR4 # 12 434 9 424 869 196 29.0 1e-49 MPIDLRYVPYCHPEFAFYTPIDNAPSARLDSNVVIPSSWEIINGQPWTHAKPRNVDLPRQ GWKVHVSATLANREHVLETVATFCVDREISFKYLSTHADYLALNGKYTNRGSAGKFVTIY PCDIDQFEDTLLGLEDCIGAEEGPYILSDRKWGSGPVFYRYGAFLPPEQPTQFESTLIDP QGNVVEDVRRPIFTLPSWVEEPAFVKERKQNAAIDAQFPFDMKTALHFSAGGGVYVAEAN SSEYVPEGTRVVLKEARPFAALDTEGKDAVARLRHEHRVLCELAHTSYVPRTYALFKAWD NLYLVMDYVDGSSLKRETMLRTPVLKPAPWKLEDAAFNTWLTGVVQETDKAVQAFHEAGW LLGDIHPKNIVLEGGTRPVFIDFEFAHPVDPDWRIGQVAPGYGPRKGLSGSDADLWSLGI TQLDMVLPQATTADQGNEGLLYRLLDEADQELSLPASVSHSISQKLPTDDDGGEQQTLQA APLDTVLNLLVSGVERHIRFTDDSPALPGDIELFGRGGVEAALSYPYGIAGALAVTAKAG RPLDQRYVELSVPWIEKNLSHVSTPGFRGRDGLDYGLRQAGMRELALEVSSLSVADPVDP TYWSGWAGLGLNALSSNETDKALRASAGLRRMLRDGLHHGVSRSPVWMVRRGYFLV >gi|294971895|gb|ADNU01000023.1| GENE 61 62884 - 63513 281 209 aa, chain + ## HITS:1 COG:SP1344 KEGG:ns NR:ns ## COG: SP1344 COG0515 # Protein_GI_number: 15901198 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pneumoniae TIGR4 # 8 185 685 858 869 62 29.0 7e-10 MGYTTESAGLLYGWSGAAIFWSELYKRSDQEGELVDLAKEAIDRELRRCSLTQNGTVEYD EGWRTLPYLGTGSCGIALAIHELRAATGTDLYEDEYRKLIRACTYYQCAQGTYGYGLAGF ATVLNRAKASLSPDAAMALKKAPDTLRLFLVPRDGSAFVRGNQGLKLSCDFLTGSLGVVA ALSALRGDWSGVPFLPGGGNDANEREEVY >gi|294971895|gb|ADNU01000023.1| GENE 62 63516 - 63650 75 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395192|ref|ZP_06805400.1| ## NR: gi|295395192|ref|ZP_06805400.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 44 1 44 44 83 100.0 6e-15 MMEQILNFQTMSTDGEREDFARVSTLSFNGPCPGLPSAFTYSNC >gi|294971895|gb|ADNU01000023.1| GENE 63 63783 - 65624 482 613 aa, chain + ## HITS:1 COG:PA1304 KEGG:ns NR:ns ## COG: PA1304 COG1770 # Protein_GI_number: 15596501 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Pseudomonas aeruginosa # 378 581 450 653 683 98 32.0 4e-20 MSRIEIPSFCVDARELQPVLSPLVEELKAFEITSQSVRPDDRGDAASKKPKVSPAVVGGR LLLRIADEGSTREIVLPDVSVHRITGLVVSTENTLVAAVQQAVNGDDFELYIFDISGESA KTLTQSSSSGRVVTQLGSNIAWLERNTARHPVRLVMCDEQGHRSTLIEMTEPDRWLSLQA VDPELLVVAGHGPDGTEHFVIDIRSRETVKRFHCRLDPDDCITACDGSVWTIDSTRRLLL RWAMDGTQWTDASTPLPPGFLPTDLNSRGGVLWAAGRVDGRAAVWIPQLGSDSVWTAPPS GIIRLIEVRDGCPEFIVSSPIHPPELAKGSDGGAWRRPLAGLPGVSALEVRDIPGRPAAV GATLFFQQIRARELHSCPVLALVYGAYGLPNEGAFDPQLAALLTSGVTVAFCHVRGGGEY GPSWHKAGKGEKKQNSLDDFVAILEHLRSQGLCEPTRIGASASSAGALVAASAAVEHPDL IAAVYLNHPFLAPEVLSHCPGGVSAPIDWDEFGDSTIIGHPVLSALMKAEEAVHRSGRPK VWITAGVSDRKAPLSSVIEWAEAYSDIAGDMDVILDLKDGGHTAPRDQTRSWLPIAWVRQ QLTAPVPTEGAPR >gi|294971895|gb|ADNU01000023.1| GENE 64 65942 - 67321 214 459 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 234 433 4 200 311 87 28 4e-16 MDAVSRFRRGDFVSRLVNDTTAAQEFVAHGYIGVILGATTLLGAVIFIYLISPILLVTIV CVFLVAGVGAFLVLSQLECVATRRQQALALLTADLEGTLQSLRTVKVTNAETHEREHLNS SIESVFTAAKRQAALGAIITPAAQLAATGSLIAGVVIGGAQVASGHLSLAGLVSVLLYST SMVLPLANLMKGYSAVMTARASLTRLEEVQSLPSERARRDDIRPHVVAKTTSPAIEFDDV SFRYSPDAPAISSLDLSIPRGSRCLLIGPSGVGKSTILNLISGLYVPSAGSVRVFGEQMS AHTVSALRDHMALLEQSAPVMYGSVRDAVAYTTPAVSDDQVLGVLHTVGLREKFPDAQSL DTRINDSGENLSGGERQRVALARALLRRPDLLLLDEPTSSLDAETYAMVMDALYQLPEDI TVVMVSHDARQREWADYTIELEFGGGVNVSSTADQRTAG >gi|294971895|gb|ADNU01000023.1| GENE 65 67960 - 68982 662 340 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395195|ref|ZP_06805403.1| ## NR: gi|295395195|ref|ZP_06805403.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 340 1 340 340 652 100.0 0 MEDFTTAQIVIGGLLLFAQLLAGIVELATVGTIRPPEDKTFTYIRLAANQYQTVALPALG ALISGSLVSISASVFYEVLSGATLFRHLVAGIAAFLAAEAALVVILRLVMNRVGDPSELV DNPFAIRAAAKEYSDDPRQGCLNPDFLTERLDEWESSMPRHSLNIAKEVDASRVTKSLDT AADVNGMWRWIGTSLAVYKSALIKFPMRFGWPLLGAFFFLTGSSWYGLVYANVEIKHWWY LIIVMVIDLAIAVMPTLIYCVARGNRARLWHRINRKAVKDARTALACAQNSKASIEEEDA VLRRVLERSDTFLAHHQYASKTSGSIILQLGRLQITINPK >gi|294971895|gb|ADNU01000023.1| GENE 66 69015 - 69821 295 268 aa, chain - ## HITS:1 COG:Cgl0107 KEGG:ns NR:ns ## COG: Cgl0107 COG1349 # Protein_GI_number: 19551357 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 1 203 1 250 260 121 35.0 1e-27 MQRSNRQKLIIETVNSGPRSIDALAEMTGASSVSIRRDRVELADQGAIRRIRGCAAPMPH RGADYAFALQQASDIDLKQALAMATAELIEPGESVFIDNGTTALAIAKELSGKGQSGMAA SLHSASTLARKPGNQVVVPGGLIDHDDQAFASAQRVLLASTADKFNHTAALRSAFIADLG TIITTQSTPGVTAEAHIAGVTVIEAEESSVNGKRPRVPLYSIGPSHWRGLRPRRVHENRL NYLDSDRVLAISQSRHPTGELSKRRHRI >gi|294971895|gb|ADNU01000023.1| GENE 67 69857 - 69997 63 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVSEATERGTPHPGGHRVDRGREDRPATDEEDSDTGDATRPCPEF >gi|294971895|gb|ADNU01000023.1| GENE 68 70018 - 70125 133 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTLLIDYAQVLAKLFLDTAKAELAHRADMPVSVF >gi|294971895|gb|ADNU01000023.1| GENE 69 70192 - 70827 591 211 aa, chain + ## HITS:1 COG:MT1707 KEGG:ns NR:ns ## COG: MT1707 COG0488 # Protein_GI_number: 15841123 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 4 211 389 591 591 193 52.0 2e-49 MQGELTPSQLLEKLGLGGVLKSRVKDLSGGQKRRLQLFIVLMDEPNVLILDEPTNDMDTD MLAAMEDLLDQWPGTLIVISHDRYFTERVTDYQYAVLGGHIRHLPGGVDEYFALQQREGA APRHAQKQEAPTEDASGLSPAEHRRITKEVQAVTRKLERIDSEVARLDSTIAEHDQSDFE GLAELSASRNELLEEKDELELQWLELSEQLE >gi|294971895|gb|ADNU01000023.1| GENE 70 70882 - 71391 367 169 aa, chain - ## HITS:1 COG:no KEGG:REQ_22090 NR:ns ## KEGG: REQ_22090 # Name: not_defined # Def: MarR family transcriptional regulator # Organism: R.equi # Pathway: not_defined # 25 152 6 137 158 68 32.0 1e-10 MLPDSLNELFAITGSDDFPSPGINDDELAGLTHALVRQSTILRLVGARFAREIDLNQADF YVLMSVMTASDKDITVTPGYISEHLSLSASTLTSILERLAERELIVRDRDAADKRRIVLY YTEKAAHLAVDFYRRVGRALEPITESHRNEVSQMTDHLNLVAKTLCKSI >gi|294971895|gb|ADNU01000023.1| GENE 71 71434 - 71628 64 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVTGARNLRFTFSPKLLGTLKPSPRQGYQRGPRATLAQLANFTTVPIIADSLKRHTMFT CPLN >gi|294971895|gb|ADNU01000023.1| GENE 72 71594 - 72685 1269 363 aa, chain + ## HITS:1 COG:BS_yufN KEGG:ns NR:ns ## COG: BS_yufN COG1744 # Protein_GI_number: 16080206 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Bacillus subtilis # 20 351 11 334 350 136 31.0 6e-32 MKRKFLAPVTAISVITALAVSACGQAPEEGGGDKQASDFKSCIVSDAGGWDDRSFNESSK DGFDRAVNEFGLQKGEAESKDDSDYVQNVDNMVQQGCNLIYGVGFNLAGVLTDSAKQNKD VHYALIDSTFAEADGTPVEVENGKPLLFNTAEAAFLAGYLAAGTTETGKVATFGGMQIPS VSIFMDGFADGVKKYNEDNGKDVKLLGWDKEAQKGSFSGDFDNQSQGQALTEQFLSQGAD IVMPVAGPVGLGAAAAVAKDDKARLIWVDADGYEAIPDYKDRVLTSVVKQIANAVYDTTV ESKDDKFSSEPYVGTLENEGVGLAPYHDFESKIDDELKSKVENLKQDIIDGKIKVETPNA PTK >gi|294971895|gb|ADNU01000023.1| GENE 73 72759 - 74333 168 524 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 257 478 14 222 312 69 27 9e-11 MQLELQGITKRFGSFTANDSIDLTLKPGEIHALLGENGAGKSTLMNVLYGLYEPTEGSIF LDGKPVKFSGPGDAVAAGIGMVHQHFMLIPVFTVAESVALGYEPTKALGLLNLDEARSKV REISERFGFDIDPDAVIGDLSVGAQQRVEIIKALSRDAQVLILDEPTAVLTPQETDELIE IMRQLKEQGTSIVFITHKLREVRAVADAITVIRRGKVVGTASPESTESELAGLMVGRDVN LTTDKQDAQIGDVKFAIKDLTVLDKSGFPAVKDISFEVRAGEVLAIAGVQGNGQTELTET IIGLRTPAQGSISLGGNELVGTSVKHRLDAGIGYVPEDRSTDGMIKNFSIRENMILDWYN RPPYSQGLALKPQVIREEAAKKVEEFDIRLGTIDDPISTLSGGNQQKVVLSRELGRELKL LIASQPTRGLDVGSIEFVHKRIIAERDAGTPCIIVSTELDEVRNLADRVAVMYRGSIVGI VPADTPRDALGLMMAGASEEEAMARVADGSAVTEVSEAAQEDIV >gi|294971895|gb|ADNU01000023.1| GENE 74 74330 - 75538 1254 402 aa, chain + ## HITS:1 COG:TM0104 KEGG:ns NR:ns ## COG: TM0104 COG4603 # Protein_GI_number: 15642879 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Thermotoga maritima # 80 393 36 339 344 186 39.0 5e-47 MSAPVKEKKTEAQSTPQSPSVMRQIVTGTFGVSVLSIVLALVFGAFLIAFANPDVQRAAG YFFARPTDLLYYAWTSVSEAYVALFRGAIFDWQANSFTRMIRPITESLVLSTPLIFTGLG IALAFRSGLFNIGGQGQVILGAVTAGFVGYAINLPPVIHLLVALVAGTLAGAVWAGIAGV LKARTGANEVIVTIMLNSIAGFLLAYLLKQAWFRQTGSANPITTEIHSSAALFPLLPAPF RLHFGFLIAIAATVLVWWILERSTIGFEFRAVGSNPEASRTAGISVQRVTILVMALAGAL AGLGGAAHVLGTEMKITGGIAGQIGFDAITVALLGRSRPLGTFFAGLLFGALKSGGYLMQ AQTGTPIDIVLVVQSTIVLLIAAPPLVRAIFRLPAPVAKEAA >gi|294971895|gb|ADNU01000023.1| GENE 75 75562 - 76812 1432 416 aa, chain + ## HITS:1 COG:alr5368 KEGG:ns NR:ns ## COG: alr5368 COG1079 # Protein_GI_number: 17232860 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Nostoc sp. PCC 7120 # 115 416 8 307 312 219 41.0 6e-57 MPTALQPVEWKYPIVYGVLALLSLFVFGFGAPGDAQTTFAFTAPDAFISLPDLVVASKIT AIVVGVILLALAGFSLWATRARAEVGVWLPLAFGVLFVFAFLTWAGAGRGVIATTSLLAG GLALSVPLIFGAMCGLVGERSGIINIAIEGQLLAGAFLAAVVASVAKNPYAGLVAAPLAG AIVGAILVFFAVKYWVNQIIIGVVLNVLVVGLTNFLFSTLLTQNQELWNTRQALPALPIP LLSEIPVLGPVFFKQNILVYLMYVVVIVLHVAVFHSKWGLRMRAIGEHPRAADTVGIHVN RGRVLNTIFAGAIAGLGGAFFTIGSGLAFGKEMTAGQGYIALAAMILGKWNPFGALFAAV LFGFTKNLGNSLSAIGAPIPQDLLFMLPYIVTIFAVAGFVGQVRPPAAEGIPYSKQ >gi|294971895|gb|ADNU01000023.1| GENE 76 76824 - 77207 301 127 aa, chain + ## HITS:1 COG:ML2174 KEGG:ns NR:ns ## COG: ML2174 COG0295 # Protein_GI_number: 15828164 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Mycobacterium leprae # 1 122 4 125 134 167 60.0 4e-42 MDWDVLRERARAVMENAYVPYSKYPVGVAALVDDGRIIVGCNVENASYGLGLCAECGLVS ELHRTGGGRLVAFACVDKHGNKLVPCGRCRQLLYEHGGPDLLLDMPSGIASLSQVLPEAF GPDHLRS >gi|294971895|gb|ADNU01000023.1| GENE 77 77209 - 78489 1285 426 aa, chain + ## HITS:1 COG:MT3415 KEGG:ns NR:ns ## COG: MT3415 COG0213 # Protein_GI_number: 15842906 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Mycobacterium tuberculosis CDC1551 # 5 425 6 426 427 435 60.0 1e-122 MIEPFDAVDVIRTKRDRAELSDEQIAWVIDAYTRGVVADEQMSSLGMAIFLNGMSPREIA QWTHAMIESGERMDFSSLSKPTSDKHSTGGVGDKITLPLAPLVAVFDVAVPQLSGRGLGH TGGTLDKLESIPGWRANLSNDELMSQLEDIGPVICAAGTGLAPADKKLYALRDITGIVDC IPLIASSIMSKKIAEGTQALVLDVKAGSGAFMKDVEQATALARTMVELGKNAGVETSALI TDMSTPLGLTVGNALEVRESVEVLAGGGPADVVELTVELAREMLALVGKTEVDVEAALKD GRAMDMWNRMIERQGGDPYAILPTAKETHTVTAEESGVVTTLDALSVGVASWRLGAGRAR KEDPVQAGAGIELHAKPGDTVTAGQPLMTLHTDEPQRFERALESLEGAWSIGQQAAPRTV ILDRVS >gi|294971895|gb|ADNU01000023.1| GENE 78 78507 - 79220 820 237 aa, chain + ## HITS:1 COG:BH1352 KEGG:ns NR:ns ## COG: BH1352 COG0274 # Protein_GI_number: 15613915 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Bacillus halodurans # 7 234 5 217 224 157 45.0 2e-38 MITRTDVAQMIDHTLLKPESTPDDFAALVEAGKELGVKAVCVSPSALPVTDTGDLVVATV VGFPSGAVKPQIKTAEAAQAVRDGAREIDMVINVGQAIAGDFAGVEADINGVVTAVAEAA KDLGLPVATGPESATEGAAIVKVIIESAALNDEQIVGACEAAVRAGAHYVKTSTGFHPAG GASAHAVKLMRSTVGDALGVKASGGIRDAQAAQSMIEAGASRLGLSGSAAVLDGFTA >gi|294971895|gb|ADNU01000023.1| GENE 79 79312 - 79527 138 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRKIITNTVLGATFAMSLATFVACGTITGMSRDANIYGSPAELLFPWSGLLTLLFGSFW IVYVIVSLRRP >gi|294971895|gb|ADNU01000023.1| GENE 80 79712 - 79858 88 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395206|ref|ZP_06805414.1| ## NR: gi|295395206|ref|ZP_06805414.1| deoxyribose-phosphate aldolase [Brevibacterium mcbrellneri ATCC 49030] deoxyribose-phosphate aldolase [Brevibacterium mcbrellneri ATCC 49030] # 1 48 1 48 48 68 100.0 2e-10 MHNCTVHQRRVKASGGIRDAQAAQSMIEAGASRLGLSGSAAVLDGFTA >gi|294971895|gb|ADNU01000023.1| GENE 81 79875 - 81683 1832 602 aa, chain - ## HITS:1 COG:PM1074 KEGG:ns NR:ns ## COG: PM1074 COG1109 # Protein_GI_number: 15602939 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Pasteurella multocida # 5 585 4 532 551 381 41.0 1e-105 MSVDFDAVRAWIADDPDPETRKQLTDLVEATQEPGEESARALDDLADRFSGMLQFGTAGL RGELGGGPNRMNRAVVIRAAAGLTAFLRDTVGEDFTVVIGCDARYGSEDFARDTATVVTA AGGRALMLPARKPTPMLAFAVNHLDADAGVMVTASHNPPRDNGYKVYLGARPQAAVYLAE TVSQASVAHATAGAPGMAFAGIGAASEDVAHERATHGAGAQIVAPFDAQIASHIARVESV ADVARAESGWESVDVTEEYLASIAEVRSRLGVSDAPADLRIVHTSMHGVGNDTTLTALKQ AGFTRITPVEAQAQPDPDFPTVTFPNPEEPGALDLAFETAKAANAQLVIANDPDADRVSI AVPIPDSPGAFRQLTGDEVGLLLGDFIASRTPGTVANSLVSSRALAQAADFHGVPHRTTL TGFKWISRGTDLVFGYEEALGYSVDPQVVRDKDGVSAAVVIAHLVAELHAQGRTVDDELK RIRVRDGIFLTAPYTIRVTNLKHIDKMLDRLASAPPADLGGSAVTEVVDLSEGSASLPGT PGFALLTESGDRVVIRPSGTEPKLKCYLEAVETADESTYPQALAEARAKLDRITADLAEF LQ >gi|294971895|gb|ADNU01000023.1| GENE 82 81691 - 82512 781 273 aa, chain - ## HITS:1 COG:ML0707 KEGG:ns NR:ns ## COG: ML0707 COG0005 # Protein_GI_number: 15827299 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Mycobacterium leprae # 7 270 8 267 268 256 56.0 4e-68 MSTNDSPLESAQQAAQVLNDAAGIDSHDIALVLGSGWGSAAQLLGDPVASTPADQVPGFH TSQVSGHPGTLTTIKVDTQAGPKHALVLGARTHFYEGKGVRAVAHGVRTAAAAGATTIIL TNGCGSTHTDFAPGTPVLISDHLNLTASSPLEGATFVDLTDLYSSRLRAVAKEMDPTLAE GVYAQFRGPHYETPAEVRMARTMGADLVGMSTALEAIAAREAGMEILGISLVTNFGAGVS EQPLNHAEVLEAGQQAGPRISQLLADIVRRILK >gi|294971895|gb|ADNU01000023.1| GENE 83 82588 - 83580 838 330 aa, chain + ## HITS:1 COG:no KEGG:AARI_09270 NR:ns ## KEGG: AARI_09270 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 2 325 4 305 309 111 35.0 4e-23 MMTIRPFAPGDDLALNNILSDPNDPAHHMLRSLVCEDSDSAPVTRTVVAEVASGVLVGVA VCAQSPAHPQRAWFHTEVARELDSEEAAEVSAQLREKLSHAVAGTVLEGLPLRTRVGVGA GSSDPVVGSAGAGSADGGTELFRTRIVRVETLALGGLGADRLDDFVVTATGSVELTRAFS EWYTGVNRADPAASMTLGEFNRRFLSEATGAHGAAMFKRDGQVNAFAVSYPPEQCGEGGA TQESSEATELTVGVMADAVEPRPERDSAEYQAALGDAGALIARLSTDTDVVVEVTSEMPV LTELIDGLIQAGKAHVLYEYATLGSAPLNA >gi|294971895|gb|ADNU01000023.1| GENE 84 83577 - 85598 2139 673 aa, chain - ## HITS:1 COG:AF0197 KEGG:ns NR:ns ## COG: AF0197 COG0365 # Protein_GI_number: 11497813 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Archaeoglobus fulgidus # 7 640 6 627 662 470 39.0 1e-132 MTTREKLWQPSEERIRQSPMYAYQQWLADKKGVHTTGFAELHKWSVDNLDDFWESIWEYF DVIGTRGDGPVRTGDSIEKTTWFPGASVNYAQNLLRHVHTMPDREAVVALHESDPRESYT WKELNGKVGALAAALRDMGVRPGDRVAAVLPNIAETIIALLASATVGAVWSVVNTDFGEN GIADRFAQIEPKVLLTVDGFDFNGTYRNMLPQIESTLSVLPTVEHHILIDRHRDSHPDTY TDLPGQESASATTSVTHHRFSEITATPQDPAFEPVEFSHPLWILYSSGTTGKPKGIVHGH GGIVLDVYKMAGLHNGSDENTRMYFAVATTWMVWNLMVNVLALGATTITYDGSPAYPTPA RLFDIAESENVTQIGTGAALLSLIEKAGINPSESYKLPHLEHIMSTGSTLPGSTWRWAYE QIKHDFQLGSSSGGTDICSGILGANPYDPVYVNELQGKVLGVDAHAFNSQGEPVIGEVGE LVFTQPLPNMPVMFWNDPDGSKYHNAYFVDFPGVWRHGDWATQLPEGPWIIHGRSDSTIN RGGIRMGSADICDVVDQVPGVATSMVIGAEVGDGDYYMPLFVVPARGHTLDEDLKGAVVE AIRTKISPRYVPDEMIEAPAVPRTRTGKLMEVPIKKIFQGADPSTVNRTVAEDVATVDWY VDFARQRVQKKRD >gi|294971895|gb|ADNU01000023.1| GENE 85 85633 - 88968 1286 1111 aa, chain - ## HITS:1 COG:SA0276 KEGG:ns NR:ns ## COG: SA0276 COG1674 # Protein_GI_number: 15925989 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Staphylococcus aureus N315 # 470 701 643 883 1479 164 39.0 8e-40 MANMYSTIVHIVEGDSLSSLHVEAPGYATAADVLTALMTARGIDTPNAYTARNFARAAPT PHERWFEWCTRSPVTVIEQASAPACHAVPEVERKSVSVLAGPDSGFCTPWTRSDFTVGRS SEATLQLFDPHMSRTPTPFAPAAAAALTTLGATHLGTYDPRERTTPPEPLTWPAAPRVTP PRAPHMAHYAIPIVLGVVLMLVTHMWWFLLFSVAGPLSAGVMWWSSRRRYARDLAQALQE FSRAVEQFESDIRTNCARAASAESQRPFSLSRIPVGVGTCCVSATVKAPPEYEPPFDRVA ARVSVPGITRDGHTHLVSNNQVVTVDLERTELVVCGESAPEVARGIIVTLRACGAAVVLD PPPDGPEFLRVGVAASGPVITVTWGETIRFTPAEVADTWIVDCPDSVAANLHCPPPVGAG PVPGRIVPRCMLAHRFVRVLGGAGETGAVTLASMSVEELTRVASHDSRSAVPVGVSESGA VFLDLFADGPHALVAGTTGSGKSVFLSAWIQSLAAVLTPEEVRFVLVDFKGGAAFAPLQN LPHTDTVVSNLDTFLGLRALRYVLAEVTRREELFARAGVSDLPAYNENNAPLPRIVTVID EFQALVHQIPESVEILEQLTALGRSLGIHAILATQRPSGVVTARMKSNISMRVCLRVRDT QDSNDVIDSPDAALLDANAPGLGLISTSHGLTLFRSGHTGAPEPAVMRWRPAGAEDAPQT EVPLPGYENSALQTVNTGRDEVSHHSLGTTPNTIVPPPLPRTFDGTASAVFDTSAGLTPW TYQPDRDGAVLISGGPRCGKTHALHVLAGHASDTHVMVGFGRQGTSMEAAHVYANTEWMH EAALSLLESLPSSHPVFVAVDDSDDLFSPTHRARLDLVLAHRPFALVTGRRGVASAVATR ASTRLTFPPAVAADAVFFGVKPARFAGMKDPGRGLLSSPSIAASDGVDAQVSTHVPFTHQ PVPNVGSGVLVGTSPLGNAVYWDPATGPVLNVLGPDHATAPLLAGLSEHLPRGTVVVLRA HEDSWEFGELTVVASPLDHTPGYGSPLAQARNRGPMLIVGARSPQELGHVARDLPFIPPH DSCAWFVHANVRVPVHVPCSTRKPNDCSGMM >gi|294971895|gb|ADNU01000023.1| GENE 86 89131 - 89568 393 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395212|ref|ZP_06805420.1| ## NR: gi|295395212|ref|ZP_06805420.1| hypothetical protein HMPREF0183_0918 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0918 [Brevibacterium mcbrellneri ATCC 49030] # 5 145 1 141 141 227 100.0 2e-58 MTSHMASPAHREAGSITPLAVGFCVIVLALVTIITIITDYYTAHRKLYAIADSAALAAVE SYQPVPGGEPTFVFDAHGIEKKANQHVARISPPSNLSHIRVSAHIADSRNVHVTAHARYK PVLISPFVPKGIALTSTTKARGSLR >gi|294971895|gb|ADNU01000023.1| GENE 87 89534 - 90052 186 172 aa, chain - ## HITS:1 COG:no KEGG:Bfae_20370 NR:ns ## KEGG: Bfae_20370 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 10 151 3 144 155 77 38.0 2e-13 MTRQLTAPGPGRETLRGTAGHASARDESGTAAIEFIFASVVLLVPVVYIVIAISTLQAGT YATQAIAIDAARYASRHPDTAHARANATASLHLDDFGLTGTPHRVKFSCSEKCDTPGSTV TAHVETRVALPGIPFVFNSDTAGRITVTASHTDIVAPTGGHHDITHGITGSP >gi|294971895|gb|ADNU01000023.1| GENE 88 90072 - 90482 322 136 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_25380 NR:ns ## KEGG: Asphe3_25380 # Name: not_defined # Def: TadE-like protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 13 132 22 141 141 85 41.0 6e-16 MRPSNSLTHLKSDRGSAVAEFVLVAALLSLVFAGVLQVCLTIHVRNTVTDAAVAGARVLA MGDGNADDAREVTRTLIVSSLGERFAGPINVGFDSVHGDDVAVVEVTTAVPVIGMWGPTG VMTRQGRAFVEPVYES >gi|294971895|gb|ADNU01000023.1| GENE 89 90490 - 90717 225 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395215|ref|ZP_06805423.1| ## NR: gi|295395215|ref|ZP_06805423.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 75 1 75 75 134 100.0 2e-30 MFVRFYAFMSTLLLAFTPRPRPRGARYRRSDRGDVPGWVLITVMTAALVVALWALAGEAF TNFFNDSMNKVRNAG >gi|294971895|gb|ADNU01000023.1| GENE 90 90732 - 91670 856 312 aa, chain - ## HITS:1 COG:mll0893 KEGG:ns NR:ns ## COG: mll0893 COG2064 # Protein_GI_number: 13471027 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadC # Organism: Mesorhizobium loti # 141 303 131 296 305 67 29.0 3e-11 MMSIDHPLVIGALGLSVGLSLTFFVLSLPVMRRPRLEDRIGPYLRTTQVAEEKYHLTAPT ETGFGGLARHFAHRALHWLNSRMTTDVSVTLRLSKLGPSHTVDSFRARQVLLIIAGLVVG ALMCTVIIVARGFNPVVCVVLIVLGGVGGHFLNDWLLTQAVKKREERILAEFPTIAELLA LSITAGEGTVDALNRVCHTATGELSDELRIALAQARTGTSLVDALDAMARRTNIQSLIQF VDGLAIALSRGTPLSEVLRAQAADVREEGRRKLMELSGKKEVGMLVPVVLFVLPITVLFA VYPSLAVLKVGL >gi|294971895|gb|ADNU01000023.1| GENE 91 91667 - 92539 479 290 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_25410 NR:ns ## KEGG: Asphe3_25410 # Name: not_defined # Def: Flp pilus assembly protein TadB # Organism: A.phenanthrenivorans # Pathway: not_defined # 5 290 1 285 285 283 54.0 9e-75 MTTSLAGALCGLTLGAGLFCVWWSMWEAPAQKKSPPAFILRTRDELRAAGLHRVSPAQLF TVCLVCGLMVASVTYVFSPALPIAVCFGLFATVAPYQIVKIRARKTSVSRRTLWPEAIDH LSSGVRAGLSLPEAVCGLSARGPVALRPLFEVFAREYRATGSFSLALNRFKESAADPVAD RMVAALHITREVGGTDLGAMLKTLSQFLREDARTRAELTARQSWTVTGAKLGVAAPWVVL GLLATRPETADAYNTAQGTVLLVVGLVISLCAYSVMKRIGRLPEEARVLR >gi|294971895|gb|ADNU01000023.1| GENE 92 92536 - 93762 964 408 aa, chain - ## HITS:1 COG:RSc0652 KEGG:ns NR:ns ## COG: RSc0652 COG4962 # Protein_GI_number: 17545371 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Ralstonia solanacearum # 33 373 60 403 453 228 39.0 2e-59 MDAVDIITSEVRDRIRATGIDPRIDTAASRDVIKDVIADYDERTLKGNLPVLSNPEEAFQ SILDDVAGFGTLQKYLDDPDIEEIWINGPQGVFISRRGVSELTTTILTETDIYDLIERML RTTGRRVDLSSPFVDASLPDGSRLHVVLPDITRKYPSVNIRKFISRTRSLRDLVENGTIT PPAAEFLDAAVIAGANIIVSGATQAGKTTMLNALAGSIPARERVITCEEVFELSLPTRDW VALQCRQPSLEGAGEVTLRKLVKEALRMRPSRIIVGEVREAESFDLLVAANSGLPTLGTL HANSARAAVTKMCTLPLLAGPNIGSAFVTPTVATCIDLIVHVKLDPSGTRRVDEIAAIPG GMENNTVELETVFHATERGALVRGTGFTHLGERFARVGKDIHHILEAA >gi|294971895|gb|ADNU01000023.1| GENE 93 93953 - 95083 1239 376 aa, chain + ## HITS:1 COG:Cgl0778 KEGG:ns NR:ns ## COG: Cgl0778 COG1186 # Protein_GI_number: 19552028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Corynebacterium glutamicum # 1 370 1 368 368 411 59.0 1e-114 MAIDFPSEIASLQQTFSSIREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSH KQGTLEKLQKFDQRIEDVELLVSMGEDEGDEDALNEAAAEVEKLKSELAALEISTLLSGE FDERSAVITVRAGAGGDDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQ VNAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHIDIDENDLRID VFRSSGPGGQSVNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKREE EEAQKKDLAGDIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIR WRKEEEKAAEAAANQP >gi|294971895|gb|ADNU01000023.1| GENE 94 95156 - 95626 499 156 aa, chain + ## HITS:1 COG:Cgl0781 KEGG:ns NR:ns ## COG: Cgl0781 COG0691 # Protein_GI_number: 19552031 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Corynebacterium glutamicum # 4 153 9 158 164 158 53.0 4e-39 MAKDTGKKTIAKNRKARHDYHIEDTYEAGLVLTGTEVKSLREGRASLTDGFALIFQGEAW LENVYIPEYLQGSWTNHSARRKRKLLLHKAEILKISHKLKESGRTLIPLELYFDGSRVKV EIAVARGKKDWDKRQTLREKQDQREAQRAMSLRRNM >gi|294971895|gb|ADNU01000023.1| GENE 95 96154 - 96651 123 165 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISFTFKVSHKPEKSLTFDTVGAHARAISSTLLDQDCRVNTLFVRFVHVFARKSPCYSTT LEKKSLECRENHMTQRPNIKSLGTSSERCPETSLLWRWRELNPRPSANCRFFSGRSTCKC VLGPGERTNTLSQRTELSKSPTHTPNMCEQQWLSKRRQDLEGKHL >gi|294971895|gb|ADNU01000023.1| GENE 96 96842 - 97159 113 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395221|ref|ZP_06805429.1| ## NR: gi|295395221|ref|ZP_06805429.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 105 84 188 188 203 100.0 4e-51 MIVRVENIGRIACEVSPPVIDTNRIGKRVVVDPHLRFEGPIRRVRIEPSRHVDWTLNIDK LSEADKKRVVYVHLETRATGGNVKRQKVLLGDSSRLIDRLPLLWH >gi|294971895|gb|ADNU01000023.1| GENE 97 97335 - 97565 196 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396744|ref|ZP_06806884.1| ## NR: gi|295396744|ref|ZP_06806884.1| hypothetical protein HMPREF0183_2382 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2382 [Brevibacterium mcbrellneri ATCC 49030] # 15 72 12 69 134 85 75.0 2e-15 MGVGVSGHRSLFVGGCVMWFSLHPKSIFLEGCRVTGRFSRENVNKTNKKGVYSTILIEKC RVNGFCLSGRGRGSRA >gi|294971895|gb|ADNU01000023.1| GENE 98 97590 - 97844 221 84 aa, chain - ## HITS:1 COG:no KEGG:cauri_1767 NR:ns ## KEGG: cauri_1767 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 58 63 120 141 75 60.0 6e-13 MGAAGAAGLVEAFRLSEPIQTVFQVPIVIAFLVGVIGFTGALGIPLPWPFVPRWVVKIRK TKRARARQRRVEKRANKKKSRGTE >gi|294971895|gb|ADNU01000023.1| GENE 99 97847 - 98029 215 60 aa, chain - ## HITS:1 COG:no KEGG:cauri_1767 NR:ns ## KEGG: cauri_1767 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 57 1 57 141 66 59.0 4e-10 MRMDTTELLVALGLFLFMILYWIYYILGVRRTPESEAWYDTGDAQGADSDGALYISPTAR >gi|294971895|gb|ADNU01000023.1| GENE 100 98192 - 99127 569 311 aa, chain - ## HITS:1 COG:PM1540 KEGG:ns NR:ns ## COG: PM1540 COG4823 # Protein_GI_number: 15603405 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 6 310 6 309 309 140 32.0 3e-33 MSQASKIFKSHGQQIDILRSRGMKFEDEVEARRTLEHVSYYRLSGYWYPYREMSPNRRQR LDTFVNGTSFEEVFALYEFDERLRAGVFTCLIPIELALRSALGHELGRIDPLIHLKPDLL GPVARNKKPSAKPSRTYTEWRGIFDKELSRSREDFVAHHKKKYSGQLPIWAAVEIIDWGA LSYLYQLAPIDARDTIASQIRLSASQFGSWLRTLNIVRNYSAHHNRMFNRVYTLKPKLPA KHDVPELAPVANAINRSFGQLTLIQYLLAELGIGDRTTLPTVLTTYPQTKILPLSHMGVP TDWATLPLWKY >gi|294971895|gb|ADNU01000023.1| GENE 101 99499 - 101157 1795 552 aa, chain + ## HITS:1 COG:BH3644 KEGG:ns NR:ns ## COG: BH3644 COG0747 # Protein_GI_number: 15616206 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Bacillus halodurans # 40 550 54 555 557 291 37.0 2e-78 MRSAWKKKAFGAVAVVASMALAVTGCAKSQRGEGGGGDVDGHFIFAASSDPKTLDPAFAS DGESFRITRQIMEGLVGTKPGTADPAPLLAESWDTSEDGLSYTFHLKEGVKFHDGTDFNA EAVCANFDRWYNFTGIQQSEAVAYYYGKLFRGFKDKPEDAVYKSCEATDEKTAKVDLAQP FAGFIAALSLPAFSMQSPEAMEKYNADKIGGSAEAPEMSEYAREHPTGTGPFKFEAWNPG QDIKLKLNEDYWGEKGQINQITFRVIDDPVARKQSLEAGEIDGYDLVAPGDVKPLSDAGF NVMNRDPFTILYLGFNQEVKELQDVKVRQAISYAIDKDALIKQTLPEGTKPAVTFIPDSV NGYTEDVEKYEYNQEKAKQLLKEAGYEDGFTIDFNYPTGVSRPYMPTPEQVFSNISGQLE QVGIKTKAVPEKWSPDYLDRIQGGKNHGIHLLGWTGDYNDTDNFVGVFFGTEKPEFGFNN PELFKALSDARKEPKLEKQTPLYEDINKKVAEFAPAVPLAHPAPSLAFSERVEDFPVSPV NDEVFNEIKLSK >gi|294971895|gb|ADNU01000023.1| GENE 102 101279 - 102283 249 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 65 329 43 310 320 100 25 4e-20 MLRLIGKRLLLLIPTLFGLSILLFLWVRALPGGPATALLGDKATPEAVAAVNKAYGFDRP ILEQYFVYMSKILTGDFGRSILTNRPVLEEFAARFPATLELSIFAIIFAVVVGIPLGYWA ARNVGKWQDHLAVLFSLFGVVIPVFFLAFLLKWVFAVELGWLPTDGRQDPRIDATHYTNF YIWDGISTGEFDAAWDAFLHLILPGVALGTIPLAIIARITRAAVLEVQNADYVRTAQAKG LAPRLIRSRFVIRNSMLPVITTMGLQLGLLISGAVLTETVFAFNGIGSFLWGAIFNLDFP VLQGFIIFIALIYSIINLIVDVSYGLIDPRVRVS >gi|294971895|gb|ADNU01000023.1| GENE 103 102280 - 103278 729 332 aa, chain + ## HITS:1 COG:BH3642 KEGG:ns NR:ns ## COG: BH3642 COG1173 # Protein_GI_number: 15616204 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 20 330 9 305 306 221 42.0 2e-57 MTMNLPPKPGGAAANNADNLAASPEQVQAGLTQTTSEPTMDQKGTSVWKDASLRLRKNPA AIAGFVIVALFVLVSILAPVLAPHPGTAVPGAREITPSHIPGPGELSEFPLGLDRFGGDV LSKLIWGAQSSLVIGVVSTALGLLGGMLLGLLAGTFGGWVDGLVMRIVDILLSVPNLLLA VSIAAILGQTPYAVMIAIGVSQVPIFARLLRSSMLTQKGQDYVLAAQTLGLSRGTITMSH ILPNSLGPVIVQATLTLATAVIDAAALSFLGLGGGRPETAEWGRMLTYAQSELGTAPWLA FLPGICIALTALGFTLMGESLREALDPKSRAR >gi|294971895|gb|ADNU01000023.1| GENE 104 103283 - 104944 697 553 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 286 543 3 266 329 273 51 4e-72 MTQTPKETPNLLTIQDLEVSFTTMHGKVQAVEGASMELPAGGTLAIVGESGSGKSTTAMA TIGLLPGSGKVTAGSIVFDGQELVGLAEPKMRSIRGRQIGLVPQDPMSNLNPVSRIGTQI SETLLTHKLATKQTVQEQVVEVMAQAGIPEPERRAKQFPHELSGGLRQRALIAIALACKP KLLIADEPTSALDVTVQQVILDQIDSMTAELGTSVLLITHDLGLAAERAQNLVVMHRGKV VEFGSSRQLLEDPQHPYTQSLVKAAPSVAAARLLTQEHTTGETGAEAKEEEKPLVEISGL TKVYPIRGQDDFYAAKNVSLEIPRGKAVSIVGESGSGKTTTARMLLKLIEPTEGSITFEG KDVLALKGKDLKDFRQRVQAVFQDPYSSLNPMFTVGKIIEEPLAAYKRGNAAERRKRVLE LMEQVALPQHFYRRYPAELSGGQRQRISIARALALNPDLIVCDEPVSALDVLVQDQILNL LKNLQEELGLSYLFISHDLAVVRLISDYVCVMKDGELVEASTSEEVFTNPRHPYTRKLLA SIPGNELGIDEAS >gi|294971895|gb|ADNU01000023.1| GENE 105 104903 - 105172 60 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYHPALIQTAPTPWPPFTSHAHDYTFSFCLSANSSTIATLRTTECLDYYFVSDLILRLF QRRSLSFLHDKERPLVSARFVNSEFVAGN >gi|294971895|gb|ADNU01000023.1| GENE 106 105409 - 105687 354 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395229|ref|ZP_06805437.1| ## NR: gi|295395229|ref|ZP_06805437.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 92 1 92 92 116 100.0 6e-25 MHILFIVLGCAALGIIIAILPWGFTGIIGWLIAGPVAILMLGNFTTTDVRRRAAGMYASR SAATTLYWMAAILTLIAVIVTAILTALWVGRL >gi|294971895|gb|ADNU01000023.1| GENE 107 105684 - 108749 2333 1021 aa, chain + ## HITS:1 COG:no KEGG:ROP_13810 NR:ns ## KEGG: ROP_13810 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 66 942 34 891 891 476 35.0 1e-132 MKNVRVHAFKLLIGFFATFFLLAQSLAGFSTPVHAQPSEDPSQDSGDSQQSGGSDLGSAK PLPEQFSACAAAGGNIDVLILVDESGSLVDSDPNNARVTSGLHLVSRMSKLTKSGNLSVA VSGFGHEYSTVRDWQEVKNDGDVESLRGAINDLSNRTNGIDTDYWTAMDEARKQLANRAH ERGSDAKSCQAIIWFSDGELDYEVRKGNMASKYGETKPFAPDISLKTEDGAKKVEEKARE DICRSGGLADQLRSSRVAMFGVGLGSKDGKEFDLMRSIATGKDSGGKSCGDLTDPVPGEF YLASDIDSLLIAFDSISGLGQKPITNDHGVCVKDFCQDEAHTFVLDNTTLDVDGFATATA DGLRAALQGPDGKIVDLKKDAKNEKTEVSGVPLTYSWETGRSLSFRLDGTSKGKIGDKGP WVGVWRLAFIADEGADSQAKSKSNLHITPGIVPAWPGKDNADVRAGSTLNDVTFALHDRE GNDVPVDSITSTGKFTATFTDSAGKQSTLTDTSTFGDITKPFNWDLGSAPTGGGTLNLSL ELTTASAKDSDGNDVQGTKLSPATVALPVTVQPPLDYPTVPTKVDFGEAKGKIDLNSVLK LGGKGCAWVEPDSTEVIASPAGLDKVQVSSDASSKDNCVKAGEDLGLTLASDQQGNGAIN GTFVVASAPENGQGEPVKTKVEFTASAVKPLNTLNFVTTLIIALLLGPGIPLLILYFVKW RGAKIPSQPLVAVRAQIEKTSTGVTRDGSRFAFNQGDMRNTVMIGSGGSRQIDAAGVTLK TKMGGSPLGPGFVVAEVPMSVSKHDPARIPARLPLAVHNHWLVMRSEGMNENQAEIVVLL AGNIDEKQREKMEDEIAREAGDLMDRLPFTGAQAPAGHDSPFGGPSEPQANPFAEADAPS PAPSSPFGGPGSAGPGSAPQSQPPAGPPPAGPGSQPPAGPGAQPPAGPGVPPSGPPPTGP GFPGPGGGPGAPGPDTSGPGGPGQAPNNPFQNGPGQPGPGHSGPGQSGPGQPGQNPFSFG Q >gi|294971895|gb|ADNU01000023.1| GENE 108 108778 - 112290 3023 1170 aa, chain + ## HITS:1 COG:no KEGG:RHA1_ro01687 NR:ns ## KEGG: RHA1_ro01687 # Name: not_defined # Def: hypothetical protein # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 1 1151 1 1161 1191 816 40.0 0 MYKFLVVGCGGSGGETLARMMDQLRSELMPHGISKLPDGWQFVHVDVPTVPDTDVKGVGN VRDQGGTYIGTAPSSGSYSVLDSAVSQKLQQSGDLDQFVTWAPRKPASVTTPLKNGAGQM RGVGRVITLNRAPDVFQGLQRAVNKMKTTEANAEMAEAARAIPGSGGFDPEGSPMVLVVS SMAGGAGASMALDVCRLLGQVQGVSVNDTCVYMYTSDIFPDRLEGVRPNALGMLGEIVSA QSVSSEEHDVRILEALGQHIDRSGGPSFARVFPVGKYQGLDRTTFGDGTQQGVYRGLARG LAALMVSGSASSSFRQYDLTNKDGLSPNRRYLGWGVEAGERLSWGTFGFGSLNLGRDRYR HYASQRLARTSVDRLREGHLQEGSSAGAQQQLNRLIDSQWDTFLSRVGLPNEVQVRDINQ LATWIRGAAGGQQLDSALRQFVEHQAGSQMPRAQGQSGPNWLASLETYLRSANPHFRQFA SQTVVRTTFDWMLNFQGAFLGSLEDAISDYGLPYARGLMERMKSFLQHELTAACSNLGAN QAPDIMRPSQQVSTSVSAVRGNIVQGDQFERQVINDLHVGLLNGCFIEASKIFADVLSEA PRDFIQPLLKTIDESIQALDLVVNETSRTVGLANVETDVYSAWPSDQDQRVPERFSTAHN EVLITAAEDFQNLYNSHLPATIEGDNGWDAARQKGAAHVISGQWPAAEGSRAPGGLLEVN SDWRPTFYKFDPRSQEQRTITPTSGRYTLHVKANELRYRALEFVNRRNEAFEHYCALSLE DYILGHDGAAPHEIDQRKKDVADKFRKTLTRALPLASVHPDVVSSVHSSAVRYQYKFSSV PFGAAPDLVDALTEVLTSQQSVDTQTIDIFEKVVSQGQTAAGITHVDIFGSFGNLSPIAF DGVLQPVSDRWSRLTSAGQRRDFWTFRRARPLPASLPMSDLERRAMIAGWYVAQLTGQLQ IPDRRNLSRPVRVYRAETQQWIDFPNPLLTPPSEFVGETFDWLPAVLESFLLAIANAHQS PVLGSLIPYQTLRSIYDGSEEEPASGLQIVSARDFLTDWMSTGKTPSGAPSRADADDLEG RYTNARQFLETVHTFAASKLDTSANKSTPSVRVDSRAQGSVTPIFCDLVPDIVQVTEELM TLLDEAKSDAESSGGNSGFANDLPEGFGAF >gi|294971895|gb|ADNU01000023.1| GENE 109 112291 - 114990 1993 899 aa, chain + ## HITS:1 COG:no KEGG:RHA1_ro01686 NR:ns ## KEGG: RHA1_ro01686 # Name: not_defined # Def: hypothetical protein # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 16 854 22 859 907 219 26.0 7e-55 METNLSLVVAPAHLIGVRETLRDWQVSGLVSDFIWIPVEAQDMGRNLNAQLVSHGALKPV DVRYLSGQVQYSRIGVLVLGAVTGSERDAARLSKTGEVGSFVRDVVTQDFGAAQVSAIRA VFATEDSSNKVELPDSNGWVDVVLSPSDSKGPRVGSRPVNSSNIAEVCAFLASQVAPLAG MWDSVPQGTLDDLPPSYQGYRGRLVRSFFRRLDGTAVEDALRDKAFETATGYPLPNFSGT PARYFDDDGVVVDQALQHFWAKHGYLVTPNREQYVSPEPQPISAGEALKMFGTFLGNAIK GTPGALAAGLVDSTKAAVAQTVHGLVFGDRASEYNVVVGGIDASGRPVGWQESMNAAQRI EGALGVDRHNIDMSGVWRSMVLSSLTLLDYGTAGRDMPTLSPQPAIVRDPAVVAPDPEDM FTLKGSVAGRLGAMSVQPADLVHAQEVGRQIKTVAQDPNMQTPDADAQLNEMTDWYDRSR KSFVSRIGETISTNFEARRQEIAERMKNLGRNTEEQDDSEHLLAEAHRILSVKLRQLFGY SAALTVLVFFLAGMDWAPWWLAWTVLGLSVVGSLAGAFGLFMRSQTDIFQVIHRRKKDRE DQEIDVRNLKATISEFTRLGEAYSQYLRWADIVGAFVHRPFGSRTQLARGEQRRFDDLPI SMGSAEYVVDYAQVEETARMLRTEVFYTGWASEQFYNFANVSLQRAGINNFPLSSDMHSL FAEQSTADDSVLTVLAQSLRNNGVDPVLEADYWEQMRKRIDHPGMEAARSSLLSQIHISG EHASQSLEDFRGTVGLEDNQEIRETLDDELLTANAVGFDKNAVIANSVRKQPAGFGEVLV HTQITGDLTPDDLKFAQSYSGDVNWGNSEWSVSDPAQNVQPAQDEQPTTWNNPFGGDAI >gi|294971895|gb|ADNU01000023.1| GENE 110 114990 - 116924 1185 644 aa, chain + ## HITS:1 COG:no KEGG:Mjls_0037 NR:ns ## KEGG: Mjls_0037 # Name: not_defined # Def: hypothetical protein # Organism: Mycobacterium_JLS # Pathway: not_defined # 64 615 108 664 666 213 31.0 3e-53 MSSFDFNDPFEIPEPRIDVPPPRAGNETQEPAWEPPAPYVQPHGAQNQDVEQAGDTQEEP QQLQGIRFAPFNFGQQPTPLTMKAKPQEDGVHLAWKPSETPCVYRVVAQNAGEPHSPDMA EEVVVTQGTTAIDTDRPRHAVRYYQVWRYEAETVEEAQTVQPILHAARRITHGIQNPNIR LDEQYVVGKWDSLEGISSVHVYRVPAKVKTTGVAGPEYRVAGTKPNTQGFTDGQGTPGET YIYQFVSVSHDGFASDPTEFTMSIPIRLQPVTDLEFVLHEPDETEGRRSPEFDLKWSTPV HGRVEIYRTEKPPVSGLEQETDLTATYLNDRGFLPDDARLAMPVHKGGDGTSSMFSVPWP EQWTRAYFTPVVFDGDKVRVGKTIHGQRVRPVTEAKFTERIGRKIISFAWPTGADTVRVY RTHIDGDAQSALSGSPVVQIDESKYRDQGGVSLPGEDDRGGSTYYLVAGLFSGGRDILSK PTRLDSNPLVKLQYEFAMNLNQAGGLDGQLYVKAVASDLREQVSLCVVHNPTRLPLHPDD GARVLLTRISPANDEPRRSVRPHALYAAFENPDSAVYAFAVPQPNGFVRAFLDMRTEDLK RYTLLDPAVVRLQPAEWLSFFYQQQGMQQQPMPPQQQQYQQGNW >gi|294971895|gb|ADNU01000023.1| GENE 111 116924 - 119815 1393 963 aa, chain + ## HITS:1 COG:no KEGG:RHA1_ro01684 NR:ns ## KEGG: RHA1_ro01684 # Name: not_defined # Def: hypothetical protein # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 52 444 3 399 913 122 30.0 8e-26 MSQGQVGGPPTFGHRQGRAVPEKTSPAPAARITMPQTEKPVATSGAVPPTPAPTVAKQPP ATRWAQLTYASFDRADGSPGGWQEKDIVGDPTDEERRTLRRYVMSQFSYHGTLPKFATPE QVSALPVRFAYHAPDNERPGIYAYAVNAGVDSTGRPGNVYSHILMDRNPDTMRPIDLWRS PSFARPANVDDILHTQIAETPQNMQAGNLRMITQVLQTQGYTEPILAAADALMNTQHKGT VVLVSDRQDWSAIVIMAVQYLMSPSLARTVNWSVYERARDIRSDMQIVAVPECDREDVQR MDHTYVICDGDILRIEGDQHVLGQSRAIPVTAFSTLIRACLAQPHELVSRLEALTRMDQW ARVEVHENVQPVWALAALLAMEPGSLDQGTADLALDVATQSFPASARTIDKLFSRVSQGV VERVNGSSDPWSVVSEYPHDAHSAERFVAQRAALIATLEGRAQVPHPSQVVSATELAKDA EVVERAVKRVDQEREHVTESSFAVAEMLCVAGTADVGSNPQLTARLFDLIAQLPQIAPEY GNPIELDARAIDVFTHALLEAENAHIPESPETTSAVPPRPAAPPPRPTAPPPAAPARPSA PPPVPPAKSPEPASPWAPKSDSPWAPPGERSGSQPAHTTANSDTQQARPVAETLAVSAPL ARALVSNGLPLPVKERVDTNAFTPLTAQLTALILNNQPQLAVPLTRYLQTLSPDKQPTRV LKHIVTLPIEVAVECFHSAPQLFDTDLILTLINAHAWSPELKNLCEYLVAGGSASRRVWY PCMLLDAYDQPRDIDSATLMAVTYDLGDWKRHHQQAMSSYLYTYQLASTLFPGSYRLEKN APVQSVNVDDIDPASVDPDRVRRLLYLAHPDIQPEKLVVLAVTDRKVQEAMPSATLRVVD MMQGNRRIINAVCEQFADDICAEDVVDCAKDFITARGGTLRKIGMGIDVKNTLKSLQRQE AQQ >gi|294971895|gb|ADNU01000023.1| GENE 112 119812 - 120798 654 328 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395235|ref|ZP_06805443.1| ## NR: gi|295395235|ref|ZP_06805443.1| hypothetical protein HMPREF0183_0941 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_0941 [Brevibacterium mcbrellneri ATCC 49030] # 1 328 1 328 328 555 100.0 1e-156 MTVFMLNRGASVSVNRSRLTLSVTLPSQSDTINVVDDSGAAIDFVAPAPGFVIIPEPPDS FTVSVQSGAQEFPRGSSIFANVKVDATDYTDEDEVRLSEGIDPSGLRSVNILQFNADGGS LRVELPAVSTVAQDLSSSAEAVRVEARRQLGNVDGTSRPVVIALDASASAHTLDAKNVQE TLEHIIGYASQVTSENNISGALVSDRYVPVASGELAELPQRMVKELESAPLRSSSVITSE ALIATLPQDALVIYVSDSLPIDFARLGTCGVEVKLVVLMSREAWDVETRGVEIPVPATHV DTHALANMPEASRSAALSQFVQALSQRS >gi|294971895|gb|ADNU01000023.1| GENE 113 120800 - 121981 699 393 aa, chain + ## HITS:1 COG:no KEGG:ROP_13750 NR:ns ## KEGG: ROP_13750 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 1 393 1 385 389 276 40.0 1e-72 MAKCAVCLYDVPYDTYTWALENTGSAPVVDNNASFYLGREVRIEATLDLDADVMDNMYVQ PNAEAALNEIVAGGGLPQSVRLGDELCPICHNPLAPGWRFANVTVVAMCGARASGKSLYI ATAVKELKRELLSKGTSLQMYTDITDENYQTYYERPLFEQMGLMGATVRADTGQAYQLDP LIFSVGGNHQNGRQLLVLRDVAGEELENPPENDGHLDFMKRADVILFMFDPLSVDAIARR LNDLVPTQARSSGSPVQVLDNLQRRIGTTEPVPRVGVALSKFDVMQTLADIDDQDWSRVM ANRGSAMMRERLDSDDPEADQMLLHQEVKSLLLRMGADEIVNKIENPHTGQQIPHRFFAI SALGYAPVGEQVSSLGIAPFRVLDPLQWAMEAR >gi|294971895|gb|ADNU01000023.1| GENE 114 121986 - 122870 594 294 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395237|ref|ZP_06805445.1| ## NR: gi|295395237|ref|ZP_06805445.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 261 1 261 294 410 100.0 1e-113 MILGTPLVFALLMAHLVVSPVVGIQLARIIGFSWWIGLLVAVFGGGLGTLVMGVWALVVS FGRLGEELQVQPPRQAFEGRSDLAFNTLGKLLAAIGPIVFIIPIVLTHWLPWSAGGVLPA GDQRFLIGIGSLLLAFALICALCAAPRWANLFTLSVCSLAFNQTFFSFKETDASNLEAGF WILFIATVIIWLGCLIFAIMMKGPQKRQEQPPVVQHHQQQNAPAMAGAPGGPGNMGPGTA GPGYGPGPVMPGPGQVGPGSAGPGYGGQGTGGPGYGSGPGYGSGPGYGSGQQQY >gi|294971895|gb|ADNU01000023.1| GENE 115 122931 - 123944 979 337 aa, chain - ## HITS:1 COG:PA1421 KEGG:ns NR:ns ## COG: PA1421 COG0010 # Protein_GI_number: 15596618 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Pseudomonas aeruginosa # 5 313 8 310 319 249 43.0 4e-66 MSETPLGPADYSLTPRFAGPPTFGLLPRIDEVEKERPGAPIDVKVVGIPFDAGVSYRSGT RFGPQHIRQASKLLRPYNQATDIHPFSILQIADCGDVGVNPFDIDKAVSEVETLANELRS DGSKLLTLGGDHTLALPNIRSVAKDHGPIAVLHFDAHLDTWDTYMGAPYTHGTPFRRASE EGLLDLQRCMHVGIRGPLYGKKDLEDDKVLGFQVLRCDDYQFRPLPEIVDAIRARLGDAP VYLSVDIDVLDPSAAPGTGTPEAGGMTSRELLNSIRGLQGLNVVGAEIVEVSPAYDHAEL TGLAAAQVGYEILSLWAAQKAGHTSPTGPIAERFAQN >gi|294971895|gb|ADNU01000023.1| GENE 116 124014 - 124886 978 290 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395239|ref|ZP_06805447.1| ## NR: gi|295395239|ref|ZP_06805447.1| TPR repeat protein [Brevibacterium mcbrellneri ATCC 49030] TPR repeat protein [Brevibacterium mcbrellneri ATCC 49030] # 1 290 1 290 290 378 100.0 1e-103 MKKLSLGTLISIVVGLLILAVGIYSAVASSFLALASSAYNKGNYDSAIAHAKRYDSFVPF DKHKGPFNVGTALAAKGELDAAEDELRTALDLTPERDECAVRQNLSAVIEEKSNVAWEAD RRDEAKKLLEEAKKISTDAPEGCRQNQQKQNMDQAEKRMDQTEQERKEQEEEEKRKEEEE KKKKEQEKKDGDKQKDQGDGGEEMKKDSSDGGDDPTQDGDSGNDPGEEDKGSGDGDSNGA GGAGSDQPSGKGSEEGTDPKQEELAKRNEDAQGRQNNDQSSGSSWSDKPW >gi|294971895|gb|ADNU01000023.1| GENE 117 124883 - 125869 804 328 aa, chain - ## HITS:1 COG:no KEGG:RSal33209_3456 NR:ns ## KEGG: RSal33209_3456 # Name: not_defined # Def: hypothetical protein # Organism: R.salmoninarum # Pathway: not_defined # 1 271 1 285 358 191 38.0 3e-47 MTFNPLIPFVVLVPLVVVVMIGCCVAAFTRSHQRVMWCLRAVVVFILATAIARPGIPTEV VVLKQEASAQVYLVVDVTASMIAEDWDGSEPRLEGLKKDLTELVDAMPGAKFSLITFGSE SHVRVPLTTDDAAVKSAISILAPEITRSSAGTSPFAPAETVSSRLAKGQEAHPGEDQYVF YFGDGEKTSEKGADSFDGDFNLAGGAVFGYGTEKGGKMKETLDSFLSRDPEYIDDPETRE PALSKIDESTLKKIASSMGTDYHHRTARSKITQDYSVPSFEQSFVDKKDQRGVDELFWIP LILVYAWIVVETTMALKRVREIARIGRK >gi|294971895|gb|ADNU01000023.1| GENE 118 125866 - 126840 799 324 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_21530 NR:ns ## KEGG: Asphe3_21530 # Name: not_defined # Def: von Willebrand factor type A-like protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 323 1 346 347 204 40.0 4e-51 MVLKFWWLALILLVIAGVVVLLLSRPRSLKGSVPVAYTRRITSLPGFVARKRRVLIGGLA IVAVTVIGGASALAGISRPVTTETLNPEQKQRDVMLCLDASGSMASYNAKILDTYADLIK SFKGERIGMTVFNSAAVSVFPLTTDYEMASEFLEDAQLGFESNGLRGINFYQGTVDRSID GSSLIGDGLASCLNNFDRNDEERSRSVIFATDNQLAGNPIYELMEAAELAKKHKVRVYAL APKGFFAASKLDELKQAAELTGGEMFTMGSGGGARGVIQKVQQEEAALTPGDAVTLTHDH PAIPLSITGVILLIILVLAWGVKL >gi|294971895|gb|ADNU01000023.1| GENE 119 126831 - 127280 451 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395242|ref|ZP_06805450.1| ## NR: gi|295395242|ref|ZP_06805450.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 149 1 149 149 275 100.0 1e-72 MLVDKLHPLLQAHPALLVCAIAGILLGLLVLTWPLVSRFLRSGNKDLEVPTHVRTKYESQ LTALEEQFAAEELSGRLVAQKLGELVRQFAFDAWGHKIDHMTLAELRRMGLRPVAHAVEH LYVAEFATEEATDVAPLFAEVRKLVGMWS >gi|294971895|gb|ADNU01000023.1| GENE 120 127267 - 128103 684 278 aa, chain - ## HITS:1 COG:BB0175 KEGG:ns NR:ns ## COG: BB0175 COG1721 # Protein_GI_number: 15594520 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Borrelia burgdorferi # 1 197 18 212 291 72 25.0 9e-13 MNFHARRLTRRLLDGDYASVYHGHSLDFDDLREYVPGDEIRDIDWKASARHSTPLVKRYV AHRRHALMLVVNTGVELDASSAGGELKRELAILMAGMAGYLAVRHGDDVSMVYGSSGGTG ATDSAGSEAHLESILRTILHSRTLDAGDINTQLSWVARNVSRRKLLFVISDAGVPVSPKL VQRLSAQHDFMWVTLTDADLIAASHLGDLRGLGVGDDTNIPKSLLSRELQAEYERQEEAR QAEFEHALKTVSHVELSHTKDTLHELHRLMKRHANARR >gi|294971895|gb|ADNU01000023.1| GENE 121 128133 - 129113 889 326 aa, chain - ## HITS:1 COG:BB0176 KEGG:ns NR:ns ## COG: BB0176 COG0714 # Protein_GI_number: 15594521 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Borrelia burgdorferi # 8 326 17 337 337 280 45.0 2e-75 MSTTSQEEVAHAGALLANIESYVDTYVVGQQRLRESLLIGLLTGGHILLESVPGLAKTTA AAALAGSVEGKFARIQCTPDLLPSDIIGSEIYNSATGSFETRLGPVHANLVLLDEINRSS AKTQSAMLEAMQEKQTTIGGVRYDLPSPFLVLATQNPIEQEGTYELPEAQLDRFMLKDIL DYPTHEEEIEILNRIDAGVFDSQVESACSVEDVVELRAFVKKVYVDPAISNYLVAIVNAT RNPERYIGPLARFIDCGASPRASIAFTQAARALAVMHGRNYAVPEDVKSLALRVLRHRII VGFEGAAEGVTSETIIHELLRVIPAP >gi|294971895|gb|ADNU01000023.1| GENE 122 129668 - 129919 268 83 aa, chain + ## HITS:1 COG:ML1736 KEGG:ns NR:ns ## COG: ML1736 COG0695 # Protein_GI_number: 15827934 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Mycobacterium leprae # 2 74 4 76 80 104 63.0 4e-23 MITVYTKPACVQCTATYRALDARGLEYRSIDLSVDTDALDVVKAMGYMQAPVVVTDDDHW SGFRPDKIATLSGGGAVSSSGVA >gi|294971895|gb|ADNU01000023.1| GENE 123 129920 - 130333 288 137 aa, chain + ## HITS:1 COG:AGc104 KEGG:ns NR:ns ## COG: AGc104 COG1780 # Protein_GI_number: 15887422 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 131 3 132 132 146 57.0 1e-35 MLIVYYSSPSEYTHRFVQKLSHESRRLPLLTSEDTIEVHEPYVLITPTYGAGPNRGSVPK QVKKFLAQPVNREHIVGVIGAGNTNFGSNYCRAAKLVSAKLQVPVLYMFELLGTQDDVEK VDKGLETLCQRQRMNAT >gi|294971895|gb|ADNU01000023.1| GENE 124 130303 - 132465 2129 720 aa, chain + ## HITS:1 COG:AGc106 KEGG:ns NR:ns ## COG: AGc106 COG0209 # Protein_GI_number: 15887423 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 720 25 728 728 1186 81.0 0 MSTTAHERDLETIIREETDLDYHALNAMLNLYDENGRIQFERDRQAARQFFLQHVNNNTV FFHDLAEKLNYLVEHEYYEKEVLDQYDFEFISELSKFAYSKKFRFQTFLGAFKFYTSYTL KTFDGKRYLERFEDRVVMVALFLARGDRELARNLVEEIIAGRFQPATPTFLNAGKKQRGE LVSCFLLRIEDNMESIGRSINSALQLSKRGGGVAFSLTNIRESGAPIKKIENQSSGVIPV MKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPD ITFQLAKKNEDMYLFSPYDVEQVYGVPFSDISVTEKYDEMVDDARIRKTKIRAREFFQTL AEIQFESGYPYIMYEDTVNRANPIDGKITMSNLCSEILQVSEASEYNADLTYAHVGKDIS CNLGSLNIAMAMDSDDFGRTVETAIRGLTAVSDTSNISSVPSIERGNNMSHAIGLGQMNL HGYLARESIHYGSEEGLDFTNMYFYTVAYHAVRASMEIAKERGVAFEGFERSKYASGEYF EKYTQQEWVPRTQKVADLFEKAGVHIPTQDDWAALRDDVATYGIYNQNLQAVPPTGSISY INNSTASIHPIASRIEIRKEGKIGRVYYPAPFMTNDNLEYYQDAYEVGYEKVIDTYAEAT KHVDQGLSLTLFFKDTATTRDVNRAQIYAWRKGIKTLYYIRIRQMALQGTEVEGCVSCML >gi|294971895|gb|ADNU01000023.1| GENE 125 132493 - 133467 1042 324 aa, chain + ## HITS:1 COG:ML1731 KEGG:ns NR:ns ## COG: ML1731 COG0208 # Protein_GI_number: 15827930 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Mycobacterium leprae # 1 324 2 325 325 522 80.0 1e-148 MSEKLKLVSHVDAINWNRIEDDVDMEVWDRLTANFWLPEKVPLSNDVQSWATLTDDEKLL TMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCNT REIDEAFRWSTENQNLQKKAQIIVDYYRGDDPLKRKVASTLLESFLFYSGFYLPMYWSAH AKLTNTADLIRLIIRDEAVHGYYIGYKYQRALANESTERRDELKDYTFALLYDLYENEVQ YTHDLYDSVGLSEDVKKFLNYNANKALMNLGYEAMFPSTVTDVNPAILSALSPSSDENHD FFSGSGSSYVIGKAENTEDDDWDF >gi|294971895|gb|ADNU01000023.1| GENE 126 133575 - 134561 1085 328 aa, chain - ## HITS:1 COG:CC2372 KEGG:ns NR:ns ## COG: CC2372 COG2070 # Protein_GI_number: 16126611 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Caulobacter vibrioides # 4 327 3 323 335 397 66.0 1e-110 MSELPDILRTPLAAPIISSPMFIASGPDLVKAQCQSGVIGSFPTLNARPQELLDEWLTDI TESNAQYAAANPGAPVGPLAVNLIVHRTNNRLEHDLGVVVDHKVPVVITSLGAREDVIEA VHSYGGIVLHDVINNRFAHKAVEKGADGLIAVAAGAGGHAGALSPFALVREIREWFDGPL ALSGAIAHGHSVLAALAAGADFAYVGSAFLSTPEANVVDGYRNMIVDSSADDIVYSNLFT GVHGNYLRGSIEAAGLDPENLPVSDPSAMSFESTASGERAKPKAWKEIWGSGQGIGHITG SVPARELVANLVSEFEAAQEDLRNKLAR >gi|294971895|gb|ADNU01000023.1| GENE 127 134735 - 135508 940 257 aa, chain - ## HITS:1 COG:MT1100 KEGG:ns NR:ns ## COG: MT1100 COG1024 # Protein_GI_number: 15840505 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 1 255 1 255 257 315 66.0 8e-86 MSYETIKFETDNGIATITLDRPKALNALNLQVLTEVTEAAAQADADDNVRVIVITGEGRA FAAGADIKEMSELDFAKAYRADWFEGWNRLTAVRKPIIAAVNGFALGGGCELAMMCDILI ASEKAKFGQPEINLGVLPGMGGSQRLTRAIGKAKAMDLCLTGRMMDAEEAERTGLVARVV PHDELLDTVFDIAKTIASKSLIASAMVKEAVNASFETTLQQGLLFERRLFHSTLATNDQK EGMGAFVEKREPKFTDS >gi|294971895|gb|ADNU01000023.1| GENE 128 135505 - 136551 1236 348 aa, chain - ## HITS:1 COG:ML2401 KEGG:ns NR:ns ## COG: ML2401 COG1024 # Protein_GI_number: 15828291 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium leprae # 8 334 7 332 345 269 42.0 6e-72 MSEASEPQVIVSVDNGVGRIELNKPKAINALGVDMINTVNEALGAWKDDDSVRAVLITGR GERGLCAGGDIKAIYKAITEGSTDNAKFFRHEYFMNYTLAEYPKPVIAIMNGITMGGGVG ISAHGSVRIVTDSTKIGMPETTIGLFPDVGATHILARMPQHVGMYLGLTGLPIGAGGAIA YGLADYYVPDASVPELVKALAENSGDVAEVVAQFAQDAPAVELADDVSWIAECFAKDSPQ EIVEALRSHESEKAQSTADLLATKSPRSVAVTFELIRRAASMSLADVLEQDLRTATNIAK YPDLTEGIRAQVIDKDRNPKWNPASLADLDPQEVESIITTPVQDKVFS >gi|294971895|gb|ADNU01000023.1| GENE 129 136552 - 137715 1167 387 aa, chain - ## HITS:1 COG:BMEI0689 KEGG:ns NR:ns ## COG: BMEI0689 COG1960 # Protein_GI_number: 17986972 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Brucella melitensis # 10 385 9 384 385 484 62.0 1e-136 MAHPAAALTFGLTDDQREIANMARTFADEMIAPHALEWDENHHFPVDVIKQTGELGMASI YVSEESGGSGLGRMDAALIFEALSTACPAVAAYISIHNMVAWVLDKFADEDQKQRWLTPL TNFDKLSSYCLTEPGAGSDAAALATSARLDGDHYVLNGVKQFISGAGSSDSYLVMARTGD VGAKGISAFMIDKDTPGLSFGTNEKKMGWRAQPTRQVMLDNVRVPVEDRIGDEGTGFKIA MSGLDGGRLNIGACALGGAQSALEKAVTYMSERQAFGAELNQFQALRFEVAGMQADLEAA RSFLWRAASAYDANDPNTTLLSAMAKLKSTDISFDVANRALQIFGGYGYLAEYGVEKLVR DLRVHQILEGTNEIMRVIISRKSTGVA >gi|294971895|gb|ADNU01000023.1| GENE 130 137769 - 138263 351 164 aa, chain - ## HITS:1 COG:MT0762 KEGG:ns NR:ns ## COG: MT0762 COG1846 # Protein_GI_number: 15840145 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 5 156 7 161 165 142 51.0 3e-34 MTHFDPLEEAKRKWIDDGNSEFADGMSFVTSIMRSHQIMLGRVEAVLRPMNLTFARYELL TLLRFTKTGKLPTSKVSQRLQVHPTSTTNAVDRLEKAGLVTRETHPNDKRTTLVCLTEEG RELSERATVALNEKVFASPGLDPEDLTRALELLAKHRKSSAHLL >gi|294971895|gb|ADNU01000023.1| GENE 131 138358 - 139062 576 234 aa, chain + ## HITS:1 COG:BS_yoqW KEGG:ns NR:ns ## COG: BS_yoqW COG2135 # Protein_GI_number: 16079108 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 21 229 29 221 224 123 36.0 4e-28 MASDPADIGRELGVEHERYAFSPRYNVPPGSALPIVCDSVSDTGEILRCLETAGWGLVPG WAKDLKIGFRAFNARSETVADKPMFRSAFARRRCVVPVSGYYEWAVEDGEKTPWLMHGDG WLFLAGLYEFAKCDALGIPETDPRVTEGWYVSTTILTMPSQGHLVDVHDRMPLMLDREGV DRWCEQVETKGEALSILDVALQAVDVDRVERYRVSRAVGNVRNDGPELVAPVSE Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:19:06 2011 Seq name: gi|294971890|gb|ADNU01000024.1| Brevibacterium mcbrellneri ATCC 49030 contig00026, whole genome shotgun sequence Length of sequence - 3646 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 782 255 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 2 2 Op 1 . + CDS 690 - 887 90 ## 3 2 Op 2 19/0.000 + CDS 923 - 2137 669 ## COG4585 Signal transduction histidine kinase 4 2 Op 3 . + CDS 2098 - 2802 525 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 2974 - 3006 1.0 5 3 Tu 1 . + CDS 3321 - 3645 74 ## Mlut_00370 conjugative relaxase domain protein, TrwC/TraI family Predicted protein(s) >gi|294971890|gb|ADNU01000024.1| GENE 1 3 - 782 255 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 238 1 243 311 102 29 3e-22 MTRVITTHELTKQFKTHTAVDALNLDVPKGHVYGFLGPNGSGKSTTMKMILGLTQPTSGD IEILGEPLTRASRTKLLPSIGSMIEAPPGYGHLTGRENMRIVQDMLDLSTAQIDHALATV RLTGQENKLVRNYSLGMKQRLGIAMALARNPALLILDEPTNGLDPAGIEEIRMLLMDLAS QGITVMVSSHLLDEIDKMASVLGILSSGKMIFQGSRDQLFEKSVPDLIIETSDPQAALAQ GLTATRVPEGIRMSGIDKDQ >gi|294971890|gb|ADNU01000024.1| GENE 2 690 - 887 90 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLWDVEVQGVNGGVGLELFGQFVGGDDAGHGCLVSVGFVTPSTIPGIVTWQIVLRHELG LHAVV >gi|294971890|gb|ADNU01000024.1| GENE 3 923 - 2137 669 404 aa, chain + ## HITS:1 COG:BS_yxjM KEGG:ns NR:ns ## COG: BS_yxjM COG4585 # Protein_GI_number: 16080941 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 178 400 180 393 406 86 29.0 7e-17 MEPFTSPATRDRLRAVWQGQPWAADLLLGALGGFLGAISRPTLSFVTYEQTVYSIIVFGC SVALTFRRIRPRLSLAAIGVLLVLHLVTVQELTLFAGAVCLIAAYTTQTQLFAPWRWGYV AVIYVGAAAAVLTSSTPAADSEWKVRLAIAAAAASLVTVALLAGTVRRTRKARYEDALER AAVLEARQTVERRLAATEERTRIAREMHDVLGHSLNTIAVQAEGARYLIRTDPDRTDQAL AVIGRLSRTAVDDVRDLINVLGTDHDTEALTRPTPSLRDIGALISELQHTRAPIRLHVDG DLGAVPDQVGLAGYRIVQEGITNVVKHAYGAAASVRIVVHDRAVDLTILNTSPSQSQTTR RDGSHQGIIGMQERARALGGTFTAGPNPNTGGWCVSASLPWRQP >gi|294971890|gb|ADNU01000024.1| GENE 4 2098 - 2802 525 234 aa, chain + ## HITS:1 COG:BS_yxjL KEGG:ns NR:ns ## COG: BS_yxjL COG2197 # Protein_GI_number: 16080942 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 9 232 1 218 218 151 37.0 1e-36 MVRLREPAMEAAMITVGLADDEPLFTAGLAMILDAQPDMSVLWQAIDGADAIRQHNHEAP DILLLDIQMPTLDGLATTQHLITAGTQSKIIILTTFDTDEYVLTAIESGASGFLVKNTAP NDVVAAIRTVHDGDAVISPGPTRRLFTTFRKRPGGPAACPSPTDSRLADELTPRERDILA LIARGRTNQEICDELWLTMPTIKTHIGNLRAKTQARDRVQLVLFALRVGIAELT >gi|294971890|gb|ADNU01000024.1| GENE 5 3321 - 3645 74 108 aa, chain + ## HITS:1 COG:no KEGG:Mlut_00370 NR:ns ## KEGG: Mlut_00370 # Name: not_defined # Def: conjugative relaxase domain protein, TrwC/TraI family # Organism: M.luteus # Pathway: not_defined # 1 106 1 106 1174 152 71.0 5e-36 MSAGDGYTYLLRTVAAGDCDRSLSTPLTRYFAEAGTPPGRWLGSGMTALGNGELAPGAQV SEVQLQSLVGMGRDPITGNPLGRAYPVYSSTAERVADRVEQLDPSLGS Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:19:15 2011 Seq name: gi|294971887|gb|ADNU01000025.1| Brevibacterium mcbrellneri ATCC 49030 contig00027, whole genome shotgun sequence Length of sequence - 1416 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 20 - 66 1.7 1 1 Tu 1 . - CDS 233 - 1414 713 ## ROP_10770 hypothetical protein Predicted protein(s) >gi|294971887|gb|ADNU01000025.1| GENE 1 233 - 1414 713 393 aa, chain - ## HITS:1 COG:no KEGG:ROP_10770 NR:ns ## KEGG: ROP_10770 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 185 333 225 394 421 90 32.0 1e-16 KQAEDVYELELCVSMPEKEEWLKAQAGITVTIPVLHFLTHLPPPRKDKRWGEGSGKDPGA DKHRPENQDPGRNHKFRKQRTEQYSFRVEEKERRSSETNETEEQAFQHQGSSAPPGVGSG YDERISGNQGTGVPSGAGGSPGSEETLNPEEFLNTDEPQIAGEPVGSGSGLDFGLPIKVD PDVRVPVMMNGRVPLDAKTADELIAQAKWVYRMFTDPETGVVLESTPTKYYIPAALKRMV EARHPDCSVPWCATPARVCEKDHIEPFNHQDPESGGLTVMENLHPLCKRHHQEKTQKRLR VDKMDDGSLAWVFPRIGAMLVYPPESRINQLQYERLLEYFDTGDQDISHTINEYQATEHE TARHSEPRVGHSAGEVFNGDSRPWEPSEEPPPF Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:19:26 2011 Seq name: gi|294971872|gb|ADNU01000026.1| Brevibacterium mcbrellneri ATCC 49030 contig00028, whole genome shotgun sequence Length of sequence - 11310 bp Number of predicted genes - 15, with homology - 15 Number of transcription units - 7, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 458 356 ## Cpha266_0281 abortive infection protein 2 1 Op 2 . + CDS 535 - 1251 703 ## gi|295395265|ref|ZP_06805470.1| possible ribose 5-phosphate isomerase 3 1 Op 3 . + CDS 1270 - 1533 248 ## gi|295396727|ref|ZP_06806871.1| hydrogen cyanide synthase HcnC - Term 1403 - 1450 5.2 4 2 Tu 1 . - CDS 1546 - 2565 614 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 5 3 Op 1 2/0.000 + CDS 2596 - 3513 921 ## COG0447 Dihydroxynaphthoic acid synthase 6 3 Op 2 . + CDS 3553 - 4800 778 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 7 3 Op 3 . + CDS 4823 - 5758 1071 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 8 4 Tu 1 . - CDS 5801 - 6085 385 ## gi|295395270|ref|ZP_06805475.1| C4-dicarboxylate transporter 9 5 Op 1 . + CDS 6151 - 6492 333 ## Lxx01480 membrane protein 10 5 Op 2 . + CDS 6495 - 7019 395 ## gi|295395272|ref|ZP_06805477.1| conserved hypothetical protein + Term 7216 - 7243 0.1 11 6 Op 1 21/0.000 - CDS 7012 - 8076 978 ## COG0477 Permeases of the major facilitator superfamily 12 6 Op 2 . - CDS 8079 - 8354 199 ## COG0477 Permeases of the major facilitator superfamily - Term 8499 - 8546 11.2 13 7 Op 1 8/0.000 - CDS 8567 - 9589 1102 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 14 7 Op 2 . - CDS 9589 - 11085 1236 ## COG1333 ResB protein required for cytochrome c biosynthesis 15 7 Op 3 . - CDS 11130 - 11309 157 ## gi|295395277|ref|ZP_06805482.1| cytochrome c biogenesis membrane protein Predicted protein(s) >gi|294971872|gb|ADNU01000026.1| GENE 1 3 - 458 356 151 aa, chain + ## HITS:1 COG:no KEGG:Cpha266_0281 NR:ns ## KEGG: Cpha266_0281 # Name: not_defined # Def: abortive infection protein # Organism: C.phaeobacteroides # Pathway: not_defined # 7 142 149 284 289 126 47.0 2e-28 SSVARGRVLDAWWGWLPSLLVTSLVFGLAHITNPEASLFGAFAIALEAGVLLGAAYFLTR RLWLAIGIHTGWNFAQAGFFSSDVSGNGDTAGLLEATWHGPAWLTGGDMGIEASVITIVI ALSAGVLMLVLAHTHGMLKPSVKREQRMLQP >gi|294971872|gb|ADNU01000026.1| GENE 2 535 - 1251 703 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395265|ref|ZP_06805470.1| ## NR: gi|295395265|ref|ZP_06805470.1| possible ribose 5-phosphate isomerase [Brevibacterium mcbrellneri ATCC 49030] possible ribose 5-phosphate isomerase [Brevibacterium mcbrellneri ATCC 49030] # 1 238 1 238 238 308 100.0 2e-82 MKTIRTAFATVAIGASLTLAACSTGEPGAPTEGTNEGQQQGQDQGQGSGDDQAQNSAYTK EQVEQAFKDAGYELQANAQPPTMKNLEQAKIEPAECKGVLLNQVQRIDETTSDKTIVGTK GQEAAASGVVYESEDEAKKELANSKDGISKCSTITMDMGGQKLTVTTETKDGSVDGADEA LVMSMELKDIGSGPISTVTTRKGNVLVSGTTIGAGTTGGGSDDAEMSKEVQTILEKLG >gi|294971872|gb|ADNU01000026.1| GENE 3 1270 - 1533 248 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396727|ref|ZP_06806871.1| ## NR: gi|295396727|ref|ZP_06806871.1| hydrogen cyanide synthase HcnC [Brevibacterium mcbrellneri ATCC 49030] hydrogen cyanide synthase HcnC [Brevibacterium mcbrellneri ATCC 49030] # 15 85 9 79 113 110 77.0 3e-23 MKSRDIVHSMSRDFLCDKHVRWFSLHSKFIFLEGCRVTGRFWAENVNKTNKSGVYSTLLF EDCRVNGSSHLRGVNDDATHLLAGSWH >gi|294971872|gb|ADNU01000026.1| GENE 4 1546 - 2565 614 339 aa, chain - ## HITS:1 COG:ML2268 KEGG:ns NR:ns ## COG: ML2268 COG4948 # Protein_GI_number: 15828213 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Mycobacterium leprae # 11 331 6 319 334 233 47.0 4e-61 MDARDLPHDPSELFSEMHVVTLPMVTRFRGITERELMVVKGPAGWAEFSPFVEYQVDEAS RWLRATVEAATTEFPTPVRDTVRINATVPACPAHEVGGILGRFPGAEVVKVKIAARGLAS VEEDLERVSAVLKLSSARIRLDANGAYSVSEAANAMRRFSDLPGFVERAEYIEQPCARVE DLAAVREQVEGVRIAADESIRKTEDPLRVAQLGAADHIVVKVQPLGGVRAAIRVVKECGL PATVSSALESSVGLSAGVALAASLEDESAAGLGTAALLSADVVTNPLRAHGGVLPVGRVE PSQNLLEKYRAQPARAEWWVRRLHACWARLLEGRECLVS >gi|294971872|gb|ADNU01000026.1| GENE 5 2596 - 3513 921 305 aa, chain + ## HITS:1 COG:MT0573 KEGG:ns NR:ns ## COG: MT0573 COG0447 # Protein_GI_number: 15839944 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Mycobacterium tuberculosis CDC1551 # 7 305 20 314 314 471 77.0 1e-132 MTVSDIFDPTKWREVQGFDFTDITYHRAINPDGSDFGCVRIAFDRPHVRNAFRPHTVDEL YRALDHARQTPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYAGGETAETVDPA RAGRLHILEVQRLIRTMPKVVIAVVPGWAAGGGHSLHVVCDMTIASEEHAKFKQTDADVG SYDAGYGSAYLAKMVGQKRAREIFFLGRTYSAGDMYDMGAVNEVVPHAELEDAALHMARE IMSKSPNAQRMLKFAFNLVDDGLIGQQVFAGEATRLGYMTDEAVEGRDAFLEKRDPDWSP FPWYY >gi|294971872|gb|ADNU01000026.1| GENE 6 3553 - 4800 778 415 aa, chain + ## HITS:1 COG:Cgl0445 KEGG:ns NR:ns ## COG: Cgl0445 COG0318 # Protein_GI_number: 19551695 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 46 405 62 375 376 177 37.0 3e-44 MFNLFAGALDGTHTLVLPGGPITELTAVTDPATTPAATSGATCETALVVHTSGSTGAPKA VALSAAALTASARSTERFLHGPGQWLLALPHTHIAGAQVILRSLQAGTKPVVHTGAFSAD SFAQAAQKLTGDLPLYVSLVPTQLVRILQSTRAIQAARRFATILLGGAAISPALLERAHD AGLNIVRTYGMSETGGGCVYDGVPFDAVTLKLDDQSRVMISGPVLANGYVRIEPCDPSGH EAGGSAGSGGGLTITPIDHPHGAVPPGAPSGFYGDTFLTSDLGSITDGVLSILGRADDVF ISGGVNVSPLRVENVALRELEPLGVAEVVLTSLPDPEFGERAVLLIAGSSSVFAQLSHTQ LSARVKSLLAGTGLGPAELPHRTWMVDQIPLKGIGKPDRRAARDLAQALATGRVD >gi|294971872|gb|ADNU01000026.1| GENE 7 4823 - 5758 1071 311 aa, chain + ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 3 311 12 297 298 224 48.0 1e-58 MATFGQWVEGARLRTLSLAFAPVFAGAGAAIGAAGGVSELIIGSPLPTASPQPRYLHVIV CSVLALIVALALQIGSNFANDYSDGVRGTDDVRVGPTRLTASGLVAPHKVKRAAMLSFAT AGVAGLALTVVAQAWWFIPVGVLAVLAAWFYTGGSHPYGYYAMGEVFVFIFFGLVATVGT GYAIAGAMTLPMWAAAVGVGLFACAVLMVNNLRDIPTDTQAGKTTLAVVLGDRRARVGYA VMVSVPYALLLVPVFAGHMAALIAVISFALVISPLRTVLGGRTGTDLIPCIKSTGLAALT YGALLGLGLAL >gi|294971872|gb|ADNU01000026.1| GENE 8 5801 - 6085 385 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395270|ref|ZP_06805475.1| ## NR: gi|295395270|ref|ZP_06805475.1| C4-dicarboxylate transporter [Brevibacterium mcbrellneri ATCC 49030] C4-dicarboxylate transporter [Brevibacterium mcbrellneri ATCC 49030] # 1 94 1 94 94 145 100.0 1e-33 MRDYVLYLLARLAVLVIVVALTIWIFGFNLIAMVAAILISAFLSYLMLAGLRMRATDGLI ERNKNRKARAPKVKKVKKDSDEAIEDAQIDGSQE >gi|294971872|gb|ADNU01000026.1| GENE 9 6151 - 6492 333 113 aa, chain + ## HITS:1 COG:no KEGG:Lxx01480 NR:ns ## KEGG: Lxx01480 # Name: not_defined # Def: membrane protein # Organism: L.xyli # Pathway: not_defined # 1 94 1 95 118 73 41.0 2e-12 MSRILLSVIVIYVAVALYSVFDAAVRDKDQIRIMPKVAWIAVIILVPLVGLLLWFLFGRG TTNNAPTRGVAPDDDPEYLRKISEDLDWERRKKQGRDNPDEPGEPGGKPHSEE >gi|294971872|gb|ADNU01000026.1| GENE 10 6495 - 7019 395 174 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395272|ref|ZP_06805477.1| ## NR: gi|295395272|ref|ZP_06805477.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 30 174 1 145 145 280 100.0 2e-74 MEHSPHVRYEVRVRESLSQNLQVSRFFNLMLLWTGAVTFGVLGIFIVWVTFATEPESREW MESGIACLVLFSFSALAIFAARMKRRIFAGPLESGVHFTVTDTTVEFPKIGRIRAAESWP LKQTQISLKRGRFGTLTLECPGHRRRAYGQGVLRDPVEEVYATITAQIERAQTI >gi|294971872|gb|ADNU01000026.1| GENE 11 7012 - 8076 978 354 aa, chain - ## HITS:1 COG:STM4290 KEGG:ns NR:ns ## COG: STM4290 COG0477 # Protein_GI_number: 16767540 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 337 106 448 500 266 41.0 4e-71 MAGATFLIGVLPTHETIGVLAPILLVILRAVQGFSSGGEYGGAATMMAEYAPRNRRGFWG SFLEFGTLAGFALGSLIVLLGELTIGNEAMMEWGWRVPFLIAGPLGIVGLYLRSRLGESP VFEEMDEKSADEGSTGKVFGSLFKDHWQQMLIMTGLVTAVNVVNYTLLSYMPTYFEKSVE LSSQTTLTIMFLAQFGMMLLMPVGGLLSDKFGRKPMWAFSMIGLIVASVPMYLIMPNGFG FALLGIFVLGVLYIPQLSSISATFPAMFPTQVRYAGFAITYNVATATFGGTAPSVNEWLI GKTGSPLVPAFYMMGACVIGLIATLCMKETAGATIRGNQLPEVGVEAKFEADAK >gi|294971872|gb|ADNU01000026.1| GENE 12 8079 - 8354 199 91 aa, chain - ## HITS:1 COG:AGl1071 KEGG:ns NR:ns ## COG: AGl1071 COG0477 # Protein_GI_number: 15890656 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 88 33 110 516 84 52.0 4e-17 MTQPQLKEPDTSTVRKAVAASAIGNATEWFDYGIYAVSVTYITQHFFPGEYGTILALATF AFSFLVRPLGGIFWGPMGDRLGRKHVLASPS >gi|294971872|gb|ADNU01000026.1| GENE 13 8567 - 9589 1102 340 aa, chain - ## HITS:1 COG:ML2409 KEGG:ns NR:ns ## COG: ML2409 COG0755 # Protein_GI_number: 15828295 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Mycobacterium leprae # 88 340 76 327 327 163 38.0 5e-40 MDVSVVWASWSNLLIYSAMAVYAIAFIIYSLDLFSDSASTKSQVKSQAKTSAKTGAVART SRNRGGVAVAERDEDPPVPVSGTGNFRRWARVGTALTVLAVLMHVGAVVTRTIAVMRVPW GNMMEYALVASALAVITYLAVLKFKDLRYMGTFVAGFALITLGLCITVFYTPAAQLIPAL QSYWIYIHVPIAILSTALLTVSAIIAIFQLLTLNYEKRIKEGRPIPKALRFLARVPSSDR IEIVSYRLAAVGFITWTFTLIAGAIWAEVAWGRPWGWDTKEIWTFVVWVIYAAYLHARAT RGWSQRAIAVLNLVGFSTVLFNFAVVNIYFNGLHSYSGLE >gi|294971872|gb|ADNU01000026.1| GENE 14 9589 - 11085 1236 498 aa, chain - ## HITS:1 COG:Cgl0436 KEGG:ns NR:ns ## COG: Cgl0436 COG1333 # Protein_GI_number: 19551686 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Corynebacterium glutamicum # 3 472 10 507 541 265 38.0 1e-70 MLRWAWRQLTTMRFALILLLVLAMAAVPGSLLPQRIQDPGKVRTFIEDNGTLGEGLDKLQ MFDVYSSIWFSAVYILLMVSLVGCIVPRCGQHYKAMRKAPPKAPRRLARMPAHQEWELAG TDSEELLDRAQRALKKAGYRTVRNDDHVAAERGYLRETGNLLFHFSILWVVVVFALGALV SYSGQRILVEGDTFSNSLVSYDDFKPGTYYNPDNLDDFRITLNRFDATFDSESVGPQFAQ PRHFAANVTTNYQGVEENKVLQVNDPVRFGRTSVYLTGNGYAPEVTVKNANGDVTFSGPV VFLPVDGTYASRGVVKVPDTGGEQLGFGGVFLPTAGFNEQGELISTFPAADQPYLVMSVY AGDLGLDDGVAQNVYELDTSKMRAVTDNEGKPVTLQMAPGETVDLPEGLGTVTFDGVKRF VAVDVHSNPTQGVLLVGAVLLMVGLGLSLFIPRRRMWVRVTDGRVEVAALARGEDPRVQH AVQALAVHLNESAREEED >gi|294971872|gb|ADNU01000026.1| GENE 15 11130 - 11309 157 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395277|ref|ZP_06805482.1| ## NR: gi|295395277|ref|ZP_06805482.1| cytochrome c biogenesis membrane protein [Brevibacterium mcbrellneri ATCC 49030] cytochrome c biogenesis membrane protein [Brevibacterium mcbrellneri ATCC 49030] # 1 59 1 59 59 89 100.0 8e-17 AFLIHKGMGKLEWVRRHQRAIVRAGGIMLIVLGLAMVTGLWNLMMSYMQLWANRFELVV Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:20:30 2011 Seq name: gi|294971829|gb|ADNU01000027.1| Brevibacterium mcbrellneri ATCC 49030 contig00029, whole genome shotgun sequence Length of sequence - 48708 bp Number of predicted genes - 43, with homology - 42 Number of transcription units - 17, operones - 7 average op.length - 4.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 913 849 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 2 1 Op 2 . - CDS 924 - 1571 542 ## COG0328 Ribonuclease HI 3 2 Op 1 . + CDS 1623 - 2498 642 ## COG2321 Predicted metalloprotease 4 2 Op 2 . + CDS 2533 - 3384 590 ## COG0388 Predicted amidohydrolase 5 3 Op 1 4/0.000 - CDS 3428 - 3763 450 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 6 3 Op 2 19/0.000 - CDS 3804 - 4250 397 ## COG0822 NifU homolog involved in Fe-S cluster formation 7 3 Op 3 4/0.000 - CDS 4244 - 5488 877 ## COG0520 Selenocysteine lyase 8 3 Op 4 . - CDS 5488 - 6237 965 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 9 3 Op 5 . - CDS 6253 - 6555 212 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 10 3 Op 6 12/0.000 - CDS 6552 - 7691 964 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 11 3 Op 7 3/0.000 - CDS 7712 - 9148 1516 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 12 3 Op 8 . - CDS 9145 - 9870 499 ## COG2345 Predicted transcriptional regulator - Prom 9908 - 9967 2.4 + Prom 9879 - 9938 4.0 13 4 Op 1 45/0.000 + CDS 9991 - 10911 337 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 14 4 Op 2 3/0.000 + CDS 10908 - 11675 701 ## COG0842 ABC-type multidrug transport system, permease component 15 4 Op 3 . + CDS 11677 - 12618 745 ## COG1612 Uncharacterized protein required for cytochrome oxidase assembly 16 4 Op 4 35/0.000 + CDS 12628 - 14352 229 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 17 4 Op 5 . + CDS 14349 - 16133 200 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 18 5 Tu 1 . - CDS 16130 - 17122 802 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) 19 6 Op 1 13/0.000 + CDS 17293 - 19371 1872 ## COG0021 Transketolase 20 6 Op 2 . + CDS 19401 - 20525 1286 ## COG0176 Transaldolase 21 6 Op 3 . + CDS 20522 - 22042 1309 ## COG0166 Glucose-6-phosphate isomerase 22 7 Op 1 . - CDS 22085 - 22330 369 ## Xcel_1551 preprotein translocase subunit SecG 23 7 Op 2 13/0.000 - CDS 22356 - 23135 752 ## COG0149 Triosephosphate isomerase 24 7 Op 3 26/0.000 - CDS 23162 - 24382 1399 ## COG0126 3-phosphoglycerate kinase 25 7 Op 4 1/0.154 - CDS 24383 - 25390 950 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 26 7 Op 5 12/0.000 - CDS 25466 - 26449 785 ## COG1481 Uncharacterized protein conserved in bacteria 27 7 Op 6 12/0.000 - CDS 26461 - 27417 798 ## COG0391 Uncharacterized conserved protein 28 7 Op 7 5/0.000 - CDS 27466 - 28359 829 ## COG1660 Predicted P-loop-containing kinase 29 7 Op 8 1/0.154 - CDS 28352 - 30265 1440 ## COG0322 Nuclease subunit of the excinuclease complex 30 7 Op 9 . - CDS 30265 - 33132 2346 ## COG0178 Excinuclease ATPase subunit 31 7 Op 10 . - CDS 33189 - 35693 2281 ## COG4581 Superfamily II RNA helicase 32 8 Tu 1 . + CDS 35750 - 36040 368 ## COG2350 Uncharacterized protein conserved in bacteria 33 9 Tu 1 . - CDS 36052 - 37044 1307 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 34 10 Tu 1 . - CDS 37181 - 39310 2476 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 39344 - 39403 2.0 35 11 Tu 1 . + CDS 39392 - 39823 499 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 39919 - 39953 0.1 - Term 39539 - 39574 3.0 36 12 Op 1 . - CDS 39812 - 40420 609 ## COG0237 Dephospho-CoA kinase 37 12 Op 2 . - CDS 40439 - 42208 1261 ## Psed_0196 hypothetical protein - Term 42246 - 42283 9.2 38 12 Op 3 . - CDS 42299 - 43765 2270 ## PROTEIN SUPPORTED gi|62426311|ref|ZP_00381439.1| COG0539: Ribosomal protein S1 - Prom 43895 - 43954 4.2 + Prom 43860 - 43919 1.9 39 13 Tu 1 . + CDS 43983 - 44816 644 ## COG0500 SAM-dependent methyltransferases 40 14 Tu 1 . - CDS 44845 - 47319 2616 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 41 15 Tu 1 . + CDS 47479 - 47919 491 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Term 47851 - 47899 0.1 42 16 Tu 1 . - CDS 47931 - 48542 671 ## COG3707 Response regulator with putative antiterminator output domain - Prom 48644 - 48703 80.3 43 17 Tu 1 . + CDS 48454 - 48633 154 ## + TRNA 48621 - 48702 72.1 # Leu CAA 0 0 Predicted protein(s) >gi|294971829|gb|ADNU01000027.1| GENE 1 1 - 913 849 304 aa, chain - ## HITS:1 COG:ML1816 KEGG:ns NR:ns ## COG: ML1816 COG0488 # Protein_GI_number: 15827973 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium leprae # 3 304 12 326 545 301 53.0 2e-81 MVGSRTLMSEVNFRVDKGDRVGLVGRNGAGKTTLTKVLMSEVLPSEGTVSVSGSVGYLPQ DPRSGRPTETAKERVLGARDLDVIARRMRKAERAMSDPDPDVAAKAIDKYPRIEAEFIAA GGYAAESEALAIAANLGLDEQLMGQELQTLSGGQRRRVELARILFHQPDTMILDEPTNHL DAESVQWLRDYLAKYSGGLIIISHDLNLIEEVVNKVFYLDATRQVIDIYAMGYKQYLKQR EADERRRKRERANAEKKASALVAQAEKMRAKATKAVAAQSMLKRAERMMAGLEEERQSDK VANL >gi|294971829|gb|ADNU01000027.1| GENE 2 924 - 1571 542 215 aa, chain - ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 2 141 5 141 155 95 39.0 6e-20 MLEVACDGSALGNPGPAGWAWVIDDERWAAGGWEESTNNRAELQAVIEILKATAHTHEDI LILADSKYVINSVTKWMPVWRLKGWKKANGQDVLNRDLMEELWEQVDALEKSGRTLKFQW VKGHSNHELNETADQRARAVATAIRDKTEPHLGPGLGTEKKTEVTGEDTVNVWCPLDKTL ADEIVERAKVLGLTPHALLAQVIETGWKEHRDSGK >gi|294971829|gb|ADNU01000027.1| GENE 3 1623 - 2498 642 291 aa, chain + ## HITS:1 COG:MT2651 KEGG:ns NR:ns ## COG: MT2651 COG2321 # Protein_GI_number: 15842113 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Mycobacterium tuberculosis CDC1551 # 43 286 47 287 293 225 50.0 9e-59 MTFNPNSQLDSSQVSRGRGKPVMIGGGIGGVALLVLGLIFFGPEAVLNQLGSGEQSQQTQ DDLAEKCRTGADANRDVECRIVGTVNSLNDYWPTGTRELGKQYRNPSVELTSGTWSTGCG QGNSNMGPFYCPADETAYFDTSFFELMRQQLGAKEGPLPEEYVVAHEFGHHIQKITGDIN RTRDGKTGPQSNAVRLELQADCYAGVWAANATKTHGPQGQPYLEPLKDSDIEAALGTAEA IGDDHIQETSGGRVTPENFTHGSAEQRMTWFKRGYDSGSPTRCNTFDVDRV >gi|294971829|gb|ADNU01000027.1| GENE 4 2533 - 3384 590 283 aa, chain + ## HITS:1 COG:YIL164c KEGG:ns NR:ns ## COG: YIL164c COG0388 # Protein_GI_number: 6322027 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Saccharomyces cerevisiae # 18 168 43 197 199 195 58.0 7e-50 MTREIGEVQRQELQSSKPEVFIGGYPKGLAFGAYVGFRTEKGRAEYARYVAGSVDLEGEE IARLTEAASAHSINVVIGIIERAGNTLYCTALMIDPQNGVVGKHRKLMPTGSERLIWGFG DGSTLDTMDTPAGRTGAVICWENYMPLLRQAMYSKGVEVYCAPTVDDRDTWVSTMTHIAL EGRVHVLSACQYITTDQFPDDYVLDHELPGGDVAIRGGSLIIDPTGKLLAGPVFNEETIL YADIDPVAKTRGHLDFDSVGHYSRPDVFKLRVDTSPQHSVNFE >gi|294971829|gb|ADNU01000027.1| GENE 5 3428 - 3763 450 111 aa, chain - ## HITS:1 COG:MT1513 KEGG:ns NR:ns ## COG: MT1513 COG2151 # Protein_GI_number: 15840926 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 8 111 7 115 115 125 65.0 2e-29 MTEVVDQPTNATPEEVIDALMDVMDPELGVNIVDLGLVYGATVDEDGVAIIEMTLTSAAC PLTDVIEDQCAQALDGIVPAFRINWVWMPPWGPEKITEDGREQMRALGFNI >gi|294971829|gb|ADNU01000027.1| GENE 6 3804 - 4250 397 148 aa, chain - ## HITS:1 COG:ML0597 KEGG:ns NR:ns ## COG: ML0597 COG0822 # Protein_GI_number: 15827243 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Mycobacterium leprae # 1 147 2 148 165 122 48.0 2e-28 MVNLDQLYQQVILDHSKQRHGNVPFDDREALGRSHQVNPMCGDEITAEVVAGDDGKFEVR WEGDGCSISMASASVACEIYDDEGREAFDRAEAEFHELMHSRGTVEADEDVLFDAAAFAG VSKFPARIKCALLAWIAVKDALSQAESK >gi|294971829|gb|ADNU01000027.1| GENE 7 4244 - 5488 877 414 aa, chain - ## HITS:1 COG:Cgl1524 KEGG:ns NR:ns ## COG: Cgl1524 COG0520 # Protein_GI_number: 19552774 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Corynebacterium glutamicum # 8 413 15 421 421 440 55.0 1e-123 MTTQEFTRLRSDFPLLKREVAGSPLAYLDSGATSQKPECVIDAEQEFNTRHNSAVHRGAH TLATEATDAFENARAKVAAFVGAKPSQVSWVKNATEALNIVAMGMGFATEGPYALGPGDS IVITQMEHHANLVPWQQVALRTGAELRYIPITDEGTLDLSDLDSIADASTKVMAFTHVSN VLATVNPVEQLVEHAKKIGAVTVLDACQSVPHMQVDFSALDVDFAAFSGHKMLGPSGIGL LYGKQDALNALPPVLTGGSMIETVTMEESTFLPAPQRFEAGTQPVAQAVGLGAAADYLSH VGMDRIAEHEHELAQLLVEGVTKIPGVTLLGPVSRSVSTVAVDVEGVHAHDVGQFLDADG VAVRVGHHCAMPLHARLGVRASTRASAYVYSTVEECERFLDSLARVRGYFGVEW >gi|294971829|gb|ADNU01000027.1| GENE 8 5488 - 6237 965 249 aa, chain - ## HITS:1 COG:MT1510 KEGG:ns NR:ns ## COG: MT1510 COG0396 # Protein_GI_number: 15840923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Mycobacterium tuberculosis CDC1551 # 1 247 1 250 266 343 67.0 1e-94 MSTLSIRDLKVSVETDKGSKQILKGLNLELKSNETHAIMGPNGSGKSTLAYAIAGHPAYH IDGGSVTLDGEEILDLSVDERARAGLFLAMQYPVEVPGVTVTNFLRSAKTAIDGEAPKLR TWAKELNQAMSELKVDPEFASRNVNEGFSGGEKKRHEILQMELLKPRFAILDETDSGLDV DALRIVSEGVNRAQSNTDVGVLLITHYTRILQYIKPDFVHVLVDGRVAEEGGPELANQLE AEGYDRFQK >gi|294971829|gb|ADNU01000027.1| GENE 9 6253 - 6555 212 100 aa, chain - ## HITS:1 COG:ECs3406 KEGG:ns NR:ns ## COG: ECs3406 COG2146 # Protein_GI_number: 15832660 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Escherichia coli O157:H7 # 9 100 11 101 106 58 38.0 3e-09 MKSVAKSTDVTPGSAIRVKVDGIDVCVARTESGELHAIDDLCTHGEVSLSEGDVMGCAIE CWLHGSTFDLRTGEPQNPPAFDPVAVYECTERDGEIYVKL >gi|294971829|gb|ADNU01000027.1| GENE 10 6552 - 7691 964 379 aa, chain - ## HITS:1 COG:ML0594 KEGG:ns NR:ns ## COG: ML0594 COG0719 # Protein_GI_number: 15827240 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Mycobacterium leprae # 19 375 20 383 392 310 47.0 3e-84 MTIATEHVPAKSRSERTRSFNVADFPQVNGREEEWRFTPVKQLSQLLSDEESGAELSVTR ELPTGVDVSQISLDEARELGVPSPEDLPAVIAANRASSVTRYDIGEGVELESPAFITTEG ASNENPVHNHTVVTVGAHASATIVIKHTGHAQLSELLSVIVGPGARVKLVTLQLWDDEAV HLGQHDAVVGKDAQFTHIAITLGGKIVRLNSNVSYDGPGGEAQMLGLYFADAGQHLEHRT YVDHNTPNATSDVLYKGALQGKDARSVWIGDVLIRPEANGIDTYELNRNLVLTEGARADS VPNLEIETGEIEGAGHASSTGRFDEEHLFYLMSRGIDEKTARRLVVRGFFNEVIQKIDIE QIEEVLTEQIEEELSRSVL >gi|294971829|gb|ADNU01000027.1| GENE 11 7712 - 9148 1516 478 aa, chain - ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 17 478 20 481 481 785 82.0 0 MTDTTESNPILEMNPELKDIGNYAYGWHDTTDAGADAKRGLNEDVVRNISALKEEPEWML ERRLRALKLFEKKPMPHWGADLSGINFDDIKYFVRSTEGQAQSWEDLPEDIKNTYDRLGI PEAEKQRLVAGVAAQYESEVVYHKINEELERQGVIFLDTDTGLKEHPEIFEEYFGTVIPS GDNKFAALNTAVWSGGSFIYVPKGVHVEIPLQAYFRINTENMGQFERTLIIADEGSYVHY VEGCTAPIYKSDSLHSAVVEIIAKKDARVRYTTIQNWSNNVYNLVTKRAIAEEGATMEWV DGNIGSKVTMKYPAIWLTGEHAKGETLSVAFAGNGQHQDTGAKMVHAAPHTQSSIVSKSV ARNGGRAGYRGLVHVHPGAKGSSNTVLCDALLVDNISRSDTYPYIDIREDDVALGHEATV SKVSEDQLFYLMSRGLDETEAMAMIVRGFVEPIARELPMEYALELNRLIELQMEGAVG >gi|294971829|gb|ADNU01000027.1| GENE 12 9145 - 9870 499 241 aa, chain - ## HITS:1 COG:ML0592 KEGG:ns NR:ns ## COG: ML0592 COG2345 # Protein_GI_number: 15827238 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 8 217 39 246 254 140 40.0 2e-33 MTARPGQDLRTRQQVLAIVLDQGPISASGIARMVDLTPAAVRRHLDALEKENAIEVRELA GVKVGRGRPARHYVVTSAGHAQISHAYDQVAVEALDFVSSELGREAVERFARTRAQELRE KLEARVEEGGSVSTRSRGLAAALDKEGYAASATPVAVGTPLEAMQLCQGHCPIQHVAEEY PEFCEAELEQFGEILGVDVRRLSTLASGAHVCTTHIPTSTLNRPLLGSQDGKSNPKKGGE R >gi|294971829|gb|ADNU01000027.1| GENE 13 9991 - 10911 337 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 8 299 12 307 318 134 30 1e-30 MTNPNHPLELDAVSVSFGNVRAVDNVSLTVERGTVHSLLGPNGAGKSTTIAASVGLLKPT SGYVRIFGYDPVKDHTYSSALAGVMLQDGGLPMASKPLSILKNLSRMYADPADYHELAER LGITAFADRTIRRMSGGQKQRVGMAAALIGKPQLVFLDEPTAGLDPQSRLAVFAIVEELR EQGVAVVLTTHDMDDAASLSDYVTIIDKGRVISHGTVAELTGDGSSTLTVRAEQLNEQLI TQFRAYGDVDIAKDGTVTITGDFTTQKVHSITGLLNDADTHITSLSLASRSLDDVFLDLT GRTLRS >gi|294971829|gb|ADNU01000027.1| GENE 14 10908 - 11675 701 255 aa, chain + ## HITS:1 COG:ML0589 KEGG:ns NR:ns ## COG: ML0589 COG0842 # Protein_GI_number: 15827235 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Mycobacterium leprae # 4 252 22 264 265 86 34.0 4e-17 MTTPQIAPLAQRVWAQSLFELRTTLSNAEQLFLSFALPIGALVVLATTDVVTVFGYSEDQ RNIIAASAGLGLSIAASAFTGQAIATGFDRRYGVLRQLATTPLGSTGLILAKIVSVYIVT AVQLLVMFIVIAVLPVNFEITVSLPQLLGIFLSWFLGTAALTSLALAFAGTARAEAVLAG SNILWVAGAGVGGLVVKHPGLWGTIASLTPFGAMGDSLRTALVSGGVDWSAQLVLLVWAV LGIIAGATWFSFESK >gi|294971829|gb|ADNU01000027.1| GENE 15 11677 - 12618 745 313 aa, chain + ## HITS:1 COG:Cgl1532 KEGG:ns NR:ns ## COG: Cgl1532 COG1612 # Protein_GI_number: 19552782 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein required for cytochrome oxidase assembly # Organism: Corynebacterium glutamicum # 18 282 30 300 346 97 31.0 3e-20 MSKSSWQATEVNRYVYWLAVGLLLLQALIVFTGAAVRLTGSGLGCPNWPMCTDSSLTNTP EMGIHGFIEFGNRVLGVVLGLYSLFVVIALWSLRSTRSDLFRMAVLLFAVVPFQAILGGV TVRTQLNPWIVAAHFIPSALAVALSAYMVKRTRDTGANPRPIASRTLVTVAWAVGILCAI VVAMGVLVTGAGPHAGDEISARNGLNTLLMSRLHAIPVWLMTAGTIYGLVLARKEKLASA TRAFTFLLIVEVAQGIIGYTQFFTGLPVPLVMAHIAGLCLVITAAVFVVDSVYQRDPLPT SASRNAQPETTSA >gi|294971829|gb|ADNU01000027.1| GENE 16 12628 - 14352 229 574 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 298 550 104 347 398 92 29 3e-18 MLFTIFKRYVSAYPVGLILILIFTLAQVMGSLLLPALNARVIDDGIAQGNLTLVWQLGGV MLIVALAQLATAVIEVAAGSYVSMSVARDIRRDFFAKVMTFGHQEAQTFGVSSLITRSTN DVRQVQQFLTMAMTMMVMAPVMAFGGLIMAFAQDLTLSWVIVVTVVILAIVMALAVRGMV PSFQVMQRRIDAMGSVLSQQLSGTRVIRAFVKEDVEKKRFAQTNRDMTRASLIVGRYFVA LYPIVFILINVGTAAVVWFGAHGVEAGTSQVGTVVAFIQYLMLIMMGVLMFSFMSMMVPR AEVAAGRLVDVMDTQVHLDRDSGRVDELPSPGTFEFRDVTFSYPGAERPVVQEVSFSAEV GSTVAVIAATGSGKTTLAKLLVRLLEPTSGTVFVGGVPIQDISRDTLGTQFGYVAQNPYV FGATVAQNLRLGNPATSDEELWEALHIAQADDFVRELDGQLDFEINQGGKNLSGGQRQRI AIAMALARRAPVLVFDDSFSALDTATDLRLRQALSNVAATSLIITQRISSARTADTIVVL DRGRVVAQGTHENLMETSPVYREIAESQATQEAL >gi|294971829|gb|ADNU01000027.1| GENE 17 14349 - 16133 200 594 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 355 593 279 525 563 81 28 8e-15 MSEEQEPHEKAQNFWKTVATLTREFRYERVPMILGFVGIMVGTCLTIAGPYVLGLATDTV FDGFTSDTGIDFGLLARLLLIVVVLYLIAESFTFAGGWLFNEAIQRVLYALRERVENKVH RLPLRFLDSQKRGDLLSKLNNDLDNINTALNQNMETIVTSIITVVGVLCVMFWISWELTL VALATIPLTAVVMAILGVRSQAQFRIQWSETGKLNAHIEESISGHELLAIYNATPQAAET FARSNTEVYNASRKAQFLSGSMMPAMMFVSNLVFVGIAIVGALRVASGAMTLGSVQAFIQ YSRQFSQPLAQLGGVASQLQSAAASAERVYELLNQPEEVADTGRYPDFALTHGKVEFRSV DFSYDPEQPFIRDLNLTVDGGQTVAIVGHTGSGKTTLVNLLLRFYDVTGGAIYLDGVDIR DIDRHQLRSPIGMVLQDTWLFGGTIYDNIAYGREDATREDVMAAAEAAYVDRFVTHLPDG YETVIDESGGNVSAGERQLITIARAFVSNPDILVLDEATSSVDTRTEVLVQEAMNRLRSG RTSFVIAHRLSTIRNADLIVVMEAGRIVESGTHEELLARGGKYADLHAASVGEA >gi|294971829|gb|ADNU01000027.1| GENE 18 16130 - 17122 802 330 aa, chain - ## HITS:1 COG:ML0584 KEGG:ns NR:ns ## COG: ML0584 COG0109 # Protein_GI_number: 15827232 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Mycobacterium leprae # 31 326 25 315 321 253 49.0 3e-67 MSSHHRDVVRTAGSEAIEEAPLQRVIDERRRGSKPRSKFRAYIALTKPRVIELLLVTTAP VMFLAQRGLPDWWLILATLVGGSAAAASASVFNCYLDRDIDAKMHRTENRPLVTGEVTPR EALVFAFALGIGSIFWMGGFTNWVAAGLTAIAILLYVVFYTIMLKRHTTQNIVWGGAAGC MPVLIGWSAVTGSLALEPFILFLVVFFWTPPHYWPLAIKYKRDYDAAGVPMLPSKVPPAS VGKQIILYAWAMVLSSLALIPLAPMGPLYISVAVLAGAWFLYECYTFVRRAKQGLSGTRL RAMKVFHGSITYLSVLFLAVAIDPFLNPFV >gi|294971829|gb|ADNU01000027.1| GENE 19 17293 - 19371 1872 692 aa, chain + ## HITS:1 COG:Cgl1536 KEGG:ns NR:ns ## COG: Cgl1536 COG0021 # Protein_GI_number: 19552786 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Corynebacterium glutamicum # 5 686 21 698 700 818 63.0 0 MSSLNWSDTDRLAVDTARLLAADAVQNAGHGHPGTAMSLAPVAYYLYQNALTHDPSDPHW LGRDRFVLSAGHSSLTQYIQLFLSGYGLELDDLKALRTWGSLTPGHPEVGHTDGVEITTG PLGSGLASAVGMAMASRRERGLLDPDTAPGESVFDHFIYVVAGDGDMQEGVSGEASSLAG TQRLNNLIVIWDDNRISIEDNTSIAFTEDVTARYDAYGWHTQHVSFLDENGGYTEDIDAL HSAIEAAKKDPRPSFIRLSTIIAWPAPNKQNTGASHGAALGDEEIRATKEILNFPADETF VVAPEVLEHTRPVVDRGRAAHEEWNTRFEAWRTDSPERAQLLDRLTARELPAGLEDVLPT FEASDKGVATRAASGQVLNAIAPLMPELWGGSADLAGSNNTLVKGEPSFFPKDRSSTAFD GNEYGRNLHFGVREFAAGLACNGMALHGLTRPYNGTFLVFSDYMRPAVRLAALQELPVIF VWTHDSIGLGEDGPTHQPVEHLSSLRAIPGLDVVRPADANETAVCWLEMLRRTDGPTGLV LTRQAVPVLDRTELAAASGAAQGAYVLSDEEDFDVVLMASGSEVAIALDAAQQLRAQGTR VRVVSMPSHEWFDKQDEQYKESVLPVTARARVSIEAGTAMSWHRYVGTEGRCISLEHFGA SADYQTLYREFGITPGAVVQAAHESIAAVQAL >gi|294971829|gb|ADNU01000027.1| GENE 20 19401 - 20525 1286 374 aa, chain + ## HITS:1 COG:Rv1448c KEGG:ns NR:ns ## COG: Rv1448c COG0176 # Protein_GI_number: 15608586 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Mycobacterium tuberculosis H37Rv # 1 373 1 371 373 376 55.0 1e-104 MATPVPSLQALSHAGVSVWLDDLSRTRITSGSLNDAIETMSVVGVTTNPTIFAAALAGDG YDEAVAELAAKGVSVDEAIDVLTTQDVAEACDILLPVYQATGGEDGRVSIEVPPHLAHDT EGTVEYAKKLHAMVDRDGVMIKIPATEEGLLAITRVIAEGISVNVTLIFSLDRYRKVVEA YVNGLERAREQGHDISSIRSVASIFVSRVDTEFDNRIDELVNSGADKELLELKGRAGLAN CHLAHRIASEIFDSERFTVLAAAGAHKQRPLWASTGTKNPQYSDTMYVDGLITADTVNTM PEKTMVAFADHGEVNGDTVFGQYEEADRILDALSVAGVHYGDVMEKLEREGLEKFDASWN ELVETVTTALEKAK >gi|294971829|gb|ADNU01000027.1| GENE 21 20522 - 22042 1309 506 aa, chain + ## HITS:1 COG:slr1349 KEGG:ns NR:ns ## COG: slr1349 COG0166 # Protein_GI_number: 16330760 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Synechocystis # 72 267 121 329 531 89 32.0 1e-17 MTTTATVMNDILENRVASRIAAQDATVWGPKAEDEASKRLGWVNLHTRAQDIIDQVIELA QTCEHDRVVLAGMGGSSLAPEVMSNAYGKDLIVCDSTHPDQVAYTAQDLDRTLVIIASKS GSTVETDSARRFFTQKFRDAGIDPSSRLIAITDPGSPLDQRAQEEGWLAVFHADPTVGGR YSALTPFGLVPAGLVGVDIAQVVADAASIAPQLEQDSEENLAVRLGALLGAAHENGHEKL ALDPHTEQFQGLGVWIEQLIAESTGKDGKGILPIAPQDCENATTVALGASDVHDADALVD LPLGAQFLLWEYVTAIASYVIGVNPFDQPNVESAKAAMRELLAGGEQTGSALPVSFTDGA LTVSGPADLVEGAQSAAEVVDRLRAVVPQGGYVGLQAFVDRIGRSDLVKLRPQFAQSLGV ATTFGFGPRYLHSTGQYHKGGHANGVFVQITDEATIDFDVPETGFTFGQLIAAQSRGDAN VLHDAGRPVIRFHVTDEDGYAQLFDL >gi|294971829|gb|ADNU01000027.1| GENE 22 22085 - 22330 369 81 aa, chain - ## HITS:1 COG:no KEGG:Xcel_1551 NR:ns ## KEGG: Xcel_1551 # Name: not_defined # Def: preprotein translocase subunit SecG # Organism: X.cellulosilytica # Pathway: Protein export [PATH:xce03060]; Bacterial secretion system [PATH:xce03070] # 1 76 1 76 80 72 64.0 7e-12 MEILTWILTGVLILTSFILIAFVLLHKGKGGGMSDMFGGGMSANLGSSGVAEKNLNMYTT LIAIVWAASIVLLGLIASFQA >gi|294971829|gb|ADNU01000027.1| GENE 23 22356 - 23135 752 259 aa, chain - ## HITS:1 COG:MT1482 KEGG:ns NR:ns ## COG: MT1482 COG0149 # Protein_GI_number: 15840896 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 3 254 2 253 261 255 55.0 5e-68 MTNRLPLLAGNWKMHHDHLEAISVVQKLAWALRDAKISKESAQVAVLVPFTDIRSVQTLV QGDKLPLWYGAQDLSEHAEGAHTGDISGRFLQQLGCEFVVVGHSERRSDHHEDNALVGRK VRAALDHELTPILCVGESLTERENGEHVAFTLRQCEEALAEIDTPEELVIAYEPVWAIGT GKTATANDAHEMAQEIRGWLAQRYDSSVAESTRILYGGSVKPENVSEIMQSEHVDGALVG GASLDPDTFARLIAASVRL >gi|294971829|gb|ADNU01000027.1| GENE 24 23162 - 24382 1399 406 aa, chain - ## HITS:1 COG:Cgl1549 KEGG:ns NR:ns ## COG: Cgl1549 COG0126 # Protein_GI_number: 19552799 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Corynebacterium glutamicum # 1 405 3 403 405 410 57.0 1e-114 MKTLDNLGEFAGKRVLVRSDLNVPMDGDTITDAGRIKASAPTIRDLAEAGARVIVMAHLG RPKGEVKPEFSLAPVVEELAKEVGRDVKFASDTVGEDARAKAEQLTDGEVLLLENLRFNP GETSKVDAERDEFAQQLASLADVFVSDGFGVVHRKQASVYDIAKKLPHYAGGLVEAEVRV SRQLLEDPQRPYTVVLGGSKVSDKLGVIESLLERADTLIIGGGMVYTFLKAQGKGVGASL LEEDQIDTVKGYLETAQNKGVTIMLPTDIVMAEKFAADAQHWTVGVDELENTPAGESALG LDIGPESAKAYAKTITESKTVFWNGPMGVFEFEAFAAGTKAVAEALSTAHGGVDQGRLTV VGGGDSAAAVRALGFSDDDFGHISTGGGASLEFLEGKELPGLTVLD >gi|294971829|gb|ADNU01000027.1| GENE 25 24383 - 25390 950 335 aa, chain - ## HITS:1 COG:Cgl1550 KEGG:ns NR:ns ## COG: Cgl1550 COG0057 # Protein_GI_number: 19552800 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 3 333 4 334 334 395 60.0 1e-110 MTRVGINGFGRIGRSFLRIVLENDLDLEVVAINDLTDNGQLAHLLKYDTVWGRFNGEVSY DDESLTVNGKRIVASAHKDPADIDWAAAGAEVVVECTGKFKKRDQAALHLGETVKKVVLS APGKGVDGMFVMGVNDNEYDPENQHIVSNASCTTNCLAPVAKVLDEFCGIESGIMTTVHA YTGGQNLVDGPHKDLRRGRAAAVNLVPTTTGAAKAVGKVLPQLDGKLDGFAVRVPVPTGS LVDLTFVPSRDVSVEEVNAAVKEATSGDLGHILEYTEDPIVSSDIVMASHSSIFDAELTR KVGNQIKVIAWYDNEWGYSERLVEMVELVAAKLEK >gi|294971829|gb|ADNU01000027.1| GENE 26 25466 - 26449 785 327 aa, chain - ## HITS:1 COG:MT1466 KEGG:ns NR:ns ## COG: MT1466 COG1481 # Protein_GI_number: 15840880 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 326 1 326 327 377 75.0 1e-104 MALTAQVKDELARFVEPRTAARKAEVSSLLRFSSALHIVAGSIVIEVELDTGVAARRLRS EIKDLYGHVAEIIVINGSGLKKGSRFMVRVGTDGVALARQAGLIDAQGRPVRGLPAAVVN GSLTDAKAAWRGAFLAHGSLTEPGRSSALEVTCPGPEAALALVGAARRLGISAKAREVRG VDRVVIRDGEAIGALLTSMGAEQTRLVWEERRLRREVRATANRLANFDDANLRRSARAAV AAGARVERALEILGDEVPEHLKYAGKLRLEHKQASLEELGQLAEPPMTKDAIAGRIRRLL ATADKKAAELGIPDTEANLTPEMLEDV >gi|294971829|gb|ADNU01000027.1| GENE 27 26461 - 27417 798 318 aa, chain - ## HITS:1 COG:MT1465 KEGG:ns NR:ns ## COG: MT1465 COG0391 # Protein_GI_number: 15840879 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 6 306 5 315 342 239 45.0 6e-63 MAGPEIVAFGGGHGLYSALRAFRLLTKNLTAVVTVADDGGSSGRLREEFDVLPPGDLRMA LAALCGDSEWGQTWRDVIQHRFVSDGPLNDHSAGNLLITALWQHLGDPVDGLDWMAQLVR AQGRVLPMSSIPLTITADVDDGYGNIEKVSGQCTVATTSGTVKQVHLEPESPPARRETLE SVTNADVLNLGPGSWYTSVMPHMLVPQLQQAIRDSDAVKILTLNLPGDTEEGRGMQMRDF VRVLHEHAPDLRIDYVLADEEAACGQTGLATTASNLFGARTWFASVESSTPGVHDSLKLA ACYRDILSDAGIPTNEQW >gi|294971829|gb|ADNU01000027.1| GENE 28 27466 - 28359 829 297 aa, chain - ## HITS:1 COG:Cgl1553 KEGG:ns NR:ns ## COG: Cgl1553 COG1660 # Protein_GI_number: 19552803 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Corynebacterium glutamicum # 12 296 24 308 309 288 50.0 9e-78 MTEQTGPILGGDFEVLVLTGMSGAGRSTAANTLEDLGWYVVDNLPPQMIIPLVELVARAD GKLPKVAVVADVRSRYTFSELENSVADYQDQGVRIKILFLDASDEVLVRRFESVRRPHPL QEDGTLIDGIDAERTLLAEIRSKSDYRIDTSDLNVHQLGAEIKRIFDTDNVSALRITVMS FGFKYGLPKDADHVVDVRFLPNPYWIPHLRSKTGEDEAVSSYVLSQPGALSFVDRYLSTL DVIIHGYLREHRSYATVAIGCTGGKHRSVAISEQLARRLADRTQARVNVRHRDLGRE >gi|294971829|gb|ADNU01000027.1| GENE 29 28352 - 30265 1440 637 aa, chain - ## HITS:1 COG:ML0562 KEGG:ns NR:ns ## COG: ML0562 COG0322 # Protein_GI_number: 15827213 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Mycobacterium leprae # 2 624 3 645 647 643 51.0 0 MDPQLYRPKTGEIPTDPGVYTFRDADGRVIYVGKAKNLRNRLNSYFADPAGLHPRTFTMV HTASSVNWTVVKTEVEALQLEWTWINEFNPRFNVMFRDDKSYPYLAITVRDEYPRVFVTR GKRKKGMKYFGPFTAVWAIRESLDLLLKAFPVRTCAKTVFDRAQRQGRPCLLGYIDKCSA PCVGKIEKDEYAELVKSVIEFMSGNSGKFISVRKQAMKEASANLDFEEAARLRDEITALE TVLNKNAVVLSQNADADVFGLYAEELEASVQVFHIRGGRIRGQRGWIIERMEDKTPGELI EDAIRQAYTDVDTHAIPTEILTSHEPADKELLGEWLRSVRGAKIDMRVPQRGEKKAVLET AELNAHKALALHKTRRASDLTTRSQALNEIHEALDLTEPPLRIECIDNSHTAGQNVVGSL VVFEDGLPKKKDYKRFSVTGDAARDDTSAMYNVVSRRFERYLENMGKDDTGFGYRPSLLV VDGALPQVHAATQALHDLGIPDITVVGLAKRLEEVWVPWDEFPVILPRNSEGLFMLQRIR DEAHRFAITYHRQKRSASMTRSELDAIDGLGAAKQKALLKHFGSVKKIKAASVEELMQAR GIGPQLADKIHGHFTQAQPDEENAGTVEEPTEGRAHD >gi|294971829|gb|ADNU01000027.1| GENE 30 30265 - 33132 2346 955 aa, chain - ## HITS:1 COG:MT1675 KEGG:ns NR:ns ## COG: MT1675 COG0178 # Protein_GI_number: 15841093 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 948 1 960 980 1337 70.0 0 MSVSKGISHLDTLLVKGARAHNLKNVDVSIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQR RYVESLSSYARMFLGQMDKPDVDLIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDFMRLL WARIGKPHCPTCGEAITRQTPQQIVDQLSALPERTKFIVMAPVVRQRKGEFTDLFQQFQQ AGFSRAVVDGETVSLTEPPTLKKQYKHDISVVVDRLIAKDGIHQRLTDSVETALATANGR VDVELVETGEKRTFSEHLSCPNEHPLTTDEIEPRTFSFNSPFGACPVCDGIGTRLHVDPQ LVVPNEDLSLAQGAIAPWSMGKTTAKYFTRLLQGLADDLGFSMDTPWKDLSKKHRTAILE GKDYQVHVKYRNRFGRERTYSTGFEGVFAYILRKHQETESEHSRARYESYMREVPCAECD GTRLKPEALHVLVGGKSIADVSNMPLDESAHFLTNMELDGRDAQIAAQVLKEIGARMRFL LDVGLEYLTLHRTAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIET LQRLRDLGNTLIVVEHDEETIETADWIVDIGPGAGEHGGEVIYSGDYKGLLKEKKSITGA YMSGAKSIEIPQARRPRDTKRIVRVEGARANNLKNISVDFPLGVFTAVTGVSGSGKSTLV NDILYTVMANELNNSKQVPGLHKRVTGLDNLDKVIHVDQSPIGRTPRSNPATYTGVFDHV RKLFAETETARIRGYQPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCKGQRY NRETLDVKFKGKSIADVLDMPIEEATEFFSAVPAIHRHLSTLAEVGLGYVRLGQPATTLS GGEAQRVKLAAELQKRSRGRTVYVLDEPTTGLHFEDIRKLLGVLQGLVNKGNTVIVIEHN LDVIASADYIIDMGPEGGRGGGTVVATGTPEEVAGVEASHTGRFLANMSAIRERL >gi|294971829|gb|ADNU01000027.1| GENE 31 33189 - 35693 2281 834 aa, chain - ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 1 821 11 840 850 790 50.0 0 MPHLYRVPEEFADSDTLFETFVEYTKDTGITLYPAQEEAILAILTGDNTVMATPTGSGKS MVALAAAFFALCRGQRTYYTAPIKALVSEKFFDLTHIFGADNVGMVTGDSTVNADAPIIC ATAEILANQALREGATLDVGMIVMDEFHYYGDPQRGWAWQVPLLTLPAAQFVLMSATLGD TSAIQKSLTELTGRDCSLITSAHRPVPLSYAYSEEPLHETLSKLVRDNKAPIYVVSFAQA AAVELASSVVNANLATREQREEIAEEIRGFGFSKGFGVTLKRMLLAGVGVHHAGMLPKYR RLVEHLASSGKLSVISGTDTLGVGINVPIRTVVLTGLTKFDGFRQRRLRVREFQQIVGRA GRAGFDTEGFVVAQAPEHVIENKKALLKAGDDPKKRRKVVKKQAPEGFVNWSETTFNHLV EGKPEELKSRMRITHSTVINLLSRPHASVDTVKDFIDSSHDENTLDMYLRALRIGRNLLD ASVIERRVVGDRVEYAPVNDLGPQFALNQPLSPFALAALELFDPESDTYATDVLSVIEAT TEVSYAVLKGQLNRIKREELAALKADGVDYAERMEILDEITYPQPNGEVLEEAFDAFTHS APWLREIGITPKAVVADMVEHSMNFSQFVNYYGLARVEGGLLRYLTDVYRSLVQNVPHDL RNEELTAIIEWLGATVMRVDSSLVEEWEALKNAGDEAEVLPALDMSRTFSADTQAFTRAV RNAMFHRVILAERAAYDALGDLDGESGWTQKKWEDAIEDFYDEYGDLGVSNDSRGPKFFN ILDKEDEAWTVRQILDDPEGDMDWAITARVDLPASDEAGEVVVEILDVGPLTGN >gi|294971829|gb|ADNU01000027.1| GENE 32 35750 - 36040 368 96 aa, chain + ## HITS:1 COG:Cgl1920 KEGG:ns NR:ns ## COG: Cgl1920 COG2350 # Protein_GI_number: 19553170 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 93 1 95 95 58 33.0 3e-09 MATFAVVYEYGPDTETRMNARPEHRAWQKRLNEAGVLLASGPLESEDQPGGLLIFRADDQ ANVEDLLAQDPYAEIGVIASTQVRPWNPVFGPFAEA >gi|294971829|gb|ADNU01000027.1| GENE 33 36052 - 37044 1307 330 aa, chain - ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 13 316 11 331 369 271 48.0 1e-72 MSTALPLWFEVGSLIVLVLLLIFDLLIILKRPHIPSMKEATGWVVFYVTLALIFAGLMFA IGDTDHGVEFLAGWLTEYSLSIDNLFVFVIILSKFSVPKKYQQEVLMVGIIVALIFRGAF ILAGAWIIEMFVGVFYIFGIFLLYTAFKQAFGDEEESDEDTGFVKFLKKRINYTDEYDGN KLRTTVDGVKHWTPMLLVFLAIGTTDIMFALDSIPAIFGITKSPFIVFTANLFALMGLRQ LYFLLGGLLDRLEYLKYGIAAILAFIGVKLILHAMHETWFPGVPEINTWVSLGFIVCAML IATIASLIKARRTPDRITFGSMRHHEDDHS >gi|294971829|gb|ADNU01000027.1| GENE 34 37181 - 39310 2476 709 aa, chain - ## HITS:1 COG:MT1669 KEGG:ns NR:ns ## COG: MT1669 COG0556 # Protein_GI_number: 15841088 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Mycobacterium tuberculosis CDC1551 # 21 705 40 733 739 937 71.0 0 MSTEPSTPANIPVPAIGHRPDVQRRVAPFEVVSEYSPSGDQPTAIAEIARRLDDGEKDVV LLGATGTGKSATTAWLIEKVQRPTLIMAPNKTLAAQLANEFRQLLPHNAVEYFVSYYDYY QPEAYVPQTDTFIEKDSSINDEVERLRHSATNSLLTRRDVVVVSTVSCIYGLGTPEEYVD RMVSLEVGEEVDRDELLKRFVEMQYTRNDMAFTRGTFRVRGDTVEIIPQYEELAIRIEFF GDEIEALHTLHPLTGEVIRDEDIVHIFPASHYVAGENRMGKAIAAIEDELQVRLAELEKQ NKLLEAQRLKMRTTYDLEMMQSMGFTSGIENYSRHIDGRAAGTAPNCLLDYFPEDFLLVI DESHVTVPQIGGMYEGDMSRKRTLVEHGFRLPSALDNRPLKFDEFLQRIGQTVYLSATPG DFELERSRGVVEQIIRPTGLVDPKVTVKPTRGQIDDLLGEIRDRIEKNERVLVTTLTKKM AEDLTDYLLEHDIKVQYLHSDVDTLKRVELLSELRAGVFDVLVGINLLREGLDLPEVSLV AILDADKEGFLRSSKSLIQTVGRAARNVNGEVHMYGDTITPSMREAIDETNRRREIQISY NKEHGIDPKPLVKKIADITERLQREDADTRELLTEFDYGKGKRGFNSVKSDTLKPDVTTA PSENLAELAAQLTEQMHEAAEQLQFELAARLRDELQDIKKELRTMQRES >gi|294971829|gb|ADNU01000027.1| GENE 35 39392 - 39823 499 143 aa, chain + ## HITS:1 COG:L68759 KEGG:ns NR:ns ## COG: L68759 COG1764 # Protein_GI_number: 15672049 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Lactococcus lactis # 1 143 1 145 145 107 49.0 5e-24 MSVISKAQATWTGSLASGNGTVSLSSSQLGNFPLTWKARSENAPSADATTPEELLGAAHA SCYSMALANLLAQEGVAVESISTGADVTFDPEKGITKIHLYTVGRVEGLATANFETIAQR AKKDCPVSRALKGVDIDVTASLA >gi|294971829|gb|ADNU01000027.1| GENE 36 39812 - 40420 609 202 aa, chain - ## HITS:1 COG:Rv1631_1 KEGG:ns NR:ns ## COG: Rv1631_1 COG0237 # Protein_GI_number: 15608769 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis H37Rv # 5 195 1 190 230 164 50.0 1e-40 MVCMVMLIGLTGGIGAGKSTVAQLFEERGVPIVDADAIARDVVKPGEPALAELVEHFGES ILGADGELNRGKLAEVAFADAESHEALNAIMHPAISAETSKRIDVLRGDHPVIVHDVPLL VEAGLAGNYDLTVLVDTPAEVRLQRLTELRGMDPEDAKKRIAAQATDEQRRAVCDVALDN SGDIEHLRAQFEQMWERFISRE >gi|294971829|gb|ADNU01000027.1| GENE 37 40439 - 42208 1261 589 aa, chain - ## HITS:1 COG:no KEGG:Psed_0196 NR:ns ## KEGG: Psed_0196 # Name: not_defined # Def: hypothetical protein # Organism: P.dioxanivorans # Pathway: not_defined # 56 546 59 546 586 143 32.0 2e-32 MTFTRWISSRPAVRSWFTDSRREWLLFLAVCVLLSVLTYGRLVGDMGHRVFASNDDSSLF IFWFAHAADVVLSWIGLGSGERNLLYSNSMNYPAGVNGGWNTSVMGLAVPLAPVTLIWGP VVAYNVAIMCAPVACALSAAWAAAQLVSRRPAFVAGIAYGFSTYVIAQSAGHLNLAFAVL PPLVVGFVERLVTGRGRTWVNAVVLGCAVGWQFYLSNELLAHTFLMTVVFLLATVALRWT EVREGARRIAVGGAGAVGVAVVCGLPLLITMFALPGKPEGPIRPHGIWNNDLLDPVTPGK FTLISAGREIQRVIGIDDAEIGGYLGWPWLLTVAVIVVVLGIHHAMSARVRTFAVVAVVM FILSMGSPMFVNGTAAVNTGPFRLVENTPVLENVLPMRMSVHVALMCALLLAIAWHSVRP RLTPLLAVATIIIAVTTTSGTVEVRNIAYPSFYDDAVREHIPRGATVKMMPRPVASAAAH SNESLVGQAVSGMWFKQVDGYFIGSRDNVPVAYQSETTQLDDIMNGDAMPETHQVREALE DLRGRGVEYVAVTDSGFGLKHPASDIARVLSESSNVQVQFVGGVYVIRL >gi|294971829|gb|ADNU01000027.1| GENE 38 42299 - 43765 2270 488 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62426311|ref|ZP_00381439.1| COG0539: Ribosomal protein S1 [Brevibacterium linens BL2] # 1 488 1 495 495 879 89 0.0 MTTTTPETAKNSQVAVNDIGSADEFLAAVDETIKYFNDGDIVEGTIVKVDRDEVLVDIGY KTEGVILSRELSIKHDVDPAEVVEVGDPIEALVLTKEDKDGRLMLSKKRAQYERAWGDIE KVKENEGVVTGTVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLTPYIGQKVDAKIIELD KNRNNVVLSRRAWLEETQSTVRHDFLQTLQKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV SELSWKHIDHPNEVVTVGDEVTVEVLDVDMDRERVSLSLKATQEDPWQHFARTHVIGQIV PGKVTKLVPFGAFVRVEDGIEGLVHISELAVRHVDLPEQVVTVDETVYVKVIDIDLERRR ISLSLKQANEGVDPDAEEFLDPALYGMVQEYDEDGNYKYPEGFDPETQEWMEGYEEQREA WEQQYAAAQARWEEHKKQVARAIAADAEAVAEAPAEPAANYSSEEAADEGTLASDEALAA LREKLAGN >gi|294971829|gb|ADNU01000027.1| GENE 39 43983 - 44816 644 277 aa, chain + ## HITS:1 COG:Cgl1321 KEGG:ns NR:ns ## COG: Cgl1321 COG0500 # Protein_GI_number: 19552571 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 25 272 6 253 259 229 46.0 3e-60 MNETESTAEIISGGYIPIDEETSVRANRSYWDGSASEYLAEHGSFLGASDFIWCPEGVHE SEAGLLGDVSGKYVLEVGCGAGQCSRWVAKQGGFATGVDLSSGMLEQASRLSREQPLTGG AVEPTFLQADARSLPFPSGSFDIAFSSYGALPFVKDAEVVLSEVARVLRPGGAWVFSVTH PLRWMFPDVPSEAGLTVEYSYFDRTPYVELDSSGNPIYAEHHRTIGDWVKLIVDAGFELR GITEPEWPKDNHTAWGGWSPLRGELMPGTAVFSTVLP >gi|294971829|gb|ADNU01000027.1| GENE 40 44845 - 47319 2616 824 aa, chain - ## HITS:1 COG:MT1665_2 KEGG:ns NR:ns ## COG: MT1665_2 COG0749 # Protein_GI_number: 15841084 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mycobacterium tuberculosis CDC1551 # 328 824 85 592 592 513 57.0 1e-145 MLLTVLENEKPDHVAVAFDLGRQTFRLDEYPEYKAGRARTPEDFPGQVDLIQDMLRALNI PVLTLEGYEADDILATLALQATDRGVTTKIASGDKDSFQLASDTVTILYPKRGVTELNRF TPQAVEEKYGVTPANYRGLAALVGEKADNLPGVPGVGEKTAAKWLAKYGDLDAIIDNAED IGGKVGEKLRDHLDDVKRNYRLNKLVDDLELSTNPLDTQVGEGAHLDEVTALFDQLEFRQ LAERVNALFFGDVEQVPQVELPEVVATSGADLRAWLDAVEEPVGFALEDDTLGLASNDSA IWVDLTDLDENSFNALDTFISTKKVVAHDVKPQVHAWVERGFTQPRPIMDTELAAYLLAP DARGYSLADMASDLGVVLEEDRDLLTDVGEQLGHRAWVTVALYPRLRQDLERNHLQDVLD GIEIPTQEILARMEIAGIAIDQSVLNELITEFEAAAQQSASEAYASIGHEVNLNSPKQLQ TVLFDELNMPKTKRTKTGYTTDADSLADLLVKTQHPFLEHLLAHRDRTKLKQTVVGLQKV VADDGRIHTTYLQTVAATGRLSSKDPNLQNIPVRTDAGRRIRSVFQAAQDDGYESLMSVD YSQIEMRIMAHLSGDEALIQAFKDGEDLHRYVAGQVFEVPIEDVTDQQRSKVKAMSYGLV YGLSAYGLSRQLGIPTGEASALMDDYFARFGAVKEYLDQVVEEARGRGYTETMYGRRRYL PQLRSDRRQLREMAERAALNAPIQGSAADIMKIAMKRVDDALREAELKSRMLLQVHDEII LEIWAGEAIQVEKLVRENMSQAADLSVPLDVNVGVGPNWQDAAH >gi|294971829|gb|ADNU01000027.1| GENE 41 47479 - 47919 491 146 aa, chain + ## HITS:1 COG:YPO2406 KEGG:ns NR:ns ## COG: YPO2406 COG2050 # Protein_GI_number: 16122628 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Yersinia pestis # 17 138 9 132 138 84 37.0 4e-17 MPMLTPDMTPEEFDVLLEKVGHIDEDTIMKRTGMKLTKIGFDFAEGTMPVAGNLQPMGLF HGGGHVVLAESLASMHAFARNDGQPVVGVDLNATHVRAAREGTVHGRAEVIHAGRTIINH EVRMTNDEGKLLSIVRITNFLRRGSN >gi|294971829|gb|ADNU01000027.1| GENE 42 47931 - 48542 671 203 aa, chain - ## HITS:1 COG:ML1286 KEGG:ns NR:ns ## COG: ML1286 COG3707 # Protein_GI_number: 15827661 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium leprae # 9 201 8 200 205 219 62.0 3e-57 MSNSENVSAESHPVRRVVVAEDESVIRLDIVEMLREVGYDVVGEAADGESAIHLADELRP DLVVMDIKMPKMDGITAAEHIAKARIAPVVLLTAFSQKELVDRARDAGAMAYVVKPFTAA DLVPALEIALSRHAEITALEAEITDLTDRFETRKLVERAKSLLISNMGLTEPEAFRWIQK TSMDRRLTMREVAETVLNQIEKN >gi|294971829|gb|ADNU01000027.1| GENE 43 48454 - 48633 154 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRRMTDSSSATTTRRTGCDSADTFSELDTLLILDHIGKDRKSSDSVTKVLIENTLLAS Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:20:49 2011 Seq name: gi|294971824|gb|ADNU01000028.1| Brevibacterium mcbrellneri ATCC 49030 contig00030, whole genome shotgun sequence Length of sequence - 5174 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 4, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 822 530 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 2 2 Op 1 . - CDS 952 - 1200 56 ## Gobs_3967 NusA domain-containing protein 3 2 Op 2 32/0.000 - CDS 1231 - 2166 609 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 4 2 Op 3 . - CDS 2290 - 2751 471 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 2849 - 2908 2.8 5 3 Op 1 . + CDS 2850 - 3809 736 ## gi|295395324|ref|ZP_06805527.1| conserved hypothetical protein 6 3 Op 2 . + CDS 3818 - 4837 921 ## AAur_1555 streptomycin 6-kinase (EC:2.7.1.72) + Term 4994 - 5044 8.2 7 4 Tu 1 . + CDS 5052 - 5144 62 ## Predicted protein(s) >gi|294971824|gb|ADNU01000028.1| GENE 1 3 - 822 530 273 aa, chain - ## HITS:1 COG:ML1556 KEGG:ns NR:ns ## COG: ML1556 COG0532 # Protein_GI_number: 15827818 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium leprae # 2 210 3 188 924 93 37.0 5e-19 MAKPRVHELAKELGTTSKDVLAKLESLGEFVRSASSTVEAPVVRRVKELYASSNPESAGD KPASGLKTGAKKTAAKTAATKSSAAKPGAAKPTTAKTSATKTVAAKPAAPKPGAPKAGAK ETASKKAPAKKPAAPKPAPAAGKPTAEKPDAQKPADSTSAPKPGGATPKPAPKPGVPKPG AAASGAKPGPKPGRPGARPGNNPFASSQGMPKPGAKPGPKPGRPGARPGNNPFASSQGMP KPGAKPGPRGGDDRAPRPGRGPRPGCGPKPGAR >gi|294971824|gb|ADNU01000028.1| GENE 2 952 - 1200 56 82 aa, chain - ## HITS:1 COG:no KEGG:Gobs_3967 NR:ns ## KEGG: Gobs_3967 # Name: not_defined # Def: NusA domain-containing protein # Organism: G.obscurus # Pathway: not_defined # 5 68 392 455 524 69 51.0 4e-11 MSCEPIRMCVGCRKVEPTSKLSRFVSVQGSLTADTQRTLPGRGMWIHPTQACWKTARKKN AFARALRVRNLEVPDLPITESS >gi|294971824|gb|ADNU01000028.1| GENE 3 1231 - 2166 609 311 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 5 311 24 346 537 239 41 4e-63 MIEREREIPMKVLVDLIEQALLIAYQRTEGYYPDARAELDTKTGKATIWAVEFDDDDNPI GEFDDTPEGFGRIAAQTARNVIHQRLRDVEDESVLGSFKNHEGEIVSGVIQQGKYEDMVQ VNLGDVEAVLPPHEQVPGETYEHGRRIRVYITDVHKGQKGPSVTVSRSHPNLVRKLFAHE VPEIADGQVELVSLAREAGHRTKIAVAAKVPGLNAKGACIGEYGTRVRAVMGELGEEKID IVDYNENPAKFVANALSPAKAAKVEVIDESAKMARAFVPNDQLSLAIGKEGQNARLAAKL TGWKIDIVGTD >gi|294971824|gb|ADNU01000028.1| GENE 4 2290 - 2751 471 153 aa, chain - ## HITS:1 COG:MT2908 KEGG:ns NR:ns ## COG: MT2908 COG0779 # Protein_GI_number: 15842383 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 6 152 9 157 183 67 32.0 6e-12 MKNEAQQVTDLIRTPLSQAGLIVEDVKAHAAGQYRKVTVVIDLDTDTSDPVSLDTIAQAT KIVSELIDDVELFNDKPYDLEVTSPGATRELTAKRHFLRNRGRNLDVRTNGPTYTGELVD VTDKGITLMDTKKVDYVIPFSDITKAKVVLKFR >gi|294971824|gb|ADNU01000028.1| GENE 5 2850 - 3809 736 319 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395324|ref|ZP_06805527.1| ## NR: gi|295395324|ref|ZP_06805527.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 319 1 319 319 566 100.0 1e-160 MAIMQGKGTLGRRSFLALTAAVALTSGCGIRVDSDPELPTLSPTDTVRNRVARILENTQA TGEETSVRDRLSKAVGPVWAPPSELATESPSPEPQRNFKDALTEIHSAITGDFTSLAGAT SATLADVAVGAALVLLRDFKAEERKVTESFSPVVSPTPAPEQNSDDDKADVRKDESEDED GQKTDGFAEFISACHKSSYAYQRLAVFEDEKSPYGMFVRDRHDLLAHAAEEARSFATSVG IENLPANKPAWQLPSDPRDTKKLAIEAESLLTATLPSVFTFTHPQDPQTEKEVHAFALRH LYESARATQKAGKFELLRF >gi|294971824|gb|ADNU01000028.1| GENE 6 3818 - 4837 921 339 aa, chain + ## HITS:1 COG:no KEGG:AAur_1555 NR:ns ## KEGG: AAur_1555 # Name: sph # Def: streptomycin 6-kinase (EC:2.7.1.72) # Organism: A.aurescens # Pathway: not_defined # 23 324 21 316 336 146 36.0 1e-33 MKVPESLLGAVGELIGPERADAWAAALPFMFNELCDRWSLTPDPVPGSPWAGAESLVVPV LTKENYQAIVRFASPNSANPHVHAQVLEALRAWNGRGAVRIIEEDSSFRATLQERLITAE NLSTVPLDQVPPIWGQLVRVLTVHGGRGFVRVQDIAQGWLNKFNSNVQALADYRSFRPED RQVIDQAHMWSTRLAQSQESYLLHADLHYYNILAGHPDANGISTWKAIDPQPLLGPAAYM VAPMLWNRLYEIPTPDPAKQAKWLYDFAVSLCQHAGIDPQFGLGASIAREVANMFWYLKS ARGGTQKAYGDADRSLWVARALAGMGSYGVNAHSLKKLG >gi|294971824|gb|ADNU01000028.1| GENE 7 5052 - 5144 62 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLGTHPLVHLLTLDESFSSEQQDRLVELL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:21:16 2011 Seq name: gi|294971820|gb|ADNU01000029.1| Brevibacterium mcbrellneri ATCC 49030 contig00031, whole genome shotgun sequence Length of sequence - 1247 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 477 185 ## Ksed_06440 TrwC relaxase + Term 681 - 709 -1.0 Predicted protein(s) >gi|294971820|gb|ADNU01000029.1| GENE 1 1 - 477 185 158 aa, chain + ## HITS:1 COG:no KEGG:Ksed_06440 NR:ns ## KEGG: Ksed_06440 # Name: not_defined # Def: TrwC relaxase # Organism: K.sedentarius # Pathway: not_defined # 29 102 1051 1124 1184 63 47.0 2e-09 DDTDPAAELAAWLDRVTLNQAVRRSGNRRRVAGLIPTPAEPVSEDMRAALAERQELVESA AGGLLHYAISEGESWIKRLGAPGDDARSRTVWIGHATTVALYGTATASLIRSPWERPRGS RRPSKLSSTGMPPLRSAEPRRRKHPPPYDHPTALPGKT Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:21:32 2011 Seq name: gi|294971789|gb|ADNU01000030.1| Brevibacterium mcbrellneri ATCC 49030 contig00032, whole genome shotgun sequence Length of sequence - 35490 bp Number of predicted genes - 30, with homology - 30 Number of transcription units - 18, operones - 6 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.111 - CDS 162 - 1649 1358 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 2 1 Op 2 . - CDS 1715 - 2179 444 ## COG2030 Acyl dehydratase - Prom 2229 - 2288 2.5 3 2 Tu 1 . + CDS 2306 - 2965 768 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 2845 - 2879 -0.9 4 3 Tu 1 . - CDS 3014 - 4345 817 ## COG0303 Molybdopterin biosynthesis enzyme 5 4 Tu 1 . + CDS 4379 - 5236 563 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity + Term 5455 - 5489 -0.9 + Prom 5570 - 5629 1.5 6 5 Op 1 . + CDS 5697 - 6686 548 ## COG0464 ATPases of the AAA+ class 7 5 Op 2 . + CDS 6696 - 9251 498 ## MAV_3792 Y4bN protein - Term 9132 - 9176 2.3 8 6 Op 1 . - CDS 9334 - 10137 764 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 9 6 Op 2 . - CDS 10204 - 11433 1075 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 10 6 Op 3 . - CDS 11420 - 12268 368 ## Kfla_5597 hypothetical protein 11 6 Op 4 . - CDS 12252 - 13301 715 ## gi|295395341|ref|ZP_06805542.1| hypothetical protein HMPREF0183_1040 12 6 Op 5 19/0.000 - CDS 13303 - 13947 711 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 13 6 Op 6 . - CDS 13938 - 15179 1050 ## COG4585 Signal transduction histidine kinase - Prom 15297 - 15356 2.3 + Prom 15306 - 15365 1.6 14 7 Tu 1 . + CDS 15391 - 15996 484 ## gi|295395344|ref|ZP_06805545.1| conserved hypothetical protein - Term 16044 - 16097 16.1 15 8 Tu 1 . - CDS 16115 - 16876 864 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 17012 - 17071 2.4 + Prom 16986 - 17045 1.9 16 9 Op 1 . + CDS 17070 - 17777 479 ## COG1309 Transcriptional regulator 17 9 Op 2 . + CDS 17800 - 19308 1450 ## COG0427 Acetyl-CoA hydrolase 18 9 Op 3 . + CDS 19351 - 19677 350 ## COG0607 Rhodanese-related sulfurtransferase 19 9 Op 4 . + CDS 19764 - 21404 1501 ## COG0033 Phosphoglucomutase + Term 21425 - 21467 2.7 - Term 21146 - 21205 4.2 20 10 Tu 1 . - CDS 21418 - 24174 2489 ## COG0474 Cation transport ATPase 21 11 Tu 1 . + CDS 24335 - 25555 1143 ## COG0477 Permeases of the major facilitator superfamily + Term 25596 - 25652 9.0 22 12 Tu 1 . + CDS 25758 - 26414 877 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC - Term 26289 - 26327 0.1 23 13 Tu 1 . - CDS 26371 - 27465 774 ## COG1929 Glycerate kinase + Prom 27424 - 27483 2.1 24 14 Tu 1 . + CDS 27509 - 29491 2025 ## COG3590 Predicted metalloendopeptidase 25 15 Op 1 . + CDS 29759 - 30064 288 ## gi|295395355|ref|ZP_06805556.1| conserved hypothetical protein 26 15 Op 2 . + CDS 30177 - 30779 821 ## gi|295395356|ref|ZP_06805557.1| possible Propeptide PepSY amd peptidase M4 + Term 30932 - 30987 13.4 - Term 30733 - 30765 1.3 27 16 Op 1 . - CDS 30802 - 32352 1151 ## COG3358 Uncharacterized conserved protein 28 16 Op 2 . - CDS 32418 - 33665 1014 ## COG0477 Permeases of the major facilitator superfamily - Prom 33709 - 33768 1.9 29 17 Tu 1 . + CDS 33685 - 35010 902 ## COG1362 Aspartyl aminopeptidase + Term 35099 - 35139 12.0 30 18 Tu 1 . - CDS 35156 - 35488 212 ## gi|295395360|ref|ZP_06805561.1| possible EP3-2 procyclin Predicted protein(s) >gi|294971789|gb|ADNU01000030.1| GENE 1 162 - 1649 1358 495 aa, chain - ## HITS:1 COG:Cgl2685 KEGG:ns NR:ns ## COG: Cgl2685 COG1502 # Protein_GI_number: 19553935 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Corynebacterium glutamicum # 8 494 2 499 500 387 39.0 1e-107 MDLWATQLFELDWPAWLVTLLIIPDILIRLIALGWVPYRRKPAVGLGWLLAIFFIPYVGI IAFLIFGSSKLPAKRRKDQETINDLIKAQTGAQAILGKSEHLSEPLRTSAQLNYSLGALP MTHGNSFSLLPDNHEAIRLMAKEVEQAKKFVHVEFYIAAYDSTTAPFFDALKEAAERGVH VRVLVDHIGCVGYPGYKELVKLMDNSPIDWRRSLPVRPWRLEYQRPDLRNHRKIVVIDGA VGFTGSLNAIDKTYNKRANVKKGFEWKDLAIRCTGPVVNELDAVFATDWYSETGDIISDE LQLTMEVPNEGGIMAQAVPSGPGFPLENNLRLFNHLVYNANKRVVIVTPYFVPNESLKQA LTTEAHSGVDVRIYVSEQGNHAILQYAQESFYEELMENGVKIFLYPEPTILHSKFILVDD NVTVIGSSNMDERSFAMNMEISLLIVDEGVTSSLYDLEEEAYVPVVKELNIEQWRKRSLK QKYLENVCRLTSSLL >gi|294971789|gb|ADNU01000030.1| GENE 2 1715 - 2179 444 154 aa, chain - ## HITS:1 COG:MT0138 KEGG:ns NR:ns ## COG: MT0138 COG2030 # Protein_GI_number: 15839511 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mycobacterium tuberculosis CDC1551 # 5 152 2 150 151 162 53.0 1e-40 MAEPRVINGVEELEALVGQQIGTGEWFEITQERVSQFADATNDHQWIHVDEERAKEGPFG ATIAHGYLTLSLIAGLSPKIFTITGMKMMINYGLNKVRFPQPVPVGSRVRDVVEVAEVNR KSSGVQVVMNHTVEIEGSDKPACIAQTVTLMVEA >gi|294971789|gb|ADNU01000030.1| GENE 3 2306 - 2965 768 219 aa, chain + ## HITS:1 COG:Cgl1722 KEGG:ns NR:ns ## COG: Cgl1722 COG0494 # Protein_GI_number: 19552972 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 21 204 11 211 259 88 38.0 1e-17 MADHTPAHPVSDFDPLQVPIRKAVSVLMVRNNPHLELFIQHRVTTIDFAAGMVVYPGGRV DDADYHSPITASASHAQKWARTWATDSPTINALLTAAVRETREETGATLDPTALHPWANW TTPPGPKRRFDTYFYVADAHNLAAQHQTTEATNSEWAPAHTLLADYNAHRLDMMRPTLHL LNEIIELGTVDAILDAAAHRSIDPVRPTTADAKDLGKAR >gi|294971789|gb|ADNU01000030.1| GENE 4 3014 - 4345 817 443 aa, chain - ## HITS:1 COG:VC1527_2 KEGG:ns NR:ns ## COG: VC1527_2 COG0303 # Protein_GI_number: 15641535 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Vibrio cholerae # 50 441 25 396 400 102 27.0 1e-21 MVENGTSQSGQVGAPGPGAAAVQAPNPLDAMRIAYESGARMPAPQVTRPLDQCVGEVLAQ DVRVVRDVPHYDSSAMDGFAVRGPWPWTVGECAWPVATGSLVPPEAASVVRQEWVQVEAG ETGAGGGTSVGSGAAAERISLAPGMPQRDLEPGRNIRRAGREALTGDLVARAGEVLTPAQ VAFAAVAGHDALPVCARPRVGLLLTGTEVVAAGLPQPGFVRDAFGPQLPAYVRMLGAEVV ASVRIGDGEAETEDALEKLVGQCDVVVSTGGTGHSRVDEVRRAALRRVTGEAGPNGPNSK PGRVLFPELNMRPGHPTFLMEHSGVVHVGLPGNPLAAMVALRLVLTHVLRGALGRTIEQP QTVNLAHDFDPGQGRSGAGSAWRVMPAKPGDTSGAGANPHRWELCDKRGSNMLRGLAKAR GLVIIPPEGAGAGDAVACLPLPV >gi|294971789|gb|ADNU01000030.1| GENE 5 4379 - 5236 563 285 aa, chain + ## HITS:1 COG:MT2967 KEGG:ns NR:ns ## COG: MT2967 COG1526 # Protein_GI_number: 15842442 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Mycobacterium tuberculosis CDC1551 # 17 282 17 275 276 201 44.0 9e-52 MRRSVRTRVHVFGPNGRIRTKTDKVVGEEPLEIRLGDQEFTVMMRTPGMDTELVLGLLLG EGIIRAASDVVEIDFSTGLDPDGTRNYNVARVRLSPEVSSALAENGGLPAGQERNIYTSS ACGICGTAALEAVTKVSSYPLPTPEPFFDPAVVCELPNIMRDQQPLFATTGGIHAAGLFE FGAGSPTLLTVAEDVGRHNAVDKVLGWAMREDLLPLSSCVLQVSSRASFELVQKAAMAGV PVLSAVSAPSSAAVELGNSLGVTVIGFNRKGTFNVYSAPERLRGN >gi|294971789|gb|ADNU01000030.1| GENE 6 5697 - 6686 548 329 aa, chain + ## HITS:1 COG:AGpT158 KEGG:ns NR:ns ## COG: AGpT158 COG0464 # Protein_GI_number: 16119896 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 320 18 339 345 295 52.0 7e-80 MATSDQLKALVQSHADGDDAQFYAVAMQVAAKAARSGHTNLARDLRDLVDDLRQNSTAPS VAPVIPVTQPRGELASLLSVTYPNAHLGDLVLSEKLSASIVRVLTEQRQRDTLVRHGLRP AQRLLLTGPPGTGKTTTAQVIAAELNLPLFTVRLDSMITKFMGATAAKLRLIFDAIAETR GVYFFDEVDALAGDRAAANDVGEIRRVLNSFLQFLEEDISDSLIITATNHPQLLDKALFR RVDTTLEFDLPDDEGIKSVIKNRLATFQIGNLGWRRVILAARGLSHAEIAVAAENSAKSS VLSGTTRILTDDLVAALEYRPRVNTSVER >gi|294971789|gb|ADNU01000030.1| GENE 7 6696 - 9251 498 851 aa, chain + ## HITS:1 COG:no KEGG:MAV_3792 NR:ns ## KEGG: MAV_3792 # Name: not_defined # Def: Y4bN protein # Organism: M.avium_104 # Pathway: not_defined # 9 849 1 842 844 1018 62.0 0 MSKRNREHIFVPSSPQHEPYTPSSSGRNKTSRAAINNRRAHGTRLLEEYTEASAPPQEES TRKGTHISFLSFAGFELALQSLDVQRQGEQPELVSVTTRETPDGNVQIATVYIPDGKKQY FLERLEDYIKTCEQEKTKHENLIEGIQEIRRATIKELWTDPVGLFPTDVTEVRWWEVWLR KRDNHELARFTAYASEHKLRVSDHFLGFSGRTVILVKASAEKLAETMSSLDDIAELRHPH DVSNVLAESSAFEQAEWVEDLCRRLSEAPADAPAVCILDTGVQNSHPLLSGSLHDSDIHV ADARWKPAPVYPHGTEMAGLALYGNLESAVLSSRPVQLYHRLESVKFLPDVGDNAPAIYG AITASSVARPEVQAPMRSRVFMLAVTAPTPDENTKTRTNGAPAEAGQPTSWSATIDALSF GRSVVNVDSRITYLDPSEKPHPRLFLISVGNIRDIDARDNHLDRSVLEPVEDPAQAWNAL TVGAYSERDDMSGAPHLFAGYTPIASRGELSPVSRTSVMFEPKKWPFKPDVVADGGNFAA LPGNPLAEKPPNLSLLTTRLQKLGQGFFTTTSDTSAATAQVAALAADIYATYPTLRPETV RALVVHSAQWTNTMRSHFTAAKNKSEKVSLLRRYGMGVPDAERALRSASDALTLIAEATI HPFERRDDSNDGKLREMNLHRLPWPEEELENLGDTPVELRVTLSYFVEPNPSRRGWTGRY VYPSHGLRFATRRPEESVDSFRQRINKHARTEGKHPPTLSTETGWLFGSNQQQSPGSLHT DIWTGTAAELAQKGVIAVYPVSGWWKNRGNDDQSDKGVNYSLVVSIEAPEVDIDLWTAVA QQVRTPVEVSN >gi|294971789|gb|ADNU01000030.1| GENE 8 9334 - 10137 764 267 aa, chain - ## HITS:1 COG:BH0207 KEGG:ns NR:ns ## COG: BH0207 COG1024 # Protein_GI_number: 15612770 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Bacillus halodurans # 10 258 4 246 259 130 31.0 2e-30 MDAFEAEYGTVTLTIEDRLAHVEFNRPETLNSLTHEMFADLVDAGRFVEARDDVAAVVLT GKGAGFCSGLDMSEFKKMAGGQAELPEAREGVGPAKALAQQAVFVWQQVEAPVIAAVQKV AFGGGLQIALGADLRVAQPDAKLSMMEINWGIVPDMCGTQLLPRVVGAGNAKRMIFTGEV VTGQRAYEMGLVEELAQDANARALELGRELAGKSRSALTQAKMLVDLSGRASLSDAFAAE QRAIRSLIGGEEQAEAVRKRMRELGKG >gi|294971789|gb|ADNU01000030.1| GENE 9 10204 - 11433 1075 409 aa, chain - ## HITS:1 COG:ML2046 KEGG:ns NR:ns ## COG: ML2046 COG1304 # Protein_GI_number: 15828105 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Mycobacterium leprae # 1 405 1 406 414 406 51.0 1e-113 MVTIRRVPQLKNFVPLMQFDLNLGGRKSRLARVGDIDDLRRIAKRRTPAGPFNYVDGGAQ DEYTYRGNREAFRNLEFDPAILAGSADVDLSTTIAGVESRLPVGIAPTGFTRMMHTEGEV AGVRTADRFGVPFTLSTMGTRSIEDVAACAPNATKWFQLYLWRDRDASQDLLERAWKNGF ETLLVTVDTTVAGRRLRDVRHGLTIPPKLSAGTVLDASYRPEWWFNFLTTDPLTYASLSN EVSDLASLTSSMFDPTLSFEDLKWIRSVWPGKLFVKGVLTEVDASKSFDAGADGLVVSNH GGRQLDRAPITLEALPVVREAVGEDVPIILDSGIMRGQDIIGALALGADFTLIGRAYLYG LMAAGEAGVRKVFEILENEMTVTMQLMGAGSISDLNPDMVRTYSRNLKS >gi|294971789|gb|ADNU01000030.1| GENE 10 11420 - 12268 368 282 aa, chain - ## HITS:1 COG:no KEGG:Kfla_5597 NR:ns ## KEGG: Kfla_5597 # Name: not_defined # Def: hypothetical protein # Organism: K.flavida # Pathway: not_defined # 26 264 35 262 279 113 35.0 9e-24 MTTPTDGSGQGGSAQYGTEPAQEPGQGGSAQCGTEPFPSPAPASSVPLAQAKRLQPGDVV RWRFRRHDYAAHGVDVVQPVRVVRHDERGLVVWLAGGTPVVHARLAGFESVNPHNVPDHV RFNPRRIDRVAVGGQWYGRGVLRLIPVGMPFSVWVFREASGTVNAHYVNLEGHHRLGPAV DGRAMGELYTSDHVLDLVIRPGQVPELKDEDELAAAVKYGQWDAGVAAAIRSNATVALGQ WEQGAWAFTEDWSGWQEPASWDIPRRECVDPDGSVEWHHGDH >gi|294971789|gb|ADNU01000030.1| GENE 11 12252 - 13301 715 349 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395341|ref|ZP_06805542.1| ## NR: gi|295395341|ref|ZP_06805542.1| hypothetical protein HMPREF0183_1040 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1040 [Brevibacterium mcbrellneri ATCC 49030] # 84 349 14 279 279 459 100.0 1e-127 MTMPTNYSGNPVPGGHNPAGQQTDGQHPGGQNAYPQPPRAGGHPQQPKPKKYTKPAPPLS STGRILWRIAVAAVVCLAVAVPASLGAAAAVQLLKVEVVEKNIPFNPATDTLELNGENVY VKVVPTKGDGFIKYKAVGSGEPPKVETRTSDSADQVNVTHEPGNWTATRNTTVTIGVPEG KARNIQADWKSGDIYIESGKYHDVKVTSERGVVHFNGSATNVELSTRSGVISAAGEAESF TGRARTGSVTVDELKVTGAVALEATSGALTYEMSDDAQPSSIRAEAKTGVVDIELLDPED VSGGHPYNVKAETQTGEKIVNVDSNDSDPNAIPVTASTKTGAITIDYTN >gi|294971789|gb|ADNU01000030.1| GENE 12 13303 - 13947 711 214 aa, chain - ## HITS:1 COG:CAC2254 KEGG:ns NR:ns ## COG: CAC2254 COG2197 # Protein_GI_number: 15895522 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 195 2 198 213 109 33.0 3e-24 MRIVIAEDSVLLREGLVRLLTDAGHEVVATLSDATDLLSSVTDLNPDLVIVDVRMPPTFT DEGIRAAVLIRSQNPEVSVLVLSQYVEERYASDLIAENTGNFGYLLKDRVADVDDFLAAV EDVAGGGTVLDPEVVAQIMVRSRKKDGLAVLSERERQVLQLMAEGKSNSAIASTLFLSSG AVEKHISSMFTKLGLLADSDENRRVLAVLKFLGV >gi|294971789|gb|ADNU01000030.1| GENE 13 13938 - 15179 1050 413 aa, chain - ## HITS:1 COG:DR1556 KEGG:ns NR:ns ## COG: DR1556 COG4585 # Protein_GI_number: 15806565 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 214 411 353 560 569 94 31.0 4e-19 MKKELLIPNPWGMLNVLFSGIIATVWLWVQLVVITTGISTALAAGMGLVVLFFWVFVQRG INVLERRRSEAIYNTEIPFPPRRRSNSTGFKGWVETNIRAAGEAYFWRETALHFSKQVLG LFTLILVALCAQFATLLFIGAINPDAILIVFDAPVQGSARGMFVVFGCLAFIVGFVSLWV AAIADRALDRWLLAVPQAETLKQELTEVDRARVGAVDAATTERLRIERDLHDGVQPTLVA LSMKVGMAKAKVARDPEGAHALLEEAHSDSKAAITQLRELVRGIHPAVLTDRGLDAAVSA LAARSAVPVTVNVNVPRVAPNIESVAYFVVAEALSNMGKHAQATEGHVNITHMGGRMRIE VRDNGRGGAQLSTTGSTTGLAGLAQRVTAARGTFNVHSPVGGPTVITVELPCE >gi|294971789|gb|ADNU01000030.1| GENE 14 15391 - 15996 484 201 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395344|ref|ZP_06805545.1| ## NR: gi|295395344|ref|ZP_06805545.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 28 201 1 174 174 298 100.0 2e-79 MDESHTPLRSRNRTFILFWISAITGVAMYVTQLILVERGDLPRSLPTGDSVGLVTMGVEI ALGVLALALLPAAIRHDPMEREKSYVGPPEALVASLVILCLWFVTLLAAPAGAVVLISLS ARLSPSWTLPAIAASILSIVVRELTYSPLVHDFDYRIALGAFCLTMILICMGTARGVVLR RQLVHSFRTRHDADETQNAHK >gi|294971789|gb|ADNU01000030.1| GENE 15 16115 - 16876 864 253 aa, chain - ## HITS:1 COG:MT1177 KEGG:ns NR:ns ## COG: MT1177 COG1028 # Protein_GI_number: 15840585 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis CDC1551 # 1 253 1 250 250 245 55.0 7e-65 MKLGGAVALVTGGASGLGLATTKRFLEVGAKVVMVDLNEEVGNEAAASLGDNAHFVAADV QNEEQVQAAVDKATSLGDLRVVVNCAGVATPGKLVGKKGALPLDQLKLVIGVNLIGTINV CRLATVAMQQNEELDGDRGVIINTASVAAFDGQIGQIAYSASKGGVHAVTLPMARELAAS KIRVNTIAPGIFQTPMMAGLPQAAQDSLAASIPHPARLGTPEEYAQLADMLVTHEYINGE TIRLDGAIRMAPK >gi|294971789|gb|ADNU01000030.1| GENE 16 17070 - 17777 479 235 aa, chain + ## HITS:1 COG:DR2376 KEGG:ns NR:ns ## COG: DR2376 COG1309 # Protein_GI_number: 15807366 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Deinococcus radiodurans # 7 189 9 191 197 58 26.0 8e-09 MTKSNGRDQILQAALVTFAHKGFDGASIRDIAQRADLSLSALYYYFSSKKEALFALVDKA YSTYNERTAEILAQAPHDVNAQVAYGVRHLVSYRCINVLYSRVILLETGRLSAPRYAEAH AMQRESSSIFEKIIARGRSQGIFHVDDPALMTRSVNAMCNAIPQWFVPGGAYTPETLAYQ YVQTTLRMLGSEQARNIELYFNGRVDASATRIDPGPAEPNGDENVAVDRVRLPPL >gi|294971789|gb|ADNU01000030.1| GENE 17 17800 - 19308 1450 502 aa, chain + ## HITS:1 COG:CC3724 KEGG:ns NR:ns ## COG: CC3724 COG0427 # Protein_GI_number: 16127954 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Caulobacter vibrioides # 2 501 14 513 514 604 57.0 1e-172 MSRILCPELTHKVMSAADAAAFINHGDNVGMSGFTGAGFPKAVPQALANRIRDAHSAGDE FSIGMFTGASTSAEVDGALAEVDGVHLRTPFNTDPDMRKAINDGRVEYMDQHLSHLAQQV WFGFYGNLDVAVIEVAAILPNGLLVPGTSVGNNKTWLDLADKVILEVNEWLPTQFEGMHD VYYGTRIPPHRNPIQLLSPDQRIGDPYLRVDPDKIVAIVKTDAPDRDNTFSPVDDASEAM AGYLIDFLRHEVKAGRMPKNLLPLQSGVGNVANAVLAGLADSEFEHMTSYTEVIQDNLLA LLDTGKLDSISATSFSLSRDVAEKFNKNIDSYKGRILLRPQEMSNHPEIVRRLGVIAING MVETDIYGHVNSTHVMGSKMINGIGGSGDFARNAFLNFFVSPSTAKDGKISSVVPMASHV DHTEHDVHVIVTEQGIADLRGLSPHKRAERIINNCAHPDFRDALRDYYDRACKSATGLHT PHILEEALSWHVSLRDTGTMQR >gi|294971789|gb|ADNU01000030.1| GENE 18 19351 - 19677 350 108 aa, chain + ## HITS:1 COG:L193291 KEGG:ns NR:ns ## COG: L193291 COG0607 # Protein_GI_number: 15672766 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Lactococcus lactis # 13 90 41 116 125 79 44.0 1e-15 MSEPTVTVPEIPDDAVFLDVREDFEFEAGHIEGAHHIPLSELEPRYGDVPVDVDVYVMCR SGGRALRAAAWLNLNGFDAIVVEGGMGAWNLDHGRPIVSENGQEPTVV >gi|294971789|gb|ADNU01000030.1| GENE 19 19764 - 21404 1501 546 aa, chain + ## HITS:1 COG:Cgl2489 KEGG:ns NR:ns ## COG: Cgl2489 COG0033 # Protein_GI_number: 19553739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Corynebacterium glutamicum # 4 545 5 552 554 667 63.0 0 MTNRAGQPAQETDLVDISKLLDAYHDTVPTPSETTQRVSFGTSGHRGSSLTGSFNEAHIV AITQAIIEYRAGQNYTGPIYLGRDTHALSEPALLTVLEVLAGANVPAMIDDRDGYTPTPV LSHAIITHNKRVGTAQGLADGIIITPSHNPPGDGGIKYNPPHGGPAGADITAWIENRANE LLEGSWRDIPRTSFQRAFHLENTTNFNYVENYIDDLGAVIDMEAIAQSGLRLAADPLGGA SVDFWSSISEIHDLNLDVVNSQVDPAWAFMTLDWDEKIRMDCSSPYAMASLIDSAGDYDL GFGNDPDADRHGIVTPDGGLMNPNHYLAVAIDYLFQNRPGWGAEVAIGKTLVSSSLIDRV AARLGRKLVEVPVGFKWFVDGLADGTLGFGGEESAGASFLRMDGTAWSTDKDGILLCLLA AEITAKTGETPSQRHAKLVAELGASSYARVDAPATPEQKAVLKKLSASDVTATTLAGDPI TGTFTEAPGNGATIGGLKVTTDNAWFAARPSGTEDVYKIYAESFKGDEHLAQVQEQAREV VGAVLK >gi|294971789|gb|ADNU01000030.1| GENE 20 21418 - 24174 2489 918 aa, chain - ## HITS:1 COG:MA4082 KEGG:ns NR:ns ## COG: MA4082 COG0474 # Protein_GI_number: 20092875 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanosarcina acetivorans str.C2A # 18 886 5 878 909 556 39.0 1e-158 MSPSPLTETLAIPNPHARQPDDVISALDTSADTGLTETQASSRLKSHGRNELARAKTTPL WRRVLRLLNEPLTYLLFVAIIVSTFAWVAEGRQGAPIDAIVIAAVIIVNTAIGLVQELKA ADAVASLKQMTSLNATVTRDGRTQVIDATDLVPGDILQLAEGDAVPADARLLSCNGLMVA ESALTGESVPVHKTVEAVTPDTPLADRLTMVYSGTAITQGSARAVVTGTGAISEIGQVAG MISTAETTSTPLQKEMAAVGKTLTIVVTAIALAVMATLYLVTADHSVASLVSILLLGVSL AVAAVPEGLTAIVSVILAMGVRRMATHQAIVKKLDAVESLGSAGVVCTDKTGTLTLNQMT IDRVITADGRFHITDAQAADTLIFGSIASNARLAADGPIGDPTEVAFLIGCSDAGLSIPK PHRLDELPFSSERKRMSVLIANHTNSADTNTTDPDAAKLVMKGAPDVVLARCTHVRTADG DIEATPEVLSRLEEEVTSLAGEAYRTLAVAVREVSDTSGGERNPAPNLDAEAEQGLTFVG LVAMIDPPRPEAKEAIAQAQRAGIRVIMITGDHPLTAQRIATDLGINEPKILTGAQLNEL DDEQFAEAVETTAVFARVDPSHKLRIVTSLQAHGHVVSMTGDGVNDAPALKRADIGVAMG ITGTRVSHDAATMILADDNFASIIKAVKLGRGIYANLKKVLRYLLSSNMGEVLTVFGGVV LAGMLGLIQTDGTVILPLVATQILWVNLVTDSAPALALGVDPVDDHVMTKPPRRPDQRAL DGREWARILSTGFVMAVLSLLALDACLPGGLIEGNDDVATGRTVAFTVLVILQLVNTLSV RHAHRSMFIGMLSNHWLWLALAVGLLLQLLVVYLPVLNAAFSTVPLDGQHWLLVIGCAVV FVILEELRRAVTTMAQRG >gi|294971789|gb|ADNU01000030.1| GENE 21 24335 - 25555 1143 406 aa, chain + ## HITS:1 COG:mll7465 KEGG:ns NR:ns ## COG: mll7465 COG0477 # Protein_GI_number: 13476206 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 1 392 1 391 407 194 32.0 2e-49 MLSTYRDILSLPGAWRFSFAGLIARFPMAILGLGIVLFVQGVTGSYGLAGILSAVYMVAQ AIGNPILAKLVDKHGQSKVMVPVTYVHIAATVVLVVAVYADLWWLVYPATVLTGATVGSV GSLVRARWSYVSPTPRHFSTALSWESVADEFLFIVGPVFVTVLATAVQPAVGIIASSVLL AVGATLYYSQKGTEPPIIERDPTAPKGKVMSNPAIFVVVLSQLFVGINFGALDVGVVAFA EEQGMKSLAGVALGVHAIGSLSAGIVYGAITWKSRARVRFALALSALALGGWAFQLASSL VVLCVIVFFVGLTVAPSIIAASTIIEQFAPLARLTEAFAWIGTLMSVGVAVGSVLAGIAI DSYGAKAALAIPAMGSSVAALVVIVCNRMLDTGYKRHQREVVETGE >gi|294971789|gb|ADNU01000030.1| GENE 22 25758 - 26414 877 218 aa, chain + ## HITS:1 COG:Cgl1634 KEGG:ns NR:ns ## COG: Cgl1634 COG2372 # Protein_GI_number: 19552884 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Corynebacterium glutamicum # 7 125 9 131 204 71 34.0 1e-12 MTHRSALSLLLSAVLTLVIGSFGLMFASPALAHDQLIGSNPKNGAKLDKQPEWLELEFSG NIQDIGTEIQVMHEGKDVSAGEIAIEGRKVTSALPDDLAPGDYKVVWRVVSSDGHPISGT LEFTINDSNAAGGTTSENEGDASTNEQPAEGTGDNKADNANNNGSSADTSADTDASATAN EDNGGISPIAYVVIALGAVGVVALVIVMFRRKSRGLEQ >gi|294971789|gb|ADNU01000030.1| GENE 23 26371 - 27465 774 364 aa, chain - ## HITS:1 COG:BH0555 KEGG:ns NR:ns ## COG: BH0555 COG1929 # Protein_GI_number: 15613118 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Bacillus halodurans # 2 309 4 325 380 167 40.0 4e-41 MILIASDAFKGTIGSLEVAQSLRGPCEEAGFPVTVLPLADGGEGTVDALVTCGYEAHQVE VTGPLGQPVTARWASLRDTAEVAAGGTQGGTADGAQGGTAVIEMAQASGLHLVDPSPQTA WDAHTYGTGELIAHAIEYGCARIVVGVGGSATSDGGRGALRAVKEAGVDTSGVAFTVACD VDNPLTGPRGAAEVFGPQKGADRATVARLEERLARWADQLDPTGRVWDLPGAGAAGGLGF ALMAGLGANRVSGAEFVLSAVGFDEQLERASVVVTGEGQFDEQTLGGKGPGTVIVRAGEA GVPVIVVCGQATLRAGAEVAEVFALTDLAPVQQCIAEPGRVLKEVGYALAATVRDRGFCD GTSQ >gi|294971789|gb|ADNU01000030.1| GENE 24 27509 - 29491 2025 660 aa, chain + ## HITS:1 COG:ML2613 KEGG:ns NR:ns ## COG: ML2613 COG3590 # Protein_GI_number: 15828409 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Mycobacterium leprae # 5 660 21 666 667 565 46.0 1e-161 MTVLPTDDFFRHVNGQWLDTFEIPQDRAGDGQMRQLHDAAEVAVRDIITGLGAGAGDGAD AQAGSAGPEEATAGAVAPAGSPAQMVSDLYSSFMDTQTIEDRGLEPLQPLFDLVKGAKNH QELARVSGELYRHGVSGVIAAYVSPDAMKSDTYAMYMMQDGITLPDESYYSDEQYSEIRT EFVEHIERLAQLTDLVKHTGFTSSDLATHVLAIETDMASHHWDRVAVRDAQKTYNPVTRA ELVELTEGFDIDAWLDALGVDPSVDHFIVGQPSAITGDTDVWAQSDLEVLKAWTIYQILN SRTGALPEAVVDEHFDFFSRTLSGTPQIRERWKRGVSLVEGYLGEVVGKLYVEKYFPPES KDAIRELVDALIEAYRQSITNLDWMGEETKQKALTKLSQFTPKVGYPDVWREYNFEVKAD DLAGNVDRATVAETKRHIDRINQPIDPHEWLMNPQTVNAYYHPVLNEIVFPAAILQPPFF DADGLPASNFGAIGAVIGHEIGHGFDDQGSRYDGTGNLVNWWTDEDRECFTERVQGLIDQ YDVLVPEGLDPSDTVNGSLTVGENIGDLGGLGIAWKALNIASDGNVSEDDARAFFTAWAI AWKSKFRAEERRRRLAVDPHSPEEFRCNQVLKNMDAFHETFGTKPGDGMWLDPAERVSIW >gi|294971789|gb|ADNU01000030.1| GENE 25 29759 - 30064 288 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395355|ref|ZP_06805556.1| ## NR: gi|295395355|ref|ZP_06805556.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 101 1 101 101 178 100.0 1e-43 MSFLHTNVVAEREELLQAARNLLHPGGVFLTVSHAQMPPWARENFTDEQWEARTRALPTL ESEPALLSGEVLLAEVWDRTVADPSGQPAVLEDLVVAVRRP >gi|294971789|gb|ADNU01000030.1| GENE 26 30177 - 30779 821 200 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395356|ref|ZP_06805557.1| ## NR: gi|295395356|ref|ZP_06805557.1| possible Propeptide PepSY amd peptidase M4 [Brevibacterium mcbrellneri ATCC 49030] possible Propeptide PepSY amd peptidase M4 [Brevibacterium mcbrellneri ATCC 49030] # 1 200 4 203 203 272 100.0 1e-71 MNLRKAFLAVPIATALALAGCGGNEGEGAQQTTGGEQAPAEQATEESNESVDDNGVTSLD DDDDNNEKGGSVEAANAAIDTAEAEVKDSKAIGIDHEDDGTWKVDVLAGNKKVEVKVSAD GSSVEKKDDADSDDKNAASQVRQTLKEAIASATRHTPGTVDEAELSSDDGVHWEVKVYPK GKTESVELKIHHRSGDVIKD >gi|294971789|gb|ADNU01000030.1| GENE 27 30802 - 32352 1151 516 aa, chain - ## HITS:1 COG:Cgl2984 KEGG:ns NR:ns ## COG: Cgl2984 COG3358 # Protein_GI_number: 19554234 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 9 276 14 252 258 72 24.0 3e-12 MVLTAQLTTEWHAWHDARVADLATRFGPLSITDIQWVQPGQSGRWFDLPGEFSFDGTWMH FKVDPGHTVGPTAASLEVTDAPSSSLMAATHSKEGTFSARVSLNTGFNWLLSGDVVVELL NREGYVALRKRDSKAPLLSRFIDVPTFPLDTSWTVQGTFEPFDQPQSHRIGTATPGLDRT ETFPGTVTFELGGQQHTVMVSGSLSSGLYINFYDYTNGTTTPNWRRLNLGVPDHSGGVIL DFNRTVVWPMAFTPYVACPAPVPQNLLPLNVEAGERKPAQTLGESGVNTPVLLVRTGGDI FYEKSLELLRHLGVDVTVADSTGDELLPPLTGYAGLVVVGYDTPEVTGVNEQVMELLSDA TGASVPVVAIGNVATLLSSHEKVAEHPWQASLESTDFSVATFNSEQQVSAGPVYDVTVND VVARDRLFSQVVRYDEGGTSYIPVREIEPVLRKQQTRKKAEAKGTESTEPSTSATLEGQV ASNQGSEHQGSEPQWSTHATWQDLIERFARLVHSQI >gi|294971789|gb|ADNU01000030.1| GENE 28 32418 - 33665 1014 415 aa, chain - ## HITS:1 COG:SMb20338 KEGG:ns NR:ns ## COG: SMb20338 COG0477 # Protein_GI_number: 16264072 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 13 403 17 384 407 72 23.0 2e-12 MIAQLVRIVGWTFFPLALLAKLPFAMSVVAVMTSVSVVTHSYGTAGFAAALVGLGTAVSG PIYGILADKYGQRPVLVFTAVTNAASLLGLGWALRASDSQPNVLLICAAALCIGCTQPQA TSMVRSRWLQALRHNFNDDVPTRVTNTVLSYESMTDELVFVLGPVVVGVIATLAGVVVPL DAAAILTALGVLGIAFHPSSVYSTGRAKARVDDLGDGTPTQPTTAPMGTLLAPRVMVPVA GMLSIGLFFGSMLTSLTSFMETLGRADATGLLYGVMGVTSALFAFSVVALPDRVILVVRW MVAGAIAVAGAAILNLVPGMSGLVIALLVLGTGIGPALVTLYSIAAEVAPTGRTTAVMSM MATAVTVGQATASAVVGNLVDGSGYLMGYVAVAVATGCLLALSFPYVVVQRGRPQ >gi|294971789|gb|ADNU01000030.1| GENE 29 33685 - 35010 902 441 aa, chain + ## HITS:1 COG:Cgl1463 KEGG:ns NR:ns ## COG: Cgl1463 COG1362 # Protein_GI_number: 19552713 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Corynebacterium glutamicum # 15 439 6 418 420 392 50.0 1e-109 MTQTTETLAQNYARDLMRVVKASPSSYHAAAHVRDRLTGQGFEVLDEAQAWDLVPGGRYV IVRDGAVMAFVLPKTVAGTGGSTSGASDAPVFRVIGAHTDSPAFKLAPKSDFTNAGAAQV GVEIYGGPLLNSWLDRELVFAGRLALRDGSTVLASTGPVGRIPQLAIHLDRGVNDGLKLD KQRHTQPVVGLEPVELEKLLAQSAGVDPEDVLGHDIYTCAAQEPALFGAHNEFLASPRLD NLVSVHAGMRAIEKLTDPTDIAVLAAFDHEEVGSGTRSGACGPMLAQVTERIVYGMASAW GYEGHERNTYMRSLAGSVCVSSDTGHAVHPNYPEHHDPRITPLLGRGPLLKLNAQQRYAS DAVGTAVWAQACEDAGVAYQDFVSNNNMPCGSTIGPLTATRLGMTTVDVGAPLWSMHSAR EMIAISDVADTVAVLSAFVRP >gi|294971789|gb|ADNU01000030.1| GENE 30 35156 - 35488 212 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395360|ref|ZP_06805561.1| ## NR: gi|295395360|ref|ZP_06805561.1| possible EP3-2 procyclin [Brevibacterium mcbrellneri ATCC 49030] possible EP3-2 procyclin [Brevibacterium mcbrellneri ATCC 49030] # 67 110 34 77 77 66 100.0 8e-10 TPEPEPSESPDPEPSPSPSETPEPTPEPSPSESVTPTPEPEPTSEPSETPEPSPEPEPSE TPEPEPKSSPGPGALPRTGAQTVGVLVAGGVLLAVGIVATVLSRRSSRSL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:22:54 2011 Seq name: gi|294971779|gb|ADNU01000031.1| Brevibacterium mcbrellneri ATCC 49030 contig00033, whole genome shotgun sequence Length of sequence - 5692 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 8, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 714 540 ## DIP1724 putative surface-anchored membrane protein - Prom 764 - 823 3.3 2 2 Op 1 . + CDS 1041 - 1736 395 ## Ppha_1417 hypothetical protein 3 2 Op 2 . + CDS 1733 - 2260 127 ## HS_0557 phage P1-like protein + Term 2466 - 2502 2.1 - Term 2303 - 2340 -0.5 4 3 Tu 1 . - CDS 2435 - 3046 487 ## COG4889 Predicted helicase 5 4 Tu 1 . - CDS 3253 - 3714 324 ## gi|295395366|ref|ZP_06805566.1| conserved hypothetical protein 6 5 Tu 1 . + CDS 3748 - 4224 362 ## COG2103 Predicted sugar phosphate isomerase + Term 4279 - 4316 3.6 7 6 Tu 1 . - CDS 4169 - 4498 160 ## Mmcs_1255 integrase catalytic subunit + Prom 4478 - 4537 2.6 8 7 Tu 1 . + CDS 4604 - 4771 283 ## gi|295395369|ref|ZP_06805569.1| orotate phosphoribosyltransferase + Term 4859 - 4929 15.5 9 8 Tu 1 . - CDS 4785 - 5690 627 ## COG4823 Abortive infection bacteriophage resistance protein Predicted protein(s) >gi|294971779|gb|ADNU01000031.1| GENE 1 3 - 714 540 237 aa, chain - ## HITS:1 COG:no KEGG:DIP1724 NR:ns ## KEGG: DIP1724 # Name: not_defined # Def: putative surface-anchored membrane protein # Organism: C.diphtheriae # Pathway: not_defined # 5 234 7 229 1075 219 49.0 7e-56 MRALRAACASLATVAITAFSFATVPVFAGPDDDRSVETKAHIDAPKVFWNKASNTFDINS QANGKTAPLDKTANWVGRGYNDDGSQNYIFSVTDDHRLGFLGTNGQLLYMAPQVPGPGNS PIWSGFGADTGVPIEKFRDKNFALELVGFNGPGEMNMFNYSTFGNLPVTRLFSSHDKVSR TVWLDPGTHTHNITTFTKPGRYEVTFDASARTTDGAFTASKPTTLVWRVGGTNPADE >gi|294971779|gb|ADNU01000031.1| GENE 2 1041 - 1736 395 231 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1417 NR:ns ## KEGG: Ppha_1417 # Name: not_defined # Def: hypothetical protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 5 229 6 232 237 259 58.0 7e-68 MSSVNIYCDESTHLPHDAQPFMVLGAVVCPVSCSREANVRLREIRSKHGVRSDFEIKWTK VSPSKVDFYMDAIDYFFDDDDLNFRAVVAPKQGLDHDRFDQTHDDWYYKMLFYLIRNVLP AQNEAFIYLDRKDTNGPEKIDRLRKVIANAEYDFDRRNIRRLQIVESHHVGLLQLADLLI GAVNYANRNDVASEAKLRLIERIRERSGVSLTQTTLLSETKMNIFRWRSQG >gi|294971779|gb|ADNU01000031.1| GENE 3 1733 - 2260 127 175 aa, chain + ## HITS:1 COG:no KEGG:HS_0557 NR:ns ## KEGG: HS_0557 # Name: not_defined # Def: phage P1-like protein # Organism: H.somnus # Pathway: not_defined # 21 168 22 166 173 94 34.0 2e-18 MNPNDRFPLGPYPDNDELTNDKYIEGLYQLFLSNFIYDPLPWKSDGQHVSLRRHPEVEGR HAVFWHIISGGSGAETARKVDMQRCIRLRWVRILVEIFNNEFPEEIDIRWWVDKKRSSNS RYVLTRPEFDYIVVIEQRSTYALLVTAYYAEQKHRRRKLKRVHDEFWQKQEPPTK >gi|294971779|gb|ADNU01000031.1| GENE 4 2435 - 3046 487 203 aa, chain - ## HITS:1 COG:MT2082 KEGG:ns NR:ns ## COG: MT2082 COG4889 # Protein_GI_number: 15841510 # Func_class: R General function prediction only # Function: Predicted helicase # Organism: Mycobacterium tuberculosis CDC1551 # 43 195 1439 1589 1606 171 57.0 1e-42 MADAARHWAAEGITLKPNGRGARISQYRVDLGRLADDFHAATADLKRQLPRIPLPDTSED FGKFVEAGEHLLELHIRYEEQPEYPLGEETVLGDDGDPEFYRVNKLRWGGKARTPDKSQI VVNDNITLTGIPDEAHEYVLGSRSALEWILDRYQVKTDKASGIVNDPNDWGLEHGNPRYI VELIKKVTHVSVETVNACGRYPS >gi|294971779|gb|ADNU01000031.1| GENE 5 3253 - 3714 324 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395366|ref|ZP_06805566.1| ## NR: gi|295395366|ref|ZP_06805566.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 153 1 153 153 207 100.0 2e-52 MIFDANPRWTSEQLVPFLWIILYLGCLLMGLVLAALTMPWPGDRVLAVWVAFGTMLVLCL VLLAIASWWQTKLLRELRRVSPSPWRWIALLAAVVAVVLVLTWATGVQAEASEMLVSLGT MMLTAVLLVPAISVGVHALVKILAARTPDAPTR >gi|294971779|gb|ADNU01000031.1| GENE 6 3748 - 4224 362 158 aa, chain + ## HITS:1 COG:VC0206 KEGG:ns NR:ns ## COG: VC0206 COG2103 # Protein_GI_number: 15640236 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Vibrio cholerae # 62 142 49 129 305 102 60.0 2e-22 MNLSGGTVSGLEEAREPAEAFAFEFDQAGAVAAVKLADDWAKFVEVEEFDFALLYTYAEQ HAQALPQITAATEEVSHRFNDGGGLVYVGAGTSGRLGVLDASECPPTYNTRPEQVVGLIS GGDHALRNATEGAEDDAALGASCSARRGWAHARLAVGP >gi|294971779|gb|ADNU01000031.1| GENE 7 4169 - 4498 160 109 aa, chain - ## HITS:1 COG:no KEGG:Mmcs_1255 NR:ns ## KEGG: Mmcs_1255 # Name: not_defined # Def: integrase catalytic subunit # Organism: Mycobacterium_MCS # Pathway: not_defined # 68 109 288 329 329 65 71.0 5e-10 MCAPEGEWGWEKCQTPKAGRGGEFYTPCSVVRTLVEILEPTEGRVYDVAGDYGTLLTRLE LADYNDDSETERVEAFPEWRHHYNHHRGHTSLKGQLPAARVPNLSGQNS >gi|294971779|gb|ADNU01000031.1| GENE 8 4604 - 4771 283 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395369|ref|ZP_06805569.1| ## NR: gi|295395369|ref|ZP_06805569.1| orotate phosphoribosyltransferase [Brevibacterium mcbrellneri ATCC 49030] orotate phosphoribosyltransferase [Brevibacterium mcbrellneri ATCC 49030] # 1 55 23 77 77 110 100.0 4e-23 MTTWYKIYPLSAQRDFWAVPMWEDKPELGSPTLEDGREVKNVIADGYECDYYRKG >gi|294971779|gb|ADNU01000031.1| GENE 9 4785 - 5690 627 301 aa, chain - ## HITS:1 COG:PM1783 KEGG:ns NR:ns ## COG: PM1783 COG4823 # Protein_GI_number: 15603648 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 2 215 16 228 316 60 24.0 5e-09 KLLQARGLTVTDTASAAEFLSRVNYYRLSGYFRYWQADPMAGNNHFLDGSSFEVIQRLYE AEQDLVAVCDEVLHPIEVLLRTRFAYYYAQRVGAIGKFARGDGFTQSPDPNDERVEEHAL SNLGRSKETFVSHYRDEIKTGCAYSIEAYARMPIWVAVEAFSFGSLSRLIEASSKSGVLH DMAASMNVSPTTLPSQVRSFVYLRNRNAHCAKLWNHAVLDRPGLLSNIARRAKRDHRQFG DHSIYKIFVALDQVATKTGLQKDWLANRVEPILATNALLAAGIATPARYGEMAPKLLTSD R Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:23:52 2011 Seq name: gi|294971693|gb|ADNU01000032.1| Brevibacterium mcbrellneri ATCC 49030 contig00034, whole genome shotgun sequence Length of sequence - 88167 bp Number of predicted genes - 87, with homology - 82 Number of transcription units - 34, operones - 20 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 32/0.000 + CDS 2 - 1978 1955 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 2 1 Op 2 . + CDS 1996 - 2433 564 ## COG0858 Ribosome-binding factor A + Prom 2441 - 2500 4.2 3 2 Op 1 . + CDS 2541 - 3389 711 ## Kfla_0243 SH3 type 3 domain-containing protein 4 2 Op 2 . + CDS 3393 - 4355 508 ## COG0130 Pseudouridine synthase + Term 4357 - 4390 -0.2 5 2 Op 3 . + CDS 4421 - 5044 295 ## Cfla_1836 hypothetical protein 6 2 Op 4 . + CDS 5034 - 5465 424 ## Jden_1331 hypothetical protein 7 2 Op 5 9/0.000 + CDS 5541 - 6491 390 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Term 6539 - 6576 -0.4 + Prom 6526 - 6585 2.0 8 2 Op 6 26/0.000 + CDS 6661 - 6930 384 ## PROTEIN SUPPORTED gi|227495154|ref|ZP_03925470.1| ribosomal protein S15 + Term 6971 - 7027 8.6 9 2 Op 7 4/0.000 + CDS 7155 - 9404 1381 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase 10 2 Op 8 . + CDS 9421 - 10701 916 ## COG0612 Predicted Zn-dependent peptidases + Term 10799 - 10836 1.0 + Prom 10741 - 10800 2.7 11 2 Op 9 . + CDS 10845 - 11471 441 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 11486 - 11534 16.9 12 3 Tu 1 . - CDS 11559 - 12860 950 ## PT7_3473 transporter + Prom 12822 - 12881 3.3 13 4 Op 1 . + CDS 12903 - 13646 669 ## COG0289 Dihydrodipicolinate reductase 14 4 Op 2 . + CDS 13646 - 14098 503 ## Achl_1451 tetratricopeptide TPR_2 repeat protein 15 5 Tu 1 . - CDS 14095 - 15381 1034 ## KRH_05200 hypothetical protein - Prom 15567 - 15626 3.7 16 6 Op 1 9/0.000 + CDS 15474 - 16391 872 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 17 6 Op 2 . + CDS 16450 - 18135 1620 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 18 6 Op 3 . + CDS 18198 - 18824 426 ## COG1396 Predicted transcriptional regulators 19 7 Tu 1 . - CDS 18783 - 19289 447 ## Bcenmc03_3390 hypothetical protein 20 8 Op 1 . - CDS 19405 - 20133 743 ## COG1414 Transcriptional regulator 21 8 Op 2 . - CDS 20143 - 22053 2152 ## COG1620 L-lactate permease - Prom 22248 - 22307 3.8 + Prom 22221 - 22280 3.4 22 9 Op 1 . + CDS 22350 - 23714 1138 ## COG0277 FAD/FMN-containing dehydrogenases 23 9 Op 2 . + CDS 23763 - 24182 263 ## CPS_4893 putative GlcG protein 24 9 Op 3 . + CDS 24255 - 25850 1949 ## COG2225 Malate synthase + Term 25947 - 25990 13.6 25 10 Op 1 . - CDS 25805 - 25999 118 ## 26 10 Op 2 . - CDS 26045 - 26917 431 ## NMO_0950 putative type II restriction endonuclease 27 10 Op 3 . - CDS 26775 - 27053 92 ## Deima_0843 DNA-cytosine methyltransferase (EC:2.1.1.37) 28 11 Tu 1 . - CDS 28174 - 28314 60 ## 29 12 Tu 1 . + CDS 28262 - 29011 564 ## Ndas_0178 hypothetical protein 30 13 Tu 1 . - CDS 29064 - 30551 1080 ## COG4868 Uncharacterized protein conserved in bacteria - Prom 30580 - 30639 4.3 + Prom 30521 - 30580 3.6 31 14 Tu 1 . + CDS 30723 - 31385 577 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 31538 - 31563 -0.5 - Term 31340 - 31382 2.3 32 15 Op 1 15/0.000 - CDS 31401 - 31616 207 ## COG2608 Copper chaperone 33 15 Op 2 . - CDS 31642 - 33594 1769 ## COG2217 Cation transport ATPase 34 15 Op 3 . - CDS 33661 - 33756 83 ## - Term 33838 - 33880 15.6 35 16 Tu 1 . - CDS 33920 - 34762 895 ## cauri_0622 putative secreted protein + Prom 34936 - 34995 2.1 36 17 Op 1 . + CDS 35118 - 38003 2812 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 37 17 Op 2 6/0.000 + CDS 38007 - 38750 253 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 38 17 Op 3 2/0.000 + CDS 38740 - 39255 294 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 39257 - 39297 3.1 39 17 Op 4 . + CDS 39356 - 39682 256 ## COG1396 Predicted transcriptional regulators 40 18 Tu 1 . + CDS 39754 - 39984 226 ## HMPREF0733_11578 hypothetical protein + Term 40075 - 40112 -0.7 41 19 Op 1 14/0.000 + CDS 40173 - 41225 1359 ## COG0468 RecA/RadA recombinase 42 19 Op 2 1/0.000 + CDS 41232 - 41783 483 ## COG2137 Uncharacterized protein conserved in bacteria 43 19 Op 3 . + CDS 41823 - 43289 595 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase 44 19 Op 4 4/0.000 + CDS 43292 - 44194 857 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 45 19 Op 5 . + CDS 44191 - 45093 650 ## COG0253 Diaminopimelate epimerase 46 20 Tu 1 . - CDS 45065 - 45658 446 ## COG2813 16S RNA G1207 methylase RsmC - Prom 45715 - 45774 1.6 47 21 Op 1 . + CDS 45758 - 47233 615 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 48 21 Op 2 . + CDS 47239 - 49317 1141 ## COG1199 Rad3-related DNA helicases + Term 49323 - 49366 -0.8 49 22 Tu 1 . - CDS 49292 - 50176 565 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 50 23 Op 1 . + CDS 50268 - 50558 303 ## gi|295395419|ref|ZP_06805618.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS 51 23 Op 2 13/0.000 + CDS 50568 - 51698 779 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 52 23 Op 3 . + CDS 51695 - 52294 608 ## COG0131 Imidazoleglycerol-phosphate dehydratase 53 23 Op 4 . + CDS 52291 - 52887 556 ## gi|295395422|ref|ZP_06805621.1| conserved hypothetical protein 54 23 Op 5 25/0.000 + CDS 52884 - 53507 543 ## COG0118 Glutamine amidotransferase 55 23 Op 6 . + CDS 53504 - 54247 693 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 56 23 Op 7 . + CDS 54244 - 55050 664 ## AARI_11200 hypothetical protein 57 24 Tu 1 . - CDS 55028 - 56518 1474 ## COG0753 Catalase - Prom 56550 - 56609 2.6 + Prom 56609 - 56668 1.8 58 25 Op 1 4/0.000 + CDS 56815 - 58008 882 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 59 25 Op 2 . + CDS 58100 - 59686 1968 ## COG2978 Putative p-aminobenzoyl-glutamate transporter + Term 59710 - 59748 9.0 60 26 Op 1 . - CDS 59771 - 60211 301 ## gi|295395430|ref|ZP_06805629.1| hypothetical protein HMPREF0183_1127 61 26 Op 2 . - CDS 60141 - 60569 209 ## gi|227540815|ref|ZP_03970864.1| hypothetical protein HMPREF0293_0134 62 27 Tu 1 . - CDS 60695 - 60817 149 ## - Prom 60896 - 60955 6.3 + Prom 60855 - 60914 4.3 63 28 Op 1 . + CDS 60985 - 61983 627 ## COG0523 Putative GTPases (G3E family) 64 28 Op 2 . + CDS 62067 - 62612 448 ## Bacsa_3169 hypothetical protein 65 29 Tu 1 . - CDS 62641 - 63057 216 ## AAur_1611 hypothetical protein - Prom 63174 - 63233 3.0 + Prom 62994 - 63053 1.7 66 30 Op 1 . + CDS 63208 - 63945 672 ## COG0290 Translation initiation factor 3 (IF-3) 67 30 Op 2 . + CDS 64016 - 64222 243 ## PROTEIN SUPPORTED gi|227494077|ref|ZP_03924393.1| ribosomal protein L35 68 30 Op 3 . + CDS 64299 - 64688 552 ## PROTEIN SUPPORTED gi|62422993|ref|ZP_00378167.1| COG0292: Ribosomal protein L20 + Term 64744 - 64782 9.1 69 31 Op 1 . + CDS 65401 - 66570 455 ## plu1875 hypothetical protein 70 31 Op 2 . + CDS 66567 - 66791 100 ## + Term 66917 - 66958 -0.7 + Prom 66902 - 66961 1.6 71 32 Op 1 4/0.000 + CDS 67057 - 67980 208 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 72 32 Op 2 40/0.000 + CDS 68046 - 69092 1223 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 73 32 Op 3 . + CDS 69092 - 71650 2387 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 74 32 Op 4 1/0.000 + CDS 71647 - 72456 814 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 75 32 Op 5 . + CDS 72487 - 74469 1891 ## COG0661 Predicted unusual protein kinase + Term 74648 - 74684 2.4 - Term 74269 - 74304 0.4 76 33 Op 1 . - CDS 74466 - 76076 1547 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 77 33 Op 2 . - CDS 76102 - 77073 970 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 77232 - 77291 2.1 + Prom 77051 - 77110 3.2 78 34 Op 1 11/0.000 + CDS 77130 - 78197 775 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 79 34 Op 2 10/0.000 + CDS 78194 - 79366 1100 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 80 34 Op 3 13/0.000 + CDS 79363 - 80256 870 ## COG0548 Acetylglutamate kinase 81 34 Op 4 9/0.000 + CDS 80253 - 81428 1122 ## COG4992 Ornithine/acetylornithine aminotransferase 82 34 Op 5 4/0.000 + CDS 81425 - 82393 879 ## COG0078 Ornithine carbamoyltransferase 83 34 Op 6 4/0.000 + CDS 82342 - 82950 426 ## COG1438 Arginine repressor 84 34 Op 7 16/0.000 + CDS 82947 - 84155 1337 ## COG0137 Argininosuccinate synthase 85 34 Op 8 . + CDS 84164 - 85597 1367 ## COG0165 Argininosuccinate lyase 86 34 Op 9 . + CDS 85642 - 86934 704 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 87 34 Op 10 . + CDS 86922 - 87989 756 ## COG1266 Predicted metal-dependent membrane protease + Term 88003 - 88041 0.1 Predicted protein(s) >gi|294971693|gb|ADNU01000032.1| GENE 1 2 - 1978 1955 658 aa, chain + ## HITS:1 COG:ML1556 KEGG:ns NR:ns ## COG: ML1556 COG0532 # Protein_GI_number: 15827818 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium leprae # 19 657 289 923 924 757 66.0 0 GGGRPGGRGGRGGRGGTQGAFGRGTGRSKGRKSKRAKRQELEEMQAPVVGGVKVPRGDGE TPLRLRRGSSLADFAEKINTDPTNLVTVLFHLGEMATITQSLDEDTFKILGEELGYKIQI VSPEDEDRELLEAFDIDLDAEAEEDEEDMVPRPPVVTVMGHVDHGKTKLLDAIRSSNVVS GEAGGITQHIGAYQVSVDHEGDKRPITFLDTPGHEAFTAMRARGAKSTDVAILVVAADDG VMPQTIEALNHAQAADVPIVVAVNKIDKDTANPSKVMQQLTEYNLVAEDYGGDTMFVPIS ALQRKGIDDLLEAVLLTTDAALDLKANPDKPARGIAIEAKLDKGRGAVATVLVESGTLRQ GDAIVCGTSFGRVRAMFDENGQQLEEAGPSRPVQVLGLSSVPRAGDSFLVTDDDRTARQI AEKRDAIERNAAQARSRKRISLEDFTKALEEGKVDMLNLILKGDVSGAVEALEDSLLKID VGDEVDLRIIHRGVGAITENDINLATVDNAIVIGFNVRPEAKARDLADAEGVDVRYYSVI YDAIDDIESSLKGMLKPEYEEVHTGSAEIREVFRSSKFGNIAGCMVKDGVIKRNAGARVT RDGVVVGDKLTVESLRRFKDDATEVREGFECGIGLGSFNDIREGDMIETFEMREKPRD >gi|294971693|gb|ADNU01000032.1| GENE 2 1996 - 2433 564 145 aa, chain + ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 1 142 1 146 149 107 44.0 5e-24 MADSTRARKIADRIKVIVAQTLEKRVKDPRLGFITVTDVRVTGDLQNATVFYTVFGDDDQ LAATKAALDSAKGLIRSEVGKGLQIRLTPSLEFVADSVPAAAAELDTFIAKAQESDARVA ELAKNAKPAGEADPYRKPRESEEGV >gi|294971693|gb|ADNU01000032.1| GENE 3 2541 - 3389 711 282 aa, chain + ## HITS:1 COG:no KEGG:Kfla_0243 NR:ns ## KEGG: Kfla_0243 # Name: not_defined # Def: SH3 type 3 domain-containing protein # Organism: K.flavida # Pathway: not_defined # 164 281 194 312 319 114 52.0 5e-24 MGKHSASQKSKTSVSDFMWAVVGAKPRGRRMDDKATTATGVMRSVRRRPMLAAVVVPVAA GAALVTTATMVAGGNDSQDSQVVAESHAPENKEQDFTASEGISVDGKDQDMSAFASGLSK VEAKSAPEETKSASSGSSSSSGSAKSAGAGGGDSVDPGSSDKPVSGAPCGVSASIESGLT PNAISAYRAVCANFPQVKSYGGRRNDPGSDHNNGQAVDAMIRGQVGDEITAFLIKNRKEL NIKYVIWEQKIYAPYTGWKGRPMENRGGDTANHFDHVHISVN >gi|294971693|gb|ADNU01000032.1| GENE 4 3393 - 4355 508 320 aa, chain + ## HITS:1 COG:Cgl1933 KEGG:ns NR:ns ## COG: Cgl1933 COG0130 # Protein_GI_number: 19553183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Corynebacterium glutamicum # 1 280 1 264 297 221 46.0 1e-57 MGAPGPTGILVVDKPGGMSSHAVVSRVRKWFGTSKVGHAGTLDPMATGVLVLGLGKGTKL LTYLVGADKRYSATIRLGASTPTDDADSAPDRFAPANAVRGLDQASIARGVERLTGPIEQ VPSAVSAIKVDGKRAYDLVRAGQDVQLKARQVTVSRFDVSVPELVACEYEGSPACECVDL EASVDCSSGTYIRALARDLGDSLGVYGHLTRLRRERVGPFTLDQAVDVPSYEALGEGVAP VPLVSLAEVASAVLPPVELSREQAIDVAHGKFIDARAGSGGQLCAALYQETLVGILEPRA GGRALKVATGFAQPSDFHNP >gi|294971693|gb|ADNU01000032.1| GENE 5 4421 - 5044 295 207 aa, chain + ## HITS:1 COG:no KEGG:Cfla_1836 NR:ns ## KEGG: Cfla_1836 # Name: not_defined # Def: hypothetical protein # Organism: C.flavigena # Pathway: not_defined # 1 198 1 195 197 134 47.0 2e-30 MFVLTVDQQGSRTARDRVPELLSALKGVPTVLPFVRTVGDEAQAVLDSASHVVHACIGIA RASKWSVGIGIGEVEKPLPDSSDQARGEAFIAARGAVEAAKNSWSPLCVHTATSREEVIR DSHDAQTVLRLLFDLIARATDTQWRVIDAFRDAPSPSQADIAQSLGISQQAVSKSLRAGR AAGIMEAIDCAERLLHRAHQPWETHAH >gi|294971693|gb|ADNU01000032.1| GENE 6 5034 - 5465 424 143 aa, chain + ## HITS:1 COG:no KEGG:Jden_1331 NR:ns ## KEGG: Jden_1331 # Name: not_defined # Def: hypothetical protein # Organism: J.denitrificans # Pathway: not_defined # 13 139 11 126 131 63 36.0 2e-09 MLIDLLIATGAALLAAAVGVPVTSGVLRLAAREDGAGESDLGELESDEGATPETNTDAQP DASTGVMRGGLMIGVLERALAAAAVALGRGEVLAVIIAVKGLGRIPELKSSRAAGERFII GTFASLGVACGVGAVAFWLAQVV >gi|294971693|gb|ADNU01000032.1| GENE 7 5541 - 6491 390 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 15 305 19 308 317 154 32 1e-36 MEVIRSADEAAHLCALTLGNFDGVHIGHQAVLRTLVRVADERGLTSLAMTFDPHPVAVHR PDHKPQLITGLDEKLKRIAATGVDATLVQPYSLEFADQSAEEFIEFLARDVGVRAIVVGR DVRFGRGNEGDLATLQNLGQRHGVETVVAIDDLGDGEGLSRVSSTHIRSLLLDGNVEDAA RMLGRPHVVTGTVVNGNARGREMGFPTANIGGDVAGLIPSDGVYAGWVYFADGRQQPGAI SVGSNPTFDGDDRRVEVNVVGVEFPDMDVYGEPARVEFVAHIRGQIEFSGMDALIEQMRD DVKNVSAVLEAERQKA >gi|294971693|gb|ADNU01000032.1| GENE 8 6661 - 6930 384 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227495154|ref|ZP_03925470.1| ribosomal protein S15 [Actinomyces coleocanis DSM 15436] # 1 89 1 89 89 152 83 6e-36 MALDPKVKQEIIKEYATHEGDTGSPEVQVAVLSRRISDLTEHFKTHKHDHHSRRGLLLLV GQRRRLLKYLADTDIERYRSLIARLGLRR >gi|294971693|gb|ADNU01000032.1| GENE 9 7155 - 9404 1381 749 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 24 749 6 714 714 536 43 1e-151 MNGDILGINPETAVAVIDNGKFGKHEIEFGTGRLAQQAAGCATATLDGETTLLSATAVSK NPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPTTDAILACRLIDRPLRPSFVKGLR NEVQIVVTVLSMHPDHLYDTLAINAASMSTQLGGLPFSGPIGGVRIALIDDQWVAFPNYS QLENAVFDMAVAGRVVGDDVAIMMVEAEASENSWDLIQGGARKPTEEVVAEGLEAAKPFI RELVRAQQELADRVAKPTAEFELFKDYEDDVYEAVRELAWDKQTQNFQIADKQEREAAGD ELLDSLLNDLGEKFEGRESEIVGALNSMTKEIVRKRILTERVRIDGRGIKDIRPLSAETN ILPRVHGSALFERGETQIMGVTTLDMLKMEQQIDSLTPVTSKRYIHHYNFPPYSTGETGR VGSPKRREIGHGALAERALVPVIPSREDFPYAIRQVSEALGSNGSTSMGSVCASTMSLLS AGVPLRAPVAGIAMGLVSDVIETDQGKQTAYAALTDILGAEDAFGDMDFKVAGTKDFITA IQLDTKLDGIPASVLAAALKQAREARLTILDVLTAAIAEPGEMAPTAPRIITVNIPVDKI GEVIGPKGKMINQIQEDTGADISIEDDGTVFIGATDGPAAEAARSAINAIANPQVPEVGE RYLGTVVKLMSFGAFVSLTPGKDGLLHISELKKLNGGKRVEDAEDVLGVGQKIQVEITKV DDRGKLSLQPVIDEDAESSEEAKEEANED >gi|294971693|gb|ADNU01000032.1| GENE 10 9421 - 10701 916 426 aa, chain + ## HITS:1 COG:Rv2782c KEGG:ns NR:ns ## COG: Rv2782c COG0612 # Protein_GI_number: 15609919 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Mycobacterium tuberculosis H37Rv # 15 424 17 427 438 273 39.0 5e-73 MLTETLLGEGSGIYRTTLPNGIRVISETIPGIQSETVGVWVGSGSRDETDDNAGSTHFLE HMLFKGTATRSAKDIARTFDRTGGEANAMTAKECTAYYSRCLVADLPDVCATLWDMVLAS TLAVAEFERERTVILDELAMGADDPEDVLFEAYDELIYADSPLGRPVGATKERIQALAYD ELQHHYKEAYVGPRLIFSAAGGADHEDLVDLVWRATQHLPEATAPVGTTSGRVTPVFSPG ERHIARPTEQQSLIMGVAGLHDGHDDRFTLTVLASLLGGGMSSRLFQTVREERGLAYAVH TTGSQYSDVGDFGIYAGCAPAVAQQVVDLCVEQCQRLASEGPMAAEVADTAAQVSAATVL GMESTAIRMNRLAKSELSNRPLVDAAELVERVRGVTAEDVQALAQRLFGGPWALCSLGPA DNVRLK >gi|294971693|gb|ADNU01000032.1| GENE 11 10845 - 11471 441 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 7 199 5 201 201 174 46 1e-42 MVEQYTLPDLPYDYAALEPHISAKIMELHHDKHHATYVKGANTALEQMAEAREKGDFSTI GKLSKDLSFNLGGHVNHSIFWNNMSPDGGDKPEGELAAAIDDQFGGFDKFQGQFTGVATS IQGSGWAILGWDMLGQRLTIEQLYDQQGNVQVGYVPLLQLDMWEHAFYLDYQNVKPDYVK AWWNVVNWEDVAARFDRARNQTKDVLLG >gi|294971693|gb|ADNU01000032.1| GENE 12 11559 - 12860 950 433 aa, chain - ## HITS:1 COG:no KEGG:PT7_3473 NR:ns ## KEGG: PT7_3473 # Name: not_defined # Def: transporter # Organism: Pusillimonas_T7-7 # Pathway: not_defined # 2 412 8 380 399 156 30.0 2e-36 MYKQLFWPVYAPSLLFHTGLGATLPVYVLGALSVGATPAFASLIVAIMGIIQLTFAVPAG MLIDRIGDRATMLIATSLITAVSGVTVFSLIAGPGVLGASVAVALYAASLFLRAPSEAVW TLARQSFITRNVPTHFIGRAMTALGGTIRVGNLVGPLAGAVLVMVFPLWSVFVFATVCAA VAVALLYSPVGSSEGRDSAEVSHTRAAIETDASTEASAPKEEDATEVADTSGGASPRLRG VNWTAVILAGLPVMVLMGLRIVQPVIVQLWGHSIGLSEAVVSLLIALGAAIELVIMFPGG YAKDRLGRAPTLIACVSIFGAGFLALVVWPHVTGAFVAVVIMALGNGLGAGINMTIGADL CPAENRGRFLGIWSLFSNTGRVGGPAVVSAFVTFATLGAGIVAIGLAGIAGAVWMAVFAK KIGLPSRVRRTSL >gi|294971693|gb|ADNU01000032.1| GENE 13 12903 - 13646 669 247 aa, chain + ## HITS:1 COG:Cgl1927 KEGG:ns NR:ns ## COG: Cgl1927 COG0289 # Protein_GI_number: 19553177 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Corynebacterium glutamicum # 4 247 3 246 248 232 52.0 5e-61 MSNIRVAVLGAHGRMGSHAVRALEAADGIEVVATLGSSDPLEQVVESGAQVAVELTVPRA TEDNVRFLVSNDIHTVVGTTGWDDDRLSRLEDLCAEHPQVGVLIAPNFSIGAVLAMQFAE MAAPYFDSAEVIEIHHTRKLDAPSGTAVSTAKRIAAQRAQAGLPPVPDATESDPHGARGA VIDGIHVHAVRQVGMNASEEIHFGSAHEALTIRTDSHSTEAFMPGIVQAVNAVADHPGLT VGLEKYL >gi|294971693|gb|ADNU01000032.1| GENE 14 13646 - 14098 503 150 aa, chain + ## HITS:1 COG:no KEGG:Achl_1451 NR:ns ## KEGG: Achl_1451 # Name: not_defined # Def: tetratricopeptide TPR_2 repeat protein # Organism: A.chlorophenolicus # Pathway: not_defined # 2 143 11 152 159 176 61.0 3e-43 MSKAKIGAIIMVVLLGAYLVVMVNRGWILLTDPQLIAKIMGVALFVFPVIAVWAIVRELF FGASMERLAKILEKEGGLPPDNLPRTPGGRIVREAADKEFEKYRAEAEADPENWRSWFRL SCAYDASGDRKRARATMRKAIKLHAETEKR >gi|294971693|gb|ADNU01000032.1| GENE 15 14095 - 15381 1034 428 aa, chain - ## HITS:1 COG:no KEGG:KRH_05200 NR:ns ## KEGG: KRH_05200 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 26 428 8 393 402 170 35.0 1e-40 MVFPAEGFGTSRSSRSFGNVVVNRLAPANRNIGLDTARGIAIFGMIATHIVPLVTVAGEA TSASIFAGRASALFAVIAGISIILSTRSALEDGGWARAAAGLFTRGLCIVVLGLILGLFT THVAVILVNYGIMFMIATLFLRAGPRTLGVLAFLWVIVTPLISFMVRSHFQLSQAFEIPN LFMLAEPGYLLTAIGLTGYYPVLQWLGYILIGMALGHLNWYRSVTCWSAVAVGAGLAVLA KAFSWLLMTASPAGFFALQESALDNYDKTLDELLITGTHGVTPTDTWSWLTVSAPHTGTT LDLAGTIGVALAVIGVCCLISNALGSFGTTFEQNPTHQLCEGPGRVWLFFLSAPGAMPLT IYSGHVVFLEITQQFPLGPWPEYALHIYVAVFAAVLWKVFVLPRGPLEQVLSLASSGVAR LVPARTGS >gi|294971693|gb|ADNU01000032.1| GENE 16 15474 - 16391 872 305 aa, chain + ## HITS:1 COG:Cgl1925 KEGG:ns NR:ns ## COG: Cgl1925 COG0329 # Protein_GI_number: 19553175 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Corynebacterium glutamicum # 9 299 7 295 301 251 49.0 1e-66 MAMIHSAYAQRAQDAFGTVGTAMITPFSPNGAVDYDAVQVVANYLVQQGNDMLVVSGTTG ESPTTTDEEKGQLLKVVRSAVGEHVKIVAGVGTNVTAHSIELAQQAQSAGADGLLVVTPY YSKPSQDSIRAHVEMIADSTELPVMLYDIPGRSGVPMETETLIRMGEHPRVLAVKDAKGD IAASMDVMTRSDLVYYSGEDALNLPLMSAGAIGLVSVVGHVAAKDLARMVDAVHNNDLMQ ARHVAENLVPIVDAVMNHMPGVVSVKAALELAGIIQYRGTRMPLLPATEEQVEFLRSKLG EFINP >gi|294971693|gb|ADNU01000032.1| GENE 17 16450 - 18135 1620 561 aa, chain + ## HITS:1 COG:ML1512 KEGG:ns NR:ns ## COG: ML1512 COG0595 # Protein_GI_number: 15827796 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Mycobacterium leprae # 8 561 5 558 558 557 52.0 1e-158 MIDLLSELSDPPKADPEALRIVALGGLGEVGRNMTVFEYRGKILVIDCGVLFPEEEQPGI DLILPDFSYLDGRADDVVGIVLTHGHEDHIGAVPYLLKKLGDVPILGSTLTLALVEAKLK EHRIRATTRIVAEDDKDQLGPFDLEFVAVNHSIPDALAVCVRTGAGTILHTGDFKMDQLP LDGRITDLRSFARLGEEGVDLFLTDSTNADVPGFTSMEKDIGAVLEAQFGRAERRIIVAS FASHVHRVQQVLEAASAHGRKVALVGRSMVRNMKIAQELGYLNVPPGVLIDIKHVDSLPD DQVVLMCTGSQGEPMAALSRMANGSHRVTVNEGDMVVLASSLIPGNETAVFRVINGLMKL GATVIHKGNAKVHVSGHASAGELLYAYNIVKPRGVMPVHGEWRHMLANAKLAIDTGVPED HVVVADDGWVVDLKDGKARVVGAVDCDYVFVDGSSVGTVTESDLQDRRILAGEGFVSIFM TVDKSDKRVLAGPVIHTRGVAESDRVFDTIKPKIEKAVADALDDGVVDEHKLQQIIRRTI GRWISSKLRRKPMIVPMVVIV >gi|294971693|gb|ADNU01000032.1| GENE 18 18198 - 18824 426 208 aa, chain + ## HITS:1 COG:PA4499 KEGG:ns NR:ns ## COG: PA4499 COG1396 # Protein_GI_number: 15599695 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 15 178 6 175 187 66 29.0 3e-11 MRDEHGSVEDVLAGVGPRLRRIRQARELTLGDVADSTSISVSTLSRLESGERKPTLELLL ALSGLYDLPLDDLVGAPPVGDPRVYQRPVSRGGITVVPLTHFPGPQHALKMVIPSTRSVP HLCRHKGYEWLYVLSGELRLIVGSHDVVLTAGQAAEFDTTTLHWFGSTGESPVEILSLLG LQGQRIHLSSVMQAESRTATNDSPNDAP >gi|294971693|gb|ADNU01000032.1| GENE 19 18783 - 19289 447 168 aa, chain - ## HITS:1 COG:no KEGG:Bcenmc03_3390 NR:ns ## KEGG: Bcenmc03_3390 # Name: not_defined # Def: hypothetical protein # Organism: B.cenocepacia_MC0-3 # Pathway: not_defined # 8 165 7 165 165 136 47.0 3e-31 MRIGFGELIQASAVGIGATITMDAVAEVLRRTRGVRSLDYAMVGRWIGHMRNGKFAHASI MHAEPVPHEKEIGWVAHYAIGTGFAVALAVADPGWLKRPRFDTAVLWGVGTVAAPWLLMQ PGFGMGVAASKIPNPAQARMGSLRAHASYGAGLWLSGRIVRTIVRRCS >gi|294971693|gb|ADNU01000032.1| GENE 20 19405 - 20133 743 242 aa, chain - ## HITS:1 COG:mll0250 KEGG:ns NR:ns ## COG: mll0250 COG1414 # Protein_GI_number: 13470521 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 2 242 22 271 273 111 29.0 9e-25 MATIQSVNRMLDVLETMRSMGGVARSVDIANALDIPAPTIHRIVSNLAARGYVTQLTDKR YALGPALVSLGTEAAKQSGYTIQPVLDKLAHTLGETVNLAYFTNDVMTYVAQATSQRSMR MFTQVGAHVPVWGSGVGKAVLATMPDEQVHTILDNVRLPRLLSRDALLEDLTACRKNGYA LDDEEQEVGVRCLAVYVPGAPSLAGLSVSSPTSRLGPEKYGDVADTLHTAAQQLTRRWAG SH >gi|294971693|gb|ADNU01000032.1| GENE 21 20143 - 22053 2152 636 aa, chain - ## HITS:1 COG:BH1831 KEGG:ns NR:ns ## COG: BH1831 COG1620 # Protein_GI_number: 15614394 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Bacillus halodurans # 3 601 2 581 594 473 48.0 1e-133 MDSLGVQALLAILPIVIAGTLLLGFRLPAVIAMPVGLVASAAVAFFAWGISGTTIMASVI QGILVAIGLLWIVFGALLLLATITKSGAIDTIRSGFIAVSPDRRVQVVIVAWLFGSFIEG AAGFGTPAAVVAPLMLALGFPAMAAVLAGLLIQSTPVSFGAVGTPMITGIGKGIFDSGIE ATNGLKERLTELGIPVDNVTVAQDMFVSHTAAQVALIHAVCGIFIPLLLSCFMTGFFGEN KSFAAGLKVAPFAIFAALAFILPYLAVATFMGPEFPSLIGGLIGLAIVVPAAKAGFLAPR DTWDFANRAAWPQQWMGTMRPQAEAANIKKRMPLFQAWLPYLLVVALLLITRNVPAVKKF LAQDAVLTVKDILGQEGLSQKMDLLYSPGAIFLVVCLMTYALHRMSAKQIAESWKIAGGQ IAGAAFALLCSLPMVRVFINSGPAFNDSGLDSMPVTLATAAANAMGPNWPLLAPFIGALG AFVAGSNTVSNNMFSQFQFATGAGIGAPSPETVVAVQAVGGAAGNMVSVHNVVAAAATVG LLGKEGHIIRKTIIPMAVYSLLAGSVAYMWVWGIGFNLGTIAFVICLAGIATAIALAAKQ KPAPNDSLVTPGSEQAAFPELAEVAPGSSAPRSEER >gi|294971693|gb|ADNU01000032.1| GENE 22 22350 - 23714 1138 454 aa, chain + ## HITS:1 COG:MT1296 KEGG:ns NR:ns ## COG: MT1296 COG0277 # Protein_GI_number: 15840703 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 1 449 5 453 455 551 63.0 1e-156 MLDELAQQLPAGVLITNPDTMEAYRRDRANDPNAGMPVAVVRATEVEHVQTAIKFAAKHN IPVVPRGAGSGLSGGSTAVDGCIVISVDKMNNIDIDPVTRTAVVQPGAINNEVKVAAAEH GLWYPPDPASFQFCSIGGNIATNAGGLCCVKYGVTTDYVLGLEVVLPDGRLVKLGGPRLK DVAGLSLTKLFVGSEGTLGIIVSITLRLIPAQRQPTTLVATFPTLEGTMNAVLEITRKMR PSMLEFMDDVCINAVEDQMKMGLDRSVKAMLVVQSDEPAQYATEEIQLVEVICNRNGASE CYYTADPDEGEMFAAARRAAIPAVEMTGTILLEDVGVPIPRLGDLVVGIEEISKNRDVTV AVMAHAGDGNTHPLVVFDPTDKDQEERAHIAYGEIMDLAMRLGGTITGEHGVGKLKQPWL TNYLGDDVLDLNHRIKKAIDPQGIMNPGSCFVMG >gi|294971693|gb|ADNU01000032.1| GENE 23 23763 - 24182 263 139 aa, chain + ## HITS:1 COG:no KEGG:CPS_4893 NR:ns ## KEGG: CPS_4893 # Name: not_defined # Def: putative GlcG protein # Organism: C.psychrerythraea # Pathway: not_defined # 6 129 3 133 143 71 35.0 1e-11 MSAYTTVNVVTHETAARAVALTLDEGEKLGLTLCATVVDPSLGLVAYGRADGMTPHSVET SKRKAQTAASTRKPSAAILPELATKLELGSGGILTSIAGGVPLSFDGVHVGGLGVAGGKP AEDAQVAQAVLARLGADSQ >gi|294971693|gb|ADNU01000032.1| GENE 24 24255 - 25850 1949 531 aa, chain + ## HITS:1 COG:RSc1363 KEGG:ns NR:ns ## COG: RSc1363 COG2225 # Protein_GI_number: 17546082 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Ralstonia solanacearum # 4 530 5 529 529 570 55.0 1e-162 MATKLDLPQGMEFTAEVADEHLKVLTADALELIAELHRKFESERQARLAARKEVQKFLDE GGELDFLQETAHIREDAEWQVAAPAPGLEDRRVEVTGPTYRKMTINALNSGAKAWLADQE DANTPAWESVLGGQVNLLDAINREIDFVAEETGKEYKLRPDEELPTIIVRPRGWHMTEKH ILVDGEPVSGSLVDFALYFATAGRRQIEKGLGPYFYLPKMESYLEARLWNDVFVYAQNKL GVAQGTIRATCLIETYPAAFQMEEILYELREHSSGLNAGRWDYIFSVIKTHRNKGEDFVT PDRAAVTMTVPFMRAYTELLVRTCHKRGAHAIGGMSAFIPSKDEAANKKAYEQVTNDKTR EANDGFDGSWVAHPGMVDTCKDAFTKVLGDKPNQIDKKREDVNVTAVDLLAVKDTPGDIT DAGLRANISVGIQYVQSWLNGNGAAAINGLMEDAATAEISRTQVWQWIQAGSTVSDTGEV VTKELVRSLVDEEVAKLPAGDWEAATKLFVDMATDDTYHDFLTLPAYELLP >gi|294971693|gb|ADNU01000032.1| GENE 25 25805 - 25999 118 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAPHMKAGPATHVTEPALSQTRAAPTEAPPAEATPTGATPLPPTAATVPYGRSSYAGRV RKSW >gi|294971693|gb|ADNU01000032.1| GENE 26 26045 - 26917 431 290 aa, chain - ## HITS:1 COG:no KEGG:NMO_0950 NR:ns ## KEGG: NMO_0950 # Name: not_defined # Def: putative type II restriction endonuclease # Organism: N.meningitidis_alpha14 # Pathway: not_defined # 11 290 8 286 286 285 52.0 2e-75 MELNQTTLKAERQAFHALLIANGTLAINKAGVPSNADKSQKSSIKFASEIARLLKVETVG ERLAGQTVGGQFEAAVMSFLERTFPLLNTLRPGSWRFTNLGGKRRGAGMSDYVPFRHLDE LARAIEASPTLQSVLGNAYVISPDVLVSRLPEPDERIEQGGLLMSDDVGRYTPVREANQP HPILHAVVSCKWTLRSDRAQNARSEALNLVRNRKGRLPHIVVVTGEPTPSRISSLALGTG DIDCVYHFALPEMIEAVTKSGNDEALNLLMSMVNGERLRDIADLPLDLAV >gi|294971693|gb|ADNU01000032.1| GENE 27 26775 - 27053 92 92 aa, chain - ## HITS:1 COG:no KEGG:Deima_0843 NR:ns ## KEGG: Deima_0843 # Name: not_defined # Def: DNA-cytosine methyltransferase (EC:2.1.1.37) # Organism: D.maricopensis # Pathway: Cysteine and methionine metabolism [PATH:dmr00270]; Metabolic pathways [PATH:dmr01100] # 1 45 269 313 326 70 73.0 3e-11 MAALVQGFPTEWRIAGRKTSAYRQVGNAFPPPVAKAIGTRIAEALNGTQPNNAESGATSI SRPSDRQRNFGDKQSGRPVKCRQEPEVVNQIR >gi|294971693|gb|ADNU01000032.1| GENE 28 28174 - 28314 60 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGRVRSHAMMPKAIKHTIISDASTILYVREFGSNTALPTFNFQDG >gi|294971693|gb|ADNU01000032.1| GENE 29 28262 - 29011 564 249 aa, chain + ## HITS:1 COG:no KEGG:Ndas_0178 NR:ns ## KEGG: Ndas_0178 # Name: not_defined # Def: hypothetical protein # Organism: N.dassonvillei # Pathway: not_defined # 103 245 119 261 270 155 52.0 1e-36 MCFIALGIIAWDLTRPNMGTVSTQPQTQATQNTPTPTPVATEEPTQTATTSAAPKPSPTP EPTKAKDRDFNTDDIPRKGSQKWNVSEKLSPINHKGKDFRVYIRIEKDLPFDVDETTARI MKTLQDERGWQKVDNVRFIQVTSPKRANVTINVATPGTVDKMCAPLRTLGKLSCHNGNNV MYNADRWVDATDEFDDLEQYRDYLINHEVGHALGHGHKSCPGKGKPAPLMQQQTKGLQGC KPNGWPSVA >gi|294971693|gb|ADNU01000032.1| GENE 30 29064 - 30551 1080 495 aa, chain - ## HITS:1 COG:Cgl2942 KEGG:ns NR:ns ## COG: Cgl2942 COG4868 # Protein_GI_number: 19554192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 495 1 495 495 737 72.0 0 MKTGFDRERYIEMQSEHIRKRRDQIGGKLYLEMGGKLFDDNHASRVLPGFTPDNKIEMLQ RIADDIEIVIAMNAQDLHRHKVRADLGISYEEDVLRLVDVFRERGFLVNWVVVTQMDEEN TLAQAFIDRLERLGLRVAKHRTIPGYPTNVSRIVSDEGFGLNEYVETERDVVVLTAPGPG SGKLATCLSQIYHDFKRGIQSGYAKFETFPIWNLPLEHPVNLAYESATVDLNDMNVIDPF HLQAYGERVTSYNRDVEVFPLLKTLLETLAGSSPYQSPTDMGVNMAGYCITDDEVCRETS KKEIVRRYYKALVDEARNDWDNTLSERAAIVMSKARATTDDLRVVAPALKLEAETGAPAS CMELADGTLVTGKTSDLLGCSAAMLLNALKHLAGIDPDVHLLSPESIKPIQTVKTKHLGS LNPRLHTDEVLIALSVSAETSEDSRRAIDQLSQLRGCNVHTTTILGSVDEGIFRSLDMQV TSEPKYQRKSLFHRR >gi|294971693|gb|ADNU01000032.1| GENE 31 30723 - 31385 577 220 aa, chain + ## HITS:1 COG:L0239 KEGG:ns NR:ns ## COG: L0239 COG0664 # Protein_GI_number: 15673985 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Lactococcus lactis # 6 215 8 217 222 120 31.0 2e-27 MALPICVASVPIFQNLDHQGQESIASRLQHVHLQAGEALAMPGDPGALRVVRSGRIRQSR ITANGSEQLLRVLSHGQFTGELAVLTGQPEQVMSVALTDSEVCVLSAADLREILVTHPKV SIEMIAEVSTRLARSEDQLTQITGRSVSARLGEYLAGLAEAAKGAAFELPMAKKDLASFL GTTPETLSRTLRTFADKGLISQSGRRITVKEPRRLMLLDS >gi|294971693|gb|ADNU01000032.1| GENE 32 31401 - 31616 207 71 aa, chain - ## HITS:1 COG:Cgl1149 KEGG:ns NR:ns ## COG: Cgl1149 COG2608 # Protein_GI_number: 19552399 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Corynebacterium glutamicum # 1 68 7 74 78 60 39.0 9e-10 MTTTTFRTEPFTCPSCVAKIETAVGRVDGVEKVDVKFNSSRVVVDHEEARASAASIRKII DDLGYPVKSVS >gi|294971693|gb|ADNU01000032.1| GENE 33 31642 - 33594 1769 650 aa, chain - ## HITS:1 COG:L63697 KEGG:ns NR:ns ## COG: L63697 COG2217 # Protein_GI_number: 15673984 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 56 636 37 618 625 454 42.0 1e-127 MTSKARARISLISGALLVLALVAWGIAQWVDEPALSAVSGWAFATGDIPIVSWRSLQMVS LLGAALTAGWPIAKTALQALRYKTFSIDLLVTIAVTGALVIGELVEAGVVAFLFVFGSWI EARSMERTRRSVSDLIDMAPQEADVIRDGETVTVPASGVKVGEHVVVRTGSRVPVDGTVV DGRGHIDESTITGEPVPALKDDSDSVFSGTIVADGFLTIRAEHVGSDTAFSRIIELVEDA QDSKSSTQRFLDRFSRWYTPTIIVLAVVAFLVTFDAHFALTFLVIACPGALVISTPVSMV AGIGNGARHGVLLKGGDAVERLTAVDTLVVDKTGTLTHGRPTVVEVVGISSDAHEVLRLA AAVETASEHPLGTAVVKATAEVSLSTVSDVRVHAGSGISGTVEGTEVAVGSRRLVNEYCV TLGSWEKKAQELETAGATVFFVIVAGKLAGMIAVADTIRPEAKALSQLHEWGIRDIVMLT GDNPRTATAVARELGIDQVKAELLPEHKVDAVQELTAQGRKVAMIGDGINDAPAIAAAHV GIAMGTGTDVSIDTADVVLAGGRFDQLVHARQLVQATVRNVRQNTFIALATVVALLVGVV AGAVFMSVGMLVHEASVLVVVLNAVRLVRFKAKIRKLDADQGEKSTVELN >gi|294971693|gb|ADNU01000032.1| GENE 34 33661 - 33756 83 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGRFWTENVNKTNKSGLYSTLLIKDCRENGS >gi|294971693|gb|ADNU01000032.1| GENE 35 33920 - 34762 895 280 aa, chain - ## HITS:1 COG:no KEGG:cauri_0622 NR:ns ## KEGG: cauri_0622 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 280 81 460 460 202 37.0 1e-50 MKDSWAPVGTISTNNKTKSPIPLTQSTSRSQTISLTVNGSKSESTEFNMGGTQQYCKPNG TWPNPTAWTAFAPIKNEVRVRMYDNPSGAEGGKGTGKPVDRVVETKEPLVPKVSTTKPAK QAKHDLEPRLTVAAGKAPGYAGLVALRVKNVGSDTYYQEFPQTSFLVKVKTDKGPKGVDR LITPGHFNGAYTRDLGFDKKTSTRTFQVTLSNAIEPGEETLVANLNFGDGKTKLGRISNY IEVSHADRLKDDTTGYNDYKKDSRKGVTLTDGGKKNAGVF >gi|294971693|gb|ADNU01000032.1| GENE 36 35118 - 38003 2812 961 aa, chain + ## HITS:1 COG:ML0977 KEGG:ns NR:ns ## COG: ML0977 COG1674 # Protein_GI_number: 15827463 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium leprae # 371 895 349 886 886 631 63.0 1e-180 MATSTTSPATGTGRRKRGAPTQATEPAGEKQKTNPVTGTWMGMSRMAGDRARKAFSEDPE TPTRRDGTGFFLIGLAVVVAAFEWWNIPGVFGNAVRGVFEGTFGRVALVLPVVFVLYAVR LFMRGNETRQNNRILVGTIALLVSAAGLAHIAAGNPSFVNSREAMANGGGALGYIVSSPI VTAATVYVAVPILVLVALFSVLVITATPVVKVPERLVGLYNRLTGGTAEPATGADEEDDT NVDLVATNQRTSTLKPLGRKRRSKKADGEETTRAYDKATIDDTSGKHAEAAPPAAEDAPT RVLNSEIYDVDQDVDEPKYKPGQRRPTKAEREAAKLKRDQGLDATLPGETADVKSQEEAA TRAIDRKPDPENTVPTVNTPAPVATGELPQRVEQLELAGDVTYTLPASDLLTAGPPPKER SEANDRVVEALREVFEQFKISAAVTGFSRGPTVTRYEIELEPGTKVEKVTALEKNIAYAV ASADVRILSPIPGRKAIGIEIPNADRETVALGDVLRSQAARGTDKPMVVGVGKDVEGGFV VADLAKMPHLLVAGATGSGKSSFVNSMITSIMMRATPDEVRMILVDPKRVELTIYEGIPH LITPIITNPKKAAEALEWVVREMDARYDDLAHFGFKHVREFNQAVREGRLTPPPGSERKL QPYPYLLVVVDELADLMMVAPRDVEASIQRITQLARAAGIHLVLATQRPSVDVVTGLIKA NVPSRLAFATSSLADSRVILDMPGAEKLIGQGDALFLPMGKSKPMRVQGSWVNESEIEEV VKHVKTQLAPNYREDVQATAPKKQIDEEIGDDMDVLLQAAELVITTQFGSTSMLQRKLRV GFAKAGRLMDLMESRGIVGPSEGSKARDVLVKPDDLASTLAFIRGDAPPEGSSADAGGVE GADGDQGNAPYAQAAEVVNPGDANSAGDGGAGELKAGDIDPETGLEVVEASSEDAWGLTG R >gi|294971693|gb|ADNU01000032.1| GENE 37 38007 - 38750 253 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 43 222 484 668 904 102 32 9e-21 MVDKLGFMSTPDRKQGQPETTSATHKDSTPAAAKRTRMQHVPNALTVLRIVMVPVFAVLL LMHGGQDPTLRWWALAIFLLAMLTDKLDGDIARKYDIVSDFGKLADPIADKALMAAAFIG LAIVGALPWWVPVVILVREIGITVMRMFMLKYEVMPASRGGKIKTVLQTATVALYIAALP LAVVTSAGFMFAYAIFAGFALTLTILVTVITGVDYVVQAQKIKKEAGQGKVAGANPTTAS GEAPNDR >gi|294971693|gb|ADNU01000032.1| GENE 38 38740 - 39255 294 171 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 23 147 766 891 904 117 50 2e-25 MTVDPGNLPTRVIHAYMQRGLTVATCESLTAGLVAGTLATVPGASKVLRGGLVTYATELK TALAGVDAELLKKFGAVDAEVARQMARGARRACTADVAVACTGVAGPDPQDGKPVGTVFV AVATRDGEDVREHAFEGDRASIRRQTVDACCEALLRIISCRLSSNPVEDHQ >gi|294971693|gb|ADNU01000032.1| GENE 39 39356 - 39682 256 108 aa, chain + ## HITS:1 COG:MT2816 KEGG:ns NR:ns ## COG: MT2816 COG1396 # Protein_GI_number: 15842285 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 3 78 4 79 112 76 60.0 1e-14 MTLLRTEIGDTLRVARRRQSRTLRDVSTDARVSLGYLSEIERGQKEASSELLASICEALD MPVSVLLREVADKIALSEGVLVPDTVPDNFEEIDVPPEVAKRAFAQQR >gi|294971693|gb|ADNU01000032.1| GENE 40 39754 - 39984 226 76 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0733_11578 NR:ns ## KEGG: HMPREF0733_11578 # Name: not_defined # Def: hypothetical protein # Organism: R.dentocariosa # Pathway: not_defined # 1 71 2 72 74 74 53.0 1e-12 MRHSVYWELMNDEFGSIRAASLHTDLALSSLGSLTAQEALEQGEDPKVVWLAVCDAAGVP ESRRLGTDKKPHSNPF >gi|294971693|gb|ADNU01000032.1| GENE 41 40173 - 41225 1359 350 aa, chain + ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 12 338 15 341 376 493 76.0 1e-139 MATKSNNTNVSADNKQKALETALSQVERQYGKGSIMRLGSQERQPIEAIPTGSLALDVAL GIGGLPRGRVIEVYGPESSGKTTVALHAVANAQKAGGLAAFIDAEHALDPEYAAKLGVDT DQLLVSQPDTGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLM SQALRKITGALAHSKTTAIFINQLREKVGVFFGSPETTSGGKALKFYASVRLDVRRIETL KEGTDAVGNKTRVKVVKNKVAPPFKQAEFDIIYGQGISREGSIIDMGVENGIVRKSGSWF TYDGDQLGQGKENVRNFLRDNPELADEIETKILMKLGIIEDEAEEQKPQE >gi|294971693|gb|ADNU01000032.1| GENE 42 41232 - 41783 483 183 aa, chain + ## HITS:1 COG:Cgl1909 KEGG:ns NR:ns ## COG: Cgl1909 COG2137 # Protein_GI_number: 19553159 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 181 21 207 215 96 39.0 2e-20 MSSAHLIESLQQSIDQIEAQGAQPEPDPLAHDPEYKQTKKRALNILSARDYSVDELRKKL LAREHPEDAVERVLTKLQRAGLLNDQEYAQNYVRVHREKRNLSTSALRRELVKRGVADNH IRFALDQVEDEHEVAFGVALKKARSTVGLPREKRMRRILAMLARRGFPQSISMDVTLRAL DET >gi|294971693|gb|ADNU01000032.1| GENE 43 41823 - 43289 595 488 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 11 442 23 459 462 233 31 2e-60 MTDVLNRTYEVKTYGCQMNVHDSERLSGLLDDAGYTPAEPNEQADVVVFNTCAVRENADN RLYGNLGRLAEVKETHPELQIAVGGCMAQKDRDTIVERAPWVDVVFGTHNMGSLPVLLER ARHNKEAQVEIKESLEVFPSTLPTRRESTHSGWVSISVGCNNTCTFCIVPHLRGKEKDRR PGDILAEVEALAAQGVIEVTLLGQNVNSYGTEFRDRQAFGKLLRAVGKVQGIERVRFTSP HPAAFSDDVIDAMAETPTVMPQLHMPLQSGSDTVLKAMRRSYRTKRFMGILDKVRERIPH ASITTDIIVGFPGETEEDFQQTMDVVREARFTQAYTFQYSIRPGTPAAAMENQIPKDVVQ ERFERLVALQDEIAWEENKACVGNQVEVLINTGPDAQHGRMSGRARDNRLVHVRAQEGLD ARPGDIVTATVTEAKPYFLISDSDYTVRRTPAGDAWDLSQAESCGATGGAASSGPTNLGL PTIRVGAN >gi|294971693|gb|ADNU01000032.1| GENE 44 43292 - 44194 857 300 aa, chain + ## HITS:1 COG:Cgl1899 KEGG:ns NR:ns ## COG: Cgl1899 COG0324 # Protein_GI_number: 19553149 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Corynebacterium glutamicum # 1 290 2 293 301 241 46.0 9e-64 MTVINVVGATATGKSDLAITLAHHLDGEIINADSMQFYRGMDIGTAKVSPEQQAEVPHHL LDILEVTQDASVSEYQSRARALIDEIHQRGRTPIIVGGSGLYVRAATDVMNFPGTDPAMR ARLEGIAEAGALHDMYAMLEELDPKAASTIKPTDARRIVRALEVIALTGDTFSSELPEYT YYTPTIQVGLAQDRETLHQRIADRVHLMWDAGWVDEVRTLLDQGLRDGKTARHAIGYAQI IDYLDGNMTADLAIDSTVTRTRQFAKRQETWFRRDPRIHWFDAADPHTSKNALNYIKETA >gi|294971693|gb|ADNU01000032.1| GENE 45 44191 - 45093 650 300 aa, chain + ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 6 288 7 269 277 174 43.0 1e-43 MIDGQLVKGHGTANDFVLLHDPNGEHELDPARVRELADRRTGIGGDGVIRVIRSEALGEE AGDVAHGAGAEWFMDYRNADGSIAEMCGNGVRVFAHYLRTYGLVQDQSFAVGTRAGIKHV TVIPDPLGGDTPWYKVDMGKWQLPGGGEAFDATVETTGVRVARPGLTVDMGNPHTVVALA HAEELQAAKLHEPPHVEPTPPAGTNVEYIVIEPDNDPTTGTLRMRVHERGVGETYACGTG ACASALAAYVWAGRGPQAPTTWTVHQPGGAVRIEITGETVALSGPAVITYEVTPRELPNS >gi|294971693|gb|ADNU01000032.1| GENE 46 45065 - 45658 446 197 aa, chain - ## HITS:1 COG:BS_ybxB KEGG:ns NR:ns ## COG: BS_ybxB COG2813 # Protein_GI_number: 16077174 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Bacillus subtilis # 2 167 14 179 201 110 38.0 2e-24 MSKPRTITVRLAGRDVDVTTDAGVFSPSRLDPGTTVLLKNLPAPPAGDILDLGCGWGPIS LQAGLEARDDDTEVRVWALDVNERSLSLTRENAKAAGLTSVTPVLAQDIPDSVQFSAIWS NPPIRVGKDVLHELLLTWLPRLVPGGEAWLVVSKNLGADSLATWMSENLPGAWDVRREAS AKGFRVLVVRNLEVPEV >gi|294971693|gb|ADNU01000032.1| GENE 47 45758 - 47233 615 491 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 75 461 21 407 425 241 39 9e-63 MQSDKHREMIDRVLSRASDSLTEDHLASDDYSQLDLIEREALRRVSGLSTELEDITEVEY RQIRLENVVLAGVYSGSSEEAETSLRELAALAETAGSRVLDGVLQRRDTPDPSTYLGRGK AQELAEIVASVGADTVITDTELAPSQRRALEDVVKVKVIDRVALILDIFAQHAKSREGKA QVELAQLEYLLPRLRGWGESMSRQAGGRVAGGAGIGSRGPGETKIELDRRRIRTRMAKLR REIKAMAPARETKRSNRTRNKVPSVAIVGYTNAGKSSLLNRLTDAGVMVKNELFATLDPT VRQAHTADGRVFTYTDTVGFVRNLPHQLVEAFRSTLEEAADADLLLHIVDASHTDPLAQI KAVHEVLDEAQTIDIPELIVFNKADIADSDTLARVLNTYPNAVVVSAHTGQGIDELRERI DDLLPRPSHHITALVPFDRGDLIARAHDEGTVESEKYTAQGTLLVAMVDPDLLHELEQFR QPDMVDPQTFG >gi|294971693|gb|ADNU01000032.1| GENE 48 47239 - 49317 1141 692 aa, chain + ## HITS:1 COG:Cgl2468 KEGG:ns NR:ns ## COG: Cgl2468 COG1199 # Protein_GI_number: 19553718 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Corynebacterium glutamicum # 1 654 15 664 665 514 46.0 1e-145 MSTDVEQLLEAAVDALGGTHREGQSTMAQAVSSALDNQTHLLVQAGTGTGKSLGYLVPSV EYALRTGDRVIISTATLALQSQIIQRDLPRLAKTVGSVTGRKPTSAVLKGRRNYVCLHKL GGGYPGDEESALFDVGADIEGRRGGSMTATEAEIARIREWADVTATGDRDDLVPGVSDRT WSLVSVNSFDCLGSTCPMFEECFAERAKNTAADADIVVTNHALLAIEAQGEQTVLPEHSA VVIDEAHELRDRVTGALTGAVTHALLSAVASTVKKHTAATADTIQALTKASDQFAAALEE HDPGLLRVWPEDLGDALSAVHDALRDLSSQVGPASKESEPDAGRHMARARLDEAFELVER LLDRNSNDVAWISTNTFKETTTISLMVAPLSVAGTLRNGLFAESTVVATSATLALGGKFE PVAAALGLAGEEAPRYDAIDVGSPFDYQKQGILYVAGHLPKPGRSGVNVQVLDEIVELIE ASRGGALGLFSSRRAAEEAAQYVRERTRYQVYLQGEDTLSVLVRDFAADDSAVLFGTMSL WQGVDVPGLTNRLVLIDRIPFPRPDDPLSQARTQAAAARGANGFMAVSATHAALRLAQGA GRLIRTSQDRGVVALLDSRARTAGYSTFLLDSLPPLWRTTHSGVVKQALERLATGVVATG TAETATGEAGAQGADAAAGKISEDSTRDESRQ >gi|294971693|gb|ADNU01000032.1| GENE 49 49292 - 50176 565 294 aa, chain - ## HITS:1 COG:MT2793 KEGG:ns NR:ns ## COG: MT2793 COG1974 # Protein_GI_number: 15842258 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium tuberculosis CDC1551 # 85 294 5 217 217 239 56.0 4e-63 MCENRFERDLIYLHVRLSQEGLTQFLDQTFDQVRRPNSHTLGGKVAEKAKRGRGRPRNES VIADIQEQESMHSRSLPEDSVSRTDRRLTPRQRQVLECIEHAVYTNGYPPSMREIGQAAG LASLSSVAHQLNQLERLGYVRRDPKRPRALEVVNPNEIEYNDKMTPETSANTALVPVVGR IAAGGPITAEQHVEDVFALPRQVVGSGEMFLVQVVGDSMIDAAICDGDWVVVRKQSTANN GEIVAALLDNEATVKTLKREGGKQWLLPQNKDYEPIDGDHALIMGLVTAVIRRV >gi|294971693|gb|ADNU01000032.1| GENE 50 50268 - 50558 303 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395419|ref|ZP_06805618.1| ## NR: gi|295395419|ref|ZP_06805618.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS [Brevibacterium mcbrellneri ATCC 49030] D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS [Brevibacterium mcbrellneri ATCC 49030] # 1 96 2 97 97 144 100.0 2e-33 MRVARIYAFRRLVVVAALVVAAFAITLAVLPAQASENENAAPTVTVTVKADQSLWTIARE HGGGEPTDKVVKQIQAINGLEGSLVRPGQKLEVPSR >gi|294971693|gb|ADNU01000032.1| GENE 51 50568 - 51698 779 376 aa, chain + ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 2 367 6 363 366 338 49.0 9e-93 MVENLPVRSDLRGAKPYGAPVHDVPVRLNVNENSYDVPPAVVEALQKNIGEQLQHLNRYP DREFTRLRELLSQYLSTVLQKQGNGALTQIPPEWIWAANGSNEVLSHIVQAFGGPGRTGL GFEPSYSMHPLITTSTGATWIKASRNADFTLDVDTAVREVREHKPDVTFICTPNNPTGCS TPLEVVEAVLQETEGIVIVDEAYAEFARPGFQTALDRLPDNPRLVVSRTMSKAFAFAGAR VGYAVAHPDFIDVLRLVRLPYHLSSLTQAAACAALEHTPALLANVERLIESRNAMSQALT GLGYSVVPSDSNFLMFGNITDPQAMFEELLAHGVLVRNNGIPGHLRVNAGTDFETTEFIR AITEVTRTHPHLQGQA >gi|294971693|gb|ADNU01000032.1| GENE 52 51695 - 52294 608 199 aa, chain + ## HITS:1 COG:Cgl2047 KEGG:ns NR:ns ## COG: Cgl2047 COG0131 # Protein_GI_number: 19553297 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Corynebacterium glutamicum # 3 199 6 202 202 219 57.0 3e-57 MTRTATVTRTTSESDVTVTLNLDGAGTSTVSTGVPFFDHMLTALSKHSCIDMDINASGDT HIDVHHTVEDTSIVIGQALKEALGTKAGIRRYGHAYVPLDESLARAVVDISGRPYFVHSG EPEGQQYHLIGGHFTGSMVGHALESLSVSAGLTTHVTLLAGRDPHHIAEAQFKAFARALR TAVEPDPRTDAIPSTKGAL >gi|294971693|gb|ADNU01000032.1| GENE 53 52291 - 52887 556 198 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395422|ref|ZP_06805621.1| ## NR: gi|295395422|ref|ZP_06805621.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 198 1 198 198 353 100.0 3e-96 MSRTVIVTPFGLPKQLAAACKLNNIDGYVVPVGDFSAVVQQSSSTEEGNRAASAISKLAG KHEVLLLTRADEHIDAGHYRNGKREADVPAGLALNNLPEIVEKVLLESVEPENAEGAINV TAMSRYEASAATMTPERAALARTALLWMVVALVGFIGIVLGALVALNINPIAWAGVVVAS LIFGFSLYRINALLARRS >gi|294971693|gb|ADNU01000032.1| GENE 54 52884 - 53507 543 207 aa, chain + ## HITS:1 COG:MT1638 KEGG:ns NR:ns ## COG: MT1638 COG0118 # Protein_GI_number: 15841055 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 4 198 6 203 206 213 56.0 2e-55 MTQVVVLDYGSGNVRSAVRALESAGAHVTLTSGRDAALEAEGLVIPGVGAFNAVMEALER VEGHDIVRTRHQQNKPTLGICVGQQILFQSGTEHGITTSGVALWPGTVTHLNAPVVPHMG WNTVTPAPGSAMFAGVENEHFYFVHSYAAHTPVPGALNTTSTHGEQFIAAVEDGPTWATQ FHPEKSGDAGLTLLTNWLKHVRSKEKQ >gi|294971693|gb|ADNU01000032.1| GENE 55 53504 - 54247 693 247 aa, chain + ## HITS:1 COG:ML1261 KEGG:ns NR:ns ## COG: ML1261 COG0106 # Protein_GI_number: 15827647 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mycobacterium leprae # 10 244 4 242 245 277 60.0 1e-74 MTNLVDSAKLTLLPAVDVSDGRAVRLVQGEAGTETEYGSPIEVAGTFEEQGAEWIHLVDL DAAFGRGSNQKLLEQVTKSLSIKVEVSGGIRDTESLERALDTGAERVNIGTAALENPEWT AQVINDYGDKVAVGLDVRGTTLAARGWTRDGGDLWEVLATLEEAGCSRYVVTDVTKDGTL RGPNTELLRQIAERTQKPLVASGGISSLDDIAALRELVPVGVDSAIVGKALYAGKFTLPE ALDVASE >gi|294971693|gb|ADNU01000032.1| GENE 56 54244 - 55050 664 268 aa, chain + ## HITS:1 COG:no KEGG:AARI_11200 NR:ns ## KEGG: AARI_11200 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 17 265 26 291 293 133 35.0 6e-30 MSQKHERESGGMGETPANTADSAGTPWAGRDLKPNPFSGDTGEADQELLDALAAVHTNPF EPALHQKVIGALREKRVYAPVLPTAVEHTTDERGLVHDNKSEMAMVRLAAADGRECTPAF TDIPALTGWHAKARPVPTQAERLGAAAVEEGAQLVVLDPGSDRAFLIRRPALWAWLQGKD WMPAWANPQVVNAVAHVAGRHSWIESVAVGVGSANVLTSGPEVSLTVRVNREPQPQEVQA FNGELSQTEHVVELVDSLTMSFTDAQRA >gi|294971693|gb|ADNU01000032.1| GENE 57 55028 - 56518 1474 496 aa, chain - ## HITS:1 COG:Cgl0256 KEGG:ns NR:ns ## COG: Cgl0256 COG0753 # Protein_GI_number: 19551506 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Corynebacterium glutamicum # 5 493 23 516 516 503 51.0 1e-142 MENFTTNDFGIPVGSDRHSLTLGPDGPILLQDHYLIEKLAHFDRERVPERVVHAKGGGAF GTFTVTDDVSSFTRAAVFQPGTKTEVLARFSTVAGEQGSPDTWRDPRGFALKFYTTEGNL DIVGNNTPVFFIRDAIQFPDFIHSQKRRSDSGLRDNTMQWDFWTQNPASAHQVTYLMGDR GVPRSWREQNGYGSHTFQWINAQGERFWVKYHFISQQKPAFIEKYGHEGFSQDEADQMAS VDADFHRRDLFEAIQEGNFPSWDLEVQVIPYEEGLNYHTNIFDVTKTVSKKDYPRIKVGT LTLNRNPEDFFAEIEQAAFSPSSLVPGTGLSPDKMLMGRLFSYPDTHRHRIGPNYAQLPV NKPRAATKRSYSRDGAMTHENYPKEMGEYATNTYGGPQADPARVTELNITAFSGDAVRAA ATLRENDGDFNQAGDLVRNVLDDAARDRLVGNIAGHVMAVTDDQLLPRIFQYWRNVDAEL GARVESVVTATRAERQ >gi|294971693|gb|ADNU01000032.1| GENE 58 56815 - 58008 882 397 aa, chain + ## HITS:1 COG:Cgl0102 KEGG:ns NR:ns ## COG: Cgl0102 COG1473 # Protein_GI_number: 19551352 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 1 396 52 461 462 416 52.0 1e-116 MVKQELDNVTDDLHQLSARIHQLAETAFEERESAQAIVELLRAHGIDAQTGVYGVETAVL AEVGDGGRTIGILAEYDALPEIGHACGHNVICATGVGAFLVLARAHAKAQLPGKVVLLGT PAEEGHTGKEYMAREGAFDSLDAAIMLHGYGYDCADQVWLGRRTLTVTYKGVPAHASAQP FMGRNALDAAIMFYQGLGLLRQQMPPIDRIHAVIPEGGTRPSIVTEEAQVQVYVRSKFPE TLKDLSERVHDVAQGAALMTGTGVEMQWDVHPPSLPIRTNQPLTDRWVKHQNTVGRSPLP AGVLDESIAASTDFGNVSYRVPGIHPLLKISDESAALHTRAFEAASGSESALQGVVDGAY GLAMTAADFLFDDELAASVTADFEAAGGRMDVPNFFN >gi|294971693|gb|ADNU01000032.1| GENE 59 58100 - 59686 1968 528 aa, chain + ## HITS:1 COG:Cgl0101 KEGG:ns NR:ns ## COG: Cgl0101 COG2978 # Protein_GI_number: 19551351 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Corynebacterium glutamicum # 16 528 25 536 538 631 68.0 1e-180 MSSATNSTKDAKPSLSVRMLEGVEKVGNKLPEPFTLFLVLFLLTGVVSTAMAMAGVSVEV PGKEGPETIAIKGLFTGEGLAWFTTMLGDNYIGFPPLVTVLPILLAVGVAEKTGMLAAMV RVAFGSSPRWLLPYAVGVVGVTGSIMADSAFVVIPPLAALVFKAAGRHPVAGLLGGFAAV GAGYSTALVPTSLDALFAGITTSVMNTLPGQEYAAVNPVSNYWFNIASSIALAIVCGFII SRVLEPQLERINSPREKVEDAEAVEGEGEELSQYLKPAEKKALIASLIFGAILTVILLWA VLIPNSPWRNEDGGFLPQSPLLSSIAFIVFIYFMGMGVVYGVVVKTVTKMADVVDMMGKA LIDMISFLVLAFILGQFIALFNWTGIGSWIAVTGAEGLKAANLTGFPVIIGFILLASVLN LFIISGSSMWTIMAGVFVPMFALIGLEPAFVQAAFRVGDSATQVITPLNPYMIVILGLLR RYEPEAGIGTLVSRMLPFVIPFWITWAALLAVWYFLDLPLGPGNGIFL >gi|294971693|gb|ADNU01000032.1| GENE 60 59771 - 60211 301 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395430|ref|ZP_06805629.1| ## NR: gi|295395430|ref|ZP_06805629.1| hypothetical protein HMPREF0183_1127 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1127 [Brevibacterium mcbrellneri ATCC 49030] # 1 146 1 146 146 273 100.0 3e-72 MSEVKKRHYSARTAVAQLFRSFLDENGERARLMERLGVKTMPVIIPALGDTLASNIREAA NRHFQTGEQRVVVPVCLPVRSTKTMKLFILVVSTHDTKTFWQLDMNELHDSVEMAQVVET LDPSKKWEIEDLDSQQQELKDLAASI >gi|294971693|gb|ADNU01000032.1| GENE 61 60141 - 60569 209 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227540815|ref|ZP_03970864.1| ## NR: gi|227540815|ref|ZP_03970864.1| hypothetical protein HMPREF0293_0134 [Corynebacterium glucuronolyticum ATCC 51866] hypothetical protein HMPREF0293_0134 [Corynebacterium glucuronolyticum ATCC 51866] # 1 102 1 102 162 120 53.0 3e-26 MPPNINKKNYRLADMSLSPDDAVPYPDPDETAEVIEDRIDMAEFGTVLHVREWRGSDDTV EQFALMLNVTPEHEAYNRCRQLKGGMANFEQVRRTDTWHSTIMRCCIRLSTLSVGRPVNN ERSEKTTLQRAYGGCATVSFVP >gi|294971693|gb|ADNU01000032.1| GENE 62 60695 - 60817 149 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVRASLRSIKNQKGAQVVKRKGRIYVINKQNPRMKARQK >gi|294971693|gb|ADNU01000032.1| GENE 63 60985 - 61983 627 332 aa, chain + ## HITS:1 COG:PA5535 KEGG:ns NR:ns ## COG: PA5535 COG0523 # Protein_GI_number: 15600728 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Pseudomonas aeruginosa # 186 328 235 396 400 82 31.0 1e-15 MTLLPVVAVVGRSPDARYLTATDIAHNLGYRYSPIGSADPVTAGSRLIDSLPELGTHPGI VVDYPHSAQVEDIIGSLSRPDVELRAVVVAVEARALLDDLASDIDVHHVRFEHGMPLDDC TPACQCAAGCIEYATHICLVGEKPFEWEMAQALLSHLNPTARIIWNDNESISATIHSTLP ISPELAMPGWVQLLNSSHTPPCTHPRVTSFLYENLRPFHPARLHSAFDRVITSGMCGTVI RVAGFVRLASRPGITGLWSNTGPAVSLEPAARDTPDQQLAFGQELGITGVDLHTAELRAV LDTATLTDSELLDGVQAWENYTDPFPEWVLDH >gi|294971693|gb|ADNU01000032.1| GENE 64 62067 - 62612 448 181 aa, chain + ## HITS:1 COG:no KEGG:Bacsa_3169 NR:ns ## KEGG: Bacsa_3169 # Name: not_defined # Def: hypothetical protein # Organism: B.salanitronis # Pathway: not_defined # 2 177 6 173 173 67 29.0 2e-10 MLNPIQLISHVGTRFQTPSGDRSIRFGDSAEQVREVLGRPEDGSTDSILYFHAACTQVHL GSNGVEFMEFGTNPKKDGVDVEWEGHNLSRINAIECAEMLMKLNDGARIDESEAPASYAF EKLGLTVWQPYALQDALDGLREAETGGNEDELEPLKEDVDIAEFFDSVGIGSQEYMKGYF S >gi|294971693|gb|ADNU01000032.1| GENE 65 62641 - 63057 216 138 aa, chain - ## HITS:1 COG:no KEGG:AAur_1611 NR:ns ## KEGG: AAur_1611 # Name: not_defined # Def: hypothetical protein # Organism: A.aurescens # Pathway: not_defined # 29 138 102 208 208 150 75.0 1e-35 MYVKIMGMTTHSFDNSHIPADQTSDAEQQALRDIADVPAVEIVSSAAVHLMSAAAVKCGL AEDTPESSGRDLQDLDEARKLITALAGLVTAASTEVGDHHARPLRDGLRSLQLAFREAST IPDAPGKGPGEKFTGPVS >gi|294971693|gb|ADNU01000032.1| GENE 66 63208 - 63945 672 245 aa, chain + ## HITS:1 COG:Cgl1345 KEGG:ns NR:ns ## COG: Cgl1345 COG0290 # Protein_GI_number: 19552595 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 3 (IF-3) # Organism: Corynebacterium glutamicum # 36 204 16 185 189 211 70.0 1e-54 MQMDTFVKAIMWAPFVQRGAFFCAPLVNNHLEKEQHISEPRINDRIRVPEVRLVGPNGEQ VGIVAIRKALDLARSADLDLVEVAPQAKPPVVKLMDYGKFKYESAQKAREARKNQANMAL KEIRFRLKIDDHDYETKKGHVSRFLSGGDKVKVMIMFRGREQSRPEMGMKLLNKLADEVA DLGTVESAPRVDGRNMVMVIAPVKSKADAKAESRRATKGAKGTKAEVKSRRERAAQAKAE AREEA >gi|294971693|gb|ADNU01000032.1| GENE 67 64016 - 64222 243 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227494077|ref|ZP_03924393.1| ribosomal protein L35 [Mobiluncus curtisii ATCC 43063] # 1 64 1 64 64 98 71 1e-19 MPKMKTHSGTKKRVRVTGSGKIMREGVGNRHLAEHKSSKRKRQISQDQVLAPGDAAKAKK LLGKFKGR >gi|294971693|gb|ADNU01000032.1| GENE 68 64299 - 64688 552 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62422993|ref|ZP_00378167.1| COG0292: Ribosomal protein L20 [Brevibacterium linens BL2] # 1 129 1 129 129 217 86 2e-55 MARVKRAINAKKKRRVILERAKGYRGQRSRLYRKAKEQVIHSLVYSYRDRRQRKGDFRRL WIQRINAGARANGMTYNRFIQGLKAAQVEVDRRMLAELAVNDPAVFTSLVEVAKSALPAD VNAPNNNAA >gi|294971693|gb|ADNU01000032.1| GENE 69 65401 - 66570 455 389 aa, chain + ## HITS:1 COG:no KEGG:plu1875 NR:ns ## KEGG: plu1875 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 380 27 402 412 127 29.0 6e-28 MQGLALIFSVFSATKSSILVGIVGATAYLPGVIASIVFRSVVDRKGTERHLSISNFILVV GSLVLLLSQVMSASLTAYVATVLLVQSSLSIVKAFNKAFVGRIIRLKFPGVEGALVLQKS TALGIVGGLVGAGCAGLLIDVVGVVWCFALTCALYGLSLCFANVALSHKDSRHRFGVHDR INRGVDRSAAERKIETSGGNLSRIMVIVLMFTVPSSAFLPYIDTMIAPLADLLVDGSTAS YLSVLSVSVSVGGVVAGACLSFGAVSLVSILKWSLPLASVSCFAFVFVRSPFIAPILLFL CAFFGTVNVLAMQVLTNQAPTPSRVGSFTLLRNAFAGLAKAGASLLAGVLISVSGVTLAW SVAACCLLLVGGCWFFGVRDDEVRDVLGK >gi|294971693|gb|ADNU01000032.1| GENE 70 66567 - 66791 100 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIEQVLNVSQEKMHDWFSTKREQELPSVLRIDVSSLQSMVRMADTHRAFFGNQVLTVSLG TESLRRAGALTYTV >gi|294971693|gb|ADNU01000032.1| GENE 71 67057 - 67980 208 307 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 87 302 28 244 255 84 26 1e-15 MSDAAHSHAPATNLTGPPLTPQSKRLREAAKLTKRSWRTKMGRFIVEGPQAVREALTHQA TNKPHRATVGVEDGQTRSRPTGAILDVWATSDAAERHPDILEHAQAANIPIREATSAALA ELTDTVTSQDIVAIVEHIDTELPQAITKDSKLVVVLSQVRDPGNAGTVLRVADAAGADSV IFTNSSVDVYNPKTVRATAGSLFHLPVVTGVGLPEVVELARARGLQVLAADAHPPAHDLH VPWDTGLDLSQPTAWVFGNEAWGLPEKDRKQADSAVAIPLYGQAESLNLATAAAVCLYES ARNHNYA >gi|294971693|gb|ADNU01000032.1| GENE 72 68046 - 69092 1223 348 aa, chain + ## HITS:1 COG:Cgl1356 KEGG:ns NR:ns ## COG: Cgl1356 COG0016 # Protein_GI_number: 19552606 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Corynebacterium glutamicum # 9 346 6 343 345 448 61.0 1e-126 MSEHACDPLDEASVTAAVETALHTFEAAHTLDELKDAKIAHMGDKSPLALANREIGKLDK SQKAQAGKLVGQSRGRVNKAFAARLATLEAERDAQVLVEEAIDVTLPTNRAQTGARHPLT LLQEQIADHFVGHGWEVAQGPEIEHEWFNFDSLNFGPDHPARQMQDTFFADPKESGLVLR THTSPVQSRSLLERGVPLYVVCPGKTFRTDELDATHTPVFHQVEGIAIDKGLTMANLKGT LDEFARAMFGPESHTRLRPSYFPFTEPSAEMDFWFPNKVGGPGWIEWGGCGMVHPNVLRA AGIDPDVYQGFAFGMGIERTLMLKEGINDMHDMVEGDLRFSHTFGVMD >gi|294971693|gb|ADNU01000032.1| GENE 73 69092 - 71650 2387 852 aa, chain + ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 157 851 1 672 673 512 43.0 1e-144 MRVSLEWLSDYVDLSASPDAHELAAQFASIGLEEEDFFGPEVTGPLVVARVLSLEKEKHS NGKTINWCSVDVGEDEPRGIVCGAHNFVEGDLVVACLPGAVLPGNFEIAARKTYGHVSDG MICSLRELGLGEDHDGIIVLKDLGLTGEPGDDAIKLLGLDHTTLDVNVTPDRGYQLSMRG IAREYALLKNQTFNDPANIDVPAPSLDGYRVDLEDTAPIHGQHGCSRFTAMRVDGIDAQG SSPYWMQKRLLEAGMRPLSLVVDITNYVMLELGQPLHAYDADKLGSKITVRRARAGEKLT TLDDVERKLHPEDLLITDNYAGTPAGDPEQDFNEAHYGQRVIGLAGVMGGEATEVSETTT SVIIEAAHFDKVTIARTARRHKLPSEAARRFERGVDPHLGPAAAMRCAQLIHELAGGTIA PEMTVVGSVPEPTVIPLLADAAAKRVGVDYTSEQVENALTAVGCKVDHAVDGQSTLAVTV PSWRPDLTGPEDLIEEIARVNGYDQIPSVAPQAPGGSGLTHRQKALRTVSNLLAHVGLTE VLTYPFTADTRSDALLLEADDPRRTMVRLANPMADDQPLLRSHLLATLPDAVNKNLGRGF KDVFVFETGLVTQPEAQATATGTFAPGYHPTEEELATLRSAVPPQPLHAAAVMTGKIERL GVWGKGRNVEATDAIDLVHRIAGVLGLTLDVRSSQTAPFHPGRCAEFTLGDTVVGHAGEL HPKAIENLGLPARTCAFEVDLDVLFAHSLERAWDGALSTYPVSRQDVALIVDESVPAADL ARALREGAGPELEDLDIFDLYTGDQVGEGKKSIAFRMTFRAADRTLTADEASALRVKATD NAHAKFGVEVRS >gi|294971693|gb|ADNU01000032.1| GENE 74 71647 - 72456 814 269 aa, chain + ## HITS:1 COG:VNG0364G KEGG:ns NR:ns ## COG: VNG0364G COG1028 # Protein_GI_number: 15789624 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Halobacterium sp. NRC-1 # 3 198 4 179 273 85 34.0 1e-16 MTIALITGGTRGIGNYLVRGFLTAGHRVIFTATDASRASAHAAELATELGIEHGDRVHGE GVDVTDPKAIETLLSRVREVEAETGDDLGVLINNAGVIEAPEGPVWDVPPEQLERTITTN VLGPFYMIRAFAPYLLSKAEAHKPARIIDINSGSGSHGTPQYAAYSASKVALFRLADSVH HYGYDKGLRIFELAPGVIRSDMTTSMPVHDWRGDDDWTKPQDVIDLALGFVSGELDSFSG RFARAGHDTVESLKAMNLTEDYRRLRLTL >gi|294971693|gb|ADNU01000032.1| GENE 75 72487 - 74469 1891 660 aa, chain + ## HITS:1 COG:MA1861 KEGG:ns NR:ns ## COG: MA1861 COG0661 # Protein_GI_number: 20090711 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Methanosarcina acetivorans str.C2A # 118 640 8 551 559 208 28.0 2e-53 MQTIVWTILLGLLNAVVVGVLVRRVVSVGTGALRNTIVSLVMGMSLWPITLQAFEILKIY DHGSFPGPEMGFAAIMVFLLLFGWFVVIQITLLLGIEIIIPSGSLTNVVRSLTRIPVRYR RMRRLAQIQRILIRFGLVRYLRPRVPSFRLNMREIAKTTAEAFAAAGVTFVKLGQFIATR ADAVPTVFVEEFSKLQSDVPAVDFAEVESDLEEEWGRGVDEVFASFDRTPLAAASVAQVH RAVMHDGTEVVVKVQRPKIRAQVRADSDIVVTLATQIERMAGWARKMGIVRLAENFVDAL NDELDYRGEVGNMKLLRESALESGSTLMRIPRVFEELSGPNVIVMEHVHGKVLSKAGPIV NTLSTIARYELAEELFTMIARQVLVDGVFHSDLHPGNIIIEPSGRGGLIDFGAVGRIDRR DRQDIAVLLMAFDSQNSRAATHAVLDMLGTPSGVDVRVLQRDIGEILMSLSGNGSVSSAI DEMLEFFLRGGFSLPGSIAQALRALATLESSIAYIDPDINMLDLARTKASGILRESLSLE TVRKDSELYALTTSSLALDLPAQVSRVVRHLEDGSLDIGTSGVDLSAIKGLVRNVVDKGV QTVLATALILGGVVMMSADFGPPLTPELKLFTYFGAWVLLTGCVLGALVLAPSLRHEPDT >gi|294971693|gb|ADNU01000032.1| GENE 76 74466 - 76076 1547 536 aa, chain - ## HITS:1 COG:PA4977 KEGG:ns NR:ns ## COG: PA4977 COG0028 # Protein_GI_number: 15600170 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Pseudomonas aeruginosa # 3 527 29 553 559 266 37.0 1e-70 MSTLSTGGAVLTAIRNYGVDTVFGIPGTHNLEFYRSLKDLGTRVVTTRHEQGAGYGSDGW SLQTGLPGVVITTSGPGLLNALSAAATSFCESRPMLILAPGPEQGAEFADKGTLHETKDQ FSAAAAIVETAVRATSASEAVEAVHAAFERFATARPRPTYIEVPLDVLEQQVEADSLDLE ARTYQRPRCTDEALLEQARAALRGASRPVIVAGGGSRGAAEELRELVDTLGAPIVTTLNA KGVVDEHHPLSLGANLRFTEVREYARTADVLLVVGSKLGEAELWVERLEATGTVVRIDLA EGQVNKNLTADIGLVGDAKATLSALLDGLDVASQAGDFRAGVAGALEAARAEGLETSRES TLIAEDIVAALPHDAIVSTDSSQICYLGLLNAIKVSTPNSTPYMATYATLGYGLPAALGA RIGAPDRPTFAVVGDGALMFSLQELITVVEQGEDLTVIVVDNGGYGEIRANEISAGIDPV GVELTQPDWPLMAAASGGHGVAVDDLGQLKDAVANAVEAGGLQLIHIDAKRYTTAG >gi|294971693|gb|ADNU01000032.1| GENE 77 76102 - 77073 970 323 aa, chain - ## HITS:1 COG:MT1501 KEGG:ns NR:ns ## COG: MT1501 COG0604 # Protein_GI_number: 15840914 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 1 321 8 333 335 285 50.0 7e-77 MYAVQAQRAGGPEVLEYVEVDDPTPGEGEVLVDVKATGINFIDTYRRSGVYPMQFPHIPG TEGAGVVSQVGEGVTSVQVGDRVAWHDAFGSYAQKVAVKADMLVPVPEDIDFDTAAAILL QGLTAHYLVTGSHRIEPGQTALVHAAAGGVGLLLTQLITHMGGTVIGTVSTEEKAQLARE AGAQHVFLYGEGVDIAQTVRDLTDGEGVHVVYDGVGKDTFDASLDSLRVRGSLVVFGGAS GQVPPFDVQRLNSAGGVFLSRPSLQWFVRTPEELRERSEDLFTGLKEGWLKFRVGATFPL EEAADAHRALEGRKTTGKVVLKA >gi|294971693|gb|ADNU01000032.1| GENE 78 77130 - 78197 775 355 aa, chain + ## HITS:1 COG:ML1406 KEGG:ns NR:ns ## COG: ML1406 COG0002 # Protein_GI_number: 15827736 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Mycobacterium leprae # 6 355 7 347 347 283 49.0 3e-76 MKTYSVAVSGATGYAGGEMLRLLSAHPCANVTTVCGHSTAGSLLGSHQPHLRDYAHMVIQ PSTAQVLAGHDVVVLALPHGASGKIAAELGKLSPDTLILDLAADHRLELAEAWEAYYKSE HQGTWTYGLPELLRAQGPTQRELLTQARRIAVPGCNVTAITLAIQPLVKAGLIDHTALTA VLANGVSGAGKALKPHLLAGEILGNASPYAVGGAHRHIPEIEQNLAHVIGEDVAQSTTRI TFTPTLVPMARGILATVSAPTHASASQISEALAKAYEAEPFVTVLPHDQWPTTSATAGAH TAHLQAAVDERAGTAVVVCALDNLVRGTAGQAIQSMNLALGLDETTGLTQQGVAP >gi|294971693|gb|ADNU01000032.1| GENE 79 78194 - 79366 1100 390 aa, chain + ## HITS:1 COG:ML1407 KEGG:ns NR:ns ## COG: ML1407 COG1364 # Protein_GI_number: 15827737 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Mycobacterium leprae # 3 390 19 407 407 329 51.0 7e-90 MTVTSPRGFRASGVTAGLKPSGQPDLALVVNDGPQHAVAAVYTSNRCKANPVLFSQKVTA GGGARAVVLNSGGANCFTGQFGYETTEMTAAEVAAGLTATGNEPVTASDIVVCSTGLIGV GDQTWRDTLLGGITPAINALSATGGEDAARAIMTTDTVPKNVEVSVGDCTIGGIAKGAGM LAPALATMLVVLTTDAQLTPEELDTALRHATARSFDRLDSDACMSTNDTVVLMSSGASGV HPDLDAFTQALTEACQDLARQLMSDAEGAAHNIAITTSGAASESDAVEVSRAVSRSNLFK TAIFGEDPNWGRIVAQVGTTSAEFDPANIDVTVNGVPVCVASGPHADPETVVFTRDVTVD INLNAGDHRATVWTNDLTHQYVEENSAYSS >gi|294971693|gb|ADNU01000032.1| GENE 80 79363 - 80256 870 297 aa, chain + ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 13 293 10 293 317 257 51.0 2e-68 MTQLSPAQRVARAQIKASTLTEALPWIKKFSGATIVIKYGGNAMISHELQQSFADDVAFL RFAGIRPVVVHGGGPQIGAMLDRLGIPSEFVDGQRVTSPEAATVTRMVLAGQVNRDIVSR INQNGDAAVGLSGEDADLLLASPVERAELGRVGNIEAVNTQVLNELLDQGRVPVVCSIAA ELGGEPGMPLNTNADLAAAAIAKHMKADKFIMLTDVPGLYANWPDTDSLISEITAQELRE LLPSLDSGMIPKMTAALEAVDAGVNQVHVVDGRTAHSVLLEVFTDEGIGTMVLGGDA >gi|294971693|gb|ADNU01000032.1| GENE 81 80253 - 81428 1122 391 aa, chain + ## HITS:1 COG:ML1409 KEGG:ns NR:ns ## COG: ML1409 COG4992 # Protein_GI_number: 15827739 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Mycobacterium leprae # 2 387 10 393 404 328 49.0 9e-90 MTWQDEHSNAILPALGKPQLKLERGNGAYVWDSEGKKYLDFLAGIAVNSLGHAHPDLVKA VSNQMLTLGHVSNYFASDPQIELAHALLKVANAPEGSSVYFSNSGSEANEAALKIARKTG RTKIVAVEGGFHGRTLGSLSVTHKPAYREPFDPLLPGVEHVPHGDIDALTNAIDDTCAAV IIEPIQGEAGVRPHPAGYLTAAREATSAAGALLILDEVQTGIARTGYWYAFQNPDIGEGI VPDVVTSAKGIGGGIPLAATLTFGADVTKLLAPGEHGSTYSGNPVATAAGLAVLNVIERD GLLEHVRQTGEHLRNSLENLDGITGVRGSGLLLSFEPAGGAKAFAASALTHGIIVNPATP ERVRIAPPLIVTSSQIDEFIHSIPQILQDIA >gi|294971693|gb|ADNU01000032.1| GENE 82 81425 - 82393 879 322 aa, chain + ## HITS:1 COG:MT1694 KEGG:ns NR:ns ## COG: MT1694 COG0078 # Protein_GI_number: 15841112 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 312 1 307 307 338 57.0 7e-93 MTRHFLKDTDLSPAELNEVLDLAAELKANPYSLKPYAGPQTVAVIFDKTSTRTRVSFAAG VAALGGQPLIINPGESQIGHKETIEDTARVMSSMTSTIVWRTFAHEGLQKMAQNSTVPVI NALCDDYHPCQLLADLLTIREHRSTGEGNGLAGLTLSYFGDGANNMAHSYVLACVNAGMH VRIAAPEGYRPAPHVLSEARELATQTGGSVTVTTDAREAASGANILVTDTWVSMGQDAHG RNDAQSPFTPYTVTQELMDLGDNPIFMHCLPAYRGFEVTAEVIDGPQSVVFDEAENRLHA QKALMAWLMAQSQGSGAQGSGA >gi|294971693|gb|ADNU01000032.1| GENE 83 82342 - 82950 426 202 aa, chain + ## HITS:1 COG:MT1695 KEGG:ns NR:ns ## COG: MT1695 COG1438 # Protein_GI_number: 15841113 # Func_class: K Transcription # Function: Arginine repressor # Organism: Mycobacterium tuberculosis CDC1551 # 35 190 14 166 201 129 50.0 4e-30 MAHGSVAGEWRTGEWRVSKNGASDTNETSSVANAIPGTKAARHALLIDIIRRNHVRSQTE LIELLAGTGIAVTQATLSRDLVELGAIKVRTAEGSAYAVPGEGGDRSLEQGVKGHVLHAK LQRHLEELLVSATWSANLAVLRTPPGAAQFLASTIDHSVIPEIIGTIAGDDTVLIISADP QGGKDIANQFICLAGAEDKEYT >gi|294971693|gb|ADNU01000032.1| GENE 84 82947 - 84155 1337 402 aa, chain + ## HITS:1 COG:MT1696 KEGG:ns NR:ns ## COG: MT1696 COG0137 # Protein_GI_number: 15841114 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 397 1 398 398 559 67.0 1e-159 MTERIVLAYSGGLDTSVAIGWIQEATGAEVVAMAVDVGQGGEALDTIRQRALDCGAVEAY VADARDEFANEYCMPGLKANTLYMGAYPNVSALSRPVIAKHLVAAAKQFGASTVSHGCTG KGNDQVRFEVAITSLAPELKTIAPVRDLALTREAAIEYAERNELPIVTTKNNPFSIDQNV WGRAVETGFLEDIWNGPTKDVYDYTNDPAFPPPADELIITFEKGIPVAIDGNAVTPLEAI MQLNERAGRQGIGRIDIVEDRLVGIKSREVYEAPGAMTLIAAHQELENITLEREQARFKR TVDQRWTELVYDGQWFSELKGSLDAFIDDTQEHVSGDIRMILHGGRATVTGRRSENTLYD FNLATYDEGQSFDQSAARGFIDIYGLSSKQATARNQRLGYSH >gi|294971693|gb|ADNU01000032.1| GENE 85 84164 - 85597 1367 477 aa, chain + ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 5 461 10 472 477 528 62.0 1e-150 MTGISLWGGRFADGPDDALAKLSKSTDFDWRLASYDLAGSRAHARVLHAAGLLDEDELRG MLSALDELEARVNSGEFVPDEGDEDVHSALENGLLQIAGQQLGGKLRAGRSRNDQIATMG RMYLRDSARIIASLVLDTVEALIEQAHAHIDAPMPGRTHLQHAQPVLLAHQLLAHAWPLM RDVDRLIDFDKRADVSAYGSGALAGSSLGLNPQAVATELGFSDSVENSIDGTASRDIFAE FAFCAAMIGVDLSRLSEEIIVWATAEFGFVKLDDRFSTGSSIMPQKKNPDVAELARGKAG RLIGDLTGLLATLKAQPLAYNRDLQEDKEPVFDQVDTLTLLLPAFTGMVATLKFDTERMA HLAPRGFALATDVAEWLVRQGVPFRVAHELSGAAVKLAESRGVELWDLSDEDYAGISEHY TSDVRSVLTTLGSINSRNAKGGTAQSAVEQQLSNARAELARLREFGATTSGGAAGLH >gi|294971693|gb|ADNU01000032.1| GENE 86 85642 - 86934 704 430 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 2 391 8 383 418 275 38 4e-73 MDIFSDLVKRELVAQTTDEDALHKALSEESLKFYVGFDPTAPSLHMGNLVQILVARRLQA AGHTPYMLVGGATGLIGDPRMTSERSLNPRDVVEGWVEKIRAQIQPFLDFEGPNAATMVN NYDWTGDISVLDFLRDVGKHFSVNRMLAKEAVSARLNSDAGISFTEFAYQLLQGNDYLEL YRRYGITLQTGGSDQWGNLTSGADLIRRVERTSVHAMSIKLITKADGTKFGKTETGTVWL DPTLTSPYAFSQFWLNTADADAPGYLKVFSLRELDEINDIIEQFKEAPHTRLVQKTLARD VTELVHGKEATDQAFAAADALFGRGELTELDEPTIAGATSALPGTDIDSAALAAGVNVVD LFVDAFAQTGQLKSKGEVRKAIQQGGAYINNVKVESEDHVMTADQFLPAGDHAVALLRRG KKTLAVACLR >gi|294971693|gb|ADNU01000032.1| GENE 87 86922 - 87989 756 355 aa, chain + ## HITS:1 COG:PAE1905 KEGG:ns NR:ns ## COG: PAE1905 COG1266 # Protein_GI_number: 18312958 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Pyrobaculum aerophilum # 189 335 14 159 159 88 41.0 2e-17 MPAVTTLNDRSPALPVNGKAIGLYVVLALGLAWLVTLPIWLMGSDLSPSLPAVKEMGEPG SGPMPTEGELFTQSLIAQVCGVVMLFTPGIAAVITLMVSGVKFSRVFPMLGAGRPVRVPG FRPRAAGNWPYVRRLLLGLVATLAVTLLIALVITIATPVWPANGHTLAHQSASALGMPLA LFLIMQFAMIPVGAIFNALPSAGEELGWRGYLYPALTQRLGFAWAVVVGGAIWGLWHAPL IMAGYNFGLFGLPGVALMTASCIGLGAWFAYLYGATGSIWVPALVHGLFNAAAGITLLFW PADTAFNGVTASVLGVWSLVVLVPLAAVLVWRVAKEPERAEKDLENGLQTPGDSV Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:26:07 2011 Seq name: gi|294971689|gb|ADNU01000033.1| Brevibacterium mcbrellneri ATCC 49030 contig00036, whole genome shotgun sequence Length of sequence - 893 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 410 - 634 290 ## + Term 717 - 754 8.7 - Term 702 - 745 11.7 2 2 Tu 1 . - CDS 760 - 891 167 ## PROTEIN SUPPORTED gi|119963995|ref|YP_948639.1| ribosomal protein L15 Predicted protein(s) >gi|294971689|gb|ADNU01000033.1| GENE 1 410 - 634 290 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTESVRKLANGARALTSAFAAMSIAIIVTCVAFGVATLPVPSILVWMAFIGLLAFSCTY IATYITFSLSKPKA >gi|294971689|gb|ADNU01000033.1| GENE 2 760 - 891 167 43 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119963995|ref|YP_948639.1| ribosomal protein L15 [Arthrobacter aurescens TC1] # 1 43 118 160 160 68 76 1e-12 RAKQPVKVLGTGEITVKLDITAHKFSKSAADKIAAAGGSATSL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:26:13 2011 Seq name: gi|294971687|gb|ADNU01000034.1| Brevibacterium mcbrellneri ATCC 49030 contig00037, whole genome shotgun sequence Length of sequence - 591 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 591 169 ## Asphe3_25260 integrase family protein Predicted protein(s) >gi|294971687|gb|ADNU01000034.1| GENE 1 3 - 591 169 196 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_25260 NR:ns ## KEGG: Asphe3_25260 # Name: not_defined # Def: integrase family protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 24 191 218 385 405 176 54.0 4e-43 GRNPDRQRTGLHHPPCRRTHQQPNPFEQLLADLNIEQKNGHPGKPTTQGKIERLHSTLKK WLQAQPPALTIEDLQQQLHDFRTIYNTKRKHRAINRQTPHQTYTATPKDQPTMHLHNTHW RVRFDRVDSYGKITLRYAGKLKHLGIGRTHNRQRIILLVNGPNAIAINKTTGEIIAEYTI DPTKNYQPKTTTPHTK Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:26:17 2011 Seq name: gi|294971686|gb|ADNU01000035.1| Brevibacterium mcbrellneri ATCC 49030 contig00038, whole genome shotgun sequence Length of sequence - 1150 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 88 - 1140 693 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|294971686|gb|ADNU01000035.1| GENE 1 88 - 1140 693 350 aa, chain + ## HITS:1 COG:AGc3822 KEGG:ns NR:ns ## COG: AGc3822 COG2801 # Protein_GI_number: 15889390 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 29 345 189 505 512 263 45.0 5e-70 MSKKERTQRARTPTRASFEKSLPDDPAELKKQMARLLVEKAVLEEELELIKKDDSVIPGQ LSNSSKTCVVDALRTQYPLALLLAVIGLASSSFYYHVQQHRMPDKHAHVRKLLHQISDQS HNTYGYRRIWWELRHRGIIMSEKVVRRLMREEGIIPRFPKRKWKYSSYQGEISPAPPNLV NRKFHADRPNRLWLTDISVFTANEGRVYLSAIIDCFDGKVVAAKTSTHPTMELAEETLHA AITAERPTADGSLIIHSDRGAHYRGKTWQQLTSAYQIVRSMSKKGCTPDNAACEGFFGRM KNEMYYGKKWRTTQELENAIATYIEFYNNHRIKTSLNGLSIAKHRALHIA Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:26:35 2011 Seq name: gi|294971635|gb|ADNU01000036.1| Brevibacterium mcbrellneri ATCC 49030 contig00039, whole genome shotgun sequence Length of sequence - 54754 bp Number of predicted genes - 53, with homology - 52 Number of transcription units - 30, operones - 15 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 94 - 1503 1727 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 1552 - 1597 15.7 - Term 1538 - 1585 16.1 2 2 Tu 1 . - CDS 1607 - 2374 875 ## COG4922 Uncharacterized protein conserved in bacteria - Prom 2541 - 2600 2.0 3 3 Tu 1 . + CDS 2557 - 4047 1510 ## COG0579 Predicted dehydrogenase + Term 4072 - 4120 18.5 4 4 Op 1 . + CDS 4210 - 5880 1424 ## COG2339 Predicted membrane protein 5 4 Op 2 . + CDS 5883 - 7082 605 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 7113 - 7153 2.5 6 5 Tu 1 . - CDS 7129 - 8034 646 ## SAV_5946 hypothetical protein - Prom 8062 - 8121 1.7 7 6 Tu 1 . - CDS 8143 - 8838 724 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 8985 - 9044 2.4 8 7 Tu 1 . - CDS 9079 - 9714 704 ## COG0035 Uracil phosphoribosyltransferase 9 8 Op 1 . + CDS 9800 - 10339 724 ## Acel_2019 hypothetical protein 10 8 Op 2 . + CDS 10386 - 10814 292 ## COG0590 Cytosine/adenosine deaminases + Term 10827 - 10876 1.3 11 9 Op 1 . - CDS 10896 - 11843 694 ## Gobs_1530 hypothetical protein 12 9 Op 2 . - CDS 11840 - 13453 1104 ## COG1129 ABC-type sugar transport system, ATPase component + TRNA 13809 - 13896 48.0 # Ser CGA 0 0 13 10 Tu 1 . + CDS 14230 - 14385 66 ## gi|295395476|ref|ZP_06805671.1| conserved hypothetical protein 14 11 Tu 1 . - CDS 14584 - 15540 547 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 15447 - 15506 5.5 15 12 Tu 1 . + CDS 15533 - 16099 349 ## COG1309 Transcriptional regulator + Term 16127 - 16185 17.5 - Term 16123 - 16166 12.3 16 13 Op 1 . - CDS 16182 - 17723 1671 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 17 13 Op 2 . - CDS 17852 - 18859 793 ## COG2267 Lysophospholipase 18 14 Op 1 . + CDS 18937 - 20040 833 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 19 14 Op 2 . + CDS 20037 - 21473 1227 ## COG0277 FAD/FMN-containing dehydrogenases + Term 21493 - 21530 -0.1 20 15 Op 1 . - CDS 21512 - 22324 679 ## CMS_0457 putative lipolytic enzyme 21 15 Op 2 . - CDS 22326 - 24473 1918 ## COG0339 Zn-dependent oligopeptidases 22 16 Tu 1 . + CDS 24559 - 25761 1230 ## COG0477 Permeases of the major facilitator superfamily - Term 25705 - 25749 2.0 23 17 Op 1 . - CDS 25767 - 26138 319 ## AAur_1180 putative amino acid permease 24 17 Op 2 . - CDS 26087 - 27013 728 ## COG0531 Amino acid transporters 25 17 Op 3 . - CDS 27086 - 28519 1324 ## COG1376 Uncharacterized protein conserved in bacteria + TRNA 28763 - 28847 57.8 # Ser GGA 0 0 + Prom 28765 - 28824 80.3 26 18 Op 1 . + CDS 28940 - 29152 187 ## gi|295396744|ref|ZP_06806884.1| hypothetical protein HMPREF0183_2382 + Prom 29212 - 29271 2.2 27 18 Op 2 . + CDS 29318 - 31096 1979 ## COG1292 Choline-glycine betaine transporter + Term 31115 - 31162 13.1 + Prom 31129 - 31188 2.3 28 19 Op 1 . + CDS 31215 - 31955 752 ## COG2610 H+/gluconate symporter and related permeases 29 19 Op 2 . + CDS 32040 - 32657 654 ## COG2610 H+/gluconate symporter and related permeases 30 19 Op 3 . + CDS 32703 - 33467 677 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 33575 - 33635 5.3 31 20 Tu 1 . - CDS 33648 - 35357 1775 ## COG0306 Phosphate/sulphate permeases 32 21 Op 1 . + CDS 35500 - 36321 659 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 33 21 Op 2 . + CDS 36324 - 36653 398 ## gi|295395495|ref|ZP_06805690.1| hypothetical protein HMPREF0183_1188 34 22 Tu 1 . - CDS 36692 - 37147 451 ## COG0655 Multimeric flavodoxin WrbA 35 23 Op 1 . + CDS 37200 - 38054 422 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 36 23 Op 2 . + CDS 38072 - 38680 523 ## KRH_18520 hypothetical protein 37 24 Tu 1 . - CDS 38728 - 38970 258 ## gi|295395499|ref|ZP_06805694.1| conserved hypothetical protein - Prom 39024 - 39083 2.0 38 25 Op 1 1/0.200 + CDS 39110 - 41794 1767 ## COG2812 DNA polymerase III, gamma/tau subunits 39 25 Op 2 . + CDS 41791 - 42405 447 ## COG0353 Recombinational DNA repair protein (RecF pathway) 40 26 Op 1 13/0.000 + CDS 42531 - 43826 1248 ## COG0527 Aspartokinases 41 26 Op 2 . + CDS 43823 - 44857 996 ## COG0136 Aspartate-semialdehyde dehydrogenase + Prom 44869 - 44928 2.8 42 27 Op 1 25/0.000 + CDS 44954 - 45994 961 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 43 27 Op 2 42/0.000 + CDS 45981 - 46811 752 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 44 27 Op 3 . + CDS 46820 - 47704 956 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 45 27 Op 4 2/0.100 + CDS 47756 - 48652 606 ## COG1408 Predicted phosphohydrolases 46 27 Op 5 . + CDS 48710 - 50986 1895 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 47 27 Op 6 . + CDS 51044 - 51205 283 ## Intca_0475 hypothetical protein 48 27 Op 7 . + CDS 51208 - 51663 522 ## COG0251 Putative translation initiation inhibitor, yjgF family 49 27 Op 8 . + CDS 51755 - 52675 682 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 52768 - 52801 0.3 50 28 Tu 1 1/0.200 - CDS 52682 - 53488 617 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 53518 - 53577 1.7 - Term 53594 - 53639 15.0 51 29 Tu 1 . - CDS 53664 - 54341 593 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 54410 - 54469 4.9 52 30 Op 1 . + CDS 54353 - 54493 64 ## 53 30 Op 2 . + CDS 54503 - 54752 170 ## COG0177 Predicted EndoIII-related endonuclease Predicted protein(s) >gi|294971635|gb|ADNU01000036.1| GENE 1 94 - 1503 1727 469 aa, chain + ## HITS:1 COG:DRA0343 KEGG:ns NR:ns ## COG: DRA0343 COG1012 # Protein_GI_number: 15808002 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Deinococcus radiodurans # 18 461 19 462 477 402 47.0 1e-112 MRVNLQGDVMTNGYRVENPETSDVVETFDNATDAQIEEALALANDAYKEWSARPMSERAD IVAKVAALFDERKDELADIIGQEMGKRHSEGAEEAEFCSAIFGYFATNGEKLTGDLDLEV DGAHAVLERRPIGTILGIMPWNFPYYQVARFAGPNLVLGNTILLKHAEICPKSAAAIQQI MDDAGVPKGVYQTLYATHDQISTVIADNRVAGVSLTGSERAGAIIAEQAGKALKKAVLEL GGSDPYIILDADNVKEAAANAWATRMYNTGQACDSNKRMIVMDDIYDEFVAELEALASKM TPGSYTSDDETVFQPLSSRSAAERLAGQLEDVKKAGGNIRVGGELSDKGAYISPAVVTDI PRGSDVYYEEFFGPIAVVYKVSSDEEALELANDSQFGLGGSVFSQDKERAEKVGSQLEVG MAKINTHAAEGESIPFGGVKRSGYGRELGPVGMDEFVNKRLYWVGEEGA >gi|294971635|gb|ADNU01000036.1| GENE 2 1607 - 2374 875 255 aa, chain - ## HITS:1 COG:SP1862 KEGG:ns NR:ns ## COG: SP1862 COG4922 # Protein_GI_number: 15901690 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 63 255 67 254 254 62 27.0 6e-10 MADHGQFVLDTHTRLFHQHDTSVLDTDFTDDFVEHSPLVAGDRAGLKKLVEDAGEGLKYE NSRVISDGDLVALHGKFTGLDDDVLVGFDIYRVKDGKITEHWDSLVPEAAPNESGRTQLD GPTDPDTSADTEANRALVVEFFEKTLVGGDYSGFETYSKDGRFDQHSPDIADGIPAVIDF LEKLREAGEGLEYDKIHRTVAQGDFVLTHSEGSIAGTRHAYCELWRVEDGAIVELWDAIS EVPADDQAVHNHGVF >gi|294971635|gb|ADNU01000036.1| GENE 3 2557 - 4047 1510 496 aa, chain + ## HITS:1 COG:PA4640 KEGG:ns NR:ns ## COG: PA4640 COG0579 # Protein_GI_number: 15599836 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Pseudomonas aeruginosa # 6 495 7 499 507 540 53.0 1e-153 MSYTKENVDVVLIGGGIMSATLGTMLAELQPEWSIRVYERLDYVARESSDPWNNAGTGHA ALCELNYTPQLANGDIDITKAVNINEQFHVSRQFWSYLVDEGVLTNPSSFINAVPHVSYG RGEKGRDYIRARRETLVKNPLFRDMEFTDDPAEQAEWLPLMFENRGPGQVNGLSRIKEGT DVDFGSLTRQLLAHMGTRGAQIRTGHSVSDLNRTADGWKVSVHDHTGAESFDVNAKFVFI GAGGGALPLLQKSGIAEARGYGGFPVSGLFLRTANPDLVERHHAKVYGQASVGAPPMSVP HLDARVVGGKKYLMFGPYAGFSPKFLKGGSIFDLPFSVRGNNLPVMLNVAKDNFDLVKYL VTQLAETKKGRFEALADFTPDINRDDWEMLVAGQRVQVMKRDPKKGGVLGFGTETVAAAD GSLAALLGASPGASTATPIMVELLKRCFPQQYTGWEPKLKQMIPSLGRKLHQDETLLNEV SEYSARTLQTQAPDND >gi|294971635|gb|ADNU01000036.1| GENE 4 4210 - 5880 1424 556 aa, chain + ## HITS:1 COG:Cgl0156 KEGG:ns NR:ns ## COG: Cgl0156 COG2339 # Protein_GI_number: 19551406 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 251 466 80 280 321 63 28.0 2e-09 MSNQYDPYGQGNQGHGNNQFGSQPGAQPYGSQPGGQQFGNQQYGSQPFGGQQPGSQPFGG QQPGSQQYGSQPGAQPYGNQPGGQQYGSQPADHQRFSPGAQQQQPANFNQYGGYQYGFQD HTSDQVHQRTYDEGRFAPSHTQALRIQNRVETHQGAPAQAPWTTQAISVTPSVAQKPSDT GDIVRLVIALALGGLLLLGFAILFLFMTLSSGLVTFVAMFLSFFPLLLIIGMVLWFDRWK PQPKVAMGLCILWGGVAAVILTLIFRFPLEYLMAGAGVTDESGAISAVVMAPIFEEITKG MILVVIALAARRYFEGPLDGWVYGSLAGAGFAFTENILYLSSAYMSGAQYGVGAASLIMT FIVRCLLSPLLHSTFTMCAGVTIGLAARRGQWWSIILMWIPGLLAGMFLHALWNGLATFL RPSSFLAAIVVIIVPSLLISSIWFGLAIFLQFNETKQTRANLGDYANAGWLTHAEVEMLG TWKGRRAGKRWAGRYPSGKQHMKKMIKTSTALATTRMRIVGGVGGAGEQERERYLLDQFT QERSALMHAAGQPGGF >gi|294971635|gb|ADNU01000036.1| GENE 5 5883 - 7082 605 399 aa, chain + ## HITS:1 COG:ML2298 KEGG:ns NR:ns ## COG: ML2298 COG0265 # Protein_GI_number: 15828230 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Mycobacterium leprae # 5 393 11 399 401 175 35.0 1e-43 MPAPDLILAFVGITTAFAGWRRGLIVSLSSFVGFVVGFALGRVLAGPVVGWVNGSANAEV VPAWVVPLAPLIVGFVVAGFGGWLGMWLRRVLHKTPGKWVDAGLGAFVGVVSFLLCVWLA ATWIRTTPFVQLNRAVAESRIVAVTDWIMPADPNVVVGTLDRALVNYGFPTVFKGQPERI RGIGEPNPEMVEVGKSVSGSVVKVRTDETVCDNLQSGTGWVFAPEHVATNAHVVAGSTSL TVQVKGKGKVFDAQLVAFDPKRDVAVLRVPGLAATPLDTGADLKAGADAVAVGFPGNGGY TISPARTRETLRARGTDIYDDESVTRNVYSLRAIIRQGNSGGPLLDKNGRAVGMVFATSL NDKETGYALTIGEIESVLRQGRNAERPLPSGKCPMLTGK >gi|294971635|gb|ADNU01000036.1| GENE 6 7129 - 8034 646 301 aa, chain - ## HITS:1 COG:no KEGG:SAV_5946 NR:ns ## KEGG: SAV_5946 # Name: not_defined # Def: hypothetical protein # Organism: S.avermitilis # Pathway: not_defined # 2 300 38 341 345 211 38.0 4e-53 MRKGTFVFLMGAGLTALLLLHHLIPTTRGLALMVESVLPWTGVLVVFLLVLGLIRFSVWS VIGVVIPALVWGSMFGMYLKPAGEPDHTDIVVATQNVGARLPQPSATALNIIKRKPDIVT LQEIESLSGKIIREQMDKNFKHHKVSDTVGLWSKWPISDIEEIDLGLSWPRAFAATVKTD HGDVRVYSVHMPSVRPGSESLRNAALQTVAQKVSEDPAQRVIVAGDFNSTSTDRYFADLN DSLTDTRRATGGGFGFTWPAKFPVARVDHIMVRGMEPVSDTVLPRGTSDHRAIVAGINVN D >gi|294971635|gb|ADNU01000036.1| GENE 7 8143 - 8838 724 231 aa, chain - ## HITS:1 COG:BS_yclJ KEGG:ns NR:ns ## COG: BS_yclJ COG0745 # Protein_GI_number: 16077443 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 138 218 143 226 227 86 53.0 5e-17 MRRQGSRLAPVDAEQAPRTFGPAGVTQTPHAARGIAIYIGLDEEKAAQDGTNLTQIAQAL QDYAKELASQAETSAVIALAPEGRGRDLEAVRAALSGSPAATGGTAGQHGPLRTRIPSRI QPPAMREDLGLRVDIPRREIYVDGAPQKITAKEFDLLATLVSHPGESLSREQLIEKVWAG QDTDERTVDVHIRRLRNRLGSYSSVIRTLRGVGYRFDEHPDVSVWLATAVK >gi|294971635|gb|ADNU01000036.1| GENE 8 9079 - 9714 704 211 aa, chain - ## HITS:1 COG:SPy0392 KEGG:ns NR:ns ## COG: SPy0392 COG0035 # Protein_GI_number: 15674535 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 4 209 5 207 209 211 49.0 8e-55 MELHVADHPLIAHKLTVLRDERTDSARFRQLTDELVTLLAYEATRNIRVTDKHIRTPVKE TVGVELATPRPLVVPILRAGLGMLDGMMRMIPTAEVGFLGMVRNDETLEVTTYAERLPSD LKNRQVYVVDPMLATGNTLIMAIEYLLERGVSEVTAVCLVSAPEGVKAVSDRFEGRANIS VHTAAYDEGLNDDAYIVPGLGDAGDRLYGVV >gi|294971635|gb|ADNU01000036.1| GENE 9 9800 - 10339 724 179 aa, chain + ## HITS:1 COG:no KEGG:Acel_2019 NR:ns ## KEGG: Acel_2019 # Name: not_defined # Def: hypothetical protein # Organism: A.cellulolyticus # Pathway: not_defined # 1 179 22 184 184 71 31.0 1e-11 MSYFTAAVAQAGDEYRPVDIDVEEWSDLDELADALRSVAGEDCEAVAIVEREDEWFALVR LTEADNIKVFISDIDAAQASPYADLFEDYLDSPLDEYELEDGDDFDDDYEEPSDDDESES AMFPDEDSTWGGDSDIFDDLGVSASDLLDQCEKHSADPARIVAHVGEIVGFAEALEATR >gi|294971635|gb|ADNU01000036.1| GENE 10 10386 - 10814 292 142 aa, chain + ## HITS:1 COG:Cgl0229 KEGG:ns NR:ns ## COG: Cgl0229 COG0590 # Protein_GI_number: 19551479 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Corynebacterium glutamicum # 1 142 17 159 159 128 53.0 4e-30 MQLALGEARACATSGDVPVGAVVVVDGEVVGRGRNRREADGDPTAHAEVVALRAAASRLG RWRLDGATLVVTLEPCAMCAGAAVGARVDAIVFGAFDEKAGACGSQWDLPRDRGSLHRPQ VYAGVMSVEAVHVLEEFFAARR >gi|294971635|gb|ADNU01000036.1| GENE 11 10896 - 11843 694 315 aa, chain - ## HITS:1 COG:no KEGG:Gobs_1530 NR:ns ## KEGG: Gobs_1530 # Name: not_defined # Def: hypothetical protein # Organism: G.obscurus # Pathway: not_defined # 201 315 8 122 122 154 66.0 7e-36 MSFNFFRRSPKPRDKSQTDEPHVTDTSHTMQTLPDTETPGQIAQSSVRHYGAVQPHVAGS NDPVTKWHEKATGHERVVHNQQDTNYDADSYNVDPADAPDHHAGAEAKHVANQSRDYFPT AFESFGQRPLATETNTVNDHSNEPTPLFTEVRDYTSNVRTEESISQHPGKTEQNNDSFSE ARKPRSETKESNMSTNIQAFIHDLMEIEGATGAAIVDIASGMELGSGGNPNFDLNVAAAG NSNVIRAKLSTISDLGINESIEDIMITLESQYHLLSVLNSSTTEGLFIYLVLDRRHANLA LARHKLKKLAEQISV >gi|294971635|gb|ADNU01000036.1| GENE 12 11840 - 13453 1104 537 aa, chain - ## HITS:1 COG:AGc5112 KEGG:ns NR:ns ## COG: AGc5112 COG1129 # Protein_GI_number: 15890066 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 18 501 24 516 521 233 31.0 1e-60 MVEALFLYYGGGLMTSDVVLTVDGLTVKHRSQTALDDLSFTLKRGEVLGIVGANGAGKST LLKVLSGGITPNAGTITFADEKFTPANEAEALAIGVGYIPQRITVDEDQTVYQTMFRTSY RSKLSDDEKRSEANRLLKDNGVSISADEYIRDLVQAERTMVEILRLANEETSLILLDEVS ATFNDHEISLVHDLIIRLSKQGRAIIYVSHRLDELQSLSNRIAVIRDGKLRSILTPLEAD RKTITVEIFDTEAPVPTKKRNEIGDEILRFDNVALEGKLSPTTFSLRKGEILGITGLRRS GVEQLAEVISGQATHTSGTITVNGEEETFSSPDEALQSGILTLGENDGQVDYGEGNLLAS EYSKVNEDGESFAVQVESFRELLATLKELRVKTPGIQRKIGELSGGDQQKLAVAKTLHSD ANIFVLNQPTRGVDELSRQAAYKLLEEVTSRGSACILLSSDISELLTLSDRVAVMRDNKL IGPLDTDGFTEDTVMMIALGYTPFRTSSKRRSSSNTESSTEPTTKLPTDKGVRGESG >gi|294971635|gb|ADNU01000036.1| GENE 13 14230 - 14385 66 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395476|ref|ZP_06805671.1| ## NR: gi|295395476|ref|ZP_06805671.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 51 1 51 51 97 100.0 4e-19 MLVKHKKGGWLPQVCEIAATVVGLDLRDEDAPLVELPDRPARLRSTCWRTT >gi|294971635|gb|ADNU01000036.1| GENE 14 14584 - 15540 547 318 aa, chain - ## HITS:1 COG:mll4580 KEGG:ns NR:ns ## COG: mll4580 COG0697 # Protein_GI_number: 13473848 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Mesorhizobium loti # 24 310 10 294 308 120 34.0 5e-27 MCMVYPQVNCGALTVYRPVCLPKRMRWLMCVVFVVAWSSGFVGATLADRTGAGTWTLLAW RYLVTALVLLVGCLLIPSLRRSFHTLSRRQVQQQVVLAVLSHVLFLGGVFLSAEQGLDAG LSALVCALQPLLVTAAGRIIFGDRVSSFQWVGLLMALGGVALSVGGISTTGLGSVSLVVV SLLGLSAASLLERSWQPRVPVVTSLTVQVSVVAVIFSGVALLTDGLALRVTGALVLAISW LVFMSGLGGYAMFIWCLRHVGATTTSTLLYLTAPTTMLWAWSMFGQQPLTLQWIGLAVVL SGVGLATRGSNQREQGTA >gi|294971635|gb|ADNU01000036.1| GENE 15 15533 - 16099 349 188 aa, chain + ## HITS:1 COG:mlr4117 KEGG:ns NR:ns ## COG: mlr4117 COG1309 # Protein_GI_number: 13473500 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 17 133 23 142 205 67 37.0 1e-11 MHIDLAAFEPVDTTPVGRRILEAASELFRDHGITATGVDSIVERAATTKRTLYQRYGSKG RLVACYLQQRAHFWQRELLTALTGASPVQALEVVYRHTVQWATATPRGCAFVNAWVEIGA NDHEATELIRAEKAWMLTLFTQIAGGDGNTGTILHLLYEGAQVTTSIQGDPRELAQACAA SQELLNRQ >gi|294971635|gb|ADNU01000036.1| GENE 16 16182 - 17723 1671 513 aa, chain - ## HITS:1 COG:PA2555 KEGG:ns NR:ns ## COG: PA2555 COG0365 # Protein_GI_number: 15597751 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Pseudomonas aeruginosa # 20 512 29 540 555 379 42.0 1e-105 MKLDQLVQEWLETYDTPDANASYLLCDRHDPQATAFTFIAHDGTVSKPTYGELSDRSKRL ATALKQQGVEKGDRVGVLLTKCPDMPVTLLALTRLGAVYVPLFTAFATGAIKVRMEGAKA KLVITEPSQEDKVKPLNWLNVITIGEDYDRMQTEPEPLEDSVAMGGDGTLVQLFTSGTTG NPKGVAVPVRALASFHCYMHYSLDVRPEDVFWNAADPGWAYGLYYGVLGPLAIGLPNLMQ QDKFTADSTLQLMREQGVTNYASAPTVYRTLSKSGLEPGFTLRRASSAGEPLTVDVIDWA KEKLGTEVYDQYGQTELGMVICNQWNDDVREELKPGSMGKPIAGYEADILDGQIVISVPN SPLLWFTGYQDDPQKSAERFSEDGKWYLTADAGYKDEDGSFFFEGRDDDVILMAGYRIGP FDVESVLITHPDVVDVGVVGKPDRNGVRGELAEAYVVLREGVEATPELAEELKLLVKEGY SAHAYPRKVHFVDALPKTPSGKLRRGELRKRED >gi|294971635|gb|ADNU01000036.1| GENE 17 17852 - 18859 793 335 aa, chain - ## HITS:1 COG:Rv2854 KEGG:ns NR:ns ## COG: Rv2854 COG2267 # Protein_GI_number: 15609991 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis H37Rv # 11 334 4 331 346 140 32.0 2e-33 MNPTPPTQSQWLPDILGPGFESLPLELPCGDRATLVRYLPRVDNHPSRGVPHLDGVPPVE LANTAVLYIHGWSDYFYHRDLARFWAHMGAHFYAVDLRNYGRNLDLSDPERTPGLIDDLG AYDEEISACLDVLTGLHPHCRVVLSAHSTGGLTAALWANDNPGRVAGLVLNSPWLEFQYT ASVRKLLGPLMAARNPVSPLRISLPNYYVLAVAQAHGDTPFDLRLKPPESFPVYPQFLRA VFDGHKRVERGLDLDVPVLVQMSRTSMQSVNYAPQMAHADIVLDVEILARRALDLADTVV VDRVPGAMHDVYLSEESVRDQAFTRIMQFVHGYLD >gi|294971635|gb|ADNU01000036.1| GENE 18 18937 - 20040 833 367 aa, chain + ## HITS:1 COG:MT3881 KEGG:ns NR:ns ## COG: MT3881 COG0079 # Protein_GI_number: 15843395 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 342 1 340 353 226 41.0 4e-59 MEFRVRSAVADTPAYVPGKPAAPVAGQKAYKLSSNEHFMSPLPAVVEAAAKSLETMNLYG DPGVFDLTEEMAQHLSVETNQLVFGAGASEILAALFHITAEPGTEVVFPWPSFEMYVPLT LLEGATPVKVPLREDLGHDLDAMAEAINDRTRLVILCSPNNPTGGPVGREEFEEFMAKVP HDVLVVLDQAYFEYMVEGGFDGVDALPSHPNLVVVRTFSKAHGMAGLRVGWAVAHPDVIS AMRTAIMPFSVSRVAQAAASASLRLASDVDVRAKEIARIRDDMQARLREIGVPVADSQGG FLWLPLEDKAEEFERACRDVGVAVRQLTGGVRVSIGEEEAMDRVAHVASELVARGHASGA TTSGQES >gi|294971635|gb|ADNU01000036.1| GENE 19 20037 - 21473 1227 478 aa, chain + ## HITS:1 COG:MT1296 KEGG:ns NR:ns ## COG: MT1296 COG0277 # Protein_GI_number: 15840703 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 15 474 6 455 455 297 42.0 3e-80 MSNPGLPDSTGLPDLNELATQLSPNALVTDTDVIAAHSSDRALFSPVESALALVRATCVE DVQATVRFAAKHAIPIIPSGARTGLSGGINALDGCILLNVAKMNRILEVNTLDGTVTVEP GVINLDLKNHLADFNLSYPPDPGSVAISTIGGNAATNAGGMCCVKYGVTRDFVRSLKVVT ADGEVTTVGRNTAKGVAGFDLAQLFIGSEGTLGVIVEVTLRTVPKLADPLTSVALFSDPV HAARTVTDYLGKGATPSLLEYMDGGTIEAVNAYQNFGLPSGAGAMLIVQSDGSGSMTRAQ EDLELFQQVAQDNGATDVMYSDDPRDSESLVAARRAVAPANEKLAHSRGGGELVDDVCVP RGRLAEFFERQAQIAQKFPDILVIACGHAGDGNMHPNVIFDAGDPVSIQHAKEAFGMIMQ AGLDLGGTITGEHGVGVLKAEWLARELSPSAQKMHVAIKQALDPQGIFSPGKMLSHLK >gi|294971635|gb|ADNU01000036.1| GENE 20 21512 - 22324 679 270 aa, chain - ## HITS:1 COG:no KEGG:CMS_0457 NR:ns ## KEGG: CMS_0457 # Name: not_defined # Def: putative lipolytic enzyme # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 50 261 13 210 214 122 41.0 1e-26 MGAGKTALKAGLKAGLKAATAVGGVTLGMGAGYGIAVVRVRIQSALFPKFWAESARTQLE LDESLQELPPLTVNVLGDSAASGVGASKPERAYVGLLKQRLEEETGRKVSVTNISVPGAS SWLLMEKQLPLLDDLPPADITMCVIGANDLIDPKYTLEGFEWTATRLYKRLPAGTVVSTI PSFGLPWLEPKVRAANTIIEREARLNNLELADLFSTTHELGLWRYLLYTGGDIFHPSERG YVAWASALWPAVRRAAKRALEKEAHEAEQA >gi|294971635|gb|ADNU01000036.1| GENE 21 22326 - 24473 1918 715 aa, chain - ## HITS:1 COG:XF1944 KEGG:ns NR:ns ## COG: XF1944 COG0339 # Protein_GI_number: 15838538 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Xylella fastidiosa 9a5c # 34 692 45 715 716 426 38.0 1e-119 MQEKVLGSEDLHPGHVPEAESPNYLWDFVSQPEPLTLPDFSHITPELIMDALARAVAFQE QSISAILDNPEPADFNNTTLAIDAACSLVFRLQPFIRLYESSLWSDAVEAMATESAAILT RAELDVFLNAELFARLESVSTAALNPEDARHHELMVADFAHAGARLTEDSQKRVAAFAEE ISALETEFGQFVLAETQESAVHIPHDSELSLAGLPDAQLSTVTSHAVQRGLTKDGHTGAL ITLESTTQQPITSDLDDPETRTAVFHASTNRGARGTETDTRWIVSDLTALRAGLAGLMGY KSYKDYVISQQDAGNGENATALVVDLLEPALAQLESELDTIRTTYQPQRLEAEDIAYYLK RYKQDTYQLGSVAEYFDLWNVFNDGVLFAATQLYGVRFERTDETAWHPEVVVYRAFDGDR PLGVICVDPFARESKRGGAWMDQLVSPGRVSGLGPVISLTMNIPKPADGEPALLSLDNVR TLFHEFGHVLHGLFANSTYETRSGTSVPRDYVEFPSQLNEMWALHPQVLPHYAVHVHTGE PIPDELVERIKKSQAFGQGFATVEYLAAALLDLSWHSLEPGEQVESVLDFERDVLSGTGF NPLVPPRYRTPYFQHTFALGYSAGYYSYLWSEKLAAYVTEWFNSQGGLNPEAGDAFRTAV LAPGYSTDPGTTITDFFGEQPGVGPLLRRRALPDTQTEVDGSTPEVDGSSVKDAD >gi|294971635|gb|ADNU01000036.1| GENE 22 24559 - 25761 1230 400 aa, chain + ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 3 387 44 413 417 199 33.0 9e-51 MLAGLATFTLLYNTQAILPDLTRDYGITPSGAAMSVSIATAGVGLGLLVAVPISERIGQG RLIRWSVVIAGVMAVGVVFISDWNLFLVARFVMGFILAGLPATATVYLREEIHPSIVSSV IGVHIFGNTLGGLGARIIPSTAIEVFDWLGIEGILGLDKSHSAMFTASLVGLLAGLGCFF LLPPAQGFVQHRDSFSVLVKKLGQAFTDPVLLGLFVVGYLGVGSFIGALNVMGFRLEGDP YFVPIGIVGLIYFVYPLAGWASAIAGKIADRTSLRTVMAFGPLIGLVGVALMVIPNVVCI VAGLAILAIGFFVGHSTAASWVAGRAIRSVGVPAQAASIYMVCFYLGSSVTGNLTPLAWS HTGWTGVTAIIGSHMVLLLIIALILKRTPVAPARNRTVDI >gi|294971635|gb|ADNU01000036.1| GENE 23 25767 - 26138 319 123 aa, chain - ## HITS:1 COG:no KEGG:AAur_1180 NR:ns ## KEGG: AAur_1180 # Name: not_defined # Def: putative amino acid permease # Organism: A.aurescens # Pathway: not_defined # 12 122 307 417 417 68 39.0 1e-10 MFGDGQGFAQLHVFAHVSERHSTPARAEILFCVLAIILVFSVDVTKAVGFSSTGVLLYYA IANLAAFTQDREHRMYPKALQVLGVVLCVAIGFTVSPTGLLLGAAAAVVIVAVMFVSNRR GRS >gi|294971635|gb|ADNU01000036.1| GENE 24 26087 - 27013 728 308 aa, chain - ## HITS:1 COG:MT2055 KEGG:ns NR:ns ## COG: MT2055 COG0531 # Protein_GI_number: 15841481 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mycobacterium tuberculosis CDC1551 # 5 299 14 306 440 193 49.0 4e-49 MMSSLKRSLTLSDAIMIGLGSMLGVGIFVAVAPATAHAGSGIYIALGLAALVAFCNATSS GQLAAQYPVAGGTYAYGRAQLGQAWGLTAGWAFLLGKTASAAAMAMTFAHYALPGAPPLV LSFTAALALIALTTVNILGVSKTATVTKVIVVIVLAGLALFVATSWLSTPAEVTSPSAAY LPSAPLGILQGAGIMFFAFAGYARVATLGEEVTNPSRTIPRAIMWALGLTLIVYVFITFT LTHMLDQETLATSTAPIFDAVQVPWMKLVVQVVAALACLGALLGLMAGLGRTCLAMARDS RNFTFLPT >gi|294971635|gb|ADNU01000036.1| GENE 25 27086 - 28519 1324 477 aa, chain - ## HITS:1 COG:MT0501 KEGG:ns NR:ns ## COG: MT0501 COG1376 # Protein_GI_number: 15839873 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 180 473 123 411 451 216 41.0 6e-56 MFRRLLTSSTIALSLLAVAACSAGTSGDNNPGPGSKAKEPDPEPVVSVVAEATPGEKLQL SVEKGEFVSVELTDDDHKEIPADAGTFETTSATADPSASATDGTETDEADGSAEAGGNLG SNSENDTEETEQAEDTSATDDPSNEPSADPDSTEAPEDGAQGGAADNNPKGTSWESNFTL AGSSSYTWKATTVSPDGNTHESTGTVETAKPKGDGARMRTLLDDDMKVGVGAPIIFNFAH KIPKEYRPGIESRLTVEVTDKDDKPRKVEGAWGWLPDDDGHSRIHYRPKEFWPEHSKIHV SAPVKDVPFSKNSFGAKDMTLDFEIDREQIAVADAKKHRLTVTRSGKKVMDFPASLGAAR SPSYNGMHIVMSKSRNYTMKSERWGYSTPVTHAVRIHNNGEFIHAAPWSAGSQGRANVSH GCVNLSTPNAAEYYESALFGDPVEVVGSSVSLTTDSGDIKDWVYTWEEWQKLSSIKK >gi|294971635|gb|ADNU01000036.1| GENE 26 28940 - 29152 187 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396744|ref|ZP_06806884.1| ## NR: gi|295396744|ref|ZP_06806884.1| hypothetical protein HMPREF0183_2382 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2382 [Brevibacterium mcbrellneri ATCC 49030] # 1 55 7 61 134 92 81.0 1e-17 MCVWVGRVRWFSLQPKSIFLEGCRVTARFSRENVNKTYKSGVYSTLLFEGCRVNGSSHLR GGTVHMKRSG >gi|294971635|gb|ADNU01000036.1| GENE 27 29318 - 31096 1979 592 aa, chain + ## HITS:1 COG:MT0942 KEGG:ns NR:ns ## COG: MT0942 COG1292 # Protein_GI_number: 15840338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Mycobacterium tuberculosis CDC1551 # 44 543 19 517 593 421 48.0 1e-117 MSSALSEEHELEYQVQNKVQDDDSDEVIIEKLKRQGVRISKGGVTPFVFWPSLIVVLAVA IIAIAAPEATGNALVAMQSWIVGTLGWWYMLVIAAFIAFALVVAFSKYGSIKLGQENDKP EFGLLSWFAMLFAAGMGIGLVFYGVGEPLIYATVDPKPGWPEDQAMRGQLAMAQTFVHWG LHPWAIYAVIGLALAYAVHRRGRPVSIRWALEPLLGERVKGWMGDVIDNLAVFGTIFGIA TSLGLGVQQIAAGLAELGVVGEADNRLLVILIVVITFLATLSVVSGLGAGIRWLSNINLS LAGILLISVLLVGPTLFLFQNFIESIGVYLANVLNMTFDVGAYTGDDGATWNSSWTIFYW GWWISWAPFVGVFIARISRGRTVRQFIAGVLLVPSIVGFFWFSVMGGAGIYRQFFGEGDL VNEEGKVVAEAALFHVLSGLPLGSILSVIAIILVAIFFITSSDSGSLVVDMLASGGHPNP PVWSRVLFSVLEGALAIGLLLAGGLTSLQAAALATALPFSVVLLFMCVATLRSFKADMSA IERERLREVYRTISETLVEDFDEKFGRPVDARVDDRIDYRISRTRGAMNRKK >gi|294971635|gb|ADNU01000036.1| GENE 28 31215 - 31955 752 246 aa, chain + ## HITS:1 COG:FN0815 KEGG:ns NR:ns ## COG: FN0815 COG2610 # Protein_GI_number: 19704150 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Fusobacterium nucleatum # 15 212 1 203 447 205 57.0 8e-53 MLGLIGVLLALGLLIFLAYRGFSVLYLAPITALVAVAFAGLPLVATYTQIFMPAVGKYII TYFPVFALGAIFGKLMSDTGFAKAIALWIVNTIGAKRAMLATILSGAILTYGGVSVFVVA FALFPIANQMFRAADIPKRLIPGAIVAGSATFTMSALPGTPAIQNAIPGPFFGTNAFAAP VFGIVAGLIMFVLATMWLGWRAKKLTAAGEGYQDSNTRPGFGEAGENDNNGDTGTSSGTT TSAVTQ >gi|294971635|gb|ADNU01000036.1| GENE 29 32040 - 32657 654 205 aa, chain + ## HITS:1 COG:FN0815 KEGG:ns NR:ns ## COG: FN0815 COG2610 # Protein_GI_number: 19704150 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Fusobacterium nucleatum # 13 192 256 435 447 169 49.0 4e-42 MDFAYLQEETYGKTDISKVGGIWAIVIALFFACLFTLAVGWRHMKDAKESLNQGATGSML PIFNTASEVGFGAIIASVPAFSIVRDAVLSIPGNPLISLAVAINVLAGITGSASGGMSIG LETLGADYLALAQQAGISPEIMHRVAAIASGGMDSLPHNGAVITMLTICGLTHRQSYADM GVVSVVIPIISLTVVLGFTLVFGLV >gi|294971635|gb|ADNU01000036.1| GENE 30 32703 - 33467 677 254 aa, chain + ## HITS:1 COG:DR2549 KEGG:ns NR:ns ## COG: DR2549 COG0596 # Protein_GI_number: 15807533 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Deinococcus radiodurans # 42 245 29 230 278 100 30.0 2e-21 MTSHTHPYAELAARLGGQARCFTTSEGELTGYTAGDLGASTPVILVHGWPEFASCWEPIA RELLKAGHPIIAYDQRGYSPGLRPEALEEYTVEKLVNDLGEVANAAGVDRFHLVGHDWGG VMGWAAVPHMPDRTATFTSLASAHTRAHGEMIAKDSDQYERMEYLRKIRHHPDQIVTSML RDDAAKLRAVYQGVIPRHVEDSYVQRFSDAEVFAASLKYYRALGLGTDMATQPITVPTLY VWGERGCCVCALFR >gi|294971635|gb|ADNU01000036.1| GENE 31 33648 - 35357 1775 569 aa, chain - ## HITS:1 COG:MT2339 KEGG:ns NR:ns ## COG: MT2339 COG0306 # Protein_GI_number: 15841772 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Mycobacterium tuberculosis CDC1551 # 43 568 25 552 552 647 65.0 0 MHSSLKIHASLPLKLTVSVTICTYDERFVMSASLDEKPGTSATPKTSGFLGPDRWWHIAF GGLMAIALVSFTLWSFGYVDPSANRILLITTIVFGLFMAFNIGGNDVANSFGTSVGAGTL SMKQALVVAAIFEVSGAVLAGGEVTETVRSGIVDLNAIDLAPMDFVFIMMSALLGAALWL LVATRMGWPVSTTHSIVGGIVGAALTLGFVTGSGGWSMVQWSEIGKIVLSWVLSPLLGGV VAWLMFSQIKKHILVFNERMDEKLRELKRERAELRTTHKQAFERLDELQQISYTNAMARD AEVYLRDNYDPEELESDYYRDLHHIEERAKEINAHKALETWVPLLAAFGAVVIGSMMLFK GLKNLHLDIGSVGNFLILGMIAASVWMAVFIFARTLKKQDLSRSTFLLFSWMQVFTASAF AFSHGSNDIANAIGPFAAILDVLKTNSINDEAGVPAAVMVTAGVALVAGLWFIGRFVIKT VGSGLTEMHPASGFTAELAAAGVVMLASVLGLPVSSTHILIGAVLGVGIVNKAANWNLMK PIALAWVITVPAAAAVGAVGVLVLRAIFG >gi|294971635|gb|ADNU01000036.1| GENE 32 35500 - 36321 659 273 aa, chain + ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 1 267 20 289 294 312 55.0 5e-85 MTVPQLTLSDGNTIPQLGFGVWQISTDDIVPAVTTALETGYRHIDTAAIYKNEEGVGQAI AQSGLNREDLFVTTKLWNNRHTDARAALEESLTKLGLDYVDLYLIHWPVPEQNRRLEAWA ALEQAQADGLVKSLGVSNFRESDLYELAKHGSVRPVVNQIELHPTFTQKELSAYNATYGV VTQAWSPLGRAHDLENPAIAQIAERTGRTPAQVVLRWHLQAGRIVFPKSVTASRIKENFQ VFDFALSDVDMAAISALNADNRIGPHPMDLGAE >gi|294971635|gb|ADNU01000036.1| GENE 33 36324 - 36653 398 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395495|ref|ZP_06805690.1| ## NR: gi|295395495|ref|ZP_06805690.1| hypothetical protein HMPREF0183_1188 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1188 [Brevibacterium mcbrellneri ATCC 49030] # 1 109 3 111 111 184 100.0 2e-45 MAEDSSDKHHEAETNAHNALGIAAFIASMSSLLGFAFIGPIAGIIMGGMARKRSREDGLS DNKFGRWGVTWGIIFLIVNVVVTAVIVGILIMSFAQDPYGAPGPNAPAN >gi|294971635|gb|ADNU01000036.1| GENE 34 36692 - 37147 451 151 aa, chain - ## HITS:1 COG:MT2841 KEGG:ns NR:ns ## COG: MT2841 COG0655 # Protein_GI_number: 15842309 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Mycobacterium tuberculosis CDC1551 # 6 151 4 149 150 130 47.0 1e-30 MSTPTVLFVHHSPSPRVEQLAQAVRDVFTLPELDGVTLVEKPALEATTEDVLSADAYILG TTANFGYISGALKHFFDTTYNDVREPTSGRPFSYFIHGGFDTTGAERAMEAITTGLGWKL VAQPVAFTGEVEESHTDAIAEAAGTVAATVM >gi|294971635|gb|ADNU01000036.1| GENE 35 37200 - 38054 422 284 aa, chain + ## HITS:1 COG:Cgl0079 KEGG:ns NR:ns ## COG: Cgl0079 COG0846 # Protein_GI_number: 19551329 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Corynebacterium glutamicum # 108 277 12 182 195 122 41.0 8e-28 MARIKDPLAGLTRPDPSHTDEQIATVLHSMPASDWVVLTGAGVSTDSGLPDYRGPNSPRR TPMTIQDFRASASNRRHYWARSFLGWETILTARPGPAHCELARIAPGGIITQNVDGLHQA AGSDGVIDLHGRLDRVICLQCENLFDRQWVQDELQALNPDFADQLGVPAEMLETAPDGDV AVDDTQDFTVLPCPVCGGDLKPDVVFFGESVPVQRNREAHALAARGRGLVVLGSSLAVLS GLRFVKNAFKEDKPIVVVTDGPTRGDELVTYRSVSRVKDFLPLW >gi|294971635|gb|ADNU01000036.1| GENE 36 38072 - 38680 523 202 aa, chain + ## HITS:1 COG:no KEGG:KRH_18520 NR:ns ## KEGG: KRH_18520 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 1 200 12 208 211 155 46.0 1e-36 MTNFARAERLSVAALLREVGPDAPTLCEGWTTLDLAVHLVIRDRYPAALPANASGKAGKV EFFAKRTAAREAELKDLPWDKLVGMVAAGPGVLSPMGWTPVDVLTNTGEFYVHHEDIRRA RKGWEPRNILPEFEAQLWNVCKPLAHSPSVRKDGPLIVRAPGHGELHVGNTDDGAAVLEG KPSELVLFLFGRRDHAQVSLRS >gi|294971635|gb|ADNU01000036.1| GENE 37 38728 - 38970 258 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395499|ref|ZP_06805694.1| ## NR: gi|295395499|ref|ZP_06805694.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 6 80 1 75 75 156 100.0 4e-37 MDEPHMLAIIIVAACFITAFFGGWYLIHRTMNRPDSYIGAKMVKREEEMRRQQEGSEHLL PNDPRADLPPDTRGTDGKSH >gi|294971635|gb|ADNU01000036.1| GENE 38 39110 - 41794 1767 894 aa, chain + ## HITS:1 COG:ML2335 KEGG:ns NR:ns ## COG: ML2335 COG2812 # Protein_GI_number: 15828258 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Mycobacterium leprae # 5 432 3 443 611 444 56.0 1e-124 MSTALYRRYRPDTFADVIGQDHVTGPLKAALDNGRVNHAYLFSGPRGCGKTTSARILARC LNCEQGPTSTPCGQCASCRDLATGGPGSLDVVEIDAASHNGVDDARDLRERAVYAPARDR FKVFILDEAHMVTPQGFNALLKLVEEPPPHVKFVFATTEPEKVIGTIRSRTHHYPFRLVP PDILTAYLTELCQRENVAIGKGVLPLVVRAGGGSVRDTLSVLDQLMAGAGPDGLDYTTAV ALLGYTPDSLLGDIVDAFSAGDGAAVFRVVDRVIESGQDPRRFVEDLLERFRDLIVVGTA PNQARAFLPEAPDDLLERLITQSQQYGAAELSRAADMLNEGLSEMSGATSPRLQLELMCA RVLLPSVESSRRAVVSRVERLERRVGMSPTGRASNVPAAPQTDAGEAPTTEQAPEAVQTP APTPSPAVPQPGGQQGAQSKGNAQKPQADLDSIADFAFAAEELATADQQAESQSQPEAQP QPDSHVQRDREPQRQREVQQRPEPQRQREAPRREEPPMQRQPESQRQPEPQSQQEPQASS GNNEIDAIRRSWPHILDALTGKSRLVRAILSGNAVPQAFRDGVLVLGFNNQWSVASFDRP GNSEKLAQAINEVLGIRANVVIGDVGVDTDVRSHQAEPAPRQHDFSPRQHDSSSQNSPHQ GRQRPTQEEVDAVVGPRAVDQAPVDREKYWNLDADTPANRNRESSDSQEEDHTGGTGHEH PDATETQHKPEEPASYSGYNEPGTSAGQGAVEVPQVVVPPPVEEPEDIDDVLGAYADPNL GYDEPATTHQSAPKQEPGDEPWAELRTRGARTTPNPATTSDAEPAAGQPDSAESEDTAAT GSQGAEQPNADGPDISNYDDYDTESDPEITESRDIGAPVFLRIIGGEILEEVDE >gi|294971635|gb|ADNU01000036.1| GENE 39 41791 - 42405 447 204 aa, chain + ## HITS:1 COG:MT3818 KEGG:ns NR:ns ## COG: MT3818 COG0353 # Protein_GI_number: 15843336 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 4 197 1 199 203 249 59.0 2e-66 MSAIYDGALADLVDELGKLPGIGPKSAQRLAFHILQSPAQQVEQLASALTEVKRRVNFCE ICGNVAEGEKCAICQDTRRDQSVICVVEEAKDVVAIERTREYRGLYHVLGGAIDPMAGIG PDQLRIKQLLTRLQTGDVKECVIATDPNLEGEATATYVIRLLSTVGVNVSKLASGLPVGG DLEYADEVTLGRAFQGRTQVHTSE >gi|294971635|gb|ADNU01000036.1| GENE 40 42531 - 43826 1248 431 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 431 1 421 421 476 61.0 1e-134 MSLVVQKFGGSSVADAESVKRVARRIVEYRKAGHDVVVVVSAMGDFTDDLIDLANQISPL PPARELDMLLTAGERISMAVLAMAIANLGFEAQSFTGSQAGMITDESFGRARIVNVTPMR VKEALENGNIAIVAGFQGVSHATKNITTLGRGGSDTTAVALAASLDADVCEIYTDVDGVF TADPRIVPTARRINHLSYEEMLEMAASGAKILHLRAVEYARQYDVPLHVRSSFSHNRGTW VSDSPIPPTFAPEEEETSMEQAVISGVAHDRQEAKLTVVGVPDIPGKAAEIFRVIAENEI NIDMIVQNISTRDPGRTDISFTLPMTDGATATRVLNDVQESIGFDHLRYDDQIGKLSVVG AGMRSHPGVTATLFNALSEAHINIDMISTSEIRISVVTRADLLDAAVKAAHTAYGLDSDS NEAIVYGGTGR >gi|294971635|gb|ADNU01000036.1| GENE 41 43823 - 44857 996 344 aa, chain + ## HITS:1 COG:MT3811 KEGG:ns NR:ns ## COG: MT3811 COG0136 # Protein_GI_number: 15843328 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 340 1 341 345 389 65.0 1e-108 MSLKVGVVGATGQVGRVMRELLANNPGFDIADIRFFASARSAGSELEFKGRSIVVEDTAT ADPSGLDVALFSAGGSTSKAHAPRFAEAGVTVVDNSSAWRSDDDVPLVVSEVNPDALDRI PKGIVANPNCTTMAAMPVLKPLHDAAGLSRLIISTYQAVSGSGVAGVEGLVSETEAAVPN ARGLALDGKAAGSKATVYTEPIAFNVLALAGDMVDDGEGETVEEKKLRNESRKILSIPEL LVSGTCVRVPVVTGHSLSINAEFDRDITPDEATQILAQAPGVELEDVPTPLKATGGNTSL VGRIRRDQSVPGNRGLALFVSNDNLRKGAALNTVQIAALLDQRK >gi|294971635|gb|ADNU01000036.1| GENE 42 44954 - 45994 961 346 aa, chain + ## HITS:1 COG:Cgl2577 KEGG:ns NR:ns ## COG: Cgl2577 COG0803 # Protein_GI_number: 19553827 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Corynebacterium glutamicum # 17 344 16 313 317 121 33.0 2e-27 MKSLRIASVAVCAAGALVLSACGSQSGDSGGDKLNVVTSTNVYADIAQTVGGDAVDVTPI IDDASKDPHSYEATTEDQLKLSKADVVVQNGGGYDAFMTTLLEASDSEPEVVDAVSVSGL PGSAGLSNEPHGHEGHDHGEEGHEGHDHGEEGHEGHDHEHGEEDHDHEGHDHGAFNEHVW YSVPTMIKLVDEVAETMSEKSPEHKDEFTKNADDLRGKLEELNKKITDAQSQNKGKKAAA TEPVPLWLFEDMGLEPVTPPEFLSAIEEGNDAPPLVFKKAQDQLKNKEVAILGYNTQATN EQAESLKKAADDAGIPVVDMAETMPKDSNYVDWISGYVDEVNSALK >gi|294971635|gb|ADNU01000036.1| GENE 43 45981 - 46811 752 276 aa, chain + ## HITS:1 COG:ML0336 KEGG:ns NR:ns ## COG: ML0336 COG1121 # Protein_GI_number: 15827092 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Mycobacterium leprae # 22 261 30 273 275 238 51.0 7e-63 MPSNKHESPSRNSVLEIRDGLLKFGERVLWHDLNLEVEPGEFIAVLGPNGSGKTSLLKVL LGQYKLSGGSIRVGDHGVRKGDPDIGYVPQQRSVDPATPLRARDIVALGVDGHRWGLRLP SSKFKKRIDHLLDLVGAGDYADAPVGTLSGGEMQRLRLAHALASSPRLLLCDEPLLSLDI PHQHLVASLLDKERKANDTAILFVTHEINPILRYVDRIIYIVGGHFLVGTPSEVMNSEAL SHLFDSKVEVLNIGGRLVVVGGDEQHHHPEPESAKQ >gi|294971635|gb|ADNU01000036.1| GENE 44 46820 - 47704 956 294 aa, chain + ## HITS:1 COG:Cgl2579 KEGG:ns NR:ns ## COG: Cgl2579 COG1108 # Protein_GI_number: 19553829 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Corynebacterium glutamicum # 14 282 16 281 293 183 47.0 4e-46 MTQLFTFEHYGELVVLLRNSILASAVLGMVGGLVGYFVIIRDIPFAVHGVAELSFAGAAF ALLVGFDVVFGSIVGSLIAAFLIGAGGVRASDKNSIIGVLMPFGLGLGILFLALYEGRAA NKFGLLTGQIVAVNPGQLKVLMVCAAVVVVALAVIWRPLAFASIDAEVARARGVPIGFLT ITFMLVLGLAVALSVQVVGVLLVMALLVTPAAAATQISANPYLVPVLSVVFATVSSVGGV LIALGSPVVPISPFVTTISFLIYAVCRLIGRSREKRYARQRNRRLAELDVEHRV >gi|294971635|gb|ADNU01000036.1| GENE 45 47756 - 48652 606 298 aa, chain + ## HITS:1 COG:MT3785 KEGG:ns NR:ns ## COG: MT3785 COG1408 # Protein_GI_number: 15843301 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Mycobacterium tuberculosis CDC1551 # 12 295 12 297 319 228 46.0 1e-59 MDTKKILRVIAGAGVTGAVAAGVWGACIEPHLFTVRHQTCPVLPPGSKPLRVLHISDLHV APWQKHKINWVRSLAQLQPDLVINTGDNFGFNSLETVIHTLNPLTAFPGIFVFGSNDFHS PALKNPARYLMGPSEVKESEPDLPADDLRRALTLRGWNFVDNCNATVEANGLTVRASGVG DAHMNNAHLSAQHPSFQPGADLNVGVTHSPYSASVDALIHAGAHIVFAGHTHGGQIRIPG YGAPVTNCDRPRDEARGLFTRSGVPVHVSAGLGFSIFAPVRFACPPEVTLLKLVARES >gi|294971635|gb|ADNU01000036.1| GENE 46 48710 - 50986 1895 758 aa, chain + ## HITS:1 COG:Cgl0279 KEGG:ns NR:ns ## COG: Cgl0279 COG0744 # Protein_GI_number: 19551529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 16 715 7 689 795 250 31.0 1e-65 MVSSASNKKPNRLSLLLQFIAVSAIAGIVGAGLAIPSVGVASVGAKNAADIFNSLPAELE ERPLAEQSKMLAADGSLIASFYWQNRKEVHIDDISQHMQDATVAVEDERFFKHGGVDLQG IFRALVHNTFSNSKQGGSTLTQQYVKNVLSENAHSQDDADGVEAATEADGAAGYARKLRE IKLATALEKKYPKIEILNRYLNINNYSGSPRVYGVEAAAHHYWGIKAKDLNIEQSALLAG VVKNPAAYNPERFPDRALERRNIVLGQMLKYDYISQEEYDKAVKTELGLKIHNTPNGCAA AKEAAYFCDYVQRVIENDPVFGKTKEERANVLARGGLTVKTTLNRDMQKAADSTVKKRIP VGDPSGAGHSIVTVEPGTGKVLAMAQNRNYSVAEGKKNVDTQLNYNVDRKHNGASGFQVG STWKPFVLAEWLREGKKLNTTVDATKRTYSAGSWKYDGCPSVGGSWNPNNAGDGGGSSSM TALQATKKSVNTGYAAMGNQLNMCGIMKTAQALGLKYGNGEPLDEPQENWKKERNLYISS MPSSILGTTPVAPIDMAAAYAVFASGGTYCKPSPIDSIKDAEGKDVKAPDPNCHEAIEPG VAKAVAYALTQTFNGGTTSRLRIGAPAGAKTGTTNFEVGHTWLLGFTSTLSTAVWTGDPD GVRDWRKNSKGKVRGRVYGGTISGPSWQSYMNKAIKHTKGNEGFRAPGSMMGSDGGVGGG GNSGPARKPKKPSNNGGGGSSNNGGGGGDGGGVNTIGG >gi|294971635|gb|ADNU01000036.1| GENE 47 51044 - 51205 283 53 aa, chain + ## HITS:1 COG:no KEGG:Intca_0475 NR:ns ## KEGG: Intca_0475 # Name: not_defined # Def: hypothetical protein # Organism: I.calvum # Pathway: not_defined # 1 50 1 50 52 85 82.0 7e-16 MQKWEYVTAPLLIHNTKQILDMWGEDGYELVQVVPGPDGQGLVAYFKRPKQEG >gi|294971635|gb|ADNU01000036.1| GENE 48 51208 - 51663 522 151 aa, chain + ## HITS:1 COG:MT3779 KEGG:ns NR:ns ## COG: MT3779 COG0251 # Protein_GI_number: 15843295 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Mycobacterium tuberculosis CDC1551 # 1 151 1 150 151 149 60.0 2e-36 MTVAEKLTELGIQLPEVPAPAGAYVPAVVDGDHVYTSGQLPFVDGELVNPGVLGDSVTVE AGYDAARLCAINSLAAIQSVVGDLDRVKQVVKVVGFVASAPGFDQQPRVINGASELLGEV FGERGQHARSAVGVSALPLGTSVEVEVTVRI >gi|294971635|gb|ADNU01000036.1| GENE 49 51755 - 52675 682 306 aa, chain + ## HITS:1 COG:Rv3040c KEGG:ns NR:ns ## COG: Rv3040c COG0494 # Protein_GI_number: 15610177 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis H37Rv # 51 254 54 264 288 73 28.0 5e-13 MFEGGKRTLTPPQPLPASAIVLIRDSEHGVQMFMTRNVNEPGQDGRNRWDFPSGQVRPSD SRWLPMAGATPERCAQMLRKTNVTRSLAYFVAAGRIALELTDVLVAQTANGTIATEADVT YVRDSRAELFQKKMAFGDVLETRNLEFRPDMLRPWLRWVNTEWQLKRFDTVYFTAVMPPD QSVNFESFTGAWGGWVSPAEVLSMCGEDSSDFISGPVRLICESLLGVPSVAAAMCKIRDV TPITPEVFKKDGTWWVSLDPHADPSERGRTRQTEVVDTSGDEEGEDPQSLTSELEEVDGP ANSSEV >gi|294971635|gb|ADNU01000036.1| GENE 50 52682 - 53488 617 268 aa, chain - ## HITS:1 COG:ML2303 KEGG:ns NR:ns ## COG: ML2303 COG0491 # Protein_GI_number: 15828235 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium leprae # 9 265 28 260 262 128 35.0 1e-29 MEPHIRVTANNPSPMTLDGTNSYIVPSNDLSTVALIDPGPELASHKQALENAVDCATLTA IVLTHHHADHSEMLGTVHEWAPGVPVYAVDETFAQGAPALTSLHPEGHVVAFGSHTNDCL TLIPTPGHTADSISVLHGNTLFSGDTILGEGTTVIMYPEGSVGQYLESMQRISDLVNHTV DLIEPAHGPTIQDPRAVVDYYISHRKDRLNQVSKVVEQAGQIETDATGGISQEYAGRIAD IVYADVPQKLRPAVLSSVSAQLEYLLNS >gi|294971635|gb|ADNU01000036.1| GENE 51 53664 - 54341 593 225 aa, chain - ## HITS:1 COG:ML2302 KEGG:ns NR:ns ## COG: ML2302 COG0664 # Protein_GI_number: 15828234 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Mycobacterium leprae # 4 224 3 223 224 218 52.0 9e-57 MDIEVVRNATLFAGLDEESTSALMKFMKPRSIRRGTPLFHEGDSGDELYIVSTGKLKVGR ESSDGRENLLSVVGPGEIIGELALFDPGPRSSTVTAVSQSEVLSLKHEDLLHWLEERPQA AMNLLKALAQRLRRTNETVGDLVFSDVPGRVAKAILDMKNRFGKPAPDGILVPHDLTQEE LAQLVGASRETVNKALADFAERRWIRLEGRSVVILDLDRLTHRAH >gi|294971635|gb|ADNU01000036.1| GENE 52 54353 - 54493 64 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKRLWYKPTRFEALVTLQQAKCNDLLSVSRAAPGRLFHASDLRIA >gi|294971635|gb|ADNU01000036.1| GENE 53 54503 - 54752 170 83 aa, chain + ## HITS:1 COG:ML2301 KEGG:ns NR:ns ## COG: ML2301 COG0177 # Protein_GI_number: 15828233 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Mycobacterium leprae # 11 80 11 80 253 87 62.0 5e-18 MKSVIPARKRRQFAQETRLAKVRRARKIDRILAQVFPDARAELDFTNPFELLIATVLSAQ TTDVRVNQVTPALFARYPSAHEL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:28:07 2011 Seq name: gi|294971534|gb|ADNU01000037.1| Brevibacterium mcbrellneri ATCC 49030 contig00040, whole genome shotgun sequence Length of sequence - 109565 bp Number of predicted genes - 103, with homology - 99 Number of transcription units - 44, operones - 21 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.077 + CDS 1 - 510 361 ## COG0177 Predicted EndoIII-related endonuclease 2 1 Op 2 . + CDS 503 - 1195 430 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 1200 - 1263 16.3 - Term 1187 - 1252 25.1 3 2 Op 1 . - CDS 1263 - 1670 578 ## Intca_0492 hypothetical protein - Prom 1707 - 1766 1.6 4 2 Op 2 . - CDS 1786 - 3756 1946 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 3874 - 3933 2.8 + Prom 3830 - 3889 1.6 5 3 Tu 1 . + CDS 3926 - 6499 1739 ## gi|295395520|ref|ZP_06805714.1| conserved hypothetical protein + Term 6513 - 6559 6.3 6 4 Tu 1 . + CDS 6714 - 7742 674 ## Tbis_0213 chromosome partitioning-like ATPase + Term 7935 - 7982 2.2 7 5 Tu 1 . - CDS 7793 - 8578 351 ## 8 6 Op 1 . + CDS 8241 - 8888 153 ## COG4962 Flp pilus assembly protein, ATPase CpaF 9 6 Op 2 . + CDS 8914 - 9747 355 ## KRH_04650 hypothetical protein 10 7 Tu 1 . + CDS 9885 - 10367 183 ## ML5_0411 type II secretion system f domain protein 11 8 Tu 1 . + CDS 10538 - 10723 331 ## gi|295395525|ref|ZP_06805719.1| conserved hypothetical protein 12 9 Op 1 . + CDS 10915 - 11256 246 ## gi|295395526|ref|ZP_06805720.1| possible Chromosome segregation ATPase 13 9 Op 2 . + CDS 11342 - 11689 256 ## gi|295395527|ref|ZP_06805721.1| conserved hypothetical protein 14 10 Tu 1 . - CDS 11720 - 12391 457 ## COG1802 Transcriptional regulators - Prom 12451 - 12510 4.4 15 11 Op 1 . + CDS 12354 - 12476 62 ## 16 11 Op 2 4/0.077 + CDS 12512 - 13174 637 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 17 11 Op 3 . + CDS 13171 - 14481 958 ## COG0477 Permeases of the major facilitator superfamily + Term 14514 - 14570 18.1 + Prom 14713 - 14772 4.5 18 12 Tu 1 . + CDS 14792 - 17185 1407 ## Bfae_31690 hypothetical protein 19 13 Op 1 . - CDS 17231 - 18217 371 ## COG2801 Transposase and inactivated derivatives 20 13 Op 2 45/0.000 - CDS 18214 - 18966 555 ## COG0842 ABC-type multidrug transport system, permease component 21 13 Op 3 1/0.077 - CDS 18963 - 19892 554 ## COG1131 ABC-type multidrug transport system, ATPase component 22 13 Op 4 . - CDS 19889 - 20137 306 ## COG2002 Regulators of stationary/sporulation gene expression - Prom 20157 - 20216 3.1 23 14 Tu 1 . - CDS 20458 - 22737 1238 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 24 15 Op 1 . + CDS 22787 - 24385 1407 ## COG2890 Methylase of polypeptide chain release factors 25 15 Op 2 . + CDS 24452 - 27217 2621 ## COG0550 Topoisomerase IA + Term 27353 - 27393 7.1 - Term 27071 - 27111 0.1 26 16 Tu 1 . - CDS 27218 - 27967 565 ## COG0095 Lipoate-protein ligase A 27 17 Op 1 22/0.000 + CDS 28019 - 30493 1842 ## COG0125 Thymidylate kinase 28 17 Op 2 . + CDS 30490 - 31683 819 ## COG0470 ATPase involved in DNA replication - Term 31587 - 31629 4.0 29 18 Tu 1 . - CDS 31670 - 32812 1022 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 32969 - 33028 2.6 + Prom 32826 - 32885 1.8 30 19 Op 1 . + CDS 32919 - 33530 407 ## Tcur_1151 hypothetical protein 31 19 Op 2 . + CDS 33532 - 34146 218 ## Tfu_2237 hypothetical protein 32 19 Op 3 . + CDS 34143 - 34475 388 ## gi|295395545|ref|ZP_06805739.1| conserved hypothetical protein 33 19 Op 4 . + CDS 34532 - 34957 476 ## SACE_0457 hypothetical protein 34 19 Op 5 . + CDS 34954 - 36546 1003 ## COG4262 Predicted spermidine synthase with an N-terminal membrane domain + TRNA 36589 - 36661 79.0 # Thr CGT 0 0 + Prom 36590 - 36649 76.0 35 20 Tu 1 . + CDS 36741 - 37658 820 ## AARI_01830 universal stress family domain-containing protein 36 21 Tu 1 . - CDS 37670 - 38275 583 ## COG1309 Transcriptional regulator + Prom 38235 - 38294 5.2 37 22 Op 1 7/0.000 + CDS 38374 - 39987 1563 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 38 22 Op 2 2/0.077 + CDS 39995 - 41947 1830 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 39 22 Op 3 . + CDS 41944 - 43119 1542 ## COG1960 Acyl-CoA dehydrogenases 40 22 Op 4 . + CDS 43159 - 44052 847 ## COG0726 Predicted xylanase/chitin deacetylase 41 22 Op 5 6/0.000 + CDS 44072 - 44587 530 ## COG2030 Acyl dehydratase 42 22 Op 6 . + CDS 44593 - 45417 856 ## COG2301 Citrate lyase beta subunit 43 22 Op 7 . + CDS 45504 - 47534 1503 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis - Term 47492 - 47516 -0.3 44 23 Op 1 24/0.000 - CDS 47562 - 47900 394 ## COG0347 Nitrogen regulatory protein PII 45 23 Op 2 . - CDS 47939 - 49246 1366 ## COG0004 Ammonia permease - Prom 49297 - 49356 6.1 46 24 Op 1 . + CDS 49596 - 50309 751 ## COG0242 N-formylmethionyl-tRNA deformylase 47 24 Op 2 . + CDS 50325 - 51185 766 ## gi|295395560|ref|ZP_06805754.1| hypothetical protein HMPREF0183_1252 48 24 Op 3 . + CDS 51182 - 51754 518 ## COG0225 Peptide methionine sulfoxide reductase 49 24 Op 4 . + CDS 51751 - 53013 1100 ## COG0477 Permeases of the major facilitator superfamily 50 25 Tu 1 . - CDS 52936 - 53127 71 ## 51 26 Op 1 . + CDS 53119 - 56484 3337 ## COG0841 Cation/multidrug efflux pump 52 26 Op 2 . + CDS 56474 - 57253 825 ## COG1266 Predicted metal-dependent membrane protease 53 27 Tu 1 . - CDS 57297 - 57941 639 ## AARI_09170 hypothetical protein 54 28 Tu 1 . - CDS 58043 - 58531 598 ## COG0221 Inorganic pyrophosphatase - Prom 58665 - 58724 3.0 55 29 Op 1 2/0.077 + CDS 58675 - 60099 1157 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 56 29 Op 2 2/0.077 + CDS 60081 - 61094 900 ## COG5282 Uncharacterized conserved protein 57 30 Op 1 10/0.000 + CDS 61201 - 62067 555 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 58 30 Op 2 11/0.000 + CDS 62104 - 62655 715 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 59 30 Op 3 4/0.077 + CDS 62699 - 64882 1287 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 60 30 Op 4 4/0.077 + CDS 64882 - 65448 554 ## COG0302 GTP cyclohydrolase I 61 30 Op 5 5/0.000 + CDS 65445 - 66245 538 ## COG0294 Dihydropteroate synthase and related enzymes 62 30 Op 6 . + CDS 66238 - 67164 310 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 63 30 Op 7 . + CDS 67161 - 67622 539 ## RSal33209_3210 hypothetical protein 64 30 Op 8 7/0.000 + CDS 67619 - 68083 427 ## COG3402 Uncharacterized conserved protein 65 30 Op 9 . + CDS 68092 - 69816 1423 ## COG3428 Predicted membrane protein 66 30 Op 10 . + CDS 69825 - 70718 805 ## COG5495 Uncharacterized conserved protein 67 30 Op 11 . + CDS 70752 - 72254 1546 ## COG1190 Lysyl-tRNA synthetase (class II) 68 30 Op 12 . + CDS 72300 - 72533 121 ## gi|295395580|ref|ZP_06805774.1| conserved hypothetical protein 69 30 Op 13 . + CDS 72502 - 72828 365 ## Mlut_01530 hypothetical protein + Prom 72876 - 72935 2.2 70 31 Op 1 . + CDS 72956 - 75568 2458 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 71 31 Op 2 . + CDS 75591 - 76316 452 ## COG1814 Uncharacterized membrane protein 72 31 Op 3 . + CDS 76317 - 76856 505 ## COG1246 N-acetylglutamate synthase and related acetyltransferases + Term 77020 - 77062 -1.0 73 32 Tu 1 . - CDS 76830 - 77768 481 ## COG1194 A/G-specific DNA glycosylase - Prom 77807 - 77866 1.9 74 33 Tu 1 . + CDS 77807 - 78544 733 ## AARI_01110 hypothetical protein + Term 78597 - 78646 1.1 - Term 78491 - 78527 0.5 75 34 Tu 1 . - CDS 78669 - 81104 1309 ## ROP_10770 hypothetical protein - Prom 81124 - 81183 4.3 - Term 81477 - 81526 5.9 76 35 Tu 1 . - CDS 81552 - 82892 966 ## COG1066 Predicted ATP-dependent serine protease 77 36 Tu 1 . + CDS 82907 - 83245 471 ## COG1359 Uncharacterized conserved protein - Term 83229 - 83272 4.0 78 37 Op 1 34/0.000 - CDS 83274 - 84053 617 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 79 37 Op 2 4/0.077 - CDS 84043 - 85428 173 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 80 37 Op 3 . - CDS 85425 - 86099 562 ## COG4721 Predicted membrane protein - Term 86210 - 86238 0.1 81 38 Tu 1 . - CDS 86243 - 86782 535 ## Caci_2063 hypothetical protein 82 39 Tu 1 . + CDS 86941 - 88236 1202 ## COG1409 Predicted phosphohydrolases 83 40 Op 1 7/0.000 + CDS 88426 - 89922 1842 ## COG2079 Uncharacterized protein involved in propionate catabolism 84 40 Op 2 9/0.000 + CDS 89922 - 90827 1087 ## COG2513 PEP phosphonomutase and related enzymes 85 40 Op 3 . + CDS 90824 - 91942 1135 ## COG0372 Citrate synthase 86 41 Op 1 . + CDS 92048 - 92818 779 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 87 41 Op 2 . + CDS 92873 - 93844 1019 ## COG0248 Exopolyphosphatase 88 41 Op 3 1/0.077 + CDS 93857 - 94765 660 ## COG1082 Sugar phosphate isomerases/epimerases 89 41 Op 4 . + CDS 94777 - 95592 876 ## COG0345 Pyrroline-5-carboxylate reductase 90 41 Op 5 . + CDS 95589 - 96893 1254 ## COG3463 Predicted membrane protein 91 42 Op 1 17/0.000 - CDS 96931 - 97605 548 ## COG0569 K+ transport systems, NAD-binding component 92 42 Op 2 . - CDS 97598 - 99007 945 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 99236 - 99295 3.1 93 43 Tu 1 . + CDS 99113 - 100237 878 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein + Term 100272 - 100313 0.6 + Prom 100239 - 100298 2.4 94 44 Op 1 . + CDS 100359 - 100457 75 ## + Term 100474 - 100510 8.7 95 44 Op 2 . + CDS 100552 - 100818 223 ## Intca_0656 glutaredoxin 2 96 44 Op 3 . + CDS 100903 - 103368 2254 ## COG0373 Glutamyl-tRNA reductase 97 44 Op 4 6/0.000 + CDS 103365 - 104960 947 ## COG1587 Uroporphyrinogen-III synthase 98 44 Op 5 . + CDS 104960 - 105931 858 ## COG0113 Delta-aminolevulinic acid dehydratase 99 44 Op 6 . + CDS 105928 - 106422 302 ## COG1846 Transcriptional regulators 100 44 Op 7 4/0.077 + CDS 106441 - 107769 1155 ## COG0001 Glutamate-1-semialdehyde aminotransferase 101 44 Op 8 4/0.077 + CDS 107772 - 108431 506 ## COG0406 Fructose-2,6-bisphosphatase 102 44 Op 9 13/0.000 + CDS 108428 - 109015 444 ## COG0526 Thiol-disulfide isomerase and thioredoxins 103 44 Op 10 . + CDS 109015 - 109564 347 ## COG0785 Cytochrome c biogenesis protein Predicted protein(s) >gi|294971534|gb|ADNU01000037.1| GENE 1 1 - 510 361 169 aa, chain + ## HITS:1 COG:Rv3674c KEGG:ns NR:ns ## COG: Rv3674c COG0177 # Protein_GI_number: 15610810 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Mycobacterium tuberculosis H37Rv # 2 154 59 211 226 180 56.0 1e-45 VATREDVEAIIRPTGFFRSKAANIIALAVQLVDLYDGEVPRTQKELVKLPGVGVKTANVV LGNAFDTPGLTVDTHVGRLARRMGFTKHTDPLKVEVDLQDLYDPRDLTLVSHRLIFMGRR ICHARRPACGACPIARLCPSYGEGELDEQTAASLFAYGLEYPEGGWNFD >gi|294971534|gb|ADNU01000037.1| GENE 2 503 - 1195 430 230 aa, chain + ## HITS:1 COG:MT3773 KEGG:ns NR:ns ## COG: MT3773 COG0494 # Protein_GI_number: 15843289 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 36 229 75 260 273 119 40.0 4e-27 MTDDTHLRSLLSALPTTITEPHWLGARLARGGSELRDAAVLMLFARGQKPRTLAGKREVA RLDDLSVGDVDVLILQRAATLRQHAGQPAFPGGRKDPEDVSAVAAALREAQEEVGVEPGS VDVLTQIDPIAVPVSRHNVTPVVGVWTEPGPVKVVDTAESTRVYRVSVADLVAPANRGVF YPENRAYTSPVFDVGVLKVWGFTAGLLDFAFTELGWATDWDDRTYMHIDV >gi|294971534|gb|ADNU01000037.1| GENE 3 1263 - 1670 578 135 aa, chain - ## HITS:1 COG:no KEGG:Intca_0492 NR:ns ## KEGG: Intca_0492 # Name: not_defined # Def: hypothetical protein # Organism: I.calvum # Pathway: not_defined # 3 130 31 156 195 66 35.0 3e-10 MTERSLSQLIQDIKDDSQALAQEEIALAKTEAQAGAKNLGIGGGLAVAALFLLFLSSFMA IFALSAVFHEVANLPWWASFLIVFGILVVIAGILVGVAIPLFKKGNPTPTAAIDRGKSVK DAIVRALKNPTGPRY >gi|294971534|gb|ADNU01000037.1| GENE 4 1786 - 3756 1946 656 aa, chain - ## HITS:1 COG:MT3768 KEGG:ns NR:ns ## COG: MT3768 COG0365 # Protein_GI_number: 15843284 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Mycobacterium tuberculosis CDC1551 # 11 650 2 650 651 820 62.0 0 MAANDDVKQNTSSLMDETRTFPPSQQTTSVANVTQDEYQRAADDRLKFWEDNARELVSWD KPFTEVLDWSNPPFAKWFADGTLNVAYNCLDRHVEAGNGDRVAIHFEGEPGDSRSYTYAQ LTEEVCKTANALASLGVKKGDRVAVYLPMIPEAVITMLACARLGAAHSVVFGGFSADALH SRIEDAQAEVVVTADGGFRRGKPSDLKGTVDAALSKSETSVKHVLVVKRTGEDTNMVDGR DQWFHDVVGDQPTTHTPEFFEAENPLFVLYTSGTTGKPKGILHTSGGYLTQAVYTMRAVF DIKPETDVYWCTADIGWITGHTYVTYGPLAAGATQVIYEGTPDTPHQGRWWEIVEKYKAT ILYAAPTAIRTFMKWGEEIPKKYDLSSLRLLGSVGEPINPEAWMWYRRVIGRDELPIMDT WWQTETGAHMIAPLPGVTSLKPGSAQTPLPGITVEVVDDNGQKIGPNQVGLLVIKEPWPS MARTVYGDPERFKETYWSRFEGMYFAGDGARYDDDGDIWFLGRVDDVMNVSGHRLSTTEI ESALVSHPSVAEAAVVGATDETTGQAVIGFVILRGNVQDTDSIEQELRAHVGQEIGPIAK PKRVYIVDELPKTRSGKIVRRLLKNLAENREAGDASTLADASVMDAIAASVNRGRK >gi|294971534|gb|ADNU01000037.1| GENE 5 3926 - 6499 1739 857 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395520|ref|ZP_06805714.1| ## NR: gi|295395520|ref|ZP_06805714.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 71 857 1 787 787 996 99.0 0 MSHPNSPSPWGAPGQGQQPGVPQPGGQPGGPQPGGPQYPGAGQPNGQYGQPGGQPPGAGQ YGQHGQPGGQVPGQVPHQHGQYGQSAPGQGQPVPGQQVPGQSQQDGGSPWGASGSGPQHG GAWQAQGSAPQQPGYGSAPTHPGQQNQGPGGQGQFNQGAGGQPWYGSAPGQPSYGSATQQ PGYGSAPQQAGGFGGANAGVPMPENVGKKAKKPKQPKAPGAGLIGPLTLRDILLLVAGLF ALVALATPGYAIRVQGVSAGAEWFVQRWSAATIGYVVLGVLPILAAAVLTLVNKLTGSIR LIGSLSVDQLISVLCAVALAMNMVWLATMVTYFHVGAVFGVLASIIGFLVGTLTVIPVFG EEFAHRPAADAHPKARPYTKGGVVPAAQLAQGAQAPVVEIHGGQGSQPGSQFAPGQGSQP GSQFAPGQGSQPWAPGQAQAGSQPAGRYGSQPGAHAGPGSQPGSAQGQPWATPSGQSMTA GGNAGHGASAPQNEQQGQHGKHGAQDHQDPGQQGPTGGSQHGEAQKNDDTFHTSDDEQTY LGRHSAQEPRYAQNQPTQAFVTGGKENQASEQPGGPWAQNSSASGSTAGEPQNAGTSQKS DETKKSDELQTAESAPEPNWAHGAGDVNGSGQTTSAAGPNRADESHGNSGVGATGVAAGA GVAAGAAGAGAANDAGTTGAGTAQSQNPWAKPDASADAGSGSVVKDTSEAGSSAQGDSRR EPDARGDAETGVVDDNEPTQYFRPYEYSEQGFEPVNESANGAAGEQVASADQETQLSPAV QPQQEAEEQAQPPAPEAFWFAVPDPRPAVDEVTGNTVFMVTPGEWFLAVQNRGTSFVVHN SEQEEGVLHNVSDVILP >gi|294971534|gb|ADNU01000037.1| GENE 6 6714 - 7742 674 342 aa, chain + ## HITS:1 COG:no KEGG:Tbis_0213 NR:ns ## KEGG: Tbis_0213 # Name: not_defined # Def: chromosome partitioning-like ATPase # Organism: T.bispora # Pathway: not_defined # 2 334 3 339 346 144 35.0 6e-33 MQIVLFTHVQSLIEHCSALADGVGVTLEVRSPDSGGWQNAVLILVGEDVTHASATPGIPS VLVGAEGAGDDVWRAAAKLGVDNVVVLPAGAEWLSQRMIQAVEPPRAPALTHGVIGGTGG AGASVLACAVARQSAESGVSTVLVDADALGGGLDVVLGCENIEGLRWPALASSRGRLRPS TLQDALPRQGNLSVLSWDRTLDEDTSKITEGVFDAVIAASQQAFDFVVIDLPRHAPIEWA ATCHSMTVVTPGRVRAAVATAAVANRLTQVHSSIRVAVRESGRGGVDADLLAKAVGVDLA GTFRDDAALGEKLDRGEGLPRGRTNLAKFASYLFDDVFAEER >gi|294971534|gb|ADNU01000037.1| GENE 7 7793 - 8578 351 261 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRTSAPRHSPTTNLSGRIRNAFFTKSAMDTSPMPSTFACRADNCTTCGCATLNSRESST TNNLWPGSTSANNAPNNAVFPDPVPPEIKKFFRRSNTCNNKSATSGTTVPASTNSLNVNP RCRGILNDNTVTSPDNGGITAFNRTPSGNRTSTSGCESSNRRPPNAANRTANARTSASVP NDTGTRHNPSPWSAHTSRGPFTNTSVVDASSNNGCNGPAPANCAEIFATSSSTAADPKTL PDRASALATAEVVTGPGFSSK >gi|294971534|gb|ADNU01000037.1| GENE 8 8241 - 8888 153 215 aa, chain + ## HITS:1 COG:MT3759 KEGG:ns NR:ns ## COG: MT3759 COG4962 # Protein_GI_number: 15843272 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Mycobacterium tuberculosis CDC1551 # 13 214 145 347 352 169 49.0 4e-42 MEAGTVVPDVADLLLHVLERRKNFLISGGTGSGKTALLGALLAEVDPGQRLLVVEDSREL SVAHPHVVQLSARQANVEGMGEVSMADLVKNALRMRPDRLVVGECRGAEVRDMLTALNTG HEGGCATIHANAASAVPARLEALGALAGMTPESVTSQVSTALDVIVHVTRGPRGRVVSQV AVPVLDSGVISTVPAWELGSGRGPGWSDLAARLRR >gi|294971534|gb|ADNU01000037.1| GENE 9 8914 - 9747 355 277 aa, chain + ## HITS:1 COG:no KEGG:KRH_04650 NR:ns ## KEGG: KRH_04650 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 164 276 135 248 254 75 41.0 3e-12 MFVLVAFGAGLCAAAAVWLFMGPGAGARVRKIFGGSVDGALSGGFGGSGAGRGGGALSGA GRGGGDLEGGRGRFRDRVRAFVMRVRGRGDGAVAVDGSEDSPMIAVIDWAVQLLKVGIEP ARAMTLVADLPDNEVVERVLRKVARAMELGEKPDQALRMYAGELGDEDARILTGMASVWF VSEQAGAPAAEMLASYASTCRDRADAMRERDVALAGPISTVMVLSWLPIMSLGLAVLVGA DLVELVTSVPGALSICGGLVLLVAGRIWMRSMLASAR >gi|294971534|gb|ADNU01000037.1| GENE 10 9885 - 10367 183 160 aa, chain + ## HITS:1 COG:no KEGG:ML5_0411 NR:ns ## KEGG: ML5_0411 # Name: not_defined # Def: type II secretion system f domain protein # Organism: Micromonospora_L5 # Pathway: not_defined # 53 154 140 241 242 62 41.0 6e-09 MWKWAFGQLTLGESQVEQLAFDLDLVAICLRAGLPIPRAFELAARATQDRSGLGRLGRSL ALGSVDNAFAGVQDPVGEHRTVVSLVEFSRSTGVALAPLLSGLASDMRRAERRRRQMAAA KLGVHLVIPLGVCVLPSVILTGVVPVVITLVGDMSAIFVR >gi|294971534|gb|ADNU01000037.1| GENE 11 10538 - 10723 331 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395525|ref|ZP_06805719.1| ## NR: gi|295395525|ref|ZP_06805719.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 61 33 93 93 102 100.0 7e-21 MESKEITRIDLRDETGATTAEYAITTLAACGFAALLVVLLKSDPINAILLDLMQVALRMG Q >gi|294971534|gb|ADNU01000037.1| GENE 12 10915 - 11256 246 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395526|ref|ZP_06805720.1| ## NR: gi|295395526|ref|ZP_06805720.1| possible Chromosome segregation ATPase [Brevibacterium mcbrellneri ATCC 49030] possible Chromosome segregation ATPase [Brevibacterium mcbrellneri ATCC 49030] # 1 113 1 113 113 129 100.0 1e-28 MTAEFAVVLPALVLVLILVVGAGVIGIAQVRVYEAARAGAREAARGEPVHDIEKAAKRKA GPGSTVTVSQGGAFAKVHVKTTLPKALHPIMKDVEASAEARTEGQSDGSIVGR >gi|294971534|gb|ADNU01000037.1| GENE 13 11342 - 11689 256 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395527|ref|ZP_06805721.1| ## NR: gi|295395527|ref|ZP_06805721.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 9 115 1 107 107 144 99.0 2e-33 MRERGTATVMAVALTAVALVLMGAVGFAGRSALIKAHAEGTADLAALGAADAVRGKVPGE PCKVAKEMVEREGLDLADCVARTDLGTVKVEVKAKMPKPLKAIKVTAVAGNPQGY >gi|294971534|gb|ADNU01000037.1| GENE 14 11720 - 12391 457 223 aa, chain - ## HITS:1 COG:BMEI0254 KEGG:ns NR:ns ## COG: BMEI0254 COG1802 # Protein_GI_number: 17986538 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 1 196 30 226 231 69 27.0 4e-12 MANDAYARISEHIESCKLQPGAELTESTLIEIAGTGRTPMREAVLRLTRDCWLETGRSRG VRVPDISVDDQLARLEVRRNLETLAVELATVRASDDQLAEVSLLVSTLKQVPDQSAYQIA LRQCHELIGQLSNNTYLASALVPLQGLSRRFWLISTRDLDEDFSQARVLYVPSLEAVVKR DAQAARESILHLHSHLVESALTWARTRASQSEAEPPSPLPYTK >gi|294971534|gb|ADNU01000037.1| GENE 15 12354 - 12476 62 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCSEILAYASFAMLMAIGYATFTEENSMHPLDILQIYELV >gi|294971534|gb|ADNU01000037.1| GENE 16 12512 - 13174 637 220 aa, chain + ## HITS:1 COG:SA2448 KEGG:ns NR:ns ## COG: SA2448 COG1853 # Protein_GI_number: 15928241 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Staphylococcus aureus N315 # 1 220 1 221 230 246 57.0 3e-65 MKWRPQVEKNPLPYSPFKSSTVPRPIGWLSSVSSEGGENIAPYSQWQNLTFDPPMVMFSA NRYPDGRRKDTVKNAEETGWFVWNMATYELREAVNTSAMALAEHESEWDHLAEFGVTKVY ADNHPIPMVAESPVRFECKYHSTHSIPGNSNVGTIDVVFAHVDTIHIDDSIITPEGRLDI PKIQPIARLGYFDYTVVKEVFEMRVPGSDSDAQAGLEGRS >gi|294971534|gb|ADNU01000037.1| GENE 17 13171 - 14481 958 436 aa, chain + ## HITS:1 COG:PA5530 KEGG:ns NR:ns ## COG: PA5530 COG0477 # Protein_GI_number: 15600723 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 2 430 6 427 435 256 35.0 9e-68 MSFTASGSTRHSRRKIKDMIAVNFGNALEWYDWNIYTIFAVVFASQIFKAGNPTSALLST LAVFAVGFIARPIGGFIFGAVADKVGRKRSLFIAMVVTAVGSLIIAVTPTYAAAGILAPI VLTVARLLQGLAHGGEMGTSVTYLVERAPDNRRGFFGATSWISVVIGTILATLVGLGINT FLSPDQVATWGWRMAFALGGILGLYALVLRRTIEESEHYTATQEINEVTQSPAGQGDASE SSASSIMRGLWIIFVVSASGSLMFYTWLIYLPTHAQQVHQLPPTQTLSASLIAQVIFMAA IFGAGMLGDRVGRKPMVIVFSLLFVILPYPLFGILGSSFVSFLAVQTVALLGVAVLFGVN GALWSEVLPTEVRAKGVATVLSLATAIFGGTAPYVITWLNANNLPNVFPGYLMVMAALTG ITALFMKETKGISLSR >gi|294971534|gb|ADNU01000037.1| GENE 18 14792 - 17185 1407 797 aa, chain + ## HITS:1 COG:no KEGG:Bfae_31690 NR:ns ## KEGG: Bfae_31690 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 549 763 346 555 577 84 32.0 2e-14 MLNPGLEEDVDLYREPSDAVFEAFGTVEREVNDVTIKRAEALASVVVAHLDPMTDDSSEL RTVFNAEAGAAPTVVGQVPSFAGETRVDAFGQVREQAPKVSIDDTVVCVLTPNGGVVSVK DVERLLDSLPSPTVGMLSQFMDCTGPQVITETRRVVTGALFMPKLWALAKTGVVGYDRVA YVSRRLSHLGICVPLFDELLTSRRLDVTFKTFRKHVNEIIAMLTTPKSRNEDAVRNRCVR YWDNGDGTSTVAMTGPTLVMHAYFARLSGCARAVKKNDIDPFIATLSDKDREILVPGESG EKVKLRVGDLGDVEIDDDRLMDQLLFDMAVGAIPSTEVHAKVVPTGQRKPGSVEYGESVD SAGEGANELSSVPVFNDKWEANNAQRVYEMELCISMPINEEWLKAQTNINVTVPVLHFLK DQMPGLIELDLAANGVNVPSGDGQATEDRPPGGTDPGGEPPGVQQSAGMNADGKPQGEDP PDRSGLSGVTQVGDPPREGARTEGAQGDEALNESEQGAGLPEEDGSHETATRENDGNTAR PVLVRERLNVPAMLNNRTPIDDQTADELISRATWVYRMFTDPDTGVVVQSTPTKYRVTAP LKRVIEARSVMCSVPWCPVPARVCEKDHIEPFNHADPKRGGQTVLENLHSLCKKHHQEKT NRRISITTRDDGGLAVGFPRIGTTLVYPPESRINQEQFEQLVQFFDAGKLDVSRSVGGFL DAEHAKAGVAASRQFVTQKEITKPVAAEEAEEAEESADAGSNPGVGRSAEGETARGGRSV WEYAPAPGELVGDAPPF >gi|294971534|gb|ADNU01000037.1| GENE 19 17231 - 18217 371 328 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 55 320 1 251 263 182 43.0 7e-46 MTTHANAALTPRHRLKVARLVVDEGWPISEIAARFQVSWPTVKRWVDRYLSGESMQDRSS RPKNSPTKTSLAVTKRCISLRMRLREGPVQLAVRVGVAPSTVHRILRSARLNRLAYLDRA TGELVRRYEHRYLGSLVHVDVKKFGNIPDGGGWRYVGRRQGEKNRSATPDKPKNKWRDPK LGYAFIHTVIDDHSRVAYSEAHDETATTAVAVLHRAVEWFTDRGVTVERVLSDNGGAYRS HLWRGTCEELSITPKRTRPYRPQTNGKVERFHRTMADGWAYARCYTSEQERRDALADWLH HYNHHRPHTACDYQPPISRLTNVPGQYS >gi|294971534|gb|ADNU01000037.1| GENE 20 18214 - 18966 555 250 aa, chain - ## HITS:1 COG:CAC3268 KEGG:ns NR:ns ## COG: CAC3268 COG0842 # Protein_GI_number: 15896513 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Clostridium acetobutylicum # 57 207 183 333 378 63 25.0 5e-10 MNAYRALLKALWRSQRRDPVGLFFSFGFAPVLVLALGVIFGNDPRPEFGGRGFLDATLPA FASLVLAMTGVLQVPVAMLTLRDTGALRRLSLTPLRRSTFIAASLTVHFVVGIAGMLTAL AIGIGVFGVPMPSHVPGVLAVCLIGLSTFLAVGCALAALYPSATAATGIGNVLMILLMLT SGAFTPLAAMPSAIQQIVKYSPVRWFVEAAQQAWDGDPLAAMIMPVFLLCVVLAVAALVG RWRFQWEPVR >gi|294971534|gb|ADNU01000037.1| GENE 21 18963 - 19892 554 309 aa, chain - ## HITS:1 COG:MA0845 KEGG:ns NR:ns ## COG: MA0845 COG1131 # Protein_GI_number: 20089729 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 10 306 15 319 336 209 40.0 7e-54 MKNVVSCAAVSRNFGSFTALEDVSFKVREGEIFGVVGPNGAGKTTLLNCLEGLDRPSSGH VEVLGCDPIKDQHSLAQQIGVQLQSAALPPRLTVQDALELYSALYERPRPWRELLKDLGI KDKANARVDRLSGGERQRVFVALALINRPKLAFLDELTTALDPQSRRNMWDTVEHVRDSG ATVVLTTHYMEEAERLCDRVAIIDHGRLVALDTVASLIQQHAGETTAKLILSASPSAEFD LNGVPGVTSARTEGRELTIRGTADGLQGVLAALAAHRITVTSMSTTTPGLEDVFLALTGR HITTEEQAA >gi|294971534|gb|ADNU01000037.1| GENE 22 19889 - 20137 306 82 aa, chain - ## HITS:1 COG:CAP0091 KEGG:ns NR:ns ## COG: CAP0091 COG2002 # Protein_GI_number: 15004795 # Func_class: K Transcription # Function: Regulators of stationary/sporulation gene expression # Organism: Clostridium acetobutylicum # 3 78 1 76 76 72 50.0 2e-13 MDMDQTSPPGKYVATVKVGPKGQVVIPKGARELFDIHPGDTLLLLADANQGIALMRQETL DQIVMQAMPSHRAPVDSEGDEG >gi|294971534|gb|ADNU01000037.1| GENE 23 20458 - 22737 1238 759 aa, chain - ## HITS:1 COG:Cgl0307 KEGG:ns NR:ns ## COG: Cgl0307 COG1205 # Protein_GI_number: 19551557 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 16 754 22 775 785 649 47.0 0 MLIDLVTAFGERADRVTHARSFPAREAQFADWPEWVSPEVVHAWQVTGIERPWRHQVEAA QRVWKNDDVVIATGTASGKSLGFWLPVTQAAFESRGALPTKVATTLYISPTKALGHDQLS KLVSLPLQGVRAGSFDGDTSEADRQWVRQHGNIIFTNPDMLHRSILPGHERFRRWFKNLR FVVVDEAHRYRGVFGSHVALVLRRLLRVAALYGARPVVVGASATMADPAGAFGRFTGREA YAVTEDTSPKAAGTFLLWEPPLVAGEEAQRRSTISEATSMLVDTTCAGVRSIAFIASRAG AEALADSVRSQVGRIAPELTTSVAAYRGGYLPEERRALETGLRGGKLRTVASTNALELGI DISGLDVVVIAGWPGTLASLWQQAGRAGRAGQEWLAVLIARDDPLDTYVVHNPEHVFDAP VEAGVIHPENPYVVAGHLLAAAAEEPLTEDDGRLWFGERAVEVARELAEAKYLRARPTGW FWAKAESAAALTDIRGSGGAQVRLVDQATGMLLGTVDDAAAPRQSFPGAVYVHQGETFSV LELDLAERVALVAPATVDYTTQARSVTEIRVVGTEGSRGLPSGCRVFHGAVEVTTQVTGY IMRQNGTGVVLGERPLDLPTQTLRTHAVWWTAPDSVVEDAEVVPGDLPGAVHAAEHASIG LLPLFAGCDRWDIGGVSTARHVDTGQATVFVYDGQSGGAGFAERGFEVFAEWQQATLDAI DACECAAGCPSCVQSPKCGNGNEPLDKDAALRLLREVLR >gi|294971534|gb|ADNU01000037.1| GENE 24 22787 - 24385 1407 532 aa, chain + ## HITS:1 COG:Cgl1871 KEGG:ns NR:ns ## COG: Cgl1871 COG2890 # Protein_GI_number: 19553121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Corynebacterium glutamicum # 11 530 12 503 509 139 27.0 1e-32 MLTIDQTTVNTLRHALHHQRFTPAGLRELWGADIDDALTRNNAAPARWFLTGRTDPLSVM ANLFVCAATMDAEVVRTSLGTHLFDAATATGALLERAGTVHAPFALRAVEVPPGLSGHTD EPAPDPTPDHIWLFSDHGTLVRDEPVAGDFVLGVGGAGRTLLNITPRTPVHTALDLGTGC GIQAIALARHCDHVIATDISARALAFTRANATLNGAHNIETREGSLFEPTPEQFDLIVSN PPFVITPQGHTATLEYRDGGHTGDQLMRTLLAQLPNHLTTSGTACLLGNWEITHATSEDP TQDPETPTDPTHWVPHTVDISVIEREQLTPAHYAETWIRDGGVVPGSSRWNADTAAWLDD FASRGVTRIAFGWIQVRARAVEPEAATDDHPPAPPIRHFESRPGPLGANPGGIAQFLDVR FDLIQWLNQADDNELLDTAFIRNEGVVEHRHFTPGDESPTTITIEVGIGFAREMTVDTAF AGCIGVADGSLTLRAVAHALAQLLDVEPGMLASQLVAQVRDAVVSGILYPNS >gi|294971534|gb|ADNU01000037.1| GENE 25 24452 - 27217 2621 921 aa, chain + ## HITS:1 COG:Cgl0309_1 KEGG:ns NR:ns ## COG: Cgl0309_1 COG0550 # Protein_GI_number: 19551559 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Corynebacterium glutamicum # 4 602 10 608 608 650 60.0 0 MPTTQPRRLVIVESPTKARTIVGYLGDGYDVEASVGHIRDLPQPSELPADMKKGPYGKFA VDVDNGFDPYYRVDPGKKKKVTELKKLLKDADELYLATDEDREGEAIAWHLIEVLKPKIP VKRMVFHEITPEAINRALENTRELDINLVDAQETRRILDRLYGYEVSPVLWRKVRAGLSA GRVQSVATRLVVERERERMKFIPADYWDLDLALSLPDAADGEEFAAKLTTYLSQKVATGR DFDDAGQLKKASSEVVVLGKDDATKLASVLNVGAPLSVSGLETKPYSRRPAAPFTTSTLQ QEAGRKLRMSSRQAMRVAQSLYENGYITYMRTDSSALSAEAVAAARKQVTELYGPEYVPG SPRVYAKKQKGAQEAHEAIRPAGDSFRTPAQVQGKLSSDEFKLYDLIWKRTVASQMADAK GSTATMKISADLSTHLGDGATAGMTASGTVITFRGFLAAYEEGRDASRYDSGDAGSRLPQ VTEGQELAVHSAEAAGHTTAPPPRYTEASLVKRLEELGIGRPSTYAAIISTIQDRGYVRP RGNALVPSWLAFSVVRLLEEHFGGLVDYQFTADLETELDHIAAGELDRTQWLSDFYFGTG AAGATVTDGPDGDQPASDHPGLKPTVDDLGDIDAREVNTVQIADDVTLRVGRYGPYLEVP TDDPEKPKRVSVPDDLAPDELTAEKARELIETQGDGDRELGVDPETGHTIVAKNGRFGPY VTEVLPESDAPAKRGTKKPKPRTASLFKSMDLQTVRLEEALKLLSLPRVVGQDQEGVDIT AQNGRYGPYLKKGTDSRSLESEEQIFSITVEEALAIYAQPKTRGGRKAAAPLKEFGEDPE TKKPVVVKDGRFGPYVTDGTTNATLRKDDSVETITAERAFQLLAEKRAKGPAKKRTTAKK TTTRKTTASKTTAKKSTAKKS >gi|294971534|gb|ADNU01000037.1| GENE 26 27218 - 27967 565 249 aa, chain - ## HITS:1 COG:VNG2536C KEGG:ns NR:ns ## COG: VNG2536C COG0095 # Protein_GI_number: 15791289 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Halobacterium sp. NRC-1 # 18 225 14 218 227 76 34.0 4e-14 MSHHLEYIADTSKGAVRDLGVARALLDDVRNGTRGPTLRIYQPQPTVAFGARDRFAEGFP QATQAARAHGFTPALRTLGGRAAAYHLGSLVLDHMEPASTLYGKTQERFTQFGELYASAL RTLGVDARVGEIPGEYCPGEFSVNAAGRIKIIGTAQRVTNKGWLFSSSVIVTDPQPIRAC LTDVEAALGVEWDPQTGGALSELHPGITVEDVKDAFLTAYATEWDLCETALTSEVIEASR AYDERHRLA >gi|294971534|gb|ADNU01000037.1| GENE 27 28019 - 30493 1842 824 aa, chain + ## HITS:1 COG:BMEI0989 KEGG:ns NR:ns ## COG: BMEI0989 COG0125 # Protein_GI_number: 17987272 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Brucella melitensis # 473 675 2 208 214 156 45.0 1e-37 MDTQTVLSKPHAGTIGHAALEVGAWLVALSSAAISFAIVGIHGFGGAMDISRYGELTQIQ RDGGFNSSFAVPGLLAFFALAVAGVLIPPKKLTQLKESVRSQLLTLFAAATACVSVVVVF IPTFWLTLIVAALLGMLVGVLAAHAPELHTKPWRTGGLAVGIFLLVTYYFELEHGVPAGA HALRWLLFVGAILLIVAALMVLVFPLSSDRDIDDLHTFPHTLAIKRSRGHMSIAFPWACY ALFAVLGALFLLPLPATVDGGYGQGAIGLMTAAVLLGWAAGYESGPTFAPGMTRPRLTAF ALVAAGLLMICAGLIDELSGKAVLMALTAFCVGVGVRAQKYEFSRRVGLAVGALLATLLC GLDLTFDIHLSAVTTWVLSASGVAFSAIGLLAFATGILAIFFFSPMGVRGMGVDLMNAFQ VSGDSSPRATAPAFAVAEDQETRVLPAATTSADEPQDAGANYLAVPEPVTPSTGLFIAIE GGDGAGKTTQIRKLVEHLESRGFDPVIATREPGGTPVGKSIRSVLLDGEAVSKKSEALLY AADRAHHVATLVAPSLEQDGAVVTDRYIDSSLAYQAGGRELSEDDVLALSRWATSGLVPN LTLVLDIDPRVAAERMGNREDANHLDKQSLEFKDRVRAGFLRLAEAEPDRYAVIPAGRSV NEVAEHIQRVVDAIIDGEESADVADTFEPIAPRGVFVGVPTERMSPEDAQKAVDEHRYAE SPQFLTEPIKADGAEDADSAASAESTEDTENAATTVLPQRPKAEGAPKPGGPTRAQAEPE TPETQEKPTDTAEPDPETYRAKLQRQSMIEQQARQRLRDARRNS >gi|294971534|gb|ADNU01000037.1| GENE 28 30490 - 31683 819 397 aa, chain + ## HITS:1 COG:MT3747 KEGG:ns NR:ns ## COG: MT3747 COG0470 # Protein_GI_number: 15843256 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Mycobacterium tuberculosis CDC1551 # 9 379 4 394 404 202 39.0 1e-51 MTAETSSGMSGTVWADLVGQDAAIATLARAASDPQSMTHAWLLTGPPGSGRSNAAKAFAA ALLTPDHGATLSAQAKRALAGTHESMTVISTQKSVISIDEVRDIVGKAQAAPVNADWRVV IIEDADRMTERTSNVLLKAIEEPPPATVWILCAPSPQDVLMTIRSRCRNVNLRIPPVKAI AQLLNTRNGIDPEVATWAASAAQNHIGRAKYLATNADARQVREQILRIPLKFDSLGATVR LAGETLDQATTRASDRTKDRNAQEKEELLRTLGVEPGKNPPPAVRSQIKRLEDEQKRRDS RARNDELDAVFLELLALYRDVLMWGMGEKENVINVGDEQLISSIADSSDPVTTLKQIEVL QLARTRLQTNTAPLLIVEAAFIGLSRPWSPAAQATGR >gi|294971534|gb|ADNU01000037.1| GENE 29 31670 - 32812 1022 380 aa, chain - ## HITS:1 COG:BH0352 KEGG:ns NR:ns ## COG: BH0352 COG0624 # Protein_GI_number: 15612915 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 76 372 70 369 374 195 38.0 1e-49 MSAHPNLSTTTDLELFIHQFHQAVETESPSNDKAALHRSARLFSALGEGLMGEPAQIDVI DGFPHLVWRFGNGPRRVVLIGHHDTVWPLGTIDDMPFTISGGIIRGPGTDDMKGGVLIAM HALKKVKEQLGTLDGVTLLVTADEELGSLTSRDLIEHESAHARASLVFESGGPNGEVKVA RKGVAIYHLNVTGRAAHAGVEPEKGINATVEVASQVVKIAGLHKPEAGTSVVPSFMHSGT TTNTVPANATLSIDSRATSAREQQRVDQALRRLRPVIPGAQLHLDGGINRPPWERKVSAH LFARARKVAQELGHDELKPIMVGGGSDGNFTAALGTPTLDGLGTVGGGSHAVDEHARIAS ILPRVDLTAGLVVDLLTSDQ >gi|294971534|gb|ADNU01000037.1| GENE 30 32919 - 33530 407 203 aa, chain + ## HITS:1 COG:no KEGG:Tcur_1151 NR:ns ## KEGG: Tcur_1151 # Name: not_defined # Def: hypothetical protein # Organism: T.curvata # Pathway: not_defined # 41 203 40 203 203 159 48.0 5e-38 MKFLAFIFLIALIIGAVIYIIATVKKARNRGETYGETQRTPRDPFATEQDTTGDPFKIRA GDMLQFGDDKYFVRGSIHFTEGVYTWHEHFFQADANATRRWLSVEADPDLQMALWQDAPG LSAQAGASVVTYNNMQFRLDESGQANFRTEGTTGLPESGVAYYADYESDDGTLLSFERFG NGAWEASIGRPLPRGSFTIYPGS >gi|294971534|gb|ADNU01000037.1| GENE 31 33532 - 34146 218 204 aa, chain + ## HITS:1 COG:no KEGG:Tfu_2237 NR:ns ## KEGG: Tfu_2237 # Name: not_defined # Def: hypothetical protein # Organism: T.fusca # Pathway: not_defined # 25 201 7 180 181 85 35.0 9e-16 MTVTGLVTGSVTGKATGIHTAPAHIDFVDTRADQLVYSLDELRIMPVLARDFTFTHAGVP LEVELAVLGCSHQVTVRSAGHDWVRETLACLPGREPWVPATDSCAVAHGGQLTFDSTVVK SADFLREVDRIESQLADAPAQCSVQFPGQPGAVTALTCATNRNGVVWRTWHCYPQSGEVV KTRSVLSLDTQLFRDRDQGSGHMR >gi|294971534|gb|ADNU01000037.1| GENE 32 34143 - 34475 388 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395545|ref|ZP_06805739.1| ## NR: gi|295395545|ref|ZP_06805739.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 86 1 86 110 165 100.0 1e-39 MNVLYRLLPDYLNRNEKKGIWISVLVIVVATYVAVGVIFTPGTDPNQCGDYTLKNGSYIY TEGRGDYDREGTSYFYVGCKKARGGWFFGFPGSGSGSGSGYRGGGPGTGK >gi|294971534|gb|ADNU01000037.1| GENE 33 34532 - 34957 476 141 aa, chain + ## HITS:1 COG:no KEGG:SACE_0457 NR:ns ## KEGG: SACE_0457 # Name: not_defined # Def: hypothetical protein # Organism: S.erythraea # Pathway: not_defined # 1 140 1 140 141 111 50.0 9e-24 MVIDLLRDSAGVAMYAVIGLLLMMAGFFIVDLLTPGKLRTLLWEERSKNAALLVGSKALG VSIIVCAAIYASAHDLLAGLVSTLVYGVMGIIVMAVSFLLIDLFTPGKLGDLVHDPELHP ATWVSAATHLGVALIISVALL >gi|294971534|gb|ADNU01000037.1| GENE 34 34954 - 36546 1003 530 aa, chain + ## HITS:1 COG:Cgl2645 KEGG:ns NR:ns ## COG: Cgl2645 COG4262 # Protein_GI_number: 19553895 # Func_class: R General function prediction only # Function: Predicted spermidine synthase with an N-terminal membrane domain # Organism: Corynebacterium glutamicum # 20 527 6 508 513 368 42.0 1e-101 MTTERPQSPEPTFPPIVVKPGWARFTVLFAVFLCAACGMVYKLALIALGSYLLGNTIVQA SIVLSVMVFAMGVGSVATKRLVRWAAMSFALIEVLLSVIGGLSVLLLYMAFAYMDLYMVA LVVCAFIIGALIGAEIPLLMELVQSIRKQRASSAVADLFAADYVGGLLGGLAFPFLLLPL LGLVRGTIVTGAINALTGVVVVLWLFRRSLVRRAKVAVSICLVVALGFLAVAWALADTIE VSARQRLYRDPIVAAERSDYQEIVLTKDPRTSDTRLFLNGDLQFASLDEHRYHESLVHPV MNGKHAKVLILGGGDGLAAREVLKYPEVDSVTLVDLDPAVTDLAKNDERLRAFNKDALND PRMKVTNADAFSWVRRGPSQEFDVVIVDLPDPDDVPTAKLYTIEFYDLVSHVMAPGARMV VQAGSPYFAPEAYWGIGESVAQAGFATTPYHVDVPSFGDWGYFLAAKGAAPEVKVSDAVA PRLSFMTPEVARASVVFPPDRDRGAVKSVKASTLLHPRVLDAERRGWVGY >gi|294971534|gb|ADNU01000037.1| GENE 35 36741 - 37658 820 305 aa, chain + ## HITS:1 COG:no KEGG:AARI_01830 NR:ns ## KEGG: AARI_01830 # Name: not_defined # Def: universal stress family domain-containing protein # Organism: A.arilaitensis # Pathway: not_defined # 6 305 13 319 325 97 30.0 9e-19 MKLSRDSVVVGIDDSESAREAAHFAVAHFADAREIVLVAVIPDGTRPVLPAPGDVTTPYT GSLPAVQPAIPSEEDRKKCEAMLDDLRTQLESTHKDSETTSAPIKTRVMAGDPAEQLATL GDDAGLLVIGHHGADQKFAGRIGRTSRGLPGHSLCPVLIYRPGDAGNSVVVGMDTSEYSS VAALDAADFAVNAGLPLRVVVGVDPLGDSERTHTQTELDLTWLRSEVPGLDVSVEYAQGP AAEVLVAASENARLLVMGKRGLGLFAGMAVQLGRTASQVIDKVNTSLMLVSFRDDPRLAN RRIVD >gi|294971534|gb|ADNU01000037.1| GENE 36 37670 - 38275 583 201 aa, chain - ## HITS:1 COG:MT2581 KEGG:ns NR:ns ## COG: MT2581 COG1309 # Protein_GI_number: 15842034 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 10 197 35 221 231 145 44.0 5e-35 MATSDKGISRQLAKAQRREAIMESAKVLFARHGFLAVSIDDIGHGAGVSGPAVYRHFPSK EAILSELLVGISNYLKAGGGHIVENWKAPSSKDILIKLIDFHLTFAVTESELIRIHDRDL GSLPLDGQNRVRALQRAYVNRWVSVLTSMSDLTRDEATVRVHAIFGMLNSTPYVVRRKPE EVIREQLRRAALASLEIDPDE >gi|294971534|gb|ADNU01000037.1| GENE 37 38374 - 39987 1563 537 aa, chain + ## HITS:1 COG:MT2577 KEGG:ns NR:ns ## COG: MT2577 COG4799 # Protein_GI_number: 15842030 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Mycobacterium tuberculosis CDC1551 # 6 537 2 529 529 783 72.0 0 MRAIGTPPDPSTAEEFAHAHSQLIEELRARTAQTALGGSERSRQKHLDRGKLLPRDRVER LLDPGSPFLEFSALAANGMYNDDSPGAGIITGMGLVNGRICVIVANDATVKGGTYYPMTV KKHLRAQEIARENKLPCIYLVDSGGANLPNQDDVFPDREHFGRIFYNQATMSAAGIPQLA AVMGSCTAGGAYVPAMADESIIVNEQGTIFLGGPPLVKAATGEVVTAEELGGGALHARTS GVADHLAANDDHALEIMRDIVATLPAAPAPAWERAEPQEPKYTSDELTQVVPADLKTPYD VRQVIARIVDGSEFHEFKAEYGNTLITGFARIDGHPVGIIANNGVLFGESAQKGAHFIEL CDQRDTPLVFLQNITGFMVGRDYEAGGIAKHGAKMVNAVATARVPKFTVIIGGSYGAGNY SMCGRAYSPRFLWMWPNTRISVMGGEQAASVLATVKRDQMEARGEDWPVEEENAFKAPVL QQYEDQGNPYYSTARLWDDGIIEPSQTRQVLALALEAARYAPLERPLNSAGYGVFRM >gi|294971534|gb|ADNU01000037.1| GENE 38 39995 - 41947 1830 650 aa, chain + ## HITS:1 COG:MT2576 KEGG:ns NR:ns ## COG: MT2576 COG4770 # Protein_GI_number: 15842029 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 644 1 652 654 610 55.0 1e-174 MFTKILIANRGEIALRVIRTCQRLGVQTVAVYSDADAHAPHVKLADQAVRLGPAAASESY LKIDRVIEAAQSTDAQAIHPGYGFLSENAQFAAACEDAGIVFLGPTASAIRTMGDKITAK QAVASRGVPLVPGVAESGLSNDQLEKAALDVGMPVLIKPSAGGGGKGMHAVFKQEDLRES LEAARREAASSFGDDTLFLERLISTPRHIEVQVLADEHGNVIHLGERECSLQRRHQKVIE EAPSALLDEETRARIGQAAVETARSVGYRGAGTVEFIASADNPDEFFFMEMNTRLQVEHP VTEQVTGVDLVEWQLRIGAGEELTLKQEDITLTGHSIEARIYAEDPARGFLPTGGTALDV VFGNDNDPGLRVDAGLEPGQTIVSDYDPMIAKVITTAPTREEALAKLDDVLAHSAVPGIV TNIDFLRMLITRDDVIAGDLDTGLIDRLTEDDLAHAPQPVDALLAAVAVTRGVGQRQRAT TSAPSAWNATGWRNAAPINERVDLIYQGEPVDAVYAGEPARVRPVGTGAEVVVTCCGADH RALVWVTPANVWVASTRGVFMFGRPQADTTLGVAGAGASITAPMPGAVTSVRVADGDPVE EGQPVLVLEAMKMEHVLRAPVTGVVQLSTVAGAQVALDEVLATVVEEEEQ >gi|294971534|gb|ADNU01000037.1| GENE 39 41944 - 43119 1542 391 aa, chain + ## HITS:1 COG:MT2575 KEGG:ns NR:ns ## COG: MT2575 COG1960 # Protein_GI_number: 15842028 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 7 390 11 393 394 514 72.0 1e-146 MITFMPGQLPEEYESLRQQVAKFSDEEVAPVSAELDAKHEFPYKLVAKMGQMGLFGLPFD EKYGGMGGDYFALCLAIEELARNNQSLAITLEAGVSLGAMPIYRFGTEEQKQEWLPKLTD GSGLAAFGLTEAEAGSDAGGTKTKAVLENGEWVINGSKQFITNSGTDITRLVTATAVTGT RTGRDGKEKPEISTIMIPTGTPGFTAEPAYDKVGWNSSDTHPLTFDNVRVPEENLLGERG RGYANFLRILDEGRIAVAALSVGAAQGCVDESVRYAKERVTFGKPIANYQGIQFKIARME ARVVAARAAYYLAASRMESGLPFKKEAAVAKLIAGDAAMDNARDATQIFGGYGFMNEYLV ARHYRDSKILEVGEGTTEVQYMLIARELGLA >gi|294971534|gb|ADNU01000037.1| GENE 40 43159 - 44052 847 297 aa, chain + ## HITS:1 COG:CAC0090 KEGG:ns NR:ns ## COG: CAC0090 COG0726 # Protein_GI_number: 15893386 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 95 296 87 292 293 109 31.0 5e-24 MKRAIFSSVVVGALVLSGCGTNGSESTSGSGQGAPTTSASSESTPTPTPTPTPDPTELKP GTNHSYEAAEYAYEAKDVHNWLHEEKTEAANYPKKKIAFLTFDDGPTNITPKVLKELKKA GAPATFFVIAGELGVEGPDGDKHLKQTIEDGNSVCIHTYSHKYSYLYPGRQANAENISKD YDKALTSVRNVLGEDYEVHGHRYPGGHGWRKMGAADKALEKKGSYWIDWNSENGDGTDSA SSTGEGRAKQALSTLTDSPNVAVILMHDFQDNDATAEGIAPLVKELKKRGYEFGVIN >gi|294971534|gb|ADNU01000037.1| GENE 41 44072 - 44587 530 171 aa, chain + ## HITS:1 COG:MT2574 KEGG:ns NR:ns ## COG: MT2574 COG2030 # Protein_GI_number: 15842027 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mycobacterium tuberculosis CDC1551 # 14 160 28 176 185 209 71.0 3e-54 MTRNTHEEHGSAVVQQRGLWFDEMEVGTIYKHAPGRTITEADNTWFTAVTMNTQALHLDA AFAESEPFGERLVNSMFTLATLVGLSVSQLTQGTIVGNLGFSEVAFPKPLFHGDTLYAET KILDKRLSRSRPGQGIVTLEHIGRNQDGAIVAKAVRQTMVFTSDHAEKNEG >gi|294971534|gb|ADNU01000037.1| GENE 42 44593 - 45417 856 274 aa, chain + ## HITS:1 COG:MT2573 KEGG:ns NR:ns ## COG: MT2573 COG2301 # Protein_GI_number: 15842026 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 7 274 8 267 273 199 47.0 6e-51 MATTVKPAWLFVPGDRKDRYTKAAERSDVVIVDLEDAVSPAHKADARKAFLEFQNSDQAL DPTKTVVRINPVGSEWFHSDLKLLSELPGSGYSVMLPKVEDTEALEHIRGLKVYALIETV RGVVNVDTIAAHEGVTGLMWGAEDLFASLGGGHSRTAAGDYRAPAVYTRARVLMAAKAHG KLAIDSVWTDIDNLDDLGVEADDAVNCGFDAKALIHPKHVEVVRNAFRPSGEQLEWAHGV IQAASSTDAGAWTYQGQMIDEPLLQQARNILARA >gi|294971534|gb|ADNU01000037.1| GENE 43 45504 - 47534 1503 676 aa, chain + ## HITS:1 COG:Cgl2827 KEGG:ns NR:ns ## COG: Cgl2827 COG5479 # Protein_GI_number: 19554077 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Corynebacterium glutamicum # 147 353 234 440 692 154 43.0 7e-37 MPSSLPRILTSVALTIGLVVAPLPTLGTQAKAPETKTREISVSRGQIKKVETPKAKVSVV GATWQGTTRIEKAEYRSKDHNGQWSPWKELPADDADGPDAGTGEAGKALQGTEPLVVPAG TSVEIRTEQKSDLYVAETGVTGNVRPGGAVAGAAPAHAAGGSQIGGFTYTSRKDWGAKGP RKGCPVEETKVNKAVVIHHTAGSNSYTQAQVPSILRGIQGYHQNGRKWCDIGYNMVVDKW GNIYEARSGGLTDAVIGAHAGGFNTSTFGVSVLGTYNKPASSAVLNSLKKIVSWQGQLWG YDPSTTVKLTSKGGTSKFKEGTVRTLPRVFGHRDVGNTDCPGAGLYGQLAQLRISQPVKP AAPIESKGIQEYYNKHKDETGPPQNPQRKTGKGVLQNFKNGVVYQSKQGVYFTAYSAPTR KVWSQHGWERGRLGFPKSDRYKFGHGWRQSFEGGAIIEHSRGTYPVWGGIQSNWERSKGA VKYPVSVETKISGKKPGSFQHFENGSIHWSKNSGAHYTNGGIRNTWSKHRWEQGRLGYPS SDPFKSGDRVRQNFEGGAIIHSKRGTHPLWGGMKSNWERNKATLRNPVSTEKQISGKKPG AFQHFEHGSVHWSKKTGAHYTSGAIRNTWSKQGWEQGRLGYPKTDPYKSGDEVRQKFQGG TVVYHKKRGTRVMWGK >gi|294971534|gb|ADNU01000037.1| GENE 44 47562 - 47900 394 112 aa, chain - ## HITS:1 COG:MT2987 KEGG:ns NR:ns ## COG: MT2987 COG0347 # Protein_GI_number: 15842462 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Mycobacterium tuberculosis CDC1551 # 1 112 1 112 112 140 63.0 6e-34 MKLITAVVKPFTVTEIKTALEQLGIHGMTAWEVRGYGQQQGHVEIYRGAEYAVDFVDKVR IEVLVDNPQLQGALEAIVNTARTGEIGDGKVWVTPVEEVIRVRTGERGVDAV >gi|294971534|gb|ADNU01000037.1| GENE 45 47939 - 49246 1366 435 aa, chain - ## HITS:1 COG:Cgl2012 KEGG:ns NR:ns ## COG: Cgl2012 COG0004 # Protein_GI_number: 19553262 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Corynebacterium glutamicum # 1 433 17 449 454 548 73.0 1e-155 MTPDQVAAASGNASWMLISASLVLLMTPALALFYGGMSRQKSVLNMMLMSFGAIAVVSIV YVLWGWSMSYGSQSILGLFANPFEFFGLRNLITDTNGNFIAGASGYANIIDIGFQLTFAS ISVALISGALAERVKFGTWLGFVALWVTFVYFPLAHMVWGGGLLSHSATGLSAMLFGSTG EEANVAPIDFAGGTVVHISAGTAALALALIVGKRANFMKSPHRPHNVPFVMLGAALLWFG WFGFNGGSAFAADGAAGLAWLNTTVATGAAMLGWLAYERITEGQPTSLGAASGVIAGLVT ITPAAGDLTPLTSIILGVIGGVLGAWGVGLKYKFHYDDSLDVVGVHLVAALWGTIGVGLF ANDRGLLTGGGMEGLKLFIIQVLIAVIAMLVSGLFTALIALLLKSTSGWRVDPKQEFTGI DITTHGESAYDRSIL >gi|294971534|gb|ADNU01000037.1| GENE 46 49596 - 50309 751 237 aa, chain + ## HITS:1 COG:CPn1067 KEGG:ns NR:ns ## COG: CPn1067 COG0242 # Protein_GI_number: 15618975 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Chlamydophila pneumoniae CWL029 # 48 222 9 182 186 103 37.0 3e-22 MNTSTTQPLSNDGCQDNEISAQTIREQVDRALTAATNNDGVIPIVTAGDPVLRTTTARFD GQIDDSTLLELLTAMRTTMLAAPGVGLAAPQVGISLRLAVCEDPGTTSAEHAAARERTPL PFTALINPTYQPATDQLVAFYEGCLSIPGYQAVVARPRTVTLTAHDHQGATITKDITGWA GRIIAHETDHLDGILYLDKAEMRSLATHEQVARWWNQPTTQQAAAALGFELPAPPAL >gi|294971534|gb|ADNU01000037.1| GENE 47 50325 - 51185 766 286 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395560|ref|ZP_06805754.1| ## NR: gi|295395560|ref|ZP_06805754.1| hypothetical protein HMPREF0183_1252 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1252 [Brevibacterium mcbrellneri ATCC 49030] # 1 286 1 286 286 528 100.0 1e-148 MTTYIPDDVPPSHALCRVLDIANAGLSAVRSHHVPAKYQPALRLGTSLATGLVAAGYALN TRDICRTSAGTIAGLGTATAALTYATWGLSDRLYKAVDGRLRAWGIPAPEVATGLAAFIA LRAFSAWEERQESDFEWMAVAGEGYERDLPSDLHDFLTGFAHPELNLTPGAAQALATQIP VLRATIYAPPDQDPLKFLDDCYLELTLPSAADVSVITPRTQTYPVYARASFSGVEHRLNL EVHEGHASALSLAEFDEESPTLSEWISAYRAGVVEFISEFDEERTQ >gi|294971534|gb|ADNU01000037.1| GENE 48 51182 - 51754 518 190 aa, chain + ## HITS:1 COG:DR1849 KEGG:ns NR:ns ## COG: DR1849 COG0225 # Protein_GI_number: 15806849 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Deinococcus radiodurans # 2 187 16 203 206 194 51.0 7e-50 MTQAQPQNQQKSQPHTHHRTITLANGCFWCFDAVVRRARGVIDAVSGYIGGHVDNPTYHQ VCSGTTGHAEAVAVTYDPDMIPEHVILGMFFTTHDPTSLNRQGHDVGTQYRSAMFYQDQD QKERFQRAIDQAQQFYDRPIVTTLEPLSTFFPADNVHQDFYTRNPGNGYCSFVIDPKLAQ ARRQWADWIQ >gi|294971534|gb|ADNU01000037.1| GENE 49 51751 - 53013 1100 420 aa, chain + ## HITS:1 COG:Cgl1113 KEGG:ns NR:ns ## COG: Cgl1113 COG0477 # Protein_GI_number: 19552363 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 5 418 9 404 405 277 44.0 4e-74 MTPKQPKTAIPADIWVMVIAAFIVAIGYGIIAPVLPQFASSFNVGETAAAVVVSAFAFFR LVSAPAGGSLVNRLGERPIYVTGLLIVAASTYAVAFAQTYWQLLIFRGLGGLGSTMFTVS AMAIIVKLAPPHARARATGLYATSFLIGNIAGPIVGGLLAGFGLKVPFIIYGTGLVIAAA VVHVKLASSTRVARAEVRATVSPDDTSPRATSSPTLAPMRVREAWQVPAYRAALLGATVS GWSAMGIRVAIYPLFALSVLKVGPEAAGLALTFFALGNAIAINASSRFADTYGRVPFVSA GFAVMGIATLLLGVWPNLPMFLALSTVAGMGAGLIMPAQQAAIADVVGSERPSGKVLSRF QMAMDFGSIVGPIATAALAQNVSYAVAFAVAGAFCLLASIVWLFTPEPMNKPPARSQQKN >gi|294971534|gb|ADNU01000037.1| GENE 50 52936 - 53127 71 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFHKFLFQVWATAQSYFWDGRNMVRFPYSVREENPYVCLVLLLAASWRFVHGFWREQPHD ACQ >gi|294971534|gb|ADNU01000037.1| GENE 51 53119 - 56484 3337 1121 aa, chain + ## HITS:1 COG:SMa0875 KEGG:ns NR:ns ## COG: SMa0875 COG0841 # Protein_GI_number: 16262933 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Sinorhizobium meliloti # 4 1098 3 1026 1065 331 26.0 6e-90 MKHLVRLSLRNRSLIALVTVVAIIFGTIATFSLKKELFPSFDVPQAIVISQYPGAAPEAV EREVTDPLESALAGVQSVDEVSSSSSTGNSQITVTTKYGTSSDDVVRELQRAVSQVESQL PDGVTPTVVAGSVDDFPVLVMSVSGDDIEKLSKDLEDIAVPEMKKIDGVRDASVSGQTQK QIEIRVKKKRMEDKGVQLDELAQILKTNGVPVSAGELKASNGAAPVEVGKRLTSVDDIKN LYVTGEEDGEPEPVKVSDVADIELKDEPITSISRSNGKDALTIQVLKKPDSNTVDVAEGV KDVLPELEKKIGNNAEFTTVFDQSPYINQSIEDLVREGGLGLIFAVLVILVFLLSFRATA ITAISIPLSLLVTMLAIWRTGYSLNMLTLAALTMSIGRVVDDSIVVIESIRRRQTLGGTK FANIFAAVSEVAGAITSSTLTTVAVFTPLAFITGQTGELFRPFALTTSIALLSSLLVSLT IVPVLAYWFLRARESRVKLTRSDKQEIRSLRKENLKQWKKERKESRKRARAGGTGPRRAT SEMPMVGKTAASVLGEDEGSVAEVDELASLKSPETRLQKTYTPVVRWATRHPVITIVVSV VLLVGTLAMTPLLKTEFLGDTGEETVQAQQTFEPGVGLEEAGKQAEKVEEVLSKTPGVES YQFSIGDAGLSFGSDGGGLSGDYFINLETGASTSEVSADIQKRFDELDGVGELEVMSATS SPGGDSIDLTLTSNDTKALEDGVKKLTEELKDVDGVQTVTNDLQAVQPIVQVSVDAKKAK EKGLTEAQVSEYVQRAIEGQDIGDLIVDSSTRSVKLFDGSADTVKKLEDLKIPYTEQIVQ ASPIPGMPGTPTTEEKTVRLSKIAKVEEIKTAPVIRHSGGLRSAQISVTPSGDNLGQVVQ AVNNKVDETELPSGVTQDTSGVGAEQADAFKQMGLAMLAAILIVFVILVATFKSLIQPLI LLVSIPFAATGSIGLLLLTDTPLGLASLIGLLMLIGVVVTNAIVLIDLINHFRAHGVDLR TAVVNGARLRFRPIIMTAAATIFALIPMALGLTGGGGVFISKPLAIVVIGGLVSSTLLTL ILVPVLYQLIEGFKERRREKKIIKEMARSSVIDKAEARSES >gi|294971534|gb|ADNU01000037.1| GENE 52 56474 - 57253 825 259 aa, chain + ## HITS:1 COG:Cgl2838 KEGG:ns NR:ns ## COG: Cgl2838 COG1266 # Protein_GI_number: 19554088 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Corynebacterium glutamicum # 23 250 2 206 219 96 32.0 5e-20 MKADRSRWGTELALIAAVSLGQSAIYAIVRLVDISTRGPISDAQAKLNTSESIRPLFDLL YQLLGIGFAVVPVALALWLMARDKDTAPSAPSLRTRMGWPGNLRGWLVHILWGAGLFAVI GVGTLGVYFLGRTLGITAQITPNNLNAYWWTVPVLILHAIKNGVLEEVLLLGYATDRLHK MRISPWVAIISLALFRGSYHLYQGIGPFVGNVLMGLLFGYLYFFGPRSIRGSVMPFVWAH TFIDVVGFTAPGILQAVDA >gi|294971534|gb|ADNU01000037.1| GENE 53 57297 - 57941 639 214 aa, chain - ## HITS:1 COG:no KEGG:AARI_09170 NR:ns ## KEGG: AARI_09170 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 1 214 2 214 214 238 55.0 1e-61 MHLDHLSFAAQPDGYQATAERLAEKLGLSFYDGGVHPRFGTRNLIFPLTGGHYVEVVEAL EHPAAFATPYGQAVRARSELGGGWMGWCVRTDDLTSVEERLGRKAVDGNRQAVDGPELEW KQIGVKGLMADPQLPYFIHWLSPVADQPGHWKSPSSDVAIKSLQIAGNRDRVREWLGTDD PKPIPEIGIDWTAPNAAPGLISATFTTPQGEVVI >gi|294971534|gb|ADNU01000037.1| GENE 54 58043 - 58531 598 162 aa, chain - ## HITS:1 COG:ML0210 KEGG:ns NR:ns ## COG: ML0210 COG0221 # Protein_GI_number: 15827013 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Mycobacterium leprae # 1 162 1 162 162 223 67.0 1e-58 MELLATIEIPAGSRNKYEVDHETGRVKLDRYLFTSMAYPTDYGYFEDTLGEDGDPLDVLV LLHESVFPGCQLDARPIGVFKMVDEAGGDDKVLAVLADDPRFDDITDVKDISKFQLDAIE HFFVHYKDLEPGKYVKGSEWAGREEAERIVNESIERFKSEGH >gi|294971534|gb|ADNU01000037.1| GENE 55 58675 - 60099 1157 474 aa, chain + ## HITS:1 COG:Rv3627c KEGG:ns NR:ns ## COG: Rv3627c COG2027 # Protein_GI_number: 15610763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Mycobacterium tuberculosis H37Rv # 95 473 84 460 461 147 34.0 4e-35 MTSRKARRRQEHNRKNGLVITSAGVIVALAGYGALDVADIAPGFLTTKPPIEVQALPQPE PESHSSVDMPALADDAPVPHDLKQRLDPIFDSAKDPSAFSAEVRDAKTGDTLYDKDANRA RTPASVTKVLTATAALDALGPSSRFTTETLLDGDTLFLKGGGDVLLGAGESDPNSIIGHA GLGTLAETTSAFLKDRGRTSVTLRADVSRYEGADFRKKWDRADIGNGYIAPVKPFMVDAG LVKRARFSSREQDPVNRAVKDFEKALKDRGIDVKVEKPQATPESAEKAAQVESAPVSSVI RYMLLHSDNVVAENLGVEVAIKRGDKPGLEASPQAVLNQLKDMKLDTASITLGDTSGLNY DNRISPNELTQIITSVAQREELAELLPNMPVGGLSGTLVKRYDDPETESAAGVVSAKTGT LATVTSLSGVVTTKDGRLLTFTIMADGLERGGAGEARQIVDKAVTVLAECGCSG >gi|294971534|gb|ADNU01000037.1| GENE 56 60081 - 61094 900 337 aa, chain + ## HITS:1 COG:Rv3626c KEGG:ns NR:ns ## COG: Rv3626c COG5282 # Protein_GI_number: 15610762 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis H37Rv # 20 335 22 349 350 167 36.0 2e-41 MWVLRVTEQPFHVPTVVRTGRELVAPGPIPDADTARTLVQDLREAADTSVDLVLRTVNLP REWEDAVRNTVTGDTVLVVDRVGWLTANAQTFAELGASFMTPPKPSIFRINPVVRVGSAQ LGTVLAVLAGRVLGQFDPLGSHRRLMLVAPNVLETERRLEVNPRDFRLWVTLHETTHRVQ FAMAPWLRDYMIERVSILVQKSTQDENWIEALKGGSLLDAITTPDKRQAVNEITAVMSVL EGHADVVMDSCGPSVIPTVARIRRAFDRRRATSVNGLGRLLGFQNKMDQYTTGAAFIRGV VKHRGHAGLHPLWQAPENLPTKAELGNPELWLERIRA >gi|294971534|gb|ADNU01000037.1| GENE 57 61201 - 62067 555 288 aa, chain + ## HITS:1 COG:ML0213 KEGG:ns NR:ns ## COG: ML0213 COG0037 # Protein_GI_number: 15827015 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Mycobacterium leprae # 19 255 53 291 323 125 42.0 8e-29 MSLAAACAFLTRKDYEFVAVTVDHGLQEGSAEVAARTQRALTDLGLTATVETAEVTATSD GLEADARTARYAALDRVAKERGAAGVLLAHTQNDQAETVLLGLLRGSGARSLAGMRPRAG RYIRPLLGITRAETESATTAQNIPVWNDPMNSDPSFTRVKVRTQLMPALAEVAGSGVYAN LARTAHLLAMDSDELESQTDAQAHIRGDTLLHTAAELPAALRTRVIRDWLWQFSPTNEAG FHHVTAIDDLLTGARTGAVSCPPAAEVVRTRAGDVQFRRCDGQAPIYR >gi|294971534|gb|ADNU01000037.1| GENE 58 62104 - 62655 715 183 aa, chain + ## HITS:1 COG:BH0084 KEGG:ns NR:ns ## COG: BH0084 COG0634 # Protein_GI_number: 15612647 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Bacillus halodurans # 8 182 3 177 179 190 56.0 1e-48 MDQRDLGDDIEEILVTETQIKHRLTELAADIDRDYEGKDLLVVGVLKGAVMVMADLARAL HSHVRMDWMAVSSYGSGTKSSGVVRILKDLDTDLKDQHVLIVEDIIDSGLTLSWLLSNLK SRGAASVEICTMLRKPEALKVDIDVRYVGFDVPNKFVVGYGLDYAEKYRNVPFVATLAPH VYS >gi|294971534|gb|ADNU01000037.1| GENE 59 62699 - 64882 1287 727 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 31 631 6 595 636 500 45 1e-140 MANNNNDLKRREPKGPDNKDSSKSSVKKLTRGPVLWIVLAIVIVSIGMMWLSGGGYQRID TKQGLELLNGKTVEQIKVVDGDQRVDMVLTEDYKVDDRNYGKRVQFFYVEPRGDQVIKAI NDADIKKGYTDEVPKRSFLTSLLLNVIPFVIILAVFWFLLSQMSGGAKGIMNFGKSKAKM VNKEHPDVTFKDVAGVDEALEELQEIKEFLAEPKKFTDLGAKIPKGVMLYGPPGTGKTLL ARAVAGEAGVPFFSISGSDFVEMYVGVGASRVRDLFEQAKNNSPAIIFIDEIDAVGRQRG AGMGGGNDEREQTLNQLLVEMDGFDATTNVILIAATNRPDVLDPALLRPGRFDRQVNVEV PDMKGRQHILGVHARNKPLAPEVDLGQIAKRTPGFSGADLANVLNEAALLTARSGRTQID NRILDEAIDRVIAGPQKRTRLMNDKERLVTAYHEGGHALVAAAMNHTDPVTKVTILPRGR ALGYTMVLPSEDKYSTTRNELLDQLAYAMGGRVAEEIVFHDPTTGASNDIEKATSTAKKM VTQYGMTQSVGMVKIGDVSSEPFAGRGQGAEAHASDETYRQIDLEIRALVDAAHADAYRA LNENRDILDRLAHELLEKETLDQAQLAEIFAEVKKAPKRDVWLADPSRPVSDIPPIAVPE RVRPENPEVWEAPLDAPQTQPGDSGQPPIDTHPNPGNQPPHTGPGAPEPGAGPQPGPGDQ QPPWTDR >gi|294971534|gb|ADNU01000037.1| GENE 60 64882 - 65448 554 188 aa, chain + ## HITS:1 COG:MT3713 KEGG:ns NR:ns ## COG: MT3713 COG0302 # Protein_GI_number: 15843221 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Mycobacterium tuberculosis CDC1551 # 3 184 17 199 202 252 71.0 3e-67 MVDQPRIEAAVREILYAIGEDPNRDGLQETPGRVARAYAELFAGIGQDPAEVLSTTFEIG HDEMVLVRNIEMFSTCEHHLLPFHGVAHVGYIPNTSGRVTGLSKLARLVELYARRPQVQE RLTGQIADALMEHLEPRGAIVVIEAEHLCMSMRGVDKAGASTITSAVRGSLRKPTSRAEA MSLIRGTT >gi|294971534|gb|ADNU01000037.1| GENE 61 65445 - 66245 538 266 aa, chain + ## HITS:1 COG:ML0224 KEGG:ns NR:ns ## COG: ML0224 COG0294 # Protein_GI_number: 15827021 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Mycobacterium leprae # 1 266 6 273 284 226 48.0 2e-59 MKIMGILNVTPDSFSDGGRYFDTTSALDHAHQMVEDGAHIIDVGGESTRPGSARVGEEEE LRRVLPVVTELAKQGIAVSVDSMNASTMRACLEAGARYINDVSAGQMDPDMLRLAAETHS EIILMHWRGLLCDAGAVFHYENVVEEVREELSQRVDAAVDAGVNPGRIIVDPGLGFSKNA QHNWTLMSHLDRLASLGPRLLVAGSRKRFLSSHLEETGAEVDERNLDIATSALTALACHA RAWGVRVHDVRTSAVVASVTERALHG >gi|294971534|gb|ADNU01000037.1| GENE 62 66238 - 67164 310 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 4 280 2 250 278 124 32 3e-27 MGDDRITLTGLKARGFHGVFDFEKREGQDFVVDVVLHADHAQAGASDRLEDTINYADVAQ IVADRVTGEPFDLIEALAWAIAGDLLRVAGSVEVTVHKPQAPIDQDFQDVSVTVRRTGVE RERLQHERRARGGQAVIGVGANMGNPAETVQSAMDALDLHPHITILQRSSLYRSAPVGGV EQDDFINAVMTVEATLSAYELLGVCQGIELAHGRTRDVRWGPRTLDLDLIRFTPHEGLGR GEGLGDAGAELKLTDPVLTLPHPEAGNRAFVLTPWHEIDPSATIDVDGATLTLRERLEEL SDQGVERA >gi|294971534|gb|ADNU01000037.1| GENE 63 67161 - 67622 539 153 aa, chain + ## HITS:1 COG:no KEGG:RSal33209_3210 NR:ns ## KEGG: RSal33209_3210 # Name: not_defined # Def: hypothetical protein # Organism: R.salmoninarum # Pathway: not_defined # 5 146 13 155 177 73 29.0 2e-12 MSQTKPKTLAIAGLLGLALAYMFNFMWETYGQVLPGIPWLAIVGMLILSVVLLVLGLPIK KWNEGDRTRVLDPLKAARVAIMAKAAALAGSSLTGWYAGSAVYLLTTAGGARSSTGAGML LAVAAAAVLMIVGLIVESYCQLPPDDPEGAEPA >gi|294971534|gb|ADNU01000037.1| GENE 64 67619 - 68083 427 154 aa, chain + ## HITS:1 COG:Cgl6021 KEGG:ns NR:ns ## COG: Cgl6021 COG3402 # Protein_GI_number: 19551871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 7 154 3 149 149 106 44.0 1e-23 MNDQIVPVNSKLFYVWLVNGLWFVVVAVVACVMAALFLPWWAPVTVGVLAVIGIVWWVIV AHRQVKNLGYAIRENDLLIQRGIMFRSTTVVPFGRMQFVDVSSGPVSRFFGLATVELHTA SASSDATIPGLPAQDADHLRELLAQRGETHLAGL >gi|294971534|gb|ADNU01000037.1| GENE 65 68092 - 69816 1423 574 aa, chain + ## HITS:1 COG:Cgl0622 KEGG:ns NR:ns ## COG: Cgl0622 COG3428 # Protein_GI_number: 19551872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 25 565 7 459 471 150 26.0 6e-36 MSQENPDAQNTPEAEPDAQPDQLDWHRVHPATPFLDVGLGLIALVVAFVSFSFNQVQDLI QLVVFAVEHGTLDFILKNLAWLLVGVAVFAGVIALNWWSWRVRAYAIDHNAVYSRWGILN KQLRKARLDRVQSIDIRQRFMARIFGMAELTFDVAGGEGSEVTIKFLTKKQAEDLREDML AQVRAVKNEKRAPAEPTAEVAPTSLAPEDIPAHSPHTEAPGTTSADHAKAHRHGAPAGSR ITTSLSTGISTVAEDLTETVDSVLMPYRIKSNVSADGRLLMVPAHRVILSRLVSGTTLAL VLSALVILVAIAVVALLPNSSFSFGGLAGFVGIIAGLASVVRKGFAESNFAVSITGDGLA ITSGLLDTRRSVIPLDRIQAVELTQSILWRPFGWWRATFNLAGTSDTDKGSVLLPVGTLD EVMVLLGLVLPDPGVPEDIHGGDLIREAALKKSKGEPVGQAARMFTHQPASSKWLDPISW KSNVFAFTDTMLVVRRGVLERKVQLVPHARVQSLALEEGPLQSALGLKSISIHSTSGPVH PHIYHFDGADGHALLNDYAERTVHARRVLDGVEA >gi|294971534|gb|ADNU01000037.1| GENE 66 69825 - 70718 805 297 aa, chain + ## HITS:1 COG:Rv3603c KEGG:ns NR:ns ## COG: Rv3603c COG5495 # Protein_GI_number: 15610739 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis H37Rv # 5 232 11 257 303 148 44.0 1e-35 MDQTRLGVGIVGTGRVGAVMGRALREAGHAIVGCTASSEASRDRASAMLPDVPILDVETV VERSELVLFTVPDDILPELVSGLAKLGKFNSGQIVAHCAGRYGTEVLEPSGAIPLALHPS LSFTGTSIDLPRLRQATIAVTAPKPVLPIGQALVVEIGAEPVIVAPADRPLYHAAISHAA NHTVVILSQALELLASVGMENPAQVLHSLVDASVNNTLQSGPSALTGPVSRGDIGTVEAH LEALTEFSLASEGVATRDTYVALARATVARALTNGTITDAQATALLDVLQASSTDPK >gi|294971534|gb|ADNU01000037.1| GENE 67 70752 - 72254 1546 500 aa, chain + ## HITS:1 COG:MT3705 KEGG:ns NR:ns ## COG: MT3705 COG1190 # Protein_GI_number: 15843211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Mycobacterium tuberculosis CDC1551 # 11 500 11 505 505 606 61.0 1e-173 MPTDHEEHLDPEQLRIRKEKRQRMLDAGGEAYPVSVPRTHTLQEIREAYPHLEAGEETDD RAGVVGRVVFFRNTGKLCFVTLQSGDGTRLQGMLSLAEVGQEALDAWKADVDLGDIVFLE GRVICSKRGELSIFASRWEMAAKAIRPLPPQHTELGDEGRMRQRYLDLIMREDARKTVHI RSDVMKSLRKTFDERGFLEIETPMLQTIPSGAAARPFSTHMNAYDMELYLRIAPELFLKR AVVGGLEKVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYSTIGELTKKLIQNAAEEAT GSLHVTLADGTEYDFGGEWATVSMYETLSEECGETVTPETTVDELLAIAKKCDIDVEGVF RGHGKLVEEMWEHFYQDKLWEPTFVTDFPVDTSPLVREHRSKPGVVEKWDLYVRGFELAT GYSELVDPVVQRERFEAQTRNAAKGDDEAMPLDEDFLTAMEFGMPPSGGMGMGIDRLLMA LTGLGIRETILFPLVKPIEN >gi|294971534|gb|ADNU01000037.1| GENE 68 72300 - 72533 121 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395580|ref|ZP_06805774.1| ## NR: gi|295395580|ref|ZP_06805774.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 77 1 77 77 144 100.0 2e-33 MEYVKVLLPSIVVGLIFWYVIRAIIRSDSIERKQMDKYYAQLAESEGASTARPGSHNDQV DQAEGSSHGTHDEGRSH >gi|294971534|gb|ADNU01000037.1| GENE 69 72502 - 72828 365 108 aa, chain + ## HITS:1 COG:no KEGG:Mlut_01530 NR:ns ## KEGG: Mlut_01530 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 102 1 94 100 93 48.0 2e-18 MARTMKVVLTDDIDGTPADETIEFSIDGNHYEIELNSDNAAKFRGAFEPYVSKARRVAGS RTPKKKASSSRVDATKVRDWARDNGFEVSARGRLSSEVIEAYAKSLAQ >gi|294971534|gb|ADNU01000037.1| GENE 70 72956 - 75568 2458 870 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 802 2 803 815 951 59 0.0 MFERFTDRARRVIVLAQEEAKLLKHNYIGTEHILLGLIHEGEGIAAKALEGMDISLEGVR EQVVDIIGEGQQAPTGHIPFTPRAKKVLELSLREALQLGHTYIGTEHILLGLIREGEGVA AQVLVKLGADLGRVRQEVIKLISGYQGKEPASTGAREEGTPSGSLVLDQFGRNLTAAARE GKLDPVIGREEQMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGDVPETLKD KQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDA ASILKPMLARGELQTIGATTLDEYRKNIEKDAALERRFQPIQVPEPTLDIAVQILRGLRD QYENHHKVTITDGALEAAVNLSDRYINDRYLPDKAIDLIDEAGAKLRITRMSEPQEIKDL NEKIAEARKRKEVAIDKQNFELAADERNTEMELTKERDKAEKAWRSGAKGGGAIVDEELV AEVLAKATGIPVFKLTEEESSRLLRMEDELHKRIIGQNDAIKSVSRAIRRTRAGLKDPKR PSGSFIFAGPTGVGKTELAKALAEFLFGDESALISLDMSEFSEKHTVSRLFGSPPGYVGY EEGGQLTEKVRRRPFSIVLFDEVEKAHADIFNSLLQILEDGRLTDSQGREVDFKNTIIIM TTNLGTRDINRGTPMGFQADNDTSTSYDRMKQKVNEELKQHFRPEFLNRVDDTIVFPQLQ KAEIVEIVDLFLTRLDTRLADQGMSIEVSDDAKNALADRGFDPVLGARPLRRTIQQDIED PLSEKILFNELHSGQRIYVDVEGEGPLATFTFRGEMDDRVLTRSKDEKDNTGAIPEAGLA NEEAGKPDVTDDTDGAGGKAVAQANQTTEE >gi|294971534|gb|ADNU01000037.1| GENE 71 75591 - 76316 452 241 aa, chain + ## HITS:1 COG:L104065 KEGG:ns NR:ns ## COG: L104065 COG1814 # Protein_GI_number: 15673456 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Lactococcus lactis # 21 237 10 226 226 150 38.0 3e-36 MSENLVPAQHDREPHGTNTGQRLNWLRAGVLGANDGIVSTAGVVIGVAGATTSIPAIATA GLAAVAAGAFSMAGGEYVSVSTQRDTERALIEKERRELAEMPDEELAELAHLYEQRGISS ELAMQVAKELTEKDALRAHAEAELGIVPDEYTSPWVAAFSSFVAFTVGALIPFVVILLPL GDARVWATAFSVVVGLALTGWLSATLGQAPRVPAVLRNVIMGTVTMVATYAIGATFGTVV G >gi|294971534|gb|ADNU01000037.1| GENE 72 76317 - 76856 505 179 aa, chain + ## HITS:1 COG:MT2818 KEGG:ns NR:ns ## COG: MT2818 COG1246 # Protein_GI_number: 15842287 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase and related acetyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 11 173 1 164 164 165 52.0 4e-41 MKSTKLESGLLIRPARTSDVAAIRALCQPLIDERILVPKDHVNYFENIQEFMVVTDPDGT LAGCAALHVFWEDLAEVRTVATSAQFRRRGVGRALIESLLQRAKDLGVDRVFCLTFERDF FASLGFEQITGTPVSPEVFVELLRSQDEGTAEFLDLARVKPNTLGNYRMMISLGQAENA >gi|294971534|gb|ADNU01000037.1| GENE 73 76830 - 77768 481 312 aa, chain - ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 1 241 1 249 293 239 50.0 7e-63 MTHQKVARALTDWFASAQRPLPWRAADTSAWAVLVSEIMSHQTPMSRVEPVWRDWMERWP TPRALADAPTAEVLVAWGSLGYPRRALRLQECARAIGDGEVPRTEEGLLALPGVGPYTAA AVASFAFGERTIVLDVNVRRVLSRVFAGVDHPKPALSKKEHAWARQFVPKDHHVEFNATA MELGALVCTSRNPSCHECPLAEHCAWLKAGQPKSGVRPKTQAWHGTDRQLRGAIMTVLKE SAVQGSTLREDYFTAPAADFEDTVITGLPEAVGSSLTRVRALGTHDRIARLIDDLVSDGL ATRNSGVLSLPQ >gi|294971534|gb|ADNU01000037.1| GENE 74 77807 - 78544 733 245 aa, chain + ## HITS:1 COG:no KEGG:AARI_01110 NR:ns ## KEGG: AARI_01110 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 5 226 2 205 205 90 30.0 7e-17 MSQNNNSRAGRLPASVYRRRRITVLGLSVVVLALFTVGIVLLAQGLTKNTAGPGEPQVQA GSGNEQGGDGSQGGAGESDGSDGAGGESAEPGPDEASGKCPTEAVEISAKTDKPSYKPNS VIKLELGVTNKHNASCAIDVGPQKQTFTVKKDKDTVWSSAFCVSGKQKDQTQVFVAGANK KSVLPWDMIPTDDKCNRTKDTLDPGEYTLVTKLGDIESQPAKFVVEKPEEKKPAGEDKPQ DKEQN >gi|294971534|gb|ADNU01000037.1| GENE 75 78669 - 81104 1309 811 aa, chain - ## HITS:1 COG:no KEGG:ROP_10770 NR:ns ## KEGG: ROP_10770 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 549 697 225 394 421 87 32.0 3e-15 MTTTHADTRNDLYDGPAVELFETVKDTTCLLDEAQVKQAEAVAAVISAHIVPLDDFTHGL HAVFTSNPGAGPLVTGGATNETVRASSNAGAIASRGGSVGVDDVVACVVLPTGEVATVAS VERVADELPTPTEGVLAKLLDCTRSQLVTRVRKIMTAVVLMPKLWSLAKQGVISFDRVLY TAGRVVRAGVCIPVFDDMLTNKRVNVPWKTYRRHVNEILAMLMTPETQVENARRNRGVTY WVNDDGTATLSLTGPVLEMEAFYQRVRGTARAILANHIEPFTATLTDEQQALFITEGNGE TTEVRVGDLGRVEVDDDRLMDQLTLDLITGAKPSTTLRVRVTPTGKHAPITVTNTKDAFG PGVPGAESDGVFQAGGPGMDTRSDAAGPGPGESGSVWAEKREVKQAEDVYELELCVSMPE KDEWLKAQAGITVTIPVLHFLTHLPPPGTERIPEEQRPERQRPGKDPGADKHRPESDQGF RRNQTDERIYEDQGSSAPPGTDVPPGGGATLNPEEFLNADEPQIAGASVGSGSELDFGLP IKVDPDVRVPVMMNGRVPLDAKTADELIAQAKWVYRMFTDPETGVVLESTPTKYYIPAAL KRMVEARHPDCSAPWCATPARVCEKDHIEPFNHQVPESGGLTVMENLHPLCKRHHQEKTQ KRLRVDKMDDGSLAWVFPRIGAMLVYPPESRINQLQYERLLEYFDTGDQDISHTINEYQA TEHQTAPTPEDVATQESGHETVHGEAIWQCATEREYVQKASNMRSPAPGTAESPEQAYEY PREIADEYAIAGEVFNGDTRPWQPSEEPPPF >gi|294971534|gb|ADNU01000037.1| GENE 76 81552 - 82892 966 446 aa, chain - ## HITS:1 COG:NMA0992 KEGG:ns NR:ns ## COG: NMA0992 COG1066 # Protein_GI_number: 15793949 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Neisseria meningitidis Z2491 # 3 442 9 453 459 382 46.0 1e-105 MAYTCSECGSSTPKWMGKCPKCQSWGTLEESAGPGVSVKTQATFSGKRATPVTQVDATTA SATSTGVSELDRVLGGGLVPGAVILLAGEPGVGKSTLLLDVSAKAAKAGRRVLYVTGEES QGQVRLRAERTGALSDNLLLANETDLAAVLGLIEVEDPELLIVDSVQTLASDRVEGVPGG VTQVREVASAVIRAAKARNLPTVLVGHITKDGTVAGPRLLEHLVDVVCSFEGDKHTRLRM LRAIKNRFGPTDEVGCFAMTEEGITSESDPSGLFLSRSQINAPGTCLTVTLDGKRPLVIE VQALTLEAAGGNPRRTVSGMDSNRVAMLIAVASKSMNLARSDVFVSTVGGAKIQEPAADL AVALALASAAADKPQYSRLVAIGELSLSGEIRRVPNVGQRLAEATRMGIDTAVVASGSLA DVTLPQGIRVKEVSNLAQAIELTLKR >gi|294971534|gb|ADNU01000037.1| GENE 77 82907 - 83245 471 112 aa, chain + ## HITS:1 COG:MT1149 KEGG:ns NR:ns ## COG: MT1149 COG1359 # Protein_GI_number: 15840555 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 8 112 1 106 107 108 50.0 3e-24 MTPTLGTMYFIVVKYDVKPESVDQWPEIVREFTEATRAEEGNLFFEWSKSLEKDNQYVLV EGFTDEGAEPHVTSDHFAKGIEAMRPHLLSTPQIVSRQVEGNGFEDMGELKI >gi|294971534|gb|ADNU01000037.1| GENE 78 83274 - 84053 617 259 aa, chain - ## HITS:1 COG:Cgl1056 KEGG:ns NR:ns ## COG: Cgl1056 COG0619 # Protein_GI_number: 19552306 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 10 257 4 249 251 149 39.0 4e-36 MGFEVRSTPLTRTNPLTKIAIMLLITVGVVLSIDVVSASLMMVFVIVFFPLTGFPVKRLF THLWFIPLAAFATGWATVLLAEGAGPVLFNFGPYEVTARSVEVGFALFLRSLAMSLPCVV LAFSIDSTELADSLVQLLKMPERFVLGALGAARLAGLLSEQLETIRFARRARGVAHGGFF GGLRDFLPIAFALLTEAIRRAVRLAMAMEGRAFGTKGRTWTRRVSLGARDWVAMGCAGVL AATCITASVATGNWNFILS >gi|294971534|gb|ADNU01000037.1| GENE 79 84043 - 85428 173 461 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 274 457 150 332 398 71 31 2e-11 MSHLRATDFGWKHAGRKRPALTGISLDIAAGERVLIAGASGAGKSTFLHAVAGVLPSESG TQFGQLLIDGTAPDPTRGRTGLVLQDPDSQAVLSRIGPDIAFGAENLRVPVEEIAERVQW AMETVGLPFPPEWPTAKLSGGQKQRVALAGVLAMRPSIILLDEPTANIDPQSAPGLRDAV IRSADETGATLLVVEHRLDLWAQHVDRMVVLSPTGVIADGPPHHIMETHRQELEDAGLWL SHVRPKRRIMREATGPQLLQVDATVGRQADVNHVAFSLAQGQALAITGANGAGKSTAALT VAGLLRPRAGQVTASPELQAWAPEFPVRSASPHKWKARTLARRIGKVFQTPEHQFVTRTV RDELVLGGVDPDSVLERLRLDHVALAHPSTLSGGEKRRLSVACMLAAPVLIVDEPTFGQD AHSWRELARLLNEAVDGGAALLTVTHDPDFIHAVGADEYGI >gi|294971534|gb|ADNU01000037.1| GENE 80 85425 - 86099 562 224 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 35 218 14 198 201 117 41.0 1e-26 MRLGPPKGVEFLFTPPESLGGYMSSTTEAVKTHTNTWRVVDIVVCAVIAVAVGLLFALWA ALWSGFELLFATTFPPAVALFGGVWVLAGPLAAMIIRKPGAALFCELLAAIFEAVLGSHF GVVAVFSGFLQGLGAELVFAAFRYRKFTLPVSILAAMLAGLFMGVHESIIYLAEWSLGFR VAYTGLAVLSSAVLAGVIPWLLTRMLASAGALNAFASGNTGREV >gi|294971534|gb|ADNU01000037.1| GENE 81 86243 - 86782 535 179 aa, chain - ## HITS:1 COG:no KEGG:Caci_2063 NR:ns ## KEGG: Caci_2063 # Name: not_defined # Def: hypothetical protein # Organism: C.acidiphila # Pathway: not_defined # 11 178 7 174 175 189 55.0 5e-47 MTRTALDYDENWLEPEELNNLRRKLPLTYVHGVPVQVSDSGEVERIGLLLRTLPDQTLGR EIVGGRVRFHETLRNALARHCEQDLGPLALPVFPTSLTPFHVAEYFPTQGVSKHYDPRQH AVALCYILQVRGECTPRQDALSFDWFAPQELLRDDIIADMCHGQHHIVKAALAHLGILP >gi|294971534|gb|ADNU01000037.1| GENE 82 86941 - 88236 1202 431 aa, chain + ## HITS:1 COG:Cgl2858 KEGG:ns NR:ns ## COG: Cgl2858 COG1409 # Protein_GI_number: 19554108 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Corynebacterium glutamicum # 22 372 37 404 539 185 34.0 1e-46 MKITSLATTLGLVALLSAGGLSPALGTDAEVTKKADIYNLGLQVGDRNTDRAFTWYTKKV GKQSVKIAPAKDLVRGKIPEDARRVNEEKSGVSIDRARLFHQAHVTGLKENTTYAYQVGS DKNGWSDVYTFSTPKSFSTNSGEFLAVGDPQIGSGNGEPNDAEGWNRTVTSAAKAHPNAR FLLSLGDQIDTGAGKQYDAFFAPEVMRTLPHMTIKGNHEMLNPVSHNQHFRQPNQKGTGN YWYKDAGVLFIVLDSNNPNWKKHGQFIKDVKADQGSDVNWTVLAFHHAPYSSGPHRDDAD VKRLRKELPKYIAEADVDLVMNGHDHVYTRSYLTNGDGHKVAGARGGSKQVKKKGETIYV TATSSSGSKFYNNKEGADWAAVAKGNKVPGYVGVKAQRCSLRVTAYEVATTGKRGTLDSF TLTDPSNRGCK >gi|294971534|gb|ADNU01000037.1| GENE 83 88426 - 89922 1842 498 aa, chain + ## HITS:1 COG:MT1162 KEGG:ns NR:ns ## COG: MT1162 COG2079 # Protein_GI_number: 15840568 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Mycobacterium tuberculosis CDC1551 # 1 487 26 510 526 629 63.0 1e-180 MINHEVRTYKSSENLPREEQLAYKIAQVAADPVEVDADVTDMVINRVIDNAAVAAASVFR SAPKHAREQSLAHKLEPGSTVFGVSNDTHISPEWAAWANGVAVRELDFHDTFLAKEYSHP GDNIPAILAVAQHKGIGGKDLVNGIATGYEIQVDLVKGICLHEHKIDHVAHLGPSAAAGI GALLHLPTDVIYQAVGQALHVTTATRQSRKGEISSWKAHAPAFAGKMAVEAVDRAMRGEG APSPIYEGEDGFIAWILSGPEARYTVPLPGAGEAKRAILDTYTKEHSAEYQAQALIDLAR RMGREIDDLSQIEKITIHTSHHTHNVIGTGANDPQKMDPKASRETLDHSIMYIFAVAMED QGWHHEKSYAPERAGRPETVELWHKIETREDPEWTRRYHSTDPDELAFGGRVEILFKDGS TKVDEIAVADAHPNGARPFVRENYVQKFRTLAEGIVSEAEQNRFIELAENLPNLSADEIR QLNFVVDGAEEITSKGIF >gi|294971534|gb|ADNU01000037.1| GENE 84 89922 - 90827 1087 301 aa, chain + ## HITS:1 COG:Cgl0675 KEGG:ns NR:ns ## COG: Cgl0675 COG2513 # Protein_GI_number: 19551925 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Corynebacterium glutamicum # 11 297 13 300 305 320 57.0 3e-87 MLGAQTPAHVRREKFRELLAGDKLVQFPGAINPINAQLIEQAGFEGVYISGGAFSAAQGL PDIGLTTLTEVVDHGRNISRVTNLPTFIDADTGWGEAMNVARTVQEFEDAGVAGMHLEDQ VNPKRCGHLDGKEVVSTAEMVKRISAAVKGRRDSNFVLCARTDSRAKEGLDAAIDRAKAY VDAGADLIFPEAMKDLGEFESMANALDVPILANMTEFGKSELFTTEQLANAGVKLVIYPV TTLRIAMGAIKRGLEVIRREGTQESLVDGMQTRADLYDTIDYAAYNEFDAAVFNFSQENH S >gi|294971534|gb|ADNU01000037.1| GENE 85 90824 - 91942 1135 372 aa, chain + ## HITS:1 COG:MT1163 KEGG:ns NR:ns ## COG: MT1163 COG0372 # Protein_GI_number: 15840569 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 4 369 27 390 393 454 62.0 1e-128 MTEDIKKGLAGVVVDSTAVSKVVQETNSLTYRGYPVQELAANCSFEEVAYLIWNGELPNA EQLEEFVARERGQRAIDQKLVDIILGLPKDTHPMHVVQTAVSYLGAVDEQAEDNSPEANQ AKAERLYAQLPTIVAIDHRRRHGLDPVAPTSDLSYAANFFKMVFDEVPADEVVRCFDISM ILYAEHSFNASTFTARVIASTTSDLHSAVAGAVGALKGPLHGGANEAVMAMLEEVGTADK ASAWIDNALANKEKIMGFGHRVYKNGDSRVPTMRAAFEDMVKVKGANDLLDLYNTFEEDF VGRKGIYPNLDYPSGPAYHLMGFDTPQFTPIFVMSRITGWTAHIMEQHANNALIRPLSAY HGEAQREVPTQR >gi|294971534|gb|ADNU01000037.1| GENE 86 92048 - 92818 779 256 aa, chain + ## HITS:1 COG:SSO2624 KEGG:ns NR:ns ## COG: SSO2624 COG1024 # Protein_GI_number: 15899349 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Sulfolobus solfataricus # 12 244 13 258 266 109 30.0 5e-24 MTHDLPLVPGFEYSVENGIAVLTISRVEKRNALSREMWKALPGIAKAVDTDPDVKVLIIT GAGGHFSAGSDIKDLNVPLEEFWQTNSQAEDAIANMDIPTIAAIEGNCVGGGTEIAAACD VRIAKPGSIYGVTAARLGLVYPPGPTKRLAEILGTSWARYILLSAEIVDFDQMNQLGFFH QVSEDPLATAKERAEVIASRSALSQTGAKRILRGDMFEPQGWVKDAYAEEIVRGQEAFFE RRSPDFAINRTDWPTD >gi|294971534|gb|ADNU01000037.1| GENE 87 92873 - 93844 1019 323 aa, chain + ## HITS:1 COG:MT0516 KEGG:ns NR:ns ## COG: MT0516 COG0248 # Protein_GI_number: 15839888 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 1 306 1 305 344 253 48.0 2e-67 MRLAVLDIGSNSIHLLVVDAGVGAPPLPATSHKEVLRLAEHLKEDGSITTYARERLMQFC KEAIEIAEVQGAEQILAFATSALRDAPNGEATIEKIYKETGLTLNVMSGEDEARVTFLAA RRWFGWSAGKLLLLDIGGGSLEMAAGQDEYPDAAVSVPLGAGRMYSEFLNGGDVTTPDQI AALRRHARQLIGRYAGLINRVGQPDNVVGSSKTFRSLARLGGAAPSGSGIYVPRQLRRKD LPGIIDQLASRNAAQRAELPGVSESRSGQVLAGAVLAETAFTIFNIDTMLISPWALREGI IMRKLDLLDSSETLSRPAVALPR >gi|294971534|gb|ADNU01000037.1| GENE 88 93857 - 94765 660 302 aa, chain + ## HITS:1 COG:ML2432 KEGG:ns NR:ns ## COG: ML2432 COG1082 # Protein_GI_number: 15828313 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mycobacterium leprae # 42 296 5 278 280 206 41.0 5e-53 MPHRKAFTRKNSAKKSSVRHREHFAKNPVYEHGVQHVSTERIRIALSTSSVYPMDVPTCF NMAHELGYDGVEIMITHNRTTQNAQLIQSEIRRSGLPVVSFHAPTLLFLPGVLDKDHWRK LRKTCDLALECGAESVVLHPPFRWQGDYATGFVDGVRELVKETGLKIAVENMYPWRAGLR EVLVYYPDWNPLDEDYDHMTFDFSHASTAGMNALETVAEIQDKLAIVHLTDGSGSLRDEH LVPGRGKMPVAETLQYLAKHNWSGDVVVEVNTRLVAKKSKRTAMLKESLDFARKHLGLNE AT >gi|294971534|gb|ADNU01000037.1| GENE 89 94777 - 95592 876 271 aa, chain + ## HITS:1 COG:PA0393 KEGG:ns NR:ns ## COG: PA0393 COG0345 # Protein_GI_number: 15595590 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Pseudomonas aeruginosa # 2 268 5 270 273 149 40.0 5e-36 MRIAFVGTGSMGSALLEGVQASTDAQIVATCASAASATRLHERLGIDTLAVETTSDANLQ AVAGAQFVFVGVKPWMLAQTLKEIAPHLEPQTVVVSMAAGFSLEQMATHVPNNPVVRIMP NTPSQVGRGVIALSAGQKVSDEHVQALTELLSGAGQVFPLEEEQIGAMTAISGSGVAYFF LLAEALAKTGVELGLDEETANRMVAQTALGAGLLLDRTPEPAELRKAVTSKGGTTHAAIE TFRAHNFDDIVFKAGSAAVERGKEMESENAE >gi|294971534|gb|ADNU01000037.1| GENE 90 95589 - 96893 1254 434 aa, chain + ## HITS:1 COG:PH1142 KEGG:ns NR:ns ## COG: PH1142 COG3463 # Protein_GI_number: 14590970 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 21 235 21 246 453 73 28.0 6e-13 MSKGTKAQHLGVAGAVCVLGFALYSTLSIMMWRGFISPSWDLGIFTQLADQYAHFRAPVV NIKGDGYNLLGDHFHPILILLGPIFRIFPSGLTLLIIQSALFAVSAWPLTRLALERFGLT GGSLLGASYILSWGFINAVWSQFHEIAFAVPLIAFGLVWWMRGKRIHAAVAIGLLVFVKE DLGLMVLMFGLAVLLKDRKDWQWATGFATWGILWFVLTVRVILPALNPQGQYDYTDNVSV AETLTQSVDTKFAVVSVLVLAAGVIGLKSPFMLLMLPTLAWRFVGNVEYYWGFDFHYSAV LIPIAAASMIDVAPRRFFKLAPAVAFVAACAMLAQSQINLLWKYDQYASPSAQSAIEAAS EYDTVATDIYLLAYTVPHTNTYWYGTVGDVQPDAVLFNTAKTDYSPESWAQSKYGGVWTV VFDDGTYKVAARQE >gi|294971534|gb|ADNU01000037.1| GENE 91 96931 - 97605 548 224 aa, chain - ## HITS:1 COG:BH0597 KEGG:ns NR:ns ## COG: BH0597 COG0569 # Protein_GI_number: 15613160 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Bacillus halodurans # 14 220 7 213 218 152 40.0 4e-37 MAKQDSRDNSSVLVIGLGRFGASTASNLMKLGRQVMAVERNPEVVSEWMGKLTHVVEADS TNIEALRQVGAQDFNTAVVGIGTSIEASVLTTANLVDLGVEQIWAKAISLAHGKILKRIG AEHVLYPESEAGARVAHLVSSRMLDFIEFDDGQFAVVKMRPPKEVQDFTLAESDIRQKYG VTVVGVKGPGRDFTYAEPSSRIGPHDVLIVAGHVELLARFADRP >gi|294971534|gb|ADNU01000037.1| GENE 92 97598 - 99007 945 469 aa, chain - ## HITS:1 COG:DR1668 KEGG:ns NR:ns ## COG: DR1668 COG0168 # Protein_GI_number: 15806671 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Deinococcus radiodurans # 19 468 56 510 512 241 37.0 2e-63 MLSFVSSPKRTFFEVVFSPGRRTRDFIDRVAETSPARLAIVSFVAVVALFTVLLLLPISH QNPNDISFARSLLVSVSAVCVTGLSPVDFQDYWTGFGLVTITLAVQLGGLGILTLASVLG MVVSKGLGVRQRLIAMQATNAGSLGQVGSLLRAVVITALAVESVIFTMLFPRFLMRGEEV GTALWYSIFYSVSSFNNAGFSIHPGGIAYYADDPWILFTLMLSVFVGSLGFPVILVVTIL WNKPRSWDLHTKLTLTTSAILVVVGFFLFFGLEYNNPDTLGNKGFGATFWETLFMSVMTR SGGFNTIDMALLSPASHLVTDVLMFIGGGSSSTAGGVKVTTLAVLVLAAWAEARGYDDVT AFGRRIGHNVVRVAISVVFAGLSLVLVGTIALLHVTHNSLDMVLFEVISAFGTVGLSVGV TSTAPDSGLYILSALMLLGRLGTITLAAAVSSRSTKRLFRYPEERPIIG >gi|294971534|gb|ADNU01000037.1| GENE 93 99113 - 100237 878 374 aa, chain + ## HITS:1 COG:BS_acuC KEGG:ns NR:ns ## COG: BS_acuC COG0123 # Protein_GI_number: 16080023 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Bacillus subtilis # 2 315 21 332 387 249 43.0 8e-66 MHPLRLDLTAKLATDLGIFDHPRVHLGAIPQVDDDALKKLHSADFIEAVKDAGRTSELSK ETIEAYGVGTEDVPRFDGIHEASGRLYMGSIAAAQAVINGSYVRAVNFCGGMHHAMPGKA AGFCVYNDVAAAVQEFLDNGYERVVYIDLDAHHGDGVEHFFWDDPRVLTISLHENGRFLF PGTGFAADIGGLQAAASAMNIALPPRTSDADWLRALDATVPHVLREFKPQVIVSQHGCDG HRLDPLTHLRLSVDAMRRGAEWVRDLADELCDGKWVATGGGGYAIIDVVPRAWSQIVAIS AGVDIDPGTEIPQRWRDYVMTLTGREAPIRMTDGGTNDFQPWTYGYDPEADIDRAVMATR KAIFPFYGLDPYYD >gi|294971534|gb|ADNU01000037.1| GENE 94 100359 - 100457 75 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSVIKKRRKRMSKKKHRKLLRKTRHQRRNKK >gi|294971534|gb|ADNU01000037.1| GENE 95 100552 - 100818 223 88 aa, chain + ## HITS:1 COG:no KEGG:Intca_0656 NR:ns ## KEGG: Intca_0656 # Name: not_defined # Def: glutaredoxin 2 # Organism: I.calvum # Pathway: not_defined # 1 79 11 83 88 67 46.0 1e-10 MTFVDRVGCHLCDEAKETVTHVIDSVAQETGYMWTLNVVDVDSDSELLELYDWEVPVVLI NGRQHSFHRVDERRLKASLIRATRTNTH >gi|294971534|gb|ADNU01000037.1| GENE 96 100903 - 103368 2254 821 aa, chain + ## HITS:1 COG:MT0530 KEGG:ns NR:ns ## COG: MT0530 COG0373 # Protein_GI_number: 15839902 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Mycobacterium tuberculosis CDC1551 # 1 466 28 490 495 231 34.0 4e-60 MSLLVLGVSHRTAPMSVLDAFAFDATAVEQLRSRVCSGEYVMGVVVLATCNRVEIIAEVS GFHGGLADLGSALVDMTSFDWKELAGHMFVRYGKEAYEHLFELTTGLDSMAIGEAQILGQ VRTALNEARTAGTLTGDLERAVSRALEVGKRAHSETALDTVSNSLLDTALFSAREHLGEI TGARALVVGAGAMSGLAVATLVRSGVSSLTVINRTSERALRLIEHAEELAQELGTDLTTS FTELSEDTLVDEIRRSNLIVSVTGARGIVIGTDTVVKAMSSTPEPHKRAFIDLAMPFDIE HGVADIPHVSLMGLEQLSTEFAQSNLAADSRAVDALAQVRALIRQAMHQVAAEKAASKIN PTVVALRKRASQIIESEYSRLVNKLGDDVSDDVQAEIRKSLNRTVDKILHNPTVRVKELA LTETSTDYAAALSTLFDLTAAPETSELPIVDAKNRTAKSNPAKTAKTATPAPAKSTTTDG TTPVGDHTLDVVEPEGWTRTVRLGTRRSNLARSQSVGVAQDIAAHTGWRVEIVEVVTEGD VNMTPLANMGGTGVFVSAVRQALLSGKIDIAVHSLKDLPTAQAPGITLAAVPPRVDPSDV LVARDGLTFDTLPQGAVVGTGSPRRAAQMRAARPDLDIRGVRGNVDTRIKYVTDGRLDAV VLAAAGMRRLGRLAEVSQTLTTELMLPAPGQGALAIECRAENADREPFDAKLRSGLLAIH DETTYRAVVAERAILSRAQAGCSAPIGALANVTERSIELSAVMADDAGKLARITRSVANT GVNAAIDVGTQIADELLDTLGVVPDTLTGANAPKAQLEVKP >gi|294971534|gb|ADNU01000037.1| GENE 97 103365 - 104960 947 531 aa, chain + ## HITS:1 COG:Rv0511_2 KEGG:ns NR:ns ## COG: Rv0511_2 COG1587 # Protein_GI_number: 15607652 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Mycobacterium tuberculosis H37Rv # 250 529 1 275 275 288 56.0 3e-77 MSASTVFPLIPQKPLVVFMGTGPGDPGLLPVRSADILASAQVVVYDPDFHTDIVDTYAPS QTTRVEESSLGQTPSTRGRKMGELAKEHGLVVRLYAGDGVLFSALNSEGVAVRRTGTGIE VVPGVGLSAAVASFTGTPITTNRVRSLRFVEAGEMTHTDVSKHRNTAHVLTGDSENTVAA IRSLLNDGWDPATRVLSVVRVSRVRQVSVDTTLGALEQRLESQPVPHEMIVTILGAGIED RGPLSWFETKPLFGWNVLIPRTREQGEITAQVLHEYGAESEVVPTIAIQPPRTPGQMERA MRGLVDGDYQWVGFTSINAVRAVRVLLGDLGLDVRSLAGVRVAAVGAQTAAALREWGIEP ELVATSEESARGLAADWPVFDDVEGFNRVLLPRADIATEVLVNGLQEKGWKVDDVTAYRT VRAAPPPAPTREAIKRGDFDAVLFTSSSTVRNLVGIAGKPPATTVVACIGPATAQTAESH GLVVDIVSQEANVKSLIEDLADYARDLRDRAEAQGEPALRPSERRRTRRKS >gi|294971534|gb|ADNU01000037.1| GENE 98 104960 - 105931 858 323 aa, chain + ## HITS:1 COG:Cgl0426 KEGG:ns NR:ns ## COG: Cgl0426 COG0113 # Protein_GI_number: 19551676 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Corynebacterium glutamicum # 3 319 14 336 339 356 58.0 4e-98 MYRPRRLRSTPAVRRLVQENRLHAADLIETLFVKESLTEPVPLTSMPGVVQHTLDSLVDA SRKAVDAGVGGIMLFGIPSHRDETGSQAIAEDGVLNRAIRAVVEAVGEQTVVMADLCLDE FTSHGHCGVLTDTGEVDNDATVELYAQMAVAQARAGVHVIGLSGMMDGQVARVREALDEA GFTNTIILAYAAKYASAFYGPFREAVDSQLKGDRRTYQQNPANGREALTEVALDVDEGAD IVMVKPGMPYLDVLAQVSESVTVPVWAYQVSGEYAMIEFAASAGAIDRDAAIMESLTAFK RAGADAILTYWATEVASRLNGRS >gi|294971534|gb|ADNU01000037.1| GENE 99 105928 - 106422 302 164 aa, chain + ## HITS:1 COG:Cgl1145 KEGG:ns NR:ns ## COG: Cgl1145 COG1846 # Protein_GI_number: 19552395 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 16 149 5 138 162 84 35.0 8e-17 MTAEHSVEPADDKSVRWLDESEQRAWRHMVESWRLLMAVLDKDLRVDFGIGIPEYEVLVR LSESEDWSCRMSELAFEIGMSRSRLTHIVARMEKRGLVERASAAGDGRGVSCYMTEAGWA LLHEAAPTHVTGVRENFVDVLHPVEIKALGEIYEKVHSHLRELA >gi|294971534|gb|ADNU01000037.1| GENE 100 106441 - 107769 1155 442 aa, chain + ## HITS:1 COG:ML2414 KEGG:ns NR:ns ## COG: ML2414 COG0001 # Protein_GI_number: 15828300 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Mycobacterium leprae # 6 431 16 432 446 461 59.0 1e-129 MSRVTSESERLFARARAVIPGGVNSPVRAFKAVGGTPRFIRSAKGALLYDADGNEYVDLI GSWGPMILGHSHPQVLEAVHAAADQGFSFGTPSENEVALAEEIVARMDPVEQVRLVSSGT EATMSAIRLARGFTGRSRVVKFAGCYHGHVDALLVAAGSGVATFGLPDTPGVVAGEASET LVVPYNDAQALTEVFEKYGDSIACVITEACPGNMGIVPPRDGFTQLIRKLTRDHGALMIS DEVMTGFRVSEAGWYGYESAVGDGYPDGPADLFTFGKVMGGGFPTAAFGGRADVMAHLAP AGPVYQAGTLSGNPVATAAGLATLKLTKELDVYSHIESVADQLRAAVTQELTQAGVPHTV QSANSMFSVFFTDRPVVNYADAQSQNSDAYAAFFHAMLDQGVHLPPSAYEVWFLSLAHTP EVVDRIVSALPVAARAAAQAKG >gi|294971534|gb|ADNU01000037.1| GENE 101 107772 - 108431 506 219 aa, chain + ## HITS:1 COG:Rv0525 KEGG:ns NR:ns ## COG: Rv0525 COG0406 # Protein_GI_number: 15607665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium tuberculosis H37Rv # 4 203 6 196 202 141 46.0 1e-33 MIIRVHLNRHGEVHNPEGILYGRLPGFGLSEVGHQMAQRVAEHYTGSDFVVRDLVRSPLL RTKETIAPLAQALDIEPVVDERVIEAENQFEGTKVDRHSLMQPQNLQRLYNPLKPSWGEP YVNQVRRMRAAVASVHRRLEDIARSENLNEVDGVIVSHQLPIWVTRLDAEERPLVHDPRH RECALASSTTLTFENGSLVDVGYIDIAEDLQPAKGVAGA >gi|294971534|gb|ADNU01000037.1| GENE 102 108428 - 109015 444 195 aa, chain + ## HITS:1 COG:RSc0333 KEGG:ns NR:ns ## COG: RSc0333 COG0526 # Protein_GI_number: 17545052 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Ralstonia solanacearum # 64 194 81 210 213 76 33.0 3e-14 MTVNRRKALTAVLATAALVATSACSTKSDSLAEQAGSGQGYVSGSGVVTQIPEAERGEPV NFDFTLLDGKQGSVKDYQPKLVVVNLWYAACPPCRKEAPALNEAATKFADDVEFLGVNVR DGKAAAEGFTKTFDVKYANALDTDGSIVAALSEVLPPQATPSTVILDQEGRPAARVVGAV EESTLRGLIEETLGN >gi|294971534|gb|ADNU01000037.1| GENE 103 109015 - 109564 347 183 aa, chain + ## HITS:1 COG:Cgl0435 KEGG:ns NR:ns ## COG: Cgl0435 COG0785 # Protein_GI_number: 19551685 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Corynebacterium glutamicum # 8 175 9 184 268 119 44.0 4e-27 MPVSLLASAGQSFADTVLNGPILLAMAVALLAGLVSFLSPCILPLVPGYVGYVTGLSGTH VKDKKTWTVLAGVGLFFLGFATVFVAIGILFSGLGVLVSQWIDIVTRIFGVIVVILGIAF LGGFQRLQNDVRISKRPRAGLLGAPLLGATFALGWTPCIGPTLAAVLAMSTSFGGTGNVA RGA Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:31:37 2011 Seq name: gi|294971530|gb|ADNU01000038.1| Brevibacterium mcbrellneri ATCC 49030 contig00042, whole genome shotgun sequence Length of sequence - 3339 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 137 85 ## gi|295395617|ref|ZP_06805810.1| transcriptional regulator AraC family protein + Term 158 - 207 0.3 2 2 Op 1 . + CDS 304 - 2250 940 ## Xcel_0849 TrwC relaxase 3 2 Op 2 . + CDS 1874 - 3338 1070 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member Predicted protein(s) >gi|294971530|gb|ADNU01000038.1| GENE 1 3 - 137 85 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395617|ref|ZP_06805810.1| ## NR: gi|295395617|ref|ZP_06805810.1| transcriptional regulator AraC family protein [Brevibacterium mcbrellneri ATCC 49030] transcriptional regulator AraC family protein [Brevibacterium mcbrellneri ATCC 49030] # 1 44 1 44 44 63 100.0 4e-09 ETSDATLTRIATACGFDTVDTPTRAFRRALNVTPAEYRARFRIH >gi|294971530|gb|ADNU01000038.1| GENE 2 304 - 2250 940 648 aa, chain + ## HITS:1 COG:no KEGG:Xcel_0849 NR:ns ## KEGG: Xcel_0849 # Name: not_defined # Def: TrwC relaxase # Organism: X.cellulosilytica # Pathway: not_defined # 1 538 1 530 1175 404 46.0 1e-110 MVMTIRVISSRRGYEYLMKSVATGDTARESGTPLTRYYTETGCPPGTWLGSGLDSLDTGH GPALADGDTVTEEQLEKLLGQGVHPLTGAKLGSRFPRLRSPAERIAARIDQLDPALDATR RQNAIDEIRAEEIALKPKTAVVGFDLTFSPMKSLSALWGVADAATQELIVQAHHAAMRDT LALLEQRVSATRVGKGGIARMPITGVIATAFDHYDSRAGDPQLHTHLVVSNKVQGVDGRW RTLDSRTLHRATVALSASYNAFLTDHTAALVGVNWVEVYRGKDRNVGWEIDGVPAGLIAE FSRRTTGGAGEGIATATQWLIEEYVAKHGHAPSKTTITRLRQQATLETRPEKELHSFAEL TADWRNRATTLLGENATTWARKLRARGLAEAPLQASDLTPKQLGEITDVVMREVADRRAT WTRWHVHAEAMRQLMPLRFTTTAERTRVLNQIVEHAEAASVRLTPAYGRAVPEEYVQTDG SNRFQGVDQVMMTSQDILDAEARLLTHGRAKNGPRLPDRLVKRHVARKVQGVRLAADQAG GDHRDRDVRAQPRCARRAGRCREDCGAAWPAPGLDRPSREGLGDRSRAVSDRGRSPRRID RDTGGERAEVPLRTRQRPMGPAGRAVGDRRRGPPRWHPDPRPPRHACR >gi|294971530|gb|ADNU01000038.1| GENE 3 1874 - 3338 1070 488 aa, chain + ## HITS:1 COG:mll5729 KEGG:ns NR:ns ## COG: mll5729 COG0507 # Protein_GI_number: 13474766 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 24 421 364 737 1015 119 32.0 9e-27 MSPGRSRAYASLRIRRGVITAIATSGRSLDVLVGPAGAGKTVALRGLHRAWTARHGKDSV IGLAPSATAAEVLGESIGIQAENVPKFLYEHDKGRWDLRAGQLVIVDEAPLAGTLTLDRL ATHAAEVGAKIVLVGDWAQLSSVETGGAFGMLVRAPRRAPELHTVRRFVHEWEKAASRDL RHGKYAVLDTYEDERRLHDGDLEAMLDAVYTAWQHDREQGVSTLMLAGNAEMVAELNQRA HADLIAAGLVHETGAALHDGTTAGVGDLVVTRRNERRLATGKSWVKNGDRWHVTAHRKDG ALVVRRLGEGDTPRGRRLVLPAKYVREHLELGYASTVHRVQGSTVDTAHTLVDPDTASRE LLYVGLTRGMHENHAYIIQPDPHEVEPHLDPPEELTRVEQLARVLARSDADLSATETRQV EADKHASIATLLDEYDLLAREAQTERWEALLDIAPFATGEIADEVFTSPYYEYLEAALAR HEATGHDV Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:32:18 2011 Seq name: gi|294971436|gb|ADNU01000039.1| Brevibacterium mcbrellneri ATCC 49030 contig00043, whole genome shotgun sequence Length of sequence - 91380 bp Number of predicted genes - 97, with homology - 90 Number of transcription units - 46, operones - 22 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 2 - 74 86.3 # Lys TTT 0 0 - Term 190 - 222 1.6 1 1 Tu 1 . - CDS 232 - 654 429 ## cur_0043 hypothetical protein 2 2 Op 1 . - CDS 763 - 1905 734 ## Bfae_02110 hypothetical protein 3 2 Op 2 . - CDS 1911 - 2870 761 ## Lxx13700 hypothetical protein - Prom 2935 - 2994 1.8 + Prom 2980 - 3039 1.6 4 3 Tu 1 . + CDS 3063 - 3611 445 ## KRH_19020 hypothetical protein 5 4 Tu 1 . - CDS 3761 - 4132 275 ## Celf_0279 glyoxalase/bleomycin resistance protein/dioxygenase 6 5 Tu 1 . + CDS 4190 - 4651 182 ## COG1846 Transcriptional regulators 7 6 Op 1 . + CDS 4910 - 5530 691 ## Xcel_0299 hypothetical protein 8 6 Op 2 . + CDS 5583 - 6581 792 ## COG0306 Phosphate/sulphate permeases 9 7 Tu 1 . - CDS 6583 - 7212 408 ## COG1284 Uncharacterized conserved protein 10 8 Op 1 17/0.000 + CDS 7322 - 8125 503 ## COG0247 Fe-S oxidoreductase 11 8 Op 2 13/0.000 + CDS 8122 - 9627 1337 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 12 8 Op 3 . + CDS 9624 - 10274 554 ## COG1556 Uncharacterized conserved protein + Term 10340 - 10390 2.3 + Prom 10284 - 10343 4.0 13 9 Op 1 31/0.000 + CDS 10417 - 11241 1030 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 14 9 Op 2 34/0.000 + CDS 11338 - 12132 1052 ## COG0765 ABC-type amino acid transport system, permease component 15 9 Op 3 . + CDS 12129 - 12989 544 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 13006 - 13058 19.1 16 10 Op 1 . + CDS 13100 - 13900 912 ## COG0730 Predicted permeases 17 10 Op 2 . + CDS 13983 - 15617 1726 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 18 10 Op 3 . + CDS 15711 - 16943 1133 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Term 16845 - 16894 0.2 19 11 Tu 1 . - CDS 16940 - 18292 1021 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Prom 18258 - 18317 2.5 20 12 Tu 1 . + CDS 18408 - 19061 506 ## COG1739 Uncharacterized conserved protein + Term 19305 - 19343 1.7 21 13 Tu 1 . - CDS 19102 - 19602 469 ## COG2606 Uncharacterized conserved protein - Prom 19688 - 19747 2.0 22 14 Tu 1 . + CDS 19498 - 19734 121 ## + Term 19852 - 19881 -0.2 23 15 Tu 1 . - CDS 19774 - 20124 432 ## COG3824 Uncharacterized protein conserved in bacteria - Prom 20204 - 20263 2.2 24 16 Tu 1 . + CDS 20042 - 20248 70 ## + Term 20451 - 20518 12.4 + TRNA 20321 - 20393 63.4 # Glu TTC 0 0 + TRNA 20421 - 20494 87.3 # Asp GTC 0 0 + TRNA 20555 - 20630 71.4 # Phe GAA 0 0 + Prom 20557 - 20616 79.2 25 17 Op 1 . + CDS 20763 - 22454 1513 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 26 17 Op 2 . + CDS 22552 - 22974 548 ## COG0662 Mannose-6-phosphate isomerase 27 17 Op 3 . + CDS 23060 - 24454 1444 ## Noca_0259 hypothetical protein + Prom 24500 - 24559 3.2 28 18 Tu 1 . + CDS 24620 - 26347 1739 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 26497 - 26529 -1.0 - Term 26337 - 26390 2.6 29 19 Op 1 . - CDS 26407 - 27261 941 ## COG2951 Membrane-bound lytic murein transglycosylase B 30 19 Op 2 . - CDS 27261 - 29690 1932 ## gi|295395648|ref|ZP_06805840.1| conserved hypothetical protein - Prom 29728 - 29787 2.2 - Term 29738 - 29783 -0.9 31 20 Op 1 5/0.000 - CDS 29851 - 30267 210 ## COG3564 Uncharacterized protein conserved in bacteria 32 20 Op 2 . - CDS 30267 - 31790 1615 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 31835 - 31894 2.8 33 21 Op 1 . - CDS 31935 - 32456 497 ## gi|295395651|ref|ZP_06805843.1| hypothetical protein HMPREF0183_1341 34 21 Op 2 . - CDS 32545 - 33192 674 ## SCO4549 type IV peptidase 35 21 Op 3 . - CDS 33189 - 33599 438 ## gi|295395653|ref|ZP_06805845.1| conserved hypothetical protein 36 21 Op 4 . - CDS 33599 - 34831 1140 ## gi|295395654|ref|ZP_06805846.1| conserved hypothetical protein 37 21 Op 5 . - CDS 34871 - 35227 390 ## SGR_2511 hypothetical protein 38 21 Op 6 . - CDS 35235 - 37043 821 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 39 21 Op 7 . - CDS 37068 - 37613 452 ## jk1357 putative secreted protein 40 21 Op 8 . - CDS 37618 - 39441 1113 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 39685 - 39744 2.0 41 22 Op 1 . + CDS 39652 - 40413 193 ## gi|295395659|ref|ZP_06805851.1| conserved hypothetical protein 42 22 Op 2 . + CDS 40410 - 41189 654 ## SCAB_33831 hypothetical protein 43 22 Op 3 . + CDS 41192 - 42745 1018 ## COG4963 Flp pilus assembly protein, ATPase CpaE 44 22 Op 4 . + CDS 42747 - 43139 250 ## gi|295395662|ref|ZP_06805854.1| conserved hypothetical protein 45 22 Op 5 8/0.000 + CDS 43144 - 44505 759 ## COG4962 Flp pilus assembly protein, ATPase CpaF 46 22 Op 6 9/0.000 + CDS 44505 - 45431 728 ## COG4965 Flp pilus assembly protein TadB 47 22 Op 7 . + CDS 45428 - 46321 388 ## COG2064 Flp pilus assembly protein TadC 48 23 Op 1 19/0.000 + CDS 46422 - 47510 591 ## COG4585 Signal transduction histidine kinase 49 23 Op 2 . + CDS 47503 - 48174 463 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 47935 - 47980 1.2 50 24 Tu 1 . - CDS 48164 - 48337 139 ## 51 25 Op 1 . + CDS 48261 - 48563 407 ## gi|295395668|ref|ZP_06805860.1| conserved hypothetical protein 52 25 Op 2 . + CDS 48592 - 49257 489 ## gi|295395669|ref|ZP_06805861.1| hypothetical protein HMPREF0183_1359 + Term 49289 - 49326 9.4 - Term 49280 - 49311 4.8 53 26 Op 1 . - CDS 49335 - 49619 89 ## gi|295395670|ref|ZP_06805862.1| hypothetical protein HMPREF0183_1360 54 26 Op 2 . - CDS 49638 - 50453 582 ## SAV_4131 hypothetical protein - Prom 50698 - 50757 1.6 + Prom 50518 - 50577 2.7 55 27 Tu 1 . + CDS 50652 - 50882 249 ## gi|295395672|ref|ZP_06805864.1| conserved hypothetical protein + Term 50896 - 50946 20.5 56 28 Op 1 13/0.000 - CDS 50986 - 52074 693 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 57 28 Op 2 . - CDS 52087 - 53550 1307 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 58 28 Op 3 . - CDS 53555 - 53968 455 ## Arth_3734 hypothetical protein - Prom 53989 - 54048 2.4 59 29 Op 1 . - CDS 54057 - 55499 1077 ## COG1012 NAD-dependent aldehyde dehydrogenases 60 29 Op 2 . - CDS 55545 - 55907 280 ## Asphe3_33290 hypothetical protein 61 29 Op 3 . - CDS 55904 - 56944 582 ## COG4448 L-asparaginase II - Prom 57014 - 57073 1.9 62 30 Tu 1 . + CDS 57015 - 59270 1637 ## COG0151 Phosphoribosylamine-glycine ligase + Term 59337 - 59389 17.4 63 31 Op 1 . - CDS 59296 - 59766 390 ## gi|295395680|ref|ZP_06805872.1| conserved hypothetical protein 64 31 Op 2 . - CDS 59778 - 60173 367 ## gi|295395681|ref|ZP_06805873.1| membrane protein 65 31 Op 3 . - CDS 60179 - 60772 524 ## gi|295395682|ref|ZP_06805874.1| hypothetical protein HMPREF0183_1372 66 31 Op 4 . - CDS 60795 - 62381 840 ## gi|295395683|ref|ZP_06805875.1| conserved hypothetical protein - Prom 62416 - 62475 2.2 67 32 Op 1 . + CDS 62326 - 62556 65 ## 68 32 Op 2 . + CDS 62604 - 63323 469 ## SCO2835 membrane protein 69 32 Op 3 . + CDS 63400 - 64380 746 ## COG5585 NAD+--asparagine ADP-ribosyltransferase + Term 64395 - 64445 19.1 - Term 64381 - 64433 14.1 70 33 Tu 1 . - CDS 64462 - 64989 384 ## EUBREC_3326 hypothetical protein + Prom 65029 - 65088 1.6 71 34 Op 1 23/0.000 + CDS 65134 - 65391 280 ## COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 72 34 Op 2 . + CDS 65388 - 66146 638 ## COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 73 34 Op 3 . + CDS 66211 - 67374 1119 ## RMDY18_03860 putative hydrolase + Term 67389 - 67437 9.7 74 35 Tu 1 . - CDS 67624 - 67755 153 ## + Prom 67700 - 67759 2.0 75 36 Tu 1 . + CDS 67864 - 68091 81 ## 76 37 Tu 1 . - CDS 68109 - 69017 942 ## COG1054 Predicted sulfurtransferase 77 38 Tu 1 . + CDS 69439 - 69717 219 ## jk1357 putative secreted protein 78 39 Op 1 . + CDS 69818 - 70384 441 ## jk1357 putative secreted protein 79 39 Op 2 . + CDS 70387 - 71178 735 ## Smal_1417 hypothetical protein 80 40 Tu 1 . + CDS 71301 - 73613 2250 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 81 41 Op 1 . - CDS 73654 - 74304 483 ## gi|295395698|ref|ZP_06805890.1| hypothetical protein HMPREF0183_1388 82 41 Op 2 . - CDS 74304 - 76508 2220 ## COG1770 Protease II 83 41 Op 3 . - CDS 76588 - 77217 591 ## Gbro_1087 thioesterase superfamily protein 84 41 Op 4 . - CDS 77305 - 78591 1315 ## COG0104 Adenylosuccinate synthase 85 41 Op 5 . - CDS 78651 - 79112 460 ## Arth_0519 hypothetical protein 86 41 Op 6 . - CDS 79122 - 79943 661 ## gi|295395703|ref|ZP_06805895.1| hypothetical protein HMPREF0183_1393 87 41 Op 7 4/0.000 - CDS 80001 - 81077 633 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 88 41 Op 8 26/0.000 - CDS 81106 - 81897 1006 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 89 41 Op 9 . - CDS 81881 - 82729 887 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 90 41 Op 10 . - CDS 82788 - 84035 896 ## Mnod_0328 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - Prom 84118 - 84177 2.9 + Prom 84077 - 84136 6.4 91 42 Op 1 . + CDS 84192 - 85751 732 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 92 42 Op 2 . + CDS 85759 - 85935 135 ## + Term 86106 - 86152 3.3 - Term 85860 - 85891 -0.7 93 43 Tu 1 . - CDS 85924 - 86946 1320 ## COG0191 Fructose/tagatose bisphosphate aldolase + Prom 86937 - 86996 1.5 94 44 Tu 1 . + CDS 87111 - 88541 1247 ## COG2270 Permeases of the major facilitator superfamily 95 45 Tu 1 . - CDS 88566 - 88793 172 ## gi|295395711|ref|ZP_06805903.1| hypothetical protein HMPREF0183_1401 + Prom 88815 - 88874 2.0 96 46 Op 1 12/0.000 + CDS 88948 - 90132 1324 ## COG1960 Acyl-CoA dehydrogenases 97 46 Op 2 . + CDS 90203 - 91354 1505 ## COG1960 Acyl-CoA dehydrogenases Predicted protein(s) >gi|294971436|gb|ADNU01000039.1| GENE 1 232 - 654 429 140 aa, chain - ## HITS:1 COG:no KEGG:cur_0043 NR:ns ## KEGG: cur_0043 # Name: not_defined # Def: hypothetical protein # Organism: C.urealyticum # Pathway: not_defined # 2 139 6 154 160 110 47.0 2e-23 MRKLYYAALTYLILGLASGVFYREYTKIVGFEQGQYTQLSTLHTHLLMLGFFAMLIVLLL DKAFDLSSTRSFSAFFWTYNAGMAVTITMMVVHGIMAVGGSSSNGMTAGIAGLGHILLTF GLVSLMMSLGGRVKEVTARK >gi|294971436|gb|ADNU01000039.1| GENE 2 763 - 1905 734 380 aa, chain - ## HITS:1 COG:no KEGG:Bfae_02110 NR:ns ## KEGG: Bfae_02110 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 1 377 1 381 384 247 42.0 6e-64 MVDKPLVRARLVAQGMCPVPGGRSSFESPEAVAAELGALQGQDLPGALSSVALRVMQAGS GVEASVALERTREAFARGRLVRGYPMRGTVFVTSAEDLWWMTDLCAGPAVKQARKNSPRL GIDDEHFSVARDVLERLCVGREGATRAQVFEAWATAGVPTEGGCAYHLLKHFLSTMVVTY GPLTEGGPVENRVVLSRECLPQSSQLAVAFNDDRQAATAELLRRYVLLRGPVTLRDFQWW TKLPLTLIRAAARDIESSVEEWGTDESGEALVCAPGLPEVVAQVGRVTDRPQLLPPFDEL ILGYPDRTYIVPAEHHSTLVPGNNGVFRSAVVAGSQVVGYWRRKGQKGKRSLVLEPFKVM SEARENKARVLFEQFPHATA >gi|294971436|gb|ADNU01000039.1| GENE 3 1911 - 2870 761 319 aa, chain - ## HITS:1 COG:no KEGG:Lxx13700 NR:ns ## KEGG: Lxx13700 # Name: not_defined # Def: hypothetical protein # Organism: L.xyli # Pathway: not_defined # 31 249 28 245 360 182 44.0 1e-44 MANSRVTHGAGKLADKLVQKDGTVNPMAAKAISKLLSVQRPIVLAYVRSVRRRHPHATPA QMADILADHYKNLVTGGGAATGATAVIPGLGTGAALGVAAIETGAFLEGSALYAQSIAEI HNLPVEDPARANALIMGLMLGNDGKDMVKKVAAQAQGEDVPRRDAAWGAMITKQIPTQMV DMLTKQMRKAMFKRYARRSAGSLIGRILPFGIGAVVGAAVNRKMAKIVIENAQHAFGPAP AVFEPELEPKVSTQKRDTDIMGGLKQLLKATKKKRRGGNDDVIEGEVVERSASSGSSSFD GEPQVRDDTPRTYRPDVRL >gi|294971436|gb|ADNU01000039.1| GENE 4 3063 - 3611 445 182 aa, chain + ## HITS:1 COG:no KEGG:KRH_19020 NR:ns ## KEGG: KRH_19020 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 5 181 18 205 206 120 46.0 3e-26 MRPDLDGYSEAPGPAQKAEAAHDLAHLLIHDPSVPRDQAATDRFIALEQEFGLETLAELW SSAPAVSLPGALYRLYALHSWITRQPDEASGWFSAGRLSSPAEVVAGVADPPGPREVESM AREILSGAFRGDFAHACDRAAAFVFVAARGRATEDGPGLAEFHRMGEDLRAAARLYREGG LA >gi|294971436|gb|ADNU01000039.1| GENE 5 3761 - 4132 275 123 aa, chain - ## HITS:1 COG:no KEGG:Celf_0279 NR:ns ## KEGG: Celf_0279 # Name: not_defined # Def: glyoxalase/bleomycin resistance protein/dioxygenase # Organism: C.fimi # Pathway: not_defined # 2 122 3 123 124 135 57.0 4e-31 MTAVGPDFVALQVRDLEKSAQFYEKRIGLQRAPHHPDDAIVFNTHPIPFAVRKPLPGVDL DATAPHPGTGVALWIYVPDSQQLFDELEGCGVRVETTLNETPFGKAFSLRDPDGYLLTIH DKQ >gi|294971436|gb|ADNU01000039.1| GENE 6 4190 - 4651 182 153 aa, chain + ## HITS:1 COG:MT2955 KEGG:ns NR:ns ## COG: MT2955 COG1846 # Protein_GI_number: 15842429 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 15 123 10 117 139 61 38.0 6e-10 MKQPQIEESLTLSPGYKLKELTTLLRAAMEESLREYKITVAQFACLELLGRHSHLSNSEL ARGAFVSRQAMNKVLKGLEEKELVSRPQQAESGRVRRVQLTQRGADLLAQTREGIFHVEK AMVHGLSIEERAQLSELIARCSGNLQKSLNPHS >gi|294971436|gb|ADNU01000039.1| GENE 7 4910 - 5530 691 206 aa, chain + ## HITS:1 COG:no KEGG:Xcel_0299 NR:ns ## KEGG: Xcel_0299 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 1 206 1 206 206 68 29.0 1e-10 MSLRRLSNDDAIYELLHKIAVTVRDGNLVLAELSGIPVGKRREALSRIHEITQAADDHAG AIKRQLRENYLTRFDRRLIYRLSEAMRDVVHRQDAVGFAMTSSAFDELPVGVLEMLALLS NQADNTLRMTQRLRAKPDQWEYVDTIETLHLRAVTLQQQVTDVVPGARMGLTFLAAATSL GAAFIRASDGYQSVAAVVAEIALDES >gi|294971436|gb|ADNU01000039.1| GENE 8 5583 - 6581 792 332 aa, chain + ## HITS:1 COG:Cgl0455 KEGG:ns NR:ns ## COG: Cgl0455 COG0306 # Protein_GI_number: 19551705 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Corynebacterium glutamicum # 6 323 44 368 461 132 32.0 1e-30 MELATLCVLLLGLAFAFFNGFHDAGITVGNIVATHGLSPRVALTLATGFNFVGALLGQGI ATVVATEVASFPHSSNQLLAVLGGGIAGALLVNVVTYFMAVPIASTHVLMGGLVGAWLVV GWEDRPSIMFDETIISIFIMPFVAFFASIVLTRVVFRVVASYPPKPLFKRCRQVNSVMVA GLSLAHGSQDAQKIGAVMGLVWVSGVHPGAEVVMDGRPWTLIVLTAVALAAGTWFSGWRV ARTVSVSMVRLDPVTSVISNTTSAVFLSLAAFVFRLPASMSFVVVASNLGTARRRQDIRL RPLMKVVAAWILGIPATSCVAALFTLPLLMLT >gi|294971436|gb|ADNU01000039.1| GENE 9 6583 - 7212 408 209 aa, chain - ## HITS:1 COG:BMEI1312 KEGG:ns NR:ns ## COG: BMEI1312 COG1284 # Protein_GI_number: 17987595 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 16 208 22 215 217 144 41.0 2e-34 MAESAVQKEAEKLNLKHSWAEDLMGLITGCFVASLGLFFLKTAGAVTGGTAGLSLLVSYL VPLPVAWLFPLVNVPFFILAIWKKGWSFTIRTILCVVAVGVLTDFHLLMMNVHVHPVYGV ICGNLLAGVGLLILFRHKASLGGVNILALIVQERAGISAGYFQMSFDVLIVLASLFVTPW YIVLLSAGGAVILNLVLAFNHRPGRYMGY >gi|294971436|gb|ADNU01000039.1| GENE 10 7322 - 8125 503 267 aa, chain + ## HITS:1 COG:DR1907 KEGG:ns NR:ns ## COG: DR1907 COG0247 # Protein_GI_number: 15806907 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Deinococcus radiodurans # 1 255 1 242 247 228 46.0 6e-60 MRIALFATCIVDAMYPEVARDTVEILERLGHTVTFPQGQACCGQMHINSGKFDQAAPVVR NHVNAFEDANFDYAVAPSGSCVASLSHQHGMIAQHIGDHDLEERAAQVASRTFELAQFLT DVAKIDNAAEQLGSYFPHTVAYHPSCHGMRLLRLGDRQKKLLETVEGTTVISPAHEDTCC GFGGTFSVKNPQVSSAMLSDKVDALINTGADVCTGGDASCLMHIGGGLSRTRELKPQDTH IPPTVHLARILASTKERPLTLTGGSVR >gi|294971436|gb|ADNU01000039.1| GENE 11 8122 - 9627 1337 501 aa, chain + ## HITS:1 COG:DR1908 KEGG:ns NR:ns ## COG: DR1908 COG1139 # Protein_GI_number: 15807655 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Deinococcus radiodurans # 25 370 5 343 347 410 60.0 1e-114 MTTFLGIPRRRTTNPRLARAVPGTGNIVEETPFPTLAEHEMNNVQLRSNLSKATTTIRTK RAQRVAEMPHWEDLRTTGHDVKAYVMEHLPELLVQFEEAVKQRGGHVHWAADAGEANAIV EKLAREHAPVLPSGRREVIKVKSMATQEIGLNEHLEARGIDAIETDLAELIVQLGNDRPS HILVPAIHRNRNEIRDIFIRGMESADESLTSDPTDLTRAARVHLRKKFLSTKVAVSGANF GIAETGTLSIIESEGNGRMCVTLPETLISVMGIEKILPRFSDLGTFMQLLPRSSTGERMN PYSSLWTGVTEGDGPQNFHVVLLDNGRTRALADEHGRQALHCIRCSACMNVCPVYERTGG HAYGSVYPGPIGAILSPLLTGVEEGENGSLPYASSLCGACYDACPVKINIPEMLVRLRAQ DSEKNSSPSQLNAALKVASWVMSDGRRMSAAESALPLAALLGRDGFKSLPGIAGKWTHTR TIPAPPRESFRSWWRKNRGDA >gi|294971436|gb|ADNU01000039.1| GENE 12 9624 - 10274 554 216 aa, chain + ## HITS:1 COG:DR1909 KEGG:ns NR:ns ## COG: DR1909 COG1556 # Protein_GI_number: 15806908 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 29 214 27 211 212 120 40.0 2e-27 MSRDLILNRIYDALGRSPQVAPPASPTLPPAVPTDPLKAQTTSALVDLLTDRLVDYNATV THATSDTVGKEVAELLGDAHSVVIPHDLPSDWTAASQAQFHVDSADEPLSVDQLDTVDAV VTGSTVSIADTGTICLAGATTGRRAITLVPDHHVVVVRLSDVVESVPQAVETLIERELDT AVQTWVSGPSATVDIELERVKGVHGPRTLNVVLLED >gi|294971436|gb|ADNU01000039.1| GENE 13 10417 - 11241 1030 274 aa, chain + ## HITS:1 COG:AF0231 KEGG:ns NR:ns ## COG: AF0231 COG0834 # Protein_GI_number: 11497847 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Archaeoglobus fulgidus # 31 257 29 263 264 114 35.0 2e-25 MKRFFSTIAVVASSALALAACSGGGGGGTTESGVDLVKDGKLTLCSDIPYEPFEYVNDQN ETVGFDIDLSKKLAERLGVELDVKTTPFEGIQSGSSLDTGQCDIALSGMAITDERKSKMD FSMMYLKDNLALMAAKDSGYKSIDDVKDKKVGAQAATTGEKYAKEKGISPTQFETGGLLT QAMQTRKIDAAIANVSTIYAATQADDSLTLVQDFETGEVVGAAVKKGNSKLLDEFNGMLE GMFEDGSYDKLVDEWFGPVADAARVDQEEAKASK >gi|294971436|gb|ADNU01000039.1| GENE 14 11338 - 12132 1052 264 aa, chain + ## HITS:1 COG:AGpA9_1 KEGG:ns NR:ns ## COG: AGpA9_1 COG0765 # Protein_GI_number: 16119238 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 35 247 6 219 226 132 39.0 9e-31 MALTMQQRAKMSLGIQYGILVVVVLALAIFIDWGNIVDKFFNPKIIAQQFPLVITTALKN TIIYTALGFVFAMLLGNILALMKISSVAPYRWIATAYIEFFRGVPALLVFIAFGFGIPAA FSINLNTYVTVMLALGIVESAYIAETLRAGLQAVPKGQYEAARSLGMSHSRAMFTIVVPQ AMRIILPPLTNEIIIMTKDSSLIYLLGLSAVQFELALFGKNAIAAPSAGLTPLVVAGACY LVITLPLGWLARKFESRQAKERKA >gi|294971436|gb|ADNU01000039.1| GENE 15 12129 - 12989 544 286 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 40 277 2 242 245 214 46 2e-54 MTPADSTAPNTSGNNASHNPDNSGSTVATDVADTKHVKGVKITDLHKSYGNVEVLKGINL EVKPGEVVCLIGPSGSGKSTLLRCINVLETSNSGTIEVAGFVATDPETDLNKMRRHVGMV FQGFNLFPQMTALENCVVGQVKVLKRDQAKAKEVAMRNLKHVRLDHLADRHPDQLSGGQQ QRVAIARSLSMDPDLILFDEPTSALDPETVGGVLRVMRELAAAGMTMVVVTHEMEFAREV ADKVVFMDGGVVVEQGPPSEVLSNPQHERTKSFLARVSDHGEIDTD >gi|294971436|gb|ADNU01000039.1| GENE 16 13100 - 13900 912 266 aa, chain + ## HITS:1 COG:SA0080 KEGG:ns NR:ns ## COG: SA0080 COG0730 # Protein_GI_number: 15925788 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Staphylococcus aureus N315 # 12 251 7 250 251 71 25.0 1e-12 MVDSTAPRLSPISLLLIGAFTGLMSGLFGVGGGFIIVPLLLLLGMKQKLAAGTSVTAILP TAIVGAIGYMTLGQVDWLAAILLATGMIVGTQVGGRLLQILPESVLFWMFLVALLLIIPS LFLVVPSRDAHIDITVVVGILLVITGVIVGILSALLGVGGGIVMVPVLVLLFGANDLVAK GTSLLMMIPGSISATTVNYRNKNVDLKAAAIVGITASVVSPLGIWLAEFITPKQSNYAFS LLLIFTAVQLIARRYPHWVRFGKKEK >gi|294971436|gb|ADNU01000039.1| GENE 17 13983 - 15617 1726 544 aa, chain + ## HITS:1 COG:FN0649 KEGG:ns NR:ns ## COG: FN0649 COG1574 # Protein_GI_number: 19703984 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Fusobacterium nucleatum # 3 537 2 535 542 199 27.0 9e-51 MKLDALITNASVKTLDPRHPQATTVGIYDGKIVGLDDEVAGLDAHETIDAQGVCVTPGFN DVHCHTTWYGLTLASLDVEKLGSMDELYAQVEQAAKNTPEGEWINATGFAQQDYNDEYPS LEVLDRITHGRPLFMRKVSGHAAIANTRALEMAGILDPDFRVPAGGKVVRDADGNPTGLV EETAQSLIQDLIRPYSQDAIVEALDLATAQYAKEGITSFGEAGIAAGWIGHSPVEVTAYM RARREGKLRARAQLMPMIEALHTIKAHPADNYGVGLDLGVVTGFGDDWINIGPTKVFMDG AMSGETAALTKNYHGKDHPGYLQEDPEVLRQQILTAYQSGWSLAVHAIGDLACNEATRFI TEAVDRFGAPASGIPNRIEHAGMVADELIPTLAKYNIAVTPQAAFADAIGDSMNVSLGDE RVRLLYRAKSFLDAGVRVPGTSDRPCADGNVMRGIQAFVDRRTRSGGVFGSADECITPQQ ALEAYTSVAAEASGHGAIKGTVTPGKLADLVFLEADPTAVDPTTIAQIPVRATMVGGKFT HREL >gi|294971436|gb|ADNU01000039.1| GENE 18 15711 - 16943 1133 410 aa, chain + ## HITS:1 COG:mll1631 KEGG:ns NR:ns ## COG: mll1631 COG0624 # Protein_GI_number: 13471608 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mesorhizobium loti # 7 393 17 404 416 214 34.0 4e-55 MDQQFLDDFDTMSSFGQTPAGGVDREAMTGPDVEQRNWLGAWMRERGFTVTTDRIGNQFG LVEWTPGAPYVLVGSHMDSQPLGGKFDGAYGVLAGAHAVWRIQQEVEKSGRIPKFNLGVV NWFNEEGSRFQPSMMGSSVFTGKMDADTALKVTDSAGVSVHEALEAGGYLGSGEGPTPAA YAEIHIEQGRILDEEGINIGLVDATWAAQKYHFIVHGEQAHTGSTVIADRQDALLGAAHL VVTAREIADEFGIHTSVGQLNVLPNSPVVVPREVRLHMDMRSPDSDLVKRADEKLHQKIT QIEGLAHVKIEKDTAHSWDLLPYDERGVELARGVAEEMGLSHRNIMTVAGHDSTNMKDTV PTVMLFVPSVDGISHNEGEYTKPEDMVAGVTMLTGVLDKLIEGALGTPSL >gi|294971436|gb|ADNU01000039.1| GENE 19 16940 - 18292 1021 450 aa, chain - ## HITS:1 COG:Cgl2387 KEGG:ns NR:ns ## COG: Cgl2387 COG0160 # Protein_GI_number: 19553637 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Corynebacterium glutamicum # 12 439 22 438 456 404 47.0 1e-112 MNFNDEELTALKEESARAYELDRAHVFHSWSAQQTLTPMVISRAAGSRVWDGEGNSFLDF SSQLVNTNIGHQHPAVVQAIKDQADLLTTINPAHVNAARSEAARLIAELLPESLNHVFFT NGGADANEHAIRMARLHTGKHKVLSRYRSYHGGTNLAINVTGDPRRVPNDAPAQGVVHFF GPFRYRSEFHAQTEEEETQRALQHLRRTIELEGPSTIAAIILESIPGTAGIMLPSVEYMQ GVRALCDEFDIMYIADEVMAGFGRAGEWFAFNRYDITPDLVTFAKGVNSGYVPLGGVAMS DDIYATFGERPYPGGLTYSGHPLACAAAVATINAMRDEQMLEHARTMGEEVVRPRLEKIM ANSAHVGDVRGTGMFWAIELVKDQETREPLAPYGGSSPEMNQIVSGIKAGGVLPFVNFNR IHVVPPLNISEDELSQGLDVIEDVITNARF >gi|294971436|gb|ADNU01000039.1| GENE 20 18408 - 19061 506 217 aa, chain + ## HITS:1 COG:BH3630 KEGG:ns NR:ns ## COG: BH3630 COG1739 # Protein_GI_number: 15616192 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 13 207 2 196 213 149 41.0 4e-36 MDFDADLLDGFPVTSYTTVKGDATAEIEIKKSRFIGRVAHIENEQAAREVIEQERSKHPK ARHWCTAFVLDPDARTQRCNDDGEPSGTAGIPMLDVLTGNQLTYVVAVVTRYFGGTLLGA GGLVRAYGAATSAALEGLTRVTRQLVVPVTVSLDYARAEVAKTKCEQHGWAVIDAQYAQA VTLTFGVAPAEVEEMAAVLADLSAGQAHAMAREPRYA >gi|294971436|gb|ADNU01000039.1| GENE 21 19102 - 19602 469 166 aa, chain - ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 12 166 2 159 159 136 44.0 2e-32 MSIASRSHTTATPALRVLNLAGVEYQVHEFEHDPHVRRYGTEAAQKLGVDSGRVFKTLII MVDGEPFSALVPVSGQLDLKLLAQATGGKKAQLAGIATSERRTGYPTGGISPFGQRNSCP VVIDHSANDHETIFVSAGKRGLEIEIRPADLIMITDARVDRIAALD >gi|294971436|gb|ADNU01000039.1| GENE 22 19498 - 19734 121 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWVVFKFVHLVLNSSEVENPKCWSGGRVRSRCNRHVRWYASLLTGSNAKFVIKAIQATIN ERVGKEPIVKPGSRIFAG >gi|294971436|gb|ADNU01000039.1| GENE 23 19774 - 20124 432 116 aa, chain - ## HITS:1 COG:Rv3836 KEGG:ns NR:ns ## COG: Rv3836 COG3824 # Protein_GI_number: 15610972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis H37Rv # 3 115 4 115 137 112 49.0 2e-25 MEQISDEDFDALVEEALELMPEELKAHMDNVVIFVEDTSPEGEPPMLGVYDGIALTERGS DYGFVPPDTVTLFKEQLVDFALNEEDLLEQIYITIVHEIAHHYGIDDERLHELGWG >gi|294971436|gb|ADNU01000039.1| GENE 24 20042 - 20248 70 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCAFNSSGMSSSASSTSASKSSSLICSTLESYGICWFMWPVFLRNSYGKTPVLRGVFYIT LHSFCIPH >gi|294971436|gb|ADNU01000039.1| GENE 25 20763 - 22454 1513 563 aa, chain + ## HITS:1 COG:RSc2380 KEGG:ns NR:ns ## COG: RSc2380 COG2885 # Protein_GI_number: 17547099 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 263 384 91 206 209 72 39.0 3e-12 MRKLFAAIAVTLCAALSVSACTSKEAGSNSSGNNEQPAPGAPNPDATPGIQTIDGYKTDA RLGDGLAHIDLELPWSDGGPELMTKGRFQVLSLDRKGDNVRMVAAWLEPESGPFMGSRAL ASGMDALNYSPTTKLWDPQTNEIISPLQLNDESNRDKCHCSGIHSRSSDVPTTKERVELF WVDFPAPANKEVRVIPSEWSGPIDQPVTITDNQPFNNPAPDIATFADNEDPADEYGSPEA KRYIDKLQDKTESLLGSSTTTADATTALNITADVLFDFDKSEINDKGHKVLGNVAKTLNQ QAAGQTVKVVGHTDAKGDENYNKKLSEDRAKAVQKELQPQLNNVKLETEGRGETQPIAKN FDDKGNDLEANQAKNRRVSFEFKPTDTEDLQVDTGQHTKDVPKVKSTTPPDGALASAEFF LPESHDNPIRVDINKVAEKDGYVRLDYGFSVTGNTPNFSYFSGVPGNTEFQFGLNDFTGG LAPSSGYVSLIDSNNIMHFSPQAAGRGCLCTEATGTDRAGYSTPAPMYGYFPKKLLDEGK VTLRIGDSGKWDIDLKDLEARSK >gi|294971436|gb|ADNU01000039.1| GENE 26 22552 - 22974 548 140 aa, chain + ## HITS:1 COG:BS_yrkC KEGG:ns NR:ns ## COG: BS_yrkC COG0662 # Protein_GI_number: 16079709 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Bacillus subtilis # 4 136 53 185 186 171 56.0 4e-43 MAEIKDNGPHPYAVNIEEVTLENENFRTALWTGEEFQVTLMEIPVGGDVGLEVHTENDQF LRLEQGKGLAKMGPAKDNFTFEQEVSADWAVIVPKGVWHNIVNIGDEPMKLYSIYAPAHH PHGTVHKTQEEAEEAEAYEH >gi|294971436|gb|ADNU01000039.1| GENE 27 23060 - 24454 1444 464 aa, chain + ## HITS:1 COG:no KEGG:Noca_0259 NR:ns ## KEGG: Noca_0259 # Name: not_defined # Def: hypothetical protein # Organism: Nocardioides_JS614 # Pathway: not_defined # 15 463 11 454 454 458 66.0 1e-127 MFSATTNHPRRTTTVSTTDKLYSALVKREAEADMPEQARSQVASNGLKLIAANALQSSGD QTVNASTVLPWLFSALGVPPALAGLLVPIRESGSMLPQAALTPLVVKARYRKHVFVAGAL TQAASVAVMTGTAVFASGLVAGLIIIAALAVFSFGRCLCSIASKDVQGRTIPKGERGQIN GLATTVAGFVAITLGLAIRVWGGDDLTPQMLAWILGLGAVLWVGVAAVYIGIDEPSDTES SKSASAKSAPAKATQDAKASNWFNDTIDLLRTDKLFRHFFTVRSLLLVSSLSPPFIVMLS VQSGASGLTGLGGFVIASGLASLLGGRIFGRFADKSSKRLMSIGAGIASAIILATILIAS IPALTDQHTLISVAFVVAYFLITLMHTGVRVGRKTYVVDMAEGDKRTTYVAVSNSAMGLI LLIVGGVSSALATIHVFYALGFLAIMGLVGVFAGTSLPDVSRKK >gi|294971436|gb|ADNU01000039.1| GENE 28 24620 - 26347 1739 575 aa, chain + ## HITS:1 COG:MT2580 KEGG:ns NR:ns ## COG: MT2580 COG0318 # Protein_GI_number: 15842033 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium tuberculosis CDC1551 # 5 575 11 546 547 602 52.0 1e-172 MTSTQLSYSSGPSSAPLLGDTIDGHFQKLVASDPQAIALIDHPTGRTYTYEQLNEQANFL AYGLIERGIKKGDRVGIWAQNLPEWVIVMYACAKLGAILVNINPAYRAHELEYVVKQSGM SMLISQISAPPHSDFVAIAREVNTQVPGLQLVYIDTPNPNHNPETTSAPTPHTHTEHTRN PAELLSTLLTRGNELAQTSGAKMAQRLEAISHELNADDPVNLQYTSGTTGFPKGVTLTHH NLLNNGYFIGELLSYTPADRVCLPVPFFHCFGMVIGILAAYSHGSTAIIPNPGFNPQKTL ETVTAHKATSLYGVPTMFIAELELENFGDYDLGTLRTGVMAGSTCPVEVMNKVIDRMNMA EVAICYGMTETSPVSTMTRADDSIERRTQTVGRVMPHVEVKVADPVTGLPLPRGQKGELC TRGYSVMRGYWNEPDKTAEAIDDAGWMHTGDLAIMDEDGYLDISGRIKDMVIRGGENIYP REIEEFLYTHPAIRDVQVVGVPDSTYGEELLAWVILRDPTDTLTAEDVKAFAQGKLAHYK IPRYVEVRTEFPMTVSGKIRKVELRAEGAQLIEGK >gi|294971436|gb|ADNU01000039.1| GENE 29 26407 - 27261 941 284 aa, chain - ## HITS:1 COG:Cgl0948 KEGG:ns NR:ns ## COG: Cgl0948 COG2951 # Protein_GI_number: 19552198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Corynebacterium glutamicum # 63 257 38 248 254 142 40.0 6e-34 MGTGSKVFVAIAGLLALGLLVGSGVVITKLSLQPDSSQAAGSQTPDPAPLPTPDSLDGAG DDPTATPTADPAAVAKADLSLDWLDDTSEKTNIPRRVLQAYVGATLWGAREYPSCNLNWN TLAAIGAIESNHGRLGGASIKDDGNADKDILGPQLNGQGFKRINDTDKGRLDGDTEFDRA VGPMQFLPQTWQSMAKDGNGDGRTNPNNIDDATVTAVAYLCQSGNIGTSVGWDKAIRAYN DSDDYVQKVFATANNIARVTSPAPAPAPATVPANNNSNNNGQRR >gi|294971436|gb|ADNU01000039.1| GENE 30 27261 - 29690 1932 809 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395648|ref|ZP_06805840.1| ## NR: gi|295395648|ref|ZP_06805840.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 3 809 1 807 807 1359 100.0 0 MRMLRSPRVPGAIPAVAAAVLALVIMPGHFVEAAPTIVSNERSDTQPADSAKDRKLLDQP SLRVGEDGLTIEAPRGQDKVLPASDVIIGAEYGTFESVIRSHGLTPQDQPVSVSITGAKA VKPNGEKKSGARVDITSSATKHKVSTYSPTSSNPSRAFDVDHEYPLTWELTEVEDLAETP GIEPTPTTSATPEPTPTQSGQSTENASETPSQNATPGAEPTPDPEEPDVSVFCVAVTVSH VRETFQLGNSFPATAPTLTQKTSNLTIAVGKDWKEAAQSITVDCDAKNTPRPSEAGAQMT PLDPAGKADSTTKEPYYEVEKDTSDLGFSFSGDTPLQQFQFNLIDAPEGATAYYRNGTVN PHTKKPVKDEPKPGKKPAIESSEPKEWAGSLELRRNTVSKVRHRSNASRDLFATWKFSKP GVYCVGYGTRSLTKVGAPDEWTDFAGILKFAVGGADPATVDCKTSALDNNAGLRFPITTP YVKDEEPTPGPTGTPTNSATPKVTSTPTKATEATETPEPKDPAAVETRDDATDEATTEGA TEGASATPTADPKIKIVRAPSGVKLCPANVEDEQQLRSGNFVFHTADNIKVSNRKGTRSV PAGSTSVISQSATRTAQAGITDFVDPQGSYWATGGAGASAPSFEWNTSGSNDEVEISMRQ ISGTGDAIVFGPETDGAGLSDGDTGKFAAGESGALTFGFNKVGEYEIELKVGSKGYTMKF AVGDTTDTARSLVTSNILSTCAGSAVQQNLLQPSDDESEQTEAKPHDKNIDQAKGQLGDE WWTISIVGIVLAAILIGFIVMVVLNSRRY >gi|294971436|gb|ADNU01000039.1| GENE 31 29851 - 30267 210 138 aa, chain - ## HITS:1 COG:BH0680 KEGG:ns NR:ns ## COG: BH0680 COG3564 # Protein_GI_number: 15613243 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 23 135 4 107 118 127 54.0 5e-30 MSNAQAGAPVLEAPAPPGEYHSRVALTQEAVDLLVELAGVHGQLMFHQSGGCCDGSAPMC YPAGEFITGDSDVLLGVFTLPEVEEAAAQCEFWMSKAQFEYWKHTHITVDVVTGRGSGFS VESPTGKRFLIRSRLMES >gi|294971436|gb|ADNU01000039.1| GENE 32 30267 - 31790 1615 507 aa, chain - ## HITS:1 COG:BH0681 KEGG:ns NR:ns ## COG: BH0681 COG1012 # Protein_GI_number: 15613244 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Bacillus halodurans # 3 507 2 506 506 799 75.0 0 MTVYAQPGTDGAKVEFRSRYDNYIGGEWVPPKSGKYFENVTPVTGKVFCEAAQSNADDVE VALDAAHKAAPAWGKTSPAERAAILHAMADRIDENLEKIAVAETWDNGKPIRETLAADIP LAADHLRYFASAIRTQEGHLSQLDEDTVAYHFHEPLGVVGQIIPWNFPILMAIWKLAPAL AAGNAVVLKPAEQTPASIMVLMEIVGDLLPPGVVNVVNGFGVECGKPLASNPRIAKIAFT GETTTGRLIMQYASQNLIPITLELGGKSPNIFFEDVAQQKDDFYNKAVEGLAMFGLNQGE VCTCPSRALVQESIFDEFVEAGIERVKKFVQGNPLDTNTMVGAQASNDQLEKILSYLAIG KEEGAEVLIGGEQAHLDGDLAGGFYVQPTVFRGNNSMRIFQEEIFGPVLALTSFKDYDEA LSIANDTLYGLGSGVWSRNTNTAYRAGREIQAGRVWVNNYHTYPAHAAFGGYKNSGIGRE NHLMMLSHYQQTKNMLVSYSEQPTGLF >gi|294971436|gb|ADNU01000039.1| GENE 33 31935 - 32456 497 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395651|ref|ZP_06805843.1| ## NR: gi|295395651|ref|ZP_06805843.1| hypothetical protein HMPREF0183_1341 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1341 [Brevibacterium mcbrellneri ATCC 49030] # 1 173 1 173 173 347 100.0 1e-94 MFDSNFFPPGGPQYGSFLIMLAIPAVGILGMIMIIRMRKGTKQVFRTGALPGRITGATVT AKHVGTSDTMGKEPYLALHIEYFEDGRTHSITEPPAYNLTMVDKVRKQFVYHGRYDLGRN PKNGVAPLKISDPAKKDRAEKTIANGGSYEFTLEQPIPISVFKNGDQIDWQVA >gi|294971436|gb|ADNU01000039.1| GENE 34 32545 - 33192 674 215 aa, chain - ## HITS:1 COG:no KEGG:SCO4549 NR:ns ## KEGG: SCO4549 # Name: SCD16A.34c # Def: type IV peptidase # Organism: S.coelicolor # Pathway: not_defined # 63 213 106 256 259 94 42.0 3e-18 MSEHHDDLDSGESTQNPAEVEPADRGYRLLETWNPPRWVLVALFGAGGVLAVVTLVAYGW NHPSAYVAAVFVAVSPILTAIDFAERRLPDVVTLPAAGASVIALIVGGLASGDWGPALRG GAGMLILFAAFFVMFIVAGGAFGFGDVKLGLSMGAVLGTYSWFALLLGPFIGMLLGFAVG VVLMIMRKATMKTAIALGPYLIIGTLVIIVIGALG >gi|294971436|gb|ADNU01000039.1| GENE 35 33189 - 33599 438 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395653|ref|ZP_06805845.1| ## NR: gi|295395653|ref|ZP_06805845.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 136 1 136 136 205 100.0 1e-51 MFYAKGFYASLLMNAAVSVIAFVAAVILGPTLALNLGTGFTRLLFVALVLFWRFGLTRMT AERMWELDAPLRRILFNLVPAGMLGAVIPLIPFALIATLSSDSLALVELLIDALFVGAII TAASMVSKPQKEEVAQ >gi|294971436|gb|ADNU01000039.1| GENE 36 33599 - 34831 1140 410 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395654|ref|ZP_06805846.1| ## NR: gi|295395654|ref|ZP_06805846.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 98 410 1 313 313 575 100.0 1e-162 MKLKLSSTRQRNLKTKARDPRRLRKQRTVMLSVLTGLAIIATPIARPLGYSLADGLCSGE GCSTSVGQMPQCSGVGRDKAISSSLTSFSTTAPAKQPMHLAGVVNGAVKIATSSQHGGVD IYSFSDQEQAKRFVYDESTSLPRAIDAGVGPTTDGMYKGFTKLMGKLGLVSKESAEPWAE GARFTSGEISEGVISQNVRDQHTTQTLVTQLPADDTPSLNRLAATLGITGALRMDVRKAP DGSPYSLTFSGPASEAWNLSVIKASDFKRATVDTKVKTEGDSFIVRSYTLDLKQTTNREA YKALVDQKIVQGVKVDTLKTGLFDKDVAEGKAATNPYSAMRDRTRDTAVVTETTFATSAD LDVENLSEAFTKHALMHESTAGLEAREVNAADLALPHAQFEPFVSCETES >gi|294971436|gb|ADNU01000039.1| GENE 37 34871 - 35227 390 118 aa, chain - ## HITS:1 COG:no KEGG:SGR_2511 NR:ns ## KEGG: SGR_2511 # Name: not_defined # Def: hypothetical protein # Organism: S.griseus # Pathway: not_defined # 23 114 26 119 133 67 36.0 2e-10 MKDLNKKAREVCLTTPQGTHYTVQLAGTALRRLRGLFFSDAEALMIVPCSSVHSIGFNRP LEVAYIDKDGQVLTVKDLKPWTMHMPVRNAHAVLEANPGLLEQWGIHQGVRIILAEET >gi|294971436|gb|ADNU01000039.1| GENE 38 35235 - 37043 821 602 aa, chain - ## HITS:1 COG:PA1119 KEGG:ns NR:ns ## COG: PA1119 COG2885 # Protein_GI_number: 15596316 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Pseudomonas aeruginosa # 282 401 51 162 168 75 40.0 4e-13 MKFVAFPSLSQARMGGMTVLAVVALVLSGCIPGIGRNGDGGGGGVQPPAPEMIESDGFWR PNTLGEPLAKKVVERPTDDGPAKARLEVVSLDSDGKSARMVAAWLPPVEGQYLAPDELLS QKGRSQLVPWTRLADFEAHEFIEPYQGTSKLADGSFKNPPRAKDLPATDKVTRNTDCVCS YGPEEIDDTSTAPKSLRLFYADFPAPEADEVSLFFGDNAAVLEGVTVSSGKKFDVPELVD FNFIKIGQDALPDVYGSGAVGQRRIPMDVNTESVTDASVSNRGDTSALNVSADVLFEFDS DKLNKDAQKTIDSVAEELKKSAKGQKVVVEGHTDDEGDEGYNQGLSERRAESVKKAVEPK LSGAGIQLETKGFGETKPIVPNRDGKGNPIKKNQAKNRRVSFSYTPQGQIDANVDAGKKI KDLPEMKSATSNGGITAGILPTPKGRSTPELNFDVKALEEQGDFLKLTVAISTASGQDDA SAFSQRDSKVETMPFGQNFTAEYPATPSLSNLALWDKTTNMMATTVTAGPGNCLCSQTMS PVDYAVARGEPIEMFAFFPKVSMESDELIIRVADTAQIKVNRTQSASAPNSSTPRPSPTA QG >gi|294971436|gb|ADNU01000039.1| GENE 39 37068 - 37613 452 181 aa, chain - ## HITS:1 COG:no KEGG:jk1357 NR:ns ## KEGG: jk1357 # Name: not_defined # Def: putative secreted protein # Organism: C.jeikeium # Pathway: not_defined # 6 181 17 205 212 71 27.0 1e-11 MNVLKRVIPLVTTVFLVSACGLGGGEGQPGDDNSNRSGASTITFELPDGVSEVPDYEPTD GWTKSFTDNPSDPKVVIRVSDDLGRTAEADSTLGVIQTEAMFGGPYGEDFSSEKVSKLEV KNADVGVEASFTTTQEEATVNGTWMFVSNRKSEKVAGVEIIGTGVSPAMVNGIRDSLEYT P >gi|294971436|gb|ADNU01000039.1| GENE 40 37618 - 39441 1113 607 aa, chain - ## HITS:1 COG:PA1041 KEGG:ns NR:ns ## COG: PA1041 COG2885 # Protein_GI_number: 15596238 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Pseudomonas aeruginosa # 290 405 99 208 210 80 41.0 8e-15 MKPLIIPAVRRPRLSVLATLILATVVLTGCIPGLGRGSDGGGGGQQPPAPKMIESDGFWR PNTLGEPLAKKVVERPTDDGPAKARLEVVSLDSGGTAARMVAAWLPPVEGKYLEGSELQT ELATVSDMPFIRLLDFKSHELLSSYEGEKLQYSDNFKNEPNPQPTGPDEFQRAYSNCTCS NIPKTEEYQGEKPESVPLFYADFPAPSSDSVGIAFGDNAAVFTDVKLSENQRYEAPKLTE IDYRWAHQEDLSNPYGGGAIYERRYPMSLVTESVMDTSVSDRGDSSALNVSADVLFDFDS DKVKDSDSKLIDGIANELKKSAAGQKVTIEGHTDDEGDEKYNVDLSNRRAESVKKVLEPK VKGSGISFETKGFGESQPILPNRTAGGDAIKKNQAKNRRVSFSYKPQGDIDPNVDTGKKI SDLKKMEPGDSTDSIASGIVPSPKDTDAPEMQLDIKEFEEYGEFLKVTFALRTASGQDVE RAFTQGANIEGKMAFGNNPVTHYRDTPTTIDMQLWDKSSNLLAHSVTAGPLDCLCSRSVR PTDKDKARGEAVEMFAFFPKKGITSDTLTLRVGGMSQMEFNRNGSTGQSDAPSSAPSQST SEPTSTP >gi|294971436|gb|ADNU01000039.1| GENE 41 39652 - 40413 193 253 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395659|ref|ZP_06805851.1| ## NR: gi|295395659|ref|ZP_06805851.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 253 1 253 253 492 100.0 1e-137 MTPSPTVLHTDTLEFDEVADRIKQCPDSSRSFFVVPIAQKKERIAQIFNARAVSMHNQVV VHVSQLSPLGITVLADMLHVAKESLSTAQLAAFATELETAITCSAYLRSVTKLQVSRTNM WHHVMSWLPPTRFVATAHAGVHFAKKFDQDAEYWEDNAHEVLFISDLREQQSTLNPQRIA ELAQASSVTTRNVHDAGFWGTKPVFEWVFAPTDLWAHVDNIRNRSTLCPWCSEPYVPPRC AVCSAPSLIGETQ >gi|294971436|gb|ADNU01000039.1| GENE 42 40410 - 41189 654 259 aa, chain + ## HITS:1 COG:no KEGG:SCAB_33831 NR:ns ## KEGG: SCAB_33831 # Name: not_defined # Def: hypothetical protein # Organism: S.scabiei # Pathway: not_defined # 1 244 1 232 238 126 31.0 8e-28 MNPKQRRGLLLMIAATLLAIMVFIAVVVYVQNVSSKVGPTTEVYVAKEDITAFQPIEQDM LETKTVPNRYITEDMVTSLEQVAGQKASVKISAGSFIQTDAIEPASSIEDGQREISITFV GDAGVSGRVSPGDKVDVVASFARARENDQGETAYKRADIPYNVSGIVVSNATVVSVGQPV DPNAVVGAADQSGAEAEAVAVTFAVSVEEAGRLSYAEAFAVSMRVMRIGNNETGTKVNES DKSFDDRDLQGTISGEGDK >gi|294971436|gb|ADNU01000039.1| GENE 43 41192 - 42745 1018 517 aa, chain + ## HITS:1 COG:RSp1086 KEGG:ns NR:ns ## COG: RSp1086 COG4963 # Protein_GI_number: 17549307 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaE # Organism: Ralstonia solanacearum # 63 360 85 368 439 68 25.0 3e-11 MTSAVLISSSEDRGTNIRASLGDAGLTIYRQYSSTSAFLAALPTMSDEVDLIVIDQDVEP INAWDLAREISMRFPALPTAVVLDSPTQADYARAMDANIRSVIAYPLEFEDVQRKVQSAL AWAKTVRTVVFDRTAEGSSPSKAGRMITLSGSKGGVGVSTIATHLAREAAKADPSKAIVL VDFDLLKADLSIVLNVPQSRTVTDILGVVEELSRQQIQDVLYTSPDGFSVFFGPKNGEES ELVTELVTRKIFGQLRSHFDLVIVDAGCHLNEANSAAIEMADDAYIVATSDVLSLRGSHR LAQLWKRLGIRPTDSSKVILNKVNKKQDLQPEAAKKVVGLPVIPQYIPESISAIELAMNH RDPSLVTPVWSARVKRLGAEMGILPEEQLSVAPPPAKPKKRKTRKRNRKERGQSTLEFAG IFVLFIFIALVGFQSVLLGMTWIYASGAANEGARAAAVNESAVSAAESHTPAAWRKNMSV TQSHDSVHVSIKTPTIVQMSERYALIINTSAGIVKED >gi|294971436|gb|ADNU01000039.1| GENE 44 42747 - 43139 250 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395662|ref|ZP_06805854.1| ## NR: gi|295395662|ref|ZP_06805854.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 130 1 130 130 199 100.0 4e-50 MVSRLIKRSRQQGAVSLEFVGMLFAFFIILVTALQAMLAVFSLSQANSAARNAARAEVLN PGSGVTAAQHAVSPGLRDAGVSTSCSGTRVHNGSITCKVTVAVPNLGTDSSLWLPTLKVS RSATQPITTE >gi|294971436|gb|ADNU01000039.1| GENE 45 43144 - 44505 759 453 aa, chain + ## HITS:1 COG:RSc0652 KEGG:ns NR:ns ## COG: RSc0652 COG4962 # Protein_GI_number: 17545371 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Ralstonia solanacearum # 41 439 43 442 453 354 47.0 2e-97 MSLLKRAEQQRQLRGTLGTDKDIDPRQSSFNEQVSFYRRLLLEEVDLEELSKLERTQRRV RLERILSHLLSQQGPVLSARERSQLIQRVVDESLGLGILEPLLADESITEIMVNGPNTIF VERAGRLEKLDLSFSNDEQLMQVIDRIVAEVNRRVDESSPMVDARLLTGERVNVIVPPLA MDGPTLTIRRFPKPFTLEDLQNKGSFDELTREFLMACVKARFNIVVSGGTGTGKTTMLNA LSGMIPDGDRIVTIEDSAELQLQQPHVIRLESRPPNVEGKGQVTIRDLVKNSLRMRPDRI IVGEVRGGETLDMLQAMNTGHDGSLVTVHANNPLDAVSRLETLASMSEVKVPFEALRDQI NSAVDLIVQLGRGADGSRRMTEVAAVTSESREEFELTTLMKFESEPLTADRVVRGRHVMR QIPDNIADRLWISGNGLSENFDISPTAACRGGH >gi|294971436|gb|ADNU01000039.1| GENE 46 44505 - 45431 728 308 aa, chain + ## HITS:1 COG:CC2941 KEGG:ns NR:ns ## COG: CC2941 COG4965 # Protein_GI_number: 16127171 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Caulobacter vibrioides # 2 308 1 325 325 88 22.0 2e-17 MMLGILLGTLAVLVLGSIGLVVFALGTGEQHDIVRAERSGGTVSFRSSRIFPADRIFRKT RFGDKLSQQLIQANLRSITSIEYLLIALLITAVVFIILNRYIAILYAFLLSALLLFGFWK VLDVLKERQRAKFFQQLPEFARIMANSTGAGLSIHTALGVAASELPDPASREFSALKREL EIGTPLDIALERMSERISGRDLDVLVSTLVIAQRSGGSLISSLRNMSDTLEFRKETKREV KTLVSQSSYTGYLVVAFGVGFVLLLASFNDGLLLKLTSTIIGQIAIVIATVCYAIGLVAI NRLVKVKL >gi|294971436|gb|ADNU01000039.1| GENE 47 45428 - 46321 388 297 aa, chain + ## HITS:1 COG:MTH980 KEGG:ns NR:ns ## COG: MTH980 COG2064 # Protein_GI_number: 15678998 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadC # Organism: Methanothermobacter thermautotrophicus # 97 289 46 239 313 77 30.0 4e-14 MIVGLLAGLLAASAVIILYLGFRAYRTDPLSSLSPEDRALIKDETRLKRRADGPVKRLGA RLGPSLGRLFGGKYPSWVESKIQLTDKKQYQDFTGFMAFKGSVFLLCAAGGVSIFLVTKA PLILFIFIAIGLLFPDFALIQSGRKRQEAIEDSLPDFLDVLAVTVSAGLSFRSAIAKVTE RTQGPLADELNTVLHQLNMGETVYDAFSALRKRTTSESLDSFITTLLQAEELGAPLADTL ATIALDMRQTTAQRARQKAAKASPKIAGVVTIIMVPGTMALIMVSVYFVAGLDELSF >gi|294971436|gb|ADNU01000039.1| GENE 48 46422 - 47510 591 362 aa, chain + ## HITS:1 COG:BS_yvqE KEGG:ns NR:ns ## COG: BS_yvqE COG4585 # Protein_GI_number: 16080362 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 137 359 114 351 360 100 29.0 5e-21 MVLLYPVLIAWGDSEYAFWETAGVVVLASVSLITFSFWDSVVTFAVKHPLAVSIDIFISV LVMARAGSSSSYFLYLGATALLIGLLVDGVNRVILTGLLIAGFLLITLTNGSPNHTSAQQ VVSDLISASIIVLFVILGARMRTLQAQVNTALQLATRNAREAALGEERSRIARELHDSTV KSLVGISLLSDTIRKQPDASARLAQAIKNAAESAVDESRQLLSNLRSGTSDNFEKLLRAG LDEIEVVHGISVELVINGCEVSTEHAHNVEKIIIEAVTNAALHSGTDRVRVAFTQSDTRM RVTVTDYGEGFRVRQKREGHIGLTSMRERATDIGGTLAISSTPGKGTVVLLDINQEQGEA YV >gi|294971436|gb|ADNU01000039.1| GENE 49 47503 - 48174 463 223 aa, chain + ## HITS:1 COG:BS_yfiK KEGG:ns NR:ns ## COG: BS_yfiK COG2197 # Protein_GI_number: 16077897 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 5 216 2 208 220 135 37.0 4e-32 MSKSIRVVIADDNGIVRMGLESLLAATDSVEVVASVEHGSLAVKAVEELKPDLCLLDVRM PVMNGIEATKEISKTCKVLMLTHSEDAENVTAAISNGASGYVVYSELNTDYIYQTMQSVL AGAMVVSPTASSALLSPTPHVEEHLDKNVSEPSSATVPSPTDQFGLSRRETEVMVLVADG LNNRQIAESFFLSEKTVKNHINRIFAKMNVTSRAEAVSIWLKR >gi|294971436|gb|ADNU01000039.1| GENE 50 48164 - 48337 139 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSSLFMMYLSRYVRVEGVPDVLSDMFNYSAYAGPVRGRTGPMSGPVIFWAHGPVIV >gi|294971436|gb|ADNU01000039.1| GENE 51 48261 - 48563 407 100 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395668|ref|ZP_06805860.1| ## NR: gi|295395668|ref|ZP_06805860.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 20 100 1 81 81 141 100.0 2e-32 MSDRTSGTPSTRTYLERYIMNKLELMAHKVDVNARAFAELAVEKLQERRENGQGTIEYLG IAVLISLLVAGLVGAFKTDIANALKENIVNVISNIFGNTQ >gi|294971436|gb|ADNU01000039.1| GENE 52 48592 - 49257 489 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395669|ref|ZP_06805861.1| ## NR: gi|295395669|ref|ZP_06805861.1| hypothetical protein HMPREF0183_1359 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1359 [Brevibacterium mcbrellneri ATCC 49030] # 1 221 1 221 221 350 100.0 4e-95 MKFRLKREDGQVSLAVLLLSVLVIAAAVGAFIFGEANDSRTRAQKAADASALAAARDVRE RFIPAFARAHIPPPPVAGPAVPANPTVVLSPLGEVGRHGAFTFAQKNESQLSRYVAQGNR FEANVQSNKREVGSPVGSRARKKISAPGDAVAKIKTENVHCYSTNIKRAPTKPFHVLSWS MVCSGNGHTARVNYFGATTTLSDIDSRKKEWRRVFDIKLDK >gi|294971436|gb|ADNU01000039.1| GENE 53 49335 - 49619 89 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395670|ref|ZP_06805862.1| ## NR: gi|295395670|ref|ZP_06805862.1| hypothetical protein HMPREF0183_1360 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1360 [Brevibacterium mcbrellneri ATCC 49030] # 1 94 1 94 94 115 100.0 1e-24 MNSPHIPPKPAAPPKPKEPPAAEADSDNPWLNPQQRRSSESGEPGKASKPKKAKRQRAKH KKTRERKPVNVPKLGWYLFAVTMLGAVFAALALG >gi|294971436|gb|ADNU01000039.1| GENE 54 49638 - 50453 582 271 aa, chain - ## HITS:1 COG:no KEGG:SAV_4131 NR:ns ## KEGG: SAV_4131 # Name: not_defined # Def: hypothetical protein # Organism: S.avermitilis # Pathway: not_defined # 7 261 12 271 281 87 30.0 4e-16 MPYQRDYLIHLRVFEPVEVYSHAHRGAIPHRAGLEDLVCADADRRLISMPPDPVPSRFRD APLVLSGEDAGDNRDRVCPVQDDVRGWQALDILMETTPRAELDAMVPKVARRRAHVRRVD WMNSEVDDRVFTRTSAWDVPPIWWLAVDPDTDTIVEEEQPDGAVRVRIRTEMLTASARTE WALDILRNKSQAEFFTESVSDFLEWLDSFDMGSILELDLGGMSDVQWPHTGAELVLDWLD ALDSDDMESARIAFDMFTEEWEMRSLFAHSS >gi|294971436|gb|ADNU01000039.1| GENE 55 50652 - 50882 249 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395672|ref|ZP_06805864.1| ## NR: gi|295395672|ref|ZP_06805864.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 76 1 76 76 91 100.0 2e-17 MGRGRAKAKQIKVARKLKYYSPETDLNALQRELGAGSVSSDNDYDEYDEDPDYAEYADKY AHYDEEEEDSEVNNWR >gi|294971436|gb|ADNU01000039.1| GENE 56 50986 - 52074 693 362 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 7 350 13 347 356 271 43 9e-72 MTQKQTTYATAGVDVEAGDRAVELMKSAVAATHNEHVFGQVGGFAGMFDVSFLKDYTRPL LATSTDGVGTKVAIAQALDIHHTIGYDLVGMVVDDIVVSGAKPLFMTDYIACGKVIPERI AGIVRGIAEACKEADVALVGGETAEHPGLLRPDEYDVAGAATGAIEADDLLGAHKVNAGD VIIGLPSSGIHSNGYSLVRRIIADAGWELSRDVADFGRTLGEELLEPTKVYTGELLSLYE RVPGAVHSVSHVTGGGLSANVARVLPAGTLAVMKRDTWDVPAVFNVLGDLGNVPRADRER TWNLGVGMVLVVDSARAAEVVAAYPGAWHLGEVVSDTGEYRENPDYVQGAKGVDGGAAVL ID >gi|294971436|gb|ADNU01000039.1| GENE 57 52087 - 53550 1307 487 aa, chain - ## HITS:1 COG:ML2206 KEGG:ns NR:ns ## COG: ML2206 COG0034 # Protein_GI_number: 15828184 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Mycobacterium leprae # 19 484 55 514 556 624 66.0 1e-179 MARADGLLTDQIDPTEKAQDECGVFGVFAPGEEVAKLVYFGLYALQHRGQESAGIAASNG SQILVYRDMGLVSQVFSESDLETLPGHLAVGHTRYSTTGSSTWANAQPTLGPTPFGTVAL AHNGNLTNFAELEALADDRRHMHQETVREATQKEKRTRQFRDSSNDTSLVTELLASTEGD NLTEAALELFPKLTGAFSLVFMEENRLYAARDPWGVRPLSLGRLEHGWVVASETAALDIV GASFVRDVEPGELIVIDEEGLRSHRFADPTPARCVFEYVYLSRPDSVLEGKTVHAARTEM GRELAREYPVEADLVIATPESGTPAAVGYAEESGIPYGQGLMKNAYVGRTFIQPTQTIRQ LGIRLKLNPLRENIEGKRLVVVDDSIVRGNTQRALVRMLREAGAKEIHIRISSPPVKWPC FYGIDFASRAELIANGLNTDEICQSLGADSLGYISMDGMIKATQQKPAELCTACFSGTYP IPLPDNI >gi|294971436|gb|ADNU01000039.1| GENE 58 53555 - 53968 455 137 aa, chain - ## HITS:1 COG:no KEGG:Arth_3734 NR:ns ## KEGG: Arth_3734 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 6 108 12 108 116 63 41.0 3e-09 MKDTVDVTVRRSPRYSVFVGLGVIVGFIIAGILAFLPVDTSTLTQEYSQAAMLGILMAFL GIVGGFLGALVALIIDRSSVKNAKTYTVNAKYEKVTEPQNTTDAPETSEVSDTSGPEDTD TGADTSGAKPGTPPVEQ >gi|294971436|gb|ADNU01000039.1| GENE 59 54057 - 55499 1077 480 aa, chain - ## HITS:1 COG:RSc2350 KEGG:ns NR:ns ## COG: RSc2350 COG1012 # Protein_GI_number: 17547069 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Ralstonia solanacearum # 7 479 2 476 478 401 48.0 1e-111 MGGMTHHTTSFIAGRHVPSINTYANIDPATGRELGEVGRSTADEVDQAVVAATRAQKEWK TSSPEQRAKLLVAVGRLIQENREKLARIESEDTGKPRTQAYADVDVCARYFEFYAHAIES YYGRTIPLGDGMHAYTRREPYGVTGHIVAWNYPLQLVGRAVATSLATGNCAVAKPADETP RSTVLLAELVAQAGFPVGAFNTVTGLGAEAGAALAAHPGVAHLGFVGSTQTGSLIAHAAA DRVVPTVLELGGKSANIVFPDADIDAAIPSLVRSIVQNAGQTCSAGSRLLVHRDVHDQVV DAMAKTMSTLTIGRGTDDPDLGPLISAKQLERVNGFLNRLEGGAVVCGGSAPEGLSDDVK GGAFFAPTIVDGVDPASEIAQDEVFGPVVAVMSFDSDEQALALANGTEYGLVSAVWTQNL SRAHHMVNNIDAGQVFVNTYGAGGGVELPFGGFKKSGYGREKSIEALDEYTQTKTVVMKV >gi|294971436|gb|ADNU01000039.1| GENE 60 55545 - 55907 280 120 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_33290 NR:ns ## KEGG: Asphe3_33290 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 4 118 5 125 125 135 63.0 7e-31 MSNRRRIKVEAGRRALNDWRATDAPDRTTLATAVRYSLEELATRAPGNTVEVRVPPFGVT QCIAGPTHTRGTPPNVVETDADTWLALVTGALTWAQAVDAARVSATGTRSDLGEHLPLWP >gi|294971436|gb|ADNU01000039.1| GENE 61 55904 - 56944 582 346 aa, chain - ## HITS:1 COG:AGc1525 KEGG:ns NR:ns ## COG: AGc1525 COG4448 # Protein_GI_number: 15888175 # Func_class: E Amino acid transport and metabolism # Function: L-asparaginase II # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 27 295 30 316 353 150 35.0 5e-36 MTTHSDSQQTSTPATLTLDRAAELAIVERSGFIESRHAGVAVVVDPDGAEVLSLGDPTAP VLTRSCLKPLQAIAVLEAGVALNGPELVLASASHRAEARHIEVVERMLREAGLTAADLQC PSVLPADPANRRRVGDNPSPVFFNCSGKHAAFMAAQVHAGEPTDAYLDPDSFIQQRVREA VTEYCGEAPAFTGVDGCGAPVHAVSLVGLARGVSKVTAGRTLSGKKLVQAVLDNPWAIEG QGRPNTVAIEQLGVFAKFGAEGVLVMGTREGYCVAVKALDGSGRATTFVALELLAHIGAL DARDVLNVLPHVTPAITGGTNPDGNTRTVGSISAGADLYAVLQRRA >gi|294971436|gb|ADNU01000039.1| GENE 62 57015 - 59270 1637 751 aa, chain + ## HITS:1 COG:MT0796 KEGG:ns NR:ns ## COG: MT0796 COG0151 # Protein_GI_number: 15840187 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Mycobacterium tuberculosis CDC1551 # 1 423 1 422 422 389 53.0 1e-107 MKVLVIGSGAREHALVAALSRDPMVHTVIAAPGNPGIDVMCETRPVDATNPQAVTSLAQE CDASLVVIGPEAPLVAGVSDALRDAGIAVFGPSQAAAALEGSKAFAKEIMDAAKVPTAAS VAATSAQEAREALTRFGAPHVVKADGLAAGKGVVVTRDFDQALNHAVACLEESDRVVIED FLDGPEVSLFVVCDGTTAAPLAPAQDFKRALDGDQGPNTGGMGAYSPLPWASDHLVDEIV EQVAQPVVDEMARRGTPFVGLLYCGLALTKNGIEVVEFNVRFGDPETQSVLSRLQTPLGA LLLAAAQGRLSEYSHLEWSTDASVTLVLAAAGYPASPRKGDPIAGLEEAGAVDGVMVLHA GTAVNDQGEVVTNGGRVLSVVANAPSLQEARELAYRAGDLITWEGKTYRNDIASAAVQGS IRVPVAAGSGEVESVAENDSEGAHAPRSTVAWWASQAPQVPGWTHVYSGKVRDLYIPVEA TNMDDADRLLMVASDRISAYDHVIPTPIPDKGKVLTGLTAWWFDQVTDLVGNHVLTVDVP AEVAGRGMIVKPLRMFPVECVARGHLTGSGLKDYQRTGAVCGNELPEGLGEASKLEPAIF TPATKAELGDHDENITFDQTVKLLGDSDAEALKSLTLALFERARSIAAERGIILADTKFE FGLDFTDQIVLGDEVLTPDSSRFWDAEGFVEGQSQPSFDKQFVRDWLTSEESGWDKDSGM APPQLPTQVVEATRARYIEAFEKLTGRKFPG >gi|294971436|gb|ADNU01000039.1| GENE 63 59296 - 59766 390 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395680|ref|ZP_06805872.1| ## NR: gi|295395680|ref|ZP_06805872.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 156 1 156 156 306 100.0 3e-82 MESILEWWKGALPVIAVIFIGWRLFGYRIRNLWDRKEWQEDGHIVAVDISVTNHARLKGD FAPLSTRVVAKLKSGEMIVDGWGQDTRWVPRNIRQQVFANGGRVINVFEPKINSTDPREQ QDAIRQMKENYYRYWLREPVPATVCKRKSGRYFFTP >gi|294971436|gb|ADNU01000039.1| GENE 64 59778 - 60173 367 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395681|ref|ZP_06805873.1| ## NR: gi|295395681|ref|ZP_06805873.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030] membrane protein [Brevibacterium mcbrellneri ATCC 49030] # 6 131 1 126 126 142 100.0 1e-32 MRSYLMPFLGGMVAYAVVNVVVTMLVTSNRSLLFFLCPFVAAIVVDLWHARLSPVFSVEH LSLVFVPTLVMGLTQIVIAIALGGALGALGYYLLALLLYLVVAGMGFAVSAMVRILVFGY GYDVEQEAPAY >gi|294971436|gb|ADNU01000039.1| GENE 65 60179 - 60772 524 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395682|ref|ZP_06805874.1| ## NR: gi|295395682|ref|ZP_06805874.1| hypothetical protein HMPREF0183_1372 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1372 [Brevibacterium mcbrellneri ATCC 49030] # 1 197 1 197 197 361 100.0 1e-98 MKKFGTFMVSIAAVSAMLLSMAGCGGEDPGLVGSSSKKADVLEISSGPLTVEVPKDWVKF DKASDPENIKDPWVVGARDSDTELTTQLRLTKNTGESPHVDATNQAVLYGNVLGNSAEIS PRGVDKVDVEGADEAQVAYFEVKDADGDYWDGLFMSAGNRETGNVSTMELISFRGEGISQ DDAKNIIANAKYDKSKE >gi|294971436|gb|ADNU01000039.1| GENE 66 60795 - 62381 840 528 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395683|ref|ZP_06805875.1| ## NR: gi|295395683|ref|ZP_06805875.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 528 1 528 528 859 100.0 0 MTWLRSRLFRKPQSGQGTIEYLGVAVLISLLIASLAVAPVAPKLGTAIKDTVCKVAQPVL GGSCNSSEEKERTPEDYMMECPVVTQTNRHGSKVDVLFFSLGSGVTMKVTEMSDGTAEVQ LIGDVNAGANFELGKLKAGDWVKLNAGVGVDITGSMGDAWTFDNVEDAKNFAKENQERVD SWTNNIPLLGTAINTSNAPKDPRKSTYAIDVSGWGEASAGINISNAKDKAKGGKDKNSNG DKSGNNSDDGASGNKSGNNSSDNKSGNNSDDGASDNESGDGWKSNGYDSSGKTDLNEVNN ALNLSKLDKYIPKGAVSVDGSKTGSMQVDRGENLDDPSDDKMTFTFDVKESGDASGKGLG FDGGGNVGYQSSFSVETDVNGNVTGLKIVQSVHGGGGMGDAKDDNTSKVFVADFDLSDPE SRKVVTDFMQNPGGIPNLEDLSKGKLIGSTPEQKAMAEYMQSPNVKLNEMTMKNTNESDG LSVGVKVLGVGAGYENSNTSSTAELQDAHTWVPDENGGRKRVKNTKCL >gi|294971436|gb|ADNU01000039.1| GENE 67 62326 - 62556 65 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVPCPDWGLRNRRDRNHVIVYSLGIRGLGSYCDSIGTSPQYLETVGLLLAKSGPHLPLVE KHSLGPSTHDSQRFIS >gi|294971436|gb|ADNU01000039.1| GENE 68 62604 - 63323 469 239 aa, chain + ## HITS:1 COG:no KEGG:SCO2835 NR:ns ## KEGG: SCO2835 # Name: SCE20.09c # Def: membrane protein # Organism: S.coelicolor # Pathway: not_defined # 96 239 109 247 353 107 47.0 4e-22 MNLNSHLDSAPSVAPERRESGAMSIEYLGIAVLTAVLIGGIMAFPYAKHLVPGTQASVCT VTTGDSRHDEDGECKNDNKTFIQKSQAQPIPDNAPGPDAAGTKDRQEIIKRANTWVERGV PYSQSAYTNDPNGKQYRTDCSGFVSMAWGLDQSLTTVTLPTVAHPISKDELQPGDILLKG GPGSGGNNGHVVIFNGWTDESRTSYHALEQVGGQGAISRTISYPYGADSSYVPYRKNGL >gi|294971436|gb|ADNU01000039.1| GENE 69 63400 - 64380 746 326 aa, chain + ## HITS:1 COG:CAC1640 KEGG:ns NR:ns ## COG: CAC1640 COG5585 # Protein_GI_number: 15894918 # Func_class: T Signal transduction mechanisms # Function: NAD+--asparagine ADP-ribosyltransferase # Organism: Clostridium acetobutylicum # 195 318 277 374 377 81 36.0 2e-15 MSTLRTRLKNLSQGGQGTIEYLGIGVLISVLIAALVTFPVGDAIGKGLRGVICQISHSAP SSGTLDGTNSRNASPAPTLAATVSTPNSIEILAGNCPLAHEKAEAKAEAKSAKGKSSDSK KSDKNSGKSANKDSGNSGSSKSDSKNDSKDSSKSGKKDSPVKGEPIDVSPQGFDGPFVQG KDGYVYDGDGNRVPYSNKKKRPEYGEGQVEAVWKQSRDQQLEDIKNGDLEVDQNGFVPTK LEKDEIYVIDVDGNWRSVKWKPGQSRGGKWDMGHREGHEYRKTYKDYMSGKISKDEFLKT YRNPKNYKVEDPKRNQSHVDEDKSDQ >gi|294971436|gb|ADNU01000039.1| GENE 70 64462 - 64989 384 175 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_3326 NR:ns ## KEGG: EUBREC_3326 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 7 129 6 132 169 63 28.0 3e-09 MASPLYVARNGTYEEFCEVFDTENNDATDMLMAALTNDDPDARFRISSDMLDKGADPCAV EEGQNTLSLLLGGNSHLGERDGELVKRLVDGGADVNFRESRGSLPLRLAIVIRVDDDEKR RPIYEALFGSEVLDLELPANENNPVNTIGKWLRMNVDGRPGKLDVLDEFLKAKGY >gi|294971436|gb|ADNU01000039.1| GENE 71 65134 - 65391 280 85 aa, chain + ## HITS:1 COG:Cgl2536 KEGG:ns NR:ns ## COG: Cgl2536 COG1828 # Protein_GI_number: 19553786 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component # Organism: Corynebacterium glutamicum # 1 77 1 77 81 70 60.0 8e-13 MGRVVVEVMPKPEILDPQGKAISQSLERSGVSGFDVRQGKRFELTIHEEITPEVLEQVKQ VAQDLLSNPVIEDVVGVYEVTGDAQ >gi|294971436|gb|ADNU01000039.1| GENE 72 65388 - 66146 638 252 aa, chain + ## HITS:1 COG:MT0813 KEGG:ns NR:ns ## COG: MT0813 COG0047 # Protein_GI_number: 15840204 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain # Organism: Mycobacterium tuberculosis CDC1551 # 23 246 4 218 224 258 63.0 1e-68 MTTDQLIGAPVSTTSAPEAQGLRVGVVTFPGSLDDRDAARAVALSGPEVVPLWHADTSLA EVDAVVLPGGFSYGDYLRCGAIAARSPIMGAIVDAAKGGMPVLGICNGFQILCESSLLPG ALVRNDHRQFICRDQKLRVENANTAWTNSYEQGQVITVPLKNGEGGYQADQRTLDELEAE GRVVFRYEGYNPNGSQRDIAGITNAQGNVVGLMPHPEHAVEAGFGSAVGSDMGAGVDGQG FFTSVIAHLARA >gi|294971436|gb|ADNU01000039.1| GENE 73 66211 - 67374 1119 387 aa, chain + ## HITS:1 COG:no KEGG:RMDY18_03860 NR:ns ## KEGG: RMDY18_03860 # Name: not_defined # Def: putative hydrolase # Organism: R.mucilaginosa # Pathway: not_defined # 6 226 4 222 445 91 28.0 7e-17 MKESPALTDLVVSGVFISTEAQWVFERTTANSEYDWNVDFSDAPLIALSGEHGFTGRPHM IGSTDSNYGSFRWGWSPDNDWKEPAIALSRKVREYGAEHQIPELTDPEFDTHDDQALRIV IAAKVITGHLFHVPLPVGPATAWLIVDAPQLQLGEPEIRPVVKALAAGLSVTDIRNHRTA IQEYGRLRGFHVVENGDGLRMLLKDGSADLTFDSLNRLTNCQVSQPLSDEAAEQLTAAGA AEPQLVRVEVEDAPPVEQSQAPTAEVAPQPEPSVTSGAEDSAEQVLPQTAAVEDETVGDV PVQEPAAEVVEEPAASVPTEPEVVEEPAVATAEPEPVAPREAEPAEQPAVKAEPAVKEEP AVQEEPAPEPEKPKKKKKGFFGRLFGR >gi|294971436|gb|ADNU01000039.1| GENE 74 67624 - 67755 153 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSMSFPIFLILAPGIVFGLAVIIVVAIVVIVTSNKKRNANPPQ >gi|294971436|gb|ADNU01000039.1| GENE 75 67864 - 68091 81 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELFATTLICAVKENGLVRPSVLPQLFDEPHPARVVWQVLHGVNLTFCELALVPRSEAAF KDCGHALRSSQELLA >gi|294971436|gb|ADNU01000039.1| GENE 76 68109 - 69017 942 302 aa, chain - ## HITS:1 COG:Cgl2936 KEGG:ns NR:ns ## COG: Cgl2936 COG1054 # Protein_GI_number: 19554186 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Corynebacterium glutamicum # 1 297 1 307 312 396 61.0 1e-110 MSVTKIVLFYVFTPLADPEAVKLWQLALAENCNLKGRVIISPDGINATLGGDIDDVKRYV RTTKSYAPFKKADIKWSNGQGNDFPRLSVKVRPELVTFTRPEEIKVTDKGVEGGGVHLKP GELHKLVEERGDDVVFFDGRNAMEAQIGKFKNAIVPDTETTRDFIAEIESGKYDDLKNKP VVTYCTGGIRCEVLSVLMKNRGFEEVYQLEGGIVRYGETYGNSGLWDGSLYVFDKRMHME FGDGAESLGTCVSCGTHTPIFVNCANLSCRKQFLRCEDCTERNEHPYCDDCVEAGLDTVA AQ >gi|294971436|gb|ADNU01000039.1| GENE 77 69439 - 69717 219 92 aa, chain + ## HITS:1 COG:no KEGG:jk1357 NR:ns ## KEGG: jk1357 # Name: not_defined # Def: putative secreted protein # Organism: C.jeikeium # Pathway: not_defined # 1 92 117 207 212 110 65.0 2e-23 MGYFEANAMFKSTHGPDFKLGNSKDLDIKNATQAKLTTWTTIDKSGRTVQGAWVFVSAEE DPAVAGVEIMALTLTKDEINNMVDSIQFDPTK >gi|294971436|gb|ADNU01000039.1| GENE 78 69818 - 70384 441 188 aa, chain + ## HITS:1 COG:no KEGG:jk1357 NR:ns ## KEGG: jk1357 # Name: not_defined # Def: putative secreted protein # Organism: C.jeikeium # Pathway: not_defined # 7 188 17 207 212 186 58.0 3e-46 MKTQVFKLLALSTIIALLSSCGIGGSSDTDEPAESHGQRVSEGRISVVIPKQWAKNPDFK PTLTGFTGSWANSLEEPTDIVRMSSDHEKGPTAEATMGYFETNAQFRSTYGREFKLGESK DLEIENATEAKLSTWTTNEKTGRTLRGAWVFVSTDGDSAVAGVEIMALELSDEDINAIID SIQFDPTK >gi|294971436|gb|ADNU01000039.1| GENE 79 70387 - 71178 735 263 aa, chain + ## HITS:1 COG:no KEGG:Smal_1417 NR:ns ## KEGG: Smal_1417 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 3 263 2 254 254 227 45.0 4e-58 MDSYFKRTGAHQYTATQLTSGAWNVEEQHISPTLGLATHIIETDLHARRDDDLVIGSLKF DILGVVPIGPYDFDVRVIRPGRTIELVEATLNHGERTIVIARAWLMKPGDSSSVAGTAFS QLPPREHMEPYSPQIDWQGDYLKTFEGFRTQHEPGRAQVWQRTHADLVDEPYSALARSAG MLDVANGLSVREDPAKVAFPNVDLDIHYFRVPDFSHQPGQPSDWQGYDVTVSFGDGGLGL THTWVHDQHGPFAAVTQCLTVRP >gi|294971436|gb|ADNU01000039.1| GENE 80 71301 - 73613 2250 770 aa, chain + ## HITS:1 COG:Rv0803 KEGG:ns NR:ns ## COG: Rv0803 COG0046 # Protein_GI_number: 15607943 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Mycobacterium tuberculosis H37Rv # 11 769 3 753 754 945 63.0 0 MASAADKRVKETVEYASAHPEVKQPYAELGLKENEYEEIKKILGRRPTSAELAMYSVMWS EHCSYKSSKVHLRKFGEQVTDEMKKNLLVGMGENAGVVDIGEGWAVTFKVESHNHPSYVE PYQGAATGVGGIVRDIISMGARPVAVMDQLRFGRIDHPDTARMVHGVVSGIGGYGNCLGL PNIGGETIFDPVYQGNPLVNALAVGVMKHEDIRLANASGTGNKVVLFGARTGGDGIGGAS ILASEPFDDTKPSKRPAVQVGDPFAEKVLIECCLELFHAQVVEGIQDLGAAGISCATSEL ASNGDGGMHIALDDVLLRDPTLTPEEILMSESQERMMAVVTPENLQRFEEIAQKWEVEYS VLGEVTDTGRLVIEWHGDVIVDVPPRSVAHDGPVYDRPYQEPSWTAEVRANTVRAAGLSY PTGGAELGNTVIEMAKSPNLCSRDWITKQYDKYVQGNTAMAFPDDAGVIRVNEETGLGVA LATDANGRYCFLDPARGAALALAEAHRNVATAGAQPLAVTDCLNFGSPEDPEIMWQFVQA VDGLAAACKDLGIPVTGGNVSLYNQTGSAAIHPTPVVGVLGVFDDVSRRTPSGFREAGQT IYLLGTTYDELDGSAWADVMHNHLGGVPPEYRPEQEKELAQILINASRDGMIDTAHDLSE GGLSQALVEACVRFGMGARVWLDEVCERDGIDLFTALFSESTARAIVAVPRSEEVRFKDM CTARGFAFARIGMTDAGPSNSASLELVDHFSLPLDELASAHGGTLPRLFD >gi|294971436|gb|ADNU01000039.1| GENE 81 73654 - 74304 483 216 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395698|ref|ZP_06805890.1| ## NR: gi|295395698|ref|ZP_06805890.1| hypothetical protein HMPREF0183_1388 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1388 [Brevibacterium mcbrellneri ATCC 49030] # 1 216 1 216 216 266 100.0 5e-70 MRSPVPFVVPYLLFLVIFIAGVVGPLLTVFHVVQQQESLGGISPAGLVTGPISLVAGVAS VLLLARGKPVRQAVAAVLLVVSVASWPVTVLLLNIAATGGNIMLVVALSHVLSAVSFFLL LSAWIVAASHAPWMFAVALVATIVNTVLSAVVSFGVSGAAAALQASSGALAASVVLPALV KIVVFTGVVLVGRYMTAGAPNTDGGSGFSASDRIGW >gi|294971436|gb|ADNU01000039.1| GENE 82 74304 - 76508 2220 734 aa, chain - ## HITS:1 COG:MT0805 KEGG:ns NR:ns ## COG: MT0805 COG1770 # Protein_GI_number: 15840196 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Mycobacterium tuberculosis CDC1551 # 2 724 4 698 718 692 50.0 0 MTSEMTPPVAKKVPFERTHHGDTFVDSYEWMRDKDNPDVMAHIEAENAYTQARTAHLDGL RDDIFNEIKTRTKESDMSVPVRRGNFWMLTRTFEGKDYPVMSRVPALPLDHPDAWIPPRV DDEPGENEEVILDLNAEADGHEFFSLGAFSLDEAGKLLVWSADYTGDERYTVKVRDVHTG EDLDDTIENTFAGAFIDPTGNYIFYTTVDEAWRPDTVWRYEIGSEAEPQKIFHEPDERFF VGAGFTRSHEYLMIVAGSKLTSSAWVIPVSNLQAQPRSVWDREDGVSYAVDHAVIAGKGR FVIVHDRNTPDSEAIVVPVDLNASDTQTVLAASEPLIPPTDGMRVEHVEAFEDFLAVTYR SGGFARVGVMEIAEVVEAGQGPITGVGPLKEVKADEPIGTMATGTNPEFAQPTLRLGYES FITPPALFQLDTRTGEKTVLKQQEVLGGIDFSEYRQELVWATADDGEKIPVSLAWNARKV PTGWAPGTDGVGTTSAPMVIYGYGSYEVSADPNFFVSRLSVMERGVVWAVAHVRGGGEMG RHWYDNGKMLTKKNTFSDFIAATKHLHATGVSAPETTVALGGSAGGLLMGVIANEAPEQY AGICAQVPFVDPLTSILMPELPLTVIEWEEWGDPLHDPEVYAYMKSYAPYENVGEHPYPK ILAITSLNDTRVLYVEPAKWVARLREVGADVIMKTEMVAGHGGASGRYSTWKDRAFEYAW VLDTLGLADAEGVK >gi|294971436|gb|ADNU01000039.1| GENE 83 76588 - 77217 591 209 aa, chain - ## HITS:1 COG:no KEGG:Gbro_1087 NR:ns ## KEGG: Gbro_1087 # Name: not_defined # Def: thioesterase superfamily protein # Organism: G.bronchialis # Pathway: not_defined # 40 208 50 217 218 95 33.0 1e-18 MALSEMDAFEALEALKKVKRDPEQVAAWSDMIYEFVRTQDLIARANPPVEEIRQITEHLR AINQSAEKYEADELHRLWRVSRSDKQRGQALLPKFTQTHKDDDGVFSVHLRFGAYYLGAN RVVHGGAQALAFDEGLGYMIMASDQPYSRTAYIKTEFRAPTPVDVDLIMRGWIEKVDGRK TFVRGELVWEDTVCTTVEGLWIALKPGHR >gi|294971436|gb|ADNU01000039.1| GENE 84 77305 - 78591 1315 428 aa, chain - ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 427 1 427 430 681 76.0 0 MPALVVVGAQWGDEGKGKTTDILGTRVDYVVKPNGGNNAGHTVVVGGEKYELKLLPAGIL SPNVVPVIGNGVVVNLEALFEEIDMLESRGADTSKLKISSNAHLVAPYHQVLDRVTERFL GKRAIGTTGRGIGPTYSDKVARLGIRVQDIFDESILRQKIEGALKQKNELLVKVYNRRAV EVEETVEYFLSYAERLRPYVCDTSLLLNQALDEGKVVVMEGGQATMLDVDHGTYPFVTSS NPSAGGAVVGAGVGPTRISRVIGIVKAYTTRVGAGPFPTELFDDMGIYLQKTGGEFGVNT GRPRRCGWYDAVIARYAARVNGFTDYVLTKLDVLDGLDEIPVCVAYDVDGERFDEMPDNQ SDFHHAKPIFETFPGWKEDITGVRKFEDLPENAQNYVLALEKMSGCRMSVIGVGPDREQS IVRHELLD >gi|294971436|gb|ADNU01000039.1| GENE 85 78651 - 79112 460 153 aa, chain - ## HITS:1 COG:no KEGG:Arth_0519 NR:ns ## KEGG: Arth_0519 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 19 151 10 139 140 166 63.0 2e-40 MNQPIGKPVRIGNLDAQQLGPQPTFLPEDHPDSEVAKLVEAGHEPLDIAKDHPASCLAWA LLANEAFDEGRLVDSYAYARVGYHRGLDALRAAGWRGAGPIPWSHETNRGFLRSLYALGR AAAGIGEAEEAQRVEKFLRESDPEALAEIEAGN >gi|294971436|gb|ADNU01000039.1| GENE 86 79122 - 79943 661 273 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395703|ref|ZP_06805895.1| ## NR: gi|295395703|ref|ZP_06805895.1| hypothetical protein HMPREF0183_1393 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1393 [Brevibacterium mcbrellneri ATCC 49030] # 1 273 1 273 273 451 100.0 1e-125 MPSSPESNSEQRTVAPLIAAAVVVVAVLAVVIFNWLKPVPPLTVDMLRTPVVAGYAAGGD LYPPTSEFAVEEMAKFGYLPELPVARTSDGVLVAATDSLLSERMGIEKPIKDVTSEEFLN AQITPPGEKGKPSSPLTIEKALTEYGKATVFVFTLEEENDARDVTELVKKHSQVESVIFR SENPDVLKVAQDENIASLVPNPQSSPEELKTTGADMVEIDADTDTQPYADAGLKVWAHGV KDTNHLSELAKQGFYGAFSGNPFSIQPSSVKTD >gi|294971436|gb|ADNU01000039.1| GENE 87 80001 - 81077 633 358 aa, chain - ## HITS:1 COG:SMb20957 KEGG:ns NR:ns ## COG: SMb20957 COG0463 # Protein_GI_number: 16264830 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Sinorhizobium meliloti # 25 346 14 323 330 129 28.0 1e-29 MKSQKNALSPEALPPLEQTPGITYIMPVLNEEDSLRGAVAAVLDQDYPGPKELIVAMGPC TDNTAEVAASIRDPRLTVVDNPSGDTPTGLNLAVAKAQYPMIIRVDAHSQLSATYTREAV ETLRTTGAANCGGLMQAQGKTAFQKAVARAYMSRLGLGGPAYHSGDEAQESESAYLGAFR AEVFDTLGGFDSTLRRGQDWELNLRIREAGGRVWFNPRMEVTYWPRTTWKKLAQQFYATG IWRAEIVRRHGSKNGIRYFMPPILVIGLSAAVLETVAQLTGTTKRWPKWLSRFTSLVHIP SCAYISAIVANTLRQKDAGVREKLWFAVVLPTMHIAWGSGFLRGLVTGANKDNVDRSR >gi|294971436|gb|ADNU01000039.1| GENE 88 81106 - 81897 1006 263 aa, chain - ## HITS:1 COG:CAC2328 KEGG:ns NR:ns ## COG: CAC2328 COG1134 # Protein_GI_number: 15895595 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Clostridium acetobutylicum # 53 259 32 240 419 181 43.0 2e-45 MDEKTNPESVLAENNTGSLEADNPVVIVDDLHIEFKTLATGKRITSGGTKGFLQRNRKFK TVHALKGVSFVANANESIGIIGSNGSGKSTLMRAITGLIPPTRGAVYAKSRPNLLGVGAA LIPDLSGGQNIILGGLAMGLTREEIEEKYDDIVDFTGIRDFMDMPMRTYSSGMSARLKFA IATAKDYEILIVDEALSVGDRKFQKKSEDRIRAIRENAGTVFLVSHSMRSIRDTCTRTIW IEKGDLRADGDTDSVIREYEANK >gi|294971436|gb|ADNU01000039.1| GENE 89 81881 - 82729 887 282 aa, chain - ## HITS:1 COG:AF0042 KEGG:ns NR:ns ## COG: AF0042 COG1682 # Protein_GI_number: 11497663 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Archaeoglobus fulgidus # 30 279 8 251 254 80 27.0 4e-15 MNAAELAAAHGLERVGARPSLWEYLREVWRRRDFTFSLAFYRIRSENQRNRLGMLWVLLR PTFSALIYGLVFGFIMAGSRPANFVPYLVIGVFIMEFFNSSMNVGGKSIIQNMPLVQSLP FPRAVLPIATVMQNLINFIPTLALMIIIAVFGGARPHVTWLLLIPMVGIFWVFNQGVAFI FARLTVHFRDLSQITPYISRMIFYTSGVFFDPQPLLEGRPVLSALFDWHPMYEVLSLARG IIMEEYSIPWDYWWRFSIWAVVVISISTWFFWKAEERYGRED >gi|294971436|gb|ADNU01000039.1| GENE 90 82788 - 84035 896 415 aa, chain - ## HITS:1 COG:no KEGG:Mnod_0328 NR:ns ## KEGG: Mnod_0328 # Name: not_defined # Def: FAD-dependent pyridine nucleotide-disulphide oxidoreductase # Organism: M.nodulans # Pathway: Fatty acid metabolism [PATH:mno00071]; Phenylalanine metabolism [PATH:mno00360]; Metabolic pathways [PATH:mno01100]; Microbial metabolism in diverse environments [PATH:mno01120] # 98 413 85 403 407 77 30.0 8e-13 MRVVIIGGGAAGTACARSFVQTLASVHADLPADCSVTVVDPLEQPVELPPLSKSLAAEEI SLVPHMTGENVVRLQATVSEVREANETSEARPSEPSARARYIVETSAGELPADVVVYATG LSPRTPTFDALTVYDRDSATRAHRAIHALGPGTSVGVLGSGFLALEIARGLADAGHRPYV YLRGDRPLPKVSAQLAQAVMALHEHVTFVPHTPEPDPTQHPLWFAAVGATSAGPALPNAG RNLESVPFGNLATTHAGYPVGPDLQVTGLPGVYAIGDCARIEGGPMKGVEPAEAAATSMG RWLGAVLGEQATGERASTEGATWTDVPWHWSFQGPVRIFTAGQSLSATSGEPVLLGDPTH RAQWLFFTPDNTLARVETLNNPGAHNVAKRVLASQNLAHRSDVDQSFDMRTWASR >gi|294971436|gb|ADNU01000039.1| GENE 91 84192 - 85751 732 519 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 1 473 1 445 456 286 34 3e-76 VSMDAVVTAINDVVWSPALVYLCLLAGLYFTIRSRVVQLRKIGPIFSYMFSGKGSDSGVS SFQALAMSLAGRVGTGNIAGVATAIAFGGPGAVFWMWIVAFFGASTSFVESTLGQVYKER DRDTGQYRGGPAFFIERAYRHTKASGLFSVYAMVFAFVTVLATSFLLPGVQANGISSAVA QAWGWPTWIPAVIITILLAFIIVGGIKRIATFASLVVPFMAVIYIVGAIVVVFVNASQIP AVISLIVQSALGVDSTFGAMLGVAVSWGVKRGIYSNEAGQGTGPHAAAAAEVSHPAKQGL VQAGSVYIDTLFVCSATAFMILSTGMYNVFSDTAGEELFHAGPGNLPVDTEVGPAFAQNG FDTVLPGLGSSFIAISLGFFAFTTIVAYYYMAETNLAFFLRNVENVHVRQVGFRFLQLFI LVACVVGATTSSGSAWALGDVGVGLMAWLNIIAILILQQPAFKILRDFERQRKEGKDPIF RPSEVGIANADLWEEIADNWERGTPGKNPAEEAQLPDSK >gi|294971436|gb|ADNU01000039.1| GENE 92 85759 - 85935 135 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSRGIVHSMSRDFCVNGLCGYSSRWFSQGQTAQSERNYALYCVVSLALRRFVECLAL >gi|294971436|gb|ADNU01000039.1| GENE 93 85924 - 86946 1320 340 aa, chain - ## HITS:1 COG:ML0286 KEGG:ns NR:ns ## COG: ML0286 COG0191 # Protein_GI_number: 15827063 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Mycobacterium leprae # 1 338 1 341 345 418 61.0 1e-117 MPIATPDEYAHMIDRAKSEGFAYPAINVTSSQTVIAALRGFAEAQSDGILQMSFGGAEYA SGSTVKDKVTGSIALAEFARVVAKNYNVTVALHTDHCQKDKIDTWVKPLIAVSQERVDRG EDPLFNSHMWDGSAIEVPENLDLAAELLELTHNAKQILEIEVGAVGGEEDGVTGEINDKL YTTVEDGMATVEKLGLGEKGRYITALTFGNVHGSYKPGHVKLRPEILKDIQEQVGAKYGK DKPFDLVFHGGSGSTAQEIADAVSYGVIKMNIDTDTQYAFSRPVVDHMLKNYDGMLKIDG EVGNKKMYDPRAWGKLAEAGMAARIVEAAQQLGSAGKSQG >gi|294971436|gb|ADNU01000039.1| GENE 94 87111 - 88541 1247 476 aa, chain + ## HITS:1 COG:Cgl2562 KEGG:ns NR:ns ## COG: Cgl2562 COG2270 # Protein_GI_number: 19553812 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 24 473 9 440 440 288 38.0 1e-77 MEPSDTSASPHGGSTPPAVNLTAASEPAPAPATRSTIVAWALWDWGSAAFNAVIITFVFT PYLTSKVAGDHDTGTAALGFVTALAGLLVAVIAPAAGVRADAKANHHRAVTSFTMIVVAL MGTLFFVKDSPAYFVPGLVILCIAQVVFEIAQVSYNGMLPHISTPANAGTVSNVAWAMGY LGGLALLFIALFTLIQPEVGLFGATDEGGLRFRLVAVLAAMWFLIFSLPLMFSKRTSARP APGDAGPSEAGSGDASPTHPTSRELRGFAAWKADYARVIRRLVELFKVERSTFVFFVASA IFRDGLATIFAMAGVIAAGAYKFSGSEVIYLGIAANVVAGVGCLIAGKFDDWLGPKAVIV TGLICLIAGCVPILVSENKTVFWVTAMWLCLFVGPVQASSRSFLSRITAPERAGENFGLY ATTGRAVSFLGPALFALCVTIFGFQRAGGLGIMIVLALGLALMLMVPAARSIRTRA >gi|294971436|gb|ADNU01000039.1| GENE 95 88566 - 88793 172 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395711|ref|ZP_06805903.1| ## NR: gi|295395711|ref|ZP_06805903.1| hypothetical protein HMPREF0183_1401 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1401 [Brevibacterium mcbrellneri ATCC 49030] # 1 75 1 75 75 90 100.0 4e-17 MSAIITNPLVPTAGDVAMYGVSALALILAVVALFDLLRVSHISSGNKILIALAIILLPIA APVAWLFMRWKKSAR >gi|294971436|gb|ADNU01000039.1| GENE 96 88948 - 90132 1324 394 aa, chain + ## HITS:1 COG:RSc2045 KEGG:ns NR:ns ## COG: RSc2045 COG1960 # Protein_GI_number: 17546764 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 1 394 1 398 398 415 53.0 1e-115 MDNLLSAEELEFAEKMRHFYRTEIPEDIRFRNAIGQEMSKDDIVTTQRILNKHGYAVPNW SQEFGGQDWTPVQHHIWLEEMQLASVPTPLPFNASMVGPVIDTFGSQEIKERFLPATANL DIWWSQGFSEPNAGSDLASLKTSAVKKGDTYIVNGQKTWTTLGQYGDWIFNLVRTDPNVK KQAGISFLLIDMKTPGVTVRPIQLIDGGAEVNEVFFDNVEVPVENLVGEENKGWTYAKFL LGNERTGIARIGQSKVALARAKAYAQATKTSAGTLLDDPLFAARITKIEAELTALEFTQL RVLSTQEKGMDRPDPRSSVLKLRGSQIQQDITELLFDVVGPQGLDFVDSDEVRKTLPHGA GDAMPHYFNYRKVSIYGGSSEVQRSIISKAILGL >gi|294971436|gb|ADNU01000039.1| GENE 97 90203 - 91354 1505 383 aa, chain + ## HITS:1 COG:RSc2044 KEGG:ns NR:ns ## COG: RSc2044 COG1960 # Protein_GI_number: 17546763 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 1 358 1 356 376 194 39.0 2e-49 MDLELTDVQQELGATLGRLLKGKYDAESREAIRTSDAGWSEDMWNQFAELGLMSLPFAEE HGGAGMTFAEVAVVMEAFGRALVLEPYLPTVILGGGLVDIAGTDEQKSEILPGVAAGETR MAFAAQEPGSFYDVTAPQTKAVGSGQVQISGEKSNVVGGAQAHTFVVTAQSEQGLALYLV QADAQGVTVDQRTQADGLSTAHVTFDSAPATQLGTLVGQDAQDAVQRVLDIANAALASEA VGAMEVSLMMTAEYLKTREQFGAPIGVNQVLQHRASDLYAALEFAKSMALYAKLAITQDP DGTSETRHRDVLAAKYVIDDTARLISQEAIQMHGGIGMTMEYPIGHYAKRLTVIPRTFDS KEEVTRELSALGGLIKPEAADLK Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:38:08 2011 Seq name: gi|294971414|gb|ADNU01000040.1| Brevibacterium mcbrellneri ATCC 49030 contig00044, whole genome shotgun sequence Length of sequence - 22780 bp Number of predicted genes - 22, with homology - 21 Number of transcription units - 13, operones - 5 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 66 - 1151 1060 ## COG2130 Putative NADP-dependent oxidoreductases + Term 1171 - 1219 16.2 - Term 1158 - 1205 12.1 2 2 Op 1 . - CDS 1224 - 2339 878 ## gi|295395716|ref|ZP_06805907.1| conserved hypothetical protein 3 2 Op 2 . - CDS 2353 - 2973 495 ## COG0566 rRNA methylases 4 2 Op 3 . - CDS 2970 - 4457 1708 ## CMS_0947 putative integral membrane transport protein 5 2 Op 4 . - CDS 4454 - 5338 910 ## COG4152 ABC-type uncharacterized transport system, ATPase component 6 3 Tu 1 . - CDS 5539 - 6120 694 ## COG0461 Orotate phosphoribosyltransferase - Prom 6305 - 6364 1.7 - Term 6184 - 6226 5.4 7 4 Tu 1 . - CDS 6403 - 7161 539 ## COG0300 Short-chain dehydrogenases of various substrate specificities - Prom 7214 - 7273 1.7 8 5 Tu 1 . + CDS 7188 - 8000 562 ## COG0708 Exonuclease III - Term 8023 - 8092 24.4 9 6 Tu 1 . - CDS 8103 - 10730 1725 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 10918 - 10977 1.6 + Prom 10768 - 10827 2.4 10 7 Tu 1 . + CDS 10946 - 12016 981 ## COG0451 Nucleoside-diphosphate-sugar epimerases 11 8 Op 1 . - CDS 12036 - 13013 788 ## COG0077 Prephenate dehydratase 12 8 Op 2 . - CDS 13013 - 13912 983 ## Sked_01620 hypothetical protein 13 8 Op 3 . - CDS 13992 - 14957 1071 ## COG1087 UDP-glucose 4-epimerase 14 8 Op 4 . - CDS 15003 - 16163 1020 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 16319 - 16378 2.1 15 9 Op 1 . + CDS 16030 - 16281 73 ## 16 9 Op 2 . + CDS 16344 - 17189 276 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 17310 - 17349 10.7 - Term 17294 - 17341 12.7 17 10 Op 1 . - CDS 17376 - 18881 1516 ## Tfu_0607 surface protein - Prom 18911 - 18970 1.7 18 10 Op 2 . - CDS 18981 - 19316 265 ## COG2801 Transposase and inactivated derivatives - Prom 19473 - 19532 2.0 + Prom 19575 - 19634 3.1 19 11 Op 1 29/0.000 + CDS 19655 - 20494 1127 ## COG2086 Electron transfer flavoprotein, beta subunit 20 11 Op 2 . + CDS 20530 - 21480 965 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 21497 - 21541 13.1 + Prom 21531 - 21590 3.3 21 12 Tu 1 . + CDS 21621 - 22001 502 ## KRH_14120 hypothetical protein + Term 22015 - 22055 13.6 - Term 22003 - 22043 13.6 22 13 Tu 1 . - CDS 22158 - 22778 284 ## cur_0037 hypothetical protein Predicted protein(s) >gi|294971414|gb|ADNU01000040.1| GENE 1 66 - 1151 1060 361 aa, chain + ## HITS:1 COG:mlr6843 KEGG:ns NR:ns ## COG: mlr6843 COG2130 # Protein_GI_number: 13475704 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Mesorhizobium loti # 8 360 10 338 339 325 57.0 7e-89 MAVSKAYVLNERPTGAPDANTFAVKEIPVRAPGEGELLLRTLYLSLDPYMRGRLSEAKSY AKPVELGEVMVGATVSEVVDSNADGFSNGDIVLGYGGWQTCSVERAKYVRKLDPDVVPVT TALGVLGMPGFTAYAGLLEIGKPQPGETVAVAAATGPVGSAVGQIAKIKGARAVGIAGGP QKVEQLREFGFDVCADHRDPDFKQNLRDAVGKGSWVERGGAVVSRRGADEESAPSGIDVY FENVGGTVWQAVMPLLNTFARVPVCGLVANYNGTTDPSPAGGMEKLMMLSLAKSLTIRGF IQSEFVRDLEPQFLKDMTEWVASGRVKYLEDITNGFENTVDAFVGMLEGKNFGKTIVKFA D >gi|294971414|gb|ADNU01000040.1| GENE 2 1224 - 2339 878 371 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395716|ref|ZP_06805907.1| ## NR: gi|295395716|ref|ZP_06805907.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 55 371 1 317 317 558 100.0 1e-157 MPRVNVGKQATLGATLTATHSHRSGVTRTKKAIACLLAVVCAFALSACVKLNSDMKISKD LLISGSILFQVDSTAFQGQLGGSPDIQDEIQELQSKLPPEVTVKEVSDDVYKGYELTFTK MKPEDFTAFCEEHFSGVMGRDLVIEKTDNGTIKFSMTNPLTADLGGAFGSGNPFSNPYLG TGGSASAKGVVDESIIKFTFPGKVISADGADVQGKTAVWNLKTFDGDTLTAEAKASGFPW LVLIIIAVVLVILLIIGGVILLVVMSKKKKATQPQQPGFPGGFPPAGGHPGGYSAGGQSG GYPASGGQFGSQPGGYGSAPYGGTGYGSAPAGGAGYGSAPQPGYPQQGNQGYQGNSGNSD QRFQPPAPGAY >gi|294971414|gb|ADNU01000040.1| GENE 3 2353 - 2973 495 206 aa, chain - ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 6 198 1 198 206 239 59.0 2e-63 MTEHLVGVGPWEGPLPDHPRYDPELLAQGDRRNVVDKYRYWTLEAIVADLDRTRHEFHVA VENWQHDLNIGSVVRTANAFNASAVHIVGKKRWNRRGAMVTDRYQHIYHHETAEALAQWC QERELPLIGIDNFPDSVALETYDLPRECVFLFGQEGPGLTDEAHHACEAVLSIEQYGSTR SMNAAAAAAIAMHAWIRRWEFGQAVT >gi|294971414|gb|ADNU01000040.1| GENE 4 2970 - 4457 1708 495 aa, chain - ## HITS:1 COG:no KEGG:CMS_0947 NR:ns ## KEGG: CMS_0947 # Name: not_defined # Def: putative integral membrane transport protein # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 76 435 14 375 376 138 31.0 5e-31 MSQDKSKSGTSNASTNSAGSTPLDPHSMALGLPTDDGSMTEATFVTSDDLPEELRDTRPT DDGPKTGLVSEFRDLTFGQSAFLVSNRETSAVSRSPIFYLTTLIIGLVVIAGLIFGVQRA NQQSGEAGSGTIATVGMAQQAPQIEQQTGLKVHDTNSPEEAEQAVRDGKADAAFIVDPTG MGAPTIIALDKKPTKVLAALGSEPEVTYLEQPAVSYEVAQPVAIGLAGLLIAGALTLAFA MYGNLRVEKRHRIGEILAATIPPKSSAVGRIQGLTTLSVVYVLVAVALLFMGLSVTSYTS QAIAMLPAVGWFAALYLMTVGATLALFLWASNIVGRRARQIAIGVVCALVIVGAFLSLVF ATNPAVMKVLVYVPFTAPVANALHFLGANAEWWNGLLAVGISLVFALIAVAIGAASYQAN LLRGTGRETLSASQKKRLKERSQDSSADKDSKDSKGEKKEKKSAEVDSESDTDKKKVGAK SSAKAGKKPATGDDK >gi|294971414|gb|ADNU01000040.1| GENE 5 4454 - 5338 910 294 aa, chain - ## HITS:1 COG:lin2244 KEGG:ns NR:ns ## COG: lin2244 COG4152 # Protein_GI_number: 16801309 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Listeria innocua # 2 291 3 292 300 134 29.0 3e-31 MLELSDITVKTERKTWLRDISLSIEPGVITGVIGARGSGKTELVRAIMGLIETDSGTITL EDNELGYGDRQNFGYLPAERGGYPHMKVMEQIVYFARLHGMTLGAAERNAVTLLARLDLS DRAYAPLHNLSGSEVACVEIASVIAADPDVVVLDEPFTGLDMKSADLVISLLRDHAESGV PVLFTSDDWDETQRYADQVVVLSHGEIVEHDNVEQLRKKGKPIYRAEFVNEKGAKDAEAA LAGIVSGDFTRKGSIVEFQTSDINRALNAVNGLSGLRNFTTQPANLEELFKERV >gi|294971414|gb|ADNU01000040.1| GENE 6 5539 - 6120 694 193 aa, chain - ## HITS:1 COG:Cgl2715 KEGG:ns NR:ns ## COG: Cgl2715 COG0461 # Protein_GI_number: 19553965 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 10 181 8 172 184 172 60.0 5e-43 MTSRTPEQIAQTKSQLLALIDELAVVRGKVTLSSGKEADYYLDLRRITLDHRSAPLVGDV MLDLFEEHGLLNDLDAAGGLTMGADPVGTAIMHASVQRNTPVDAFVVRKQAKEHGMGRRV EGPDVKGKRVIAVEDTSTTGGSVLTAVEALREAGANVVAVAVVMDRETGAKERVEAEGLP YLIALSTADLGLE >gi|294971414|gb|ADNU01000040.1| GENE 7 6403 - 7161 539 252 aa, chain - ## HITS:1 COG:mll6686 KEGG:ns NR:ns ## COG: mll6686 COG0300 # Protein_GI_number: 13475580 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Mesorhizobium loti # 13 252 6 260 276 97 30.0 2e-20 MNAQPRTNPQPRALITGATSGIGRAFVHQLTAEGYDVIAVARTHADLAQLNATPLPADLS TQHGIATVTHALETQPIDVLINCAGFGVRTSTLDTPVDQLTAQSLVMNEAVRTLSWHAAK KMVARGRGGIVNVTSLAAVTTQGTYAAEKAAATIFTESLAQDLRGTPVTCTAVLPGFVAT DFHCRMGVGREFPDCVWMEPDRVAQIALRDARAGKVISVPGFGYQLLYALSQVTPRPLMR ALSGGFQWKRAR >gi|294971414|gb|ADNU01000040.1| GENE 8 7188 - 8000 562 270 aa, chain + ## HITS:1 COG:Cgl2684 KEGG:ns NR:ns ## COG: Cgl2684 COG0708 # Protein_GI_number: 19553934 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Corynebacterium glutamicum # 10 270 1 263 263 318 60.0 5e-87 MVLQRYGGWVRIVTWNVNSVRARAERIGAFLDRSDVDVLAIQELKCKDAQFPAHVFEDRG YEVAFHGLNQWNGVAVASRVGLDDVEVGFEGVPGFGDDDQVEARAISAVTGGVRTYSLYV PNGRELDHPHYAYKLEWLAQLRNEALVRLEQDVPFVMCGDFNVAPLDEDVWDMAAFEGAT HVSQPERDAFNGLISAGLTEVTRQFTPGPGVYTFWDYQQLRFPKKQGMRIDFQLASPSLA ERATGAFIDREERKGKGASDHAPVWVDYQL >gi|294971414|gb|ADNU01000040.1| GENE 9 8103 - 10730 1725 875 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 860 1 804 815 669 44 0.0 LMDAKFTSRSQEALSAAIKDAVNRGNNQVEPSHLVSALLEPKDSIAGALVTALGADPAEI AREAVALSAALPSLSGSTVSQPQLSRQGLQLINNAEREMQGLGDQFVSTEHLLLAATQDT GEMGRVLTGRGVTRQALLDALPSVRGGKKVTSENPEDTFQSLEKFGVDLTAAAREGKLDP VIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRNKTLIS LDLSAMVAGAKYRGEFEERLKAVLEEIKASDGQIVTFIDEIHTVVGAGATGESAMDAGNM LKPMLARGELRLVGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKERYE AHHKVTISDSALVAAAALSNRYITGRQLPDKAIDLVDEAASRLRMEIDSAPIEIDELQRA VDRLKMEEMALVNESDDASKERLEALREDLADKQEKLAGLNATWEAQRAGLNRVGELKKK LDNLRSQAEIARRDTDLETASRLLYGEIPLVEKEIAEAEAQEAKQAASNDAAGAGKRMVN EQVGSDDIAEVVSAWTGIPAGRLLQGEREKLLHAEDVIGKRLIGQKKAVEAVSDAIRRSR AGVSDPDRPTGSFLFLGPTGVGKTELAKSLADFLFEDERALVRIDMSEYGEKHSVSRLVG APPGYVGYETGGQLTEAVRRRPYSVVLLDEVEKAHPDVFDILLQVLDDGRLTDGQGRTVD FRNTILILTSNLGSQFLVDQNLDDKQKRDSVMGVVNAAFKPEFLNRLDDIVMFDALSTED LTHIVDLQIASMQSRLSERRLTLVVTPAASEWLALEGYDPAYGARPLRRLVQREIGDKLA KEILAGHIHDGDTVTVDRGDEFAGEGLLISSAGER >gi|294971414|gb|ADNU01000040.1| GENE 10 10946 - 12016 981 356 aa, chain + ## HITS:1 COG:YPO1979 KEGG:ns NR:ns ## COG: YPO1979 COG0451 # Protein_GI_number: 16122221 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 345 1 319 338 85 26.0 1e-16 MSIVVTGASGFVGGAIARSLAKSGHQVISLSRTCPDFAEPLTGDIGLPNTRKRPGVWHLD WDIRNPAPEVVKERADAAQAVVHAAGCMNDWMTASYAHAVNVTGTRNVLDAFPDSNFIYF SCALVYDPQVDLDGAYEESALVTAGRYTSELERSLVEAERVVHRVRPDAVILRPGPIYGA GDRNTMPYILKRVENGVLALPAGGKKRITLCHIDNAVAAVEAAIKNPHINGPINVGDPEP YVLQKAINTILARSESHNIVKFEEMPADLSKLKAWWWERKAKMAGGAKKIEKALARQNPE VLKKARAKARPLLTRFAVRQLVHDRTLNLSRLNTLLGVHPVQGLAPRTGELPDDPE >gi|294971414|gb|ADNU01000040.1| GENE 11 12036 - 13013 788 325 aa, chain - ## HITS:1 COG:Cgl2836 KEGG:ns NR:ns ## COG: Cgl2836 COG0077 # Protein_GI_number: 19554086 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Corynebacterium glutamicum # 3 322 8 307 315 189 38.0 6e-48 MKVAYLGPAATFTEAALLQLIESGDVWAGGAGAAGAGDTGGSGRGQIERVPVISANAALD GIASGTYDAAVMPIENSLEGGVPATLDALMRVGHARIVAETVVPVRFVLAARPGTALADV QAFGTHPHAEAQTREWMGAHLPDAQFMPAPSTAAAAKQLGAGEAPFQAAVCPELAAHTYG LEVVADDIGTAKNAVTRFILVKPNPQLPTPTGADKTTIVATLATDNAGSLLGLLEQFSAR RVNLSRIESRPTGDGLGLYKFSIDISGHVREPRVSEALAGVHRMVRKLQFLGSYPAADGI PVEVDSTSTASSFDDSTAWVRSILG >gi|294971414|gb|ADNU01000040.1| GENE 12 13013 - 13912 983 299 aa, chain - ## HITS:1 COG:no KEGG:Sked_01620 NR:ns ## KEGG: Sked_01620 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 17 299 1 275 275 228 48.0 2e-58 MGKKSKKSTADVIAKRLARQKAAAFVPRPFEGLPFETDLVSLRELVPAATATAKLTEEYG GDDVTFATLLPAAWQAMNRQDGVIMAGLQTPHSSPDPSRDLAAAILKVKEQGPGAYAEPN SNPGEGPRLQDILDTSVPFKVTVKETFDYWLPEEVDLPEDSAFSEEQLREGLEQANQRIS PTEKLVSAEGCYWTEMAGRCYVRWAFTEPEDTVMDGLARLHAAGENNLGGLGKYLGCFRA HGIVIPVWELSENQTPDDVDAVLGDFAKKLHAAMDETGSLTPEQRRAKSGVVSRQLTIR >gi|294971414|gb|ADNU01000040.1| GENE 13 13992 - 14957 1071 321 aa, chain - ## HITS:1 COG:all4713 KEGG:ns NR:ns ## COG: all4713 COG1087 # Protein_GI_number: 17232205 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Nostoc sp. PCC 7120 # 2 306 7 313 332 239 44.0 4e-63 MTVMVTGGAGYIGSHVVRLLHERGDSVVIVDDMSNGIASRIEGLPLEQIDVSSHAATEQL GEVIKRYNVDSVVHFAAKKMAGESVENPLKYYRNNVAGLANLLDALVAHGVNRLVFSSSA LVYGMQDRLLLAEEHVGQHPSNPYGETKLIGEWMIDDVAAVSDLRAIKLRYFNVAGAGWP ELADTAVQNLIPIVLNQVENGEQSVIFGDDYPTDDGTCIRDYIHVKDLAEAHVVALDALE AGSNPQTVYNVGTGNGSSVREVIAELSDALGRPIDAVVGDRRPGDPARLVADVTAARQDL GWKAEYGLKEIAQSSVEARGQ >gi|294971414|gb|ADNU01000040.1| GENE 14 15003 - 16163 1020 386 aa, chain - ## HITS:1 COG:PA0446 KEGG:ns NR:ns ## COG: PA0446 COG1804 # Protein_GI_number: 15595643 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Pseudomonas aeruginosa # 14 384 3 390 407 318 46.0 1e-86 MSRSRPSFGRTPTGPLAGILVADFSRVLAGPYATMLLADLGATVIKVEGLTGDETRGWRP PVHEGEATYFLGTNRNKHDVVLDFKDENDCALAQKLASRADVVVENFKAGGLKKFGLDYD TVAQTNPSVVYASITGFGGNNPQPGYDLLIQGLSGFMSITGAPDSAGGEPTKAGFAVFDI ITGLHTALGIVSALHHRQESGEGQHVETNLLSSALSGLANQSAAFVTGGVIPTRMGNEHP SLYPYLPLPTGEGDLLLAVGNDRQFASLCRVLDIPEVVSDERFATNAGRTGNRTDLAPIL IDALSRKSAQEWYDLLTAAGVPCAPINDISQGVALAQKLGLNPIATPENTPTVANPITLS ATPVSYDMDPPGLGKDSEDIKQWLRE >gi|294971414|gb|ADNU01000040.1| GENE 15 16030 - 16281 73 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVAPRSASSIVAYGPANTREKSATRIPARGPVGVRPKLGRERDTIYLFVRSSLFQLNID PMISLFALHDFSPADAPSSFAVS >gi|294971414|gb|ADNU01000040.1| GENE 16 16344 - 17189 276 281 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 39 276 4 240 242 110 34 6e-24 MPQSTDTQALAVVASNANVSRSDSPQSRRKFYPQRFTGKVAVVTGASRGIGLGIAQRLAR EGAKVVLTGRNADTLTQATSTVGGPLQVIGLAGKADDPQHREQVFGLAREKFGPVDVLVN NVGINPVFGPMIDIDLDAARKIFEVNALGALAWTQLAYESGMKRRGGSVLNLSSVAASRQ PVGIGFYGSSKAMVEHITRQLAMELGPQVRVNAVAPAVVKTKFAEKLYEGREAEVSADYP MKRLGEPEDVAAAAAFLLSDEASWITGQVLTLDGGRSLGGE >gi|294971414|gb|ADNU01000040.1| GENE 17 17376 - 18881 1516 501 aa, chain - ## HITS:1 COG:no KEGG:Tfu_0607 NR:ns ## KEGG: Tfu_0607 # Name: not_defined # Def: surface protein # Organism: T.fusca # Pathway: not_defined # 3 380 14 371 414 110 32.0 1e-22 MKIRRISKLIAATAVASLAFLAPVVGAPAFADSVPENGAKAVAKSGQSGDRVRVTHGNRV KNLGTTVFNITVDGKEYKSYCIELDKPFAEGNGSVQAWEDLDEVSKNKVGWILENSYPKV NVTELAKNSGVEGLTYRQAISATQAAVWHFTTKGGSDLVADSSKWTNSQADKIIKLYKYL IGDANVGVNFSDNHADVDVSLEGGKTYKAGDKVGPIKVSSSQKTVKLQAEPQGDAYVIVD SEGNQVDLDAVKPGELFVQINKDAPKGSLTLTATSAASSLTGRVFVHDIQNKQRVVLIDT KKDVKQAKVNFEWGQDETPPPCDNETPPGDNETPPCEEETPPGDKGTPPPCDNETPPGDN ETPPCEEETPPGDQETPPGDKGTPPPCDNETPPGDNETPPCEEETPPGDQETPPGDNDTP KPGDNDTPKPGDNDTPKPGDNDTPKPGDNDTPKPGDNESDDNGSSDLPRTGAEFAGALVA AIVLIVGGVAALFVARRKQNN >gi|294971414|gb|ADNU01000040.1| GENE 18 18981 - 19316 265 111 aa, chain - ## HITS:1 COG:Z1660 KEGG:ns NR:ns ## COG: Z1660 COG2801 # Protein_GI_number: 15801145 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 96 190 285 295 86 41.0 1e-17 MHHSDYGLQYDSVVYNEWLSLHRIVASAGTVSDSRGNVLAENVNGSHENELIHTRKWNDV VDVEIATFEWVSWWNEARLHQSLGYRTPSEIETEFWKQNPPQEIIEIKANA >gi|294971414|gb|ADNU01000040.1| GENE 19 19655 - 20494 1127 279 aa, chain + ## HITS:1 COG:MT3113 KEGG:ns NR:ns ## COG: MT3113 COG2086 # Protein_GI_number: 15842592 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 18 279 4 266 266 187 44.0 2e-47 MYDHSAIGPGRMTADMRIVTFVKYVPDAAGDRTFNDDNTVDRESDGILSELDEYAVEEAL KIKEAVGDAEVIALTVGPEDAEDAVRKALQMGADSGVHVDDEDIEGTCAVGTAKVLAAAI KAYEEEEEEQVDLILTGLSSTDGGMSVMPTMVAELLGRPAATQASEVTVEGSTVRIRRDG DTSSQFIEVNLPAVVSVTDQINEPRYPSFKGIMAAKKKPIDYYDLEDIELDEAEVGFDGA TTQVVNIAERPPRTAGEIVTDEGEGGNQLVEWLASKKLV >gi|294971414|gb|ADNU01000040.1| GENE 20 20530 - 21480 965 316 aa, chain + ## HITS:1 COG:MT3112 KEGG:ns NR:ns ## COG: MT3112 COG2025 # Protein_GI_number: 15842591 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 316 1 317 318 248 54.0 8e-66 MSEVLVLVDHVDGNVQKSTFELLAIAQQSGEPVAVFVGSDDQAQNAAAPLGQYGATKVLV ASDPALNEYLVAPKAELLAQLISERQPAGVLVSSTAEGKEIAGRTAIKSGSGVITDAVEV EADFTATQSVFAGAYTVTGKVTKGTPIVAVKPNSVSPVEAGAQAAVEAVNFTASDAAKTA RIVSVEEKPSSGRPNLTEAPIVVSGGRGTGGDFGPVEALADSLGAAVGASRAAVDAGWYP HSSQVGQTGKVVSPQLYVAAGISGAIQHRAGMQTSKNIVAVNKDAEAPIFELADYGVVGD LFNVLPQATEAINARK >gi|294971414|gb|ADNU01000040.1| GENE 21 21621 - 22001 502 126 aa, chain + ## HITS:1 COG:no KEGG:KRH_14120 NR:ns ## KEGG: KRH_14120 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 1 124 1 132 139 66 34.0 4e-10 MKKRLVLLAGIGIGFVLGSRAGRQSYENLKRQATNLWNDPKVQDGIDTAREQIEEKAPVV AQAVKDKAPVVVDKVKEAADAGVAKAKEATNDVKTKVENDPKADVPDDVVSDPATPMDEE GPAPTK >gi|294971414|gb|ADNU01000040.1| GENE 22 22158 - 22778 284 206 aa, chain - ## HITS:1 COG:no KEGG:cur_0037 NR:ns ## KEGG: cur_0037 # Name: not_defined # Def: hypothetical protein # Organism: C.urealyticum # Pathway: not_defined # 1 206 21 226 226 273 65.0 3e-72 SAYSFHPDPEALYVWNTRVTKYFLEDIQHVEVLLRNCVDKAVSPRYGEHWYNNSAIPFTR EAKRAVAKALKRVGATKDKMPSSGQVIAELSFDFWAYLFTSNYSSTIWPLVRKTLIATPT AGTQSSRSSISVPSLSDFKDEVDVAYRLRNRCAHHEPIIRKNRQEEEFKLDRVQQAIEAL SRWIDPNAAEWISAHSRLFELRKNRP Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:39:06 2011 Seq name: gi|294971411|gb|ADNU01000041.1| Brevibacterium mcbrellneri ATCC 49030 contig00045, whole genome shotgun sequence Length of sequence - 1424 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 + CDS 51 - 776 409 ## COG3328 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 955 - 1395 225 ## COG3328 Transposase and inactivated derivatives Predicted protein(s) >gi|294971411|gb|ADNU01000041.1| GENE 1 51 - 776 409 241 aa, chain + ## HITS:1 COG:RSc0252 KEGG:ns NR:ns ## COG: RSc0252 COG3328 # Protein_GI_number: 17544971 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 28 228 18 218 416 202 47.0 4e-52 MTVTDTRGNSESAAELVEQLKASGALDELFAKIDSGQVELTGDGGLVPALIKETLERGLQ AELTSHLGYESGNRDDKSTTNSRNGSYAKTVATESGSVEIAVPRDREGSFTPRLVPKGSR RLGGLDDMIISLYAGGMTIRDIQHHLETTIGTELSHETISNITDAVMESVMEWQNRPLEE FYPVIYLDAIRVKVRDNGHVRSKAAHIAVGVDMDGIKHVLGIWVQNTERGVLVGACVRRA C >gi|294971411|gb|ADNU01000041.1| GENE 2 955 - 1395 225 146 aa, chain + ## HITS:1 COG:RSc0252 KEGG:ns NR:ns ## COG: RSc0252 COG3328 # Protein_GI_number: 17544971 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 141 292 410 416 119 44.0 2e-27 MYTAANEDTALQALTDFASSPLGKKYPSAVATWENAWDRFTPFLAFPPALRRVIYTTNAI ESLNYQLRKVTKNRSQFPTDESVVKLLWLAICNIEDKRARERAKNREAGKINQKNIRLIQ GRQTTNWKQALAQLATAYPDRINKYL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:39:10 2011 Seq name: gi|294971400|gb|ADNU01000042.1| Brevibacterium mcbrellneri ATCC 49030 contig00046, whole genome shotgun sequence Length of sequence - 10423 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 5, operones - 4 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 15/0.000 - CDS 3 - 798 637 ## COG2217 Cation transport ATPase 2 1 Op 2 . - CDS 869 - 1303 285 ## COG2608 Copper chaperone 3 2 Op 1 . + CDS 1484 - 2218 702 ## KRH_06610 hypothetical protein + Prom 2247 - 2306 1.7 4 2 Op 2 . + CDS 2361 - 2618 409 ## PROTEIN SUPPORTED gi|62426256|ref|ZP_00381384.1| COG0254: Ribosomal protein L31 + Term 2621 - 2687 19.2 - Term 2619 - 2662 11.6 5 3 Op 1 . - CDS 2678 - 3508 975 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 6 3 Op 2 . - CDS 3610 - 4077 460 ## COG0219 Predicted rRNA methylase (SpoU class) 7 4 Op 1 . + CDS 4126 - 4779 411 ## Kfla_3156 hypothetical protein 8 4 Op 2 6/0.000 + CDS 4772 - 6346 801 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 9 4 Op 3 . + CDS 6346 - 9444 2356 ## COG0587 DNA polymerase III, alpha subunit 10 5 Tu 1 . + CDS 9549 - 10422 932 ## COG2873 O-acetylhomoserine sulfhydrylase Predicted protein(s) >gi|294971400|gb|ADNU01000042.1| GENE 1 3 - 798 637 265 aa, chain - ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 13 265 17 276 755 248 51.0 1e-65 MSAPAPLSADSSIELEVGGMTCASCANRIERKLNKLDGVTASVNYATEKAKVTVPAGYDP ALLVAEVEKTGYTAALPRPEAATTDSEGNDQDPADDPELTSLKQRLIGSIVLTVPVIAMA MVPVLQFTYWQWASLALAAPVIVWAGWPFHKAAWTNLKHGTATMDTLVSMGTSAAFLWSL YALFLGHAGMPGMTHPFEFTIAPSDGAGNIHLEAAAGVTMFILAGRYFEKRSKRQAGAAL RALLELGAKEVSVLRDGAEIKIPTS >gi|294971400|gb|ADNU01000042.1| GENE 2 869 - 1303 285 144 aa, chain - ## HITS:1 COG:Cgl3020 KEGG:ns NR:ns ## COG: Cgl3020 COG2608 # Protein_GI_number: 19554270 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Corynebacterium glutamicum # 76 142 1 66 67 62 56.0 3e-10 MISSAVSTTSCSQCWPRQGSGAALFTAPAYPGGVSPRNVGSIQERARLTLQEYPIWVYGS QDGTRRGYPSREGYPMTANEYQVTGMTCGHCEASVREEVGEIAGVTGIEVSAETGRLVVT TSGEIDDAQVLAAVEEAGYSAVRA >gi|294971400|gb|ADNU01000042.1| GENE 3 1484 - 2218 702 244 aa, chain + ## HITS:1 COG:no KEGG:KRH_06610 NR:ns ## KEGG: KRH_06610 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 2 241 9 253 265 225 49.0 1e-57 METLAQQLEQAAITGKVATPREINLLHIHRFLAGERQFDFGVTLTRDWDYDSVFQLMVDA CGINPDPDFTEGVDTISTQRCIEQLDLMRAAIQDVASRGGRILFATGHPSGLLPVHVRMR DWAVNLGARTVEQTDFVPVEIGGDARTVLGVWVWHQHGGLPHTHLAEPAQAVLSQVEAPD LVVADHGWAGAAGSAGIRTVGFADCNDPALFVAQAQEQVEVCVPLDDNIPPHLYEPLIAH VCRD >gi|294971400|gb|ADNU01000042.1| GENE 4 2361 - 2618 409 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62426256|ref|ZP_00381384.1| COG0254: Ribosomal protein L31 [Brevibacterium linens BL2] # 1 84 1 84 84 162 88 1e-39 MKKDIHPEYRPVVFNDLASGTKFFTRSTVKTEKTIEWEDGNTYPLVDVEISSASHPFYTG KQRILDSAGRVEKFKDRYKGFGKRK >gi|294971400|gb|ADNU01000042.1| GENE 5 2678 - 3508 975 276 aa, chain - ## HITS:1 COG:BS_thiD KEGG:ns NR:ns ## COG: BS_thiD COG0351 # Protein_GI_number: 16080853 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Bacillus subtilis # 3 262 4 266 271 177 40.0 2e-44 MTHRALTFAGLDVSGGAGLSADLKMFEEYGVFGSTVETCIVTFNPEKDFVHEIEFVDEDI VARQLTSVLGIHSFDVIKSGMLGSVDNALVLADHIEKAHIPYVFDPVLVCKGAGTMVDLK DLFLEKLVPHATVITPNLEEAATLVGAESLNSVEDMVEAARTLHSKGAQNVIVKGGARLD GPTAVDVIFDGTTVTELSTTKVNNHLVNGAGCSFASSIAAGLATGLDLVAAATSAKEKIA HGIAASIENATGVRSLLHCAWRTEPTDSITVEARTL >gi|294971400|gb|ADNU01000042.1| GENE 6 3610 - 4077 460 155 aa, chain - ## HITS:1 COG:ML0419 KEGG:ns NR:ns ## COG: ML0419 COG0219 # Protein_GI_number: 15827131 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Mycobacterium leprae # 4 153 7 156 158 186 61.0 2e-47 MPIQIVFHTPEIPGNTGNAIRLAAVTGAHLHLVEPLGFDLSDAKLRRAGLDYHDLAHVTV HPTIEHLWEELGHKRVIAFTTHTTHTFDTVEYTSDDVLLFGKESTGLPAEVAEDPHVDLA VRIPMLEGRRSLNLANSASIATYEAWRQLGYPGGK >gi|294971400|gb|ADNU01000042.1| GENE 7 4126 - 4779 411 217 aa, chain + ## HITS:1 COG:no KEGG:Kfla_3156 NR:ns ## KEGG: Kfla_3156 # Name: not_defined # Def: hypothetical protein # Organism: K.flavida # Pathway: not_defined # 17 198 17 204 246 72 27.0 2e-11 MFDTVGVSALRDFHKLRSLPGVRTAGDLATSRPVFPVPGALSSVFSRGGLRRGDITQIVG THGFSVALAVVSQATQERHWCASLGVGVPAVAALSDFNIALDHYVNVAVEPGDTVQALSI LIDTFAIVITQPVQMSPGQRSRLHSKVREKNMSLIVLRDFPHTGEKLTVSEPQWEGIDYG SGHLTGYSVHVANPAVGSVRIELPGAERASSQVIRLV >gi|294971400|gb|ADNU01000042.1| GENE 8 4772 - 6346 801 524 aa, chain + ## HITS:1 COG:Rv3394c KEGG:ns NR:ns ## COG: Rv3394c COG0389 # Protein_GI_number: 15610530 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Mycobacterium tuberculosis H37Rv # 1 523 1 526 527 213 32.0 1e-54 MSEGARTLVLTVPDWPALAVTLREDINVSEPVIVVRAGVVYAANAHARKHGVIRGMNTRS AQLRCPHAHVYPFDLDRDHQEFATAVTVLDKLVARFSLFHPGTVTIPVSSLERTYENEEH AVHDLLTELIDATGWEVFTGIADTPFAALLAADSQTRVEPGATGKFLAPLSVDRLRLVDT QFTPLTVLLHRLGIDRLGQLAALPRTQVYTRFGETGARAWLLASGHTYELPQEHVRARDF TVSGSLEPPTGRLDVISFKARELATDFVDRIRESGLVCTHVRIVLHASSHTYERTWHLDT LTETALADRVRWQAAGWQGSRTEKAPHAEDSDVRDTSDVSDDSGDGVHRIEFYAQELVAP LRAQSNLFAPHTDDVGAALERIQGLFGIEAVSTPGLQGGRSPEETNLWTPWRHSTEPTRD PQAPWPGALPPPRPTLVENTPVDLLNEYGEQVVARPAGLDSTPRVLRTQEGTQAVTNFSS AWPVDTQWWGEHQYHVRCQIVTETGEAYVLCKEAGQWAIVGRYA >gi|294971400|gb|ADNU01000042.1| GENE 9 6346 - 9444 2356 1032 aa, chain + ## HITS:1 COG:MT3480 KEGG:ns NR:ns ## COG: MT3480 COG0587 # Protein_GI_number: 15842966 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 2 1032 65 1098 1098 959 53.0 0 MYAELHAHSNFSFLDGASDPEELVHAAHAAGLSALALTDHNGLYGAVRFAQEAQRVGMPT VFGAELSLDLAHKIPGQKDPQATHLLVLARSVDGYRQLSRAISQGYEHGEKNRPILHLEE LAALDPDWYILTGCRKGPLIPHLGDPDGGVSALRGLTELFPDRVVVELTRFGHPTDDARI EHLTHLATRASLPTVATNAVHYAYRSGYRGAHVRAAIRSHASLDELAGWLPADATAYVRT PHDMRERFGPGPVETAHRIGQECAFELSAAQVGLPQAPVPPGRDADEHLRELVYAGARRR YGDRSEHPRAWEQIDSELATITSMGFAGYFLIVEDIARFCHTNGIYCQGRGSAANSAVCF VLGITAVDAVKFQLLFDRFLSPQRAGYPDIDIDIESGRREEVIQYVYRTYGRTRAAQVAN VITYRTKSAVRDAASAFGYSPGQQDAFAKTTHRGALSPDTDEPPHVPAPVLEAARDLHDS PRHLGIHSGGMILTDRPIYDLVPIEPAAMEGRTVIQWDKDDSAAMNLVKFDLLGLGMLEA LRHMNELVKKHTGHAVDRGNIPQEDGVYDMLCRADAVGVFQVESRAQLSTLPRMRPRNFY DLVVEIALIRPGPIQGESVHPYLRRRQGVEPVTYAHPALKNSLGKTLGVPLFQEQLMQIA IDVAGFSGADADELRRAMGARRSARTMAALEERFYQGCSARGVEPTVAREIFGKIAAFAD YGFPESHALSFANLVYESAWFKYRHHAAFTAALLRSQPMGFYSPQSLIADARRHGVNIRA VDINLSHEHSDLEPDPQSVGGFAIRLGLTSVKGISAEVATQVVTHRTQPYTSIEDLACKT GIPSDALEALATAGAYESFGVDRRQALWIAGSLAGAGPDTLPGTSAVMEAPALPLMTEFD TTLAELFSTGMTVNGYPTEHLRAALNARGLASTRDAMNAQAGARITVAGIVTHRQRPKTT TGVTFFNIEDEFGMLNVVCSPGLMKRFAPVSYTRSTVTVTGTVQRAGEVVSLYAQKITAL DVQIPTSARNFR >gi|294971400|gb|ADNU01000042.1| GENE 10 9549 - 10422 932 291 aa, chain + ## HITS:1 COG:MT3443 KEGG:ns NR:ns ## COG: MT3443 COG2873 # Protein_GI_number: 15842936 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Mycobacterium tuberculosis CDC1551 # 3 291 17 295 449 341 61.0 1e-93 MTAFETLQIHEGQTPDSETGARALPIYQTTSFVFDDAQLAADRFALKDLGPVYTRLANPT VQAVEERIAALEGGVGAVLTSSGQAAAFLAIVNIAGAGDHIVASPSLYGGTYNLLDITLR KLGIDTTFVENPDNIDEWKEAVRPNTKAFFGETLTNPQSAVLNLPELSKAAHDAGVPLIV DNTLATPYLLRPIEHGADVVLHSATKFLGGHGTSIAGVIVDSGNFDYSADPEKFPGFNEP DASYNGLVYARDLGPDSDFGANVSYGIKIRVQLLRDLGPSASPFNAFLIAQ Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:39:58 2011 Seq name: gi|294971285|gb|ADNU01000043.1| Brevibacterium mcbrellneri ATCC 49030 contig00047, whole genome shotgun sequence Length of sequence - 126156 bp Number of predicted genes - 115, with homology - 112 Number of transcription units - 62, operones - 27 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 464 - 700 99 ## COG3093 Plasmid maintenance system antidote protein 2 1 Op 2 . - CDS 697 - 1053 140 ## COG1359 Uncharacterized conserved protein - Prom 1082 - 1141 2.9 + Prom 1129 - 1188 2.2 3 2 Tu 1 . + CDS 1299 - 2465 484 ## CMS_1759 hypothetical protein 4 3 Tu 1 . - CDS 2691 - 3665 446 ## SAV_726 oxidoreductase - Term 3728 - 3763 -0.7 5 4 Tu 1 . - CDS 3799 - 4233 540 ## COG0012 Predicted GTPase, probable translation factor 6 5 Op 1 . + CDS 4371 - 5222 813 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 7 5 Op 2 5/0.000 + CDS 5305 - 5664 272 ## COG0640 Predicted transcriptional regulators 8 5 Op 3 . + CDS 5661 - 7553 1422 ## COG2217 Cation transport ATPase 9 6 Tu 1 . - CDS 7632 - 8291 190 ## COG2072 Predicted flavoprotein involved in K+ transport 10 7 Op 1 . - CDS 8821 - 9081 68 ## gi|300933528|ref|ZP_07148784.1| hypothetical protein CresD4_05617 11 7 Op 2 . - CDS 9095 - 9484 344 ## COG0789 Predicted transcriptional regulators - Prom 9529 - 9588 2.3 12 8 Op 1 . + CDS 9583 - 11004 456 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 13 8 Op 2 . + CDS 11054 - 11221 87 ## gi|295395764|ref|ZP_06805952.1| hypothetical protein HMPREF0183_1450 14 8 Op 3 . + CDS 11253 - 11618 210 ## gi|227487866|ref|ZP_03918182.1| conserved hypothetical protein 15 8 Op 4 . + CDS 11704 - 12096 148 ## jk1443 hypothetical protein 16 9 Op 1 . - CDS 12100 - 13266 1487 ## COG0012 Predicted GTPase, probable translation factor 17 9 Op 2 3/0.222 - CDS 13214 - 14377 371 ## COG4924 Uncharacterized protein conserved in bacteria 18 9 Op 3 . - CDS 14364 - 17687 2003 ## COG4913 Uncharacterized protein conserved in bacteria 19 9 Op 4 . - CDS 17684 - 18304 509 ## Mlut_22900 hypothetical protein 20 9 Op 5 . - CDS 18301 - 19764 959 ## Mlut_22890 methyl-accepting chemotaxis protein 21 10 Tu 1 . + CDS 19868 - 21019 566 ## COG2508 Regulator of polyketide synthase expression 22 11 Op 1 1/0.333 + CDS 21130 - 21591 273 ## COG2031 Short chain fatty acids transporter 23 11 Op 2 . + CDS 21582 - 22451 889 ## COG2031 Short chain fatty acids transporter 24 11 Op 3 . + CDS 22457 - 24445 1333 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 25 11 Op 4 . + CDS 24499 - 25644 949 ## COG1322 Uncharacterized protein conserved in bacteria - Term 25679 - 25716 9.2 26 12 Op 1 . - CDS 25736 - 26248 565 ## COG1528 Ferritin-like protein 27 12 Op 2 . - CDS 26285 - 27346 442 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 28 13 Op 1 . + CDS 27444 - 28757 1058 ## COG1570 Exonuclease VII, large subunit 29 13 Op 2 . + CDS 28754 - 28990 410 ## Mlut_16330 exodeoxyribonuclease VII small subunit - Term 28797 - 28840 1.1 30 14 Tu 1 . - CDS 29027 - 29593 611 ## gi|295395781|ref|ZP_06805969.1| conserved hypothetical protein 31 15 Op 1 . + CDS 29710 - 30828 1117 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 32 15 Op 2 . + CDS 30828 - 31475 668 ## COG0288 Carbonic anhydrase 33 15 Op 3 . + CDS 31472 - 32878 1638 ## COG0114 Fumarase + Term 32908 - 32952 16.0 34 16 Tu 1 . - CDS 32970 - 34292 1089 ## COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH 35 17 Tu 1 . - CDS 34466 - 35239 665 ## COG0020 Undecaprenyl pyrophosphate synthase + Prom 35223 - 35282 1.8 36 18 Tu 1 . + CDS 35327 - 36094 701 ## COG1272 Predicted membrane protein, hemolysin III homolog - Term 36008 - 36051 2.1 37 19 Op 1 . - CDS 36130 - 36432 407 ## gi|295395788|ref|ZP_06805976.1| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 38 19 Op 2 . - CDS 36429 - 37385 776 ## COG2120 Uncharacterized proteins, LmbE homologs - Prom 37414 - 37473 2.6 39 20 Tu 1 . + CDS 37463 - 37858 350 ## gi|295395790|ref|ZP_06805978.1| conserved hypothetical protein + Term 37872 - 37919 7.0 40 21 Tu 1 . + CDS 37960 - 38451 679 ## COG0782 Transcription elongation factor + Term 38469 - 38504 7.4 - Term 38457 - 38492 7.4 41 22 Tu 1 . - CDS 38511 - 39908 1347 ## COG0628 Predicted permease 42 23 Op 1 . + CDS 39921 - 40793 576 ## SCO3078 secreted protein 43 23 Op 2 . + CDS 40790 - 41464 567 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 44 23 Op 3 . + CDS 41550 - 43292 1408 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit - Term 43175 - 43217 -0.8 45 24 Tu 1 . - CDS 43312 - 44742 569 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 44869 - 44928 1.6 + Prom 44798 - 44857 2.0 46 25 Tu 1 . + CDS 44988 - 45236 199 ## Celf_2534 transcription factor WhiB 47 26 Op 1 . - CDS 45292 - 46758 1189 ## COG3920 Signal transduction histidine kinase 48 26 Op 2 . - CDS 46762 - 51687 3889 ## COG2902 NAD-specific glutamate dehydrogenase 49 27 Tu 1 . + CDS 51786 - 52250 377 ## gi|295395800|ref|ZP_06805988.1| hypothetical protein HMPREF0183_1486 - Term 52094 - 52150 11.6 50 28 Op 1 . - CDS 52212 - 52652 391 ## gi|295395801|ref|ZP_06805989.1| conserved hypothetical protein 51 28 Op 2 . - CDS 52649 - 53863 848 ## Jden_1816 hypothetical protein 52 28 Op 3 . - CDS 53860 - 54480 514 ## Bfae_20550 SAF domain-containing protein - Prom 54569 - 54628 2.2 53 29 Op 1 . + CDS 54468 - 54620 64 ## 54 29 Op 2 . + CDS 54610 - 54828 251 ## Krad_3803 transcriptional regulator 55 30 Tu 1 . - CDS 54832 - 55335 232 ## gi|295395805|ref|ZP_06805993.1| conserved hypothetical protein - Prom 55360 - 55419 2.5 + Prom 55357 - 55416 6.1 56 31 Op 1 . + CDS 55437 - 56165 373 ## gi|295395806|ref|ZP_06805994.1| LysM domain protein 57 31 Op 2 . + CDS 56162 - 56593 160 ## gi|295395807|ref|ZP_06805995.1| conserved hypothetical protein + Term 56682 - 56712 0.4 58 32 Op 1 7/0.000 - CDS 56632 - 59334 2918 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 59381 - 59440 2.9 - Term 59408 - 59443 6.4 59 32 Op 2 6/0.000 - CDS 59455 - 60111 494 ## PROTEIN SUPPORTED gi|237670455|ref|ZP_04530429.1| sigma 54 modulation protein; SSU ribosomal protein S30P 60 32 Op 3 . - CDS 60161 - 60862 501 ## COG1040 Predicted amidophosphoribosyltransferases 61 32 Op 4 . - CDS 60866 - 62542 1209 ## Jden_1825 hypothetical protein 62 32 Op 5 40/0.000 - CDS 62542 - 64218 1121 ## COG0642 Signal transduction histidine kinase 63 32 Op 6 . - CDS 64215 - 64895 719 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 64968 - 65027 2.5 64 33 Op 1 . + CDS 65097 - 66230 1025 ## Lxx05340 integral membrane protein 65 33 Op 2 . + CDS 66230 - 66871 672 ## gi|295395816|ref|ZP_06806004.1| possible delta-aminolevulinic acid dehydratase 66 33 Op 3 . + CDS 66868 - 68070 886 ## MTES_0532 hypothetical protein 67 33 Op 4 23/0.000 + CDS 68067 - 69287 1149 ## COG0714 MoxR-like ATPases 68 33 Op 5 . + CDS 69287 - 70579 869 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 69 34 Tu 1 . - CDS 70585 - 71577 917 ## COG1300 Uncharacterized membrane protein - Prom 71624 - 71683 2.0 70 35 Tu 1 . + CDS 71642 - 72457 472 ## COG1714 Predicted membrane protein/domain 71 36 Op 1 . - CDS 72494 - 73897 1012 ## COG1109 Phosphomannomutase 72 36 Op 2 . - CDS 73894 - 74220 174 ## SAV_5046 hypothetical protein 73 37 Tu 1 . + CDS 74080 - 74625 260 ## gi|295395824|ref|ZP_06806012.1| conserved hypothetical protein 74 38 Tu 1 . - CDS 74639 - 74881 316 ## gi|295395825|ref|ZP_06806013.1| conserved hypothetical protein - Prom 74930 - 74989 2.3 - Term 74932 - 74982 13.1 75 39 Tu 1 . - CDS 75005 - 75439 383 ## SCAB_55081 sporulation regulatory protein - Prom 75479 - 75538 3.4 + Prom 75483 - 75542 2.2 76 40 Op 1 . + CDS 75763 - 76803 1033 ## Intca_2521 F420-dependent oxidoreductase 77 40 Op 2 . + CDS 76800 - 77399 436 ## gi|295395828|ref|ZP_06806016.1| conserved hypothetical protein 78 40 Op 3 21/0.000 + CDS 77438 - 78208 715 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 79 40 Op 4 . + CDS 78205 - 78870 649 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit + Term 78882 - 78925 13.1 80 41 Tu 1 . - CDS 78930 - 80099 976 ## COG1482 Phosphomannose isomerase - Term 80135 - 80187 18.5 81 42 Tu 1 . - CDS 80203 - 82683 1653 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis - Prom 82769 - 82828 5.7 82 43 Tu 1 . + CDS 82541 - 82810 71 ## + Term 82827 - 82877 9.9 - Term 82811 - 82863 7.1 83 44 Tu 1 . - CDS 82870 - 84201 872 ## COG1316 Transcriptional regulator 84 45 Op 1 3/0.222 - CDS 84375 - 85520 1120 ## COG1960 Acyl-CoA dehydrogenases 85 45 Op 2 29/0.000 - CDS 85513 - 86037 459 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 86 45 Op 3 . - CDS 86034 - 87197 832 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) + Prom 87250 - 87309 2.8 87 46 Tu 1 . + CDS 87338 - 87775 398 ## COG2246 Predicted membrane protein 88 47 Op 1 . - CDS 87776 - 88915 746 ## COG1524 Uncharacterized proteins of the AP superfamily 89 47 Op 2 . - CDS 88916 - 89497 419 ## AARI_20120 hypothetical protein 90 48 Op 1 . + CDS 89550 - 92255 1978 ## COG1042 Acyl-CoA synthetase (NDP forming) 91 48 Op 2 . + CDS 92315 - 94879 2200 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Term 94729 - 94770 1.8 92 49 Op 1 . - CDS 94893 - 95834 481 ## gi|295395842|ref|ZP_06806030.1| conserved hypothetical protein 93 49 Op 2 . - CDS 95877 - 96995 979 ## COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) 94 49 Op 3 . - CDS 96992 - 97780 330 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase + Prom 97741 - 97800 3.4 95 50 Op 1 . + CDS 97844 - 99421 1489 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 96 50 Op 2 . + CDS 99418 - 99609 167 ## gi|295395846|ref|ZP_06806034.1| conserved hypothetical protein - Term 99526 - 99565 4.0 97 51 Tu 1 . - CDS 99610 - 100779 1093 ## COG0477 Permeases of the major facilitator superfamily - Prom 100899 - 100958 1.6 98 52 Tu 1 . + CDS 100856 - 102517 1800 ## COG4805 Uncharacterized protein conserved in bacteria + Term 102545 - 102577 3.1 99 53 Op 1 . - CDS 102527 - 102832 188 ## gi|295395849|ref|ZP_06806037.1| conserved hypothetical protein 100 53 Op 2 . - CDS 102834 - 103625 1026 ## COG4760 Predicted membrane protein - Prom 103648 - 103707 3.5 101 54 Tu 1 . - CDS 103744 - 105318 1773 ## COG2978 Putative p-aminobenzoyl-glutamate transporter - Prom 105362 - 105421 2.4 + Prom 105096 - 105155 1.6 102 55 Tu 1 . + CDS 105272 - 105520 56 ## - Term 105380 - 105431 15.1 103 56 Op 1 . - CDS 105443 - 106525 972 ## PROTEIN SUPPORTED gi|163782670|ref|ZP_02177667.1| 50S ribosomal protein L20 - Prom 106578 - 106637 2.1 - Term 106539 - 106581 2.1 104 56 Op 2 . - CDS 106643 - 108235 1273 ## COG4108 Peptide chain release factor RF-3 105 57 Tu 1 . + CDS 108273 - 108629 299 ## gi|295395854|ref|ZP_06806042.1| ABC superfamily ATP binding cassette transporter permease + Term 108761 - 108805 -0.1 106 58 Tu 1 . - CDS 108597 - 112538 3398 ## COG1643 HrpA-like helicases 107 59 Tu 1 . + CDS 112619 - 113536 224 ## PROTEIN SUPPORTED gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 108 60 Tu 1 . + CDS 113647 - 114759 1093 ## Arth_1203 hypothetical protein + Term 114874 - 114914 0.1 - Term 114767 - 114817 9.1 109 61 Op 1 . - CDS 114828 - 115730 1157 ## COG2326 Uncharacterized conserved protein 110 61 Op 2 . - CDS 115788 - 116360 601 ## gi|295395859|ref|ZP_06806047.1| hypothetical protein HMPREF0183_1545 111 61 Op 3 . - CDS 116387 - 118444 1722 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 112 61 Op 4 17/0.000 - CDS 118441 - 119880 994 ## COG0297 Glycogen synthase 113 61 Op 5 6/0.000 - CDS 119880 - 121178 1150 ## COG0448 ADP-glucose pyrophosphorylase 114 61 Op 6 4/0.056 - CDS 121175 - 123388 1579 ## COG0296 1,4-alpha-glucan branching enzyme 115 62 Tu 1 . - CDS 123516 - 125954 2352 ## COG0058 Glucan phosphorylase - Prom 126004 - 126063 1.7 Predicted protein(s) >gi|294971285|gb|ADNU01000043.1| GENE 1 464 - 700 99 78 aa, chain - ## HITS:1 COG:Cgl1005 KEGG:ns NR:ns ## COG: Cgl1005 COG3093 # Protein_GI_number: 19552255 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Corynebacterium glutamicum # 1 68 20 87 99 100 67.0 5e-22 MKNSASTWHKLSVPIGVPPRRINEIVHGKRAITADTASRLGRYFGVEPQFWLNLQSQYNL EVESEAIADQVKSIDRTR >gi|294971285|gb|ADNU01000043.1| GENE 2 697 - 1053 140 118 aa, chain - ## HITS:1 COG:AGl680 KEGG:ns NR:ns ## COG: AGl680 COG1359 # Protein_GI_number: 15890458 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 89 11 96 100 94 53.0 4e-20 MSTIELNGTLICKDVSDVSSVERFLPKHVELSRDEPGCLRFEVTQSDDPLVWNVSEQSTD QASFDSHQARVKASEWGHATSHIPCDYTIARPEEAEMVDYHRQSPSGSPGRDSDGGIH >gi|294971285|gb|ADNU01000043.1| GENE 3 1299 - 2465 484 388 aa, chain + ## HITS:1 COG:no KEGG:CMS_1759 NR:ns ## KEGG: CMS_1759 # Name: not_defined # Def: hypothetical protein # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 38 383 41 342 349 86 24.0 2e-15 MTTNDAINTSDTPTDKDRQSHHDELHKFVSSNKTSVQLATSYVLECFGRSRRGAIVNRRI NEWLAENQLEMFPDISSADYYGDVEIRRLSSDSEPQTPKPDISSNESASEKSAVGGWVLS SLKSDADELDSLQYGDSVSDAIELMQQRNRTKLPLFFSKNDRSTLIGTVTISDLTFDKVS DQTKLINVATTQVPVVGTNEKLFDWVSTILQHGFIYGKNARNEIVQIYTTWDLATHLNSI AAMFLRANEIEELLRGVLADVPEAKLKKAIAIKKGPLTDVYIDTEQSITLTKEEVDASGP DDSEKSYAQKLTFADYIKAVADDTIWSEVFRVGRISDEDKPRCIRSLNDARLARNRVMHF NRSEIPEDMIPSFEALAVWLRQIMQSKS >gi|294971285|gb|ADNU01000043.1| GENE 4 2691 - 3665 446 324 aa, chain - ## HITS:1 COG:no KEGG:SAV_726 NR:ns ## KEGG: SAV_726 # Name: not_defined # Def: oxidoreductase # Organism: S.avermitilis # Pathway: not_defined # 1 316 1 323 328 194 41.0 3e-48 MDILLLGGTGFLGRHIARVALARRHRVTCLARGTGEPAAGVEFVGSDRDREDAYDKVATR SWDAVVDLTSQPKHARDAATKLQAKHRVFVSSSSVYADQGRISAESDPVVEPLDLDAMES MEQYPAAKSACEAAYRAVSGSVMIVRPGLIAGYGDGTGRSGYYPWRFAHPTGDDVIVPDP KFPIAMIDAEDLADWIVESAEVAREGTFNATGHAATLAEVYTISRDLTASRATARHVPDE ELLAFEVNPWMGPKSLPLWVPGPQWRNIALLECKAAYEAGLHVRPLKETLADAMRYEEER SVERLAGLSDQDEVELRRRLEAGN >gi|294971285|gb|ADNU01000043.1| GENE 5 3799 - 4233 540 144 aa, chain - ## HITS:1 COG:ML1936 KEGG:ns NR:ns ## COG: ML1936 COG0012 # Protein_GI_number: 15828041 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Mycobacterium leprae # 3 141 216 354 356 190 72.0 9e-49 MQAKMRELVAPAEAIFLDAKFEAELIELDPEEAAEMLESTGQDEPGLDKLARVGFDTLGL QTYLTAGPKEARAWTIRKGWAAPEAAGVIHPDFQKGFIKAEIVSFEDLDELGSMAEAKAA GKVRMEGKDYVMADGDVVEFRFNV >gi|294971285|gb|ADNU01000043.1| GENE 6 4371 - 5222 813 283 aa, chain + ## HITS:1 COG:Cgl2726 KEGG:ns NR:ns ## COG: Cgl2726 COG2141 # Protein_GI_number: 19553976 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 280 54 345 347 331 57.0 8e-91 MPLLGAVAATTNHIEVGTGVIDMRYANPLHLAEEAASLYHISGGRVALGVSRGAPEVADR GWEAFGYKGEAPNGADVARAHLEAFMASVDGNGFATAAPLDRQYPNMFHPGSALPVFPMA PELRKHIFYGSGTHTSAEQAAKDRLNLMSSTLISATTAETLGEIQADQISRYRAAWKEAG HDWTPRVSVSRSIFPIVDGADMQLFGMQASGSDQVGTLPDVGASTFGRTYAAVMSADTLL ITIPAGMGVDVNVNILDNFTTHVAPALGWQPNRESPVTGYPIA >gi|294971285|gb|ADNU01000043.1| GENE 7 5305 - 5664 272 119 aa, chain + ## HITS:1 COG:Cgl0882 KEGG:ns NR:ns ## COG: Cgl0882 COG0640 # Protein_GI_number: 19552132 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 112 1 112 119 171 78.0 4e-43 MLTIASRLDVMNRLGRAMADPTRSRILMTLLDGPSYPAVLSRDLDLTRSNVSNHLTCLRD CGIVVAEPEGRKTRYEIADPHLAAALKALVNATLTVDENAPCIDPECSVPGCGEKGAEA >gi|294971285|gb|ADNU01000043.1| GENE 8 5661 - 7553 1422 630 aa, chain + ## HITS:1 COG:MT2048 KEGG:ns NR:ns ## COG: MT2048 COG2217 # Protein_GI_number: 15841474 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 23 629 150 756 771 502 57.0 1e-141 MSSACGCEHEPATEIEDLDRPWWKDPELLLPIFSGVALGIGLALDWAGLETPATILFWVG LLLGAYTFAPGAIRNLVTKRKLGIGLLMTISAVGAVILGFVGEAAALAFLYSIAEALEDK AMDRVQGGLRALLKLVPQTATVLRDGTAVEVAAKDLVVGELMLVRPGERIPTDGIIRSGR SSLDTSAITGESIPEEVAPGDEVPAGAINSAGVLEVETTAAGTDNSLTTLVDLVEQAQAE KGDRARIADRIARPLVPGVMILAVLVGVIGSLLGDPETWITRALVVLVAASPCALAISVP LTVVAAIGAASQFGVVIKSGAAFERLGGIRHLAVDKTGTLTRNQPEVTGVVPAVGFDRAR VLAFAAAVEQQSTHPLAAAIVAAVPEAPDAQDISEEAGHGIGGTVEGRRVLVGSPRWIDA GPLNADVKRMESEGQTCVLVTVDDALAGAIGVRDELRPEVPEAVQTLHANDVKVSMLTGD NTRTARALAEIAGIDDVRAELRPEDKASIVAELSSKTPTAMIGDGINDAPALAGATVGIA MGATGSDAAIESADVAFTGHDLRLIPQALKHARRGSRIINQNIVLSLAIIIVLMPLAISG VLGLAAVVLVHEVAEVIVILNGLRAAQAKR >gi|294971285|gb|ADNU01000043.1| GENE 9 7632 - 8291 190 219 aa, chain - ## HITS:1 COG:Cgl2725 KEGG:ns NR:ns ## COG: Cgl2725 COG2072 # Protein_GI_number: 19553975 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Corynebacterium glutamicum # 10 211 127 372 390 77 28.0 2e-14 MFYLSTSVGQFTAEHVIAATGTWSAPFVPHYPGTFQGRQWHSSTYPGPEPFRGAKVAVVG GANSGAQIAADLIGRSEVTWFTREQPRWMPDDVDGRDLFLRSRRRILGGDSGPNLGDIVA LPHLRELRNSGQLSATPIFDSLSELDHDHLIWCTGFRPALGPFRHLMRGREPAVQNLHLV GYGNWTGDGSATLMGVGPFAKHTAQVVAGRVDKARHQKF >gi|294971285|gb|ADNU01000043.1| GENE 10 8821 - 9081 68 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300933528|ref|ZP_07148784.1| ## NR: gi|300933528|ref|ZP_07148784.1| hypothetical protein CresD4_05617 [Corynebacterium resistens DSM 45100] # 44 86 1 43 43 71 88.0 2e-11 MTQTLQPRYALAHVDDPGAHLDVIGGGRDSTQQRHRGGGLQREVVDSEGRVVHADFVRSL GDLQMSLGDLFRRSPALAAESVMPGA >gi|294971285|gb|ADNU01000043.1| GENE 11 9095 - 9484 344 129 aa, chain - ## HITS:1 COG:MT3438 KEGG:ns NR:ns ## COG: MT3438 COG0789 # Protein_GI_number: 15842931 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 1 126 1 126 146 125 51.0 3e-29 MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPEMVARIDFVHRGQAAGLTL AQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETC STDQVCRYL >gi|294971285|gb|ADNU01000043.1| GENE 12 9583 - 11004 456 473 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 3 461 2 450 458 180 29 3e-44 MPTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGAR HVAVDAATRFPGIATTADPVDMPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFV GTPDAPVLDVARADGSVETIEAHHYLVATGSRPWAPPIDGLEETGYLTSTTAMELTEVPE SLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRA VPTRVSRGTGGEAVVTAAVSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVNTGDSGEVV VSDRLQSSNPRIWAAGDVTGHPEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGP AIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRGFIKIVVNAETYEILGLTAVA KDAGELAAAGVHVLGRTVAEVANAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA >gi|294971285|gb|ADNU01000043.1| GENE 13 11054 - 11221 87 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395764|ref|ZP_06805952.1| ## NR: gi|295395764|ref|ZP_06805952.1| hypothetical protein HMPREF0183_1450 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1450 [Brevibacterium mcbrellneri ATCC 49030] # 1 55 4 58 58 68 100.0 1e-10 MSADQDRDEGRAGPVVAAGTGLLLLACCALPSLLCCGLPFIAAGGAGRNRRSAQG >gi|294971285|gb|ADNU01000043.1| GENE 14 11253 - 11618 210 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227487866|ref|ZP_03918182.1| ## NR: gi|227487866|ref|ZP_03918182.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] # 1 119 293 411 440 173 89.0 3e-42 MDSAIRDAAKLSNQVWVTSPIRAHHITAHANSIHDIINAFAQHVRMNVEDAERLQVQGRR QSVMSRAGDTVNAANRARQSAVEQAQKATEKIRDMNEDRLLAKAAEIEARREKEEQKALR G >gi|294971285|gb|ADNU01000043.1| GENE 15 11704 - 12096 148 130 aa, chain + ## HITS:1 COG:no KEGG:jk1443 NR:ns ## KEGG: jk1443 # Name: not_defined # Def: hypothetical protein # Organism: C.jeikeium # Pathway: not_defined # 4 90 1 86 86 144 95.0 8e-34 MNDLTIAPGPGIPDGAVIAAADLAERFAKSSAPGGQGVNTTDGKVQLSIDVAEYASLTDA QRHRISRNLEHRLDGSVFTVTASTQRSVFRSWSPRLHLRHSLVPPGRSIRGSTIAPVLIT SRDQRVHRRG >gi|294971285|gb|ADNU01000043.1| GENE 16 12100 - 13266 1487 388 aa, chain - ## HITS:1 COG:Cgl1003 KEGG:ns NR:ns ## COG: Cgl1003 COG0012 # Protein_GI_number: 19552253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Corynebacterium glutamicum # 28 388 1 361 361 453 69.0 1e-127 MHSRPSHQGRWTSAVEPSVRNRLDLHPVALTIGIVGLPNVGKSTMFNALTRAEVLAANYP FATIDPNVGVVPLPDPRLNRLAEIFGSEKILPATVSFVDIAGIVKGASEGEGLGNKFLAN IREADAICQVTRAFSDPDVTRVEGSKDPAGDMDTISTELILADLQTLENARPRIEKEVKR KAVEPDVLAAMDQAKELLEGGTTLFQGAEKAGIDVDQLKELQLMTAKPFIYVFNTDEDGL ADEAMQSKMRELVAPAEAIFLDAKFEAELIELDPEEAAEMLESTGQDEPGLDKLARVGFD TLGLQTYLTAGPKEARAWTIRKGWTAPEAAGVIHTDFQKGFIKAEIVSFEDLDELGSMAE AKAAGKVRMEGKDYVMADGDVVEFRFNV >gi|294971285|gb|ADNU01000043.1| GENE 17 13214 - 14377 371 387 aa, chain - ## HITS:1 COG:Cgl2743 KEGG:ns NR:ns ## COG: Cgl2743 COG4924 # Protein_GI_number: 19553993 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 29 376 28 362 368 137 31.0 3e-32 MRGVEEARSTLRERLQRNMSGWVASPDSFLPIKFALHPPTEKQAIVDQQAAIDWVVQWRH VSDKPEFAGAVTWEERAWSRVGRQSVPVRFVLKDAEVVARFVGGEPASRFRRMKDRATCI REVCGDSATVAGAIRANGQRLVGLNDEDFGRVLEVVTWLGDNPVGQLRPRQLPIRGVDSK WFSTHKTAVTALLKAYGREDAVSVLEPEPRLHVRFLDPQLAPCEALCDVTAPVDELACME IEPETVFVFENLESVLSMPRCAGAVVIHGGGYSVDLLARLPWLRNARVVYWGDLDSHGFA ILAKFRKQVPGAVSILMDVETLVAHRDLWVEEPKPHTGSVAGLTSSEERALARVRAEGNV RLEQERIPWKNALEAIAPRALDQCGRT >gi|294971285|gb|ADNU01000043.1| GENE 18 14364 - 17687 2003 1107 aa, chain - ## HITS:1 COG:Cgl2744 KEGG:ns NR:ns ## COG: Cgl2744 COG4913 # Protein_GI_number: 19553994 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 7 1096 12 1107 1111 520 33.0 1e-147 MSEHAEPRQWRLAQVQLANWGTFDKQISIVNIARKGHLITGPSGSGKSSLLDAIACVLTP DKWLRFNLAAQGSTSRSDQRSLVSYVRGAWTRVTDDDQDRVVSKYLRPSSTWSGIVLRFH DGEGKTLSLARLFFLKGSSVSARDLGDICVLEETELDLIDLQKYAAGGLETKKLKADHPA AIVTSNGTHTKFYARLRRAFGIENESALQLLHRTQSAKSLDNLDRLFRDFMLPVPDTFEI ADTAVQQFGDLRDAHAHVVELRKQRDLLLKLRTASEEYDTCWAKHVDLNTLNDLLSPFLK RRELAMLNEQQQHLRRTLAQKRAQLEENRAEEGRAESELDTATRVVRQSGGAEVEVLQAT LDGARNDHSATENRRRRFEAQLQSVGIMRMPQTADEFAELHTEIAAETKSQEQSVGASYE DNDRLAKARRDVREIEAQIRTLRQSGSTVPDNLQRVRQAIATRIGIPAESMPFAAELIEV KPHFKEWTGAIERVLRPFALTMLVRSQYLPAVREWVDNNEIRGRLVYEEVADGIERPQPV LHRDSLINRIEIADSAVGAWVSWALSVRYNYVCVETPDDLGDHSRAVTIRGQMKTSATRY EKDDRRGINDRSHWVLGDRAGKLSALADRLKEAQEEFNAAQEVVDAATRQEQERNIRRGR LESILDGSWAEYDTVSSQKKVDSIEQRLRTLTSGDATLSRAVQAEQKAKAAYDAARSATE DTRHEVRMAERDLAVCEEKAGEIKARIAAGELEDVPEDTATRLEERLRREKRAIRLDNIH EVGQRVSTALQKEKDTARDAADRASHQVTQLTTEFKERWEAVASDLMPGVEDRAGFLRIL DEILTNGLPTYETRFRKLLQERSQDLVGELLNEIMSAPNEIRDRVVPINSALARKPFDEA RFLHLRVKTQRSAVVEDFMGQLRTIVDGSWDDQDMQTAESKYAVLAEIMRRFDSGEHVDK AWRNQCLDTRTHVKFLADEVDEHGTVRATYDSGAAMSGGQQQKLVVFCLAAALRYQLAQR DDDVPLYGTVILDEAFDKADTRYTRMALDIFVEFGFHLVLATPQKLLQTIEPYVGAVTEI DNPTRQLSTVANIDWSGHTAGDSDARS >gi|294971285|gb|ADNU01000043.1| GENE 19 17684 - 18304 509 206 aa, chain - ## HITS:1 COG:no KEGG:Mlut_22900 NR:ns ## KEGG: Mlut_22900 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 10 193 26 209 226 199 53.0 5e-50 MSEDTVDGGLWNGDEGQLAFDTRRVLLELLKGPYVSGEQKPQLWAALVADEGLIRSRLND VFVDLVIDHSASFAFTRRVVTNEIQAPVALRAENLKFLDTAMLLVLRQRLLAAQGVRRVI VDQSEIYEQLSVFRTGDETTFQRNLNASWRRMINTVRVLHKASEDRYEISPIVRFLVDED RVKELTETYERIARENQKSKKQGEAQ >gi|294971285|gb|ADNU01000043.1| GENE 20 18301 - 19764 959 487 aa, chain - ## HITS:1 COG:no KEGG:Mlut_22890 NR:ns ## KEGG: Mlut_22890 # Name: not_defined # Def: methyl-accepting chemotaxis protein # Organism: M.luteus # Pathway: not_defined # 1 485 1 486 487 381 49.0 1e-104 MRVLSSALAFKRLMESDSALGMLRADNLPIMAAILGAHLGKPGAVMPTDELHERIEADLE ELRDYFDTGDKRGKAFCDDWRRKGILVRRPATAVRGEIYELSAAGFDAIRILDQLRTPPQ TTTQSRLVSLSQAVHNLALETDPDQSRRLGQLEAEKRRIEQQIELIHRGDGDTTMLDNRM ARERVSDILQQAAGLPGDFARVRARFEELNHELRVSILESDESQSRVLDEIFRGVDLIAS SDEGRTFAAFATLLREPEHAASFDEDISRILDRDFALQLNRDERQALRLLMRHMKTGARD VQQTLSEFTRGLRNYVFSREFQTDRVLLALTREAMSQAASITDVCKPTADIGITLELPSV RMTSVGEIQLHDPDEYIIGDELGVAEATEVDYRALVALARESEIDIVELVGNVNAAVEEG RPVTVAEVLSQFPATQGVASVVGLVSLAVNHGESVPGESDTLEWVGLDDVARSATVARWH FTERIRA >gi|294971285|gb|ADNU01000043.1| GENE 21 19868 - 21019 566 383 aa, chain + ## HITS:1 COG:Cgl2446 KEGG:ns NR:ns ## COG: Cgl2446 COG2508 # Protein_GI_number: 19553696 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Corynebacterium glutamicum # 34 374 48 390 394 107 25.0 5e-23 MVTSAIRERIAQQLRTHKDTLLPVIIDYVRKECPLYIDVTDREIEESLEQNIEMCIRAGV TRTGNSDSHFLNWAQISRSRFEKSVPMEEIFQTYRFSIELIVAELIVLLNDSGCTASEQT SAITKVWQSANAYTVKLAQVYNHHQHMQASQDQAQKAILFDAIKSGAQLDHHVCQAADFF QLNDRTPYSYFIVAIPKGSTLPAHEVLRTLESRLTNGRGVCMATGSTIEGFSTDAISFPH TSIAIGPPRTLSELHYSYNVAHQISRTSVGQKLGTHFISDVGWRVAVLSHPEVLLPYKEK YVTPLERSGADVSTLLTSLEAYLAHDAHATDAARILHCHPNTLRYRITRFEELTSCSVDH SETRVELAWLFEALKVHELHQLS >gi|294971285|gb|ADNU01000043.1| GENE 22 21130 - 21591 273 153 aa, chain + ## HITS:1 COG:HI0772 KEGG:ns NR:ns ## COG: HI0772 COG2031 # Protein_GI_number: 16272713 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Haemophilus influenzae # 4 127 5 128 447 89 39.0 2e-18 MRTLSRSLNILVEKHLPSAFLFALILTIIAAAMGVFLGGVSVPEVANMWYAGFWNFLEFG MQMVVVLVTGYALAKAPLVNRLLAKFATIPKTQFAALTVVMVVSAILGIISWGLGFVGGT IIAIEVASAHRQLISASWSPRHTQRSSLRSPCL >gi|294971285|gb|ADNU01000043.1| GENE 23 21582 - 22451 889 289 aa, chain + ## HITS:1 COG:BH0358 KEGG:ns NR:ns ## COG: BH0358 COG2031 # Protein_GI_number: 15612921 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Bacillus halodurans # 3 284 153 441 441 197 39.0 1e-50 MSLALTAPLLVNTPGHPLEEKIGLIPVTETIFSPTMLLVSIVGFLGIYAGFAFMAPKPNE IIPLNGDIAEPPADPKPQTAAEKIDNSIIVNTIVVVFGILAISLYFIANGFNLELNIMNF IFLVVGIGLHGSPAKYAKCITDGIPAASGIVLQFPFYAGIIGIMAGSGLIVMIGQWFASI STEATFPLFTYIAAMIVNIFVPSAGGQWQVQGPVMIEAIQNMNINPATIVNAVSVGDMTT NLLQPFFVLPTLGLAKLGLKDIWGYCMTAMLILMVISGTFFLLVPVLGW >gi|294971285|gb|ADNU01000043.1| GENE 24 22457 - 24445 1333 662 aa, chain + ## HITS:1 COG:PA1997 KEGG:ns NR:ns ## COG: PA1997 COG0365 # Protein_GI_number: 15597193 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Pseudomonas aeruginosa # 6 654 2 647 651 447 38.0 1e-125 MTDNTPTQFWSPTQESIDRSQLARFTRFLNDSYDTAFDLGDYQALHTWSVEHSDRFWSAV WEYFDVRGQRSETPVTQTVSDTETTWFSGSQINYAENILRWTHERPDSPALIGLHETAQR EEISWKELAGQVGALAQHFRSRGVRPGDVVCAVLPNTPQTVVALLATASVGAIWTVVNTD FGTHGVKERFEQLQPKVLLTTDSVHFGGKVVDKTPQLPELLEALPTVEHHVLVDTDVDSD ETLPAASARLSDILASPQEPDFTRVEFNSPLWVLYSSGTTGKPKGIVHSHGGVVLESLKA NALQYDVRTGDRTHFAASTTWVIWNMMIATLFVGATVVTYDGSPAHPDALQHLKIVSEEQ VAFFGTGAAVLTMGEKSGLSHAHNWDFSHLRFVLSSGSALPPTTWKWLRKQIGTDFHLGS DSGGTDIATGIIGSNPWDKQNVGELQGPYLGVDARSIGPDQETVTDEVGELIIANRIPSM PIYLWGDTDRSRYTETYFSTYKGIWRQGDWVTNTSAGGWIVHGRSDSTINRGGVRMGSAD ICRVVDEVDGVTSSMVIGAELKNGGYYMPLFVVTTRDEAEHDELEKEIVAAIRQKVSPRY VPDAVIFAPDVPLTRTGKLMEVPVKRLFQGASPDSLNRTASQNPEVLDWYSEQATKFAQS ED >gi|294971285|gb|ADNU01000043.1| GENE 25 24499 - 25644 949 381 aa, chain + ## HITS:1 COG:CPn0982 KEGG:ns NR:ns ## COG: CPn0982 COG1322 # Protein_GI_number: 15618890 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Chlamydophila pneumoniae CWL029 # 71 336 100 367 411 171 33.0 3e-42 MSISVVAVVFAALILGLVAGAVLGLLAGSARARSRYSVELAQAQTKTELLTERTANLEAD AAIAAELTAAVGPLAASVRDLKAHMHKQDHERIDQIARLSENITSLTQQNARLHASTTQL SNALHSTSARGDWGEVQLKRIVEYSGLLPHVDFDTQVSTQHGRPDMVVHLPGGGTIVVDA KVPLSSRLSENNKESAKQHAQALLRHVDALASKTYWKSFDQSPEFVVCFIPTDGLLSHAA ATYPALIEQALSKNVVIASPSTLLVLLKTVALNWRHYNISTSAAQVLKLGTELYERTGLL TERLTKLGTALDRATQEYNSFIGSFETRFLVTARKLTHTGITNTQLDELNGITTPTRNIT AQELAYPTSPETLPQHRDTGT >gi|294971285|gb|ADNU01000043.1| GENE 26 25736 - 26248 565 170 aa, chain - ## HITS:1 COG:Cgl2474 KEGG:ns NR:ns ## COG: Cgl2474 COG1528 # Protein_GI_number: 19553724 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Corynebacterium glutamicum # 1 163 1 162 162 160 53.0 2e-39 MKLADALEAKFNEQITLEFEASMTYRQLAVVADVQSFPGMAQWLRAQADEEIVHANKFID HVVDRGGHVQIGDIPAPKVGVDVKPLDLFKAALAHEQKVSEAIRELYRAADAQGDLDSRP LLNWFLDEQIEEEATVGEIVDQLVLAGDDGNGLLRLDAELGSRTSSGTEA >gi|294971285|gb|ADNU01000043.1| GENE 27 26285 - 27346 442 353 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 24 305 2 276 632 174 35 1e-42 MPMPSMPRTRKAPEDIEQPDGEKKVLLAAPRGYCAGVDRAVIAVERALEHYGAPVYVRKE IVHNRHVVETLTERGAIFVEETDQVPHGERVVFSAHGVSPAVHEEAAERDLKTIDATCPL VTKVHREAVRFAKQGYTILLVGHEGHEEVEGTMGEAPESIVLVQDPAEAREVDLGNPEKL VWISQTTLSVDETMETVSILRERFPQLIDPPSDDICYATQNRQVAVKKIAPQCDLVIVVG SNNSSNTKRLVEVALDHGAKSSYRVDFAREIDEDWFNGVATVGVTSGASVPDLLVKSVLE LLAEYGYADVEEVRTAEEDLMFSLPRELRADLKAAGENTSNKKNGANREHDLR >gi|294971285|gb|ADNU01000043.1| GENE 28 27444 - 28757 1058 437 aa, chain + ## HITS:1 COG:Cgl0996 KEGG:ns NR:ns ## COG: Cgl0996 COG1570 # Protein_GI_number: 19552246 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Corynebacterium glutamicum # 26 418 9 408 417 348 51.0 1e-95 MAPRISGTPGTVGGEPPSSLPATALETTPENPWPVSLLSKNIKRYIERMSVVWVEGQIIE FNSRGRASYLTIRDLNDQISLPVQVFSDVLDRLETPVKAGDHVVVQLKANFWMKIGRLSM QARDIRPVGLGELLARLERLKRLLAAEGLFDPALKKPIPFLPTKIGLITGRNSDAEKDVI RNATLRWPSVEFDVINTAVQGTGAVTQIIAALDQLDARPDVDVIIIARGGGSLEDLLPFS NESLIRAVAAAKTPIVSAIGHEADRPILDEVADLRASTPTDAAKRVVPDFYQEVMDIMQA RAVMTGILERFITNEQKGLDSVRSRPVLANPHTIIATRAEEIADWRARAASLTKRILQHG NSTVEHLRTQIRALSPLNTLARGYAIVQDTSGTAVRNTQDLSTGDKLTVTVEQGTFDATV TKIHPHRQTTPRSKDTP >gi|294971285|gb|ADNU01000043.1| GENE 29 28754 - 28990 410 78 aa, chain + ## HITS:1 COG:no KEGG:Mlut_16330 NR:ns ## KEGG: Mlut_16330 # Name: not_defined # Def: exodeoxyribonuclease VII small subunit # Organism: M.luteus # Pathway: Mismatch repair [PATH:mlu03430] # 1 66 26 91 95 66 62.0 4e-10 MTQINDMSYEQAREELMNTVKALEAGNLNLEESLTLWKRGELLADRCQAWLDSAREALDK AQAKQAGENETSSEQEAE >gi|294971285|gb|ADNU01000043.1| GENE 30 29027 - 29593 611 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395781|ref|ZP_06805969.1| ## NR: gi|295395781|ref|ZP_06805969.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 188 1 188 188 350 100.0 2e-95 MTEKSAQTQPGSRAEMRKLRLEANWMNMVIALLACVLIMVLALMIAPQPKGDPIRKVDAQ GIGQTADETVDWPVAWFETPQDWHSNEARLGPMGEPSVETWYASYVGPDEQWLSIRQAQA EEDWAKSFVKEFAPVGEQNIQGVKFATYEGKNREQAFVGQANGTWLVVQAVATAESVDMF VGRALEKH >gi|294971285|gb|ADNU01000043.1| GENE 31 29710 - 30828 1117 372 aa, chain + ## HITS:1 COG:MT1131 KEGG:ns NR:ns ## COG: MT1131 COG1494 # Protein_GI_number: 15840538 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Mycobacterium tuberculosis CDC1551 # 46 359 1 312 328 359 61.0 6e-99 MTELNASQEKAHHNGGRAETEPVAVTDEWSQRLRTEEGEPDRNLALELVRVTEAAAIAAG PWAGRGEKLAADGAAVAAMRNVISTVRMDGTVVIGEGEKDEAPMLFNGEKVGDGTGAHVD VAVDPIDGTTLTAKGMPGAIAVMAVSEGGSMYDPSAVFYMEKLVAGDQYADVVDLRLPVS ENIRRVAKVKGSTDDASAVTVVILDRPRHKELIQEVRDAGARIKLISDGDVAGAIAACRP NTGTDLLMGIGGTPEGIITACAVKAMGGVIQGRLWPQSDEERQGAIDAGLKLDTVLSTDD LVKSDNTYFVATGITTGDLLDGVRYEGQHVMTHSLVMRSKSGTVRNVYAEHRIEKTHSYE EAAREAARRGLV >gi|294971285|gb|ADNU01000043.1| GENE 32 30828 - 31475 668 215 aa, chain + ## HITS:1 COG:MT3694 KEGG:ns NR:ns ## COG: MT3694 COG0288 # Protein_GI_number: 15843201 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Mycobacterium tuberculosis CDC1551 # 1 197 1 193 207 177 48.0 2e-44 MPNSRTYNTPQAAFDRLIDGNKRFVTDTPEHAQQDATRRRELRTSQLPFSTLFGCSDSRV AAELIFDVGLGEMFVVRTAGQVTDSVTIGSLEYGVEQLGTPLVIVLGHDSCGAVTASVDA YQNGTFPGGFVDDVVSNILPAVARAHSQGKSDIGAAVEQNTVDTVERLYARSYTIRKAVN EGRTALVGLTYALADGKVNVVAVRGELNTDSKEAQ >gi|294971285|gb|ADNU01000043.1| GENE 33 31472 - 32878 1638 468 aa, chain + ## HITS:1 COG:Cgl0981 KEGG:ns NR:ns ## COG: Cgl0981 COG0114 # Protein_GI_number: 19552231 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Corynebacterium glutamicum # 3 462 4 460 469 543 63.0 1e-154 MSQEFRIEHDTMGEVKVPVNALYRAQTQRAVENFPISGKPLEAANIAALGHVKKACARAN NDLGVLDDTRAKAIIAAAEEVIAGTHNGEFPIDVFQTGSGTSSNMNTNEVIATLANRTVE GQDTEIHPNDHVNASQSSNDVYPTSVHVAVTQALVNDLVPAMDYLASALEEKATEFRNIV KSGRTHLMDATPVTLGQEFSGYAAQVRYGIERIEASLPRVAEVPMGGTATGTGINTPKGF PQAVVKYLAEQTGLPITEARNHFEAQANRDGLVEASGQLRNIAYSYMKINNDIRWMGSGP NTGLGELHIPDLQPGSSIMPGKVNPVICEAVIQVCAQVVGNDTAVSLSSTNGAFELNVGI PVMASNLLESIRLLANSSRVMADKMIKGLEANEERCRFLAEASPSIVTPLNKVIGYEAAA KIAKHAVNNKMTVKEATVELGYVENGTITEEDLDKALDVTTMLGEFNR >gi|294971285|gb|ADNU01000043.1| GENE 34 32970 - 34292 1089 440 aa, chain - ## HITS:1 COG:Cgl0065 KEGG:ns NR:ns ## COG: Cgl0065 COG1875 # Protein_GI_number: 19551315 # Func_class: T Signal transduction mechanisms # Function: Predicted ATPase related to phosphate starvation-inducible protein PhoH # Organism: Corynebacterium glutamicum # 7 434 33 454 458 531 64.0 1e-150 MTTTVHTYVLDTSVLLSDPRAIYRFDEHDVVIPLIVVSELEAKRHHPELGFTARRALGIL DDLREEFGRLDAPIPIGSEGGTLRVELNHVDASGLPVAFDRGENDTRILAVARNLQAEGH SVVVVTKDVPMRVKASALGLAAEAYLAEQAVDSGYTGLSELMLDEAEMAQLFDSGFVETK AAGAEVLNTGLVLSSSRGSGLGRVVALNEQAGTGTIKLVRGDRDVFGIHGRSAEQRIALD MLTDEEVGIVSLGGRAGTGKSAMALMAGLQAVLEDRTHEKIMVFRPLYAVGGQNLGYLPG DESDKMNPWAEAVFDTLGALVSRNVIDEVIHRGMLEVLPLTHIRGRSLHDAFVIVDEAQS LERTVLLTVLSRLGQNSRVVLTHDVAQRDNLRVGRHDGISAVIEKLKGYKLFAHITLTRS ERSAIAALVTQVLEEFDMHT >gi|294971285|gb|ADNU01000043.1| GENE 35 34466 - 35239 665 257 aa, chain - ## HITS:1 COG:ML2467 KEGG:ns NR:ns ## COG: ML2467 COG0020 # Protein_GI_number: 15828335 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Mycobacterium leprae # 9 257 12 262 262 266 55.0 2e-71 MRRQIAGWLYRLYNRQIVRELAPSDRIPRHVGVITDGNRRWAKEFGATTEQGHRAGAQKI VEFLGWCDEIGIEVVTLYVLSRENLQRTPEEVETLVAIISDMVEQIAQSDTYAVNLVGDL SVLPEPLRARLENAQERSRGGQPSVHVNVAVGYGGRQEIVNAIKSYLRAESAAGTSMEDA INALTEERLAEHLYTKGQPDPDLIIRSSGEQRLSGFLIWQSAYSEFFFCEAYWPAFRKTD FLRAVRDYSQRQRRYGK >gi|294971285|gb|ADNU01000043.1| GENE 36 35327 - 36094 701 255 aa, chain + ## HITS:1 COG:MT1117 KEGG:ns NR:ns ## COG: MT1117 COG1272 # Protein_GI_number: 15840522 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Mycobacterium tuberculosis CDC1551 # 48 247 33 237 242 124 35.0 2e-28 MGAQDTLDPVSDSKRDKKRDRKLAAAKSQHARRLRNLRVDVTRFMEIRPSWRGWIHAGAF PLAVVGGLAAVILCPTVASRLASAIFAITGMMLFGTSAMYHRGSWRVRVRILLRRLDHAN IFLITAGTYTPLAVLLLDPPASWWLLGIIWTGAILGVVFRLIWISAPRWLFVPVYIGIGI AGIGFIPSMWMHNLAAGILIVIGGASYVTGAVIYALKRPNPFPAQFGFHEIFHTATVIGY GCHLAAILVSAVAAL >gi|294971285|gb|ADNU01000043.1| GENE 37 36130 - 36432 407 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395788|ref|ZP_06805976.1| ## NR: gi|295395788|ref|ZP_06805976.1| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase [Brevibacterium mcbrellneri ATCC 49030] nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase [Brevibacterium mcbrellneri ATCC 49030] # 1 100 1 100 100 158 100.0 1e-37 MTAMAITTIAMWAATAPPTKKPIPDEELVTPGTIGFLITLAVVIAGIVLANLAARKVRRL RARDGAVESNVLPVRVDPRQSREEAEAILEQKQRNQQDES >gi|294971285|gb|ADNU01000043.1| GENE 38 36429 - 37385 776 318 aa, chain - ## HITS:1 COG:MT1113 KEGG:ns NR:ns ## COG: MT1113 COG2120 # Protein_GI_number: 15840518 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Mycobacterium tuberculosis CDC1551 # 3 293 2 286 288 252 48.0 6e-67 MYSALRLLAVHAHPDDESSKGAATTALYTSLGAQVLIATMTGGEAGDILNPALADSPAAE RDIAELRRREMATAASILGADHQWVGFVDSGLPDGDFETQVPHGCFYRVPAHVAARPLVN IIRRFKPHVITTYDELGGYPHPDHIHTHTVTMAAIQAAADDAEHPELGEPWNVQKVYYNQ DLSPAKWMRVHALLEEKGLESPLAGMVKKYNERPARETWLTARIESQEFMDTARRALLAH ATQIDPNGGFFSDIRKLASEYWPTEEFELAIDNTGRGLDPRADFVESDLFAGVTLEDGTV IGEDELRKVRAQRSGEQS >gi|294971285|gb|ADNU01000043.1| GENE 39 37463 - 37858 350 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395790|ref|ZP_06805978.1| ## NR: gi|295395790|ref|ZP_06805978.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 131 1 131 131 245 100.0 7e-64 MESLDSRYGRQGVNKRPLLLALACVVVILIAGAAFLAFKPRTNPHAPETSHFTAHDAANA SVAFSIVPDAQRDVRCAAVIRNQYEAVVGYKEVTIPADPQATSASMYHDSVDIRTTQKGA QGNVESCAFVG >gi|294971285|gb|ADNU01000043.1| GENE 40 37960 - 38451 679 163 aa, chain + ## HITS:1 COG:MT1111 KEGG:ns NR:ns ## COG: MT1111 COG0782 # Protein_GI_number: 15840516 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycobacterium tuberculosis CDC1551 # 10 163 7 162 164 111 43.0 7e-25 MTAENTADQTWLTPQAFERLTKELEHLSGPGRTEIAERIESARDEGDLKENGGYHAAREE QGKLEARIRELEHLLQNANVSEPDGDESTVTPGKLVTLKMGRRKIEFLLGSREIISEEDH VDVFSEKSPLGAAVNGKKVGDKVEYEAPNGRMIEVTIESAKAY >gi|294971285|gb|ADNU01000043.1| GENE 41 38511 - 39908 1347 465 aa, chain - ## HITS:1 COG:MT0215 KEGG:ns NR:ns ## COG: MT0215 COG0628 # Protein_GI_number: 15839585 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Mycobacterium tuberculosis CDC1551 # 65 410 10 352 367 228 40.0 2e-59 MNKSDGKLFVMNSKSRRNPILGRWLRNVNKVREEEPQPTQAISLDDFNDREIEQAREESQ KPPYVSPGLKLAAAWSWRSLIVIAAVAVAFWGLSKVSILVLPCLIALLLAALMAPAVSFL DRHKWPHTLSVITTFLGFILVVLGLLAFTGQQIVVGFPALAHQVVLGVNKLNAFVQNNPF GIDSTVITSYLDELSGKALDWLQKSQGKIASGALGAASSIGNFVTGLLITLFASFFFLYD GGRIFQWFVRLLPKPAQPKSVAAAVNGWSTLVQYVRVQVLVAGIDAVGIGIGAFALGIPL AFPLTVLVFLASFIPLVGAVLTGVIAVLVALVSKGLVTAIIMLIVVVGVQQLEGNVLQPF LMGKAVAVHPLAVVLAVTGGGVLYGIPGALFAVPFVAMLNTVVLTLSGNPEYMKKANEAL VKIKGDSEALTKAKEATSEHVEAQKSKQHVEAGAPQQGTQTTSEK >gi|294971285|gb|ADNU01000043.1| GENE 42 39921 - 40793 576 290 aa, chain + ## HITS:1 COG:no KEGG:SCO3078 NR:ns ## KEGG: SCO3078 # Name: SCE25.19 # Def: secreted protein # Organism: S.coelicolor # Pathway: not_defined # 53 276 51 270 340 77 31.0 6e-13 MKASTKLLVTSLTLPLIAGAGAAMLRMQSNRMRALFERDLTLPGEDIAMTIGPDDTSAEA GTTSAPLDTHSEDLPALAVIGDSWIAGTGPGAPSPAALMGRGLSTLLGQRVRVRACTQPG ARGEEMSAQIATVLADSRMRRSRSGSTAPRFAVISMGSADLVRPSVTHSGVAVFSSALNR LEREGGYRVVVLTCPNLGLLPGVRRPLRTILRRSSRVVSGSQWLMAVSSHALPISLNQVL SGTAQVGLLADSRRSPSPLGYKQIVAAVLARISADLESQVLSTPDSEEQK >gi|294971285|gb|ADNU01000043.1| GENE 43 40790 - 41464 567 224 aa, chain + ## HITS:1 COG:MT3381 KEGG:ns NR:ns ## COG: MT3381 COG0424 # Protein_GI_number: 15842873 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Mycobacterium tuberculosis CDC1551 # 7 219 5 210 222 131 39.0 1e-30 MNTIVTVLASSSPSRLSLLRQAGIEPVVIRPQVDENAVVEEVSPQSVIDEVALLAQTKAH AVITALAQDPHEDLVGTADTCVLIACDSLLELNGESVGKPGNAQATAEVWKRLRGKSAVL HTGHCIALLRRGRAGWDLIDQADAVGSTTLHTADISEEEIAAYCKTGEPFHVAGALTIDG YGAAFVKSLEGDHTNVIGLSIPLARTLVTGLGISWPKLWKITST >gi|294971285|gb|ADNU01000043.1| GENE 44 41550 - 43292 1408 580 aa, chain + ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 4 580 7 591 591 540 49.0 1e-153 MSAQFSKVLIANRGEIALRIVRACRDLGLQSVAVYTSAESNADFVRFADDAWLLPGTGAA TTYLDMRALIDIAHRSGAQAIHPGYGYLAESPEFARAVTEAGLTWIGPAPDALEALGDKA GARAVAEAVGAPITPGSGRAVKDIEDALAIADSIGYPVAVKAVHGGGGRGFRTAANREDL PTALESASREAVAAFGRGECLLEKQIVRPRHIETQCLADSHGNVVVVSTRDCSLQRRHQK VVEEAPAPFLSDEQNQVLVEASKKILSHVGYVGAATCEFLLGQDGTITFMEANARIQVEH TITEEVTGVDLVAWQLKIARGEQLPSSLPAPRGHAFQFRINAENPANRFIPATGRIVELH EPAGPGIRMDSGVKEGTVVGTDFDPMLAKLIVTGEDREQALARARRALDEYVLQGVATLL PLHRELVRTPAFTTDFSVYTLWLEQEFMPSFSAPQELTAETSPEDTTTDVVVEVDGHRLT VKVPASLTTGGQQTKVKPPRRRKTTRIAANSGDLTAPMQGTIVAVDVQPGDTVNEGDRLA VIEAMKMEQPLTATRTATVSEVCVEAGSAVKSGAPLVKFQ >gi|294971285|gb|ADNU01000043.1| GENE 45 43312 - 44742 569 476 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 8 464 2 447 458 223 29 3e-57 MKNVLDPSQNRVVIIGGGPGGYEAALVAARSGADVMLIEKNRTGGSAVLTDVVPSKSLIA TAEVMVEFTESSQLGLRVGEGEADLDGQVWVDLEAMNRRIMKLANAQASDIHDSLVSEGV KVITGAGRLTSASEVHVTETNGTEYELTADTVLIAVGAHPRELQSAMPDGERILSWTQLY DLKELPEHLVVVGSGVTGAEFASAYNALGSEVTLVSSRDRVLPGQDEDAAEVIESAFRRR GMNVLSRSRADSVTRTEDGVEVVLADGRKVRASHCLMAVGSIPNTADLGLEAAGVHLEDS GHIIVDGVSRTSVPGIYAAGDCTSVFPLASVAAMQGRIAMWHALGDAVAPLKLRNVASNV FTAPEIATVGFTQADLATAGHDVEWSMVSLATNPRAKMQGNEEGFIKVFARRGSGSVLGG VVVGPKASELITPIALAVENRLTVDQLSSTFMVYPSVSGSLSEATRRLHHRREFRE >gi|294971285|gb|ADNU01000043.1| GENE 46 44988 - 45236 199 82 aa, chain + ## HITS:1 COG:no KEGG:Celf_2534 NR:ns ## KEGG: Celf_2534 # Name: not_defined # Def: transcription factor WhiB # Organism: C.fimi # Pathway: not_defined # 1 82 1 82 82 139 86.0 3e-32 MDWRHRAACLNEDPELFFPIGNTGPALLQIEEAKSVCHRCEVAETCLQWALETGQDAGVW GGLSEDERRALKRRAARARRAG >gi|294971285|gb|ADNU01000043.1| GENE 47 45292 - 46758 1189 488 aa, chain - ## HITS:1 COG:ML0803 KEGG:ns NR:ns ## COG: ML0803 COG3920 # Protein_GI_number: 15827350 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 1 484 1 492 500 302 39.0 1e-81 MSAFADLLHSKGITDEDDIEWLHLLVEDWQMIADLAFSDLVLWVKEGDTFTVVAHCRPNT GSTVYPHDEIGTVANDAERSLISDAMESAQTRQYGSEEGMLQGAEAVPVVRECSVIAVLT IHSDVERKANYSRMERNYRSAGVMLLSMIAEGYFPDVEAPSGVRRGEPRVGDGMLVLNRE GRVRYASPNAISVLYRLGYKGELEGRYLAELMSDLLSKLRPVDEILPLVLTGRAAWRTEL ESKKVSVSVRSIPFRRGEFRTGALLLVRDISEIRRRERDLLSRDTMIREMHHRVKNNLQT VSALLRLQKRRVESPAAQAALEEAMRRVSVIAVVHDVLSQGVDPEVDFDEVVSKGVRLGP TLANPNKHIVLEQIGKFGTISSADATSLALAVTELVTNAIEHGFVCETEDESVHGNVWIR SRRYDDRLEVVIADNGVGIGDGEGPGNGLGTQIVKTLVTTDLDGTIEWRAREGGGTEVVL DFPLRSGT >gi|294971285|gb|ADNU01000043.1| GENE 48 46762 - 51687 3889 1641 aa, chain - ## HITS:1 COG:PA3068 KEGG:ns NR:ns ## COG: PA3068 COG2902 # Protein_GI_number: 15598264 # Func_class: E Amino acid transport and metabolism # Function: NAD-specific glutamate dehydrogenase # Organism: Pseudomonas aeruginosa # 40 1634 37 1613 1620 1053 38.0 0 MNTRKQPYIRGEKVTEVYPAEIAQAWHSLTGHTPPQNLLETYYPRIASSDFETYGAKTLA AVAIHHWEVASQYTGEQAVIDIHNPEPSDPDYSGSRTVIDIVVSDMRYLLSSLTADLTGE GYALRAVHHPQVITERTGDGLRIIAPQGTAHTTETTTSVLPIITADVTKDDETLESWTHI EIDAIPEPEFDALRKKIAQTIEFVGAADRDRDDMAAKAKEIAAELRNQPPGIDLRTEAAQ AADLLDWLDGRFAFMGYREYRLENNGETTSLEPIPGTARGISALREPKASPLSRAVASHA SDRHVLVLTKANSRSKLIRRGFLDYLGIKTFDENGRIIGERRFVGLYTSSMYTASVLTIP VVREKCEWILRESGISRNTHSGDELVSILETYPRDDMFHAAKEEILDIAMSVVNLQEKRE ASVFIRRDTYERYVSVLVYVPRDLYDTASRRRVENVLRELYRASSVDFDVLLSDSALARL HFVVRVDPKDLLPEIPSGQVSNRIRGALRSWNEDVREFLSPSSERLSHAVAQRGGLWGQA FPPSYQDDFTPHDAVADVQRFEAMESDNTPYVHVTRAKGSSDRHIRLALYRFEPANLSDI LPYMANLGAEVVDERPYHLELADGTSRYIYDFGLEFSQDVSESDFERIEDAFKAGWQGKR EHGRMDKLIVAGLTWQNVALLRGISHYLRQSGFSLSEKNMGDVYSGHPEISRLLVELFTA KFDPDFAQDRESAVAEKTEEIYEALAQVTSLDADRILRATAEVIAATVRTNVFQRDENGE PRPANVFKIKPELLEFSPKPRPALEMFVYSPEVEGVHLRFGRVARGGLRWSDRRDDFRTE VLGLVKAQMVKNALIVPTGAKGGFYPKRLPDPAVNRDAWGAAGQAAYEVFISSLLDVTDN LVVEDGKQKTVHPERTVRYDEDDTYLVVAADKGTARFSDVANKIAVDRGFWLQDAFASGG STGYDHKAMAITSRGAWKSVERHFRELGVNTATDDFTAVGIGDMSGDVFGNGMLRSEHIR LVAAFDHRDIFIDPCPDAATSYHERKRLFELPRSSWQDYNRDLISAGGGVFSRSSKSIEV SPEAAEALGMKAGAYTAPDLIRAILCAPVDLVYNGGIGTYIKSEAETHAQVGDKANDAVR VNGADLRARVVGEGGNLGVTQLGRIEAALNGQKINTDAVDNSAGVDSSDNEVNIKLLLST LIEHGEFPAEDRVSVLESMTDEVADLVLANNYSQNVAMGEARSNSLRLTGTLSRLMKYLE NNQGLDRAVEFLPSSKELNRRVSEQGVGLTSPELAVLLAYVKMNAADAILESDVPDEPFM KKHVLQYFPKTLTEKYAEQLTEHPLFREIATAHLVNRMVDRGGLTYIFRLVEETGASIPH VARVFTTVSEVFDLDEHFAEIFALDNKVDTATQVALQNNYIRLLDRASRWFVNQAPDFFV VEDEIARYRPTVTELRPHLPALVRGSDRDKLEGRVGDFVRRGVPTDLSYRAAGMLDEYAL LTVAQIAATSESDAEEVAEIYFGVTELIHGVKILENIGALDRSSRWTALARGALRDDYYQ AVAAIVDAVLESTQSDKGTAQDRSDDRLAQWQVHNETSLRKVRETADEVLSLEHVDQAPL SVLLRMIRSLVRSTVYQSQLD >gi|294971285|gb|ADNU01000043.1| GENE 49 51786 - 52250 377 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395800|ref|ZP_06805988.1| ## NR: gi|295395800|ref|ZP_06805988.1| hypothetical protein HMPREF0183_1486 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1486 [Brevibacterium mcbrellneri ATCC 49030] # 6 154 1 149 149 286 100.0 3e-76 MKSIRMQQNYGRSPQELLELLATEKFWKEHNFEFSREGDADSGWLVRVMCPVDKDQVPTQ FAQFISPNVRVKQEARVPAAKNDGGVVSYQAHAPGVPAQVGADITIEGQGSSSTVTVNAT LTVNVPFVGPALEGKAEPTARKLLQRQLDKLAEL >gi|294971285|gb|ADNU01000043.1| GENE 50 52212 - 52652 391 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395801|ref|ZP_06805989.1| ## NR: gi|295395801|ref|ZP_06805989.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 146 1 146 146 249 100.0 3e-65 MSVRAYFPLTVSEFRAWPNVTPSIAFTPHPRTHGLKGDALDEVEWLAMSYAAAALEENAA QAGEGRVVLAADIPAPRNTTDAGGDVLAFEPAQLDPSKVVSAHIDDPDELSRLGSDAQAN LSILRDASLVWYDASEFRELIELTLK >gi|294971285|gb|ADNU01000043.1| GENE 51 52649 - 53863 848 404 aa, chain - ## HITS:1 COG:no KEGG:Jden_1816 NR:ns ## KEGG: Jden_1816 # Name: not_defined # Def: hypothetical protein # Organism: J.denitrificans # Pathway: not_defined # 121 386 147 436 462 149 37.0 2e-34 MTIHVIVAVDVEFESQLVSVLNDLDGVSVQARPADESELLAAVVAGTGDVVILGEYFTGA DRELVRRIRGNSGKVLGFGEAESAVAAWDVNEHVSPWASPNELAAALRRVSASVVAPPKP DFAPAPSPTALGRIIAVWGTGSAPGRSTVAANLAHALAQHDTAVLVDADTVNSVQAALLG VLSDTPQLVTLCRNVENLTASTIEEAVTVFDPNFHVVTGLSRAERWPEVKPAHLAEVLQT LRAHYTWVVVDISDRIDPDDEFADPYYDRHSATRVVLDGADHTVVVGTGDPMGLKRLVEL LDSHRIRDLVDFTTVINRVRASAVGQSPEKTLAATLSKFTHVNDPVFIPESVKDVDRAVL AGRTVTEMTPRAPFSLAITELSERFAPRRAEPSRTRRRKRKMAV >gi|294971285|gb|ADNU01000043.1| GENE 52 53860 - 54480 514 206 aa, chain - ## HITS:1 COG:no KEGG:Bfae_20550 NR:ns ## KEGG: Bfae_20550 # Name: not_defined # Def: SAF domain-containing protein # Organism: B.faecium # Pathway: not_defined # 6 202 9 206 213 98 32.0 1e-19 MKETPRFTLPRMRDPRVLVGIILVIASLLGTWAVITRVANTVTVWAASKPLVSGSTIDQD SLTAVEVRLPDTEDKYVRADQSSPVGMSVTGSVAAGELVPASVLVDPARLDGRVIALDIP GNLPQAVQAGAFVDVWATDTKDEEAQPVEVLSRAHVHAVGRDEGGFTSTAGTRLEIYVPN DKLQQVLEVVATDHRVSIVAYPKETS >gi|294971285|gb|ADNU01000043.1| GENE 53 54468 - 54620 64 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFLSWLFSVELHDSERNSNAKWYHLISNGIFRPFAFILCTFHTKGNPHGY >gi|294971285|gb|ADNU01000043.1| GENE 54 54610 - 54828 251 72 aa, chain + ## HITS:1 COG:no KEGG:Krad_3803 NR:ns ## KEGG: Krad_3803 # Name: not_defined # Def: transcriptional regulator # Organism: K.radiotolerans # Pathway: not_defined # 6 66 4 64 75 84 77.0 2e-15 MAIETRFLPLTDVAEILSVSIAQARALVRSGELRAIKVGGRGQWRVEKGELEDYIQRMYR QAQEEVESLSQN >gi|294971285|gb|ADNU01000043.1| GENE 55 54832 - 55335 232 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395805|ref|ZP_06805993.1| ## NR: gi|295395805|ref|ZP_06805993.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 167 1 167 167 307 100.0 2e-82 MTDRWDQLFDDMAARLDSSDAYERMGQQADLVEEAFAERSLAERLSGAHGQKVTLWVEKR GISGVVDRCGSTWVVLVQETRPVLVMLAHVELVRMASRVHGEPGMMSAMSVLRAWARERV FVRVEFAGGFTEGSIDAVGRDYVQLRSGGEFDVVPLTGIRAVWALPE >gi|294971285|gb|ADNU01000043.1| GENE 56 55437 - 56165 373 242 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395806|ref|ZP_06805994.1| ## NR: gi|295395806|ref|ZP_06805994.1| LysM domain protein [Brevibacterium mcbrellneri ATCC 49030] LysM domain protein [Brevibacterium mcbrellneri ATCC 49030] # 1 242 1 242 242 389 100.0 1e-106 MFHRIIGVSVAHATLCFMAVVWNHKALEAIHSGDLSMTLIAICVCLGIAAGIRLQLAILA VFTAWCVRRFAPHRGQGLSQLAVWLAPTHFKKGIAVAVGLVIASASHATAAPMWPTSSPS SPALKAPEPATPSPIWPTSTLPSPHVETPGPALPSPTWPTTNSERPRETAPPAPSPSPTS ESPPKKKTAPKEKRTYTVRKGDSLWKIAQKMNVDPDALFNANRKTIGKNPNLIFPGQELN VP >gi|294971285|gb|ADNU01000043.1| GENE 57 56162 - 56593 160 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395807|ref|ZP_06805995.1| ## NR: gi|295395807|ref|ZP_06805995.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 143 1 143 143 221 100.0 2e-56 MTAQLDAPVIRKPHARTSHTRPTPPAPRSPRVETSGVDNVVTALAVACVEILQGRRSAST LVRWATPELIDRLRTFAQVRTKLARTRPAPAARISPGAIRVCHLNPNVVEASVNIMSPDR RRAVALRLESTSGRWILHELVIV >gi|294971285|gb|ADNU01000043.1| GENE 58 56632 - 59334 2918 900 aa, chain - ## HITS:1 COG:ML0779 KEGG:ns NR:ns ## COG: ML0779 COG0653 # Protein_GI_number: 15827340 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium leprae # 4 874 1 897 940 985 60.0 0 MANILEKLLRRGEGRTLKKLRNYTTAINELSEEFEKLSDTELREETDRFKERFKDGESLD SILPEAFAAVREASSRTVGLKHYDVQLMGGAALHLGNIAEMKTGEGKTLVATAPAYLNAL TGGSVHVVTVNDYLASYQSELMGRVFRFLGMETGCILAQQTPDVRRKQYAADITYGTNNE FGFDYLRDNMAWTADEKVQRGHSFAIVDEVDSILIDEARTPLIISGPSEGDADRWYGDFA TVVKRLKRDRDYEVDEKKRTVGVMEAGIERVENYLGIGNLYDEANTQLISFLNNSIRAKE LFTRDKDYVVLDGEVLIVDEHTGRILKGRRYNEGLHQAIEAKEGVKVQAENQTLATITLQ NYFRMYDKLSGMTGTAETEAAEFNSTYKLGVVPIPTNKPNQRVDHTDIVYRNMEVKFNAV VDDIAERHEEGQPILVGTTSVEKSEYLSRLLAKRGVRHEVLNAKHHEREAAIVALAGRKG SVTVATNMAGRGTDIMLGGNAEHLAVAEMEKRGYDQHEDPETYEEAWQDVLAEIEERVEE EAKEVRELGGLYVLGTERHESRRIDNQLRGRAGRQGDPGESRFYLSLTDDLMRLFGANAA ERILTMTKAPEDEPLESKLVTRAILSAQTQIEQRNAEQRKNVLKYDDVLNRQRTVIYGER NKVLEGEDLAEQVANFREDVMQAYVNGATAGSPEDWNLDELFSAVGELYEPTITAEELVE DAGGKASLTRDKVFTELLSDMEVAYGEREEQLGEEGAREMERRVILSVIDKRWRDHLYEM DYLKNGIGLRAMAQRDPLVEYQREGFDMFNQMQEGIKEDVVRLTNTLEVKVTVNPGKDLE DPSDDFVEVEAEELKQKKTRLLLSAPSEDGGTDVTPEDEPQDEAPKNRQQRRQAKKKKKR >gi|294971285|gb|ADNU01000043.1| GENE 59 59455 - 60111 494 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237670455|ref|ZP_04530429.1| sigma 54 modulation protein; SSU ribosomal protein S30P [Brachybacterium faecium DSM 4810] # 1 215 1 216 219 194 48 1e-48 MDIVVKGRNVTLSESFRSHVEDKVSKVEQLAPRALRVEVVLTHDPNVRQPENTERIEITV IAKGPVLRAEATASDKYAALDLAWAKLLERLRRARDRQKISRQGKHRSASTAEVLASMEV VDPVIPSENEKDEKRETPQNIDQTGGRVPSEGDSPVVLREKTFAATPIALDEAINRMEMV GHDFYLFIDEASTKPSVVYKRRGWSYGVITLDPELTED >gi|294971285|gb|ADNU01000043.1| GENE 60 60161 - 60862 501 233 aa, chain - ## HITS:1 COG:Rv3242c KEGG:ns NR:ns ## COG: Rv3242c COG1040 # Protein_GI_number: 15610378 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Mycobacterium tuberculosis H37Rv # 6 207 2 200 213 85 37.0 8e-17 MLSEFVDLLIPRVCAGCGCETVSLCSACVRSLDTEPVATMPRYGTVKAYGAGSYEGVLRN VIVNYKEHDRRDLAPVLGLMLARAIASALAEAPVSSAPVLLVPVPARATSARKRGGNHVE TLARNAAEHFIRDGFPMRVAPVLAVRGRGDQVGSGAHGRRRNVRGTHRISHPEVVSKWPR DIRVIVVDDIVTTGATVAESARVLRESHIDIVAVASIGITGSENRNCEENREE >gi|294971285|gb|ADNU01000043.1| GENE 61 60866 - 62542 1209 558 aa, chain - ## HITS:1 COG:no KEGG:Jden_1825 NR:ns ## KEGG: Jden_1825 # Name: not_defined # Def: hypothetical protein # Organism: J.denitrificans # Pathway: not_defined # 18 558 21 583 583 218 29.0 7e-55 MRRLFAVLVCIFLFMGASACARIPSDSQVGTITVDPESGAQTRVDAEGPKPGDGPDAIVR GFITAGASFNNNFSVARSFLTDSLAAEWNPTSSVKIVKREVSLDSVTTNIATDSQTVSFE IPVSAGLDERGVLHENEADTSATMEFHLRQVNGEWRISEAPDGLLVSRTNFDNMFRPIPL HFYTPDFNYLVPDLRWFLRTSSTTTDMVRATLDGPAKYLAGAVVSPIPDNTSLTPQSVTI HDGQAEVGLSATGLDNKTRERIFTQLETTLLSLGSVTSLQLQTPDATLTGGVSVNARVPS EPVAVAISDDSLVLLNGNERNTIDKSPRVDGGRAPALSMDADAVAWLSKSGKEINHFDRT QGSSTQVLVGRDLLAPSFDRFEWIWTAEREGNDLMAVRASGELARINIGFVKNKDIRAIR VSPDGTRLMVLSHSNDESHIDIVGIARDSENKPTKLTGNGTFKVATGFKKIEDVSWAGSQ DLAMLAARTAEEPAQPYIQKVGGNAEALGTVSEGVSITSGADTSSVRVGTRNGELFTYTS GSWQRLLDSNIKDPAYPG >gi|294971285|gb|ADNU01000043.1| GENE 62 62542 - 64218 1121 558 aa, chain - ## HITS:1 COG:ML0774 KEGG:ns NR:ns ## COG: ML0774 COG0642 # Protein_GI_number: 15827335 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 13 521 26 532 562 337 39.0 5e-92 MSLRRVQAWIRILFRGIVRTFTHSLQVRVVAVTVVFTIVAIYGVGAYLSQQIARGLFESK QSDVSATTNGYVAELEALSGLSDSQEAADALNAQLRSMLSRSSLQLQAIALEPAGNSTVP PLVAITTGYEPMSVSDISPELRESIRESPAGNQKFQSAELAGTEAPGLIVAQRLTVNGQG DFILYTVADLTEEQGTLDFVQRALGVSGVVLSILVGGVAWLVTRFVVVPVKAGSEVARKI ADGDLNQRMPVSGRDEIATLAQSFNDMADNLQDQIERMERLTVLQRQFVSDVSHELRTPL TTIHIASDMIFESRDEFDESTRRSAELLNSQVERFEVLLEDLLEISRHDAGAANLLAKPL DITEIVSEVVESVSMVASQANTEILIHAPSAPVMAEADRIRITRIVNNLVVNAVEHGDQK RIDVYVGSNAQAVAVSVRDHGIGMTDDQLENVFDRFWRADPSRKRTLGGSGLGLAISLED AHLHNGWLQVWSQKGNGTCFRLTIPRRAGSTITRSPLPLPPADARVQGASIVAGPPTSDG SVRVHTGSIPIVVEEEDS >gi|294971285|gb|ADNU01000043.1| GENE 63 64215 - 64895 719 226 aa, chain - ## HITS:1 COG:Cgl0731 KEGG:ns NR:ns ## COG: Cgl0731 COG0745 # Protein_GI_number: 19551981 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 225 1 225 226 293 67.0 2e-79 MNARILVVDDDTALAEMIGIVLKSEGFEPHFCATGDGAVEAFRSVRPDLILLDLMLPGKD GLEVCREIREESGVPIVMLTAKSDTMDVVKGLESGADDYVPKPFKPKELVARVRARLRMS EPSAPEILKVGDVSIDVAGHTVEKAGKPVSLTPLEFELLVALARKPWQVFSRETLLEEVW GYRHAADTRLVNVHVQRLRSKIEKDPEKPDIVVTVRGVGYKAGHSQ >gi|294971285|gb|ADNU01000043.1| GENE 64 65097 - 66230 1025 377 aa, chain + ## HITS:1 COG:no KEGG:Lxx05340 NR:ns ## KEGG: Lxx05340 # Name: not_defined # Def: integral membrane protein # Organism: L.xyli # Pathway: not_defined # 18 350 118 457 492 98 26.0 5e-19 MFNSQSASWSVTTDWRTGRHTHEIARPVSDAWTPPVAAGVIPKRPLTVGEILDCSVRLMR TSPAVNFGLPVIVSTLLALLAGAIGAAFLWLTFDYLNALSESDYATNGAFVIVQTVAAMA SFVFLTIIQFFAGIAATSGRDAFDGKKVPLSLAWKRARGRRRALAGFTVAMLGGFIGSAC VFFAPSIVLSLMVNEIAGVLAILVGGALWGVLSAFFLVKFAFVGPLITYERLSVKDAVKR SWKLTNQGFWRILGELALGYLLSSQVVQIIVTPFIMLVPIIMGILIIATGFGTAAFESVV LAMFSLFFIALSIAVAGLMYGYWSALVVVVFFDQKMRLEGFDLVMLREAEDEIRARTRNE GESVTKNQWLAIPQEAT >gi|294971285|gb|ADNU01000043.1| GENE 65 66230 - 66871 672 213 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395816|ref|ZP_06806004.1| ## NR: gi|295395816|ref|ZP_06806004.1| possible delta-aminolevulinic acid dehydratase [Brevibacterium mcbrellneri ATCC 49030] possible delta-aminolevulinic acid dehydratase [Brevibacterium mcbrellneri ATCC 49030] # 1 213 2 214 214 397 100.0 1e-109 MSWPILTLTPGRDEARRWAEKELAKPEYRDSDISFFERIGRAIQRLVNSTIDKALDLNNP WLIIVFALVIVGIIVFFVWRANRGTGDAFSPQLFDKTDVAGVEKPSEYRKRAADAASKGD WNTAVQEMVRASVAHLARAGAVELKTSSTAHELTQSAARTYPHLGRDLSEASNLFDAVSF STYQATQEDYAFTQAVDAKVTQVTKTTPEKVDA >gi|294971285|gb|ADNU01000043.1| GENE 66 66868 - 68070 886 400 aa, chain + ## HITS:1 COG:no KEGG:MTES_0532 NR:ns ## KEGG: MTES_0532 # Name: not_defined # Def: hypothetical protein # Organism: M.testaceum # Pathway: not_defined # 29 399 16 383 392 134 31.0 8e-30 MSAHLDVAVRGTVGDTSASAGQKIAAFGKSAVVWIVVVALVLIAAIIGFLTSTDPGEERN LHYDNTGEDGTAALAGVLRSHGVKVSTTEDYEKALAGAKDPDTTVLVINPDTVDQDKRNA MRDAMKKHGSHIALVNPGFEVAGYSSRLTFASGSTYTNTHPEPSCDFGPASRAGKVKRTN GGYRVLPEDNYEGCYPMDGDAYSLIHAPEGKGSVTVMGEEQWFTNAHLREDGNAALSVGT AGLKPNVVIYFAMYDFDEGVDPLSTVPGWFFMTLLWLLPVGLVAVIWAGRRFGPLAVETL PVTVPPIETVTGLAGLMHRTGNRSEALRILRASALVKMGRTLAVPAHAESAEVCQAVAAR TGYDYTELEYLFITAVPENDAQLSDLATRIANIEREVRAL >gi|294971285|gb|ADNU01000043.1| GENE 67 68067 - 69287 1149 406 aa, chain + ## HITS:1 COG:MT3794 KEGG:ns NR:ns ## COG: MT3794 COG0714 # Protein_GI_number: 15843310 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Mycobacterium tuberculosis CDC1551 # 97 406 49 358 358 351 61.0 2e-96 MTTPEKPHTPPDQPPQGQPYQQPTPQQESFNPEQAPYQQFQQPQHGTDYQQFQPQGQQYA QQQMQPQEQAHPNAHSEQTDQRWASEHQLDETDHELRESFEKARAEVGKAVVGQTEAVEG ILIALLSGGHVLLEGVPGVAKTLLVRSIASALDLDSARIQFTPDLMPGDVTGSMIYNAQT SSFEFREGPVFTNILIADEINRTPPKTQSALLEAMEERQVSVDGLTRKLDEPFLVAATQN PVEYDGTYPLPEAQLDRFLFKLILDLPPRNTEVEILTRHAAGFNAHDLSRIEPSLSRDTI LDASQRAQNVYCAPEVLEYIVDLVQATRRAPSFALGVSPRGATRLLAATRSRAWLHGRAF ITPDDVKALMGITFRHRVQLRPEAQMDGIGIDQVLDSIVSTVAVPR >gi|294971285|gb|ADNU01000043.1| GENE 68 69287 - 70579 869 430 aa, chain + ## HITS:1 COG:MT3795 KEGG:ns NR:ns ## COG: MT3795 COG1721 # Protein_GI_number: 15843311 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Mycobacterium tuberculosis CDC1551 # 1 430 36 475 475 265 40.0 1e-70 MALTWRFLVLTVLLTFPIALGGSWEFLVAGLAFLILVGIGDFFLAPSTRSIQALRSPGSR IRLGAPTSATLTLVNTGKRTARLHVRDAWAPTAGASDNRFHAVIKPGDTFERVQHLLPVR RGVLPADKLTLRSTSVLGLVARQKSFDVPASIRVMPPFHSRKHLPSKRQKLRELDGRTAL MVRGMGTEFDSLREYVRGDDIRSIDWRATARAQKLMTKTWRPERDRRVVIVIDSSRLAAR RADTGTVFDAAVESAMLLAALAAGAGDRVDVIVADARVRLSVGPLSGKDPLGVLTNKLTP IDPELIDTDWAALTSAVMETSPNHAFVVFVTSLDALTIAEDVLPAIPLLRSRHTVAFASV EDPQLGPMSQNTFTPSQTYQAAVAAQQLMTESSLQGALTHLGIHTVSGFPEDLPPRLADL YIHLKSIGRL >gi|294971285|gb|ADNU01000043.1| GENE 69 70585 - 71577 917 330 aa, chain - ## HITS:1 COG:MT3796 KEGG:ns NR:ns ## COG: MT3796 COG1300 # Protein_GI_number: 15843312 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 14 320 79 388 395 145 31.0 1e-34 MDPNLLAHMHGSQWDRLSVLAGKKLTTQQATEFRELYRRASKDLSRVQSVAPESDVAVRL SNVIHRSRMQLTGVPRGAKATVIDFFGTSLPAALYSIRWYFVGVFIGFVGLSILTTVWLA NDTQTLFNMVPYEDAKRLAEHDFVNYYKENPNSVFAVGVWTNNAWIALQWVVLGITGIYV IIGLIMNAVNVGISGAVMFHFDRVGDFFGYILPHGVPEITCILIAAAAGLKIFTSWMIPV NMSRMQSLAHAARSLITVGVGLIFMLFLSGLIEGFVTPSNMPFPVKMFFGALLTVGICAY AIGLGRPAVKQGLTGDLEESRAGYRVVTAA >gi|294971285|gb|ADNU01000043.1| GENE 70 71642 - 72457 472 271 aa, chain + ## HITS:1 COG:Rv3695 KEGG:ns NR:ns ## COG: Rv3695 COG1714 # Protein_GI_number: 15610831 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Mycobacterium tuberculosis H37Rv # 1 220 1 216 310 114 37.0 3e-25 MDNLVTGEAVELSIRPASLMSRAISCAIDAIVYTIVYIALLVTIAYFVIEYGLTQELLVN SLIIIFMAATTIMVPCTVEILTRGRSLGKLVMGLRIVRDDGGAISFRHAFLRALIWDFEV LSGSGGIAALAGFLSPRTKRLGDMLAGTIAVSERPRKIVHRALPVSPQLHQWAQTVDLTP VPPGLLYRLTQFLDTSAKNTAESRLERAIELATEVNPYVAPPPPEGTHPEDFIVAVVELT RTAQFHKLRKAEATAHAFSDRVGSLPYSQRV >gi|294971285|gb|ADNU01000043.1| GENE 71 72494 - 73897 1012 467 aa, chain - ## HITS:1 COG:Cgl0724 KEGG:ns NR:ns ## COG: Cgl0724 COG1109 # Protein_GI_number: 19551974 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Corynebacterium glutamicum # 1 466 1 458 458 355 44.0 1e-97 MTRRAQLAHLCGAYDMRGRTHTDFSDELVTAVGYATHKVMHAQYQSNHVLIGHDMREKSA EFASLLCHGVAQAGGTPVNIGLASTDQLYFGSGVLDMPGIMVTASHNPADWNGFKVCGPQ ARGISRQDALGEIVAVAETAEVVVDSALWPVDRVQVTELAEQFAQRIHALTGLAEASRPL TVVADAGNGMAGNFLDRVFDCDAVTLVGLFTELDGTFPNHPANPLDPSTLRDAQEAVRTH GADIGLVFDGDADRCFVIDERGEPTSASAIGALVATREIQRARNLGEESPAVIHNVLTTR AVPQAIAKAGGRAIRTPVGHSGIKQRMRKDNAVFAVEHSAHFYFRDFFCADSGILAACHV IAAMSETDQPLSHLLEPFNAGALSGEINSTVNNPDAVLTRVEAECQAGAFGEGHIDHLDG VTFTAKDFWFNVRKSNTEPLVRFNAESADPACTRDLTDRVLGIIRAS >gi|294971285|gb|ADNU01000043.1| GENE 72 73894 - 74220 174 108 aa, chain - ## HITS:1 COG:no KEGG:SAV_5046 NR:ns ## KEGG: SAV_5046 # Name: not_defined # Def: hypothetical protein # Organism: S.avermitilis # Pathway: not_defined # 2 91 38 127 157 96 55.0 3e-19 MLRTCNKPNCGAPATRTLTYVHADACVVIGPLAVRAEPGAHDLCAEHAQRLKAPVGWQLI SLEPGETPPERSRDDLLAIADAVREAAKPQEQPQGRKHGHLRVIGGRE >gi|294971285|gb|ADNU01000043.1| GENE 73 74080 - 74625 260 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395824|ref|ZP_06806012.1| ## NR: gi|295395824|ref|ZP_06806012.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 100 181 1 82 82 160 100.0 4e-38 MLCAEVMCTRFSANRQRPNHNARVSVNVREGTCCGRPAVGFVTGSKHAFQSITPLYNVLM NARLRRDRRGRSSSRLLLRSAVPARISRRERFERIAASVMRKVRVRAHGELDKVRLTVDY VPPLSADLSHVFEATRHTPATIVVYYIPLSRLDADWNELLGEVVSEQAALLCSCSAEELR P >gi|294971285|gb|ADNU01000043.1| GENE 74 74639 - 74881 316 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395825|ref|ZP_06806013.1| ## NR: gi|295395825|ref|ZP_06806013.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 80 2 81 81 111 100.0 2e-23 MAHKDSKIYYVAILVGDAIGLVVGIAVGLIADLNVPVCAGYGLALGAGIGLAIAFALKGK SAKAGTDAPPETDATPKAGA >gi|294971285|gb|ADNU01000043.1| GENE 75 75005 - 75439 383 144 aa, chain - ## HITS:1 COG:no KEGG:SCAB_55081 NR:ns ## KEGG: SCAB_55081 # Name: whiB # Def: sporulation regulatory protein # Organism: S.scabiei # Pathway: not_defined # 64 144 7 87 87 134 81.0 9e-31 MSEARKYVESLRTQTPGVRSRTAQDWFVDPQGAPGTTADPLDVDPAELVPISGSPSVASV SPLQLLLGEADDDVAWQDQALCAQTDPEAFFPEKGGSTREAKRVCASCEVRSECLEYALA NDERFGIWGGLSERERRRLKKQIV >gi|294971285|gb|ADNU01000043.1| GENE 76 75763 - 76803 1033 346 aa, chain + ## HITS:1 COG:no KEGG:Intca_2521 NR:ns ## KEGG: Intca_2521 # Name: not_defined # Def: F420-dependent oxidoreductase # Organism: I.calvum # Pathway: Methane metabolism [PATH:ica00680]; Microbial metabolism in diverse environments [PATH:ica01120] # 15 229 26 267 368 67 27.0 1e-09 MNSLLTALSLNPGTITQGADLARILITTIDTAQVSIKDGDVIAIDHKLVSIALNGTTSGA GAEEFAQAIREHSCETIAARTYGYPPSTMRLVRTPHNTVELNAGISVTNGTLILPLDNPQ SAAEKLHDTFRREYGVRMGLILTTSLPHPFRHGQRPAALASVGIESQRVADEVASAASLT DISMGVAVIRGIDVGMTNEPINHDTLGPFADWFAHGSAESVYLAMGVDPKKTPALSGDDT DDILTKVTRAISAVRLGAPRTPGENAWRIRPAGSGSRIEIDPANIELTSHAGGHPMMEAT VGLGALIDRLTTALAIENLDVSVDYVWGERGTTEGAHIDVSFRGAS >gi|294971285|gb|ADNU01000043.1| GENE 77 76800 - 77399 436 199 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395828|ref|ZP_06806016.1| ## NR: gi|295395828|ref|ZP_06806016.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 199 1 199 199 382 100.0 1e-105 MIARTIEAIARRTDPVIEWIDEYGRLELTGRVFANWVYKSAGLLRDTFPDALVLNPEGPL HWRELACIFAACGSDVPVMVGAEVAPPSADSWVGMVASGSDLSPFEDAEELWVFDPAPLA LSTEVESGDTDYISAVRSYPDVAQLLDGPLEYSRFGTAVRAHSVDGPTRLATTSVPETDQ QLSELCHALTYGQLTVDLP >gi|294971285|gb|ADNU01000043.1| GENE 78 77438 - 78208 715 256 aa, chain + ## HITS:1 COG:MT2579 KEGG:ns NR:ns ## COG: MT2579 COG1788 # Protein_GI_number: 15842032 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 254 1 247 248 279 61.0 3e-75 MDKVVSSAAEAVADIFDGARIAAGGFGVCGIPSVLIDALKEQGAKNLTAVSNNCGVDGQG LGVLLESKQIDTVIASYVGENKEFARQYLSGELRVILTPQGTLAEKLRAAGAGIPAFYTV TGVGTQVADGGMPLKYDSDGNVIEESKPKVTRELDTFGETETYVLEESLPCDFALVRAAK ADRHGNLVFHASARNFNPPAAQAGRITIVEAEEVVEPGQLDPNEIHLPGVYVHRIVELTP EQAKDKSIEKRTVRNS >gi|294971285|gb|ADNU01000043.1| GENE 79 78205 - 78870 649 221 aa, chain + ## HITS:1 COG:MT2578 KEGG:ns NR:ns ## COG: MT2578 COG2057 # Protein_GI_number: 15842031 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 207 7 210 218 278 70.0 4e-75 MSLTRNQMAARVAQELEDGSYVNLGIGLPTLVPNYVPQDVHVVLQSENGLLGVGPYPTED QVDPDLINAGKETVTMLPGASYFDSATSFGMIRGKKVDFAVLGAMQVARNGDIANWMIPG KMVKGMGGAMDLVHGARTILVVMEHVAKDDSPKLLDACSLPLTGKGVVQRIVTDLAVIDV RDGEFVLVERAPGVDVDTIVEKTGSPLRVEGDIPEIQVPQV >gi|294971285|gb|ADNU01000043.1| GENE 80 78930 - 80099 976 389 aa, chain - ## HITS:1 COG:MT3353 KEGG:ns NR:ns ## COG: MT3353 COG1482 # Protein_GI_number: 15842844 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 4 389 4 406 408 229 38.0 1e-59 MFEIRGTVQDYAWGNTQGIQQIVGIPVDGTPAAEYWLGAHPKAPSPTADSTLLEHVSAHP EHLGEEARHTYGDRLPFLLKILSARTALSIQAHPTLDQARAGYERENAEGISMNAPHRNY KDAWHKPEMMYALTPFDALCGFRSPHATKATLERLDTASGSPLLARAIETLDGPDPLQTT LSTILTEPGYGELADQLAELTYEPVDAHHPSLEGSAQDPVTTLKRVNTDFPTDPGALVAL MLNMLTLNPGEAIALNAGILHAYLGGLGIEIMASSDNVLRGGLTSKHIDIDELKAVVTYE PTAPDRVNADEGQWFKGATDDFKLMPLTSADTTVELDGPAIALCVEGAYALTTETQDSAT LNTGESVFIPATDGNLKVRGDGKLFIASV >gi|294971285|gb|ADNU01000043.1| GENE 81 80203 - 82683 1653 826 aa, chain - ## HITS:1 COG:MT3918 KEGG:ns NR:ns ## COG: MT3918 COG5479 # Protein_GI_number: 15843433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 301 587 196 498 539 180 37.0 9e-45 MRIRTPLAALAVASVAVSTLGAPQNAQASTARPSVDEMPLTSVDEKGIDEPGARDSSNTT ANAQNRSTRNLPGVFMAQSMGLGANSGGTSQPKEKPGLGGSKSDSTTPSQKPTPAQTPSP SQKPSPTQAPETTEPAMSGSAKDKTEDGVNIASISKVVKVPAGNPSVVGVSYTGHAKVTF EVRTKTGGSWGAWKEIDQENTGEGRPGTEPYVVAGASNIQMRVLGDTAASDAKLVLVDPK KTSGDAAAVAGNSPVPETAGEAAAGTNSNVTCDDNGCEGVENATNVAFAASNVSVGKVDK PPIASRKDWGANESLRKGSPDYAPKVKAAVVHHTAGSNNYSAGDVPGIIRGIYTFHTKGR GWADVGYNVLVDKYGRMWQGRAGDINRPVVGAHAQGFNSGTFGISVMGDYDKQAPSAEAL NAVEHAIAWKLNGVDANGRANVNGRSIRAISAHRDVGDTDCPGDAFYARMGEIRSAVSKL QNGQNVQTPEKNEPQQENLTPIQKAYKGNETALGQPRGNEHKWGDGYVQNYDRGFITWTQ QTGAVILRDGMAHAWWRNRDDIGLPTQNEKPLQHGSYQSFQRGAVHWSPNNGAHATWGVI WKYWKDKGFERGHMGFPTSDVTKSDGQLEQRFEGARVQHTDGFGTVEYAPGPAVRGGAND QNPQPEPERSEAPQQDNKPDEKAEEKSKDKAEDKPKDKPKEKPKKKSTDDIRREMIKEAR KGLGTPYVWGGNTPNGWDCSGYTRYVYNKIGIKIPRHSSAQMRAGRIVSEKEAKPGDIIW APGHVGIVSDKKGKMLDAGSRRTNTSERSYDWMKRRGAKFVRYLDD >gi|294971285|gb|ADNU01000043.1| GENE 82 82541 - 82810 71 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFSSTLVSGISSTLGRAVEACAFCGAPSVLTATDATASAAKGVLILIVQAFSRKSGSEA NAETVAGNDAPTFQNCYIYFRRVELRIRK >gi|294971285|gb|ADNU01000043.1| GENE 83 82870 - 84201 872 443 aa, chain - ## HITS:1 COG:SPy1733 KEGG:ns NR:ns ## COG: SPy1733 COG1316 # Protein_GI_number: 15675582 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 68 346 1 261 424 77 25.0 6e-14 MGRFALRITLITWAILFIVLLLAIIRKQWLISLATSSFVLIPLMVFAVVLGVVWILCLLD TVRLVRVVSLGKRTRPVFLSAALVSVLVVGGAFTYGVTTLNSGRQLLDSIFSSRKVEKAA DGRYNIALLGSDAGKGRTGVRPDSLSVVSIDAKTGAAVSIGLPRNMQNVPFPKGSPLAKK YPHGYNCGDECLLNAVYQLGEENASLFPEGPPAGVQATKQAMEGVTGLKIQYYAMIDLKG FEQLIDAMGGITLTSHVRVPISSKTNKRTGKHGPPKGWIEPGENIHLDGYHALWYARSRE FASDYERMTRQRCVQEAMLTQLDPATLLSRFQKIAAAAPNVVSTDVPRSQLDYFVDLAQK TRDHKLGKLNLSPPRVKPSHPDFDKAHSLVQEAIKKSEENAQKDKQGLGAPADVSYYAMG ADTLAAPESNDDDAKDKEICEVK >gi|294971285|gb|ADNU01000043.1| GENE 84 84375 - 85520 1120 381 aa, chain - ## HITS:1 COG:MT3374 KEGG:ns NR:ns ## COG: MT3374 COG1960 # Protein_GI_number: 15842864 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 2 380 10 388 389 466 65.0 1e-131 MFDLYKLSEEHEEIRAAVRDVVENKITPFAAEVDADSRYPQEANDALIATDFFAPHVGEE YGGVGADALATAIVIEEVARGCMSSSLIPAVNKLGSMPVIIGGGEEVKQAYLPRLARGEG FSYGLSEREAGSDTAGMKTRAVRDGDGWVLNGVKTWITNAGVSEFYTVMAVTDPDGKRGN NITAFVVEKGDEGFSFGEKERKLGIKGSPTRELFFEDCWIPDSRRVGEEGQGLKIALKTL DHTRVTIAAQAVGVAQGALDYAIDYVKERKQFGKRIADFQAIQFMVADMATKLEAARQLT YAAAAKSERNDDDLSFFGAAAKAYASDVAMEITTDAVQLLGGAGYVVDHPVERMMRDAKI TQIYEGTNQVQRLVMGRKLLG >gi|294971285|gb|ADNU01000043.1| GENE 85 85513 - 86037 459 174 aa, chain - ## HITS:1 COG:TM0446 KEGG:ns NR:ns ## COG: TM0446 COG0041 # Protein_GI_number: 15643212 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Thermotoga maritima # 3 163 4 160 171 175 59.0 5e-44 MTVGIVMGSDSDWPVMSAAADVLSELGIDFTAEVVSAHRMPHDMIEWGSDAAERGVRVII AGAGGAAHLPGMIASVTSLPVIGVPVPLKYLDGMDSLLSIVQMPGGVPVATVSIGGAKNA GLLAARILASGVDDEANALRVRLDSYREDLYTQARDKGRALTQKLEDTQKESHV >gi|294971285|gb|ADNU01000043.1| GENE 86 86034 - 87197 832 387 aa, chain - ## HITS:1 COG:Cgl0691 KEGG:ns NR:ns ## COG: Cgl0691 COG0026 # Protein_GI_number: 19551941 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Corynebacterium glutamicum # 4 372 2 381 387 340 51.0 2e-93 MSFPRVGVIGAGQLARMMAPAAEALGVHFHVLAESADGPATHVSSHVTVGDYKDYATLKQ FASTVDVITFDHEHVPNEHLVKLIDEGFNVHPGPHALQYAQNKLKMRAKIDELGLPNPRW AQIETVDDLGAFVREHGAVVLKTPTGGYDGHGVAFIRSEADLEAVSDWFSSGPLLAEQLI DFSRELAVMVGRSPSGQTAVWPVVATRQKDGICYEAVAPAPGLDADLARTITQDVLTLAH ALDVTGVMALEMFQTADGYLVNELAMRPHNTGHWTQDGSVTSQFEQHLRAVLDLPLGDPS PLAPYTAMGNVLGADRDDLYHAYLHVLAHDPRAKVHMYGKSVRPGRKLGHVNVTGENPED VAQRALHAAEFIAGVDDNPWPNRTEKA >gi|294971285|gb|ADNU01000043.1| GENE 87 87338 - 87775 398 145 aa, chain + ## HITS:1 COG:Rv3277 KEGG:ns NR:ns ## COG: Rv3277 COG2246 # Protein_GI_number: 15610413 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 12 134 76 206 272 87 37.0 7e-18 MKFRRETLRVAKFSAVGTVAFIVDFLVFNLLRLEVLHLGPVWAKIISVALATTVSWLGSR YWTFTDGRNKSKTKEAIYFFSINGAGLLIALACLWVSHYLLGFRSALADNISGNVVGVLL GNIFRYFMYRFFVFKPAPKRQRLDV >gi|294971285|gb|ADNU01000043.1| GENE 88 87776 - 88915 746 379 aa, chain - ## HITS:1 COG:TM1581 KEGG:ns NR:ns ## COG: TM1581 COG1524 # Protein_GI_number: 15644329 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Thermotoga maritima # 47 375 50 376 381 98 27.0 2e-20 MRPPDYADAGLLSDIVPAAAVTLGASQILEDRQRVRAEKVGLDHETRVVVVALIDGMGFE LLKASWAYAPFLRSVRDSVAEFSAGFPSTTANSLSSLGTGLLPGAHGVMGYKLKDPESGD VFNQLTWNTARDPHTWVPDATLFERLHASGVDVVSLGEPKFVGRGLNAASLRGGAFRGSH QFDQRAQHAVEEAKKPGRRLIYFYWGALDKTGHGKGTDSHAWTDELEAVDAGLARLANSL PRDAQLLITADHGMVNVDYDARIDLADHPEVCELVSAVGGEPRATHLYTPRPLETASAIN EIAAGRVYAMTRKQAVADGWFGPVRPENLGRIGDVVAISHAGTAIVDSRNDSPSALKLRG HHGGITAEELAIPLIALGK >gi|294971285|gb|ADNU01000043.1| GENE 89 88916 - 89497 419 193 aa, chain - ## HITS:1 COG:no KEGG:AARI_20120 NR:ns ## KEGG: AARI_20120 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 7 182 14 190 195 152 41.0 9e-36 MSVSGALLRDLQDAGYYPHLAANIINDVLFDEPVVEHCVHMETHMDFESIHRHVTAFVLT ETRLILVHVDDEPGSPEQSMRGVASVEDIPFDRIRTVILSRIYQDPAHFTPGQKPVEVGV SLGWESVRRLEMFPESCADPQCDADHGYGGTSVPEDVNLRVSAQAEGQDAVDQAERFALT LKKLVYYARRDAS >gi|294971285|gb|ADNU01000043.1| GENE 90 89550 - 92255 1978 901 aa, chain + ## HITS:1 COG:AF1511_2 KEGG:ns NR:ns ## COG: AF1511_2 COG1042 # Protein_GI_number: 11499106 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Archaeoglobus fulgidus # 191 888 1 691 691 342 32.0 2e-93 MVTYPKNWEADVVLRDGATAHVRPIVPSDADGIQLMHSKQSPESIYLRFFAPMPTIPPRD LERFVNVDYHDRVALVMVAGEEIIGVGRYDRLDETSAEVAFNIADAHQGRGIGSILLEHL AAVARERGLSVFTAEVLPQNRSMLQVFAAAGYEISREFEDGVVAVRFEIDPTERSKQVLE SREHRAEALSVRSVLNPASVAVIGASRKRASAGNLLLRNLASAGFKGDLHIVHPHAPVVA GMPTVKSLQDIEGTIDLAIIAVPAPAVVDVVKDAASRGVRAVVVISSGFAETGPEGQELQ REVVATARSHGMRVVGPNSFGIANTSTDVALNASLSPFFPEPGPLGLFSQSGALGTGLLA AAKSRGLGISTFVSAGNRADLSGNDLLQFWEEDESTQIVGLYLESIGNPRKFARIARRVA RQKPVIVIKSDLTGRELPPGHQVRVSSLSGSALNQVLTQAGVIRADSIHQMFDVAQVFAT QPLPSGARVGVIGNSAALSTLIVQRARAEGLRIDTPPVSLHPEVTTDEFEEHLAKMYKDP SVHSVIVAFAPSARGQEREITQVLAEQAAVSGKTTVACFLGLMGAQEELTAYTRSAEGKR EIHTVPSYMGPEDAVWALARVTEYAQWKRSDQGNYPELEGFDKRALRALIEKVLQRDSEH DSEEGTTSATVRLTRDETQELLHACSIQVLPYHPSSTVEEAKEIARKIGYPVALKAVDSR LRHRLDLGGVRLDVSSDEEMDFYWKSIRDVIAARLDDDADTRIDVQTMAAPGVACVVRGG EDPLLGPMVSFGLAGDSSELLDDVQHRVAPLTDVDAKSMVRSLGSSPRLFGYRGGPVMNV APLEETILRVAALIDEFPAIRLVEFRPISVTESEQDILSVRIELNRESDRIDSARRRMSA H >gi|294971285|gb|ADNU01000043.1| GENE 91 92315 - 94879 2200 854 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 5 755 7 761 830 492 39.0 1e-138 MADHIVDVDVSQEMESSFLEYAYSVIYSRALPDARDGLKPVQRRIIYQMGDMGLRPDRPH VKSSRIVGDVMGKLHPHSDVAIYDALVRLSQDFVMRVPLVDGHGNFGTLDDGPAAPRYTE ARLDDAALTMIAGLDEDVVDFVPNYDNSLTQPEVLPSAFPNLLVNGASGIAVGMATNMAP HNPGEVIAAARHLIENPQATVSELMRYVPGPDLPTGGRIIGLDSIREAYETGRGTFRTRA TVKFENITARRKGIVVTELPYLVGPERVIEKVKDQVQAKRLTGIASIDDYSDRKHGLRLV IGIKNGFNPEAVLEELYRLTPMEDSFGINNVCLVEGQPRTLGLKPLLEVFVDHRISITRR RTVFQLGKAKDRLHLVEGLLIAILDIDEVVQLIRSSDDATQARTRLMDVFDLSEIQATYI LDLQLRRLTKFSRIELEAERDELKSRIEYLQGILDDDDKLRALVSDELQETSDRIDSPRR TVLVEGNLKELRAAKKGTKLTVADEPCWVLFSTSQRLARTTGQEPLSAQGRRASHDALVS QIATTSRSTIAAVTNTGRVVGVDVVSLPQLPPQAARPTVAGGVRVSEYFTLEKNEKVIGL IDPERECVVGTKQGVIKRINGNDQFKDGSTLINLKPKDEIVGLAQPEDLNTHSAVFITSN AQLLAFDLEGVRAQGYAASGVAGIRVASDAHVIGFYAVDSHQPNQVVTIATGVNFDGKPT QSIKVSDFNEFPHKGRGTGGVRAHRFLKDETELVLGFAGPSPQASAATGGARQLPAELSK RDASGQPLDSKIDAVGTVPVATSSQETTEPPAQSEEAGATSATNTGMATGGPNLGDDPTA HIGREREDDDGSLF >gi|294971285|gb|ADNU01000043.1| GENE 92 94893 - 95834 481 313 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395842|ref|ZP_06806030.1| ## NR: gi|295395842|ref|ZP_06806030.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 313 1 313 313 619 100.0 1e-176 MVHVGYDTNFLILDPRAVEVCSAYVLGDASEIDLRPWAEYAMMMRVIRHRAKAWALKAPR QGALDSTVHVWGRPFLTAGETADEVAARVEQWLGSSPANVDDLARENLRAIWHDQPNVDA LIAQSDPGDDWLRLSPDDLRYEVCGQLDRLRSAVKAYESGRGSDPAPDSAGDQSNTELLE RACFNFTVNVVSHSPGWMSSGNTIASISWWGGDRFPLAAKLESRLPGLSVQAETWAHENY CVGMTVGPKDLDMLPQEVTDDYVRVFAEQLRGDEEYARKELTKMVESVVTARTLKWGWCE ASEVYSGAEGRMN >gi|294971285|gb|ADNU01000043.1| GENE 93 95877 - 96995 979 372 aa, chain - ## HITS:1 COG:MT2268 KEGG:ns NR:ns ## COG: MT2268 COG2114 # Protein_GI_number: 15841703 # Func_class: T Signal transduction mechanisms # Function: Adenylate cyclase, family 3 (some proteins contain HAMP domain) # Organism: Mycobacterium tuberculosis CDC1551 # 21 322 47 336 388 77 26.0 3e-14 MTDFSGRLAKPDLGTEEPQHEELEPEAQLRANALNLEEALIGGKRVLTRKEVAQLAGVST YSARKFWRALGLPQIPAGKVAYTMHDVGAISAVASLVDEDVLDEDTAMALVRAVGHTTDR LVVWQMESLVEFLTDTRGYSDLEARSVVMPLLEKLLDPLEGLLVYSWKHNMSNVLSRLNV NVGDGLAMENREGWFDSAMPLARAVGFADLVSYTRLSQQMEPKQLAKLVKKFQDLAYAIV ATGGGRIIKTVGDEVYYAAETPLAGAEISMSLQEQISADSELPEARVGFSWGKVLSRMGD IFGSTVNLAARLTAMTEPGTVMTDVDTASIIQRSDDYVFSNRRNVTLQGLGTVAVTEMTR GSARAIDLDLTQ >gi|294971285|gb|ADNU01000043.1| GENE 94 96992 - 97780 330 262 aa, chain - ## HITS:1 COG:Cgl0689 KEGG:ns NR:ns ## COG: Cgl0689 COG0340 # Protein_GI_number: 19551939 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Corynebacterium glutamicum # 23 260 28 267 269 131 35.0 1e-30 MVSTHHFPHAFERAAHACGFEPAHVVWPQSVGSTNDELVSELMRDADAWPDFSIYGTEFQ SAGKGRLDRQWTVQPGEALTFSTVFRAQASENLGWVPLLTGWAVAQAIRDLGVDASVKWP NDVLIDGKKVCGILCRYVSEAGAIVIGSGINVHMSNMPVDTATSLHRHGDIDRAELLARI MLHLQSALTNAFESDQPEHSHAVTQACSLISTVGQHVRVSLPGDTTLEGQAVGISPSADL RVRTDSGVVDVSAGDVVHVRPA >gi|294971285|gb|ADNU01000043.1| GENE 95 97844 - 99421 1489 525 aa, chain + ## HITS:1 COG:Rv3280 KEGG:ns NR:ns ## COG: Rv3280 COG4799 # Protein_GI_number: 15610416 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Mycobacterium tuberculosis H37Rv # 6 525 24 548 548 613 60.0 1e-175 MSSAKTTAAKLAEFIERRRVAHAGNERSVANQHKRGKQTARERIDALLDEGTFQEIDEFV RHDSTAFGMEKNRPDGDGVVCGLGTIAGRTVAVFAHDFTVLGGSLAEANGKKIVKTQKLA LKLGCPIIGINDSGGARIQEGVASIALFAEIFHWNVQSSGVIPQISLIMGPSAGGAVYSP ALTDFTIMVDGTSHMYITGPDVIKTVTGEEVGHEELGGGRTHNTVSGNAHYLAQDEADAL DYVRDLLSFLPQNNMDPAPHYPQPADLELNEDDYALDSIMPDSPSTPYDILDVVRAVVDD EDVLEVSELFAPNVVTAFARVEGHSVGIIANQPMQLAGTLDIDASEKAARFVRLCDAFNL PILTFVDVPGFLPGTDQELGGIIRRGAKLIYAYGEATVPLITLITRKAYGGAYCVMGSKQ LGADINLAWPSGQIAVMGAQGAANIVYRRKLKAAGEEGQDVEALRAELIDDYENELLSPY KAAEAGFIDAVIAPRETRERIVRSLRALRNKHVRGPERKHGNIPL >gi|294971285|gb|ADNU01000043.1| GENE 96 99418 - 99609 167 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395846|ref|ZP_06806034.1| ## NR: gi|295395846|ref|ZP_06806034.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 63 1 63 63 64 100.0 2e-09 MTNYSTRPPLTAAEELALAKEAALAALVALQPSDVSHEEEPRRWADPQRNVRQSPRGSWA HRA >gi|294971285|gb|ADNU01000043.1| GENE 97 99610 - 100779 1093 389 aa, chain - ## HITS:1 COG:L157472 KEGG:ns NR:ns ## COG: L157472 COG0477 # Protein_GI_number: 15672136 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 3 389 4 392 393 210 33.0 5e-54 MNRLWTGNFILASCVNFIAAMMFYLLMTSMASYAIREFGAGQAVAGFASSSFILGAVFSR MLAGKYMDFVGRKTLALVSMIAFIVLGAAYIPVDNIVVLIVIRLLHGAAFGLNNTVLSAA VQTMIPQHRRAEGTGYFGMTVSLAMALGPFVSVVMSQKYGMFWVFVVCIVLSTVGTLLTL FLKVDERTPSREEQLLKWKFHITSFIDPRALPIASMMALCGIAFSLVLSFLEGYSHQIGA AAGASWFFIVMAACTFTSRLFVGRIQDTYGDDVVMYPIFVLMAVSYVMLATAQGSGMVIA AAVPLGLGFGSVMPCAQAIVINQSDASRYALAVATFFILLDTGTGLGPVLIGGLANVWGP RSMYWAAVVLVACAAVVYVMTTRRQRRPE >gi|294971285|gb|ADNU01000043.1| GENE 98 100856 - 102517 1800 553 aa, chain + ## HITS:1 COG:Cgl0137 KEGG:ns NR:ns ## COG: Cgl0137 COG4805 # Protein_GI_number: 19551387 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 549 1 547 553 435 45.0 1e-121 MTIHTSRTPSAVDNVAEEYARQVYTNSPSMRIESGVDGDPYELDDYSPAAAARHDELNAR TLAELNRVEATSADLDDVDAVTLDAMRERLGLERELHERGLDSGDLNVIASPVQELRDLF DLVPTQTAEDWDHNAGKLANIPSALAGYRDALQARVASGKAPAIRQVKRVIEQAQELAQP DGHYGKFIAKARGTADEALQSRLTEAATAAQDAMAQIAQFLKVEIAPLAVQDDACGREDY ELFSRQFLGAQVDLDETYEWGLDQLAHIDAEQKKVIEQLYPGASLAEAFEALNKDPKYTI HGLDGLKTWMQEKADEAISMLAGTHFDIAEPLKTIECMVLEDGTGGIYYTGPTDDFSRPG RMWWSVPRGVETFAAWQELTTVYHEGVPGHHLQVAQATYLRDTLNTWRRNLCWVSGHGEG WALYAERFMHEQGFLEEPAYYFGMLDSQRLRAARVCLDIGVHLGKEAPESIGGGTWDADK AWKFLTDNAAMDRSFLAFELDRYLGWPGQAPSYKVGQRLWEQARDSAGGSLKEFHSRALN LGSVGLDTLMRAL >gi|294971285|gb|ADNU01000043.1| GENE 99 102527 - 102832 188 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395849|ref|ZP_06806037.1| ## NR: gi|295395849|ref|ZP_06806037.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 101 1 101 101 155 100.0 6e-37 MSTHAEDLHDEIRRLQIRISSFTTAQLNAPDANNVSRRERIRMSLQELADVRATGVVPQL SDRVLADQVVVLLMDCQPEYGASDDQTRQALSIAQDLRRRL >gi|294971285|gb|ADNU01000043.1| GENE 100 102834 - 103625 1026 263 aa, chain - ## HITS:1 COG:XF2760 KEGG:ns NR:ns ## COG: XF2760 COG4760 # Protein_GI_number: 15839349 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Xylella fastidiosa 9a5c # 72 259 62 247 253 109 38.0 5e-24 MSNPLMGRSVRQGMNSVQTPSADELNSMYMAPSATTEHRVQQDRMMTYDDVYMKSLLSFG VLLAGAAVGWFVPMLALPACIIALVLGLINGFKREPSPVLILTFAVFEGVFVGGISKIFN MQYAGIVMQAVLATLAVFGLMFALFKFRVIRMSPKFTKFLMLAVGGYAIFALINFAFAMF SGGSMNARTIDISIMGINMPLGVLISGVAVILAALTLVSDFDMIEKSVGRIPEKYSWMCA FSLMTSLVWLYVEILRILSYFRD >gi|294971285|gb|ADNU01000043.1| GENE 101 103744 - 105318 1773 524 aa, chain - ## HITS:1 COG:PM1104 KEGG:ns NR:ns ## COG: PM1104 COG2978 # Protein_GI_number: 15602969 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Pasteurella multocida # 17 521 12 520 523 310 37.0 5e-84 MSAPATKHKDDLNWLMRLLIVIEKAGNRLPHPFWLFLSLAVIVMLISWVASAAGLSAVNP AKGETVNAVNLTSSESLGAIVSGVVENYVTFPALGLVLVVLFGVAVAERSGLIPAIMRAA LMNASPKWVTVIVALVGTASSVASDAAYMIVIPLGGIAFKAVGRNPIIGCAVAYAATSGG YSAAPMVNSLDAILGGLSTSAAAIIDPEYVVTPVDNFYFNFVSMFVVAGAIVLVTETLLK KRGEDLKPDEVENDTSDTSTDADLTKKLTPVEKRGMWIALIATFLCGVLLFVLALPEGSF LRDEEGAFGPKSPLMAGIAAIIGFGFFVVGIVYGIATKSIKRPSDVPDMIVQGLTPMVPV LLLFFAASQFLALFKMSKLGEILAIKGAEFFQNANTPAIVILFGAYILTAVGALFITSGS GLWTLMAPVLVPMLMLLGIAPEVTQAAYRIGDSTTNIVSPMSPYFVMILGFVQRYKKDAG IGTLLSLTIPLSFAMFVAWGLLFFGWWATGIPMGPGAQTTYELP >gi|294971285|gb|ADNU01000043.1| GENE 102 105272 - 105520 56 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSQFRSSLCLVAGADTRDLLVVFRRINQNFTGKSKIACEQTKTRNTRRCSEFLQAAGLVR HFSRDKVFDGLACKVVVLLFGR >gi|294971285|gb|ADNU01000043.1| GENE 103 105443 - 106525 972 360 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163782670|ref|ZP_02177667.1| 50S ribosomal protein L20 [Hydrogenivirga sp. 128-5-R1-1] # 5 357 5 365 368 379 53 1e-104 MGNPIRVAIAGLGNCATSLIQGVEYYRDAQADEQIPGLMHVQFGDYHVSDLEFVAAFDVD AKKVGQDIADAILASENNTIKIADVPTTGVTVKRGPTLDGLGKYYLETIEESQEEPVDVA QVLRDEKVDVLVCYLPVGSQKATEYYAQACIDAKVAFVNALPVFIAGTKEWDDKFKEAGV PIVGDDIKSQIGATITHRVMAKLFEDRGVILDRTYQLNVGGNMDFKNMLERERLESKKIS KTQAVTSNTSAKLESRDVHIGPSDYVQWLDDRKWAYVRLEGRNFGDAPVSLEYKLEVWDS PNSAGVIIDAVRAAKIGLDRGVGGALLSASSYFMKSPPEQQNDDLARQAVEDFIAGKVSN >gi|294971285|gb|ADNU01000043.1| GENE 104 106643 - 108235 1273 530 aa, chain - ## HITS:1 COG:Cgl0905 KEGG:ns NR:ns ## COG: Cgl0905 COG4108 # Protein_GI_number: 19552155 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Corynebacterium glutamicum # 4 528 2 547 549 621 57.0 1e-177 MTPTDFSPKEIRTQAQRRRTFAVISHPDAGKSTLTEALALHARVIGQAGATHGKAGRRST VSDWMKMEQDRGISISSAALQFEYRDTVINLIDTPGHADFSEDTYRVLSSVDLTIMLVDA AKGLETQTMKLFDVCKHREIPIITVINKWDRPGIDALELMDEIVQRTGMVPTPLTWPVGQ SGDFRGVLNREDGTYTKFTRTDGGATIAGEETMDAEAAEELEGDAWTNAVDESDLLELED QNYDEESFLAGHTTPVMFASAVLNFGVHKILDTLVDIAPPAHARIDVDGNPREVDAPFSG FVFKVQAGMDSNHRDRLAYVRVCSGVFERGMVVTHAATGKPFATKYAQQVFGRDREVIDT AFPGDVVGLVNASALRVGDSLYLDEPVSFPPIPSFSPEHFMVIRAKDSSKYKQFRRGIEQ LDHEGVIQVLRSDLRGDQAPVLGAVGPMQFEVAEDRMQNEFNAPCTLERLAYTIARRTVQ EDIPTLARERSVEVLHRSDGTLLALFSDRWRLQGVEREHPNLTLEPLVVT >gi|294971285|gb|ADNU01000043.1| GENE 105 108273 - 108629 299 118 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395854|ref|ZP_06806042.1| ## NR: gi|295395854|ref|ZP_06806042.1| ABC superfamily ATP binding cassette transporter permease [Brevibacterium mcbrellneri ATCC 49030] ABC superfamily ATP binding cassette transporter permease [Brevibacterium mcbrellneri ATCC 49030] # 1 118 1 118 118 176 100.0 7e-43 MDGVEEFSKVRVDPHRNRLWPVVVAAIVCIPLLVLSVRFSLLAADFMKPMVELGVDFPVL AFMFFLSSAAWLAIATVLIALWVALVRKTFKWRVIWCVVAVVAAGLLPLSWVFSGALF >gi|294971285|gb|ADNU01000043.1| GENE 106 108597 - 112538 3398 1313 aa, chain - ## HITS:1 COG:STM1641 KEGG:ns NR:ns ## COG: STM1641 COG1643 # Protein_GI_number: 16764985 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Salmonella typhimurium LT2 # 27 1306 60 1297 1300 1019 44.0 0 MNSPGKRRGRRRGKAHAHNNHALTHKRIEARKAVDPIFHYPEELPVSAARGEIAQALNDH QVIVVAGETGSGKTTQLPKLCMELGYGINGMIGHTQPRRIAARSVATRIAEETGVELGEG VGYQVRFTAHTDDSTRVKVMTDGILLAELQHDKYLRAYDVIIIDEAHERSLNIDFLLGFL ARLLPKRPDLKVIITSATIDPESFSQHFANAPIVSVSGRTYPVEMRYRPLEGAGSDDDTD GPGTDGTYDTGTADQTDGILDAVDELSREEPGDILVFLSGEREIRDTADALSSHLRKKGA RYSQWEIVPLFGRLSAAEQQRVFAAHNSTRVVLATNVAETSLTVPGIKYVIDAGTARISR YSNRTKVQRLPIERISQASARQRAGRAGRTSPGICIRLYSEDDFNTRPEYTDPEILRTHL ASVVLQMLTLGLVQNENDILSFPFLTPPDSAAVRSGAALLSELGAIRKENGRLRLTKLGR ALGALPIDPRMARIVMAGVEYGVAAEVVVIVAALSLQDPRERPTEMRAQADEKHARFARP ASDFMSYIALWNYVHEQSQKLSTSKLRKLCKDEFINFVRVREWMDLVTQLCTMLKTAGHP IEKPGGGLGAGDQDPAIHTALLTGLLSSIGAKTHNSPDYLGARGTRFRIFPGSGLFKTKP DLVVAAELVETSRLWARTVAKIDPDWVIKAAGPLIRHQYSEPHWSTKKGQAFVYDHTSLY GVALTSDTRVGYARINPAEARDMFIRHALIDGEWNEDHAFVRHNEKALRTAHQLADRMRD NRLRADDELLFEFYDQALPAKVTSAPSFNAWWKKARQANPVALNIDPDALVAGNTDEARE TAAAAFPLEWKLRGLPENVKPNAKLRYTYDPGADSDGVTIHLNEQQATHADPAQFTWQVP GLRLELITALIRALPKAKRKYFVPAPNVARELNQQLEPYEGTLEDAVAQALTARAGGGEL TDLMPIDVHAHDFDTERIPPHLRMRIIVHQSRKKPSQLAEFLKARAEAKSSAPTPRTEPA TRAGEQPRAAGATSAFTPVAGVTKWRWDSLPAGSTLIDRGGHVDLEEVEDAGRSRLLHDR GVARLIARNCAEARAYVVGGLAHADKLVLAGQPNDVVSDCVFSAVHDIVAQREPVRDREA YSACERAVNEQILSALEKTLAHTVKTLTVAQAVFKLISKSSSLEILTGLTDVKEHVETLT HPGWVAHVHPRFLPRYPAYLEAARIRTEKMGQQPARDRQFMDRIHTVQSAITQRAPAFTP ETVGLLPPAWQDLVFDVEELRISLWAPQVQAAHPVSEQRILKALKQCAREHPA >gi|294971285|gb|ADNU01000043.1| GENE 107 112619 - 113536 224 305 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 [alpha proteobacterium BAL199] # 8 304 12 309 312 90 26 3e-17 MLGALEGFGVIGCIILAGFLLGRSGVLGSQGQQVLANTVFFVGTPALMFTTIASTPVSQV FTPALFATAGSALLMAVVMFVFTRARGRSLGEATVAGWSVSYVNIGNLGIPIATYVLGSL NAIPPVLLFQIIVLAPIGFAILDATRTVGAEWWRPIIRVFTNPILIGSVAGLIASVTGFK LPAVLADPIAMLGATSVPLTLMAFGISLKDGWTLPQPGTRTQLTAMTFLKLVVHPFVAWL IGGPLLGYSGGDLLAIVVTSALPTAQNVYINALKYRQSEVVTRDVVFITTLLSIPAVVLV AVLLA >gi|294971285|gb|ADNU01000043.1| GENE 108 113647 - 114759 1093 370 aa, chain + ## HITS:1 COG:no KEGG:Arth_1203 NR:ns ## KEGG: Arth_1203 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 146 369 136 358 397 176 44.0 2e-42 MATDKNSDDLVSRRMNAQDDDPEATAQFDAFPRESTPEKPSMLSDEEWALLSDGAAKKDS ETTETSSAKDTKDTHESAPTRETSVKRQHSSARQAERDEPTRIMPAPAPAGSSPATTTTS GTSAVAATTSAAKPGLYHRFGFLDFIATAIIVASMPFMLVALAVKIAASGMFLRFEYFIS PWFPKDEYGFHSDDRLHYASYVTDYLFNGDSSRYLADVVFPDGTPVFTDGEIAHMADVKG LVTLLAFIAIVGVILSLISAVYLGRKYGPGLHHALRWSGIVTLALFAVLTVLALVGWDRF FTGFHDMFFASGTWQFYLDDSLIRLFPPQFWIDAGIFVAGFVVLVSILFIALSRIGHKKR KLARDAAKKA >gi|294971285|gb|ADNU01000043.1| GENE 109 114828 - 115730 1157 300 aa, chain - ## HITS:1 COG:Cgl2657 KEGG:ns NR:ns ## COG: Cgl2657 COG2326 # Protein_GI_number: 19553907 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 7 300 13 306 306 387 64.0 1e-107 MHPHQKENLREYIDKLRTEGYTVVNGHTPDPDLIDPGGRAVETWREGYPYDTLMTRSEYE QEKYKLQIELLKFQYYGQDHGLRHVLVFEGRDAAGKGGTIKRFTEHLNPRAARVVALNKP TEQESGQWYFQRYVKHLPTRGEIVMFDRSWYNRANVERVMGFCTDSQYEEFMVQAPLFEK MLVESGIHLTKFWFSVTEHEQRTRFAIRQIDPVRQWKLSPMDLESLGRWDDYTEAKEQTF LRTDTDHAPWITVKSNDKKRARLNAMRYFLNSVEYEDKDTSVVYPPDPKIVIRGRDAVGD >gi|294971285|gb|ADNU01000043.1| GENE 110 115788 - 116360 601 190 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395859|ref|ZP_06806047.1| ## NR: gi|295395859|ref|ZP_06806047.1| hypothetical protein HMPREF0183_1545 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1545 [Brevibacterium mcbrellneri ATCC 49030] # 1 190 1 190 190 330 100.0 4e-89 MKLTPHRALLAVTSACLALALASCGGGDEQPSNPNPAKKPLATSAPPAPEPNGDEADPEA YRGTVAGTENAYYFSNADRSYSCTIGETFVGCNSKNLPDDVPELKNTYGQKEKANSVAMD YGKAAKFQATSNPTYTYLATEHAPEGGQELPAGVKLTAHDTTCTVTDDGGVSCTHKDHGF TVTPKKADLH >gi|294971285|gb|ADNU01000043.1| GENE 111 116387 - 118444 1722 685 aa, chain - ## HITS:1 COG:SMb21446 KEGG:ns NR:ns ## COG: SMb21446 COG1523 # Protein_GI_number: 16265023 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Sinorhizobium meliloti # 16 682 15 690 698 648 50.0 0 MTEQNSRVSVGKSWPLGVTLTETGANVAVWAPDATLVELCVFTDAEEQRIPVPYRDGGVW YAHVEGITEGTRYGLRAAGPHQPENGLRFNPAKLLIDPYAQVLTGPLSWDCLMRAYAVGP GDDMVQDDRDSAPVVPKAIVQGPPQGPDPSLNRPIRPWNETVIYEAHVKGLTQQHPDIPE DIRGTYAALAHPVVVEHLKKLGVTALELLPIQAFIDDEFLVRQGKSNYWGYQPIAWQAPE PRYAYRDADTEIRQAVHTLHEAGIEVILDIVFNHTGEGSEMGPTLSCRGLNNPGYYQLTD GGRHYVDVTGTGNSLNPDADMVMRLVLDSMRHWVTRYGIDGFRFDLASTLGRTEDRFTPN SPFFYTVRQDPLLAGVKLIAEPWDLGIDGYQLGHYPYPWKEWNDSYRDKVRRAWRGESLG TTDMGSCLTGSANLFDHSGRSASSSINFVTAHDGFTLNDVVSYNNKHNEANGEDNRDGHN ENVSDNMGAEGLTEDPAINKARERRIRGMLATLFVSQGVPMLLAGDELRNSQGGNNNAYA QDNEIGWVDWSHRSEVEFISRLSAMRKRLPLLRQRNFLHGGTREDGEIDIQWFKANGQTP TDDDWHSSELTTLGVEIRGVAGYRSGEELTGSVFLIINVGDETNVALPPQISWHLELDSA HEDAHGDFTEHYVAPAQSVIVLSSP >gi|294971285|gb|ADNU01000043.1| GENE 112 118441 - 119880 994 479 aa, chain - ## HITS:1 COG:SMc03924 KEGG:ns NR:ns ## COG: SMc03924 COG0297 # Protein_GI_number: 15966599 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Sinorhizobium meliloti # 5 479 3 478 480 434 48.0 1e-121 MARRVLSVASESAPLVKTGGLADVVGALPSALRPLGWESRVLMPAYPGLTDRLESTSVQW ETDDLFGGPARVLLGTFNDVEYLLLDAPHFFDREGGPYNVDGHDYPDNHVRFAALSWVGS RLAVEGTTDGWVPEVVHAHDWQAGLVPSYLKYAGTPVPSVMTLHNIAFQGIFGPDQLDRV NLPTWDFHPDALEYHGTVSALKAGMVHASAVNTVSPSYAQQIASPEWGFGLDGVIRMRAD RGEMFGILNGIDLRVWDPENDPHVVPYSASSQEGKKKNRKALVAEFGLAKPQGPLAVVVT RLAHQKGIDMLIDAVPDYVARGGSLAVLGSGDPGYESALHDLARRFPGSVGVQIGYDEPL SHRMYAGGDSVLVPSRFEPCGLTQMYGLRYGAVPIVAATGGLKDSVAHASAENIENKTAT GITFSDISTHGLSEALAYSTELFAQKKVWRSILRKGMRTPVGWESSARVYADIFEGVTA >gi|294971285|gb|ADNU01000043.1| GENE 113 119880 - 121178 1150 432 aa, chain - ## HITS:1 COG:AGl1560 KEGG:ns NR:ns ## COG: AGl1560 COG0448 # Protein_GI_number: 15890896 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 425 9 417 420 608 69.0 1e-174 MSPTSVIGDSRGAAPRLTSQAMAFVLAGGRGSRLQELTDRRAKPAVHFGGKSRIIDFPLS NAVNSGIRKIAVATQYKAHSLIRHLQRGWGFFRAERNEYLDILPASQRVAETKWYMGTAD AVTQNIDIVDDYNVEYIIVLAGDHVYKMDYEIMLRQHVETGADVTVGCLTVPREEASAFG VMHTNETGRIIDFLEKPADPPGMPDDPDLALASMGIYVFKWSFLRELLLEDADNVDSSHD FGHDLIPHIVQNGFAQAHKFSDSCVMGGLETEPYWRDVGTIDSFWQTNIDLTDFIPALDM YDNSWPIWTYSELTPPAKFIHDDEGRRGQAIQSLISGDCIISGSDVRHSLLFTGSRVHSY SSLERVVALPRVQINRSAQLTDCVLDSRVVIPEGLVVGQDPEEDARWFRRTDSGVVLITQ PMLDRRATELRL >gi|294971285|gb|ADNU01000043.1| GENE 114 121175 - 123388 1579 737 aa, chain - ## HITS:1 COG:PA2153 KEGG:ns NR:ns ## COG: PA2153 COG0296 # Protein_GI_number: 15597349 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Pseudomonas aeruginosa # 21 727 14 723 732 747 53.0 0 MARDITSDSNGVTEVGPAPAEIQAVVEGRHWDPFSVLGPSADQSTIVAHIPGAERVWAVN DSEAQELEPYASVPTVFHGPYVPYYRLRIQWPGGHVEERHDPYRFSPVLGEIDEYLLSEG THHQLWRALGAHLITHEEVPGVHFAVWAPNAKRVSVVGNFNSWDHTAHPMRSRGATGVWE LFIPGLGAGETYKYSILGDNGQLPLKADPVGFGSEHAPHTASVVRDIDAHTWTDSDWLEV RGEAFATSAPVSIYEVHLGSWKRVSDEHGERFMSYRELAEELVDYAHHMGFTHIEIMPVS EHPFDGSWGYQPIGLYAPTIRYGTPEEFQAFVDAAHARGLGVIADWVPGHFPTDSHGLGN FDGTALYEHADPRQGFHPDWNTLIFNYGRPEVLSYLVSNALYWLSEYHLDGLRVDAVASM IYLDYSRKDNEWVPNRDGGRENYEAINFLQRTNTAAYGADDSVAIVAEESTAFPGVTKPV HTGGLGFGYKWNLGWMNDSLEYFAKDPVYRKYHQNQLTFGMTYAYSENYVLPISHDEVVH GKGSMYQRMPGSHEDKLGNLKLFYAYMWAFPGKKLLFMGQEFGQHHEWNHSASLDWNTLD DPGHAGVQNVVRDLNLFYRDQPAMHALDTDPRGFQWLLLEAVDDQVIAWMRRGNPGDPHV VVVLNCTPVERTNYRIAFPVPGRWHEALNTDSSHYGGANRGNCGAIDTEPVPCGTEAQSA LLTLPPLTAIYFVEDQS >gi|294971285|gb|ADNU01000043.1| GENE 115 123516 - 125954 2352 812 aa, chain - ## HITS:1 COG:mlr7586 KEGG:ns NR:ns ## COG: mlr7586 COG0058 # Protein_GI_number: 13476302 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Mesorhizobium loti # 33 808 46 836 838 800 51.0 0 MSERLQVHNVDTDALELPEITAEGFRTSLLHHLQYSVGSDPEHASKFDWRIALSYAVRDR AISPWFRATRTTWDTDHKRVYYLSMEFLTGRLLEDTAINLGIFTIVNEALTSLGLDFHDI AEDEPDPALGNGGLGRLAACYLESTATLACPAYGYGIRYEHGLFKQGFDHGVQIETPEDW QANDSPWNFTRPEAAYRVLFGGHLEEENGATIWVPEQHVVAESHDTPIVGYGGNWANTLR LWAAKPSAKYFDLNQFNAGHLARASFAEALARSLSRVLYPNDTTDTGKELRLRQEYFLTS ASVQDILRRFLATHDDLRKLPDFAAIQMNDTHPAIAGPELIRLLIDDHGFEFETAADIAT QVLGYTNHTLLPEALERWSVDLMRHVLPRHMDLIEKIQHREIELHGPLEPATAILDNGHV NMGSLAFLTSHRVNGVSALHTDLIRSDLFPDFNERHPERILNVTNGVTPRRWLKLANPDL AALITEAIGEEWETDLDRLTQLAEYADNDDFLTVFGETKHAAKNRLADWLNHHHDIDIPV TGLFDVQVKRIHEYKRQLLNIFWTIARWQRIKRDPSAGWVPRVKLFGGKAAQSYVMAKDI IRLINDVAAVVNNDPDTKDLLQVVFPPNYNVSMAEKLIPAADLSEQISTAGMEASGTGNM KFALNGALTIGTLDGANVEIREKVGAENFFLFGLTTEEVAQRREEPGHSRAAIEASQPMR DILQAVAEGTFSPDEPHRYGNLVDSMWNSDWFLVASDFDSYDEAQTRVDEAYQDTRAWQK ASVLNIANMGYFSSDRSVREYMAKIWNIDSAL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:44:41 2011 Seq name: gi|294971280|gb|ADNU01000044.1| Brevibacterium mcbrellneri ATCC 49030 contig00048, whole genome shotgun sequence Length of sequence - 3658 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 5 - 187 93 ## gi|295395866|ref|ZP_06806053.1| conserved hypothetical protein + Term 221 - 258 5.1 - TRNA 256 - 328 79.9 # Asn GTT 0 0 - Term 208 - 245 5.1 2 2 Tu 1 . - CDS 291 - 593 76 ## + Prom 356 - 415 3.4 3 3 Tu 1 . + CDS 467 - 2263 1439 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 2368 - 2403 3.2 + Prom 3068 - 3127 4.4 4 4 Tu 1 . + CDS 3147 - 3657 327 ## gi|295395869|ref|ZP_06806056.1| conserved hypothetical protein Predicted protein(s) >gi|294971280|gb|ADNU01000044.1| GENE 1 5 - 187 93 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395866|ref|ZP_06806053.1| ## NR: gi|295395866|ref|ZP_06806053.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 60 2 61 61 112 98.0 9e-24 MFGEFVGAGVVNELCVTVASWIVAGEAPRIAHSEAEHPTRMTLTSVLRQGSEIFLRYVLK >gi|294971280|gb|ADNU01000044.1| GENE 2 291 - 593 76 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHRGAHSRRRSGSPVDVRQGPPECLPGRTDFLRQASTLRELTRRPSGVGETLQPFSVRLK KHLYEPRGASILSSFKKLLLLILVLSTIFLRSSVGRAFDC >gi|294971280|gb|ADNU01000044.1| GENE 3 467 - 2263 1439 598 aa, chain + ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 3 598 1 599 600 471 42.0 1e-132 MSVREASTPVEENLSYPASIPAVLVERLRDYPNDVYCERRGASGMFEQITVRDYARDVFT TARGLIAHGLKPGDRVGLMGNTSYDWVVCDLAIMCAGGVVVPIYQTSSTRQVEWIAENSD LTALIVESEEYANVTAPVVEKLSLDLHVIDRGDVKRLQGAANETPQDEVDTRIHALQPDD IATIVYTSGTTGNPKGALLSHANFMHHAVNGVENPALGGTVLAGQDSRILMFLPLSHVFG RFIEFVCLYSRCVVGYTPSMKTVVDDLGDFKPTWLLAVPRVFETVFNKARNAGKLQKMIF DWASRVAHAYSVAQDRGGPGLGLKAQHAVADAVVFSKLRKALGGDVEYAICGGAPLGQWL GHFYRGLGIHILEGYGATETAAPTSVNLPGHLKVGTVGTAFPGASLRVVESGEIQIKGPH VFRGYLDNPEATEEAFDDGWYKTGDLGKLDDEGYLTVTGRVKELLVTAGGENVQPAVLED SLRRHTLISEVVVVGDRERFVGAMITLDGEMLPGWLKTHGLPAMSIEEAGRHPKVREALD VAVKYANENVNRAQSIRKYVVLPRDLEQTKDELSASLKVRRPVVMKNFAREYAALYDK >gi|294971280|gb|ADNU01000044.1| GENE 4 3147 - 3657 327 170 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395869|ref|ZP_06806056.1| ## NR: gi|295395869|ref|ZP_06806056.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 12 170 1 159 160 284 100.0 2e-75 MTTTDHHVRNDMYDGPAVELFETVKTTTRLMDEARVKQAEAVASLISAHVTPVDDFTDGM HAVFTSNPGVGPLVTNGKAGQSSGVQTSVGVDDVVACVALPSGEVCTVASVERVPDELPT PTEGVLAKVLDCTRAQVVTQVRKIMTAVVLMPKLWSLARQGVIGFDRVLY Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:45:05 2011 Seq name: gi|294971272|gb|ADNU01000045.1| Brevibacterium mcbrellneri ATCC 49030 contig00049, whole genome shotgun sequence Length of sequence - 7865 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 3, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.000 + CDS 64 - 459 322 ## COG2873 O-acetylhomoserine sulfhydrylase 2 1 Op 2 . + CDS 440 - 1507 756 ## COG2021 Homoserine acetyltransferase + Term 1563 - 1613 -0.7 - Term 1474 - 1512 -0.3 3 2 Op 1 7/0.000 - CDS 1515 - 3557 1502 ## COG1960 Acyl-CoA dehydrogenases 4 2 Op 2 . - CDS 3554 - 4153 291 ## COG1309 Transcriptional regulator - Prom 4183 - 4242 2.4 + Prom 4125 - 4184 2.0 5 3 Op 1 10/0.000 + CDS 4214 - 5494 1245 ## COG0183 Acetyl-CoA acetyltransferase 6 3 Op 2 7/0.000 + CDS 5504 - 6856 182 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 7 3 Op 3 . + CDS 6856 - 7683 586 ## COG2030 Acyl dehydratase + Term 7686 - 7739 -1.0 + TRNA 7772 - 7862 64.1 # Leu GAG 0 0 Predicted protein(s) >gi|294971272|gb|ADNU01000045.1| GENE 1 64 - 459 322 131 aa, chain + ## HITS:1 COG:MT3443 KEGG:ns NR:ns ## COG: MT3443 COG2873 # Protein_GI_number: 15842936 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Mycobacterium tuberculosis CDC1551 # 3 130 310 437 449 164 68.0 3e-41 MENAQKVATFLENHDQVTHVNYAGLESSPYNSLAKQLLPKGAGAVLSFDIAGGYDAAVKF VDALDLHSHVANIGDARSLVIHPASTTHSQLSEEAQAKSGVNPALVRLSVGLEGVDDIIA DLEKGFAAARS >gi|294971272|gb|ADNU01000045.1| GENE 2 440 - 1507 756 355 aa, chain + ## HITS:1 COG:ML0682 KEGG:ns NR:ns ## COG: ML0682 COG2021 # Protein_GI_number: 15827287 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Mycobacterium leprae # 14 354 13 368 382 266 45.0 5e-71 MRPHAVKSPLTHGADGTVRTCCIGDFVTENGDVIPDAHIAFETFGTLNAQGTNAILIEHA LTGDSHVTAGASDTSGWWEDVVGPGKAIDTREFFVVCTNVLGGCNGSTGPSTPVDDIELG AAFPQVSIRDMVRAEALVADALGIERFYAVVGGSLGGARATEFAATQPHRVERTVVLAAP AYSSADNIAWAHTQLQAIQLDPNYHGGNYAHHSVKPLYGLGLARQIAHLTYRSGDELDGR FGREHQPSMPGYYQVQSYLDYQAGKLVGRFDAQSYCVLTRALRDHDVRRGRSQLTVPGLH VVSLSSDRLYPPSQVKELAGLAGAHSYTEVETDAGHDGFLTESAEVSKILRSVLG >gi|294971272|gb|ADNU01000045.1| GENE 3 1515 - 3557 1502 680 aa, chain - ## HITS:1 COG:YGL205w KEGG:ns NR:ns ## COG: YGL205w COG1960 # Protein_GI_number: 6321233 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Saccharomyces cerevisiae # 94 443 140 506 748 190 36.0 7e-48 MNAKAPLSVDVDYLRRFLEGDRASVREKGREFAAHSALRLKPEWSLERKRQATLEGVVAL ANAGFTTLSMPKHLGGPEDYASYVAGFEELVLAEPSIQIKAGVQYGLFSGAIHHLGNKEQ HARWLKDALEGKLLGSFAMTEIGHGSDVANVDTTATYDPAKQEFVIHTPHRQAVKEYIGN AAAHAQAAVVFARLITSGIDYGVHAFFVPVRSEGGRPLPGVTIEDDGYKGGLAGVDNGRF GFDQVRIPRENLLDRYGHVAEDGEYSSPIHSPGKRFFTMLGTLVMGRVSLDGASTVASKL ALDIALRYAVHRKQFEGGVPGESVHLMDYGEHQRRLMPLVAKAWANSVAHENLLDTFDEV FSSEAPPEATRQLLESQAAGFKAVSTWDALDTIQECREACGGAGFMWDNRLVGLRHDLDV YVTFEGDNTVLLQLVGKRLLQDYSRELKDIDFGGAARYLSHQAAEHSLYRSGIASMGRTI GDLFTPALASKRIRSGQLQEALLSSRVDSMLSDLAQKLRPAAKMDRQAAADLFNAHQHQL IQTAEAYIHLLKWKALTARLRAIDTTEHPDEAKMLRRIRDLYGLTLIHEHIGWHVMYGRL SMARARMVEPTIGRLCRKLAQNAQDLADMFGFTSEHRRTQISEGQEAARQNEATAHARQA RSRTDYPIDERIIRAKKKKS >gi|294971272|gb|ADNU01000045.1| GENE 4 3554 - 4153 291 199 aa, chain - ## HITS:1 COG:MT0489 KEGG:ns NR:ns ## COG: MT0489 COG1309 # Protein_GI_number: 15839861 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 3 170 31 208 256 75 30.0 8e-14 MKSVTQDGRALRWDAHRRERRRELLRMVRHSVADLGPDASMDQICEATGTSKTVLYRYFG DRAGLVDDMGKWAMKVITQQLDRAATPDMSPREALTHMITAFVDLASSRPHVYRFCDRGV TNQTGQQTFFDSIAQLLCARMNFTQPEQYMWARGALGFVRACTDEWLTNPTDPHTFATHL STWLWKSAPATNDVEGKQS >gi|294971272|gb|ADNU01000045.1| GENE 5 4214 - 5494 1245 426 aa, chain + ## HITS:1 COG:PA4785 KEGG:ns NR:ns ## COG: PA4785 COG0183 # Protein_GI_number: 15599979 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 3 424 5 424 425 496 62.0 1e-140 MNRRAAILGGNRIPFARSNKQYAHASNQDMLTSALDGLVARFGLADKRLGEVAGGAVLKH SKDINLTRESVLGSALSPTTPAFDLGQACATGLEACVSISQKIRLGQIESGIAGGTDTTS DAPIVVSEGLRENLLALSRARTIPQKLQAIARIRPQDFAPVAPSTAEARTGLSMGEHQAR TTAHWGITREAQDELALASHTNMAAAWDRGFFDDLVTPYLGVTRDTNLRADSTMESLAKL NPVFGRNLETEATMTAGNSTPLTDGASTVLLGSEEFAAELGIEPLAYLVDAEAAAVDFVE GEEGLLMAPTYAVPRLLARSGLTFEDIDVFEIHEAFASTVLCHLAAWESEEFCTQKLGLD APLGTVDRAKLNPNGSSLAAGHPFAATGGRIVAQTAKHLKETGQKRALISICAAGGQGVA AIVEAD >gi|294971272|gb|ADNU01000045.1| GENE 6 5504 - 6856 182 450 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 214 448 4 242 242 74 28 2e-13 MVKDTYLNLANGALAPVVKKLGLPQPVPLRRFNVAGGSGFTKDPVLVLGDSAADTVAELL LENGFSVHRSADPSFKYQGIIASFIDAQSPDDLGDTVLQISPALKQTARCARVVVLSRAP EGEQPSVDAARNGVTGIVRSVAHEMRYGGTANGIVLGSGVDVNAASVTGALWFLLSAKSA YVSGQLLTVGDDRGQAVTSDEFDGVRENGPLAGKVAVVTGAARGIGAAIARTLHRDGAYV YGVDVPQAGQALAATMNSVSGKAIHLDITAEDAAAKIAQAVGKPIDILIHNAGITRDKLL ANMDTSRWNSVIAVNIESQLRMNEKLTELGAWGSQPHVVSLASTSGIAGNRGQTNYAASK AGVIGMVAASQDKFAQLGGSINAVAPGFIETDMTAKMPTLTRQVARRLSSLQQGGLPEDV AEAIAFLASPAATGVNGQTLRVCGQNMVGA >gi|294971272|gb|ADNU01000045.1| GENE 7 6856 - 7683 586 275 aa, chain + ## HITS:1 COG:PA4788 KEGG:ns NR:ns ## COG: PA4788 COG2030 # Protein_GI_number: 15599982 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Pseudomonas aeruginosa # 24 268 32 276 285 116 31.0 5e-26 MGSTLNVYGRAVLGTVKKPKPGPVPQRTLTRTVTIDPDAVARFNTVTELPVNNDVPAPYL HTLGFGPSLELMTAPDFPVPVLGMVHVYNRFTQHAKVPMGAEVTLQISVSRPRARDAGSE LDVIVHGSVDGKAVFEDVSTYFAKKTKLPEADEPAPARRLDLPEGSAVATWTFPAGLGER YARVSGDYNVIHLNSLIAKAFGFPRTIAHGMYTASKAFAQSGVSAEAFVWDVQFAKPIFL PGRANVVVDRTDGVRVGVVRPKDGAPHLVSLVRDA Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:45:47 2011 Seq name: gi|294971151|gb|ADNU01000046.1| Brevibacterium mcbrellneri ATCC 49030 contig00050, whole genome shotgun sequence Length of sequence - 133015 bp Number of predicted genes - 121, with homology - 120 Number of transcription units - 64, operones - 29 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 46 - 1977 345 ## ROP_10770 hypothetical protein + Term 2026 - 2072 1.3 2 2 Tu 1 . - CDS 2098 - 3075 688 ## jk0324 hypothetical protein - Prom 3114 - 3173 3.3 + Prom 3090 - 3149 5.1 3 3 Op 1 . + CDS 3177 - 3731 463 ## COG1309 Transcriptional regulator 4 3 Op 2 . + CDS 3774 - 4268 505 ## COG0824 Predicted thioesterase 5 3 Op 3 . + CDS 4329 - 5216 744 ## RSal33209_0522 hypothetical protein 6 3 Op 4 4/0.045 + CDS 5294 - 6502 1078 ## COG0438 Glycosyltransferase 7 3 Op 5 . + CDS 6514 - 7908 1232 ## COG0477 Permeases of the major facilitator superfamily 8 4 Tu 1 . + CDS 8022 - 9248 1013 ## Krad_4323 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) - TRNA 9259 - 9332 86.5 # Met CAT 0 0 + Prom 9347 - 9406 1.6 9 5 Tu 1 . + CDS 9457 - 9951 467 ## Xcel_2142 hypothetical protein 10 6 Tu 1 . - CDS 9966 - 10754 347 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 11 7 Tu 1 . + CDS 10924 - 11529 389 ## HMPREF0573_10610 putative multidrug resistance efflux pump - Term 11388 - 11422 0.0 12 8 Op 1 8/0.000 - CDS 11532 - 12692 705 ## COG0438 Glycosyltransferase 13 8 Op 2 . - CDS 12705 - 13913 1180 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 13941 - 14000 2.0 + Prom 13883 - 13942 3.5 14 9 Tu 1 . + CDS 14086 - 15405 1185 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 15 10 Tu 1 . - CDS 15389 - 16330 844 ## COG3238 Uncharacterized protein conserved in bacteria - Prom 16358 - 16417 2.4 16 11 Tu 1 . + CDS 16356 - 16991 447 ## COG0406 Fructose-2,6-bisphosphatase 17 12 Tu 1 . - CDS 17004 - 17828 1098 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 17853 - 17912 1.7 + Prom 17812 - 17871 2.9 18 13 Tu 1 . + CDS 17895 - 18791 668 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 18910 - 18946 1.2 19 14 Tu 1 . - CDS 18817 - 19143 520 ## gi|295395897|ref|ZP_06806082.1| conserved hypothetical protein 20 15 Op 1 . + CDS 19181 - 19744 523 ## SGR_5838 hypothetical protein 21 15 Op 2 . + CDS 19745 - 20521 449 ## Namu_2778 hypothetical protein 22 16 Op 1 . + CDS 20639 - 21814 788 ## COG0215 Cysteinyl-tRNA synthetase 23 16 Op 2 . + CDS 21811 - 22476 562 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 22494 - 22533 -0.9 24 17 Tu 1 . - CDS 22427 - 23263 338 ## COG2887 RecB family exonuclease - Prom 23324 - 23383 2.2 25 18 Tu 1 . + CDS 23342 - 24496 1133 ## COG1994 Zn-dependent proteases 26 19 Op 1 1/0.182 + CDS 24643 - 25557 708 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases 27 19 Op 2 . + CDS 25554 - 27104 1599 ## COG0464 ATPases of the AAA+ class - Term 27059 - 27087 -0.1 28 20 Tu 1 . - CDS 27138 - 27521 424 ## Mmcs_0167 putative transmembrane protein 29 21 Op 1 . + CDS 27529 - 29079 1444 ## Krad_1871 hypothetical protein 30 21 Op 2 . + CDS 29081 - 29269 253 ## gi|295395908|ref|ZP_06806093.1| conserved hypothetical protein 31 21 Op 3 3/0.091 + CDS 29266 - 30063 797 ## COG0638 20S proteasome, alpha and beta subunits 32 21 Op 4 . + CDS 30060 - 30791 639 ## COG0638 20S proteasome, alpha and beta subunits 33 21 Op 5 . + CDS 30788 - 32248 1059 ## Mmcs_2467 protein of unknown function DUF245-like protein 34 21 Op 6 . + CDS 32272 - 33207 942 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 35 21 Op 7 4/0.045 + CDS 33207 - 34178 776 ## COG2378 Predicted transcriptional regulator 36 21 Op 8 . + CDS 34171 - 35046 760 ## COG2378 Predicted transcriptional regulator 37 21 Op 9 . + CDS 35075 - 35329 311 ## gi|295395915|ref|ZP_06806100.1| sec-independent protein translocase TatA/E-like protein 38 21 Op 10 4/0.045 + CDS 35356 - 36111 868 ## COG0805 Sec-independent protein secretion pathway component TatC 39 21 Op 11 . + CDS 36136 - 38820 2032 ## COG4581 Superfamily II RNA helicase - Term 38638 - 38676 1.3 40 22 Op 1 . - CDS 38850 - 41102 2015 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 41 22 Op 2 . - CDS 41102 - 42712 1122 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) 42 23 Op 1 . + CDS 42753 - 43679 421 ## SAV_6922 hypothetical protein 43 23 Op 2 . + CDS 43690 - 44442 411 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 44 24 Tu 1 . - CDS 44426 - 44767 335 ## Bfae_15950 hypothetical protein - Prom 44803 - 44862 2.1 45 25 Tu 1 . + CDS 44877 - 45152 187 ## gi|295395923|ref|ZP_06806108.1| conserved hypothetical protein + Prom 45180 - 45239 2.3 46 26 Op 1 . + CDS 45278 - 46081 473 ## Xcel_2728 transglycosylase domain-containing protein 47 26 Op 2 . + CDS 46116 - 46955 613 ## COG0797 Lipoproteins + Term 47056 - 47096 -0.7 48 26 Op 3 . + CDS 47148 - 47597 637 ## COG0071 Molecular chaperone (small heat shock protein) + Term 47636 - 47681 13.1 - Term 47624 - 47668 9.9 49 27 Op 1 . - CDS 47670 - 48263 331 ## COG0500 SAM-dependent methyltransferases - Term 48287 - 48327 5.4 50 27 Op 2 . - CDS 48398 - 49375 576 ## Arch_0128 endonuclease/exonuclease/phosphatase 51 28 Tu 1 . + CDS 49425 - 50657 1050 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 50809 - 50842 -0.8 - Term 50446 - 50488 3.2 52 29 Op 1 . - CDS 50671 - 51165 352 ## COG0242 N-formylmethionyl-tRNA deformylase 53 29 Op 2 . - CDS 51158 - 54559 3059 ## COG1038 Pyruvate carboxylase + Prom 54555 - 54614 5.6 54 30 Op 1 28/0.000 + CDS 54720 - 55826 458 ## COG0420 DNA repair exonuclease 55 30 Op 2 . + CDS 55823 - 58798 1180 ## COG0419 ATPase involved in DNA repair 56 30 Op 3 . + CDS 58884 - 59951 801 ## COG1192 ATPases involved in chromosome partitioning - Term 59951 - 59991 6.2 57 31 Tu 1 . - CDS 60026 - 60589 506 ## COG0789 Predicted transcriptional regulators - Prom 60642 - 60701 2.5 - Term 60759 - 60801 -0.8 58 32 Tu 1 . - CDS 60825 - 61580 448 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 59 33 Op 1 . + CDS 61566 - 62345 346 ## COG1647 Esterase/lipase 60 33 Op 2 . + CDS 62342 - 62755 305 ## gi|295395938|ref|ZP_06806123.1| conserved hypothetical protein + Term 62795 - 62835 -0.8 + Prom 62764 - 62823 2.0 61 33 Op 3 . + CDS 62851 - 64533 633 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 62 34 Tu 1 . - CDS 64483 - 65562 791 ## COG0547 Anthranilate phosphoribosyltransferase - Prom 65747 - 65806 2.3 + Prom 65728 - 65787 2.2 63 35 Op 1 4/0.045 + CDS 65889 - 66425 603 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 64 35 Op 2 4/0.045 + CDS 66464 - 67249 716 ## COG2010 Cytochrome c, mono- and diheme variants 65 35 Op 3 28/0.000 + CDS 67288 - 68337 960 ## COG0723 Rieske Fe-S protein 66 35 Op 4 . + CDS 68334 - 69965 1511 ## COG1290 Cytochrome b subunit of the bc complex + Term 69996 - 70057 22.6 - Term 70574 - 70615 12.5 67 36 Op 1 . - CDS 70632 - 71033 468 ## AARI_16690 cytochrome aa3 subunit 4 (EC:1.9.3.1) 68 36 Op 2 25/0.000 - CDS 71030 - 72742 1559 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 69 36 Op 3 . - CDS 72742 - 73632 934 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 - Term 73705 - 73739 -1.0 70 37 Op 1 . - CDS 73747 - 74385 279 ## COG2360 Leu/Phe-tRNA-protein transferase 71 37 Op 2 . - CDS 74423 - 74764 391 ## COG0316 Uncharacterized conserved protein 72 37 Op 3 . - CDS 74845 - 76263 1217 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 73 38 Tu 1 . + CDS 76276 - 76893 650 ## Lxx15070 hypothetical protein + Term 76957 - 77001 0.0 74 39 Tu 1 . - CDS 76868 - 78049 961 ## COG0167 Dihydroorotate dehydrogenase 75 40 Tu 1 . + CDS 78004 - 79464 1482 ## COG0260 Leucyl aminopeptidase + Term 79503 - 79554 12.2 + Prom 79565 - 79624 1.7 76 41 Op 1 30/0.000 + CDS 79645 - 81036 741 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 77 41 Op 2 . + CDS 81052 - 82851 2020 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 82862 - 82913 11.2 - Term 82852 - 82898 9.2 78 42 Tu 1 . - CDS 82910 - 83641 183 ## gi|295395956|ref|ZP_06806141.1| conserved hypothetical protein - Prom 83713 - 83772 3.2 + Prom 83659 - 83718 3.6 79 43 Op 1 13/0.000 + CDS 83743 - 84435 661 ## COG0321 Lipoate-protein ligase B 80 43 Op 2 . + CDS 84450 - 85490 778 ## COG0320 Lipoate synthase 81 43 Op 3 . + CDS 85521 - 86255 862 ## Arth_1603 integral membrane protein - Term 86055 - 86095 0.7 82 44 Tu 1 . - CDS 86257 - 86706 395 ## Arth_1601 RDD domain-containing protein - Prom 86829 - 86888 2.0 + Prom 86756 - 86815 2.0 83 45 Op 1 . + CDS 86843 - 88267 1474 ## COG0174 Glutamine synthetase + Term 88309 - 88342 5.2 84 45 Op 2 . + CDS 88345 - 89787 404 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 90008 - 90041 -0.2 - Term 89684 - 89727 -0.9 85 46 Tu 1 4/0.045 - CDS 89784 - 92696 1955 ## COG1391 Glutamine synthetase adenylyltransferase 86 47 Op 1 . - CDS 92774 - 94111 1126 ## COG0174 Glutamine synthetase 87 47 Op 2 . - CDS 94108 - 94302 271 ## gi|295395965|ref|ZP_06806150.1| conserved hypothetical protein + Prom 94367 - 94426 2.0 88 48 Op 1 . + CDS 94474 - 95589 1208 ## COG0686 Alanine dehydrogenase 89 48 Op 2 . + CDS 95654 - 96523 725 ## COG0024 Methionine aminopeptidase 90 48 Op 3 . + CDS 96536 - 97318 582 ## COG1940 Transcriptional regulator/sugar kinase + Term 97535 - 97565 -0.5 91 49 Tu 1 . + CDS 97723 - 98430 473 ## COG3022 Uncharacterized protein conserved in bacteria - Term 98262 - 98294 1.7 92 50 Op 1 . - CDS 98435 - 99157 643 ## gi|295395970|ref|ZP_06806155.1| possible Zn-ribbon protein 93 50 Op 2 . - CDS 99141 - 100025 762 ## COG0327 Uncharacterized conserved protein - Prom 100159 - 100218 3.5 + Prom 99973 - 100032 2.4 94 51 Tu 1 . + CDS 100149 - 101663 1491 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 101681 - 101732 15.6 95 52 Tu 1 . - CDS 101700 - 102380 316 ## COG2258 Uncharacterized protein conserved in bacteria - TRNA 102428 - 102504 90.6 # Pro CGG 0 0 96 53 Tu 1 . - CDS 102568 - 104424 1531 ## COG2217 Cation transport ATPase 97 54 Op 1 11/0.000 + CDS 104495 - 104995 378 ## COG1309 Transcriptional regulator 98 54 Op 2 . + CDS 105050 - 106660 1273 ## COG0477 Permeases of the major facilitator superfamily + Term 106894 - 106941 -0.2 99 55 Tu 1 . - CDS 106704 - 108212 1359 ## COG0477 Permeases of the major facilitator superfamily - Prom 108269 - 108328 3.9 - Term 108451 - 108486 7.9 100 56 Tu 1 . - CDS 108523 - 110514 2029 ## Bcav_3875 hypothetical protein - Prom 110595 - 110654 2.1 + Prom 110554 - 110613 3.3 101 57 Op 1 8/0.000 + CDS 110692 - 111963 993 ## COG4558 ABC-type hemin transport system, periplasmic component 102 57 Op 2 10/0.000 + CDS 112176 - 113177 954 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 103 57 Op 3 . + CDS 113174 - 114025 793 ## COG4559 ABC-type hemin transport system, ATPase component 104 57 Op 4 . + CDS 114022 - 115386 1026 ## Amir_2876 hypothetical protein 105 57 Op 5 . + CDS 115383 - 117569 1499 ## Bcav_3875 hypothetical protein 106 57 Op 6 . + CDS 117627 - 118283 534 ## COG5398 Heme oxygenase - TRNA 118346 - 118422 87.0 # Val TAC 0 0 - Term 118294 - 118339 4.2 107 58 Op 1 . - CDS 118490 - 118879 401 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 108 58 Op 2 . - CDS 118951 - 119442 292 ## COG1225 Peroxiredoxin 109 58 Op 3 . - CDS 119442 - 119870 546 ## KRH_10820 hypothetical protein - Prom 119910 - 119969 1.6 110 59 Op 1 . + CDS 119794 - 120006 120 ## 111 59 Op 2 . + CDS 120116 - 122875 3005 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component + Term 122919 - 122967 19.2 112 60 Tu 1 . + CDS 123010 - 124203 867 ## COG2508 Regulator of polyketide synthase expression 113 61 Op 1 14/0.000 + CDS 124305 - 125219 746 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 114 61 Op 2 6/0.000 + CDS 125240 - 126241 926 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 115 61 Op 3 27/0.000 + CDS 126405 - 126656 466 ## COG0236 Acyl carrier protein + Term 126665 - 126709 10.9 116 61 Op 4 . + CDS 126725 - 127966 1180 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 128014 - 128063 15.2 117 62 Op 1 . + CDS 128176 - 128790 336 ## gi|295395994|ref|ZP_06806179.1| conserved hypothetical protein 118 62 Op 2 . + CDS 128792 - 129619 459 ## Celf_2536 hypothetical protein - Term 129581 - 129635 1.4 119 63 Tu 1 1/0.182 - CDS 129643 - 130551 638 ## COG0583 Transcriptional regulator - Term 130560 - 130607 13.2 120 64 Op 1 11/0.000 - CDS 130624 - 132198 435 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 121 64 Op 2 . - CDS 132256 - 132819 781 ## COG0450 Peroxiredoxin Predicted protein(s) >gi|294971151|gb|ADNU01000046.1| GENE 1 46 - 1977 345 643 aa, chain + ## HITS:1 COG:no KEGG:ROP_10770 NR:ns ## KEGG: ROP_10770 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 391 537 225 392 421 89 33.0 6e-16 MFDDMLTSKRVDVSWKTFKRHVTEVLAMLTTPETRAENAKRNRSVSYWVNDDGTATLSLT GPVLEMEAFYQRVRGTARAIMANHVEPFTATLTDEQQALFVTEDNGEVSEVRVGDLGRVE VDDDRLMDQLTLDLITGAKPSTTLRVRVTRTGKQAPIRVTYTGPDSPSTDGAEVILQNGT QAQGGNATAKGTNSAFEAGIPAADANGADANGGSATDGPGADGPGPGDADGSVWADRCEA KQAEQVCELELCVSMPEKEEWLKSQASITLTVPVLHFLMNNPPPNIGQERSPDGNEEHRP REYENEKHRFEKRRPKRQRSGKDPGPGEHRPEQQDSGRHETKEQTSQNQGSSAPLGTDVP PGAGGSPGADSAAGSELDFGLPVNVDPDVRVPVMMNGRVPLDAKTADEVIAQAKWVYRMF TDPQTGVVLESTPTKYYIPAALKRMVEARHPDCSVPWCAVPARVCEKDHIEPFNHQDPEN GGLTVMENLHPLCKRHHQEKTQKRLRVDKMDDGSLAWVLPRIGAMLVYPPESRINQLHYE RLIEYFDTGDQDISHTINNYLATEQTSAHSQAPSRRTPVQTDRGTGGQTAGSDDGRTVGQ ADGRTDGAVSGYDRAVADEYANAGEVFNGDARPWEPSKEPPPF >gi|294971151|gb|ADNU01000046.1| GENE 2 2098 - 3075 688 325 aa, chain - ## HITS:1 COG:no KEGG:jk0324 NR:ns ## KEGG: jk0324 # Name: not_defined # Def: hypothetical protein # Organism: C.jeikeium # Pathway: not_defined # 23 324 32 332 336 208 47.0 3e-52 MSETAQKTKETSETRKRRQLGPVAITGLVSVIIALMLLAFLTPAIHSGAHDIPLAVSAPE PAKAALTQKIEASGAFKVVDASGPEDAVEKVKNRETVGAISATPTGTEVTIASGAGAPYV AALKGVASQMKAGGQEVTVNDVAPMTEQDPQGMGLASALLPLIFGGMASSVLLATQLKSA SKRTLGAVGVAVLGGLVAAAILQPWFNAVAGSFWLLWAGLSLGILAISSTVLGLFSVMGF GGVGIGAVLMLFVSNPLSGFTAGPHWLPAGWGALGQWMPVGAAGTFLRSAAYFDGRGLGA SPWVLVAWIVAGLFLIAIGARRRKD >gi|294971151|gb|ADNU01000046.1| GENE 3 3177 - 3731 463 184 aa, chain + ## HITS:1 COG:RSp1121 KEGG:ns NR:ns ## COG: RSp1121 COG1309 # Protein_GI_number: 17549342 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 2 154 11 165 197 67 35.0 1e-11 MRSDAQQNREALLSVARTLIAEQGAGVSLRAIAAEAGVGIATLYRHFPTRGDLFLALVMQ MSSEGLAAMDRALEQWDAGPEAAWRTFIIEFAQTHLSAQLVAVAEEDPEFATSERVSSAR ADRLARFDPILVRAREAGLIGDIDAMRLIVGVAAATRPLPAFVEQQIPDLHEWLIDAYIR GIRP >gi|294971151|gb|ADNU01000046.1| GENE 4 3774 - 4268 505 164 aa, chain + ## HITS:1 COG:SMc01638_2 KEGG:ns NR:ns ## COG: SMc01638_2 COG0824 # Protein_GI_number: 15966003 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Sinorhizobium meliloti # 20 152 1 132 145 64 31.0 8e-11 MTLPTFDQVMELPAHADLRVPPEWIDHNEHMNIRHYIDVASLASLTLMEEAGFDSTYRDE HRLSLFTVEHHLRYLAEMTLGERLTGHVYPVKLGSKGVHLVVLVLDRERDQLAMIFETVL LHVDMDARKAVEIPAHVREKALPLFEKAQQLDWSVPLCGVMGIK >gi|294971151|gb|ADNU01000046.1| GENE 5 4329 - 5216 744 295 aa, chain + ## HITS:1 COG:no KEGG:RSal33209_0522 NR:ns ## KEGG: RSal33209_0522 # Name: not_defined # Def: hypothetical protein # Organism: R.salmoninarum # Pathway: not_defined # 6 286 4 289 303 139 35.0 2e-31 MNTTPIALCLAVVSAVALAFGAVFQHRGVNESHATGTKFGVKSFLGMFSNRTWVLGMSIT VVGVICGTLSLALAAVMVVQPVGAISLVISVLIAQRTRNLKLTKRIIASVAWCTVGVGLF VFMSAMVAKPQVQQGAETLPLVWATGVSIAVFTLVKLIIKAPPQLVYVIAGGILFACVAT NTHVVSVQFLTYGLGGITWLNVAAIVLAGLAGSIFVQSAYASGPPELVIAGLTVIDPIVA VFLGAVILGEATDAPVWVVIVMSLIGLSACGAVFILSKYHPDVLRRAELKAQTST >gi|294971151|gb|ADNU01000046.1| GENE 6 5294 - 6502 1078 402 aa, chain + ## HITS:1 COG:CAC3594 KEGG:ns NR:ns ## COG: CAC3594 COG0438 # Protein_GI_number: 15896828 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 19 398 1 380 398 112 27.0 1e-24 MTTELGVTLKEHHAASEPLTICLAAETYAPEVNGAAVFAERLAHGLASRGHSVHVICPSP SGYERSERAGDVWVHYIRSWHWPWHPTWMICMPWWVKPAVKNLIDTIKPDVIHTQAHFVI GRYAIAEATARNIPLVATNHFMPNNVEPYILAPGPVRSVGTRMAWRDLKNQFEQADYLTV PTQLAADLLTENGFTRHVRPVSCGIDLSEFSPSDEPAGDKPPSVLFVGRLSSEKHIEDLL AAVARTSPELNLHATIIGAGEQLQALKQQAQDLGIADRVNIPGKVSQEQLVQAYKDATFF CMPSTAELQSIATLEALASGKPVVLADAVALPHLVRHGENGYLFEPRNVDELATAFTRLA TAEEDDLGRMSEVSQTIARQHDISHTVSTFEDIYRAVIAQKS >gi|294971151|gb|ADNU01000046.1| GENE 7 6514 - 7908 1232 464 aa, chain + ## HITS:1 COG:lin2977 KEGG:ns NR:ns ## COG: lin2977 COG0477 # Protein_GI_number: 16802035 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 19 423 22 426 470 212 34.0 2e-54 MTLEQRRLLGVALVPLLSALLSVSIVNVVLPSVQSTIGASNSGLQWVLAGYTLSFGVVLV PAGRAGDVYGRGRLFIAGLVLFGAGSLVAGLAPNTLILNLARVGMGLGSGLLNPQTVGLI QQFFTGKQRGVAFGLFGATVGVSVAIGPVLGGVLIALLGPEWGWRSSFLVNVPIVVFAII LAFLWFPQGAWRALKSGVPDIDPVGTMIFTLAILLVMLPFLQHESGLVYLLLPVGLMMFA AWALWERHYTKRGRQPMVDLALFRTPSFANGTLLITLQFTGVTSVWVIVAVFLQQGHDFT AFEAGMIGLPAAVLSIFTSRWSGSRVFTYGRKLVVMGIVVVLVGLIGTASVALLNRSFDV SVWWMMIPLTLVGGAQGVVISPNQTLSLNDVPVAYAGSAGGVIQAGQRLGTAVGIASITG VFFGFEQALGWDGTFALSFSIISVIVALAGCVGVYDMVKGRRAR >gi|294971151|gb|ADNU01000046.1| GENE 8 8022 - 9248 1013 408 aa, chain + ## HITS:1 COG:no KEGG:Krad_4323 NR:ns ## KEGG: Krad_4323 # Name: not_defined # Def: diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) # Organism: K.radiotolerans # Pathway: not_defined # 6 401 4 405 743 117 24.0 1e-24 MDSDDLEHVIRHGLIGTKFEPVHDNVTGSPAGYVVTPFRRDIDDCDSDRLRESIQQSDHT GDYDSSIRGIALRDAENAGITQNTRLFFSAEPESLVTLEERPDSQARSMILKLDHTSVRD NPAAVLRSIRSARQMGWGIGIRNVGLDLESLSFIPLINPSIVGLHPDVLRIEDRAYLSKL TWLLQSHIERTSGVIFARGVRDERDVDLAEQMGVRLISGPFFGPGTETPEPLEMAAEDYL ADHYTRNKQVQGTPYSISQSLGRDPLITAQDLLLEEIRSLLERAKHAGPSAVVVVVHSSD ECLDPTIGDLVRSIAPEVGVLASVSGESVATTLPNIMTGPLDSSDPLRNEYGVVVVSSDW SAMITAHRLARPGAERRTDFETYFTTDRFACVDGARAVLSRLASRRNV >gi|294971151|gb|ADNU01000046.1| GENE 9 9457 - 9951 467 164 aa, chain + ## HITS:1 COG:no KEGG:Xcel_2142 NR:ns ## KEGG: Xcel_2142 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 3 164 6 166 166 211 65.0 6e-54 MNTQGVLFVHSAPRALCPHIEWAAGGALGAQAKFDWSDQPAAPGLLRAEICWRGPAGSGA KIASALRGWDNVRYEVTEEPSEGHDGGRWSHTPELGIYHAITDAFGNIVVPEDRIRSVME IASGRPDLFAERMDALLGQDWDNELEPFRHAGEGAPVRWLSKVG >gi|294971151|gb|ADNU01000046.1| GENE 10 9966 - 10754 347 262 aa, chain - ## HITS:1 COG:RSc1591 KEGG:ns NR:ns ## COG: RSc1591 COG3836 # Protein_GI_number: 17546310 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Ralstonia solanacearum # 15 254 16 251 272 207 49.0 2e-53 MLKPSFRQILDNSTRPCVGLWNSSASPVSMEILAMSGTDFIVIDGEHGPIELREILALLQ ACEPYPATAVVRVPWNDEVRIKQVLDLGAQNLVVPMVSSANEAQRAVEATRYPAPHRPGR RGMGAMLARSARWGAVTDYSESADSTVSLTVQVETARGVSNVEEIIATEGVDALFVGPAD LAAHMGHVGDSSHAEVVAAVDHVVRVAVSAGIPVGVNAFSPRDADRVLDAGADFVVTSAD VLLIAQGAQEQVVRIRARDSRS >gi|294971151|gb|ADNU01000046.1| GENE 11 10924 - 11529 389 201 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0573_10610 NR:ns ## KEGG: HMPREF0573_10610 # Name: not_defined # Def: putative multidrug resistance efflux pump # Organism: M.curtisii # Pathway: not_defined # 64 199 96 239 249 82 34.0 2e-14 MSHNEHQLTEVAALYIYALVHDLDAVTDADVDADLHARITDVLTTQKAYDLDATSILQLA TAARVIVAAPGAKTLSAAAYDKARSQIVACMPRSGNAGVRLWPPTSQTVRAHLGGGAWND ALDAVGIPTAKTGRARGSSRFSHDDFRKAMTDFSKASDNRSYKAYEEWVKAERAQGRERP AGATVRNTFGTWSEAMRLAAE >gi|294971151|gb|ADNU01000046.1| GENE 12 11532 - 12692 705 386 aa, chain - ## HITS:1 COG:alr2265 KEGG:ns NR:ns ## COG: alr2265 COG0438 # Protein_GI_number: 17229757 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 1 370 1 369 378 319 44.0 5e-87 MRIAIFTEVFLPKIDGVVTRLLGTLDQLHDMGHEAVVFAPGHPPARYAGFRVEPVRSISF KPWYPELKLGLPTERIATTMERFEPHVVHAVNPVWLAAWGTMAATRRNLPLLASFHTDVP EYATRLGLEWITDTSTRWVRYMHNRAEVNLCTSGPMVKRAQEAGIRNVGLWPRAVDTQTY SPENYSQSMRERLTGGNPDDPLVLYVGRLSKEKDLDVCRGMLEHLPANTRLAMVGSGPHK AQLEAMFAGSNTVFTGYMSGQDLAAAYASADAFVFPSTTETLGLVALESLASGVPVVGAR AGGIPYAVADERTGFLFEPGNSAEAAHKISLLLDNRSLREKMARAGREQAQEWGWRTATE ALVGFYESAIDLHRYAPKSLVGRLRS >gi|294971151|gb|ADNU01000046.1| GENE 13 12705 - 13913 1180 402 aa, chain - ## HITS:1 COG:SMc03961 KEGG:ns NR:ns ## COG: SMc03961 COG0451 # Protein_GI_number: 15966498 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Sinorhizobium meliloti # 1 389 1 388 406 519 64.0 1e-147 MKIIVFGGDGFCGWPTVLHLSQRGHDVMIVDNLSRRRIDDELGAQSLTPIASIDERIDAW EEISGNKLQFRNFNMATQPDQLLETLVEFAPDTVIHFAQQRSAPYSMKRPENKRYTVDNN VNATNNLLTAIVESGLDIHLVHLGTMGVYGYGTAGMKIPEGYLDVEVPNEETGENVHQQI LYPTNPGSIYHMTKVLDQHLFAYYAKNDALRITDLHQGIVWGTNTEETRSDERLINRFDY DGDYGTVLNRFLMQAAVGYPLTVHGTGGQTRAFIHIQDTVRCIEIAVNNPPASGDRVKIF NQMTETHRVRDLAKLICSITDARMELVNNPRHESAENDLHVKNDTFLDLGLEPTTLSEGL LLEVEETAKRYADRADMSKIPARSLWTKNQSAGVPTDAPVVG >gi|294971151|gb|ADNU01000046.1| GENE 14 14086 - 15405 1185 439 aa, chain + ## HITS:1 COG:MT2199 KEGG:ns NR:ns ## COG: MT2199 COG0624 # Protein_GI_number: 15841632 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 12 436 12 445 448 391 48.0 1e-108 MSALDKVCDEAASEVVQLCQDLIRFDTQNWGEGKANPERIAADYIAEKLAEVGVESQIFE SAPGRANLFARIPGKNPDRPALVVHGHTDVVPADASEWSVDPFEAVIKDGCVWGRGAVDM KDMDAMIVAGVRALVRNNVQPDRDLIIAFFADEEAGSTYGSHWVVKNHPEVFEGASEAIS EVGGYSVDIRGQRAYLVQTAEKGMEWVRLTAHGNAGHGSQINNDNPVVKLAAAVARIGEH EWPTEPPAATRELLAGVSELTGIENTEANRDKLLAELGSALKFVGATFQTTANPTALDAG YKHNVIPGQASALIDCRPLPGRNEDALLTLKELAGPDVVVEQVISGVSLETPFEGDLVDR MKEAIEAEDPGATVLPYTLSGGTDNKALSELGITGYGFAPLKLTGDLDFPAMFHGVDERV PLEALDFGARTLVRFMVSA >gi|294971151|gb|ADNU01000046.1| GENE 15 15389 - 16330 844 313 aa, chain - ## HITS:1 COG:STM3549 KEGG:ns NR:ns ## COG: STM3549 COG3238 # Protein_GI_number: 16766835 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 7 305 10 306 323 96 28.0 6e-20 MRGNSWLAVSGAFMVGATIAVQGLVNGALASKVGIGVLAATASFSIGLVLISIITASSRT ARRGVVTVLSYLFSGLIPFWLFLGGVAGGTVVISQAVSVPVIGVTIFTTSITAGQLVGGL LVDATRVPPGGKKKITVQRVAGVLIVMAGVTASATGSASLGFAWWWPLFPFGVGTLVALQ QAVNGRIRVISGSTLAATFINFAVGTSYLGLFSIALVSIGYSWTALPQTHEMWMLTGGIL GVFVIGMSAFVVQGLGVLTMTIITLLGNMTASVVIDIATGHAQTALSPLTLLSLGLVTTG SLVVSTARTKPKP >gi|294971151|gb|ADNU01000046.1| GENE 16 16356 - 16991 447 211 aa, chain + ## HITS:1 COG:Cgl1034 KEGG:ns NR:ns ## COG: Cgl1034 COG0406 # Protein_GI_number: 19552284 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 4 196 21 207 233 112 35.0 6e-25 MVTIILLRHGESTANVQRVLAGRLAGVELTDRGREQVAKVAQELPSIDAIRHSTIDRCVD TARIVASNRIIAQSSDVTIEADSRFDEVDYGEWSGLALDDLRTRAHWERVQQSPHTFEFP GGEAMTHVFNRAVDGLTSLINDLGPGQTGLIVSHGDVIKAMVAHAVGAGLSNFQRFGVQP AQFCVLHVQGQTMTLSLGGSRISGTTLGGEC >gi|294971151|gb|ADNU01000046.1| GENE 17 17004 - 17828 1098 274 aa, chain - ## HITS:1 COG:AGc1833 KEGG:ns NR:ns ## COG: AGc1833 COG1968 # Protein_GI_number: 15888341 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 274 3 276 278 299 60.0 5e-81 MDWLVAIIMGIVQGLTEFLPISSSAHLRIVGEFLMPGREPGAFFTAIIQIGTETAVLVYF WKDIVRIISKWFKALVGKHDRRDPDVRLGWLVIIGSIPIGVLGLLFQDMIETTFRSLWIV GSMLIIFGLLLGLADRVGRKEYTLDKMSWGQGLLYGGAQALALIPGVSRSGGTIMAGRFM GFTREAAARYSFLLAIPAVMASGLYSLAKAANEPLTLGWGPTAVATIVSFGVGYAVIVGF LKFIQTKSFAVFVWYRVALGILIFVLLGTGVLSA >gi|294971151|gb|ADNU01000046.1| GENE 18 17895 - 18791 668 298 aa, chain + ## HITS:1 COG:Cgl1480 KEGG:ns NR:ns ## COG: Cgl1480 COG0667 # Protein_GI_number: 19552730 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 6 297 2 311 312 127 35.0 2e-29 MLHNRVGQSGFTVSDLTLGTFEWGSRVNRETAFELMSAYVDAGGTLLELSACTSSAHALV GSMKVPSTLRVAARVGIESIGGELQISNSRAVITEQVARLRQTLGRDCVDLVIVDAFDPH TPLTETALTLRDLQARGEIGYVAVAHHTAWQVALMRAEVDVVCAFTELSLVNRSAEDDIV PACDYMGMGVIAGAALGRGVLTGRYATGTPADSRAAHDLRQYVGAYLGPDYEPILKGVSK AAEALGVRPVDIALAWNRGLGVSSSIVAPRTVRQLTELLESDLVLEPEIRDALSQISS >gi|294971151|gb|ADNU01000046.1| GENE 19 18817 - 19143 520 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395897|ref|ZP_06806082.1| ## NR: gi|295395897|ref|ZP_06806082.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 65 1 65 108 95 100.0 1e-18 MSLEPEVALEEFLSAVRAHFSAAAHRTSDTDARVEATYMALADAFEVYEDALYNAFDEVT PLELFDDIEDAIADDDNAYDMDDFDDDLDDDDDDYDEDDEDDDEDDRR >gi|294971151|gb|ADNU01000046.1| GENE 20 19181 - 19744 523 187 aa, chain + ## HITS:1 COG:no KEGG:SGR_5838 NR:ns ## KEGG: SGR_5838 # Name: not_defined # Def: hypothetical protein # Organism: S.griseus # Pathway: not_defined # 1 187 1 194 196 178 53.0 1e-43 MSGHVFEHDSPDRFIPGTVGMPGGRTFYLQAVSDTTITSVLLEKEQVEMLGERINELLDT VRSKSVGESNIPVSALPDYVDNSGLTMPVDAEFRVGTMSLGWDTRIHRLVVECFELSEAD REAGISAEPHEDTERDVLRVTLDAVQAREFARHAELVVNAGRADCPFCSLPLDPEGHVCP RANGVAR >gi|294971151|gb|ADNU01000046.1| GENE 21 19745 - 20521 449 258 aa, chain + ## HITS:1 COG:no KEGG:Namu_2778 NR:ns ## KEGG: Namu_2778 # Name: not_defined # Def: hypothetical protein # Organism: N.multipartita # Pathway: not_defined # 13 258 26 272 272 160 43.0 6e-38 MSHQHDIATCPATVLGLIPEASNDTYLIVLTPPTGAALKAVYKPSQGEAFLQDFSELARR EVAAYRLSYLSGLNCVPETIMRSDLPHGPGSVQLFVDSAGDDPVVDAWLSEYVPEDIVPV FRDYNSDGAEVVVGHGLSERLADIAMFDVVANNADRKGSHLINGQLPGEKSGSIWAIDNG LSFHPELKLRTVLWGFAGTPLAPRHFHACERTLALTADDLGTTQEETHALHARTRALLSS GQFPYPPVNRTPIPWPPL >gi|294971151|gb|ADNU01000046.1| GENE 22 20639 - 21814 788 391 aa, chain + ## HITS:1 COG:Cgl1478 KEGG:ns NR:ns ## COG: Cgl1478 COG0215 # Protein_GI_number: 19552728 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 21 390 45 420 420 379 54.0 1e-105 MYCTRARGPLRKLVRGDEAKLYVCGITPYDATHLGHASTYVAFDVLHRLWIDAGYSVTYV QNITDVDDPLLERAQATGVDWQELAREQIDLFRSDMEALRVIPPTHYIGAVEAMDIVARS VVELLDKGFAYSLDNGDVYFKIDSSYKPPFGSVSHYDADTMAKLFAERGGDPDVAGKENP LDPLLWRAKREGEPSWDPDGLPAGRPGWHIECTAIAQEYAGLPLHVQGGGNDLAFPHHEM GAAHAAAWLDTPLAQSYMHTGMVGYEGEKMSKSLGNLVLVSQLREQGVDPMAIRLTILDH HYRSDWMYDDGALAKATERLEQWRRAAQCGSHYVSKDVVRELRECLADDLDTPTALSLID DWAAARDQNTSESESEAVVKAVDALLGIQLA >gi|294971151|gb|ADNU01000046.1| GENE 23 21811 - 22476 562 221 aa, chain + ## HITS:1 COG:Cgl1470 KEGG:ns NR:ns ## COG: Cgl1470 COG0637 # Protein_GI_number: 19552720 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Corynebacterium glutamicum # 7 208 4 208 231 107 34.0 1e-23 MSLNYDAVLWDMDGTLVDTEPYWMAAETELMAAHGLEWTHEQAMLMVGNTLTKSADIMRS FGLPLATDEVVQTLLRGVIARVHERIPFRAGAQELIASLQAADVPMALVTMSYRSLAQAV VDGLPEGTFRTLITGDEVSRGKPDPEPYLTGAASLSVDPAACIALENSVPGMASAIAAGT LTVGIPNHVPLEEQPGAILIETLDGLNAESLGNLVRPLQGS >gi|294971151|gb|ADNU01000046.1| GENE 24 22427 - 23263 338 278 aa, chain - ## HITS:1 COG:Cgl1464 KEGG:ns NR:ns ## COG: Cgl1464 COG2887 # Protein_GI_number: 19552714 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Corynebacterium glutamicum # 5 261 15 270 278 227 45.0 2e-59 MAELIALSPSRANDFVSCPLKFRFRSVDKIPEPPSAAAFKGTLVHAVLEQLFDVPSRERT LDHATTLIKPTYASLAQENSDVPDLFPEQTDRDRLFSESQALVRAYFALELPQNLEPDAR EKFVQTVLPGGLKLRGFIDRVDRAPGGEVRLVDYKTGKAPKPQYSGDADFQMRFYALVHY LLTGETVHTLQLMYLGSGNVKELQPTMQDIQRTFFQVADVWNDITGCAESGNWRPKKSPL CNWCYFKNLCPAWGNEAPEAPEITNLAEVEPDFPEIQR >gi|294971151|gb|ADNU01000046.1| GENE 25 23342 - 24496 1133 384 aa, chain + ## HITS:1 COG:alr3900_1 KEGG:ns NR:ns ## COG: alr3900_1 COG1994 # Protein_GI_number: 17231392 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Nostoc sp. PCC 7120 # 15 257 8 236 237 95 30.0 1e-19 MPHAKQQGASNGLIIGRFLGTPIILAWSWFVAAAVITMLFTPWVRHFSPDLGIGAWFVAF TYALLLFSSVFLHELAHAIAGTLTGQKVAAIELNIWGGFTRFEPRTDDNSARAATHSFII SIVGPFVNIGLGALGWWGMSSTQQGSVTWLLLLAFTFANAALGFINLLPGIPLDGGWALQ ALIWRVTRSQFTGTIMAALIGRIIAVLFIVGAIVGPLIAGRKPDIITLIWTSAIASMLWF SAADAAKHAQRARRMETYDLKKVIQPAIAASWNASIDATLEYADSVAGPSTIVVILNERG LPYGLLDRHAATQAIVNTNAADDLVHSYANPLGGWIGVPEDISAPHLLESLTHRPKAQFC LVMHDSTLTGVIDLQEFFDELLHV >gi|294971151|gb|ADNU01000046.1| GENE 26 24643 - 25557 708 304 aa, chain + ## HITS:1 COG:Cgl1462 KEGG:ns NR:ns ## COG: Cgl1462 COG2519 # Protein_GI_number: 19552712 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Corynebacterium glutamicum # 1 253 26 273 278 270 54.0 3e-72 MLQPGHVFHTHKGQLFHDDLIGQPEGTVIANTAGVDYQVVRPLYEDFVLSMPRGAAVIYP KDAALIVTLGDIFPGATVVEAGVGSGALTLALLRAVGDSGVVHSFERREEFAQIAQGNIE DFFARPHPAWKLSIGDLAHELPNAYQAGEVDRVVLDMLAPWECIEAVSHALCPGGVVVCY VATVPQMSRTVDALKASGLYTEPRALESTVRDWHVEGLAVRPEHRMIGHTGFLVFARRLA PGATPLEKKKRPQGQQPSQEDIDAWQSGEVTDEALGIPNTTGKKLRRAAREAGKRAQIIG QEES >gi|294971151|gb|ADNU01000046.1| GENE 27 25554 - 27104 1599 516 aa, chain + ## HITS:1 COG:ML1316 KEGG:ns NR:ns ## COG: ML1316 COG0464 # Protein_GI_number: 15827684 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Mycobacterium leprae # 4 513 24 584 609 560 55.0 1e-159 MTEAELPKVRQELAGLRQQLFNASKRNEALTKTLRQARDELERIRAEANALTEPPNSYAT VVQAVPGENLRCDVHYAGRKMRVAVAPEVEASDLQAGRTVLLSEGLVVLKALDFHAAGTV VAVREVLGDRVLVGGVNDEEQIYSLAAPLQEITIRPGDHLLVDSKTQFALEYVEKPESNQ LLLETVPDISYSDIGGLDHQIEEIQDAVELPFEHPELYTEHGLKPPKGILLYGPPGCGKT LIAKAVANSLAKRRKDTSTRSYFLNIKGPELLDKYVGETERQLRQIFARAREKATAGSPV VVFFDEMESLFRTRGTGKSSDVETTVVPQLLAEIDGVEKLENVIVVGASNREDLIDPAIL RPGRLDVKIRIERPDENGARDIFSKYLTPELPIHTVETTVEEAVKDLIDRCVETMYARTD ENRFVEVTYVSGKKETLFFGDFISGAMISNVVDRAKKHAIKSLLSTGERGITWEHLHTAI REEFREHEDLPNTSNPDEWARVSGKKGERITHMSMF >gi|294971151|gb|ADNU01000046.1| GENE 28 27138 - 27521 424 127 aa, chain - ## HITS:1 COG:no KEGG:Mmcs_0167 NR:ns ## KEGG: Mmcs_0167 # Name: not_defined # Def: putative transmembrane protein # Organism: Mycobacterium_MCS # Pathway: not_defined # 20 124 18 122 127 80 44.0 3e-14 MSVSRKSTSHLLITLVTDAVLVCLFAVVGYYTHAQNLEFSGIVRTAWPFMAALAIAWLAN AVWTAPLAPLRTGVGIWATTVLVGMIIRIILGEGTAGPFILVASGVNLFTLVGWRVLASQ LAGKGAR >gi|294971151|gb|ADNU01000046.1| GENE 29 27529 - 29079 1444 516 aa, chain + ## HITS:1 COG:no KEGG:Krad_1871 NR:ns ## KEGG: Krad_1871 # Name: not_defined # Def: hypothetical protein # Organism: K.radiotolerans # Pathway: not_defined # 9 506 1 539 541 482 50.0 1e-134 MRAREVHVISVRRVMGAETEFGVWQPGNPKANPMRDSARVVDAYAQPRGLKSSQNFWDFS AESPLADARGFLMSVDDAHISQLTHLPESQPEAQYLANVVTENGARLYVDHAHPEYSSPE SLYPRDVVLYDRAGDLVALEAVRNLANTDQPVNLYKNNTDSKGASYGTHENYLVDRAVEF DHIVEGLTPFFVTRQILCGSGRVGIGQEASVPGFQISSRADFFEECVGLETTLRRPIINT RDEPHAEPSLYRRLHVIIGDATLAEPATLVRFGSTSLVLALIEQGLAPRILLKDPVEALY TVSHDLGLSASLPLEGGGETTALEIQRAYLEAVETHMDPDCEATAEVVAEWERFLEGLAS DPLSLADSIDWVAKYQLLQGYVRNQNLPWNHPKLQLIDVQYHDVRPEKGLFYKLEASGRI RRLTTPEAVEHAVENPQADTRAWLRGTLVSRFGEFVESASWDTIVLNLGNEYVRIPMRYP EFGTRELAEEALADVTDAQSLFKALSLIKLSDNERE >gi|294971151|gb|ADNU01000046.1| GENE 30 29081 - 29269 253 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395908|ref|ZP_06806093.1| ## NR: gi|295395908|ref|ZP_06806093.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 62 1 62 62 82 100.0 9e-15 MSQFQQHAGGGKGNNDESDEFVEAGQAQINTQGVDDILDDIDSMLETNAEDFVKNFVQKG GQ >gi|294971151|gb|ADNU01000046.1| GENE 31 29266 - 30063 797 265 aa, chain + ## HITS:1 COG:MT2170 KEGG:ns NR:ns ## COG: MT2170 COG0638 # Protein_GI_number: 15841602 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: 20S proteasome, alpha and beta subunits # Organism: Mycobacterium tuberculosis CDC1551 # 15 265 23 281 291 203 47.0 3e-52 MNSGFDKHFLDATTNSFVEFASRVRPHVLPQVPSRVMSQQLDAPVGTTIVAFKTERGVLM AGDRRATMGNLIASHTIQKVHAADSASVIGIAGTAGLALELIRLFQLELEHYEKIEGTPL SLEGKANRLASMLRGNLGLALQGLAVVPLFAGTVPGTTSGALYSFDVTGGKYQELDFHSI GSGAGFARGALKKLWKPQLDDDEAVRVAVQTLYDAADDDSATGGPDLVRNIAPQVMTVDG DGVKEVPADQVLEIARSIVTGRNNS >gi|294971151|gb|ADNU01000046.1| GENE 32 30060 - 30791 639 243 aa, chain + ## HITS:1 COG:MT2169 KEGG:ns NR:ns ## COG: MT2169 COG0638 # Protein_GI_number: 15841601 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: 20S proteasome, alpha and beta subunits # Organism: Mycobacterium tuberculosis CDC1551 # 1 234 1 243 248 190 45.0 2e-48 MTAPFYVSPEQLMKDRAEFARKGIARGRSVIVCRYDSGIALVAHNPSSTLHKVAEIYDRI AFAAVGKYNEFETLRQAGVRYADLRGFSYDRADVTARGLTNAYAQTLASVFTTESKPFEV ELVVAELGETPAQDRLYRLSYDGSVADENDCVVIGGNAEVTAQRMHLTPGLKDLDSTINT AVRALFGDEDPVAAHVEAAVLDRNTQARRTFVRLTEDQVRQALERAGQDSKQTDETPEEE TGE >gi|294971151|gb|ADNU01000046.1| GENE 33 30788 - 32248 1059 486 aa, chain + ## HITS:1 COG:no KEGG:Mmcs_2467 NR:ns ## KEGG: Mmcs_2467 # Name: not_defined # Def: protein of unknown function DUF245-like protein # Organism: Mycobacterium_MCS # Pathway: not_defined # 2 480 3 452 452 503 54.0 1e-141 MKRIFGLETEFGIAYAPSGGRRLGPEEVARYLFKPVVAWGRSSNVFLPNGSRLYLDVGSH PEYATAECDRLDDLIAQDSAGTVIMQDLLNRANQALNDDGYDGTPHLFKNNSDSAGNSYG SHENFLIRRNMDFAHLTSTLLPFLVVRQLMVGAGAIIPRQVTTAMPAVQTNRANPHAAQT VATPTSDVVFGLSGRSDVMWEGVSSATTRSRPIINARDEPHADAEKYRRLHVIVGDSSMA QPTTQLKVGSAALILDMIETGVPLRDLTLSDPIRDIRVIARDLTGTTPLELKAGGTLTPL ELLEIYLEAATKIVDRGDHSVGDDQTARDVLDLWGRMCEAVRSQDFSAVDTEIDWVIKKK ILDRYMDRSDVELSDPRIRRLELAYHDVTPGVGLVEKMQAGGLIAQTVSDTDIATAKDVP PQTTRAKIRGAFVQAAVDHRADFTVDWVHLRLNAHAQRAVTLRDPFVSTSEHADELIACL NGSELA >gi|294971151|gb|ADNU01000046.1| GENE 34 32272 - 33207 942 311 aa, chain + ## HITS:1 COG:RSc0784 KEGG:ns NR:ns ## COG: RSc0784 COG0545 # Protein_GI_number: 17545503 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Ralstonia solanacearum # 212 307 18 115 117 95 52.0 2e-19 MKKLVCAVAVSALVLTGCGGKEDEPTSTDQQEQKQNGSIDDIKVSGETNKKPEVEVKTPF AAENAHKTLEQGSGKKADKGLQVTAHYTVVSGESGKVVESSYDSKPSGFPVDDQQISKRL FDAIVGVQEGGRVLMVENASPGGNQPNQTLIYVWDIVKVDKTPEILSKAEGTEKEIPGDL PQVTRDKDGKPSISQPKGDAPKELTVKPAIEGDGPVVKEGQKVSVHYTGWLWDDTSKPFD SSWDRGQPFSFTPGAGEVIAGWEEGVTGQKVGSQILLVVPADKGYGDAGSPPNIPGGATL VFVVDILAAVG >gi|294971151|gb|ADNU01000046.1| GENE 35 33207 - 34178 776 323 aa, chain + ## HITS:1 COG:ML1329 KEGG:ns NR:ns ## COG: ML1329 COG2378 # Protein_GI_number: 15827690 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium leprae # 9 299 5 311 331 107 32.0 3e-23 MVAAPVRKQYERLLNLLFALRNTRIWMSKAQIREHVEGYENLSDDAFNRMFERDKATLRG MGINISSTGWNNRPNEDVVYGYRITDADYALDEISFTPAQVEVLRAASVWLPQTGPAARA ITKLTGLGEDLTQRDVPVPAAATNTQLTGRFIDAVEERRPQTFTYRKAGGQPEVRTFFPY GVLSRGPRVYVVGYDVNRQGIRVFRLSRIVGKVKHHPKYRAGAYDIPQDFSARDYVRSDP TVSATVAVARGRGEDLRARAQNVTHIDDDWDRLTVDVTDTHAFISEMLGLGSFVKPLEPS EVVQAYQDGYRQTVECLKELAGE >gi|294971151|gb|ADNU01000046.1| GENE 36 34171 - 35046 760 291 aa, chain + ## HITS:1 COG:MT2156 KEGG:ns NR:ns ## COG: MT2156 COG2378 # Protein_GI_number: 15841586 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 1 284 1 297 316 73 27.0 4e-13 MSSTPQVVTTLISLVAYITKKEEVPIAELAAVFGLKESTVRDYLDVLLVSGMPGDYGAKI DVWENDGIVSLSNTEGVDVPVRLSSLEAHLLLMALESAGSETPEVAQSVIEKLRNAVGEW ESDAVSFEPAEVSPELRSAVTHALKTGTALTIDYYVRSRDEITTRTISPIEFNLDGQWYL DAYCHDKQAHRSFRVDYIRNWETTSEPAQKGSDENNYGETCRISFAREGAWLVDELTPRA VSFDTHGPGTVTLELTVFSADWIVQLLMMHGRHVLAIEPGEYARAALERLE >gi|294971151|gb|ADNU01000046.1| GENE 37 35075 - 35329 311 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395915|ref|ZP_06806100.1| ## NR: gi|295395915|ref|ZP_06806100.1| sec-independent protein translocase TatA/E-like protein [Brevibacterium mcbrellneri ATCC 49030] sec-independent protein translocase TatA/E-like protein [Brevibacterium mcbrellneri ATCC 49030] # 1 84 1 84 84 107 100.0 4e-22 MRPEPSHIIILLVIIILLFGASKLPSLARNLGKSAKIFRDEVKSMNDDSNETPAELESSR SEDATDKATRSHVDSTQSVRDTDK >gi|294971151|gb|ADNU01000046.1| GENE 38 35356 - 36111 868 251 aa, chain + ## HITS:1 COG:Cgl1454 KEGG:ns NR:ns ## COG: Cgl1454 COG0805 # Protein_GI_number: 19552704 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Corynebacterium glutamicum # 1 251 1 261 314 136 31.0 4e-32 MPLMGHFKELRNRMIVALIALLIGAVVGWFLYDPVIVLLKRPLDDVAESQGRTAELNFAG IASPFDLKLKVSVFIGFIVTAPVWLYELCAFVVPGLTKKERQYVFGFLAAALPLFFAGAA LAFFALPKAIQALGSLIPQGASYIVPAQDYLSFTMLLIVVFGIAFVLPVILVGLNFMGVL RAQTIRRSWRWVVMLAATFAAIATPSPDAISMFYLMVPMLFMFFLAWIVCAVNDKRRKRK MIAQGTWVEED >gi|294971151|gb|ADNU01000046.1| GENE 39 36136 - 38820 2032 894 aa, chain + ## HITS:1 COG:MT2153 KEGG:ns NR:ns ## COG: MT2153 COG4581 # Protein_GI_number: 15841583 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Mycobacterium tuberculosis CDC1551 # 19 891 2 901 906 676 45.0 0 MDHPTPAEAYAQFQAKKGTMTGPLAEFRNELSFELDDFQLRACSALNDGRSVLVAAPTGA GKTIVAQFAVKLAVSRGVRVFYTAPIKALSNQKFNELCDAYGEESVGLLTGDVSIRRDAQ IMVMTTEVLRNMIYSGTDLSDLGFVVLDEVHYLGDRFRGPVWEEVIIHLPIHVLLVSLSA TVSNAEEFGAWLAEVRGSTDVIVSEHRPVPLHNHACVGTDIFPLFAPRGYNVNKELERYV RRFQPSPGNRRRGRYFTRFRRPARSSVIEALGSANLLPAIFFIFSRNGCDDALEQCLAGG VDLTSTREKQEIARRLDDLSEELPAEDLGVLGFHNFSAGLMQGIGVHHAGLIPQFKEIVE ELFVRGLLRVVFATETLALGINMPARTVVLEKLTKFNGESHVQITPGEYTQLTGRAGRRG IDVEGHAVTVWNPQIELADIAALASKRTYALKSQFTPTYNMAANLLARMTSEDAKKVLET SFAQYQADAAVVGLARRVRSKEETLAGYESAMECSYGDFSEYAGLRRTIAQLEKRASNQR SKLRQRDVIESLSHLGVGDTIFIPSRRGFGACVVLQALRNDDHGVRLPTVLTESGKVWHL RPHEVTEPAVKLGRIKLPKKFNHRVVAHRRQVQAIVESALDEGRLKDPAAVPRSKHKAPT VGQDEIQLVRQQLRDHPCHECPDRETHARWAERVAKVEKELSSLTHQIEGRTSSIAHVFD RVCNVLVTLKFLPDDSWILRRIYGERDLLTAMSVRAGIWDRLTEPEVAALASSLVYQARR EEAGVPRLPSKHLQKAFGELQQLWNQLFHIETDSRLPITPEPDPGMMKAIFAWTEGKTLS SAMGSAEFSAGDFVRWAKQTLDLLGQVENVVEPSTAKVIKRAAMSIRRGVVLDS >gi|294971151|gb|ADNU01000046.1| GENE 40 38850 - 41102 2015 750 aa, chain - ## HITS:1 COG:MT1869 KEGG:ns NR:ns ## COG: MT1869 COG0653 # Protein_GI_number: 15841291 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 59 740 101 796 808 600 49.0 1e-171 MGLFDKLVNKPGSQAKKRVGWFDKVLKDLPESDYEDLERSEFPSTATKIFETGDKREQLT KFAALVRVAAEKTLEQRPYDVQLRGLVALLDGMVVQMVTGEGKTLVGAMAAAGYALQGRY VHVVSVNDYLAARDAEWMRPLFELLGVSVASIQESDDDATRREAYSAEVVYGSVQEIGFD LLRDRFVEDDADTRVPPRDVVIVDEADSVLIDEARVPLVLAGSTNVEEANFEIARFVEKL EDGVHFEVSDDHKAVSLTDEGIDLAEKTLDVDLFGDDADTLAAINLALYAQALVHRDVDY LIVDGAVKLISDSRGRVAQLQRWPDGLQAAVEAKEKLETSESGEILDQMTVEEMIHGYPT VCGMTGTALAVGDDLREFYNLEIAAIEPNVPTIREDEPDRLYTFQESKERAIVDEVLDQH KRGRPILIGTRSVAESESLASRLQARGIDSEVLNAKDDSREAEIISRAGAKGAVTVSTQM AGRGTDIRLADEEVADLGGLLVIGAGRYPSSRLDDQLRGRAGRQGDPGTSVFFTSLEDSL LDRVPDAQRFVEDGDETGFIDSKRAAQMVEHAQRIAEGENTAIHRDTWRFNELMAKQRQL VLKRRDKVREGDGVAEVQERLDEEFVKRHSDLDDAIVEQAITSVLLFKIDERWVDHLAYL NDLREGIHLRTLAREKPHEAFNSESVRVFSSFWDDVVDGAAQVLNDATITEQGLDLETYG LKRPSSTWTYLAAESTFGSDVENIVKRVRK >gi|294971151|gb|ADNU01000046.1| GENE 41 41102 - 42712 1122 536 aa, chain - ## HITS:1 COG:MT2151 KEGG:ns NR:ns ## COG: MT2151 COG0258 # Protein_GI_number: 15841581 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Mycobacterium tuberculosis CDC1551 # 4 297 5 309 318 174 38.0 3e-43 MTGLVIIDTPALYYRAFYSVPSSLTSSDGTPVNALRGTLDAIATLATRLNTTRFIAASDA AWRPTFRTQIVPAYKAHREREDKPGTETPDELIPQIPLIYQACTLLGMPVGHIEDTEADD VIGSVVRQWDGPITVVSPDRDLLSLLSPDKQVTLLRPRPRGQWEETTIHDLPELYGVPNG QRYRELAALRGDPSDGLEGATGIGEKTAAKLLAGYGTLDNVFEAAKRGVKDHGLSPKRRE NLLEAEDAVRKNVEVMTVLTDLDVGNLIEASATITPNIAGLEDFAQCYGVERSIGRLTDT FTSHAPQKAPPTSWADEPMYAFDLETTGRDPHTAHIVSAALIDMRTHETWEWLIYPEGEI PAEASAVHGITTEYARENGMPRAQAIAQIHQVFAERTPACIVAHNAPYDLTIFARECAQY GLALPDFFVIDTLVIDKHAEPFRKGPRTLDAVCARWGVSLDNAHDATADARASGLVALAI ADAFPELAQLSAEQIHGAQKEWKRDQAARLQEYLRTRRNPNAVVEHEWPFLTRGEH >gi|294971151|gb|ADNU01000046.1| GENE 42 42753 - 43679 421 308 aa, chain + ## HITS:1 COG:no KEGG:SAV_6922 NR:ns ## KEGG: SAV_6922 # Name: not_defined # Def: hypothetical protein # Organism: S.avermitilis # Pathway: not_defined # 172 300 398 533 540 92 45.0 3e-17 MWRVSETLFGGDVYSSADPFATAITYDDDTVVWVGSDEAVSSGTPLDGDFVAPGFVDAAV DLRNTDGYDYLACGVTSVHVIGTSEQCEAVSDPHVVAYPTDAREGRRAVRVEDVREANDV TDPVFVCVDSAADLAELEGLVRDSEWKTAAQRAGLRVMVGCDTDVDPEVWGGSGLAVTVN PHHTRDLHALFNAGAQVSFSLAGNPWGAVRAGVENGLSARAAFNASTRFGFRALGQFEGG VLAPGTTVDMVRWSATSLVVQVADPRVAAWSTDPRSGTPGLPDLNEAFPHVRTIWVGGRS HDVPSESV >gi|294971151|gb|ADNU01000046.1| GENE 43 43690 - 44442 411 250 aa, chain + ## HITS:1 COG:Cgl1444 KEGG:ns NR:ns ## COG: Cgl1444 COG0463 # Protein_GI_number: 19552694 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 3 240 10 248 270 276 55.0 2e-74 MKTLVVIPTYNERESLPITIQAIRTYNDVDILVVDDGSPDGTGEWVRQSADYESTLFLLQ RTEKNGLGPAYIAGFTWALERDYEVICEMDADGSHRGRDLPQLLKQVALGADLAIGSRWV PGGAVVNWPRNRHVLSRGANVYVNIALGLGVHDATAGFRAFKREVLETIDLTQVESAGYC FQIDMTMRVALAGFSIVEVPITFVERELGESKMDGGIIKEAFTRVAVWGASRRTSQVKAL VSRVSTRSPE >gi|294971151|gb|ADNU01000046.1| GENE 44 44426 - 44767 335 113 aa, chain - ## HITS:1 COG:no KEGG:Bfae_15950 NR:ns ## KEGG: Bfae_15950 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 1 107 1 107 116 107 51.0 1e-22 MSERSLRGTQLGSRSLESEVGVEPAPRQHVEYVCEDGYTFTVPFSIDAEVPATWDSGAHG IGVRSGEQEPDEEPEKAARTHWDMLLERRSFEELQVLLDERLAIRRGEATPEI >gi|294971151|gb|ADNU01000046.1| GENE 45 44877 - 45152 187 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395923|ref|ZP_06806108.1| ## NR: gi|295395923|ref|ZP_06806108.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 91 1 91 91 120 100.0 2e-26 MTNATQSDVQDATSRTIRERVATTAHTTRVRIRSTRPADVVDASEERLNKGVENVREALH NGVDFLSQLTATGVSKSADLTRRGVALFSRK >gi|294971151|gb|ADNU01000046.1| GENE 46 45278 - 46081 473 267 aa, chain + ## HITS:1 COG:no KEGG:Xcel_2728 NR:ns ## KEGG: Xcel_2728 # Name: not_defined # Def: transglycosylase domain-containing protein # Organism: X.cellulosilytica # Pathway: not_defined # 198 264 341 406 416 76 55.0 1e-12 MGKHASQKTRGSVLDLFSRTKETGRHSQPKKSKKLSAATVLESGRRAPVMAAIAVPTVAI VAVAVAGVVGAPQGGDTSAEASTKPETLAVEQPQSGSNEHEKDFKTAEDQSKDVASHGEV SLAMPQPEEEEPVASSSSSSQSSGSSQKSSSKKGSSRKGSSSSSGSSDADAGDASGDYSS PMSTAEIKAMLGGPGSRWYKIVKCESTFNPRAINKSNRAHFGLFQFKLATWRSVGGKGNP IDAHPREQFKRAKMLQAKAGWGQWSCA >gi|294971151|gb|ADNU01000046.1| GENE 47 46116 - 46955 613 279 aa, chain + ## HITS:1 COG:alr2935 KEGG:ns NR:ns ## COG: alr2935 COG0797 # Protein_GI_number: 17230427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Nostoc sp. PCC 7120 # 163 279 252 369 371 103 54.0 3e-22 MGKHSASKSATQGSLKDLFARRKSSGGRHGEPASAAGVLASGRRTPVMAAIAIPTAAIAT IAVAGVVNNGQGEPSPDAEAQASGRDYYEPDFALPQSDSEQVAEVKKHEEEAKKQSKVAV PVAKAKAPEQESESKSSQSSDSKSQSSDSKSQSSDSKGGSKASPKGASADDSNKPHNTKA SGQGGTCKASMYGNGDGTHGGPTASGERFNANAMTAAHKSLPMNSRVKVTNKANGKSVVV RINDRGPYVGGRCLDLSVAAMKSVGGYSSGVISVSYEVL >gi|294971151|gb|ADNU01000046.1| GENE 48 47148 - 47597 637 149 aa, chain + ## HITS:1 COG:ML1795 KEGG:ns NR:ns ## COG: ML1795 COG0071 # Protein_GI_number: 15827955 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Mycobacterium leprae # 1 132 1 133 148 111 45.0 5e-25 MATRFDPIRDIDRFISEVTRSNSTALPMDLFRDGENYVARIDMPGVRPESIDVDVEDRTL TVRAERDAEVSDGIEWLTRERPTGTAARQLTLGNRIAVDRIVADFKDGVLTLTIPVSEEA KPRKISISHSGNTTSADTAVNPGSSNVDA >gi|294971151|gb|ADNU01000046.1| GENE 49 47670 - 48263 331 197 aa, chain - ## HITS:1 COG:Cgl1397 KEGG:ns NR:ns ## COG: Cgl1397 COG0500 # Protein_GI_number: 19552647 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 1 192 61 257 271 124 36.0 8e-29 MIDVGAGSGKLSSALSDRGLNVVAIDPDSSALELNPCRSLVGTGENIPVADASVDMVTFA QSWHWVDAELTVKECARVLVPGGVVAILINQLNVSHDWVMRIARIIHAGDVYREEWRPKL SDAFGDVEAHVRTFKQEVTFDDVVGLASTRSYWLRSGQHQRDRIVSNLRDYLFRENPMGE KLQLPYVCLTYVARLNE >gi|294971151|gb|ADNU01000046.1| GENE 50 48398 - 49375 576 325 aa, chain - ## HITS:1 COG:no KEGG:Arch_0128 NR:ns ## KEGG: Arch_0128 # Name: not_defined # Def: endonuclease/exonuclease/phosphatase # Organism: A.haemolyticum # Pathway: not_defined # 71 316 78 332 339 80 29.0 1e-13 MLHALRRPSVIFGAGLGLLVSLLCFFPAAFSLHTVTGFVHFTAMRPFALATVGAAVLVGF LAWALFRSPMLLSMLVVVALFTAGVGVQWASKGLRNSAEVAAPSGDSLTVVSANVLIGNN SYDRLFQRIRDTDADIVAMQEAAHTTVEDKLEKYGLVDKYLVTPETPTASPTDADSLLLV KKNLKPQVIDSHTLPFATAGVRTSIGEVYSVHAHAPVQRSVDQRNWARSVKTERDLCEHA TLLAGDFNATTDSPLMRTGRCVDAADELKMGARGSWPSSWSSLLGARIDHHLYNHNVLTP YKGEMFVVDGSDHRGLQLSYAVQGN >gi|294971151|gb|ADNU01000046.1| GENE 51 49425 - 50657 1050 410 aa, chain + ## HITS:1 COG:Cgl0241 KEGG:ns NR:ns ## COG: Cgl0241 COG1167 # Protein_GI_number: 19551491 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Corynebacterium glutamicum # 10 406 24 422 426 383 49.0 1e-106 MENLAQAQAEYNAFKERGLSLDITRGKPSAEQLDLSAELLTNVTNETATSADGVDTRNYG GLKGLTELREIFSSLLRVPTEQLYAQGNSSLVLMSQILQFHLLHDSPDGSAWAGQKRAIL CPVPGYDRHFGLAESLGFELIPVEMDDEGPVLEQVAEYTKREDVKGMWVVPAYSNPTGVN VSPERAKALAELPATPDFKLLWDNAYALHHLGENDQAPVLDILDVCRQAGNPNRVWIFAS TSKITQAGAGVAFIGSSQQNMEWYEACLSPTSIGPDKINHLRHARFFRDADGVRAHMQAH AAILQPKFEVTEKILDRDLGNVEGVSWTKPHGGYFITLTVPNGTATRTVELAAQAGVKLT PAGSTHPYGEDPTDSIIRLAPSMPPLEELEAAVEGLVACVRLAVAERGDK >gi|294971151|gb|ADNU01000046.1| GENE 52 50671 - 51165 352 164 aa, chain - ## HITS:1 COG:Cgl1563 KEGG:ns NR:ns ## COG: Cgl1563 COG0242 # Protein_GI_number: 19552813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Corynebacterium glutamicum # 1 164 1 169 169 118 41.0 6e-27 MANRTIRTFGDPVLRTVCEPVTQFGESTVALAQDLLDTAAPEGRAAVAAPQIGVAVRAFG YDLHGRRGVVFNPEVVTRGERRDIDEGCLSVPGLFFPTPRYEFATVHGVDEHGQPIEVSG DGVFAQMLQHETDHLNGVVYVQTLPSERRKEAMRQIRQSDWFMK >gi|294971151|gb|ADNU01000046.1| GENE 53 51158 - 54559 3059 1133 aa, chain - ## HITS:1 COG:MT3045 KEGG:ns NR:ns ## COG: MT3045 COG1038 # Protein_GI_number: 15842520 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 1131 1 1126 1127 1419 67.0 0 MFKKVLVANRGEIAVRAFRAAYELGASTVAVFPYEDRNSEHRLKADEAYLIGEKGHPVRA YLSVDEIIRVAKESGADAIYPGYGFLSENPDLARACDANGITFIGPAADVLQMAGNKVDA LDAARRADIPTLASTRPSADLDKLLAESEDMEFPLFVKAVAGGGGRGMRRVNSRTELVDA LKAAMREAEGAFGDPTVFIEQAVQRPRHIEVQVLADNDSNAVHLFERDCSIQRRHQKVVE IAPAPHLEPEIAQALHEDALKFARALGYQNAGTVEFLLETEGPRKGKHAFIEMNPRIQVE HTVTEEITDVDLVQSQMRIAAGASLEELGLTQDKIHIKGAALQCRITTEDPANSFRPDTG TITAYRSAGGAGVRLDGGTVYAGAEVSAHFDSMLVKCTTRGRTFEQAASRANRALAEFRI RGVATNIGFLRAVLADPAFQAGDLATTFIEERPYLLEAKVGADRGSKLLEYLANVTVNRP HGSSPVALQPKDKLPAFDVSGEAPAGSRQKLQELGPVGWARALREDTALRVTDTTFRDAH QSLLATRVRTRDLVDVAPYVARMTPELLSVEAWGGATYDVALRFLAEDPWERLEKLRDAM PNLNLQMLLRGRNTVGYTPYPTKVTDAFIEEATRTGVDIFRIFDALNDVNQMRPAIESVR NTGTAVAEVALCYTSDLNNPNEKLYTLDYYLNLAEEIVQAGAHVLAIKDMAGLLRPAAAK KLVAALRSNFDLPVHVHTHDTAGGQLATLIAAAEAGADAVDAASASMAGTTSQPSLSALV AAFENTERDTGLNLRNVEDLEPYWESVRNVYKPFESGLPGPTGRVYKHEIPGGQLSNLRQ QANALGLGEKFEEIEDFYAAADKVLGHLVKVTPSSKVVGDLALHMVAVGADPEDFAENPQ NYDIPDSVVGFLSGDLGDPPGGWPEPFRTKALEGRTHKAPVSELAPSDSKLLDEPGEVRR DTLNRLLFPQPAKEFLNMRDTYGDLSVLNTTEYLYGMAEGEEHAVVIDKGKALLLGIQAI GAADERGMRTVMCTLNGQLRPLSVRDESIKVDVAAAERADTSNPGHVASPFAGVVTLQVK EGDEVKAGQTVATIEAMKMEASITSHIDGTVSRLAIGPVAQLEGGDLVVVIDG >gi|294971151|gb|ADNU01000046.1| GENE 54 54720 - 55826 458 368 aa, chain + ## HITS:1 COG:lin1687 KEGG:ns NR:ns ## COG: lin1687 COG0420 # Protein_GI_number: 16800755 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Listeria innocua # 1 346 1 348 374 186 31.0 9e-47 MRFLHTSDWHLGRTFHGVDLTEAQTRFTEHLVEMAIEGSYDAVIVSGDVYDRAVPPIDAL HLFDHTIARLAEAGIRVIASSGNHDSFHRLGFSRRQLDRVGVHLRTHLEDVLWPVDLGDC VVYAIPYLEPALVWRNLNVARKHQAVIARCVKDIRAHALKHFPGIPIVVMAHAFVTGATP SESEREIGVGGVGNVGSDTFEGIAYTALGHLHRPQEVTDGVVYSGSPIPYSFGEVRIPKT VHDVQIGPNGVSYHAIELPTFVRAKSVQCSFEQALTADWSDQDVLVELELTDNKRVPQAL QKLKEKIPNLIHMRWVAEDKKRTTAVHAPIKRMTDDEVFQGFMRFVTDNDPSREDFELFH NALRGAQS >gi|294971151|gb|ADNU01000046.1| GENE 55 55823 - 58798 1180 991 aa, chain + ## HITS:1 COG:lin1686 KEGG:ns NR:ns ## COG: lin1686 COG0419 # Protein_GI_number: 16800754 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 991 1 1023 1023 276 27.0 2e-73 MRILNLTIEGFGPFAGKEQIDFDHLTQEGLFLISGPTGAGKTSILDAICFALYGKVPGSR GKVKQLRSQFATPDTPTRVTLDCEVRGKRFKIERSPSYERPKQRGSGMTTQPSSVSYLEY IAGEWVGLSRKYDEVGQIVEDTVGLNGEQFTRVIMLPQGEFSAFLRAEAADRETILERLF GTERFGRAASFLTGMQTDANRSTADIRARRAEKITAMLKSAQIPAIPQLTKSTSLTNVGA TATVALIEEENRLQTAQYVNDLAQKRKESSTLHLEKLNQRYSDAEHFVKHRGIEQQYNPE AHAQLTQRVQRMREAHTIAPAWDEYQRAQKHVEHVRTQREEAASPFDNRSNELQELLEAT RKSRSARSEHERLTAHKKKLEDQLAEYTARRESLIEHVEKTRAELGVLDDPQAFLHTLDQ VKTALEESTAVRDHVLEVSSELQRVERICERLSDKVEDARVHVQGAREAYHEIRTERLAG IAGELAAELHHDEACPVCGSTQHPSPAHRQQSALGQDHEDQAFSAMSEATEHLSELSNTY ATHLAILEELKKQRKQLPESSEIERQCLHNQAEYKRIQGEYERLLSTREKLHTSLRTAED DVETVREKQSECEKDSIRVETRLKQVESDIHLPSSLLGIVNLPAPVDAPGTVALEDRVQS LIEQVNKSARLECELQSRTSDLRSRESEWEVAFTSSKFTELDEFLELRNADVDNASHQLH LMEQQATVLRENRASEWYRRGLTETLALEQLADLVRTQQRICEQHSTDYEETSNRLYFAL EQRNKAQQAREEVFDQEREFEAELVHNERIVELAQIVNATSPSNTRRVTLKSYVLGEMFA QVTQAGSERLEVMSGNRYRLEHAYERHTGQSKGGLLLQVVDTFTSEERDPRTLSGGESFM ASLSLALGLADTVAAHAGGIELESLFIDEGFGSLDPQALDAVMTVLDELRTHGRSVGVIS HVEEMQQSIPCKLEVTPSSTGSTTSVMTSGA >gi|294971151|gb|ADNU01000046.1| GENE 56 58884 - 59951 801 355 aa, chain + ## HITS:1 COG:MJECL24 KEGG:ns NR:ns ## COG: MJECL24 COG1192 # Protein_GI_number: 10954513 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Methanococcus jannaschii # 1 242 1 244 259 86 27.0 6e-17 MLVLSVSSLKGGVGKTSVTLGLASAALSRGIPTLVVDMDPQADASTGLDVPVNTPADIAD VLAAPKSKLVKQAITPSGWVEGKHGVLDVIPGSPRAAEFDRPSLSDRYLKRLREAISRNG SKYRLVLIDCPPSLNGLTRAAWTASQRVLIVTEPGLFSVAAADRALRATDELRRRSAAKL QPLGIVVNRVRPSSREQSFRIQELKDMFGPLVLNPPLSERTVLQQAQGSARPIHEWPGKP ASELASAFDSILDRALRSKNMRGRGSSVDNSVKTPAKPTEKPKKPAEAPKNPGKTEKNPA QVEEKSTPMQANKAKKKSSEPTQASDHNANTSSFDAMLSRKVESMKQNKDHKPKH >gi|294971151|gb|ADNU01000046.1| GENE 57 60026 - 60589 506 187 aa, chain - ## HITS:1 COG:MT1879 KEGG:ns NR:ns ## COG: MT1879 COG0789 # Protein_GI_number: 15841300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 8 187 41 225 225 201 59.0 6e-52 MNQSPEVAASQSREAQGLLFNDDLPELNEKIGYRGPVVANVIGITYRQLDYWARTNLVQP SIQTASGSGSTRLYSFRDILVLKIIKRLLDTGVSLNQIRVAVGSLREHGIDDLSEITLMS DGASVFECTSADEVIDLLQGGQGVFGISVGRVWRDVEGTLAELPSERPEAPVTPVDELAL RRAKKIG >gi|294971151|gb|ADNU01000046.1| GENE 58 60825 - 61580 448 251 aa, chain - ## HITS:1 COG:ML0892 KEGG:ns NR:ns ## COG: ML0892 COG0204 # Protein_GI_number: 15827414 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium leprae # 17 237 1 221 244 247 52.0 2e-65 MPQCHIVDAEPSKGERVFYWVLKRILVGPLLKILFRPWVRGIENIPEEGGAIIAGNHLSF MDSIFIPLVAPRPVVYLAKKDYFTGPGIKGRLVRSFFLATNQLPMDRGGGSASEASLKSG LKVLNDGKLLGIYPEGTRSPDGRLYRGRTGVARLVLESGCPVVPVALIGTDKVQPQGRMV PKLRRVGIVFGKPIDFSRYQNVPEDRFLLRSITDEIMYEILRLSGQEYVDTYASTVKTRL LAEKKEPEQNG >gi|294971151|gb|ADNU01000046.1| GENE 59 61566 - 62345 346 259 aa, chain + ## HITS:1 COG:TM1022 KEGG:ns NR:ns ## COG: TM1022 COG1647 # Protein_GI_number: 15643780 # Func_class: R General function prediction only # Function: Esterase/lipase # Organism: Thermotoga maritima # 19 242 12 238 253 85 30.0 1e-16 MALWHAGNMTELTATESVSSPISLRGESSAAVVMLHGFTGSPYVWSDIAHRVHTSTGASV AVPLLPGHGTVWTDMLDCTWEDWVDCALEAVDSALASHDHVVVAGLSMGGTLALETLFSR PEVAAGVLVNPAVFVDSPFARFAGVLSPFVTDVKSIGGDIARPGMSEYAYPRTPLSGVAE LHRGCERVRARLWSVETPVTLMSSSTDNVVASRSSDFIEREAQNVTRVIMRHSFHVATLD YDALAIVQQIERALAREDA >gi|294971151|gb|ADNU01000046.1| GENE 60 62342 - 62755 305 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395938|ref|ZP_06806123.1| ## NR: gi|295395938|ref|ZP_06806123.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 137 1 137 137 221 100.0 2e-56 MKSSDSDGSVPEWERLSEDERVRDEDWDAIVADFGRSTAYNSEVSAEEVTEYLEQREDWE GPVVDKVDLRDAQPARVVSLVALVGGILAIIVVALFVRPVPLWGTVMCVAVAAGGGVGAI FTLPKDRRADDDGGAQV >gi|294971151|gb|ADNU01000046.1| GENE 61 62851 - 64533 633 560 aa, chain + ## HITS:1 COG:Rv2191_1 KEGG:ns NR:ns ## COG: Rv2191_1 COG0847 # Protein_GI_number: 15609328 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Mycobacterium tuberculosis H37Rv # 10 193 38 226 232 178 52.0 2e-44 MTFADLGTDLHDVTFTVVDLETTGANSAQGDITEIGAVKSRGGEIIGEFQTLVRPTRSVI SPFVERLTGITNSMVATAPELASVIPMFLEFAHGSILVAHNAGFDVGFLKEACARLDYPW PGYEVVDTVRLARLCVTRQEVRNHKLGTLATFFNVPTPPTHRALDDARATHHILQSMFEL FGAVGVTTFEDLQGLKQQGWKVRQSKKHLAHDVPHAPGVYMFVDGADRVLYVGSSRDMRS RVTSYFNAAESRGRMAEMVTAAQSIRVIVCPTELEARVREVRLIDELQPPYNRLSKGASR ETWLKLTNEKYPRLSIVRTPPSQQDLALGPFRKNASARAAKDLLERIYPLKRCTAKPERA DFRPCPAGEMGKCGGPCSGITRSEDYVRGIAPVVALLEGTPQAFVGHTMTHLKQLAVQER YEEAATARDVAISVLRAGSRGEQNGSVEKNEHLAAAMVTDHGFDVAIIRRGLLGATEHVP WGTNLQDVSRSLGLTAAQYPHNYRGLAEERSLISTWLFSDGVTLLDLETPISQPTNGYQR ALSDSALGAPKILRRTDHRV >gi|294971151|gb|ADNU01000046.1| GENE 62 64483 - 65562 791 359 aa, chain - ## HITS:1 COG:ML0883 KEGG:ns NR:ns ## COG: ML0883 COG0547 # Protein_GI_number: 15827406 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Mycobacterium leprae # 1 354 3 366 366 212 39.0 1e-54 MSKAQPATMSDVRNWPDLLVGLMRGDHMDSDTSAWAMDQIMSGVVPDVTMASFLVAHHAK GETVDEINGLVRSMYEHAVRIDGLEDSVDIVGTGGDRAKTVNISSTASFIIAASGQRVLK HGNRATSSASGSADVLETLGLQLELGPEAAAELANRENMAFLFANVYHPSMRFIAPVRKQ IAVPSAFNILGPLTNPAHTTMTAIGVADSAMIDLVTGVLNNRGDQAVVFRSRDGLDELSN TAVNDVWEVRNGTITHWEFDATTLDLPRVTKDDLRGGDPAFNASVMERTLSGEHSPVRDV VLLNAAAALVAADSASEGSFTDRLAAKFATVAEVVDSGAARAKLDAVIRASQDLRSAQG >gi|294971151|gb|ADNU01000046.1| GENE 63 65889 - 66425 603 178 aa, chain + ## HITS:1 COG:Cgl2144 KEGG:ns NR:ns ## COG: Cgl2144 COG1845 # Protein_GI_number: 19553394 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Corynebacterium glutamicum # 1 178 29 196 196 146 50.0 2e-35 MFFAALFAMYFTIRSVAPEMWQEETPKLAVPFALANTTVLVISSITCQFGVHKAEHFKPA RTGGIFEIGKWGMIEWYLLSFFLGSIFIGGQVFEYATLVSEGVALNSNAYGSVFYLTTGF HGLHVIGGLIAFLMVVGRAYGAKKFGHREATFAVCVSYYWHFVDVVWVALFAVIYLLH >gi|294971151|gb|ADNU01000046.1| GENE 64 66464 - 67249 716 261 aa, chain + ## HITS:1 COG:Cgl2143 KEGG:ns NR:ns ## COG: Cgl2143 COG2010 # Protein_GI_number: 19553393 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Corynebacterium glutamicum # 6 260 38 308 308 213 44.0 3e-55 MKLLAQRRRHPLALVVLLLVGLLVTGGAYALFTNNSTATAQQASTKDIEAGEKLFISNCK TCHGANAEGTPNGPSLIGVGASAVDFQVGTGRMPLQMHGPQGQVKKPQFSQDEIDQMAAY VASLGPGPALPDEEYLDASKGDPAAGGGLFRTNCAMCHNVVGAGGALTRGKYAPNLSEVS EKHLYQAMQTGPQNMPIFNDANLTPEQKRDVIAYVRSVSEPTSPGGFKLGSIGPVAEGLF IWFFGLGAVVGITVWLTARSK >gi|294971151|gb|ADNU01000046.1| GENE 65 67288 - 68337 960 349 aa, chain + ## HITS:1 COG:MT2251_2 KEGG:ns NR:ns ## COG: MT2251_2 COG0723 # Protein_GI_number: 15841686 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Mycobacterium tuberculosis CDC1551 # 224 340 19 141 145 128 47.0 2e-29 MTSKNLTGTTGQLEQVNGFENPGLPEHKPRLVDSDPQAEKVAERQIAFWFLASMVGTIWF IVSYFLFPLDGTMEALRLQNTMLGLGATVALAGIGIGIVLWAKNLITDVEVVEERHSIAG SEEDQAIALEILNQAKEESGIARRPLLRNMLITAVAIAPLPAVLVLRDLGPLPGNKLFET LWGPGVRLIQDPGGIPHEGAERPIKLADVTIGSAFHVLPEGIAKSDHPLNEKAKASVLLM RVDPRELNTDPAKEDWGIDGVVAYSKICTHVGCPVALYEHQTHHLLCPCHQSTFDVTNHC KVIFGPAKRPLPQLPIAVDSEGYLVAQRDFPEPVGPTFWEIHTRETESE >gi|294971151|gb|ADNU01000046.1| GENE 66 68334 - 69965 1511 543 aa, chain + ## HITS:1 COG:Cgl2141 KEGG:ns NR:ns ## COG: Cgl2141 COG1290 # Protein_GI_number: 19553391 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Corynebacterium glutamicum # 19 471 10 460 539 487 50.0 1e-137 MSNVQVTESKALSDSAKWIEARTGASVAVREFGRKIFPSHWSFMLGEVALYSFIILLISG TFLTLWFKPAMGETIYNGPFLPLKGVEMSEAYASTLAISFEIRGGLFIRQIHHWAALLFM AALSLHALRIYFTGAYRKPREINWMIGVALIAMGMAAGFTGYSLPDDLLSGNGLRIIDGL LKGIPLVGTYISFFLFGGEFPGVDIVSRLYMFHIMLVPAILIALIGVHLMFVVIHKHTQW PGAGHTNKNVVGEPVLPTFAAKGGGFFFLITALLTLISGLFTINAVWNYGPYDPSPVSAG TQPDWYIGWMDGYLRIIPGWFEFYIAGFPISFNIFSALLAAGVLFGGMIAWPFIEQWVTK DYREHHILDRPRNTPTRTALGVAVSIWYLNMWAAASGDLIAVMFHMSLNDMIYIFRVLFF AGPVIGYIITKRVCLGLQRKDREIALHGRETGQIIRLPHGEYQERHEPLSPEKLWVLTSF ESPKYIPAQPNEKGVITKAERNRAKLSKFFFEDRVAPVTKAELDAAHHDHAVESGNDKEQ LEK >gi|294971151|gb|ADNU01000046.1| GENE 67 70632 - 71033 468 133 aa, chain - ## HITS:1 COG:no KEGG:AARI_16690 NR:ns ## KEGG: AARI_16690 # Name: ctaF # Def: cytochrome aa3 subunit 4 (EC:1.9.3.1) # Organism: A.arilaitensis # Pathway: not_defined # 1 133 1 133 133 132 53.0 4e-30 MKSAGWIMLTTAFFFIPVGIVYGFLTDFQEMVGFPALIVTGLMSIMVGGYILLHHKSVGD QPQDNEAGEISDEVYEYGFYSPWSWWPIVLATGAAIVFIGVAVGFWIMPFGAAIALVGLV GLVYEYDRGDHAH >gi|294971151|gb|ADNU01000046.1| GENE 68 71030 - 72742 1559 570 aa, chain - ## HITS:1 COG:ML1728 KEGG:ns NR:ns ## COG: ML1728 COG0843 # Protein_GI_number: 15827927 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Mycobacterium leprae # 14 550 22 552 574 704 68.0 0 MTAVVNETQSSIDGPKVPKSLGKVIVNWMTSTDHKTIGYMYLITSFIFFCIGGVMALLLR AELFEPGMQFIETKEQYNQLFTMHGTIMLLMFATPLFAGFANVMMPLQIGAPDVAFPRLN AFAFWLFLFGSLIACSGFLTPQGAASFGWTAYAPLSNTTYTPGIGGHLWVLGLAFQGFGT ILGGVNFITTIITMRAPGMTMFRMSIFSWNTLITGILILMAFPPLAASLFALGADRIFGA HIFSPENGGPILWQHLFWFFGHPEVYVIALPFFGIVSEIFPVFSRKPIFGYKMLVYATIT IAALSISVWAHHMYVTGAVMLPFFAFMTMLIAVPTGVKIFNWIFTMFKGSLTFETPMLWS IGFLVSFVFGGLTGVILASPALDQQIADSYFVVAHFHYVIFGTVVFAMFAGFYFWWPKWT GKMLNETLGKIHFWLLFFGFHGTFLVQHWLGAEGMPRRYADFLPQDGWTFLNEVSTVGAL LLALSMIPWFWNVWITARNAPKVTVDDPWGYGGSLEWATSCPPPRHNFTSLPRIRSERPA FDANHPELLELAGHPRDSYSLPAKSEGASK >gi|294971151|gb|ADNU01000046.1| GENE 69 72742 - 73632 934 296 aa, chain - ## HITS:1 COG:ML0875 KEGG:ns NR:ns ## COG: ML0875 COG1622 # Protein_GI_number: 15827398 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Mycobacterium leprae # 29 266 34 316 353 147 31.0 2e-35 MDSPNQPVRKSGARWAKRVGVLGGLASTVLLAGCTKEQWEVGFFPPESKGATSHTDHYIA LWNGSWIALLAVGAITWGLMLFCIIAFRRRKNDRGLPVQVQYNMPVEIMYTVLPIILVVG FFFATVNTLDKTVYDDTPGEVKVEVVGKQWAWDFNYLTENAYYGGKQVNLDGTEQPGIDA PTLYLPSNTDVEIELRSRDVIHSFWVPAFLEKRDMIPGRTEKIHLRMDKEGEYLGKCAEL CGEFHAEMIFNVKVVSLDEYKAYTEKLKAEGNEGRLGPELDRTEWYKNPYTKEGDK >gi|294971151|gb|ADNU01000046.1| GENE 70 73747 - 74385 279 212 aa, chain - ## HITS:1 COG:YPO1371 KEGG:ns NR:ns ## COG: YPO1371 COG2360 # Protein_GI_number: 16121651 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Yersinia pestis # 2 185 22 202 236 143 42.0 2e-34 MDPRDLCCVSNELTVPGVLSAYRSGLFPMGLGEQGSGPIGWWSPVRRGALLPGDLRVSKS LRKSMRRFTFSCDNAFPEVVDACADPDRPGAWITPDIRDLYCKLHDLDVAHSVEVWRDGC LVGGLYGVWLGRLFAGESMFHRVTDASKAALVELVRTLDAECGDTWIIDTQWQTPHLASL GVSQMWAGEYRDRLELALHDVDFSGISHKSGS >gi|294971151|gb|ADNU01000046.1| GENE 71 74423 - 74764 391 113 aa, chain - ## HITS:1 COG:ML0871 KEGG:ns NR:ns ## COG: ML0871 COG0316 # Protein_GI_number: 15827394 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 3 113 8 118 118 157 70.0 4e-39 MTATATHGVELSTVAADKVRSLLEQEGRDDLRLRIAVQPGGCSGLIYQLYFDERVLDGDA VRDFDGVEVIVDRMSVPYLDGSTIDFSDTIEKQGFTIDNPNAQGSCACGDSFS >gi|294971151|gb|ADNU01000046.1| GENE 72 74845 - 76263 1217 472 aa, chain - ## HITS:1 COG:MT2598 KEGG:ns NR:ns ## COG: MT2598 COG0624 # Protein_GI_number: 15842054 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 37 451 35 443 470 366 48.0 1e-101 MTNNSHPAQAGHPDSAVSDVLTPESLRAALDAEFDRVLAQLSELVSIESVAWPAYDRAHV EKSAEVVAEMARELSFDSVEILTAATPSGEEGYLAVVARKAAPEGRPTVVLYAHHDVQPT GDVALWNTEPFVATVKGDRMYGRGAADDKAGVMVHLAALKLLGDKLNVGVVLFIEGEEEA GSPSFNNFLHTYRDKLEGDVIVVADSGNWAERVPALTVSLRGMVALEFSLTTLNHSVHSG MYGGLVPDAGMAMIRLLNTLHNDDGSVAVEGLVQNEDVANDYDEATIRKDSGVLDSTELI GSGPFASRVWSKPALTVIGIDIPDVDHSSNTLQASVRAKVSMRLAPGQDPQDALSKLKQH VEENVPFGATLEFGPEESGAPWQANLDDPRVAVAKQAISDGFGTDVVDMGLGGSIPFIAD LLEVFPQASILVTGIEDPDTRAHSANESLFLPDFKSAIVSEALLLHRLGQSE >gi|294971151|gb|ADNU01000046.1| GENE 73 76276 - 76893 650 205 aa, chain + ## HITS:1 COG:no KEGG:Lxx15070 NR:ns ## KEGG: Lxx15070 # Name: not_defined # Def: hypothetical protein # Organism: L.xyli # Pathway: not_defined # 8 204 18 212 213 171 49.0 2e-41 MLGVFGRKKDKATDAQEVEQNTAPEEPTVRDAEAKKNRPTPTRKEQEAKRKRSLVPDDRK EAKRKYRAEMAKQRDEARRGVLEGDERYLTARDRGPQRRYVRDFVDARFSIGELLIPVAV VVLIVGIFSNQQIQLYATIVVYGLFALIILDSIFLNYQLRGRMAQKFGGKENLERGLGFY ATMRAIQLRVLRTPRAKVKRGEYPS >gi|294971151|gb|ADNU01000046.1| GENE 74 76868 - 78049 961 393 aa, chain - ## HITS:1 COG:Cgl1482 KEGG:ns NR:ns ## COG: Cgl1482 COG0167 # Protein_GI_number: 19552732 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Corynebacterium glutamicum # 37 390 12 347 371 291 49.0 1e-78 MQKHSKPTLKPGLLALVTFLPFIGFFSILDQPAGYHECVYDFLFRNALTHVDPERAHHMS MTALRALDMAGLGSYLAEMYGTAPDPANVLGLRFPNRVGLAAGFDKNGSAIRALARLGFG HIEVGTITAHSQPGNPKPRLFRLTDHGAILNRMGFNNDGARQAVFNIRAELKKLRVLPES RRPIVGINIGKTKVVPAEDAVSDYATSARLLSPLADYMVINVSSPNTPGLRDLQAIDTLR PIVDAVRAEADEAVRNPRSTLGHVPLLVKIAPDLNDQDILEVTDMCIDTGVDGLICTNTT INREVLSGKDKELAQAEAGGISGRPVADRSLEVLRLIRSHTDALTLVSVGGIETAAHAHE RLAAGASLVQGYTGMIYRGPGWASQITKGIRHA >gi|294971151|gb|ADNU01000046.1| GENE 75 78004 - 79464 1482 486 aa, chain + ## HITS:1 COG:Cgl2156 KEGG:ns NR:ns ## COG: Cgl2156 COG0260 # Protein_GI_number: 19553406 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Corynebacterium glutamicum # 49 486 77 512 513 344 46.0 2e-94 MPTVPVSVSASNVSASKVKADILVVAKTHNGAVLAELDKTVVKELTGALDAIDFAGKAGS SVRVAAPKGVSAKSVAVIGVGEVEKLEDDLEKLRQHVGSFTRGLDAEVSVAFALPTPTAE VAAAITLGAVLGAYRYNDYVSEKKKTASEITVITAKKFKDAVEEARIIASGVTGARDLVN QPPLDLYPETFANRVSELSKGRKVKATVYDAKYLEENGYGGLHGVGRGSARGPRLVKLEY SPKKAEKHLALVGKGITFDSGGLSLKPAQSMEEMKSDMGGAAAAAHTLFAVADLGLNVKV TAWLCLAENMPDGNAQRPSDVVTILGGKTVEITNTDAEGRLVLADGLVSAQKDNPDLVID IATLTGAQIVALGKRTTGVMGTEAARDNVCEAAHAAGEQMWPMPFPEEIRDQFRSATADL KNSGTREGGMLAAGIFLKEFIEEGTEWAHIDIAGPSFTTSPWGYTPEGGTGVPVRTLIEV ARGLSK >gi|294971151|gb|ADNU01000046.1| GENE 76 79645 - 81036 741 463 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 460 2 457 458 290 37 3e-77 MVDSKNSYDLVILGGGTAGYSAAIRASQLDMKVALIERDKVGGTCLHRGCIPTKALLHVA EIAHSVRDSKSFGILSEFHGVDMEAAIKFKDGIVDRNYKGLSGMIKADGVDLISGEAKLK DQSTVTVSTDEGELELNAKNIILATGSEPKTIGIEIGGRVLTSTEALSHTEVPGSAIVLG GGVIGCEFASIWSSLGSEVTIVEGLPRLVANEDADISKELEKAFRRRKIKSKLGVKFKSV EQDDNGVKVQLEDGSELEADVLLVAVGRGPVTADFGYEEAGIKLDRGFVVTNERLHTGVG NIWAIGDIVPGLQLAHRSFGHGIFVAEEIAGLEPTPVDENGVPRATYSEPEIFSVGLTED QAKEKYGEDKIASVKFPLGGNAKSAILKTNGFVKAVRVKEGPVVGLCGIGARFSEQVGEA QLIINWEAFPEEVAHLIHGHPTQNEAIGEAMLALAGKPLHFHN >gi|294971151|gb|ADNU01000046.1| GENE 77 81052 - 82851 2020 599 aa, chain + ## HITS:1 COG:ML0861 KEGG:ns NR:ns ## COG: ML0861 COG0508 # Protein_GI_number: 15827386 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Mycobacterium leprae # 1 599 1 530 530 464 50.0 1e-130 MSNSVQMPALGESVTEGTVTRWLKEVGEEVEVDEPLLEVSTDKVDTEIPSPYAGVLEKIL ADEDDVVEVGGDLAIIGDGSGGGDSSDEDTEEETQEETEDDSEEESAEDASSDDSAEEDS ADDASAEKAEGSKPASSGESSEVPMPALGESVTEGTITRWLKEVGEEVEVDEPLVEVSTD KVDTEIPSPVAGVLLEQLAAEDDEVEVGAPLARIGSGDASADDSSSQDDEPKEEPKEEPK AEEAPKEAPKEEPKAEEAPKEEPKKEEPKKEADASAEVKTQSVRGMSRPNAGAYVTPLVR KLAREKGVDLDTVEGTGVGRRIRKEDVLNAVSSSPAATTSAPVAPKGPHTVEIPEDVKKL RGTTQKASRIRRTIASRMRDSLQNSAQLTQVIEVDMTRVSRLRKQHKDTFQSTHGVKLTY LPFFAKAVVEALQVHPKVNAQYDVDAKEITYFDHENLAIAVDTERGLLVPVVKDAGGMSL AELSKSIDDLAERTRSGTIGPDELSGGTFTITNIGSVGALFDTPIINSPQMGILGTGVIT KRPVVVKTEDGEESIAIRDMVYLPLTYNHELVDGADAGRFLQTIKARLEEGNFEADLDL >gi|294971151|gb|ADNU01000046.1| GENE 78 82910 - 83641 183 243 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395956|ref|ZP_06806141.1| ## NR: gi|295395956|ref|ZP_06806141.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 243 1 243 243 332 100.0 2e-89 MEPIEEYLRNLHRKNNSSTSQSSFPSKEEEPEAPEPLNKQSPDAANAPTTELPTVVAALR KNEPEGTQKQGTRKQASRTQPTRRKRRTQKRPRRYDLIIMAAGVVLVAVIVVLAFVPRGS EQTVAQSAPSGSEKRPTHEESAHDAVIRLCNERALAFSTADEKLLRSLTADGSPARQAEK FDDLHKYGGVDIAIDATDIDVVSETNDSAVVTATVTAHPEKGVRLTLTLKKVDKRWRVWE VTE >gi|294971151|gb|ADNU01000046.1| GENE 79 83743 - 84435 661 230 aa, chain + ## HITS:1 COG:MT2274 KEGG:ns NR:ns ## COG: MT2274 COG0321 # Protein_GI_number: 15841708 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Mycobacterium tuberculosis CDC1551 # 4 211 7 204 240 197 52.0 2e-50 MFVTLYLGVDTIRSRVIGMAFIVEKLGFAPEFVDYTDALDVQNQYHSDVVNGTRESTLLV IEHSATYTAGKRTEPHERPQDGTPVIDIDRGGKITWHGPGQLVVYPIYRLREAHQVRLYV DQIEKAGIALLAEYGIQAGQVEGRSGVWLPATDTQPERKILAIGIRIHQGVAMHGLALNC SNSNAGFDMIVPCGIADAGVTSISAEIGRTVNPSDVADRLIELLNEHITA >gi|294971151|gb|ADNU01000046.1| GENE 80 84450 - 85490 778 346 aa, chain + ## HITS:1 COG:Cgl2160 KEGG:ns NR:ns ## COG: Cgl2160 COG0320 # Protein_GI_number: 19553410 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Corynebacterium glutamicum # 1 343 1 341 348 456 65.0 1e-128 MTIAPEGRKLLRVEARNQQTPIEDKPKWIKAKANIGPEFTELKSLVRNSKLNTVCEEAGC PNIFECWEDREATFLIGGEQCTRRCDFCQIETGKPQELDRDEPRRVAESVAKMGLRYSTV TGVARDDLPDGGAWLYAETVRRIHALEHPDGQGTGVELLIPDFQNRDDDLDEVFSSRPEV LGHNLETVPRIFKRIRPAFRYERSLEVLTKARKAGLITKSNLILGMGETNEEAIEALRDL HEAGTDLVTITQYLRPSSLHHPIDRWVKPQDFVELRDAALEIGFLGVMSGPLVRSSYRAG RLWAGAMRKRGQEIPAHLSHLDKEFPAKQEAQSVVDTFGAGEEVKF >gi|294971151|gb|ADNU01000046.1| GENE 81 85521 - 86255 862 244 aa, chain + ## HITS:1 COG:no KEGG:Arth_1603 NR:ns ## KEGG: Arth_1603 # Name: not_defined # Def: integral membrane protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 2 244 13 254 254 211 49.0 2e-53 MADKEKRSRGLFKRKPKDPANPGRIAQMREVFKLARKHYPALPWIMLAAVAGITLVGVLI GLLLPPVWLWGILGFMGGIVFALWILGRYAEKAAFAEMRGKPGAIGAVLNSARRSWLMDE QPIAVDPRTKDMVFRSTGRGGVVLVSEGPANRTYKMLEKERKRHERVLPNVPVTIIQAGD GKDQVPMDNLVSTVHKLPRKLHKDEVLAVRKRLSSLGSMTSRPPIPKGIDPNRARPDRRA IRGR >gi|294971151|gb|ADNU01000046.1| GENE 82 86257 - 86706 395 149 aa, chain - ## HITS:1 COG:no KEGG:Arth_1601 NR:ns ## KEGG: Arth_1601 # Name: not_defined # Def: RDD domain-containing protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 26 148 22 144 145 110 43.0 1e-23 MGAGGRAHRYTGRVNRTAGSQSANDYPGKKYGFPQSGRGSVAPVIRRLGALFIDWGIAFG LSVLFFDNNEWVTWVLYSLEVLIMLPLLGYTIGYRVFGLLLMTTEGQKVNVLRVLLRHLA FCLVIPAIIYDPDRRGLHDYAGKSVVVRS >gi|294971151|gb|ADNU01000046.1| GENE 83 86843 - 88267 1474 474 aa, chain + ## HITS:1 COG:Cgl2165 KEGG:ns NR:ns ## COG: Cgl2165 COG0174 # Protein_GI_number: 19553415 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Corynebacterium glutamicum # 2 472 3 475 477 600 62.0 1e-171 MFSTPSELVAYLADHDVKFVDVRFCDLPGVVQRFNLPASAYGEDEIRDGLLFDGSSVRGF QTINESDMKLLADVSSAYIDPFRDAKTLVVNHSIVDPFTDEPYSRDSRQVAAKAEAYLKS TGIADTVFFGAEAEFYMFDEIRYSVTPGHSFYKIDSEEAAWNTGREELGGNLGYKTPMNG GYFTAGSQDKDADIRDEISLTLESIGFEMERAHHECGTAGQQEINYKFATLQKAGDQLLD FKYIVRSVAEQRGKTVTFMPRPLMDDSGSGMHCHQSLWKDGKPLFYDENGYAGLSDLARW YIGGLIEHAGAVLAFTNPTINSYRRLVPGYEAPINLVYSARNRSAAIRIPVTGDSPKAKR LEFRAPDPSSNPYLAFSAQLMAGLDGIRNRIEPPEPVDKDLYELPPEELQDIKHVPASLE EALDELDNDRDFLTQGDVFTDDLIDTWINYKRTHEIDVMRLRPTPTEFELYYSL >gi|294971151|gb|ADNU01000046.1| GENE 84 88345 - 89787 404 480 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 470 1 448 458 160 26 4e-38 MAHFDLLVIGTGSGNSIVDDRFSHLKVAIAEEWLFGGTCLNVGCIPTKMLVYPAEVAHSS ADSTHLNLQTSFNGVDWPGLSHRIFDRIDAIEADGRDYRTNRLDNVTVYPDRVHFTGRNS AQTASGDTFTFERVVIATGSSPTQLKAAGLDWDRVDTENYPVKTSNSIMRIPTLPRSLVI VGSGFVAVEFAHIFSSLGVEVTVLARGNRLLGNHDHDVSQAFTQQFSESVNVRFGVEVES VDTADGVTLTLKETGRAEGADTSAVEADLMLVAVGRTRSTHALNVDALDATTDGDRLVVD EYQRVMSSSGEPLDGVWALGDVCSEHLLKHVANAEARTVQHNILVDVGLEPTPVSTDHSV IPAAVFSHPQIGSVGATEEQLREEGVDFVSSTCEYGGVAFGWALNAPGFAKVLAHKTTRQ ILGAHVVGEQAASLVQLFVQAMAFKIPADKMARGQMWIHPALTEVVENALLGLNFGEDGR >gi|294971151|gb|ADNU01000046.1| GENE 85 89784 - 92696 1955 970 aa, chain - ## HITS:1 COG:MT2279 KEGG:ns NR:ns ## COG: MT2279 COG1391 # Protein_GI_number: 15841713 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 13 962 49 992 994 593 41.0 1e-169 MLGTQLAQDPESALAAAADRDSAALGLVRIAEACQQNDINLRQLLDESPILLNRLIIVSG GSEATVDHLVRWPQFIRTLAHEPDFIDSLASTPEALEDTFTEALADKGSLLTGDEGITAL RRTYRDLVTRLVVQDLEHAQPEEIVEDVTRVLSDLAAAVFQAAYKIAEVEQGERLRARIA VVAMGKCGARELNYVSDVDVIFAYAPREGEELDDEVREQATHLATRVTELISGGAHEPAL WEIDTALRPEGKSGALVRTIDEFVQYYQKVAHNWEFQALLKARPIAGCPELCEQFEDDVS PFVWTAGARSGFVSEVRSMRRRVVSLIPKNELDRHIKLGPGGLRDVEFTVQLLQLVHGPH DEDLRVRSTGGALRILSSHNYLASHEARTLASAYRFMRVVEHRLQIPRMAREAVLPERAS KLRALARSVYPVEERSVDRLKKELAGHMRAVRALHKQIFYRPILDAATGSAQMSTVSEAV ARDRLTAFGYQDPAAAMRHIRALSTGLNRVAYVQRQVLPALLDWFSRGVDPDAGLVAFRR LSEGLSHTTWYLAMLRDSGVAVKNMARVLSLSRFASDLLISHPQSVQWLGNNERLQPSEP DAIATRMRERSRRRDDGVAAIRKVYGEEILRTSLADTLGLYDLDTVMTALTNAMDITVHQ ALSHVRMRLDAMSGIDDYRFCIIAMGRLGGAEIGYYSDADVMFVYEPGETLTPAQREALP SHAKQVALTLTSELETRSAEPIVDIDADLRPEGKSGPLVRTLSSYAKYYAAWSEPWEAQA LLRARPIAGDEELGQAFTRLIDPLRYPEEVPESSLMQMRRLKARMESERLPRGGDKKRHL KLGTGGLSDVEWTVQMLQLQHAHTHPGLRTTSTLDALHAATQNGLIDEDSAHKLEAAWTI ASRVRSAAVLYKGRGSDSLPTDETELEAIALLLGYEPGGGYQLVDDYLGATRRARKVMEH VFFGFEPEDI >gi|294971151|gb|ADNU01000046.1| GENE 86 92774 - 94111 1126 445 aa, chain - ## HITS:1 COG:MT2280 KEGG:ns NR:ns ## COG: MT2280 COG0174 # Protein_GI_number: 15841714 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 443 1 445 446 552 60.0 1e-157 MTDHRRYVLQTIEDKDVRFIRLWFSDVLGRLKSVAIVPAELESAFDEGIGFDGSSVEGFA RIYESDMVLKPDASTFELLPWRGGDDPTGRIFCDINTPEGVPASADSRQVLKRTMEKAAQ MGFTFYVHPEIEFYLFKSGELNGQPPVPVDTAGYFDHVNGGTANDFRRAAVQMLEEMGIS VEFSHHEGGPGQNEIDLRYADGLTMADHVQTFKTVIKEVALERGVYASFMPKPLADEPGN GMHTHMSLFEGDDNAFYEPGARYQLSKIGRQFVAGILKHAPEFCAVTNQYVNSYKRLWTG HEAPSFICWGHRNRSALVRVPQYKSGKSSSARIEYRGMDSSANPYLAYSVLLTAGLKGIE EEYVLPLEAEDDVWQLSNNERRALGIEPLPSSLSHAVHNMEHSELVAETLGEEVFDYFLK NKRDEWSQYRAQVTQFELSRHFNSL >gi|294971151|gb|ADNU01000046.1| GENE 87 94108 - 94302 271 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395965|ref|ZP_06806150.1| ## NR: gi|295395965|ref|ZP_06806150.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 64 1 64 64 82 100.0 8e-15 MADTGDEKFFFNLETGQVEKGKVSAWDKRMGPYDTQEEAQQALETAQERTREWDQDDQRW ENNS >gi|294971151|gb|ADNU01000046.1| GENE 88 94474 - 95589 1208 371 aa, chain + ## HITS:1 COG:MT2850 KEGG:ns NR:ns ## COG: MT2850 COG0686 # Protein_GI_number: 15842318 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 370 1 370 371 417 59.0 1e-116 MHISVPTEVKNNENRVAVTPAGVTELVRAGHTVTVQKGAGVGSAISDEQYIEAGAQISNT AEETWKAGEMVMKVKEPIASEYGFLREDLTLFTYLHLAADEPLTKALLEAGTTSIAYETV QLENRGLPLLAPMSEIAGRLAPQVGAAELLSPRGGRGVLLSGTPGVERAHVTVIGAGVAG TNAARIAAGMGAHVEIIDINIARLRQIDETFGSLMQTTVSNAYEIERALSTSDLVIGSVL IPGKRAPKLVTDDMVKNMRKGSVLVDIAIDQGGCFENSRPTTHDDPTFKVHDSIYYCVAN MPGAVAATSTRALTNATLQYATKIASMGWKDAMRKDPALAKGLNTDAGHVTNDAVAEAFN MEFTPVDEILK >gi|294971151|gb|ADNU01000046.1| GENE 89 95654 - 96523 725 289 aa, chain + ## HITS:1 COG:ML1576 KEGG:ns NR:ns ## COG: ML1576 COG0024 # Protein_GI_number: 15827827 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Mycobacterium leprae # 7 285 7 284 285 384 65.0 1e-107 MTSIGNLTKGTVSPQLSVPSSIPRPEYVGKREPTEGLGGNMYTDEEIERVRIAGRIAANA IVEAGKACIPGNSTDQIDKIAHEFLLDHNAYPSCLGYRGFPKSICTSVNEVICHGIPDST VLQDGDIINLDITAYIGDMHGDTNYTFLVGDVDEESKLLVERTYEATMRGIKAVKPGREI NVIGRVIEKYANRFGYGVVRDFTGHGVGRDFHTGLIVPHYDAAPAHNEVMEPGMIFTIEP MLNLGTEKYDAWDDGWTIVTKDRKRSAQFEHTLVVTETGSEILTLPDQE >gi|294971151|gb|ADNU01000046.1| GENE 90 96536 - 97318 582 260 aa, chain + ## HITS:1 COG:Cgl1864 KEGG:ns NR:ns ## COG: Cgl1864 COG1940 # Protein_GI_number: 19553114 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Corynebacterium glutamicum # 8 259 7 247 250 195 42.0 6e-50 MSEQWAVGIDIGGTGIKVACVDWATGTLMDEQLRIPTPQPSTATNVAKAVGQALNELQER SRHTIPDGIRSLPIGLAFPGSIRRGKVTFLGNLDQSWVGEDVSTVFSSVTGAQCLFLNDA DAAGLAEMRFGAGSQAQDKSVLMLTLGTGIGSALFTRGELYPYTELGHITVDGKNGERYA SVSTKDREGLTYEEWAGRLQKYLDQIVLLTNPELIIVGGWISSQHASWLHLIDVPVPVVT AQLHNDAGIVGAALFAHQHA >gi|294971151|gb|ADNU01000046.1| GENE 91 97723 - 98430 473 235 aa, chain + ## HITS:1 COG:Cgl1949 KEGG:ns NR:ns ## COG: Cgl1949 COG3022 # Protein_GI_number: 19553199 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 235 1 245 245 122 37.0 7e-28 MIIFLPPSESKTPHTHGDPLNLDQLSFPELTEDRSHMCDTLMEISARERGWEELGVSQRL APEVERNTELFIASAGPAINTYTGVLYTALDADTVTHEDRLDTVFISSALFGVVSARDHI PAYRYTMTPKLATWWKKRLSPVLDDAWAAEVVVDCRSGAYRRAWPGANTLPVKVVTETDG VRKTVSHNAKHTRGLVARHLLNRGEQMPTTPQGVVDALEEAFTVEYDHPEITIVV >gi|294971151|gb|ADNU01000046.1| GENE 92 98435 - 99157 643 240 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295395970|ref|ZP_06806155.1| ## NR: gi|295395970|ref|ZP_06806155.1| possible Zn-ribbon protein [Brevibacterium mcbrellneri ATCC 49030] possible Zn-ribbon protein [Brevibacterium mcbrellneri ATCC 49030] # 1 240 1 240 240 345 100.0 2e-93 MELTPEQHSATLEWIRVSAQLRKNRADAQQKELKEELTALVAQHKEQAGKIVKLTSHREA VQKQVRELNARSTDLEAEISGREQRMNDGTGLTSSDLVAIGKEIDTLKEKLQRTEDEHLA ALQEEERVTSAVETATEEGHAIAARGKQLQEERARTATTLDAQAQELSSQLAGLAKNMGD FGTQVTQRAQDGPGAATLRAGSCGGCGAALSGTALDALANSGPYSVAECEACESYVIKEG >gi|294971151|gb|ADNU01000046.1| GENE 93 99141 - 100025 762 294 aa, chain - ## HITS:1 COG:CAC1303 KEGG:ns NR:ns ## COG: CAC1303 COG0327 # Protein_GI_number: 15894585 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 8 277 7 268 268 129 30.0 9e-30 MTHATLGDIIAHIEKLWPTEYAESWDSNGLATGDLNARVSTILMALDPMDAVIDEAVSLK AELLFTHHPLLLRGVTSVAAHTLKGGALTRLISHGIAQYNAHTNADSAQGGVSDVLADML ELTDRQPITSGPNHPEGVGLGRVGTLPQPRTVSELAHTLARSTPATKTGIRVAGDPNATV SRVAVLAGSGDSLFDEVRAHGADVYVTSDLRHHPATEARDISHRTSNTPHLIDVAHWAAE SPWMSIAATQLGEKLKENGFDVDIHVSTTRTDPWDLRIPSHDDAQGEDDHGTHA >gi|294971151|gb|ADNU01000046.1| GENE 94 100149 - 101663 1491 504 aa, chain + ## HITS:1 COG:AF0687 KEGG:ns NR:ns ## COG: AF0687 COG0318 # Protein_GI_number: 11498295 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Archaeoglobus fulgidus # 7 503 25 541 549 328 37.0 2e-89 MTSITAVNRSTISDVIRRSTSRVPDKTAIVFDDRSWTYAQLESAVTSVARHLVSQGLEKG DRVAAFDKNSDLFAILFLACTRAGLIHVPINYQLTREELEYMLENSGAKRIYVGSDFIRH VQSAKAENVEIVPFADLLEVAQQTDVEPSEPGEFDVVDTDIAQLLYTSGTTSLPKGAIMT HRALLTEYQSALLTLDPEESDRWVHALPLYHSAQMHVLLIPSLMKGSFNIIVPAPVTGQL LEIIERERITAFFAAPTVWVAIAHHPDLQTRDLSSLKRAMYGASIMPGPILKKLRETLPN LGFYNCMGQSELGPLAIVLRPEEHDERPDFAGRPVPFVETRLADPEGNDVAPGEQGEILY RSPQLCLGYWDKPEATEEAFAGGWFHSGDLAVADEQGYIKVVDRVKDVINTGGVLVAGRQ VEDSIFELDAVEEVAVVGQPDEKWIEAITAYVVVKEGQELDETTVIEHVKERLAAFKAPK AVHFVDALPKNSAGKILKRKLRES >gi|294971151|gb|ADNU01000046.1| GENE 95 101700 - 102380 316 226 aa, chain - ## HITS:1 COG:RSc1157 KEGG:ns NR:ns ## COG: RSc1157 COG2258 # Protein_GI_number: 17545876 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 35 214 34 216 241 121 36.0 1e-27 MHTKFTGTVTHLWVGKAQWQNYSGRDIFTGAHKHLVDTVAVHTHGAEGDEQGNRKVHGGP EKALLLYTQDDYTQWAADGHQFQPGNFFENVTVDGIATSDVHLADTLQIGEVTVQVSQIR RPCTTLAHRWNMKELPRLVQSTGRSGFYVRILQPGTIRMGDTVTVIKREPRSVALPEVNR VMNIDRTDAQGIRSLIDAPGMPPRWVEQLQRRLSGYVTDESARLGD >gi|294971151|gb|ADNU01000046.1| GENE 96 102568 - 104424 1531 618 aa, chain - ## HITS:1 COG:L96595 KEGG:ns NR:ns ## COG: L96595 COG2217 # Protein_GI_number: 15672077 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 49 602 46 592 593 456 45.0 1e-128 MGTLLRRYMWVVLTCVIALLYGVLALSGQKTLGTWIGGVYVAIFIVVTLVGMIRDIVRGN WGLDILAVVAMVSTLAVGEVLASIVVVLMLSGGEALEDYAQHRAARDLENLLKHSPAIAH ILEGGTPRDIDVEDVEIGDQLLVKPNEVVPVDCKLNSDTASFDESSLTGESLPVTKTAGD EILSGVVNSTTAVTVTATKKAHESQFQQIVALMSKAEENRAPIVRLADRYAIPFAVLSLV IGGVAWFVSGSATRFAEVMVLATPCPLLIAAPVAFIGGQAQASRNGVIVKSGAVLEQLSR IQSALFDKTGTLTRGTPEVTRVVPAHGWDEDELLRLTASAEQYSTHALARGIIEAARNRK LSLSDTDTADEVATNGVWAVIDGHDLRVGKKSFIEESVGSIEAPTLEPGEGAAFVAIDGA YAGTVMLADQIRPETPRVISWLRDNGVKNVSMLTGDNVHTAQHIAQLAGIDDVKADLLPP DKVRLAGETKPSPVLMVGDGINDAPVLARADVGLAIGAKSATAASEAADGVILRNSLRSV VEVVAISRHTVSVALTAIWLGIILSVGLMLVAAMGAIPAVFGALTQEIVDLVAILYALLA LRSPRTLKKLREEEHTAP >gi|294971151|gb|ADNU01000046.1| GENE 97 104495 - 104995 378 166 aa, chain + ## HITS:1 COG:Cgl2053 KEGG:ns NR:ns ## COG: Cgl2053 COG1309 # Protein_GI_number: 19553303 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 3 143 7 146 191 72 34.0 3e-13 MALSTDIITDAALKIASEFGLGDLSMRRLARELEVQPSALYWHVANKQEVFILVARRMSE QVDLACGTPPHTFTQVAVHLRRILASYRDGAEVFLLAFALKGEEVTPQVLQGAVRATFPE AHQAVLERLISFVVGFVAIEQNRELYGTTGVSNNEDFEAAIQLLVD >gi|294971151|gb|ADNU01000046.1| GENE 98 105050 - 106660 1273 536 aa, chain + ## HITS:1 COG:AF2258 KEGG:ns NR:ns ## COG: AF2258 COG0477 # Protein_GI_number: 11499839 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Archaeoglobus fulgidus # 7 533 6 493 503 197 29.0 5e-50 MNKAFQQPSRRDWFGLAVLSVGLGLIVLDGTIVGVALPTIIRDLGLNLTDAQWVNSLYAV VLAGLLLTTGNLADRWGRKRLFIAGTAVFVLGSLLAALSQTAGVLITSRAVQAVGAALIM PSTLSTVNAVFRGKSRAVAFGVWGAVISGAAAVGPLAGGALTQWVSWHWIFLVNLPIGLL AIVAAAFTVPETRGGKKLPGMDVDGALLSAIGCGALVFAIIEGPDLGWWTPRSDFSVLGW VWPVSAPVSIVPVALAVSIVAIILFVLWEKHRARVQRDALLDLGLFSYKTFSWGNLTAAM VAVGEFGIIFVLPLYLISALGMSVMGAGLVLAAMAVGAFMSGAAARHLARRFGAPGTVLI GLGLEVFGVVVLAFLVDPEIPGWVVALPLTVYGVGLGLASAQLTGTVLQDIPVDVSGQGS ATQSTVRQIGSALGTAVAGATLAVSLASTLPGSLASAGFTGAQVDRLAGATRVSAGTVLA QLRSQGPAGPLGEQTPALVDALTQGFASAVSWVLLAAALFLVLGLAGAWQVKRQSR >gi|294971151|gb|ADNU01000046.1| GENE 99 106704 - 108212 1359 502 aa, chain - ## HITS:1 COG:NMA1574 KEGG:ns NR:ns ## COG: NMA1574 COG0477 # Protein_GI_number: 15794467 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 1 501 1 512 513 383 46.0 1e-106 MSVLTRSGITAPTTYNRWLIPPAALAIHLCIGQVYAFSVFKMPLVEHFNTGEVAVGWIFS VAIAMLGISSAIGGTWVEKAGPRLSMLVSGAFWVIGFFVASIGIATGQLWLVYFGYGFLG GIGLGIGYIAPVSTLIKWFPDRPGLATGLAIMGFGGGALIASPMSNQLMVAFGGGDSAEN LVAGVFPTFIVLAVVYAVVIALGAYVVRVPHPDWKPQGWDPASVKSKSMQTTRHVTARKA ISTPQFWLLWVVLFTNVTAGIGILESASPMIQDYFSQITPASAAGYVGLLSLANMGGRFL WSSVSDITGRKFIYIVYLGVGVGLYLLVALIGHGSLILFILATLVILSFYGGGFATMPAY LKDIFGTMQVGAIHGRLLTAWSAAGVAGPLIVNTVLESRRSTGAEGPALYQLSLFIMVGV LAVGFIANALMRPVADKHYASDEEVEQIAASHNLKTGKDGGIAVNAGNALHTAAAWVLTA IVTVGLGYGLVQIVLKSLQLFV >gi|294971151|gb|ADNU01000046.1| GENE 100 108523 - 110514 2029 663 aa, chain - ## HITS:1 COG:no KEGG:Bcav_3875 NR:ns ## KEGG: Bcav_3875 # Name: not_defined # Def: hypothetical protein # Organism: B.cavernae # Pathway: not_defined # 43 303 47 305 426 175 41.0 7e-42 MKSSSSAPSRFSWRAGVAGSVAFALGGAGLLSAHPAQAAEVNVSDAVFSWGINAESGAGA YYPGSCNFLSAGVSGDAGKADVWSKEDAEAKKLFSPEEGNVKILRPTADGGTQPITWDNK CQTPEGERVNTYNGETAKRSGNFVEISGGKGTIDPETKSGTIEWEGSFTVVYYSGFTYWS VSNPKLEVKNGKGKITGTFSGYGADMADLSKWEKLKPVEGTIADFGNNKVELDENGFTVT PDYEGVDSGQPDQNKEKDGWGSFPKSWVDYNVQTGQAQYWYSSGGAADPRKKPTALTVKY KAEESESQVDEETIKNTTKSTHSVSDEGLAVNVTGKGYSVLPKASTGKDANGVYVAVVDR KVKNSEIELSRPSAKAASVAEKSSKEPVVVEYIPGSAIKDGKLNAKVTAGADKLNKDTDY DTVVWVAHGNPNDETVLHRSNINLTDEQKNTLFPAEDPKEQETQDPKDPETQDPQEPTEP EAPDTKEPETPETQKPNEPGTPENGNDEATEPGTKEPEAPDTPENGDDKPTDPETQDPKE PEVPDTKEPEVPEAQEPNEPGTPENGDGEPTEPGTKEPEVKEPEVIQPEAQGPDGQNPGA EAPGADRPGAAETSGSHGSSGKPSPTASKSLPRTGGTNLAVGIAGITLLAVGAVAMIISS RRA >gi|294971151|gb|ADNU01000046.1| GENE 101 110692 - 111963 993 423 aa, chain + ## HITS:1 COG:Cgl0385 KEGG:ns NR:ns ## COG: Cgl0385 COG4558 # Protein_GI_number: 19551635 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Corynebacterium glutamicum # 107 398 64 346 359 185 38.0 2e-46 MKTTSRSLCRDTEPDVKAWYNHTRWRVPRRTKRRVAVTATVLAVGLFLWNNGFHNIGTLN AAHSHECVPPPATPAAQLPDIPDVPTSKKLPVSKIHGPTTAYTRASEIRPIADFADQQQT LPVTVTSDDGPKQTVRDTSRILAVNQNGGLAAAVVGLGLGCNLIGRDVSTQLSSLMPGQK EIPLVTQNGHELSAEAILNLAPTVVLTDSTIGPYDVQLQLRNAGIPVVFIPSATEDGVQG VSPQIVAVAKALGLQDAGEQLAKRVDEEVAETQKRIQALAPDNPADRPRTVFLYLRGDIY YWFGKGSGADSLIQAIGARDVATEVGFSGMSPTNAEALVKAAPDVILVMTKGLESVGGID EALKLPGIAQTPAGKHRRIVDMSDYEVMSFGPRTAEVIAALGTAVHAPEYAYVPQEESAK ADA >gi|294971151|gb|ADNU01000046.1| GENE 102 112176 - 113177 954 333 aa, chain + ## HITS:1 COG:Cgl0386 KEGG:ns NR:ns ## COG: Cgl0386 COG0609 # Protein_GI_number: 19551636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 1 329 34 356 358 278 49.0 1e-74 MAVLLLGGTLLSAMLGQLYISPKEIVGSVLQSVGINWLPGPSHEFGAEALWEVRFPRIVL TVFVGAALAIAGAVMQGIFGNPLAEPGTIGVSSGAAVGASFAFLHGLSFLGGFTVPLLAF ACGLATTIVVYVLARSNGRTEVVTLILTGVAVNAISGALISFIVFKAPTQAREQIVFWQM GSFNGSRWEQVAIVVPLVVVGIVLTMFLARGLDLVSLGEKAARHLGVDVERLRLYAMILS ALLVSAAVAFVGIIAFVGLVVPHLMRMLLGPSHRLLLPASALGGAALLTFADLAARTLIE FADLPIGMLTALIGGPYFFYLLRRSRREAGGWA >gi|294971151|gb|ADNU01000046.1| GENE 103 113174 - 114025 793 283 aa, chain + ## HITS:1 COG:Cgl0387 KEGG:ns NR:ns ## COG: Cgl0387 COG4559 # Protein_GI_number: 19551637 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, ATPase component # Organism: Corynebacterium glutamicum # 23 261 3 240 271 199 51.0 4e-51 MIEKLRRARESRPPEVPTPGSTVLSVDQVTVSYDGERKVLEGASLDVRAGEVLALVGPNG AGKSTLLGVITGDVEEASGAVTINDHPSYAWNTRELAMRRAVLLQQVDVSFPFTVLEVVE MGRAPWQRTQATADDDRIVSAVLERTDTSRFASRTFTSLSGGERSRAALGRVLAQAAPIL LLDEPTAAMDIRHQELVLTIAREYAATGSAVVVVLHSLDLAGAYADRIALLNNGRIAADG TPEEVLTAERISEAYGHPVTVFTDPVSGSPLVVPVRPPRKDMS >gi|294971151|gb|ADNU01000046.1| GENE 104 114022 - 115386 1026 454 aa, chain + ## HITS:1 COG:no KEGG:Amir_2876 NR:ns ## KEGG: Amir_2876 # Name: not_defined # Def: hypothetical protein # Organism: A.mirum # Pathway: not_defined # 21 301 10 280 365 161 44.0 6e-38 MNQPGHAAGSRKKRLGLRWFVATVAAVLIGGMGAFAGATVSPEPAEAAARVSVSGTPSVD GTSTLKLSGSGFQSVQNGFGGIYVLFGVAEGTWQPSKGGKTGTNLRYAYDDESNPVGYQL FVTFPGSSTAHAANGGTLNADGTWSGEIILPGARFTSYDRDRNPVDVDCTRERCGIITIG AHGVSNAKNETFTPIEFPAAAAAGQSGGEQAQNNGATGEAAAPNDNASKDDKDQKNADGP AAPAPGAAGGQQPASGPLLEPDQVDAINTNANRMLFLLMIGVVLAICAIALAVGVGSYMA VKSLLLGVSPEALERVRTRRAKRAIGAEHKRERKLQKFREKEEARTRKYERTVDTKIARA DMHDSGMRHPVISKQYSYTQQPSTHNQTSRGPMRFFELIEDKESSSGDQPRQPVARGKHM HSQGATAGADSGNAPTLVMERIVDGRAESQEETR >gi|294971151|gb|ADNU01000046.1| GENE 105 115383 - 117569 1499 728 aa, chain + ## HITS:1 COG:no KEGG:Bcav_3875 NR:ns ## KEGG: Bcav_3875 # Name: not_defined # Def: hypothetical protein # Organism: B.cavernae # Pathway: not_defined # 346 608 38 303 426 176 43.0 3e-42 MKRSIVTWVAAGTIFLILVFATGLLIGTAALASPNSESGTSEADSSKLKVSDAGLTWGIN AESGAGAYLPGSCNFLSAGVAADNGGSSLWPNDAEKRGLFKAQDGNVKILRPTADGGTQP ITWDNKCQTPDGKRVNTAGVSSGNYVQFSGGTGEVDTATNTGNIQWEGSFTVVYYSGYTY WSVSNPKLEVKNGKGKLTGTFSGYGADMADLSKWEKLKPVEGTIADFKNNTVKLDENGFT VTPDYEGVDSGQPDQNKEKDGWGSFPKSWVDFNVLTGQTQYWYTSGGAADARKSPSPLSV SFTGTPVMPEQPSATPQPPAPSPKPDTGDDNTEKPDGTSTEEKNPPETPTGSDATLFWAI NKETSAGGFAPGTCNFLSAGVSPDNGGAVVWDAPGKLYKPTDGNVKIEKPDASGEFHTAT WQNKCDDRYGGRVVAADKDSHHESRLNIAGGSINIDDGEITASWDGGFTIVFYSGMTYWS VSDPKLTVTKDGRGELTGTASGYGADMEDLSKWEKLKSETITLATFSGLDVNKAVKDGGF TVTPDYLGVDYRAGDGNTPQDRTEAEWGSFPKSWVDFNVKTGQSSYWYSSGGIADARKPA LPLTIAFDNSFQVPATEPAKPGESVAGAGGPGSTVTGGNTVGEPGVGVPGAVGPGGGPQS SSAQPADVEDTTAFAATAYEARRSEGMGTINAKTWWLGGATAATGIAATVGIGWLLRRNI GLDPSTWT >gi|294971151|gb|ADNU01000046.1| GENE 106 117627 - 118283 534 218 aa, chain + ## HITS:1 COG:Cgl2178 KEGG:ns NR:ns ## COG: Cgl2178 COG5398 # Protein_GI_number: 19553428 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Corynebacterium glutamicum # 3 212 1 215 215 127 40.0 2e-29 MTITTPAAETLSFSQRLRKETQREHSEAESEKFIVDLMAGRLDRHAYIALLEQYAVLYPA LETAVQAAPSDSTVAFFDHPGLARTQAINNDLDYLLGEDRQPPVALEATRFLAEHFQSEV SPEQLLAHHYLRYLGDLSGGLAIGKLVKRHYSIEDEALNMWRFPGINKPKLFKDDYRAKL DAVTLTREQQEAVIAEAELGFRLNKAIFRQLGETLHVE >gi|294971151|gb|ADNU01000046.1| GENE 107 118490 - 118879 401 129 aa, chain - ## HITS:1 COG:MT0784 KEGG:ns NR:ns ## COG: MT0784 COG0537 # Protein_GI_number: 15840174 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Mycobacterium tuberculosis CDC1551 # 3 129 2 129 133 137 49.0 6e-33 MATLFTKIIDGEIPATFVYEDDHCVAFMDIQPLTDGHLLVVPREEVDHWLDLDDDLVSHL FTVAKKLGNAQKKAFGCERVGLIVQGFEVPHVHIHVFPTNQISDFDLANKHDTTAEAREE AASKIKEAL >gi|294971151|gb|ADNU01000046.1| GENE 108 118951 - 119442 292 163 aa, chain - ## HITS:1 COG:MT2298 KEGG:ns NR:ns ## COG: MT2298 COG1225 # Protein_GI_number: 15841731 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Mycobacterium tuberculosis CDC1551 # 38 161 30 148 153 90 38.0 8e-19 MASTDAHPGWTRECPTHLGPVVSLSTVGEVLAPEVDQRGLLAVFVPFAFTPTCHAEVGEL SASRAVLEEAGIVCTVVSCDSKFTQAAWVETAGSAWPLMSDFWPHGALSRDFGVFDEQSG MAVRGTFALNMNGQVVDSQVLQPGQKRDFTERGLARWIDALTT >gi|294971151|gb|ADNU01000046.1| GENE 109 119442 - 119870 546 142 aa, chain - ## HITS:1 COG:no KEGG:KRH_10820 NR:ns ## KEGG: KRH_10820 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 18 141 15 138 138 138 58.0 8e-32 MSNTPSGRTLDCTRTNPLGLEKGTYIQEIGYDDDVDFALREAIEKVTGEEMADEDVDDVF DAIVMWWRSDDPDLTDAIVDAQTTLAEGGVVWLLTPKAGREGHIAPVDINAAAPTAGMHV TKTVSVCDDWSAVRLVGKKSYG >gi|294971151|gb|ADNU01000046.1| GENE 110 119794 - 120006 120 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYVPFSNPRGLVRVQSSVLPDGVLLITPILPVSSLLGKPKVHFETSGPCILPVSCPVTVL VTPHWTVLSV >gi|294971151|gb|ADNU01000046.1| GENE 111 120116 - 122875 3005 919 aa, chain + ## HITS:1 COG:MT2301 KEGG:ns NR:ns ## COG: MT2301 COG2609 # Protein_GI_number: 15841734 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Mycobacterium tuberculosis CDC1551 # 13 910 1 890 901 1244 66.0 0 MDSKRHGPILNGLPSQVPDTDPQETQEWIESLDALIDEAGQSRARYVMLSLLNRARQKRI GVPSLTATDFINTIGPEDEPWFPGDEEVERRYRRWLRWNAAVMVHRAQRPGIEVGGHIST YASAATLYEVGLNHFFRGKDHPGGGDHVFYQGHASPGMYARAFLEGRLSADQLDGFRQMK SHYIDGKQFGLPSYPHPRHMQDFWEFPTVSMGLGPMNAITQAMFDKYLLNRGIKDTSQQR VFAFLGDGELDEPESRGMLQYAAFEELDNLNFIVNCNLQRLDGPVRGNGKIIQELEAFFR GAGWNVIKVIWGREWDALLAKDRDGALVNLMNATPDGDYQTYKGESGGFVRDNFFGRDPR TKAMVADMTDEEIWNLKRGGHDYRKVYAAYKAAVEHTGQPTAILVMTVKGYSLGPTFEAR NATHQMKKMTVEDLKLARDHFSIPISDEELEKNPKLPPYYHPGEDAPEIQYMLERRRELG GFSPERRSKYTQISLPDDKAYAMAKKGSGTQAIASTMGFVRILKDIMRDKEFGKRVVPII PDEARTFGMDSFFPTAKIYNPHGQNYVSVDRDLFLAYKEATDGQILHMGINEDGSVAAFN AVGTSYATHGEPMIPFYIFYSMFGFQRSGDGFWAAGDQLARGFILGATAGRTTLTAEGLQ HGDGHSHVLSSTYPSIVSYDPAYVYEIGHILRDGLKRMYDPEDERQDPDVSYYITMYNEP MIQPAEPEDLDVEGLLKGIYKLSDGPELDGPKVQLLASGVAVPWIVKAQEMLAEEWNVSA DVWSVTSWQELRRDGLACDDERLLDPSAERRLPFVTQKLADAPGPVIATSDYTRTVPDMI RQYVPGHFTSLGADDYAISDTRAAARRHFLIDAESVVVQALISLADLGEIDASVAAEASR KYKLDDPRAGSTGEAGGDA >gi|294971151|gb|ADNU01000046.1| GENE 112 123010 - 124203 867 397 aa, chain + ## HITS:1 COG:ML1652 KEGG:ns NR:ns ## COG: ML1652 COG2508 # Protein_GI_number: 15827870 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Mycobacterium leprae # 20 393 24 408 414 215 37.0 1e-55 MLSTQPKSGKLNADQSRRDDTIVRLLKGKDALTRLTAGRIEAQLPWFRRLSPSERKWVVH LAHAGITSFIEWYRNPDAPVGIVSEIFHNAPRELMRTISLQQTLQLLRVVVEVVEEHVAQ LGNSSDVDSLREGVLVFSREIAFAAADVYARAAEARGSWDVRLEAMVIDALMRGDSVDEL ASRTAAYGWRSKAAVHVIIGRASTRTFKGGLSEVRSAAQRAGEDALVGIHDNRLLIVLGG ATDIDRAVGQLLQYFGPQEVVIGPQVASLAEAGASAAAASWALRTAYARPNSPRPVFASD LLPERAMAGDQTALNELVRRFYEPLSLGSGQLLTTAENYVDFGGSLEATAKALEVHPNTV RYRLRKIQELIGLDATQARAGFVLRIALVFGRLTEGM >gi|294971151|gb|ADNU01000046.1| GENE 113 124305 - 125219 746 304 aa, chain + ## HITS:1 COG:ML1653 KEGG:ns NR:ns ## COG: ML1653 COG0331 # Protein_GI_number: 15827871 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Mycobacterium leprae # 1 294 1 299 304 226 48.0 5e-59 MLVIACPGQGAQKPGFLNSFLESPSFRETIEAAGQACGIDLVSHGTQSDEETIKDTAVAQ PLLVASAIATFNELFTDDSLPQFVAGHSVGEIGAAAIAGVLSAEDAMKFVHVRAQGMADA SNAQPTGMAAVVGGVAEDVISAIEAAGLAPANVNGGGQIVAAGSLEAIEKFAANPPERAR VIPLKVAGAFHTEYMKSAQAPLAEMAAGLEVHDPRISILSNRDGRAVESGREYVDALVSQ VTNPVRWDLCQATLVEAGVTGLIELAPGGTLTGLAKRAMKGVETLAIKSAEDLESAREFV RTHA >gi|294971151|gb|ADNU01000046.1| GENE 114 125240 - 126241 926 333 aa, chain + ## HITS:1 COG:MT0557 KEGG:ns NR:ns ## COG: MT0557 COG0332 # Protein_GI_number: 15839929 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Mycobacterium tuberculosis CDC1551 # 1 333 1 333 335 261 45.0 1e-69 MVTLKTPQPQRFARISGLGGYRSERTVTNEEIVGPINSSDEWIQQRTGIKTRHYASEDVS VVDMAEQAAIEAIANAGLKPADIGAIVVSTVTFTVATPSAAAELTRRLGTGPVPAWDISA ACAGYCYGIAQADAFVRAGTADNVLVIGAEKLSDIIDPTDRSISFILGDGAGAVVVSASD TPGISESVWGSKGENWDTIRMTSSFLDMKKDPSTPWPTLRQDGPSVFRWAVWDMAEVAQE ALDRAGITAADLGAFVPHQANMRIIDELAKQLKLPEHVKIGRDIADNGNTSSASIPLATE RLLRENPELSGKLALQIGFGAGLVFGAQVIVLP >gi|294971151|gb|ADNU01000046.1| GENE 115 126405 - 126656 466 83 aa, chain + ## HITS:1 COG:ML1654 KEGG:ns NR:ns ## COG: ML1654 COG0236 # Protein_GI_number: 15827872 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Mycobacterium leprae # 20 79 20 79 115 58 56.0 3e-09 MANSEQEVLAGLAEIINEETGLAPDAVEPSKSFTDDLDIDSISMMTIVVNAEKKFGVKIP DDDVKELVTVQNAVDYIVKAQQA >gi|294971151|gb|ADNU01000046.1| GENE 116 126725 - 127966 1180 413 aa, chain + ## HITS:1 COG:BH2882 KEGG:ns NR:ns ## COG: BH2882 COG0304 # Protein_GI_number: 15615445 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Bacillus halodurans # 1 411 1 408 411 323 46.0 5e-88 MTNSVVVTGIGAVTPLGATAQETWDAALSGTSGAKTLDNDWAEKYGIPVNFAATVNSDVV PEKLSRVEAKRLDPASQLALIAAREAWADAQSPEVDPERLAVSWATGIGGVWTLLNAWDT LREEGSRRVMPLTVPMLMPNGPAAALGMEFKARAGVQTLVSACASSTESLGHAVDLIRDG RADVIIAGGAESAVHPITLSAFSSMRALSKRNDSPETASRPYDVNRDGFVMGEGSGALVL ESRESAEARGARIYAEVAGWGLSNDAYHITAGEPEGAGSIRAMRTALETAGATAAEVKHI NAHATSTPVGDVPESVAINKLLGEHTSDALVSATKSMTGHLLGGAGAVESIFTALAVHHR MAPPTINIEEVDPEINLNIVRDTPGELPKDDFVALSNSFGFGGHNAVVAFKTV >gi|294971151|gb|ADNU01000046.1| GENE 117 128176 - 128790 336 204 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295395994|ref|ZP_06806179.1| ## NR: gi|295395994|ref|ZP_06806179.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 204 1 204 204 376 100.0 1e-103 MTVNVHRRLIAVCAVGALVLTGCSQELPQTEAAPQPGEHEQSPTPTSEPIPKFEVPEYTT DLDLTAEEMLAAEEALIGLQRYIFVSEQVMKSGGEDTLNIDNVSVGRAKDGLNKTASNFR KEKKKFLGHIVSDGFHIHEMQVTKESKNEFSISACLPADNWGVREASDKSSDEKLRDEAR MIWTLEKESSTWKVAVQELYSEDC >gi|294971151|gb|ADNU01000046.1| GENE 118 128792 - 129619 459 275 aa, chain + ## HITS:1 COG:no KEGG:Celf_2536 NR:ns ## KEGG: Celf_2536 # Name: not_defined # Def: hypothetical protein # Organism: C.fimi # Pathway: not_defined # 100 273 132 304 304 81 31.0 4e-14 MRLALSFGTSLLIVGLTLFSAPVAQSTPGDCVWDQGDGARCSSTRTNSGNNSGSNNSKSD SNKRSGKRSGNGKNGSSGKGNGDFCPQSLPGAICGRIDLPATSGPADAPPPPPPPSPTFM ETQFKKYSIPPSVINSLPGDSWGIAHRKTAFWADSSIQYINDTILGYPITVKAIPRKYHW NFGDGNTLHTQHPGNKPTDINKARIYNVYTAPGNVTVKLATTYSGMYKIGDSPWITIPGT TDIQSSNADLRIYRFHKYLVNKSCKEDPTGPDCTP >gi|294971151|gb|ADNU01000046.1| GENE 119 129643 - 130551 638 302 aa, chain - ## HITS:1 COG:XF1532 KEGG:ns NR:ns ## COG: XF1532 COG0583 # Protein_GI_number: 15838133 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 278 15 292 325 234 47.0 1e-61 MNLRDFEYLIALDEFRHFGQAAQSCEVSQPTLSTQLKKLEDELGTPLIERSGRNMQLTRV GQEVVARARKVVEQVAEMRSIARHASDPRSGEIRVGCFPTLNPYLLPHAMPALKKSLPSL SVLVVEEKTQTLEDMLDRGELDAIIVGTPVVRSGIDVLPLFREDFLFAGPAHDPEMSSDD KLLVSDLEGEELLLLSEGHCLRDQALQVCKTSKASEQVNYRATSLETLRHMVVSGAGHTL MPKLAVTPPVTPNPGLVLKEFADPAPHRDVMLAWRSGSVYREVFPQLAEVLRNSVADIVT LL >gi|294971151|gb|ADNU01000046.1| GENE 120 130624 - 132198 435 524 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 214 516 2 303 306 172 32 1e-41 MLDANLKNQLKTILTEKVTKDVVLASSLDDSKKSAEMAELLDQIAELSDRVTHERRDDYD ERRPSFAIERPGADISIRFAGLPLGHEFSSLVLALAQVGGNPVKESEETIAAVKGLDKDL KFVTYMSLTCQNCPTVVQALNTMAVLNPRIEHVAVEGSTFQDEVSEKNIQAVPTIFLNGK EWGSGRMDIADFVDRLDDSASERLAESVKDKDPFDVLVVGGGSAAVAASIYAARKGLRTG MVADRVGGQILDTVGIENFISYPYTEGPKLAAQFVEHMDQYDIDVIRPIKAEKLVPAETE GDLHTVVLTGGSELKSKTVVVATGARWRELGVPGDHEYRNKGVTFCPHCDGPFFKGKNIA VVGGGNSGIEAAIDLAGIVGHVTVMEFMDDLKADEVLQRKLKSMDNVDIILSAASKEVLG DGKNVTGLKYEDRNTGELHELDVNGIFVQIGLLPNTEWVKGAVDMNGRGEVEVQANGATS VPGIFAAGDATTAPYKQIVTSLGAGATAALAAFDYLIRQSAPQE >gi|294971151|gb|ADNU01000046.1| GENE 121 132256 - 132819 781 187 aa, chain - ## HITS:1 COG:ECs0644 KEGG:ns NR:ns ## COG: ECs0644 COG0450 # Protein_GI_number: 15829898 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 312 73.0 2e-85 MSVLNTQILPFEATAFRNGEFVELSEKDLEGKWSIFFFYPADFTFVCPTELGDMADNYDE FQKLGVDIYSVSTDTHFVHKAWHESSETIGKIQYAMIGDPSGQITRNFDNMREGQGLADR GTFLIDPDGIIQYLEITPEGVGRNASELLRKVKAAQYVRNHPGEVCPAKWEEEQETLVPG IDLVGKI Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:49:48 2011 Seq name: gi|294971087|gb|ADNU01000047.1| Brevibacterium mcbrellneri ATCC 49030 contig00051, whole genome shotgun sequence Length of sequence - 63391 bp Number of predicted genes - 65, with homology - 60 Number of transcription units - 28, operones - 12 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 - CDS 2 - 1670 1469 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 2 1 Op 2 . - CDS 1779 - 2345 429 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 3 1 Op 3 . - CDS 2371 - 3261 595 ## Celf_2677 hypothetical protein 4 1 Op 4 . - CDS 3265 - 4257 930 ## COG0039 Malate/lactate dehydrogenases 5 1 Op 5 . - CDS 4310 - 6766 1466 ## COG1643 HrpA-like helicases 6 1 Op 6 . - CDS 6766 - 8073 1004 ## COG2066 Glutaminase - Prom 8153 - 8212 2.6 7 2 Op 1 2/0.400 + CDS 8093 - 8902 793 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 8 2 Op 2 . + CDS 8972 - 10444 1719 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 9 2 Op 3 . + CDS 10529 - 11797 1120 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Term 11582 - 11614 -1.0 10 3 Tu 1 . - CDS 11825 - 12085 310 ## gi|295396009|ref|ZP_06806193.1| hypothetical protein HMPREF0183_1691 + TRNA 12238 - 12309 54.7 # Gln CTG 0 0 + TRNA 12326 - 12398 56.0 # Glu CTC 0 0 - Term 12401 - 12462 18.3 11 4 Tu 1 . - CDS 12485 - 13153 566 ## KRH_05300 hypothetical protein - Prom 13180 - 13239 1.8 12 5 Tu 1 . + CDS 13568 - 14479 318 ## COG2267 Lysophospholipase 13 6 Op 1 . + CDS 14790 - 15104 134 ## gi|295396012|ref|ZP_06806196.1| conserved hypothetical protein 14 6 Op 2 . + CDS 15114 - 15248 65 ## 15 7 Tu 1 . - CDS 15313 - 16491 936 ## gi|295396013|ref|ZP_06806197.1| conserved hypothetical protein 16 8 Tu 1 . - CDS 16632 - 16751 87 ## - Term 16803 - 16840 -0.6 17 9 Tu 1 . - CDS 16924 - 17643 530 ## COG1414 Transcriptional regulator 18 10 Op 1 30/0.000 + CDS 17784 - 19187 1306 ## COG0065 3-isopropylmalate dehydratase large subunit 19 10 Op 2 . + CDS 19220 - 19819 610 ## COG0066 3-isopropylmalate dehydratase small subunit 20 10 Op 3 1/0.400 + CDS 19888 - 21207 945 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 21 10 Op 4 . + CDS 21204 - 21938 619 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 22 10 Op 5 . + CDS 21935 - 22939 967 ## COG0240 Glycerol-3-phosphate dehydrogenase 23 10 Op 6 . + CDS 22971 - 23519 609 ## COG1881 Phospholipid-binding protein 24 10 Op 7 . + CDS 23522 - 24631 884 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 25 11 Tu 1 . - CDS 24653 - 25162 308 ## Achl_2250 secreted protein 26 12 Op 1 . + CDS 25188 - 26168 834 ## COG0611 Thiamine monophosphate kinase 27 12 Op 2 4/0.000 + CDS 26165 - 27664 1025 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 28 12 Op 3 1/0.400 + CDS 27667 - 29880 1703 ## COG1200 RecG-like helicase 29 12 Op 4 14/0.000 + CDS 29881 - 30426 245 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 30 12 Op 5 . + CDS 30430 - 30924 291 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 31 12 Op 6 . + CDS 31008 - 31517 328 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 32 12 Op 7 . + CDS 31520 - 31723 295 ## PROTEIN SUPPORTED gi|148272537|ref|YP_001222098.1| 50S ribosomal protein L32 33 12 Op 8 4/0.000 + CDS 31734 - 32426 651 ## COG0571 dsRNA-specific ribonuclease 34 12 Op 9 . + CDS 32457 - 33446 640 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 33568 - 33599 -0.9 35 13 Tu 1 . - CDS 33373 - 34605 754 ## gi|295396033|ref|ZP_06806217.1| hypothetical protein HMPREF0183_1715 - Prom 34629 - 34688 3.4 36 14 Op 1 . + CDS 34731 - 35492 492 ## COG3863 Uncharacterized distant relative of cell wall-associated hydrolases + Term 35505 - 35547 7.4 37 14 Op 2 . + CDS 35567 - 36754 440 ## AARI_08070 hypothetical protein 38 14 Op 3 . + CDS 36772 - 37959 508 ## AARI_08070 hypothetical protein 39 14 Op 4 . + CDS 37977 - 39197 515 ## AARI_08070 hypothetical protein 40 14 Op 5 . + CDS 39194 - 39835 425 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 39690 - 39731 1.9 41 15 Tu 1 . - CDS 39890 - 41470 1262 ## COG0471 Di- and tricarboxylate transporters 42 16 Tu 1 . + CDS 41759 - 45271 3395 ## COG1196 Chromosome segregation ATPases + Prom 45353 - 45412 2.3 43 17 Tu 1 . + CDS 45467 - 45847 236 ## gi|295396041|ref|ZP_06806225.1| conserved hypothetical protein + Prom 45868 - 45927 1.6 44 18 Op 1 1/0.400 + CDS 45949 - 47076 664 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 45 18 Op 2 . + CDS 47158 - 48816 1833 ## COG0541 Signal recognition particle GTPase + Term 48827 - 48854 -0.8 46 19 Tu 1 . - CDS 48813 - 48989 80 ## gi|295396044|ref|ZP_06806228.1| conserved hypothetical protein + Prom 48832 - 48891 2.3 47 20 Op 1 19/0.000 + CDS 49017 - 49460 503 ## PROTEIN SUPPORTED gi|62422971|ref|ZP_00378146.1| COG0228: Ribosomal protein S16 48 20 Op 2 . + CDS 49463 - 49696 182 ## COG1837 Predicted RNA-binding protein (contains KH domain) + Term 49697 - 49742 13.0 - Term 49853 - 49887 2.4 49 21 Tu 1 . - CDS 49933 - 50250 157 ## - Prom 50352 - 50411 1.9 - Term 50521 - 50559 2.3 50 22 Tu 1 . - CDS 50598 - 52010 706 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 52058 - 52117 5.3 + Prom 52008 - 52067 6.9 51 23 Op 1 . + CDS 52089 - 53405 844 ## COG0477 Permeases of the major facilitator superfamily 52 23 Op 2 . + CDS 53412 - 53522 57 ## + Term 53575 - 53617 -0.6 + Prom 53972 - 54031 2.8 53 24 Tu 1 . + CDS 54134 - 54454 131 ## COG0640 Predicted transcriptional regulators 54 25 Op 1 . - CDS 54528 - 54788 216 ## 55 25 Op 2 . - CDS 54685 - 55098 294 ## gi|295396051|ref|ZP_06806235.1| OmpA/MotB family protein + Prom 55381 - 55440 3.7 56 26 Op 1 30/0.000 + CDS 55519 - 56016 190 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 57 26 Op 2 33/0.000 + CDS 56018 - 56833 699 ## COG0336 tRNA-(guanine-N1)-methyltransferase 58 26 Op 3 5/0.000 + CDS 57021 - 57362 466 ## PROTEIN SUPPORTED gi|227995322|ref|ZP_04042372.1| LSU ribosomal protein L19P 59 26 Op 4 2/0.400 + CDS 57374 - 58066 497 ## COG0681 Signal peptidase I 60 26 Op 5 4/0.000 + CDS 58078 - 58800 612 ## COG0681 Signal peptidase I 61 26 Op 6 . + CDS 58797 - 59492 314 ## COG0164 Ribonuclease HII 62 26 Op 7 . + CDS 59537 - 59851 308 ## RSal33209_1089 hypothetical protein + Prom 59917 - 59976 2.3 63 27 Tu 1 . + CDS 59997 - 61268 1513 ## COG1301 Na+/H+-dicarboxylate symporters 64 28 Op 1 2/0.400 + CDS 61416 - 61769 248 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 65 28 Op 2 . + CDS 61766 - 63295 659 ## COG0606 Predicted ATPase with chaperone activity + Term 63339 - 63372 -0.3 Predicted protein(s) >gi|294971087|gb|ADNU01000047.1| GENE 1 2 - 1670 1469 556 aa, chain - ## HITS:1 COG:aq_1039 KEGG:ns NR:ns ## COG: aq_1039 COG0243 # Protein_GI_number: 15606330 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Aquifex aeolicus # 2 553 237 786 1015 443 43.0 1e-124 MAEAHPVGFQWVTEAKKRGARVIHIDPRFSRTSALADKYVPIRAGSDIVFLGALIRWVIE NDAYFAEYVQAYTNAATIINEDYRDTEDLDGLFSGFDKDSKTYDQTSWAYEIDPETGRPA TDPTYEHPRTVFQILKRHYSRYTPELVEQMCGIKREDFEYVARSITQNSGRERTTCFAYA VGWTQHSMGTQFIRTAAILQLLLGNMGRPGGGIMALRGHATIQGASDIPTLFHLLPGYLP MPKAGTHDTLDQYLGAVGDKKKKGFWANGDAYAVSLLKSWWGDKATPENDFAYDYLPRIN GPHGTYQSCMLMLEDKVDGYFLLGQNPAVGSANGRMQRMAMSHLKWLVVRDFNMIESATW WKEGPEIDTGELRTEDIGTEIFFMPAANHTEKAGTFTQTQRLVQWRHQAITPPGDATSDL EFLYDLGNRIRAKLADSTDPRDRPLLDLTWDYPVDEHGEPDASAVLAEINGFHLDGPNKG EPLANFNEMRADGTTSGGCWIYTGVFADGINHAANRKPGQEQDTAAREWGWAWPANRRML YNRASADPQGKPWSER >gi|294971087|gb|ADNU01000047.1| GENE 2 1779 - 2345 429 188 aa, chain - ## HITS:1 COG:aq_1039 KEGG:ns NR:ns ## COG: aq_1039 COG0243 # Protein_GI_number: 15606330 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Aquifex aeolicus # 40 188 43 198 1015 116 40.0 2e-26 MGRFSFLQWPVVRQLTTGDAFGRGPSVTSTKTQNTEPRTVTADKVVQSVCPYCAVGCGQR IFVKDNKVVQIEGDPDSPISRGRLCPKGAASEQLVNAPGRVTDVLYRAPHSTDWEKISLD TAMDMIAERFIEARRAHWQDTDEHGRPLNRTMGIASLGGATIDNEENYLAKKLFTAAGAV QMENQARI >gi|294971087|gb|ADNU01000047.1| GENE 3 2371 - 3261 595 296 aa, chain - ## HITS:1 COG:no KEGG:Celf_2677 NR:ns ## KEGG: Celf_2677 # Name: not_defined # Def: hypothetical protein # Organism: C.fimi # Pathway: not_defined # 24 285 29 286 294 286 59.0 6e-76 MHVLSPREWRELRDAHEQAVHERTASHLERRSRGEKHPVEDFLFTYYPFKPGKLATWHPG AGTAVMVETSADEAYFNRRWYTRSQHAGHTVAHVDVGAWEADRGQGATFIRQLLEATVDR EASFGCFGLHEWAMVYKQTTQEHRHSHVPLRLSQEETDRVVENHRIQCSHYDAFRFFTPP ARPLNTLQPTRQGMRANEQPGCLHAGMDLYKWAMKLEPIVESATVLDAFDLARAIRTLDM EASPYDVRAWGYGVVAIETAQGKAEYMRRQEEFSRQAQALRRRLITQIDQAQNLIQ >gi|294971087|gb|ADNU01000047.1| GENE 4 3265 - 4257 930 330 aa, chain - ## HITS:1 COG:DR0325 KEGG:ns NR:ns ## COG: DR0325 COG0039 # Protein_GI_number: 15805354 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Deinococcus radiodurans # 4 320 9 320 330 296 50.0 5e-80 MKIVAVSGAAGNIGYNVLGRLADGYVYGDEPIELRLLEVPQAVQALDGVIMELVDHASPR IANIVATDDPEVAFDGAHAALLIGSAPRKDGMTRGDLLEVNAGIFSTQGRVLGQVAHPDC KVVVTGNPANTNALVAAHHAEKEGFNPANITALTRLDHNRLIGQVAQRARVSAGDIAQVA VWGNHSNTQFPDLTFATVGGTPALDVIDRDTWLDTIVPTVATRGGAVIQARGGSSVVSAA SATLDHLRDWEQGTDGRWVSMAVPTQALPEEARYGVPAGVVYSYPVTIENGTYTVVPQLE LDDLQRERITASANELLDERSTAAGKGHLD >gi|294971087|gb|ADNU01000047.1| GENE 5 4310 - 6766 1466 818 aa, chain - ## HITS:1 COG:Cgl0142 KEGG:ns NR:ns ## COG: Cgl0142 COG1643 # Protein_GI_number: 19551392 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Corynebacterium glutamicum # 76 812 19 713 717 466 41.0 1e-131 MFDLGRISANLPAASLVAQIADQRPRVAVIQAPPGSGKTTVVPPAVANLGSGRVVVTQPR RIAAQAAAARLRELSGVPVGYTVRGDRDVPADAKVEFVTTGVLIRRLLRDPELAGVSAVI LDEVHERSIDSDLACAFVAQVAAMRDDLRVYAMSATLESDMWMGLLTQATSEEATLLSAH VPTFECETVWEPGLRPLTERGVDWGFLDHVASVAACEAQHRSERGGDVLVFVPGAREIER VAASVRRDFPTEELSGRLSVAAQQQIVRGHVPGSTRVIVATNIAESAITVPGVRSVVDAG LDRQARFDSVRGMSGLVTVGASKAAMVQRAGRAHREAPGRVIRCMSQADFASRPAHTPPE ITTSDLTSTVLDLAVWGTPLGVGLDMPTELPPRATERAVQALTALGALDQDGEATPVGHR LASVPADPHVARALFDGVEKVGPQAVRVACALATDERARDVPELVSKLSGTATFEREVAR LSRIAGVDAPQGSVPRSVVGLVTALARPEWIARRRGDTYLTASGTGVRADGFDDWIAIAS MARAGSKARAQLAVSIDEATALEAAGALHRTVERAEFTDGKVRARKVEELGAIELASTPV QPSAQAVVDAARAACETRGLHAVVPGISEQPGEGDPAFEALRARLGYVRAVVGDPWPNVT LDALQDLTWLEPDLEALGRGHKIDLVAALQRVLPWPEAARLNELVPERLEVPSGAKIRVT YPTPESHGDQPEAPVLAVKLQECFGLADTPSILGRPVLMHLLSPARRPLAVTDDLRSFWN GAYAHVRAENRGKYSKHPWPEDPWNAVPTARTNRSAPR >gi|294971087|gb|ADNU01000047.1| GENE 6 6766 - 8073 1004 435 aa, chain - ## HITS:1 COG:Cgl2430 KEGG:ns NR:ns ## COG: Cgl2430 COG2066 # Protein_GI_number: 19553680 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Corynebacterium glutamicum # 12 410 5 401 413 322 43.0 8e-88 METLASNPAYSPVTEYLQSIHETGLRKTGGALADYIPELANQDPTLFGLSLCTPEGIVYS VGDSDTQFSIQSVSKPFVYAMALADRGLERVNQSVGEEPSGDPFNSISLDEETGRPDNPM INIGAVTTHALVHSKGASREVRENRILAGMSAFAGRELSYDDAVYESEIDKAWRNLALAA LVRANDLIISDPAEVVRGYTRQCSALVTTKDLAVMGMTLASGGVNPQTGERVVPEWVAQQ VLSVMTTCGMYDAAGDWLTNVGIPAKSGVSGGIMGSLPGQMGAAAFSPPIDKFGNSVRGV DAFERMSEDLGLHMMKPPSPILSSVLEKETDSSGRLHIHIQGSMDFSLAEKALRSILETP QNSQPIVIDFRSVPSVSLVGYKLLHAGIFELKRRGHTVTILDPNEHFADLREEVYTSLSD IEPTEEPVDSSWFAK >gi|294971087|gb|ADNU01000047.1| GENE 7 8093 - 8902 793 269 aa, chain + ## HITS:1 COG:MT3071 KEGG:ns NR:ns ## COG: MT3071 COG0179 # Protein_GI_number: 15842549 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 40 267 6 234 239 219 49.0 4e-57 MRIVRFVHNDAPHYGVVEGNLPEVSDDGTLDTSELEVAVLSSDPFFSPAQSTGERLPYDE VRMLAPILPRSKVIGVGRNFADHARELGNDVPVSPLTFFKPNTSVVGPGEPIRLPAISEE VSYEAELAVVISKIAKNVTPENAYSYVLGYTAANDVTLRDIQRIDKQWSRAKGFDSSCPL GPWIETEYDPENVRIRSWVDGELKQDGNTEDFIFDIPTVIAHLTEVMTLLPGDVILTGTP AGVGRIEAGNRVDIAIDGLGILSNPVMDV >gi|294971087|gb|ADNU01000047.1| GENE 8 8972 - 10444 1719 490 aa, chain + ## HITS:1 COG:Cgl1263 KEGG:ns NR:ns ## COG: Cgl1263 COG0008 # Protein_GI_number: 19552513 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 3 487 4 486 493 653 64.0 0 MTVRVRFCPSPTGTPHVGMVRTALFNWAYAKHTGGTFVFRIEDTDAARDSEESYGQIIEA MKWLGLDWDEGIDVGGPHGPYRQSQRGDIYAEIIEKLKAGGHIYESYSNAEEIEARHRAA GRDPKLGYDGFDRDLTQEQIAEFKAQGREPVWRVRMPDEDITFTDMVRGDITFKAGSVPD FVVVRANGQPLYTLVNPVDDALMGITHVLRGEDLLSSTPRQIVLYEHLKAIGVAERTPEF GHLPYVMGEGNKKLSKRDPESNLFHHRDNGFIPEGFINYLALLGWSIAADRDIFTVDELI EAFDIHDVLPNPARFDVKKATAINADHIRMLDVEDFAQRLVPYLQTAEVLPQEPSDAQLA VLKEAAPLVQTRMNLLSEAPDLLRFLFVSDDNFEFYEDGLKTLKDTAPEVLDQAIATLEP ITDWTTDTLHTALQETLVDKAGIKPRLAFGPLRVAVSGRRISPPLFESMEILGKESSMFR LNKLREHLAE >gi|294971087|gb|ADNU01000047.1| GENE 9 10529 - 11797 1120 422 aa, chain + ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 3 420 14 423 427 308 45.0 1e-83 MLTRTYTIPGLTVDEHTVTVPLDHFGDTPGELEVFARVYSLPGSTEKPYLVYLQGGPGFE AQRVTEPSGWVGRALREYNVVMLDQRGTGQSSPVGFVDGHFVGTGENQTPTAVADYLTHF RADAIVEDAEVVRESLGASTWAVLGQSFGGFTALRYLAEHPVSLERVMFTGGLPRVPGAD GGEADADPAIVYRDTWEIMAGKSDRFFKRYPHTREAYERLFERAADGIELPDGTVATQAH VRGLGQFLGASGGAERLNYLLALGDSMAGRHDLQDALTFGARNPIYAVLHESCWASSTAT RWAAERARPEGQSPFALAGEHVTQDHFESGPLEAWKDVAHVLADHEWPVMWDADKLAQVR GKVPAAAAVYFDDAYVPCKHSLATAKLAGVEPWVTNEYEHNGLRASGERVLDRLLAMTRG EV >gi|294971087|gb|ADNU01000047.1| GENE 10 11825 - 12085 310 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396009|ref|ZP_06806193.1| ## NR: gi|295396009|ref|ZP_06806193.1| hypothetical protein HMPREF0183_1691 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1691 [Brevibacterium mcbrellneri ATCC 49030] # 1 86 1 86 86 82 100.0 1e-14 MLLPTVVFSSTLATGPQVPFYADAGVVAMMFVAPVSLILLVTAIVLVVFARLQPLHTTLL ILLAVFVPILGSIIAIIIATVLKRRN >gi|294971087|gb|ADNU01000047.1| GENE 11 12485 - 13153 566 222 aa, chain - ## HITS:1 COG:no KEGG:KRH_05300 NR:ns ## KEGG: KRH_05300 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 70 216 16 151 155 64 35.0 3e-09 MTDNYPSSGAPNSSTPPSNVPNSSNAYGSGPYGSGLQVAAGSAPQGSAQTGPVAPQQQYA SATVQPTAGQPVASQPAAGQPYPAANYNTGEVSQTTGQLQAQAPKGNGFTRFFKALFDLK FENFVTINFASVLYTLSIVTAVGTWLLWIVITALASAAASGLSYALSGSGGGMLGMMFLP TIFLGWIPALAQIILSRIALEFMVASIRTAQNTTEMRRALTD >gi|294971087|gb|ADNU01000047.1| GENE 12 13568 - 14479 318 303 aa, chain + ## HITS:1 COG:Cgl2514 KEGG:ns NR:ns ## COG: Cgl2514 COG2267 # Protein_GI_number: 19553764 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Corynebacterium glutamicum # 50 294 1 223 228 197 44.0 3e-50 MALYPYAAFLPAGRRAAGKREPEETWWAWRGHSIHIARARRSDAPARILVIHGAGGNSAA LWPLAAQLAERGLDIAAVDLPLYGRTVSPNPETVRYEDWVQLLINLVEAEHDGRPLTLLG ASIGGMLAYEVAAQTSLVTTVAATCLLDPRDWRSRTHMTRFGPLGALGGVLSALARGRVA SAMISMRWVANLSKMSRNPGLSNLCATDPRGGGAKVPLGFLASYMRYRHTSPEQVTTPIA LLHPSRDAWTPVELSMRVFRRLASPDKVIMLRECGHFPIEEPGITDLVSAVLEITDKAHR SRG >gi|294971087|gb|ADNU01000047.1| GENE 13 14790 - 15104 134 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396012|ref|ZP_06806196.1| ## NR: gi|295396012|ref|ZP_06806196.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 104 1 104 104 188 100.0 9e-47 MTCSRTPRPALDDVHVVTFATAVIDDVRRRAQQGRDVYHKDAPSAGRAIADKILPSFPTC PIPDIKRLAQTPNQWRNEYLGYADIDGGRAGRGLLDRVQRDPPS >gi|294971087|gb|ADNU01000047.1| GENE 14 15114 - 15248 65 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERAKGGTPGTSRPHRPDISTHGDSANYLTRDTEMLVLLAMRVA >gi|294971087|gb|ADNU01000047.1| GENE 15 15313 - 16491 936 392 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396013|ref|ZP_06806197.1| ## NR: gi|295396013|ref|ZP_06806197.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 392 1 392 392 796 100.0 0 MPYTNYETKVENPRHQHNIMAIVGNGFDIQALSDLGVRGDTKYTSFYYFLKSRSFKTDNL IFEQMSELETNGAENWSDVEGAIDRLYRAGTAVAEISDAMHEIQGEFATFLDQLVNPSTL TKLNEQTVTHRMTLASLMEFLGDLSDPDEYSRMSFPATTDIGDIYNFLFINFNYTSLLDN YLYLDKTQFEPHPFISSDRQTYFHPNPRGHNVLLPGPRKSCERQEFSAATYLATDIIHPH GTQSTPRSLLFGIDPHEGDEVGRVLSKPYWAQNEREYADLFPNTNLFIIFGTSLGSTDRW WWHNILATLQRQDAQRPDILIYWYDDIGEATPDSVKARLVEASGLAVTDELRQAVNAHTR VILYDNTTPRAFLNTNPDHIPLWIHRNNQAMP >gi|294971087|gb|ADNU01000047.1| GENE 16 16632 - 16751 87 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSWVHWWNTTRLHEALDYRTPAAVEVAYTHTMTTAPVAV >gi|294971087|gb|ADNU01000047.1| GENE 17 16924 - 17643 530 239 aa, chain - ## HITS:1 COG:MT3067 KEGG:ns NR:ns ## COG: MT3067 COG1414 # Protein_GI_number: 15842545 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 7 218 39 249 267 179 55.0 3e-45 MSNQNGSGVGVIDKAALVLSALEAGPASLAELVSLTGLARPTAHRLAVALEYHRLVGRDI QGRFVLGPRLSELSSAAGEDRLLAAAGPVLNQLRDRTGESAQLFRRQGDLRLCVAAAERP VGLRDSVPIGATLSMRAGSAAQVLLAWEEPDRMHTGLRGARFSATILSGVRRRGWAQSIA ERERGVASVSAPVRGPSSRVVAAVSISGPVERLTRQPGRLHAQSVLEAAKALTDALNRA >gi|294971087|gb|ADNU01000047.1| GENE 18 17784 - 19187 1306 467 aa, chain + ## HITS:1 COG:MT3066 KEGG:ns NR:ns ## COG: MT3066 COG0065 # Protein_GI_number: 15842544 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 466 10 472 473 710 75.0 0 MGTTLAEKVWADHVVTAGQNNEPDLIYIDLHLVHEVTSPQAFEGLRLAGRKVRRPDLTIA TEDHNTPTLDIDKPIADLTSRTQIDTLRKNAKEFGIRLHSLGDVEQGIVHVVGPQLGLTQ PGTTVVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTLSLKPFKTMAITVNGTLPEHSS AKDIILAVIAKIGTNGGSGHVLEFRGDAIRNLSMEARMTLCNMSIEAGARAGMVAPDDIT FEYLRGRPHAPTGDAWDQAVAYWKTLRTDENAEFDAEVVLDAADIEPYVTWGTNPGQGLP LSQSVPDPAKIVDENERIAAENALAYMGLTPGTPLKGIAVDTVFLGSCTNARIEDLRSAA SVLRGRLKAPNVRMLVVPGSAKVRLQAEEEGLDKVFTDFGAEWRFAGCSMCLGMNPDQLS EGERCASTSNRNFEGRQGKGGRTHLVSPVVAAATAVNGTLSTPADLA >gi|294971087|gb|ADNU01000047.1| GENE 19 19220 - 19819 610 199 aa, chain + ## HITS:1 COG:Cgl1285 KEGG:ns NR:ns ## COG: Cgl1285 COG0066 # Protein_GI_number: 19552535 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Corynebacterium glutamicum # 1 194 1 195 197 269 66.0 2e-72 MEKFTSHTGVGVPLNRSAVDTDQIIPAVYLKRVTKTGFDDALFARWRKDPEFVLNREPYA NGSVLVAGPDFGTGSSREHAVWALRDYGFKAVLSSRFADIFRGNAGKNGLVVAQLEQGDI DLLLKRIENQPGIEVTVDLETRTVQCDDLTLPFDIDDFTRYRLMEGLDDISLTLQHEGDI DTYEAQRPGFKPTTLPIPE >gi|294971087|gb|ADNU01000047.1| GENE 20 19888 - 21207 945 439 aa, chain + ## HITS:1 COG:CT455 KEGG:ns NR:ns ## COG: CT455 COG0766 # Protein_GI_number: 15605182 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Chlamydia trachomatis # 4 436 6 434 444 357 45.0 2e-98 MLIVHGGTPLAGTVRVRGAKNLVSKAMVASLLGETPSVLRSVPRIRDVEIVTGLLELHGV RTHTAPDGDQPDGEIHMDPSNIESGSIPDIDAHAGSSRVPILFCGPLLHRLGQAFIPDLG GCRIGDRPINFHLDVLRQFGATVDKTPGGIKLEAPQRLTGTKVELPYPSVGATEQVLLTA VRAEGTTELKNAAVEPEIMDLVAVLQKMGAIISVDTDRVIRIEGVDSLRGYTHRALPDRI EAGSWASAALATGGKILVEGAQQEPMITFLNVFRKIGGEFDIREDGILFAHPGTELQSVA LETDVHPGFMTDWQQPLVVALTQAKGLSIIHETVYENRFGFTDALVRMGANIQLYRECLG GTPCRFGRMNFNHSAVISGPTALTGKDIEIPDLRGGFSHVIAALAAEGTSNVRGFQLLNR GYEDFTHKLESLGARMEIP >gi|294971087|gb|ADNU01000047.1| GENE 21 21204 - 21938 619 244 aa, chain + ## HITS:1 COG:ML0892 KEGG:ns NR:ns ## COG: ML0892 COG0204 # Protein_GI_number: 15827414 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium leprae # 35 241 17 221 244 97 33.0 3e-20 MTQSLSDVTFTPEDQKRTKRLARLVAPTLKASYRVFGRWVDENPHNIPKDGPAILAVYHA SLLDPVFVALSLWSNGRLPRFMAKSSLFTGIIGRPMRALGQIPVLRDSATASDALKYARK ALDAGECVVIYPQGTLTKNPELWPENFKTGAARIALESGVPIVPVAHWGTSALMPPGAKK PAFKPGNIVRISYGEPIDVTGIEPTRENLRAVTSHIEAVIARDVARLSGKPLPERYTHAL ELSL >gi|294971087|gb|ADNU01000047.1| GENE 22 21935 - 22939 967 334 aa, chain + ## HITS:1 COG:Cgl1288 KEGG:ns NR:ns ## COG: Cgl1288 COG0240 # Protein_GI_number: 19552538 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 330 2 332 332 311 53.0 2e-84 MKIAVMGAGSWGTTFAKVIADSGNPVTVWARKEEVAHEINTQHTNSRYLGDIVLSDLITS TSDPVQAVSEADVVVLAIPAQSMRTNLSQWKDHLKADCVLVSLMKGIEGTSGKRMTEVIA EVAEVPLSRVAVVSGPNLAKEIAESQPTATVIGCESATTAEALSDLCANSYFRPYTNADV VGIELGGAIKNVIALAVGIADGQGLGDNSKASIITRGLAETTRLAVAMGAQQHTLSGLAG LGDLVATCASPLSRNRTFGRLLGEGNTVDEVAAQMTQTAEGVKTAPAVLALGDAYGVELP ITQAVAAALDGSLAVSDLSGVLLARKRKDEAPVR >gi|294971087|gb|ADNU01000047.1| GENE 23 22971 - 23519 609 182 aa, chain + ## HITS:1 COG:ML1289 KEGG:ns NR:ns ## COG: ML1289 COG1881 # Protein_GI_number: 15827663 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Mycobacterium leprae # 11 180 7 174 176 172 57.0 3e-43 MSTSTDYLNSPFARMNEVPRFDLTSPDITEGQPLAVAQASGIMGIDGGQDRSPALSWSGA PEGTQAYAVTCFDPDAPTGSGFWHWVLTDIPADVTSLEANAGDPDAGLLPEGAVMMRNDA GSARFVGAAPPEGHGPHRYYFIVHALSKPLGLEPDASPAFVGFNMFFASIGRAWIQATYE VK >gi|294971087|gb|ADNU01000047.1| GENE 24 23522 - 24631 884 369 aa, chain + ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 3 363 2 354 364 279 42.0 7e-75 MTQRLLVAVLFGGRSPEHSVSCVTAAGVMNEIDPNAFRLLPIGITPEGKWRVVHDWKSFS FDRDNMPRIEDNQTEVFVSPSKNGSLIERDAQGAFADLGSPDIVFPLLHGQYGEDGTMQG LLSLMDVPFVGPGVFSSSAGMDKHFTKMVLRAAGIPTADWKTVSLTQYQADPQATIDSLQ ELGLPAFVKPSRAGSSVGISKVSDTSGFKAALDDAFAHDTKVIVEPFVDGREIECAVLGS VNDRELKASSPGEIIVSGDHEFYDFDAKYLDLDATTLTCPADVEPDVAERVRDIACQTFR AFDCTGLTRVDTFVRPNGEVLVNEINTSPGFTPTSGYPFMWEQSGLPYKDLITELLKIAV EDHKRSATE >gi|294971087|gb|ADNU01000047.1| GENE 25 24653 - 25162 308 169 aa, chain - ## HITS:1 COG:no KEGG:Achl_2250 NR:ns ## KEGG: Achl_2250 # Name: not_defined # Def: secreted protein # Organism: A.chlorophenolicus # Pathway: not_defined # 2 151 10 159 167 121 45.0 1e-26 MRRVLSICFVGLTLAGISACTPTVVVEPAPQATSAACADVMLRLPDAIGEYQNRKTSSQA TDAWGDPTAVILRCGMEPPAPTTDPCVHVDGVDWISVEEKDDSWRFVAYGRTPSVELLVD PKKVSGADVLTAVSGAVSTLEKTGECVSGKDATVVDENNNPIATDSPTP >gi|294971087|gb|ADNU01000047.1| GENE 26 25188 - 26168 834 326 aa, chain + ## HITS:1 COG:ML1676 KEGG:ns NR:ns ## COG: ML1676 COG0611 # Protein_GI_number: 15827887 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Mycobacterium leprae # 10 313 14 313 325 139 38.0 6e-33 MRKLVAMQQTLGSLGEDRVLERILSHIDPGDHVSVGPGDDAAVSTLPGPTVTTTDMLVEE SDFLREWLDPYRLGIKAAAQNISDIYAMGATPHGLLMSLSAPSDTHIDVIEEFTRGLNDE AQRAGAAIIGGDLSTGGLITIAITAVGYLRTEPILRSGARPNDGVFLAGTVGHAAAGLDL LFAGHRLGNSDTDTFIETQLAPRPDYTTATRLPGWAHAGIDASDGLSGDLGKVARKSGVD IELDPEAIAGLAQQVLPAARILGDPDLALTWVLHGGEDHGYLVTGPADMAPVGLTRIGTC VTGTGKLTLDGTDIQPGAFTHFSEAQ >gi|294971087|gb|ADNU01000047.1| GENE 27 26165 - 27664 1025 499 aa, chain + ## HITS:1 COG:Cgl1293 KEGG:ns NR:ns ## COG: Cgl1293 COG1461 # Protein_GI_number: 19552543 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Corynebacterium glutamicum # 4 302 38 340 567 141 35.0 4e-33 MKDSARVNARLAARWARRAVERMKRRRHDIDEINVFPVPDGDTGTNMYDTVRSAYRAVEE LTGTVTMHRVVDAMATGALRGARGNSGLILSVALRGVADALDGVAELDAHTFAGAMELAA SRAEQAIATPVHGTMVTVLHEMAQKAREEADAGSDLLTQLEAVRKRSREALGETTGQLAV LSDAHVVDAGSTGIVEMFDLLYLTVAGGAPSSDGIRYAPAQGIEMRTEVGLELVFWCAEQ KDKTREVTRALTKLGGTSIVVSWPKIHVHVADDETARSVLAACEPLGIVQLRMEDLSEEG GSRINVVGLASGMGVLMQTALTQAVAVNANVPGWADHVDELTEDGAHTIVSGVPSVTHEL LTAAPVDTVLTAPGPVSLLAAMAVFDPEVEAQDCRDDMREAIEGTREGVITRPRPEGPFL SEDGETRAASDSLSETVLSLVESLNHGQQAEIITIVTGRDVQATGLVATVAQLKTQYPGV RVDVIEGDVPECIVAVGCE >gi|294971087|gb|ADNU01000047.1| GENE 28 27667 - 29880 1703 737 aa, chain + ## HITS:1 COG:MT3051 KEGG:ns NR:ns ## COG: MT3051 COG1200 # Protein_GI_number: 15842526 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Mycobacterium tuberculosis CDC1551 # 25 724 24 723 737 456 40.0 1e-127 MPGPADTLFDHFVHTREQKTAFSNLGLSTVDQVLRHVPRTYLFPGELTPMEELEPDTTAV VLGKVLSVDLIRLRDRKRSLTKVKLGGRYTAVHLTFFNMPWLAKNLELGQNLAVSGKVVD TQYGRQINQPRILDSNLELDDGEWGKGSVSMHQEMQMTKPMPIYSVKGKAKLSTVTRVIH RMLDRLPLEAFEDTMPQHVRSEMGLYSYKEALEGIHRPRDKAQLQQAREWFAFEEAFALQ SYMLSNKQVHEKEAAPVLAGAAMGKLDQFDQHQTFELTRSQKQAGTEISRDLVRSTPMNR LLHGDVGSGKTLVALRAMLQAVDSGYQAALLAPTEILATQHVGSLRSLLGELASDGFTDG VRIELLTGSMSGRERKRVATELAAGIVDIVVGTHTLLSDTTIFDKLGLVVIDEQHRFGVE QREQLREKGGGKVPHTLVMTATPIPRTVALTVYSDLDVSTLRELPGGPKQVSTHVVPMYE KPRWFNRVWEVVSEQVQSGHQTFVVTSRIDSEEDPDATDEGRSSGAHGGVAGETGGSDPG RPRLLGVEELADKLRSLPELKDVRIETLHGKSEQDVKETAMQRFKDHEFDVLVATTVIEV GVDVHNARVMVVFDADRFGVAQLHQLRGRVGRDGKPAMCFFVTQNREDSESRERLEYVAS TTDGFALAEYDLKTRKEGDVLGTSQWGAARLRFVSIKDENLIMTARNAAQGALQDDPQLA QRSALALYLTDIMQIEE >gi|294971087|gb|ADNU01000047.1| GENE 29 29881 - 30426 245 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 177 13 193 199 99 36 6e-20 MRVIAGKYKSHALTAPQGADTRPTSDRVRESLFATLDMLGMIDGALVLDLFAGSGALGIE ALSRGASDVVFVEKAHRAVVTVKKNLAAIGEKRLVVQGDATAPAVAGEFDLILADPPYPM DETAITRMLTRAEALLKDDSSLIVVERSARSPQPEPPETLNLYKSKTYGETAIWMYERAR I >gi|294971087|gb|ADNU01000047.1| GENE 30 30430 - 30924 291 164 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 4 161 7 158 164 116 38 3e-25 MKVVCPGSYDPVTRGHIDIVARAARLFDQVVIAVVHNPNKNGTFSVSERLELVKAGLQED PRTTSAGNIEFDDVPGGLLVDYCDSIGAVGVVKGIRSGTDYAYELPMAHMNRHLKNIETI FIPGDPLYEHISSSLVREVHSLGGDIEGLVPAAVLEALNERAKK >gi|294971087|gb|ADNU01000047.1| GENE 31 31008 - 31517 328 169 aa, chain + ## HITS:1 COG:Rv2926c KEGG:ns NR:ns ## COG: Rv2926c COG1399 # Protein_GI_number: 15610063 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Mycobacterium tuberculosis H37Rv # 4 169 29 202 207 76 31.0 2e-14 MKELVLDLRSLGLFKKPGEWIKHTMTVGAPEDLRNEMIGVPTGDPLDIELQLESVDEGIY VTGTVSATAKGQDARTLEDMTLPLNVDITELFVYDRPQEDEDSYEIENGMLDLEPAVRDA LVMSLPFRPLKSGEEGEFHYTVGDVEEPVDDTDPRWSTLKSLLTEEKES >gi|294971087|gb|ADNU01000047.1| GENE 32 31520 - 31723 295 67 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148272537|ref|YP_001222098.1| 50S ribosomal protein L32 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] # 1 66 1 66 67 118 83 9e-26 MAVPKRKMSRSNTRHRRSQWKAKAPALVKTVENGRVVYSRPHQARVVEDSAGTPLFLEYK GRKVADA >gi|294971087|gb|ADNU01000047.1| GENE 33 31734 - 32426 651 230 aa, chain + ## HITS:1 COG:MT2995 KEGG:ns NR:ns ## COG: MT2995 COG0571 # Protein_GI_number: 15842471 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Mycobacterium tuberculosis CDC1551 # 8 204 12 211 240 196 55.0 2e-50 MSELNKRLGVDIDPETLRLSLTHRSYAFENGGIPTNERLEFLGDAVLQLKTTKWLFDHNT EASEGRLAKMRSAVVNSRALAGVARTYGIGEFLLLGNGEERTGGRDKDSILADTVEAIIG ACYVSQGPDAANALVERLVGPLLEDAVNLGAGMDYKTTLQEAAADLSLGAVHYDVTGEGP DHARVFTAVAYLGETRWASGEGTSKKNAELVAAEIAVKKILEKYPGWHRN >gi|294971087|gb|ADNU01000047.1| GENE 34 32457 - 33446 640 329 aa, chain + ## HITS:1 COG:Cgl2021 KEGG:ns NR:ns ## COG: Cgl2021 COG0266 # Protein_GI_number: 19553271 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 1 324 1 284 286 210 40.0 3e-54 MPELPEVESVRQGLSVWLTDATITRAQVLDARILGTTSARNVPIERVASFERALEGVRIV SVERRGKYMWMPLAVGGLVGGGLVSDGEARDGEAAEVDEWALAMHLGMSGQARIHEAEDP LHPHTRAVFDVAGPAGVGQIRFVDQRIFGHLGVERLVLGVAGTPGATGTAGERRLVAESA RGAGLDPFEVGFSVPMVARAIARKNVAIKSALLDQRVVSGVGNIYADEALFEAGVHPAAR ASRLRISRIERVLEAARDVMARALEVGGTSFDALYVNVNGESGYFERSLQVYGREGQPCV RCSTPITRVVLGGRSTHVCVKCQKPQRVC >gi|294971087|gb|ADNU01000047.1| GENE 35 33373 - 34605 754 410 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396033|ref|ZP_06806217.1| ## NR: gi|295396033|ref|ZP_06806217.1| hypothetical protein HMPREF0183_1715 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1715 [Brevibacterium mcbrellneri ATCC 49030] # 1 410 1 410 410 706 100.0 0 MSATTRALCGPRVIDPYIRLATLIVGLFIGAPSSFELLTDLNAQLDIAFGLLIIALPYFP RTVALIITAVSITLTVGLTANAVINDLALSVAGAVLLTYKRWKLTSLPFASLVALNAYLL IGSEYYSFFHCAISIGTFVLASTLGWAAGTTEQRITRLIADAAAQAAESERREADLRNQF ALDAHDTVSHGLTKENFMLRNALSKTEPGSELNQDITEILLANRTNQQNLRSLLAGLHST TTNTVALSHAVETVCDDIREAFSAAQRPIRITSAVTDQPCPPQLTAGVGLLLTELATNIL KHGDINDQSATLDVTCDGPNLLITAQNTPRQLTPRPEKYTPPTTTAFSVERRVTMLNGTA DFHTTPESFTVTATVPLNTPGQSPTPSNTPAAVSDTSHTRASTAHPAQPA >gi|294971087|gb|ADNU01000047.1| GENE 36 34731 - 35492 492 253 aa, chain + ## HITS:1 COG:BS_yycO KEGG:ns NR:ns ## COG: BS_yycO COG3863 # Protein_GI_number: 16081080 # Func_class: S Function unknown # Function: Uncharacterized distant relative of cell wall-associated hydrolases # Organism: Bacillus subtilis # 8 252 7 243 245 92 29.0 8e-19 MKKTPFLVSTSIVALLVGSVFSGPAHATTKDSSMSTEEAVERLVELNPGTTEEEMSAGLR EYAEENGQSYEQVVDDALQAAEEEEAQWQKDKAEYEFDRETRAAKAVGKLPRVDVGGDIF YNPASTVGIQHGHVGIYAVNDYIVEAPGIGKLSHRVHHSTVKVYKTSQLLYVKITETRRR SAGKYARDKLQKKPYRKNFAVNKDPYADRMNCSQLVWAAYKNSVKVDLDGNGGPGVYPKD IVKSTKTKTWRTY >gi|294971087|gb|ADNU01000047.1| GENE 37 35567 - 36754 440 395 aa, chain + ## HITS:1 COG:no KEGG:AARI_08070 NR:ns ## KEGG: AARI_08070 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 42 392 42 393 393 90 25.0 1e-16 MKRSIASVCVVGLVAAGLSGCSWFDRSGVVVGEDEFHITEDTLFATQLSPIYQEMDTAPG INTSYLVTFDRDGSVQALKIHPMAIGVPIWQGDTLVAVDRKFDYFVTDKVLMIDHPKVEV MTNIVASSTTDEVFALMNDGDTEDGYKTSVETLTQGGHTTTKLDGAYLMTSECDGVLYGI GDAEGRVVARAPKELGDHVTALVQASGTANHQEHVISYQRTHEGEGSATPLPCFTDSIAS LALDVSEPDRPVTLTGSVRVRNVRDGSHHDVVLRNPDGTRYETYIEAPNYDLKSVSGRSF NWLNNDGVYWRTNIDTGVTEKLFQIQESEQFFAVGIAAFSPEGIHYLYEGDDGTVIKSFS KEDGSLIRTLEVPGFDTITARTRQHWGLAVSPNVP >gi|294971087|gb|ADNU01000047.1| GENE 38 36772 - 37959 508 395 aa, chain + ## HITS:1 COG:no KEGG:AARI_08070 NR:ns ## KEGG: AARI_08070 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 32 392 32 393 393 93 25.0 2e-17 MKKLVASVCVVGLVAAGLSGCSWFDRSGVVVSEDEFRITEDTLFATQLSPIYQEMDTAPG INTSYLVTFDRDGSVQALKIHPMAIGVPIWQGDTLVAVDRKFDYFVTDKVLMIDHPKTEV MTNIVASSTTDEVFALMNDGATEDGYRSVTETITPQGYTTTNLDGAYLMTSECDGVLYGI GDAEGRVAAQASKELGDHVTALVQASGTANHQEHVISYTKGLFNEGGSSPLPCFSDSIVN LILDEAPLGQPEPLTGYLRVRNVREGSYKDVPLRQPDGNKLEHKFDGPYYDRVGVAGRNF NWLDRDGSFFRTNVDTGVTEKLFQIQESEQFFAVGNVAFSPEGIHIIAELEEGTVIKSFS KEDGSLIRTLEVPGFDTITARTRQHWGLAVSPNVP >gi|294971087|gb|ADNU01000047.1| GENE 39 37977 - 39197 515 406 aa, chain + ## HITS:1 COG:no KEGG:AARI_08070 NR:ns ## KEGG: AARI_08070 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 32 386 32 376 393 95 24.0 4e-18 MKKLIASVCVVGLVAAGLSGCSWFDRSGVVVSEDEFRITEDTLFATQLSPIAREMDTVPG INTSYLVTFDRDGSVQALKIEPMEIAVPVWQGDTLVAIDRKFDYFVTDKVLKVDHPKTEV TTYLYPSTTSDEVFALMNHGWNEDGSSYHAYTETITPQGYSTTDLDGIFLTGSECDGVLY ALGDATGETVKHAPPELRDNATALVQASGTSDGKQRIVEMSQTHEAETSSEPLPCVNGRI VQLLDTEIVQKSKSGEPRYTYKAFVRIRDTKTGKHKDVPMKNADGSPFVYEDLQFLTSPY YELGSRDGSSFRWLAVNGSFWQTSIDTGVTEKLFQIQESEQFFAVGNAAFSPEGIHYLYE GDDGTVIKSFSKKDGSLTRTLEVPGFDTITARTRQHWTLAVSPHVP >gi|294971087|gb|ADNU01000047.1| GENE 40 39194 - 39835 425 213 aa, chain + ## HITS:1 COG:BS_yxjL KEGG:ns NR:ns ## COG: BS_yxjL COG2197 # Protein_GI_number: 16080942 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 4 209 8 216 218 99 31.0 3e-21 MTDILLCDDDSWALRGLEHVLSEAQGFTVVGSARQGEDAVALARELRPDIVLMDISMPPG ISGITATAQILANNPNQTVVALTTTASGPGIRHMLESGAVAVMNKSLPPERFVDVLTHIV HDEPARYLATLREDLILTRPDPSAPLTEKLTQKEEEILLLLCDGLTYADIAKREHCSVAT VRTHAERLRTKLHAQSVSQLILRAIQHKIYIPK >gi|294971087|gb|ADNU01000047.1| GENE 41 39890 - 41470 1262 526 aa, chain - ## HITS:1 COG:Cgl0226 KEGG:ns NR:ns ## COG: Cgl0226 COG0471 # Protein_GI_number: 19551476 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Corynebacterium glutamicum # 58 526 66 525 527 411 52.0 1e-114 MPDYLDDLRPDPDKGREVDYKSPGERATGIPAKTNAFRWAGFSIGLVIALALWFLLPETV GHNARLTAAIAGLMATWWMTEAIPIPATALVPLVAFPLFAQPIASDGAEPKPLTFSEVGA SYGNATIFLFMGGFFIALAMQRWNLHRRIALGVLRIMPNSPGAMIAGFMIATAFLSMWVS NTATAVMMLPIGMSVLTLVNEATGKSSTTSVTDVVQSKFGTALMLGIAYAASLGSLGTLI GTPPNTFLAGYMAETQGVSISFVGWMAVGVPVSAAFLVITWFLLVKVLFKPEISEIPGGN ELIRKELDRLGPISSGEIRVLSVFILTALAWITIPLVFEKPPIDDAGIAMASGLLLFLLP AGAARGVKLLDWQSAKELPWDVLLLFGGGLALSSMFEKSGLTKVIGDMATGMAEVPLILV IAVLAGAILFLTELTSNTATGATFIPVAAGIAMGMDVNVLLFAAPVALAATCAFMLPVAT PPNAVAYGSGYVTIGQMVRGGIWLNLIGIVLITLASMTLLTWVFGL >gi|294971087|gb|ADNU01000047.1| GENE 42 41759 - 45271 3395 1170 aa, chain + ## HITS:1 COG:ML1629 KEGG:ns NR:ns ## COG: ML1629 COG1196 # Protein_GI_number: 15827858 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Mycobacterium leprae # 1 1162 1 1190 1203 618 38.0 1e-176 MFLKTLTMRGFKSFAHATTLELEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKNLRGGK MDDVIFAGTAKKQGLGRAEVSLTIDNTDGAIPIDYTEVTISRTLFRSGGSEYSVNGAPAR LLDIQELLNDSGLGKEMHVIVGQGRLDEILHADPETRRGFIEEAAGVLKHRRRKDKALRK LTGLQTNLDRVGDLRHELSKQLGPLARQAKAATRAATVQAQLRDATARLLADDIVRVQAK LEATHTTEDETIRQELENTVATLATHIEQFTSRVSQHEAHTEQTEKMLARVTKAVSKAKA LAERARDRNELLLSVQPSSQTGEDPRALENRAAHYLRERDTAREDLEQREQKLQDALEKC QQAEQELATANAELAQQRELIRTHLRERASLESEATVATRALEEAKKELATLQDQQTDTS AEEKALTEAQARARQLEHSETDLDSQHETASAATQKARDHLTNVRENLAEARTNLRQIQA RIEALTLAATFASHDIGESGIDGVGGPVAESLTITPGHEPHVTAVLGSLATAVVVSTMDT AQQVLTQFDGDVDLVVLGEDAEVVPTPAPDGTSLRGPAGEHPVREYVTSDSAVMNNLLDH ALAGVYEAPDSTTAHTWMHEHPACTFVTSRGEVFSQHRIRRAGGEDSARMQAKAELEKAE RTQVEATEAVAALEKNEQTTQAEFEKAQTAENEALDALYESDAKIMAAQAEVTKAATTLN DVHERINARDSRMKVLKDHIATATQRAHDASEKLNSNTQSVDTEPDTSVVEALTAEHREL NETVMELKVSVRAAGDRVKFLTDRAQALNRQAEREREAREKAKEEKERRARMAHEAKTLG ETATQLADHFSGVEERLTEQLTALKHQRHTHREELDQAYEQRAQAMEKLAQLKEAQHAAN LARERHVLQLEELTRRANEEVGLGVENLIEQFGPHVPVPVEGENPVPYVRADIQKIAKQA KKEITAIGAVNPLALEEYNALKERHDYLEAQINDIEKSRAELLKLVDEVDAHVRDVFAEA FADTKREFERIFQRLFPGGEGELTLTDPNDMLTTGVEVFARPAGKRVKRLSLLSGGERSL VAVAILVAIFKARPSPFYVMDEVEAALDDVNLSRLLTVFQELQEASQLIVITHQKRTMEI ADALYGVTMSGDGISKVISQKLSRETTSAH >gi|294971087|gb|ADNU01000047.1| GENE 43 45467 - 45847 236 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396041|ref|ZP_06806225.1| ## NR: gi|295396041|ref|ZP_06806225.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 126 1 126 126 241 100.0 1e-62 MSGFIVVLLGLGITVGIGLVIVILVAMSASGQNKQAHTPQRFRLPAEFLGHDKSVYGFFG HDDDHSHLATREQAAVTAMRDESYILHPQPRRHAAPSIFTLRPRTRHWKIPATGTGMRTA FHLLFR >gi|294971087|gb|ADNU01000047.1| GENE 44 45949 - 47076 664 375 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 62 375 10 322 336 260 45 2e-68 MDLQAQIVYGILGLVVLVALGLFFLVPRKPKKPEHTLPDDTTGSTQGAPAPEEPAQDEPP REVPTEPTTRLAKLRNRLAKSNNAMGRGLLALLSRDTLDEATWEEIEDTLIVADLGVDTA TELVDNLRERVRVLGTRDLSTVRALLREELIKVVDPTMDRTLRTETGGDEPSVVLVVGVN GAGKTTTVGKIARVLVASDRTVLLGAADTFRAAAAEQLTTWGERVGVETVRGPEGSDPAS VAYSAVERGLKDNVDVVLIDTAGRLQNKKGLMDELGKVKKVATRPLGEGHELDEVLLVLD ATTGQNGMQQAKVFAEVVNVSGIVLTKLDGTAKGGIVVAVQRELGVPVKLVGLGEGADDL APFVVEDFVDALLED >gi|294971087|gb|ADNU01000047.1| GENE 45 47158 - 48816 1833 552 aa, chain + ## HITS:1 COG:MT2984 KEGG:ns NR:ns ## COG: MT2984 COG0541 # Protein_GI_number: 15842459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 1 471 1 501 525 524 61.0 1e-148 MFNSLSDRLTSTFKNLRGKGRLSEADVDATIREIRRALLDADVALPVVRAFTGRVRERAL SAEVSEALNPGQQVVKIVNDELVQILGGKTRRIQFAKKPPTVIMLAGLQGAGKTTLAGKL AHWLKSDGHRPMLVAADLQRPNAVNQLEVVGSRAGAYVYAPEPGNGVGDPVKVARDSMEV AKSKLYDVVIVDTAGRLGIDEELMQQASDIRAAVNPDEVLFVIDAMIGQDAVTTAQAFNE GVDFTGVVLSKLDGDSRGGAALSVAEVTGKPIMFASTGEGLKDFELFHPDRMADRILDMG DILTLIEQAEKTFDAKQSEKLAKKVQSGESFDLNDFLSMMESIKKMGSLKKMLRMMPGMG QYKEAIDAFDDREIDRVEAIIRSMTPQERANPKILNGSRRARIARGSGNSVTTINQLMDR FAQAQKMMKQFGGGRRMPGMPAMPGGGGAGGGMPGMPGMPGGGMPGMSGMPGMPGGGGPG GSSRRKKGPAKKKGKAKSGNPAKRAQAERDEQLRREGKLPKKQGASFGGIDLDDDEIDFS KLPKGFGGGFGR >gi|294971087|gb|ADNU01000047.1| GENE 46 48813 - 48989 80 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396044|ref|ZP_06806228.1| ## NR: gi|295396044|ref|ZP_06806228.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 58 1 58 58 93 100.0 4e-18 MFRKFSFVGLNQFFRMNFGRLEVERVLFTGQVQANILPNFLRCFQLERKRGKYPVPQL >gi|294971087|gb|ADNU01000047.1| GENE 47 49017 - 49460 503 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62422971|ref|ZP_00378146.1| COG0228: Ribosomal protein S16 [Brevibacterium linens BL2] # 10 147 1 136 136 198 74 7e-50 MAVKIRLTRMGKIRKPFYRVVVADSRTRRDGRAIEEIGVYHPTENPSVIKIDSERAQYWL SVGAQPTDQVKALLKLTGDWGKFKGEGSTENTVKGQPEKEAFVAPEAKSVIKEAITPKGG EDKAEESADDAAAEEAPADNAEEKTEA >gi|294971087|gb|ADNU01000047.1| GENE 48 49463 - 49696 182 77 aa, chain + ## HITS:1 COG:MT2976 KEGG:ns NR:ns ## COG: MT2976 COG1837 # Protein_GI_number: 15842451 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Mycobacterium tuberculosis CDC1551 # 5 72 8 75 80 71 63.0 3e-13 MLQQALEHLVRGIVDFPEDVSVRERNTHRGLTLEVRVHPDDLGRVIGRSGRTAKALRTVI GALAGHGERVRVDLIEA >gi|294971087|gb|ADNU01000047.1| GENE 49 49933 - 50250 157 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHKRYNLNPYNHHSQVLTGRGLSENGQCLICLHPEHLPTLSAEQAPDITRTAREYGRTYT PHDPNAERHHRERELNRTEEHPNTDLVRGDDFIKVTAGRCWCRIL >gi|294971087|gb|ADNU01000047.1| GENE 50 50598 - 52010 706 470 aa, chain - ## HITS:1 COG:BS_yhjG KEGG:ns NR:ns ## COG: BS_yhjG COG0654 # Protein_GI_number: 16078114 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Bacillus subtilis # 8 385 5 376 499 150 31.0 5e-36 MRRQQDSFDVAIVGGGPVGMLMAAELSLQDLEVVLFEPRLSVDRRPRAGTIHVRSLSHLV RRGYISLTDPRLLRKRSEQKNVAGFQLAGGIPLQLSAPATEPFPLASIPQATLESAFEQR ARQQGAEVLRGTRVTELRGNKDSITVEFEHSNKTQLTINASYVVGADGARSLVAKYGDFP TVETPPTMQAMSALAQTNDPLIPPGWNPTQHGWTMHNPGFEAPGRVIGMDFSGPVMNRTS PTEAEYRDLIKRVLGREPELSDISHITRFSDFSRYRLMMRSKRLILVGDAAHIHYPLGGQ GLNTGIQDAFTLSWRLALVIREELPEKVLNEWSKARAKVASKVVANTQIQSRLMDPRNKS LRESFAELMELPNFHEAISKLVSGQFQDGFVNDRLIRPFDPSLRETSLSMELAEGRIVEL RTTPIPIKNDRPSLKKKVVAGSFYPPLESDVVLIQPDGYAVPQTDHALYQ >gi|294971087|gb|ADNU01000047.1| GENE 51 52089 - 53405 844 438 aa, chain + ## HITS:1 COG:mlr2785 KEGG:ns NR:ns ## COG: mlr2785 COG0477 # Protein_GI_number: 13472476 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 24 389 5 417 496 165 29.0 2e-40 MKRVTSEGRVETDTSPSRWTLPIVLVAQFITPMSISGTGIALPQISTDLGSNTTALQWVV NGFNVAFALGVLGWGPVSDRIGYRMTFAIGSALFSVSSLISTASPSLLLLDFMRVIAGFG AAAVLTGASSILSNAYEGSARGRAFALFGTINGLGLTLGPTISGMLVSGFGWRGVFAVHG AILALVTLNTRILPVAADVTQVTNRTKTPLLDLSILKNREFLAMCLVPVAGSIGFVTMLT YLPSAFSGIKGIGAGKAGLIMLAMTIPVVAAPVLVAKLVEKVSWITVGFVVYSSLICLIV GDLGLVLLTPEGSTGLVIFPMILLGLGFGLPIGLVDGHALEVVPPERTGTAAGVLNFFRV GSEALFVAGYAVILSMQIRQQLSGEAATSTAAGQPGYPDVYADAFGTTALTLTLLVSLVT VSVLLARRSSSPQQNGKE >gi|294971087|gb|ADNU01000047.1| GENE 52 53412 - 53522 57 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTTNHSLEQAFDVRDVSGLSHILMTTPMPSKLPSV >gi|294971087|gb|ADNU01000047.1| GENE 53 54134 - 54454 131 106 aa, chain + ## HITS:1 COG:Cgl2985 KEGG:ns NR:ns ## COG: Cgl2985 COG0640 # Protein_GI_number: 19554235 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 100 1 98 112 82 43.0 2e-16 MADQDGHPSVDEFDLSKILHALSDTNRRKVIVKLAAQPDGTEQFCSEFGTPWAPSTRTHH FKVLRNAGLVWQRDVGNGRMTRLRRADLEKAFPGLLDQIVISSGNG >gi|294971087|gb|ADNU01000047.1| GENE 54 54528 - 54788 216 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSTIMNAENSGSRKRNPRTRGELSITLTGTGVAYNLQEPAAPGEDYVAKLIAKPGDGEDA KYSEWKAPAPDLTDNDAEVPQLAYFK >gi|294971087|gb|ADNU01000047.1| GENE 55 54685 - 55098 294 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396051|ref|ZP_06806235.1| ## NR: gi|295396051|ref|ZP_06806235.1| OmpA/MotB family protein [Brevibacterium mcbrellneri ATCC 49030] OmpA/MotB family protein [Brevibacterium mcbrellneri ATCC 49030] # 1 137 1 137 137 282 100.0 6e-75 MNFGIDPATGEQQWALNATPNLYSYNGYAPDPLGRYLYMFWDLRGRAHVSRIDITTGDMT NDAAPGLSPDYLWPLDYPAFIAVGINEFVIINQDVAARARTLEYVDNYERGELRVQKEKS QNPWGTQHHADRHRSCV >gi|294971087|gb|ADNU01000047.1| GENE 56 55519 - 56016 190 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 12 159 14 162 179 77 36 1e-13 MSQVVARLGKPHGIRGEMTVEVRTDDPDERFTPGATFGTDPDIGTLTLTRARWHRDRLML TFDEVPDRNRAEEIRNTLITVDVSETDDEDAWYIDDLVGAEVVHSGSVIGTVSAVTPGAA QDLIHVELADSGREVMIPFVEEIVPVVDLDNNRVEIDPPAGLLDM >gi|294971087|gb|ADNU01000047.1| GENE 57 56018 - 56833 699 271 aa, chain + ## HITS:1 COG:Cgl2001 KEGG:ns NR:ns ## COG: Cgl2001 COG0336 # Protein_GI_number: 19553251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Corynebacterium glutamicum # 1 256 15 288 292 273 53.0 3e-73 MRIDVFSIFPEYLTPLQLSLIGKAQVDGLLQVNVHDLRDWTYDRHRTVDDTPYGGGAGMV MKPEPWGEALDSVLNTRPEPREGEGQNQVGDTSATVIVPSPAGTPFTQAHARALAEEDHL VFACGRYEGIDQRVIDWAGEQARVQMFSIGDYVLNGGEVATMVMVEAIARLIPGVIGNPG SLDEESYEDGLLEYPVYTKPAQWRGHEVPPILLSGNHGAIARWRRDQRLERTLRVRPDLI EQLSPDDLDAHDLEVVRKAREEREANDGRDA >gi|294971087|gb|ADNU01000047.1| GENE 58 57021 - 57362 466 113 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227995322|ref|ZP_04042372.1| LSU ribosomal protein L19P [Kytococcus sedentarius DSM 20547] # 1 113 1 113 120 184 74 1e-45 MQKLDALDSKSMKSDLPEFRAGDTVNVHVRVVEGNRERIQVFKGVVIRRQGHGVSETFTV RKISFGVAVERVFPIHSPVVDKIEVLSRGIVRRAKLYYMRDLRGKAARIREKR >gi|294971087|gb|ADNU01000047.1| GENE 59 57374 - 58066 497 230 aa, chain + ## HITS:1 COG:BS_sipS KEGG:ns NR:ns ## COG: BS_sipS COG0681 # Protein_GI_number: 16079388 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 19 200 16 158 184 90 33.0 2e-18 MTQTTTGVPLRRRPWFLLSAVVVAALVLAGLVRGLVVQTFTVPSESMEPTISVDQRIAVW RPDALTGSIGRGDIVVIDGRGSFVSGQNSSLGQKVGSWFGIGPRDVFYVKRVIGVAGDRV KCCNDDGKLLVNGEPLDEPYLAGTVGGGTESEPGDGGTQAARASDVSRASDVDFDVEVPP DRLWLMGDNRANSTDSRNLLSRPGGGMIRVSDAVGVVIGHGSSIDRTEEG >gi|294971087|gb|ADNU01000047.1| GENE 60 58078 - 58800 612 240 aa, chain + ## HITS:1 COG:ML1612 KEGG:ns NR:ns ## COG: ML1612 COG0681 # Protein_GI_number: 15827848 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Mycobacterium leprae # 30 227 51 280 289 112 35.0 5e-25 MEDTAEEQHEPKKSKKAKKDSRTATQKFLASLREIAIIVVIALIVSTALKAWVVRSFYIP SASMEDTLQIDDRIMVNQLPFAHPKRGSIVVFNDPGGWLPPGTAEEYKPNPFLEFVGLAP SNAGQQLIKRVIGVGGDHVECCDDQGRIMVNGVAIDETYIKPGAPPSEVEFSVDVPQGHY WVMGDNRSNSADSRFNGDSEGGPFVPEDEVVGTVFVISWPTNRFSWVTAPDTFDKVPDPS >gi|294971087|gb|ADNU01000047.1| GENE 61 58797 - 59492 314 231 aa, chain + ## HITS:1 COG:jhp1243 KEGG:ns NR:ns ## COG: jhp1243 COG0164 # Protein_GI_number: 15612308 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Helicobacter pylori J99 # 31 229 4 192 209 106 34.0 4e-23 MTNSPAPRGRGTPRQGLSDVSDERALLDAGVTSVVGMDEVGRGCVAGPVGVGAVWCDLEA LCAGGFPAGLRDSKKLTPRPRSLAAERVRATWEHAVVAYASPQEIDAMGISAALSLAGRR ALAQLPAADLVMLDGKFNWLGTDPGLLGGDVSHVEVPPVRMYVGGDDQRIPIAAASLIAK VDRDAVMSSLDREHHGYGWASNVGYPSPAHKQAIADLGVTPWHRKSFRLGK >gi|294971087|gb|ADNU01000047.1| GENE 62 59537 - 59851 308 104 aa, chain + ## HITS:1 COG:no KEGG:RSal33209_1089 NR:ns ## KEGG: RSal33209_1089 # Name: not_defined # Def: hypothetical protein # Organism: R.salmoninarum # Pathway: not_defined # 1 96 1 96 112 144 79.0 1e-33 MSTEDLEEYEAELELALYREYRDVVGLFTYVVETERRFYLANQVDLKAHQSDGEVYFELT LRDAWVWDTWRSARFVKTVHVLTFKDVNIEEIAKSDFEPPRGIR >gi|294971087|gb|ADNU01000047.1| GENE 63 59997 - 61268 1513 423 aa, chain + ## HITS:1 COG:CPn0528 KEGG:ns NR:ns ## COG: CPn0528 COG1301 # Protein_GI_number: 15618439 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Chlamydophila pneumoniae CWL029 # 17 398 7 394 414 123 25.0 6e-28 MTAQSGGWKNYRFPILILTGVVVGAIVGLILGESATVLKPFGTVFINMMFTLVVPMVFFS IASAVANMNSATRLGRIMGSMMAVFIATGIVASSVMLLALGIFRPLDNVQVNMDELPEEQ EELSIGDQIVGAFTVEDFSDVISTEHMLPLIVFAVLIGLSANLVKEKGAVFRSFLDSGNE VFMKMTGLVMYYAPIGLGAYFAALIGELGSQLVGGYVRAFAVYYPVAIVYFFAAFTLYSW LAGGVGGMRRMWANILAPAAVSLGTGSSVATIPSNLRAAKRIGVPDDIRETIIPIGATIH MEGSCLSAILKIAFLFAVFERDIFTPQALAIAVLIALLSGMVMSGIPSGGFLGELMIVSM YGFPPAALPIISVIGTVVDPPATTINAAGDTVSSMMVARVVDGKDWMKKEAQASDGADLG ESA >gi|294971087|gb|ADNU01000047.1| GENE 64 61416 - 61769 248 117 aa, chain + ## HITS:1 COG:MT2966 KEGG:ns NR:ns ## COG: MT2966 COG0792 # Protein_GI_number: 15842441 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis CDC1551 # 1 114 20 138 141 87 49.0 7e-18 MKRNQTLGALGEQFATDHLKGLGWHILDRNWRCRRGEIDIIARDGTSVVFVEVKTRNTVR AGHPLEHVSYFKMRTLRGLAIAWLSAQPEWVPEFRVDVIGIVWNSGQPVLTHVRNAQ >gi|294971087|gb|ADNU01000047.1| GENE 65 61766 - 63295 659 509 aa, chain + ## HITS:1 COG:Rv2897c KEGG:ns NR:ns ## COG: Rv2897c COG0606 # Protein_GI_number: 15610034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Mycobacterium tuberculosis H37Rv # 3 505 1 497 503 367 44.0 1e-101 MSLHVGRSTAVALWGTQGTPIAIEASINSGLPGIDVVGLPDTSVNEAKKRVRASVANLGF AMSAQRITVNLSPASVKKYGTNFDLGIAVAILQAERRIPQETDRVVFCAELGLDSRLHPV NGVVPTLIAAKQAGLTTVVVSQANEKEARMLTGLNVIAANSLGEVVNHFGGDVQVPQLPP VERHATKGRKPLSVNDLSEVQGQDEARYALEVAAAGGHHILMIGSPGAGKTMLAGCLPGL LPALSEEQAIETFSLRSIDGTLNPEHGLDTTPPFEAPHHSTTSAAMVGGSKPTSIGVFSR AHRGVLFMDEAPEFHRDVLEALRQPLENSRCEIGRAWGTVTLPAEFQLVLAANPCPCGSA VGDGKACRCTPIAKRRYRDRLSGPLLDRIDIQMDMLPLSAAHVHAREVRESTADVAVRVA EARRIQASRYAGQVWSTNARAPGSWLRALFAFTPQETAPLDAAMDRGDLTMRGYDRIVRI ATTVADLGGRERPTGDDLAHAYTLRTREG Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:52:28 2011 Seq name: gi|294971004|gb|ADNU01000048.1| Brevibacterium mcbrellneri ATCC 49030 contig00053, whole genome shotgun sequence Length of sequence - 85492 bp Number of predicted genes - 81, with homology - 79 Number of transcription units - 25, operones - 10 average op.length - 6.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 4/0.200 + CDS 1 - 405 322 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 2 1 Op 2 1/0.200 + CDS 402 - 1181 616 ## COG1385 Uncharacterized protein conserved in bacteria 3 1 Op 3 17/0.000 + CDS 1240 - 2178 809 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 4 1 Op 4 13/0.000 + CDS 2175 - 2654 360 ## COG0319 Predicted metal-dependent hydrolase 5 1 Op 5 1/0.200 + CDS 2658 - 3935 984 ## COG1253 Hemolysins and related proteins containing CBS domains 6 1 Op 6 . + CDS 3919 - 4854 730 ## COG1159 GTPase 7 1 Op 7 . + CDS 4876 - 5883 820 ## COG1485 Predicted ATPase 8 1 Op 8 . + CDS 5880 - 6839 643 ## COG2326 Uncharacterized conserved protein 9 2 Tu 1 . - CDS 6792 - 7238 392 ## Sare_1561 hypothetical protein + TRNA 7379 - 7451 88.7 # Gly GCC 0 0 + TRNA 7495 - 7568 64.8 # Cys GCA 0 0 + TRNA 7572 - 7643 79.5 # Val CAC 0 0 + TRNA 7691 - 7762 80.9 # Val GAC 0 0 + Prom 7689 - 7748 74.4 10 3 Op 1 . + CDS 7904 - 8941 936 ## Celf_1804 hypothetical protein + Prom 8954 - 9013 1.8 11 3 Op 2 4/0.200 + CDS 9070 - 11073 2247 ## COG0441 Threonyl-tRNA synthetase 12 3 Op 3 3/0.200 + CDS 11077 - 11634 494 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 13 3 Op 4 1/0.200 + CDS 11684 - 12301 555 ## COG0558 Phosphatidylglycerophosphate synthase 14 3 Op 5 7/0.000 + CDS 12331 - 12777 547 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 15 3 Op 6 8/0.000 + CDS 12835 - 13596 952 ## COG0217 Uncharacterized conserved protein 16 3 Op 7 14/0.000 + CDS 13596 - 14192 552 ## COG0817 Holliday junction resolvasome, endonuclease subunit 17 3 Op 8 29/0.000 + CDS 14266 - 14850 512 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 18 3 Op 9 . + CDS 14847 - 15917 680 ## COG2255 Holliday junction resolvasome, helicase subunit + Prom 15933 - 15992 2.3 19 4 Op 1 . + CDS 16019 - 16474 489 ## Achl_2030 preprotein translocase subunit YajC 20 4 Op 2 31/0.000 + CDS 16480 - 18480 1873 ## COG0342 Preprotein translocase subunit SecD 21 4 Op 3 . + CDS 18480 - 19481 1096 ## COG0341 Preprotein translocase subunit SecF 22 4 Op 4 . + CDS 19502 - 21790 1876 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 23 5 Op 1 . - CDS 21802 - 22371 272 ## gi|295396087|ref|ZP_06806270.1| hypothetical protein HMPREF0183_1768 24 5 Op 2 . - CDS 22432 - 23790 1669 ## Arth_2295 hypothetical protein 25 6 Op 1 4/0.200 + CDS 23912 - 24559 559 ## COG0491 Zn-dependent hydrolases, including glyoxylases 26 6 Op 2 . + CDS 24637 - 25971 1202 ## COG0124 Histidyl-tRNA synthetase + Term 25978 - 26010 1.5 27 7 Tu 1 . - CDS 26002 - 26364 443 ## COG0640 Predicted transcriptional regulators 28 8 Op 1 . + CDS 26419 - 28191 1874 ## COG0173 Aspartyl-tRNA synthetase 29 8 Op 2 . + CDS 28194 - 29576 1082 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + Term 29696 - 29734 1.7 30 8 Op 3 . + CDS 29825 - 30451 812 ## PROTEIN SUPPORTED gi|116670828|ref|YP_831761.1| 30S ribosomal protein S4 + Term 30461 - 30508 15.5 31 9 Tu 1 . - CDS 30443 - 30670 70 ## 32 10 Tu 1 . + CDS 30573 - 31205 694 ## COG1230 Co/Zn/Cd efflux system component + Term 31275 - 31310 -0.8 + Prom 31273 - 31332 5.5 33 11 Tu 1 . + CDS 31354 - 33096 902 ## Bfae_29150 hypothetical protein - Term 32939 - 32979 0.4 34 12 Tu 1 . - CDS 33150 - 34508 1036 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 35 13 Op 1 16/0.000 + CDS 34579 - 35478 1122 ## COG0214 Pyridoxine biosynthesis enzyme 36 13 Op 2 . + CDS 35475 - 35867 95 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 37 13 Op 3 . + CDS 35789 - 35977 125 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 38 14 Tu 1 . - CDS 35974 - 37185 1363 ## COG5505 Predicted integral membrane protein 39 15 Op 1 36/0.000 - CDS 37318 - 37959 210 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 40 15 Op 2 10/0.000 - CDS 37968 - 39137 966 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 41 15 Op 3 . - CDS 39197 - 40483 1312 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Prom 40788 - 40847 4.8 42 16 Tu 1 . + CDS 40873 - 41355 365 ## KRH_01810 hypothetical protein 43 17 Op 1 . - CDS 41946 - 42197 118 ## Meso_0545 ATP-dependent OLD family endonuclease 44 17 Op 2 . - CDS 42197 - 44329 1972 ## COG4930 Predicted ATP-dependent Lon-type protease 45 17 Op 3 . - CDS 44344 - 46839 2117 ## RER_28940 hypothetical protein 46 17 Op 4 . - CDS 46836 - 47063 232 ## gi|295396109|ref|ZP_06806292.1| conserved hypothetical protein 47 17 Op 5 . - CDS 47056 - 50538 2530 ## COG1002 Type II restriction enzyme, methylase subunits 48 17 Op 6 . - CDS 50551 - 54087 2748 ## RER_28960 hypothetical protein 49 17 Op 7 . - CDS 54093 - 54692 527 ## RER_28970 hypothetical protein 50 17 Op 8 . - CDS 54689 - 55309 401 ## RER_28980 hypothetical protein 51 18 Tu 1 . - CDS 55731 - 56066 153 ## Asphe3_22310 phospholipase/carboxylesterase 52 19 Tu 1 . + CDS 56438 - 56785 158 ## 53 20 Tu 1 . - CDS 56768 - 57178 396 ## Asphe3_22340 hypothetical protein 54 21 Tu 1 . + CDS 57397 - 57894 214 ## Asphe3_22350 hypothetical protein 55 22 Tu 1 . - CDS 57993 - 59090 778 ## Mesci_5896 hypothetical protein 56 23 Tu 1 . + CDS 59531 - 59974 491 ## gi|295396119|ref|ZP_06806302.1| conserved hypothetical protein 57 24 Tu 1 . - CDS 59949 - 60761 453 ## COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold 58 25 Op 1 9/0.000 + CDS 60941 - 63595 2869 ## COG0013 Alanyl-tRNA synthetase 59 25 Op 2 4/0.200 + CDS 63592 - 64035 362 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 60 25 Op 3 4/0.200 + CDS 64025 - 65152 1285 ## COG1559 Predicted periplasmic solute-binding protein 61 25 Op 4 . + CDS 65145 - 65996 723 ## COG0169 Shikimate 5-dehydrogenase 62 25 Op 5 . + CDS 65978 - 66730 972 ## gi|295396126|ref|ZP_06806309.1| possible H+/gluconate symporter and related permease 63 25 Op 6 7/0.000 + CDS 66741 - 67928 1182 ## COG0082 Chorismate synthase 64 25 Op 7 20/0.000 + CDS 67925 - 68548 484 ## COG0703 Shikimate kinase 65 25 Op 8 . + CDS 68541 - 69635 1130 ## COG0337 3-dehydroquinate synthetase 66 25 Op 9 6/0.000 + CDS 69692 - 70255 650 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 67 25 Op 10 . + CDS 70252 - 70656 393 ## COG0781 Transcription termination factor 68 25 Op 11 8/0.000 + CDS 70716 - 71258 497 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 69 25 Op 12 15/0.000 + CDS 71258 - 72226 974 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 70 25 Op 13 . + CDS 72229 - 73536 1258 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 71 25 Op 14 . + CDS 73524 - 74009 405 ## KRH_13340 hypothetical protein 72 25 Op 15 24/0.000 + CDS 74006 - 75136 975 ## COG0505 Carbamoylphosphate synthase small subunit 73 25 Op 16 3/0.200 + CDS 75146 - 78415 3151 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 74 25 Op 17 . + CDS 78412 - 79236 605 ## COG0284 Orotidine-5'-phosphate decarboxylase 75 25 Op 18 . + CDS 79273 - 79590 300 ## Jden_1319 hypothetical protein 76 25 Op 19 25/0.000 + CDS 79587 - 80159 486 ## COG0194 Guanylate kinase 77 25 Op 20 10/0.000 + CDS 80203 - 80532 459 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 78 25 Op 21 4/0.200 + CDS 80533 - 81774 995 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 79 25 Op 22 2/0.200 + CDS 81785 - 82969 1156 ## COG0192 S-adenosylmethionine synthetase 80 25 Op 23 4/0.200 + CDS 82987 - 85008 1103 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 81 25 Op 24 . + CDS 85010 - 85490 304 ## COG0223 Methionyl-tRNA formyltransferase Predicted protein(s) >gi|294971004|gb|ADNU01000048.1| GENE 1 1 - 405 322 134 aa, chain + ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 1 132 242 375 378 105 46.0 2e-23 AGDLHLEVAIREHPVFTRDGDDLRATVTIPMTAAALGTTISLETFDGERELEIAPGTQVG TTETLTGLGVGRLRRSSRGDLLVTVNVEVPSKLDAKQRELLEQLAQMRGETNPDVKLGNH HRGPFSRLRDRFNL >gi|294971004|gb|ADNU01000048.1| GENE 2 402 - 1181 616 259 aa, chain + ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 258 1 241 241 127 35.0 2e-29 MTLPVFLTQTPLAGATGTITVGPEVAGHAVRVRRMGAGEELELIDGTGMRLRGTIQEGTP ESLTLSVTEVTEEPQQRPRLALVQALSKNDRDIQAIEAATEVGVDAVIPWAAQRSIADWP AKKAHKMAAKWSNVLTAATLQARRTRVPELGELIRGTAVTQLVTPTSRVIVLDETESTGL TEAVNDLGQGNTTQDNISQGDIDQIVVIVGPEGGITPAEIDALVSAGARTAVLGPTILRA STAGPVALAIVQTLLGRWK >gi|294971004|gb|ADNU01000048.1| GENE 3 1240 - 2178 809 312 aa, chain + ## HITS:1 COG:MT2437 KEGG:ns NR:ns ## COG: MT2437 COG1702 # Protein_GI_number: 15841880 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 6 311 29 337 352 339 60.0 5e-93 MQLTIPDSIDPVALLGPADSNLKTLERLEPSVDILARDRGLRIRGPQANVDAVVKTVGQL KRLVAAGQQVTSGTVEQVHGMEHAEPAQVLTDNVVSHRGRTVRPKTFGQHEYVNAIRKHT ITFGIGPAGTGKTYLAMAMAVNALSRGDVKRIILTRPAVEAGEKLGFLPGTLDEKIDPYV RPLYDALHDMVEPERIKGLLESGIIEVAPLAYMRGRTLNDAFIILDEAQNTTPEQMKMFL TRLGFQSRMVVTGDISQIDLPGSTPSGLRIVANILKDVDDICFFNLTSKDVVRHPLVSKI VDAYDSQPGGGA >gi|294971004|gb|ADNU01000048.1| GENE 4 2175 - 2654 360 159 aa, chain + ## HITS:1 COG:ML0628 KEGG:ns NR:ns ## COG: ML0628 COG0319 # Protein_GI_number: 15827258 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Mycobacterium leprae # 1 145 1 151 178 141 52.0 6e-34 MSIELGNETELPVDLERVQECARFALDTVNVHPAVELSIRFISDDVMSELHETWMGLPGT TDVMSFPMDELKPGHDEPGMLGDIVISPTVAAEQAAAAGHSMSDEIYLLTVHGILHLLGY DHGEPDQKSEMFALQRKLLLMWFAQIEPGRTHVPEPTED >gi|294971004|gb|ADNU01000048.1| GENE 5 2658 - 3935 984 425 aa, chain + ## HITS:1 COG:Rv2366c KEGG:ns NR:ns ## COG: Rv2366c COG1253 # Protein_GI_number: 15609503 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 10 423 10 423 435 284 40.0 3e-76 MDVFIYFAVAVVCVLLASILAAADSAFSVVSHHEVHDAAEDGRRGGERALKVVRDLPTHI NVITFVRQLFEANAVVFIVWGFVEVLGANWKSMVLAALMGSVAIFVIAGVSPRTIGRRRS LPVTLALAGPVAGLRTMLGPLARVLVWLGNMLTPDRVYRDGPFVTQEQLRDLVERASAGN IIDDDERDMIGRIFNLSDTRTYKVMVPRTDVVTIDANDTLGESLSLFFRSGFSRIPVVNG DIDEMTGVLYLKDVSRKLYMDPDAADTKAATLARKVPYVPETKPVGDLLREMQHEATHVA VVIDEYGGTAGIITIEDIVEEIVGEIADEYDSEDEEIVEIEPGVYRVDTRMLIDDLAEFF DVRIDEDDVSSVGGLLTTLIGKVPIEGSRAECAGLSIEAEPGQGRRHRVHHVIVKRIEEP DEPVS >gi|294971004|gb|ADNU01000048.1| GENE 6 3919 - 4854 730 311 aa, chain + ## HITS:1 COG:ML0631 KEGG:ns NR:ns ## COG: ML0631 COG1159 # Protein_GI_number: 15827260 # Func_class: R General function prediction only # Function: GTPase # Organism: Mycobacterium leprae # 9 308 4 302 302 363 62.0 1e-100 MSLFREVPSDFRAGFACFVGRPNTGKSTLTNALVGTKVAITSNKPQTTRHTIRGVVHRDN HQLIVVDTPGLHRPRTLLGSRLNDLVASTLAEVDVIGFCLPANEKIGPGDRYIAEQLEMI ARKTPVVAIVTKTDTVPKGQVVEALTAVNELGDFAEVVPVSAVDGFQVDTVDQVLAKYLP ESPPLYPDGDITDEPESVLIAELVREAALEGIREELPHSLAVQVEEMIQREDRPEDKPLV DVHVNLYVERDSQKAIIIGRKGARLKQIGSQARQGIEALLGTPVFLSLHVKVAKDWQRDP KALGRLGFDFS >gi|294971004|gb|ADNU01000048.1| GENE 7 4876 - 5883 820 335 aa, chain + ## HITS:1 COG:MT2744 KEGG:ns NR:ns ## COG: MT2744 COG1485 # Protein_GI_number: 15842208 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 5 332 26 362 369 330 50.0 3e-90 MTSVHLVDRSPSISPHELIAQLVPPPHFEDVSFESYKPDPTQPSQAKARDALQAFTEKST KKSIFKKMLGKSDSSAKGLYLDGGYGVGKTHLLASAWHRSEKPAAFGTFVEYTNLIGALG FKQAAADLSQCKLVCVDEFELDDPGDTVMMSRLMRELTDAGVKIVATSNTLPGALGQGRF AAQDFLREIQALADQFEVLSIDGDDYRHRGIPNPPEPVSNDELQTVAQDFAGTIACDEFD QLMEHLPRVHPSRYRLLLDDIDAVAWQDVHTVENESVALRFVALVDRMYDRGVAIHNSGV RLDKVFTEDMLGGGYRKKYMRCLSRLTALATGEER >gi|294971004|gb|ADNU01000048.1| GENE 8 5880 - 6839 643 319 aa, chain + ## HITS:1 COG:DR0132 KEGG:ns NR:ns ## COG: DR0132 COG2326 # Protein_GI_number: 15805171 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 57 297 26 259 266 198 43.0 1e-50 MKFNNEPIVEPAHSVEPAPSPKLADEVDQASPAELVQVLRWKRGASFDSVDPTAKPGFSG NKEQGRTARTADSEVLSDLQERLYANAKTGVERSLLVVIQGRDTAGKGGIVNHVAGVLSP HGVSIASFGVPTEEEKQHHFLWRIKKKLPEHGQIGVFDRSHYEDILAVRMHNLAPESVWQ GRYEEIRQFEQGLVQSGTAVVKIMLTVSQEEQYQRLSKRLSRENKLWKYSPGDVDDRLRW YGYSQAFSDVMDETDTNDTPWYVVPADRKWYARWAVTRIVIHHLQGMNVAWPPPAFDVEE ERARLEEARYIKPAEPQDT >gi|294971004|gb|ADNU01000048.1| GENE 9 6792 - 7238 392 148 aa, chain - ## HITS:1 COG:no KEGG:Sare_1561 NR:ns ## KEGG: Sare_1561 # Name: not_defined # Def: hypothetical protein # Organism: S.arenicola # Pathway: not_defined # 39 144 69 175 186 88 44.0 1e-16 MPKNREEKPESPYEARPRTHRPRWIRASHLSYLRWRQSIAAHPTTEAFYKWTVGIVGGIV IVVGLVLVPLPGPGWLIVLFGVAIIASEFHWAHCLLMWARKKLHAWTVFIKRSHWSVGAA IGLVTFLCVTFAVLCVLWFSGFDITRFF >gi|294971004|gb|ADNU01000048.1| GENE 10 7904 - 8941 936 345 aa, chain + ## HITS:1 COG:no KEGG:Celf_1804 NR:ns ## KEGG: Celf_1804 # Name: not_defined # Def: hypothetical protein # Organism: C.fimi # Pathway: not_defined # 19 165 7 142 156 70 37.0 1e-10 MSNPYGGSSYPGGGNNTPPSAPGSQPPSASSPQAPQYGGGSYGSGSYGSSSAGQSAPSAP GAPGAPSSPGGPSYPGGPLGGSGSSSEKNGVGLWAMILGLAGILFGLLTGLPGAIMGMIG LKNVNNGEADNKGQALTGLIAGIITSIGGLIGGIIVVVLIATGALFSGGSGTTEPTSPQT QGGQEPGGNGGQNPGGQEPGGNGGQEPGGSNGGGSGGGNSSGKSPEIENGVNLGVRSKQT TAGKYTIPTEVQNKEYMFIEVVITNNSDSEYSLPYPIVSAELNGKQLERVTDVENQKKGA LDWPSSLAPGEEAVYQTGFVASGADAKNVKVTVSLNGKKFDFTNG >gi|294971004|gb|ADNU01000048.1| GENE 11 9070 - 11073 2247 667 aa, chain + ## HITS:1 COG:Cgl1631 KEGG:ns NR:ns ## COG: Cgl1631 COG0441 # Protein_GI_number: 19552881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 30 657 40 665 686 783 61.0 0 MADIVTLDGKNIDFEDGMTATEFFADRKDVIAIRLNGAPADLDRELHAGDTVEPILISEP DGLDILRHSCAHVVAQAVQELYPGSKLGIGPYITDGFYYDFQVEEPFTPEDLKAIEKKAQ RIVKEGQTFHRVVVDEDEAIRREANEPFKLELIQDKGKGAEGASVEVGGSELTVYENRNR KGEVVWQDLCRGPHLPSTKLIGNGFAVTRASAAYWRGDQDNASLQRVYGTAWASKDDLKA YQVRIAEAERRDHRRLGAELDLFSFPDELGSGLPVFHPKGGVIKREMEDYVRARHIEEGF EYVGTPHISKEALYYTSGHLPYYGENMFPAMQVDEQRDENGEIIKQGQPYRLKAMNCPMH NLIYRSRGRSYRDLPLRLFEFGTVYRNEASGVVHGLTRVRALTQDDSHSYVAVEDAASEI KHLLDFMLSLLRDFGLDDFYLELSTRDAVGKKANKFIGSDEQWDEATRTLEEVARATGLE LVPDPGGAAFYGPKISVQARDAIGRTWQMSTVQLDFNQPERFDLEYQAADGSRKRPVMIH SAKFGSIERFLGVLTEHYAGAFPVWLSPVQAIMVPVADEFLPYVEEIAQKLKAHGIRVEI DDSTDRFPKKIRNASKSKVPYTLIAGGEDRDAHAVSFRFRDGSQENGVPVDQAVERIVDA IKTKAQV >gi|294971004|gb|ADNU01000048.1| GENE 12 11077 - 11634 494 185 aa, chain + ## HITS:1 COG:ML0455 KEGG:ns NR:ns ## COG: ML0455 COG0537 # Protein_GI_number: 15827146 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Mycobacterium leprae # 13 180 24 191 206 189 51.0 4e-48 MIPEPEAAAGFPGEPDGLQRLWTPHRMVYVGGETKPKDGSESECPFCVAPTKSDEDGLLV ARGKTVFAVLNLYPYNPGHLLICPYRHVPSYTDLTEEETLEFAQFSQEAMRMIRRVSKPD GFNLGMNQGAVAGAGIAAHLHQHVVPRWSGDANFFPVIAQTKALPLVHGQVREMYSEAWS APDAS >gi|294971004|gb|ADNU01000048.1| GENE 13 11684 - 12301 555 205 aa, chain + ## HITS:1 COG:ML0454 KEGG:ns NR:ns ## COG: ML0454 COG0558 # Protein_GI_number: 15827145 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium leprae # 5 196 7 200 239 150 44.0 2e-36 MLNAIARAAFTKLFTPLAQLLIKLGIGPDAVTVIGTLGVCVGALVLYPMGQLFWGTVVIT FFVFGDMLDGIMARLLDRNSTWGAFLDSTMDRLADSAVFVGLALWYFLGADDPLTALLAL ACLVMGSIVSYVRARGEGLGVQASGGIAERADRLLVTLVVTGLVGLGLPDSVLTIALAIL VVLCCITIAQRMSNVYVQLRSKESD >gi|294971004|gb|ADNU01000048.1| GENE 14 12331 - 12777 547 148 aa, chain + ## HITS:1 COG:Rv2609c_2 KEGG:ns NR:ns ## COG: Rv2609c_2 COG0494 # Protein_GI_number: 15609746 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis H37Rv # 1 132 7 146 172 73 37.0 1e-13 MNTEGAVFLLKAKDLGDSSKTWWMTCGGGEEMGELPAQTAARELAEETGIECEPTELVGP LAKRRAVMEFTDHTLHQDEVFFGLVDDSDVDFEEALWTDVEKASIVGAKWWTREELETTS ETVYPRQLIELMDVVSSGQIPETPLVLD >gi|294971004|gb|ADNU01000048.1| GENE 15 12835 - 13596 952 253 aa, chain + ## HITS:1 COG:MT2678 KEGG:ns NR:ns ## COG: MT2678 COG0217 # Protein_GI_number: 15842143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 251 1 251 251 328 72.0 7e-90 MAGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEVAARNGGADVAGNPTLYDAIQKAKKSS VPNDNIERAVKRGAGLDGGGVDYQTIMYEGYAPGGVALLIECLTDNRNRAASEVRVAVTR NNGSMADPGSVSYNFNRKGVVAVPVEGTSEDAILEATLDAGAEEVKDQGDILEVISEATD LVAVRTALQEADIDYDSAEARFVPNLEVQLDAETAKKVFTLIDALEDLDDVQNVFTNADV TDEVMAQLEAEEE >gi|294971004|gb|ADNU01000048.1| GENE 16 13596 - 14192 552 198 aa, chain + ## HITS:1 COG:Cgl1622 KEGG:ns NR:ns ## COG: Cgl1622 COG0817 # Protein_GI_number: 19552872 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Corynebacterium glutamicum # 4 180 1 177 213 163 52.0 2e-40 MRILGVDPGLTRLGLGVIDAGRARQARMVAVDVIRTPSQDSSDVRLGRIADAFDTWLDNY RPDVVSIERIFARNDVSTIMGTAQASGLTMGLAARRGIPVAMHTPSEVKAAVTGNGRADK KQVTHMVTRILKLDSPPKPADAADALALAICHLWRGASSALSTPGSTKDVVDRQRAGRQG DNLTPAQRAWAQAIRDAR >gi|294971004|gb|ADNU01000048.1| GENE 17 14266 - 14850 512 194 aa, chain + ## HITS:1 COG:Cgl1621 KEGG:ns NR:ns ## COG: Cgl1621 COG0632 # Protein_GI_number: 19552871 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Corynebacterium glutamicum # 1 192 1 205 206 106 40.0 2e-23 MIRYLEGTVHTVSANSLTVVTSGVGREVFVTPAVAGRVRTGSEVALHTELIVREDALTLY GFDTPSELKLFSTLLGANGVGPKLALAILSVLSPDQVYGAISDNTPKVLTAVPGVGPKVA AKLIVDLQGKVPATSAVPSSGAGPASAEVVQALVGLGWKEATAIKAVEAVAPEMGQASVA DMLKAALRELGGSR >gi|294971004|gb|ADNU01000048.1| GENE 18 14847 - 15917 680 356 aa, chain + ## HITS:1 COG:MT2669 KEGG:ns NR:ns ## COG: MT2669 COG2255 # Protein_GI_number: 15842132 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 36 355 21 343 344 412 69.0 1e-115 MSDKSYEVDFGASDLTGAEEERLMRSGADDAERAQEAALRPKGLAEFVGQKQVREQLSLV LDAAKAGKRTPDHVLLSGPPGLGKTTLAMIIAQEMGSHIRITSGPAVQHAGDLAAILSSL DEGEVLFIDEIHRVARAAEEMLYVAMEDFRVDVIVGKGPGATAIPLDLPPFTLVGATTRS GLLPAPLRDRFGFTGHLDFYTSQDLQRVLERSAGMLGIEADEAGLAEIARRSRGTPRIAN RLLRRVRDWAQVRGDGHIDLYASRSALNVYEVDDRGLDRLDRAVLSVLCERFNGGPVGLS TLAVSVGEEPETVEEVAEPFLVREGLMTRTPRGRIATQTGWQHIGLTPPDDPALFS >gi|294971004|gb|ADNU01000048.1| GENE 19 16019 - 16474 489 151 aa, chain + ## HITS:1 COG:no KEGG:Achl_2030 NR:ns ## KEGG: Achl_2030 # Name: not_defined # Def: preprotein translocase subunit YajC # Organism: A.chlorophenolicus # Pathway: Protein export [PATH:ach03060]; Bacterial secretion system [PATH:ach03070] # 1 100 30 132 181 74 40.0 1e-12 MEIILLVALGGLLLFFMMNTRKRQKAQQEKLSNNLRVGATVMTSFGMFGTVTDVDEDGIK VTVETTPGTNVVIHRQTIAQIEAPEGEAPAVPEADADVSSDVASDVDEPAVEESKADTAP RITDAELDAMNEAKRNAMTNDNADTNDSDKK >gi|294971004|gb|ADNU01000048.1| GENE 20 16480 - 18480 1873 666 aa, chain + ## HITS:1 COG:Rv2587c KEGG:ns NR:ns ## COG: Rv2587c COG0342 # Protein_GI_number: 15609724 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Mycobacterium tuberculosis H37Rv # 1 585 1 548 573 231 34.0 3e-60 MASIDKKPRPGRRFLALGAFIVIIFALVGAGAVWSNATWSPKLALDLEGGTSIILEPQLE DQQVTREQLQQAVAIIRQRVDSTGVSEAEISTQGDRNIVVNLPGNPDEETRNLVRSSAQL AFRRVALVGAPTPLDQQQQEDKPQEDTGPKLSEEDQKKLDELLGGQGGQSQPEQGAPQQG QPQEPANPGSSNIRPVAQPAPSEEGKEPQQGEQPEQKSEEEPSKLPEDFEPGSQDDVPRF KPEDQQSWMDSKLLEEYAKLDCTKPENRVGGDSGPRDEPMVSCDQTGEAKYILGPVELAG SHVKDASFGFESTSQGTQTNRLAVTMEFDDFGREVFGKVTSAVTGAQPPYNQFAIVLDGL VLSAPVSQSAVTDGRAQITGSFSEEEASTLANQLKNGALPISFKVQSEQQISPTLGADYL KVGLITGGIGLLLVVVYSLLQYRVLGLVTVSSLVVAGVLTWGLLLFVSWRYGYRLSLAGV AGIIIGIGMAADSFIVYFERVRDELRDGRKLLSAVEVGWDRARRTIYASKAVNMLAAVIL FILAVGSVRGFAFTLGLTVIVDVVIVVLFTHPMLQVLARTRFFGEGHPMSGMDPRQLGVK PEAYRGAMGLDLDKARKKSTGRSHKEAKRREESRTRKSGQTLAERKAAERKASSVDTKTK TTEEDA >gi|294971004|gb|ADNU01000048.1| GENE 21 18480 - 19481 1096 333 aa, chain + ## HITS:1 COG:Cgl1617 KEGG:ns NR:ns ## COG: Cgl1617 COG0341 # Protein_GI_number: 19552867 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Corynebacterium glutamicum # 9 327 24 350 403 202 36.0 1e-51 MKRFFEFGNRLHSGETSIPFVGKGKLWLSIATVLVILSLLIPVVGGFNLGIAFRGGSEFE ISNVKSNDPQPGIDATNKTVGHAEATGVPRSDTSVRIETRQLSDEEMQKVREALISAYSV DNKDVTSNFVGPLWGQDITNKMTRALVIFVVISMIVMALYFRTWKMSLAAIAGLFFVMIT TMGIYSASGFEVTPEAVIGFLTVLSFSLYDTVVVFDKIRENTTDFTKNRKQTFGELVNLG VNQTTVRSINTTVISILPIASILFIGVFMLGAGTLVDIALSLFVGTITAAASTLFVASPL YYFLRKNEPAVREQENAVLEARASKKSAEPAAV >gi|294971004|gb|ADNU01000048.1| GENE 22 19502 - 21790 1876 762 aa, chain + ## HITS:1 COG:Rv2583c KEGG:ns NR:ns ## COG: Rv2583c COG0317 # Protein_GI_number: 15609720 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Mycobacterium tuberculosis H37Rv # 34 761 64 788 790 866 59.0 0 MSQPESTSKRPRGISRLAFWTARSQNAPQVPKALGPLLSAVAENHPKADINIILKAYRVA EKAHRGQTRKSGDPYITHPVAVATILAEIGMMPVTLAAALLHDTVEDTDYGMDQCREEFG DEIALMVDGVTKLDKIQYGAAAQSETVRKMIVAMSRDIRVLVIKLADRLHNARTWKYVPA SSSERKARETLDIFAPLAHRLGMNTIKWELEDLSFQVLYPKVYSEIVRMVAERTPEREKY LATVSKELGRELTGAKIEATITGRPKHYYSIYQKMVVRGHEFADIYDLVGVRVLVETERE CYAVLGIVHAKWSPVAGRFKDYIAMPKFNMYQSLHTTVIGPTGKPVEIQIRTHEMHRRAE FGVAAHWKYKDRRKSGGAASGRMAKVGDAGEVDQVQWLRQLLDWQREVTDPDEFLDNLRY EVKSADVYVFTPKGDIITLPVNSTPVDFAYSVHTEVGHKTMGARVNGRLLPLDTQLKNGD VVEVFTSKDENAGPSRDWLAFVASPRARSKIRQWFSKERREEAVENGRDQLARAMRRHHL SAEKLMSQEALVVVANEQRLPDVTALYAAIGQGNISAAHVVDLLAKEVDSSPDDANVATL PPSNPTGKSRGHHSSSEGVRVVGADDILIKLARCCTPVPGDQITGFVTRGAGVSVHRKDC PNVASYDTERLVEVEWTNTSSGVYLVQIQVEALDRAGLLSDITRVLSETHVNILSASVAT SKARVAQSRFVFEIGDASHLDNVLNAVRQVDGVFDVYRLKST >gi|294971004|gb|ADNU01000048.1| GENE 23 21802 - 22371 272 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396087|ref|ZP_06806270.1| ## NR: gi|295396087|ref|ZP_06806270.1| hypothetical protein HMPREF0183_1768 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1768 [Brevibacterium mcbrellneri ATCC 49030] # 1 189 1 189 189 364 100.0 2e-99 MTQLFTAGEGLSHHQLVSLELDGLLTPLTQQCWVASGEPITPTVRSNALTTPPVKHVAFS HETAYWVWWGDGMSPETTSVSATKRKRVRSIHDGFHIHETLVPHGHTVKLGKNYVTSESA TLYALLFDLCEDRVPPETSVAQARDLLLRIPAEARVAFATFLRGLYRRPRLTRLRKLAHL ADPLIAHLG >gi|294971004|gb|ADNU01000048.1| GENE 24 22432 - 23790 1669 452 aa, chain - ## HITS:1 COG:no KEGG:Arth_2295 NR:ns ## KEGG: Arth_2295 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 43 451 148 556 557 322 50.0 2e-86 MSDSPAPKPRPVPRPGATPQPGTQPVAPVARDRKAELEKARAFGRVDENNTVFVKVVGGE REVGQYPDADNEQALNYFAKKYLELVESADLLAERLKAGANGETIRQAAVKQREALAEAL VVGDLNALETALSELEERAKAAHTQQQKQHEQAREEGRQARAAIVEEAESIAGTDPARVQ WKNSSKRMNELFDRWKELQASTPRLPKDQDQELWGRFSKARNSFDRHRREFFNELDKRSA EGKRIKEGIVAEAESLSNSTEWRETAAKYRKLVDKWKAAPRARRKEDDALWARFRAAQDV FFNARNAQNEALDAEYQENLKVKEELLEQARALLPIEDIEATRKKLRDIQEKWEDAGRVP RADVSRMEGGLRDVERALSDAENEEWKRTNPETKARTSGVMAQLEDALEELRKELDVARE KGDQKRIAEAEEALNTKQAWYDQLSKTAQELD >gi|294971004|gb|ADNU01000048.1| GENE 25 23912 - 24559 559 215 aa, chain + ## HITS:1 COG:Rv2581c KEGG:ns NR:ns ## COG: Rv2581c COG0491 # Protein_GI_number: 15609718 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis H37Rv # 1 215 1 219 224 138 37.0 8e-33 MFVLSSVAEFLGVNCYAVAREGASECVLFDAGLNGAPELYELLKEEGLTPTALVLTHGHP DHILGLPHFYEEFGALPTYLHADDMYRVERPAETMNPQFKAMLAPLVAQWEVPQVQRFSD GDVLQLAGLDIRIIHTPGHTEGSCVFEVTEGNESLLFTGDVLFAGSIGRVDLPGGDPEAM QRSLEIVKGLANQPVYPGHGPATRLDHEKRVNPFL >gi|294971004|gb|ADNU01000048.1| GENE 26 24637 - 25971 1202 444 aa, chain + ## HITS:1 COG:all5012 KEGG:ns NR:ns ## COG: all5012 COG0124 # Protein_GI_number: 17232504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Nostoc sp. PCC 7120 # 7 427 13 452 462 223 34.0 4e-58 MATAKLSGFPEWLPADRAVEERIIDLLKHTFELNGYAGIHTRAVEPLSALAKDGEIDKEI FAVSRLHSEGSEKNPMGLHFDLTVPTARYVVENAGHLNFPFKRYQIQPVWRGERPQDGRY REFIQADIDIIAEDTLPEHFEYEVPLVIVQAFDALGELGVPPVKVVANNRKLIEGFARGV GLENITAVLRCIDKYDKIGPQRVAELLQEEAGATSAQAEACLKLADIESATTEFADRVAA LGVSNDMLDEGVEALVKLIDQAHAQSPGSVVAQLKIARGLDYYTGTVYETLLQGHESLGS VASGGRYDALARTDKRVYPGVGMSIGVSRLMSRLIGKDRVLTATREVPTAVLVAVTDEET RAEANSVARSLRERGIPADVSPVASKFGKQIKFADKRGIPFVWFTDGESGHEVKDIRSGK QESAAADEWLPPAADLWPQVVRVV >gi|294971004|gb|ADNU01000048.1| GENE 27 26002 - 26364 443 120 aa, chain - ## HITS:1 COG:Rv0827c KEGG:ns NR:ns ## COG: Rv0827c COG0640 # Protein_GI_number: 15607967 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis H37Rv # 23 111 14 105 130 70 42.0 8e-13 MNPEPGERMETQPEAVDNPTSAQVQVAAETFRMLSSPTRLLTVWFLTHNEYDVTGLADAT GTSVQSISQHLAKMRLAGLVSSRRDGRRIYYVVDDPHVVTMVTQMFEHIAPDGSLAPDPE >gi|294971004|gb|ADNU01000048.1| GENE 28 26419 - 28191 1874 590 aa, chain + ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 587 1 591 608 855 71.0 0 MLRTHEAGSLRTDHVDQTVTVTGWVDRRRDHGGVAFIDLRDASGIVQVVVHEDVADELKN ETVVKVTGTVKPRPEGNTNDALPTGEIEVVDTDVEILAQAAALPFQVSEHAEDSKVGEET RLKYRYLDLRRPASGNVLRLRSDVNKTARQVLDKHKFIEIETPTLTRSTPEGARDFVVPA RLKPGSWYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEASFVE QDDIIALAEEILVELWKLIDVEIPTPIERMTYKDAMEKYGTDKPDLRFGLPLTDLTEYFA GTGFRVFQAPYVGAVVYPGGASLPRRQFDAWQDWAKQRGAKGLAYVQVGEDGTLGGPVAK NLSDEEKNGLAAAVGANPGDAIFFAAGKATDSRALLGAARVEIGERTGLIKEGDWSFVWV VDAPMFEPAEDAVAAGDVAVGDGSWTAVHHAFTAPKPEFADTFDTDPGSALAYAYDIVCN GNEIGGGSIRIHRPDVQERVFKVMGISQEDAQEKFGFLLDAFKFGAPPHGGIAFGWDRLV SLLAGTESIRDTIAFPKSGNGYDPLTAAPAPITDQQRKEAGVDYTPEDDE >gi|294971004|gb|ADNU01000048.1| GENE 29 28194 - 29576 1082 460 aa, chain + ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 5 456 42 467 473 432 56.0 1e-121 MDLFDDAAGGSVLDPLAVRMRPRSIDELVGQDHLTFKGSPLRQLAESDPRGVAGATSVIL YGPPGVGKTTIAHAVSHAEGRRFVELSAITAGVKDVREVIENARRDREMRGLTTVLFLDE IHRFSKAQQDALLPAVENRLVVLVAATTENPSFSVIAPLVSRSLVLQLKPLTEEHLRTLV TRAVSDPRGLAGQFELSEEALDYIVSVASGDARRSLTVLEAAAASAKAEKDGGAEGDGAG SGADSDSGAPVIEERHAAEAAQAAVVRYDRAGDQHYDVISAFIKSIRGSDPDAALHYLAR MISAGEDPRFICRRVVISASEDIGMADPNALTVAVSAQTAVERIGMPEGRIPLAQAVVYL ALAPKSNAAYMGINKALADVKAGKSGEVPPHLRDAHYPGAKGLGHGVGYKYSHDFPHSVS PQQYLPDSLVGTQYYDPTDNGYEKGMAERLAILQQLREPK >gi|294971004|gb|ADNU01000048.1| GENE 30 29825 - 30451 812 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116670828|ref|YP_831761.1| 30S ribosomal protein S4 [Arthrobacter sp. FB24] # 1 208 1 208 208 317 74 1e-85 MSSAMRSRRQVRLSRALGLPLTPKAEKYFERRPYPPGEHGRARRRNDSDYSIRLKEKQRL RAQYGIREAQMLKTYKEARKESGLTGEALVELLEMRLDALVLRAGFARTISQARQFVVHR HICVDGQRVDRPSYRVKEGQMIHVHERSQPMDPFQVAAAGAHRDVLPTVPGYLNVNLEAL QATLLRRPKREEIPVTCDVQLVVEHYSR >gi|294971004|gb|ADNU01000048.1| GENE 31 30443 - 30670 70 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIAATTASITRAFPATLAALMFPEVSDGPSSAIVSFNIGGAHPPHVRHFPIYPKTRTKQK PEAGNDLGLLNQALA >gi|294971004|gb|ADNU01000048.1| GENE 32 30573 - 31205 694 210 aa, chain + ## HITS:1 COG:mlr2295 KEGG:ns NR:ns ## COG: mlr2295 COG1230 # Protein_GI_number: 13472104 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Mesorhizobium loti # 23 204 6 188 193 120 46.0 2e-27 MAELGPSDTSGNINAANVAGKARVMLAVVAAINFVGFVGESVVALVIGSASLFADAADFL EDTMINLLVLTAVGWSLSARRKASYVLAGLILLPAVAAFVMVGLKLVTGEPPEPMTLSVT AVGALVINVVSAVLLFRVRTGGGALMTGAWLAARNDALANVMIIAAGVVTVFWASVWPDV VVGLVIGVIILYAAKEVFEQARAEVPELEG >gi|294971004|gb|ADNU01000048.1| GENE 33 31354 - 33096 902 580 aa, chain + ## HITS:1 COG:no KEGG:Bfae_29150 NR:ns ## KEGG: Bfae_29150 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 422 547 310 436 502 86 38.0 3e-15 MYERGIEERSCREIDVLTKARRSADAGLVTLARVVVQLFVKILPVMAPKQLEKVRLEMSR LAELAGSSGVPTRYVRIDGVGYVLVEDIVRLQYELSVEDAGIFATALDCTSRQVPSRIRP IVTMALLMPGLWSYVQNGQLSYERVRATAAQVAMAGIDIIEFDRLMMDRRLDVSPKVFRK YVNEIIAMLSTPQETNEHVRENRRVVCTHNPGGESVLSLIGPSIEIEAMHKRLEGGARAI IHGAIGSFSAHIGSKDFTPTTEVPVRSMGEVEINEERLLHQVMYDMLTGARPATQVTARI TRTGMTKATGLTEGCDVPAPQYGEEAIQMWLDQDEACGATQVKEVKLTISIPTNEEWLKS QAGINVMVPVVRLMPNEDRPRSRGERRTQVRDGDGPQEIDAGGLQEREGPAKSRSATGPP VPVMVNNTFALDAYTTDKLLREASSIYRYFTDPSTGEVCEIMPTRYRVTKQLARTLEVRW VYCSVPWCNRLARTCDKDHIEPFNHASPKNGGQTVLENLHPMCRKHHQAKTEGRLTAKRT SDGGVEWEFPRIGTVLSYPPASPLHQAHYKQLEAFASSLE >gi|294971004|gb|ADNU01000048.1| GENE 34 33150 - 34508 1036 452 aa, chain - ## HITS:1 COG:STM2436 KEGG:ns NR:ns ## COG: STM2436 COG1167 # Protein_GI_number: 16765756 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Salmonella typhimurium LT2 # 15 448 2 427 430 320 42.0 3e-87 MSQPRLEHVTHHMEITGQSASDIADSVRTLIDRGHLRPGDLLPPVRTLARDLGVNRNTTV AAYRLLATSGLVVGQGRAGTRVADLSPGPQDGYATDGADDTSAEVVDLASGNPLPALIPD VRPALTAAAGHTVLYGEPVVDAGLAQWAREWFAPYVPGAFELSVTSGAVDAIERLLAQSL MRDDAVGLEDPCFLASQQTVRLGGYRTVPIAVDERGMTPDGLRAALEAGVRAVVCTPRAQ NPTGASIDAERAQQLREVLADYPYVLVIEDDYYSLLSRVPFESIVGPEHQRWALVRSLSK FIGPDICVALVASDRETASRLALRLSPGTTWVSHLLQRIALAQLTDANARALIERAAGVY ADNNEAFVRALAGHGVEALAGDGISVWVPVGAPAAEVASRLARHGWTVRPGDEFGLTEGG PASHHIRVTVHELSEAQLESFVSDLVMAGGYA >gi|294971004|gb|ADNU01000048.1| GENE 35 34579 - 35478 1122 299 aa, chain + ## HITS:1 COG:Cgl0764 KEGG:ns NR:ns ## COG: Cgl0764 COG0214 # Protein_GI_number: 19552014 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Corynebacterium glutamicum # 1 299 21 319 319 453 83.0 1e-127 MTNTGENHHGTGRVKRGLADMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRAQ GGVARMSDPDLIDGIINAVSIPVMAKARIGHFVEAQVLQELGVDYIDESEVLSPADYVNH IDKQKFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEATKHIRTITAEINRLR ALTPDELYVAAKELQAPYDLVAEVASTGQLPVVLFTAGGVATPADAAMMMQLGADGVFVG SGIFKSGDPAKRAQAIVKATAFYDDPAVIADVSRGLGEAMVGINVADLPAPHRLAERGW >gi|294971004|gb|ADNU01000048.1| GENE 36 35475 - 35867 95 130 aa, chain + ## HITS:1 COG:Cgl0765 KEGG:ns NR:ns ## COG: Cgl0765 COG0311 # Protein_GI_number: 19552015 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Corynebacterium glutamicum # 7 95 3 91 200 94 52.0 7e-20 MNAPVRVGILALQGGVREHAHTLETLGAQVTLVRRPHELSQVEALVLPGGESSMIDKLSR AFDLQKPIQAAIAAGLPVYGTCAVLILLADRICTPLTWGRSRYAPCSSVRPLSPRWAPPP ALLPPSREAR >gi|294971004|gb|ADNU01000048.1| GENE 37 35789 - 35977 125 62 aa, chain + ## HITS:1 COG:Cgl0765 KEGG:ns NR:ns ## COG: Cgl0765 COG0311 # Protein_GI_number: 19552015 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Corynebacterium glutamicum # 2 58 137 193 200 63 54.0 8e-11 MFIRAPIVAEVGPAARSLATLPGGEVVAVEQGNLLGTSFHPELTGETRFHARLMDKARAR RG >gi|294971004|gb|ADNU01000048.1| GENE 38 35974 - 37185 1363 403 aa, chain - ## HITS:1 COG:BH3005 KEGG:ns NR:ns ## COG: BH3005 COG5505 # Protein_GI_number: 15615567 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Bacillus halodurans # 1 402 1 388 388 332 47.0 1e-90 MISDGFFFLATLIGISAILVYLEKRRGFAVFKYVPGFVFLYLIAATLNTLGVFAQSDSID AVGSGVKDALLPAMIMLLLFQCDVRQIIKLGPKLMLTYVAAVVSIFAGFVVAFLLFKGVL DPEAWKGFAALAGSWTGGSANMVAVQEILQAPESLFGHVLIVDTIVYSLWLLLMFSGTGI AQRFNAWVKADTSYLETQAAAVTNPGDTSAAEGGMSNGGDSNGGGETLDLVALFRVIALG LFASAAATWVGNQLPEIGVVVTSTTWTILIVSVLGLIIGSTRFGKMPGASEVSHIMLYII IGIIAAGSDFSSLVEAPLYLLAGFVVVTFHLLLMVVYAKLTRTELFSLAVASIANIGGVA SAPVVASAYSQQLVPVGVLYALIGAFAGTFFGLATGQILSMLS >gi|294971004|gb|ADNU01000048.1| GENE 39 37318 - 37959 210 213 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 188 20 199 223 85 33 8e-16 MTIMQLDHVNFTYASAAKRVLSNVSYDFEVGTFYAIVGSSGAGKTTMLSLLAGLDAPTQG AVLFDGDDIATTGYTRHRRDQIALVFQNYNLIDYLTPLENLRLVNPKASVEDLTRLGIDE AAAKRNVLALSGGQQQRVAIGRALVSSAPVILADEPTGNLDEDTAQGVIEILRDAAHEQN KCVIVVTHSRQLARAADVTLRLEQRKLVERKKA >gi|294971004|gb|ADNU01000048.1| GENE 40 37968 - 39137 966 389 aa, chain - ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 49 389 18 387 387 141 31.0 2e-33 MILIMTVVFTALVAQSGVRSTMAHVKHAINTNVGAGFTATSPSQNGAPSDSPKGIDPSLA DRLASLPEVAKHSLEASTLARPKDATPVAGTGGVQLDPKFAGDVSVTGTSDSELNPAFQG KLYQLTEGSHVGAGTTQALIHREFASHNHLAPGDTFTLTRDGSSVTVTVAGIFDGKTENP TGLPSGASQNQVFTDLESAQKLGAPLTTGRYFTHNANQLTSALDAAKRTAPDLTLEDNSA QFAPVLQAIAGVDRLLTILLLALCVAGAGVLTLVSTFWARGRIHEIGILLSLGKSKGNVL AQFAIESSIFAAVATLIAAGAGTVLSNHLGRAVFTQVGGETLSALQLTTNVGDVVAALAL GFVIVLLGVSVGVLPLITQRPKRILAKLS >gi|294971004|gb|ADNU01000048.1| GENE 41 39197 - 40483 1312 428 aa, chain - ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 427 26 458 459 230 34.0 4e-60 MATVVMATSAVTRSADQVSEEIDAKTGRGFVLENNPQNNLGTPRGAGTVKAADIATLSKL DGVESHVARQNVTADLVSAKAQKLDHDDYDKQREEQFGNAVNVWGVNNSEIDNNFRSGTL KLTQGRHLTPDDSHKALIHEDLAKANNLKVGDTLTLKGNKYDVDNQRQSTKEVKTQIVGL VSGENTKPAATRNELFANTVFTDLDTTRELYQFTPETEIYQDANFFVSKDANFDDVTKAA KAQGIDWQNYQISPSTQYLSGITGAVDGIKSIMRNTTVGATIFAAAVVALVLFLWLNERK KETGTLLSIGVTKASIAAQYLAELIFIAVPAFICAYFAANRFAQWMGDTTLASVNKSAAQ EMSQAGQFGADLESSASAQTLDNLTVGLSPTSAVQASIICVAVIAVVVAITAVPMLRKSP RAFLVDAT >gi|294971004|gb|ADNU01000048.1| GENE 42 40873 - 41355 365 160 aa, chain + ## HITS:1 COG:no KEGG:KRH_01810 NR:ns ## KEGG: KRH_01810 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 7 157 10 160 164 154 51.0 1e-36 MMAPVFRQFGPEETSLLQRATLGNMNWCGERFMMDDILARPEFSHYVTIRPERGDFGVVA EVEGNPIGVCWAQFLPADDPGYGFIDEQTPEASLWVSSGARGQGVGRRLLQALVSEAKVR GLRRISLSVEPDNFAKQLYRSLGFEDVGGREDDGVMLLLV >gi|294971004|gb|ADNU01000048.1| GENE 43 41946 - 42197 118 83 aa, chain - ## HITS:1 COG:no KEGG:Meso_0545 NR:ns ## KEGG: Meso_0545 # Name: not_defined # Def: ATP-dependent OLD family endonuclease # Organism: Mesorhizobium_BNC1 # Pathway: not_defined # 1 77 1 77 615 103 67.0 3e-21 MKVRQLEIENFRGVRAGKVIFVDNTLLVGENNVGKSTVCEALDLVLGPERTSRRPVVDEH DFHRSTEATSDGGTTRIGASSMI >gi|294971004|gb|ADNU01000048.1| GENE 44 42197 - 44329 1972 710 aa, chain - ## HITS:1 COG:STM4491 KEGG:ns NR:ns ## COG: STM4491 COG4930 # Protein_GI_number: 16767735 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent Lon-type protease # Organism: Salmonella typhimurium LT2 # 23 500 23 493 694 466 48.0 1e-131 MTDTASHSGEERNTESATPQQSDLDYKTNLLFAGSVVRKDLVKAVKGNAIVPSYVLEYLL GQYAASDDEATIQAGIDAVRKILADHYVHRNESELVKSTIREKGRHRIIDKVTVTLNDKQ DVYQASFANLGLNGVIVEPATVKANPKLLVSGVWCICDIEYFHSDDARVVPWILGSLKPI QMSSFDYEGYLASRKEFNTEEWIDLLLQSIGFNPEMFGRRAKLLQLVRLIPFVERNYNLV ELGPKGTGKSHIYSEFSPHGMLISGGEVTVPKLFVNNANGRIGLVGYWDVVAFDEFAGKK KRTDKALVDIMKNYMANKSFSRGVETLGAEASMVFVGNTSHNVPYMLKHSDLFDELPEAY HDSAYLDRLHFYIPGWEVDTIRSEMFSSGYGFVVDYIAEVLRSMRNTDYSDRYKQHFTLG SDISTRDRDGIHKTFSGLMKLIYPGGEATQEEIEELLRFAIEGRKRVKDQILRIDNTLAA VNFGYSDKSGTWRGVTTLEEDEYPNYYQARSPEAEGEVEASAEERGSAQAEVAVAAPVAP EVAAPLFEGHREFQENQRGVSYETLLMPYLHGATDITIVDPYIRLPHQGRNLVDLLALLA AAKDPADEIAVTLVTKEDRGEYAQQHLLMLKDIQDSTATVGIKFTVTWDETIHDRSIRTD HGWKLVLGRGLDIFQKGSGSQFDLGSRRQEFRQVFAFGITYIHETETDAN >gi|294971004|gb|ADNU01000048.1| GENE 45 44344 - 46839 2117 831 aa, chain - ## HITS:1 COG:no KEGG:RER_28940 NR:ns ## KEGG: RER_28940 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 1 831 1 831 831 1083 66.0 0 MSSLSVVLPHLEQRFESQRLVFWHDADGEYAAEIDALDLSGVTTVRVENNEYAVKNRVLH DEPAGKFLLYRGAPVPAGTGNWLLDLELAYGIFTADRTALVRQDLGLSGSGIDEVVREHE KFFRAVKRVESLKSLLATSDDADRLRAKMSAVVLGQHEHSMLELMRALLIENARGAHTKY DALAEQGLDSFHWAGVAKIYGYEASEPSVDDFVLWMFRQAIKRFASDTPGALRNIELDFA SLRNDRRSADALATLARRAAESLDYASTIEDAELAELVGNDLFEDVERKIISVLTQAIVE RTMGTREVSEIIRSRQSSIWVDGYRELYAALAAASDLLSELATARFEIASFDDGLDRYCK RWFRIDQLYRQFHFAARTTEYTGALEALRVEVEKHYANRFLYELGNAWQQQVDAVTDWRS VVLRHQTRFFTDHVEPIIRRGNRKAVVIISDALRYEVADDLGSRIRQEDRFDAELHAMLG VLPSYTQLGMAALLPHTTLAHSHDGDLVLVDGQRSDGTANRNKVLAPVDGFAIQAEDVLA MPRGELRELYRAHQVLYVYHDRIDAAGDKARTERQVFEAANDALRELVVLIKQLTNANAT NILVTADHGFLYQDTALAGASYLSTKPQGDELVVTNRRYVLGRGLKDDPAFRKFEPEQLG LSSDLEVQLPKSIHRLKLPGAGSRFVHGGAALQEIVVPVLTVNKKRKSDTRLVNVEVLPE TDKITTGQLVVKLFQSEPVSEKVQARTLRGGLYVGETLISNQPELLFDQPSDDTRDRYQS ARMLLSQDANEFNNRTVEFRLEEQIPNTTQWRVYQRAQYLLKRSFTSDFDF >gi|294971004|gb|ADNU01000048.1| GENE 46 46836 - 47063 232 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396109|ref|ZP_06806292.1| ## NR: gi|295396109|ref|ZP_06806292.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 75 1 75 75 85 100.0 1e-15 MPEIARNSEEAERDLLARASEVNEEDKDGIVVAEYWTALPPKAELRARIQQIYEAAAERV ARRKLEASSQREDNE >gi|294971004|gb|ADNU01000048.1| GENE 47 47056 - 50538 2530 1160 aa, chain - ## HITS:1 COG:MA2372 KEGG:ns NR:ns ## COG: MA2372 COG1002 # Protein_GI_number: 20091204 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Methanosarcina acetivorans str.C2A # 36 1152 55 1161 1161 721 37.0 0 METTPLKSFATWARRELITQVSARLTAVLAPGSPERVENQRAVTMLERDITAAGGGAKGK DAIADRVAYTWFNRIIALRFMDANGYTGVGVVSPAHGQQTGQPEILADAKRGSIDPAVVS NKRTVDTITGLLDGTRPSADAQGEAYTLLLAEYCRFWNRSMPFMFEREGDYTELLIPANL LAADSILARAAAVLSEEVCRDVEVIGWLYQFYIAERKDEVFAGFKKGNKAGAAEIPAATQ LFTPHWIVRYLVENSVGRLWMLNHPESRLIDQMDYYIAPVDEETDFLKIADPEELTVIDP ACGSGHMLTYAFDLLYAIYEEEGYAPSEIPGLILAQNLYGTEIDPRAGSLAAFALTMKAR AKQRTFLTKGLAPAITVIDSISFTPDELDLLVTRNGDLRAEEGVWNQFAEANVLGALILS DLGQTQRLSHRLETLDEANDLVWSATLNRASKVLRQATALSRRYAVVVANPPYMGSKNMG ATLADFASGKFPDSKSDLFAMFIERGFEFLKPGGLSAMVTMQSWMFLKSYAGLRKQLLND RHLECMVHMGNGVMGIAFGTAAAIWRSTPGEGVSSFSFVSTLDLYGDKPRVFPVPNSRHT EMSLRELSSIPGSPIAYWASSALRATFQTGRTIESVAPVRQGFQTGDNDRFMRFWHEVSR TRIAFDSESTEEFHACGARFAPYLKGGPLRKWFGNDEYIVAFSPHDFSELSKLGNKLPSR NLYFKDSITWSAMSSSDFGARYAGVGSTFSAKGACAFPVDRYSRSLTLAVLNSSVARQLL EFMGATMDFNVGSLREIPLPAEIPLDDRDRISSLVELLVHLHQQDWNLSESAPGYEENAL IKRGGVGRLASLVDGHFADWRAYSAQVNEAQEALDAIIAKSYGLEPSGELNVTLNNLVVG TQGRAERNVQLRDMIADLVSFAVGCMFGRYSLDETGLVLADQGATVQDYFAKVPQPRFTP DADNVLPIVDGDWFEDDIVARLRQFLRVAFGEQYFEENLRFVEESLGVKTLREYFITRAG RSKFYDDHVKRYKKRPIYWLFSSPKGSFNALIYMHRYTPSTVSTVLNEYLREFESKLEAN LQHQERLAAGEGTPREKAAALKEAERLRKVLVELSEYEHDVLYPLASQQIAIDLDDGVKA NYPKFYPALKKIAGLEATDA >gi|294971004|gb|ADNU01000048.1| GENE 48 50551 - 54087 2748 1178 aa, chain - ## HITS:1 COG:no KEGG:RER_28960 NR:ns ## KEGG: RER_28960 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 1 1178 1 1168 1168 1686 73.0 0 MQLTEIFAKDVQRPIEGVIKADDVAHLATEVDEYVLTNEAAKGLELLLEAYTNYTNANGV WISGFFGSGKSHLLKMLAHLLGDVEGDDFPRERVSASFRAKATDAFLPPLLDKADRIPAK SLLFNIDQKATLISKDQTDALLRVFVKVFDESRGYYGDQGHIARFERQLDDEGQLDTFKK AFLKVSGRDWVERRPSFGLPTVRRQVNEAYAQITGLDATTAPDILKTYQDTYSVSIEDFA DEVRAWLDKQPAGYRLNFFVDEVGQFIGSNTHLMLNLQTIAESLNTKCGGRAWVFVTSQE DMDKVVGDRTKQQGNDFSKIQARFKTRVKLTSADVEEVIRKRLLEKNDKGTQVLEAVYAQ ESANFKTLFDFVDGAKTYRNFTDETHFAGTYPFVSYQFPLFQAAIEGISDHNVFEGRNSS VGERSMLGVVQQVAKDIGNVEIGTLATFDAMFAGIRASLKSAAQRSIDRAERDLPDSGSP VTKLAVRLLKALFLVKYVESFRATPRNLTVLVYDRFGLDLPTLSKQVQDALMLLETQTYV QRNGNVYEYLTNEEQVIEEEIKNVEIDSSEVSTRLNKILSGDVVKTSKLRYAKNGQDFPF GYKLDDQPFGQQRELSLHFITPEYPYGPEEIRMHSAGKDELRVILAPDDRVLADLRLLIK TEKYTKRKQTSSLSPVEEQILRAKATQNAQREKELVERIRRAVGRADLVINAADLTSGSQ EAVTRITEGFQDLIARTYTQLSLLGGRTYSAQQVAGFANPDQAAMIDDSSMHALAAPADE VLSYVLQRDRLGEQITVKKIVDHFQAKPYGWDLASIECVTAWLVGTSKITLTVDSNTLKR SEVAAVLRNTQKHSHAVVAPQKTFDQRRIAALRTFCTDFFDEPNAPKDPLELARHASERL RAKCEELKARVSGSKYPFVTQLEAPIALLESVAGKPDDWFLTDFVLTDDLLDAKTDIIDP IQAFFGDEKQRGAQRKIYDEATQLLADNASNLNYLPSGSSQEVAQLLADPQAFRGNRMTK LKGAALELQSRIDEALVANRDGAVLEIDSRWAPLQTSTIYLGAADDAQRSVSQKVNAILD RISRENQIAVVREIANTFEECTYPAILDQLAAFPSISSADDSDELAPAPIKKQTVSVKSI SATGIHGVLETEEDVDRYLDALRAALVQALNDDKRIAL >gi|294971004|gb|ADNU01000048.1| GENE 49 54093 - 54692 527 199 aa, chain - ## HITS:1 COG:no KEGG:RER_28970 NR:ns ## KEGG: RER_28970 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 1 198 1 198 199 303 76.0 3e-81 MTLHELSRQEEHLFAVLSGERFLKMEGLSNEVPFFIYPYEPEHALDVAKAKKRVKNRLAS KGIEVREINLYDLSVDVLKERGDWDEVLEVEPELEKAEFTEMLQSMLNPQQHLAPAIRER LADGEFDIVFLTGIGEVFPYIRSHNVLNNLQSVVVGRPMLMFFPGRYEQSDTLGSSLVLF GKLKDDQYYRAKNILEQEP >gi|294971004|gb|ADNU01000048.1| GENE 50 54689 - 55309 401 206 aa, chain - ## HITS:1 COG:no KEGG:RER_28980 NR:ns ## KEGG: RER_28980 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 1 200 1 201 209 239 64.0 8e-62 MSIRSQGHDRYALSFTSGALLAREAVIVAPLFLEVRDWGLVRDQLRSENLLQARTASSGF RLAREVAQRLAVLTDPELELLRDASPSERGHLMWVAACRRYALIGDFAEEVVRERFLLLT PTLGYDDFDSFVRGKALWHPELAEVKDSTLQKLRSTVFRMLTEAGLLAGGEIVNAALSER VREALDAQLPSDLRYLPARDSKEASL >gi|294971004|gb|ADNU01000048.1| GENE 51 55731 - 56066 153 111 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_22310 NR:ns ## KEGG: Asphe3_22310 # Name: not_defined # Def: phospholipase/carboxylesterase # Organism: A.phenanthrenivorans # Pathway: not_defined # 2 111 205 378 378 132 48.0 6e-30 MADVDEAIGYAFRRGARQTVFVGWSTGAALVLDSPVLDWTARSADLTTPTLILRGTRDES VPIQLSQALRHARPDLVELESFDAGHTLSWNSDPDRWQEAVTTWLQARVPR >gi|294971004|gb|ADNU01000048.1| GENE 52 56438 - 56785 158 115 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGEDHVGEFMEDELLSMECRVGAGVEHEVVGLGCPPERAEVVVGVEISQFNDPKPAVPLV LDRAEELVEGEGITELKARHGRRYGLFGIHGSPFSVGSSDRHRLRLARHTSVLRR >gi|294971004|gb|ADNU01000048.1| GENE 53 56768 - 57178 396 136 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_22340 NR:ns ## KEGG: Asphe3_22340 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 136 1 143 143 223 88.0 2e-57 MTEDESQAAAEDLTKRLRLLMDVAVVESGTEPTYSQIADYLQERGTNLSRSRWTYMVSGD RYVQDPAVFEGLAAFLLGEDGAATPEKVSAQLDLVRSMHAAKVKSYTARTLGDISPKALH AITKFLDEEMTSTPEH >gi|294971004|gb|ADNU01000048.1| GENE 54 57397 - 57894 214 165 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_22350 NR:ns ## KEGG: Asphe3_22350 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 74 1 74 359 124 91.0 2e-27 MASNEDARAVREAKLDELHEKLTGAVESLVSGDGWRHALAFAAWFRSRSFNNTMLIWVQY EAAFEVGRVPEPFPYPGCRVPAMAGPLAAGDEGPARLHDLRARDGQVRVVQSCRSELLAS PGTTREAQGQRGRALADGRGAPSLRVGRLPDRRRTAADAAVAAVE >gi|294971004|gb|ADNU01000048.1| GENE 55 57993 - 59090 778 365 aa, chain - ## HITS:1 COG:no KEGG:Mesci_5896 NR:ns ## KEGG: Mesci_5896 # Name: not_defined # Def: hypothetical protein # Organism: M.ciceri # Pathway: not_defined # 19 321 8 317 365 126 32.0 1e-27 MTRGQTKQEHDRVSASQYRGQLDRKRKQRIDADKKAGEYRSKESSKRADAAKARQAAAKT TSSSTRSSKLRDAERREKEAETAGKEASRWQTRAAGYAKDEAALQTKLARAEQSEADAAE RRRKSVQQRADRRAAAERAQLESRISDTEMAVSTALRHLPAPKPEKLRVLMLGASAEGDL RVGREQKRIRAAVESALHRDQIELDVRSAATTADLLDGITKFRPHVVHFSGHSNDDLIVF EDEADEPHEGVIVSARAFARAISATDDPPLLVLLNSCRSAAQIDVLVAQVVPFAIGMADS IEDADAINYAAQFYAAVANGQSINSSHLSGQAALELAGLESADLPTLAWAPDVDPSTTIL VSPEG >gi|294971004|gb|ADNU01000048.1| GENE 56 59531 - 59974 491 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396119|ref|ZP_06806302.1| ## NR: gi|295396119|ref|ZP_06806302.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 147 1 147 147 294 100.0 1e-78 MAGALTGPIAAFNEIIGCTIDKPKVSQIARDVGATYTVWEDEELPDIHWIFEGKGLEFCF TDEILTAIFFQFIAEDGSNVGSWSGPLIDGFVAPEITPERADATFGEPEATGCGSPTWRR YEIGDHFIHFDFREEGLHMITLLLETP >gi|294971004|gb|ADNU01000048.1| GENE 57 59949 - 60761 453 270 aa, chain - ## HITS:1 COG:YPO1933 KEGG:ns NR:ns ## COG: YPO1933 COG3618 # Protein_GI_number: 16122179 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Yersinia pestis # 7 230 28 254 289 88 30.0 2e-17 MTVRVFDAHLHIIDPRFPLVPNNGYVPEAFTVDDYVARTDEFVARDGACEGARAFEVAGG AVVSGSFQKFDQTYLMDALERLGPGFVGVTQVPVDVSDAEVLRLHEAGVRAVRFNVARGG SAGLPDMDRLARRVFDLAGWHAEFYIDARSLDGDLGRRIAALPKASVDHLGMHRDGLPHL LRLVESGVMVKATGFGRVELDPAQVVTAIVDVNPRALMVGTDLPSTRAQRPFTVTDFDLL CDTLDASKLDGVFWRNACEFYGVRGFQGGG >gi|294971004|gb|ADNU01000048.1| GENE 58 60941 - 63595 2869 884 aa, chain + ## HITS:1 COG:ML0512 KEGG:ns NR:ns ## COG: ML0512 COG0013 # Protein_GI_number: 15827174 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Mycobacterium leprae # 1 882 1 905 908 826 51.0 0 MKTAEIKRRWLEFFESKGHTVVPSASVISSDPSILFNIAGMVQFIPYLTGREPAPFPRAT SVQKCVRTADIEEVGQTTRHGTFFQMNGNFSFGDYFKREAISMAWELLTTLEDKGGLGFD PNLLWVTVHQDDAASIDLWLEETSMPRERIQMRGNEDNFWHTGQPGPGGYCSEIYFDRGP AYGKEGGPVADEDRYIEIWNLVFMEFELSEVRTKVDFDIKGDLPAKNIDTGMGLERVAFL KQGVENMYEIDEVYPVIKKAEELSGRAYGTNHDDDVRMRVVADHVRSALVIIGDGVRPGN EGRGYILRRLLRRSIRAMRLLGVTQPVLPHLLPVSKDAMKQSYPELDTDFDRISKIAYAE ETAFLRTLESGTQLLTRTVAEVGKGGTIDGAVAFTLHDTHGFPIDLTVEMAHEAGVEVDV DGFKAHMEEQRQRAKADAKSKKGGGANLTAYSHLLEAGTSEFVGYDNLNTLATVRGIIKD GEAVPVAHAGDTVDVVLDITPFYAESGGQTADIGHLTGPDLKARVTDVQNILAGLPTHKV TVETGELETGALITAQVDPDHRYQAQQAHSATHLIHAALREVLGSNATQAGSLNNPGYLR FDYSYPEALSPAARQEIEECANTAVRDNFEVGYDFLPFEEAKKSGAMALFGERYPEIVRV VDINGTWSRELCGGTHVTRTAEIGPISLTSEASVGSGTRRIEASVGLDAMKQLARERSTV AQLSELLKVPGPEVYERVTGLMDRIKEAERTIAHLNQEKVLARATDAAASAQKLGPATVV TTELGDVANAADVRSFVLDVRNRLNDPAHVIAAVGLANGKPAVVIAVGPEAQKAGLKAGA LVTSACKTLGGGGGGKPDLAQGGGQDATKVSQAFQDVRDQVANS >gi|294971004|gb|ADNU01000048.1| GENE 59 63592 - 64035 362 147 aa, chain + ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 4 141 16 162 182 91 43.0 5e-19 MRRGRRLGIDVGAVRVGIAHSDPDGILASPLEVVNRRGGDNIALRRIQEIVEEVDPVELV IGDPTSLDGKARQSADKARRFAQKIVDRTGLPVRYVDERFTTTQAHLMLQEAGKTSKQRR ETVDAQAAVVILQTALDALAREDNSGD >gi|294971004|gb|ADNU01000048.1| GENE 60 64025 - 65152 1285 375 aa, chain + ## HITS:1 COG:BS_yrrL KEGG:ns NR:ns ## COG: BS_yrrL COG1559 # Protein_GI_number: 16079791 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Bacillus subtilis # 26 363 13 353 360 127 31.0 4e-29 MGIDDVFENKGTRKDARRRRRNRKIRRRRITAIIVVLALVAGVSGIVAVSTATGAFSSFF ESKKDYEGEGEGEVTVTVIPGASASQVANQLVEEDVIQAASPFLKEIESRGVVIKAGTFK MRKRMSSKAAVDVLEEATAAHRLTVAEGHTIKTIKANAIKAGVNEQQLDKAIDKKKPKDY GLDVDAPNLEGYLYPATYDIDPSRPVEALVQDMVNKTKDELNKLAIPHDDAHYYLTLASL VQIEANSDPEVQAKVARVFVNRVGKKSQTGGLLQSDATVAYIHGARDDLTTTKEERESNN PYNTYKHKGWTPGPINSPGEPAVRAALNPAKGDWQFFVATNPDEGTVKFASNYKDHQKNV EEFRKWLREHRKKNG >gi|294971004|gb|ADNU01000048.1| GENE 61 65145 - 65996 723 283 aa, chain + ## HITS:1 COG:Cgl1591 KEGG:ns NR:ns ## COG: Cgl1591 COG0169 # Protein_GI_number: 19552841 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Corynebacterium glutamicum # 2 244 5 255 276 90 33.0 2e-18 MVNFNACVAGSPIAHSKSPDLHTAALAVLGIPGQYGSVELTENQLAGHIDAHPELVGMSC TMPLKTTLAHLAHERNWNIDPTVTATRVANTFVNTPTPSVYNTDVAGIVGALRTSATSAA IVGSGATATSALVALKELGTTSVDIYARNQQTRADLAQLAQSLGMDAAHAGLESINWDHD VIVSTLPTGVDLDVPKRLTATVLDVAYAHGSVGEKARDAGAEVISGLAMLVEQAVAQFIH FVAVTGRSLTSEEVQRVTVAMYGAVHLTPPITPPKGGSWSPSH >gi|294971004|gb|ADNU01000048.1| GENE 62 65978 - 66730 972 250 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396126|ref|ZP_06806309.1| ## NR: gi|295396126|ref|ZP_06806309.1| possible H+/gluconate symporter and related permease [Brevibacterium mcbrellneri ATCC 49030] possible H+/gluconate symporter and related permease [Brevibacterium mcbrellneri ATCC 49030] # 1 250 1 250 250 369 100.0 1e-101 MESISLVAGLSLAVGAAIAISVIIWIIFPTLINDEAGLRLLRGLRTDNRPVWLVSFVMTA TGLVLAWISGFFLPLFMSRTYADIPIIIALGAFAGATAWLFWIDSILHRLPNLIVLPVTG LMIMAYLVSMVLGVTSKQSAFDQLWARGATPALAGLAGAGITVVIFAIVYLFGLALGKET LGLGDVKLAIPVGMVAGTASQWGLIVALVIMNLSALVYFLMHLGKRRNVAFGPHMLIGAW TAALITPLIL >gi|294971004|gb|ADNU01000048.1| GENE 63 66741 - 67928 1182 395 aa, chain + ## HITS:1 COG:MT2615 KEGG:ns NR:ns ## COG: MT2615 COG0082 # Protein_GI_number: 15842074 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 384 1 385 401 441 65.0 1e-123 MLRWLTAGESHGEALVGILEGLPAHVDVTTEDISRALARRRLGYGRGARMKFEADEVRLL GGVRHGKTLGGPVAIEVGNTEWPKWETVMSPNPVDPDELEGQARAAKLTRPRPGHADLVG MMKYDWDEARPILERASARETATRVALGAVASQFLKALDIEIVSHTVAIGPVEGGRDLAR PTAADVDQLDADPLRCFDPALSQRMVAEVEDAKKAGDTLGGVVEVIVYGTFPGLGSHVTG DRRLESRLAASLMGIQAIKGVEIGDGFETARRRGSVAHDEIDAENGVKRLTNRAGGIEGG MTTGEPIIVRAAMKPISTVPRALSTVDVATQEPAKAHHQRSDVCAVPAAGVVAEAMVALE LAQAVLEKCGGDSVDEVKRNRDAYLSHIDPFLLGQ >gi|294971004|gb|ADNU01000048.1| GENE 64 67925 - 68548 484 207 aa, chain + ## HITS:1 COG:MT2614 KEGG:ns NR:ns ## COG: MT2614 COG0703 # Protein_GI_number: 15842073 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 22 188 4 166 176 90 41.0 2e-18 MSVEPVPRPAPPLNPVPAAGARIALIGPPAAGKSTIGRLLAERLDIPLRDTDARIVAEHG DIQQIFASRGEARFREIEREVVRKSLRELLDRPGVVSLGGGAILNPGTRAQLKHPAIKVI TIMIDAEVARVRLGGSRRPLLDDDEDPVAAWQALVDERQPLYESVSTATVSASNEPPSTV VNRVVDVLTKLQREEEYARFDQEETID >gi|294971004|gb|ADNU01000048.1| GENE 65 68541 - 69635 1130 364 aa, chain + ## HITS:1 COG:ML0518 KEGG:ns NR:ns ## COG: ML0518 COG0337 # Protein_GI_number: 15827180 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Mycobacterium leprae # 12 355 18 359 361 342 54.0 8e-94 MTEIRVTGGGDYPVIVGSKLLGKLPQLLGPSVQRVLVIYPRALRTTGELVREDLASTGLE AIAAEIPDAEEAKHIRVAEFCWQILGQSDFTRSDAIVAVGGGAITDLAGFVAATWLRGIK FVNIPTTFLGMVDAAVGGKTGINTAEGKNLVGAFHSPAGVLADTDTLATLPENELFTGMA ESVKCGFIADPTILDLIENTPKDVLANHESPELRQIIERTIEVKARVVSGDFKESGTREI LNYGHTLGHAIERNERYQWRHGAAVAVGMMFAAELGVMLKNLPAEVVDRHRAILEHLGLP TGYRSDRWPQLLDTMKRDKKARGNLMRFVVLRDIAQPVVVEVPDTSLLYTAYQAVGVDSP VRTI >gi|294971004|gb|ADNU01000048.1| GENE 66 69692 - 70255 650 187 aa, chain + ## HITS:1 COG:MT2609 KEGG:ns NR:ns ## COG: MT2609 COG0231 # Protein_GI_number: 15842068 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Mycobacterium tuberculosis CDC1551 # 1 185 1 185 187 277 71.0 7e-75 MATTNDLKNGMVLKLDNELWQVVEFLHVKPGKGPAFVRTKIKNVLSGKIVDRTFNAGTKV ETANVDRRDMQYLYHDGSDYIFMDEQDYDQVPLSEALVGDAANFMLENQSVQVAFHEGNP LYIELPAAVELTISHTEPGLQGDRSSGGTKPATVETGYEIQVPLFLETGTRVRVDTRTGD YLGRVKE >gi|294971004|gb|ADNU01000048.1| GENE 67 70252 - 70656 393 134 aa, chain + ## HITS:1 COG:ML0523 KEGG:ns NR:ns ## COG: ML0523 COG0781 # Protein_GI_number: 15827185 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 1 127 5 136 190 134 51.0 6e-32 MSARYRARRRALELLFEAEARNLPEAELIKLRENDEEYPLRPYSREIVDGVVTHRAQLDE LISTYAHGWTLERMPRVDRAVLRIGLWEILYNDEVDDPVAIDEAVTLAKEYSTDDSPAFV NALLDRISKLKDTL >gi|294971004|gb|ADNU01000048.1| GENE 68 70716 - 71258 497 180 aa, chain + ## HITS:1 COG:Cgl1575 KEGG:ns NR:ns ## COG: Cgl1575 COG2065 # Protein_GI_number: 19552825 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 6 178 11 184 192 178 59.0 5e-45 MRTRTVLDAKEMARALSRIAHEIIEANKGAQNLVLLGIPTRGVPLAQRLAERIGQIEPGV SVPEIVGSLDITMYRDDLKAGKLRTPEPTNTPRGGIDGKTVVLIDDVLFSGRTIRAALDS LADVGRPEAVRLAVLVDRGHRALPIRADHVGKNLPTSLSERVSVTVKEIDGEDSVTISEA >gi|294971004|gb|ADNU01000048.1| GENE 69 71258 - 72226 974 322 aa, chain + ## HITS:1 COG:Cgl1574 KEGG:ns NR:ns ## COG: Cgl1574 COG0540 # Protein_GI_number: 19552824 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Corynebacterium glutamicum # 1 322 1 310 312 333 56.0 2e-91 MKHLLSTKDLSRDDAVELLDIAEEMTQVSAREVKKLPVLRGRTVVNLFFEDSTRTRISFE AAAKRLSADVLNFSAKGSSVSKGESLQDTIQTLGAMGADAIVVRHPGSGTPHRIATSGWL HAPVLNAGDGTHEHPTQALLDSFTLRRVMSGQPASGPADGCRGRTLEGATVAIVGDVLHS RVARSNVHLLNTLGARVVLISPPTLLPWGVETWPCEVSYSFDEAIADYDFDAVMMLRVQL ERMHQAFFPNPREYSRMWGLTQERLGALGDDTWIMHPGPMNRGFEICSAAADSPRAVVLN QVENGVAVRMAALYRLLTGQEG >gi|294971004|gb|ADNU01000048.1| GENE 70 72229 - 73536 1258 435 aa, chain + ## HITS:1 COG:Cgl1573 KEGG:ns NR:ns ## COG: Cgl1573 COG0044 # Protein_GI_number: 19552823 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Corynebacterium glutamicum # 2 418 21 442 447 405 51.0 1e-113 MSILITSVKPYGGEPTDIAIDGGRIVPHVDNPDTTIDGSGLIALPGLVDLHTHLREPGKE DAETVLTGSQSAARGGYTCVHAMANTQPVADNAGVVEQVWNLGRQAGYTEVVPIGAVTVG QEGTALAELGAMASSAAGVRIFSDDGMCVHDPLLMRRALEYVKSFNGIIAQHAQEPRLTE GAQMNEGVVSAELGLPGWPAVAEEAIIARDILLAEHVGSRLHVCHLSTKGSVELVRWAKS RGVNVTAEVTPHHLMLTDELVRSYDPVYKVNPPLRTEADVKAVRDGLADGTIDIVGTDHA PHTAEHKCAEWTAAAMGMVGMETALAIVIEAMKDHDFDWHDVARVMSSRPAEISGLTTHG SLDTGAAANIVLIDPAADVTIEPNDHATLGRNNPFKGFKVDTQVVHTFLYGAHVVRNGEL AEPHPISGGAHTWID >gi|294971004|gb|ADNU01000048.1| GENE 71 73524 - 74009 405 161 aa, chain + ## HITS:1 COG:no KEGG:KRH_13340 NR:ns ## KEGG: KRH_13340 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 2 150 6 157 167 124 45.0 2e-27 MDRLIPVLILLAVLVLLFFLMWKGWKNRQASQTNIPEPHRPTCEPSGPGFQGMYVATTYA SNPLERINVHHLGVRTNGTLHIEDDRVVFMLDGIDGIEIPFTAIDEVTTASGMVGKFVEK DGLVVIVWTLGDTQVATGFRPRLAHARTEILESLALTEKVK >gi|294971004|gb|ADNU01000048.1| GENE 72 74006 - 75136 975 376 aa, chain + ## HITS:1 COG:ML0535 KEGG:ns NR:ns ## COG: ML0535 COG0505 # Protein_GI_number: 15827191 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Mycobacterium leprae # 7 374 4 372 375 405 55.0 1e-113 MSTFEPAVLVLEDGTVYEGSAYGARGTTFGEAVFVTAMTGYQETLTDPSYHKQVVIQTFP HVGNTGVNDEDDESRDYWVAGYVVRDASRISSNWRSTEDLETRLKRLGIVGISDVDTRAL TLRLREEGSMRVGIFSGEEASTDHATLLEQVKAQPRMEGSALADEVSTTSAYTVEPQGEK KYTVVAYDLGIKGRSPFHLAARGMEVHVVPATTMFEELKSYNPDGVFFSNGPGDPATADH QVEVLTRVLEEKIPFFGICFGNQLLARALGFETYKLRFGHRGINQPVLDVETGRVEITAQ NHGFAVDAPIGEPVNAPNEKFGRVQVSHIGLNDNVVEGLACLDIPAFSVQFHPEAAAGPH DSENLFDRFARIMSEA >gi|294971004|gb|ADNU01000048.1| GENE 73 75146 - 78415 3151 1089 aa, chain + ## HITS:1 COG:MT1428 KEGG:ns NR:ns ## COG: MT1428 COG0458 # Protein_GI_number: 15840842 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Mycobacterium tuberculosis CDC1551 # 1 1087 1 1105 1115 1337 65.0 0 MPLRNDLQSVLVIGSGPIVIGQACEFDYSGTQACRVLRSEGLRVILVNSNPATIMTDPDI ADATYVEPIDPEVIEAIIAKERPDALLPTLGGQTALNAAINLHKAGVLEKYGVELIGADV DAIERGENRQQFKGVVETCGAEVARSRIAHTMDECLEAAQELGYPMVVRPSFTMGGLGSG MAYNEDDLRRIAGDGLHDSLTNEVLLEESILGWKEYELELMRDRNDNVVVVCSIENFDPV GVHTGDSITVAPAMTLTDVEFQKMRDIGIAIIREVGVDTGGCNIQFAVNPDNGRIVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYSLDEIRNDITQETPASFEPALDYVVVKVPR FAFEKFPAADPTLTTTMKSVGEVMALGRNFTTALQKAMRSLEQKGSQFDFTARFDLDNED VKKDVLADLAHPTAERIHTVITALNSGMSVEDVHEASDIDPWYLDQMKLLCEVAEVVRTQ ELSPQVLKLAKRHGFSDEQIGALRHLDAEVVTGVRHALGIRPVYKTVDTCAGEFAAHTPY HYSSYDQETEVQPRDREAVIILGSGPNRIGQGIEFDYSCVHATMALAEAGYETIMVNCNP ETVSTDYDTADRLYFEPLTFEDVMEIYNAELAVGPIKGVVCTLGGQTPLGLAARLKEAGV PVLGTQPEAIDLAEDRGEFGRVLHQAGLLAPKHGTATTYEEAEAIAESIGYPVLVRPSYV LGGRGMQIVYDNAQLRSYMDSATEVSPTRPVLVDRFLEDAVEIDVDALFDGEDLYIGGVM EHIEEAGIHSGDSACVLPAITLGENVLKRVRSATRAIAEGTGVRGLLNIQFAVAADVLYV IEANPRASRTVPFVSKATGKQLAKAAAKIAVGETIASMRGTLLEAEGDGSHVNLDHPVAV KEAVLPFRRFRDVDGRVVDSILGPEMRSTGEVMGIAPTFPMAFAKAEMGAGASLPTQGRV FVSVADRDKRAAVLPVKKLADMGFEVICTEGTAAVMARYGIKTVAMKKYFELQEGERSIL DDIAERKIDLVVNVPSGRQERADGYEIRAAATAAPLPILTTTAEFAAAVSAIEAIRSSDF GVASLQDWA >gi|294971004|gb|ADNU01000048.1| GENE 74 78412 - 79236 605 274 aa, chain + ## HITS:1 COG:Cgl1570 KEGG:ns NR:ns ## COG: Cgl1570 COG0284 # Protein_GI_number: 19552820 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Corynebacterium glutamicum # 1 255 1 256 278 191 44.0 9e-49 MSFAHLWQSAIARNPLCVGIDPAPATLEAWGLEDTPEGLASFGTTMLEQCHMEAWCVKPQ VAFFERHGAAGIAVLESVHRIAQDLGMVVITDAKRGDIGSTMDGYADAYLNPSRPLATDA LTVSPYLGTDSLNSVFKAAEKYGTGFFALALTSNPSGPQVQHAQNAGTAVAAQVVETVYN FNESVGAPLGGLVVGATIGDAARKLGIDLGAFNGPILSPGYGAQGATVEDLHTVFGRAFD KVFVNVSRGISNSGPQKIKHHIRTISSEIRGDAL >gi|294971004|gb|ADNU01000048.1| GENE 75 79273 - 79590 300 105 aa, chain + ## HITS:1 COG:no KEGG:Jden_1319 NR:ns ## KEGG: Jden_1319 # Name: not_defined # Def: hypothetical protein # Organism: J.denitrificans # Pathway: not_defined # 1 102 7 108 109 91 54.0 1e-17 MALEPLTPEQRSAALEKAFQARQARAQVKADLKAGKTTLKSVLTNAAEDEAVSKMKVVDL LKSIPGVGERRAQGTMEEIGIAASRRIKGLGVHQKAALLEKFDNV >gi|294971004|gb|ADNU01000048.1| GENE 76 79587 - 80159 486 190 aa, chain + ## HITS:1 COG:ML0541 KEGG:ns NR:ns ## COG: ML0541 COG0194 # Protein_GI_number: 15827197 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Mycobacterium leprae # 4 181 24 202 210 180 55.0 2e-45 MTPRLTVLTGPSAVGKGTVGAYIREHFPHVWFSVSATTRDPRPGEIDGVHYQFVSPAEFD HMVKSGQMLETAVVHGRNQYGTPREPVMQALDEGKFPLLEIDLAGARQVKERMPEARFIF LAPPSWDELVRRLVGRGTESEEEQARRLETAKVELAAEEEFDHTVVNHDVRTAAQELVTL MGLSVDNPEN >gi|294971004|gb|ADNU01000048.1| GENE 77 80203 - 80532 459 109 aa, chain + ## HITS:1 COG:MT1435 KEGG:ns NR:ns ## COG: MT1435 COG1758 # Protein_GI_number: 15840849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Mycobacterium tuberculosis CDC1551 # 5 75 55 125 133 92 70.0 1e-19 MSVQPEGITNPPIDDLLEKTESKYELVIEASRRARQINAYYAQLQEGLLENVGPLVTPEP NEKPLSIALREIDQDKIIIREATEADFAAPESEPAADDLGFTFDQDVEE >gi|294971004|gb|ADNU01000048.1| GENE 78 80533 - 81774 995 413 aa, chain + ## HITS:1 COG:Cgl1566 KEGG:ns NR:ns ## COG: Cgl1566 COG0452 # Protein_GI_number: 19552816 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Corynebacterium glutamicum # 2 370 12 380 420 350 54.0 2e-96 MNIVLGVAGGIAAYKVCHVVRLLKEQGHSVRVVPTEAALKFVGAPTWEALSGQPVATDVF DHVEEVQHVNVGHSADLVIVAPATADLLARARAGMGNDMLAATLLVATCPVVYVPAMHTQ MWQHPATQDNVATLRARGAHVMEPASGRLTGTDSGPGRLPEPADIVEYALSQVEGLPSTA LAGTATALADTQVFISAGGTREPLDPVRYLGNRSSGKQGVALAQVALDMGANVTVCAANV ANDVLEPIRGRATIVPVETTEELHEQCVAHGEESELIIMAAAVADYRPAEIAEHKMKKSG DEGMTLSLVQNPDILKDLVARFGDTKTIVGFAAETGSDESTPESLAQQKLLRKGCRALVF NSVAQGAVFGDDATSVIVYERDGDDVRERVRASGTKQEVSRVVMESVAQLLPS >gi|294971004|gb|ADNU01000048.1| GENE 79 81785 - 82969 1156 394 aa, chain + ## HITS:1 COG:Rv1392 KEGG:ns NR:ns ## COG: Rv1392 COG0192 # Protein_GI_number: 15608531 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Mycobacterium tuberculosis H37Rv # 5 394 6 403 403 510 68.0 1e-144 MKSLRYFTSESVTEGHPDKICDQISDAVLDNLLAQDQRSRVAVETLVTTGLVHVAGEVTT DGYADVATIARDVITGIGYTNSDMGFDGHSCGVTVSIGSQSTDISDGVTTSIEARAGGND PLERLGAGDQGLMFGYADNATPELMPMPIHLAHRMSQRLSEVRKNGTVDYLRPDGKTQVT IGYDGDKAVSVDCVVLSSQHSEGTDHRQLEGDIREHVINPILNDSGLDTSGTEFWINPAG PFIVGGPMGDAGLTGRKIIVDTYGGFARHGGGAFSGKDPSKVDRSGAYAMRWVAKNVVAA GLADRAEVQVAYAIGKSHPVGLYVETFGTEKEDPARIEKAIEEVFDLRPAAIIRELALNR PIYNLTSTYGHFGRELPEFTWENTDRAEALTRAI >gi|294971004|gb|ADNU01000048.1| GENE 80 82987 - 85008 1103 673 aa, chain + ## HITS:1 COG:Rv1402 KEGG:ns NR:ns ## COG: Rv1402 COG1198 # Protein_GI_number: 15608540 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Mycobacterium tuberculosis H37Rv # 33 614 4 588 655 329 39.0 1e-89 MELPGFDNQLRIRGGLTPAPTQPVAAVLLETPVPHLARTFDYAVTESLDEDAQPGVRVRV KFSGRLMSGFIVARTDTTDHDGELHALERVTSPVPVLTPELLELCASLANKYAGTVPDVV RLAIPPRHAGGEKTALGAETSATPTFPDLPGPLGESEADFLGALRTWVQSEEQAPGPRAA FVVPPGEQPGRGWVHAALRATAEVLAAERSVLIVVPDQSSVETVTSILGPAAVTLTHEQG PQARWSAWVKALTGKARVVVGTRASAYVPMPDLGLIIMCFDDEDAFIEPRAPYCHARSVV CERVAQTHVATLFIDHARSVDVQRLVDAGWMGDVTLPRPRVRELTPVVLDSGFTRSIADF TSLPERAFDLMRQALGRAKTQGHVGPVLVQVPRTGYITLVVCERCRETLRCSCGAPMRAA SVTGPFACSACGYRSDQATCECGSTRFRSAGQGLETVHYELGRAFPGVPVVRSGGDRIIA RVDPEPQIVVATTGAEPYTEGGYALALLFDTLWPGPSLRSTQTAIARRMRAVNLVRPAPG RVLVLDENPDIIRTLVHYDPVGWARHELEVREELGMPPVVRACEVSGPRAVVEQTLGQLN TIDGVKLFEEREGPPRSHYTRNSTDDDATITAVLGIERHASAQVTELLKRITTSAIMHGK PAPRIRIDDPDAL >gi|294971004|gb|ADNU01000048.1| GENE 81 85010 - 85490 304 160 aa, chain + ## HITS:1 COG:lin1937 KEGG:ns NR:ns ## COG: lin1937 COG0223 # Protein_GI_number: 16801003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Listeria innocua # 5 160 3 159 312 133 42.0 1e-31 MEGVRIVFAGTPSVAVPALHALREHHQVVAVLTRPDAPVGRKRIMTPSPVKTAALEAGID VIEASHVDDEVCERIAQYQPNVGAVVAYGALLKDNALSLPTHGWFNLHFSLLPAYRGAAP VQWALINGEATTGLTVFQLDRGMDTGPVLDQREYPLPKKD Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:55:14 2011 Seq name: gi|294970934|gb|ADNU01000049.1| Brevibacterium mcbrellneri ATCC 49030 contig00054, whole genome shotgun sequence Length of sequence - 73160 bp Number of predicted genes - 69, with homology - 68 Number of transcription units - 36, operones - 19 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 222 - 683 120 ## COG2814 Arabinose efflux permease 2 2 Tu 1 . - CDS 646 - 1296 251 ## - Term 1905 - 1955 0.2 3 3 Op 1 . - CDS 2147 - 2383 86 ## Achl_3374 XRE family transcriptional regulator 4 3 Op 2 1/0.182 - CDS 2356 - 2763 264 ## COG1396 Predicted transcriptional regulators - Term 2811 - 2857 -0.5 5 4 Tu 1 . - CDS 3076 - 3429 327 ## COG0789 Predicted transcriptional regulators 6 5 Op 1 . + CDS 3541 - 4686 841 ## COG2814 Arabinose efflux permease 7 5 Op 2 . + CDS 4704 - 5606 648 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 8 6 Tu 1 . + CDS 5711 - 6082 122 ## Ksed_06540 DNA-binding domain-containing protein - Term 6142 - 6170 -1.0 9 7 Tu 1 . - CDS 6254 - 6445 136 ## gi|295396154|ref|ZP_06806336.1| GMP synthase 10 8 Op 1 . + CDS 6555 - 7157 379 ## COG1309 Transcriptional regulator 11 8 Op 2 . + CDS 7229 - 8392 699 ## COG2814 Arabinose efflux permease + Term 8544 - 8579 1.1 12 9 Op 1 . + CDS 8707 - 8949 60 ## gi|295396158|ref|ZP_06806340.1| conserved hypothetical protein 13 9 Op 2 . + CDS 9033 - 9428 539 ## CPE0314 hypothetical protein 14 10 Op 1 . - CDS 9437 - 10384 746 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 15 10 Op 2 . - CDS 10464 - 11381 598 ## COG2951 Membrane-bound lytic murein transglycosylase B 16 10 Op 3 . - CDS 11381 - 13243 1108 ## gi|295396162|ref|ZP_06806344.1| conserved hypothetical protein 17 10 Op 4 42/0.000 - CDS 13273 - 14115 779 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 18 10 Op 5 . - CDS 14112 - 14849 267 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 19 10 Op 6 . - CDS 14846 - 15841 1070 ## Micau_4057 hypothetical protein 20 10 Op 7 . - CDS 15838 - 17415 1245 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 21 10 Op 8 . - CDS 17412 - 20081 1774 ## HMPREF0733_11002 hypothetical protein - Prom 20115 - 20174 1.5 - Term 20190 - 20229 10.1 22 11 Op 1 41/0.000 - CDS 20249 - 21847 1539 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 23 11 Op 2 . - CDS 21890 - 22183 500 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 22375 - 22434 2.2 24 12 Op 1 8/0.000 - CDS 22453 - 23391 577 ## COG0084 Mg-dependent DNase 25 12 Op 2 1/0.182 - CDS 23391 - 24974 1361 ## COG0143 Methionyl-tRNA synthetase 26 12 Op 3 . - CDS 24993 - 25832 611 ## COG0313 Predicted methyltransferases 27 12 Op 4 . - CDS 25895 - 26554 445 ## gi|295396173|ref|ZP_06806355.1| HesB/YadR/YfhF 28 13 Tu 1 . + CDS 26650 - 28164 1289 ## COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase + Prom 28172 - 28231 2.8 29 14 Op 1 2/0.091 + CDS 28254 - 29435 925 ## COG1083 CMP-N-acetylneuraminic acid synthetase 30 14 Op 2 . + CDS 29493 - 30374 970 ## COG2089 Sialic acid synthase + Term 30386 - 30424 11.6 31 15 Op 1 . + CDS 30433 - 31425 666 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 32 15 Op 2 . + CDS 31422 - 32852 974 ## SCAB_35061 hypothetical protein 33 15 Op 3 . + CDS 32854 - 35007 1096 ## AARI_34200 hypothetical protein 34 16 Op 1 . - CDS 34907 - 36397 1017 ## SCAB_16841 integral membrane protein 35 16 Op 2 7/0.000 - CDS 36406 - 36885 360 ## COG2246 Predicted membrane protein 36 16 Op 3 4/0.091 - CDS 36886 - 37854 613 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 37 17 Op 1 1/0.182 - CDS 38093 - 40150 1267 ## COG1835 Predicted acyltransferases 38 17 Op 2 . - CDS 40226 - 42289 1271 ## COG1835 Predicted acyltransferases - Prom 42471 - 42530 3.0 + Prom 42451 - 42510 1.9 39 18 Op 1 32/0.000 + CDS 42551 - 43591 1064 ## COG1135 ABC-type metal ion transport system, ATPase component 40 18 Op 2 22/0.000 + CDS 43578 - 44240 796 ## COG2011 ABC-type metal ion transport system, permease component 41 18 Op 3 . + CDS 44356 - 45192 1089 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 45279 - 45329 15.1 - Term 45268 - 45316 16.9 42 19 Tu 1 . - CDS 45361 - 47100 1586 ## COG2759 Formyltetrahydrofolate synthetase - Prom 47140 - 47199 2.1 + Prom 47057 - 47116 1.9 43 20 Tu 1 . + CDS 47158 - 47922 508 ## COG3152 Predicted membrane protein + Term 47942 - 47985 13.1 44 21 Tu 1 . - CDS 47952 - 48083 125 ## gi|295396190|ref|ZP_06806372.1| conserved hypothetical protein + Prom 48000 - 48059 3.2 45 22 Tu 1 . + CDS 48082 - 48681 522 ## COG3152 Predicted membrane protein + Term 48698 - 48736 8.1 46 23 Tu 1 . + CDS 48782 - 48997 222 ## gi|295396192|ref|ZP_06806374.1| conserved hypothetical protein - Term 48834 - 48869 -1.0 47 24 Tu 1 2/0.091 - CDS 48974 - 49429 464 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 48 25 Tu 1 . - CDS 49489 - 50868 1488 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 50801 - 50860 2.2 49 26 Op 1 . + CDS 51038 - 51388 481 ## COG3631 Ketosteroid isomerase-related protein 50 26 Op 2 . + CDS 51431 - 52291 785 ## COG3375 Uncharacterized conserved protein + Term 52304 - 52342 -1.0 51 27 Op 1 5/0.000 - CDS 52331 - 53959 1751 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 52 27 Op 2 . - CDS 53952 - 54722 719 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 53 27 Op 3 . - CDS 54739 - 55701 902 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 55729 - 55788 3.5 54 28 Tu 1 . + CDS 55876 - 57285 1310 ## COG0471 Di- and tricarboxylate transporters 55 29 Op 1 . - CDS 57282 - 57848 388 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 56 29 Op 2 . - CDS 57862 - 58827 669 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog 57 30 Op 1 . + CDS 58862 - 59161 360 ## COG2388 Predicted acetyltransferase 58 30 Op 2 . + CDS 59230 - 60687 1522 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 60703 - 60754 17.0 59 31 Op 1 . - CDS 60768 - 62255 990 ## gi|295396205|ref|ZP_06806387.1| conserved hypothetical protein 60 31 Op 2 . - CDS 62324 - 62935 526 ## PROTEIN SUPPORTED gi|227427635|ref|ZP_03910696.1| acetyltransferase, ribosomal protein N-acetylase 61 31 Op 3 . - CDS 62938 - 63513 302 ## gi|295396207|ref|ZP_06806389.1| hypothetical protein HMPREF0183_1887 62 31 Op 4 . - CDS 63510 - 64406 1008 ## COG1210 UDP-glucose pyrophosphorylase + Prom 64261 - 64320 2.3 63 32 Tu 1 . + CDS 64429 - 65058 421 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 64 33 Tu 1 . + CDS 65186 - 65533 136 ## COG2331 Uncharacterized protein conserved in bacteria + Term 65536 - 65576 -1.0 65 34 Op 1 . + CDS 65660 - 66316 231 ## HMPREF0573_10484 hypothetical protein + Prom 66324 - 66383 2.1 66 34 Op 2 . + CDS 66451 - 66927 528 ## COG1970 Large-conductance mechanosensitive channel + Term 66952 - 66995 15.2 - Term 66879 - 66922 -0.6 67 35 Op 1 . - CDS 66991 - 67263 204 ## gi|295396213|ref|ZP_06806395.1| conserved hypothetical protein 68 35 Op 2 . - CDS 67172 - 71629 3406 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 69 36 Tu 1 . + CDS 71775 - 72917 1321 ## COG0183 Acetyl-CoA acetyltransferase + Term 72943 - 73017 17.4 + TRNA 73051 - 73123 69.3 # Arg CCT 0 0 Predicted protein(s) >gi|294970934|gb|ADNU01000049.1| GENE 1 222 - 683 120 153 aa, chain + ## HITS:1 COG:mlr4084 KEGG:ns NR:ns ## COG: mlr4084 COG2814 # Protein_GI_number: 13473472 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Mesorhizobium loti # 38 111 3 76 397 62 51.0 4e-10 MTTPRPRRSSHQPQPLSPADRTAPLEVACELSRRTPALALLALSTGGFGIGLTEFIIAGL LTEVGSDLYVSISAAGHFVGAYALAVVPGALIITPMLMRRTPKLALVILLAPSSSGASCP PGHRTTRSCWPAALPPHSRMVATSASAPCLPLP >gi|294970934|gb|ADNU01000049.1| GENE 2 646 - 1296 251 216 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFVAEARVPHDPRLQSGHGGETDQAEQEQADAHRHGQSRNRDRSKNHHRKQHGQDNDGLV GVMVSGLASHDVRCEQPGSEDHEQPGDGFGWIAGDLTQQRLDVGEDPEHPAEHQRGRGQC PEDLRLGQGSELGPQRQLNAFRIGRGHQCDDTGKGEQADSGDAPEYRLPAQMLTHPDAQR HPSTFAMVKPANSAVFAEARLFSETREEASMVPMPK >gi|294970934|gb|ADNU01000049.1| GENE 3 2147 - 2383 86 78 aa, chain - ## HITS:1 COG:no KEGG:Achl_3374 NR:ns ## KEGG: Achl_3374 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: A.chlorophenolicus # Pathway: not_defined # 2 77 120 195 310 85 55.0 5e-16 MPAALLGRLNDILAWNRAGHLPLAGHLDLEAPTRVADRPNQLKLLFLDKHMRDLYVNWED EAAVAVSSMRYVAAQFPP >gi|294970934|gb|ADNU01000049.1| GENE 4 2356 - 2763 264 135 aa, chain - ## HITS:1 COG:Cgl1319 KEGG:ns NR:ns ## COG: Cgl1319 COG1396 # Protein_GI_number: 19552569 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 18 125 31 143 325 87 46.0 7e-18 MATSFSVYTDGPVTELGEFLCSRRDRITPEATGINSYGRRRVPGLRREELAHPVGVTVTY VTRLEQGQSQDASDVIIGALARALQLDSDERAHLYALVHPAPKEHIRQRTPAIAKAGAER LLHAMGTCRPRSWGA >gi|294970934|gb|ADNU01000049.1| GENE 5 3076 - 3429 327 117 aa, chain - ## HITS:1 COG:DR1111 KEGG:ns NR:ns ## COG: DR1111 COG0789 # Protein_GI_number: 15806131 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Deinococcus radiodurans # 1 114 1 114 137 86 43.0 1e-17 MRISDVAARTGTTPRLLRYYEEQGLLDPARNTSGYRDYNDQDVETVRRIRTLLDAGLSTD TIRAVLPCLIERAGHLAPICSETITALQREQSRIEASIAALTTSRDAITQVINAAKP >gi|294970934|gb|ADNU01000049.1| GENE 6 3541 - 4686 841 381 aa, chain + ## HITS:1 COG:BS_yfhI KEGG:ns NR:ns ## COG: BS_yfhI COG2814 # Protein_GI_number: 16077921 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Bacillus subtilis # 4 368 15 381 397 176 34.0 8e-44 MVGFVVLVFCTGTAEYLVAGVLPQLANDMSVDVATAGQAVTAYALGVAVGGPIISALTVR LPRKGLALTLAGVFIAGTAITVAAPSFGWVIVGRVVSACTQATLFAIALMTATVAMGAQR QGRAIALVTSGLTVATVLGVPLGSLLGGSISWRTPFIIVAGMAVAAVAVVALAMPRTPAP STRVSDEFRTLLRIPVLLAVGTTVVGFAGVSVVFTYLVPLLSEVTGISPGAVPALLLAYG VGGFLGNLVAGHLTDHSLSKTLTGVFVSLAAVLAAFPLLAGAAGPMIMLVLALGLLSTAT IAPLQSLALRHAGEAPTLSLAVNVGAFNLANAIGAALGGLGVATGLLRWSGFGASLFALI GLALSVIALRATPSSPDSSTS >gi|294970934|gb|ADNU01000049.1| GENE 7 4704 - 5606 648 300 aa, chain + ## HITS:1 COG:lin0622 KEGG:ns NR:ns ## COG: lin0622 COG0604 # Protein_GI_number: 16799697 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Listeria innocua # 1 299 1 310 313 130 32.0 3e-30 MKAAAITTYGSLNALTILDLPVPTASPHEALIAVVSSTINPVDVKTRLPDTPQEVSTFPA VLGWDLAGVVVTAPPESAWRPGDRVIAMHPPQPTGHGCWQQYVTIDPNLLAAAPTNVDLI TATTLPLAALTADQALQRLNLRKGERLLVTGAVGSVGGMAVQLATLSGISVTALVSRPEH QTTAISLGATAAQSEFDSAHEFDAIFDTAGILGQPRLLKPGGKLVTVSDDRIPNALAERA RIADHNYVHHDPQRLGELSTLVTTGALRLRVAHHYPLSDIQNAHRTVEAGGLDGKVVISV >gi|294970934|gb|ADNU01000049.1| GENE 8 5711 - 6082 122 123 aa, chain + ## HITS:1 COG:no KEGG:Ksed_06540 NR:ns ## KEGG: Ksed_06540 # Name: not_defined # Def: DNA-binding domain-containing protein # Organism: K.sedentarius # Pathway: not_defined # 12 94 189 271 278 70 42.0 3e-11 MAAMQADLAHPWRLVELAEIAHLSPSRRRQLFVEILGMPPIAWPTLQRVRAMARTISATD TTTRQATAEVGWMNQAHAAKQFRKLTGRSPTEYRAKVWSQNEPVGICRWCGHPIKQPSSR ARG >gi|294970934|gb|ADNU01000049.1| GENE 9 6254 - 6445 136 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396154|ref|ZP_06806336.1| ## NR: gi|295396154|ref|ZP_06806336.1| GMP synthase [Brevibacterium mcbrellneri ATCC 49030] GMP synthase [Brevibacterium mcbrellneri ATCC 49030] # 1 63 1 63 63 114 100.0 3e-24 MGTSHGLEETAIRVEVRNELWTVEIPAGDGRPNEAHDYAAAPVGGTLAAGEDAKDVWCSR QRS >gi|294970934|gb|ADNU01000049.1| GENE 10 6555 - 7157 379 200 aa, chain + ## HITS:1 COG:STM1213 KEGG:ns NR:ns ## COG: STM1213 COG1309 # Protein_GI_number: 16764568 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 196 14 203 211 74 30.0 1e-13 MGRPRMFNEAAVLDAAAGEFRVHGFADTSTEQLCEAAGVRRSTLYNTFISKDELFVRALE RYLEATSAAQAEILECESLDGMERLRAFLDLMVEEEANAARHGHAAGCMVVAARMTPDLV RRDDRIGRLLDQGLEHQLSALSLVVRQGQADGSIAQDVTPRDAARLMVSLVWGVRVMAQS GTAAEELQVVTSLGLRALLP >gi|294970934|gb|ADNU01000049.1| GENE 11 7229 - 8392 699 387 aa, chain + ## HITS:1 COG:PA3336 KEGG:ns NR:ns ## COG: PA3336 COG2814 # Protein_GI_number: 15598532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Pseudomonas aeruginosa # 5 340 5 340 388 166 39.0 7e-41 MRKHLYLLMVTILIVMMSELQVAGMMPSIAADLGTSIGQVGLLVSMYSLGMALGGPAVAY VLRHVPPKRALLTVVGMYGVLEALLPVVHEYWWVALMRVLTGCLSGATFGLSVTFGAQLA QSPAKIGEAISIVLGGIMVGTVIGLPLSHYIAGVLGWQASFYFLSVAALCLLVASALALP PREPASPEDAAQDLRNLRSPRLWSRYLVSLLTIGAAYGSFSYFTPLLEHSAGLGRNVTTV VLLTYGVFSFVGNLVVGRFADRHAVAVLRIGHGLLIASLSVIAMFVTAAWVVVAMVLVVG LAGVTMNPALVTRVAEVGGTGNLVSTIHTSVITMGVTLGTAISALTMSGFGDDPAIAMWT GAGFAILAAGALTLQTAPRNTPATTNT >gi|294970934|gb|ADNU01000049.1| GENE 12 8707 - 8949 60 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396158|ref|ZP_06806340.1| ## NR: gi|295396158|ref|ZP_06806340.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 39 80 1 42 42 81 100.0 2e-14 MRRSSTASSQGGHQPSIGLRTAIEACGRVRGVGMSVSAMLAAEIMLMAHGCDEKDVLDSR VGLKCPGFDDDIQPGALQSS >gi|294970934|gb|ADNU01000049.1| GENE 13 9033 - 9428 539 131 aa, chain + ## HITS:1 COG:no KEGG:CPE0314 NR:ns ## KEGG: CPE0314 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 1 130 4 130 132 111 53.0 1e-23 MLIFAIAFITAALVFYTMGVWAEHKKKVLTWPHVILFGLGFVCDATGTEFMRRIAQSDSF SFGGEAAQILGLIMAVTGALALLLMAIHFVWALYVMIKGSDRARAVFHKFSLVVWGIWLV PYFTGMVGGML >gi|294970934|gb|ADNU01000049.1| GENE 14 9437 - 10384 746 315 aa, chain - ## HITS:1 COG:NMA1085 KEGG:ns NR:ns ## COG: NMA1085 COG0564 # Protein_GI_number: 15794033 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis Z2491 # 3 313 6 307 307 190 38.0 3e-48 MRSPLRPREGISATRLRAPGGNQTHSRQHEPVPATIRDWLLADFPESSEDLDYIADPHGG GLVDENGQPVTLETPVTPGGFYFFHRIVPPEERVPFDVTVVHEDEHLLVVDKPHFLASTP NGRFVRECVVTRLRVDRNEPDLVAIHRLDRVTAGLLILSRNPDTRGAYQRLFQDRKVDKT YEALAVLPPDFDPAAFPRECESRIEKDKGTRGVKEVDGPINARSRIEFSHVVGTYEGDPV GRFVLTPHTGKTHQLRVHMLGAGVPILGDPVYPHDLDQDPYDFSHPLRLCAVGLEFRDPL SGEERRFTSGIQLTV >gi|294970934|gb|ADNU01000049.1| GENE 15 10464 - 11381 598 305 aa, chain - ## HITS:1 COG:Cgl0948 KEGG:ns NR:ns ## COG: Cgl0948 COG2951 # Protein_GI_number: 19552198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Corynebacterium glutamicum # 79 290 26 248 254 166 43.0 5e-41 MHSEDKRYASSLQDSAEIPKVPTQPKGATKPKVAAKPKGTTKVATTSAGVSRWWAVPLMA MSIALVVLAGLLFVNLRADGAASEAEEVVEIPAPVAPSMPAVDPVTGGVAVDNPWLRETS EKSGIPQRVLQAYVAATVWAAQRSPQCGLSWNTLAGIGKIETDHGRYKGARVDDSGEVTP HLFGVQLRGDGTAHIRDTDGGQLDGDRTHDRAVGPMQFIPTTWNQFAVDGNGDGEKDPHN IDDAAASAAAFLCANNRNLTDVNGYTVAIKAYNPSDQYVRDVANEAQRIAQVVGQTAQSE QNRAI >gi|294970934|gb|ADNU01000049.1| GENE 16 11381 - 13243 1108 620 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396162|ref|ZP_06806344.1| ## NR: gi|295396162|ref|ZP_06806344.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 620 1 620 620 1076 100.0 0 MVALAFVPHVTPQPVYASEIFESRGDTLTLDTREWKSTGPVTLSVPAGAKVADSSDGAEP AGGTNPHTISDEVTFDGEHLPFAVQTKPSRPVSVQVKATPGTYCLSIHAHSLGKKEPRQH THTIRVESTDGTTTIDTDPADCPTDLDEKYRIKPPELGPKQHTVKAENTSAGYVAHADFD ARGLDGRVRMAFRHDGHGTMGVINPNRSQGGYIATRGDTFAYDISAPTIEPLHLTFSEPG THCVAYSMYGEDAKKPARNGMLTVTAQGAEVTDDRDADGRAEDGEASDGAADSQCAPTTP VPRNPAESPSDSHDTSTDDKGADNAEETGPGQEGDTSGNMPGQYGATPGVTVPTPAALPF QPVAANVCAPAGEGQMVDVTHGQVLISPTQVQVNGAERAPSTVNVTVPDSARTAFTPSTT QDKEFATPGSQVWATGGANAPAVGWSANDLDPALVKSMQVTLTRVSGPGNVIIQQKDALG KNTKNLRQGSQSTVTPGQFSTPTFMFNQPGAYDVEFETLTREVHGHERRVTVVLRFNVGK KLPAQVVGSPLGALIGHCQAASLTGDIVHANPPADPPQAAPVTPEVEGPSNWWWGVVGAA VLCSIALAILAASVWVRGDS >gi|294970934|gb|ADNU01000049.1| GENE 17 13273 - 14115 779 280 aa, chain - ## HITS:1 COG:BH1390 KEGG:ns NR:ns ## COG: BH1390 COG1108 # Protein_GI_number: 15613953 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus halodurans # 17 279 16 278 292 166 39.0 4e-41 MSVFDFFADLTNPLLVFLPKALMVATMASILCGVVGCFVVLRGMSFIGDAVAHSVFPGLA VAFVVGGNLVVGGAIAGIVTALLVAIFSQFRRLKEDSVIGVFFVAAFALGIVIISQSPGY AGSLTDFLFGSITGIPTSDVYVVAITACVVIAVLMVFLRDLVTVSIDREYARALGLRVFW LDIVLYIAVTLAIVVSIRTIGNILVLSLLITPAATARLLTDKLSTMMFLAPALGAVSAFI GLYISWTADFPVGGTIVLVLTSFFLLAWLFAPRHGMVARL >gi|294970934|gb|ADNU01000049.1| GENE 18 14112 - 14849 267 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 25 206 25 213 309 107 34 2e-22 MSAPDTTTVLDVRDLSTKLGGRLVLENLNLEISAGSFVGLVGPNGAGKTTLLRSILGLIP SRGKVTMQAEVGVGYVPQKHEFAWDFPISVEDTVLTGKRFKLWQRPTVEDYRAVNNALKQ VHLSEVKDRPVAELSGGQKQRVLVARALVSHPQLLVLDEPFTGVDVPTQELLTDLFISLA KEGTVVLMATHDLVAAMHTCTHIAMLKGNIRAYDSPHNLTDPQLWCDVFSLKPQSPLLTA LGVSA >gi|294970934|gb|ADNU01000049.1| GENE 19 14846 - 15841 1070 331 aa, chain - ## HITS:1 COG:no KEGG:Micau_4057 NR:ns ## KEGG: Micau_4057 # Name: not_defined # Def: hypothetical protein # Organism: M.aurantiaca # Pathway: not_defined # 15 300 12 287 326 205 41.0 2e-51 MKAIRLTAIACTLLAVGVVSPVATTVSSSVTATAAHATGSQPSGNGAEDEEEKLKQNVSD SEELSEDQATIDAGHVDIGPRLTDGKTELVARDDTTNPPVWRHLDKTVLKVVDQGGKIQM PDDEQYSFIPANAGDDVWVIPQVEQPGVVWLGWNTQNPSFVNEVDGNVTLSLRGVQGPGD LVVYLQNGGFGAPQIVWDDQQRDASVDLNTHTHANWVFTKPGEYLVKMSVSAKTTSGEKL EDTKTIRLAVGDQADVDKAASMQWEGSDDASNESGQNENSEDNTAAGKSDGNSALPLIAG GVGGVFLIAVISVAVMSANARKRKKAAGMDE >gi|294970934|gb|ADNU01000049.1| GENE 20 15838 - 17415 1245 525 aa, chain - ## HITS:1 COG:alr3576 KEGG:ns NR:ns ## COG: alr3576 COG0803 # Protein_GI_number: 17231068 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Nostoc sp. PCC 7120 # 357 520 142 310 325 109 36.0 1e-23 MIRRTFLAVSAVLVTVLAAGCQGSAYTHRNADQLQVVATTGIIADLVKNVAGDAANVVPL VPANADPHSYEPTLRDVRNIVYSDVAFSNYVMLEEHKLIKTLDANIPSDAPNIGLAEGAT KYSARVIPLVEDVTLDTVWLGLRVSGAGSELGADRSSEVRMKMTEVVAPSGGTVHGFLTQ ALGQNTLYFDSSDGARDSDMATLPVNAHTHLSWAFSKPGVYKVTFETHLATDPENETYIG KGTYTFAVGVDPHSDPQLKNKRIIDEGHADLTTDLDTKRLTVFADSEKETSSDLGESSYE RNVAGHDSLNPDDTVISVTNKAWQEIPRGSKFLGEPGSSTYLLPQAVLGKHVHGEMDPHL WHDVSNAIAYVKLIRDTLAHADPDNARTYEANAKRYVDRLDALDREVRDTLASIPKDKRH LITTHDAFAYLGAAYDVDIAGFVTPNPAVEPSVTDRIRLADTIQNLKVPAVFVEPQLGRS LTLRTVADEANVSVCDIYSDAFDSRVTTYEELMRFNAQSLKGCLT >gi|294970934|gb|ADNU01000049.1| GENE 21 17412 - 20081 1774 889 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0733_11002 NR:ns ## KEGG: HMPREF0733_11002 # Name: not_defined # Def: hypothetical protein # Organism: R.dentocariosa # Pathway: not_defined # 609 832 457 677 755 158 42.0 9e-37 MPFLGRAVAGFATSVALIASVLGTGAHAAPTDNTYTASSAPVCGADATGLRGDVPKIGKR NVVATEHADAVAMCIRGGKMHMFSKVDWAPSNGKYEHAREPANELLFHVSDALKQEIPAK GFEFTHAAGKRAWMIPQNQNHEGLWAGWNTQDIAEKDVKGGKVTMRLNQKKSQAPKGAHV EVFQTGWSGSNRIFSLTDPKHSSYEQIANAHVHANWVFTHPGVYRLVFDSSAVVNGKRVT GEQEYVFVVGDLNKAELEDLDKPKPAPQPTPEIPKPAPTSGPTTAPSAPATDKPAPSPSG KPGQPAPEQPSVTVEARADKDQYEAGDTAVLSATIDGGDENGLVSWERKASGSENWEPVE AAQGKELRIENLEATDSGTVFRAVYAGETRSNEVELKVGAGEPEAPEAPQEPEPSTSEAP SDEDNSEYDFTLTTTLDQDEYVEGQDARAEATYSQTSDNGGQPLKVAGKLVWETRASESE KWMEYKDGKKAVSSRQIIIPSVTKEFDGVQFRAVHTSGDERVESKPVTLTVNSKDDADGN GGSANAGQSGGTSANHNSAPAQAPVVCEPTAASGAAGQGTESNTGAGQGSNGSTGGGGGQ QAPAGQRVRVTDGHFDFGARLNGKRATAQVKDDRTSPPVWRNPSDVMFVLGDASKKKVPA EFGFLGKPGSDIYMIGQTQESQVPWLGWNTQDEQLVNNATKVTMRLDSLNGPGKLNVFVG GGGLGGGSIKHVFRNAGDSYDIPLRTHEHGNWVFSAPGNYTATVTFTVKLKDGSTTQATG TLNFEVGQSANAGAGNITPTGQTAPDQKADAQSGDQQGDQSTSDQATADANGGDSTASVS NADAGNMENCAHPSLPRTGVSGISAGLIGGGVLIGIGIVAVVSQRRRRS >gi|294970934|gb|ADNU01000049.1| GENE 22 20249 - 21847 1539 532 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 530 3 532 547 597 57 1e-170 MAKTLQFNDDARKALERGVNVLADTVKVTLGPRGRNVVLDKQWGAPTITNDGVTIAREVE LTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRNVAAGAAPGQLKAGVE AAVDAVEKRLKEIAREVADSKEIAHVAALSAQSPEIGELIAEAFDKVGKDGVITIDESQA SSVELEFTEGMQFDKGFLSPYFVTDADRQEAVLSDPYILIHQGKISNIQDLLPVLEKVQQ AGKPLFIVAEDVEGEALSTLVVNKIRGILNVAAVKAPGFGDRRKAILEDLAILTGGQVIT ADMGMKLDQITLDQLGTARTITVTKDNTTVVDGGGSQDDVDARTAQIRGEIENTDSSWDK EKLQERLAKLAGGVAVIKVGAATEVELKERKHRVEDAVSATRAAIEEGVVAGGGSALIHA AKVLDGNDLGKEHDAATGVNIVRRAIVQPLRQIAENAGQDGYVVASKVAELEAGQGYNAA TGEYGDLIAQGIIDPVKVTRSALRNAASIAALVLTTETLVVEKQEDNDEDDK >gi|294970934|gb|ADNU01000049.1| GENE 23 21890 - 22183 500 97 aa, chain - ## HITS:1 COG:Cgl0581 KEGG:ns NR:ns ## COG: Cgl0581 COG0234 # Protein_GI_number: 19551831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Corynebacterium glutamicum # 2 96 8 102 104 123 65.0 9e-29 MSVAIKPLEDRIVIRQLEAEQTTASGLVIPDTAKEKPQEGEVVAVGPGRVADNGNRVPVD VNVGDKVIYSKYGGTEVKYQGTEYLVLSARDVLAVIG >gi|294970934|gb|ADNU01000049.1| GENE 24 22453 - 23391 577 312 aa, chain - ## HITS:1 COG:ML0239 KEGG:ns NR:ns ## COG: ML0239 COG0084 # Protein_GI_number: 15827035 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Mycobacterium leprae # 21 303 2 255 262 159 40.0 6e-39 MASRAAGEYPPVPEPLAVPAVDTHTHLDMCTGARGPIKSGEPAPEVEPEEDETFPPLDFF YDTAMATGVTRIVQIGCEMGAARWTARVVEEQAQAGRDWMLGGVAIHPNEAPRLARAGIL EESLDEIESLVTSHDRMRVVGETGLDFFRTDADSARDMKAQEESFRAHIEIAQRNGLTLQ IHDREAHADVFRVLRDTGVPDRTILHCFSGDAEMAREAGKLGIFCSFAGNVTFKNAHGLR EAAEVVPPELLLTETDAPFLTPHPHRGKPGGPYMVAHVVRTLAQVRGVSEEELAERVTAN AVRAVGSWELTL >gi|294970934|gb|ADNU01000049.1| GENE 25 23391 - 24974 1361 527 aa, chain - ## HITS:1 COG:BMEI0987 KEGG:ns NR:ns ## COG: BMEI0987 COG0143 # Protein_GI_number: 17987270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Brucella melitensis # 3 517 35 542 544 639 61.0 0 MTFYMTTAIAYPNGAPHIGHAYEYIASDTIARFKRLTGEDVFMLTGTDEHGLKMQQSAQK AGITPRELADKNAAGFRALHDALGSSYDRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTY AGWYSVRDEAYYAADETEVREDGERYAIATGTPVEWTEEESYFFKLSAYEERLLEWLDSV DDTGRHPVGPDVRRNEVVSFIKGGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYL TGAGYPNVDSEEFQQRWPCELHVVGKDILRFHAVYWPAFLMSAGLELPKRVHAHGFLFNK GEKMSKSVGNVVDPYDLVDAFGLDTLRYFLLREISYGQDGSYSAGAIIGRKNADLANEYG NLVQRSTSMVAKNLSGVVPEVSEADLTDDDRALLERTDGLLERVTAFVDVQELHRYVEAL WRVLEETNRYFSAQEPWKLKKTDPDRMGVVLYVTLEVLRRVSILAQPVMPESTGKVLTQL GVAEDARTFNDFGQWLPAGTELPAPAPVFPRYEAPNEGDAGTAGGAK >gi|294970934|gb|ADNU01000049.1| GENE 26 24993 - 25832 611 279 aa, chain - ## HITS:1 COG:MT1032 KEGG:ns NR:ns ## COG: MT1032 COG0313 # Protein_GI_number: 15840431 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 1 279 1 276 285 217 43.0 2e-56 MTDPALVLVGTPIGNLDDASPRMRAEIEAADVIAAEDTRRFMGLATRLGITYSGTLISLF DHNERSKASEIAQQIENGARVVLLTDAGMPAVSDPGYHVVKEVVSRDLPVTAVPGPSAVF TAIALSGLPSDRFTFEGFVPRKAGERGRLLTDLASERRTMVFFESPHRIHTTLADFVTRF GADRPMTLSRELTKTYEETLRGTTQSIHEQVVARDGLKGELTLVVAGAPEVSDTSAAELT EDVAQLVESGMRAKDAAAHIAKIHGLKSRDVYEEYIHTK >gi|294970934|gb|ADNU01000049.1| GENE 27 25895 - 26554 445 219 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396173|ref|ZP_06806355.1| ## NR: gi|295396173|ref|ZP_06806355.1| HesB/YadR/YfhF [Brevibacterium mcbrellneri ATCC 49030] HesB/YadR/YfhF [Brevibacterium mcbrellneri ATCC 49030] # 139 219 1 81 81 109 98.0 1e-22 MSSNTPSSHEGSSRPYNDLPSYGSGPSSSSQGPASFKPGASHGSGGSAYGSATPGVESSG SAAYGSAAYGSSPSDYGNSQSGTYGGGDYSPGNYGASASEPANPASAYNPAPTYDAQSSP YGAPYGAPGYPVRRGTNGLAIAALITGIVSLMATWPFGLVGIAPVIMGHIAVKQCKERGQ EGKGLAIGGLVTGYIAIGGFILIILFFILMLGLAGLASS >gi|294970934|gb|ADNU01000049.1| GENE 28 26650 - 28164 1289 504 aa, chain + ## HITS:1 COG:ML0192 KEGG:ns NR:ns ## COG: ML0192 COG1928 # Protein_GI_number: 15827001 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Dolichyl-phosphate-mannose--protein O-mannosyl transferase # Organism: Mycobacterium leprae # 12 503 21 509 510 267 34.0 4e-71 MLSHDALRNPIGWVVAAGLAVIAAILRMIGLGHPKELIFDETYYVKDAYSLWKYGTERAW PEEPNPDFVAGNPMPLDDPGYVVHPPLGKWMLSVGQMIFGQDSSFGWRFSAAVVGALTVF IIVRLAIRLFGSVWMGCIAGLLLMTDGEHFVHSRTALLDLFLMFFVLVAFWLLVIDRDHA RSRMVELTTGSTHKESADLSTFGPHLGWRPWRLAAGVALGCAMGVKWSGLYALAVFGIMI VVWDVRNRYAARVKYPVRGMLVRDSVPAFMSLVPVAFIAYVLCWSGWIFTSNGYDRHWAK EHQGWWSWLPDWIPSLAHYHHSAYKFHVGLSSEHPYASNPWGWIVQWRPTSFYYRSPEPG QNGCVWDKCSAAITSVGNPALWGVAAVALVIVILAWLVRQDWRAGGIAAGMLATWGPWFT YQDRTIFTFYTIVMVPFVVLAVTYCLGLVWGRGRLTASLRARRATVGVFLAVAVLLFAYF WPLYTGTTVPYDSWRQHMFNPSWI >gi|294970934|gb|ADNU01000049.1| GENE 29 28254 - 29435 925 393 aa, chain + ## HITS:1 COG:MA3766_1 KEGG:ns NR:ns ## COG: MA3766_1 COG1083 # Protein_GI_number: 20092564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-N-acetylneuraminic acid synthetase # Organism: Methanosarcina acetivorans str.C2A # 11 234 5 225 227 119 32.0 8e-27 MTTQQTTPSTVAIIPARGGSKGVPLKNLQKIAGKSLLARAIESAQATHGIDLVVVSTDHD GIAAEAERHGATVVRRPDAISGDTATSESALIYTLEQLEKLRGTQFDITVFIQCTSPFIN PQNMDNAIARVKRNAADVVFSAVEDHSFLWTLDEAHHAVAVGHSMDYRPRRQDRQKHFNE TGAFYVMRTAGFIERNHRFFGRVEIEEVPPEDAREIDTMSDLTLLRAMAAGRTETTHLDI DALVTDFDGVHTDDAVHVDENGVESVRVHRGDGMGVSRLVKAEFPFLILSKERNPVVTRR AEKLRVEVAQGIDNKAQVISEWMADKGLDPERVAYVGNDINDLEAFSAVGWPIAVADAHP KVLAAARFVLKKNGGHGAVREVCDLVSIPEATQ >gi|294970934|gb|ADNU01000049.1| GENE 30 29493 - 30374 970 293 aa, chain + ## HITS:1 COG:MJ1065 KEGG:ns NR:ns ## COG: MJ1065 COG2089 # Protein_GI_number: 15669254 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sialic acid synthase # Organism: Methanococcus jannaschii # 5 290 1 277 337 211 40.0 2e-54 MTAEIKPVAIGEHTLGAGHPVYLIGEIGINHNGDVEIAKQLMDVAKKAGAQAVKFQKRNP DVAVPEDQKSKPRSTPWGEMTYLEYKFRVEFEDAEYAEIDAYAKELGLQWFASPWDIDSV NFLEKFNAVTYKIASASITDIPLLEAVRDTGKPVIMSTGMSTLEQIDKAVEVMGKDNLVL MHATSTYPLPPEEVNLLAIPALRERYGVPVGYSGHEIGTAISAAAVALGAVTVERHITLD NEMWGSDQKASMEPDEFIKLGEEIREVTTALGDGKKRVMPGEESKIASLRVVK >gi|294970934|gb|ADNU01000049.1| GENE 31 30433 - 31425 666 330 aa, chain + ## HITS:1 COG:YPO0187 KEGG:ns NR:ns ## COG: YPO0187 COG0463 # Protein_GI_number: 16120528 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 1 217 1 216 329 96 31.0 5e-20 MSTPELSLIIPAMNAAPYLSTLFTSLHKQGDMSKVQIIFINDGSSDDTPLLLDEYGAQFP HFEVVTNATNVGLANGRNQGLDRAKGDYIVFLDGDDWLADNHLPTLLDAAKALDVDFIRC DHVTVTGNKRVLKRAPMALRNRPLNPRYGILPVHDSTMVDYPYAWAGIFHRRVKDSGMLY FPKDFMTAEDREWIWNLHLNADSFAVVDAPGILYRRDVAGSLTQIVDERQLMFADAFEGI FRLVEADRDADMWWQKAARNWLAIVQAQVERFSLSPQVMKNKLYEKSRTVSAMVPKDVLL REFAQSKPNRQHAVLPALGLTKDALKELIK >gi|294970934|gb|ADNU01000049.1| GENE 32 31422 - 32852 974 476 aa, chain + ## HITS:1 COG:no KEGG:SCAB_35061 NR:ns ## KEGG: SCAB_35061 # Name: not_defined # Def: hypothetical protein # Organism: S.scabiei # Pathway: not_defined # 3 436 4 416 444 338 46.0 2e-91 MKQIFLASTLFQVAGLAAGIDSGVYDSAVTPAASLEGPGAPDALFETPSERILLLSNNAV VLEAATPIDEAPGAASLLTRFDRVIYLNDFVAPNHPNSWAPRTEDLPLWETELRSRWQLG DETIELVVESPQVNPAIALGRIFHTAMIRVHSDGLMSYGPTRNFIPLANGQRMSSLHYLP LVEGLVPRLLNEYEITPIALDRQAFVKVVDEIARDTDLGLSDEIKALDSSTTAMAFGQYL SALGILTPQEEHDLHRDFVSAAHEAGMTAVVFKPHPASPPDMVQALGAYAHELGIGFFVY SSPVIAEVAVAVLKPALVIGCFSTALVTARALYRIPAKAVKTDLLLERITPYQNSNRIPV TIADATLDGSNAELSTEQVKELQALVDSVSYAMQPEIAFRLRETAQDFLSKRRGSNTMKY FKKRRLTSLDLPGGLPKRNRPRTVLRKSLSAGKTLARETYKSFQKRQSAKRDAVED >gi|294970934|gb|ADNU01000049.1| GENE 33 32854 - 35007 1096 717 aa, chain + ## HITS:1 COG:no KEGG:AARI_34200 NR:ns ## KEGG: AARI_34200 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 308 717 3 413 414 267 40.0 1e-69 MIAIVESPLQFLAALETHKASTLFCYDSATMRDFVEKLPLSFLADITVKWGLPPTRTFTA AQNVIVGDLNSGSFQLLLVRARGKLPALTVVDDGRATITAFENVVSKAPLVRSRVSNSVV RTGLGHVASRILYAHAQRGHITWFTALTLNDSLRTRVENAGVRIESHSFSTIRSFPWDDL PTSGPFVIGSAMVADGVIDEDSYFCWLENLGLDQFAYIAHRRESSAFLNRVGSIPGATVY AAGLPVEIRLSHAQAGSEVYSLPTTATETLPLTMDAPKIKTTFVPDDWWKPNVTMKTKME LNTAVNRATTKPILVSISDSESYLKWSASLLDQLREDFDVHVWLVDNPILPTGEQIANAL AGSDFSSAHVPVVKNSELKVALEDLRPDVILAAATGPIVQVIYSTAAFLSHRPGLVSGLP GVGLPATSKGQRYRRLGDMFITHSAFEKERYEQVLTDCRFPVEVVVARLPMLKSKKPPRA RFTPGDIPTRLVFAPQAKVPVEKDEREQILLSLNRFARNFPKSSVIVKVRSRPGEQETHH EEHSYTALLEDLEREGKVIPGRLSVEVGPMSDFLEPGTALATVSSTAALESLDRGLATLI IADFGVNEDMLNEAFADSGIAQPLSDLERSDFRFPSEAWLTANYFQPFTDELPHALQLLA KRARAQQLPDIRTGALQQNYRGLRATVRSRTPKPVVQAYRLVRREMPQRVRDGLSKL >gi|294970934|gb|ADNU01000049.1| GENE 34 34907 - 36397 1017 496 aa, chain - ## HITS:1 COG:no KEGG:SCAB_16841 NR:ns ## KEGG: SCAB_16841 # Name: not_defined # Def: integral membrane protein # Organism: S.scabiei # Pathway: not_defined # 17 448 19 422 478 146 29.0 2e-33 MSFSKHNKALLWDVGLLLLCLAIAAVTFLGFYPGRAEYDISEQAKQMLGMKNLSDWHPPI VAILWRGLYAVTGKLGSLLAFQLGIYFLAVFLLAVFAHRILKSKWASLAMIAILVSPWAY SQLAVMWKDTIMAALLLFAAGCLALVTPKNKKTLWFIVPAVSLLVFATVVRKNAAPAVVP MCIFIGWRLAPLFAPKLRNLIPKLREGRSKQFISAFIMGCVIVGFVGASAVSLDGAIARK WNVKPTHQIYQVILDDVMFSVPENELNESAAPQELKDKINKARPKCYEMNEPYDAYWNCY GRGSSGSDYSPLGYRDELKQLWLDHVITHPQRYVEYRWSVYKFYLTTSRLIYFPNKVVKP AKEVGFRKGSTKFDKVAKFYVVDFGADTIGFVFKPWFWLLAGAVISIGAWWSGRSRAFAL MLTSSAFLYVFAYFPVIPANHFRYTYWPALAVSVAFIAVVAGSVKAWKDRRERAGAFRAS QGDTLEPRVLESSSAR >gi|294970934|gb|ADNU01000049.1| GENE 35 36406 - 36885 360 159 aa, chain - ## HITS:1 COG:MT3377 KEGG:ns NR:ns ## COG: MT3377 COG2246 # Protein_GI_number: 15842867 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 147 44 192 256 79 30.0 3e-15 MPADSQKWRSLLVEVMRFLMVGGAGYVVDVGLSNLLVYGFLGIPATMPGSPVKAKIISTI ASVIVAWLGNKLWTYGDRTTGSNVRGFILFVVVNAIGMVITVLPLGVTWYLLNLRDPISY NISTNIVGIALAMAFRFYAYRTWVFKEADSPRAVKIEEK >gi|294970934|gb|ADNU01000049.1| GENE 36 36886 - 37854 613 322 aa, chain - ## HITS:1 COG:sll1457 KEGG:ns NR:ns ## COG: sll1457 COG0463 # Protein_GI_number: 16330076 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Synechocystis # 6 308 7 310 318 317 50.0 3e-86 MTVDLSTYKIAAIVPCHNEEVTVRKVVTDLKAAVPSMDVYVYNNNSSDRTVEEAIAAGAI VRHEERPGKGNVVRRAFADVEADIYVMVDGDDTYEASHVPDMIEMLVNGPYDHILGVRRD TNPESSYRAGHEFGNRMFNVITSKLFGTHVSDMLSGYRVFSRRFVKSFPAVSKRFEIETE LTIHMMSLRLPCAEYSIDFRDRPEGSESKLSTVSDGFKILGTIAQMMRHERPNLFYGTLA LLMVIASLVCGVPVIVEFMNTGLVPRFPTALLAVALMIIAAIFATVGIIGDALRRVRRES ARLHYLELLPPKKTVGLSGSSS >gi|294970934|gb|ADNU01000049.1| GENE 37 38093 - 40150 1267 685 aa, chain - ## HITS:1 COG:mlr2124 KEGG:ns NR:ns ## COG: mlr2124 COG1835 # Protein_GI_number: 13471978 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Mesorhizobium loti # 4 683 5 657 658 249 30.0 2e-65 MRKFRPEIQLLRAIAVLAVVVYHIQPSWLPGGFVGVDVFFVISGYLITAHMLKEVESTGR LSLSQFWANRARRILPAATLAIVVTTIASLLFLPVTQLDTVTKQAVASAVYVQNFALAAQ SVDYLGQGEAATPFQHFWSLSVEEQFYVFWPLLVVLALWATRRLQNRGRHSADVFRRRFR LIAFVCLVSFVWSVVSVGAGDPAAYFITPTRVWELGIGGLLACVLGDPQKFNSARKAMAI VGVAAIGVACVTYTGEVPAFPGASALLPTVATVAAGWTTGLGSMGPIVNWKPVQLVGLWS YSLYLWHFPVVVFFRERNGRPAEGVTEFIALFAVSLALAMLSFYYVEQPLRVLPFLKKSN RRALIAAGVAVAVTAAVGVTPVAKQQAVLALEKRATERLVNDPDLPTGRASLHGESYNTF IEGYENVFLPALPEAKDAQPRYPCDGVPAGRDEAETKECIVANPDGKKTVAVVGDSHASQ WVPALEKIVEGTDWKLVVYIHNSCPLSLEPRGLEKRKELRCTEPNKETIERLIESKPDRV ITTNLKVNDYAKVGSEEHAGTSGFVKAWKPLVKAGLRVTVLHGTPAFGTKTFIPDCIAKH EKKGDLEKCGRKRSEVGEDSGTNAAMKAAVEELDNVDFINLTDSFCTKKECPAVIGNVIV YRDAHHISTTYIETIVDDLEEALKL >gi|294970934|gb|ADNU01000049.1| GENE 38 40226 - 42289 1271 687 aa, chain - ## HITS:1 COG:mlr2124 KEGG:ns NR:ns ## COG: mlr2124 COG1835 # Protein_GI_number: 13471978 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Mesorhizobium loti # 1 674 12 650 658 256 31.0 7e-68 MRALAVVAVVVYHINPAWLPGGFVGVDVFFMISGFLITAGILNRIETTGQFSLMQFWANR ARRILPAATVTIVVVSILSVWFLPLTRLKDVATQGVASALYIQNFALARQSVDYMAADAK PTPFQHFWSLSLEEQFYVVWPLLVVAAGLIAGQVLRKYPTGFYQHRRRFRGITVVFFSVF VAVSFVASVVHVSSGDPAAYFVTWTRLWELGAGGLLACVLIEWTSHPWLRLALQWGGIAA IVISTVMYSSATPFPGVAALLPIAGTVAVIAAGTTSGVGSPDRVMRLAPIQRVGDWSYSL YLWHFPVVVFAGARIDGGITALGGLLVFAVSLVVACASYYLVERPILSWTWLKARNAHTV VGAVAVAAVGAVVAVVPGWVSAHELRQQNLRDDVLAAPTVDLPTKLAPGFGSLREYDYDV FFGEDTTIEPAPISARESEPKFPECSFEVPVPVSEKRTRDCAIAGSDGGRTIAVVGDSHA AQWVPALRKVVEGTDWKVVVYLRQKCPFTVGEFNAEQAGGLKCQDANRDVLERLKKDRPE VVLTSGLVRGDAVAQDAEKVPGTKGFADVFRELSSEDIKVLAFVDSPNPPGDMPECVSEH MDDPSACDFKRSDAKLDQGTNAAMREAAREVSDVELVDTADAFCVEDVCPAVAGSRLVYR DTNHVSPAYAETLEPWLGTIIDVIVRH >gi|294970934|gb|ADNU01000049.1| GENE 39 42551 - 43591 1064 346 aa, chain + ## HITS:1 COG:BMEII0337 KEGG:ns NR:ns ## COG: BMEII0337 COG1135 # Protein_GI_number: 17988682 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Brucella melitensis # 1 237 30 266 369 243 54.0 3e-64 MIELRDLRKEFAGAPALDGINLTIPDGQIHGIVGRSGAGKSTLIRCITGLETPTSGTVTI DGTAITGQSASGLRRARRSIGMVFQHANLLDSLTAQGNVEHPLKVAGVPAAKRKARAQEL LELVGLNDRANNHPAQLSGGQRQRVGIARALATEPSLLLCDEPTSALDSQTTSQILQLLR SLRDRLGITVLIITHEMSVVREICDAVTHLVNGTIAHTGTLESVLSEPASPLAKSLIPLP EGTDITGTLEVALPATSVTGPEAGAGTVSGVFEAASQAGVPISAVQAGTVEVIANRQVGR LRVSTQRPEDLPRLSQALQQAGYTVGGTTSANNAHNNGKEANDVAE >gi|294970934|gb|ADNU01000049.1| GENE 40 43578 - 44240 796 220 aa, chain + ## HITS:1 COG:BMEII0336 KEGG:ns NR:ns ## COG: BMEII0336 COG2011 # Protein_GI_number: 17988681 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Brucella melitensis # 12 220 18 226 230 172 50.0 4e-43 MWLNNPVIANELWPAFCETLFMTLLSALFSVVLGLPLGILLWRTAKNSLSPNPVLYRILS TIVDIGRSIPFIILMIALIPFTRFMVGTALGWYATVVPLTVGAIPFYARLVESALREVST GKIEAVTMMGASRGQIIRQVMIPEALPGLVSAATVTTVTLVGYTAMAGAAGGGGVGALAI SYGYQRYQGDTMLVCIIVLVALVGVLQFVGDRIAHAVDHR >gi|294970934|gb|ADNU01000049.1| GENE 41 44356 - 45192 1089 278 aa, chain + ## HITS:1 COG:FN0658 KEGG:ns NR:ns ## COG: FN0658 COG1464 # Protein_GI_number: 19703993 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Fusobacterium nucleatum # 1 278 1 261 261 234 48.0 1e-61 MKLRIAAAVAAASLLLTGCGLAGGDAKEVGKKNGDITTLTVGVSPVPHGDILKFVDENLA KDAGLDIEIKEYTDYTLPNRALVDGDLDANYFQHKPYLDTEVEGQGYKIHGFEGVHIEPI ALFSKKVKSVDELPDGGTIGINNDPANQGRALDMLAKEGVITLADGKDATTATIHDIKDN PKNLKFQEADAAQLARTLDDTDASIINGNNALEAGLSPTKDSILVESAENNPYANFLAVR DGDQDNESIKKLDELLHSPEVKKYIEDTWTDGAVLPAF >gi|294970934|gb|ADNU01000049.1| GENE 42 45361 - 47100 1586 579 aa, chain - ## HITS:1 COG:SPy2085 KEGG:ns NR:ns ## COG: SPy2085 COG2759 # Protein_GI_number: 15675843 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Streptococcus pyogenes M1 GAS # 4 579 5 557 557 601 55.0 1e-171 MSIDLEIAHKATIRPISTIAAKLGLNVEDIVPFGHDKAKVPATTVTRDREAADSSTPSTT PAKLVLVTAMSPTPAGEGKTTTSIGLADGINEVAHEENWDVPEGKTPAVLALREPSLGPV FGMKGGAAGGGYAQVLPMEDINLHFTGDFAAIALANNLACAALDNHIHQGNTLGIDPRRV EIRRVVDLNDRALRDIAIGLGGYNNGMAREDHFDIVVASEVMAVFCLATSIADLKERLGN IVVARTFDKKPVTVADLEVAGSMAALLAKGLSPNLVQSIEGTPAFIHGGPFANIAHGCNS VLATTAAMNYGQYAITEAGFGADLGAEKFIDIKCRAAGIFPSAAVIVATVRALKFHGGVA KADLENENVDAMRAGLVNLDKHIANVRDVYGVTPVIAVNTFPSDTDAEHTALLEALKERG VEASLARHWAEGGKGATDLARKVIAVAEAADTSGKEPQFTYPLDATLEEKITTIAQRVYG ADRVELPKKVRNKLALFAEDGYGDLPVCIAKTQYSFSTDATELGAPTGHVLEVADVRLSA GAGFVVVVCGDIMTMPGLPKKPAANTIDVDDGGNISGLF >gi|294970934|gb|ADNU01000049.1| GENE 43 47158 - 47922 508 254 aa, chain + ## HITS:1 COG:lin0680 KEGG:ns NR:ns ## COG: lin0680 COG3152 # Protein_GI_number: 16799755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 108 240 5 125 140 68 39.0 9e-12 MSNYPQYPNTPGSGNSPQPGGNSPYASGAPGQSHNYGNGQPYGSQPAGSAGQQPYGSQPA GGAGQQPAYGNSYANQGMGGGMPAGFGQPGPDGTVPLNQPHYGASIKEATMRFFKKYARF NGFASRSEFWWPVLSLIIIQFILMIPYIIGIVMVSAGTATAASSYSSTGTAGGGGAATFG TILVFLSGGLLFLFGLAVIVPSIALAVRRLHDAGYSGWWYLLSLAPFGSIVVLIFCAMES KPEKWQPEWYDQNA >gi|294970934|gb|ADNU01000049.1| GENE 44 47952 - 48083 125 43 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396190|ref|ZP_06806372.1| ## NR: gi|295396190|ref|ZP_06806372.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 43 1 43 43 81 100.0 2e-14 MFSSKRGGVHKDLMLILRGHFACMAVYTLLFGYVAKHEWEPLL >gi|294970934|gb|ADNU01000049.1| GENE 45 48082 - 48681 522 199 aa, chain + ## HITS:1 COG:mlr4394 KEGG:ns NR:ns ## COG: mlr4394 COG3152 # Protein_GI_number: 13473705 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 58 190 78 189 199 59 37.0 3e-09 MSQYDYGQPQATPYPQPHAHTYVSVPPGFGHPGPDGTVPLNQPWYGIGFMEANKRFFKKY VRFNGFASRGEYWWSFLGLTLIGLIPSVIFSIGYIMVFAGILSAAASASYDGSGAGGVVT SGLGFVFLLVGGGLTSLISFATFLPSLGASIRRLHDAGYSGWWYLLIFAPFGTFIIVVLL AMPTNQEKWQQDWFDTSEG >gi|294970934|gb|ADNU01000049.1| GENE 46 48782 - 48997 222 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396192|ref|ZP_06806374.1| ## NR: gi|295396192|ref|ZP_06806374.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 71 1 71 71 72 100.0 1e-11 MQPYKSDAWSTDLYGLPSGPNTEPRPSPAPLHGPLARPRKRPRARLAVTSVIIAASVLVV AVVCLALFLAR >gi|294970934|gb|ADNU01000049.1| GENE 47 48974 - 49429 464 151 aa, chain - ## HITS:1 COG:PA3470 KEGG:ns NR:ns ## COG: PA3470 COG0494 # Protein_GI_number: 15598666 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 19 151 20 142 152 90 45.0 9e-19 MKSITVSALVIQHPSEPALLMVRKRGTTSFMLPGGKPEPGETAQDTVVREIREELGLRLD ANQLFFLGTFTAPAANEAQHTVTGHIFVCETVPADLNVDAPQCLHEIEEIGWFSYEQLPP DTDARQFAPLTRTRVIPALMQRSGSAGEEQG >gi|294970934|gb|ADNU01000049.1| GENE 48 49489 - 50868 1488 459 aa, chain - ## HITS:1 COG:DRA0343 KEGG:ns NR:ns ## COG: DRA0343 COG1012 # Protein_GI_number: 15808002 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Deinococcus radiodurans # 4 453 15 462 477 407 46.0 1e-113 MSEYKVVNPANGETVKEYPTDTDDQIKDALERSHKEYASWKTTPVEQRVEVLRKVAAIYR ERSEELAKIIQTEMGKVIPAGQGEVEISARIYEYYADNAKAFIEEEKLRGANDGDAYLLR KPTGSILGIMPWNFPYYQVARFAAPNLALGNTILLKHAPQCPWSAEVMEQIFQEAGLPAD AYINIYATNEQVADVILPDPRNQGVSLTGSERAGKAVAAEAGKNLKKVVLELGGSDPYVV LDTPDVAKTADLLFNTRMGNMGQACNSPKRMIVMEDIYDDFVSSITQAAKDIAVDNPWED PGTLAPLSSTGAKERFTEQVKATVAEGATLLAGGEDYDGPGAWVRPVVLTDVKKGSRGYY EELFGPAFMVFKVSSEEEAIELANDTQFGLGSAVFSSDSARAEKVGSQIDSGMVFINTPE ESREYLPFGGVKRSGIGRELGPLAMDEFANKQLFFKKNA >gi|294970934|gb|ADNU01000049.1| GENE 49 51038 - 51388 481 116 aa, chain + ## HITS:1 COG:DR1340 KEGG:ns NR:ns ## COG: DR1340 COG3631 # Protein_GI_number: 15806357 # Func_class: R General function prediction only # Function: Ketosteroid isomerase-related protein # Organism: Deinococcus radiodurans # 2 116 5 120 120 70 38.0 5e-13 MDIRQLALNYYETVDKGDPEATSDLFAQNATYDRPGYDTFKGEEIREFYRNSRVIESGAH TVNMVVVEGFTAAVHGTFDGVLKDGSEAHEGFADFIQFDGDGLIAARRSFFYRAAV >gi|294970934|gb|ADNU01000049.1| GENE 50 51431 - 52291 785 286 aa, chain + ## HITS:1 COG:DRB0077 KEGG:ns NR:ns ## COG: DRB0077 COG3375 # Protein_GI_number: 10957512 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 27 277 14 250 261 106 33.0 5e-23 MSTTSSAVLALAENELAHAQEVANVTMRELHDAHEAAEASLLLDNVWNVGKAGTTQLEPG LIVALAHSGNYVGGAFDNDTNELIGVTVGFFGRPLGKSMHSHIAGVRHDQVGRGTGAAMK LHQRLWCLNHGIMQMTWTFDPLIARNAAFNFRKLGVYFVDYYEDFYGQMRDGVNAGQASD RMMVSWSLDRAPKETSSKRLDEIDDLDMNYALHVGDSGEPVESDVPRSTTYAALQIPADV ETLRGADAELAGQWRHALRRGIVQLTQDGWDLAGLRKDNTYIFTHD >gi|294970934|gb|ADNU01000049.1| GENE 51 52331 - 53959 1751 542 aa, chain - ## HITS:1 COG:AF0262 KEGG:ns NR:ns ## COG: AF0262 COG0318 # Protein_GI_number: 11497878 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Archaeoglobus fulgidus # 2 540 4 545 551 531 47.0 1e-150 MLKGRASTQGDNFPLNLTTFLTRSVAVFPEREIVHRTIDGEWKRSNYAELGRRVKKLANV LGDLGIGPGSAVGVLDWNSMRCLELYFGIPAVAATLVQLNLRLATHDLEYVVSHSGTETV FVDESLLPIAEQLAPKVYVKKWIVMTDKPSSEISTTLDNVVFFEDLMAEASEEYDFEFVE ENTAAFAGYTTGTTGRPKGIFYSHRSVVLHALNLCQILSVTEADTVMPWTPMFHVMSWGF PQAGVAVGAKMVLPGKFSANDIAEVAPALVTEEVTLANGAPAIFAPVLDYLKTLDNVPDL SRLRLVSGSTAPALALIKGFKEVAGANVIHAYGASETTPLVTANVRTKPGSTLTEEEEWD LKRSQGLPSLLVEMKIVDPTGKELPRDGKSAGELLLRGPWIAESYYKLDDNSDRFMDGWW RSGDVGVIEPTGHLRLTDRLKDVIKSGGEWISSIDMENSILDNAKILEAAVIGVPDPKYQ ERPVAYVVPRPGNTVTEDDVYTTLSERFAKWQLPDKVIITDELPRTSVGKLDKKLLREQW NG >gi|294970934|gb|ADNU01000049.1| GENE 52 53952 - 54722 719 256 aa, chain - ## HITS:1 COG:MT1174 KEGG:ns NR:ns ## COG: MT1174 COG1024 # Protein_GI_number: 15840582 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 4 252 14 267 268 158 40.0 1e-38 MSQGVLTDLTDGILTIQFNRPDAMNALHLEAFLALEDALANLDPEVRAVIVKGNERAFCS GADVSLMSPGQGSLGMEKITRLMQTYRNVEVPVIAAVSGPAAGIGCSLALMADYVLMSEK SYLMLAFTRIGLMPDGGATALVAASAGRHRALRMALTAEKLTATSAFEWGLASEVVAPDL LDTRAGEVAATFAKSATVALGRTKRAINDATLTELDAALGREAEGQDALRTTEDYAEGVA AFLEKRPAVFKGVNRA >gi|294970934|gb|ADNU01000049.1| GENE 53 54739 - 55701 902 320 aa, chain - ## HITS:1 COG:MT3228 KEGG:ns NR:ns ## COG: MT3228 COG0604 # Protein_GI_number: 15842717 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 1 318 1 319 323 278 51.0 7e-75 MKAVQLPELTGPQALKVVDADIPEPPAGCVVVEVHTAGVTFPELLQTRGMYQTKHQVPFI IGSEGAGTVHAVGKGADFQVGDRVAFITDKGAWAQYAVAPATHTVKLPDEVSFEAAAGMP MNVLTADFALRHRGKLQAGQSVLIHGAAGGLGSALVQVALAMEAEVIAVVSTEEKAAIVK ELGAQHVVLADGFKDRVKEIKPRGVDLVADPVGGDRFTDSLRCLATYGTLLVLGFTAGGI PEVKVNRLLLNNISVAGVGWGAATVPNPGLIDEQWQTLLPHVKAGKLNPRIHATFPLEDA SAALAELDNRSVMGKILLTP >gi|294970934|gb|ADNU01000049.1| GENE 54 55876 - 57285 1310 469 aa, chain + ## HITS:1 COG:Cj0555 KEGG:ns NR:ns ## COG: Cj0555 COG0471 # Protein_GI_number: 15791916 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Campylobacter jejuni # 16 458 17 420 430 80 19.0 5e-15 MAEIFALLIFVALFAIGAVRGVHIGVLMIAGAAGTGIVLAGMEVKEIVEGFPLNIMILLV GVTYFFAIAQTNGTIDALIDRALTKVGNRAALLPLVFFLLTMGIASMGAPLAGLVMMPVA MQVARRYGIDFALMGLAVCFAIGAGGFAPTSLYGIVTYGTAHSAGISLHPFVLFGIAVAT YVIMLAVSYTMFGRSLMRTQTSAQRSIDVPDLATARAQGNHPSEQETALNRGKASIASGD FLSDDDEAMYSSADADNESVAVQKLTTVQILTVVMIVALIGAVIALAAFGKEPDIGILCF AFASVLTLIDPSTGKNSVSKIDWSTVLLVGGIITFVGVLEHMGAVDLLGEAAKSAGSPIV AAFVLCLVGGLVSAFASTTGILAALVPLALPLIADGSLPGWALIAALGICSAVVDVSPFS TLGATVVATAPEEDKPRLVRVLTRFGLSMVVIGPVALIGLLVVPTMLAS >gi|294970934|gb|ADNU01000049.1| GENE 55 57282 - 57848 388 188 aa, chain - ## HITS:1 COG:CC0871 KEGG:ns NR:ns ## COG: CC0871 COG0454 # Protein_GI_number: 16125124 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Caulobacter vibrioides # 13 184 36 194 194 119 43.0 3e-27 MRVTAQAIEPWVALVESAYRGEASRAGWTTEADLLAGQRLDATMAAEVLAQDDTVVFAVP AHVPGATETSTSSPEAVTTFAASVQLVRTSEREAYLGMFAVSPDQQGSGLGSRLMAWAEN WVRSQWGVRSIKMTVIRQRSELIEFYRRRGYEPTGETEPFPYGDERFGTPLRDDLEFVVL SKGLDIPN >gi|294970934|gb|ADNU01000049.1| GENE 56 57862 - 58827 669 321 aa, chain - ## HITS:1 COG:mlr3204 KEGG:ns NR:ns ## COG: mlr3204 COG2423 # Protein_GI_number: 13472795 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Mesorhizobium loti # 6 317 1 320 321 104 30.0 2e-22 MASQEVLHIDSHEVDAALDFAGAVEVLRGTLANGFDPETDGVRTRSELRGGEFLFMPSQV GAYAGVKVLTATPNNPERGEPLIQGTCLLLDGTTHRTLATIDGVALTNLRTPAVSLAGVL PFARARNPEGLSMVVFGNGVQAVPHIRAAHQNLPITRTSVIVRTPGRGDQVVKDAHAHGI EVDQIVAESSQATGALQEAGLVVTATSASEPLFDASLINDSACVVAMGSHTPDARELPGE LLGRATVLVESMATAKAECGDVIQAVNEGHLTWGDVRTWAHSLDAGAVASGAPVVFKSAG MSWEDIAVAAAIYEAVKGERG >gi|294970934|gb|ADNU01000049.1| GENE 57 58862 - 59161 360 99 aa, chain + ## HITS:1 COG:Cgl2510 KEGG:ns NR:ns ## COG: Cgl2510 COG2388 # Protein_GI_number: 19553760 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Corynebacterium glutamicum # 7 96 6 93 96 80 43.0 1e-15 MEFNADDIAIVHNEKDRLYSVEYQGASIAFCSYTEDAEARIRDFNHTVTQPEYGGLGLAG KVVRHALDDSISDGFSIQAGCSYVEHFIEKNPEYKEHLA >gi|294970934|gb|ADNU01000049.1| GENE 58 59230 - 60687 1522 485 aa, chain + ## HITS:1 COG:Cgl0050 KEGG:ns NR:ns ## COG: Cgl0050 COG1012 # Protein_GI_number: 19551300 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 1 481 3 483 490 534 59.0 1e-151 MDVQSIIDKVPTGLYINGQWRDAEGGNTFEVENPATGDVIARVADGTQEDALEAIRVAGD TQKEWAATAPRERSEVLRRAFEILMERQDDIAAVMCSEMGKSLTESKGEVAYGAEFFRWF AEEAVRVGGDFTMSTDGKTRLMVSREPVGPCVLVTPWNFPLAMGTRKIGPAIAAGCTMVF KPAKLTPLTSLMLVQALEDAGLPAGVLNVVTSKSASRVVTPWMESGIARKVSFTGSTGVG IGLLEQAAQNVMKSSMELGGNAPFVVCEDADLDAAVEGAMLAKMRNIGEACTAANRFYVH ESLAQDFAAKMVERMEALKVGNGIEEGVDIGPLVEESARDKVDSLVSDAVAKGAKVATGG KKIDGPGYFYQPTVLTDVPRDADIAVEEIFGPVAPIFTFTSDDEAIEQANSTDFGLAGYI FTQSLDRGLRLSEQLQVGMVGLNTGLVSNPAAPFGGVKQSGLGREGSNVGIDEYLEVKYV ATPRS >gi|294970934|gb|ADNU01000049.1| GENE 59 60768 - 62255 990 495 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396205|ref|ZP_06806387.1| ## NR: gi|295396205|ref|ZP_06806387.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 495 1 495 495 746 100.0 0 MDTSIVILIIIGVLVFALPSLVKGVAKAGDADTVPPSARDPRTGSRTHCDGQASQPHTLL TGELADIPEAGVPFATQPPSISLRRPEPELTVLAGGLDTEELAHEEAHDHVYLAPASGMD SVAVSHRPLDIRMTAHTPKPQTPQSHGSKPHTPQPHAAKLHSAKTTGKTAGGKTPVKGTP AKATKPTVIKAEAAPRQGGVSAPGQHETNKLKRLLALGFMGLFVVAVVTGAFSIFGPLSF AAPVLTLAASLACLTGVVALNSVNEPASVEASAEVSRGGGKVSAEKARGAQKVRAEKATP VARESAAKPRVAVAGAITSEIPVVKDQARDTAQSKATEPRPAEPKQDATRDSEQTEKHTV AQNSPSSTDQSLSVKEASEAPELHLGEKFEELSQGKGWFPKDMPAPTYVTKAHAEQATTS GKVEAAQTSYGVSPSDREELARAFAAEVGARPELEDAAKDSAALRHGKAAIRSDKKLAND NARAVVDDVLARRRA >gi|294970934|gb|ADNU01000049.1| GENE 60 62324 - 62935 526 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227427635|ref|ZP_03910696.1| acetyltransferase, ribosomal protein N-acetylase [Xylanimonas cellulosilytica DSM 15894] # 16 199 14 198 198 207 55 2e-52 MVDWWPSRLIDADLTLRPLLRTDKREYVEVRSVNAQWLEPWEATTPGWEGSIPTFSRLRK SLNSAGKRGELLPYALIVDGRFRGQLTVSGISWGSLRSASLGYWIDSRVAGRGYTPRAVA LATDFCFFELGLHRMEINIRPENAASLRVVEKLGFREEGVRREYMHINGEWADHRTFALL STEVPEGLMTRCRRNTEPRKSRE >gi|294970934|gb|ADNU01000049.1| GENE 61 62938 - 63513 302 191 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396207|ref|ZP_06806389.1| ## NR: gi|295396207|ref|ZP_06806389.1| hypothetical protein HMPREF0183_1887 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1887 [Brevibacterium mcbrellneri ATCC 49030] # 1 191 1 191 191 363 100.0 3e-99 MTAGQFEPPQFSAVIAYDPAVVSPQTLKHALYVCSVNEFNAIEHPVENAQDMSGLLTKAR GSLDLLIYLGDLPVRSIDPVCHTIELELDSRTPGVVNLARDVLMESGHTRALFEHMVAGW MGRTLVMTLPANSGALTETFIEILPAYAELMDPNPQPPKPQLTAAGSADGPVSENDTDTA TILRMPKRSRD >gi|294970934|gb|ADNU01000049.1| GENE 62 63510 - 64406 1008 298 aa, chain - ## HITS:1 COG:CAC2335 KEGG:ns NR:ns ## COG: CAC2335 COG1210 # Protein_GI_number: 15895602 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Clostridium acetobutylicum # 7 290 3 282 303 287 50.0 1e-77 MSNTKSVKKAVIPVAGLGTRFLPATKATPKEMLPVVDKPAIQYVVEEAVNAGIHDVLMVT GRNKRPLEDHFDKVDGLEAALKAKGDDKKLRSVQHASELADIHYVRQGDPLGLGHAVLKG EQHVGDEPFAVLLGDDLIDENNPILPTMMAVQEATGGSVVALMEVPADSINLYGCAAVED TGVENAVKITDLVEKPAVDEAPSNLAVIGRYVLAPEVFEVLHNTPPGRGNEIQLTDALKT LAEDPNSNGVYGVVFSGDRYDTGDKLSYLKAVVTLAGRRDDLGEELNAWLTEYVAGLK >gi|294970934|gb|ADNU01000049.1| GENE 63 64429 - 65058 421 209 aa, chain + ## HITS:1 COG:NMB2099 KEGG:ns NR:ns ## COG: NMB2099 COG0212 # Protein_GI_number: 15677919 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Neisseria meningitidis MC58 # 10 206 6 190 193 63 25.0 2e-10 MEGTVAHARKKELRQRIRSRRSTLSADHPARSELNAQVSALIESVMREGAHLNILAYASI AHEPSIDDALDQARTNGARVYLPVVTGAGEPLMFGEATVPMKELTPAGTWGIREPRPTVG AEQLVSDLGLALIPGLSFSAEGDRLGNGGGFYDRTFGPQGVAPLLREPGRHLPLSAGVCF EAEYGGKFPVAAWDLRVDAVVTEEGLRTV >gi|294970934|gb|ADNU01000049.1| GENE 64 65186 - 65533 136 115 aa, chain + ## HITS:1 COG:MT1020 KEGG:ns NR:ns ## COG: MT1020 COG2331 # Protein_GI_number: 15840416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 67 8 73 117 75 58.0 2e-14 MPTYSYACRECDHAFDIHQSFSDDSLTTCPACGKESLRKVFGSVGVTFKGSGFYRTDSRS GGSGSSSGSGGASGSASGSGSSSDSGASSGGGLSSSGSSSSSSSSGSSSSGSSVS >gi|294970934|gb|ADNU01000049.1| GENE 65 65660 - 66316 231 218 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0573_10484 NR:ns ## KEGG: HMPREF0573_10484 # Name: not_defined # Def: hypothetical protein # Organism: M.curtisii # Pathway: not_defined # 29 189 10 171 198 67 30.0 3e-10 MNTWLKRLTGSTEKKSPNAPPRRLTHTQRRLLAAVCAGLATVTLVMVLLPRSHGDRIVVA HTRIDPGTVITARLVTTRVFPPQLIPENAVTDPAQVVGTTSASSLDAGTPVTTTALLESA PANIPPGHVRVPISVSDPATTSVLRPGHRIQVYSSTSEEANSLVDDALVVSVTTANDQFT GQTSVVTIAVSQEDAPKLAGNAGLSFGLLGETETQNTS >gi|294970934|gb|ADNU01000049.1| GENE 66 66451 - 66927 528 158 aa, chain + ## HITS:1 COG:Cgl0854 KEGG:ns NR:ns ## COG: Cgl0854 COG1970 # Protein_GI_number: 19552104 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Corynebacterium glutamicum # 1 130 1 133 135 157 66.0 8e-39 MFKGFRDFILRGNVIELATAVIIGGAFTAIVTAVSDKIINPLIAAVGSPEVGGLGFRIRP ERAETFVDFGAVITAAINFLIVAAVVYFIIIMPMNRLNEWRNRNADEEEVPPTSEELLTE IRDLLVAQNQSAGIPGEAHANSVASEDADTNLGEAGKH >gi|294970934|gb|ADNU01000049.1| GENE 67 66991 - 67263 204 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396213|ref|ZP_06806395.1| ## NR: gi|295396213|ref|ZP_06806395.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 27 90 1 64 64 93 98.0 5e-18 MLAFAKMSAKARVKVRANVKASETTSVATRKGSSEEPSESQRRKRAQQAKEKYRRLLGNR SGETVTGDSGLSHEKPPHWGDQLFTPPKRG >gi|294970934|gb|ADNU01000049.1| GENE 68 67172 - 71629 3406 1485 aa, chain - ## HITS:1 COG:MA3490 KEGG:ns NR:ns ## COG: MA3490 COG1112 # Protein_GI_number: 20092301 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Methanosarcina acetivorans str.C2A # 337 1324 311 1383 1939 196 24.0 4e-49 MSMSNSSINSAVAEWNERATKIGGRDTMLKFRDSREGSLDLSGAHPSGVAQLLAGRATRL SSLIRNTEQLADARRRVKSIRHKADQLSYERGIHTAHLAIGFAQWSRDIDGTRTDYSAPI LLRHVELVPRGTNVEDFEITLANDTVVNPALVEYLHKHHNVHIDTDEWIASTQESHGFDP TGVYKRLRTATRSVPGLLVTQRLVVSTFANITTPFGRDDLPLDHPVVRALAGDADARRSL SRGGSSDPAPAPTAGGGKGSAEVATTSAKKPGLSAGVSDANTKNLPTLGANADSAKSEDA GSTLKTSGEKKQKRLRKRREFRSSLDVQTTPRLPDRSPSSEFLALDVDGDQQAVVDAALA GESFVVDTPPGTGATQVATALATSLAHAGKSVLYVAQSSDALDDYAKRLDDAGVRNFVVD GRERMSDLKKQLVSLIISAERSSKPDLNQLLQKLTYTRERLNAHTASLHQKREPWGTSVF ATLEHLAALTASDPGPLTDVRFDDRVMKLDSAGRDTLRGDLLKLSDLGAFTMDVEDTVWF GARFANDEDAETARATAERAARLVTELTKQAEPVLRAAGMNPARNVDAWGKCLETIVDVS RMLKRFTEQVFDANLEELIAATGTGKYRRQHNIDQGMFERARLKKEAAALARGPIVDLHE ELQGVRKLRDQWYRLTRDTSKAPHAVDGADEAFDVHQELDIKLRQLDPIMDDTPDGGNLG RMLVEELQARLSAMGEDRAALADLPARTSADDKLREAGLGDLLDDLRARKVRHAGVGAEF DLAYWATVLQQMAAADALISGHDTRELDHLVREFRDADREFVKAGGQRLMYAHAAGWRRA IASFKAEAEIVRIALRAPHLHLQQLALEAPRVLSALAPVWMMSPFEVPNVFATQEFFDVV IVADAARLSVPEALPAIARARQVVALGDSRLPGPKPFSVSVNRHAAPTQPSSTSVFTELA EFLPLKGLRTYHRAAPQGLLDLVNGHFYDSAISSLPTARTSEGTGLEFAYVPDATGVPDS VTGQVESPDQEVSRVVDLVLRHARTKPRQSLAVITLTPWHAQRVASAVQSAIRQYPYVAS FFTDTTKEPFVVTDVERVQGFARDAVIFSVGYGRTLQGRVLYNFGSLEEPDSEKLLAAIV TRARRKLTLVSSYGPTDLERSRLKHGSRYLLELITAVVAASRSEAARGGEQGSDAASSRG TGAGTGTGAGSSTDAPSPLVVDIAERMRKLGAHPIVNYNGIDIAVPVGKTVEQGMALAIE TDGPAYASTPSVRERERLRRDSLERRGWTCARMWSMDAFVNPQAVAQRMFDLWRVSVEAH SPQSVLDAARAASVVTGRRGSRPQVTPGLPLHAYSESDLHQMLEWIQSDNQFRDDTELEH QLKNALAYRGHTDLNDTIAKAVRRYREAQARAKAVFEEQSHEGSENGRGGEEHELDQDAI MPTYDTGVLRDEDLIDAGLREDEREGTGESASEREGERDDKRGDA >gi|294970934|gb|ADNU01000049.1| GENE 69 71775 - 72917 1321 380 aa, chain + ## HITS:1 COG:CC0779 KEGG:ns NR:ns ## COG: CC0779 COG0183 # Protein_GI_number: 16125032 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Caulobacter vibrioides # 1 380 1 390 390 363 51.0 1e-100 MNDAVIVAARRTPTGKREGMLSGIHPADLSALVIEDIVSTTGIDPNLIDDVVWGCVTQAG EQTGDIARTAALSAGLPESVTGVTVDRQCGSSQQALHFVAAGVASGQYDIAIAGGVESMS RNPMFSSSMGKSLYGTKFKDRYPGDDPNQGIGAEMIAEKWGFSRTELDEFAVRSHELAAA ATDAGAFESQIIPVETENGTVSTDEGIRRGGSVEKLAKLQTVFKEDGVIHAGNASQISDG SAAMLVMTSQRAKELGLTPLVRVHTAVLAGDDPVMMLTAPIPATAKALKKSGLSIDDIGT FEINEAFAPVPLAWLKETGANPERLNPHGGAIALGHPLGGSGARLMTTMIHNMVNNNIKY GLQSMCEGGGQANATILELL Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:58:09 2011 Seq name: gi|294970923|gb|ADNU01000050.1| Brevibacterium mcbrellneri ATCC 49030 contig00055, whole genome shotgun sequence Length of sequence - 13911 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 6, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 628 683 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 769 - 828 6.5 + Prom 752 - 811 2.9 2 2 Op 1 . + CDS 895 - 2805 1692 ## COG1217 Predicted membrane GTPase involved in stress response 3 2 Op 2 . + CDS 2802 - 4220 887 ## COG2120 Uncharacterized proteins, LmbE homologs 4 2 Op 3 . + CDS 4204 - 5865 1361 ## COG2720 Uncharacterized vancomycin resistance protein 5 3 Tu 1 . + CDS 5990 - 7729 817 ## COG2720 Uncharacterized vancomycin resistance protein - Term 7476 - 7515 -0.7 6 4 Tu 1 . - CDS 7760 - 8809 665 ## Intca_2609 GCN5-related N-acetyltransferase - Prom 8860 - 8919 2.1 7 5 Op 1 4/0.000 + CDS 8772 - 9203 347 ## COG1146 Ferredoxin 8 5 Op 2 1/0.000 + CDS 9205 - 10311 1077 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Prom 10352 - 10411 2.6 9 5 Op 3 . + CDS 10437 - 11726 1331 ## COG0372 Citrate synthase + Term 11822 - 11893 15.0 10 6 Tu 1 . - CDS 11940 - 13901 827 ## ROP_10770 hypothetical protein Predicted protein(s) >gi|294970923|gb|ADNU01000050.1| GENE 1 1 - 628 683 209 aa, chain - ## HITS:1 COG:MT3767 KEGG:ns NR:ns ## COG: MT3767 COG4166 # Protein_GI_number: 15843280 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Mycobacterium tuberculosis CDC1551 # 62 197 35 167 541 102 47.0 4e-22 MKKRLTTLGAALGVSALLLSACGGSGGDGGNGAGGKDGGGSPVEVSGTKASDTYEGQEGG EVTFAGCNPQDLLIPGFTQETCGGDVLDSILVGLTEVDPSTGKPRLANAESIEANDDNTM FTVKLKDWKFDDGSPVTAKSYVDAWNWGANGANGAKQQAFFGPGFLDVKGYDKVAESKDK GATMEGLKVVDDKTFTVETTNANSLFETM >gi|294970923|gb|ADNU01000050.1| GENE 2 895 - 2805 1692 636 aa, chain + ## HITS:1 COG:Cgl1074 KEGG:ns NR:ns ## COG: Cgl1074 COG1217 # Protein_GI_number: 19552324 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Corynebacterium glutamicum # 1 635 1 636 637 793 65.0 0 MTHTSRREDRRNVAIVAHVDHGKTTLVNQMLAQTGVFGDHGDYSDRVMDSGDLEKEKGIT ILAKNTSVLYNGPSAQGQPIIINVVDTPGHADFGGEVERGLSMVDGVVLLVDASEGPLPQ TRFVLRKALAAKLPVIVVVNKTDRPDARIDEVIEETQDLLLGLASDLSDEVPDLDVDAVL DFPTIFASGKAGRASTEQPANGDLPDSENLEPLFKTILEHIPAPAYNDDGVLQAHVTNLD ASPFLGRLALLRIYGGTLKKGAQVGWVQNDGTVKTAKVSELLETQGLERFPATEASAGDI IAIAGIPDIMIGDTITDLEDPRPMPPITVDEPAISMTIGINTSPLAGREKNTKVTARQVK DRLDQELVGNVSLRVLPTDRPDAWEVQGRGELALAILVEQMRREGFELTVGKPQVVTREI DGVLSEPMERMTIDVPEEHLGAVTQLMAARKGVMETMTNQGTGWVRMEFRVPARGLIGFR TRFLTETRGTGIANSISDGYAPWAGAIEFRTSGSLVADRAGAVTPYAMINLQERGTFFVE PTSEVYEGQIVGENSRADDMDVNITKEKKLTNMRSATADSFENLVPPRKLTLEESLEFAN DDECVEVTPSIVRIRKVILDQKERHKVANQKRRQNS >gi|294970923|gb|ADNU01000050.1| GENE 3 2802 - 4220 887 472 aa, chain + ## HITS:1 COG:ML1495 KEGG:ns NR:ns ## COG: ML1495 COG2120 # Protein_GI_number: 15827787 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Mycobacterium leprae # 4 277 7 285 308 108 36.0 2e-23 MTTVLFIHAHPDDESIMTGGTMAALAARGASVVLVTATRGEGGEVIGETHAHLFGNRPGL AEHRERELAEATSALGVTESYFLGEERTVAGTQLPPRRFEDSGMEWGADGHAVAPAHMPP EALCSATVAEVADYVGAAIRTVRPDLVVTYGPGGGYGHPDHVRCFEATQEALARLGAGAP PVVFAEVPPEVAVDAFDPEAPGFDLTGFGAATSVPSVPAEYPVAVAQDLSEFVGAKAMAM AAHATQITVAGEFFALSNDVGQKILDTEYFTAPGYSGPVLGDLLEYAQEHRRQVPAESGA NEVAGTHGGISGAHEGASAGASQEAPEDSGKKSAGRWVADTLHTVLVAVLVCLLGTLQHL NASAVNVSGQTIIVPWGLVLAVAMLIASTWHIAVSHRSTLLVVIHGVVISVGSFILGQRG FLPGQDLLITNFYRSVVWLFAPMVIAGIMAFTLPSLKPQPPVVRKEKDETGS >gi|294970923|gb|ADNU01000050.1| GENE 4 4204 - 5865 1361 553 aa, chain + ## HITS:1 COG:Cgl2791 KEGG:ns NR:ns ## COG: Cgl2791 COG2720 # Protein_GI_number: 19554041 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Corynebacterium glutamicum # 15 553 28 563 563 214 29.0 4e-55 MKRVAKFVGIGVCGLALIYLVVAFLTSRAALAGTSVAGVDVANKTVDEIPGVLEEALKDK ADQDITVKVESGNGDAKVSPKDAGVEVDYEASAQKIAGFTLNPVTLYERFNNRTNQSPEL KVDDSRLTTSAAAVAKNLEKSPESAKLAFEKNSVKLSPSKDGTQVDPELVGQGIRDQWLM EDTVTVKDEVKQPDFTTEDAEKVKREVAEPALKDDVTLKVEGDVEAGKELTVTPEAIVKH GSFDESGQLVFDERFRTTVMNDNPDVGEAGRDASFEFVDGKPKVVPSRDGVSVNKDELAK AVRDAIGADDRSAAITLGAEPADFSTEDAEKLDLSDTVSDFATPYASSPARDTNLKVSTR AVSGTVLQPGEQFSLNKTLGPRTASAGYKPAGVISGGQMKQDYGGGVSQVSTTLFNAAFF AGFDLDEHKAHSRYISRYPEGRETTLDYKSIDLKFTNNTDKPVVLDMYLEGGKVHARILG VKTVDVEADASSRFAYTSPSTIKGSGSTCKPQSPRPGWSIKIFRTIKEHGSGKVIKKDDF VTVYNPVHRVTCS >gi|294970923|gb|ADNU01000050.1| GENE 5 5990 - 7729 817 579 aa, chain + ## HITS:1 COG:Cgl2791 KEGG:ns NR:ns ## COG: Cgl2791 COG2720 # Protein_GI_number: 19554041 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Corynebacterium glutamicum # 41 576 32 563 563 118 26.0 3e-26 MGQTRPGTGPGTHQGQGGGALMDKKHVHRIGIVCCVLVVAYVVIAFFLTRHALDGTRVSC RNVGGMSYEEVVQSIEENSSGTTFIVSPEAGGGHTTVSAEDMGITVDAHATARQVAGFTL NPVTIVKRIKATYDDGSVALIKRIDDEKLGRMSDRIAHELSHEKKNATVYFTSAGAFSSD DSEDGLEVESAEVQKAVLKAPNDRSSILKVPTKMINADVSDAQASARAYEIDQGLGDKDV VLKAGGGASLRIPVELIRQYGYFNDKLELCFRGEEFRNAVMDENPGVGDHIVNARFEFPD GKPTVKPAHNGVSVDSDELTRAVREAIASPDSTASVGVGDQKAQFSTKDAEAMKFPDVIS QFATDNPQNDERNARLEHVAKKISGTVVKPGETFDFNVVVGPDWAEPGYKPFPQPTVLGG VKDDSLGGPHSQLATTLFNAALKAGLEIREQHGGRQRPSVYPDGRDVIVNTRTNFVFVNT TDKPIVIESFADDNKTHVKIHGTKQFDVELLTTDRWNVTAGLPPTKESGRRCVSYPSLDG GSVLTYRVIKDRNKDQPAMRDTFYREYSDQQGQICSGKS >gi|294970923|gb|ADNU01000050.1| GENE 6 7760 - 8809 665 349 aa, chain - ## HITS:1 COG:no KEGG:Intca_2609 NR:ns ## KEGG: Intca_2609 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: I.calvum # Pathway: not_defined # 2 346 35 360 362 67 24.0 8e-10 MFSPGTRVVVRYTDNGSLTDALGEVLETTPTHLRIATKRGPVDVPIDAIETGHEIPPAPT RPGKLHEIVSAEDLRKVAAATWSPHEIAWLHADNLASELRGEDPKVLSGWLLRSAPATSA VNISALNTSAAANSALPISDPGMPAQEALSLSIDWLKERGSTPYILIHTQAHSSELSPAS QQVAPLLRGEGFVPSDPITTFTAPTAELAQLREPDGEIVESDTPAPLHYAVWGIEESARE EYSHLISSAPQYRVLSAIATGSDGTRTMVGAARIAFAMKWAVLSHLVVHPDSRRTGVGSA LVTAAARLAQTRGVRSLMYEAPDRERSDFAHACGMSEHHRVWMAQPASE >gi|294970923|gb|ADNU01000050.1| GENE 7 8772 - 9203 347 143 aa, chain + ## HITS:1 COG:ML1489 KEGG:ns NR:ns ## COG: ML1489 COG1146 # Protein_GI_number: 15827784 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Mycobacterium leprae # 39 142 1 104 108 158 75.0 3e-39 MYLTTTRVPGENMEALSSVEKYVRRSNLIKYPYNQEVSVTYIIAQPCVDLKDKACVDECP VDCIYEGARSLYIHPDECVDCGACEPVCPVEAIYYEDDVPEQWAEYYKANVEFFDEIGSP GGAAGVGNTGTDHPIIEALPPQQ >gi|294970923|gb|ADNU01000050.1| GENE 8 9205 - 10311 1077 368 aa, chain + ## HITS:1 COG:ML1488 KEGG:ns NR:ns ## COG: ML1488 COG0436 # Protein_GI_number: 15827783 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium leprae # 3 366 4 366 367 330 52.0 2e-90 MNFAQYGRHLEAYPWDKLAPLKARAEERGLCDLSIGTPVDPTPQVVQDALSAGADAHGYP TTAGTPQLREAIAGWYSRSRGVSVAPDAILPTVGSKELVAWLPTLLGLKELGLAVAGPSL AYPTYRMGATIAGVEFRQLDAHEIAEGASLEGIGLVWLNSPANPTGRVLDAQTLRKVVEA TRKAGVVVASDECYALLNWEAQAPSLLDPAVAGDDHSGLLSVYSLSKQSNLAGYRAAFVA GDQSLIADLINTRKHAGMIVPGPVQTAMIAALQDSEHVVAQKETYRARRDLLKPALEAWG MTIDHSEAGLYLWCTRGDDCWDTLSDLADLGILAGPGIIYGEDGAQYVRVALTGSDDTIR AAAERLRR >gi|294970923|gb|ADNU01000050.1| GENE 9 10437 - 11726 1331 429 aa, chain + ## HITS:1 COG:MT0920 KEGG:ns NR:ns ## COG: MT0920 COG0372 # Protein_GI_number: 15840315 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 13 429 16 431 431 526 59.0 1e-149 MVADGKILVGEKELELDRVRATEGTEGLRIGSLLKETGTVTYDPGFTSTAASSSKITFID GDEGILRYRGYPIEELAEKSSFIEVSYLLIYGELPTAQQLEEFTAKYSSHMIVNDNMREF FRAFPYDAHPMSMVSGAISAMSTFYQGSLDVFDEEQVELSMLRLMAKMPTITALASRRRS GVPVVHPSDNLSPMENFARVHFALPTQGDFEPDPLLVKALDILFILHADHEQNCSTSTVR LVGSSQANIYQSVSAGVSALSGPLHGGANSAVLEMLQEIAESDDGAEKYMERVKNKEQGV RLMGFGHRVYKNYDPRAAIIKSVAHDILEKLGGNDELLDLAMKLEEIALKDDYFVSRSLY PNVDFYTGLIYKAMGFRTDMFTVLFAAGRLPGWIAQWHEMIQDPETKIGRPRQVYTGSPQ RSYVPVEER >gi|294970923|gb|ADNU01000050.1| GENE 10 11940 - 13901 827 653 aa, chain - ## HITS:1 COG:no KEGG:ROP_10770 NR:ns ## KEGG: ROP_10770 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 445 547 292 394 421 88 45.0 1e-15 MFDEMLTSKRVDVSWKTFKRHVTEVLAMLTTPESRSETARRNRSVSYWVNDDGTATLSLT GPVLEMEAFYQRVRGTARAIMANHIEPFTATLTDEQQALFITENNGETTEVRVGDLGRVE VDDDRLMDQLTLDLITGAKPSTTLRVRVTRTGKQAPIKVTTIPVDAEHAGEGSGAASGVE IVREDGTQAQIRNAAGAQTQGGNAIGAQTQGGNAAGADANGADVDGGSATDGFGAAASGP GDADGSVWAEKCEARQAEDVYELELCVSMPEKEEWLRAQAGITVTVPVLHFLMDNPPSGT ESIPEEQRSERQRSGKAPGVDKHRPENHDLGRHETEEQAFENQGRSAPSGTDSPPGSEET LNPEEFLNTEERMSASEPVGAGSELDYGLPVEVDPGARVPVMMNNRVPLDTKTADEVIAQ AKWVYRMFTDPQTGVVLESTPTKYYIPAALKRMVEARHPDCSAPWCAVPARVCEKDHIEP FNHQDPENGGLTVMENLHPLCKRHHQEKTQKRLRVDKMDDGSLAWVFPRIGAMLVYPPES RINQLQYERLLEYFDTGVQDISDTVNECLATEHQTAHGAERTATNCPEPGVDYGSEPTTV NRTEPRTAPSSGQVNGDLSAAYPREVADEYALAGEVFNGDTRLWESNEEPPPF Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:58:26 2011 Seq name: gi|294970920|gb|ADNU01000051.1| Brevibacterium mcbrellneri ATCC 49030 contig00056, whole genome shotgun sequence Length of sequence - 850 bp Number of predicted genes - 3, with homology - 1 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 179 - 454 244 ## - Prom 477 - 536 1.7 2 1 Op 2 . - CDS 539 - 778 90 ## gi|295396229|ref|ZP_06806409.1| conserved hypothetical protein + Prom 436 - 495 2.2 3 2 Tu 1 . + CDS 653 - 848 152 ## Predicted protein(s) >gi|294970920|gb|ADNU01000051.1| GENE 1 179 - 454 244 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIVVSACDIRGVMHSTPVILAPPFIVAIQGPDLPIPDQILDAQGLGIVFGPIRDIPTQFS LFGGRALPDGIAESAITCSAEGVLGFRAGAG >gi|294970920|gb|ADNU01000051.1| GENE 2 539 - 778 90 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396229|ref|ZP_06806409.1| ## NR: gi|295396229|ref|ZP_06806409.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 79 9 87 87 147 98.0 2e-34 MRAPLSDQVAFEPRVALLILAEIGAQQSPIPPFVLFGVDRLHLGLGLQHIGQTCPLPGFG FLTCHDNQVHDAATLSPIR >gi|294970920|gb|ADNU01000051.1| GENE 3 653 - 848 152 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METVNPEEYERWDRALLGADLGEDEESYTRLERDLVAQWRTHRDDPLPEHLRQAAKLAQS LAWLG Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:58:45 2011 Seq name: gi|294970916|gb|ADNU01000052.1| Brevibacterium mcbrellneri ATCC 49030 contig00058, whole genome shotgun sequence Length of sequence - 1951 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 354 - 1100 679 ## Ksed_23700 hypothetical protein 2 1 Op 2 . - CDS 1105 - 1824 665 ## Ksed_23690 hypothetical protein Predicted protein(s) >gi|294970916|gb|ADNU01000052.1| GENE 1 354 - 1100 679 248 aa, chain - ## HITS:1 COG:no KEGG:Ksed_23700 NR:ns ## KEGG: Ksed_23700 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 248 1 248 248 347 94.0 2e-94 MLRAEILKLKRSATWIITLILPLLAVTTGTINLANNPDTLDAGWASFTSQVTLFYGLLFF SIGIGLIASTAWRVEHRGTNWNLLLTTTRKPGKLVVAKVLVIMIPVAFMQLVLVAGTLIS GTLVLGLEGAIPWQFALIGAISVLAALPLIAIQSLLSMLLKSFAAPVAICLLGCAVGVAT VTSEALRPLSFIWPQAINTRALNLGSTALAGSGGLTAQDALPLIGTALGVALIIVALTGT TIRTVKLR >gi|294970916|gb|ADNU01000052.1| GENE 2 1105 - 1824 665 239 aa, chain - ## HITS:1 COG:no KEGG:Ksed_23690 NR:ns ## KEGG: Ksed_23690 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 239 12 250 250 378 92.0 1e-104 MRRLRTFLITAILVLAVAGLSSFSLFAGSTQESFNDPDALPWEGLMVTYTLMAAMTSPNL AAVLASRQTDIEHSGIGWTLASTAGYSPGVLCRAKLVALSAVLLPAVIVQTLLVIGIGMF AGIRVPLEAGPWVLYTGLLFLIDVAFLALHIWLAAIVENQLVSVGVGMLGAFLGVFTLLT STAIARLIPWGYYAIISPIGQQGDRLVYLTLPFGWIVGFLILVGIVFAVATRRLDRIER Prediction of potential genes in microbial genomes Time: Wed Jun 29 02:59:04 2011 Seq name: gi|294970888|gb|ADNU01000053.1| Brevibacterium mcbrellneri ATCC 49030 contig00059, whole genome shotgun sequence Length of sequence - 29711 bp Number of predicted genes - 27, with homology - 26 Number of transcription units - 14, operones - 7 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 994 580 ## gi|295396237|ref|ZP_06806415.1| conserved hypothetical protein - Prom 1043 - 1102 3.4 2 2 Tu 1 . - CDS 1113 - 2015 568 ## COG3823 Glutamine cyclotransferase - Prom 2101 - 2160 4.6 + Prom 1918 - 1977 2.1 3 3 Tu 1 . + CDS 2076 - 2234 78 ## 4 4 Tu 1 . - CDS 2200 - 3387 536 ## gi|295396237|ref|ZP_06806415.1| conserved hypothetical protein - Prom 3418 - 3477 3.5 5 5 Op 1 . - CDS 3504 - 5717 1367 ## COG1331 Highly conserved protein containing a thioredoxin domain 6 5 Op 2 . - CDS 5765 - 7117 1393 ## COG0477 Permeases of the major facilitator superfamily + Prom 7102 - 7161 2.4 7 6 Tu 1 . + CDS 7193 - 7777 627 ## COG0412 Dienelactone hydrolase and related enzymes 8 7 Op 1 1/0.000 + CDS 7888 - 9003 1121 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 9 7 Op 2 . + CDS 9041 - 11824 2318 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 10 8 Op 1 . - CDS 11847 - 12650 218 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 11 8 Op 2 . - CDS 12681 - 13256 292 ## gi|295396244|ref|ZP_06806422.1| conserved hypothetical protein 12 8 Op 3 . - CDS 13253 - 14104 578 ## COG3220 Uncharacterized protein conserved in bacteria 13 8 Op 4 . - CDS 14101 - 14766 808 ## gi|295396246|ref|ZP_06806424.1| hypothetical protein HMPREF0183_1922 14 8 Op 5 . - CDS 14820 - 15302 161 ## gi|295396247|ref|ZP_06806425.1| conserved hypothetical protein 15 8 Op 6 . - CDS 15200 - 15691 289 ## gi|295396248|ref|ZP_06806426.1| conserved hypothetical protein - Prom 15725 - 15784 2.2 16 9 Tu 1 . + CDS 15838 - 16806 814 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Prom 16819 - 16878 4.0 17 10 Op 1 . + CDS 17034 - 17738 559 ## MTES_0115 LysM repeat + Term 17762 - 17819 8.2 18 10 Op 2 . + CDS 17849 - 18217 383 ## COG0640 Predicted transcriptional regulators + Term 18244 - 18310 29.7 - Term 18232 - 18297 29.5 19 11 Op 1 . - CDS 18299 - 19519 1200 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 20 11 Op 2 7/0.000 - CDS 19545 - 21200 1005 ## COG2225 Malate synthase 21 11 Op 3 . - CDS 21313 - 22590 1331 ## COG2224 Isocitrate lyase - Prom 22651 - 22710 2.0 22 12 Tu 1 . + CDS 22772 - 24280 676 ## Celf_2829 XRE family transcriptional regulator + Prom 24290 - 24349 3.1 23 13 Op 1 . + CDS 24441 - 25247 543 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 24 13 Op 2 . + CDS 25279 - 26094 668 ## Mflv_4597 wyosine base formation + Term 26335 - 26377 1.2 25 14 Op 1 11/0.000 + CDS 26504 - 27010 435 ## COG1960 Acyl-CoA dehydrogenases 26 14 Op 2 . + CDS 27060 - 28604 1111 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 27 14 Op 3 . + CDS 28744 - 29409 541 ## gi|295396261|ref|ZP_06806439.1| conserved hypothetical protein + Term 29424 - 29473 17.0 + 5S_RRNA 29478 - 29591 91.0 # Z50061 [R:1..120] # 5S ribosomal RNA # Amycolatopsis orientalis # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Pseudonocardineae; Pseudonocardiaceae; Amycolatopsis. Predicted protein(s) >gi|294970888|gb|ADNU01000053.1| GENE 1 1 - 994 580 331 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396237|ref|ZP_06806415.1| ## NR: gi|295396237|ref|ZP_06806415.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 253 7 299 395 92 32.0 4e-17 MVAVVCLGLFVSVISTATPVHAQAQSSGCVKAPNLIDVSPASITESHLKEHGATFTVKGL PPDAVVYVALFPGDLVDIRDAWDYWDVDPNSPVAVPATNRYVKIGYVDADSSGVATFTLG GKTNSDKDIEVPPEYEGYQWTSTLPASDSGSYIGSYALRVGAINSSEGYLYRFIHDGAEI SVMSEQDFRESQRVRAEELLEQGVPEDEIEAQIWAHERYFTGSSLCTSFAVGEDPSSTPE PEPSPEPEPSETPEPTPEPEPSESVTPTPEPEPTPEPSETPEPSPEPSPSESVTPTPDPE PSPEPEPSETPEPEPSESPDPEPSPSPSETP >gi|294970888|gb|ADNU01000053.1| GENE 2 1113 - 2015 568 300 aa, chain - ## HITS:1 COG:Cgl0799 KEGG:ns NR:ns ## COG: Cgl0799 COG3823 # Protein_GI_number: 19552049 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutamine cyclotransferase # Organism: Corynebacterium glutamicum # 24 299 4 258 258 220 46.0 2e-57 MRYADSTIDSKFIRAIKTYRGLLLSVSSVLTALVVSACSRGTDAGPSPAITENADSSPQR LNVEIVDEHPWDSSSFTQGLEVADKGRLLVGTGKTGKSRIYHASLDGEQFNSQPLPPEFF GEGVTQHVGGNTSHVWQLTWQQNVALLRDSETLEVISTKTYDGEGWGLCSDGQRLVMSDG SGTLTFRDPESFDPVGTVSVTVAGTPAQRLNELDCDPSGGPNGSPVVWANVWESDEIYRI DPQSGEVTGIVDTLGVFKASRKPGADVLNGIAGIPGTNRYYLTGKYWDTLYEVRFNPEER >gi|294970888|gb|ADNU01000053.1| GENE 3 2076 - 2234 78 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEHLSESTRKFYISHSPGEVFLRLLPGSFPIYVYARILVTVNVSDDAIGQL >gi|294970888|gb|ADNU01000053.1| GENE 4 2200 - 3387 536 395 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396237|ref|ZP_06806415.1| ## NR: gi|295396237|ref|ZP_06806415.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 395 1 395 395 585 100.0 1e-165 MKKFFALAAVICLGLVGSVISTVTPVHADSRRVGFCLNDSRLFDISPSPVTEGQLKQSGA EITVNAKGLPPNTLGVVLVVKDKLLTPEDLMRTRFDGDIPEHAQGELKALQALNLDYSEP ALYLFNESDRDPNLVARKGYVVTDGNGDAAFTFGGTKDSKEEPPLTREQKELVTELDVKP WSSSLPKIDNGDYRGDYTVLVAFYNADISEPYGVVFDENNTLIPAEGMELDDQKHEAVIK QRENRLREAGVPEDQIDYLARLIMPSACTGFNVTDTPTETPEPTPSESATPTPEPSATPS ESPSVDPEPSPSPSETSPVEPEPTPEPSETPEPKPSESPDPEPSPSPSETSPVEPSPGPK SLPRTGAQTLGALVAGGVLLTVGTVTTVLSRRRSR >gi|294970888|gb|ADNU01000053.1| GENE 5 3504 - 5717 1367 737 aa, chain - ## HITS:1 COG:BS_yyaL KEGG:ns NR:ns ## COG: BS_yyaL COG1331 # Protein_GI_number: 16081134 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Highly conserved protein containing a thioredoxin domain # Organism: Bacillus subtilis # 4 667 8 603 689 276 31.0 1e-73 MDANALHTSTSPYLQSHAHQPVNWHMWGPEAFELARTRNVPVLVSIGYSTCHWCHVMARE SFSDPAVAKVLNDNFVAIKIDREELPHVDEFYMNALQALRGQGGWPLNAFTDHQGVPFFA GTYFPSHTGRGLPTFMQVLQAVTNTWRDQQEQISAITHRLRTQLEAVAESTTASVPEGEL ANLTADLTSNLTADQPAASATPPVPAEELTAWSEQLADRFDPVYGGFGGAPKFPPSMVLQ ALMQRADFDDNALTMVRTTLHNIAAGGMRDQLRGGIARYSTDAQWHVPHFEKMLNDNAAY LSAAAAWWTWEHARDPHSAHAHVARAEVVATARFLLTDMRLPGGGLATALDADSPLGSVS VEGAYYTFTNSEVEQALAESGVVSDYFALVEFPDSGFEGGEPRCALIAPGRGVSDVGADE DGAGDAAGSGSVDEAEAGPGTGSEMVADRDVQPVIEHLRALQETRTPPKRDTKLITEDAC RAAVALVRAGLVLGEGELVDAGAATVQSVLDNNRAGEQLLRSTTDGKPGPSTAGLADYAA LIRALLELHQVVGVGTHALTRTNVMPLIEELFDTARGLFVRDGHVHDHAPDPLVPASGAN PADSVVPCGRTAFAEVALLMSVLSPETGGGAAQLARELLTVGRPFMQSTPTAAGWQAYVA MRMSVPRVSTRGPELARIAYAHPSQPVVDTSDGAGADAAVVCVDTRCLQPATDARTLREQ LDALSVPVAISSAHEGN >gi|294970888|gb|ADNU01000053.1| GENE 6 5765 - 7117 1393 450 aa, chain - ## HITS:1 COG:Cj0339 KEGG:ns NR:ns ## COG: Cj0339 COG0477 # Protein_GI_number: 15791707 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 23 430 25 433 453 230 35.0 5e-60 MNQPAAPAEVADRKGGMSPGAVKALVASIVGTLIEWYDYALYGAAAGVVIAPLFFPGHLS AAAGLSTFATFAVGFLARPLGGIVIGHIGDRYGRKPAMLLTIILMAVATVGMGLLPTAHA IGVFAPILLVLFRFIQGFGAGAELTGAITVVAEYTSPKRRGWFTGFILSMPPLGIVLATG AFLWASHLPEEAFLSWGWRLPFLASALLFFVALYIRTQLEETPEYVASQENAAKQQAESK VPIKELLRSDFKGVLLGFFGMFGHSALVYLIASFSVFYLTSPYVGMSRSDALVAVTVGTL VAVVTTPFAGWASDRFGAGTVLATASALGIIYAYPFLKLLQMGTVASATLAVGVGFGVII AGTSGSQGAFMANLFPPEHRFSGMALAREANGAIVAGFSPMIVLALVNALDGDVWAAALF LAACSSVAVIAIVLSRGAGNNDNARVTNWA >gi|294970888|gb|ADNU01000053.1| GENE 7 7193 - 7777 627 194 aa, chain + ## HITS:1 COG:SMb20022 KEGG:ns NR:ns ## COG: SMb20022 COG0412 # Protein_GI_number: 16263773 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Sinorhizobium meliloti # 1 187 1 181 188 103 37.0 2e-22 MATIILFHSALGLDQGMHRMADVLKNAGHTVHLPDFYDGNVFTETADGLAYRDDVTFPEL AKRASAAVDEIVAGSSAERFIFGGFSLGAAMAQSFGKRHPQAAGALLFHAGGTPKPTSWQ ASATLQIHHTVGDPFYDEGQPELLARCAAEAGAQASHFMYPGKAHLFADPTKDDYDEELA TLMWERVLAFVNRA >gi|294970888|gb|ADNU01000053.1| GENE 8 7888 - 9003 1121 371 aa, chain + ## HITS:1 COG:XF1970 KEGG:ns NR:ns ## COG: XF1970 COG0332 # Protein_GI_number: 15838564 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Xylella fastidiosa 9a5c # 40 371 4 338 338 241 38.0 1e-63 MLRCAHWHAPALLTANLLDARIERTLLNGRTPGNTTFRHNNAALLGIAETTAPNPVSSGS FDEKLASTLKRLHLPQGLIRRVAGVDYRRNWDNPHDFIAGAVNAGKQALERAQVDADQIG VMINTSVTRETLEPSVAVSIHHGIGLPTSAMNFDIANACLGFVNGMTVVSTMIDSGQIDY GLVVAGEDATRVQQATLNRLSQDDITRAEYLNEFASLTLGCGAAAAVLGPADRHPEGHRI LGGVTRAGTWNHELCVGDHNGMFTDATGLLTNGMELVINAWNEAHEDGWDWNDMTMYVTH QVSKIHTNEMAKTASLDLDRMPVTFPELGNVGPASLPITLARNADSLKSGDRILAMGVGS GLNTAMTEIVW >gi|294970888|gb|ADNU01000053.1| GENE 9 9041 - 11824 2318 927 aa, chain + ## HITS:1 COG:XF2276 KEGG:ns NR:ns ## COG: XF2276 COG0318 # Protein_GI_number: 15838867 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Xylella fastidiosa 9a5c # 400 926 55 561 563 194 30.0 8e-49 MSHPSQAAFGAAPATTPPDLAEWDPQWSRIVTVPTFDGERSFHVLDTLPALRERGLEPTG TIVALHGNPTWSYLWRRLAQATVDAADEPGARTWRVIAPDQLEMGYSERVEHSNLPTPLG DDPTQRRIAQRVADFDAVISELTAEVSATSGADHPLVTLGHDWGGVLSLTWAARNQDRVA AVMTLNTAVWHDDNENIPAALRAALTGPVLPYSTVRTDAFLRATLALSNSIPPEVANAYR SPYQTAAQRHGIGQFVADIPATSDHPSHGELQQLARDIATIEAPALILWGPKDPVFQERY LRDLRKRLPQADIHRFERTSHLFAEDVDYASTVLQWLAATLPVDGTEAAAGGAADSARTV TGETGPDAATDSNDDLPMIFDALDARHTDPSVASVDMSKDQAISWAQLSHVVDAIALSLQ EKGLKRGDRVSLLVPPGNNLTAAAYAVLKAGGVVVVADAGLGAAGMTRAIKASDPQWIIG EVPGLTLARGAGWPGRRVSVTPLNALTRRLLGVETSMTEMSRRWVKSHEKIDTPHLDDDA AVLFTSGSTGPAKGVRYTHRALGALATVLQRHFDVKPGTGLVAGFPPFALLGPGIGASSV TPNMSVTKPRTLTARALAEAVAAGSCTMVFASPAAYTNVAATADELTDEQRAACAGVEMA LSAGAPVPLELMRKIKSVFPNASVHSPYGMTEGLLLADITADGVAEAMEAASDHGVCVGR PIEGVRFAIAPILPDGSSSEELIELSSPGGSDVAGSEAVGVLGEFVVSADHIKSGYDRLW LTDVESKRDTAGGHTWHRTNDIGHVDAQGRIWVEGRTQHIVTTPYGPVAPGGVEAVVDTV PGVSRSAVVGVGPHGNQALVVVLERTDEMKPGLAGLDITAQIRETVLEKCDLDVAAVLVA KDFLTDIRHNSKINRERLREWAEDQLG >gi|294970888|gb|ADNU01000053.1| GENE 10 11847 - 12650 218 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 19 261 6 237 242 88 31 4e-17 MANAHAHSTSALPISDQIVLITGGARGLGAALTKTFVAEGASVVINYRTSEDAAGELVKS VQGQGGRALAVQADITDFRAVLAMFKYVQEEWNAPVSTVVNNALVDFSFNGDERPHADEI DYEHFDAQFRGSVGGAVNTIQSALPGFRELGSGRVINIGTNLFQNPVVPYHDYTASKAAL LSVTRTFAKDLGPLGVRVNMVSGGLLRTTDASSATPPEVFDGIAASTPLGHVTTPEEFAA AATFFASPASRAVTGQNLVVDNGLVFD >gi|294970888|gb|ADNU01000053.1| GENE 11 12681 - 13256 292 191 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396244|ref|ZP_06806422.1| ## NR: gi|295396244|ref|ZP_06806422.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 191 1 191 191 353 100.0 4e-96 MTARDLGAIRAQLAQDQAQFVAIMVGGADNTMGLDQKKLDAARSSLFSKRLSTLGGHYRG LAVGLKRARSQGEPAWETAQEWHTTHPPADHDTDGASLLFCLAEANQLPPEARADFVGAR IRYRRVKDTAGTRAGNRAGDTGCTGADRTPSTRAKGLPDVKPRVGPFVVSEDGLLAFGWG RWAWIFRRGMR >gi|294970888|gb|ADNU01000053.1| GENE 12 13253 - 14104 578 283 aa, chain - ## HITS:1 COG:CC2906 KEGG:ns NR:ns ## COG: CC2906 COG3220 # Protein_GI_number: 16127136 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 27 270 40 273 289 132 37.0 7e-31 MSSLPAGLGVGWRWEMRQSQAKLTPAFVEVLAENHNPRDLDEHLQVLVDSDVPVVTHGVS LSLGSAEPPDADTLHMLNAVAEACRSPLISEHIALVRAQELDSYDSPHAQVFEAGHLLPV PLTRDQLAVMVDNVNRAQDVLQRPLALEPIATLVEWPDPQMPEGEFVTTLLEETGAALVL DIANVWANATNHGRDPLTDVLAMPLDRIAYCHIAGGSWRGDMYHDTHASPVVQEAMALAH EVVERTGPVPLMLERDSAFPPEDEMFAELNALADIAGVDRITP >gi|294970888|gb|ADNU01000053.1| GENE 13 14101 - 14766 808 221 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396246|ref|ZP_06806424.1| ## NR: gi|295396246|ref|ZP_06806424.1| hypothetical protein HMPREF0183_1922 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1922 [Brevibacterium mcbrellneri ATCC 49030] # 1 221 1 221 221 442 100.0 1e-123 MFDHITGGAFLWFYGALVVLMFFIVWGARVMVSREYARTPNILELAYSKDRRSGVFTTVS TLVCPPARAEYFARNGDVKIFGGLMQQPLIQRALEITDKQEVPEHVYEKLAHDDYSRALV EDLRRGMRETGMLISPKHPALLVAQAAGLALFVLGVARLGVLIFAHEPVWGLLIEVLVVV GILAWAFREKVSNPTKKFRSRNYKQLTNEIRSLDVSSRGRS >gi|294970888|gb|ADNU01000053.1| GENE 14 14820 - 15302 161 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396247|ref|ZP_06806425.1| ## NR: gi|295396247|ref|ZP_06806425.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 129 1 129 160 251 100.0 1e-65 MRHNRLLSDNKTLLRRLAGWFTLAVFLFGLYRIVVGLINDRPVGFLVAMTCSLILLMGFL LYSGPTGAMKRTKGATYVDTMKQMKELEPQSQAFSLGLPLALAVGGVTAAWQLDPTFASV WALPTVPSPSGGGGGSSCSSGSSCSSCGGGGGCGGCGGGD >gi|294970888|gb|ADNU01000053.1| GENE 15 15200 - 15691 289 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396248|ref|ZP_06806426.1| ## NR: gi|295396248|ref|ZP_06806426.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 5 163 1 159 159 320 100.0 2e-86 MNLLMTNVPGPVFLAFYAVLIAICVVLLIVGRVTSGGPLRKTPNVLELAYASGGRMSLVA TVVALLDPPQRLEHLERHGSPDLYRNISTHPIIGRIRQLMEASDLQHLPISKRAEEDHQL KELEKTLPQTCATTGYCQTTRRSCVDWPAGSRLQCFYSGFTAS >gi|294970888|gb|ADNU01000053.1| GENE 16 15838 - 16806 814 322 aa, chain + ## HITS:1 COG:XF1825 KEGG:ns NR:ns ## COG: XF1825 COG0451 # Protein_GI_number: 15838423 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Xylella fastidiosa 9a5c # 1 313 1 321 332 179 34.0 6e-45 MRICVTGASGLLGSGVARALVEQGHHVTTLQRRPSGVDGAQDVLGSVTDPACVEGALTGA EAVIHLAAKVSMAGDSAQFDRVNIDGTRTVVEAAQAAGVNRFVHISSPSVAHTGSSIIGE GAQPANPQTARGDYARTKAQGEIIALNADSDSFPVIVLRPHLMWGPGDTQLTERVIERAK QGRIPILGSGTPLIDTLYSTNAIDAILAALEVVPHTHGEALVVTNGQPRPVGELLNRIAV AGGAEPIRLHVPAGAAKAAGSAIETVWNLTEHDDEPPLTHFLAEQLSTAHWFDQRRTREA LNWTPAVSIEQGLKILAQHYGK >gi|294970888|gb|ADNU01000053.1| GENE 17 17034 - 17738 559 234 aa, chain + ## HITS:1 COG:no KEGG:MTES_0115 NR:ns ## KEGG: MTES_0115 # Name: not_defined # Def: LysM repeat # Organism: M.testaceum # Pathway: not_defined # 92 214 194 319 327 140 61.0 4e-32 MLKTKLPLAIATGVVSVGLFSAPASALPSLTGNAHDHNTSSTDGNVSQPETKPEPRNKAQ NQTKSKSKSKSESKSKSKSKSKPKLPPQPSYLDKDQIENARIIIGVGRAFNVSDRGIQIA LMTAFQESDMYNLDHGDKDSKGLFQQRPKYGWGTEDEVQTRTFAAQSFYGVNPKVKNAGL LDIPGWEKMSLNDAAQAVQRSGYPDRYAQWENLAWRTLKANYDAPKIYHAGPVE >gi|294970888|gb|ADNU01000053.1| GENE 18 17849 - 18217 383 122 aa, chain + ## HITS:1 COG:MT2427 KEGG:ns NR:ns ## COG: MT2427 COG0640 # Protein_GI_number: 15841870 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 34 117 49 132 135 77 48.0 7e-15 MSEKTAVDVSKIHPEGDCDIPSEFSSQKNISLTAELFKALATPSRLKILLTLSHGPASVS NIVIATELSQPLVSQHLKVLRGIHLVSVQRDGREAIYSLMDDHVAHIILDAMAHVNELEH AN >gi|294970888|gb|ADNU01000053.1| GENE 19 18299 - 19519 1200 406 aa, chain - ## HITS:1 COG:Rv3565 KEGG:ns NR:ns ## COG: Rv3565 COG0436 # Protein_GI_number: 15610701 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium tuberculosis H37Rv # 13 399 4 384 388 325 46.0 7e-89 MNSSQPLPSTLTRISDRAKVVRPFSVMNILQRVAELEAQGRDIISLCVGEPLQGAPKAVR TRAADIMTDGTSLGYSPAAGILPLREALSGHYKRWYGLDIPAERFFVTTGSSGAFLLSFL ACFDAGDRVALARPGYAAYKNILAGQGIEVVELDCGPDERFQPTVELLDQAHSEGALAGV MLASPANPTGTMIPGEQFEQLSKWCHSHDVRIISDEIYHGITFTDSIGDCALQFNDDAIV ISSFSKYWGMTGWRLGWAVLPENLVDTIAGLAGNYALCAPVPAQHAAIEAFSESAYAEGE EALARFARARQNVLDAAPSLGWRDLAPADGAFYMYGLVEDVLGPYETATQWCSALLETEG VAVSPGLDFDNVNGDKWVRISLAAGPEAVAEALRRIAKFQAAYLTD >gi|294970888|gb|ADNU01000053.1| GENE 20 19545 - 21200 1005 551 aa, chain - ## HITS:1 COG:DRA0277 KEGG:ns NR:ns ## COG: DRA0277 COG2225 # Protein_GI_number: 15807939 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Deinococcus radiodurans # 3 498 11 494 521 360 40.0 5e-99 MFTVNGPHISGVDNIFTPAACDFLDELHRVFYARRRELLAARNASRGGFENGDLPTFDPA TSDIRSGDWKVVGTSGAPGLKRRVVELATPVEPREAAKSCNSDADVWMADLEDGMAPTWS NMVTAHECLMRAARGDFAFQSRSGKTFKARNPHPPTMVLRPRGWNLTEDHLTWTDTTGRA HPASATLVDFGLFVFHNSRPLLKRNHGPYFYLPKVENRHEARLWNSLFEHAQETLGFDRG TIRATVLIESVTAAFQMDEILYELRDHVVGLAAGRWDYVGSLVTHFGLRDGFTVPQRDEI RSDSPFIRAFTDLLVSTCHRRGAQALGGLSTAVVESAHLPVAEPHERERVYEDKLAEVSA GFDGTWIAHRSLIDVVRAAYGKARADRASVPAAEVVATDRVDLTEQLLTVPTGVISEEGV RWNLRVCLHYINAWLRGVGSVGYDGYVEDASTAELARLQLWQWTRQGVTLEDGRMLSQAL VTRFLVEELAVLPRTNADHFDEAEDFIHSALRSEGAPEPFYPVAYRDHMVFRGASVLNPS RANAPGVSRAA >gi|294970888|gb|ADNU01000053.1| GENE 21 21313 - 22590 1331 425 aa, chain - ## HITS:1 COG:MT0483 KEGG:ns NR:ns ## COG: MT0483 COG2224 # Protein_GI_number: 15839856 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Mycobacterium tuberculosis CDC1551 # 7 425 9 427 428 651 75.0 0 MTNELHNADAIRSDWATNPRWSGVARDYTADDVVKLRGSLIEEHTLARHGAERLWSLVHS EDFVNALGALTGNQAVQQVKAGLKAIYLSGWQVAADANLASQTYPDQSIYPANSVPAVVR RINNALMRADQIETSEGNKSVEDWLAPIVADAEAGFGGALNVYELMRGMINAGAAGVHFE DQLGSEKKCGHLGGKVLVPTAQHIRTLNAARLAADVENVPTLIIARTDAEAATLITSDVD ERDQKYLTGERTAEGYFKVNNGLQPCIHRGLAFAPYSDLLWMETSTPDLDVARQFAEAIK AEYPDQMLAYNCSPSFNWKKHLDDDTIAKFQRELGAMGYKFQFITLAGFHALNYSMFDLA HGYAREQMKAYVELQEREFGSEERGYTATKHQREVGTGYFDLVSTAVNPQSSTTALKDST EAAQF >gi|294970888|gb|ADNU01000053.1| GENE 22 22772 - 24280 676 502 aa, chain + ## HITS:1 COG:no KEGG:Celf_2829 NR:ns ## KEGG: Celf_2829 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.fimi # Pathway: not_defined # 32 500 16 486 488 547 59.0 1e-154 MGEHTPHAHRPGTNAAGPETASAESATQGTADALSIGRKIRHFRTEQGLTLEQLGERVGR AASQISAFESGNREPSIAVLTALAKALDTSAAELLDPTPVSQRQALELEAERAQRSPLYS SLNLPTVRVKSLPNDALEAIVGLQRSLHDMTKKRAATPEEARRTNRLLREKMRSRGNYFG ELEEQARKVLAHIDYHGGPLSRRDAAHIAERLGFNLHYVSDLPRSVRSLSDTLNKRLYLS NDDAVGTDPRSNLLTALASAILEQKPPSNYQDFLTQRVEANYVAAALLIPEKAAVPFLQT AKKSRRISIEELRDYFGVSYETAAHRFTNLATEHLDLPVHFMKVHIDGTVHKAYSNDGLP FPTDPLGAVEGQYACKRFSSRTVFTIADRFSPYFQYTDTPEGTYWCTARVMPGAGDFAIS MGVPFAHVKWFEGRDTEVRSKSWCPDPSCCRQPPEWLEEKWADASWPSARTHSSLLAAVP PGVFPGVDSTEVYEFLERHSRE >gi|294970888|gb|ADNU01000053.1| GENE 23 24441 - 25247 543 268 aa, chain + ## HITS:1 COG:MT3321 KEGG:ns NR:ns ## COG: MT3321 COG1028 # Protein_GI_number: 15842812 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis CDC1551 # 1 255 10 262 282 248 52.0 7e-66 MSGGSRGIGLAIAKRAAQDGAQVSLLAKTDTPDPRIPGTIHTAVQEIEEAGGTAHPYVGD VRDIDRVQDVVKECAEAMDGIDIVVNNASAIDLRGFSEVPNKRWALMKDINIGGTLNLIS SALPTLLESSSPRVLTLSPPINLNPTWLGAHAPYTVSKYGMSILALGLAEEQRANPDFSS FCLWPRTLIATAAVANIVGGEEGMRAARLPQIMADAAYSLLTRPAADTSGRAFIDEEVLR EDGVTDLSEYAAVPGTPDDQLETDLFLD >gi|294970888|gb|ADNU01000053.1| GENE 24 25279 - 26094 668 271 aa, chain + ## HITS:1 COG:no KEGG:Mflv_4597 NR:ns ## KEGG: Mflv_4597 # Name: not_defined # Def: wyosine base formation # Organism: M.gilvum # Pathway: not_defined # 8 270 5 265 270 190 43.0 4e-47 MTNNSALIRELLSVLQDERQTVLDVLAASPSAFWTAQTPAEGWDVRDQIIHLAHFDYMAG LALSDPQSFIASVKKIKDLDAYVDLIGPANASRSNENILQWWERQADFLARSAVACVEGA VEDSPRAPWFGVSMSPASMITARIMETWAHSQDVLDTAGVKRASSVALDHIAYLGVRALP NSFIARGEEVPTVPVRVELVGFDGKPLEFGPEDAEDVVSGSVEDFALVVTQRRHVADTGI STRGPVAEKWMRIAQAFAGTPGAGRAPGQFA >gi|294970888|gb|ADNU01000053.1| GENE 25 26504 - 27010 435 168 aa, chain + ## HITS:1 COG:MT1003 KEGG:ns NR:ns ## COG: MT1003 COG1960 # Protein_GI_number: 15840401 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 1 165 171 379 382 208 53.0 4e-54 MRTGAAGSQGISLIVVPTDTPGFTVAKTLDKLGWRSSDTAELVYQDVRVPIENLVGEENK GFQLISQAFVTERLTLASQAYATAQRCLDLAIQWTRDRETFGQPLITRQAVEGAEWVVYQ AQQLFGGLGYITEAEVEKHYRDIRILAIGGGTTEILMTLAAKKLGMVG >gi|294970888|gb|ADNU01000053.1| GENE 26 27060 - 28604 1111 514 aa, chain + ## HITS:1 COG:Cgl0284 KEGG:ns NR:ns ## COG: Cgl0284 COG0318 # Protein_GI_number: 19551534 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 1 509 3 505 512 318 35.0 2e-86 MKITIGSWVSGNAVRHPDNVALIDAETGQSLTYRALNERTDQLASSLSNAGVSQGDRVAL VTLNSTDMLEVIIAVSKLGAVSVPINFRLTSREIRFILEDSGAVLCFASDVFMPTVTPAA EGLDIKQVVSVPSKMSQQPRDASTYDVFLASGGDGVQSPPAEWNELAMLMYTSGTTGNPK GAMLTNGNLFANSIQSAERTLGVRMDDINLSVAPLFHIGALGIHTLPLLYWAGCTVIAEA FDPETWAAQVEKYRATKTFLVPTMWHTVVASGALDRHDMSSLNIGFSGGAPCPVALIEKL IEHDIPIIEGFGMTETSPVVSFNDAKTAVTKAGTIGRPVMHVEMRVVDASRNDVPVGEVG ELALSGPSIISAYWNRPDTNATSFEDGWFFTGDMAKVDEDGYWYIVDRKKDMLITGGENV YPVEVEQMLYRHDAVAEVAVVGTADETWGEVVTAYIVLAGGHTPSDELATRIEEFSREHL ASYKIPRRIRFVDELPKTATGKIRKTLLRSEGFA >gi|294970888|gb|ADNU01000053.1| GENE 27 28744 - 29409 541 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396261|ref|ZP_06806439.1| ## NR: gi|295396261|ref|ZP_06806439.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 131 221 1 91 91 180 98.0 5e-44 MMNKLHIRSTIVAVAVAVAASLSLTGCGLLSEQTQPQEGQGTEQQPQGEGTAPDQGSAPD QGAAPDQGSAPDKGTAPDQGSTGSSNSGTSNQGSGSSGSSSSGGSSSGSNSSGGGTGDSQ DTSNKASDTRVKIDSKGNGVIPKAAIEDDIYDLMKNKYNMKLTAVECLGDVKVYQGRGSQ SCELKTPDRPYFGTVIVKGINKGMIQYQIKFPSLPDDVKVN Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:01:47 2011 Seq name: gi|294970884|gb|ADNU01000054.1| Brevibacterium mcbrellneri ATCC 49030 contig00060, whole genome shotgun sequence Length of sequence - 2103 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 23 - 439 385 ## AARI_03770 hypothetical protein 2 1 Op 2 . + CDS 508 - 1092 610 ## Mlut_00160 hypothetical protein 3 2 Tu 1 . + CDS 1573 - 2101 470 ## Mlut_00160 hypothetical protein Predicted protein(s) >gi|294970884|gb|ADNU01000054.1| GENE 1 23 - 439 385 138 aa, chain + ## HITS:1 COG:no KEGG:AARI_03770 NR:ns ## KEGG: AARI_03770 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 1 138 354 491 491 190 76.0 2e-47 MVYPKFLSPALLSTGVQRSMSLICTPMRTDQAARDIRKEKTEYVSDAAQRARIGQIEDAS QRAEYQDVLQQEADLTAGHGVLRYTGQLSVSAPTVAELDAAVAAIEQATVQASCETRRLV GQQAQAFTAAALPLCRKV >gi|294970884|gb|ADNU01000054.1| GENE 2 508 - 1092 610 194 aa, chain + ## HITS:1 COG:no KEGG:Mlut_00160 NR:ns ## KEGG: Mlut_00160 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 194 1 190 288 87 33.0 4e-16 MPTDPTEQAETARTTLRLLAEATRRVDDPDQLYAVIDNIRGGVQALQETLAQLADAHTLH QARAISLNGDPVTGQITAAYAHAVLQGAAAGLSGVEAQRREATDLTDHMDWTPAPSPVAE EIDPAQAHERLSERGVWRTVTLQEGRTAATTMRLLEEHGAEAAVAYLAQADHGDPDIIRE LDYGYAYDEPPSGR >gi|294970884|gb|ADNU01000054.1| GENE 3 1573 - 2101 470 176 aa, chain + ## HITS:1 COG:no KEGG:Mlut_00160 NR:ns ## KEGG: Mlut_00160 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 176 1 184 288 176 53.0 4e-43 MPTFYDPVADAGEASQALRGLAHASRDFEHPQDLYGVLGDLLSGVRSLRQVLDQLATAHI SHIADAHDDVGSHDVGVHNAQAAASMLRESSALVDQAEDHLNNAMSAAGRIAWHDPGANA PSERWISVVRLEGDQARAVFDRMHGEGVDSGLDHLKTWDRGEETTTEALENGYVYD Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:01:58 2011 Seq name: gi|294970881|gb|ADNU01000055.1| Brevibacterium mcbrellneri ATCC 49030 contig00061, whole genome shotgun sequence Length of sequence - 988 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 749 311 ## 2 2 Tu 1 . - CDS 564 - 938 247 ## Ksed_06590 hypothetical protein Predicted protein(s) >gi|294970881|gb|ADNU01000055.1| GENE 1 3 - 749 311 248 aa, chain + ## HITS:0 COG:no KEGG:no NR:no EVVVGDLERRVEVDEGVVLVAIGEPFGVMEDGELRAACLVGGAEHALPSLFGDAGDAHGV CDHRPRVAGLPGGAFAHHLESRGDGLPGVEVMLLGQGPVLLRGELHQLRGDRIVIPCPWT GLVEPVQERAQSLAGPEVLAPGPVLRRLVRVRCHDRHLLQDRYVRHPQVRTPDAVIAESM AVALFVPLGHPDPGPGRTSVGAASTAERGHRRQLARQRLRPLQQWVADAVGQLGVQIDPA PDDAGGMP >gi|294970881|gb|ADNU01000055.1| GENE 2 564 - 938 247 124 aa, chain - ## HITS:1 COG:no KEGG:Ksed_06590 NR:ns ## KEGG: Ksed_06590 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 7 117 181 305 311 69 38.0 4e-11 MISTQDDQERPNPHEREQTLERESAGTPDAVEEADVAKKADEAEKAQKHRAKGVEWVRMS DLMSRHTSSVVGRGIDLHTELTHRVRDPLLERAKTLARKLPPVSAFGRRGGPDRGPTRSG VGMP Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:02:22 2011 Seq name: gi|294970858|gb|ADNU01000056.1| Brevibacterium mcbrellneri ATCC 49030 contig00062, whole genome shotgun sequence Length of sequence - 19055 bp Number of predicted genes - 22, with homology - 22 Number of transcription units - 12, operones - 8 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 49/0.000 + CDS 91 - 1017 1037 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 2 1 Op 2 44/0.000 + CDS 1010 - 1957 764 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 3 1 Op 3 44/0.000 + CDS 1961 - 2971 736 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 4 1 Op 4 . + CDS 2955 - 3971 868 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 3987 - 4030 13.1 5 2 Op 1 . - CDS 4022 - 4522 343 ## gi|295396274|ref|ZP_06806449.1| hypothetical protein HMPREF0183_1947 6 2 Op 2 . - CDS 4543 - 5184 760 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 5151 - 5210 2.9 7 3 Op 1 . + CDS 5276 - 5557 292 ## gi|295396276|ref|ZP_06806451.1| quaternary ammonium compound-resistance protein SugE 8 3 Op 2 . + CDS 5554 - 5907 306 ## COG2076 Membrane transporters of cations and cationic drugs 9 4 Op 1 . - CDS 5880 - 6665 825 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 10 4 Op 2 . - CDS 6723 - 7352 499 ## COG1435 Thymidine kinase + Prom 7351 - 7410 1.8 11 5 Op 1 . + CDS 7439 - 9658 2354 ## COG2838 Monomeric isocitrate dehydrogenase 12 5 Op 2 . + CDS 9663 - 10085 477 ## COG5416 Uncharacterized integral membrane protein + Term 10100 - 10149 14.2 13 6 Tu 1 . + CDS 10197 - 10562 361 ## COG4859 Uncharacterized protein conserved in bacteria 14 7 Tu 1 . + CDS 10700 - 11428 776 ## COG0428 Predicted divalent heavy-metal cations transporter 15 8 Op 1 . - CDS 11415 - 12236 398 ## Lxx21980 hypothetical protein 16 8 Op 2 . - CDS 12233 - 13414 681 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Prom 13403 - 13462 2.5 17 9 Op 1 . + CDS 13577 - 15343 1615 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis 18 9 Op 2 . + CDS 15340 - 16044 504 ## COG2120 Uncharacterized proteins, LmbE homologs 19 10 Tu 1 . - CDS 16045 - 16536 465 ## COG2077 Peroxiredoxin 20 11 Tu 1 . + CDS 16626 - 17603 1036 ## COG2354 Uncharacterized protein conserved in bacteria 21 12 Op 1 . - CDS 17545 - 18480 779 ## COG2035 Predicted membrane protein 22 12 Op 2 . - CDS 18507 - 18959 406 ## COG2166 SufE protein probably involved in Fe-S center assembly Predicted protein(s) >gi|294970858|gb|ADNU01000056.1| GENE 1 91 - 1017 1037 308 aa, chain + ## HITS:1 COG:MT3766 KEGG:ns NR:ns ## COG: MT3766 COG0601 # Protein_GI_number: 15843279 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mycobacterium tuberculosis CDC1551 # 1 307 1 307 308 286 51.0 3e-77 MGAYVIRRILQIIPVVIGTTFLIYLMVWGLQSDPFVGRCGERACPEAYVQMMRAKYNLDD PLLISYAKYFLNLITGDFGTTFSGIDVTDQIKNRFPTTFRLTIIAIVFEAVIGIAAGVWA GLRRGKFIDSLVLVSTLVVISIPVFVIGRVLQLYLGMQWQIFPATASPEGKWSELILPGF VLGSASIAYVARLVRNSIAENMRSDYVRAATAKGLTQTRVVGVHVLRNSMLPVVTFLGTD FGALLGGAIVTEGIFNVSGLGGMVFGALNGREGQTVTSVVALFVLVYLLVNLAVDVLYAW LDPRIRYE >gi|294970858|gb|ADNU01000056.1| GENE 2 1010 - 1957 764 315 aa, chain + ## HITS:1 COG:Cgl1946 KEGG:ns NR:ns ## COG: Cgl1946 COG1173 # Protein_GI_number: 19553196 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 24 315 57 342 344 256 46.0 5e-68 MSNPESLTVAETAPVQDPIKPDGGDAPRATSLTGDAFRSMFKRPLFWITAGVLLLFIVMA IVPELFTSKNPNECSLLRTKQLPSSEAIFGYDVRGCDVYARTIHGARASILVGVLTSIGV LSIGVTLGAIAGYYRKFADMLISRLGEIFAGIPVLLAGLLVLVSFPTTPQTPYFITILKV VIALALFGWPGLMRMMRSTVLQVAQMDYVQSARALGASGWRMMLKHVIPNAIGPVIVIAT INLGVYIAAEATLSFLGIGLQGNVVSWGIMISDSQSYMRVAPHMMLFPAAALSLCVFSFI VLGDIVRDAFDPKSR >gi|294970858|gb|ADNU01000056.1| GENE 3 1961 - 2971 736 336 aa, chain + ## HITS:1 COG:CAC0179 KEGG:ns NR:ns ## COG: CAC0179 COG0444 # Protein_GI_number: 15893472 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Clostridium acetobutylicum # 9 330 3 324 325 342 50.0 6e-94 MDNNDSAKQPLLDVRNLTVEFRTQQGVVKAVNGVNYSVDEGETLAVLGESGSGKSVTAQA IMGILDTPPGFVTGGEVLFRGRDVLKMSKEDRRKVRGQNIAMVFQDALSSLNPLFPVGWQ ISEVLRKRKGMNRKDARERAIELMKRVRIPAAADRVGDYPHQFSGGMRQRIMIAMSIALD PDVLIADEPTTALDVTVQAQIMDLLKELQEERGMGLVLITHDLGVVADVADKIAVMYAGR IVESAQVHDIYRQPAHPYTEGLLASIPRVDMKGQDLAAIKGLPPNLLNLPAGCEFAPRCP YAMDTCRAERPSKQEIVPGRFVTCHRAEEVFNGTAK >gi|294970858|gb|ADNU01000056.1| GENE 4 2955 - 3971 868 338 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 315 6 314 329 338 54 1e-92 MAQQSEPILQVRDLTKHYPLTKGAVIKRKYGAVKAVDGVSFDLYPGETLGVVGESGCGKS TMARLLMGLEKPTSGEVLYRGEPVFGRSGASLKRMRRNVQIVFQDPYTSLNPRMTVGDIV GEPLEIHPDVVPKNKRAERVRELLELVGLSPDLINRYPHQFSGGQRQRIGIARGLALNPE IIICDEPVSALDVSIQAQVMNLLGKLQKELGLAYIFIAHDLSVVRHISDRVGVMYLGRFA EIGDETDIYENAGHPYTQALLSAVPVPDPEARESKKQIVLQGDPPSPANPPSGCRFRTRC WKAQEICATELPELKIREDSDVKHATACHFPSIDPGVE >gi|294970858|gb|ADNU01000056.1| GENE 5 4022 - 4522 343 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396274|ref|ZP_06806449.1| ## NR: gi|295396274|ref|ZP_06806449.1| hypothetical protein HMPREF0183_1947 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_1947 [Brevibacterium mcbrellneri ATCC 49030] # 1 166 10 175 175 295 100.0 1e-78 MRWTWLITSAVVVVAVGSILWQEFSVRGVALCGLPVLFACGAWIFYGRPNVTLTDTGVRV INPVRSTEVESTSVTSVDTTYGLQLRCSGKKINAWALTDMGSKKARTERAAGIAPALPEI EMVTSHLTNVKKSKAETPPPQQKVDALPLVLIGISLAWFVWGMTAL >gi|294970858|gb|ADNU01000056.1| GENE 6 4543 - 5184 760 213 aa, chain - ## HITS:1 COG:ML1391 KEGG:ns NR:ns ## COG: ML1391 COG0491 # Protein_GI_number: 15827726 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium leprae # 6 213 25 232 232 155 41.0 5e-38 METLELNDVTIRWISVSDMENNVYLITSKKTDKQVLIDAANDTAQIEKLVKEHGNGTLEA VLTTHSHPDHVQSLAEIARMFDARTLAGLYDVSEIESQTGIEIDEQLANDDMLEFDGFRL RAVHLKGHTPGSIAYVLRDYPGEQRFIFSGDSLFPGGPGKTTNPEDFTQLMNDLETRIFE PFADDTVVLPGHGVRTELGAERPHLDEWRQRGW >gi|294970858|gb|ADNU01000056.1| GENE 7 5276 - 5557 292 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396276|ref|ZP_06806451.1| ## NR: gi|295396276|ref|ZP_06806451.1| quaternary ammonium compound-resistance protein SugE [Brevibacterium mcbrellneri ATCC 49030] quaternary ammonium compound-resistance protein SugE [Brevibacterium mcbrellneri ATCC 49030] # 1 93 1 93 93 118 100.0 2e-25 MFEVVWAFALAARSMKLWLRAVIFVIGGVVSMGGLALALRTIPVGVGYAVWIGAGAVTTV VVSFIRGHEKPTALRLVCVFLVVAGVVGLQVMA >gi|294970858|gb|ADNU01000056.1| GENE 8 5554 - 5907 306 117 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 99 51 154 155 63 39.0 9e-11 MNWFILFISGALEAVWAHALAGDLPYAPVWFVIGLCLSLAGLSYAMRTIPMGTSYAVWSG VGAATTAVWAALRGEPFGPGTILCLIAIIAGVVGLQLATRSAKPSGKTSQDAMNDTK >gi|294970858|gb|ADNU01000056.1| GENE 9 5880 - 6665 825 261 aa, chain - ## HITS:1 COG:Cgl2342 KEGG:ns NR:ns ## COG: Cgl2342 COG0596 # Protein_GI_number: 19553592 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 14 255 12 250 251 126 36.0 4e-29 MKPLAYRILNATDSDLPLLILGTPLGTASTVWASVGYRLVEHFRVVITELPGHGLDAANA PENGEATNLTVDQIAQRTVAVADSLDAQKFFYAGCSISGGVAQILALDHADRVERVAAVC TAPKFGDPETWHDRIETVREDGTRSLLPDTADRWFAAGFLDDDIAAGHMVLEDMATTSDQ AYIACCAALATYDITDRVPNIDIPILYMAGAQDFGNDPDSMRELSRQTPHGTFAVIPDAA HIVMVEHPELVADHLVSFMAS >gi|294970858|gb|ADNU01000056.1| GENE 10 6723 - 7352 499 209 aa, chain - ## HITS:1 COG:mlr2747 KEGG:ns NR:ns ## COG: mlr2747 COG1435 # Protein_GI_number: 13472449 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Mesorhizobium loti # 1 205 1 190 203 147 45.0 1e-35 MAKLYFRYGAMNSGKSTALLQAAYNYEERGQRVLLAKPAIDTKGNTQIVSRLGVTRTVDF LIDPTDTVEDVFDDVAGYVDRSALLETLDFSTDPVACLLIDEAQFLTNEQVDGLMRIAVC RNVPVMCYGIRTDFRTHAFPGSARLLEIAHSLEELKTICRCGRKAMFNGRKVDGNYVFDG DQVAIDGMSVTYESLCPACYLKESGGVLQ >gi|294970858|gb|ADNU01000056.1| GENE 11 7439 - 9658 2354 739 aa, chain + ## HITS:1 COG:Cgl0644 KEGG:ns NR:ns ## COG: Cgl0644 COG2838 # Protein_GI_number: 19551894 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Corynebacterium glutamicum # 1 739 1 738 738 996 68.0 0 MAQIIYTRTDEAPLLATYSLKPIIEAFARKAGIDVTTRDISLASRVLAQFPDYLKEDQRH SDALAELGDLAKTPEANIIKLPNISASVPQLKATIKELQSQGFAIPNYPEEPSTDEERDI RARYDRVKGSAVNPVLREGNSDRRAPKAVKQYAQAHPHSMGEWTADSKTQVATMGENDFR SNEQSVIMPADDTLTIRHVGAAGTSVLKDDLKVLKGEIVDSTFMDVARLDAFLKEQVAKA KETGVLFSVHLKATMMKVSDPILFGHVITTFFPQTFANYGDVLAKAGLSPADGLGAILAG LDELDGDDAEQIKESISKELEEGPALAMVNSDKGITNLHVPSDVIVDASMPAMIRIGGKM WGPDGNEADTLAVIPDSSYAGVYQTVIDDCKAHGAYDPATMGSVPNVGLMAQKAEEYGSH DKTFEIKEEGTVEVVNSAGEVLMSHKVSAGDIWRACQTKDIPVRDWVKLAVTRARLSETP AVFWLDETRAHDRNLIEKVNEYLKEHDTDGLDIRIMNPVDATQFSLDRIREGKDTISVTG NVLRDYNTDLFPILELGTSAKMLSVVPLIAGGGLFETGAGGSAPKHVQQLVEENHLRWDS LGEFFAIAESLRHFKLSDGNERAGVLASTLDDATATFLEENRSPSRKVGEIDNRSSHFYL TLYWAEELAKQTDDAELAQAFEPIARELREQEEAITKDLIEVQGEGVDLGGYYNPDDAKV TEVMRPSTTFNDIIAKLGR >gi|294970858|gb|ADNU01000056.1| GENE 12 9663 - 10085 477 140 aa, chain + ## HITS:1 COG:Cgl1974 KEGG:ns NR:ns ## COG: Cgl1974 COG5416 # Protein_GI_number: 19553224 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Corynebacterium glutamicum # 50 139 73 159 161 58 47.0 5e-09 MSNPQATPPSFGSGPGSLGSGPQAPHSAPPVADGAQAPEAPQIDGPVYDKPAQSTKQEKS GVSAFIWVALILGALILVLLLVFVMQNNQPVDISYFAWSFSMPLGVALLLAAIAGILIAA IIGTVRIILLGRRLKRAQKR >gi|294970858|gb|ADNU01000056.1| GENE 13 10197 - 10562 361 121 aa, chain + ## HITS:1 COG:FN0232 KEGG:ns NR:ns ## COG: FN0232 COG4859 # Protein_GI_number: 19703577 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 21 85 1 65 65 58 36.0 3e-09 MSKYIEFIPNAGACAVSKNVLSGEGKVRWMVRGESHAPADNGWQILSDIDTSDYLNDPSN WQIADFNDLCAIEPALIGIWDMPVGSDLELLRHEKGMSIIDSKTGRVIPQEELFVPPQFR D >gi|294970858|gb|ADNU01000056.1| GENE 14 10700 - 11428 776 242 aa, chain + ## HITS:1 COG:Cgl1400 KEGG:ns NR:ns ## COG: Cgl1400 COG0428 # Protein_GI_number: 19552650 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Corynebacterium glutamicum # 3 241 16 267 268 207 53.0 1e-53 MAAGLATGLGALLGVTNLARSARFFSGALGFSAGVMIYVSLVEILPEAIESVENPAAPWI AVGALFGGIVFAAVIDALVPDHINPSTTTTSDVRLLRMGVFTAIAIALHNFPEGFATFLT ALTDHTLAIPIVVAIAIHNIPEGLAVAVPILHATGSVAKAFRWALLSGLAEPAGAVLGYL ILAPFMTPTIFGIVFAGVGGIMVYISFSQLLPAAHNQGHPRAPLFGLFAGMAVMALSLLM LG >gi|294970858|gb|ADNU01000056.1| GENE 15 11415 - 12236 398 273 aa, chain - ## HITS:1 COG:no KEGG:Lxx21980 NR:ns ## KEGG: Lxx21980 # Name: not_defined # Def: hypothetical protein # Organism: L.xyli # Pathway: not_defined # 39 272 39 317 319 64 26.0 6e-09 MIGVVAHPARRGTRQVVERLRAASSSVATTSAEVVVTYTTPAHPGGEQARRLLDAGAQRL VVVGGDGTVAQCAHAVIEWIDERQPAVPPRLIPIPVGSANLFWRNLVATFPPGPADVDVA RVTLHPSGSTTTSLVAVGVGNSVRAIQRTPAQKHWWSYILAGVRLWSWTGNPWTEEVGNI AGVPHRVRIFDSRLDSGSLCHTVFSPTTLADWACAGAWAVGAGREPAAIRAHVGESFDLD APHGLHVDGEVYTKVRGARVQVRPRALPVLIPA >gi|294970858|gb|ADNU01000056.1| GENE 16 12233 - 13414 681 393 aa, chain - ## HITS:1 COG:BH3007 KEGG:ns NR:ns ## COG: BH3007 COG0791 # Protein_GI_number: 15615569 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus halodurans # 85 393 28 334 336 244 41.0 2e-64 MKTFATSAILAATLVAGTVTPAFATEPTNHVYLLTGNVRDHNVQEAKPRKHKEPAPVVKE PNLSEPKTQAPAPMPKAPVVARHGDVRKGDTAYVVVSAATLWKSPSSPRKQDAPALQNPA KMDEWNHGLTDRKGLTGRTETQAIYGDAVYVWDVRGEWARVGVTTEPAPGKPRGYEAWVP KRQLAKSPAFGDASKKLTHVVSVKKSRAYVEAEPTKTTGRTRIEVPFNTRLPITNTRDGK ARVALPDNRFGWISFNDVERFDQRENLPKPKSSQLVETGRQFLGLKYTWGGTSSYGFDCS GFTYSIYRAHGITIPRDSGPQSKMGRTVSQRDMQPGDLIFFASKRGKGSVYHVGMYIGHG KMIHAPNASRSVEIVNWKSWGGARDFAGVKRYV >gi|294970858|gb|ADNU01000056.1| GENE 17 13577 - 15343 1615 588 aa, chain + ## HITS:1 COG:MT3918 KEGG:ns NR:ns ## COG: MT3918 COG5479 # Protein_GI_number: 15843433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 238 575 199 503 539 181 33.0 3e-45 MKRFFVSAVALSAAVASLAPATTHSALPFDPGAEPFQTQIRTNPSAYDAHSQSSAKMSDQ NAPVTTTQQNVDGAQQTINTTKANSQKNNSRLITVMGVTWEGEGERNVQYRTRHAQGENW GEWEQMPVSDEGRDPNSDEHNESTDAVVVAPYEVVQVKSDGPVKVSVSVTERTQADDIIA GHAIDRPLHDTGSDTPDQPADPGELGATSATNTTYNAQAANGAFEANNVAKVDGLEYVTR SQWGASRPRCDIDHAKRNEGVVIHHTNGASKYSQGEVPGILRGIQAYHQKSRGWCDIGYN MLIDRFGKIYEGRAGGLDKATVGAHAVAVNEGTFGVSVMGTYNKPAPREVVDALSRVIRW QSQKWGWNVNSNMRIRSAGGPGAKKPKGAMFNVPRVIGHRDVGSTDCPGDGLYGQIPEIR RLSNGNPIDEYANKHNLGKPSSGEVTLKFRNDTKARNYGSRLVVSNDRGTYRIEGAILDA WKKMGWERSRLGLPITDAICGLPDGGCYQSFENGVVHWSKGSGAHATYGAIHDEWAKNKY ERGPLGYPVGDEVTKNGSASQKFQYGTITWSKKDGAKARVPKVSGNAK >gi|294970858|gb|ADNU01000056.1| GENE 18 15340 - 16044 504 234 aa, chain + ## HITS:1 COG:Cgl1059 KEGG:ns NR:ns ## COG: Cgl1059 COG2120 # Protein_GI_number: 19552309 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Corynebacterium glutamicum # 10 232 11 232 234 173 44.0 3e-43 MTLKHFDDSDLERVLCVVAHPDDMEYGGSACVAKWVKQGARVRYVLLSAGEAGIRTIAPD ECKRIRVAEQEEACRIVGAELTVLEFPDGLIEPTHEVREAITREIREFRPDAVMTINFDL KARWGLNHVDHRACGVATVDAIRDADNPWIFQGAGEPWKAHQLLVTGADDPTHYVDVSGE PFEAGVASLAAHRVYLDNLGDDYPTARELFDQFTAGTGTEVGVANALAIRVYDM >gi|294970858|gb|ADNU01000056.1| GENE 19 16045 - 16536 465 163 aa, chain - ## HITS:1 COG:Cgl1062 KEGG:ns NR:ns ## COG: Cgl1062 COG2077 # Protein_GI_number: 19552312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 1 163 4 168 168 194 60.0 5e-50 MATITFQGNPVTTNGNLPTGSAPEFELTGTDLEPVALSDYKGKRVVLNIFPSVDTGVCAK SVRTFNEKATELENTVVICASKDLPFALGRFCGAEGIDNVVSGSGFRSPFGDDYGVEMTD GPLKGLYSRAVVVIDENGKIVYSQQVEEIGEEPDYDAALNALN >gi|294970858|gb|ADNU01000056.1| GENE 20 16626 - 17603 1036 325 aa, chain + ## HITS:1 COG:Cgl1064 KEGG:ns NR:ns ## COG: Cgl1064 COG2354 # Protein_GI_number: 19552314 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 315 1 306 318 275 56.0 1e-73 MSGGLVALLDDIAAIARMAAASVDDVAVGAAKTSAKAAGVVVDDAAVTPQYVSGVEPARE LPIIRKIATGSIVNKLVFILPLALLLSAFAPFLLTPLLMIGGTYLCFEGAEKIWHKLTHR TGHDDNPAQEESNQEKQAEHPVREDAAEKQLVRSAIVTDFILSTEIMVISLNEVISEPLL MRTAILVAVALFITIAVYGVVGLIVKMDDIGLRLAQKPATQKLGTFLVNAMPKLLSTLTI VGVFAMLWVGGHILLVGADELGLHLPLHIAHAVGHIFIDIPAVGGVLNWLGETVVAMVVG FVWGLLVIAVVAAVKATARAFRPQS >gi|294970858|gb|ADNU01000056.1| GENE 21 17545 - 18480 779 311 aa, chain - ## HITS:1 COG:Cgl1302 KEGG:ns NR:ns ## COG: Cgl1302 COG2035 # Protein_GI_number: 19552552 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 3 300 28 310 326 177 38.0 2e-44 MPFDFVRGFLIGLVELVPGVSGGTIALVTGIYDELIASAVAFLHACKRLVTGPDRVHGFM HELRNVQWGLLIPVFLGMVTAVFSIAGIMSSFVTNSPEHARGLFFGLVIVSIYVPVSMAY DSAVERHINTAKTWIGGAVAFVIATIVAFVLVGQAGGGVVAHPPAWIVIVTAAIAICALV VPGVSGSFFLLAVGLYTTTLDAVHQRDWGYLGVFMLGAVIGLASFVQLLQFLLKRFRLVT LMAMAGLMLGSVRALWPWQQSPDPSAPGELVAPYAPVAGPILLMLVGGVIVVVMIVVEKL VQSPSPQPQQQ >gi|294970858|gb|ADNU01000056.1| GENE 22 18507 - 18959 406 150 aa, chain - ## HITS:1 COG:MT3383 KEGG:ns NR:ns ## COG: MT3383 COG2166 # Protein_GI_number: 15842875 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Mycobacterium tuberculosis CDC1551 # 1 146 1 141 143 128 53.0 4e-30 MTLSADVPSELHDIVRDFAQTPEEQRLELLLEFSDEIPELPQRYADNPDLLEPVPECQSP IFFIAEVDGTGEDARVSLFFSAPAEAPTTRGFAGILTEGLDGATARQVQAVPEDFALQLS LTSLVSPLRLNGMTGMLARIQRQVKEKAQL Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:02:44 2011 Seq name: gi|294970854|gb|ADNU01000057.1| Brevibacterium mcbrellneri ATCC 49030 contig00064, whole genome shotgun sequence Length of sequence - 1353 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 388 244 ## RHA1_ro01743 Zn-containing alcohol dehydrogenase - Term 401 - 451 18.7 2 2 Op 1 . - CDS 499 - 1029 317 ## COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 3 2 Op 2 . - CDS 1179 - 1331 65 ## gi|295396295|ref|ZP_06806469.1| protein-(glutamine-N5) methyltransferase Predicted protein(s) >gi|294970854|gb|ADNU01000057.1| GENE 1 2 - 388 244 128 aa, chain + ## HITS:1 COG:no KEGG:RHA1_ro01743 NR:ns ## KEGG: RHA1_ro01743 # Name: not_defined # Def: Zn-containing alcohol dehydrogenase # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 1 126 176 300 302 90 48.0 2e-17 WRVTGLARTTDREFVTTTGADLVTEIEPRAYDAVADTAGLQATAIDAVVDGGAFVGVLPI APVAAQRGIEPTDVFVQADGVRLAELLRRGHAGDLAVRVAEEVPFSEFARAYALVGQGGL RGRVVLTF >gi|294970854|gb|ADNU01000057.1| GENE 2 499 - 1029 317 176 aa, chain - ## HITS:1 COG:BMEI1016_1 KEGG:ns NR:ns ## COG: BMEI1016_1 COG1951 # Protein_GI_number: 17987299 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain # Organism: Brucella melitensis # 24 172 129 273 356 175 61.0 3e-44 MSRRSRGPDGRTFLKVEPSALPLLAHGVFDAYTKLNLHYSHNAPVTFFEEKNTSCNLPAQ IELYADTIKGHENSYKFLFMAKGGGSANKSYLYQETKAILNPDKIIAFLEEKIRLLGTAD CPPYHLAIVGGTSAEFALKTAKYASAKFLDELPTTGNAKTGRGFRDLEMEEQGERR >gi|294970854|gb|ADNU01000057.1| GENE 3 1179 - 1331 65 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396295|ref|ZP_06806469.1| ## NR: gi|295396295|ref|ZP_06806469.1| protein-(glutamine-N5) methyltransferase [Brevibacterium mcbrellneri ATCC 49030] protein-(glutamine-N5) methyltransferase [Brevibacterium mcbrellneri ATCC 49030] # 1 50 8 57 57 81 98.0 2e-14 MLTEAGIDEPEATTFAVLDHIDGVLLHALAIRGREIDPARLEASLGALIG Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:02:53 2011 Seq name: gi|294970850|gb|ADNU01000058.1| Brevibacterium mcbrellneri ATCC 49030 contig00067, whole genome shotgun sequence Length of sequence - 2170 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 311 225 ## Ksed_06610 ParB-like nuclease 2 1 Op 2 . + CDS 350 - 1162 162 ## Asphe3_22410 hypothetical protein 3 1 Op 3 . + CDS 1081 - 2170 874 ## COG0739 Membrane proteins related to metalloendopeptidases Predicted protein(s) >gi|294970850|gb|ADNU01000058.1| GENE 1 3 - 311 225 102 aa, chain + ## HITS:1 COG:no KEGG:Ksed_06610 NR:ns ## KEGG: Ksed_06610 # Name: not_defined # Def: ParB-like nuclease # Organism: K.sedentarius # Pathway: not_defined # 5 102 239 336 336 72 45.0 5e-12 ARVRRTTSPDTDTAPDTDSSPGQVEIPAARWSMRSFVMNTEMLATWWDHYDPAELAAKLT DEQLEMFFTAAEATARFADELHAARTRHREGTASGRAHLRAI >gi|294970850|gb|ADNU01000058.1| GENE 2 350 - 1162 162 270 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_22410 NR:ns ## KEGG: Asphe3_22410 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 3 212 10 224 238 209 59.0 8e-53 MKTTAPEDPRTRARRIALIAGGLAALLLVATGLYGLILGPEPPEDTTSVPRPVVTSPADP SPTPGDLATIPASEDPEEFARTVVETLFAWDTASGFMPLDYSAIILDVGDPSGTEQAGLA SDVAAYLPSSEAWSDLRQYATHQHLSITTAYVPDAWDDALAQAQPGQLPEGATAITIEGT RHRAGVWNGEEVTSEHAVSFTIFRSAHPPTPTPPTPPARPRRRAREAVMWRGCPSWTTPC GEPVWSRSCSSSPSRSCCCPRCWAWSVSRC >gi|294970850|gb|ADNU01000058.1| GENE 3 1081 - 2170 874 363 aa, chain + ## HITS:1 COG:slr1708 KEGG:ns NR:ns ## COG: slr1708 COG0739 # Protein_GI_number: 16329833 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Synechocystis # 234 363 253 377 411 104 48.0 3e-22 MVKKLLIIALALVLLSPMLGLVGVAVLMNPATGATCTVNADGSVTIGEVPDELTVETADG QRVTLGREQLSHAATIIETGSGIDGVGRDGIQIALMAALTESSLRMLANSTVPGSEDHPN DGVGSDNDSLGLFQMRPSTGWGSVAELMDSQYQAQAFFGGPDGPNAGSPRGLLDIPGWED MDKGEAAQAVEVSAYPDRYQNYEPAAATILDTLTGTTTNPGEAVAVAAPATGGETSRVVF PLPEGTWVMTSPFGMRQHPITGEHKLHTGTDFSAPDGTAILAAADGTVTVAEYSGGYGGL IVIEHQVNGNTVATAYAHMWEHGIHVQTGDQVTAGQHIGDVGSSGNSTGPHLHFEVREGG TDG Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:03:02 2011 Seq name: gi|294970845|gb|ADNU01000059.1| Brevibacterium mcbrellneri ATCC 49030 contig00068, whole genome shotgun sequence Length of sequence - 3042 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 695 564 ## COG2217 Cation transport ATPase 2 2 Tu 1 . - CDS 1033 - 1620 641 ## Ksed_23430 hypothetical protein - Prom 1646 - 1705 2.7 3 3 Op 1 . - CDS 1772 - 2113 186 ## Mjls_4466 YHS domain-containing protein 4 3 Op 2 . - CDS 2163 - 3041 863 ## COG2217 Cation transport ATPase Predicted protein(s) >gi|294970845|gb|ADNU01000059.1| GENE 1 2 - 695 564 231 aa, chain - ## HITS:1 COG:Cgl2900 KEGG:ns NR:ns ## COG: Cgl2900 COG2217 # Protein_GI_number: 19554150 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 1 220 88 309 739 244 64.0 1e-64 MFAMLLGYSVPSWARWVAAVLGTVMYAWGGTPFLTGAVSELKSRKPGMMLLIALGITVAF LASWAATVGLVHHELEFWWELALLIVIMLLGHWIEMRSLAQTTSALDSLAALLPDEAERV EGDETVKVDPAELRVGDVVIVRPGGSVPADGTVIDGRADMDESMITGESRPVARGEGDAV TAGTVATDSGLRVEITATGDDTALAGINRLVAEAQGSSSRAQRIADKAAAL >gi|294970845|gb|ADNU01000059.1| GENE 2 1033 - 1620 641 195 aa, chain - ## HITS:1 COG:no KEGG:Ksed_23430 NR:ns ## KEGG: Ksed_23430 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 195 1 192 192 211 64.0 1e-53 MRKRLITTVATGVLGGALVLTGCSTGGDQDQATPSSTSQHEGHGSGGINDGGGMEHPMDG GPAPEGIEKASSPKYPPGTKVTLTADHMEGMDGANATIVGAFDTYTYAVNFTPTTGGDPI KDHKWVVQEEIKDAGDQRLADGTEVTLEAKHMEGMKGTHATIASSTDETVYMVDYESETM TNHKWVVESEIKPAS >gi|294970845|gb|ADNU01000059.1| GENE 3 1772 - 2113 186 113 aa, chain - ## HITS:1 COG:no KEGG:Mjls_4466 NR:ns ## KEGG: Mjls_4466 # Name: not_defined # Def: YHS domain-containing protein # Organism: Mycobacterium_JLS # Pathway: not_defined # 28 110 8 90 92 78 53.0 9e-14 MSNEDQAPTSCCSTSPAVEASVAEEAVSAGSSCCGTAGTENPAADSGHRENLLVEGSDGM TTCPVMVGNPVNKQDAEEKGLFRDYDGQRYWLCCPGCGPTFDSDLAKYAANMA >gi|294970845|gb|ADNU01000059.1| GENE 4 2163 - 3041 863 292 aa, chain - ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 12 288 487 752 755 278 67.0 9e-75 SPARTASSCSAWPGAVEDASEHPIAQAIAKGAVQEAGQLPTTVDFANVEGKGVRGVVDGH AVLVGRESLLADWSQLLSPDLAAAKAAAEAEGKTVVAVGWDGKARGILVVADAVKPTSAE AIQGLKDLGLTPVLLTGDNEAVARRIAAEVGIEKVIAEVLPKDKVDVVTGLQNEGKVVAM VGDGVNDAPALAQADLGLAMGTGSDVAIEASDITLVRGDLRAAIDAIRLSRKTLGTIKSN LFWAFAYNVAAIPIAALGMLNPMLAGAAMAFSSVFVVGNSLRLRGFRSVAKQ Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:03:10 2011 Seq name: gi|294970840|gb|ADNU01000060.1| Brevibacterium mcbrellneri ATCC 49030 contig00069, whole genome shotgun sequence Length of sequence - 2200 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 90 - 809 171 ## gi|295396306|ref|ZP_06806477.1| conserved hypothetical protein 2 2 Tu 1 . - CDS 608 - 901 180 ## 3 3 Tu 1 . - CDS 1344 - 1748 425 ## COG1733 Predicted transcriptional regulators - Prom 1794 - 1853 3.3 4 4 Tu 1 . + CDS 1852 - 2200 364 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases Predicted protein(s) >gi|294970840|gb|ADNU01000060.1| GENE 1 90 - 809 171 239 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396306|ref|ZP_06806477.1| ## NR: gi|295396306|ref|ZP_06806477.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 239 1 239 239 337 100.0 4e-91 MPFSTVLGISSDRPLEQRTTPQWGGVGRVAGVARQAALAASDDLVTGLDIDAAQVTYHGA AVVAVIDDDLVAVAIAVPPRGADDAGAGGQQARTEVDGVLVVGAERRVGGVAAPARVAGE RALGDRVGGAVGERQEELAGEGILVVLLRLGRRGGLRRPGRLGWRIGAGGDTLQRAVRAG VDPPVGDVATARDAIPQVRAPQRPSTQSPCTWHSMATRSPGRSQLTRVPVRGSEFMARE >gi|294970840|gb|ADNU01000060.1| GENE 2 608 - 901 180 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGFAKFILTATAAAAGGTVTARPSAVATVSYSLAMNSEPRTGTRVSWLRPGERVAIECQ VQGDWVDGRWGARTCGIASRAVATSPTGGSTPARTAR >gi|294970840|gb|ADNU01000060.1| GENE 3 1344 - 1748 425 134 aa, chain - ## HITS:1 COG:AGc1731 KEGG:ns NR:ns ## COG: AGc1731 COG1733 # Protein_GI_number: 15888287 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 133 73 187 190 105 47.0 2e-23 MATTSASQRAEQSRREFDAFMAGCASRQLLDRIADKWVTLVLAALGESEDGLRYSELSRR LAGVSQKMLTQTLRALERDGLVAREVTASVPVRVDYQLTALGRSLLVPVMQLKAWAEAHM TEVLAAREAYDARG >gi|294970840|gb|ADNU01000060.1| GENE 4 1852 - 2200 364 116 aa, chain + ## HITS:1 COG:mlr2819 KEGG:ns NR:ns ## COG: mlr2819 COG0604 # Protein_GI_number: 13472500 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mesorhizobium loti # 1 116 1 115 308 59 40.0 1e-09 MRALIGRAGSPLPVLVDVPDPHPGPGEVVIATTAATVNPIDVRIADGEVREAFGLTGDVG LGWDFSGIVKAVSDDVTGVSVGQRVAALTGNPADPLRAHAELVTVPAGSVAPIPEG Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:03:31 2011 Seq name: gi|294970838|gb|ADNU01000061.1| Brevibacterium mcbrellneri ATCC 49030 contig00070, whole genome shotgun sequence Length of sequence - 569 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 507 284 ## Asphe3_22460 hypothetical protein Predicted protein(s) >gi|294970838|gb|ADNU01000061.1| GENE 1 3 - 507 284 168 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_22460 NR:ns ## KEGG: Asphe3_22460 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 168 1 170 489 245 75.0 4e-64 MSATNEKTSTELEPVKFSRLTRRGVLLGLSVSQLIALGIGTASLVTAFYAGGGIRVLVSA PIWVLAAAVTWSPLGGRPIVEWLPIAFWWLWRSTGGQLLYRRRIVTPRPAGTLALPGDMA RLREYSDPETGACMIHDPAQATLTVLCTVTHPAFILLDPAEQERRVSA Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:03:35 2011 Seq name: gi|294970835|gb|ADNU01000062.1| Brevibacterium mcbrellneri ATCC 49030 contig00071, whole genome shotgun sequence Length of sequence - 794 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 513 442 ## Asphe3_22400 ParB-like nuclease 2 1 Op 2 . - CDS 510 - 788 247 ## Mlut_00250 hypothetical protein Predicted protein(s) >gi|294970835|gb|ADNU01000062.1| GENE 1 3 - 513 442 170 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_22400 NR:ns ## KEGG: Asphe3_22400 # Name: not_defined # Def: ParB-like nuclease # Organism: A.phenanthrenivorans # Pathway: not_defined # 6 167 7 221 333 176 53.0 3e-43 MSTHSGEIVLDRAVESIIVGHRHRHDLGDLDALADSIARKGLLQPPTITPDGVLVCGARR LAAIKQLGWRTVGVWVRSNVSTRLEHRLAEQDDNELHKDLDPREAAAMIPGGASFMTLEK IGYLEKVAADPDQPEQVRQDAAAALVQIEAGAPVHPAYTRIRAATSTPAA >gi|294970835|gb|ADNU01000062.1| GENE 2 510 - 788 247 92 aa, chain - ## HITS:1 COG:no KEGG:Mlut_00250 NR:ns ## KEGG: Mlut_00250 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 88 200 287 299 129 70.0 4e-29 MCQALAQAGSRQTAYEALRRDRHARALLDLPKKSWSALLKVLLGNPNPAYAATGLGKGIL VRLLIGETVPVLLRDDDLVLTIALSAPGGASA Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:03:42 2011 Seq name: gi|294970830|gb|ADNU01000063.1| Brevibacterium mcbrellneri ATCC 49030 contig00096, whole genome shotgun sequence Length of sequence - 1704 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 47 - 340 80 ## Mlut_16100 hypothetical protein 2 2 Op 1 . - CDS 411 - 650 104 ## PPA0849 transfer protein homolog TraA 3 2 Op 2 . - CDS 619 - 1212 421 ## Mlut_00370 conjugative relaxase domain protein, TrwC/TraI family 4 2 Op 3 . - CDS 1225 - 1695 265 ## Ksed_06440 TrwC relaxase Predicted protein(s) >gi|294970830|gb|ADNU01000063.1| GENE 1 47 - 340 80 97 aa, chain + ## HITS:1 COG:no KEGG:Mlut_16100 NR:ns ## KEGG: Mlut_16100 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 96 140 233 237 129 69.0 5e-29 MMGNVWEWCWDYSDPARYADYRVLRGGGWADKHWSVRASVRRGSMPGAQLDDVGFRVAQG AAGEAACHAGQGWSQKADRDRADVDGPVPVGWTPLRT >gi|294970830|gb|ADNU01000063.1| GENE 2 411 - 650 104 79 aa, chain - ## HITS:1 COG:no KEGG:PPA0849 NR:ns ## KEGG: PPA0849 # Name: not_defined # Def: transfer protein homolog TraA # Organism: P.acnes # Pathway: not_defined # 1 75 65 139 563 100 78.0 2e-20 MFSSDTLLSAEDRLLTRARATTGPSIDLATVETITSKPDAEGWVLGLDQAAALASVAVSG RVVDVLVGPAGAGNTTCRV >gi|294970830|gb|ADNU01000063.1| GENE 3 619 - 1212 421 197 aa, chain - ## HITS:1 COG:no KEGG:Mlut_00370 NR:ns ## KEGG: Mlut_00370 # Name: not_defined # Def: conjugative relaxase domain protein, TrwC/TraI family # Organism: M.luteus # Pathway: not_defined # 1 186 275 478 1174 254 68.0 1e-66 MGRDRNSSWAITDVPEQLVAEYVATYGRQPSDATVIRLRAQATLATCPEKQVRSLAELTE QWRTRASRVLGSDATVWARAVTGGERQLLLRADDVPLDLIGQVGRSVVEVVGEKRSTWRR WNLMAEAARQTMGWRFASVEDREAITAMVADVAEQASLRLTPPELATSPVEFRRLDGTSV FRPNHSDRVLLRHPALG >gi|294970830|gb|ADNU01000063.1| GENE 4 1225 - 1695 265 156 aa, chain - ## HITS:1 COG:no KEGG:Ksed_06440 NR:ns ## KEGG: Ksed_06440 # Name: not_defined # Def: TrwC relaxase # Organism: K.sedentarius # Pathway: not_defined # 2 155 123 276 1184 243 87.0 2e-63 MVAQIEAEEAARGSRRAVAGFDFTFSVPKSASVLWAVADAGTQALIAQAHHEAVAVVVAF MEREVAAACTGATAGDGAVAQVDVTGLIATAFDQWDSRAGDPHLHTHVAISNKVRTVLDG KWWSLDGRPMHAAVVALSELHEAVFADHMTRTFGVS Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:03:58 2011 Seq name: gi|294970815|gb|ADNU01000064.1| Brevibacterium mcbrellneri ATCC 49030 contig00097, whole genome shotgun sequence Length of sequence - 12925 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 7, operones - 3 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 60 - 491 192 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 2 2 Tu 1 . - CDS 753 - 1184 256 ## 3 3 Op 1 . - CDS 2040 - 2687 344 ## COG2910 Putative NADH-flavin reductase 4 3 Op 2 . - CDS 2684 - 3916 903 ## COG0477 Permeases of the major facilitator superfamily 5 4 Tu 1 . + CDS 4011 - 4613 641 ## COG1309 Transcriptional regulator - Term 4539 - 4563 -1.0 6 5 Op 1 . - CDS 4676 - 5119 408 ## COG5485 Predicted ester cyclase 7 5 Op 2 . - CDS 5116 - 5832 357 ## COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis 8 5 Op 3 . - CDS 5838 - 6548 593 ## SCP1.233A putative ATP/GTP-binding protein, mmyx 9 5 Op 4 . - CDS 6545 - 7579 818 ## SCP1.233 hypothetical protein 10 5 Op 5 . - CDS 7569 - 7838 360 ## gi|295396329|ref|ZP_06806496.1| conserved hypothetical protein 11 5 Op 6 3/0.333 - CDS 7832 - 8578 197 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 12 5 Op 7 . - CDS 8575 - 9918 1047 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 13 6 Op 1 . + CDS 10196 - 10948 230 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase 14 6 Op 2 . + CDS 11038 - 11934 195 ## COG2207 AraC-type DNA-binding domain-containing proteins 15 7 Tu 1 . + CDS 12306 - 12924 382 ## Mlut_00280 hypothetical protein Predicted protein(s) >gi|294970815|gb|ADNU01000064.1| GENE 1 60 - 491 192 143 aa, chain - ## HITS:1 COG:mll5195 KEGG:ns NR:ns ## COG: mll5195 COG4977 # Protein_GI_number: 13474332 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Mesorhizobium loti # 1 126 138 263 325 103 44.0 9e-23 MLAATGRLDGKLATTHWSTAQQLDDEHPKIIVDADPILIRDGDVWTGAGFSSCLDPALAL VADDFGEALAQKVVRQLVVCLKRLSGQSQFSVPLGSASTTRQVDELRHYIREHLAEPPTV AELTEQLHVRTGNSPESSRPSWA >gi|294970815|gb|ADNU01000064.1| GENE 2 753 - 1184 256 143 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHARFGDKKQLARLLLDYERTAWSAWEKTIRGRSLTGVSAVRKLLLLAANHYATDQRLQG AARLAVESHYIDPRRQHPYKRQLQVLHRTVGRNPSGLPDGTTADGFIATVLATFAGLTTA VNGQWTDLPERIRQFLDLLKTAT >gi|294970815|gb|ADNU01000064.1| GENE 3 2040 - 2687 344 215 aa, chain - ## HITS:1 COG:AGc3633 KEGG:ns NR:ns ## COG: AGc3633 COG2910 # Protein_GI_number: 15889289 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 203 1 189 203 60 27.0 3e-09 MTDVLLLGATGRTGGFLLNHRPAGIRLYAGVRPGDSTQPLPVPAHADDSRAIDLDDPTRM REALTGIDIVVNAIRLREQIPARALIDLHDRIVDAQDESKLPLIVHVGGAGALHTGNGRR FWQDPAFPTVTLPRGIAHAALRDHLESETTPHRWAYLIPPPSYQPGGQFTGTYRRRQPAV DERTFLQSSISYEDFALALADAIRDRWTGTHLISA >gi|294970815|gb|ADNU01000064.1| GENE 4 2684 - 3916 903 410 aa, chain - ## HITS:1 COG:CAC3506 KEGG:ns NR:ns ## COG: CAC3506 COG0477 # Protein_GI_number: 15896743 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 30 396 15 381 392 144 28.0 4e-34 MPSNLPHPEATAPERPPSRGSASPDFPAGRVAVVILVVTALFVLTQLYAAIPLLNPVAAD LGADATFALSTSFSLTYAVGFLIWGPISDRYGRKRVMAVAIGVLAVATLLCATASSVPAM AALRALQGLSAAGFAPVALAYLTEAVAPSRRAGAIGAMSTAFLVAGIFGQVVASTVALKA GWSWFFVLCGVVLAITFVLILTLVTEAPKHAPSISLFKQFGNLARLLVTPAIVLLSIAHV TLLLSFVALYTGIGQHLESLDVPASDIILIRLAALPAMFVSLGVGALAKRFGIVRVAQTG FTLAAVGMLGEVVLSGTLPGLIAASIVYVAGVALAVPSMINLYGETAAPSRGSGMAINGF ILFIGASIGPIVGGAITNLSTLAIVLVALLVIAAVSIRCVSMLNRKATRS >gi|294970815|gb|ADNU01000064.1| GENE 5 4011 - 4613 641 200 aa, chain + ## HITS:1 COG:RSc1007 KEGG:ns NR:ns ## COG: RSc1007 COG1309 # Protein_GI_number: 17545726 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 7 158 36 195 239 65 31.0 7e-11 MQTVAWDTEGTKRKIKDAATVEFADRGPDGTTIEQIAKKAGVNKERVYNYFGGKKELFAA VLRDELAQVAQSVPVASFAREDVGDYAGRVYDYHRERPELIRLLRWEALAFDGEVPDEAQ RREYYGYKSAAVVGGQEAGTITRDIDATHLILFVLSIAGWWSTVPQVARMLCGPPSEEEH RVRRAAVVTAARRLACADTA >gi|294970815|gb|ADNU01000064.1| GENE 6 4676 - 5119 408 147 aa, chain - ## HITS:1 COG:all4540 KEGG:ns NR:ns ## COG: all4540 COG5485 # Protein_GI_number: 17232032 # Func_class: R General function prediction only # Function: Predicted ester cyclase # Organism: Nostoc sp. PCC 7120 # 45 135 43 133 137 69 41.0 2e-12 MTDTDLLTRRKERAAILFEEIITNNRLELADEVFAPNFYWPQFDLRGPDGVREWVRAFRT AFPDMDDRVQEQTAEGDVVVTRVRCVGTQTGPFRGLPPSGNRADFTAIGIDRFEGDHIVE RAAYFDLADLMRQLGHTDLHVPEVDRP >gi|294970815|gb|ADNU01000064.1| GENE 7 5116 - 5832 357 238 aa, chain - ## HITS:1 COG:CAC1022 KEGG:ns NR:ns ## COG: CAC1022 COG3208 # Protein_GI_number: 15894309 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted thioesterase involved in non-ribosomal peptide biosynthesis # Organism: Clostridium acetobutylicum # 1 213 22 235 253 93 31.0 4e-19 MQLFALAYAGGTASTAYAKLQADLPPLAEVVPLDLPGRGRNTARRPGSVDDLIDHLWETI ADRAQPDWGLLGHSYGAGLAFELAKRAEEKGQPPQVCFLSGRRAPSGRAHPSRQSLTDEE LLKQVAEWGALPREFQTHPALREMAAARLREDVAFSDELHARSPEPLDQTVLHTLAGNDD PVAPPEAVHSWRRFTHAPSTAQTFDGEHFFLFTNPDVQIAIGDRLGRLASTLIPKGTP >gi|294970815|gb|ADNU01000064.1| GENE 8 5838 - 6548 593 236 aa, chain - ## HITS:1 COG:no KEGG:SCP1.233A NR:ns ## KEGG: SCP1.233A # Name: mmyX # Def: putative ATP/GTP-binding protein, mmyx # Organism: S.coelicolor # Pathway: not_defined # 1 231 1 232 234 214 47.0 4e-54 MRISISGTYSTGKTSTTMCLSHYTGIPRTLAKAIREIMPDAVPGKRLSEVTPAEFLQLMM RRHCGRAVAEATLGDPYLSDGSSLQEWAYGLARTRFGMNPTDPDRPNQVDWPDMGFFHEV VDQYEHAFKQHVKASYDIMIHLENERPISDDGHRPMNEDFRSYCDEILWNAASDLDIPLY RVSGTLESRVQTIVSLLDLPTVIDLDEAIARMQQEYAAIDQRLETERQQAAQRVAG >gi|294970815|gb|ADNU01000064.1| GENE 9 6545 - 7579 818 344 aa, chain - ## HITS:1 COG:no KEGG:SCP1.233 NR:ns ## KEGG: SCP1.233 # Name: mmyD # Def: hypothetical protein # Organism: S.coelicolor # Pathway: not_defined # 21 336 15 338 339 153 35.0 9e-36 MTTELRAATPTHPGGVIELASIDDYLGPARQRFFGSGHRRSTYRIHPLDADTDADLAAAV DVAYPTDWSRKKADSDLRPHLSTVDVMILGVRSAEALLTGLVGLTPDEVQAAMIRKLTVR AGTRPEESLNGLPLRATLKKSTPGPDGEDGEVDSTIIVQVGVMQTRVVLRHPAPSAPAAG VIDYTLLDEDPTRHWGSGYRGDEQSIRAVTADTESLVAHASIGLHHSGACGTRASHAPGP ATFIDAFVSLLQLGQLLMYELDQIDRAHSDTLWMQQLILRPNTASTSRETTAAETGAELR IADHQLLDLSTGTWRNLDFRGESGGITMSATFAHRIRHLEGNTR >gi|294970815|gb|ADNU01000064.1| GENE 10 7569 - 7838 360 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396329|ref|ZP_06806496.1| ## NR: gi|295396329|ref|ZP_06806496.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 89 1 89 89 105 100.0 1e-21 MLTVSRVTTDIMTTITDILGDGLDDDIEITEDSALTDIGLNSLMLARVIVSLEQDFERDP FSDGSHAIVDIHTVGDLIAAYTEVKPHDD >gi|294970815|gb|ADNU01000064.1| GENE 11 7832 - 8578 197 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 14 244 7 238 242 80 26 6e-15 MSATSPAQTHRHAVITGASGKLGAALAQRLLDRDWHVDLWSRNTSARTDQLLAEYPERAR WHEVDLTDPGTIKQALRARPPGTRLELLVNNAGLLHQNLFVTEPDEITATTVDVNLLGLL HATKACARLMLGNGGGNIINISSINAIRGNRGVATYSAAKAGIEGLTASLARELGPEQIR VNTLMPGYFASDLSANVTDRNLDRITRRTPLGRLGTVDDVLPAFDFLTNPSTTFVTAQTI VIDGGLTC >gi|294970815|gb|ADNU01000064.1| GENE 12 8575 - 9918 1047 447 aa, chain - ## HITS:1 COG:VNG1339C KEGG:ns NR:ns ## COG: VNG1339C COG0318 # Protein_GI_number: 15790370 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Halobacterium sp. NRC-1 # 1 432 4 499 521 123 27.0 7e-28 MSSKLQTALATLGEEPAIVSGARVTTYGSLNRERRIWTERLSEAGVRPGDVVALEADYSV ASVAALIALLEIKAITVPISSLPEEKREEILAVSAARFLITLTDSRPVVSPLEVADGQPS DLYRTLRYRGAAGLVLFSSGTTGNSKGSVLDFDKLVNAYEHSNSKPHRTITFLGFDHIGG VNTLFHALAHGSTIVTVRDRTPDEVLAVVQDARVEVLPTTPTFLTMCLIGRKLGQYDLSS LKVITYGTEPMPEHTLRKLNEALPGVRLKQTYGLSELGIMSTKSKSNDSLWVKLGGAGFE HKIVDGTLWVKSDRAMLGYLNAPYFFDEDGFFNTQDQVEVDGDYVKILGRKSEIINVGGL KVYPSEVESALLEVEGVADVLVSGHPNAVTGEIVRARIKPAPGTNSQQLKHDVRRHCAAK LEDYKVPAIVDFSTDDLHSKRFKKARA >gi|294970815|gb|ADNU01000064.1| GENE 13 10196 - 10948 230 250 aa, chain + ## HITS:1 COG:ML1547 KEGG:ns NR:ns ## COG: ML1547 COG2977 # Protein_GI_number: 15827814 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Mycobacterium leprae # 35 186 34 183 227 89 35.0 7e-18 MPFSGAAIGQQIDRQCPVGLVTEGANIADQSAALFPDEAAAVRRSPRSRQAEFSTARACA RRALARLGGPQVSLPVGRHRAPEWPQDYVGSLSHCADVAVALVAEAARFAGAGIDIEAIS AVPESLVERIATADERIMLTQLDRDESSIPWGLLLFSAKESAYKCCFQTTGHRISFRDIS IRVNADGSLHAWPAGARSASRNGLTSGAEGLWTVVGTHVVTAVWQQTDSNDEVDGIRSQA ALSPCCCEGI >gi|294970815|gb|ADNU01000064.1| GENE 14 11038 - 11934 195 298 aa, chain + ## HITS:1 COG:SMc02888 KEGG:ns NR:ns ## COG: SMc02888 COG2207 # Protein_GI_number: 15963966 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Sinorhizobium meliloti # 176 284 212 316 340 62 37.0 1e-09 MGRFSAVVARTETTLLPTEARAFDYVRFIFIRAGTAVLCSEFGERSVRAGDVVILAPNTL CGSHPEGSLTTTTIYAELDYLVDQTFWQHADALMDRYHAWEFISCRFPDSAHIVRIGSSR LDFVLPWLDQLVELSLDGATPEHFFRVQACFASILDALAPFFDAQGTRPCNLHGHSPTLS PYSRHFRPVRIEALHMRRVLETDMTRRWTIAQLAAEVHLSPSQAHRIFVQAYGQTPLGYQ SMVRALEMARLLRRTNLPVQKIAGRVGWNDRSHAARVFRRLIGVSLTRYRQFLDDIRP >gi|294970815|gb|ADNU01000064.1| GENE 15 12306 - 12924 382 206 aa, chain + ## HITS:1 COG:no KEGG:Mlut_00280 NR:ns ## KEGG: Mlut_00280 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 195 2 196 314 216 61.0 7e-55 MAEHGTVSAVLVQLDESWSLLTTARELAQSGVPVFPCVPYEKRPLTPRGFHDASADPEQV EMWWRHTPLASIGIPTGQPSGMVAVDVDQHGRVDGYQAIRRARQAGLVAGWEMLVRTPTG GMHAYYPAAPGLEQRSWQAARAGVDFRGDGGYVIVPPSLRSISGATVSYRVESVIPGPAS PIDSDALRNFLDPRPAPRLVANPGLR Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:04:39 2011 Seq name: gi|294970775|gb|ADNU01000065.1| Brevibacterium mcbrellneri ATCC 49030 contig00098, whole genome shotgun sequence Length of sequence - 36222 bp Number of predicted genes - 39, with homology - 37 Number of transcription units - 18, operones - 10 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 296 - 1702 1002 ## COG0477 Permeases of the major facilitator superfamily 2 1 Op 2 . - CDS 1690 - 2961 573 ## PLES_45301 hypothetical protein - Prom 3059 - 3118 3.6 + Prom 2993 - 3052 2.8 3 2 Tu 1 . + CDS 3112 - 3987 344 ## COG0583 Transcriptional regulator 4 3 Op 1 . - CDS 4098 - 4262 94 ## 5 3 Op 2 . - CDS 4346 - 4567 108 ## Xcel_3170 hypothetical protein 6 3 Op 3 . - CDS 4599 - 4688 69 ## - Prom 4724 - 4783 3.3 7 4 Op 1 . - CDS 5051 - 5242 246 ## gi|295396341|ref|ZP_06806507.1| ArsR family transcriptional regulator 8 4 Op 2 . - CDS 5304 - 6563 1214 ## COG0477 Permeases of the major facilitator superfamily 9 5 Tu 1 . - CDS 6703 - 6861 185 ## gi|295396343|ref|ZP_06806509.1| thioredoxin-disulfide reductase + Prom 7190 - 7249 2.7 10 6 Op 1 . + CDS 7273 - 7851 489 ## Xcel_2875 hypothetical protein 11 6 Op 2 . + CDS 7746 - 8576 592 ## Xcel_2876 hypothetical protein + Prom 8741 - 8800 2.5 12 7 Op 1 . + CDS 8897 - 10006 485 ## PSPTO_0200 hypothetical protein 13 7 Op 2 1/0.500 + CDS 10003 - 11202 574 ## COG0477 Permeases of the major facilitator superfamily 14 7 Op 3 . + CDS 11199 - 12374 608 ## COG0439 Biotin carboxylase 15 7 Op 4 . + CDS 12423 - 13412 704 ## COG0582 Integrase - Term 13342 - 13407 5.4 16 8 Op 1 . - CDS 13419 - 14084 623 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 17 8 Op 2 . - CDS 14178 - 15176 441 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 15270 - 15329 2.3 + Prom 15287 - 15346 2.0 18 9 Op 1 38/0.000 + CDS 15558 - 16499 1231 ## PROTEIN SUPPORTED gi|62422957|ref|ZP_00378132.1| COG0052: Ribosomal protein S2 19 9 Op 2 . + CDS 16554 - 17381 463 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 17398 - 17447 18.6 20 10 Op 1 . + CDS 17596 - 18228 667 ## COG0450 Peroxiredoxin 21 10 Op 2 33/0.000 + CDS 18312 - 19064 639 ## COG0528 Uridylate kinase 22 10 Op 3 7/0.000 + CDS 19140 - 19697 778 ## COG0233 Ribosome recycling factor 23 10 Op 4 2/0.250 + CDS 19687 - 20655 943 ## COG0575 CDP-diglyceride synthetase 24 10 Op 5 . + CDS 20715 - 22040 994 ## COG0820 Predicted Fe-S-cluster redox enzyme 25 10 Op 6 . + CDS 22071 - 22607 576 ## Achl_1389 hypothetical protein 26 10 Op 7 . + CDS 22660 - 23217 388 ## gi|295396361|ref|ZP_06806527.1| possible acyl-coenzyme A synthetases/AMP-(fatty) acid ligase - Term 23239 - 23294 15.1 27 11 Tu 1 . - CDS 23319 - 24512 1348 ## COG1960 Acyl-CoA dehydrogenases - Prom 24680 - 24739 1.6 + Prom 24484 - 24543 1.7 28 12 Op 1 17/0.000 + CDS 24666 - 25865 905 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 29 12 Op 2 6/0.000 + CDS 25850 - 27373 1544 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 30 12 Op 3 2/0.250 + CDS 27469 - 28614 1161 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 31 12 Op 4 . + CDS 28653 - 29444 394 ## COG3393 Predicted acetyltransferase 32 12 Op 5 . + CDS 29625 - 30617 1273 ## RSal33209_3437 transporter + Term 30648 - 30700 10.1 33 13 Tu 1 . - CDS 30641 - 31045 461 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) + Prom 31013 - 31072 2.5 34 14 Op 1 . + CDS 31118 - 32947 1989 ## COG0442 Prolyl-tRNA synthetase 35 14 Op 2 . + CDS 32950 - 33780 858 ## COG0730 Predicted permeases + Term 33823 - 33854 1.7 36 15 Tu 1 . - CDS 33786 - 34244 100 ## gi|295396371|ref|ZP_06806537.1| hypothetical protein HMPREF0183_2035 - Prom 34438 - 34497 2.2 + Prom 34365 - 34424 1.7 37 16 Tu 1 . + CDS 34562 - 34924 275 ## Cpin_1311 glyoxalase/bleomycin resistance protein/dioxygenase + Term 34976 - 35022 17.5 - Term 34769 - 34807 0.7 38 17 Tu 1 . - CDS 34927 - 35706 114 ## Franean1_1660 oxidoreductase domain-containing protein - Term 35754 - 35794 3.2 39 18 Tu 1 . - CDS 36022 - 36177 109 ## gi|295396374|ref|ZP_06806540.1| conserved hypothetical protein Predicted protein(s) >gi|294970775|gb|ADNU01000065.1| GENE 1 296 - 1702 1002 468 aa, chain - ## HITS:1 COG:AF2258 KEGG:ns NR:ns ## COG: AF2258 COG0477 # Protein_GI_number: 11499839 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Archaeoglobus fulgidus # 21 426 19 417 503 118 26.0 3e-26 MSPLNKRNRVPFQKLTVATCAMGTLTVNINNTGLNLVLPRIRDDLGLDLATMQWVSAAYV LILAALTMLGGALGDRYDKRTVLVTGILIYTFGSTVGMLADSGIWLTLSRMCAATGASVL VPVGLAALRVIAQTPEQLASYMSLWGLSVGLGMALGPVAGGIVTDLLGWRAFFTVMACLG ALYLCAVLICFPELPGTKERHVDVVSHILLGSSMLALTAFFIELRSDAPAWVKVALGCAV PVCATAWQWRDRKLAHPVIPPRAFHDRSFSVSMLIAFVNYLGLGATLFVAAFVLQDLFGL TAGVAGAVSVPLAIATAVGASWSGQAKGAKQIRGAIRTAAFATLCGVLIAGGAVTLVTSA QLWVAVIVFVAGSCGMGFGFGAANTPVNYLAMASLPKTISGVAGSSASASRQLGQSTGVA TGGLLLGIGVALAGVGSPLAYLLPGVEVAFIAILLAMLPAFYRSRSGN >gi|294970775|gb|ADNU01000065.1| GENE 2 1690 - 2961 573 423 aa, chain - ## HITS:1 COG:no KEGG:PLES_45301 NR:ns ## KEGG: PLES_45301 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 4 383 8 389 431 391 52.0 1e-107 MDRMILGSAVTGAKFTPRNHQPSRDPVIDAAASGMTIKHRLTDVTDEAKRLADLGCRYWH YHARNPKTNEQTTSNSIYQSVSNSVQEYDDAVVISFGASRNGPEVKEAIRHLGEWERVSQ AALPLHMEGAHFVTTQAAVELQVIIDLERQHGPLNRDFACSAEFSELAKSYVPTQKEVDA SLVAFSTANGANYGSTSPATQLAVLSRGISERNRLYLPHEIEWVQLERSYLATRFCIERP DIALGSSGQLNITLLFGFSPTLPFPHTYAEFLDAVNLAKSLEYDHKGYKCRHVTVSVGAA VIPQHASRHCVPMDIGVDKGRVLGPLQRIVHYACQPDAQVDIIRSGMEDTPYHYDVATGL ALAGNVQLLIDVTTEMRKYGYEAVTEKNDVNRGLHFDVLKDRNTADMDSLSKTIEQLDQP CLL >gi|294970775|gb|ADNU01000065.1| GENE 3 3112 - 3987 344 291 aa, chain + ## HITS:1 COG:mlr6981 KEGG:ns NR:ns ## COG: mlr6981 COG0583 # Protein_GI_number: 13475811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 2 281 6 292 299 132 34.0 1e-30 MELHQLRAFTQVVEDGSFREAAETLHLTQAAISHSIKSLEGRVGVTLLNRGRTGVSLTEA GEVLLPYAKRVVETIDAASEDLASLHGAGTLKLATFASASNHYLPAVLQEFHSRFPRIRL DIKEGNDLDTLEWLRTGEVDVAFVVGHPHNVQFQPLYDDDFVLVARRDQMPGVAENAVPI EMMADQRVIAATGGCEKVVSAALSVANTSVVYSAVVREPSTALALVQAGVGITILPRLLV PTLPRTLVCLDIIPRISRQISIAVRRGERRSHAVASFMGLVGQMRGIHGQE >gi|294970775|gb|ADNU01000065.1| GENE 4 4098 - 4262 94 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSAPTTDRASFTVTPALLATESKPAPLAVGNAANTRNSGSSKSSVILNSACRMF >gi|294970775|gb|ADNU01000065.1| GENE 5 4346 - 4567 108 73 aa, chain - ## HITS:1 COG:no KEGG:Xcel_3170 NR:ns ## KEGG: Xcel_3170 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 1 73 113 185 185 99 68.0 4e-20 MPVEGADLSIGLYSPERCIADAFRLRGQLGYEIARDSLREWLRRGGKPNSLIQIALQLPR AKTPITRALETLS >gi|294970775|gb|ADNU01000065.1| GENE 6 4599 - 4688 69 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPPITLSTADRVGPSRAGLYRAGDHLAPV >gi|294970775|gb|ADNU01000065.1| GENE 7 5051 - 5242 246 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396341|ref|ZP_06806507.1| ## NR: gi|295396341|ref|ZP_06806507.1| ArsR family transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] ArsR family transcriptional regulator [Brevibacterium mcbrellneri ATCC 49030] # 1 63 6 68 68 115 100.0 1e-24 MSGLSKADVFDVFAEVVLYCRGELCRISREAAVWLRERGIDAKAMDEGIIEWRANKDIIF NVA >gi|294970775|gb|ADNU01000065.1| GENE 8 5304 - 6563 1214 419 aa, chain - ## HITS:1 COG:BS_yddS KEGG:ns NR:ns ## COG: BS_yddS COG0477 # Protein_GI_number: 16077576 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 12 413 24 427 436 383 59.0 1e-106 MNTDSKLHASISEHERARVHKRTLTVVILSQILGGAGLAAGLAVGALLAQDMLGADALSG LPTGLFTLGSALAAYLVGRSTQRFGRRMGLACGFIAGGIGALGVVIAAIADNAPLLFVAL FIYGSGTATNLQSRYAGTDLALPSRRGFGASMAMVATTIGAVAGPNLIEPMGVFADAIGV PTLAGPFILAAVAYTAAGLFLFAFLRPDPYLLARDIAEHETAQAAQSDQATTIPKVGVSA YVGATVMVLTQIVMIAIMTMTPVHMRAHDHGMDAIGLVIGLHIGAMWLPSLFTGTLVDKL GRTPMVIASGVTLLLAGLLAAFAPADSLGLLILALVLLGLGWNFGLVAGTALVVDATVPQ NRPKTQGTIDVLIALVGAGGGVASGAVMHATSYQVLSIGGGTLVTLLIPVLFWARNEQR >gi|294970775|gb|ADNU01000065.1| GENE 9 6703 - 6861 185 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396343|ref|ZP_06806509.1| ## NR: gi|295396343|ref|ZP_06806509.1| thioredoxin-disulfide reductase [Brevibacterium mcbrellneri ATCC 49030] thioredoxin-disulfide reductase [Brevibacterium mcbrellneri ATCC 49030] # 1 52 1 52 52 73 100.0 4e-12 MQQCAFNNKKFEFIWSSEVIKIGGAIQIIGGCRSRINELADLTFASDKTLVF >gi|294970775|gb|ADNU01000065.1| GENE 10 7273 - 7851 489 192 aa, chain + ## HITS:1 COG:no KEGG:Xcel_2875 NR:ns ## KEGG: Xcel_2875 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 9 192 3 184 184 200 57.0 3e-50 MTTINLTPVFTLEQARAAGLRKDEIYDLLAAEEIERVGRGVYLYPGMLDERFVSLAAATA LRSEATMCLTSALANHDLTDVIPFDTDIALPRGTRHPAGFDHVTWHSFATDTFTLGRETH RVAPGVTLAIYSPERTIIDCFRLMHHLGGEIAYEALRRWLRRTGSTPGRLLRMADAFPKA KPRLRLALEVLL >gi|294970775|gb|ADNU01000065.1| GENE 11 7746 - 8576 592 276 aa, chain + ## HITS:1 COG:no KEGG:Xcel_2876 NR:ns ## KEGG: Xcel_2876 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 35 276 1 239 287 268 60.0 2e-70 MAASHRVNAGEVAAHGRCLPQGEAAAAPGVGGAAVTPAPNRNTRAGQVYNDLRNIARAHR RDPAEYFTLYALEGFLVRLVASKVSNDFVLKGGVLMTAFAVRRPTRDIDLAATGFPNDIL DVEARVREIIVQQPDDGLVFELGSVSGESILDDAVYTGVRVKLNVRLATARIALHVDVNF GDPIWPAPVEQELPCLLGGTLRLRGYPDHMVFAEKIVTALDRGEVNTRWRDFVDIAWIVG TRRTRAGPQSNGHDLGSAVAVLGKPPVALLQADLSG >gi|294970775|gb|ADNU01000065.1| GENE 12 8897 - 10006 485 369 aa, chain + ## HITS:1 COG:no KEGG:PSPTO_0200 NR:ns ## KEGG: PSPTO_0200 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae # Pathway: not_defined # 1 366 9 400 405 159 29.0 2e-37 MTLGVNRMAEQAQKFGYQLRLLASDPSIYSDTEGADVLTFPTNDHAQLRAYIRAERSNIG AVFSSTDTWGVIAAELREEFDFPRRFSSSRLKNFRDKEWVQRELSAYSATPVSDFPKIVK PRNGTGSLGIDLVHTERELEELRASAGDQDAFVTEPYYRGPLYSAEFWSNGNSTVFFGIT NRILTAPPVFLENVKTFPHEHGTPWEAEVEKWGKSLLAKLQYDVGFAHVEFIETANGFAL VELNARMPGALITPAIDTCTNFDPYALAVADALNMEPHLPEIREVCAGHSHVSIYSTQTG QLRGIDGLDNLRFYPGQPGWIPSKSIGDHITDTTSYKARIGNVYATAATPALAQDRALAA SQALTVDVQ >gi|294970775|gb|ADNU01000065.1| GENE 13 10003 - 11202 574 399 aa, chain + ## HITS:1 COG:DR1307 KEGG:ns NR:ns ## COG: DR1307 COG0477 # Protein_GI_number: 15806325 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Deinococcus radiodurans # 36 382 80 431 458 70 27.0 5e-12 MMPDPSKNGSKESVDVATSSTWVFLVAIVISGITTFMFYPLITLELIDRGVGAGATGLIL GLLSGTGQILSGLIGTVNARLGSKTLAIGGLALRSVGLLVFAFDSNVLTYAVGAVVASLG SSSTALALKTELMRASSDRRTITMRSIAVNLGALVGPSIGGVVFVVASFSVIVLSVVTSY VLLGLGLLFVKFKPPEESGQDTKTRMRSDRRRLDRLFFVLIGCTLAYWGIYSQWPLVVPL YAESGFGTPLGSSWVYTGNAILILVLQYPLLVKLLKPVRSAYVLAIGFLLFVGSFLVLPI PAGPATVILFATLFSLAELLVSPTLDEVTAQLRREGTGLTRAYGATATAAGVSSLIGASA GGALIEHFDSPASVMYLAVPLAVLGFTGAVVLSRRKAGS >gi|294970775|gb|ADNU01000065.1| GENE 14 11199 - 12374 608 391 aa, chain + ## HITS:1 COG:mll9226_1 KEGG:ns NR:ns ## COG: mll9226_1 COG0439 # Protein_GI_number: 13488126 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Mesorhizobium loti # 127 319 141 346 458 71 28.0 2e-12 MIFYTLTPRQEVIDAAHNAGAKIVPVANAQFLSSLENFDGETVEVHDPLDALSVVRALEP FISAKGEQGDALCVGLGDDTSQVAALVNSALGLAEGKFASFTSLEIMRDKHRLREALPEW SPINGLHSMLDLTTGTDSRLQDFFRQTQHGLVLKPNSGSGSRDVRSVVSEVELQDLAVDP GQYLVEQRFVGPEFSVETISWEGQHRPLVVTEKVTGGITGLVETGHHQPARISEESRDRL FDAARTVLDSANYQFGLSHIEFILEDGQPRLIEAHGRVGGDHIADLMEWSVGATAFNILF SAYQHQRLPNDEPRGEQSAVFFPDLSECPHTDEQWLACVRQHEDVKDAGIMKAAGDRGPI TCSADRHAYVILSGQNISRTVQTLQSQKVLP >gi|294970775|gb|ADNU01000065.1| GENE 15 12423 - 13412 704 329 aa, chain + ## HITS:1 COG:MT2962 KEGG:ns NR:ns ## COG: MT2962 COG0582 # Protein_GI_number: 15842437 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium tuberculosis CDC1551 # 27 329 22 315 315 214 43.0 3e-55 MATSPHNANATGEPQHDRLSAEYLDALDRFHNELTVHKNASEHTVRNYIADATNLMEFLA RDGNGDPIHLADIEIGNLRQWLLHLSAQGASPGTLARRIAGIRSFFTFTTRAGITATNPA SRLSTPKKATRLPTVLQQSHTEDVLTQPFEPPAEDAKLTKTQRAARTRDIALVELLYATG MRVSELVNLDTTDVDWTAGLITVLGKGNKQRRIPFGGPSQRALTEWLEVRNHLASEGQEA LFVGVRGGRINQRQVRDVVHKATAKRAKSPEISPHGLRHSAATHMVENGADIRQVQEFLG HATLSSTQIYTHVSLGKLKDSYTQAHPRA >gi|294970775|gb|ADNU01000065.1| GENE 16 13419 - 14084 623 221 aa, chain - ## HITS:1 COG:lin2490 KEGG:ns NR:ns ## COG: lin2490 COG0702 # Protein_GI_number: 16801552 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Listeria innocua # 5 216 3 209 209 120 36.0 2e-27 MSTRIAIIGGHGKIARLVTERKGDVDITSVVRNPDHVDELSAMGAHPVVLDVETAAVSEL AEVVKGHDAVVFLAGAGGGSGVFRKYTSDLKAAITSQQAAKEAGVSRFVQVSFVGAEHPT AEGTDPVFAAYWDAKRIADDALRASDLDFTIVKPGRLTDEPETGKLSVSQGEVRKGSTTA RADVANFILHILEDERTYGKDLDILDGDTPLAESLDAYLAQ >gi|294970775|gb|ADNU01000065.1| GENE 17 14178 - 15176 441 332 aa, chain - ## HITS:1 COG:Rv2891 KEGG:ns NR:ns ## COG: Rv2891 COG0739 # Protein_GI_number: 15610028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Mycobacterium tuberculosis H37Rv # 27 186 27 188 249 71 31.0 3e-12 MISRILTTVSWLVLALTLMSATYVPDSVVYAAPGEHSDEASGTWMTPVPGFEVIRGFDKP DKNWQSGHRGVDVLALPGEPVRAPGFGVVRFVGVVAGKPVMSVEVGNYVVSYESVDSELK KGDEITPGMHMAKVSSPSHCPQGCVHVGVWRKDRAKDYLNPVNFFSSGASILLPEAQAPK PLAVDQQPSYKGKGKGAGPWGGHQNGRIPSVAMCAVKSAPGHMLRCDAARAFDELSAAFK AQFGRPISVTDSYRTYEQQVILKKRKGRMAATPGRSNHGWGLAVDLGGGINRFGTAEHRW LRANGPKYGWDHPGWARQGGSLPEPWHWEFMG >gi|294970775|gb|ADNU01000065.1| GENE 18 15558 - 16499 1231 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62422957|ref|ZP_00378132.1| COG0052: Ribosomal protein S2 [Brevibacterium linens BL2] # 1 313 1 323 326 478 77 1e-134 MAVVTTRQLLDSGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQQTLGYIDTAFEFIKET VAHGGSIMFVGTKKQAQEAIAEQAQRVGQPFVNQRWLGGMLTNFQTISGRLRRLKELEEI DFDDVAGSGHTKKELLILSREKEKLERTLGGIRDMQRTPSAVWIVDTKKEHLAVDEAKKL GIPIVGILDTNCDPDEVDYPIPGNDDSIRSVALLTRVVADAVAEGLLKRHSSDEGEKNVS AVDVEPMPEWERELLEGKGGDDAKADEAKAEETKEAKDETKVADAQEEPKAEAAQAESKE EAAADADNKSTEA >gi|294970775|gb|ADNU01000065.1| GENE 19 16554 - 17381 463 275 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 274 1 261 283 182 37 2e-45 MANYTAADIKALREKTGAGMMDVKKALDEAQGDQAKAIEILRVKGLKGATKREGRSTSDG LVAIKTDGGVGTMIEINSETDFVAKSDKFISLADEILELAVANNASDAEEFKNVEIDGKP VSQIITEGGASLGEKVDLKKVVRLEGAKLASYLHRTNKDLPPQVGVLLAYEGDNDQAAHD VAVHIAALAPKYFSRDDVPADLVEKEREIALETAKNEGKPEAALPKIVEGRVNGFFKENV LLDQGFAKEPKKSVQSVLDEAGIKATGFARVRVGS >gi|294970775|gb|ADNU01000065.1| GENE 20 17596 - 18228 667 210 aa, chain + ## HITS:1 COG:slr1198 KEGG:ns NR:ns ## COG: slr1198 COG0450 # Protein_GI_number: 16329971 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Synechocystis # 1 203 1 204 211 258 64.0 5e-69 MTLMLGDVAPDFTTETSAGEISFHDWVGDSWVVFFSHPADFTPVCTTELGRVAQLSEEWA KRGVKPIALSVDSNEEHISWIPDINSYNNTTVEYPIIADPDKTVAELYDMIHPNEGDTSS VRSVFVIDPFKKIRLTMTYPKSTGRNFDEILRVIDALQTADRAEVATPVDWKDGDKIIVP TGITTAEARERFDDVEEAFPYLRTARIREN >gi|294970775|gb|ADNU01000065.1| GENE 21 18312 - 19064 639 250 aa, chain + ## HITS:1 COG:ML1591 KEGG:ns NR:ns ## COG: ML1591 COG0528 # Protein_GI_number: 15827835 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Mycobacterium leprae # 9 249 37 278 279 290 62.0 2e-78 MESPVHFSSHAMHPVRTDRRRVLLKLSGEVFGGGSVGVNPDIVASIAKQIVPTVPEVEIS IVVGGGNFFRGAELQQRGMDRTRADYMGMLGTVMNCLALQDFLEQQGLDTRVQTAIPMSQ VAESYIPRRAMRHMEKDRVVIFGAGAGLPFFSTDTVAAQRALEIHADEVLIAKNGVDGVY TADPKKDPSATKLDHITFQDALTRGLKVVDATAFSLCMDNALPMRVFGMEGDGNLRRAIM GEDIGTVVSA >gi|294970775|gb|ADNU01000065.1| GENE 22 19140 - 19697 778 185 aa, chain + ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 1 185 1 185 185 189 52.0 3e-48 MINGILKEASAKMDGAIEATQSAFGNVRTGRANPGLFANIPVEYYGTPTPMQQLASFQVP EARTILITPYDRGALTDIENALRNSDIGANPANDGNVIRVTLPELTEERRKEYVKIVKGD AEEGRISVRNVRRKAKEQLERIQKDGEAGEDEVKHALGELDEITKKKVDEIDSLLAAKEK ELLEV >gi|294970775|gb|ADNU01000065.1| GENE 23 19687 - 20655 943 322 aa, chain + ## HITS:1 COG:ML1589 KEGG:ns NR:ns ## COG: ML1589 COG0575 # Protein_GI_number: 15827833 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Mycobacterium leprae # 53 318 32 312 312 181 39.0 2e-45 MKSDLSSYDERQSNASTGASSMSQNTEATRQANPQGAEPNPQAPQPPKQDYGRAGRNLPA AIAVGLVLGGAVLASLVFIPELFLIVALVGVMAATWELSNALSRSGSKVARVPTMISAGT MILAAYFLGREALWVAFSLGCGFILIYNQIRRHRLNPVKDVCLSIFALTYVGLMGSFIAY MLSFPMGNMLVITFLAMVVASDTGGYTFGVLWGKHPIAPSISPKKSWEGFAGSALFSTVV GICMVVLAFGAPWWTGLVLGIVIPAFATLGDFSESMIKRDLGLKDMGTLLPGHGGVMDRL DSILPTAPVALALFHFMPGLVL >gi|294970775|gb|ADNU01000065.1| GENE 24 20715 - 22040 994 441 aa, chain + ## HITS:1 COG:Cgl1973 KEGG:ns NR:ns ## COG: Cgl1973 COG0820 # Protein_GI_number: 19553223 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Corynebacterium glutamicum # 33 439 7 364 366 388 50.0 1e-107 MAQNLTPRQVRPVVEHEDGTTSKTPMRDGRPLLNFRSPRVKQPPQHLADLSLEELTQAVK DKGLPGFRAKQLATHYYVHNTTDPADMTDLPADQREELAAEFFPPLLTEVRRLRTEDGDT IKFLWRLFDGAMVESVLMRYRNRITLCVSSQCGCGMNCPFCATGQQGLTRNMSTAEIVDQ VIQANRVIAAGELAPTAGATTNYLGEEAAEVGSEADASDNSATLQAAGTPETSATTSAGV HDRVTNVVFMGMGEPLANYKRVMNAVRRFTTPAPAGLGMSPRRITVSTVGLVPGIKKLAA ENIPVTFALSLHAPDDDLRDEMIPVNTRWNADEAIDAAYDYYKTTGRRVSIEYALIKDMN DHAWRAELLAKKLNARGRGWVHVNPIPLNPTPGSVWTASEPEVAAEFVRRLVKAGVPTTI RDTRGKDIDGACGQLAAEDED >gi|294970775|gb|ADNU01000065.1| GENE 25 22071 - 22607 576 178 aa, chain + ## HITS:1 COG:no KEGG:Achl_1389 NR:ns ## KEGG: Achl_1389 # Name: not_defined # Def: hypothetical protein # Organism: A.chlorophenolicus # Pathway: not_defined # 7 178 22 194 194 150 47.0 3e-35 MSGWKNGYDPAQVDSFFKRARESYERETPQPGDLDARAVRTVGFDLKRGGYHVGVVDAAL DRLEDAFAKRSREQLITTSGEQAWVDELTRAAGSLRGRLSREPGERFNLAERGTIGYDIE EVDKMCDKINAYFTDGLAMSVDEVRRVLFKIRKGKKAYNEDQVDAFIDRVVEVMASVD >gi|294970775|gb|ADNU01000065.1| GENE 26 22660 - 23217 388 185 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396361|ref|ZP_06806527.1| ## NR: gi|295396361|ref|ZP_06806527.1| possible acyl-coenzyme A synthetases/AMP-(fatty) acid ligase [Brevibacterium mcbrellneri ATCC 49030] possible acyl-coenzyme A synthetases/AMP-(fatty) acid ligase [Brevibacterium mcbrellneri ATCC 49030] # 1 185 1 185 185 339 100.0 7e-92 MNPVYELLDFPVAMGRADDVFVRDRNCFGELVELTFAEVLDRSAKFAGVLRLMDVGEGTC VSVASDVSPLTAHLVRLGAWRVGACVAPADPGASVRVVAGETPAQSPSERGAHQAFSKPV KALPSHFEGAVALFEGNEFVLDTVVRDARVESAAVVELRPDAVVQCPNAPNTQRLTALEA IATYA >gi|294970775|gb|ADNU01000065.1| GENE 27 23319 - 24512 1348 397 aa, chain - ## HITS:1 COG:MT0410 KEGG:ns NR:ns ## COG: MT0410 COG1960 # Protein_GI_number: 15839783 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 1 396 1 395 396 454 56.0 1e-127 MAKTQTPDEILQIDSVFSKEDLEWAGVVRKWADDNLRDKIGDWYLEGTIPARELAKELGQ LGVLGMHLEGYGCAGSSATQYGLACRELEAVDSGLRSLVSVQGSLAMFAIHHWGSEEQKN EWLPRMAQGEAIGCFGLTEPDVGSDPSNMRTVAKRDGDDWVLNGAKMWITNSPVADVAVV WAKTDEEDDKGRPVIRGFVVPTDTPGVECPKVQRKLSLRASITGEIVLDNVRLPADAMMP KAKGLRGPLTCLSEARFGIVFGATGAARDALEQALMYTGSRIQFDKPLAAFQITQQKLAK AFGQYSQITLLAAHLGKLKDTTGVRPEQISLGKMVTADTAMNICRDLRALFGGSGITSEY SPLRHAINLETVLTYEGTHEVHQLTLGRSLTGINAFA >gi|294970775|gb|ADNU01000065.1| GENE 28 24666 - 25865 905 399 aa, chain + ## HITS:1 COG:ML1583 KEGG:ns NR:ns ## COG: ML1583 COG0743 # Protein_GI_number: 15827831 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Mycobacterium leprae # 5 393 14 386 406 303 51.0 3e-82 MAVRQIAILGSTGSIGTQALELISAHPDRFRVSALSAGANVELLARQAVEFGVPVIGCAA HAEAVVASAVDAAASEAGKPNPVREIVCGPEAAARIAAMPTDTVLNAITGAAGLTATHAS LQAGTDTALANKESLIIGGTMITDLAASTGARLLPVDSEHSALWQALRAGTHREVDRLVL TASGGPFRGMTREQLERVTPQQALKHPTWDMGRVITTNSASLVNKGLEVIEAHLLFDVHY DRIDVVVHPQSNIHSMVQFVDGSTLAQVSPPDMKLPIAYALGYEEHIPAATTPNDWSQPV TWTFEPVDHNAFPALRLAARAGRAGGVHPAWYNASNEVFVDAFHDGHITFTAISDGLAAA LDKADQLNVENNVTGGLTLEQVLEADAHARTWAHEWVNA >gi|294970775|gb|ADNU01000065.1| GENE 29 25850 - 27373 1544 507 aa, chain + ## HITS:1 COG:Cgl1968 KEGG:ns NR:ns ## COG: Cgl1968 COG0750 # Protein_GI_number: 19553218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Corynebacterium glutamicum # 165 501 82 402 404 142 32.0 1e-33 MGERMTVLLYILGVILFLAAIGLSIGLHEIGHLVPAKKFGVKVTDYMIGFGPTLVSFKRG ETRYGIKLLPLGGFIAMPGMYPPKEATHTRAQDVPNEKTVQGIVREAAKKRHANQELAHS QAQDHTDPQQPVVTDTREDGTPRKGRLFENTLADARDFSNRGIAPGEEHRTFYALNLPKR LVVMFGGPFMNLLLGIAILALVLLGIGVPGPSTTVATVVECAVPASEAQARQAAGNDDCT PKDQLTPAWETGIKPGDRILEIGGTPVESWDHMTEQIRAAAGTTVPIKLERDGQVITKDV PIITSERPKTDEDGAPIVNSDGTPETEQAGFLGVSPTQELNPIPVSEFPATVWSSITQTF SALFHLPQRLVEIGQIAISGGDRPADGPIGVVGIGRVAGEIVSTDLFDVVDKVQLGLSLV ASLNFFLFAFNLVPLLPLDGGHIAVALYEGARRRINLARGRGIVGPFDTARLLPLTYGVV GVMLVMTFLLLYVDLFNPITLRDLFGG >gi|294970775|gb|ADNU01000065.1| GENE 30 27469 - 28614 1161 381 aa, chain + ## HITS:1 COG:MT2936 KEGG:ns NR:ns ## COG: MT2936 COG0821 # Protein_GI_number: 15842410 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 4 380 3 386 387 558 77.0 1e-159 MPAVNLGMPSTPTVLAPRRKTRQIKVGSVGVGSDYPVSVQSMTTTKTTDINGTLQQIAEL TAAGCDIVRVACPSADDAEALPAIAQKSQIPVIADIHFQPKYVYAAIEAGCAAVRVNPGN IRKFDDQVKEIAQAAKDHGTSIRIGVNAGSLDKRIMQKFGKATPEALVESAVWEASLFEE HDFHDFKISVKHHDPVIMVEAYRQLAERGDWPLHLGVTEAGPAFQGTIKSATAFGALLSE GIGDTIRVSLSAPPVEEVKVGTQILQSLNLKQRKLEIVSCPSCGRAQVDVYELADKVTEG LKGLDVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIKTVPESKIVETLIE EALRIAEENGDPSGEAEVVVG >gi|294970775|gb|ADNU01000065.1| GENE 31 28653 - 29444 394 263 aa, chain + ## HITS:1 COG:MT2935 KEGG:ns NR:ns ## COG: MT2935 COG3393 # Protein_GI_number: 15842409 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 48 262 64 282 284 112 36.0 5e-25 MQGVCAGDPAGTITIQRLVDGAGTAQIDAPSGVMWGVHSEQGSALTPESAFWIGYSVTPL TPSLNGTADVAAVLNRRGRYTCSVVGHRAPVLDVYRRLTWGPPRGIRPHQPLLVACERPA VDEIPVRVAMAEDYEQVYAASVAMFTEEVGFSPERPNPSGYRARVRSLLSGGHTLVLTDA DTVIFKADLGIISSRAVQVQGVWVHPSYRGQGIASRAMVSVTRHALAYAPTVSLYVNSFN TSALGAYARAGYRQIGEFATVMY >gi|294970775|gb|ADNU01000065.1| GENE 32 29625 - 30617 1273 330 aa, chain + ## HITS:1 COG:no KEGG:RSal33209_3437 NR:ns ## KEGG: RSal33209_3437 # Name: not_defined # Def: transporter # Organism: R.salmoninarum # Pathway: not_defined # 39 327 23 306 308 320 57.0 4e-86 MMMATSNKKKKKKKGKKGKKGASFDPKSLIKPAIWAGVAIVAIVIVVLIANWLRSLDSVA AFIEKYPGEYELPEGAPVGFPAWLNWQHFLNMFFMLLIVRSGWLIRTTPKPDSFWTRDNT KFIKTKGEPKKISMNHLIHFSFDTLWVLNGVIFFILLFVTGQWMRIVPTSWEVFPNALSV ALQYASMNWPVENGWVNYNGLQQLAYFTTVFIAAPLAMITGLRMSEVWPIKGKFNDVYRV EHAAKIHFPVMIYFVAFTAVHVFLVFATAIAAGKGPFANLSHMFAAAPDKPILGLILFLV ALVVMAAAWVVIRPIFMAPVAGKFGNVTTR >gi|294970775|gb|ADNU01000065.1| GENE 33 30641 - 31045 461 134 aa, chain - ## HITS:1 COG:Cgl2072 KEGG:ns NR:ns ## COG: Cgl2072 COG1188 # Protein_GI_number: 19553322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Corynebacterium glutamicum # 17 132 10 126 126 98 44.0 3e-21 MLECMIEPTFDSHGSQRIDSWLWAVRIFKTRTLSASVIKGGHVRVDGEKVKASYKVKIGD EVHIRRHGIDRILVVQGFLATRGPASVARVCYVDNSPEPSPLLRAPVPRRDKGTGRPTKK DRRALDKLRGRSSF >gi|294970775|gb|ADNU01000065.1| GENE 34 31118 - 32947 1989 609 aa, chain + ## HITS:1 COG:Cgl1948 KEGG:ns NR:ns ## COG: Cgl1948 COG0442 # Protein_GI_number: 19553198 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 596 1 585 588 615 56.0 1e-176 MPLRMSTLFVRTLKEEPADADVKSHKLLHRASYIRRSAPGIYTWLPLGLRVLDKVEAIVR DEMSKAGSQEVHFPALLPAEPYEKSGRWEAFGEGIFRLQDRKKADYLLAPTHEEVFTLLV KDLYSSYKDLPASLYQIQTKYRDEARPRAGLLRGREFIMKDAYSFDTDDAGLDAAYEKMR KAYINVYNRLQLPFVMVEATPGAMGGSGTHEFLYPSEVGEDTYVRTDGGYAANVEAVTTV VPEELDYSDAPAAQVVHSPGTTTIATLVDFANTHHPREDRPWTAADTLKNVVCTVVHPDG EREVVVIGLPGDREVDLGRAAGTGMLGAGEVDLEPATDEDLEKHPELVKGFIGPGISLDQ AVLGLEGSIKIRYLLDPRVVKGTRWVTGANEVDKHVFGLVVGRDFVGDEFIEAAEVVAGD PAPDGSGELQLARGVEIGQIFKLGTRYAEALGLSVLDENGKARVVTMGSYGIGVSRVLAC IAEEHADDKGLVWPANLAPADVHIVATGKDAQVFDVAEELTAEVEKAGYTVLLDDRPKVS PGMKFGDAELLGMPTIVVVGRGLKDGVVELRDRATGETTNLPVDTAGQKIVDAIAEKLDA INNIELLEQ >gi|294970775|gb|ADNU01000065.1| GENE 35 32950 - 33780 858 276 aa, chain + ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 25 270 4 248 252 157 42.0 3e-38 MLTAILSQPEALAVAHVDLDITTILLLVLASALAGWIDAVVGGGGLIQLPALLLVPGMTP IQAVATNKIGSICGTTVSATTYLAKVKVDKSVTVPGAIFALIGAVMGALVASQIPEKAFT PIILVVLIGVGVFTLAKPSLGTEARLRFSERPRMHHGVSWLIGLLVGMYDGALGPGTGSF LVIGLVAVVGFSFLQASASAKVMNWATNFGSLLFFVPAGFVVWKAGLAVAVGNVIGGFFG AKLAISKGSKFVRVVFVVVVSALVLKLGFDMIRENL >gi|294970775|gb|ADNU01000065.1| GENE 36 33786 - 34244 100 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396371|ref|ZP_06806537.1| ## NR: gi|295396371|ref|ZP_06806537.1| hypothetical protein HMPREF0183_2035 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2035 [Brevibacterium mcbrellneri ATCC 49030] # 100 152 1 53 53 99 98.0 1e-19 MASAHSPRLGILHDRSPARRHGIYQFFDTQDPGYGDRLLETPDFGCDTIWEWLNAQGLTV GLINVPMSHPPRGLDGYELTWPLRKTLRFSHPQPCRAMSVLVTSNVKSKLGRQLLGTNTF RLVSSRPDGAKRAKLRIILRSFARFAPFRPDV >gi|294970775|gb|ADNU01000065.1| GENE 37 34562 - 34924 275 120 aa, chain + ## HITS:1 COG:no KEGG:Cpin_1311 NR:ns ## KEGG: Cpin_1311 # Name: not_defined # Def: glyoxalase/bleomycin resistance protein/dioxygenase # Organism: C.pinensis # Pathway: not_defined # 1 120 1 124 125 110 47.0 1e-23 MAITLNGLRTVVYPTDDLAASKACWSELLGMDPYFDQPFYVGFEVGGYELALDPDGDVNG GPVVYWGVDDIEDCHERLIASGVSSVDDVSEVGDGIRVAVVRLPDGSKLGLIENPHFKVS >gi|294970775|gb|ADNU01000065.1| GENE 38 34927 - 35706 114 259 aa, chain - ## HITS:1 COG:no KEGG:Franean1_1660 NR:ns ## KEGG: Franean1_1660 # Name: not_defined # Def: oxidoreductase domain-containing protein # Organism: Frankia_EAN1pec # Pathway: not_defined # 6 211 118 328 364 104 36.0 3e-21 MSSDAVLMTAISAVFRADVRLLVDSIGPGPFDIGASWWRREGVPGVNSWFTDRKFAGGGA LLDLGWHLADVAYAMFTASMTGVTSELTPMANLSASARWRRSTDMATASSARDVEVAGRL TVHFADGSVLRISTAWASEVTYDCTRIRIATPQRSADLQTTFGFSPNRESAPRLVLADGT ASTVHSFENQTGSEYTEQVNAMITAVYQARQGVPRPFGWTHNARVVMNFRSKPMLQREPR CNIGTENISLMGGQPAPSP >gi|294970775|gb|ADNU01000065.1| GENE 39 36022 - 36177 109 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396374|ref|ZP_06806540.1| ## NR: gi|295396374|ref|ZP_06806540.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 6 51 1 46 46 84 100.0 2e-15 MNVDEMARMCPKSENVAARELWIAHKTLLAEPPTIQLVGELVGDLVSRVRR Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:06:00 2011 Seq name: gi|294970772|gb|ADNU01000066.1| Brevibacterium mcbrellneri ATCC 49030 contig00099, whole genome shotgun sequence Length of sequence - 3444 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 449 - 1546 798 ## gi|295396376|ref|ZP_06806541.1| conserved hypothetical protein 2 1 Op 2 . - CDS 1618 - 3180 1015 ## gi|295396377|ref|ZP_06806542.1| conserved hypothetical protein - Prom 3384 - 3443 76.7 + TRNA 3369 - 3444 88.1 # His GTG 0 0 Predicted protein(s) >gi|294970772|gb|ADNU01000066.1| GENE 1 449 - 1546 798 365 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396376|ref|ZP_06806541.1| ## NR: gi|295396376|ref|ZP_06806541.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 365 4 368 368 451 100.0 1e-125 MRITALSATALAVAALGGAPALAAIPQAPASITGTASASDPTDEPSPAPTDGPTAEPSPA PSPEPTTEPTPKSTKDPGQSVTPSTVINRGEWYQVMVDDKPAPEGSTFSAVERKQDGKEK IHDFIVGEGGRAFHLDTSKPHDQGEAVDPREVTLKIENGSVEFINKPTPTPPPNDGKTPP EDDNGSQKPPRPKPPLTKPPAPNPPDEDGRQPGKRPGNHGDGNSGDESDNQENPDGKDGN TKADDKDRTQDPDTGNGTVPGQAGTDWTPGDSGDEQTHAPDYSDPVPQNPDEAGEVSEDI IAGPEPSQENHTGAPTAPSNESEDKAVDAAEPSGSFPWSLAVLLGAGAVGLFLAVFLFAR RKSED >gi|294970772|gb|ADNU01000066.1| GENE 2 1618 - 3180 1015 520 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396377|ref|ZP_06806542.1| ## NR: gi|295396377|ref|ZP_06806542.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 520 1 520 520 933 100.0 0 MPRVEVTIDADRTAHLTLDGTQKTFPDLGAAMSELARYARHTQQPVNVSVQDGDTSRNLT FTPEGRLAPTQEQPSQEQPRETKPTTPPKPDLPPTQPTTPPPNNNRPDRFSGPAQQATPA IANGNRKTLRKKPRPTKPPRKTKRGLTIPGIVLAILLVGVVAAYFVPRFIGSPDNGTPQS IESSSSQNPNGLRAVEEQREPVPGFGHRAAWEHKVPAGASVTASDRGVLIIDGKNLKVLD PYNGQTKYETTANGQLEFAVDTRIESKNALVWRIGDSAYALLDGEKDAREYKLPASARMS SAGTHVLIKSGNQLSTFGMDGLKQLPTPDPGTTPMALDGDALISARFAGPLIATNVETGE VKKVSLEKPAEDLHVIRWVSAGHGKVVTLWGEAGSSVSSGHRIQVVVHHVDTGKIASTVT TSTDSVGEANWVRGQGYQLATFGPYMFSMKDGLLVQDGTVDDVAFNEPRGNIAPATVDGA QALITDNVAYRSNAKLLAVGKDESFAIVRSNPETISGYTK Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:06:59 2011 Seq name: gi|294970765|gb|ADNU01000067.1| Brevibacterium mcbrellneri ATCC 49030 contig00100, whole genome shotgun sequence Length of sequence - 5841 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 21 - 887 763 ## COG3739 Uncharacterized integral membrane protein 2 1 Op 2 . - CDS 907 - 2382 1346 ## COG3104 Dipeptide/tripeptide permease 3 2 Op 1 . - CDS 2528 - 3337 768 ## COG0524 Sugar kinases, ribokinase family 4 2 Op 2 . - CDS 3325 - 4314 409 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 4399 - 4458 4.5 5 3 Op 1 . + CDS 4340 - 5275 708 ## COG0294 Dihydropteroate synthase and related enzymes 6 3 Op 2 . + CDS 5309 - 5840 201 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis Predicted protein(s) >gi|294970765|gb|ADNU01000067.1| GENE 1 21 - 887 763 288 aa, chain - ## HITS:1 COG:CC0458 KEGG:ns NR:ns ## COG: CC0458 COG3739 # Protein_GI_number: 16124713 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Caulobacter vibrioides # 12 282 4 268 284 239 49.0 4e-63 MMFESTQLEHYLDGKAHAWLYKHRHASGLTRWVVEFTVFVLKQAWACIFGASFLVVLIAF RLWWPESAIVSRNDALVIAAVIIQILMITLKLETGKELWVIMLFHVVGTGMEVFKTAVGS WSYGDHGVLRIGHVPLYSGFMYAAVGSYMVRVYKLFDLRFNRYPPRWLTAVIALAIYINF FTHHYIFDFRWILTFAVIACFAPCVMLFKNHRSRPYRHLPLLLPFIGTAFFIWLAENIAT WAGAWIYPSQQNGWELVSIQKLVAWFLLMIISVVIVTFVYPPRPHQKV >gi|294970765|gb|ADNU01000067.1| GENE 2 907 - 2382 1346 491 aa, chain - ## HITS:1 COG:Cgl2994 KEGG:ns NR:ns ## COG: Cgl2994 COG3104 # Protein_GI_number: 19554244 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Corynebacterium glutamicum # 15 491 28 508 508 351 44.0 2e-96 MASAATHTGEHSQTRDTRFFGHPLPLAQLFGLEMWERFSYYGMTGLLALYLYTAVDQGGV GLEEPTALAIVGAYGGAVFLATVLGAWLADRLLGAEPVLFWSAVIIMAGHIALALLPGLG GVAVGLILVALGSGGLKANASALVGSLYDEKDSRREAGFSIFYMGVNLGAFLGPLLTGIL QQRIGFHIAFGAAAAGMAVGLVIYLTGRHKMPAEARRVPEPLPRKKMWVLPVAIIGTVLA IFVLWTTGLMNKENLATWTALVSLGAAVVYFAVMLASKGVTSTERSRVVSFIPYFIASIA FWSLYQQIFNVMTSYSQNQLDRTLFGWEMPINWIQLIPPIFVIALAPVFSAIWLKMGDRQ PSAPVKAGLALIIIGGAFLMFLVYANAEKNTVPLLWVTLIFMLFVIAELLISPIGLSLST RLAPKAYTSQMIAVFFLSSGVGTALSGVFSEYYDAASQVPYWSALGAGSIVVGVVVLAVA KPVVKLMKGVR >gi|294970765|gb|ADNU01000067.1| GENE 3 2528 - 3337 768 269 aa, chain - ## HITS:1 COG:SSO0004 KEGG:ns NR:ns ## COG: SSO0004 COG0524 # Protein_GI_number: 15896975 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Sulfolobus solfataricus # 4 264 2 275 293 143 35.0 4e-34 MGKVIVVGSVNVDTVLMVNRHPRVGETIFTNKLVIQPGGKGANQAVAAARAGAKTYLVGL TGSDNDGKRYRKHLVNCDVDVSHLGQVDGYTGSAYIVVDSRGENSIVVDPGANQHVGDDQ IEAVRQLVEPGDVVTSMNEVPTPAIIGALEAAKEGGATTVFNPSPWEEDMLRLVEMCDIV VANEFESQQLGSENHSIAMTFGARGALWDGIFAPAPAVKAFDSTGAGDVFTGTLCAMLAQ GASKEDALTVAVHKASHSVTHQGAQIWTV >gi|294970765|gb|ADNU01000067.1| GENE 4 3325 - 4314 409 329 aa, chain - ## HITS:1 COG:ECs0690 KEGG:ns NR:ns ## COG: ECs0690 COG1957 # Protein_GI_number: 15829944 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli O157:H7 # 7 284 2 277 311 169 36.0 8e-42 MRLTTPATPAILDVDTGLDDAYALMFAACCPGIDLLGVTCAAGNVGVDQVVRNTLDVLDM SGAAEVPVASGATGPLADDHRSADHYHGKNGVGGVQLPRSPRKPVEEPATEFLYRVLSES SPPVTLIALAPLTNIALLLRAYPEAHKHIDRIVWMGGARRYGNVTASAEFNAWSDPEAAH EVLHSGIPITLYALEPFYTVTVSSQRVAEYTSAEDPRIRTIGEMLTYSQTRNAGETRIPD HTASCLGDAGAVMSVAAPELTTTSRLSVDIELDGSLTRGRTVMDERTSHTDTQPNDEPIH TQVITEVDYEAMEQLFINTVIAGVDTWAK >gi|294970765|gb|ADNU01000067.1| GENE 5 4340 - 5275 708 311 aa, chain + ## HITS:1 COG:Cgl1087 KEGG:ns NR:ns ## COG: Cgl1087 COG0294 # Protein_GI_number: 19552337 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Corynebacterium glutamicum # 37 302 7 273 277 201 44.0 2e-51 MKHKIAGSGGGEAWKYDVCMRGSIGPTGLGKNEKVAIMAVVNRTPDSFYDKGATFGLDAS VQAAVGALDAGAHWIDIGGVPFGRGPHVSAEEECERVVPFVRALLRERPEAVISVDTYRS QVAREALEAGAQVINDTSGFVDAGMIDVIAQTGAYAIVCHSAGKPREEKPAAYYDDVVAE VVAFVRERVERLRQAGVASDRIIVDPGHDLDKNTLHSLELTRRLDEIVDMGFPVMVAVSN KDFIGECTNREQGQRLAGSLAAMTACVMSGARIVRMHDIGATVDAVHMTEAILGLREPFE LIHNTHPTHNV >gi|294970765|gb|ADNU01000067.1| GENE 6 5309 - 5840 201 177 aa, chain + ## HITS:1 COG:MT2745 KEGG:ns NR:ns ## COG: MT2745 COG1985 # Protein_GI_number: 15842209 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 9 177 4 176 239 104 36.0 1e-22 MEIRELDQLTDSELLDMYAFPSGPWVRMNFISSIDGAATVDGLSGGLGDEHDQRLLRVQR LPAHCVMVGSGTLKAEGYGAMRMSHADQEWRVRHGLAAHPTLVVVSNRLSVEPEDAMFVE APVRPVVVTSEAAPVGKRERLADVAEVVVAGERSVFPVRVVEELKARGLTHVHGEGG Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:07:03 2011 Seq name: gi|294970754|gb|ADNU01000068.1| Brevibacterium mcbrellneri ATCC 49030 contig00101, whole genome shotgun sequence Length of sequence - 9965 bp Number of predicted genes - 9, with homology - 8 Number of transcription units - 7, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 242 - 652 67 ## - Term 553 - 584 -0.8 2 2 Tu 1 . - CDS 687 - 2087 1288 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 3 3 Tu 1 . + CDS 2289 - 3251 843 ## COG2962 Predicted permeases + Term 3311 - 3346 1.1 4 4 Op 1 . - CDS 3282 - 4319 930 ## COG0142 Geranylgeranyl pyrophosphate synthase 5 4 Op 2 1/0.000 - CDS 4316 - 5611 860 ## COG0644 Dehydrogenases (flavoproteins) 6 4 Op 3 . - CDS 5612 - 6535 407 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 7 5 Tu 1 . + CDS 6384 - 7742 967 ## COG1169 Isochorismate synthase 8 6 Tu 1 . - CDS 7772 - 9397 1127 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 9 7 Tu 1 . + CDS 9433 - 9964 481 ## gi|295396395|ref|ZP_06806558.1| ABC superfamily ATP binding cassette transporter, membrane protein Predicted protein(s) >gi|294970754|gb|ADNU01000068.1| GENE 1 242 - 652 67 136 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIPVPAGSIVLRDARTKTSRTAELRQFHIASTPVTWELYSRVLEAPVPGDEDENAPAHSV SWRHALTHPPMHRPSPRITKLTNRLRYRLRTLKNPQSQTPLLLRIRHNGILQESVRIPNC ALYCAVSLALRRLAPG >gi|294970754|gb|ADNU01000068.1| GENE 2 687 - 2087 1288 466 aa, chain - ## HITS:1 COG:Cgl2757 KEGG:ns NR:ns ## COG: Cgl2757 COG0493 # Protein_GI_number: 19554007 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Corynebacterium glutamicum # 1 461 1 453 457 459 52.0 1e-129 MNRPLRVAIVGAGPAGIYAADLFTKAERDFEVSIDLFERLPAPFGLVRYGVAPDHPRIKG ITNALVKILDRGDIRLFCNVDFGTDIHLEDLQKLYDVVIFSTGCFIDANLRIPGVDLPRS YGAAEFVNWYDAHPDVSQEWPLDQKSVAVIGNGNVALDVARMLAKQADDLLTTEIPDHVY QGLKKSQVTDVHVFGRRGPAQAKFTPLEIRELGQVKDVDIVVYPEDFEFDEGSMKSIQES NQVKQVTKTLTDFTLREPTGAKRRLHLHFLHSPVSILGDEESGVTGLRTERQELDGTGNV TGTGEFHDWDVTAIYRAVGYFGTPLPQLPFDARKGVITNVEGRVVDGESQMTANEAPVIP GVYVTGWIKRGPVGLIGHTKGDALETIGHVITDFVEGKLPEPDNADESAIVELLKSRGVD FIDWEGIHRLEAAERASGAPHGRERIKVATREGMIAAAREAVTEGR >gi|294970754|gb|ADNU01000068.1| GENE 3 2289 - 3251 843 320 aa, chain + ## HITS:1 COG:Cgl2080 KEGG:ns NR:ns ## COG: Cgl2080 COG2962 # Protein_GI_number: 19553330 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 30 311 1 278 280 208 42.0 1e-53 MNAHPNNSPNTPEPNPGIPDDEQARRKAGLIFGLSAYLLWGVLPLFFMAIQPAGPLEILA HRIIWSLFFCLILLLFARGYPRLWRLLRTLRVLGILAVAAITVAINWFIFVLGVDMGRIV EVSLGYYINPLVSVLLGVLFLKEKLRPLQWLAMGIGTVAVIVIAVGNGQFPFLGVGVALS FGLYGLIKKQIGSRAGALEAMTIETIVLFIPSVTYVLFLMSQGQSNFETQGSLHVILMLC LGPVTAIPLILFGSATSRIPLSWVGMLQYVTPTMQFLTGVFLLGEDMPLSRWAGFCIIWV TVVLVCVDGVMAARRRRRLR >gi|294970754|gb|ADNU01000068.1| GENE 4 3282 - 4319 930 345 aa, chain - ## HITS:1 COG:Cgl0466 KEGG:ns NR:ns ## COG: Cgl0466 COG0142 # Protein_GI_number: 19551716 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 11 343 15 348 350 209 41.0 6e-54 MTSTSTPKNYGRLALDAVGGSLSEEMTNMLVGELQHVETVLDAAASQTSAFADETSHHLM RAGGKRVRPMLVLLCSQLGGGVSPRVHTAAAAVELVHLASLYHDDVMDEAPKRRGALSAH EKWGNNVAILTGDLLFARASQLSLEVGAEAMRVQAETFERLVLGQLHEFVGTTESDDPIE HYLSVLADKTGSLISASCQFGVIASDGPAELLPVVKEYGEAVGVAFQLADDVIDLTVDGK DSGKTPGTDLREGVATLPVLLARKAAQAGDESAAEVVAKVDADLTEDAALEEARQALAGH EVLEQTRAEARAWADRAVEALAPLPDGEIKDALATFAYGTVERAR >gi|294970754|gb|ADNU01000068.1| GENE 5 4316 - 5611 860 431 aa, chain - ## HITS:1 COG:Cgl0465 KEGG:ns NR:ns ## COG: Cgl0465 COG0644 # Protein_GI_number: 19551715 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Corynebacterium glutamicum # 4 409 8 396 424 213 35.0 4e-55 MADFDVIVVGAGPGGSAAATHMARGRLRVALVEKAGFPRDKICGDALTPRAVRELGYLGF ENPGWHANRGLRLFGGGHRVELEWPRVSGMPNYGLTAPRTVLDEALARHAQASGAHLFEH TQVTEAFFENGWVAGVHAEVTDDRGRRTGERVTFRAPLVIAADGVSSRTAVKMGIRKRDD RPMGVAVRTYFDSPRHDDDFIESWLELRADSGSGGSGEPLPGYGWLFPLGDGTVNVGLGM LNTSPDFRSVDYKKTLHQWAGSVGPRWGIDPATALADAKSAALPMAFNRTPHFKDGVMLV GDAAGMVNTFNGEGIDYAMESARIAADIVVTHHGYPTGAWKSMMSSYPSIVRDAYGSYVT MGRVFANLIGHPQIMKLGLKYGMSSSTLMKFVVKLFANVYEERSGKDILDHVIAGLERVV PATSNETGMGT >gi|294970754|gb|ADNU01000068.1| GENE 6 5612 - 6535 407 307 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 84 297 1 221 221 161 39 2e-39 MLVAGSPPTNGAGDSGVTPSTNHDRTDSVGTVSPGRTVRVSAFVSPFTSFMVAGRDFAKP RQTCEDKGMSRAHLDKQKSDVASMFDAVADRYDLTNDAMTFGLSRWWRVENTRSVDPQPG EKILDLAAGTGSSSVPYAQAGARVIAGDISEGMLEVGRKRHPDIEFVYADALDLPFDDNE FDAVTITYGFRNVQDPARALAQMLRVLKPGGRLVITEFSTPTFAPFSKFYKQYIMRALPA VAKVVSSNPEAYVYLAESIREWPAQMDLSYMMRDAGFDQVKYRNLTGGIVAIHHAVKLGA VKPGGQS >gi|294970754|gb|ADNU01000068.1| GENE 7 6384 - 7742 967 452 aa, chain + ## HITS:1 COG:lin1784 KEGG:ns NR:ns ## COG: lin1784 COG1169 # Protein_GI_number: 16800852 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Listeria innocua # 97 444 94 458 462 159 29.0 7e-39 MKDVNGETNAETLTVRPGDTVPTLSVRSWFVDGVTPESPAPFVGGLPATSMEFLTQLPTD TLACWVRGNSGLVGFGRAVRIRARGANRFSDLSTMWRSISGNATVDNPVRLPGSGLVGFT TIAFAEDSQAESVIDIPQFIMGRRDGRVWLTAVNVTGTPHTELKLRDVALQTPRDPQVHD GHVSGERYTRAVTEAIEIMQSGRASKIVVAQDAVVETSNDIDVRALVGALNQAYPSTWTF CVAGMVGATPELLISRSGDRVESRVLAGTYRVAHDPRSELAAARAQLGGAKDTAEHRYAI DSLAQTLKPLCSELEVDPEPHLLALSNVIHLASDAHGVVKPGHTLLDVAQAVHPTAAVGG VPREAAWEHIAHVEKADRGRYAGPVGWIDGNGDGQLGIALRCGQLESRNKIRLWAGCGIM PDSDPASELAETRAKLTPMMTALGVAHLIDQV >gi|294970754|gb|ADNU01000068.1| GENE 8 7772 - 9397 1127 541 aa, chain - ## HITS:1 COG:MT0581 KEGG:ns NR:ns ## COG: MT0581 COG1165 # Protein_GI_number: 15839953 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 5 531 1 528 554 190 33.0 8e-48 MNRDVNISTATAREIAHDCVRAGMKHVVVCPGSRSAPLTYAFAELDRQGIITAHVRIDER SAGFLALGIAKGLRAQRTPGPVGVVTTSGTAVLNLGPAIAEAAYSHVPIVALTADRPARL RVTGANQTLDDQSRALPEVFAAYDVPAGEPAPVAEALAVAMGETGLPGPVQLNVQFDVPL VPEATDFPWDVPREVTQGHQFHPSEQDIQALADALDALKKPGTVAVVGDCSGFDDSHGVV RGMLVGVPVFAEPTSALVDMSVPVPHRVLDARGWDDVTTVVQYGKVTLFRPTAKLLAQRP VFTIPLNAEWWPEEALERARALGEERSGAGSDAEQGAESHEPHVEFAGNWPVELSAAESI VSTIAAGSSHMLVGSSNTVRYLANVPPTGCDVHASRGLAGIDGLISTGIGIAKAGQSQQL NNPSGAPHSRHVDPLAIVIGDVTALHDIGGLLLETGENLPPVQIFILNDDGGSIFAGLEH GQDHLAPYFDRFFATRHGRNFDHLATAYGWPYRYINTMSDLHAAVDGKQPGVYEVALTAG E >gi|294970754|gb|ADNU01000068.1| GENE 9 9433 - 9964 481 177 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396395|ref|ZP_06806558.1| ## NR: gi|295396395|ref|ZP_06806558.1| ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] # 44 177 1 134 135 203 100.0 4e-51 MNYPPSPYGSSVAPLAPAVHRNDKRRGWQLFLGTVLFFVAQTFMVIPVAVYAIATGKPDD IADMIGFSGRTPELLPTVLLCAGVACGIAVSMLGYMLIVSKVGGTPGNGLKGKRKFLEFI LGVVSGIVLIALAVGVIWALGGYSVTGIHTGPTLLPALLAAAAIGLGPGFMEEVLFR Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:07:41 2011 Seq name: gi|294970698|gb|ADNU01000069.1| Brevibacterium mcbrellneri ATCC 49030 contig00102, whole genome shotgun sequence Length of sequence - 54976 bp Number of predicted genes - 56, with homology - 55 Number of transcription units - 29, operones - 14 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 4 - 85 65.3 # Leu TAG 0 0 - Term 115 - 152 -1.0 1 1 Tu 1 . - CDS 204 - 674 612 ## COG1225 Peroxiredoxin 2 2 Op 1 . + CDS 749 - 1027 385 ## gi|295396398|ref|ZP_06806560.1| conserved hypothetical protein 3 2 Op 2 . + CDS 1032 - 1376 257 ## Krad_3755 chaperonin CPN10 + Term 1521 - 1588 16.7 + TRNA 1495 - 1567 79.1 # Lys CTT 0 0 + Prom 1493 - 1552 75.1 4 3 Tu 1 . + CDS 1678 - 1899 315 ## gi|295396400|ref|ZP_06806562.1| conserved hypothetical protein - Term 1916 - 1963 14.6 5 4 Tu 1 . - CDS 2035 - 2847 884 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 6 5 Tu 1 . + CDS 2975 - 3376 332 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Term 3417 - 3457 9.0 7 6 Op 1 39/0.000 - CDS 3493 - 4392 1283 ## COG0074 Succinyl-CoA synthetase, alpha subunit 8 6 Op 2 . - CDS 4413 - 5579 1561 ## COG0045 Succinyl-CoA synthetase, beta subunit 9 7 Op 1 . + CDS 5884 - 6372 465 ## COG1846 Transcriptional regulators 10 7 Op 2 . + CDS 6453 - 7169 680 ## gi|295396406|ref|ZP_06806568.1| conserved hypothetical protein 11 8 Op 1 . - CDS 7218 - 8798 634 ## COG2508 Regulator of polyketide synthase expression 12 8 Op 2 . - CDS 8795 - 9358 218 ## Noca_0098 hypothetical protein - Prom 9524 - 9583 2.0 - Term 9877 - 9923 11.8 13 9 Op 1 . - CDS 9948 - 11051 683 ## COG3535 Uncharacterized conserved protein 14 9 Op 2 5/0.000 - CDS 11058 - 12140 655 ## COG3535 Uncharacterized conserved protein 15 9 Op 3 1/0.222 - CDS 12137 - 13684 1065 ## COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit 16 9 Op 4 . - CDS 13684 - 15003 1060 ## COG1457 Purine-cytosine permease and related proteins - Prom 15252 - 15311 1.6 - Term 15075 - 15137 4.2 17 10 Tu 1 . - CDS 15345 - 15539 73 ## 18 11 Tu 1 . + CDS 15423 - 15692 70 ## gi|295396413|ref|ZP_06806575.1| conserved hypothetical protein 19 12 Tu 1 . + CDS 15908 - 17494 1352 ## COG1288 Predicted membrane protein + Term 17536 - 17571 -0.5 20 13 Op 1 . - CDS 17633 - 18094 370 ## gi|295396415|ref|ZP_06806577.1| conserved hypothetical protein 21 13 Op 2 . - CDS 18091 - 19197 846 ## COG1816 Adenosine deaminase 22 13 Op 3 . - CDS 19215 - 20381 1076 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 23 14 Tu 1 . - CDS 20509 - 21615 730 ## COG0836 Mannose-1-phosphate guanylyltransferase - Prom 21813 - 21872 2.8 + Prom 21659 - 21718 1.7 24 15 Op 1 24/0.000 + CDS 21850 - 22227 462 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 25 15 Op 2 22/0.000 + CDS 22233 - 22682 466 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 26 15 Op 3 36/0.000 + CDS 22714 - 24474 1868 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 27 15 Op 4 1/0.222 + CDS 24474 - 25268 776 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 28 15 Op 5 . + CDS 25270 - 26556 916 ## COG1686 D-alanyl-D-alanine carboxypeptidase 29 15 Op 6 . + CDS 26553 - 27173 376 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A + Term 27421 - 27458 4.0 30 16 Op 1 . - CDS 27163 - 28197 774 ## COG4850 Uncharacterized conserved protein 31 16 Op 2 . - CDS 28230 - 29234 843 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 29254 - 29313 2.4 + Prom 29275 - 29334 2.5 32 17 Op 1 . + CDS 29429 - 31666 2114 ## COG1966 Carbon starvation protein, predicted membrane protein 33 17 Op 2 . + CDS 31659 - 31862 121 ## gi|295396428|ref|ZP_06806590.1| conserved hypothetical protein + Term 31878 - 31932 20.4 - Term 31870 - 31915 14.3 34 18 Tu 1 . - CDS 31971 - 32789 622 ## COG0708 Exonuclease III + Prom 32737 - 32796 3.4 35 19 Tu 1 . + CDS 32894 - 33379 539 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 33400 - 33447 16.6 - Term 33383 - 33439 21.4 36 20 Op 1 2/0.000 - CDS 33520 - 34398 699 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 37 20 Op 2 . - CDS 34398 - 35681 1273 ## COG0112 Glycine/serine hydroxymethyltransferase 38 21 Tu 1 . - CDS 35850 - 37001 1040 ## COG1960 Acyl-CoA dehydrogenases - Prom 37021 - 37080 3.1 + Prom 36954 - 37013 2.4 39 22 Op 1 . + CDS 37100 - 38704 1305 ## COG1541 Coenzyme F390 synthetase 40 22 Op 2 . + CDS 38779 - 39267 485 ## Micau_2683 hypothetical protein 41 22 Op 3 . + CDS 39291 - 40439 693 ## Cfla_1139 hypothetical protein 42 23 Tu 1 . + CDS 40575 - 41504 641 ## Cfla_1140 hypothetical protein - Term 41554 - 41602 11.0 43 24 Op 1 50/0.000 - CDS 41613 - 42191 589 ## PROTEIN SUPPORTED gi|229821592|ref|YP_002883118.1| ribosomal protein L17 44 24 Op 2 32/0.000 - CDS 42213 - 43211 1193 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 45 24 Op 3 48/0.000 - CDS 43300 - 43701 615 ## PROTEIN SUPPORTED gi|62423122|ref|ZP_00378293.1| COG0100: Ribosomal protein S11 46 24 Op 4 . - CDS 43729 - 44097 592 ## PROTEIN SUPPORTED gi|62423123|ref|ZP_00378294.1| COG0099: Ribosomal protein S13 47 25 Op 1 . - CDS 44261 - 44374 178 ## PROTEIN SUPPORTED gi|116671489|ref|YP_832422.1| 50S ribosomal protein L36P 48 25 Op 2 . - CDS 44439 - 44660 338 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 - Prom 44822 - 44881 2.8 + Prom 44725 - 44784 2.0 49 26 Tu 1 . + CDS 44847 - 45845 622 ## gi|295396444|ref|ZP_06806606.1| conserved hypothetical protein + Term 45874 - 45918 14.5 50 27 Tu 1 . - CDS 45963 - 48026 2186 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 51 28 Op 1 . - CDS 48206 - 48667 333 ## gi|295396446|ref|ZP_06806608.1| possible heat shock protein 52 28 Op 2 . - CDS 48687 - 51488 2836 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 53 28 Op 3 12/0.000 - CDS 51577 - 52401 825 ## COG0024 Methionine aminopeptidase 54 28 Op 4 28/0.000 - CDS 52401 - 52964 759 ## COG0563 Adenylate kinase and related kinases 55 28 Op 5 . - CDS 52986 - 54287 874 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 - Prom 54382 - 54441 2.1 - Term 54291 - 54327 7.0 56 29 Tu 1 . - CDS 54451 - 54975 253 ## gi|295396451|ref|ZP_06806613.1| conserved hypothetical protein Predicted protein(s) >gi|294970698|gb|ADNU01000069.1| GENE 1 204 - 674 612 156 aa, chain - ## HITS:1 COG:MT2597 KEGG:ns NR:ns ## COG: MT2597 COG1225 # Protein_GI_number: 15842053 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Mycobacterium tuberculosis CDC1551 # 3 154 6 157 157 197 63.0 4e-51 MPRLEIGDVAPEFELLNAQGETVKLSDFAGSKVIVYFYPKAMTPGCTTQACDFRDNLEVL KGAGYQVVGISPDKPESLQKFADKEELNFTLLSDPDKKVLEEWGAFGEKKNYGKVVQGVI RSTVVVDESGKVELAKYNVKATGHVARILKDVGLAS >gi|294970698|gb|ADNU01000069.1| GENE 2 749 - 1027 385 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396398|ref|ZP_06806560.1| ## NR: gi|295396398|ref|ZP_06806560.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 92 1 92 92 155 100.0 8e-37 MSNVYTSNVTVDNANKDQLIESIRLREQRLAANIDELVGRVHPKALVAQATDSAKGIVVN RDGSPKVDRLALTGGIVLGTAALITFLATRKK >gi|294970698|gb|ADNU01000069.1| GENE 3 1032 - 1376 257 114 aa, chain + ## HITS:1 COG:no KEGG:Krad_3755 NR:ns ## KEGG: Krad_3755 # Name: not_defined # Def: chaperonin CPN10 # Organism: K.radiotolerans # Pathway: not_defined # 12 114 13 115 115 121 66.0 9e-27 MTDTQARSSNLDSVPVRMLHDRLLVEPDKESGERKSSAGIVIPATARVGRRLAWGTVVAA GPLVRQVSLGDSVLFDPEEQAEVELDARTLTLLRERDVHGIADQPDDSSTGLYL >gi|294970698|gb|ADNU01000069.1| GENE 4 1678 - 1899 315 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396400|ref|ZP_06806562.1| ## NR: gi|295396400|ref|ZP_06806562.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 73 1 73 73 107 100.0 4e-22 MTFSNTPRLLKVVIGSALLFLTAGFGFVVWSRNSEAGWISLGAVAIFALILGAGLALWAA IWLISLALKHRNN >gi|294970698|gb|ADNU01000069.1| GENE 5 2035 - 2847 884 270 aa, chain - ## HITS:1 COG:TM1724 KEGG:ns NR:ns ## COG: TM1724 COG1028 # Protein_GI_number: 15644471 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Thermotoga maritima # 3 249 6 244 246 104 29.0 1e-22 MSRIVVVTGAGSGIGKSTAEVLREQGHTVVGVDLKGADLDVDLSDPDAIARMVEQISETH GHVDAVVANAGTQSNTSLDLKVNYFGAVDTIKALAPLLAKSDNPRVAVTASGASLQPTDY SLVELLLAGDREKAVAYGDKLAESGPQVGYTNYSASKRAIATWVRKMAPTEEFAGRGIAI NAVAPGVVETPMTKELLASEEGRKLALGTMPAPLNGPVKPESIAHTLAFTVSAENRSMTG QILYVDGGFDSTEQGRGADIWHEPRHIDNV >gi|294970698|gb|ADNU01000069.1| GENE 6 2975 - 3376 332 133 aa, chain + ## HITS:1 COG:AF0987 KEGG:ns NR:ns ## COG: AF0987 COG0589 # Protein_GI_number: 11498592 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Archaeoglobus fulgidus # 1 129 1 130 130 57 31.0 8e-09 MTIIVGYVPKPQGRSAVDTAVQLAKDTGDTLFVVNAGVGEAVDDPLVASPQHLQELRDHL GTTGVPHEVHQFLRGNDPVEEILALEETLPDVRVIVIGTPRRSRVGKLFLGSIAQSIISQ ATAPVLCVKAPRK >gi|294970698|gb|ADNU01000069.1| GENE 7 3493 - 4392 1283 299 aa, chain - ## HITS:1 COG:MT0979 KEGG:ns NR:ns ## COG: MT0979 COG0074 # Protein_GI_number: 15840376 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 297 4 300 303 410 78.0 1e-114 MSIFLNSESKVIVQGITGGEGTKHTARMLAAGTKVVGGVNARKAGTKVSHKDKDGNDVEL PVFASVEEAMKETGADVSVAFVPPAFSKDAAFEAIDAGIGLLVIITEGIPVQDSAEIWAH ATAKGNKTRIIGPNCPGIISPEQSLAGIIPANITKRGKIGLVSKSGTLTYQLMYELRDIG FSTCIGIGGDPVIGTTHIDAIAAFQEDPDTEAIVMIGEIGGDAEERAAEFIKENVTKPVV GYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKKALEAAGVKVGKTPSETANLMREILGA >gi|294970698|gb|ADNU01000069.1| GENE 8 4413 - 5579 1561 388 aa, chain - ## HITS:1 COG:Cgl2512 KEGG:ns NR:ns ## COG: Cgl2512 COG0045 # Protein_GI_number: 19553762 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Corynebacterium glutamicum # 1 375 5 379 402 477 71.0 1e-134 MDLFEYQARDLFEKHGVPVLKAKVASTPEEAQKAAEELGGGTVVVKAQVKIGGRGKAGGV KLAHNPAEAKERAEEILGLDIKGHITHKVMIAEGADIAEEYYFSVLLDRANRTFLAMCSK EGGMDIETLAAERPEALAKVPVDAIDGIDEAKAKQIAVEAGFDAETAGLVTPVLQQLWTV FKEEDATLVEVNPLVKTGDNTILALDGKVSLDDNASFRHEEHEELRDIQAEDPLELKAKK LDLNYVKLDGEVGVIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEVMANGL DVILGDDQVKSVFVNVFGGITACDQVANGIVKALEILGDNATKPLVVRLDGNAVEEGREI LAKANHPLVTTVDSMDGGADKAAELAAK >gi|294970698|gb|ADNU01000069.1| GENE 9 5884 - 6372 465 162 aa, chain + ## HITS:1 COG:AGc466 KEGG:ns NR:ns ## COG: AGc466 COG1846 # Protein_GI_number: 15887622 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 159 8 166 168 126 45.0 1e-29 MDEVDLIVSAWERERPDLDVTPMEVLSRVSRLARQLDLARKETFAAHGLEVWAFDVLSAL RRAGEPYELSPSTLVNEMMVTSGTMTNRIDRLVSRGLVSRHPDPHDRRGVHVRLTTSGRT KVDTALAELLEHEHALLSNLSAAQKRKLAELLRSLSTGFSPA >gi|294970698|gb|ADNU01000069.1| GENE 10 6453 - 7169 680 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396406|ref|ZP_06806568.1| ## NR: gi|295396406|ref|ZP_06806568.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 238 1 238 238 405 100.0 1e-111 MIRPQTLATSALVATVVATLSACAVNPTERPGTSYATGSPEPVPSISAPADAPELTVVDA SPGGSRKNDPLWDTLAKAAGDKKPVYVDVVVHTGAEVPDSDRATLTPDTPDSVSVTVDRD VVSDSSPGFHRIRGTFEAEQLGDSAFELSTKSTDEIPGLIPKNKELKKECSDPEGADRIG AAAEKLAGDPDAREDLRKTWISAPELWWAIQQSAVLMRETDGETEGDFFFQACESVQS >gi|294970698|gb|ADNU01000069.1| GENE 11 7218 - 8798 634 526 aa, chain - ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 320 513 338 527 531 62 27.0 2e-09 MIDLEVTLGHPSAPEAQIVTTHSKVIIHDAVGVCLRHDVPYLYSVVDGISAQKKIYSGVL LVLLANDVNIDWRLDVLVREAALANVAAIAIDPEQESLPASVVSLAHRLGITLIVCREPA ELYRHFLATLSDDWNTRRTSVKEILSLVATVSSLDEALSELERLLGVAVYLFDPTGFEVS ERISTREFEHISSFDRLPDVGMGKTAIGSGQTLFTVPINTDMPKPFRLGIVASNPSKSDV STLSGLMNAAALVCAHVIMRSRLVDKSGAVERRRLIEELLHSDPDNPRAEIRRRIADIGW DVSDTQSVARIACSPAVDVVAATRFVKMAFEHQGVTVNIAEVDDGWFVWPHSTAHVARRD WEKLVRTAIGEIRERIAASCGISATGNGLGEFIRSLSRAADAARIAWNRPQSGYVAVADK LGLDQLLLSWTSADKFAYTAGEFLKQLENSGRDLTKTLLAYLDAESSITETAAVLGIHRN TVSERIKRIESVLDVSLDDPETRLALHLATRAELRFGSLDASGFYA >gi|294970698|gb|ADNU01000069.1| GENE 12 8795 - 9358 218 187 aa, chain - ## HITS:1 COG:no KEGG:Noca_0098 NR:ns ## KEGG: Noca_0098 # Name: not_defined # Def: hypothetical protein # Organism: Nocardioides_JS614 # Pathway: not_defined # 7 178 186 347 358 65 33.0 8e-10 MLGFGCGWMVLAIAPASSPFQTTDVVHGQLSVARRIGHEMMQTGYGLKDRHDLSHVGVKI LGEGRITENAHYGVKDPQSRFAGQGSRNVRSFTLHDQRSETVLRVEATNEFLLVLVDGEL VVAAPDIISLQDVHTGVLCSPQEVRHGMVVRVMTSPYPYERIAGKRDVERLQLSAYGLAE REQVFKA >gi|294970698|gb|ADNU01000069.1| GENE 13 9948 - 11051 683 367 aa, chain - ## HITS:1 COG:lin0474 KEGG:ns NR:ns ## COG: lin0474 COG3535 # Protein_GI_number: 16799550 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 5 361 4 356 366 307 45.0 3e-83 MAWTLDIEHLEDLARGAAFLGTGGGGDPYIGRLLVEQAIEKNGPITILDPEELDDDVCVI PTAQMGAPSVIMERIPAGNECELSLKALEEHLGRKADATMPIECGGINSMIPLLVGAQKR MPVVDADGMGRAFPELQMETFAVYGVSGSPLAIGDERGHSVIIDAKTDNKRMEDLARAMT VQLGGASHIAEYAMTGEEVKRTAVPRTLSLALAAGRALRESHARRSDPVEMLQTAFSTTL YSHVRELYVGKIVDVERRVESGFTRGRARIQSDGASPMEIEFQNENLIAKAGDTILASVP DLICVIEGDTFEPITTERLRYGQRVRVVGVSTPEMMRTPEALAVFGPQGFGLDVDFIPVE ERAGQSS >gi|294970698|gb|ADNU01000069.1| GENE 14 11058 - 12140 655 360 aa, chain - ## HITS:1 COG:lin0474 KEGG:ns NR:ns ## COG: lin0474 COG3535 # Protein_GI_number: 16799550 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 10 352 4 350 366 331 46.0 1e-90 MSNTNTLTVIDEATCRDIAVGAAILGTGGGGDPYVGMLMAEQAIREYGPVEVISLDSLED TDAVYPVAMMGAPTVMVEKTPSIQQFRNVVEASASYLDRPATHLACIEVGGVNSMIPIAA AAQMGLPLVDGDGMGRAFPELQMVLPTINGIAATPLSLADEKGNTAVIDTVTNKWAERIA RSATIEMGCTAIVSNYPMTGKQTAESFVSGTLSLCAELGREITRLRHAAGSAVDSIVSTL NGVNIASGKVIDVERRTTAGFAHGRARVECPEGELVLGFQNEHLVAKLRDEYVVTTPDLI MVVDTDTGEPITTEQLRFGNRVTVLAAPADERWHTNEGLEIAGPRYFGYDTDPIRPDWNR >gi|294970698|gb|ADNU01000069.1| GENE 15 12137 - 13684 1065 515 aa, chain - ## HITS:1 COG:mll9131 KEGG:ns NR:ns ## COG: mll9131 COG0145 # Protein_GI_number: 13488078 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase A/acetone carboxylase, beta subunit # Organism: Mesorhizobium loti # 1 511 2 514 515 508 55.0 1e-143 MRIGIDVGGTNTDAVLMDGSTVLAGIKQNTMEDVTEGIIAALSALQNKHSFDPSEVNAIM VGTTHFINALVEARQLAPTAAIRLGLPATASLPPFVGWPDRLVEAVKGRSYLAHGGHEFD GRLISPIDKDELRRAASDMSEHGVQSVAISSVFSPINDELEQAAKEVIRGELGPEVSISL SSEIGRMGLLERENATIINAALRELADSIIGGLTKRLATSGYNCNLYLSQNDGTLMDVED ARRYPVATFASGPTNSMRGAAVTSGLSTCAVVDVGGTTSDVGVLTNGFPREATTEVTVAG IRTNFRMPDVLSIGIGGGSLVNGAEVGPESVGYQLNPKALVFGGSTLTATDIAVASGRAE IGDPDKVAHLETSMVNAVLERISERIADTVDRMRTTPDPLPVVAVGGGAFLLPDSLGELG EVLRPENAGVANAIGAAIAQVSGEIDRVYSIKDGQRDSVIEEAQEEARVRAIEAGATPGS VSIVEFDEVPIPYLPGNSTRVRVKAVGDLPVEGTK >gi|294970698|gb|ADNU01000069.1| GENE 16 13684 - 15003 1060 439 aa, chain - ## HITS:1 COG:BH1882 KEGG:ns NR:ns ## COG: BH1882 COG1457 # Protein_GI_number: 15614445 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus halodurans # 8 420 10 427 445 153 31.0 7e-37 MGERKISVDDYALARVPASARYGWFSVAVQRFGQVSALTQFILGATIGYGMTFWQSLLAF TLGAVILEVLAIFVGIIGMREGLSTSVVTRWTGFGTIGSSLIGLAIGVSLVGWFGIQTAV AADSLAAILSFWPSWAWAIFFGLAVTAIVLRGFSSMQWIANLTVPMFLVLVGWAIVVELL NHPLSELVWSPPPGPQLGMVEATTLVAGGFIVGAVITPDMTRFNRSVGDVVKQTLVGVTL GEYVIGMAGVLLAHAVKTADISHIVVSSVGWVGVLIIVLGTFKINDWNLYSSGLGVVNFI DTTFGKKLNRALVTATIGVIGTALAVAGILERFTDFLTVLGVVFPPIAGIMVAEYFVVKK FRPELDSAGESIPDTAPRWVFATLVIWLASSVFGYFVQFGMPSINSVVLAFVLYVLAGKL GFVRGTGVQKIEVNKKGNI >gi|294970698|gb|ADNU01000069.1| GENE 17 15345 - 15539 73 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGHSYRLLPIPAQSDQFNLLKLHLNVLNCSSGLHFTVHSERMCKLGQTVTVVRAGVLCF VFLA >gi|294970698|gb|ADNU01000069.1| GENE 18 15423 - 15692 70 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396413|ref|ZP_06806575.1| ## NR: gi|295396413|ref|ZP_06806575.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 89 1 89 89 180 100.0 3e-44 MHGKVQTTGTVENVQVKFEQVELITLSWDWKESVTVAEHAFSSSRAFPANAHDIQLPHLD VVAARKPLDRAGPCMCAVLSNSFGFGRHA >gi|294970698|gb|ADNU01000069.1| GENE 19 15908 - 17494 1352 528 aa, chain + ## HITS:1 COG:BH2308 KEGG:ns NR:ns ## COG: BH2308 COG1288 # Protein_GI_number: 15614871 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 69 523 16 467 470 164 25.0 4e-40 MPKNTQLNESDFSSTTTINPDDKQPTSSTETQETHPNPATPEDTSGSPDTPAGSDTSAHP ATSTDTPAKRFQMPHLLWLMLIILGLVVLASYFIPAGQFEEGPDGSIDPDSFSFLSQQTP VSPLDALMLLLSGAVKMAPIAFAVLMVGANVHVVLESKAFENLLNATVYRLQDKSTPLLI SGLFCLMVYLGGFSGSDALIAIVPIGVLFARKLGLDGIVAISVTTFAALIGFGTGPKHMA ITQMMIGLPPYSGFGVRLLIMNGFMLVGLVFVLRYVNKIQRDPTRSPMWKHGWRPLAQDD DSTVAAETLRFRSVMVIALFLLQFGAIIAYSLLIDSKRTIDAMFAVNLVSAIVIGKVAGF KWNQLAESIVRGLQSMAFVSVIIGMAGAISIILQEAHVIDTIVYTITRPLHGVGLGWSAV LMVLLFAVINFIIPSTAAKAAILIPLLAPIATALGMHHQIALQAFQLGDGFTNLLSPVLA WLVGSCVTAGVPYLTWVRWVAPKVGVFLVLSAALMLGLTALGWTGGVA >gi|294970698|gb|ADNU01000069.1| GENE 20 17633 - 18094 370 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396415|ref|ZP_06806577.1| ## NR: gi|295396415|ref|ZP_06806577.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 18 153 1 136 136 219 99.0 4e-56 MTQTNSVPPRPSTLWIALGALSLEALALVGAGVWAVALAVSAQEEVTSLLALGAMFVVFG ALMVGVMFGVSRGVRWARPASVAWQVLQLISGFAIVGQDFRVGGPAIVLAVATLVGLFAP PTLTWYEARLLEHEAREEERLKGLQQESLKKRR >gi|294970698|gb|ADNU01000069.1| GENE 21 18091 - 19197 846 368 aa, chain - ## HITS:1 COG:ML0700 KEGG:ns NR:ns ## COG: ML0700 COG1816 # Protein_GI_number: 15827296 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Mycobacterium leprae # 8 364 3 358 362 317 50.0 2e-86 MDTNLFPTPVGVDDRDPILELPKVSLHDHLDGGLRASTLIELAQEAGVEIPSGDPSDMRA RILGASNSGSLERYLESFALTVSVMQTADALKRVAREWVLDQAADGVFYAEARWAPEQHV QGDLDMDAAVAAVQAGLDEGTAIVAEAGKFIRVGQILTAMRHAKNSVAVAELALRHRDGG VVGFDLAGAEEGNPPSKHLTACETLHAACFPLTIHAGEGAGVDSIFEAVQVCHTQRIGHG VRIVEDMDIVDGQGTLGELSSWILDRQIPLELSPTSNVHTGAADSIETHPITGLKDLGFA VTVNPDNRLMSGTSVSKEMRLLVDRAGWDQTDLEWVTVNALNAAFLPLDVRERLLDELVI PGFARIEL >gi|294970698|gb|ADNU01000069.1| GENE 22 19215 - 20381 1076 388 aa, chain - ## HITS:1 COG:Cgl0667 KEGG:ns NR:ns ## COG: Cgl0667 COG1473 # Protein_GI_number: 19551917 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 11 376 16 376 394 340 49.0 2e-93 MIQSVVNELVDELIEFRRDIHAHPELSNVEHRTTEKIAQRLRDAGLEPVLFEGTGLYVDV GEGPIVGGLRADIDALPLDDLTRTDFASTVPGVSHSCGHDVHLTAAMGAALALSRIHETK GGLGGTIRCIFQPAEEVTPGGALQIIQQGALTGVPLCYALHCDPNVDVGKVGSRIGPITA AGDTVILRLRGHGGHTSRPHLTEDLVYALGRLAVDLPSTLSRLIDPRHAFSLVWGAVEAG HAPNVVPNEGSLMGTLRCLDVDGWNKVAQVLPDLVDRIAGPYGVEVELEHRRGVPPVVNT EEEVTLAEHAIRQELGPDSVELTPQSMGGEDFAWYLTRVPGALIRLGTRTPGGHTYDIHQ GDFLVDERAVGIATRVNCAVALEVLNRA >gi|294970698|gb|ADNU01000069.1| GENE 23 20509 - 21615 730 368 aa, chain - ## HITS:1 COG:DRA0032 KEGG:ns NR:ns ## COG: DRA0032 COG0836 # Protein_GI_number: 15807702 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Deinococcus radiodurans # 2 360 11 363 372 249 42.0 7e-66 MIPNFHVVIPAGGAGTRLWPLSRRDRPKFLHDILGVGSTLLQSTWSRTVPLVDPDHMWVV TGQAHAEEVSQQLPDLREDRLVREPSPRDSAAAIGLAAALIHRTDPDAVIGSFSADHSIT NAEDFRTVVTQAVAAASGGDIVTVGITPTYASTAYGYIEAGANLGLHAAPTARRALNFVE KPDATTARKYTFSGRYRWNAGMFIARTDAMLELFAQHAPDLYAGLEKIAEVWGTDRQEAV LAEVWPQLEKVAIDYVIAEPAARAGRVVVVPGDFGWDDVGDFDAVAKLRQPAPGERCAVK VIGDSPVVAEDSSGVVISTGDRPVALVGLDDVVVVDTDDALLVTSRNSAQKVKSVVARLE DQGLNQIL >gi|294970698|gb|ADNU01000069.1| GENE 24 21850 - 22227 462 125 aa, chain + ## HITS:1 COG:ML0699 KEGG:ns NR:ns ## COG: ML0699 COG2009 # Protein_GI_number: 15827295 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Mycobacterium leprae # 8 112 28 132 153 127 56.0 4e-30 MAKASTGTLYRGHEGMWSWVAHRVTGVGIFFFLLVHVLDTALVRVSPAAYDAVIGTYKTP IMAMAEIGLVAAIIFHAFNGVRVILVDFWKGGPKNQRKMFWAVMILWLIVMIAFVPRHLM HTFGG >gi|294970698|gb|ADNU01000069.1| GENE 25 22233 - 22682 466 149 aa, chain + ## HITS:1 COG:ML0698 KEGG:ns NR:ns ## COG: ML0698 COG2142 # Protein_GI_number: 15827294 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Mycobacterium leprae # 5 133 34 160 163 128 49.0 3e-30 MTATSIPAPRSEYTRHKNTRSKFELAAWLFMRVSGLILVILIFGHLFVNLWQGEGVQGLD FGFVAGKWASPFWQIWDLAMLWLAMLHGTNGMRTIINDYAEKPGTNVVLQLVLYIASAIV VVLGTLVIFTFDPCPVNTSAELLPTFCTA >gi|294970698|gb|ADNU01000069.1| GENE 26 22714 - 24474 1868 586 aa, chain + ## HITS:1 COG:MT3419 KEGG:ns NR:ns ## COG: MT3419 COG1053 # Protein_GI_number: 15842910 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 586 5 590 590 841 72.0 0 MQVHEYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED NWEWHTFDTIKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT RDHGKSPVRRACYAADRTGHMILQTLYQNCVKHGVEFYNEFYVLDLVMTEVDGQRRPAGV VAYELATGEIHVFRAKAVVFATGGFGKVFKTTSNAHTLTGDGVAVTYRNGLPLEDMEFFQ FHPTGLAGLGILLSEAARGEGAVLRNSEGERFMERYAPTIKDLAPRDIVARSMANEVREG RGCGPNKDYVLLDLTHLEPAHIDAKLPDITEFARTYLGVEPYTEPVPVFPTAHYAMGGIP TNVESEVLADNDTVVPGLYAAGECACVSVHGSNRLGTNSLLDINVFGKRAGIAAAEYSKT ASLPELPDGAADRTVDMIETMRRSNGSELIGAIRKDLQETMDTHVQVFRTEETLRTALKD IEALRERYKNVGIHDRGKRYNLDLLEAIELGFLLEIAEVVTVAALHRKESRGGHFREDFP KRDDENFMHHTMTYRDESATAEGVAGMRLETKPVVITRYQPMERKY >gi|294970698|gb|ADNU01000069.1| GENE 27 24474 - 25268 776 264 aa, chain + ## HITS:1 COG:MT3420 KEGG:ns NR:ns ## COG: MT3420 COG0479 # Protein_GI_number: 15842911 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Mycobacterium tuberculosis CDC1551 # 34 260 25 260 263 330 66.0 2e-90 MSEKEVKTAEPASKVDLPEHLGGGGGEIPSFDCTIRIARFNPEADSEPHWEDYKVTMYGT DRILDALHKIKWEIDGSLSFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDTNKPITVE AIKGLPLEKDLIVDMEPFFQSYREIMPFLITSGHEPTRERLQSPEDRAIFDDTTKCILCA SCTSSCPVFWTDGQYFGPAAIVNAHRFIFDSRDEGGDMRLEVLNDKEGVWRCRTTFNCTE ACPRGIEVTKAIAEVKQALLTRAF >gi|294970698|gb|ADNU01000069.1| GENE 28 25270 - 26556 916 428 aa, chain + ## HITS:1 COG:MT3433 KEGG:ns NR:ns ## COG: MT3433 COG1686 # Protein_GI_number: 15842925 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 61 337 84 356 405 137 35.0 4e-32 MALHPLTCGRRFLAAATVALATFSVVGPTNVVGTEPASAHTVVAQPAETTSATYTSPTDL GDGTSPPKPAADAWLVANLDTGEVLVSHGEDVVSSPASVQKLLTALALVDELPDVKKKHR ISEADTQVDGTRVGLLRDNEYSIDLLFRSMLMSSANDSAYALGEAVGGQHKALELMHRKA RQLGMDSTVVGTTSGLDAPGQGTTIDDLLRLAHEFTKNKYLMKVVQTQTLDFPGGYDHDK KKKVKGYQIQNHTRLIGLVEGAIGLKNGYTQEARGSFLGAATRGDTTYAAVVLRAQTQSR QAAADLLNWAFNQTDPKVTRTVAFEDLSTPSPVASPAASAGTSDSGAESSSSDARSGTES DISVEEMRESQPAGAAIPANIGLALGLPVAVFAVAGGILMYRSRHSRSGNSRSRRGEEAR EDQEGTGR >gi|294970698|gb|ADNU01000069.1| GENE 29 26553 - 27173 376 206 aa, chain + ## HITS:1 COG:Cgl1169 KEGG:ns NR:ns ## COG: Cgl1169 COG0746 # Protein_GI_number: 19552419 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Corynebacterium glutamicum # 12 195 1 179 187 69 32.0 4e-12 MSQGSRTEEPSLTALLVSGGKATRLGGITKTALTANGVPLIKRALSAVRGVSPHCPAVVV GDTDGLDDLGHVTHLRENPPFSGPAAAIAAGVEHVTTDLVAVLAADLPLIDAHTIRALID AVGQADCAVAVDPTGRVQYLTAVWRTRALAQVVSAAEVAHRPARTLYEHCEWVPIHLEQA TTADIDTYADAQRFGVDLRGASTPRQ >gi|294970698|gb|ADNU01000069.1| GENE 30 27163 - 28197 774 344 aa, chain - ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 33 336 22 337 344 256 42.0 6e-68 MAKKYKPNNIAPEVIHTAARLEDKVQDWQRKQATKRGWKRTVIAYDSYGTESFIRVLARI VLTKTGQPAADMHASIRGFRSFGSIPLNEATAWVRVNGQEHMVASDRGGIVDAVIPGDFE PGKVELEIWTQGSLVDTATAHVVADDEKFGIISDIDDTVMVTALPRPFLAAWNTFVLDEH ARSPVAGMSVLYDRLTYLRPHAPIIYLSTGAWNVALTLKRFLSRNLYPDGPFLLTDWGPT ATRAFRSGQEHKRIQLERLAREFPNIKWLLVGDDGQHDEDIYGEFVENHPNNVVAVCIRQ LTVGEAVWAGGRSKNSGRGQGVPWIYASDGAGLMEKMNDRGIIV >gi|294970698|gb|ADNU01000069.1| GENE 31 28230 - 29234 843 334 aa, chain - ## HITS:1 COG:Cgl0657 KEGG:ns NR:ns ## COG: Cgl0657 COG0180 # Protein_GI_number: 19551907 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 4 334 9 341 345 403 60.0 1e-112 MSQSAVTRPRSLSGVQATSGSLHLGNYIGALQQFVAQQETHDAFFFIANMHAITVEQNPE ELRERTLRTAAQFIAAGLDPEKSTIFVQSHVDAHTKLSWILECTTSLGEAQRMTQFKDKS AKNEHVSLGLLTYPALMAADILLYQADVVPVGEDQRQHLELTRNLAERFNNRYGETFKVP EAGILKQTAKIYDLQDPSAKMSKSGKNPAGRIDILDEPKVLQKKFKSAVTDNDTVIAYDP DNKPGVSNLLTIYSSLSGQSIDSIVAEFDGKMYGHLKVALADLAVEALTPVRTRTNELLE DRAELQRILLNGAHKATQIADVTVKNAYDRVGFL >gi|294970698|gb|ADNU01000069.1| GENE 32 29429 - 31666 2114 745 aa, chain + ## HITS:1 COG:Cgl0635 KEGG:ns NR:ns ## COG: Cgl0635 COG1966 # Protein_GI_number: 19551885 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Corynebacterium glutamicum # 14 731 23 745 759 815 62.0 0 MSVEYIKTDEALPPVAVEEKPRWTPGKIVLWVAIALIAGIGWTMIAIVRGEQLSASWFVA AAVGSYLIAFRFYAKFIEWKVCRPDPKRATPAELNDNGRDFTPTDRRVLFGHHFAAISGA GPLVGPILAAQMGYLPGTLWIVLGVIVAGAVQDYMVLYFSTRRNGRSLGQMARDELGKVG GIITSIGIILIMTILIAVLGVVIINALAESPWGVFSIAMTIPIAFFMGFYMRYLRPGAIV ETSVIGVTLLVLSIVVGGWVHNDPLWSEVFHLTKVQLAWGLMIYGFFAAVLPVWMLLAPR DYLSTFMKIGTIGLLAVGIILVNPEVQMPAVTPFASNDQGPAFAGSLFPFLFITIACGAL SGFHALISSGTTPKLLEKESQARLIGYGGMLMESFVAIMALVAAVSLDKGIYFAMNAAEP LTGGTPQGAADFITNKLGMPGIDVTPEALEQAAHDVGEASIVSRTGGAPTLAMGMAHILH NVFGGPAWMSFWYHFAVMFEALFILTTIDAGTRVARFMLSDLLGNFMPKFRDPSWNLGAW LTTLVMVAGWGSILVIGVTDPLGGINTLFPLFGIANQLLAAVALAVVLAIVVKSGYAKYA WIPGIPLAWDLAVTMTASYQKIFSTNPKLGYWAQHFAVREKLAAGETSMGNINGAEAMNA VVRNTFIQGTLSIVFAVLVLMVVLMALYQCFKAVTTGKVSTSEEPAVPTKIFAPKGLIPT KAEREVQAQWDAFQKEHAQKVKAND >gi|294970698|gb|ADNU01000069.1| GENE 33 31659 - 31862 121 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396428|ref|ZP_06806590.1| ## NR: gi|295396428|ref|ZP_06806590.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 67 1 67 67 133 100.0 3e-30 MTKVSTLLKPLKAVHWYIKEIMGENAYKHYLESYQQRHGTCEGAMGEREFWRDLTDEQDR NPKARCC >gi|294970698|gb|ADNU01000069.1| GENE 34 31971 - 32789 622 272 aa, chain - ## HITS:1 COG:Cgl0651 KEGG:ns NR:ns ## COG: Cgl0651 COG0708 # Protein_GI_number: 19551901 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Corynebacterium glutamicum # 4 263 5 303 304 213 42.0 3e-55 MITVASVNVNGIRAAMRKGMEPWFNQNTPQILTLQEVRAANDIAYSVMEPFGGSAYSADA EAKGRAGVAVVSQTPAREVRIGIGDEYFAGAGRWIECDYDLDDGSTLTVVSAYVHSGEAG TPKQDDKYRFLDRMKERLPQLARHADYALVTGDLNVGHTELDIKNWKANQKKAGFLPEER AYFDEFFGDLGWIDVHRKLSGEVPGPYTWWSMRGKAFDNDAGWRIDYHMATPNLAELASN AQVHRAASWGERWSDHAPLVIDYDLPELVDNK >gi|294970698|gb|ADNU01000069.1| GENE 35 32894 - 33379 539 161 aa, chain + ## HITS:1 COG:BS_yqjY KEGG:ns NR:ns ## COG: BS_yqjY COG0454 # Protein_GI_number: 16079426 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 34 154 20 152 156 79 32.0 2e-15 MATPEFDIERLTVSPLDEVDAQDLRTFLVDEQQKFWGERDLSEDHDPYWFRQLAASGLVA RYKNEIVGYLLGVIPLDGPAYIHLVAARDDFRHQGIGRRLYDSFIELARSKGKTEVQATT MPENSAAVSFHSSIGFESVLMDNYAGKDKARILFKLTLALQ >gi|294970698|gb|ADNU01000069.1| GENE 36 33520 - 34398 699 292 aa, chain - ## HITS:1 COG:Rv3356c KEGG:ns NR:ns ## COG: Rv3356c COG0190 # Protein_GI_number: 15610492 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Mycobacterium tuberculosis H37Rv # 4 289 5 280 281 290 56.0 2e-78 MPQILDGKATAKALKQEFAERVARLREHGVTPGLGTLLVGEDPGSQWYVAGKHRDCAEVG IESIREDLPETATQQEIEDAVQRLNDNPACTGFIVQLPLPKGIDTNRVLELIDPDKDADG LHPMNLGRLVLRVGEDVESSLPCTPVGIVELLERHGVDLNGKHVVVLGRGVTVGRPIGLI LTRRAVNATVTLTHTGTTNLKELLQQADVVVAAAGVKDIVDGDSVKDGVVLVDVGVSRET DPETGKSRVVGDVSEKARAKSSFYSPNPGGVGPMTRVELLRNVIESAERSLA >gi|294970698|gb|ADNU01000069.1| GENE 37 34398 - 35681 1273 427 aa, chain - ## HITS:1 COG:Cgl0969 KEGG:ns NR:ns ## COG: Cgl0969 COG0112 # Protein_GI_number: 19552219 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Corynebacterium glutamicum # 10 427 13 431 434 607 71.0 1e-173 MSSVPSILSESLEQVDPEIAQVLNDELQRQRDTLEMIASENFVPKAILQTQGSVLTNKYA EGYPGRRYYGGCEHVDVAENLAIDRVKELFGANFANVQPHSGAQANAAVMHALARPGDTL MGMSLAHGGHLTHGMKINFSGRLYDIAAYGVDEATNRLDMDKVRKTALESKPKVIVAGWS AYPRHLDFEAFREIADEVGAKLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLSGPR SGLILSRDEDIAKKINSAVFPGQQGGPLMHVVAAKAIAFKIAQSAEFKEKQERTIRGAKI VAERLLQDDVTDAGVSVLTEGTDVHLVLVDLRNSALNGQEAEDLLHSVGITVNRNAVPFD PRPPMVTSGLRVGTPALASRGFGHEEFTEVADIMAQVLKPGCDLDEQRQRVNRLTQAFPL YEGLKQY >gi|294970698|gb|ADNU01000069.1| GENE 38 35850 - 37001 1040 383 aa, chain - ## HITS:1 COG:AGpT133 KEGG:ns NR:ns ## COG: AGpT133 COG1960 # Protein_GI_number: 16119880 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 379 16 391 401 242 39.0 7e-64 MTDILSLQLLDTLRERAPRYDANNEFCFEDMEDLRAADYLTMLVPESFGGAGMSVAEVSR VQRTLAQAAPATALAFNMHQIIVGLCARLHRAGDTTTDWVLRDAMDGHIFAFGISEAGND SVLFDSSTEAVPTDDGYELTGTKIFTSLSPVWTRLVVHARVKDSDQLVFGFIDRDSEGIE IKDDWDTLGMRATQSCTTVLNNVLLSSDRVATHTPVGPNDDPFVFGIFGCFELFLGSVYN GIGERAVSLASEIVQKRMSRAKGAPYSKDPDIRWQIASAAILMDGASLQLEKLTEDFDLV GTDRDPNYGMKWFLHFSAAKNRSAEAAKSAVDTALRVCGGSQYYSRSELQRLYRDVLAGI YQPSDNESLHSAYSNALLGPIED >gi|294970698|gb|ADNU01000069.1| GENE 39 37100 - 38704 1305 534 aa, chain + ## HITS:1 COG:all2410 KEGG:ns NR:ns ## COG: all2410 COG1541 # Protein_GI_number: 17229902 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Nostoc sp. PCC 7120 # 77 494 49 470 505 147 29.0 5e-35 MSEKRPALRKPVIKRGPVNIARQTLLRLTNMGLTTAYKAYRVHPAIWRLTARNYQPGLER IARLNAWMICQQASLDVPAYQDYLVENDYEFTWWNLQNYPATNKHDYVTQYSEDERCWNG SIETVGTVVDESSGSSGKPFNWMRSKKELDTVHRNVAGYVTFLFGSRDLFCINAFSMGAW ATGTNTGLAMAKVAMVKNTGPDLEKIIDTLTHFGPGHTYLISAYPPFLKHLVDYMDNDTE RGPEYWDQFTLNGFVGGEAMTEGLREHVEKRFNRVYSGYGASDLTIGMAGETDVAVEIRK ELTRNADFRAALLGEDESRVPMIFQYNPLETFLETTEDNELIVTINSAAVMSPRLRYNIG DEATLMSFDDMVNITRAFPHLAKRLSEAFKRQGMRLPFVLLFGRSDSTISYMGANIYPLD VENGLYRDERYAPLIDSFRIELQDTGALEMRPTLHIQLRDTSAAENLDADQREQMRTALT AGVLEHLSAVSRDFKQSLEEDPSAADIRVELHDHGTGPFAEATKKIKNTYLMKS >gi|294970698|gb|ADNU01000069.1| GENE 40 38779 - 39267 485 162 aa, chain + ## HITS:1 COG:no KEGG:Micau_2683 NR:ns ## KEGG: Micau_2683 # Name: not_defined # Def: hypothetical protein # Organism: M.aurantiaca # Pathway: not_defined # 1 141 1 139 146 121 44.0 1e-26 MRTRDFSATPPQGQGNALFLGCNEYRSVLDMADQVRRWTKLARTLKRAPGYLWHRSYYEF PKRIGLVVVFQSLDDLMRFARTQEHHEIMHWLVGKGDKSPAKGGFIRIYEANEWGYSNGI FRAEDGRTGMIDRFTQLPGESATSSTQLPGAATSPSTRTDLP >gi|294970698|gb|ADNU01000069.1| GENE 41 39291 - 40439 693 382 aa, chain + ## HITS:1 COG:no KEGG:Cfla_1139 NR:ns ## KEGG: Cfla_1139 # Name: not_defined # Def: hypothetical protein # Organism: C.flavigena # Pathway: not_defined # 3 378 5 365 380 241 42.0 3e-62 MITVEQVETRAQLREFCAVPAWMTPAEVASRVPLLRSDVVAWHRGRSWFPGPVTLLLARD AHGTVVGRCTVHSHADMDAKLGFPTLLFGALEFAHRDAFEALMATVDEHAARTGKTHIMG PVSLLPNETGGVVVAGHEHPGFFDSAWNSPLVSHAFETSGFTPFSGGRTWEVDLGKVPAK RATAPAPQAFAEVGVELLSPGRLGVRKVLNRVLPTLNEAFDPLPYYTPISAEQFASQTSG LELLMDPGLIVAAQEMGAEESTPVAGFILTVPDPVEHLRATNGALSPTFAARLLRERLSR QRLTTSAKDAVLIIQGSRPSVQGRGVVSILARQMFSTLIKKNYRRLRITFIGEDNPGSEA IPRRAGGHPLHDILFFLRKVHT >gi|294970698|gb|ADNU01000069.1| GENE 42 40575 - 41504 641 309 aa, chain + ## HITS:1 COG:no KEGG:Cfla_1140 NR:ns ## KEGG: Cfla_1140 # Name: not_defined # Def: hypothetical protein # Organism: C.flavigena # Pathway: not_defined # 2 306 54 359 382 78 30.0 4e-13 MDLGLSLGCWVEAANIALGATSACIEDVRVLGEEHGIWLELDVAEVGPGASGSGSSGGPT LSASNLETDSGASFKPAEVLDRQVDRGKLLPRTDRLEEALTQFAKTNFAYTSDPIASAQI PEATWSAASRYAQAAALSPREALDETLKWLRLDDTDPRYYQDGLTAETLRIPRAVARTGA RLVKGGSDTLLNAVSRTGVWSTMLPTFTSRRAPDRVVLALHRDHASQVSAEEWLQAGRDL LRLWLILARHGLRVAVESQLKDTPLSAAMLCDVLRRTDPHGSFVPFAVFSVGESAGEVPK SHRLVEQES >gi|294970698|gb|ADNU01000069.1| GENE 43 41613 - 42191 589 192 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229821592|ref|YP_002883118.1| ribosomal protein L17 [Beutenbergia cavernae DSM 12333] # 1 191 1 193 197 231 63 7e-60 MPTPTKGTRLGGSPAHERAMLNNLAAQLFENKSVTTTVTKAKRLRPVAERLITFAKRGDL ASRRRVLASISDKGIVHELFTSIAPAVAERPGGYTRITKIGPRRGDNAPMAVIELVLETY SPKQKAVKEAEAVAETAAAEEADVAEEKVDEAAEAKAEAPADVDSGAQEDEAQAVADDAA EEADEKAEEETK >gi|294970698|gb|ADNU01000069.1| GENE 44 42213 - 43211 1193 332 aa, chain - ## HITS:1 COG:MT3564 KEGG:ns NR:ns ## COG: MT3564 COG0202 # Protein_GI_number: 15843052 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 315 1 315 347 487 80.0 1e-137 MLIAQRPTLNEEVVSDYRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL HEFSTVPGVKEDVTEFILNLKSLVVSSEFDEPVVAYLRKQGPGEVTAADISAPGGVEVHN PDLHIASLNDEGQLDIELTIERGRGYVSAAQNKNADAEIGRIPVDSIYSPVLKVTYKVEA TRVEQRTDFDRLIIDVETKPSILPRDAVASAGKTLVELFGLARELNVEAEGIDIGPSPVD AALAADLALAIEDLDLTVRSYNCLKREGIHTVGELVARSEADLMDIRNFGSKSIDEVKQK LNELNLSLKDSPNGFGEANLDSDESFVEDEQF >gi|294970698|gb|ADNU01000069.1| GENE 45 43300 - 43701 615 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62423122|ref|ZP_00378293.1| COG0100: Ribosomal protein S11 [Brevibacterium linens BL2] # 1 133 1 134 134 241 91 7e-63 MPPKSRASARPTRRKVKKSVVNGQAHIKSTFNNTIVSITDPTGAVISWASSGEVGFKGSR KSTPYAAQMAAESAARRAQEHGLKKVDVFVKGPGSGRETAIRSLQAAGLELGTIQDVTPV PHNGCRPPKRRRG >gi|294970698|gb|ADNU01000069.1| GENE 46 43729 - 44097 592 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62423123|ref|ZP_00378294.1| COG0099: Ribosomal protein S13 [Brevibacterium linens BL2] # 1 122 1 122 122 232 95 3e-60 MARLAGVDLPREKRVEVALTYIYGVGRTRASQTLTETGVNPDTRVKDLTDDELVQLRDYI EGTFKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK KK >gi|294970698|gb|ADNU01000069.1| GENE 47 44261 - 44374 178 37 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116671489|ref|YP_832422.1| 50S ribosomal protein L36P [Arthrobacter sp. FB24] # 1 37 1 37 37 73 89 3e-12 MKVKPSVKKICESCKVIRRNSRVMVICTNPRHKQRQG >gi|294970698|gb|ADNU01000069.1| GENE 48 44439 - 44660 338 73 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 73 1 73 73 134 89 9e-31 MAKKEGVIEIEGTVVEALPNASFRVELTNGHKVLAHISGKMRQHYIRILPEDRVVVELSP YDLSRGRIVYRYK >gi|294970698|gb|ADNU01000069.1| GENE 49 44847 - 45845 622 332 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396444|ref|ZP_06806606.1| ## NR: gi|295396444|ref|ZP_06806606.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 332 1 332 332 650 100.0 0 MLFKFKYSTWKPNHSTLRTVIAELEAIHSLALTHGLSSVRADLGTINAFLVTNPKARAVR TALIQHLHVHRPELTYLLKYLPAVEPRFRGPATHELARLHDGVTQVRQGQLGDCWLIATL AACENAKPGFTASLIEHSPHINSPHTVHTAGVRLHSPWPRTIAVTRWVPRRHRAGDNRLD ANNASLVEKAVASLVHSYVRIQFNFAGTALWLLTGTWCPARPVPRDLGVVREWLASGRPV VASTLVHRRGARRLPREDHPDRWVGVMAGHVYVVCEVLRCDEDGRTDDDAPWRVHVHNPL GSAEGEPRRTDLFLSAAQFKRAFLSVNVGPVV >gi|294970698|gb|ADNU01000069.1| GENE 50 45963 - 48026 2186 687 aa, chain - ## HITS:1 COG:HI0712 KEGG:ns NR:ns ## COG: HI0712 COG1629 # Protein_GI_number: 16272652 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Haemophilus influenzae # 452 551 12 102 1084 71 33.0 7e-12 MGVTPSKRLMSFGAALAVGFAGVATTGTASFASEAAVAGAQFESNGDKLAQDSKVKGYAR GEDGKVLIFKVKGDKLGKDAEKFIRSHKNVEVVELDKPASFASGGQVVAGHPTLMGNDTG SKAAVCSAGFALLSKKFTPQISTAGHCTAANIDAGDNLTIGTATKLLWADPKGSPAAGGK AEKGNDLVTGAIKSFQMGAPGQKKPDYSLPPGAVEFQNGKKYIDFGIYDLKTFEGVYPRV TKWTDPSDLVDDSIPVQKLHDAEINDTVARSGRTTGFHSGKVVATGWFNVQGRMVKGFGG YIEGKPGDSGGPVITQDGGAAGVFSAYAKTDDGNYAWFSDLRNDLDQIGDGSRVLVEKEP AFDGAKAAAKSGPKGLTKSAKAAAEPVSTKVEEGGSLSGKADSMFTGGTFVLKDGTEVSV TVKDGKWSFKAPGKAGDKVSGNLFLHTKHEVSLPLAISYTVTKASDKPTQKPTQEPTQKP TQKPTQEPTQKPTQKPTQEPTQKPTQKPTQKPTQKPTEKPTEDAKTTLTVDPERIDVDKF AGDGKKDDKVGVSYTVKGLKPGTKVTFQTLFDGKVVRETSGVADENGVAVARVWGESGPR EGFLGKYSVIAKFDESELTGQFEVVDDTAQPGDKGDQGDKGKDDKSGNKGTNVLPRTGTS ALAATGVAIGMIAVGGGLIAASRRRKA >gi|294970698|gb|ADNU01000069.1| GENE 51 48206 - 48667 333 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396446|ref|ZP_06806608.1| ## NR: gi|295396446|ref|ZP_06806608.1| possible heat shock protein [Brevibacterium mcbrellneri ATCC 49030] possible heat shock protein [Brevibacterium mcbrellneri ATCC 49030] # 6 153 1 148 148 276 100.0 5e-73 MDPSDMLGSTDALGAKMRGVWAVLIAGILLLAGCSQSSSDNQFGGTEDAESSDTNQSRIL GRWEAREKGDAFLEFHEDGTVEGSTGCNGILTRYSMNSDPERNAARLEDYATTLRGCPGV DEWLAEGREVEFDDTQMTVKDHSGKEIGKLFRS >gi|294970698|gb|ADNU01000069.1| GENE 52 48687 - 51488 2836 933 aa, chain - ## HITS:1 COG:MT2281 KEGG:ns NR:ns ## COG: MT2281 COG0596 # Protein_GI_number: 15841715 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 181 715 69 512 520 208 29.0 4e-53 MTQNQLQRRRRGVGAFAFISSLSLAVTMGALPAQAQPTEETPNQDSATEAAQTPGVSEEA QEVAEPRAPEERVAPEDTSGAETTETPADSDAEVATEDPTRVNKDEEPDDDALDKYYPKL AKTMFDPDGDGKYKITEPVEGGKGAGNIPSGLEKYYNQKVDFSPENCEALGYGTYESRIG RKAECGYMIAPIDVNDASKGNIAIAVMKVKSGKLDENGKFTPTKSKGSVMWNPGGPGGSG MTMSVVGALYDPELAEDFDMIGFDPRGTGSSMPFSQCSSDKQIDEDRESNSFGMDLEDAE KDLNDRAKRYTEDCFNNTGKLFDLGKANQQDVMEHLGTWDAVGDLDLLRSITGNDKLNYV GFSYGTRLGYVYAQKYGANVGKLVLDGVVDPGNVDKAAIESLKQINQRSDRYLSKKVAAE APVDGSDFTDDQKDTIAQGAGFQGTFEQFALDCSEKGAEGKTYGELWPEFAETELADQPF SCALGDGITDTKKLTEANAKLLQTLETANGGKGLPTGQPNDNRMVSFADGRQGVFQALYS ETLWSQLNVALNELKAGKSAGGLMILADQYMDRDEEGHYAPMLQAFTNIRCTDSNSKGDM PSKDLIRRFAQAYDEAAPFQAATVAPGVYDYCDFWKFKGTLPGPEKLTKVPNILVISTSH DSATPYDSGVKLARLIDGTLLSVSGASHTSFISGDEEKICVDETVNDFFKKGIVPEDGDF GAKLKKPDTAKDDLGNTVTFNTRCKVQTFRESSFSTSTSKAHAGEKIGYMFGHYNSEADY SIRVGDETVATVKADNGGNGAGTFTLPASLKPGTVKVSLVDANGKVVATRDLEIMKAEQP KEDDPESGGNVDNGKDGSDKGGSDEGGKDGSSDEGSDKGGSSDTGDGKGSKDSNANGSMP RTGAELGFQAGIALILVAAGAGAVAVARKRKQL >gi|294970698|gb|ADNU01000069.1| GENE 53 51577 - 52401 825 274 aa, chain - ## HITS:1 COG:BS_map KEGG:ns NR:ns ## COG: BS_map COG0024 # Protein_GI_number: 16077206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus subtilis # 9 253 5 246 248 212 41.0 5e-55 MFGSKVELKSDKEIVLMRKAGLVSRAALEAARSVLVPGVTTVEVDAASAQAIADAGATSN FLGYYGYPATVCISVNEEIVHGIPGDRVIREGDLVSVDGGAIVDGWHGDNAFTTIVGDGG DPADQRLSDVTEESMWAGIAAFASAKRIGDVGAAIEGYIMEVAPDLSVVEDFTGHGIGTQ MHMEPEVLNYGAKNRGPRVRPGMVICIEPIVVRGDQANTTLDDEWTVITNDGSRAAHWEN TVAMHQNGIWVLTEPDGGEARLAPYGVTPVPLPE >gi|294970698|gb|ADNU01000069.1| GENE 54 52401 - 52964 759 187 aa, chain - ## HITS:1 COG:XF0275 KEGG:ns NR:ns ## COG: XF0275 COG0563 # Protein_GI_number: 15836880 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Xylella fastidiosa 9a5c # 1 186 12 197 198 174 48.0 7e-44 MRIILIGPPGAGKGTQAARLSEKLGIPAISTGDTFRANVKNETELGKTAKRYMDAGEYVP DEVTNSMVQDRLNQDDTANGFMLDGYPRTEAQVHELDRMLKEASQELDHVVELTADTDEI VARLLARAQIEKRADDTEDVIRHRLDVYVEQTQPLTDIYQERGLLRKVDGLGEIDEVTDR VLKALGV >gi|294970698|gb|ADNU01000069.1| GENE 55 52986 - 54287 874 433 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 3 433 15 438 447 341 44 6e-93 MLGAIGRAFRTPDLRNKLLFTLGVIVLFRLGSFIPAPGIDYSQVQTCVASPALGQGAFGL INLFSGGALLKLSIFALGIMPYITASIITQLLRVVIPRFEALHKEGASGQAKLTQYTRYM TIALAILNATTLVTTVRTGALFGNVDACMNLIQNDTWWGICIIVLTLTAGTALIMWMGEQ ITERGVGNGMSILIFTSVAAGFPAALNSILTSKGIDIFAIVLAVGLLVILAVVFVEQSQR RIPVQYAKRMVGRRMFGGTSTYIPIKVNQAGVIPVIFASSVLYLPTLISQFGDPEAGWVQ WINAHLTRGDHWIYILTYAVLTIFFAYFYVAITFNPEEVADNMKKYGGFIPGIRAGRPTE QYLSYVLTRITFPGSLYLTVVALIPLIALILIDANQDFPFGGTSILIVVGVGLETVKQIN SQMQQRHYEGLLR >gi|294970698|gb|ADNU01000069.1| GENE 56 54451 - 54975 253 174 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396451|ref|ZP_06806613.1| ## NR: gi|295396451|ref|ZP_06806613.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 174 1 174 174 322 100.0 9e-87 IPEVSRTCRDKLLYIAEHHGYGKLRSGALLGVVDRSHEVLPFVELPQDAWATATTLRPVS QRQARELVERAYRVSEKVQDIEGVSTQVAQLERSYRSSSGLSPSKYYDVFFTASMLGFRL PSLPDEVTVGPNLAVAQAKLMKTLLELHSAALRESEKAVANAVPSAHLIEYRDH Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:09:52 2011 Seq name: gi|294970644|gb|ADNU01000070.1| Brevibacterium mcbrellneri ATCC 49030 contig00104, whole genome shotgun sequence Length of sequence - 57185 bp Number of predicted genes - 52, with homology - 50 Number of transcription units - 29, operones - 13 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 122 - 871 474 ## COG2801 Transposase and inactivated derivatives + Prom 906 - 965 1.5 2 2 Op 1 4/0.000 + CDS 1011 - 2177 353 ## PROTEIN SUPPORTED gi|15900201|ref|NP_344805.1| hypothetical protein SP_0267 3 2 Op 2 . + CDS 2183 - 2842 695 ## COG0431 Predicted flavoprotein + Term 2975 - 3012 1.7 4 3 Tu 1 . - CDS 2920 - 3411 652 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 3435 - 3494 1.9 + Prom 3459 - 3518 3.3 5 4 Op 1 . + CDS 3542 - 4534 1230 ## COG3181 Uncharacterized protein conserved in bacteria 6 4 Op 2 . + CDS 4531 - 5121 644 ## cgR_2709 hypothetical protein 7 4 Op 3 . + CDS 5121 - 6647 1331 ## COG3333 Uncharacterized protein conserved in bacteria + Term 6815 - 6876 19.6 + TRNA 6730 - 6811 60.1 # Tyr GTA 0 0 + Prom 6736 - 6795 80.4 8 5 Tu 1 . + CDS 6939 - 7910 362 ## gi|295396460|ref|ZP_06806621.1| hypothetical protein HMPREF0183_2119 + Term 7966 - 8005 2.6 9 6 Op 1 . - CDS 7828 - 8901 412 ## COG2801 Transposase and inactivated derivatives 10 6 Op 2 . - CDS 8978 - 9535 519 ## HMPREF0733_10638 hypothetical protein 11 6 Op 3 1/0.125 - CDS 9535 - 9918 335 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 12 6 Op 4 . - CDS 9915 - 10496 425 ## COG1309 Transcriptional regulator - Prom 10666 - 10725 2.0 + Prom 10573 - 10632 2.7 13 7 Tu 1 . + CDS 10714 - 12300 941 ## smi_1727 hypothetical protein + Prom 12306 - 12365 1.7 14 8 Op 1 . + CDS 12426 - 13766 1348 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 15 8 Op 2 . + CDS 13766 - 14566 549 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Prom 14604 - 14663 2.2 16 9 Tu 1 . + CDS 14693 - 15919 1002 ## COG1228 Imidazolonepropionase and related amidohydrolases + Term 15985 - 16021 -0.6 + TRNA 16024 - 16096 78.4 # Thr GGT 0 0 + TRNA 16124 - 16200 87.7 # Met CAT 0 0 - Term 16194 - 16251 16.2 17 10 Tu 1 . - CDS 16275 - 17444 405 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 17660 - 17719 80.3 + TRNA 17641 - 17717 87.7 # Met CAT 0 0 18 11 Tu 1 . - CDS 18095 - 18784 318 ## COG2186 Transcriptional regulators - Prom 18905 - 18964 2.5 + Prom 18788 - 18847 3.8 19 12 Op 1 4/0.000 + CDS 18937 - 20373 1237 ## COG0531 Amino acid transporters 20 12 Op 2 3/0.000 + CDS 20453 - 21862 916 ## COG0174 Glutamine synthetase 21 12 Op 3 2/0.000 + CDS 21894 - 22658 187 ## COG2071 Predicted glutamine amidotransferases 22 12 Op 4 7/0.000 + CDS 22680 - 24044 652 ## COG1012 NAD-dependent aldehyde dehydrogenases 23 12 Op 5 2/0.000 + CDS 24098 - 24880 264 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 24 12 Op 6 . + CDS 24967 - 25689 115 ## COG0518 GMP synthase - Glutamine amidotransferase domain + Term 25791 - 25841 10.1 + TRNA 25720 - 25788 29.1 # Met CAT 0 0 25 13 Tu 1 . + CDS 26032 - 26421 344 ## gi|295396477|ref|ZP_06806638.1| conserved hypothetical protein + Term 26438 - 26494 14.1 26 14 Tu 1 . + CDS 26551 - 26757 247 ## + Term 26811 - 26847 -0.4 + Prom 26791 - 26850 3.3 27 15 Tu 1 . + CDS 26937 - 29549 1441 ## COG2909 ATP-dependent transcriptional regulator + Term 29762 - 29809 1.1 - Term 29520 - 29560 8.9 28 16 Op 1 4/0.000 - CDS 29596 - 30099 587 ## COG4647 Acetone carboxylase, gamma subunit 29 16 Op 2 10/0.000 - CDS 30164 - 32494 2295 ## COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit 30 16 Op 3 . - CDS 32526 - 34679 2131 ## COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit 31 17 Op 1 . + CDS 34875 - 35330 418 ## Achl_2739 hypothetical protein 32 17 Op 2 . + CDS 35323 - 35796 528 ## COG2030 Acyl dehydratase 33 17 Op 3 . + CDS 35793 - 36869 775 ## COG0812 UDP-N-acetylmuramate dehydrogenase 34 18 Tu 1 . - CDS 36879 - 37934 852 ## COG1816 Adenosine deaminase - Prom 38092 - 38151 78.4 + TRNA 38078 - 38150 82.0 # Trp CCA 0 0 + Prom 38077 - 38136 77.8 35 19 Op 1 . + CDS 38187 - 38447 241 ## RSal33209_0986 preprotein translocase subunit SecE 36 19 Op 2 45/0.000 + CDS 38497 - 39309 980 ## COG0250 Transcription antiterminator + Term 39337 - 39379 11.0 + Prom 39347 - 39406 1.9 37 20 Op 1 55/0.000 + CDS 39488 - 39925 631 ## PROTEIN SUPPORTED gi|229821641|ref|YP_002883167.1| ribosomal protein L11 38 20 Op 2 . + CDS 39985 - 40680 1019 ## PROTEIN SUPPORTED gi|62424444|ref|ZP_00379590.1| COG0081: Ribosomal protein L1 + Term 40691 - 40743 16.3 39 21 Tu 1 . - CDS 40605 - 40796 82 ## 40 22 Tu 1 . + CDS 40889 - 44938 4219 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 44996 - 45041 14.2 - Term 44983 - 45027 10.2 41 23 Tu 1 . - CDS 45102 - 45860 502 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 45974 - 46033 3.0 42 24 Op 1 47/0.000 + CDS 46233 - 46769 615 ## PROTEIN SUPPORTED gi|62424440|ref|ZP_00379586.1| COG0244: Ribosomal protein L10 43 24 Op 2 . + CDS 46827 - 47216 491 ## PROTEIN SUPPORTED gi|239918209|ref|YP_002957767.1| LSU ribosomal protein L12P + Term 47277 - 47319 12.3 44 25 Tu 1 . + CDS 47417 - 48616 1159 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 48629 - 48676 13.8 45 26 Op 1 21/0.000 + CDS 48762 - 49808 1338 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 46 26 Op 2 17/0.000 + CDS 49805 - 51487 1314 ## COG1178 ABC-type Fe3+ transport system, permease component 47 26 Op 3 . + CDS 51484 - 52560 813 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 48 27 Tu 1 . - CDS 52580 - 53215 582 ## DIP0066 hypothetical protein - Prom 53265 - 53324 2.5 49 28 Op 1 40/0.000 + CDS 53559 - 54281 550 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 50 28 Op 2 . + CDS 54278 - 55405 811 ## COG0642 Signal transduction histidine kinase 51 29 Op 1 15/0.000 + CDS 55515 - 55841 191 ## COG2608 Copper chaperone 52 29 Op 2 . + CDS 56104 - 57184 1094 ## COG2217 Cation transport ATPase Predicted protein(s) >gi|294970644|gb|ADNU01000070.1| GENE 1 122 - 871 474 249 aa, chain + ## HITS:1 COG:AGc3822 KEGG:ns NR:ns ## COG: AGc3822 COG2801 # Protein_GI_number: 15889390 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 244 265 505 512 221 48.0 8e-58 MPGKHAHVRGLLHQISDQSLNTYGYRRIWWELRHRGIIMSEKVVRRLMREEGITPRFPKR KWKYSSYQGEISVAPPNLVNRKFHADRPNRLWLTDISVFTANEGRVYLSAIIDCFDGKVV AAKTSTHPTMELAEETLHAAITAERPVADGSLIIHSDRGAHYRGKTWQQLTSKHQIVRSM SKKGCTPDNAACEGFFGRMKNEMYYGKKWRTTQELENAIAAYIEFYNNHRIKTSLNGLTI AKHRALKVA >gi|294970644|gb|ADNU01000070.1| GENE 2 1011 - 2177 353 388 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900201|ref|NP_344805.1| hypothetical protein SP_0267 [Streptococcus pneumoniae TIGR4] # 1 333 2 342 349 140 27 2e-32 MEFGLFSVSDVTRDPVSGETPSEGERIRSLVQQAVFSEEAGFDVYAIGEHRNPPFVSSSP TTLLATIAAQTTRLKVSTSTTLITTNDPVKIAEDYAMLQHLSDGRMDLMLGRGNTAPVYP WFGQDIRKGLPLALENYNLLHRLWREDVVDFEGSFRTPLNGFTSTPRPLHGVPPFVWHGS IRTPEIAEQAAYYGNGYFANHIFWPSEHSQRLVNFYRQRFEHYGHGSAKQAIVGLGGQAF VARKSQDAWDRFRPYFNEAPVYGHGPSLEEFVNQTPLSVGSPQEIIEKTLTFQETFGDYQ RQMFLVDHAGMPHSMVMEQIELLGSEVLPVLRAELESRRDPEVPDAPTHESLVRARYGDK PPREPRPRANRGDNVTGGSPYLDTDQEG >gi|294970644|gb|ADNU01000070.1| GENE 3 2183 - 2842 695 219 aa, chain + ## HITS:1 COG:Cgl1606 KEGG:ns NR:ns ## COG: Cgl1606 COG0431 # Protein_GI_number: 19552856 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Corynebacterium glutamicum # 61 174 3 119 165 94 46.0 1e-19 MQDATVVVINAGTSETSSTATLLSQIAKSVHGAEENVTCTFINVRDVAQDAMTALVSGHK SPALKEIEATLRDADALIVGTPVFKAGASAVFMAFFQALDNDLLIGTPVLLAGTAGSQRH ALVVDDQIRGLFAYLRTYTTPTSVFAAPEDFNDPKLRTRCARAAGELLALIRADVRGSAR NNTWDHYQHSYGSAGDTELSIYLDSDLMRLATGNRYSGQ >gi|294970644|gb|ADNU01000070.1| GENE 4 2920 - 3411 652 163 aa, chain - ## HITS:1 COG:MT0592 KEGG:ns NR:ns ## COG: MT0592 COG1666 # Protein_GI_number: 15839964 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 3 163 2 163 163 186 68.0 2e-47 MASDSSFDIVSKVDRQEADNALNQAAKEINSRYDFKGTDASIEWSGEKIMMKAVSEDRVK AVLDVFQSKLVRRGISLKSLDAGEPYASGKEYRLEAAIKEGIDQENAKKISKLIREEGPK GVKAQIQGDELRVSSKKRDDLQAVIAMLKSQDLDVDLQFTNYR >gi|294970644|gb|ADNU01000070.1| GENE 5 3542 - 4534 1230 330 aa, chain + ## HITS:1 COG:Cgl2764 KEGG:ns NR:ns ## COG: Cgl2764 COG3181 # Protein_GI_number: 19554014 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 28 329 36 334 334 288 49.0 1e-77 MKQRKRPVGLLVFAVITAVVLVVAMTVSIQRASASDNVRANLTLIAPAGAGGGWDGFVRE QQQAMRQAGLVGNVQVVNIPGAGGTIGLGRFSTMHERSDTLLATGSAMTGGILINNSPVG YDDVVPLAKIAEDYDVVIVPADSPLETIDDLLNEWKEDPKGHPWTGGSAGSMDHLVVANL AQEAGLDGKETTFIPKSGGGEAIAALLNGTADYAATGYNEVADQVEAGRVKALGVTGPER IEGVDIPTIKEQGHDVVLANWRGMLAAPGVSEEVAQQQLELLKEMRDTPEWQDALKRNAW ADAWETGDDLAKFLEEDQKKTAELLKELGL >gi|294970644|gb|ADNU01000070.1| GENE 6 4531 - 5121 644 196 aa, chain + ## HITS:1 COG:no KEGG:cgR_2709 NR:ns ## KEGG: cgR_2709 # Name: not_defined # Def: hypothetical protein # Organism: C.glutamicum_R # Pathway: Two-component system [PATH:cgt02020] # 31 194 31 187 188 114 40.0 3e-24 MSGSRAVDPVKPGENDQFEILGHENLKDRGWWTGRAGLAMPALMVAVATYMLIGQFAMKV PESVDLPGPQFFPWIIIVALYVLAAVLAFEIIRNPQLPELAPATEPEDLEERAWYTDWRA AAWAVGGLVLFIALIVPVGWIISAALMFVMVAHAIGSQRWVMDVLVGLFLSSVIYLIFAV LLSVDLPSGLIFAGGR >gi|294970644|gb|ADNU01000070.1| GENE 7 5121 - 6647 1331 508 aa, chain + ## HITS:1 COG:Cgl2762 KEGG:ns NR:ns ## COG: Cgl2762 COG3333 # Protein_GI_number: 19554012 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 496 1 497 510 631 73.0 0 MDALSSLIEGFGSALIPINLLWVLVGCLLGTAVGVLPGLGSSMAVALLLPMTFALEPTGA FIMFAGVYFGGLFGDSTMAILMNTPGQSSAIASTFEGHKMATSGRAPQALATAAIGAFIG GMIASILVVFLAPTLANLSTLFGPAEYFALALFAFVATSSVVSDSVVKGLGSLVLGLAIA VVGIDSVSGVERFTSGVPELFDGISIVTVTVAVLALGEILRVASRASRERDQFKVLAAGR PFLSRAEVRQALPAWMRGTAIGLPFGVVPVGGSEVPTFMAYGLERRIDKKSGRNQFGKGA IQGLAAPEAAGNATTGMAMASLLALGLPVTGTAAILLAAFKQYGLQPGPLLFDRSPDLVW GLLASFFIAMVVLLILNLPFAPLWAKLLLIPKPYLYAGITMFCVLGIWATSNSVFDLAML LAIGLVGWMMRRFGMPIAPLMIGMVLGPLAETNLRDALLSSNGDVSVLFGSSITIVLYVT LALVVGAAIYSRVRKKGTFEEHPEMTSA >gi|294970644|gb|ADNU01000070.1| GENE 8 6939 - 7910 362 323 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396460|ref|ZP_06806621.1| ## NR: gi|295396460|ref|ZP_06806621.1| hypothetical protein HMPREF0183_2119 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2119 [Brevibacterium mcbrellneri ATCC 49030] # 1 323 6 328 328 590 100.0 1e-167 MTGRQGTGRARKAELFIKLSGWFVMGGALALAFFWYFKPSVIRVSLWQAACYVGGVIILI LIAKLVKPFRTTFNPVAQAAFYVPTVRGTCVRFTIITALIVFGWSGEMEYTAPIHPSGTL VVGVLQFLWWIISLVCLSIRAVVANRIPEYVARDRSDAFSFGGHSPSRRPVSSANNQSFD FSDTSPRLSPDPESASLPPTGSHDVEPEDFDPYLDVPHPSPVEPQQTEPEEPETEHPEKP QPQSPTYSQEQSGVPTFGAQLNFNHTGSQRSAAYGSGPAGAHTGSGPTRSGNTSGTLNCP QCNAPKPAYMHLCPACADASGRH >gi|294970644|gb|ADNU01000070.1| GENE 9 7828 - 8901 412 357 aa, chain - ## HITS:1 COG:mlr5757 KEGG:ns NR:ns ## COG: mlr5757 COG2801 # Protein_GI_number: 13474791 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 54 320 1 251 263 184 42.0 2e-46 MSHPNAALTPRHRLKVAQLVVDQGWPISEVAARFQVSWPTVKRWADRYRAGQPMQDRSSR PHHSPNRTNPKTTKRCIQLRLRLSEGPVQLACRLGIAPSTVHRILVDAHLNRLTHVDRAI GEPVRRYEHDHPGAMLHVDVKKLGNIPDGGGWRYVGRQQGDRNRAATPDKPRNKYRDPLM GKAYVHTVIDDHSRVAYAEIHDDETALTATAVLVRAVEWFNQRGITVERVLSDNGGAYRS HLWRDTCAELGVRHKRTRQYRPQTNGKIERFHRTLADGWAYARCYTSEAERRGELDGWLH YYNHHRPHTACGNQPPFSRLTNVSGQYISAASASPMRQRMLGTSACMRAWARCTGGS >gi|294970644|gb|ADNU01000070.1| GENE 10 8978 - 9535 519 185 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0733_10638 NR:ns ## KEGG: HMPREF0733_10638 # Name: not_defined # Def: hypothetical protein # Organism: R.dentocariosa # Pathway: not_defined # 4 184 1 181 186 249 64.0 5e-65 MYAMQYQITLPTDYDMQIIRDRVTRTGHLMDGYHGLEFKAYLIQEKAKGAPRNAYAPFYV WRDIDGMRQFCWGEPGYSAIVRDFGRYPIHDWTVHQFVAGPADYSAARSLTVKTVPLPVG AAPSHCIEDITADFLATTTDSTVARVAAVDVTTWAVILVELCTREADESSTDVAAYEVLH VSAAA >gi|294970644|gb|ADNU01000070.1| GENE 11 9535 - 9918 335 127 aa, chain - ## HITS:1 COG:mll2544 KEGG:ns NR:ns ## COG: mll2544 COG1917 # Protein_GI_number: 13472299 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Mesorhizobium loti # 7 119 18 129 131 83 44.0 9e-17 MSFTPGHFTGAVEAKTLAAPTRESTLTVYAVTFAAGARTHWHTHPKGQGLYVTDGVALVH IEGQAPQHLAEGESIWIDAGQWHWHGATPERAMTHVAYQQAADDLSTICWQEAVTPTTYS HATKENH >gi|294970644|gb|ADNU01000070.1| GENE 12 9915 - 10496 425 193 aa, chain - ## HITS:1 COG:RSc1201 KEGG:ns NR:ns ## COG: RSc1201 COG1309 # Protein_GI_number: 17545920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 7 187 18 204 209 73 31.0 2e-13 MYTGGMDTRRRLLDATQDLLWERGYAATSPKDILSRAAAGQGSMYHHFSGKQDLAVAALE ASATAMRDDVDALLRGEGTATERLVAYLERQRDSLRGCRMGRMTYDADVLSTPELLQPVS ATLAWLVETIGAVVSEGIDAGEFSSETDAHQLASMVVATVQGGYVLARAQQDPAEFDAAV HGATTLLRTWSQR >gi|294970644|gb|ADNU01000070.1| GENE 13 10714 - 12300 941 528 aa, chain + ## HITS:1 COG:no KEGG:smi_1727 NR:ns ## KEGG: smi_1727 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 194 423 49 270 273 147 35.0 2e-33 MALAEELRTDRARRPRRVVIITGWIYTTWFLSITIFWYCNPFVGRSIFGQIVACICALVL LKFGLHMVIGSFRTLKATSIREYQEIGNVTETVIAMGILTVVTGIGFVLDGSLIAERLYE LDIPDKDVNRRFWIAGTAQFLWWITSWVLLIVRAIAAKRVITGTEQDERDSLAIQRREAE VALEWELNAQRNRLTSPTQAGTRSQYDADQVKDWPVPTGYDLMFGSPGAGLESSGFNESK VAKGQLGELNFAKTLAAEGMLDRFATFWSIHIPDEEVGWSTKYTSDIDCVVVTGRTIMVI DLKYYMQGDITWKVDEDNKLVAVDNHKDVYVGQPRSMSRNMEMADSIVKRRSSDARLPHN VTSRVVFMPTNSGSGSIYPGTTWTGNIPVCNLSDVLELLREEPPINMNDTNDQAAVRMFK NLLKEESYWASVQKPAPAQQSPAPRNNRPVRIAPTGNAPASFSTPRNSATPSSHSSATYG SGPAFTPTGSGPVHPGNTSGTSTCPQCHAPKPAYMHACPACGHAPSRH >gi|294970644|gb|ADNU01000070.1| GENE 14 12426 - 13766 1348 446 aa, chain + ## HITS:1 COG:Cgl2027 KEGG:ns NR:ns ## COG: Cgl2027 COG0334 # Protein_GI_number: 19553277 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Corynebacterium glutamicum # 2 446 3 447 447 608 66.0 1e-174 MLDEAIDKLYSKVLKRNPAEPEFHQAVKEVLASLRAMGDRHPEYADARIVSQMCEPERQI IFRVPWIDDNGVIQINRGFRVEFNSALGPYKGGLRFHPSVNLGIIKFLGFEQIFKNSLTG LPIGGGKGGSDFDPRGKSDDEVMRFCQSFMIELYRYIGEYSDVPAGDIGVGSREIGYLFG QFKRITNRYESGALTGKGLTWGGSLVRTEATGYGAAIFANEMLKSKNTSLDGTTVSVSGS GNVAIYAIEKVHQLGGKAVTASDSSGYVYDKQGIDLELLKDIKLNRRGRIGEYVETRTSA RFVPNNCPWDVPVDVALPCATQNELLGSDAKKLIKNGVQAVAEGANMPCNEEAVEAFQNS EVLYGPGKAANAGGVATSALEMQQNAQRDSWSFDYTEERLTQIMQNIHRRCLETAEEYGH PGDYVMGANIAGFRKVADAMLAFGVV >gi|294970644|gb|ADNU01000070.1| GENE 15 13766 - 14566 549 266 aa, chain + ## HITS:1 COG:BS_yhdW KEGG:ns NR:ns ## COG: BS_yhdW COG0584 # Protein_GI_number: 16078027 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Bacillus subtilis # 22 250 2 231 243 126 33.0 5e-29 MFSDYLREREIDEVPGRGVKPWVIAHRGYSGAVPENTMAAVDAARLIGCDFIEVDLHVTA DGVPVVVHDPTLQRTTDIQGTIAHMSYDRISLADAGYGHGLGFAGQRIPRLDAMLKNVAE MGGRMLLELKGEWSPGAVARVGQEIAEVGMADRVILQSFNVRSVEVCRDIAPHVPRGLLR LVPREEDMGLAQRLEVVAVNPSIRGFHARRDFVEEVLGRDLAVFVYTTDSPRDWEKLVGA GVTGIITNQPGRLQGFLAAKYDIAHS >gi|294970644|gb|ADNU01000070.1| GENE 16 14693 - 15919 1002 408 aa, chain + ## HITS:1 COG:MTH1534 KEGG:ns NR:ns ## COG: MTH1534 COG1228 # Protein_GI_number: 15679530 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Methanothermobacter thermautotrophicus # 27 388 43 398 424 254 42.0 2e-67 MAQKADVLVTNVALFDGEAFKDETYDVRVEDGRFSAVEPAGTLEKQDSETVVDGTGHTLT PGIIDCHIHALVNNAGSLEGFTEPFSLQFYRGVENLRLTLEAGVTSARDAGGADAGVREA LERGLVRGPRLKVAVTIMSQTAGHGDGMLPSGACSPMLMPHPGRPSGVADGAQGVQVKTR ELIRAGADHIKICSTGGVLSAADDPRHSQFTVDEISTIVAEATAQGRRVMSHAQGTAGIK NAVLAGVASIEHGIYLDDETVDLMLERDCVLVPTLQAPLAVIRAAEAGVPIPEAMVEKAR RVAERHRESVAMAHQAGVRIAMGTDAGVGVHGQNLEELELMAGVGMSTAEVLRASTANAA DLMGDDSVGRVRVGNHGDFVLFEGSVEEHGVGQLRSVEKRVFQGGVAV >gi|294970644|gb|ADNU01000070.1| GENE 17 16275 - 17444 405 389 aa, chain - ## HITS:1 COG:SA2099 KEGG:ns NR:ns ## COG: SA2099 COG0654 # Protein_GI_number: 15927886 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Staphylococcus aureus N315 # 13 379 13 366 374 157 30.0 4e-38 MRIAVVGAGITGLCVSAGLQSSGADVTIFERSDDMRPGGSGLSIFGNGMKALDYLGLGAR VRTLTDISYQGKYVPYASRFVGGLRSPNGSWFTRVPAGQIEGLRVVERSDLHAILSSAVI MDSVRTNAPVIKVTETGKITTANGHFDSFDLVIGADGLRSVVRSCMPFDTGVKYAGYSAW RGITDQPVTLNWEAGETWGNGARFGIAPLSDGRVYWFATRSGKLTTGPADIRGALLDEFS DWHAPVAELITQTENIQYLPIFELANAPKSFIHGRTVLIGDAAHAMTPNLGQGGNIGIED AAQLVHCLADIADAPHVESTDLFKRLNSYDLLRRPRANRIALASRRVGRLAQASSPLLVT GRNAALRAVPSRVFRNQVESVQRWELTSI >gi|294970644|gb|ADNU01000070.1| GENE 18 18095 - 18784 318 229 aa, chain - ## HITS:1 COG:ECs4482 KEGG:ns NR:ns ## COG: ECs4482 COG2186 # Protein_GI_number: 15833736 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 31 225 28 232 258 76 31.0 4e-14 MQSHQSSRRNIFEETLSTVLRRISLGQYIRGEKLPAERDLAIELGVSRSTLRDVLGELQT TGILEISRGRYGGARVVGLPSDYERHKSVKPEDLDDALRFREVIEVAAVRLATEATLSAG QRRHLHEACNACTSAEEDAYRQFDSRFHIAIAEVSGIPSLISAVSDVRERINSLLDSIPM ISVNLTHANEQHQAILSAILSGDTGAAERLTIEHTSGTATLLRGYLLHS >gi|294970644|gb|ADNU01000070.1| GENE 19 18937 - 20373 1237 478 aa, chain + ## HITS:1 COG:PA4023 KEGG:ns NR:ns ## COG: PA4023 COG0531 # Protein_GI_number: 15599218 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 5 477 15 481 482 473 57.0 1e-133 MSKKIGTSTVESDYLAKRQLRKGAAGWVLLAGLGVAYVISGDFSGWNLGLAQGGWGGLAV AFVLMGIMYVCMTLGLAELSSTLPTAGAGYGFARRALGPLGGFVTGAAILIEYTMAPAAI STFIAGYVRALGILPEAVPAWSIYLVAYIIFVGIHVWGVGEALRLMFVITAIAVVALLAF VLGMVWHVDASNMFDITPDGSLGSSVYFPYGVSGILASLVFGIWFFLAIEGVPLAAEESA NPKKDMPRGIMVAMGTLVLSGALMLIIVPGTLGASSAGVSDNPLPEAVRSIYGNNSVLAT FVNWAGLAGLVASFFSIIFAYSRQLFALSRAGYLPRFLSLTGSKKTPYLALIVPGTIGFS LAVVTGGTGGILLNVAVFGATVSYVLLNLSHIVLRFKEPQLKRGYRTPGGAVTTSVALVL ALIAVVATFFVDIKAAGIAAGVLMLFIAYFWFYSRRHLVAKAPEEEFSSISEAESKLN >gi|294970644|gb|ADNU01000070.1| GENE 20 20453 - 21862 916 469 aa, chain + ## HITS:1 COG:MT2928 KEGG:ns NR:ns ## COG: MT2928 COG0174 # Protein_GI_number: 15842402 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 16 469 5 457 457 558 60.0 1e-159 MQIPTSIGDSQRVSTGSNPASFITEDELRVLVDEGEVDTVVMAFTDAQGRLQGKRLSGRF FVDEAMHHGSEGCNYLLAVDVDMNTVDGYEISSWAKGYGDLVMRPDLSTIRRIPWQPGTV LVTCDIELTDGSVAEVSPRQVLARQVRRLEERGIRAFAGTELEFISFDTNYEDAWARGYR NLTPSNQYNVDYSLLGTARVEPLLRDIRNSMAGAGMYVECAKGECNLGQHEITFKYDDVI RTCDNHAVYKNGAKEIAAQHGKAITFMAKYNEAEGSSCHIHLSFRDLDGSPIMAGDREHG FSKLMEHFIAGQVACIEEFTYFFAPNINSYKRYVEGSFAPTAIAWGLDNRSCAFRVVGSG ESLRVEGRVGGADLNPYLAVAAMIAAGLYGIENELEMPAVTDGNAYVQGLRHLPTSLRDA RDLLANSDKAREAFGNEVVEHYAHAASVEVEQFSAAVTDWERVRGFERL >gi|294970644|gb|ADNU01000070.1| GENE 21 21894 - 22658 187 254 aa, chain + ## HITS:1 COG:MT2927 KEGG:ns NR:ns ## COG: MT2927 COG2071 # Protein_GI_number: 15842401 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Mycobacterium tuberculosis CDC1551 # 1 243 19 263 266 206 46.0 3e-53 MGGTRPIIGITTYRQPASWGAWNDVEAALVPSDYVGMVADAGGTPILLPPVGNDVTVLDR VDGLIFSGGADIDPHRYGADPHPLTRPQPHRDAWEFPLLQQALTLQLPVLGICRGMQLIN VALGGTLHQHLPEVVGHTNYQPAPGEYGTADVVTRESTLARQILGKSASVACYHHQSVDK VAPCLQVTAQASDGTIEVLEPGESFQGGWLLAVQWHPEHTRKDMRIVSGLVSAASRSGRR AHALSAAGNERVVS >gi|294970644|gb|ADNU01000070.1| GENE 22 22680 - 24044 652 454 aa, chain + ## HITS:1 COG:MT2926 KEGG:ns NR:ns ## COG: MT2926 COG1012 # Protein_GI_number: 15842400 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 1 450 1 450 455 535 63.0 1e-152 MNTYTVINPATEEAIREVELADEPTTDRAIVAAHEAFQRWRHTAPGERARLLRAFADSVE NHIDELADLEVANAGHTISNARWEAGNVRDVLEYFAGMPERLCGKQIPVEGGIDITFHEP LGVVGVIVPWNFPMPIAAWGFAPALAAGNTVVLKPAEVTPLTAMRLGELALEAGIPEGVL TIVPGKGSVVGGRFVTHPLVRKVVFTGSTEVGKRIMAGCASQVKNVTLELGGKNANIVFS DADVVAAAKAAPGGVFDNAGQDCCSRSRLLVHSDIYDDFMAALQESVSAFTCMNPLDEAA DMGPLVTAAHRDSVAQYVNESDVAFSGSCPSGPGFWFPPTVIEVNDLKARHFNEEIFGPV LSVTRFTEEREAIEIVNNTDYGLSGSIWTSNLDRALRVSRAVDAGNLSVNSHSSVRYWTP FGGFKQSGLGRELGPDAVQAFTEEKNVFIAFEDN >gi|294970644|gb|ADNU01000070.1| GENE 23 24098 - 24880 264 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 10 250 1 238 242 106 28 3e-22 MNSSIVSNRMKDKVCVITGGASGIGLASAKRLVAEGGVVVIADLDETKGSEVANELGGMF VKTNVADEDSVRNLFSQVIEHYERVDVAFNNAGINPNEDNSVLTTDLSVWAKVQTVNLTS VYLCCKYALEQMVKQKSGSIINTASFVALMGAATSQISYSASKGGVLSMSRELGVQFAKK GIRVNALCPGPVNTPLLRELFAKDPVQAQRRLVHVPRGRFGEPEEIAAAVAFLASDDASF VNAATFTVDGGISAAYVTAE >gi|294970644|gb|ADNU01000070.1| GENE 24 24967 - 25689 115 240 aa, chain + ## HITS:1 COG:mlr6905 KEGG:ns NR:ns ## COG: mlr6905 COG0518 # Protein_GI_number: 13475751 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Mesorhizobium loti # 4 195 13 201 243 109 34.0 5e-24 MHTRIVLIEHENGTGPQRFGRWLQDAGAQTEVIRPYKGEKVPEPETFLKGGDGLIVLGGA ASACEDAQNPWFRATKKLLVASAEGYFPSLNICLGGQMLAVATGGGIRKRPHPQYGVYTI TPLAPCEDDPVWSCLAPSTPVILYHGDEIILPQGATHLASGSDSPNQLFRIGRCAWGTQF HPESTGNQLATWFASNQDASVGSAEIVRAVKAHENEIETAMRPVAEAFVRYCREFREALV >gi|294970644|gb|ADNU01000070.1| GENE 25 26032 - 26421 344 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396477|ref|ZP_06806638.1| ## NR: gi|295396477|ref|ZP_06806638.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 129 1 129 129 136 100.0 4e-31 MSFAPVRFVSAATLAVALLVTGSVATSAPAEAAPRAKKCAVSVSKKNPKQFSTTSVNVSK VGKEAKVSVSAKYKTTTNTKRTAANSRGKATVKYNVYGATPNRKVNVTVVATKGKSRWVC STSFTPRRR >gi|294970644|gb|ADNU01000070.1| GENE 26 26551 - 26757 247 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVATLFVVDYFLIGFIAFAVLLALVFIVGVLLIIFVLPGRSAARRRRDRRNYRRRKLTEF VFDVLDRG >gi|294970644|gb|ADNU01000070.1| GENE 27 26937 - 29549 1441 870 aa, chain + ## HITS:1 COG:Rv3080c_2 KEGG:ns NR:ns ## COG: Rv3080c_2 COG2909 # Protein_GI_number: 15610217 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Mycobacterium tuberculosis H37Rv # 19 740 1 701 770 315 32.0 3e-85 MTPDAKPPTVTTRFRPPTPVRNEVIRASLVDRIDAIDPRFVVIHAPAGYGKSTLASQWLR ILNSRKRCTVWLGLDADDNNPAWFLAHLGEALAQVINTSGVDIRSVYEEHPDDVERWVLP IFINLIEQQPRKVTVVLDDWHLVDNPRCHGIVEWLCEHAGERLQLVITTRALAGLPLARL RLTGQLCEVSADELRFDSSELEAFLADQNTLTLGGKERNQLLTATDGWAAGLQLAVLGMQ RNTDVESFLGNLSNPHSDITSYLTNSVFDELSSERLNTLLILSVPDKITTELAHVLLDSV DLPTCGNLDDILYRIAQDNLFLQALDTEADWYRFHHMFLDQLRRRFARIDNELLQELRLT AAQWLSDNGHPSDAVSMCLAANNTEAAVAKVREHAMTLVEHSRMSTLLALCAKLPPSTYQ TDPTIQFSLAWANCLLHRARDAQTSLDRLANQELDRPARIEWRVIQACIDMYADHPRAGR DIEEECFAQAAELRPWVVSVLANIVAFRHLRAQQPSLALKVQQWARRFHDETVGPFSVVY GYLFESLALNAQGHSHDAVETARLALQVAKDRAGDLSHAARLAGAVTSFLSWPHGSTEQA ESLAHACCELGTEGGVVDFMAAGYSTLARLQYADSRIEEAKATLDNSIDVARKLELVRLE ALMHAERAYLRLPQEKSASLYTASETCLPVRFDVAVPAVLAQAVNAFNARPDHKENSTSS AQGHEKLNAQLQLMAEHAQRCGNVAETSLIQAIAGLLAENSDTHDHRPEPHVPVNLRGID HLLPPIAGTHIDVIETTDEAESHTQSLQMSERETQILQLLASGKSNRQIADSVFLGVNTV KWHLKNLYRRLGVSNRDDCVKVARQRGMVA >gi|294970644|gb|ADNU01000070.1| GENE 28 29596 - 30099 587 167 aa, chain - ## HITS:1 COG:jhp0631 KEGG:ns NR:ns ## COG: jhp0631 COG4647 # Protein_GI_number: 15611698 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetone carboxylase, gamma subunit # Organism: Helicobacter pylori J99 # 3 165 4 165 166 201 61.0 6e-52 MAFTKEKVRDLINGTIDDDTYQQMLTRPKDNERFFTYVEILQEQVPWDDKIILPLGPKLF IVQQPDDKRWVIKSWSGHVFCNWNENWKMHALIRVRDTQEKMEELYPKLMAPSVEWQVIR EYIDPTSGDLLDVEAPVPWYPVIHDFEPDIDTFYTEWLGVDVPERSN >gi|294970644|gb|ADNU01000070.1| GENE 29 30164 - 32494 2295 776 aa, chain - ## HITS:1 COG:HP0696 KEGG:ns NR:ns ## COG: HP0696 COG0146 # Protein_GI_number: 15645319 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase B/acetone carboxylase, alpha subunit # Organism: Helicobacter pylori 26695 # 18 776 4 764 765 1050 64.0 0 MTATLNSHTDSSTSAEGIVYGGETLKAHRDRVMDATRSTGHYAGLEHSELRSSDPILYNK IFSRLRAGVVDARETAKKIAASPIVEQEGELCFTLYNAAGDSILTSTGIIIHVGTMGAAI KYMIENNWEGNPGIQDGDIFCNNDCMTGNVHPCDIHTLVPIFWEEKLVGWVGGVNHVIDT GSVGPGSMSTGQVQRFGDGYSITCRKIGANDTLFRDWLHESQRMVRTTRYWMLDERTRVA GCHMIRDLVHEVIRSEGLDAYWKFSYESIEHGREGLQNRIKAMTVPGTYRQTAFVDVPFE HEDVRLPSDFAKVNTIMHAPSEITIRPDATWRIDFEGASRWGWHTFNANPVSFTSGIWVM MTQTLIPSEMVNDGAAYGTEFRLPKGTWTNPNDRRVAFAYSWHFMVSAWSSLWRGLSRGY LGRGLLEEVNAGNANTSNWLQGGGFNQYNEIHAVNSFECAANGVGATASRDGISHAAAMW NPEGDMGDMEIWELAEPLIYLGRQIKAGSGGAGKYRGGCGHESLRLVHNATDWTMFFMGN SHITSDWGLMGGYPAASGYRFAAHKTGIKELIESGAEFPIGGDFDPEFPTYDSLIPDAQI KRDKQAVTTEETFENYDLYLNTMRGGPGFGDPLERSPQAVVDDMNGGYVIPRLMKNVYGV VATEEDGVWTLDEEGTKELRAQMYKDRLAEAKPVSEWMKEERERIVNKDAAIAVQLMYAQ SFKLGERFHAHFRDFWSLPDDWEMLEEDLPVPSFGREMAMDITELPDVKMPKYVDE >gi|294970644|gb|ADNU01000070.1| GENE 30 32526 - 34679 2131 717 aa, chain - ## HITS:1 COG:HP0695 KEGG:ns NR:ns ## COG: HP0695 COG0145 # Protein_GI_number: 15645318 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase A/acetone carboxylase, beta subunit # Organism: Helicobacter pylori 26695 # 10 717 6 712 713 1008 67.0 0 MAPESTTHDVEVLGIDAGGTMTDTFYVDSDGDFVVGKAQSNPDDESVAILNSSADALAPW GITDLNDAIGNLVTGVYSGTAMLNRVVQRKGLRCGLIVNKGTEDHHRMGRAIQSHLGLAY PDRIHINTHWYDPPLAKREHTYGVVERVDMFGDVVIPLREESAREAARALIADDVESIAI SLLHSYKNPDHERRVRDIVLEELEKAGKSIPVFASADYYPLRKESHRTNTTLLEAYAAEP SRKTLQKISDAFKNHGAKFDTRVMATHGGTISWKAKELARTIVSGPIGGVIGAKYLGEVL GYDNIVCSDIGGTSFDVALITRGELTIKNDPDMARLVLSLPLVGMDSVGAGAGSMVRLDP YTKAIKLGPDSAGYRVGVCWADSGIDTVTVSDCHLVLGYLNPDNFLGGLITLDVERARQA VKEQIADPLGLSVEDAAAGVIEILDTELRDYVKSLVSGKGYNPESFVCFSYGGAGPVHTY GYTEGLGFEDTLVPAWAAGFSAFGCASADFAYRYDKSLDLNIDEDAPDEEKVKNAQTLQE AWAELTQNVLEEFKLNGYTPDQVELTPGYRMQYRGQLNDLEIDSPIKSASSAEDWDSLVE AFNDTYGHVYAQAARSPELGYSVTGAIMRGKVDIPKPKIPSEELAGPEPDEDAKLGTRQF YRKKRWVDAQLYEMEKLRPGNEITGPAIIESDATTFVVPDGFSTYLDKHRIFHLKEV >gi|294970644|gb|ADNU01000070.1| GENE 31 34875 - 35330 418 151 aa, chain + ## HITS:1 COG:no KEGG:Achl_2739 NR:ns ## KEGG: Achl_2739 # Name: not_defined # Def: hypothetical protein # Organism: A.chlorophenolicus # Pathway: not_defined # 1 147 1 150 153 149 56.0 3e-35 MSVNTDLQGSSYRLENPVEVGQEKIAEFARAVGATHPSHFDAQVAKDLGYGAQVAPPTFP VMIAQRAEALYIASEEAGIDFSRVVHGQEQFTYTRPVVAGDLLNAECFVDGIREAGGHAM ITTRTELTDARTDEPVVTVTSTIVVRGGEDA >gi|294970644|gb|ADNU01000070.1| GENE 32 35323 - 35796 528 157 aa, chain + ## HITS:1 COG:MT0665 KEGG:ns NR:ns ## COG: MT0665 COG2030 # Protein_GI_number: 15840039 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mycobacterium tuberculosis CDC1551 # 16 154 7 139 142 96 39.0 2e-20 MPNITPNVQVEAGLASTLEVGQEVLTATVELSRADLVKYASASGDFNTIHWNERFAKEVG LDNVIAHGMLTMATAITPLTDWLGDPGAILNYRTRFTNPVVVPDAESGSPEQPTVTLTSA IRVGAIDAEAGTARFDIDVKVDDTAVLGRTQVKACIK >gi|294970644|gb|ADNU01000070.1| GENE 33 35793 - 36869 775 358 aa, chain + ## HITS:1 COG:MT0500 KEGG:ns NR:ns ## COG: MT0500 COG0812 # Protein_GI_number: 15839872 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 3 358 21 369 369 273 47.0 3e-73 MNLSELTTLRVGGPAPQLTTVTTRDQLIQFCSEHPLSPGYDPVLFIAGGSNLLISDDGFA GPVCLIRTQGITETPGENEHARVRAQAGVTWDEFVKHTVDSGLSGLEALSGIPGSVGATP VQNVGAYGAEVAELICSVTLFDRVEGEVRECAPDELEFGYRTSLLKTSAAQLGQPRYIVL DVEFELERAGESAPVRYGQLAAALGVEIGESAPLAEVREAVVRLRASKGMVLNPEDHDTW SAGSFFTNPILPANPGPGDPRVPEGAPTYPVRNPTTGEVDETVVKTSAAWLIDHAGFDKG FALNDRASLSTKHTLALTNRGQARAQDIVELARHIRDGVARTYGITMHPEPNFVGCQI >gi|294970644|gb|ADNU01000070.1| GENE 34 36879 - 37934 852 351 aa, chain - ## HITS:1 COG:AGc218 KEGG:ns NR:ns ## COG: AGc218 COG1816 # Protein_GI_number: 15887491 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 113 322 108 305 325 125 36.0 2e-28 MVNDLAPVTTEQLNLLPKAHLHLHFTGSLTVDKLQELAQARNVRLPRVLMRHDPMRLSPD RRGWFRFQRLYDSARTVVQGEDALRAVVANAAKLDKAEGVRWLELQVDPTGYAGKMGGIT PALEVVLDEARNQSDETFGVAIIVAASRMKHPLDARTLARLAAQHAGNGPGTVVGFGLSN DERSGDTATFAPAFRIASNAGLASFPHGGELLGPDHIRTTLDALNPTRLGHGVRAAEDPQ LLGALVSRGVGLEVCPSSNASLGVYPTAEDVPLRTLVRAGAKVALGADDPLIFGPRITEQ YAIAQRMGFTTSELAQLARDSFTISTAPRHIVTRAHADIDAWEARVIGHSH >gi|294970644|gb|ADNU01000070.1| GENE 35 38187 - 38447 241 86 aa, chain + ## HITS:1 COG:no KEGG:RSal33209_0986 NR:ns ## KEGG: RSal33209_0986 # Name: secE # Def: preprotein translocase subunit SecE # Organism: R.salmoninarum # Pathway: Protein export [PATH:rsa03060]; Bacterial secretion system [PATH:rsa03070] # 3 78 16 91 98 67 51.0 1e-10 MAESGKGTEAVDHKRRGFFGTIARFFAEVMSELKKVVTPTRKELINMFGVVLGFVVVMIV IVLTVDFVFGKLVGFAFARTPIWPLW >gi|294970644|gb|ADNU01000070.1| GENE 36 38497 - 39309 980 270 aa, chain + ## HITS:1 COG:ML1906 KEGG:ns NR:ns ## COG: ML1906 COG0250 # Protein_GI_number: 15828020 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Mycobacterium leprae # 73 270 31 228 228 201 57.0 2e-51 MSENISEADETAQSAEATEVAETAQAEEVNAPADSATETSADETNVENTSGAESADDSNA EGASDAREEFLRELRMKEGDWYVIHSYAGYENRVKANLENRTVSLDMEDYIFEVQVPMED VVEVKNAQRKTVRRVRIPGYVLVRMELTDESWGVVRHTPGVTGFVGNAYDPIPLTMDEVV SMLAPVIEEHEAARAAEEGEARKAAEAASGSEIVVEFEVGETVMVKEGSFEGHPATIQEI RPEQQKLTVLLSIFERDVPVELGFGQVSKI >gi|294970644|gb|ADNU01000070.1| GENE 37 39488 - 39925 631 145 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229821641|ref|YP_002883167.1| ribosomal protein L11 [Beutenbergia cavernae DSM 12333] # 1 140 1 140 143 247 85 9e-65 MPPKKKVTGLIKLQIQAGAANPAPPVGPALGQHGVNIMEFCKAYNAATENMRGNIVPVEI TVYEDRSFTFITKTPPAAQLIKKAAGLKSGSATPHTVKVGHLTKDQVREIAETKMPDLNA NDIEAASKIVAGTARSMGITTDVEV >gi|294970644|gb|ADNU01000070.1| GENE 38 39985 - 40680 1019 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62424444|ref|ZP_00379590.1| COG0081: Ribosomal protein L1 [Brevibacterium linens BL2] # 1 230 1 230 232 397 86 1e-109 MAKRSKAYLAAAEKIQAETYYEPTQAVALAKETSVAKFDATVEVALRLGVDPRKADQMVR GTVNLPNGTGKTAKVLVFAAGDRAEAAREAGADYVGSDDLLEKVAGGWTDFDAAVATPDM MGKVGRLGKVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGKIEFRVDKHSNLHFIIGKVSF TEEQLQQNFKAAMDEVLRLKPSSSKGRYITKATVTTTNGPGVPIDTSDLRA >gi|294970644|gb|ADNU01000070.1| GENE 39 40605 - 40796 82 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSERELLARERDRANGNSYPKHKSAPNQKPVRGTLKEASYARRSEVSIGTPGPFVVVTVA LVM >gi|294970644|gb|ADNU01000070.1| GENE 40 40889 - 44938 4219 1349 aa, chain + ## HITS:1 COG:HI0712 KEGG:ns NR:ns ## COG: HI0712 COG1629 # Protein_GI_number: 16272652 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Haemophilus influenzae # 1099 1160 15 76 1084 67 43.0 2e-10 MHRSSRLSAAVLATALVGTLTPAVTAFGTPASAHATVAADRGTADVRVFQDRDHDKQYDD GEPPLQPTYLNKTLTLKNKATGKWYVISPDNLKKFGLPAGDYTLYVEMNSTFGHYAIVDT ATGKRLPDTMLKMNVPATRIGDKGQEITNGVTAGYGRHSYTDITLEAGKPLDLSYAASSI GANVSAVETKDGAEVAAPDAVSVAFKDGSASVKSSNVDGVYWAGKGDAAWDKHLFASGKV TARISPKINYAVDKVEARFHQQEDGAYNIDKLSDPLKVTADPANHTYTVDSSDSGEAWGD FEYKAFLKPVEIGKATVRLFGDENVDNKYSGPEEKVSESYINLVDENGRWFKVEPESLEK QGLPAGEYTAYVRNASVADGFGVVVDSATGKRMETVSLDESHDATYVDADTGETLPTVTD KGRFVKTTFTVAPDKETVVDMASTRIDASAKVTVDGEAADSKVYFKDGETRLESFVSKTS TTTEHLASDDADKKTRHFFSEEWVTVGVEGIDGHKVKGVTVGGLAGGKTVDAEKVSDTEY RVKRSVLGDDFGRLKFDVQLEKVAPTGKVNFRLFGDENLNNSFDEGTDEVVDRYVNLVDE EGNWYKVMPEALAQQGLPAGKYTVYMRDASVADGFGVVVDSGGKRLPFAKLEGKKDATYI DAKTGEKAETVTDEGTFVTTEIEVKENETVEANFASTRIDATAKVTADGEAVDSKVYFKD GDQRLETYKSDSVGYVASDDAGAKTRHFFSEEWVTVGVEEIDGYTVKGVTVRGFGGGKTV EAEKVSDTEYRIKRSEMGDDFGRFEFDVQLEKVAPTGKVDFRLFRDENLDNKYSGDAEEV HGGYVNMVDEDGNWYKVKPDSLARQGLPAGKYTVYMRNNSVADGFGVVVDSEGKRLPFAE LEGGEKATYIDPDTGKKVETTTDRGRFVTTEIEVTENETVEANFAFTRIDASAKVNKDEV ESVYFKDGDQRLDAFETESVGFMASDDAKAKKRHFFSGDKVTLGVNVKEGRKVTKVEVKP SATRGGETIVLFDETSGGANAGVEAVAPGAALSMGVTTQVRVAAVNAGTVPVLNAAVANA GAQEFSVDRSKMGDDFGRFEFVVTTAPVEEPTPEPTEEPTPEPTEQPTDEPSENPTEAPS EQPTEEPTEEPTENPTDAPSEEPTEEPTEEPTENPTDAPSEEPTEAPSEQPTDEPSEEPS EQPTDAPSEQPSDEPSEQPTDSPSEAPSEEPGEEPSEEPGEDPTDAPSEDGDDETPGEDG ESGDGDNGESDGGDTDAGDEEAENEGDASDNNTDNGGSDNNTDSGNKGNDSSKDNGALPR TGVNVGVSLAVGVALVALGAGLVFRRRKN >gi|294970644|gb|ADNU01000070.1| GENE 41 45102 - 45860 502 252 aa, chain - ## HITS:1 COG:MT1964 KEGG:ns NR:ns ## COG: MT1964 COG0491 # Protein_GI_number: 15841385 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis CDC1551 # 7 214 26 227 250 65 30.0 7e-11 MALNSYLILGDERAVIVDTGSGPRQASRILTTFAEVSLTQSGRALFVDLPVSVVNTHDHW DHFFGNATFARAGVTEFFASPQCIRDMQASAWVQFHEVPSDFEPDLPADPSELLVPMAEV TDGVTLNDLGVGFEDLDVTARVLPGHTEGDLVLIAGHVALVGDLVEEGAPPALGDDATPS RWAQNLERLLEDPQLTVFAPGHGRPVDREYVTRQAGVIAQAGLEDAEVAALPFSRDLTLA TPGLPEGVARIL >gi|294970644|gb|ADNU01000070.1| GENE 42 46233 - 46769 615 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62424440|ref|ZP_00379586.1| COG0244: Ribosomal protein L10 [Brevibacterium linens BL2] # 1 178 1 177 177 241 71 7e-63 MARPDKAAAVQEIKQLFENSSAAVLTEYRGLTVAQMKELRVALGGNASYAVVKNTLTAIA AKEAGLEAFNADNLKGPTAIAFISGDVADAAKALRDFAKANPQLVIKGGHLEGAALSAEE VTKLADLESREVLLAKAAGALKGSLYKAAYAFTAPLVKTVRTVDALRAKQEESGSEAA >gi|294970644|gb|ADNU01000070.1| GENE 43 46827 - 47216 491 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239918209|ref|YP_002957767.1| LSU ribosomal protein L12P [Micrococcus luteus NCTC 2665] # 1 129 1 129 129 193 76 2e-48 MAKLTPEELIEAFKELTLIELNDFVKKFEEEFEVEAAAPVAAVAAAPGAGGGDAGAAEEK DEFDVILESGGDKKVPVIKEVRGLTSLGLKEAKELVDGAPKPVLEGVNKETAEAAKEKLE AAGATVSLK >gi|294970644|gb|ADNU01000070.1| GENE 44 47417 - 48616 1159 399 aa, chain + ## HITS:1 COG:Cgl2078 KEGG:ns NR:ns ## COG: Cgl2078 COG0620 # Protein_GI_number: 19553328 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Corynebacterium glutamicum # 4 398 6 400 401 440 53.0 1e-123 MSSIRVSHAGSLPRTEQLIAANAARFDENFNNDEFQRLLQESVVDLVAKQKELGITDVND GEYGHAMAAAKDYGAWWHYSFERTGGLELREQTLFEGPAVRSEPGNLQLTSFGDRRDRHI FPGVYSDQESGADTGKQPKFPAANGPVTYIGQDKVQRDIENLRVACGKAGVDPSTAYINS LGPSSAARITNEYYDTDEEFIWAMADVFREEYLAITEAGFIVQIDDPSIAENFDQINPEP SYEDYRAFTRPRIEALNHALRGIDPQRVRFHTCWGSWHGPHVTDLPFAEIVNDVLGINAA GITFEAANVRHEHEWRIWEDTKLPEGKYLIPGIVSHSTNVVEHPELVADRIERFARLVGP ENVVASTDCGLGGRIHPEIAWAKLETLAQGAEIASKRLS >gi|294970644|gb|ADNU01000070.1| GENE 45 48762 - 49808 1338 348 aa, chain + ## HITS:1 COG:Cgl0423 KEGG:ns NR:ns ## COG: Cgl0423 COG1840 # Protein_GI_number: 19551673 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Corynebacterium glutamicum # 49 347 58 358 359 314 55.0 2e-85 MKPLFRNARSATRGTALVSALVVSTLMFTACDVSNAGNGGDKAEGSGEINLYTSEPEAKI NEVIEAFNEENPDIQVKVFRAGTGELKTRIASEKKSGKIGADVLLAADVPTFEGFKSEDE LVKLDKVETDGIEKEQVDADGYYVGTRIIPTVIAYNTDKVKEAPKSWAELTDSKFKDQIA MPNPEVSGAAAFNTALWLDQPELGEDWLKKLGENKPKVLESNGPVAQAVADGSSPVGIVV DYPVRDLADKGSPVAVSYPSDGVPYVNQPAGVFKDSKNPEAAQAFVSFLVSKEGQELAVK QNYVPVRSDAGAPEGAPALTDINLIQPDYAKVKEQQDGAVEKFKEIMG >gi|294970644|gb|ADNU01000070.1| GENE 46 49805 - 51487 1314 560 aa, chain + ## HITS:1 COG:Cgl0422 KEGG:ns NR:ns ## COG: Cgl0422 COG1178 # Protein_GI_number: 19551672 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Corynebacterium glutamicum # 35 557 1 524 525 366 45.0 1e-101 MSLTHHSPDSRTTTSAHNSSRAKVWRESGLRVPGLRLAVWAAVLVTIALPLTAVVSTGLS SAGLQTLRNPDLLTAVLNSLVSSVCAALGATAVALVLTIALDRFKVPGATALRWLFLLPF LIPPFISAMSWIALFSPSGPLRSLLGTVLPSNIYGAGGVILLLTITSWPMAYLLISSAMA RIPSQLEEAARVSGASTARIYATITLPLLRPALMASLVLTFASNLSDFGIPALLGLPANY TTLTTLVYRFIASHSVLNPLPAASAVGTLLLTLACLAVFVQRSVGTTSAAASTRPTQPAA RTPLMWALTVILWVGALITTVLPLLALIRQAILPAPGVPLRADTVTFANFTHALSNPSVL SGVGNSVLLALGAGVVCTVLGWAVALLLTRTRSFDNVGLDIFALLPQALPGLVVAVAWLL VSPLLGIFNTLWAILAAYVMAFSAIVVQMVRPTSAALSRSFEEAAQTAGASPTRALLTTS GRFTFPIAITGGVVVALTAVRELTISILLVAPGTRTLGVVIFNLQQAGDYSAASALAVLV CLVGILGLGLVTASNRKAKA >gi|294970644|gb|ADNU01000070.1| GENE 47 51484 - 52560 813 358 aa, chain + ## HITS:1 COG:Cgl0421 KEGG:ns NR:ns ## COG: Cgl0421 COG3842 # Protein_GI_number: 19551671 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Corynebacterium glutamicum # 1 251 1 248 350 252 54.0 8e-67 MTALELNDINVRYPGGGGLFDISLAADTGEFICLVGPSGSGKTTLLRTVAGFLRPVSGGM RINGAEVVSDSAFVGPDKRGLGMVFQDHAVWPHMSVGENVAYPLKVSGLKGAEVRDRVAQ TLTQVGLTGMADRKPDSLSGGQRQRVAIARAIIAKPNVVLFDEALSSLDEPLRADLRGQL KALTEELSLTAVYVTHDRSEALALADRIAVLNAGRIIQYSDPQQVLNAPQDPFVAQFMSD AGLFPVTVAGGDSGGGRGDDGVVVLENGSRVTGFTRMHAEVDPVLAVGDGDARVCPAGEG HVDGTVESVLFDRAGWCMQVRVWDQALTVLSAGDRPRVGDTVGVMFTSGTLFTRESSR >gi|294970644|gb|ADNU01000070.1| GENE 48 52580 - 53215 582 211 aa, chain - ## HITS:1 COG:no KEGG:DIP0066 NR:ns ## KEGG: DIP0066 # Name: not_defined # Def: hypothetical protein # Organism: C.diphtheriae # Pathway: not_defined # 1 211 1 211 211 332 94.0 4e-90 MASTLRRCLLTVLPRSKEIDVKRAAIAVAALALALTGCSAAEPEPTADGTVSQDTFLTSH GLADMDAVEIIDHLDRQKVTERPTDLIASVRADELLLSSDDQEVVVDLPDNQTYVSIAPY LTSTHDCFYHSLTTCLGELDNEDIQVTITDEATGEVLVDEATTTFDNGFIGFWLPNDATG LIEVSYQGRTGTTEFSTTDDGATCVTDLRLT >gi|294970644|gb|ADNU01000070.1| GENE 49 53559 - 54281 550 240 aa, chain + ## HITS:1 COG:Cgl2904 KEGG:ns NR:ns ## COG: Cgl2904 COG0745 # Protein_GI_number: 19554154 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 239 1 239 240 429 97.0 1e-120 MADHTPTTATPPGRVLVVDDEQPLAQMVASYLIRAGFDTRQAHTGTQAVDEARRFSPDVV VLDLGLPELDGLEVCRRIRTFSDCYILMLTARGSEDDKISGLTLGADDYITKPFSIRELV TRVHTVLRRPRTSTTPAQVTTPLIVGDLILDPVAHQVRVGETTVELTRTEFELLVALALR PGQVLTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTRGRGFIDTVRGVGYRVGQS >gi|294970644|gb|ADNU01000070.1| GENE 50 54278 - 55405 811 375 aa, chain + ## HITS:1 COG:Cgl2903 KEGG:ns NR:ns ## COG: Cgl2903 COG0642 # Protein_GI_number: 19554153 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 1 365 1 365 399 609 95.0 1e-174 MNHGPGLTFRFLTAQVLVVVISLLVAAAVATMVGPTLFHDHMLMAGRKDPSLELFHAEQA YRDANLITLAFALPTALISALLASLWLSRRLRTPLQDLTRAATSLAAGNSRIRVPAGEAG PEVATLAHAFNTMADRLEHTEQVRRQMLSDLAHEMGTPLSVLTVYLDGLQDGVVDWNNAT HTIMADQLTRLTRLMGDIDDVSRAQEHRIDLDLAEEGLGDLLHTAAAAAGEAYADKGVDL QVETITDTARVVVDRQRFGQVMSNLLSNALRHTPAGGQVRISVHRQGASTALIHVADDGE GIPPGQLGHIFERFYRGDAARSRDNGGAGIGLTISKALIEAHGGTLTATSPGPGRGAVFV LRLPLSPPDSEEAAR >gi|294970644|gb|ADNU01000070.1| GENE 51 55515 - 55841 191 108 aa, chain + ## HITS:1 COG:Cgl2901 KEGG:ns NR:ns ## COG: Cgl2901 COG2608 # Protein_GI_number: 19554151 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Corynebacterium glutamicum # 30 108 1 78 78 81 64.0 3e-16 MITSPPRLLPTASHGCSCCGPASRADTASIPATSDSSARGSTPSYQVTGLTCGYCVKSVT QALQALPQVDDVQIDLVASGVSTVTVTGVVPPEMVRRAIEEAGYTVLS >gi|294970644|gb|ADNU01000070.1| GENE 52 56104 - 57184 1094 360 aa, chain + ## HITS:1 COG:Cgl2900 KEGG:ns NR:ns ## COG: Cgl2900 COG2217 # Protein_GI_number: 19554150 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 1 356 67 422 739 554 89.0 1e-158 MFRERFWWSLILSIPVVIFSPMVAQLLGYRLPAFPGSTWIPPVLGTIIFVYGGTPFLKGG WKELKSRQPGMMLLIAMAITVAFVASWVTTLGLGGFDLDFWWELALLVTIMLLGHWLEMR ALGAASSALDALAALLPDEAEKVIDGTTRTVPISELVVDDVVLVRAGARVPADGTILDGA AEFDESMITGESRPVFRDTGDKVVAGTVATDNTVRIRVEATGGDTALAGIQRMVADAQES SSRAQALADRAAALLFWFALISALITAVVWAIIGSPDDAVVRTVTVLVIACPHALGLAIP LVIAISTERAAKSGVLIKDRMALERMRTIDVVLFDKTGTLTEGAHAVTGVAATVGVTEGE Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:10:58 2011 Seq name: gi|294970624|gb|ADNU01000071.1| Brevibacterium mcbrellneri ATCC 49030 contig00106, whole genome shotgun sequence Length of sequence - 16200 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 1, operones - 1 average op.length - 19.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 54 - 1580 1275 ## COG0469 Pyruvate kinase 2 1 Op 2 3/0.000 - CDS 1610 - 2680 911 ## COG0682 Prolipoprotein diacylglyceryltransferase 3 1 Op 3 37/0.000 - CDS 2677 - 3471 327 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 4 1 Op 4 13/0.000 - CDS 3468 - 4661 962 ## COG0133 Tryptophan synthase beta chain 5 1 Op 5 . - CDS 4687 - 5463 649 ## COG0134 Indole-3-glycerol phosphate synthase 6 1 Op 6 . - CDS 5460 - 5738 314 ## gi|295396512|ref|ZP_06806672.1| conserved hypothetical protein 7 1 Op 7 . - CDS 5811 - 6284 331 ## gi|295396513|ref|ZP_06806673.1| conserved hypothetical protein 8 1 Op 8 . - CDS 6281 - 7810 1313 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 9 1 Op 9 24/0.000 - CDS 7788 - 8126 262 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 10 1 Op 10 . - CDS 8123 - 8884 811 ## COG0107 Imidazoleglycerol-phosphate synthase 11 1 Op 11 . - CDS 8884 - 10386 1402 ## COG0777 Acetyl-CoA carboxylase beta subunit 12 1 Op 12 . - CDS 10383 - 11561 1186 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 13 1 Op 13 . - CDS 11558 - 11965 385 ## Xcel_1732 hypothetical protein 14 1 Op 14 3/0.000 - CDS 11985 - 12839 629 ## COG0040 ATP phosphoribosyltransferase 15 1 Op 15 . - CDS 12851 - 13114 306 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 16 1 Op 16 . - CDS 13124 - 13789 616 ## COG3201 Nicotinamide mononucleotide transporter 17 1 Op 17 3/0.000 - CDS 13789 - 14442 618 ## COG0036 Pentose-5-phosphate-3-epimerase 18 1 Op 18 . - CDS 14446 - 15930 1134 ## COG0144 tRNA and rRNA cytosine-C5-methylases 19 1 Op 19 . - CDS 15932 - 16147 216 ## gi|295396525|ref|ZP_06806685.1| methionyl-tRNA formyltransferase Predicted protein(s) >gi|294970624|gb|ADNU01000071.1| GENE 1 54 - 1580 1275 508 aa, chain - ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 2 473 5 473 477 476 55.0 1e-134 MRHAKIVATLGPKQDTYEAIRSLIDEGADVLRFNFSHGTHEDHQRRYDWARRAAQETGRA IAILIDLQGPKIRLGQFETPDPIPLERGDRFTITTRDVVGTREVCGTTYKKLPADVEVGD PLLIDDGRVRLRAIEVTGTDVVTEVEVPGNVSNHKGINLPGVPVSVPALSEKDIEDLRFG LHMGADWVALSFVRDAQDAAYVRQIMAEEQIWIPVIAKLEKPQAVDCLRDVVGAFDGIMV ARGDLGVELPLEQVPIVQKRAIELCRRQAKPVIVATQMLESMIEESRPTRAEVSDCANAV LDGADALMLSGETAVGTYWKEAVRTMGAIIESTEAHGLERVPPLGTEPHTRGGAITAAAV QIARQLKIDLLCTFTQSGDSVRRMSRIRADKPILAFTPDVRVRHQLALSWGVRTFLVNPM RHTDEMARQVDEILLSSGLAEDGQLCVIVAGSPPGISGSTNALRVHAIGDTIKGVAPVYR EDPDRNQIGGYGEIPEPSTGSVRVVREE >gi|294970624|gb|ADNU01000071.1| GENE 2 1610 - 2680 911 356 aa, chain - ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 4 263 6 272 316 239 48.0 5e-63 MNGIPSPTWSGFSLGPLTIHAYALCILTGIVVALWLTNKRWIARGGTSDDLWNIAVWTVP AGIIGGRLYHIFSTPAPYFGPGGDPIAALYIWNGGLGIWGAVALGVLVAYFVARYYGIRF LSFIDAAAPGLILAQAIGRWGNWFNQELFGAPTTLPWGLQIDPASPNWPDPSLPPDTLFH PTFLYESVWNVIGAALLIWAGKKFQLKHGQVFYAYICYYTLGRVWIEALRIDTAEHVLGL RLNVWTSILVFALGAVLFIVSRKRYGAGKDIAHTRERVAYDVAVKSHDNPEDFPPYTRGA TAPGVREVGFGPQTMSLPIVQEEDVVSDKSFGFYGAVTSTISIVPQVPDKQGDQKR >gi|294970624|gb|ADNU01000071.1| GENE 3 2677 - 3471 327 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 244 1 245 263 130 34 6e-30 MTAVSELLSTVANQGRNAALIGYLPVGYPTVDESIEAMVALAKNGCDIVEVGMPYSDPGM DGPVIQHAAETALENGVRTEDLFRAVSAVAEAGALPVVMTYWNIVYQYGVEAFAKRLHES GGAGIITPDLIPDEAHDWIDAAGRYDLGRIFLAAPSSTPERISTIVNSSSGFVYAASTMG VTGTRDTVDSHARDLVERLKTAGAQHVCVGLGVTNAQQVAELAEYADGVIVGSALVKALT AGGPEAVGELTASLYTGTLKEPSA >gi|294970624|gb|ADNU01000071.1| GENE 4 3468 - 4661 962 397 aa, chain - ## HITS:1 COG:MT1647 KEGG:ns NR:ns ## COG: MT1647 COG0133 # Protein_GI_number: 15841065 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Mycobacterium tuberculosis CDC1551 # 2 390 28 419 422 526 68.0 1e-149 MGPYFGDFGGRFISEALVPALDEIDEIWQKALVDPEFTDELRRLQAEYVGRPSLLTEATR FSEHCGGARVFLKREDLNHTGSHKINNVIGQALLTKRMGKKRVIAETGAGQHGVATATAA ALFGLECTVYMGYEDTQRQALNVARMRLLGAEVVAVKNGTATLKDAMNEALRDWVANVAD THYLIGTVAGPHPFPAMVRSFQRIIGDEAREQILEATGQLPDAVCACVGGGSNAMGIFAA FLDDTDVKLFGFEAGGDGVETGRHAARFSGGRPGVLHGSKTYILQDEDGQTLASHSVSAG LDYPSVGPEHSHLFETGRAVYEPVVDDEAMEAFKLLSRTEGIIPAIESSHALAGAMRVGK RLGPEATLLVNLSGRGDKDMTTAAKWFNYIDEGATQA >gi|294970624|gb|ADNU01000071.1| GENE 5 4687 - 5463 649 258 aa, chain - ## HITS:1 COG:Rv1611 KEGG:ns NR:ns ## COG: Rv1611 COG0134 # Protein_GI_number: 15608749 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Mycobacterium tuberculosis H37Rv # 2 256 5 262 272 220 53.0 2e-57 MSVLNSIIEGVRADLAEREARISLSECKKRALDVAPALPFLPVEQFGLICEVKRSSPSKG HLAEISNPAELASQYEAGGALAISVLTEQRRFNGSLDDLDAVRAAVNIPILRKDFTVTEY QIYEARAHGADLVLLMASALNNAQLKDFYALSTDLGMTALVETHTLEEMERVRALDAGLI GVNARNLKDLTVDTARVAPIMRQAPQGTTLVAESGVESVDDIRTYAQAGAHVVLCGEALV KAGDPRASVEEFTRAGRQ >gi|294970624|gb|ADNU01000071.1| GENE 6 5460 - 5738 314 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396512|ref|ZP_06806672.1| ## NR: gi|295396512|ref|ZP_06806672.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 92 1 92 92 168 100.0 1e-40 MKSQYRNGAYDLDKSTIDYEAIQDPGHGHSVAGWIPAGMVMLAAVAGTIGFVAGPFMLVW VGVALVVLAIILAPILHKAGLGPKKHHNTLSK >gi|294970624|gb|ADNU01000071.1| GENE 7 5811 - 6284 331 157 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396513|ref|ZP_06806673.1| ## NR: gi|295396513|ref|ZP_06806673.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 157 1 157 157 246 100.0 3e-64 MKRSTAVMALLVCAGIMWVLGSQNWGAEVANQTPAGVQEVGSETVTNRVGIALAAVAAVL AVLLAMMGRFGRWVVTVMYALSSIVFAVVAVAQTDAGVLRWAGLAVGVLGAGLSLFIARE SGNWTTRNKYDRDARASHEEPDAVSDWDALTRGEDPT >gi|294970624|gb|ADNU01000071.1| GENE 8 6281 - 7810 1313 509 aa, chain - ## HITS:1 COG:ML1269 KEGG:ns NR:ns ## COG: ML1269 COG0147 # Protein_GI_number: 15827651 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Mycobacterium leprae # 4 500 9 506 529 472 51.0 1e-133 MQITSLSEFTRLGEKHRIVPVYATVLADNETPLSVYRKITRGNPGEFLLESASNGAWSRY SFVGRNPLATITADNNGEVVWLGEVPEGAPTHGDPLEVVQDVLELLHAAPHPSLPPMISS LVGYLGWDIIRRIEKLGPSPLREDPLPELSMSIPGDVVIVDHYTNELTLVANVVNVNGEE SGIEAAYQRGVERVERLLEDISAPSDPCLTVHSRPAPEVSYRTAREDYLAAINEAKKRIV DGDIFQVVLGQRFDMDVDATPLDVYRMLRNTNPSQFMYIMNMPGVDGEDFSVIGSSPEAL VTVKGSTIVTHPIAGSRPRGTTDAQDAALARELLADEKERAEHLMLVDLARNDLAKVCTP GTVDVVEYMEIERYSTIMHIGSTVTGQLRDGVTGVDVVKATFPAGTLSGAPKPSALRIID ELETVSRNVYGGVVGYMSFAGDLGLAIAIRTGVMRAGRLTVYAGAGIVADSDPDSEFMES KNKAASVLNAAAAANTLESIVRRSQEESE >gi|294970624|gb|ADNU01000071.1| GENE 9 7788 - 8126 262 112 aa, chain - ## HITS:1 COG:AF1950 KEGG:ns NR:ns ## COG: AF1950 COG0139 # Protein_GI_number: 11499532 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Archaeoglobus fulgidus # 4 110 1 106 108 127 55.0 7e-30 MSDVSVSFGPDGLVPAVVQDARTKDVLMLAWMNAEALRLTLTTGKATYWSRSRQQLWVKG ETSGHTQKVVSVHTDCDADTVLLEVEQTGPACHTLTPTCFTGRRLDADHVTE >gi|294970624|gb|ADNU01000071.1| GENE 10 8123 - 8884 811 253 aa, chain - ## HITS:1 COG:ML1263 KEGG:ns NR:ns ## COG: ML1263 COG0107 # Protein_GI_number: 15827648 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Mycobacterium leprae # 3 253 7 261 261 287 65.0 1e-77 MSLAARVIPCLDVKDGRVVKGVNFMDLRDAGDPIECARVYATEGADELVFLDVTASSSGR APTYDMVNQVAEEIFIPFAVGGGIRSCDDVDRMLREGADKVGVNTAAIARPELISEIARR FGNQVLVLSADVRRSTATTSGMEVTTHGGRTGTGIDALAWLARAQDLGAGEILLNSMDAD GTKQGFDLEMIERAREVVDLPLIASGGAGAVEHFAPAIRAGADAVLAASVFHFGDFTIGD VKAELAREGIDVR >gi|294970624|gb|ADNU01000071.1| GENE 11 8884 - 10386 1402 500 aa, chain - ## HITS:1 COG:MT0927_1 KEGG:ns NR:ns ## COG: MT0927_1 COG0777 # Protein_GI_number: 15840323 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 242 1 237 242 269 62.0 1e-71 MKRLSVAELLDIVVDQGTFQSWDEEPIVPAGGISEDYAADLAAAREKSGVDEAVVTGEGM VKGRRVALVACEFRFLAGSIGVAAAERLVRAIERATAEGLPVLAGPASGGTRMQEGTVAF LSMVKITAAVHAHRKAGLPFLVYLRHPTTGGVFASWGSLGHFTVAEPGALVGFLGPRVYE QIYNQPFPEGVQTSDNLHRHGIIDGIIGPERIPETVSKVLNILMGAREVPSPVADPHTAP EVEPKDTHAWDIITASRNPDRPGVRELLRWGASDVVPLSGTSQGESDRGLLLALARFGSA PAIVLGQDRQRQRSHEPMGPAALRQARRGMALAGELHIPLVTVIDTPGAALSKAAEEGGL AGEIARSLSDLVTLKAPTVSLIMGEGSGGGALALIPTDRVLTAQNGWLSPLPPEGASAIV YRDTEHAAEMAQYQQVQAEHLKANGIADRIIAEKPDATDEPQEFVKRVASALEFEIIDLM RKPIHRRYGQRLDRYRALGL >gi|294970624|gb|ADNU01000071.1| GENE 12 10383 - 11561 1186 392 aa, chain - ## HITS:1 COG:SMb21182 KEGG:ns NR:ns ## COG: SMb21182 COG1804 # Protein_GI_number: 16264596 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Sinorhizobium meliloti # 1 355 1 356 394 289 44.0 9e-78 MTGPLTGYTVVDLSRALAGPHAGQLFGDMGARVIKVENPAAGDDTRSWGPPFVGPEDNPQ ATYFLSCNRNKESIALDLKSEDGKDILTKLIRKADVLIENFRVGVLARLGFSTEQLHEIN PRLVILQITGFGHDGPEAMRAGYDQIAQGEAGLMSLTGPDKDNMQRVGVPIADLLAGIHG TLGVVAALLERERTGQGKVVRTSLISGMVGVHAFQGTRATVAHETPLPGGNHHPSISPYG MFNCQDGAVQISVGNERLWQKFCEAFGLDANADGMATNTERVTNRPAVTAAVEEKFGQYP AKELLEKLSEAGIPAGKVRTLPEVYEWEQALSQHLKISVDHPVLGDIDLPGPAIRFFDVD GDTETETTRLEHQAPPLLNADSEKIRAWIEEA >gi|294970624|gb|ADNU01000071.1| GENE 13 11558 - 11965 385 135 aa, chain - ## HITS:1 COG:no KEGG:Xcel_1732 NR:ns ## KEGG: Xcel_1732 # Name: not_defined # Def: hypothetical protein # Organism: X.cellulosilytica # Pathway: not_defined # 41 127 57 143 153 76 44.0 3e-13 MRVLCFTLAPIVVLAYLALSIALTVIEWKSWRGYDIVWMNLLGLLFGFVVWRVGSIEARP SPDGLTVRNIFSTQFYEWNQIIDAHLPLNSSWAVLDLNDGTTTSVMAIQHSDAGRARSEI NRLRTLIETNTKGEQ >gi|294970624|gb|ADNU01000071.1| GENE 14 11985 - 12839 629 284 aa, chain - ## HITS:1 COG:MT2181 KEGG:ns NR:ns ## COG: MT2181 COG0040 # Protein_GI_number: 15841613 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 283 1 283 284 279 50.0 4e-75 MLRIAVPNKGALSEASAHMLREAGYHLRSNTKTLVHRDGENDVEFFYLRPRDIAVYVGSG ILDLGITGSDLLAESAADAHQIMELGFGASRFHYAALPGTFNSVHDLEGKRIATSFPTLV KRHLKKNAVKAETVKLDGAVEVSIELGVADAIADVVETGSTLRQAGLETFGEPIMHSQGV LIARDGVKDEDLPERARILLRRLKSVSVARTYVMMDYDIRVKDLERATELTPGLESPTVS TLQDPEWCAVRSMVQADNVHAVMDKLYDVGARAILVTNIGACRI >gi|294970624|gb|ADNU01000071.1| GENE 15 12851 - 13114 306 87 aa, chain - ## HITS:1 COG:Cgl1469 KEGG:ns NR:ns ## COG: Cgl1469 COG0140 # Protein_GI_number: 19552719 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Corynebacterium glutamicum # 1 87 1 87 87 91 55.0 4e-19 MKTFDELYTELQHKVETGDPNSSTVKEHAAGVHAIGKKIVEEAAEVWMAAEHETVEEFTA EASQLIYHLQVMMLAKGVRPEDVYKQL >gi|294970624|gb|ADNU01000071.1| GENE 16 13124 - 13789 616 221 aa, chain - ## HITS:1 COG:Cgl0064 KEGG:ns NR:ns ## COG: Cgl0064 COG3201 # Protein_GI_number: 19551314 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Corynebacterium glutamicum # 16 199 16 212 230 114 35.0 1e-25 MELFSWLNTPVFELLGEPVPWSDFLGNIFALLTVYLALKCNILSWPVQILGSVLLFSASV SAHLGGNASRQVVIIIAAVWGWMTWKKSHEQDGEVRVRWATARERVLIVAALLVGTLGFG YILHLGNWSWNPFPDAYIFVGSLVAMYAQGKAVVEFWFVWLAVDLVGIPLAIMGGLLFSG IVYFIFLIMVIMGIVDWAKRSRQTVTHPSSRATTFTSDDVY >gi|294970624|gb|ADNU01000071.1| GENE 17 13789 - 14442 618 217 aa, chain - ## HITS:1 COG:Rv1408 KEGG:ns NR:ns ## COG: Rv1408 COG0036 # Protein_GI_number: 15608546 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Mycobacterium tuberculosis H37Rv # 3 215 13 225 232 211 53.0 9e-55 MKIHPSILSADFANLETELQRISNADMAHVDVMDNHFVPNLTFGPPVVERIKAVSPVPID AHLMIADADRNAPVYAEMGCESVTFHLEAAAAPVRLARELRRLGAQASVAIKPGTPVEPL IDLLGEFDQVLIMTVEPGFGGQKFLDVCLPKVKRLRAAISEQNMKVNIQVDGGISASTLD RAVEAGANVFVAGSAVYGSDNPAATIDELRAQALAHV >gi|294970624|gb|ADNU01000071.1| GENE 18 14446 - 15930 1134 494 aa, chain - ## HITS:1 COG:Cgl1561 KEGG:ns NR:ns ## COG: Cgl1561 COG0144 # Protein_GI_number: 19552811 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Corynebacterium glutamicum # 41 493 76 510 511 286 41.0 8e-77 MTDASDRRNNSRGSRGGRGPGGRGRGGKNRLGHRERPKANPRVIAWEVLRDVDLNDAYAN LLLPAKLERTRMSGPDAAMCTEMTYGTLRARRFYDAVIEKVSDRPVDQIEAAVLNAMRLG AHQVLAMRVADHAAVSETVGVISKNADTKIANRAAGFVNAVLRRITEKSREEWLEELCEG LSDDERLEITTSHPAWIIRSLRQALVANGRNAEELTQLLEAHNTPARVCLSVLDGTRDQV AQKHGEPTELSPIGVTLTHGDPAHVDAVAAGRARVQDEGSQLVALALVEAEASEDPADPW LDLCAGPGGKTSVLAAHAGTKRVDAVDASAHRTELVKDSTRAFDNVQAVNEDGRDFAQAN PQTYTRVLVDVPCSGLGALRRRPEARWRRQPSDIGALGGVQRDLLRTAIEATKSGGVIAY TTCSPHVAETLMVVEDIVKKQPVTVMDAPEVLAQLTGKPAETFESATVASGRVVQLWPHI HATDGMFLALLKKD >gi|294970624|gb|ADNU01000071.1| GENE 19 15932 - 16147 216 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396525|ref|ZP_06806685.1| ## NR: gi|295396525|ref|ZP_06806685.1| methionyl-tRNA formyltransferase [Brevibacterium mcbrellneri ATCC 49030] methionyl-tRNA formyltransferase [Brevibacterium mcbrellneri ATCC 49030] # 1 71 1 71 71 133 100.0 5e-30 MDGKRTKLAGLSETDIHVPAGEIREHDGQILIGTGTTAVQVERIQPFGKPMMDAHDFVRG NANAVFDVEGQ Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:11:24 2011 Seq name: gi|294970619|gb|ADNU01000072.1| Brevibacterium mcbrellneri ATCC 49030 contig00107, whole genome shotgun sequence Length of sequence - 2657 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 440 - 706 286 ## Asphe3_22430 hypothetical protein 2 2 Tu 1 . - CDS 1010 - 1195 128 ## 3 3 Op 1 . + CDS 1239 - 1559 311 ## Ksed_06730 hypothetical protein 4 3 Op 2 . + CDS 1596 - 2655 865 ## Ksed_06740 hypothetical protein Predicted protein(s) >gi|294970619|gb|ADNU01000072.1| GENE 1 440 - 706 286 88 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_22430 NR:ns ## KEGG: Asphe3_22430 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 88 1 88 88 80 67.0 2e-14 MNVTPDFGGLDGLTDLETVIGALLMFVLVTAVLMLIVSALVWAIAAAIGHAAAASKAKAG VLVALGAAALGGCGIAWMNWLISIGQQL >gi|294970619|gb|ADNU01000072.1| GENE 2 1010 - 1195 128 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGNGVAHQVPTTPLADEAPHDVVPRADAPRALALRYDGRRGEKTTSRREAVPSTAPAVR L >gi|294970619|gb|ADNU01000072.1| GENE 3 1239 - 1559 311 106 aa, chain + ## HITS:1 COG:no KEGG:Ksed_06730 NR:ns ## KEGG: Ksed_06730 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 106 1 103 103 145 80.0 7e-34 MLDFLTFALAVPELLAANIDISPNDDGLPGIAQLRTFVGAVMTIGLILSVLALIISAIVW GFGSNSSNPQLASRGKLGVLTSCGAAVICGASVTLIQFFWDVGQSV >gi|294970619|gb|ADNU01000072.1| GENE 4 1596 - 2655 865 353 aa, chain + ## HITS:1 COG:no KEGG:Ksed_06740 NR:ns ## KEGG: Ksed_06740 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 1 321 1 321 495 444 77.0 1e-123 MGVCDIPVISNVCDSAGEAAASLITAPFDWLATVLGETAAWMFEAVWTVFDTTTLVDVTS PEYVSVYNLLLGIGVMLMLVFFCLQLIQGLIRRDPAALSRAALGLAKSVIGSFVVITLTA LALEIIDQLCVGIIQAAGETTATMGDKIAVLVAGLTALNLTAPGVAAILGIFLGAMAIAA AAIVWLSLLVRKALLLVAIALAPLAFSGASWDHARGWIGKWAMFVIALICSKLVLVVILL VAVTQVSAPIDGDISSISDPLAGIVLMALAGFAPYICYRFLSFIGSDFYTMAGSEQDAKQ ALNRPMPIPGKQEGNEPKKVLDDKKSDSPSGSGEGGKPSGGKPTPPPPSSGGT Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:11:42 2011 Seq name: gi|294970612|gb|ADNU01000073.1| Brevibacterium mcbrellneri ATCC 49030 contig00108, whole genome shotgun sequence Length of sequence - 4404 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 52 - 831 798 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 902 - 938 -0.8 2 2 Op 1 . - CDS 850 - 1461 263 ## PROTEIN SUPPORTED gi|227426798|ref|ZP_03909862.1| acetyltransferase, ribosomal protein N-acetylase 3 2 Op 2 . - CDS 1467 - 2264 563 ## MSMEG_6194 beta-lactamase related protein - Prom 2344 - 2403 2.1 4 3 Tu 1 . + CDS 2379 - 3455 917 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog + Term 3459 - 3496 -0.5 - Term 3447 - 3483 3.1 5 4 Tu 1 . - CDS 3501 - 4043 610 ## Mmcs_0794 serine/threonine protein kinase Predicted protein(s) >gi|294970612|gb|ADNU01000073.1| GENE 1 52 - 831 798 259 aa, chain + ## HITS:1 COG:Cgl0654 KEGG:ns NR:ns ## COG: Cgl0654 COG0614 # Protein_GI_number: 19551904 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 30 254 105 325 325 114 34.0 2e-25 MALLLTGADNMAAVSASSKNPQMGMVPLEARKVENTLPPGVNPDAEQILAFKPDLVLTTA RHGGEKSAAEQLQKANVPVLQLHTEDFSTPEKYAETLKRVGEALHEEDKATSESDALMKK IKEIDDKRMDADHEPSVLALMARGDKIMVMDSDQMLPGLAIRAGAKDATETLGIENTAPI DAEKLVKAQPDIVLLEDFMGKGQAPFDSFLNNPAVAQIPAVKNKQIHVVPMTEASGVAGV NLPTGYQKVLSIVAESKAS >gi|294970612|gb|ADNU01000073.1| GENE 2 850 - 1461 263 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227426798|ref|ZP_03909862.1| acetyltransferase, ribosomal protein N-acetylase [Xylanimonas cellulosilytica DSM 15894] # 1 202 1 198 204 105 33 5e-23 MQPVEIETERLVLRPLQPGDAQAICDICQDPLIQKWTMVPSPYLLSDAESFISLTTQWWE SDQPTWIMLLKDAHTEGDPDTDAETTSAQVAGMISYNNPLIAGDRGEVGYWANPEHRGKD YTSEALNAIIDWGFELGLGAIGWRCEVHDGVPNYASARVAQKCGFVYDGTIRLEHTNKGK LYDSRIATLTPKDPRTDTGPWPD >gi|294970612|gb|ADNU01000073.1| GENE 3 1467 - 2264 563 265 aa, chain - ## HITS:1 COG:no KEGG:MSMEG_6194 NR:ns ## KEGG: MSMEG_6194 # Name: not_defined # Def: beta-lactamase related protein # Organism: M.smegmatis # Pathway: Penicillin and cephalosporin biosynthesis [PATH:msm00311]; Biosynthesis of secondary metabolites [PATH:msm01110]; Two-component system [PATH:msm02020] # 2 257 14 269 272 190 43.0 6e-47 MDTVRWSIDIRDIDGPVLHEEGADLLCETASIGKIFLLVEVARRILNCELDPTSPIDIPQ DHLVEESGILYRFVNQNIAVADAALLVGAFSDNLATNALIHMCGLDTVRSVSSALGYEHT ALLDFIRDEERTPDLPWASSAGTARELSHVMEQLHRGTVVSPEVSAQVLSWLASDADTSM FADAFYLDPLAHIHEDGVLLRHKTGTTEVVRADVGIVTGPKATVSYAVLANWKGMDDQRE PVMQRMRALGAKVRAYVTGGTTHVG >gi|294970612|gb|ADNU01000073.1| GENE 4 2379 - 3455 917 358 aa, chain + ## HITS:1 COG:SPAC3A11.10c KEGG:ns NR:ns ## COG: SPAC3A11.10c COG2355 # Protein_GI_number: 19115105 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Schizosaccharomyces pombe # 2 326 61 387 409 232 40.0 9e-61 MYPVIDGHNDLAWKSRVERQYRTEGLDGEVPVLHTDIPRLRAGGVAGQFWSVWIDPVLEG AQQVTATLEQIDFVHRLIASYPEHFQLALTADDVRASMKAGVIASLIGVEGGAQIDGSLA VLRQYARLGARYMTLTWSKTTEWADSATDEARHGGLTDFGREVVKEMERIGMIPDLAHVA PSVMCQTLDLVDTPVLVTHSGARALCEHPRNVPDDVLARIGDAGGTVMVPFVPKFISQER YEWEEGDQSTPAPAVTLKQVADHVDHVRELAGVDSVGIGADFDGIDATISGLDHVGTYQD LFAELESRGWTRQELEGLGYKNVLRVLEAHDPAYRAFVRGETVPTEPHQFAPRVDTES >gi|294970612|gb|ADNU01000073.1| GENE 5 3501 - 4043 610 180 aa, chain - ## HITS:1 COG:no KEGG:Mmcs_0794 NR:ns ## KEGG: Mmcs_0794 # Name: not_defined # Def: serine/threonine protein kinase # Organism: Mycobacterium_MCS # Pathway: not_defined # 46 177 494 620 623 93 37.0 3e-18 MRDDNATVSSPEPVAEDQQGTEPDQSGVGNDEDAPAVSHGSEGSDDTDDSSLRSAEKLDQ KVEEDKVVVDQNLIGKWVPQISSKKVGMEADGQVWDEDTIYEEHQELANEYGASQVLLLK SEDYASYRQPGYYVTVIDSSYDDPDDALQWCRFYSLDADHCYAKQINTTGGPDGTTRLQE Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:12:09 2011 Seq name: gi|294970553|gb|ADNU01000074.1| Brevibacterium mcbrellneri ATCC 49030 contig00109, whole genome shotgun sequence Length of sequence - 60224 bp Number of predicted genes - 54, with homology - 52 Number of transcription units - 29, operones - 14 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 154 - 756 604 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 2 2 Tu 1 . + CDS 955 - 1812 526 ## COG3868 Uncharacterized conserved protein + Term 1844 - 1879 -0.9 - Term 1937 - 1989 15.1 3 3 Tu 1 . - CDS 2020 - 2526 552 ## gi|295396542|ref|ZP_06806699.1| possible YvgO - Term 2943 - 3002 18.8 4 4 Op 1 . - CDS 3077 - 5491 1935 ## DIP0278 putative surface-anchored membrane protein - Prom 5630 - 5689 1.6 5 4 Op 2 . - CDS 5830 - 6039 193 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 6 4 Op 3 . - CDS 6041 - 6571 469 ## SCO7514 integral membrane protein 7 5 Op 1 2/0.222 + CDS 6756 - 7253 74 ## COG3464 Transposase and inactivated derivatives 8 5 Op 2 . + CDS 7187 - 9721 1938 ## COG3464 Transposase and inactivated derivatives - Term 9727 - 9759 -1.0 9 6 Tu 1 . - CDS 9896 - 11539 1731 ## COG0477 Permeases of the major facilitator superfamily - Prom 11582 - 11641 2.6 + Prom 11582 - 11641 1.6 10 7 Op 1 . + CDS 11752 - 12372 675 ## Bfae_08850 transcriptional regulator 11 7 Op 2 1/0.333 + CDS 12463 - 13512 674 ## COG0666 FOG: Ankyrin repeat 12 8 Tu 1 . + CDS 13710 - 15287 1732 ## COG0477 Permeases of the major facilitator superfamily 13 9 Tu 1 . - CDS 15367 - 16311 803 ## COG1607 Acyl-CoA hydrolase - Term 16370 - 16408 -0.9 14 10 Op 1 . - CDS 16427 - 17047 397 ## RSal33209_2679 universal stress protein 15 10 Op 2 . - CDS 17068 - 18540 1409 ## COG0477 Permeases of the major facilitator superfamily - Prom 18723 - 18782 1.6 16 11 Tu 1 . + CDS 18443 - 18661 58 ## + Prom 18675 - 18734 4.2 17 12 Tu 1 . + CDS 18766 - 19314 616 ## COG2353 Uncharacterized conserved protein + Term 19467 - 19508 -0.6 18 13 Op 1 . - CDS 19419 - 19832 403 ## gi|295396559|ref|ZP_06806716.1| hypothetical protein HMPREF0183_2214 19 13 Op 2 . - CDS 19840 - 20880 1001 ## COG2008 Threonine aldolase 20 13 Op 3 . - CDS 20948 - 22312 1305 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 22390 - 22449 2.5 + Prom 22376 - 22435 5.8 21 14 Tu 1 . + CDS 22476 - 22649 220 ## Noca_1935 ABC-3 protein + Term 22674 - 22718 15.3 - Term 22662 - 22706 14.5 22 15 Tu 1 . - CDS 22739 - 23500 246 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 23 16 Tu 1 . + CDS 23815 - 27603 3319 ## COG1012 NAD-dependent aldehyde dehydrogenases - Term 27447 - 27490 1.3 24 17 Tu 1 . - CDS 27621 - 28556 956 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Prom 28674 - 28733 1.6 25 18 Op 1 7/0.000 + CDS 28826 - 29830 870 ## COG0672 High-affinity Fe2+/Pb2+ permease 26 18 Op 2 9/0.000 + CDS 29876 - 31126 1500 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 27 18 Op 3 . + CDS 31126 - 32433 1076 ## COG2837 Predicted iron-dependent peroxidase + Term 32469 - 32493 -0.3 28 19 Tu 1 . - CDS 32454 - 33278 790 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 29 20 Op 1 6/0.000 - CDS 33417 - 33680 295 ## COG4115 Uncharacterized protein conserved in bacteria 30 20 Op 2 . - CDS 33683 - 33937 237 ## COG2161 Antitoxin of toxin-antitoxin stability system 31 21 Op 1 . - CDS 34158 - 34787 502 ## COG1309 Transcriptional regulator 32 21 Op 2 . - CDS 34881 - 35102 60 ## + Prom 34842 - 34901 3.3 33 22 Op 1 3/0.000 + CDS 35029 - 35829 265 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 34 22 Op 2 . + CDS 35826 - 37007 992 ## COG3173 Predicted aminoglycoside phosphotransferase + Term 37012 - 37078 24.7 - Term 37191 - 37246 18.1 35 23 Op 1 . - CDS 37293 - 38714 517 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 36 23 Op 2 . - CDS 38780 - 40015 1101 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 37 23 Op 3 . - CDS 40083 - 40793 792 ## ROP_26470 hypothetical protein 38 23 Op 4 . - CDS 40804 - 41577 449 ## AAur_0855 putative integral membrane protein - Prom 41613 - 41672 2.3 39 24 Tu 1 . - CDS 41697 - 43580 1719 ## COG1960 Acyl-CoA dehydrogenases - Term 43989 - 44031 11.6 40 25 Tu 1 . - CDS 44071 - 44949 925 ## gi|295396582|ref|ZP_06806739.1| conserved hypothetical protein - Prom 44981 - 45040 3.5 + Prom 44918 - 44977 1.8 41 26 Op 1 1/0.333 + CDS 45190 - 45723 587 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 42 26 Op 2 . + CDS 45733 - 46419 535 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Term 46426 - 46457 3.4 - Term 46396 - 46462 31.6 43 27 Op 1 . - CDS 46494 - 47108 574 ## COG2364 Predicted membrane protein 44 27 Op 2 . - CDS 47178 - 47855 695 ## Achl_0016 hypothetical protein - Prom 47879 - 47938 3.4 + Prom 47898 - 47957 6.6 45 28 Op 1 . + CDS 48071 - 49249 1104 ## COG3764 Sortase (surface protein transpeptidase) 46 28 Op 2 . + CDS 49249 - 49449 286 ## gi|295396588|ref|ZP_06806745.1| conserved hypothetical protein 47 28 Op 3 . + CDS 49446 - 50096 496 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 48 29 Op 1 7/0.000 - CDS 50118 - 51989 1372 ## COG0515 Serine/threonine protein kinase 49 29 Op 2 4/0.000 - CDS 52068 - 53612 1542 ## COG0515 Serine/threonine protein kinase 50 29 Op 3 19/0.000 - CDS 53678 - 55147 1248 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 51 29 Op 4 4/0.000 - CDS 55144 - 56727 1470 ## COG0772 Bacterial cell division membrane protein 52 29 Op 5 7/0.000 - CDS 56724 - 58397 1342 ## COG0631 Serine/threonine protein phosphatase 53 29 Op 6 . - CDS 58394 - 58921 427 ## COG1716 FOG: FHA domain 54 29 Op 7 . - CDS 58918 - 59883 759 ## SCAB_45471 hypothetical protein + TRNA 60139 - 60222 69.4 # Leu CAG 0 0 Predicted protein(s) >gi|294970553|gb|ADNU01000074.1| GENE 1 154 - 756 604 200 aa, chain + ## HITS:1 COG:XF2028 KEGG:ns NR:ns ## COG: XF2028 COG1961 # Protein_GI_number: 15838622 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Xylella fastidiosa 9a5c # 3 191 2 183 185 134 44.0 1e-31 MRLLGYTRVSTAGQDAQLQLDALLDAGVQKRDVFSDVTSGSKVAKQRPGMKRLLDYAEDG DTVVVWRIDRLGRSLLDVLATVNHLRDRGVKVRSVSDNIDPETSSGRMMLGMLATLAEYE RELITERVNAGIAAAKQNGTKFGRPPVDPDEIAQKLEIAEDARAKGRTAEDAARLVGWSR ATLYRHRQAAGTDDTLAEPV >gi|294970553|gb|ADNU01000074.1| GENE 2 955 - 1812 526 285 aa, chain + ## HITS:1 COG:DR0164 KEGG:ns NR:ns ## COG: DR0164 COG3868 # Protein_GI_number: 15805201 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 34 285 43 303 305 70 28.0 4e-12 MARRATLPILIFLLMTSGCSENSGVDVHSDSPEISVGATSAHSLPPITGVFDYQLGGAYS LPTPIDVVVRDASAEPLSDAYSVCYVNGFQTQPDDAAMWKEHADLLLHNKHGDLVTDPDW DDEYILDPSTPDQRADILKIISPIITGCANAGYDAVEIDNLDSFDRFAQIEQNAAMTLAS AYVEIAHDAGLAIAQKNAAEIARSAHEDLGFDFAVTEECGSYDECDAYTSVYGPHVLEIE YPDSLEEAGMTFADVCALPDRAPLTILRDRALVARGAKGYRLESC >gi|294970553|gb|ADNU01000074.1| GENE 3 2020 - 2526 552 168 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396542|ref|ZP_06806699.1| ## NR: gi|295396542|ref|ZP_06806699.1| possible YvgO [Brevibacterium mcbrellneri ATCC 49030] possible YvgO [Brevibacterium mcbrellneri ATCC 49030] # 1 168 1 168 168 238 100.0 1e-61 MTKKNHIHRALATTAIAGVAFAGIGIAAANPAAAADEKPASSSSSYSGSGNVNVNFDPVA IVDSIVAAVNDQDDRSGAVKAATEVGYYSKDNPDRMSVAVVNKNQDIQVSGEIADAKNID IKGGNYVIYWFSGPGQVVNNGDGGWLNWGTYGNIERADDNLIKINGGL >gi|294970553|gb|ADNU01000074.1| GENE 4 3077 - 5491 1935 804 aa, chain - ## HITS:1 COG:no KEGG:DIP0278 NR:ns ## KEGG: DIP0278 # Name: not_defined # Def: putative surface-anchored membrane protein # Organism: C.diphtheriae # Pathway: not_defined # 40 663 75 707 1080 102 25.0 8e-20 MFMVTGMGVTAAQAADSFATEATVSNLHFVKESVEENKKAELSGEWSLPDNPGTPAGFTL ALPEELQGNVDSFNLTSSDGSGEIVGQCKATATELTCTISDDYIKKNPIGLKGTFNFWVT VKVDVEEIEHKEFTFDNVEGKMPGIDVTPRKCTVGCDFTGQDSRKFGYYHNDGEFVSWWI DIEAPKEGMAGGEQIVVDDIIGPNQRIDADKIKVQKATEIYDAGDGKQTPHYTKDLPKSD FTVENDGAKVSWTAEKGAYYRINIPADTTDSGASGEYTNQAKVTVGTTTRTTEVVTVKRT GGGGTGIGTNVGRFDITKKIAGDAKIAADQAFTVNYTVTQPNGEKKTGTLTVKGGETVKS PEFPKDSTVHLDEVKPADSASVKWEKPKFSKNDFTLVGGTATAVDLTNTANLQKGKFSAK KAIEGTGKHRVDDSTTFTLNYSYPAGDGFEAGSGKLELPASGETVESDALPVGAELTLSE EAPAEIPGATWGEPQISPNTLTISADGTDATAVTVTNPITDNVGAFSVTKSLSGDGVDTV PEGTVFTVKYSYPADDSLGIKAGEGTVEVKAGDTAKVDNLPAGAKVTLTEVTAEDPDGAE WGEPVFDHSEFTVLKDNTVAINLDNPVHLRTAAFSLKKQLDGSGKELVDDNAVFTVEYSY PAGPGYDAGQGTLDLRADGSAVESPQLPVNAKIHLEEKTPEAVEGGSWTGHKFSDNDFAL TDSADVSVVLTNTIDKPKEETPSTPPSTPSSPAPSTPGSTQPPKDSGDNLPRTGGAAWGV LGAGLALLVGGSALVLAMKRKRLN >gi|294970553|gb|ADNU01000074.1| GENE 5 5830 - 6039 193 69 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 1 65 1 65 67 79 52 6e-14 MAIDVKIDVLLAERGMSVGDFAAAIGITPANVAVLKNGRAKAVRFETLDAICRVLDCEPG DVLKHSPDS >gi|294970553|gb|ADNU01000074.1| GENE 6 6041 - 6571 469 176 aa, chain - ## HITS:1 COG:no KEGG:SCO7514 NR:ns ## KEGG: SCO7514 # Name: SCBAC25F8.06 # Def: integral membrane protein # Organism: S.coelicolor # Pathway: not_defined # 10 176 5 166 166 63 34.0 3e-09 MNSLFVRHTLIVTLISFLALGFLVCLFAQIVIVPGSLAAEAQFDPVIARAYTGLTFIGII GIACFEAVLVATAMLSLQCWGDKVFSRASIIWMNVLIGACLAAAVVCFFATFVDLVSPEL PTGAFPDDADDSTSNALLIFGAAGAAACVTASLVLVVLRDLIKRATGIHSELKQVI >gi|294970553|gb|ADNU01000074.1| GENE 7 6756 - 7253 74 165 aa, chain + ## HITS:1 COG:Cgl2316 KEGG:ns NR:ns ## COG: Cgl2316 COG3464 # Protein_GI_number: 19553566 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 2 137 120 258 436 112 41.0 3e-25 MVTHLTVARVAEGLGVAWDTANDAVLAEGRRVLIDDAARFDGVKDVGVDGQVWRHTRRGD KFVTVIIDLTPVRDGTGLARLIDIVEGRSKQAFKTWLAARPQAWRGRVEVVAMDGFTGFK TATAEELPDAVTVMDPLCGPAGRRCSRPVPTPSATRDPRPPRAQG >gi|294970553|gb|ADNU01000074.1| GENE 8 7187 - 9721 1938 844 aa, chain + ## HITS:1 COG:Cgl0876 KEGG:ns NR:ns ## COG: Cgl0876 COG3464 # Protein_GI_number: 19552126 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 67 169 1 103 127 109 57.0 3e-23 MLSTGADAECNSRSSAAAGSRVIGSTPTAGPSTPVPGLLTDNQSARLTALFTTDDHVEAT WGIYQRMIAAYRHEEQRRGRELTVKLIEFVSHGVPAVLVEVMSMGRTLAKRADDIVAFFD RPGTSNGPTEVLNGRLEHLRGSALGFCNLTKLHRQEPPGGRRLRTTTTPWNGMSHEKLGD VKTAYDKAAGVTGPSAPSFTIAPHAGSEKDGDKNLTDLTFNAGNDAAEGTVVFYIDGYHL AEVPVKGGKATWSEMIGSNTSAFQAVFVPTKGAARWVSAPLTSSTGQKAVTTQAAGQFPM ETPDAPAGDFSTGEVQVSSRDVSVNAHTQGDGNLATIDTKPADDSLIYNVTGGFYEEGYD EPTCSVDVVSGPGRRSLQVDREYCKGDQYTLRLTLEPQPRARIGNTETIDLGQVAGAGKV VQTQFSDGGTTTTPDPGEGNETPNPGEGNETPNPDDGNDSSDGGLLNTPVTINKGHVDLR AMDVNGEFSVALGDDSRQHAPESVTRTIDSTTLEVTKLAKVKREGDVLADPSYDVLGSKG TEFYILPQAQQSGRVWPGFSSETLDREKYPEGATMTLTPVSVPEGGKWFAYTENLGAIQT MYASSDKASDIPLPPGTHMHTAWAFTKPGTYTIDVTARAKQATGGARSAGGDVTAKTQRL TFVVDHKSGGDDGGGSTPPTEAPGEEPTQAPTQAPGEEPTQAPSEAPGEEPGEEPGEQPS QEPGEESTQAPGEEPGKDPSQEPHDPAKPGESDTDDSGTPDDNQTEAPADVNESGSDNGA GNTSGGSSDNTSNGSNGTGSNGSGSNNGSFLPRTGASVLPIGLTAGLLVVTGAALLAATR RRNN >gi|294970553|gb|ADNU01000074.1| GENE 9 9896 - 11539 1731 547 aa, chain - ## HITS:1 COG:Cgl0377 KEGG:ns NR:ns ## COG: Cgl0377 COG0477 # Protein_GI_number: 19551627 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 56 546 46 541 544 322 37.0 1e-87 MIEPSHASGTGESTQSATRRTRLELPDENTAPEATDPNSTETPREFTGLDRQGKLVIAGL MLGMFVAAISQTIVGPALPRIVAELGGMEHYSWIATAAMLMSAVTVPVVGKLSDMYGRKP FYIGGLVVFMLGAALAGMATNFWFLVFARALQGAGMGTLMPLSQTIIGDIIPPRQRGKYQ GLMGATFGIASVAGPLLGGWVTDTLGWRYLFYLALPIGVVALVFLAKFMHVPQQRSHGKL DYLGIITLTPGLVIGLLAISWGGNTYEWTSPVILGMGAISVVLLAAFVWVETRVENPLIP LRMLRNSTVSLSILASFFIAVAMFGAIIYIPVYAQGVLSVSATQSGAILIPLNVAMIVTS ILMGVVITKTGNYKVILILGAMMLLGGYVLLSMLSWQSNLWDLTLAMTAVGMGLGMSMQT YTLVVQNAVDRTELGVATAAVQFFRNVGSTIGIAVLGSIMSSAMMPKIQEHLPAGAKDMG SAMGADSGVGSALDPAKLESLPGPIVDAIHQGMGEAMHLVFVSGVPFVVAALVLALFVKQ LTLRTTH >gi|294970553|gb|ADNU01000074.1| GENE 10 11752 - 12372 675 206 aa, chain + ## HITS:1 COG:no KEGG:Bfae_08850 NR:ns ## KEGG: Bfae_08850 # Name: not_defined # Def: transcriptional regulator # Organism: B.faecium # Pathway: not_defined # 6 200 18 207 211 120 40.0 3e-26 MDTHKQPQGVREKRKRESRDAMHRAALELVSAHGLNNVTVEQIAERAGVSARTLFNYWGS KEAVVLGAEPASDVALVKVLQGRPADEDVAESLAVVQQAYLESVTPDRSIRTLKRKVMRR EPQLAQMSVNYHNDVQRSLIETLAGRLEANFDQDVACDLATVAIYDMFASVRAAFALSMS HDIDLFEALTRINAYRADGLLAFSRA >gi|294970553|gb|ADNU01000074.1| GENE 11 12463 - 13512 674 349 aa, chain + ## HITS:1 COG:Cgl0131 KEGG:ns NR:ns ## COG: Cgl0131 COG0666 # Protein_GI_number: 19551381 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Corynebacterium glutamicum # 1 340 1 347 355 118 28.0 2e-26 MAYKRKTLPANFTEILEGGDLDAMKAVYDTCLLEATTGYYKRTALALVKSPPELVRWLVE QGLDIDIQDHFGYTPLAAAASDWDTPRMQSRMQLLLELGANPNPESRHLPLMIAAHSCRV EAVRLLLEYGANIHALEWPHEYTAADKAVAQSYEGYNLPSILETLSFLLDAGAHLTDEGR RFVAQFGKEHAQTARLRKENTDGTRAVDAAMAELYRLSGVPPVQLIEPHDGTSRIEVPDL PVRKQFSWLWDYLVPMGGPAETVQGEVVRIAGRIGGELFNNGGGNWDDDYRAMCDTWLDI VGTHPTAIATLRRGLLDENAIKAIEAASVQYVIDHPEPVPNSSDLPYQR >gi|294970553|gb|ADNU01000074.1| GENE 12 13710 - 15287 1732 525 aa, chain + ## HITS:1 COG:Cgl2629 KEGG:ns NR:ns ## COG: Cgl2629 COG0477 # Protein_GI_number: 19553879 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 43 514 31 479 481 312 43.0 1e-84 MLSRRQNNSSGPDRSHSNNHSNQGSDAIDPAGMRAIWLLLVAAFVSILNETTMAIAIPTL NEALGIPPEQGQWLTSGFMLTMAVVIPTTGFLIQRFTTRQVFLAAASLFALGTAVCMLSH GFLPLLIGRIIQASGTGIMMPLLMTTMMEVVPSHQRGRMMGRVGMVISLAPALGPTMSGI VLDTLGWRWLFGIVLPIALVSLILGWRWLANLGETTTAPIDVLSVGLSAFAFGGIVFALN QFAKGGSAAEVSSPESASGGSGVAALGGFFSSPVGTWTILGASLVILVLFVLRQLSLQKR NGALLDLRVFLSGNFVVSVAIMAIIALSMFGTFSLLPLYLQSVVGLKATQSGLVMLPGSI LMGLLGPVMGRIYDARGPKILLIPGTIFVAGALLSYSTVGAQTPVWWIVTTQIVMALGLA GSFTPLFSASLGSLQRYLYSHGSAVLNTLQQVAGAAGTAMLIGVYSATLHSGTTAGLTAV QAGEPGAHSAFRIAMIAALVAVVLSVFVRKPEEDEPQTRTVVADD >gi|294970553|gb|ADNU01000074.1| GENE 13 15367 - 16311 803 314 aa, chain - ## HITS:1 COG:Cgl2532 KEGG:ns NR:ns ## COG: Cgl2532 COG1607 # Protein_GI_number: 19553782 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Corynebacterium glutamicum # 5 312 19 328 339 239 40.0 5e-63 MHDRITLRFLAAPTDETKDGSSIQAGRVLEWIDKAGFACAAGYSERYCVTAYVGNVHFSQ PIRPGALVEASARIIYTGRTSMHVLVTVESANPRTGEFALATHCLLVFVAMDDDRKPVEI PQWRPRTREDEELSQDALERIEARKAIHHVTLAQTFSDEGTTPKLTLRFLANPTDVNWGG NAHGGIVMRWLTECAQTLSTSFVGQPTVCVYTGGVHFHGPVHIGDVVEVDGRIIHTGPHS VHISLRVRSANPRDMKFRLTTRCTMIFVHVNELGKASEVPQLELTSEEDRLLDAHAVDLV ARRQRLPHLPLPKR >gi|294970553|gb|ADNU01000074.1| GENE 14 16427 - 17047 397 206 aa, chain - ## HITS:1 COG:no KEGG:RSal33209_2679 NR:ns ## KEGG: RSal33209_2679 # Name: not_defined # Def: universal stress protein # Organism: R.salmoninarum # Pathway: not_defined # 34 170 4 138 141 68 38.0 2e-10 MTTDPRSHDVQPEVEDTSEPPATGVPDESREYVVVVGVSDTSNSPKALAWAMDMVRARGG RLIAVRASTAGGGFNAYASPPTTGRRPLEPEVAKLKADVISVLGAEAVEGPESVVDVHVF RGETSRVLRNVSKNASLLVLDAPRNPVTQPLLAPRVVYNVDCPVVMMPPTISGDRPSRWL RAFDSMGRAIARGTGTAGRPGLGGHL >gi|294970553|gb|ADNU01000074.1| GENE 15 17068 - 18540 1409 490 aa, chain - ## HITS:1 COG:AGpA571 KEGG:ns NR:ns ## COG: AGpA571 COG0477 # Protein_GI_number: 16119622 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 473 18 461 461 145 27.0 1e-34 MSTAQSATEKPIKTSIPIRMHDMPWSRFHWMVIVGLGTAWILDGVEVQIVAAGGFESSLN MTTLQVTFAATIYLLGQVTGALLFGRLTDTVGRKKMFVLTLFLYLGASLICAASPAPWFF YIFRFLAGMGIGGEYSAVNSAIDELIPGKHRGRVDLAINGTYWLGAGIGAAVSSVFLNEG YFDQNIGWRLAFLVGPILGLGIIYLRRHIPESPRWLAKHGREEEGEKIVQAIEQEVKESG RELPKRTKDDYIWLRRTEGLNFKQLIWVFFKLYPTRTVLGATLMITQSFLYNAIFFTYSL VLQNFYDLKASEAALYFFPFALGNLLGPILLGPLFDTVGRRKMIAGCYSISGVVLAVSSL MFVNDMLNPLTHTLFWCVSFFFASAGASAGYLTVSEIFPQEVRGQAISYFFSIAQIAGSL GPVLFGVLIGEGTSREPMMWGYLLATGIMLIGAAVAAVWGVDAEGKSLEEIAPPLIEFDE DGNEISHLPK >gi|294970553|gb|ADNU01000074.1| GENE 16 18443 - 18661 58 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTIQWNRDHGMSCMRMGMLVLIGFSVADCAVDMRSPSANCGDGGVFGYLRRVISLRPRAR RAFSRYSTYLSQ >gi|294970553|gb|ADNU01000074.1| GENE 17 18766 - 19314 616 182 aa, chain + ## HITS:1 COG:Ta0132 KEGG:ns NR:ns ## COG: Ta0132 COG2353 # Protein_GI_number: 16081295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermoplasma acidophilum # 12 181 6 176 180 126 40.0 2e-29 MTSLPQGLSAGTWNIDGAHSTIGFTVRHGGVSKTRGKFDVIAGSATLGDTFESLSVTATA DPKSINTGNETRDEHLKSGDFFQTEEHPEIVFKSTSVEDFDGSEFTLKGELTLLGVTKEV VFDAEFLGANEDPNGNQITGVSATAKINRKDFGMSFSATMPGGDLLVADKVNLEIDVELV KA >gi|294970553|gb|ADNU01000074.1| GENE 18 19419 - 19832 403 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396559|ref|ZP_06806716.1| ## NR: gi|295396559|ref|ZP_06806716.1| hypothetical protein HMPREF0183_2214 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2214 [Brevibacterium mcbrellneri ATCC 49030] # 1 137 1 137 137 262 100.0 5e-69 MSAQNQPIHQSTPMFHSFESWEEQPLENKWVYTFDTRNFYQLKSASQIMDLIQGLRHDEF LTVENVQDPSHFTQCKRQDSGFMAEAAMPHQLTGFGDSPECLVVSMATCYQIMSHYVTTN GSAPAFESLYTFPIETY >gi|294970553|gb|ADNU01000074.1| GENE 19 19840 - 20880 1001 346 aa, chain - ## HITS:1 COG:alr3296 KEGG:ns NR:ns ## COG: alr3296 COG2008 # Protein_GI_number: 17230788 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Nostoc sp. PCC 7120 # 6 338 2 337 345 227 40.0 2e-59 MKQLHNSELVHFGSDNYAGAHPEVLEALRVASGGHVPGYGEDPYTQRLREWARETFGPNA LIFPVFNGTGANVVSLAALNPRWGHVIAAPSAHINTDETAAPESSAGLKVKPAPAVDGKL TPEAVTSTLSSRDFIHEAQTTSVSVSNSTELGTVYQVEEFRAIAEVAHTSGLSVHLDGAR LACAAAATGAGLEELTRGADVISLGATKNGALGAEAVVVRNPEAVSGIQYLNKSLLQLPS KARFISAQLLALFDGDLWLRNAEHANAQAAKLAKGLMDAGFDVPVKTQANAVIASVEPVV VERVLAQGVIFYAWPFVENGIRLMTAWDTPDSAIDELISTFVAARG >gi|294970553|gb|ADNU01000074.1| GENE 20 20948 - 22312 1305 454 aa, chain - ## HITS:1 COG:Cgl0225 KEGG:ns NR:ns ## COG: Cgl0225 COG2239 # Protein_GI_number: 19551475 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Corynebacterium glutamicum # 36 453 19 436 436 431 56.0 1e-120 MTVDVHTAIEQLEDELASSHLDSAHLDVINSLAKQIPTHELTRLVSNRPIVQSAVLFRVL KKDEALAVFENLPPSYQADLIQALRGPDVAEIIEGLDPDDRAELFGELPAIVVKSMMKGL SHDERTKTSIVLGYPREAIGRYMSPEVLSLHDDWDARRALEVVRERIHEPETVYLLPVLA RGRTLAGVVSLRTLVGASPDTPVTELMREPSSVEAMTDREDAARSFLDQRLIAMPVVDAE NRLLGILTMDDVLDIIDEEDAEDAARGSGSEPLDRSYMSSTIMQIVKSRIVWLLVLAVSA VLTVQVLDLYEDRLSQVVALALFIPLLTGTGGNAGNQAATTVTRALAVGEVRVRDLMMVM WREVRVGASLGLVLGSLGFLISGAIYGFQLGSVIGLTLLCICTMAASVGGLMPILAKKVG ADPAVFSNPFISTFCDATGLIIYFTIATVNLGLH >gi|294970553|gb|ADNU01000074.1| GENE 21 22476 - 22649 220 57 aa, chain + ## HITS:1 COG:no KEGG:Noca_1935 NR:ns ## KEGG: Noca_1935 # Name: not_defined # Def: ABC-3 protein # Organism: Nocardioides_JS614 # Pathway: not_defined # 21 57 301 337 337 76 83.0 4e-13 MEAVMTAGTEHKHAEHTVEDHKHGENCGHEAVQHGDHVDYVHDGHRHAEHEGHYDEH >gi|294970553|gb|ADNU01000074.1| GENE 22 22739 - 23500 246 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 244 4 234 242 99 35 4e-20 MTTLSDRSIIITGAGSGIGRAIAQEAAAAGAHIIVSDLNQDTANETVELIQRASGHATAV AGDVSSPEVVDQLVAAATSAGPLLGLVNNAGVMDDFAGAAETTDATWELCMRVNVTAPFM LTRAVLPHLLEAGKGSIVNMGSEAGLRGGAAGAAYTSSKHALVGLTKSTAFQYARQNVRV NAIMPGGVETNIIETDYSKLNQAGLAVMGPLHQTATRMAQPSEISALAVFLLSDAASNVS GAIIPCDAGWSAG >gi|294970553|gb|ADNU01000074.1| GENE 23 23815 - 27603 3319 1262 aa, chain + ## HITS:1 COG:Cgl0099_2 KEGG:ns NR:ns ## COG: Cgl0099_2 COG1012 # Protein_GI_number: 19551349 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 454 1262 1 762 763 722 50.0 0 MNHAPNMPRDPHKVPTDHANSEANRELGGATTTDLDELANKAVDRVRRWLRLSTAKPAKP AKSGWLAAKSGQSLNSGSPRRSSPRNASTQALKQEQRLAAVLSDLNGLPFTSGFVDRVIR IEDTKAAARALTEVARLTPESMSLADRAQIQAGAALATTMPDLVIPAARARLRNMVGHMV VDARPEQFGKTVATLKRGGHRLNINLLGEAVLGEEEADNHLEQTHDLLARDDVDYVSIKV SSVASRINMWSYDETVTYVVDRLRPLYRQAMEQAGSEEEAARGAKFINLDMEEYNDLNLT IDVFMRLLSEEEFHQLSAGIVIQAYLPDALPAIQRLSEFARTRVEAGGAEIKVRLVKGAN LAMERVHAELANWPLTVNPSKQATDANYKRILHWTLTPENTSGLRLGVAGHNLFDIAFAH ELSVARGLTDRVEFEMLQGMATKQAEVISADVGDLLLYVPAVHPDQFDAAVSYLVRRLEE NTSPQNFMASIFEIANGSPAFQKEEARFRASVDDLGELLAKGEPPTPNREQDRWKEGAGV GEPGSTAGASETSPANTSPADTTPSSFRNEPDTDISLPVNQAWVRDFMEKSSAPGWLDEQ PQAQPFTSVEDVNRCVETARDQHEWRAMSPTARLEVLDRAADIFAAKRGQFLSVMAHEAG KTLAQSDPEVSEAIDFIRYYARQACELERIQERDGVHFEPDRVIVVTPPWNFPVAIPTGG AVAALAVGASAILKPAGAVARCGALIAECLWEAGVPKSALQLAPSMEGDLGRALIGHEAV DRVILTGASETAELFKSFRPGLQVNAETSGKNAIVITPSADRDLAVADLVYSAFGHAGQK CSASSLGIMVGSVYESERYRKQLVDAAQSLVVDVPTNLRAEMGPLTVDASDKLLRALTQL EEGEEWLVEPRRLDGSGRLWSPGVKTGVKPGSFFHLTECFGPVLGLMRADSLDHAIELQN AVDYGLTAGIHSLDTAEVETWLDRVDAGNLYVNRSITGAIVERQPFGGWKKSTAGLGSKA GGPNYLMMLGAWTDKAATSVEATSAWVDRALESDREAWDTEFGVAHDPNGFEAEANILRY RPCPVILRVGAGASGGAGGTAPAGAAGAGISGAGDTAEVAAGLEAQMRRCALAATRVGAP VEWSVDADVFPQVKGVIEKLRADVEDGSMAPEVDVSDVATFTARLDAVSDPMGVRVRMIG EVPQELVEVAARHINVTLVTDPVTVSGRVEQRYYMREQAVSMTMHRFGNPDRDFQELAKR LR >gi|294970553|gb|ADNU01000074.1| GENE 24 27621 - 28556 956 311 aa, chain - ## HITS:1 COG:AF1206 KEGG:ns NR:ns ## COG: AF1206 COG1250 # Protein_GI_number: 11498805 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Archaeoglobus fulgidus # 3 240 4 254 315 159 36.0 8e-39 MKKVAVVGFGVIGQSWARLFAKNGLEVTVSDVRDDLDKLISHINEDLPDDEQLTTAPLEE AVKDADLVQESGPEREQIKKDLYATMTQAAKDTTIFASSSSGIPSSVVAQDLPANVAARI LIAHPFNPPELLPLVEIVPNEHTSEDVLNTVTDFYTQLGKVPVRLNREIPGFVINRLQWA IMKEASYLVKQGIVNPAQLDTAVRNSVGVRWASVGPFEAFHQGSDHGFRGLVDHVLSTFD SFETEATTFGDNSYTPVVDAVEESYGTTATEESKVARDRRLIAISDALTRADGNQRLAAV TETQNQADDEK >gi|294970553|gb|ADNU01000074.1| GENE 25 28826 - 29830 870 334 aa, chain + ## HITS:1 COG:NMB0034 KEGG:ns NR:ns ## COG: NMB0034 COG0672 # Protein_GI_number: 15675974 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Neisseria meningitidis MC58 # 3 302 2 273 279 112 31.0 7e-25 MFLASLLIGLREGLEASLIIGILIAYLGKLGRREAIRHMWSGVAIAVVLTAVIGAVSTFG RSRLSFKTQEIIGGSMSILAVIMITGMIFWMMSAGKKMKAALEGDIEKARARRMSVGLAV FAVAFVSVAREGIETTIILWGWVNNPLAIIGALVGVIVAIVLGWALFKGLIRFNLGTFFT WSGAALIVVAGGVLAYGIHDLQEAAVLPGPFSGAPITPTHPRTGEVLTGFFTYPFWGAAF PFGWAFNVSDVIDPSGVLATFLKGTVGFVPQMSWLEVLAWFVYMALVIPKFIRRVRENKH ITLAKKATPNAQEDPPKRPVVDTSGTNPQPAPTP >gi|294970553|gb|ADNU01000074.1| GENE 26 29876 - 31126 1500 416 aa, chain + ## HITS:1 COG:ECs1264 KEGG:ns NR:ns ## COG: ECs1264 COG2822 # Protein_GI_number: 15830518 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Escherichia coli O157:H7 # 13 412 12 372 375 194 37.0 3e-49 MKKIVRMSAVPVLALAATALAACEPNASDGALNVKATNTECAVSADTAESGTREFTIKNE GDIVTEFYLLGEDGLRIVAEKENIAPGSEATLSVSLQPGTYFTACKPGLRGENVGEAKFT VTGEPVEVSGEDKELFDKAVKDYIAFVKNEVAELEPKVGEFADAYAKGDDEQARKLYATT RTHYERIEPIAEALGVLDPRIDYREVDYLAEADILKKDDPTFTEWLGFHRMEKDLFPPKK GDKNADGADAFDGWKPSSPGDRKRIADTLKEDVHKLRETVDADNFIEDQQINIATVANGA SGLLEEVAVSKVTGEEDWWSHTDLYDFAANVEGSKIAFDLVKPIAERKGSEGEQLVKDIE QEYGELNKLLGKYGNLDKGFVSYDTVTAEQQAELTHQIDELREPLSKLTGTVLEIK >gi|294970553|gb|ADNU01000074.1| GENE 27 31126 - 32433 1076 435 aa, chain + ## HITS:1 COG:BS_ywbN KEGG:ns NR:ns ## COG: BS_ywbN COG2837 # Protein_GI_number: 16080877 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Bacillus subtilis # 8 435 2 416 416 273 38.0 6e-73 MVERQEQTGEEETPESARGVGRRGLLGAMGAGAAGLALGGVSGFAWGRERAQVPTTSAPK TFPFEGDHQAGIITEAQDRMHFATFDLTDGTTREDLIELLEEWTEAARRLVIGGEVSARG AFGGGPNFPPDDTGEAFGLDPAGLTLTFGFGRSLFVTADGKDRFGLRKHMPKEFVDLPVM TNDFLDPKRSDGDLCIQACADDPQVAVHAIRNLTRMGVGKTRIKWSQLGFGRTSSTTRSQ ETPRNLFGQKDGTANIKAEDTVALDDHVWINSGPAWAHGGSYLVARRINMTIEVWDTLQL AEQERVTGRFKHDGAPLSGGDEFTPVDFHKLNSRGRPLVEETSHVARVHPDNNGGIRMLR RGYNFVDGNDEQGRLNAGLFFIAFVNDPGRFARVHSNMSRDEMFVEYLKTTGSGVFLVPP GVGSDGYVGQSLLEA >gi|294970553|gb|ADNU01000074.1| GENE 28 32454 - 33278 790 274 aa, chain - ## HITS:1 COG:MT0232 KEGG:ns NR:ns ## COG: MT0232 COG1024 # Protein_GI_number: 15839602 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 1 273 1 261 262 235 54.0 5e-62 MTQNENPAGTQPDTAPATNAENQVVLTEVVDNVLVITLNRPEAKNAVNKDVAQGVASAID RFNDDDELAVAVITGAGGTFCSGMDLKAFVRGESPSVEGRGFAGLTEAPPAKPLIAAVEG YALAGGFETMLACDLVVAADNAKFGLPEVKRGLVAAAGGVYTLPERTHRAIAMEMALTGD LYPTEFVAGHGLINRVVPAGQALEGALELARTIAANGPLAVRTSKQIIVESADWASDEKA AKQEPLTRDVFSSHDAIEGSKAFAEKRAPRWTGK >gi|294970553|gb|ADNU01000074.1| GENE 29 33417 - 33680 295 87 aa, chain - ## HITS:1 COG:SA2195 KEGG:ns NR:ns ## COG: SA2195 COG4115 # Protein_GI_number: 15927985 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 4 85 6 88 88 94 50.0 4e-20 MALLVWDEHAWGDYVWWQKEDRRTLKRINQLIRDIARNGNDGIGKPEALKHSLSGYWSRR ITGEHRLVYRIVDDEIRIASCRYHYEP >gi|294970553|gb|ADNU01000074.1| GENE 30 33683 - 33937 237 84 aa, chain - ## HITS:1 COG:yefM KEGG:ns NR:ns ## COG: yefM COG2161 # Protein_GI_number: 16129958 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Escherichia coli K12 # 1 83 10 92 92 78 50.0 3e-15 MKTMSYTESRANYAKVLDAVVNDREETIITRAGHEPVVIVSLTEYESLRETAHLLRTPAN ARRLLDSVERLEKGRGTRHDLIED >gi|294970553|gb|ADNU01000074.1| GENE 31 34158 - 34787 502 209 aa, chain - ## HITS:1 COG:mll7734 KEGG:ns NR:ns ## COG: mll7734 COG1309 # Protein_GI_number: 13476418 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 30 209 19 197 213 83 30.0 3e-16 MKPETSPNEASSPAIWRDYSDNPWTPVLGAALRCFARAGYHGTSIRSIATEAHLSVPGLY HHWPSKQAILQALLAQGMEELWWRTELAREEAGPDPLTQFTNVMNCMLWFHTVRKDEALV NASEIRSLDAEGLATHRKARLRQQKQIDGIVVAGAKAGVFTAPYPLDASRAVVSMCVSVA SWFQPDGELTAAQVVERYTDLCLRTVGAK >gi|294970553|gb|ADNU01000074.1| GENE 32 34881 - 35102 60 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTATFPARVFESPAALEPFEALSIANLPCFAVPGAGAVAGVGAETLNPNYTDRPDTTPI DRSVSFKYLYSDH >gi|294970553|gb|ADNU01000074.1| GENE 33 35029 - 35829 265 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 20 257 4 238 242 106 33 3e-22 MDNASNGSSAAGDSNTLAGKVAVVTGGSRGIGLAIAQELVSQGARVIITARGQENLDAAV STMPRGSALGIAGKAHDPEHRAQVLDTAAKEFGGLDILINNAGINPVYGKLEDLDLGAAS KIFEVNVLAQLAWVQAALKHPDLKFRERKGSVVNLSSVAGETPPPGIGFYGVTKAAVSHL TRTLAVELGPDIRVNAVAPAVVKTDFAKALYEGKEEEVASAYPMARLGVPADIAQAVAFL VSDNASWITAQVLLVDGGLTAAGGTA >gi|294970553|gb|ADNU01000074.1| GENE 34 35826 - 37007 992 393 aa, chain + ## HITS:1 COG:DRA0194 KEGG:ns NR:ns ## COG: DRA0194 COG3173 # Protein_GI_number: 15807860 # Func_class: R General function prediction only # Function: Predicted aminoglycoside phosphotransferase # Organism: Deinococcus radiodurans # 69 376 38 345 386 165 33.0 2e-40 MNDTTSNPQNTPAANQPATQADTSGKSGTTSAEVVPTFDGVLTGSAAPVLVLDRIEAFLD EHGLGAGPVEWERVGGGQSNITFVLSRGGEKFVLRRGPRPPLPKGTHNMVREARVQQAVA AQGVPVPKILAVGEDESILGVNFYIMEFLDGFVIDSAEPANVTTPADRAHVMESFVDSLV KLHSVDVENPDVARLGKPDGYLERQVATFTRLWEVNSKREVPDVVELGRRLAADIPTSQL HAVVHGDYRLGNVMVRPEGSPDVMAILDWEMATLGDPLADLGYFLATYAEPGAGQPGGRE MTVMELSRVTTSEGYLSPEQVVERYSAEVAEVSGSAPDLSRIDWYKALALFKSCVFLEAM FTRWKAGERPGDDFAPRLEQGVPQLAARGLEWV >gi|294970553|gb|ADNU01000074.1| GENE 35 37293 - 38714 517 473 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 1 459 1 452 468 203 32 2e-51 MDTYTYTSLRYTAQALSRKEVSATELVDAHFARIDAINPQVNAVVTLDQDRARQTAQQID NDRASGKTLPPLAGVPMTHKDTHEAAGMRTTWGSPIYKDHVSHTDDLIIARMREAGIIPT GKTNVPEFAAGAHTFNPVFGTTVNPYNTTKSAAGSSGGAAVVIAAGVQAAGDGSDMGGSL RFPASFNNIAGLRPSNGWLPHLAPKNPYGWIAQSGFMAREVADIALLMKLASGPHPAGPV AVPPGSSTAWDDALTAENLTGVRVGFSTDLGGRVQVDAQVRHVIDAQAEVFAGLGAHVTG ACPDLDVARRLFRLERAFEFAFGFREAYELHGDLMKESLRTNIEAGLAMTPEEHFERVRL RGLMWPALAEFFDTHDVFVCTTSQVLPFDASEEFPTHINGEVMEDYLSWMESATLISATG CPAISVPAGFSEDGLPVGVQIVGRPGADAHVLRVAAAYEAATKHAWHHPPLQV >gi|294970553|gb|ADNU01000074.1| GENE 36 38780 - 40015 1101 411 aa, chain - ## HITS:1 COG:Cgl2031 KEGG:ns NR:ns ## COG: Cgl2031 COG1473 # Protein_GI_number: 19553281 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 23 364 22 367 421 257 40.0 3e-68 MPATTSAIMSQVPEFADYFVELYKEFHQHPELSMQETWTVERIEQELKSYGLEATRVGGT GTVTMIENGDGPTIGFRADTDGLPMVEKTGVDWASTVTTSDADGNKVGVMHGCGHDTHIT CALLLAKLMHENRDAWAGTLIIIFQPGEEIGAGANAMVEDGLWEKFPKPEAIFGQHIWPG LADEVTLSHGTAMSMADSLKVTVHGKQAHGSQPENAIDPIVLGAHMVTRLQTVVSREVAG SDMVVLTVGTFNAGTKENIIPQTATFKLNIRTQDEAVRERVLEAVDRILKGEAVASGAPE PTVEPMYRFPRCDNDVQLAKDLEQSFRESLGEDKVNISGPATGSEDFGILGDSIDVPYVF WFWGAYSDAKYKGPGSVAGNHSPFFVTDVPEQSLTTGIKVGLTAVLSRLGK >gi|294970553|gb|ADNU01000074.1| GENE 37 40083 - 40793 792 236 aa, chain - ## HITS:1 COG:no KEGG:ROP_26470 NR:ns ## KEGG: ROP_26470 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 8 235 16 243 244 200 49.0 4e-50 MAHTPSHATYQRTTFIWGNLTLAIGLIISTSLPIYLMYFADVDVSWSQVIKAFLAVFAVY GVFYVVEPLTYYPILGPAGMYQAFMIGNISNKLLPSAIVAQAAINEKPGSRKASYAATAA ICGAAYIHVISMFLFVGILGTWLVTVIPEHITDIARLYILPAILGGVAVQLIATVKQLRA TVIALACALFVVFGLIVWVPALKAGAVGLAVLMTIVLTWFLRKRDGSADMNAATIN >gi|294970553|gb|ADNU01000074.1| GENE 38 40804 - 41577 449 257 aa, chain - ## HITS:1 COG:no KEGG:AAur_0855 NR:ns ## KEGG: AAur_0855 # Name: not_defined # Def: putative integral membrane protein # Organism: A.aurescens # Pathway: not_defined # 1 250 1 246 253 214 53.0 3e-54 MHHKTNYELLASSSSQNAGPSVTEIANNPILWVLACSVLLVIVLQSAIYMRAVRQNAEAA DMTQAEVSKAFRAGSVAAIGPSLAVVLVAIALLPLFGTPPVLVRIGLIGSAATEVASASV AAGTTGAELGGEGYDANTFVIALAAMSISGAGWMIATLILTPIFQKSEAKMQRVNPALMT IVPSAALLAAFASLAVTEVPKSNVHFVTVITSAAVMGLCLWISKALNQAWLREWGLGISM FVGLAVAYFAHYNGLNG >gi|294970553|gb|ADNU01000074.1| GENE 39 41697 - 43580 1719 627 aa, chain - ## HITS:1 COG:RSc1762 KEGG:ns NR:ns ## COG: RSc1762 COG1960 # Protein_GI_number: 17546481 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 4 622 3 620 625 535 48.0 1e-152 MSKSVVFNERDAEYLLYEWLKVDELTQRQRFKEHSRETFDGILDVAKQIALEHFEPHFQK LDANEPRINADGKVELIDDVKLALDAFSAADLMSAAMDEKVGGFQLPMTVARAVYMWFQA ANASTYAYAGLTTAAAQTLYQHGSQELIDRFVPHMASGRFFGVMALSEPEVGSSLGDLTT RGEPQPDGTYRLFGTKMWISGGDQEISENIVALVLARHAGENAQPGPKGLSLFAVPKFIT DDNGDLGERNAITLVGLNHKMGNRGTTNTLLEFGDDKHRPVNAQGEPTSGAVGYLIGREG EGLALMFHMMNEARVFVGAAAASVGQRSHLTAVRYAGERRQGRLPQDKGHGGPMVPIVEH ADVRRMLLASKSYAEVSVALVMFCSRLQDEAQTAEREEDREAAALLLDVLTPIAKSFPSQ YALKASDLAIQVHGGYGYTRDFTVEQLYRDNRLNPIHEGTHGIQANDLLGRKVAMRGGAG LDLLVRRIAQTCEAAGAGAGAGADTQVWAAKLRDAVERAVQVTRKVHGRDNANAALKDAA LYLEAMGHIVAAWLWLDMVNTIDGPEAGAGEGGAASNDGAGSDATFYAGKRAAAQYFFEY ELPHAMTLLDVMENASDVLLDVDPKSL >gi|294970553|gb|ADNU01000074.1| GENE 40 44071 - 44949 925 292 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396582|ref|ZP_06806739.1| ## NR: gi|295396582|ref|ZP_06806739.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 292 1 292 292 435 100.0 1e-120 MFKKSPAKKVAKKSTATAKSFLEEVSDVASQIGKTVREGSAQALEATGPGLERANEFIHD ITDAAGPKLSQTSDRLHEVADRVRAQAGPRLQELSEQGRDRAAQASERVSGYSTKAASDA SKRFADTSSQVAGLLASASAPKGVEEFVGRVTGDKKAIKKAQKAAAKRAKELSKQASKTS KELAKSNKKSNGWNWVVWVLALGAIGAIGYFVWKKLQPVNDPWSEPLPGNRPADARPLGS HDAEESTATAPIVTEVEVPEGHGDDEEEDAEVVASDLEDVKDADASGTPGKH >gi|294970553|gb|ADNU01000074.1| GENE 41 45190 - 45723 587 177 aa, chain + ## HITS:1 COG:MT0011 KEGG:ns NR:ns ## COG: MT0011 COG0652 # Protein_GI_number: 15839382 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Mycobacterium tuberculosis CDC1551 # 3 175 12 181 182 181 62.0 4e-46 MSIATQQAILHTNKGDIKLNLFGNHAPKTVANFVELAEGTREYKDDAGRTNPTRYYDGLG FHRIIKQFMIQGGCPLGQGTGGPGYTFDDEIHPELQFTKPGLLAMANAGTRGGKGTNGSQ FFITTVPTEWLNGKHTIFGEVADEESAKVVADIEATPTGAMDRPQEPVVIESVEIIK >gi|294970553|gb|ADNU01000074.1| GENE 42 45733 - 46419 535 228 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 46 220 74 241 284 87 32.0 2e-17 MTDHPDHNEPPTNGGRSSFSHNSPEVGQTPVARRSPAVEALRKSPVTVTIAAVTVLVWLT QFVPGWHVQERLAFVPLWALDEPWRFATTMLVHSQPSPTHVLFNMMGLLIFGTFLERALG SVFFAVTYVLSGVGGSAMVWLLATQGIAHPFALYVGASGAVFGLVGVLLVPSKRLDRNWG GVVGFVLLNVLMLFVEPNIAWEAHLGGLIVGFILGAIRLWTMKRNDAK >gi|294970553|gb|ADNU01000074.1| GENE 43 46494 - 47108 574 204 aa, chain - ## HITS:1 COG:HI0522 KEGG:ns NR:ns ## COG: HI0522 COG2364 # Protein_GI_number: 16272466 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Haemophilus influenzae # 11 200 32 217 218 105 35.0 4e-23 MWVRLLALYGGLVLYGLSCRLLLQSDLGNMPWDVLHQGLSKMLGFSVGTCTVMVSIVVML LWIPIRKHLRPGLGTISNALLVGVFIDLWGLVIPVAPNLVLAVVFMVAGIVINALATALY IVPNFGPGPRDGLMTGLVSATGRPVFLVRSVLEVLVMGLGFFMGGRLFVGTILYAFFVGP LTQIFLRVGERMIGPASPFDSDDA >gi|294970553|gb|ADNU01000074.1| GENE 44 47178 - 47855 695 225 aa, chain - ## HITS:1 COG:no KEGG:Achl_0016 NR:ns ## KEGG: Achl_0016 # Name: not_defined # Def: hypothetical protein # Organism: A.chlorophenolicus # Pathway: not_defined # 151 225 8 82 83 95 49.0 1e-18 MAKPNRVQRTSRNKATQASRDAQAKDSAKQPVDSSVAEDTENVETAEVEDADVESATDAD KGSEAGSTAVGAKDAAEKDDAKSETTSAKKETSSEKDSSSKTGKSESTKSNKAGKDKKGS KETKSGKSESAKSSAKRTSRSGNPAKRASGRKTSSYSSADHGKVNRPNPRWFLPVMLGIL LLGLVWLVVFYISTGKWPVEAWGNWNLLVGFGIMVVGLGMSTRWR >gi|294970553|gb|ADNU01000074.1| GENE 45 48071 - 49249 1104 392 aa, chain + ## HITS:1 COG:Cgl2874 KEGG:ns NR:ns ## COG: Cgl2874 COG3764 # Protein_GI_number: 19554124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Corynebacterium glutamicum # 161 383 5 255 255 115 30.0 2e-25 MERARAEAEQARQAAQPASGQSGAGGAGGATPESDQPTEQFSPVTLPQTAYQAPAASRPF IRPAEPSATSAAANNSYSTQPGAQHNPQPGAQPGAQRDIDHTQPFQAVQGRPEDQAEQRP QDEPLPTRAEKREQDQAAHAQHRKNQKPERQPLGVVRGTIRTFGELCITAGLIMILFVVW QLWWTDIEANRDNENLASNLVTQWKDNPRDKTPNDPDTPVIAQTPEENQAFGIMYVPRFG DDYYRTIAEGVQLEPVLNRMGMGHYPSSARPGEVGNFAMAGHRVTYGKPLNLIAEMRPGD PVVIQTQEGFYTYTMRNFDIILPDQTEVLAPVPGFPEYKGKERLMTLTACNPMFSARERY VIYAELTEWRPASEGPPDAIKDSAAFKKAGGQ >gi|294970553|gb|ADNU01000074.1| GENE 46 49249 - 49449 286 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396588|ref|ZP_06806745.1| ## NR: gi|295396588|ref|ZP_06806745.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 66 1 66 66 114 100.0 2e-24 MYELIWRILPGNWFVKTLISLILIAGIVFVLMQYVFPVIAPYMPFNDATVEEGAFAPAQG LTGLGS >gi|294970553|gb|ADNU01000074.1| GENE 47 49446 - 50096 496 216 aa, chain + ## HITS:1 COG:ML0015 KEGG:ns NR:ns ## COG: ML0015 COG0512 # Protein_GI_number: 15826878 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Mycobacterium leprae # 4 195 3 193 232 201 52.0 1e-51 MTHILVIDNYDSFVYTLVGYVQELGADTTVIRNDDVNADQLDDYLPQFDGVLVSPGPGTP ADSGVCPQVIRWCEAHSLPMFGVCLGHQALAEVFGATVAHSPVLMHGKTSLVRHSESGIF AGCRNPLTATRYHSLAIVDSTLPTELFEATAHTDDGVIMAIEHRHATLAGVQFHPESVRT EDGYLMVGNFLARCGLADAPAKAAGRSPVATASLNK >gi|294970553|gb|ADNU01000074.1| GENE 48 50118 - 51989 1372 623 aa, chain - ## HITS:1 COG:ML0016_1 KEGG:ns NR:ns ## COG: ML0016_1 COG0515 # Protein_GI_number: 15826879 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium leprae # 7 456 7 421 424 315 42.0 2e-85 MNAERILSGRYEIKELLGRGGMAEVHAGWDTRLGRRVAIKLLRSDLARDPSFHERIKREA QSAARLNHPGIVGVYDSGEETFTESGGGEVQVPFIVMEFVEGQTLREVITQHGPLTTQES LDVVAGILAPLDYSHRKGIVHRDIKPANVMLTPEGDIKVMDFGIARALEDTSSLTQTQSV VGTAQYLSPEQAKGEVVDARSDLYSTACVLYELLTGRPPFVGDSQLAVAYQHVGETPKAP SELNHNLSPAVDRLLMHALQKERDDRYQEAFTFREDVLCARDGRPMSIDSEATTQLMNQP YASETATRVMATPADYQPEYGSGSAHASQPGTEPGIMTSAVATVQEEEPDPERDRKRRGL MWTGIAMIVLVLAGLAFWVYQASKPPEIVTVQLADLSDKSVEEAKAYLQQNNLVAKEEEV ADNDIKEGNVVSTDPGPGTEVPEGETIVLKVSTGPEDVKIPDLKGMSEAQARQELEKVGL NAGSNIEENSPDEDKGTVLSTEPKKGSTVKAGSTVDLVLSSGKVKVPDVIGMTKDDACGA LEDKKTQLKCDVKEVETSDHTEGEVFEQSLQGGSTADQHSTVTIRVAKAPPPPSPEPSEA PEPSRPPFFPPAPSENDVQQRIP >gi|294970553|gb|ADNU01000074.1| GENE 49 52068 - 53612 1542 514 aa, chain - ## HITS:1 COG:ML0017 KEGG:ns NR:ns ## COG: ML0017 COG0515 # Protein_GI_number: 15826880 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium leprae # 1 314 24 333 437 221 44.0 2e-57 MGEVWRGKDTVLDREVAAKIMKEEYRTEPGFLARFKSEARSMGSVSHPGIAAVYDYGEED GAPYLVMEYVPGEALSTILERNGGLPEGDALEIVAQAAEALNAAHNAGVVHRDIKPGNLL ITPDFKVKITDFGIARVADQAPLTKTGQVMGTAQYLAPEQATGKGSRPQSDLYSLGVILY EALAGVRPFTGESQVEIAIAQVNRKHPPLPQSVSEPVRRLVDATLSKKPEGRPESGKALA TAARALIAGDVAAAEAAVPQMNPRPETASEAVTRVFNQPAPTQATQVLPQTAVNPVVEDP EAGTSDVEEPQKKSKGAAIAIVILSILAIAAIAWAVWQFAKTDEEPNPETTATATPTEEN KTVTINPDDYVGQTATTAKRNLENLGLKVKHVDVESSKRSGRVVNVREGNRGYTFEEGDT VTIEVSTGPSEPEPKPEPTQKQKPKPTKQAPGEGSDSGDNGGDNGGNGSVDGTGSDGSGS DGGQDKGDSGDSGDGDGSGGNDNAPKPEKTAGGN >gi|294970553|gb|ADNU01000074.1| GENE 50 53678 - 55147 1248 489 aa, chain - ## HITS:1 COG:ML0018 KEGG:ns NR:ns ## COG: ML0018 COG0768 # Protein_GI_number: 15826881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 1 487 1 488 492 321 38.0 2e-87 MNKPLKHVAVVGFVMFAFLFGSTSYVQYFSAESLNENPLNNRTVLEELSRNRGPILVDGE PVALSTPVDDQYKFQRAYGSDNLPAKMYSPVTGFFSITSGATGLERTEGSLLAGTDDKLF YDRVSGWLTGQEPTGAAVELTLNPKAQRAAYQALDGQKGAAVAMNPKTGEVLAMVSTPGF NPNDMATHNRKDAEAAYKSALKDPDRPLYNRAIGGNLYPPGSVFKLVTAAAAIESGDYNE DTEIDAPNALKLPQTTHTIKNAGGSTCADGKKATLKHAIMKSCNTPIAKLGMDLGADAMN KQAEKFGFGDNFTMPLRVSASTFPESPNEPELAQSAIGQFEVKTTPLQVCMVTAAIANGG TEMRPNLISEVRNARTLETIEKPRPREYSRPISKDTARQLSDMMVDVVDKGTGTAAQISG VKVAGKTGTAQHAQGAAPHAWFTGFAPADDPQVAVAVVVESGGNAGNQASGGRVAGPIAK KIMEAVVNE >gi|294970553|gb|ADNU01000074.1| GENE 51 55144 - 56727 1470 527 aa, chain - ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 32 460 17 447 469 348 47.0 1e-95 MSVATWSVDAGGDQGTYRNANAQSPQTKGPRTYRIAELFLILLAIAVSAGAYALVGLGTD KQIPANVIEYSVWLAALSIILHAVTWWRAKYADPVIVPIAVLLNGLGLAMIFRLDQAKDT HVAVNQLIWMTLGVLLASATVIFVRDHRVLRRWTYTFGLAALLLLVLPLVPGLGKTINGA RIWIHLGPFSFQPGELAKIFLAIFFAGYLVTFRDQLTAAGKKFLGLSFPRLRDTGPIAIA WVASVGILVFQRDLGTSLLFFGLFVAMLYIATNKKSWILIGLTLFVAGAVVASQMFSHVN QRLSGWLNALSPEEYNKSPGGSYQLVQGLFGMAKGGLVGTGLGEGRPNVVPYAESDFIYA SLGEELGLIGLFVILILYVILFQRGFKTASELRDGFGTLLLAGLSFTVALQTFIVVGGVT RLIPLTGLTTPFLAAGGSSLVANWIIIGLFLRASDNARRPAEELATGVLRVAPSRVSERK SGKGTGGSNAEAAPTSSARSTSAAEDAQTDQAGSEAPTTVLNQKEVE >gi|294970553|gb|ADNU01000074.1| GENE 52 56724 - 58397 1342 557 aa, chain - ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 4 241 3 237 237 220 55.0 6e-57 MTDFVFNSAVRSNVGLVRKNNQDSGYAGRNFLLIADGMGGHAGGDVASAIAVARLASLDH GDHTGESLDSLRSTILDANDRIARAVEDEPQLGGMGTTVTALLRCNDRLALAHIGDSRAY LLRDDSFSQMTTDHTFVQMLVDEGRITPEEAEYHPQRSVVMRVLGDVGASPELDMSVREA RIGDRWMLCSDGLTGFADLDVIEEALRSIDDPGECADRLVNMALEGGGADNITVVIGDVI DATDLTDEDLDAPGQFGGSVEINPQFAQLGTVDNDTPPVEDLETEALPQVDEDTAEVASN SHDDETPADGASDAGAGTATNSEKASDGADEETAEAVSTTAVGAAASSAAAVAGDGKRGG RGKARATKSRKRKDLGADTDDFDEFSDEEPRRRWIPWAIAGAVIVLLIVAGFAGKAFIQS QYYVTEENGKVAVYQGVSQNLGPFKLSNLNETTDIEVEYLPAYTQSRLKETIPASSHDEA QKIVENLRSAADKTRQQSVSGGATDGSSTDPAPSAPGEPGNNPENNPAQGTQQQPGQPDQ PNQPQQPAQQAEQGENP >gi|294970553|gb|ADNU01000074.1| GENE 53 58394 - 58921 427 175 aa, chain - ## HITS:1 COG:MT0022 KEGG:ns NR:ns ## COG: MT0022 COG1716 # Protein_GI_number: 15839393 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis CDC1551 # 10 174 10 154 155 97 35.0 2e-20 MTEFTVVALRFGLFIAMWVFVFMVAGVLSRDLFGPRKVRAGKRRKRAKAQQSAPATQQPV GAGAAADATAPAAHQPSNFASELVVTSGPLSGTVIALGDAPITLGRSRENTLVLDDDFAS GFHAKIGPDGRGGWYVEDLGSTNGTFMGQHQLEAPTSLGVHMPVTIGNTTVELRS >gi|294970553|gb|ADNU01000074.1| GENE 54 58918 - 59883 759 321 aa, chain - ## HITS:1 COG:no KEGG:SCAB_45471 NR:ns ## KEGG: SCAB_45471 # Name: not_defined # Def: hypothetical protein # Organism: S.scabiei # Pathway: not_defined # 27 317 1 279 280 169 38.0 1e-40 MQLTQLQRVAGTANGTQPDSEQGEANVGVLDRFEKGIERVVNQTFAKAFRSQVEPVELAG ALKKEADTHAAVVSRGRTLTSNNYVIELAASDFERLDSLSEELTADLRQVVGEHAIEQGY SFVGPVTVTLEPADDLDTGIYRVRASTRRPDGTLAAQPSGRGGYDPPSRSNPIVPEAYES AQNAHRTGANPVVASAASAQAAPASGAPANPARGGGNPVRGRTVPRFGVKVNGQFTPLRQ GTTVFGRSSQSADFVLDDPGISRRHFEITIDGTHATATDLGSTNGTLHNGHRITSITLTD GVTLTAGDTSVTFCSMEMGRR Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:13:49 2011 Seq name: gi|294970528|gb|ADNU01000075.1| Brevibacterium mcbrellneri ATCC 49030 contig00110, whole genome shotgun sequence Length of sequence - 25626 bp Number of predicted genes - 23, with homology - 22 Number of transcription units - 17, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 16 - 1011 904 ## COG2409 Predicted drug exporters of the RND superfamily + Term 1234 - 1272 0.0 - Term 1050 - 1106 11.0 2 2 Op 1 . - CDS 1136 - 1495 325 ## COG1725 Predicted transcriptional regulators 3 2 Op 2 . - CDS 1554 - 2591 1101 ## gi|295396600|ref|ZP_06806756.1| brp/Blh family beta-carotene 15,15'-monooxygenase - Prom 2620 - 2679 4.1 + Prom 2569 - 2628 1.8 4 3 Tu 1 . + CDS 2692 - 3606 878 ## Namu_1709 hypothetical protein 5 4 Tu 1 . - CDS 3498 - 3710 171 ## - Term 3854 - 3880 -1.0 6 5 Op 1 . - CDS 3946 - 6516 1141 ## FraEuI1c_6934 hypothetical protein 7 5 Op 2 . - CDS 6476 - 7444 227 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Prom 7483 - 7542 3.5 8 6 Tu 1 . + CDS 7714 - 8103 482 ## COG3296 Uncharacterized protein conserved in bacteria 9 7 Tu 1 . - CDS 8185 - 9312 396 ## RHA1_ro03549 hypothetical protein 10 8 Tu 1 . - CDS 9415 - 9576 62 ## gi|295396607|ref|ZP_06806763.1| conserved hypothetical protein + Prom 9682 - 9741 4.9 11 9 Op 1 25/0.000 + CDS 9792 - 10721 835 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 12 9 Op 2 42/0.000 + CDS 10718 - 11473 208 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 13 9 Op 3 . + CDS 11470 - 12372 665 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 14 10 Tu 1 . - CDS 12348 - 13031 516 ## COG1321 Mn-dependent transcriptional regulator - Prom 13166 - 13225 2.2 + Prom 13166 - 13225 3.8 15 11 Tu 1 . + CDS 13320 - 15584 1595 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Term 15587 - 15631 7.0 16 12 Op 1 . + CDS 15905 - 16294 303 ## COG1725 Predicted transcriptional regulators 17 12 Op 2 . + CDS 16306 - 16680 274 ## gi|295396614|ref|ZP_06806770.1| conserved hypothetical protein + Term 16682 - 16719 1.5 + Prom 16684 - 16743 1.8 18 13 Tu 1 . + CDS 16951 - 17241 156 ## COG4194 Predicted membrane protein + Term 17292 - 17329 8.5 19 14 Tu 1 . + CDS 17410 - 17784 126 ## gi|295396616|ref|ZP_06806772.1| resolvase helix-turn-helix region 20 15 Tu 1 . + CDS 17853 - 21056 1701 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits + Term 21218 - 21254 -1.0 - Term 20895 - 20937 -0.7 21 16 Tu 1 . - CDS 21119 - 24034 1194 ## COG1061 DNA or RNA helicases of superfamily II 22 17 Op 1 . - CDS 24613 - 24777 71 ## pnf2690 hypothetical protein 23 17 Op 2 . - CDS 24814 - 25101 311 ## pnf2690 hypothetical protein Predicted protein(s) >gi|294970528|gb|ADNU01000075.1| GENE 1 16 - 1011 904 331 aa, chain + ## HITS:1 COG:Cgl0608 KEGG:ns NR:ns ## COG: Cgl0608 COG2409 # Protein_GI_number: 19551858 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Corynebacterium glutamicum # 33 327 385 703 712 169 38.0 7e-42 MASNVVRKPAASLLAGLALLGVMATGLLGTSVGLDQIEKFRVKSESATGFEVLSQHYAPG EAQPIWVVANTDKAQDVVDKTENVEGIVRAHPVAETDDGTLTKIMVTSEYAPSTAESLAQ IRDLREAVHGVSDAEAVVGGAVAEDLDARDGNKQDLFLIAPLILGVCFVVLLVLLRSIVA PVLLLLVNLTSTVAAIGAGAWLSRVFLDQQALDLQVPLLAFLFLVALGIDYTIFLVHRAR TEAKVHGTRNGMVEAITHTGGVITSAGVVLAAVFAALGILPLVTLGQLGLIVGVGVIVDT LVVRAVIVPSIFTLMDDKIWWPSKAPNAGSR >gi|294970528|gb|ADNU01000075.1| GENE 2 1136 - 1495 325 119 aa, chain - ## HITS:1 COG:MT1186 KEGG:ns NR:ns ## COG: MT1186 COG1725 # Protein_GI_number: 15840592 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 2 76 7 81 121 79 54.0 1e-15 MLRIDPAGATPPYEQLRSQLIQQIESGELPPGSRLPAVRRLASDLGIAPNTVARTYRELE TQGYVKTAGRKGTIVSEDTSAAPALTATRDCARQLVDMGVDAESAVRMLRRAFAEVAQR >gi|294970528|gb|ADNU01000075.1| GENE 3 1554 - 2591 1101 345 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396600|ref|ZP_06806756.1| ## NR: gi|295396600|ref|ZP_06806756.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] # 1 345 1 345 345 620 100.0 1e-176 MNTTIWIIISVGVLFATAPVTSGMRKVNEKELAKYANKQKLPTPNHLRPALIERITQRER AALTCGIAGIVISFVIGAILQTAFGGWDADMPIAGPLTLMGVAFGGGLGGLVATYRTKPL APEQPRVARPIETTLGDYVSKGERIALWLAPVSIALSTAAMWIIAARTPGVIAEYSNQFV MLTVVAGFLLLLWGAMLFACTHILNRPQHAGDDLELAWDDAERTVALRGLIDNAIAMAMV SALVTLVGVANVIISPQVREGAQDLTAGLGGLAFITGLVCWAIVLIPYLTGRFNPTPWRK LWAGKDFGTTSDATASEAGHTDAGGTDATDTHASPNTANTSDENA >gi|294970528|gb|ADNU01000075.1| GENE 4 2692 - 3606 878 304 aa, chain + ## HITS:1 COG:no KEGG:Namu_1709 NR:ns ## KEGG: Namu_1709 # Name: not_defined # Def: hypothetical protein # Organism: N.multipartita # Pathway: not_defined # 35 302 14 279 289 221 47.0 4e-56 MSDLTDKSKDVADQAQDVADKAENVAHKAGDAHSETAEKAGEVIQQNPVYRGFVTVGLLA YGVVHLVIAFICVQIAWGGGASGQEASNSGATQQIAQQPFGYVVLIVCAVGLAALVVWQL IEAAIGNQQYSGAKRLFKRIASVGRSAVYAFLCASAVQAVAGAGGDSEEKQESMVGQVLG MPGGVVIIAVVGVVVAAVGVGQIVSGVKKSFEDDLDGGVAQWVKRLGQIGYITKGVAIIF VGGLFLWSSITHDPEAAGGTNPALRTLVDQPFGPYLLTVMALGIVAFGCFCLVWAFNARH EKAE >gi|294970528|gb|ADNU01000075.1| GENE 5 3498 - 3710 171 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNEHPAGDMDYYQFDATANVIKTDHTPALRFRANHSAFSCRALNAHTKQKHPKATIPNA ITVSKYGPNG >gi|294970528|gb|ADNU01000075.1| GENE 6 3946 - 6516 1141 856 aa, chain - ## HITS:1 COG:no KEGG:FraEuI1c_6934 NR:ns ## KEGG: FraEuI1c_6934 # Name: not_defined # Def: hypothetical protein # Organism: Frankia_EuI1c # Pathway: not_defined # 12 848 1 849 855 892 56.0 0 MSHLPRVERQALAEAHRNLDHLYIEGYVETADFHRVGGGPDKSIRQVNRRDHGTRLKKAA ENVFSTFDQQMTDLEMPSYEELRATGTILVLEGEGSAYPLKVESLNSYTGGKVRKPKWLL LSVRKAQDENPETATVWISDSYRSQFLKLFEDYLNDEKNTKKGRPKNQDLVANIARIRQA VLDDLWTSEMQPLKTGLHWWELWLDDSGAHLADWERFVTTHQLQTRRSEFRLGDRLVVWV KASWSQLQILPFTSVPLAEIRHPQFIDTVEDLSTSEQDEYVEDLAQRIIHASADVPTVCH LDTGVLRTHTLLGGSLAPNDHHSIFGGSGTDVHPSGHGTSMAGLALFGNIDSLLTARTSV ALRHRLESVRMWPGPGDQLIDPIDYGTATVEAVSHPEVARPDRHRTFCLTLSTDPDKPGE PTLWSASVDALAAGTDIVRRGNELQLLSTPDPASGRLIVVAAGNVPDYATDHHTNSENSP IQDPAQAWNALTVGAYTELTDAPSHPQYSGWNVLAESGDISPHTTTSLYFNMTRWPIKPD ICMEGGNVLTDGASTFEDKLPSLSLRSTGHKNDVALTSANATSAATAQASRLAAMVMDRY PSYWPETVRGLLTHSAEWTDSMVQQLASDQTKTGRQILLRQFGWGVPSEKAVLNSRRDAV TLIAQDSFVPFSGDKYSMRHFRLHALPWPTDVLQSIGAAEVRLRVTLSYFIEPSASRRGW RSKYQYASHGLRFDLQGRLENEAEFIQRINREAQNEEGGPRLKESDRWFLGERARHLGSL HQDEWIGTGAELAHCNSVAIYPVGGWWKNNSRKDRRDLPVRYALLLSLQTKEQDVDLYTP IATQLEIPVTAEISAP >gi|294970528|gb|ADNU01000075.1| GENE 7 6476 - 7444 227 322 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 54 309 126 389 636 92 27 3e-18 MAGNGQHIAAMVRSHASGDDDSFYSVALQVAAREAKAGHHVLANDIKKAVDASREREPVG KITPLAQPRGELAELVEVTYADVRLRELVASAELATQIKQVLAEQRQRKNLLEYGFAPAH RLLLEGPPGTGKTMTAAVLATELAIPMFTVRLDSLMSKFMGETASKLRLIFDSVAHRRAV YLFDEIDALGADRSGNDVGEARRILNSFLVFLEEASAESLVLAATNHRSILDKALFRRFD AVLTYSLPDARQAVAVMRARLGTLASGTSMAKLGEYTVGLSHAELVKAAETAAKTILLRG DNRVQREDLIVALTSRRTASLG >gi|294970528|gb|ADNU01000075.1| GENE 8 7714 - 8103 482 129 aa, chain + ## HITS:1 COG:PA5333 KEGG:ns NR:ns ## COG: PA5333 COG3296 # Protein_GI_number: 15600526 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 129 1 123 123 66 30.0 2e-11 MNETYSTHQTTDPSTERTWAILSHLSLIISSVVSVGMLSFVGPLIVWFIYKDKSDFVRNA AAGSFNFAVTLALASAAATVLAFTVILLPVSFIIWAIVYIVSIVIPILAAMAASRHEMYR YPLTLPLLR >gi|294970528|gb|ADNU01000075.1| GENE 9 8185 - 9312 396 375 aa, chain - ## HITS:1 COG:no KEGG:RHA1_ro03549 NR:ns ## KEGG: RHA1_ro03549 # Name: not_defined # Def: hypothetical protein # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 11 351 4 341 367 319 55.0 1e-85 MHDQDRQHRLADALLSGPRGRRLLLEYALASERIEGKDERDDSLSLAVFIASYHLDLRSG STSGALMGPGAAEIRKTVVTPEETAARLEGVVLAEVTPRSLLSGLSSSVEMAAYWQEPQG DDVLAATDPMRAGLRRVAEHLAASTHTDWWTTPVEASSQCTVQWDGEFRRVPEDPLRVLR KARAKDADEEKLAARERPTDPTASGSGIWWSTPPRELPSSTREMFDTSPVGLWLVEDSLG WETAETLRLEVPEGLRVYEIDSAEAWAELCRRFPFEQTAQKRHDWYLTTGRNGKWVVPDW AKVAEHYDAVHLQVAAYLAAAGTAIPVDADRATVIAGWGPDETYWFTPRVNHLGTPTAWI LTEDSIDYLWERRPN >gi|294970528|gb|ADNU01000075.1| GENE 10 9415 - 9576 62 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396607|ref|ZP_06806763.1| ## NR: gi|295396607|ref|ZP_06806763.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 4 53 1 50 50 78 98.0 2e-13 MRGVIAAVFATFTALFAHVVGGAPMPGWLSIVAPLNLSIFMCTVLAGRHVDLS >gi|294970528|gb|ADNU01000075.1| GENE 11 9792 - 10721 835 309 aa, chain + ## HITS:1 COG:sll1598 KEGG:ns NR:ns ## COG: sll1598 COG0803 # Protein_GI_number: 16330511 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Synechocystis # 9 304 11 322 330 318 52.0 6e-87 MRKQIGTVLVAICAILALTLTGCGNAKNGAKASNGGKPTVLTTFTVLQDIAQNIAGDHLQ VESITKAGAEIHDYEPTPGDVRKASQASLILDNGLGLERWFEQFVEEAKVPHAVVSEGVE LMNISEDAYAGKPNPHAWMSPKNVQLYVDNMVKAFSELDPEHADDFASNAKGYKKSLQGI HDELTHELADVPKEKRALVTCEGAFSYLARDAGLTEKYLWPVNAEEEGTPKQVASAVEFV KKNSVPAVFCESTVSLKPMQQVVDATPAKFGGTLYVDSLSEADGPVPTYLDLMRHDVRTI AAGLTGKNS >gi|294970528|gb|ADNU01000075.1| GENE 12 10718 - 11473 208 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 226 1 224 305 84 29 5e-16 MTTAIETSQLTVDYGSVRALENASMTVAAGKVTGLIGMNGSGKSTLFKALTGMVQPTSGT ILLDGQTPARARRKGLLGYVPQSEDVDWSFPLSVAEVVMMGRYGRLGLTRRPRAADREAV TEALNRVDLEPFAKRQIGQLSGGQRKRAFLARGLAQGADIVLLDEPFAGVDKRSEATIVR LLREFAATGGTVLVSTHDLHALPGLADEAILLKRTVLYSGSVAEVLSPQRLTEAFGLNPL GKGSWDGQVVA >gi|294970528|gb|ADNU01000075.1| GENE 13 11470 - 12372 665 300 aa, chain + ## HITS:1 COG:sll1600 KEGG:ns NR:ns ## COG: sll1600 COG1108 # Protein_GI_number: 16330509 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Synechocystis # 7 279 14 287 306 239 48.0 6e-63 MTIYDLLLVPLSYEFMSRALVATVIASVVCALLSCWLVLIGWSLMGDAVSHAVLPGVVLA YILGLPFALGAVVFAFITVGLIGAVRFNTRIKEDTAIGIVFTTLFAGGLVLISVTPSQTN LGHIVFGNILGISTSDLVQIGVLAAVALAILVIKRRDLTLFAFDPTHARVIGISPRRLGA LLLGVLALTTVIALQIVGVVLVVAMLIIPGATARLVTEKFSRMLVIAPTLSAGCSIAGIY LSYWFDASPGGLIVLTQGCVFTCAYLCAPRHGLIANWRRSRLNARATQSTTKPQLAASDT >gi|294970528|gb|ADNU01000075.1| GENE 14 12348 - 13031 516 227 aa, chain - ## HITS:1 COG:MT2858 KEGG:ns NR:ns ## COG: MT2858 COG1321 # Protein_GI_number: 15842326 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 5 222 9 226 228 206 50.0 4e-53 MSVSELSTSAQNYLKVIWGLTEWSSEPVTPTRISERIGLKLSSVSDAVRRLASQGLLTHA PYGSVELTESGRKYALAMIRRHRLIETFLVETLGYTWDQVHDEAESLEHAVSDFLIDRID VLLDHPTRDPHGDPIPSKDGKLDVPDAQTLSEVGPGKDVVVERISDSDPTLLKYFSEQEI CVGVRLAVAEGGPFSDALLVTPARRGAKTVPLGRSATDVLYVSLAAS >gi|294970528|gb|ADNU01000075.1| GENE 15 13320 - 15584 1595 754 aa, chain + ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 27 656 21 624 694 296 35.0 1e-79 MQLPVYRSVLAGIAALAVAMGPTAAHAASVPSPTAAADSANVVSLDLYNLTDVHGHIEQK TDDDGNIVEAGAASMKCYLDRARTTNPNSTFTLLGDNIGASTFTSGILHDNPTVDALNAL NPAASTIGNHELDDGQDVFRARTKGATLNGVSYSKFGFPYLAANVSGSLDDVLGDHKIVT TAAGVRVAFIGGIAQDVPYKLSPGTTAGMKFADPAEVTNKQAQKLKESGKADVVVAMIDD DAANTYPKMGKYVDALMGGDTHVPYKFENVKGSQGNTLVATASGSYMDNLSKVSVQFDTK TKKVLSSDVELIPAAKVAECGEDASVAQMVATAKKKADKEGEKPVAQGYKQGFARGVFAA NDKENPVPGSNRGIESTLGDMVADSMKDTVLTKDGSKVDIGIINAGGLREDLRPRKDGSI SYRQVFDVAPFGNELGYVTVSGADFKKALEQQWKTDLNSQNSRPLLKLGLSSNVRYTYDP SAKYGERITSVYVNDEPLDLKRKYTIGSVTFLLEGGDSFDALTAGKNLVNMGNLDRDQLA KYLGEKVREPRAQKSSVGVTVGAPNKQGDIPVDMRGLSFSEGPGVTKKVTVTIGDVERTA DVNNSLVEPKANTTDSIITTDGAGQAQVSFKKEEVCGTRTGRQDFSVAVATDFGTSVSPD QLKTEIDCGAETQPRPTDNGDSRDDDKDGSDVRPSETPGDEPSDDQSSDAPAHAEKDSGD MPRTGANIVQSAAVALVLISMGAITIAMTRKTRR >gi|294970528|gb|ADNU01000075.1| GENE 16 15905 - 16294 303 129 aa, chain + ## HITS:1 COG:CAC0599 KEGG:ns NR:ns ## COG: CAC0599 COG1725 # Protein_GI_number: 15893888 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 2 118 5 119 125 65 28.0 2e-11 MLDPLSTVPLYQQIRDRVVEAIGRGELHRGDALASVRQLAGAFAINPATVSKAYDQLRSE GLVATNAKSGSFVATDRDTAVAPPDYLAGFESRLTTLLAEGRARGLSPTALQDMCGHVMR SLDPPEEDQ >gi|294970528|gb|ADNU01000075.1| GENE 17 16306 - 16680 274 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396614|ref|ZP_06806770.1| ## NR: gi|295396614|ref|ZP_06806770.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 124 2 125 125 179 100.0 4e-44 MIVMLAALGLTMAVTVAVPEMSRPTLPLGVSVPSDRVGDPAVRSAIRRYRIWILVGGVVA VAVMVSAVSIPEVSVLILLGYVGWTVVAFAVCRKPIMVAINYHSLPDPMPTHYDAEGNVT SWKP >gi|294970528|gb|ADNU01000075.1| GENE 18 16951 - 17241 156 96 aa, chain + ## HITS:1 COG:SSO1590 KEGG:ns NR:ns ## COG: SSO1590 COG4194 # Protein_GI_number: 15898405 # Func_class: R General function prediction only # Function: Predicted membrane protein # Organism: Sulfolobus solfataricus # 36 92 290 346 347 60 49.0 7e-10 MMTASSLPVIWLVIDSVRQSRALKSTPAGSGPQSPDDDHLWRWGIFYENREDPRVWVEKR NGVGLTVNIGHPGGIALMGVVALLVLATIALVITVL >gi|294970528|gb|ADNU01000075.1| GENE 19 17410 - 17784 126 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396616|ref|ZP_06806772.1| ## NR: gi|295396616|ref|ZP_06806772.1| resolvase helix-turn-helix region [Brevibacterium mcbrellneri ATCC 49030] resolvase helix-turn-helix region [Brevibacterium mcbrellneri ATCC 49030] # 1 124 1 124 124 222 100.0 6e-57 MHQSIRIRVLKAGHEESLPRRLPRAVKDLLDVAQRQYEAGATLRDLANELGIGWGRLALL LRDRGVRMRRATAPPDEVREMAHRYASGESLERVDKHLGFSPSTVHNHLRFADIVLRDAH GCGK >gi|294970528|gb|ADNU01000075.1| GENE 20 17853 - 21056 1701 1067 aa, chain + ## HITS:1 COG:SA0089 KEGG:ns NR:ns ## COG: SA0089 COG1112 # Protein_GI_number: 15925797 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Staphylococcus aureus N315 # 692 1048 669 1030 1050 221 36.0 4e-57 MELDRVKDERLRILSFWWMLELFSPQQVPALTRQATRPSDRQVIAWQAGDPLPWEMLAPP EPFNGTRRVWRHTVYLGVYKLEATYDALGRVFGEDPDAYNRRPDGEGACAGILIDHDGRL VTDSAVLSSALWAAGRTRDPGPSNPYWMDGFDAAAQEFVDSIDAFEGARRDADGREQPPP YDSDSLNKLLKLSYVAAGVDGFDDLAADRVVIDSVAVSARRAEDGTDTDFLNSFYLDDLA VVRDHVARGDLGAGLAAYLTSDQTLPVFDRIDVVTRPDAVDAGTGIEHLPKGRWPANPEH SLALSQQFAVNRALNDLGPSSGLMGVNGPPGTGKTTMLRDILAGNVVERARRLAALSQPS HAFTEITHRWSDGEGHDRIVRQLKPELTGFEMVVASANNAAVENVTTEIPDENAIEAPWR GHIDYFGDIATKILQDVAANNSTSNTTPPTAWGLVAARLGRKKNRSDFHSAFWFDEKDPK TKQPVENGVPRIQTRLTQWRDGEVPYTPWAQAREAFHAAEQRVDALIQQRAQAQDRLRRV PELAERERGLEAAIKRELRGLNRAQHDLSQHQPVQQQADAARTQAAASHDRHLATKPGVL EAIFSFGRAVRAWRTRLTDLARALDSAEHHYREVCDRGQRLHDSVRQAQARLLSAQHDLN GLRDQRARLQDQCAQDKERFGAAYPGPAWLGDQRELHAPWLDKELDTARSDLFVAALHLH QDFLANTARDMLYGLRAAGEVVAGNYPRDLEPEKIRAAWQLFFLVVPLISTTFASASRMF SGIGSEAIGWLLIDEAGQASPQCAVGAIWRAQRILAVGDPLQLEPVVTLPEKAQRNIASN YDLGTTWIPPRASVQTLADRVTPFGTQLDQGEDKVWVSAPLLVHRRCDNPMFTLCNQIAY NNLMVNGVHRDLKDPDERFDSPTGPLIAPSFWADEPANSPGSHLQPNQIERFEKALAYLN DHDVPPSEVIAISPFRAVADRLRSLIPKYQGLQAGTIHTAQGREADVVILVLGGDPNKPG APANWARTPNLVNVAASRAKRRLYVIGDRSFWARHNYFRDLSNALVQ >gi|294970528|gb|ADNU01000075.1| GENE 21 21119 - 24034 1194 971 aa, chain - ## HITS:1 COG:CAC2824_2 KEGG:ns NR:ns ## COG: CAC2824_2 COG1061 # Protein_GI_number: 15896079 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Clostridium acetobutylicum # 24 376 7 356 616 83 24.0 2e-15 MRDSFDGAIGFTSHSRAHSLRRPQIGALHSIVGYQSSGLTEPGVVVMPTGTGKTETMLAW MIAQRPERVLVLVPSSALREQIASKFETLGILQREGIVEPDAMRPRVGRVAGRFDSEEDA AAFVAACNVVVATPNAIHASEAAVQRAFFSGFTHLLVDEAHHAPARTWAEIIRAFGERPI LLFTATPYRRDGLTLPGRVIFRFPLREAQREGYFSTIDFTAVLDLDDDDEALARAALSRL RSDLDAGHEHLLLARVGTKPRADEIHALYSRLAPEFAPKVIHDSLRASERDAAIRAMRER SSRVIVCVDMLGEGFDLPTLKVGAFHDTHRSLSPMVQLIGRLARTSSPVPIGTASVFIRQ GPKQALSPLRFLLREDPDWDKVLSDITERATERADEISEFESSFADNPPDVPVGLLEPKM SARAFATTTVDWDPLAARAVYGDRILDGLISVNRDDTIAWFVIETVSDLRWGDIPSLRAT DYTLVVLFLDRTQGLLYVHCSDTKRSLDDLVEAVIGHEPAPVNGYDTFKVFAKLDRLIPT NIGLLDARDRDKRFSMHVGSDVETALTEAERTHKANTHVAAKAFQEGERVTIAAALSGRF WSMRTASNLAEWRRWCRDQGAKLRDKSVDVRSLFRDMIIPVDVKERPPYPFLAVEWPWEL YVGAGTSSRVVFNANGVPLTDAGLRIDDYGVDGPLRFSVVTPTWELPYEGRFGSTGVHYR ALGDDATVEGGRGSTAPLSTWLNNHKPTLLLAGDRLITGDDRLLAPRTELPPYPRDNLRS LDWGAGGVNIAVESQGPDRRADSIQAFMARYLGDNQTFDVLIDDDRSGEAADLVGIRVDG GDLHVTLVHCKYSSKPDAGSRLKDLYEVCGQAMRGARWRDNAALPLLEHLDRRAVGYTRR FGGTAFEIGDREMLFRIRQQASLLFPRFTTIIAQPGLSIGSASDEQLRLIAGAASYVQTV TKGGFEVYGSD >gi|294970528|gb|ADNU01000075.1| GENE 22 24613 - 24777 71 54 aa, chain - ## HITS:1 COG:no KEGG:pnf2690 NR:ns ## KEGG: pnf2690 # Name: not_defined # Def: hypothetical protein # Organism: N.farcinica # Pathway: not_defined # 1 54 137 190 190 67 61.0 1e-10 MVKSEPDQGIVRRGVTLIKGLLAPISAGLGKAATEETADAARQVIDALGASLPF >gi|294970528|gb|ADNU01000075.1| GENE 23 24814 - 25101 311 95 aa, chain - ## HITS:1 COG:no KEGG:pnf2690 NR:ns ## KEGG: pnf2690 # Name: not_defined # Def: hypothetical protein # Organism: N.farcinica # Pathway: not_defined # 1 71 30 99 190 91 61.0 9e-18 MSREIKREFAKNPVRVPLEADDSTLSLPAATTVSNYHGPVVTVNGDHAQLAWDNQSVTQV QTHIEQVAPGYEQLAQLLTDILANLSTFQLDETDG Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:15:05 2011 Seq name: gi|294970527|gb|ADNU01000076.1| Brevibacterium mcbrellneri ATCC 49030 contig00111, whole genome shotgun sequence Length of sequence - 1672 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 59 - 1504 99.0 # AY959208 [D:1..1447] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:15:13 2011 Seq name: gi|294970507|gb|ADNU01000077.1| Brevibacterium mcbrellneri ATCC 49030 contig00112, whole genome shotgun sequence Length of sequence - 23179 bp Number of predicted genes - 20, with homology - 20 Number of transcription units - 10, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 5 - 92 49.3 # Ser TGA 0 0 + Prom 102 - 161 2.3 1 1 Tu 1 . + CDS 355 - 3030 1834 ## COG3280 Maltooligosyl trehalose synthase + Term 3182 - 3216 1.3 2 2 Op 1 . - CDS 3096 - 5369 1377 ## COG3281 Uncharacterized protein, probably involved in trehalose biosynthesis - Term 5385 - 5415 0.7 3 2 Op 2 . - CDS 5439 - 6740 1146 ## COG1171 Threonine dehydratase 4 3 Op 1 . + CDS 6796 - 7812 818 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 5 3 Op 2 . + CDS 7809 - 8492 717 ## nfa2200 hypothetical protein 6 3 Op 3 . + CDS 8496 - 9077 322 ## gi|295396629|ref|ZP_06806783.1| conserved hypothetical protein + Term 9106 - 9151 1.1 - Term 8935 - 8973 -1.0 7 4 Op 1 . - CDS 9032 - 9865 873 ## COG0561 Predicted hydrolases of the HAD superfamily 8 4 Op 2 . - CDS 9890 - 11176 1285 ## COG0172 Seryl-tRNA synthetase - Prom 11211 - 11270 1.9 9 5 Tu 1 . + CDS 11268 - 12392 712 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 10 6 Op 1 18/0.000 + CDS 12521 - 12982 267 ## COG1846 Transcriptional regulators 11 6 Op 2 21/0.000 + CDS 13019 - 13891 131 ## COG0477 Permeases of the major facilitator superfamily 12 6 Op 3 . + CDS 13776 - 14162 342 ## COG0477 Permeases of the major facilitator superfamily + Prom 14178 - 14237 2.0 13 7 Tu 1 . + CDS 14291 - 15640 1640 ## gi|295396635|ref|ZP_06806789.1| possible outer membrane protein + Term 15683 - 15724 6.7 14 8 Op 1 . + CDS 15853 - 17454 1819 ## COG0471 Di- and tricarboxylate transporters 15 8 Op 2 . + CDS 17484 - 18233 777 ## Asphe3_39820 hypothetical protein + Term 18434 - 18475 -1.0 - Term 18165 - 18220 5.5 16 9 Op 1 4/0.000 - CDS 18246 - 18698 355 ## COG0789 Predicted transcriptional regulators 17 9 Op 2 5/0.000 - CDS 18705 - 19724 1150 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 18 9 Op 3 29/0.000 - CDS 19793 - 20503 779 ## COG0576 Molecular chaperone GrpE (heat shock protein) 19 9 Op 4 . - CDS 20503 - 22362 2548 ## COG0443 Molecular chaperone + Prom 22315 - 22374 2.0 20 10 Tu 1 . + CDS 22561 - 23127 288 ## Gobs_1817 integral membrane protein Predicted protein(s) >gi|294970507|gb|ADNU01000077.1| GENE 1 355 - 3030 1834 891 aa, chain + ## HITS:1 COG:MT1614 KEGG:ns NR:ns ## COG: MT1614 COG3280 # Protein_GI_number: 15841030 # Func_class: G Carbohydrate transport and metabolism # Function: Maltooligosyl trehalose synthase # Organism: Mycobacterium tuberculosis CDC1551 # 28 336 23 317 765 149 32.0 2e-35 MSGQPQKTGHDRWWPSSIYRVPVDRNVTLFDATKVIPHIAELGFTAIRISPITAASTANG TGAAADPNTVDPHLGGLEGLEALSTAAHNAHLGVIVDFVPGALHIAHPSLNPYWWDVLLH GQDSQYAYWFDIQWTHDKVSVVVDQPASTATLTTHPATQQPVLQIGSSVYPVNPETLRSQ HPKNSHDPQELLATQNYTCVERTNPAHPLNYRRVNADSNVATIRVNDPHVFTETHRELSR WFHTGLIDGVSVRHIDSIANPQGYLEQLHDLTGGYIITEKRFALNSEGQREVTPSSWPGS ASATYPLITAIDGALTHPIGFYELESFRQHLAAGLDPHDRSEISPIAKQLRFNPTSVTGL LTLEEVQCKEEVTNTLMRSEMVDLAVTAKNAWDGLDESTRARIRTDPTAQVDVDTLAQIL GILVASVSVARPELGLDKEAEVVREGFLSALSESEPDDFLGHNSTGEVPVMTAGSMVVPR ALAKVRSTVASGTASDRLLAYVGLLLTTPGCPVSTRFSQTTSDVFNLGVTARAHYRYCTL AALNEVGGLPSEPGHPDRIIDEFHLQTSTTSAPVINGLTSPVTKYSRTERCRILALSEIP QKFMEFVADMRDLAPLDYASTQAPTSGAPASAPPDTSFDILLWQSIVGAWNPQVNVEELV NRAVRAARRRYESDDSFVESVRNAVHKALTVPEVATTVDHMAATVRHAGHRNSQAARALQ LFSPGIPEVFDPLFVNPHERLVNNNPNDQLLRKGLAVRARHPHIFAQPSSLTPPSRVAVT GERAEHAFGLAHFGDGLFPDVVVVVERLSITLRATGGWGDTRFHIPTSVADDQDLAESAP TLQTMALPVIRENVEPTWRDALSGRTWTGVDFSVAEVFGTNPVALLERVRS >gi|294970507|gb|ADNU01000077.1| GENE 2 3096 - 5369 1377 757 aa, chain - ## HITS:1 COG:Rv0127 KEGG:ns NR:ns ## COG: Rv0127 COG3281 # Protein_GI_number: 15607269 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein, probably involved in trehalose biosynthesis # Organism: Mycobacterium tuberculosis H37Rv # 221 559 135 455 455 71 26.0 7e-12 MAMSSELEGLLAQWLPRQSWFPVTSFELAGTPDVVPMSDTQVFELDFPLPGDETLTVQGW IAVVGIGSGDNTRRISVPLTLRTREDEPLRPHLIGQIDDFMLGPCYVYDAVADPVFVLFA ATAMATGDASFALGRDAAFDDFGTPSEAGSKRKDPMAEAAVGMRSDAAVSTEPVSVSEAF DSQFENSDHSQLTALRVGHSGRDFNDLTNMSVLWHRATTTQLKFDNSRKGETAVLIDDHA FPSVLTFFRTLDISDVPESVRLPIMLTIAESQAVAPVLGWMASRWFDGADLHTHTAPVAM LTRSEASATSAWSEAVAAARNAAEATGYARQAHDLGGRVASLHVDLGRELGKAEGTGAPT AEWVKKWSDRVDWALARATLALKPLEKQLRAHKRALVDLRSVGNLQRIHGELTLNHVVKA PVHGYTVTNFSETSELRPPTFDLVALLRSLDYAAGYALLARTGALDPKATPSTLGATGLV DDDLIARMDGAPETRWSHESQKALLAGYSHVGGADFSFKDPVLRAMLIDRLLVEVVSELR NRPTWLIVPLSELRRLLTTDTEVTAEPARLNPRTSTEATRAAIEERLAEHRKAQEEKVAH ARAAAAKARQENDRLVEASQVAKKAGHRIFAPASRNVEAEVQDAEVAKATADEPVDEARS PQGEDQTEDRAEPTQENTKEPNRASGSHAVTPRPSSETPTSGAANTADDAANPATVEPAE EEVDDLTDDPVDDTDEDGDTDGEVEPPFAPKSARTVR >gi|294970507|gb|ADNU01000077.1| GENE 3 5439 - 6740 1146 433 aa, chain - ## HITS:1 COG:MT1610 KEGG:ns NR:ns ## COG: MT1610 COG1171 # Protein_GI_number: 15841026 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Mycobacterium tuberculosis CDC1551 # 20 433 20 429 429 434 61.0 1e-121 MHNGGVLIEGQKTTTPPTVSDIEDAAKRIADCVITSPLHISERLSELTGATVYLKREDLQ PVRSYKIRGAFNFLLQLDAKEREHGVVCASAGNHAQGFARACNTLGVQGRIFVPKTTPRQ KIDRIRHFGGDRITITVAGSTYDDASELAKKHAATSGALVVSAFDDPRTIAGQGTISAEI TDQLGFDPDTIVVPVGGGGLLAGMAEYCHHRTPNTRVVGVEPAGAACMTAALAAGAPVQL DTVDSFADGAAVRRAGDLTYAMVRDLGLPITTVDEGRVAKEMVDLYQVDGIIAEPAGAIA PASVGPADSNAPVTIEAGSTVVCVISGGNNDLSRYSEVLERALVWEGLQHYFIVNFPQEP GALRRFLDNVLGPDDDISMFEYVKRSDREIGPAFVGITLGCAQDLPGLLERMDASPLEIE CVSQDSPLFRMFV >gi|294970507|gb|ADNU01000077.1| GENE 4 6796 - 7812 818 338 aa, chain + ## HITS:1 COG:AGc1508 KEGG:ns NR:ns ## COG: AGc1508 COG0604 # Protein_GI_number: 15888165 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 337 22 348 348 305 49.0 1e-82 MRSITAPQPGGPDALKLSDSPVPSAQPGEVVVKVEAAGVNRADVLQRMGFYTPPKGATDI LGLEAAGTVHQVGDGVDDWQVGDRVAVLLTGGGYAEYVPVPAGQVLPVPEGMSFVEAAAL PEVVATVYSNVVMEAGLSEGEWLLVHGGASGIGTMAIQIAKQMGARVAVTVGSDDRARKC ADLGADAVINYRDEDFVERIREITGSGEGADGSAGARVPGADVILDIIGAKYLERNIQAL SADGRLIIIGMQGGTKAQINLGDLLPLRRSVMGTTLRARPAEQKAHIVAEVRKHVWPAVA SGKIRPIVDRVFALDDCVQAHEHMDQPHFGKIVLEVNP >gi|294970507|gb|ADNU01000077.1| GENE 5 7809 - 8492 717 227 aa, chain + ## HITS:1 COG:no KEGG:nfa2200 NR:ns ## KEGG: nfa2200 # Name: not_defined # Def: hypothetical protein # Organism: N.farcinica # Pathway: not_defined # 46 199 21 163 204 83 34.0 8e-15 MSEHPDQQDQQDIELPDIPEDEENTILPDLTTAEAGEQPGTPRDEEGEAAAEPAEAENED TADSDSVDGEPSDTKDIDEEDADGADKKDAEGKTDEPDITNPGKLVRLGHMHAKILEELK SAETDPAGRKRLAQIHENTIEAMKEALGQDLEDEFLSFTPKLSSYSTPSHSELLLAQAGL VGWIEGLLQSIQTAIMARQAMHEESPAHPEHPVKHNPEGAYGPGNYL >gi|294970507|gb|ADNU01000077.1| GENE 6 8496 - 9077 322 193 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396629|ref|ZP_06806783.1| ## NR: gi|295396629|ref|ZP_06806783.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 193 1 193 193 306 100.0 6e-82 MGLAKFFQGLRKKEPQPDDLYGTGVWRQHRDRFNRAVDRFFVTASRLHEETQAGTTQDAH AQAAEQIAALTHTLNQVAQQVDHCARTLHTHVPVNEQTIPAQVRTQVDTLPELMSRAATK VAEAAQAAAMVRAQVRTTSGGVTENSETDETSPAGPAEVAGVSAAQRYVDDAARLVDECH RIAERIASSDSSK >gi|294970507|gb|ADNU01000077.1| GENE 7 9032 - 9865 873 277 aa, chain - ## HITS:1 COG:SPy1700 KEGG:ns NR:ns ## COG: SPy1700 COG0561 # Protein_GI_number: 15675557 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 4 264 3 267 274 92 28.0 6e-19 MTPHLIALDIDGTIVDYDDKLSDRVRGAIRACREQGHHIVIATGRSLSGALDVANRLGLT EGFVVVSNGAVIAALNPNTATGYELVHVETFNPGPALTRMNHALPTALCLVEDENLERWA SADFPVGDLAAGDDLNIVRFAELKTLRATRIVLRELHGSREEFADAVEKIGLHGVTYSVG WSNWLDIAPEGVSKASGLARVANDLGVDQQHTVGAGDGTNDHEMMEWVTHGIVMGQAGQR LKDLGTVITGTVQEDGLATALQDYFELSEDAIRSAMR >gi|294970507|gb|ADNU01000077.1| GENE 8 9890 - 11176 1285 428 aa, chain - ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 416 11 421 432 464 57.0 1e-130 MIDLVQLRENPEIFKASQRARGASVELVDQIVAADSARRSAIAEFEEIRAQQKAFGKKVA SEKDKDAKAKLVAEAKEMSDRVKALQADNDEAQQNFERILMKLPNLIIDGVPSGGEEDSV ELRREGTVRDFSTDGFEPVDHLEIGERLNAIDTTRGAKVSGSRFHFLTGFGARLEMALLN LAMDTAISAGFTPMVVPTLVKPEVMGGTGFLGEHADEVYRLEADDLFLVGTSEVPLAGYF MDEIIDLSDGPIRFGGISSCYRREAGSYGKDTRGIIRVHQFQKVEMFSYVHQDDAEDEHL RMLSLQEQMLQACELPYRVIDIAAGDLGDSAARKYDCEAWVPTQNTYRELTSTSNCTSFQ ARRLKIRERTSDGQTVPVATLNGTMANTRWLVPILENHQQADGSVAIPAALQPYLGGMKA YGPDGEVF >gi|294970507|gb|ADNU01000077.1| GENE 9 11268 - 12392 712 374 aa, chain + ## HITS:1 COG:all1876 KEGG:ns NR:ns ## COG: all1876 COG1597 # Protein_GI_number: 17229368 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Nostoc sp. PCC 7120 # 60 368 3 310 323 114 29.0 3e-25 MNLTGWIVLAVAVVVALVLGYLVGAARTRSTLNQLQGPEQAALETTSAAGSSETTAQPQR RAAIIYNPTKSEMDTLKSVAATVFRNEGWDEPLFIETTKDDPGTSMAHEAREKGAEVVIA AGGDGTVRAVAQALAGTDVPMGIIPMGTGNLLARNLAVPLNRFEWAIRVALWGQDRVIDA AHLRTSPDGEDTLFTVMAGIGYDATVMSNTTENAKARIGWLAYVRQGWRQLLGKPTEVRI QFDDGQEETRKIRSILGGNCGKVQGGIELIPGAVIDDGYLDVLTVTPRNVAEWASVVTSI AGRSRKGMHADVTKCRSVTVRAEKKLDVQVDGDVLGETDFLELSVQPNALTVRTPSPEQE RRIRLDALSLGIGR >gi|294970507|gb|ADNU01000077.1| GENE 10 12521 - 12982 267 153 aa, chain + ## HITS:1 COG:MT2389 KEGG:ns NR:ns ## COG: MT2389 COG1846 # Protein_GI_number: 15841830 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 12 149 14 151 163 60 34.0 9e-10 MHIVGPPFKHDGKTLDSLAYELVANSSSFRRAYARGLDGRRSLIAIRVLANLQSGGPLRI GELATREAVTQPTMTGIVNRLVADNLVERRADAHDARASAVTLTDTGRQELEQARTAAAQ SVRPALETLSPDDLEILQRAANLLGRLGDTLTE >gi|294970507|gb|ADNU01000077.1| GENE 11 13019 - 13891 131 290 aa, chain + ## HITS:1 COG:BS_yfmO KEGG:ns NR:ns ## COG: BS_yfmO COG0477 # Protein_GI_number: 16077807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 27 221 10 204 396 222 60.0 6e-58 MFPTPPNSNKPNSTELSDTEAQKKGNRPSIFHQPSAVWAISFACMVSFMGIGLVDPILPA ISRELNSTPSQTMLLFTSYLLVTSAAMFFAGFISSRLGVKRTLTVGLALIVLSATLAGTA GSVDAIIGFRAGWGLGNALFISTALAAIVGAASGGSGQAIILYEAALGVDLAVGPLVGGA LGSISWRMPFFGTAALMTIGLAAIIALLPKPTNTATKASLWVGSCTCFHLGARGAALDPQ VRAPPGTFDQLCHVCRVPHHYGNWSPQLADTCWHSRRGRIVSRRSQHCTH >gi|294970507|gb|ADNU01000077.1| GENE 12 13776 - 14162 342 128 aa, chain + ## HITS:1 COG:BS_yfmO KEGG:ns NR:ns ## COG: BS_yfmO COG0477 # Protein_GI_number: 16077807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 2 112 286 396 396 74 43.0 4e-14 MFAACLITMAIGAHSLPTLVGTVVVAGLFLGVLNTALTEAVMEATDLPRSITSSAYSGIR FLGGAVAPLVTGPLAEIAGAGAPYCLATAAVLGSMVILVSGRGLLADIDRPHVTSQEEAS AITAGDEV >gi|294970507|gb|ADNU01000077.1| GENE 13 14291 - 15640 1640 449 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396635|ref|ZP_06806789.1| ## NR: gi|295396635|ref|ZP_06806789.1| possible outer membrane protein [Brevibacterium mcbrellneri ATCC 49030] possible outer membrane protein [Brevibacterium mcbrellneri ATCC 49030] # 1 449 1 449 449 751 100.0 0 MKKLVLAPAVALVAGAIAFSGTPAFAAPTAECSNNTLNAKQGAQCTITLDADKVQAQKVS ISVSNLPAGAKIKTVDAPNSADPSLKLVTRVDELAETPTFEVYGVDGITGGGDGVKNPNG DYTVTVTLEDGTKVNAGVIRYIDKDKEAAGDPELSAQFDKYHVGAFRAAGMVVSYKNLES SKEFTWVLKHEESGKTSTGTFNSNSVSKNGGTFYAKVEGADKMSDSELKGKYTLTLKDES GKTLDASISFAVVDDREDVGTPQPNNPKPGEGDKPKEEAAKYGLKVSPKELKPADFVNKD KGVQLVVTGLKPNEKFTYSVSKQGGSGKVEDLFKEVQANKDGVWSHTVYGIDGGNGLKGF LGTYKVTVKSEEGELTDTFKVTNTPGKKDEAKPGDKGDGKDKGGDKNEGNDKSSNTLPRT GTELSGLIAGGALLTVGAATVLITRRRAK >gi|294970507|gb|ADNU01000077.1| GENE 14 15853 - 17454 1819 533 aa, chain + ## HITS:1 COG:SA0645 KEGG:ns NR:ns ## COG: SA0645 COG0471 # Protein_GI_number: 15926367 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Staphylococcus aureus N315 # 53 533 24 517 517 500 60.0 1e-141 MAEPAKSSLRKKAEQRSQASAEVKREKEAVARASAEESNKHPDGFLAHLNLKPIWFAAAF IALFGILLLPTGEGLTLAGKQALAILAFAIIMWVTEAVSYTVSSILIVGIITIALSFAPP LTGETSEAMGTTESIKLALSGFASSAVALVAAALALAAAMQATGLHKRLALIVLKFAGEK TSNVVIGAIAISTILAFFVPSATARAGAVVPILLGMVAAFGLATNSRLGALLIITAAQAV SVWNVGIKTAAAQNIVATNFIESSMQQQVSWGQWFMWAAPWSVMMSVALFFIMRWAIKPE VDHIEGGRAVIERDLKELGPITGKEIRLIIVAVALLFLWATEKSLHPFDSATVTIVAIGF LLLPKVGVFSWKTAEKLINWGTLIVFAVGISLGSLLLKTGAAEWLSEKTFGALGITNMPM LAMIAIVGLFTILIHLGFASATSLSSALIPVFIALAQSVPGAANGGIGFVIIQQFLICFG FLLPISAPQNMLAYGTGAFTAKQFLKTGIPITIVGYLLVLLLSATYWKWIGLV >gi|294970507|gb|ADNU01000077.1| GENE 15 17484 - 18233 777 249 aa, chain + ## HITS:1 COG:no KEGG:Asphe3_39820 NR:ns ## KEGG: Asphe3_39820 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 15 249 25 249 249 135 36.0 1e-30 MPLQKDLDFRTLAEAFYLQTLDQLSRANLDEPSLLPDWSRKHVAVHMMHNAEGFMRLLHW ARTGEETHMYPSREARDKAIEDDVALLENGDVITMSHEVAEELANDLGTIPADRWETQVI SGRGATIPASDIPWLRARECFIHALDLNIGMTALDFPAEVTDRLLTDVTSIWEQRGEPVN YLLHFTDTGEDLHICTSDTADQVQVTGHKAEVLQHLLGRGWPVSGRDDNTKGGAGDSTPR DLPAPPQWL >gi|294970507|gb|ADNU01000077.1| GENE 16 18246 - 18698 355 150 aa, chain - ## HITS:1 COG:MT0368 KEGG:ns NR:ns ## COG: MT0368 COG0789 # Protein_GI_number: 15839739 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 9 99 13 103 126 97 60.0 1e-20 MISSSAAVYVISVAADLAGMHPQTLRQYDRLGLVTPERTAGRGRRYSADDVAKLRLIQSL SQEEGINLAGIKRILELKEEVDEARRQLRAMEEKMEATRQRVAAVDRVFAAGSAGDVVSI LKGERPRTRIAGALLPPARTGRPTLVHRRY >gi|294970507|gb|ADNU01000077.1| GENE 17 18705 - 19724 1150 339 aa, chain - ## HITS:1 COG:Cgl2738 KEGG:ns NR:ns ## COG: Cgl2738 COG0484 # Protein_GI_number: 19553988 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Corynebacterium glutamicum # 7 335 4 393 395 205 39.0 1e-52 MNSGPQNEWFEKDYYATLGVSKDASASDIKKAYRKLARKYHPDANPGDKVAEEKFKDVSA ANQVLSDPETRKQYDQVRAMGSGARFSAGSGGSGQGFEDIFSGLFNTGGGYTTRGTGGPG GPDLGDIFGNFGGYSPGGFSGGGYSPGGFSGGGFGPQKGGDFKASTRLSFKEAAEGATVK LTMPGGKPLTVRTPVGVSDGQKVRLAGKGKPGSNGGPNGDVILTVHVDKHPVFTRDGNNL RMNLPVTFAEAALGATVDVPTLGGGYVRMRVPAGTPSGRVLRVRGKGINGKQTGDLLVTI EIAVPRNLNADAKAAVEAFAKATEGEDPREGLAAKASRS >gi|294970507|gb|ADNU01000077.1| GENE 18 19793 - 20503 779 236 aa, chain - ## HITS:1 COG:ML2495 KEGG:ns NR:ns ## COG: ML2495 COG0576 # Protein_GI_number: 15828349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Mycobacterium leprae # 9 231 2 188 229 90 32.0 2e-18 MSTEKPFDSAGEPAEQGFSFTDKRRVDPETGEVRAPKDAQQPAAGEQDAGETAAAEAGAE PTEAGQSATGEPAADASDLGVEIPEDASALGDSEAGEVSADAAQHLEDLQRLNAEYAAYR RRSERERERAHENGMVKVTEALMPILDEVRLAREAGDVEGPFAKHVDRLFEALNKLGIEQ YGEVGEVFDPNVHEALMQQPSEEVEEPTVFLVMQPGYRMGERILKAARVGVHVPAE >gi|294970507|gb|ADNU01000077.1| GENE 19 20503 - 22362 2548 619 aa, chain - ## HITS:1 COG:Rv0350 KEGG:ns NR:ns ## COG: Rv0350 COG0443 # Protein_GI_number: 15607491 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Mycobacterium tuberculosis H37Rv # 1 602 1 604 625 724 67.0 0 MARAVGIDLGTTNSVVAVLEGGEPKVIANAEGGRTTPSVVAVNKNGDSLVGEIAKRQAVM NVKNTVASVKRHMGTDWTTELDGKKLTAPEISARILQKLKHDAEEYLQEEVTDAVITVPA YFNDSQRQATKDAGQIAGLNVLRIINEPTAAALAYGLERGKEDELILVFDLGGGTFDVSL LEVGKDDDDFSTIQVRATSGDNKLGGDDWDQAIVDWLVEKVKNGYGVDPTKDSSAMQRLK EAAEQAKKELSSATSTNISLQYLSMSENGPIHLDESLSRAKFEELTHDLLERTKTPFQAV IRDAGVDVKDIDHVVLVGGSTRMPAVAEVVKELTGGREPNKGVNPDEVVAIGAAVQAGVL KGERKDVLLIDVTPLSLGLETKGGVMTKLIERNTPIPTKKSETFTTAEDNQPSVSIQVFQ GEREFTRDNKPLGTFELTGIAPAPRGMPQIEVSFDIDANGIVHVSAKDKGTGKEQSMTIT GGSAIPEEDIERMVREAEEHAEEDKKRREAADKRNVAENMAYQTDKLIKDNDDKLPEDVK KEVQADVDELKEALKGDDDAAVEKALEKLQTSQTKLGEALYAQQSADGAAGADAAAGSAD SADDDVVDAEVIDEDEENK >gi|294970507|gb|ADNU01000077.1| GENE 20 22561 - 23127 288 188 aa, chain + ## HITS:1 COG:no KEGG:Gobs_1817 NR:ns ## KEGG: Gobs_1817 # Name: not_defined # Def: integral membrane protein # Organism: G.obscurus # Pathway: not_defined # 6 166 13 174 189 89 39.0 5e-17 MKPTTAISLGLFAAWAVHDAEELVTMAPTSRRVFRQLPDFLPIPQSLRERGLSQKHVNVS LGLMAVPVALSAVAGVKTNGKSPWFRGGLLAFGVHGFTHLLSSVATRSYTTGVATAPVVV LPYWFIARRVLQQHGVEGSTRGVIATALAAIPLTAGVHVISAALLREDSLGPARELDNRF APRRPKQC Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:15:59 2011 Seq name: gi|294970504|gb|ADNU01000078.1| Brevibacterium mcbrellneri ATCC 49030 contig00114, whole genome shotgun sequence Length of sequence - 2581 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 213 - 965 205 ## gi|295396644|ref|ZP_06806797.1| hypothetical protein HMPREF0183_2295 2 1 Op 2 . - CDS 962 - 1984 448 ## Francci3_2899 hypothetical protein - Prom 2156 - 2215 2.5 Predicted protein(s) >gi|294970504|gb|ADNU01000078.1| GENE 1 213 - 965 205 250 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396644|ref|ZP_06806797.1| ## NR: gi|295396644|ref|ZP_06806797.1| hypothetical protein HMPREF0183_2295 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2295 [Brevibacterium mcbrellneri ATCC 49030] # 1 250 4 253 253 482 100.0 1e-134 MNDLDPLIVSLTGSVTLSAPIVSAIESGELEPEGAFARFSGTCHALAPQWFDSNQLQAHE AFWCFDDGAQIDQTISGELAWFQTGVYTSSVALQSVPLLVHAAGEAVQQLGTSSFDSIRV QVPHARCGFGEKAIQQLVDQFSALANVRSAVEVHAQLMCRRHHKRWTSEATAWFDNTYLV PLALQNLEMAQDRVNPDNRWALRQAQSLCTAVFSAPEWSLSLASTIAVLMVEATRATCTN GTLIVEVKRG >gi|294970504|gb|ADNU01000078.1| GENE 2 962 - 1984 448 340 aa, chain - ## HITS:1 COG:no KEGG:Francci3_2899 NR:ns ## KEGG: Francci3_2899 # Name: not_defined # Def: hypothetical protein # Organism: Frankia_CcI3 # Pathway: not_defined # 223 338 66 184 186 87 42.0 7e-16 MTRPQISRFTSITSCLLIFSLLGPTVVHASPAFSASSTSEAKHVEKTVVAASTSNEPLAR STTQSLRSVYRHHDGISTLVTYDPGNYATIDIDSAVSVGFSLTDISAVEQGTVTPNGTTV FPVKGSGDAYAFQIHESGSISASAITMSSQSSQTFSYSLSDGITPVVQNTGAVALYEGET LVGLFEHPKARDASGREVPSSYSVVDGNLVQSAHASPHTSYPLVTTAKIGIFQTQGDYVH VTRGQASGHGWWLKGTTNATKAKVTVQLQYKPKKGSRWHNRGKAGVRVLGPGSSKRANAR MTCRSSGRKQWRSWVDVDLIGYLDTPNKYYSPARTLKCTI Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:16:16 2011 Seq name: gi|294970503|gb|ADNU01000079.1| Brevibacterium mcbrellneri ATCC 49030 contig00116, whole genome shotgun sequence Length of sequence - 1642 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 21 - 212 141 ## gi|302535128|ref|ZP_07287470.1| conserved hypothetical protein - LSU_RRNA 302 - 1104 91.0 # CP000750 [D:2413250..2416396] # 23S ribosomal RNA # Kineococcus radiotolerans SRS30216 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Kineosporiineae; Kineosporiaceae; Kineococcus. 2 2 Tu 1 . + CDS 1336 - 1512 112 ## Predicted protein(s) >gi|294970503|gb|ADNU01000079.1| GENE 1 21 - 212 141 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302535128|ref|ZP_07287470.1| ## NR: gi|302535128|ref|ZP_07287470.1| conserved hypothetical protein [Streptomyces sp. C] conserved hypothetical protein [Streptomyces sp. C] conserved hypothetical protein [Streptomyces sp. C] conserved hypothetical protein [Streptomyces sp. C] # 5 62 39 96 179 68 72.0 2e-10 MIRYGRFFTGTGISTRYPSTTPVGLALGPDLPRADEPAPGTLCHPADGILTRLSLLMPAF SLA >gi|294970503|gb|ADNU01000079.1| GENE 2 1336 - 1512 112 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGTEMFHFPTFPPTTYTFNGRSPHITCSGVTPFGHPRITVRSPTPRGLSQVTTSFIGS Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:16:27 2011 Seq name: gi|294970501|gb|ADNU01000080.1| Brevibacterium mcbrellneri ATCC 49030 contig00117, whole genome shotgun sequence Length of sequence - 541 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 453 283 ## gi|295396648|ref|ZP_06806799.1| conserved hypothetical protein Predicted protein(s) >gi|294970501|gb|ADNU01000080.1| GENE 1 3 - 453 283 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396648|ref|ZP_06806799.1| ## NR: gi|295396648|ref|ZP_06806799.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 150 30 179 180 295 100.0 6e-79 MTAVVLMPKLWALAKAGVVGFDRVLYTAGRVGRAGVCIPVFDDMLTNKRVDVPWKTYRRH VGEILAMLMTPETRVENAKRNRGVSYWVNDDGTATLSLTGPVLEMEAFYQRVRGTARAIL ANHIEAFSATLTDEQQALFITENNGETTEV Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:16:37 2011 Seq name: gi|294970499|gb|ADNU01000081.1| Brevibacterium mcbrellneri ATCC 49030 contig00120, whole genome shotgun sequence Length of sequence - 1302 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 81 - 1283 630 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|294970499|gb|ADNU01000081.1| GENE 1 81 - 1283 630 400 aa, chain - ## HITS:1 COG:SMc00343 KEGG:ns NR:ns ## COG: SMc00343 COG2801 # Protein_GI_number: 15964016 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 11 326 16 326 390 126 31.0 9e-29 MSYNNPNLAIVKAVTEQHMSISQAARHFNRSRQWIYTLLKRYHAGGPEAVLPQSTAPRST PNKTTDTTIKNIIAIRRELTAKGADNGPETIAWILTQRGLHAPAESTIRRILTQQGMVTP QPAKRPKASLRRFEATLPNECWQADVTHTRLRNGKAIDVLDFIDDHSRYLLYLVAHPRVY GPTVATAIHTITDTYGLPQSTLTDNGLIFTARLAGAKGGKTAFEKFLEHHSIKQKNGRVA HPQTQGKIERFHQTLKKWIRAQTPAETIPELQQQLDTFRHWYNTERPHRALGRRTPQQAY EALPKASPQPLVTEDNRVRNDKVDKAGRITLRFAGQMRYLGIGRAHTGTRTLTIITGTHA LTTNTETGEIIAEHNIDTGRRYQPNLIKNTRPTQTQTPQS Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:16:37 2011 Seq name: gi|294970496|gb|ADNU01000082.1| Brevibacterium mcbrellneri ATCC 49030 contig00121, whole genome shotgun sequence Length of sequence - 1433 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 30 - 893 582 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 890 - 1372 285 ## jk1804 transposase for IS3515 Predicted protein(s) >gi|294970496|gb|ADNU01000082.1| GENE 1 30 - 893 582 287 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 9 281 7 278 283 251 46.0 9e-67 MKVQAIVILKSHHRLEYLLEAAGIPRSTFFYHQKRLSQPDKHAALKQAIRESFERNKHRY GYRRVLLELRNQGWVINHKLVYKLMCEMGLRAKIRQRRPYVSYAGTISHIAENVLDRKFT PDKPNTVFVSDVTEFRVAGRKVYLSPVMDLFDRSIVAHTVATSPSTAFTADSLTKAIAVS TPEPGWMIHTDQGFQYQHSSWRNLIHNNGGVQSMSRKANCYDNAVMENFFGHVKTEMYHG EVFDTVAEFTQAIDEYIGWYNTERIQQRLKGLTPMQYRNQTLEASAA >gi|294970496|gb|ADNU01000082.1| GENE 2 890 - 1372 285 160 aa, chain - ## HITS:1 COG:no KEGG:jk1804 NR:ns ## KEGG: jk1804 # Name: tnp3515a1 # Def: transposase for IS3515 # Organism: C.jeikeium # Pathway: not_defined # 1 160 1 160 160 223 83.0 1e-57 MHSRSSLSESQREWLVECFEQGMGSQAAARVVGVSRDATRALYRRFQLHGRLCLVEKPTK QQYPFETKKEVVERHLAGETKMDLAREFGLSSDRLVEVWSRKWRKDGDEALRPKPKGRPR GSSKPKVLTEEEKLRRQVERLEAENAYLKKLRDLRNQGHA Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:16:42 2011 Seq name: gi|294970489|gb|ADNU01000083.1| Brevibacterium mcbrellneri ATCC 49030 contig00123, whole genome shotgun sequence Length of sequence - 4617 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 214 - 999 717 ## Mlut_00160 hypothetical protein 2 2 Op 1 . + CDS 1064 - 1630 321 ## CMS_pCSL0007 hypothetical protein 3 2 Op 2 . + CDS 1672 - 2049 107 ## SCO4674 hypothetical protein + Term 2177 - 2204 -0.8 4 3 Op 1 . - CDS 2343 - 2681 265 ## Ksed_06750 hypothetical protein 5 3 Op 2 . - CDS 2654 - 2980 258 ## Asphe3_22460 hypothetical protein 6 3 Op 3 . - CDS 3039 - 4388 1209 ## COG3328 Transposase and inactivated derivatives 7 3 Op 4 . - CDS 4394 - 4612 94 ## Predicted protein(s) >gi|294970489|gb|ADNU01000083.1| GENE 1 214 - 999 717 261 aa, chain - ## HITS:1 COG:no KEGG:Mlut_00160 NR:ns ## KEGG: Mlut_00160 # Name: not_defined # Def: hypothetical protein # Organism: M.luteus # Pathway: not_defined # 1 261 1 286 288 218 50.0 2e-55 MATFVDPVADAAEACEGLRGLAHATRAFEDPADTYRVLGEVSGSVRLLRQVLDQLSRAHA DHRDIAFTDDRVPAEAVALAAADELHQATDVLDEVADRVVRAHEASGRIAWHTHTKPEPS RRWVNVVFLQGAEADEVLDLIDVEGVQAGIAHLAQWDFGDETTGAAFVNGEVYDELPAGQ WDRTFEADGYVLTYNPQMGYVGLVREHPDTTPTPGEEEVVAARDAFSGVTSESPRRAADG TDWFAPKVGGGAASSSVGRSL >gi|294970489|gb|ADNU01000083.1| GENE 2 1064 - 1630 321 188 aa, chain + ## HITS:1 COG:no KEGG:CMS_pCSL0007 NR:ns ## KEGG: CMS_pCSL0007 # Name: not_defined # Def: hypothetical protein # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 39 185 4 174 177 72 30.0 6e-12 MAVMEDSRIDGCEVLMELSVPVWMPAFWWRGAAQHVREWVPEDPDQEDHREPRWSDTSEQ RWRLIASTVALVGDELAAGRWTIDEDDDTYYGMVAAPVPEPLTETERHIVTSWFSAGEAV CVDPVASDALEYATPTNTEVLGEAWPELYRAHVDDLAAIEWFDLHDPMNSRFAHAIDQAA RGEHPAPR >gi|294970489|gb|ADNU01000083.1| GENE 3 1672 - 2049 107 125 aa, chain + ## HITS:1 COG:no KEGG:SCO4674 NR:ns ## KEGG: SCO4674 # Name: SCD40A.20 # Def: hypothetical protein # Organism: S.coelicolor # Pathway: not_defined # 6 123 28 144 145 83 42.0 3e-15 MPAIGRFTQLVFECKDPTAEALFWQKVLDLAPATGDDQWLTLDWEPVGRLSFHRVSDYEP PQWPGHRGELQVHLDLLVDDLSEACAAVEAAGGHPLTDVLDPGPKAWRIYADPAGHPFCL VTVPE >gi|294970489|gb|ADNU01000083.1| GENE 4 2343 - 2681 265 112 aa, chain - ## HITS:1 COG:no KEGG:Ksed_06750 NR:ns ## KEGG: Ksed_06750 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 4 112 287 395 487 199 88.0 2e-50 MAFPGQIAVILRSVCDPAIAATLERHGQIGHDLATAGPVAVNETWSRIRTDSAHHAVLWI SEWPRSMVYPGFLSPILLSNGIQRSFSLICTPMRSDQAARDIRKKNVEHISD >gi|294970489|gb|ADNU01000083.1| GENE 5 2654 - 2980 258 108 aa, chain - ## HITS:1 COG:no KEGG:Asphe3_22460 NR:ns ## KEGG: Asphe3_22460 # Name: not_defined # Def: hypothetical protein # Organism: A.phenanthrenivorans # Pathway: not_defined # 1 107 187 292 489 123 71.0 2e-27 MQILERTLPDSGAGLAEWWTTRGQPEDTSWAATTYAELIDRTESAGERHATSLSLSLDMR NAAGQIRTPVGGIRGAAAVLRQEINTLTAEPRSAELTPSSWLSPARLR >gi|294970489|gb|ADNU01000083.1| GENE 6 3039 - 4388 1209 449 aa, chain - ## HITS:1 COG:RSc0252 KEGG:ns NR:ns ## COG: RSc0252 COG3328 # Protein_GI_number: 17544971 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 30 444 19 410 416 388 47.0 1e-107 MTMTDEKTPGGPSGQDLVEQLKAAGQLDALFAQIDEGKVELTGDGGFVPALVKAALERGL QAELTSHLGYEKGSAEAAKHANSRNGTTPKTVESEVGPIALEVPRDRAGSFTPRLVPKGQ RRLGGLDDMIISLYAGGMTIRDIRHHLASTLGTDLSHETISNITDAVLEEVSAWQARPLE EFYPVLYLDAIRIKIRQNNQVINRAAYIAVGVDLDGIKHVLGIWVQDTEGSAFWAHVCAD LANRGVRDVLIVCCDGLKGLPEASEATWPDSMVQTCVVHLIRAATRFVAYQDRKKVAAAL KPIYTAASEDAAWKALVEFETSELGKKYPSAVATWENSWDRFVPFLQFPPMLRKVIYTTN AIESLNYQLRKVTKNRGHFPSTDAAVKLLWLAICNIEDKRALEREKERGKPASQRKAPGR LVEGQIVTNWKQALAQLAAAYPDRITPYL >gi|294970489|gb|ADNU01000083.1| GENE 7 4394 - 4612 94 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGGEVGARLDRQRDPGPRPLGSSHLREGVRHAQCGERLASRPPGVCLGRRPGNRLPLSV SDGLCKPYREER Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:17:10 2011 Seq name: gi|294970470|gb|ADNU01000084.1| Brevibacterium mcbrellneri ATCC 49030 contig00125, whole genome shotgun sequence Length of sequence - 17821 bp Number of predicted genes - 17, with homology - 16 Number of transcription units - 11, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 122 - 192 73.7 # Gly TCC 0 0 + TRNA 380 - 456 83.6 # Pro TGG 0 0 - Term 449 - 497 14.8 1 1 Tu 1 . - CDS 531 - 1406 575 ## Svir_07240 hypothetical protein 2 2 Tu 1 . + CDS 1597 - 2361 609 ## Bcav_1068 abortive infection protein + Term 2415 - 2458 4.5 - Term 2353 - 2404 12.5 3 3 Op 1 . - CDS 2430 - 2897 526 ## COG0698 Ribose 5-phosphate isomerase RpiB 4 3 Op 2 . - CDS 2917 - 3522 551 ## Sked_24570 hypothetical protein 5 4 Op 1 . + CDS 3623 - 6238 1936 ## COG0308 Aminopeptidase N 6 4 Op 2 . + CDS 6262 - 7302 904 ## COG0668 Small-conductance mechanosensitive channel 7 4 Op 3 . + CDS 7299 - 7775 511 ## COG2346 Truncated hemoglobins - Term 7670 - 7707 2.7 8 5 Op 1 . - CDS 7762 - 8421 393 ## HMPREF0733_12105 hypothetical protein 9 5 Op 2 . - CDS 8422 - 8964 344 ## RSal33209_2852 thioesterase - Prom 9023 - 9082 1.7 10 6 Tu 1 . + CDS 9141 - 10034 632 ## COG1946 Acyl-CoA thioesterase - Term 10026 - 10072 17.5 11 7 Op 1 . - CDS 10091 - 11773 1772 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 12 7 Op 2 . - CDS 11814 - 12404 443 ## gi|295396673|ref|ZP_06806820.1| conserved hypothetical protein - Prom 12475 - 12534 3.6 13 8 Tu 1 . - CDS 12567 - 13076 424 ## Mlut_09740 single stranded DNA-binding protein - Term 13147 - 13188 1.8 14 9 Op 1 . - CDS 13220 - 14794 1031 ## PPA1638 putative ABC transporter 15 9 Op 2 . - CDS 14791 - 16497 1216 ## Ksed_08870 hypothetical protein - Term 16550 - 16597 6.1 16 10 Tu 1 . - CDS 16690 - 17451 217 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 17 11 Tu 1 . + CDS 17558 - 17728 139 ## + TRNA 17748 - 17820 78.1 # Arg TCT 0 0 Predicted protein(s) >gi|294970470|gb|ADNU01000084.1| GENE 1 531 - 1406 575 291 aa, chain - ## HITS:1 COG:no KEGG:Svir_07240 NR:ns ## KEGG: Svir_07240 # Name: not_defined # Def: hypothetical protein # Organism: S.viridis # Pathway: not_defined # 14 291 17 285 287 162 37.0 1e-38 MTRSKMIRSTTKRLDTVHSASYFAQEMVAELDELGVQRDAQYLAQRAAPLGQASAELVTA TFYSFSPAYVSAHVPACWEQAAPKEIHKARVRAAEKIIQRLVAGPDGQELVESIPLIRRA LAPVLEAADVCGKPLYAAHVSERRVAGEDASELVQLWWDITLLREFRGDAHLSALVVTGV GSVESIVLDSATGKSFAPYYMRKMRGWTSEEWAEVAEKLTMAGFLTSADDEATLTEEGVK LRAHVEGLTDLAVASPWDALSDEQVSDLQGLATLWAKAVAQSGIIPQKLFG >gi|294970470|gb|ADNU01000084.1| GENE 2 1597 - 2361 609 254 aa, chain + ## HITS:1 COG:no KEGG:Bcav_1068 NR:ns ## KEGG: Bcav_1068 # Name: not_defined # Def: abortive infection protein # Organism: B.cavernae # Pathway: not_defined # 1 252 31 279 284 243 56.0 4e-63 MLAGSAVVLFGLYDRPLYVWGLAALAASVALSWCAGTAFAKDILLIALGLGILSTISLEA DISWPNMFLMGTVLSASVFVPYAMSRWGYRDHAIRFPARQGQKWSRLEIGWLAFVVIVGW LVLPRYFFYSGAYLNWPAVITPSEIARLFVGVNAVGIWDELFFICTVFTLLHRHFSFWPA NIVTSIIFVSFLWELGYRSWAPFITIPFALVQAVIFTRTKSLPYTVTVHLLFDAVVFLSI VHAHHPQALPIFWY >gi|294970470|gb|ADNU01000084.1| GENE 3 2430 - 2897 526 155 aa, chain - ## HITS:1 COG:Cgl2369 KEGG:ns NR:ns ## COG: Cgl2369 COG0698 # Protein_GI_number: 19553619 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Corynebacterium glutamicum # 1 153 1 149 157 182 60.0 1e-46 MKIHLGTDHAGYEFKESLKKHLKDNGYEVVDHGAHEYDALDDYPAFCIAVAQGVVADRAE GLDSLGVVIGGSGNGEQMAANKVKGARCALSWNPEISRLAREHNDAWLVSVGARQHSEEE AISIVDAFISTPFSNDDRHVRRIGIMSEFETTGRV >gi|294970470|gb|ADNU01000084.1| GENE 4 2917 - 3522 551 201 aa, chain - ## HITS:1 COG:no KEGG:Sked_24570 NR:ns ## KEGG: Sked_24570 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 4 201 8 205 205 285 71.0 6e-76 MAKETLHMWFDPTCPWAWMTSRWALEVEKVRDVEVQFHVMSLSVLNEGRDLDPEYLDLMK KAWGPVRVIIAAAQEHGNSVIADLYTAMGTRIHLGENKDFDQVIKESLAEVGLPETLAEA AHTDAYDDALRASHKEGISLVGEDVGTPVIAVGDVAFFGPVVSPAPKGEAAGKLYDGTLL VAGTPGFFEIKRTRTVGPQFD >gi|294970470|gb|ADNU01000084.1| GENE 5 3623 - 6238 1936 871 aa, chain + ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 1 861 1 855 861 681 47.0 0 MSQLNLTRDDARTRAQLIDVDSYDITLVLDGNGDTFRSITTVRFSAQEGADSFIDAITDT VTSVVLNGEELDVSQVVSEGRIALPGLARRNELTVDAMFFYMNTGEGLHRFVDPVDNETY LYSQFEVPDSRRVFPVFEQPDMKATFAFNVIAPKHWEVFSNSPTPRPNDLGEFADLAESQ ESAIWQFAPTPPISSYITAIVAGPYTGVRDSLVSSDGETVPLGVFCRASLAPHLDAENII ETTKAGFAFFEEHFQTPYPFEKYDQIFVPEFNAGAMENAGCVTFVESYVFRSRATEATVE RRDVTILHELAHMWFGDLVTMKWWNDLWLNESFAEFMSTLATAEATRFDEAWTTFATLEK EWAYRQDQLPSTHPIEADIADLHDVEVNFDGITYAKGASVLKQLVAYVGRENFFTGLKAY FDAHAWKNTELRDLLVELEKASGRDLDEWVRVWLQESGVNVLTPELKVANGILTELLIHQ APWVIDGQPTPSLRPHRLAVGLYSLQGDKLVRTELIHLDVSQAVTSVPFSPETPKPDLVL VNDTDLTYAKVRFDDASLETALAHLSGIDDSLAQLLVLSTVWDMVRDAEIPLEKYIELLE SNIDALTHSTGLTVQLRQLATAVESYTEPQNRSALSARIADFLWDATLRSPAHSDQQFQL FRAFVAHATTPEQVDRLADFHTGAQNAPDGITIDKDLAWGIVTTLAVHDQISDEDIDVLM QEDNTASGIRSAHLARSARPTTHSKKRAYDLATSDVSLPNAVIAAIARGYSMGIEQADGA LVDSGDGHSFADRFYTHVEGWWNDRTLEIAQTLTLSLHPPVSQETATRTREWLESHPQAH KGARRIMRELLDTTERALRVRETSQNRSSDA >gi|294970470|gb|ADNU01000084.1| GENE 6 6262 - 7302 904 346 aa, chain + ## HITS:1 COG:BH2666 KEGG:ns NR:ns ## COG: BH2666 COG0668 # Protein_GI_number: 15615229 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Bacillus halodurans # 40 319 11 271 276 154 33.0 2e-37 MVEQRMSYSIVASTCEPTPISETVERAAEGVDKWWTFLIGAPLRIAILVVMAILVTFLVR LLIRKFARKIAEGTTAVSSRRFGGDARDRVIKTDPASVARRAQRAQTVGSLLSSIAAIII FVIMALMIMQELGYNPAPILASAGVAGVAIGFGAQSLVRDYLSGFFIVAEDQYGIGDTVD LGEAVGTVEDVGLRTTKVRGIDGTLWHVPNGEILRVGNQSQGWARAVMDLPVPYDADQKV VDEAIQAAVESMRNKPDLAPSILEEPEIWGVQEISGNAVTIRTVIKTKPNEQWGVARAFR AEIQRELRKRGITIAIPAQSLIGTVPGPQTHTATTTSDTADNKDNE >gi|294970470|gb|ADNU01000084.1| GENE 7 7299 - 7775 511 158 aa, chain + ## HITS:1 COG:MT2546 KEGG:ns NR:ns ## COG: MT2546 COG2346 # Protein_GI_number: 15841995 # Func_class: R General function prediction only # Function: Truncated hemoglobins # Organism: Mycobacterium tuberculosis CDC1551 # 5 130 6 133 134 113 48.0 1e-25 MTAPQRPDSVFAAVGGHATFTTLVDAFYASVAEDEYLISMYPEGHELDGAKHRLQTFLEQ YFGGPTTYQEERGHPRLRMRHNPYPVDTKAKEHWLHHMRKALDTVKLPPMYDNLMWDYFE RAATAMINTPDPLDGRTRLDISASQTDPQTPQDRSTHE >gi|294970470|gb|ADNU01000084.1| GENE 8 7762 - 8421 393 219 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0733_12105 NR:ns ## KEGG: HMPREF0733_12105 # Name: not_defined # Def: hypothetical protein # Organism: R.dentocariosa # Pathway: not_defined # 12 218 73 284 291 117 32.0 5e-25 MGIELPSSEVLADLNQYLSRVLRVDEDAAVRITVHGTVAVISTAPLFPVGLGDDMPLALA MRMIPIVSSAEGNIDEVVPASAVVDRLVRSSKTDSLELRVPPQRMQKSWTGIAPPRAGWA PVAEVDAESLRDVADAGVREIAEGVPEGAGAHAVSALRRAVWKRPIEGISDEVKSPVPAG LAFAMDACGFLRVSRPVKVFAAPQWLRLSAPHGHVLTRV >gi|294970470|gb|ADNU01000084.1| GENE 9 8422 - 8964 344 180 aa, chain - ## HITS:1 COG:no KEGG:RSal33209_2852 NR:ns ## KEGG: RSal33209_2852 # Name: not_defined # Def: thioesterase # Organism: R.salmoninarum # Pathway: not_defined # 16 170 7 148 154 103 38.0 2e-21 MSFQLVNPLLTGAFTRVLLELRWGDMDAYGHINNVTQMRLLEEARVRAFGSPTADRDAQT VAGPLGVVPSCVGVEIPPVFSEVAHTHDILVASHAIEYRAPIPYREGPVAIDTVISKVAP VVMTVGYVIAEPDGSKAYTVAETDVVFVDRESGRAQRLQEEHAEALRAVVNPGPAMRRRK >gi|294970470|gb|ADNU01000084.1| GENE 10 9141 - 10034 632 297 aa, chain + ## HITS:1 COG:SMc03805 KEGG:ns NR:ns ## COG: SMc03805 COG1946 # Protein_GI_number: 15966941 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Sinorhizobium meliloti # 12 294 14 291 294 210 41.0 3e-54 MKVSMEENVSELMQVLKVERVDGPAPGGEADCFKAWNQKKPGGRLFGGQVLAQCVAATSQ TITDDRFIHSIHGYFLRAGRDDTDLFLGVDNLRDGGSFSTRRVQAYQNDVPIFSAIASFQ TDQDGLEHSNAFPEDIPGPDELQDLHTILGEADDVFVKHWIARRPFDIRPVDPELYTGFS GAKTSHTRYWLRAIAPVSTDRVINAATAAYASDYSLLESILRRHGLSWSDPRLRMASLDH AMWWHRPINFNEWHLIDYRSPAAEGGRGLGMGSIFTQSGKLVASVAQQGMVRVKERQ >gi|294970470|gb|ADNU01000084.1| GENE 11 10091 - 11773 1772 560 aa, chain - ## HITS:1 COG:MT2552 KEGG:ns NR:ns ## COG: MT2552 COG0488 # Protein_GI_number: 15842003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 559 1 557 558 886 80.0 0 MAEFIYTMHKARKAHGDKVILDDVSMSFYPGAKIGMVGPNGAGKSTILKIMAGLDQPSNG EARLSPGYTVGILLQEPPLNEEKTVRENVEEGVGSIKEKLDRYNEISNEMSNPDADFDAL MEEMGKLQEEIDAADAWDLDSQLDQAMDALRCPPGDADVRVLSGGERRRVALCKLLLEKP DLLLLDEPTNHLDAESVLWLEQHLSTYPGAVIAITHDRYFLDHVAEWIAEVDRGHLYPYE GNYSTYLEKKKERLQVQGKKDAKLQKRLAEELEWVRSNAKARQTKSKARLARYEEMAAEA EKMRKLDFEEIQIPPGPRLGNVVIEAENLQKGFDDRTLIDGLSFSLPRNGIVGVIGPNGV GKTTLFKTIVGLEPLDGGNLKVGDSVKISYVDQSRGGIDPDKTLWEVVSDGLDYIQVGAV EMPSRAYVSAFGFKGPDQQKKAGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL SSLENALLQFPGCAVVVSHDRWFLDRVATHILAWEGTEENPANWYWFEGNFEAYEKNKVE RLGEEAARPHRVTHRRLTRD >gi|294970470|gb|ADNU01000084.1| GENE 12 11814 - 12404 443 196 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396673|ref|ZP_06806820.1| ## NR: gi|295396673|ref|ZP_06806820.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 177 1 177 196 299 100.0 9e-80 MTVVALSGCGLFVNKPASAPPQQQTKEKEALVTKVLKDVKPLTEIDGVPSSQEFFEHMIK AGYKPENLEATIDRSPLDHDVPSKMFGVKIKESCVIGEVRQGSVSGSLVEPNASTESCLY GDVDRPEGIEPPKGDERSDKDEDNGVGHLPGDDLHERKADDSSEGSDTPEEENTPQPKKK KKKKENSESGSSNSIG >gi|294970470|gb|ADNU01000084.1| GENE 13 12567 - 13076 424 169 aa, chain - ## HITS:1 COG:no KEGG:Mlut_09740 NR:ns ## KEGG: Mlut_09740 # Name: not_defined # Def: single stranded DNA-binding protein # Organism: M.luteus # Pathway: DNA replication [PATH:mlu03030]; Mismatch repair [PATH:mlu03430]; Homologous recombination [PATH:mlu03440] # 1 168 1 160 183 77 32.0 2e-13 MKQLNYFVGTIGSEIRSGTTQENNPWTSFRVAVNYDRYDRESREYKNVDTNWYEVMCYNA LASNVRASVNCGDSVIVIGRLRERTWTTDEGQTGSTMQILADAVGHNLQFHGARSLRPKK ATNDESESESSGWDEVTRKEPALVGAGAGNTESLSAAPDSGAENNDPPF >gi|294970470|gb|ADNU01000084.1| GENE 14 13220 - 14794 1031 524 aa, chain - ## HITS:1 COG:no KEGG:PPA1638 NR:ns ## KEGG: PPA1638 # Name: not_defined # Def: putative ABC transporter # Organism: P.acnes # Pathway: not_defined # 12 519 13 528 536 288 35.0 5e-76 MKAAEEISRLRDGIKRALELESGRIDTQTITDALELLKKTEARLDLGLDRTVVAFAGSTG SGKSSLFNAVSGLEIAQVGVRRPTTSKPTACVWGDGGEEFLTWLGVPIDNRTWRESALDG KDEEPLRGLILLDLPDHDSTAASHRHEADRLVGMVDMVVWVVDPQKYADFSIHSRYLRKL AKYSHNMVVVLNQIDRLNPEQQKATGEHLKSLLEADGLEDADVKLVSAVTRQGVPELRQE LVKVIKSNQASVQRLYTDMRHMADRIQEQLGTPVESPDQLAGTERLLDAMTDAAGVDAVA HTVHDDYMRRAYRATGYPLLAWAQRDKADPLGAKHGGDRDDLIRAARPETTRTQNARVNL AAHEVVADATSSLPHSWRQAIGRAEKQSTAQLTHTLDEAVTGVAIEVVSPGWWKVAKFFQ TLFFVLTIVGLGWLIVNVVLLAMSLDPGGILMWIIPGGLLLVGILGSVITSSSAAGARRK GASAQADKVRDDLVSAVREAAAGSYLEPISSVLREHKEVYDALT >gi|294970470|gb|ADNU01000084.1| GENE 15 14791 - 16497 1216 568 aa, chain - ## HITS:1 COG:no KEGG:Ksed_08870 NR:ns ## KEGG: Ksed_08870 # Name: not_defined # Def: hypothetical protein # Organism: K.sedentarius # Pathway: not_defined # 8 559 1 557 566 430 48.0 1e-119 MIDGNRTLNPAIHQTLGDLVTRVDDVQFPLAVETTTPGENLQAQLKNQLTDYLMPRVADT EAPLLIVFGGSTGAGKSTLINSIIGEDVSIASVLRPTTRWPVLVCNPADRTHFTSDRILP GLERVSQEATDTQTPQVRIVDHPAIPPGVAVLDSPDIDSVMDSNRKLARQLLAAADLWVF VTTAARYADAVPWELLKQSADNGTAVAMVLDRVPPNANREVRHHLSSLLKEARLGTAPIF TVPELTLEDGRLPQSAIFPLRSWIANLSSNPRARNAVVQRTLHGALAAVPDKVETLAEYA QAQVDAHERLAEVVDTEFAHARQRLGEALVSGNVLRGEVLARWQDFVGTGQLFRGLEPTV ARIRDRITAAVTGKRDTAEPLGQAIESSAALLVREQAVTALGGVVDAWHETTSGATILKD NPQLEKLPADMDTTIKRTIAEWSDQVNDLVREVGQSKRARARILSFGVNGVGAVLMLAVF AGTGGLTGAEAGIAGGTAVVAGKLLDTIFGDQVTRDLSSKARHMLLEATGELLTSFREPF DSVLKDSTVNPEQAAELRTINERLKGML >gi|294970470|gb|ADNU01000084.1| GENE 16 16690 - 17451 217 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 240 4 240 242 88 30 4e-17 MALLEGRTALVTGGTLGIGFGIAQTLAAHGAQVAVTGVTEEEGTQAREAGFDAYVLDVRD REACSAVVAEVVEKFGGLSLLASNAGIYPQAPIAEMTDDDIDTIFDINVKGTVHIVQAAI PALTESGRGRVVVTSSITGNYTGFPAWSHYGATKAAQMGFVRSAAIELAPHKITVNAVLP GNVLTPGLKELGQTYLDRMARSVPLGFLGDPTDIGEAVAFLGSDGARYITGQDIVVDGGQ ILPESPEALEDLH >gi|294970470|gb|ADNU01000084.1| GENE 17 17558 - 17728 139 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MASKQSAIEEAREVLKAARKTTDPEEHRNLIREARVLTMMEQAHQLTRIANKLEEQ Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:18:22 2011 Seq name: gi|294970426|gb|ADNU01000085.1| Brevibacterium mcbrellneri ATCC 49030 contig00128, whole genome shotgun sequence Length of sequence - 44826 bp Number of predicted genes - 44, with homology - 43 Number of transcription units - 20, operones - 11 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 298 - 333 4.0 1 1 Tu 1 . - CDS 409 - 744 422 ## gi|295396681|ref|ZP_06806827.1| conserved hypothetical protein - Prom 845 - 904 2.9 - TRNA 1199 - 1272 51.7 # Leu TAA 0 0 - Term 1282 - 1331 14.1 2 2 Op 1 . - CDS 1342 - 2715 1666 ## COG1252 NADH dehydrogenase, FAD-containing subunit 3 2 Op 2 . - CDS 2768 - 4051 890 ## COG1404 Subtilisin-like serine proteases 4 2 Op 3 4/0.000 - CDS 4026 - 4961 739 ## COG0248 Exopolyphosphatase 5 2 Op 4 . - CDS 4961 - 5461 404 ## COG1507 Uncharacterized conserved protein 6 2 Op 5 . - CDS 5464 - 5910 372 ## gi|295396686|ref|ZP_06806832.1| possible septum formation initiator - Prom 5951 - 6010 1.6 - Term 5933 - 5970 4.1 7 3 Op 1 . - CDS 6025 - 7305 1753 ## COG0148 Enolase 8 3 Op 2 . - CDS 7348 - 8097 633 ## COG2365 Protein tyrosine/serine phosphatase 9 3 Op 3 2/0.000 - CDS 8075 - 8863 571 ## COG1694 Predicted pyrophosphatase 10 3 Op 4 . - CDS 8860 - 12468 2597 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 11 4 Tu 1 . + CDS 12500 - 13219 635 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 12 5 Op 1 22/0.000 - CDS 13216 - 13800 588 ## COG0193 Peptidyl-tRNA hydrolase - Term 13807 - 13849 12.6 13 5 Op 2 9/0.000 - CDS 13862 - 14518 556 ## PROTEIN SUPPORTED gi|62424035|ref|ZP_00379187.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) - Prom 14631 - 14690 2.6 - Term 14661 - 14701 10.3 14 6 Op 1 11/0.000 - CDS 14732 - 15703 859 ## COG0462 Phosphoribosylpyrophosphate synthetase 15 6 Op 2 . - CDS 15700 - 17151 1292 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) - Prom 17322 - 17381 3.0 - TRNA 17176 - 17250 49.7 # Gln TTG 0 0 16 7 Op 1 . + CDS 17302 - 17661 384 ## AARI_20290 hypothetical protein + Term 17677 - 17715 10.8 17 7 Op 2 . + CDS 17743 - 20052 2179 ## COG0210 Superfamily I DNA and RNA helicases + Term 20073 - 20111 5.2 - Term 20061 - 20099 9.0 18 8 Tu 1 . - CDS 20120 - 20302 378 ## gi|295396698|ref|ZP_06806844.1| conserved hypothetical protein 19 9 Op 1 8/0.000 - CDS 20445 - 21578 1274 ## COG1960 Acyl-CoA dehydrogenases 20 9 Op 2 . - CDS 21589 - 22659 940 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 21 10 Op 1 . - CDS 22785 - 23009 198 ## gi|295396701|ref|ZP_06806847.1| conserved hypothetical protein 22 10 Op 2 10/0.000 - CDS 23107 - 24639 1378 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 23 10 Op 3 . - CDS 24632 - 25246 321 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 24 11 Tu 1 . + CDS 25307 - 25741 378 ## gi|295396704|ref|ZP_06806850.1| F0F1 ATP synthase - Term 25620 - 25664 -0.9 25 12 Tu 1 . - CDS 25730 - 26875 628 ## gi|295396705|ref|ZP_06806851.1| hypothetical protein HMPREF0183_2349 - Prom 27014 - 27073 4.5 + Prom 26902 - 26961 2.2 26 13 Tu 1 . + CDS 27026 - 28228 1066 ## KRH_03710 hypothetical protein + Term 28241 - 28292 23.1 - Term 28176 - 28214 2.0 27 14 Op 1 . - CDS 28287 - 29687 946 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 28 14 Op 2 13/0.000 - CDS 29775 - 31538 608 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 29 14 Op 3 49/0.000 - CDS 31538 - 32362 630 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 30 14 Op 4 38/0.000 - CDS 32362 - 33309 775 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 31 14 Op 5 . - CDS 33315 - 34820 1495 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 34867 - 34926 2.9 32 15 Tu 1 . + CDS 34895 - 35104 98 ## 33 16 Op 1 . - CDS 35026 - 35451 209 ## gi|295396712|ref|ZP_06806858.1| hypothetical protein HMPREF0183_2356 34 16 Op 2 . - CDS 35444 - 36082 370 ## gi|295396713|ref|ZP_06806859.1| hypothetical protein HMPREF0183_2357 35 17 Op 1 8/0.000 - CDS 36221 - 36811 462 ## PROTEIN SUPPORTED gi|15803493|ref|NP_289526.1| putative deoxyribonucleotide triphosphate pyrophosphatase 36 17 Op 2 3/0.000 - CDS 36820 - 37566 650 ## COG0689 RNase PH 37 17 Op 3 . - CDS 37645 - 38469 632 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 38 17 Op 4 . - CDS 38472 - 39077 519 ## AAur_2573 hypothetical protein 39 17 Op 5 . - CDS 39074 - 39355 317 ## COG2127 Uncharacterized conserved protein - Prom 39384 - 39443 2.5 40 18 Tu 1 . + CDS 39431 - 40747 1351 ## COG1488 Nicotinic acid phosphoribosyltransferase - Term 40736 - 40791 19.8 41 19 Op 1 . - CDS 40813 - 41895 1000 ## COG1064 Zn-dependent alcohol dehydrogenases 42 19 Op 2 . - CDS 41950 - 43728 1335 ## COG1061 DNA or RNA helicases of superfamily II 43 19 Op 3 . - CDS 43725 - 43994 246 ## KRH_09940 hypothetical protein 44 20 Tu 1 . + CDS 43993 - 44490 395 ## Bfae_06570 hypothetical protein + Term 44550 - 44599 17.0 + 5S_RRNA 44604 - 44717 91.0 # Z50061 [R:1..120] # 5S ribosomal RNA # Amycolatopsis orientalis # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Pseudonocardineae; Pseudonocardiaceae; Amycolatopsis. Predicted protein(s) >gi|294970426|gb|ADNU01000085.1| GENE 1 409 - 744 422 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396681|ref|ZP_06806827.1| ## NR: gi|295396681|ref|ZP_06806827.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 111 1 111 111 206 100.0 7e-52 MRRQDELDKLTEAAREFAVNELGRTDYELSVIDSLIEHNETHAALEGLWLEACHEGVLWP DHLVEQFRDLPERFDLGQEFEEFMECQDNIRKQNAIDHDGNAPTYHLPDTM >gi|294970426|gb|ADNU01000085.1| GENE 2 1342 - 2715 1666 457 aa, chain - ## HITS:1 COG:all2964 KEGG:ns NR:ns ## COG: all2964 COG1252 # Protein_GI_number: 17230456 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Nostoc sp. PCC 7120 # 12 423 6 412 442 185 30.0 2e-46 MALIRNSKLRPRVLVVGGGYLGLVTAQNLLKNLGRGEATVTVVDPNPYMTYQPFLPEVAA GSIEPRHAVVPLRRNLKGAEVVTGYVRSINHAKKYAVVEPEGDEAFELDYDHIVLAAGSV ARALPIPGLDEEAIGVKRIEEAVALRDHILNQLDAAALMENDEERRKALTFVFVGGGFAG IEALAEIEDMVRSAVAQHETLTEADVRFVLVEAAPRVMPEVGEAQARWVVDHLRERGVDV YLETFLQDCTNKRCKLSNGEEFDADTIVWNAGVKANPLLVDSDLPLDDRGRLTVRADLRV EDENGVVEGAWGAGDNAAVPDLSGGGVGGYCVPNAQHAVRQAPVLAANILAALRGETEFR QYFHKSLGAVAGMGLYKGVAQMGDFETRGFLAWLMHRGYHGYAIPTVDRKLRVFTNWFLN FVAGRDLTALKDLDVPRKNFVEAAHSKPAPRKEPAKK >gi|294970426|gb|ADNU01000085.1| GENE 3 2768 - 4051 890 427 aa, chain - ## HITS:1 COG:BH1491 KEGG:ns NR:ns ## COG: BH1491 COG1404 # Protein_GI_number: 15614054 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 43 333 313 584 588 122 33.0 1e-27 MAWRGHVPKLRQVLGSLAILVLGGSLLSPGAPVHAAPKASPGQWFIESYGIDKAWERTTG KGVKVAIIDSGVKGDHENLTGKVVGAKDFSGSKTDGQTPVGPKDTVRHGTAVAGVIAGNG SNLGPRGVAPDAELLSASMWLGSGGPADAPSSRQQAADAIKWSVDNGAKVINMSLGWADP AWPEYWDEAFSYAYEKDAVIIACVGNASQGATRAWSPATVPGVVGVGGLKKDDSIDSEST APGIAVDLMGPAQKIPVPYYEGGYAEAEGCSFAAPFVSGVAALIRSEHPEYSADQVVAAV TSTAKPVKGHDQEKPVDPIVGHGRIDPVAALDAKPGKDVKSAKKELAEWVRMHRRAQESS KPGKDVIEGDADNPGTTSAHQPTPHDRNQLPWFYVPLLSVGGALILSGVVVWLVQSRRGK NDSGKMR >gi|294970426|gb|ADNU01000085.1| GENE 4 4026 - 4961 739 311 aa, chain - ## HITS:1 COG:MT1054 KEGG:ns NR:ns ## COG: MT1054 COG0248 # Protein_GI_number: 15840454 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 2 307 5 318 319 257 53.0 2e-68 MRVAAIDCGTNSIRLLIADTDGTTLTDVVREMRVVRLGQGVDATGAFAPEALERTFSAID EYAELITDHGAEHARFVATSATRDATNRETFFAGVRERLSIEAEVITGEEEAGLSFIGAT AGLGASVDYPALVMDLGGGSTELVLGTDAVNSAFSMDIGCVRMTERHMHSDPPTEEEVAA AVADIDEWYDRARQIVDTSQARTLVGVAGTITTVTAAYLDLPTYDPHAIHGAQLEADRVL ETCQKLAAMTRAERTALPYMHPGRVDVIGAGATVYARLITRIVDDAPGLTIRSSETDILD GIALGVARSRA >gi|294970426|gb|ADNU01000085.1| GENE 5 4961 - 5461 404 166 aa, chain - ## HITS:1 COG:ML0257 KEGG:ns NR:ns ## COG: ML0257 COG1507 # Protein_GI_number: 15827049 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 4 162 1 151 167 151 49.0 5e-37 MVGLASKADLETVRQQLGRIPRGVLGVAARSVTGEPLVIATAPRLEDGSPFPTTYYLTHP DYVAECSRLEASGIMSEWTAELAENEELAAQYLAAHRAYLHDRKTLGDEAGIEFVEEIAD FSAGGMPNRVKCLHALVGHALAAGPGVNPIGDRAIERMNNVPGVQR >gi|294970426|gb|ADNU01000085.1| GENE 6 5464 - 5910 372 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396686|ref|ZP_06806832.1| ## NR: gi|295396686|ref|ZP_06806832.1| possible septum formation initiator [Brevibacterium mcbrellneri ATCC 49030] possible septum formation initiator [Brevibacterium mcbrellneri ATCC 49030] # 1 148 1 148 148 235 100.0 6e-61 MNKKTQSHRVTSSSKSSGRKKPRKRLSFGRKTALAGVFILVALMFVPTVTTGIRQAQQIS VLERDNAATEQEIRDLEKKQQELKDPKHIERRARDEYHYAKPGEKIFIVESDKDEHGSAN QANKGERQRPWYVELSDSLKTVGLATEE >gi|294970426|gb|ADNU01000085.1| GENE 7 6025 - 7305 1753 426 aa, chain - ## HITS:1 COG:Cgl0949 KEGG:ns NR:ns ## COG: Cgl0949 COG0148 # Protein_GI_number: 19552199 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Corynebacterium glutamicum # 1 426 1 425 425 577 73.0 1e-164 MAQIIAANAREILDSRGNPTVEVEILLEDGAIGSACVPSGASTGEWEAVELRDNDPERYD GKGVLSAVDSVLDEIHDAVAGIEADDQRIIDQTLIDLDGTPNKERLGANAILGTSLAVAH AAARSVDLPLFRYLGGPNAHVMPVPMMNILNGGAHADSNVDIQEFMIAPIGAATFSEALQ WGAEVYHALKKVLKAKGLGTGLGDEGGFAPNLESNAQALDLIIEAIQATGRTPGKDIALA LDVASSEFFKDGSYSFEGAQKSAEEMTAYYTELVEKYPLVSIEDPLDENDWDGYVHLTET LGDRVQLVGDDLFVTNPERLQTGIEKGAANSLLVKVNQIGTLTETLEAIALAHSNGYTTM VSHRSGETEDTTIADLAVATNAGQIKTGAPARSERVAKYNRLLVIEEFLGDAARYAGARA FPRFNG >gi|294970426|gb|ADNU01000085.1| GENE 8 7348 - 8097 633 249 aa, chain - ## HITS:1 COG:DR1912 KEGG:ns NR:ns ## COG: DR1912 COG2365 # Protein_GI_number: 15806911 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Deinococcus radiodurans # 33 247 25 231 240 84 31.0 2e-16 MHQPTRIEIGGTFNFRDIGGWNTPLGQVVQHKVFRSDGLSALTDDARTRLHELGIVMVID LREERERTNAPNALGDLQVNHIHAPLFGNRLYPADRERPDRLVLEKRDLETLYGVLLDHF AMNVAHVIDLVANAEGPLVYHCSAGKDRTGVVTAFIHELVGVARDDVVTDYNATEQFLGA EFLAAISANFANAGIVANLSETATQAPRVYMDNMLRRVDEEFGGVEKFLLSGGMDAKTPD LLRHKLLVH >gi|294970426|gb|ADNU01000085.1| GENE 9 8075 - 8863 571 262 aa, chain - ## HITS:1 COG:aq_342 KEGG:ns NR:ns ## COG: aq_342 COG1694 # Protein_GI_number: 15605856 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Aquifex aeolicus # 16 250 13 215 257 99 30.0 9e-21 MTRWEPVDPETLSTAEVVAYLRARCPWAAAHTHASLAPYVLEETYELLDAIEEYSTNPSS TTREELVGELGDVAYQVLFHAALLDQPNATPTSASPPTGNYVSPRAITEVADRLRAKVVR RHPHVFETTGPTSIEDVERAYERIKAEEKRDAGDGDAVDVSAGDNLAHEACASIPASMPA LARTQAVLSRLDRVALSVESNADVAGVPETEDEDVTETTIGQELLAAVRKAHANGIDAEG ALHRATDALIDERGQRAPTDTH >gi|294970426|gb|ADNU01000085.1| GENE 10 8860 - 12468 2597 1202 aa, chain - ## HITS:1 COG:Cgl0938 KEGG:ns NR:ns ## COG: Cgl0938 COG1197 # Protein_GI_number: 19552188 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Corynebacterium glutamicum # 39 1182 37 1194 1214 1116 52.0 0 MSLTGISASVTELPGFNQAVDALNTDPGGSIDVVKGLWPFLIARASATAPVVAVTSTGRE AEELTEALADHLGPTSVVFFPSWETLPHERLSPRSDTVGKRLSVLRALSHPGERPLSVVV TTVRALLQPIVKGLGDLEPVTLKVGDEHDLTELAEHLSHLAYSRVDMVSRRGEFAVRGGI IDIFPPTEDSALRVEFFGDEVEEIRRFSVADQRSIEPEEGAETPHVWAPPCREVLLSAKV RERAAALVEQIPAAADMLNKIADGVAVDGMESLAPVLADGMEPLLARLPSTTRIVVLSPE RVETRAADLVATTDEFLAAAWTATASGGEAPIDLSPASFRTLEETRTAADQLSLPWWEVG GFARDEELVEATENHVTVDAREPRGYAGDVEAVLTDVRDHVSHAWNVYVLTEGKGSGSRL VEVFSEADILAHFEPVIEAPAPPATVTVTTAATYAGFVSEKAKLAVLTESEVLGRSVQNS RRGRKSLPRRRRRGQVDPLDLKPGDYVVHEQHGVGRFVELVQRTTRKGKNSLTREYLVIE YAPSKRGHPGDRLFVPSDSLDQITRYVGGESPSVNKMGGADWAKTKQRARKAVKEIAGEL VRLYSARMASKGFQFSPDTPWQRELEDAFRYVETADQLTTIDEVKEDMEKPLPMDRLICG DVGYGKTEVAVRAAFKAVQDGKQVAVLVPTTLLVQQHFETFRERYAGFPVTVGRLSRFQT PKESQQTKDDIHSGKLDVVIGTHRLLSGEVRFKNLGLVIIDEEQRFGVEHKETLKAMRTN VDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTYVGKYEEKQVTAAIRRELLR EGQVFFIHNRVQDIDAVATRLAELVPEARIAVAHGKMSEQQLEKVIVDFWEKQYDVLVCT TIVETGIDIANANTLIVDRADRMGLSQLHQLRGRVGRGRERAYAYFLYPSDIELTETAHD RLETVAAHTELGAGMQVAMKDLEIRGAGNLLGGQQSGHVEGVGFDLYVRMVGEAVANFKG EAEEELPEMRIELPIDAHLPTNYIEQERLRLEAYRKLATATDEAGVNEVLAELTDRYGPY PPEVAVLADVARLRIRARASGISDIVTQGNNIRFGPVELADSQVVRLKRLYPRSLIKPAL RSVLVPKPTSGQGFAASDVTDTALLEWCMKFLNAILPVEKADSGETAGDSGNPGGSSEKG ES >gi|294970426|gb|ADNU01000085.1| GENE 11 12500 - 13219 635 239 aa, chain + ## HITS:1 COG:slr1461 KEGG:ns NR:ns ## COG: slr1461 COG0705 # Protein_GI_number: 16332120 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Synechocystis # 1 199 1 188 198 114 38.0 2e-25 MSQSHKTGDEDSLGAIGVDVAKRLASPLIMLAAMWVIRIADFVIPIRFNGAGLRSWDFSH WYGIFTMPFLHSSWPHLLANSLPFLVLGGLVVADGVVRFWAVTGIVMVTSAVGTFFVNEP GTLTVGASGLVFGYFGYLAVAAFFARTWSGRIARGIISLLVIGIYGSAMLFGVLPRLGHI SWQAHLFGLLGGVFAAWFVLAWAGRRKSQRPRAGTSGTSGGKTVDTGDPELDAILRNLD >gi|294970426|gb|ADNU01000085.1| GENE 12 13216 - 13800 588 194 aa, chain - ## HITS:1 COG:Cgl0914 KEGG:ns NR:ns ## COG: Cgl0914 COG0193 # Protein_GI_number: 19552164 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Corynebacterium glutamicum # 4 181 10 180 180 166 46.0 2e-41 MRYLIIGLGNPGPRYANTRHNIGHMVLDELARRCGATLVSTKTRALAASVGDLGGVVGTK AVLMKSATYMNESGIPVRQLADFYSIDPEHVIAIHDDVDLPFDSIKLKLGGGEGGHNGLR SMSKHLGTRDYLRVRAGVGRPPGRMDTADYVLQNFSSTERKDLPIFVSDCADAVEDLVLK GLTEAQQRYHSRQN >gi|294970426|gb|ADNU01000085.1| GENE 13 13862 - 14518 556 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62424035|ref|ZP_00379187.1| COG1825: Ribosomal protein L25 (general stress protein Ctc) [Brevibacterium linens BL2] # 1 218 1 213 213 218 50 4e-56 MADIKLEAELRENYGKGYARRTRAAGRVPGVLYGRGNEPAHLSFDGHAIMMAMKNPNSLV EISTADGKVKSLAVARDIQRHPVRRDIIHVDFIIVKRGEKIEVEIPVSPVGEAAPGTLVS VETQTLRVLADPTQIPELFELSIEDRKVGEHVFAKDVELPEGVELIDDEEMMLIHVAAEM TEAELESELESEAVDEEVAASTGAEPSEEAASESSDDE >gi|294970426|gb|ADNU01000085.1| GENE 14 14732 - 15703 859 323 aa, chain - ## HITS:1 COG:ML0248 KEGG:ns NR:ns ## COG: ML0248 COG0462 # Protein_GI_number: 15827044 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Mycobacterium leprae # 10 322 11 324 327 427 66.0 1e-119 MNSITATGEKKLVLVSGRAHEELAQQVAENLGTELLPADVYNFANGEIYVRFSESVRGCD AFVLQSHCAPINEWLMEQLIMVDALKRASAKRITVIAPFFPYARQDKKHRGREPISARLV ADLYRTAGADRIITVDLHTAQIQGFFDGPVDHLVALPILSDYVRNNYEQPLAVVSPDAGR IKVAENWSAALGGCPLAFIHKTRDIDRPNQTKANRVVGDVKGRMCVLVDDMIDTGGTIVQ AAEACMAEGAKGVVIVATHAVFSGPAVERLKNSVANEVIVTNTLPLSEEKVFDKLTVLSI APLLGRAVHEVFEDGSVTSLFNI >gi|294970426|gb|ADNU01000085.1| GENE 15 15700 - 17151 1292 483 aa, chain - ## HITS:1 COG:Cgl0919 KEGG:ns NR:ns ## COG: Cgl0919 COG1207 # Protein_GI_number: 19552169 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Corynebacterium glutamicum # 7 468 8 468 485 491 59.0 1e-138 MTQQSPAAVIVLAAGAGTRMKSSTPKVMHPIGGRSLLHHAVDAAAGVNPDHLVVVLRHER DRVGEHVANIAQARECAVLVADQDDVPGTGRAVECALTQLPQNLTGTIVVTYGDVPLLEA DTIHDLVVFHEEHSNAVTVLSAHVKQPRGYGRIVRDATGTLEKIVEEKDATEHERAITEI NSGIYAFDAGVLRTSLAAVGTDNAQGEKYLTDVIGIARSQGSAVAALAIDDVWQVEGAND RVQLATLGKELNRRTVEKWMRAGVTVVDPDTTWIDSDVTLNPDVTILPGVQLHGACEIAS GAVIGPDTTLADTEVGEGAQVIRTHAQLAVVRAGATVGPFAYLRPGTDLGENGKIGTFVE TKNAQIGTGSKVPHLTYVGDATIGKNSNIGASSVFVNYDGVNKHRTVVGDNVRTGSDTMF VAPVTVGDGAYSGAGTVIRKDVPAGALAITVAPQRNIEEWVVKNRPGTPAADAASANKET DEQ >gi|294970426|gb|ADNU01000085.1| GENE 16 17302 - 17661 384 119 aa, chain + ## HITS:1 COG:no KEGG:AARI_20290 NR:ns ## KEGG: AARI_20290 # Name: not_defined # Def: hypothetical protein # Organism: A.arilaitensis # Pathway: not_defined # 1 117 1 113 116 73 42.0 2e-12 MEILRSILLILHLVGMAIIVGGYFTYMRSPRVEAGMLHASFLQLVTGLALVGIQEAMGGA NHMKIGIKLVLAILVTVFAFIGNRKQKAHDQADGPQPSATMAHLTGVFAILAVIVAVTL >gi|294970426|gb|ADNU01000085.1| GENE 17 17743 - 20052 2179 769 aa, chain + ## HITS:1 COG:MT0976 KEGG:ns NR:ns ## COG: MT0976 COG0210 # Protein_GI_number: 15840373 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 10 769 6 771 771 775 54.0 0 MNFDFLDSQSDSQPEEPVAHIAPHQDELLEGLNPQQRQAVMHSGSALLIVAGAGSGKTTV LTRRIAHILATGQAHPGQILAITFTNKAAREMLDRVTSLVGERARGMWISTFHSACVRIL RREARDRTSNFSIYDAQDSLRLITQVTKELDLDPKKFAPKTLRNRISNLKNECVTASEFE ATAQENNPLEQATARVYSRYQERLAVANAYDFDDLIMETVRLLTHNPEIARNYRARFTHI FVDEYQDTNPAQYALIRVLAGADLPEPTGQLTVVGDADQSIYAFRGATVRNIVEFEKDFP HAQTIVLEQNYRSTQNILSAANAVIRNNDDRRDKNLWTDQGSGEKVVGWVASTEHAEAQF IVDTIDELMDESDLTYGDFAVFYRTNAQSRAIEDALVRAGLPYKVVGGTRFYERKEIKDV LAYAHVLSNPSDDVNLRRILNVPKRGIGDRGEAFIAALANRERISFYDALLRAEEAPGMT KRTLGPLQTFAKLLSDLLEASQGAQPSRVLEAIMEQTGYLDGLNRSTDPQDESRVDNLAE LVAVAEDFQHTQPEATLNDFLERVSLTADADSVPDSQAGEITLMTLHTAKGLEFPVVFLT GLEDGTFPHQRSFTSATELAEERRLAYVGLTRAMQRLFLSRSETRSMWGQSSYNPPSRFL QEIPEELIDWKSTGSVTAPVASSANRSLSAGRYTSGGRTAASVGRSGSRIRPQREVPEVA VGDTLSHDSFGLGTVVEVTGSGDKTVAHVDFGSEGTKRLLMRYAPVQKL >gi|294970426|gb|ADNU01000085.1| GENE 18 20120 - 20302 378 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396698|ref|ZP_06806844.1| ## NR: gi|295396698|ref|ZP_06806844.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 60 1 60 60 68 100.0 1e-10 MGLGDFADKAKDAVKSEQAEGVTDDVLDKGADFANDKTGGKFEDQVNQGRDAADGHLGNE >gi|294970426|gb|ADNU01000085.1| GENE 19 20445 - 21578 1274 377 aa, chain - ## HITS:1 COG:BS_acdA KEGG:ns NR:ns ## COG: BS_acdA COG1960 # Protein_GI_number: 16080770 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Bacillus subtilis # 2 375 3 377 379 292 43.0 9e-79 MFGVSDDEKMLIDAVEELSNEVLEPQAAQTDESEEIPHEVIKALANMGVMGLNLPEEYGG PGISSVAMTHMVAAVAGGCGSTASIVTAHYLATDSVLIGGTEEQKKAYLPRAASGEVIGA FGLTEPGAGSNPAEMSTKAVRTENGWHLKGTKHFITNAGFADFVVVYAITDPEAGHRGIS AFLVDTAKVEGIVVGGHEKTMGLRGSPVYEISFDCELPADALLGEEGQGFKTAMKVLDRG RIEVAAMSIGISRKAMEHAVAWSKTRHINGKPIAALQAIAFKLADIHARYQQAFLVTMDA AHSRDTGEDFTIKSATAKLVASEAAAFITDEALQIHGGYGFTRDFPLERYARDVRIFRIY EGSSEIQRTIIGRQLTR >gi|294970426|gb|ADNU01000085.1| GENE 20 21589 - 22659 940 356 aa, chain - ## HITS:1 COG:yfdE KEGG:ns NR:ns ## COG: yfdE COG1804 # Protein_GI_number: 16130303 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 356 34 388 394 263 38.0 4e-70 MLAGPYATAMFADLGAEVIKIEIPGVGDDARHLGPFKDGESVYFSGLNRGKKSVEIDLKS DEDRARLDTLLERADVVVENFRPGVAQKLGISAEQLRAKRPELVYASISGYGQAGSFAKS PAYDTVVQARSGLMAATGTAESGPTRVGESIADVAAGNLAAFGIAAALYKQKVTGEGSHV DIPMYDVLVSMQPTNVAVYDSTGEAPVPSGNAHPVTAPFDTYQVSDGLIVIAVANDRLFA HLAETLERPELATDERFLTDPKRKANEEELRTEIEAALGSHTVDSALELLGSNGIPCSAV LDLKQSLESDLGRERDLIRTDERTGHRYAGHPLLFDGERPAAELPVPRLGEHNDEI >gi|294970426|gb|ADNU01000085.1| GENE 21 22785 - 23009 198 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396701|ref|ZP_06806847.1| ## NR: gi|295396701|ref|ZP_06806847.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 74 1 74 74 80 100.0 3e-14 MLVTLLWILTACALAFVSVLYMAVCLAICLVSLAFVRLSPWNAWWSNRSMIADVTTLMIL AGVVLTLALTVPGV >gi|294970426|gb|ADNU01000085.1| GENE 22 23107 - 24639 1378 510 aa, chain - ## HITS:1 COG:Cgl0838 KEGG:ns NR:ns ## COG: Cgl0838 COG0138 # Protein_GI_number: 19552088 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Corynebacterium glutamicum # 3 510 4 520 520 628 65.0 1e-180 MSEQRPIRRALISVFDKTGLEEFAQSLASAGVDIVSTGSTASTIAQAGVTVTKVEELTNF PECLDGRVKTLHPRVHAGILADTRNPDHMTQLADLNIEAFDLVVVNLYPFSETVASGAGY DDCIEKIDIGGPSMVRAAAKNHASVAIVVDPVDYSSVVEAVQGGGFTLEDRTAFAAKAFA HTAAYDVAVASWFASHSETPEFFGATGQLKSSLRYGENPHQEARVYATGGGLASAKQLHG KEMSYNNYQDTDAAVRTAYDFDEPAVAIIKHANPCGVAVGSTIEEAHTRAHECDSVSAFG GVIATNRPVTVALAEQIAPIFTEVVAAPSFEEGAAEVLQKKKNIRLLELGDVSFAPTEFR SISGGILVQERDVYQAPGDKPDNWTLATGEPADDATLADLVFAWRAVRSVKSNAILLAKD GASVGIGMGQVNRVDSARLAVSRAGEERARGSVVASDAFFPFADGLEVLIEAGVRAVVQP GGSIRDEEVIEAARKAGLTLYLTGTRHFFH >gi|294970426|gb|ADNU01000085.1| GENE 23 24632 - 25246 321 204 aa, chain - ## HITS:1 COG:Cgl0837 KEGG:ns NR:ns ## COG: Cgl0837 COG0299 # Protein_GI_number: 19552087 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Corynebacterium glutamicum # 3 180 9 183 197 191 57.0 5e-49 MRILLLASGSGTLTQAVLDAAGPYNVVAVGSDLPDAPVLQRAEQAGVDAFSVDFSSYADR AEWNRALADAVASYQPDWIVSAGLMRILGPEFVSRFAGTIINTHPALLPSFPGAHAVRDA LAHGVQVTGTTIHLIDEGVDTGPIIRQFPIDIRPTDTEETLHERIKEVERAQLVRLLSDL ATHTLTLNGRRVTLTPAESESSRV >gi|294970426|gb|ADNU01000085.1| GENE 24 25307 - 25741 378 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396704|ref|ZP_06806850.1| ## NR: gi|295396704|ref|ZP_06806850.1| F0F1 ATP synthase [Brevibacterium mcbrellneri ATCC 49030] F0F1 ATP synthase [Brevibacterium mcbrellneri ATCC 49030] # 1 144 1 144 144 273 100.0 3e-72 MPPKNETTENNAIGPDEKKRRRLGYTFLALCALSFMFSFYRLPFSLLAGVFSIGALIWGI RLFIACVKTKGPAAMLVFSVIGVVASVMSILAAAGTLVLYPIQKSLEECTTSAITQEASV ACQTEYKKGVEELYEQITGQPLPS >gi|294970426|gb|ADNU01000085.1| GENE 25 25730 - 26875 628 381 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396705|ref|ZP_06806851.1| ## NR: gi|295396705|ref|ZP_06806851.1| hypothetical protein HMPREF0183_2349 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2349 [Brevibacterium mcbrellneri ATCC 49030] # 1 381 1 381 381 557 100.0 1e-157 MGLGALAGVRVLVVFVLSALGLSFVMWLVAVAKMLPIATIPDWATRGALAAFGFPFEQAD FALSLPPTLLSLVIAWQMYRAGKSLRAEDSVSSEDLLKTQLLRLTGLSLSVFLVIAVALV ASGAPITGSAVVRSIILLVIAPAWGIRIGAEHVARWCDDRLSFAWGDAVDGSVALVARLL FALVIAAHIVFAVAVWRNFSAGAEVVSSYSAPVVAAVGLGIVQAMFAPTVWAATLTWVTG FPLQLGGDIHASAMSGFEGPLPAIPTFSVIPHSPHPAGIALVAVPVIAVAMVIAFSDMAT VQNSVVAGTQAFFALVLTSLFFFGGIGPGGLQALGVVPWTFVVASAVWLIAGIGIGLGMK KLRDFYVSTSTSQGSDPQSAG >gi|294970426|gb|ADNU01000085.1| GENE 26 27026 - 28228 1066 400 aa, chain + ## HITS:1 COG:no KEGG:KRH_03710 NR:ns ## KEGG: KRH_03710 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 78 397 20 325 328 102 25.0 4e-20 MSSGNNFPPGMPPQPPRPPQHNGTPNNGSAPQTPMGTGPNQPPRPAPAPGYGNPQAGPQK KKSSKAPLIISLAAVAGVILLVVAGIIVVNVVNKQQHSPQALAQSYVDAVNAGDMKKANE IAKVRVPKGAREELLDPRFIESSPDKIQDVTVENVERRGDTAQIGLSYTISGQEHSVKLH AEKKGKKGLFFDDWQMQGPQVQPVTLESPSDKLKVNGEELNVEPGATVFAVFPGTYEVES PESKFLTGDKQSISLGFLSEEDKDEPQEVRLRTDVKDELNKEVENLINKKLDECVKSGNF APKGCPFSVDTTSESQGVKIKDDVKDGDVHWKLEKRPKIRVSYSGALGNGVYYTNEEGEA SFTADSKRAGKNAWKSVNNMKFKMAGKVFIEGDSVKIEDY >gi|294970426|gb|ADNU01000085.1| GENE 27 28287 - 29687 946 466 aa, chain - ## HITS:1 COG:AGl854 KEGG:ns NR:ns ## COG: AGl854 COG0154 # Protein_GI_number: 15890542 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 452 4 449 465 338 43.0 1e-92 MLADLSAQEATAGYANGEFSPVDVLDAVAERIAACEPTINALWDNATADGPTAERTRQAA QASAERWRRGEALSALDGVMVTVKENIARAGVAMPSGTQPGSRIPEKDNAPIVDRLEEAG AVIVGSTVMPDWGMLSSGVSSLHGITRSPINPDLTTGGSSSGAGAATVAGYGPIHIGSDI GGSIRLPGTWLGLATLKPSFGRVPLSVPYQGRCAGPLARRTSDVIAAMEVIGRSDARDYS QLPPFEGAYQTSFDPASVRVAVHVDAGCGMDVDPQVAEVVRGAARAFETAGAQVEEIEPF MDDELLSLIDLFWRVRSYNDLMKLSEEDRARVLPYVVQWCEVGADVSGPELMDAYNSIHR MRKRTVSATEPYDLVLSPVAPVAAFPAEWPMPFNDPTQSMGHTSFTVPYNMSEQPASTVH AGYTDDGRTVGVQVAGRRFNDPFVLSASLWLEQALNVELPARTVGV >gi|294970426|gb|ADNU01000085.1| GENE 28 29775 - 31538 608 587 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 314 578 2 267 329 238 46 4e-62 MSELLHVKDLRIATDTTELVQPLSLDLAPGERVGLIGESGSGKSLTASAIMGLLPDELHA SGTIELQGHAGNLLTLSDARMSKLRGKDFSMVFQEPMSALNPLMRVGDQVAEVMKLHGNT TNLRDKVIDLLTQVDLPDPQAAAKAYPHQLSGGQRQRVVIAIAMANSPRLLICDEPTTAL DVTVQSGILDLIGHSVQKNNTGLLFITHDLAVVARVCEHVMVMYKGELVERGTVTDVFTN PQHEYTRGLLAASDLSATDENGRLFTIQTAHNYRLEEEHDAARETTRAAEGTEVAEDTEV GDTSVGGSVKVAGTSGKENPGTVVQIRDLKKDYERKSGRLFAPPHKVHALKGIDLTIQPG QRFGIVGESGSGKSTLLKILSGLETASSGKVTVGDYDVTAGAEADIRKVREDLQIVFQDP FASLDPRMKVREIVAEPLIAMGVPANERVNRVREMLIAVGLDETAENRYPHQFSGGQRQR ISIARALVCRPQILVADEPVSALDVSVRAQVLNLLTDLVEEYGLTLIFVSHDLSVVRYLC SDVAVMKSGEIVETGTVDQIYEAPSHPYTQKLVAATPQLEDALSHHA >gi|294970426|gb|ADNU01000085.1| GENE 29 31538 - 32362 630 274 aa, chain - ## HITS:1 COG:mlr1189 KEGG:ns NR:ns ## COG: mlr1189 COG1173 # Protein_GI_number: 13471268 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mesorhizobium loti # 4 269 18 284 289 235 50.0 6e-62 MNKRIFSHMSLIVGLVFVALIIITALISFIWTPYSPNHMDARLSGSTPEHWLGTDQYGRD TFTWVMMGARITLYVGAVAVGIAVFIGVPLGILAGMTNIGWLSSLIMRTNDLLLAFPALL LAMIFAAALGPGTLPAMIAVGIASIPGFARVARSGTLQVMSREFIMAAKSANRSAFAIAR THVLPNIGGMVIVQCSVAFALAILAEAGLSFLGLGTQAQTPSWGRMLYDAQQHLESHPGL AIWPGIAIAIAVLGFNLLGDGLRDRLDPKLKGRS >gi|294970426|gb|ADNU01000085.1| GENE 30 32362 - 33309 775 315 aa, chain - ## HITS:1 COG:Cgl2269 KEGG:ns NR:ns ## COG: Cgl2269 COG0601 # Protein_GI_number: 19553519 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 9 311 9 307 322 285 60.0 1e-76 MTSYFLRRLLQFILTAAVASVVVFALMQILPGNAAQVALGTSATPEAVAALEKQYGLDRP IVVQYFDWIGHVLIGDFGTSYVTGAPIAPVIANSIQVTLIVVLASMVVALAIAIPLGTLA AVNHKNMFGSLISGASQIGVAIPNFLAGILLVMLFSLQLGWFPSSGWKAPAEGFGEFLVR LVLPVFALALVQAAILTRYVRSAVLEVMGEDFLRTARAKGQTKGRALMKHGLRNAAIPVV TVAGVQLATLLIGAVVIEQVFVIPGMGSELVRAVSNRDLIAVQGIVLVLVVLVLALNTII DLLYPILDPRVRRAA >gi|294970426|gb|ADNU01000085.1| GENE 31 33315 - 34820 1495 501 aa, chain - ## HITS:1 COG:Cgl2268 KEGG:ns NR:ns ## COG: Cgl2268 COG0747 # Protein_GI_number: 19553518 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 13 499 14 495 503 422 45.0 1e-118 MKKRFGLALVAAASSLALVGCNAGASSSGSSEARTDMVVAHTAEPANLDFTTSAGAAVPQ ALMENVYESLVRIDQEGQIQPALAESWDLSEDRKTYTFKLRKGVKFSSGADFTAEDVKFS YERVKSDEWKNALKSKMDVVDSINVVDDATVEITLSHPSNRWLFDLASLVGAIFDQDGVS DLANKAVGTGPFTVDTFTRGQQIVFASRDDYWGEAPKLDKVTFKYFKDPVASANALKSGE VDVLANLQAPDLLSSFEKEGDKFKVVEGTSNGEVLLALNNADGVFKDKKVREAVMYALDE QAIIDTAWSGHGTLIGSMVPPTDPYYEDLNDVWPHDVEKAKKLVEEAGVKDQTVKFTVPN LPYATASANVVVSQLEAVGLKAKVETQEFPAVWLDKTFTNHEYDMSIINHIEARDILTVF GEGYYTGYDSKKISDIAAKADEGSEEEYTEGMKQVARTITEDAAAGFLFLFPNLVVTNSK VTGVAENQVSDAFRIADLGWE >gi|294970426|gb|ADNU01000085.1| GENE 32 34895 - 35104 98 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRNWFTCRHAVSSHVTTHIPGRRCFWGVRGRHQTPLTLSASSPHERLRRAPAARILTNT TNSSQATAA >gi|294970426|gb|ADNU01000085.1| GENE 33 35026 - 35451 209 141 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396712|ref|ZP_06806858.1| ## NR: gi|295396712|ref|ZP_06806858.1| hypothetical protein HMPREF0183_2356 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2356 [Brevibacterium mcbrellneri ATCC 49030] # 1 131 1 131 141 247 100.0 2e-64 MINSSASVGQQRTSQKESLTAKSKKNSFGGLLVAGVVSYIIAGCIVVFPIELMLPILDAP LAPLLCKEPGAELISTSDEWTNSEGETSVSVTRFCVSEAQGVQHLTFMDRLPVRLGQAAV AWLLFVVLVKMRAAGARRRRS >gi|294970426|gb|ADNU01000085.1| GENE 34 35444 - 36082 370 212 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396713|ref|ZP_06806859.1| ## NR: gi|295396713|ref|ZP_06806859.1| hypothetical protein HMPREF0183_2357 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2357 [Brevibacterium mcbrellneri ATCC 49030] # 1 212 9 220 220 407 99.0 1e-112 MARFIRSIVVVTLVALATSACAIGVISEEEFAQQMFERGGGIAAPRVEQALHDFAQHGGY DDVEKTQLRRISFQGSNFSFVGDVLNAQNPVENDWVFSQPSRKASPRENSTDSYFLAQDI PTIFRKDPATLIRNMRDEVDGAEITGFDLMVRVGNETIVADAQGAAPGGEVQDAPVPQRT ENVSLHGTVKGPRIGLVSFEFDPQTGEVISRD >gi|294970426|gb|ADNU01000085.1| GENE 35 36221 - 36811 462 196 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803493|ref|NP_289526.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli O157:H7 EDL933] # 3 190 3 191 197 182 53 3e-45 MTRFVLATHNAGKKVELQAILSQVIPTAEVVTAGELGLADVVEDELTFEENALIKARAVA EETGLPAIADDSGLVVDVLGSAPGILSARWAGEHGDDRANLELLLAQLSDIPDRGRGARF VCAAAYVNAGAEVVCTGEMRGTILREPVGDGGFGYDPIFQPDGENVSAAQLSSEEKNAIS HRGKALRKLVAEIAPV >gi|294970426|gb|ADNU01000085.1| GENE 36 36820 - 37566 650 248 aa, chain - ## HITS:1 COG:PA5334 KEGG:ns NR:ns ## COG: PA5334 COG0689 # Protein_GI_number: 15600527 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Pseudomonas aeruginosa # 2 240 3 239 239 280 64.0 2e-75 MRFDGRQANELREVKITRGWLDHAEGSVLVEFGRTRVLCAASLTEGVPRWMKGEGRGWAT AEYAMLPRATHTRSSRESVKGKIGGRTHEISRLIGRSLRAVLDLSKLGENTLQVDCDVLQ ADGGTRTAAITGAYVALVDAVAKGKELGWIPKNAEVLKDSVAAISVGIVDGTPVLDLPYE EDSTAETDMNVVMTGSGAFVEVQGTAEGAPFDRAELGSLLDLAEHGCAELARIQASALAQ DLVRGSDQ >gi|294970426|gb|ADNU01000085.1| GENE 37 37645 - 38469 632 274 aa, chain - ## HITS:1 COG:ML1173 KEGG:ns NR:ns ## COG: ML1173 COG1234 # Protein_GI_number: 15827592 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Mycobacterium leprae # 6 267 5 257 260 170 43.0 3e-42 MTDFSITAVGISGSYPGPASSASCYVVSAHDGEKTTNIVLDLGSGALGPLQTVLTHTQID AVFLSHLHPDHCLDVTGLYVLRTYDPEFFFADTPLPKLPVYGPGGSEDRLQAAHRTPAGL AAGPGKNADESTLNSAFEFKDLTPGSRHTIGPLTVIPHLVEHPVETYALRIEHANGAVLT YSGDSDACDGLVAAAHGADLFVCEAAFEEGRDTVRGIHLTGKRAGEVAQAASVKRLMLTH IPPWTSEDKVRTEATGAFGSTPEIAAPLTTYTVP >gi|294970426|gb|ADNU01000085.1| GENE 38 38472 - 39077 519 201 aa, chain - ## HITS:1 COG:no KEGG:AAur_2573 NR:ns ## KEGG: AAur_2573 # Name: not_defined # Def: hypothetical protein # Organism: A.aurescens # Pathway: not_defined # 15 181 16 183 188 100 41.0 3e-20 MKITPSARFTAIVEVEPVERRLLAGLFSDAAELLGGDDAETEADELAILVGMSSGERPTD PAVLRLLPDVDAEDSERATEFRRLTERDIRESKLANFRTALFTLDRSGRAELTEEQARAW ATALGDVRLILATRLGIATESDLENLLETLDEQPESTVMTVNVYELLTWAQDRITTILLE ALPDLGEDDEAGGNDLGNEGP >gi|294970426|gb|ADNU01000085.1| GENE 39 39074 - 39355 317 93 aa, chain - ## HITS:1 COG:MT1373 KEGG:ns NR:ns ## COG: MT1373 COG2127 # Protein_GI_number: 15840786 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 3 90 12 99 101 100 56.0 8e-22 MSTLAEPEVDEVVATDSPWVTIVFNDPVNLMSYVTYVFRSYFGYSPAKANKLMMEVHNNG KSVVATGTREEMERDTAAMHGFGLWATCKKADA >gi|294970426|gb|ADNU01000085.1| GENE 40 39431 - 40747 1351 438 aa, chain + ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 5 435 10 439 446 386 54.0 1e-107 MSDLTRQSTALLTDQYELTMVQAALESGRAERICLFEVFGRRLPPGRRYGVVAGTGRFLE ALENFTFGPDELAFLKSANILDDTTLDWLESYTFTGNIRGYAEGDMYFPHSPILTVEATF AQAVVLETLILSIMNYDTAVASAASRMSRAAGNRPCADMGSRRTQEYAAVGAARAAVIAG FASTSNLEAGRRYGLRTIGTAAHAFTLLHDTEREAFDAQVKALGKDTVLLLDTYDVDEAL KTAIEVAGTELGGVRIDSGDLGIQATEVREKLDALGATNTKITVTSDLDEYAIASLRATP TDSYGVGTRLVTGSGSPTANLVYKLVARSDNGEDWVSVEKKSAGKGSHGGFKQAVRALEG GVATEEAIGVPTLPEEVSSGRPLTVDLVVDGQIVDGFTGPEGVERARAHYHDCIRELPRT AHRLQDGEPAIPTVYYNA >gi|294970426|gb|ADNU01000085.1| GENE 41 40813 - 41895 1000 360 aa, chain - ## HITS:1 COG:Cgl2747 KEGG:ns NR:ns ## COG: Cgl2747 COG1064 # Protein_GI_number: 19553997 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Corynebacterium glutamicum # 23 360 7 345 345 469 67.0 1e-132 MHYVCLAENLRSIATKELAPMSETMNAAVVNEFGKDLEVKQVDVPKPGPYQALVKNISSG VCHTDLHAAHGDWPVKPEPPFIPGHEGVGKVVAVGDFVTRVKEGDLVGNAWLWSACGECE YCETGWETLCEKQENGGYSVDGSFGEYMLVDSRYCALIPEGADPYEIAPVLCAGVTVYKG LKETEVKPGEWVVISGVGGLGHIAVQYAVAMGMRVAAVDIADDKLQLAKKHGAEVVVNAF ANDPVPAIQEAVGGSHGVLVTAVHPDAFGQAIGMTRRGGTIVFNGLPPGEFPAPIFDIVL KGLTIRGSIVGTRRDMEEALDFYARGLIHPTFTKRPLGDINAVFDEMVHGKIDGRVVVEY >gi|294970426|gb|ADNU01000085.1| GENE 42 41950 - 43728 1335 592 aa, chain - ## HITS:1 COG:Cgl1868 KEGG:ns NR:ns ## COG: Cgl1868 COG1061 # Protein_GI_number: 19553118 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 28 587 2 570 570 588 56.0 1e-167 MNTGRVPGTSAAEHLSPAFPERAAWGTAGKLRAWQAEALEQYFRNEPRDFLAVATPGAGK TTFALRLASELLAQRKVDRVTVVAPTEHLKVQWAAAAGRVGIKLDPNFKNSQGRSAPGFH GVAVTYAQVAAKPVLHQNRTEKYRTLVILDEIHHAGDALSWGDAVRDAFEPARRRLALTG TPFRSDTSAIPFVTYVPDDEGIRTSQADYSYGYSRALGDGVVRPVIFMTYSGNMRWRTKA GDEMEAILGADATKDVHAQAWRTALNPKGEWIPAVLRAADRRLTEVRRTVPDAGGLVIAT DQQVARAYAKQLKEIAGEDVTVVLSDEAGASDRIEEFQNSDRRWMVAVRMVSEGVDVPRL AVGVYATSSATPLFFAQAVGRFVRARKRGETASIFLPSVPVLLALANNLETERDHALDVR RSEDDEEQGLLDDQALNEANRNESASGDLATGTYEALSAEASFDRVLYDGGEFGAGGAVG SDDELDFIGLPGLLEPEQVSHLLRARQSEQSKRKGRVTPTEDPDELEHKAMKEERNKLQS LVGAWARRTGKPHGSIHIELRRACGGPAVAQASREQIQDRIKTLQRWFVGRS >gi|294970426|gb|ADNU01000085.1| GENE 43 43725 - 43994 246 89 aa, chain - ## HITS:1 COG:no KEGG:KRH_09940 NR:ns ## KEGG: KRH_09940 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 7 85 32 110 114 105 63.0 4e-22 MTETYPSTGGTATLDRELQEQLTEPGDHERFSHYAPKAKIMESMVTGTPLVALCGKVWVP SRDPQRFPVCPLCKEIYESMPEGQEPDDE >gi|294970426|gb|ADNU01000085.1| GENE 44 43993 - 44490 395 165 aa, chain + ## HITS:1 COG:no KEGG:Bfae_06570 NR:ns ## KEGG: Bfae_06570 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 11 146 15 150 170 100 41.0 3e-20 MPPILSSDFVDDYRRLSDSIASGVAVVTVGEGSRLTGVTVDSFLDVSWDPPTMLVSVLTL SRIMDVLEPAPMFTLSVLNSDQEDIAAWLGASGQPNYGLLNEISTVEGERGPAHIAGACA FFEIEVVQRHVVATHTLFSGPVVAQGGSPDTPSLVRRNRVYGTVR Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:19:59 2011 Seq name: gi|294970424|gb|ADNU01000086.1| Brevibacterium mcbrellneri ATCC 49030 contig00131, whole genome shotgun sequence Length of sequence - 541 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 453 254 ## gi|295396725|ref|ZP_06806870.1| conserved hypothetical protein Predicted protein(s) >gi|294970424|gb|ADNU01000086.1| GENE 1 3 - 453 254 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396725|ref|ZP_06806870.1| ## NR: gi|295396725|ref|ZP_06806870.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 150 21 170 171 293 100.0 3e-78 MTAVVLMPKLWALAKAGVVGFDRVLYTAGRVGRAGVCIPVFDDMLTNKRVDVPWKTYRRH VNEILAMLMTPETRVENARRNRGVSYWVNDDGTATLSLTGPVLEMEAFYQRVRGTARAIL ANHIEAFSATLTDEQQALFITENNGETTEV Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:20:08 2011 Seq name: gi|294970420|gb|ADNU01000087.1| Brevibacterium mcbrellneri ATCC 49030 contig00133, whole genome shotgun sequence Length of sequence - 1862 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 130 - 471 296 ## gi|295396727|ref|ZP_06806871.1| hydrogen cyanide synthase HcnC 2 2 Tu 1 . + CDS 606 - 803 61 ## + Term 900 - 931 -1.0 3 3 Op 1 . - CDS 800 - 1594 415 ## COG2801 Transposase and inactivated derivatives 4 3 Op 2 . - CDS 1660 - 1842 86 ## DIP2085 putative insertion element Predicted protein(s) >gi|294970420|gb|ADNU01000087.1| GENE 1 130 - 471 296 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396727|ref|ZP_06806871.1| ## NR: gi|295396727|ref|ZP_06806871.1| hydrogen cyanide synthase HcnC [Brevibacterium mcbrellneri ATCC 49030] hydrogen cyanide synthase HcnC [Brevibacterium mcbrellneri ATCC 49030] # 1 113 1 113 113 201 100.0 2e-50 MFKGRVCRLCDKHVRWFSLHSKFIFLEGCRVTGRFWAENVNKTNKSGVYSTLMFEGCRVN GFRVATVGGFDCIHLRSGARGGRACSGHPAARGGRCVSIISSGEKLKGKGRGV >gi|294970420|gb|ADNU01000087.1| GENE 2 606 - 803 61 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRDFLCGEVRAIPPSYPPQDNGFGLAVLGNWPILGRKREQNEQNRRLLNAVDLDLPLKV GLVLF >gi|294970420|gb|ADNU01000087.1| GENE 3 800 - 1594 415 264 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 258 22 278 283 231 44.0 2e-60 MARSTFFYHQKRLTSPDKHAVLKTAIRHSFESNKHRYGYRRVWRDLRNKGWVVNHKLVYK LMDQMGLKAKIRRRRPYISYADTISRIAPNILDRNFTRDKPNTAWVSDITEFNIAGRKVY LCPVMDLFDRTIISHTVSTSAATTFAVASLKESITAQAPEPGWIIHTDQGFQFRHIAWRT LVEKHEGKVSMSRKGNCYDNAVIENFFSHLKTEMYHGETFNNIKEFTNAIDEYINWYNNQ RLQERLKGQTPMQYRNQTLQALTA >gi|294970420|gb|ADNU01000087.1| GENE 4 1660 - 1842 86 60 aa, chain - ## HITS:1 COG:no KEGG:DIP2085 NR:ns ## KEGG: DIP2085 # Name: not_defined # Def: putative insertion element # Organism: C.diphtheriae # Pathway: not_defined # 2 60 102 160 160 83 79.0 3e-15 MKWRKGGDESLKPRPIGRPRKSGKPKVLTEEDALRRENELLRAENAYLKKLRDLREQGHA Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:20:24 2011 Seq name: gi|294970415|gb|ADNU01000088.1| Brevibacterium mcbrellneri ATCC 49030 contig00134, whole genome shotgun sequence Length of sequence - 5463 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 73 - 132 3.0 1 1 Tu 1 . + CDS 381 - 1415 1041 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 2 2 Tu 1 . - CDS 1458 - 2981 1149 ## cg0233 hypothetical protein - Prom 3079 - 3138 1.8 3 3 Op 1 . + CDS 3082 - 4215 1230 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 4 3 Op 2 . + CDS 4269 - 5393 1273 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily + Term 5434 - 5462 1.0 Predicted protein(s) >gi|294970415|gb|ADNU01000088.1| GENE 1 381 - 1415 1041 344 aa, chain + ## HITS:1 COG:Cgl2258 KEGG:ns NR:ns ## COG: Cgl2258 COG2141 # Protein_GI_number: 19553508 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 18 340 4 324 326 440 69.0 1e-123 MSAPTADNSYQPNPDKTPLSLIDFATIFSGERPADSYARSVTLAQRAEELGYSRIWYAEH HNMSSIASAAPAVLISHVGAHTSRIRLGAGGVMLPNHSPLVVAEQFGTLAELYPNRIDLG LGRAPGTDQRTLLALRRDPSAADHFPSDVAELAGYLSDESRIHGINATPGQGTHVPLVIL GSSLFGANLAAQMGLPYSFASHFAPQALEEAVAHYRGNYQPSERFPEPYVIAAVNVTAAD TAEVAEEHAEHVRRGRVKAFLGRQAGRRLSDEEIDMLVESPQGKQIIAMLKYWAIGTGEE VRSYLTDFTQTARADELMISLQSPDTDSTMRSLEILADVWGISG >gi|294970415|gb|ADNU01000088.1| GENE 2 1458 - 2981 1149 507 aa, chain - ## HITS:1 COG:no KEGG:cg0233 NR:ns ## KEGG: cg0233 # Name: not_defined # Def: hypothetical protein # Organism: C.glutamicum_B # Pathway: not_defined # 3 499 1 493 495 664 64.0 0 MGMGDAISAQSYTPRQRTDYRKQLGHDLETFDAYLQDADFLARGTIGLELELNLVDENQQ PAPVNQQVLEAIDNPDFQTEIGSFNFELNHPVLSVEGAGLKNLENGLDARLLAARAGAKK CGARVASIGTLPTLTKEFLDAPEWITDENRYRALSNMVVQSRGELVHIDLSNRESFSAEF NDVAPEAACTSMQLHLQVAPNRFADAWNASQAIAGVQAALSANSPLFLGRKLWHESRVPV FEQSIDTRTPELVVQGVRPRVWFGERWITSIFDLFEENVRYFPPLLPESREDSGAPIMKG KAPALHYLNLHNGTVWRWNRPIYAPSDSGDGTAHVRVENRLLPAGPTATDMVADAAFYYG MVNYLSEQNRPVWSRMSFNEARANFYEGCRNGMFARVKWPTLGKIDVARLVRNHLLDRAR KGLEDLKVDPELIDYYLGIIDQRAATRQNGAVWQLRTLSAMNPSVSKPDTEARRAALARL VDLYIENQESGKPVHTWPVIEPEYRSN >gi|294970415|gb|ADNU01000088.1| GENE 3 3082 - 4215 1230 377 aa, chain + ## HITS:1 COG:DR2493 KEGG:ns NR:ns ## COG: DR2493 COG0624 # Protein_GI_number: 15807478 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Deinococcus radiodurans # 14 372 12 367 370 203 41.0 5e-52 MNFEHILQQSHDRLPQMIADIERVINIETPSSDKDAVKRGAQDFASLMDERLSATPELVE IDGVTHVRLRFGDGARKVILVNHQDTVWPHGTLDRLPFSNHDGVLRGPGVFDMITGAIMS VHATALLQENGTDLDGLTILVTGDEEVGSTTSADFIVNEAKGAAAAFVLEASQHGALKVE RKGSSIYTVNVHGKAAHAGLEPEKGINAGLELAHQMQVIAGFADAGAGTTVTPTVFSGGT TTNTVPAFATVNVDVRAKTVEEQERVDALMRGLTPSVQGARIELIGGINRPPMERNMAQG LFDRAVELAEKLGIETPTAVAVGGGSDGNFTAGAGVPTLDGLGAVGDGAHAEHEHALVDQ IAPRTALLAALIADQLA >gi|294970415|gb|ADNU01000088.1| GENE 4 4269 - 5393 1273 374 aa, chain + ## HITS:1 COG:BS_ytfD KEGG:ns NR:ns ## COG: BS_ytfD COG4948 # Protein_GI_number: 16080130 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Bacillus subtilis # 1 363 2 360 371 286 43.0 3e-77 MKLSSIRLHNVAVPLVTPFETSFMRETEKECYLIEATFDTDSGQVTGWGESVAMSAPLYS SEYVEGGIDVTRRWIAPILFDVENLRAERVAWHLRHIIGHQMAKAAMEMAVLDAQLQVAG LSFKDYLGGVTDTVPSGVSVGMQDSIPELLKVIGGYMEEGYARIKLKIKPGKDIEPVAAV RKEFGDDFLFQVDANAAYTLVDAAHLKKLDDYGLLLIEQPLGEADIRQHALLAKQMSTPM CLDESIVSAEAAADAISLGAADVINIKPGRVGGYLEAKKIHDLASAHGVAVWHGGMLELG IGRAANAAMASLPGFTLPGDISGSKRFFHEDITEEIVQHDGVVDVPTGPGFGVTVNRETL AKFTRDTIDITPQK Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:20:32 2011 Seq name: gi|294970412|gb|ADNU01000089.1| Brevibacterium mcbrellneri ATCC 49030 contig00136, whole genome shotgun sequence Length of sequence - 919 bp Number of predicted genes - 4, with homology - 2 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 95 99 ## + Prom 97 - 156 2.8 2 2 Tu 1 . + CDS 239 - 556 259 ## jk0094 transposase for IS3504a 3 3 Tu 1 . - CDS 472 - 735 172 ## 4 4 Tu 1 . + CDS 553 - 919 77 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|294970412|gb|ADNU01000089.1| GENE 1 3 - 95 99 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no KKQMARLLVEKAVLEEELELIKKDDSVIPG >gi|294970412|gb|ADNU01000089.1| GENE 2 239 - 556 259 105 aa, chain + ## HITS:1 COG:no KEGG:jk0094 NR:ns ## KEGG: jk0094 # Name: tnp3504a1 # Def: transposase for IS3504a # Organism: C.jeikeium # Pathway: not_defined # 1 105 1 105 105 159 92.0 4e-38 MPRKFDQDAKDRVVRLVEDRILAENMSMQAACQAVAPKLGVSWHTARQWTQQARRAGRIS EPMPEDLVAENVRLRRENQELRDTNELLKAASAFFASELDPKRRK >gi|294970412|gb|ADNU01000089.1| GENE 3 472 - 735 172 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHCTNAFNQHSVTKTTSTESTGFEWAITTRGDEPTNPAILQRLTDELDTETIPILINEPD HFRRFGSSSEAKKAEAAFSSSFVSRNS >gi|294970412|gb|ADNU01000089.1| GENE 4 553 - 919 77 122 aa, chain + ## HITS:1 COG:MT0413 KEGG:ns NR:ns ## COG: MT0413 COG2801 # Protein_GI_number: 15839786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 11 110 2 99 294 70 43.0 8e-13 MIRFIDEYRNRFCVEFICKTLKNSRVGGFITSRGYRPFKARGLSARRLRDAVLVERISTV HRDNYGVYGVRKMWHALRCDGIDIGREQTARLMRLAGVFGKSKGRVPRTTCKPNVPDLRP DL Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:20:46 2011 Seq name: gi|294970407|gb|ADNU01000090.1| Brevibacterium mcbrellneri ATCC 49030 contig00138, whole genome shotgun sequence Length of sequence - 4379 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 237 - 764 347 ## gi|295396739|ref|ZP_06806880.1| conserved hypothetical protein - Term 774 - 823 0.1 2 1 Op 2 . - CDS 854 - 1384 427 ## Noca_4331 membrane protein - Prom 1551 - 1610 1.9 + Prom 1358 - 1417 2.1 3 2 Tu 1 . + CDS 1439 - 2512 846 ## COG1814 Uncharacterized membrane protein + Term 2532 - 2594 20.1 - Term 2517 - 2582 22.5 4 3 Tu 1 . - CDS 2609 - 4321 2158 ## COG2234 Predicted aminopeptidases Predicted protein(s) >gi|294970407|gb|ADNU01000090.1| GENE 1 237 - 764 347 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396739|ref|ZP_06806880.1| ## NR: gi|295396739|ref|ZP_06806880.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 175 1 175 175 273 100.0 5e-72 MDSDDIMYELTHIRAELQSLRREVASLRRHLGDVDEARDTAEQSEAKGSDQHEREPRTHS ERCAPPAQIQEFLGDLMRDFPFTWGEDPRPSRRAGFSADPQGPPRPESHAGSQVESQAES HQDPRPCSYPGAAEIAKFISDALAERDRRGRGDHNADDDSDGAKGDADGFLEDSV >gi|294970407|gb|ADNU01000090.1| GENE 2 854 - 1384 427 176 aa, chain - ## HITS:1 COG:no KEGG:Noca_4331 NR:ns ## KEGG: Noca_4331 # Name: not_defined # Def: membrane protein # Organism: Nocardioides_JS614 # Pathway: not_defined # 27 172 1 146 148 119 48.0 4e-26 MSRVRRVTGSTIWLIRMSGESVILGSVTPKKLFSLFAFAEAVTWTLLIAGMVLKYTGVTE VGVRIGGGIHGFVFLAYCVVTVLVGTSQRWKLGRTLLGLVSAVVPYATIPFEINANKAGV LDGDWELPHNRQARNWFERLCGWAITHPFLAVLVGFVGVAILFTVLLILGPPIPQN >gi|294970407|gb|ADNU01000090.1| GENE 3 1439 - 2512 846 357 aa, chain + ## HITS:1 COG:Cgl2230 KEGG:ns NR:ns ## COG: Cgl2230 COG1814 # Protein_GI_number: 19553480 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 3 355 7 356 357 361 56.0 1e-99 MTTQAQDIRRWKKHLANERVEERVYRSLAQKRQGEEREILLELADAERRHQDHWIARLGE HANDTVRPSLNIQLLALMARMFGSIFVLALAQQAETRSPYDSESGATAQMAADERVHAEV IRGLAAKSRARMSGNFRAAIFGANDGLVSNVALVLGVGAAGVSPQIVLLTGISGLLAGAL SMAAGEYISVSSQRELIEAGNPHPHAADDLTRLDINANELALVFRARGMDAQESELAART AISKANDQRNPTFLPKTITEQDTEDLGTALGAATSSFVFFATGAIIPILPYVFGMEGIPA MAVSAVLVGIALMFTGGAVGVLSGKAPTPRAFRQLAIGYGAALITILLGMLFGTVTG >gi|294970407|gb|ADNU01000090.1| GENE 4 2609 - 4321 2158 570 aa, chain - ## HITS:1 COG:Rv0418 KEGG:ns NR:ns ## COG: Rv0418 COG2234 # Protein_GI_number: 15607559 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Mycobacterium tuberculosis H37Rv # 38 457 52 458 500 250 39.0 6e-66 MKRFLYGAGASVAALALGASVASPAFAAPETHFNTMGVTGEDTMAYLKDISDITWKHKDE EFRALGTKGYEEASEYVEKVLTDLGYEVERQEFTVPSQKFGKIELTVDGENVKAKSLSYT EGTKDPITDAALVLPVDDKYGDKAGGELGCSADDFDETVKDAIVLVQRGECAFSDKVKNA SEKGAAGVVIYNNTEGDLNGTLGERFEGSAPAVSVDQATGDSLRDKATAENADVKASLTL ETQFTESKTWNILAETKAGDPNNVHMLGAHLDSVPEGPGINDNGSGVAGVLTVAKGLANQ EREVDNKVRIGIWGAEEVGLVGSTYYVESLTDEERGKITSYLNYDMIGSNNYAVSTLDAN GDYRDIPDGVKVPKGSVELEKLYTDYFDSVDQPYIGAEFSGRSDYQAFMDAGIPVGGVNS GADEVKTEEEAKLFGGEVGKQLDTNYHKITDSLENVNTDSVNAIVPSMANATYQLAYTDE HKAEDAQKPEEEAPEEEAPGEDKPKEEDPKDEKPEGDAKDDSSDAKEDDAKAGDSNLPRT GSEMMPWVAGAAVLVAVGSATVVLTRRKRQ Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:21:03 2011 Seq name: gi|294970398|gb|ADNU01000091.1| Brevibacterium mcbrellneri ATCC 49030 contig00142, whole genome shotgun sequence Length of sequence - 13657 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 5, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 116 - 502 247 ## gi|295396744|ref|ZP_06806884.1| hypothetical protein HMPREF0183_2382 + Term 551 - 594 10.0 2 2 Tu 1 . + CDS 814 - 1896 966 ## RHA1_ro03846 isopenicillin-N N-acyltransferase (EC:2.3.1.164) 3 3 Op 1 . - CDS 1915 - 2883 767 ## gi|295396746|ref|ZP_06806886.1| hypothetical protein HMPREF0183_2384 4 3 Op 2 . - CDS 2910 - 3683 511 ## MTES_2341 transcriptional regulator - Prom 3726 - 3785 3.6 + Prom 3680 - 3739 1.5 5 4 Op 1 . + CDS 3768 - 6647 2724 ## COG2409 Predicted drug exporters of the RND superfamily 6 4 Op 2 . + CDS 6647 - 9280 2909 ## COG1511 Predicted membrane protein 7 5 Op 1 . - CDS 9388 - 11331 1187 ## AAur_0841 hypothetical protein 8 5 Op 2 . - CDS 11331 - 12776 1195 ## COG1316 Transcriptional regulator + TRNA 13564 - 13652 68.2 # Ser GCT 0 0 Predicted protein(s) >gi|294970398|gb|ADNU01000091.1| GENE 1 116 - 502 247 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295396744|ref|ZP_06806884.1| ## NR: gi|295396744|ref|ZP_06806884.1| hypothetical protein HMPREF0183_2382 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2382 [Brevibacterium mcbrellneri ATCC 49030] # 1 128 7 134 134 251 100.0 2e-65 MCVWVGRVRWFSLHSKFIFLEGCRVTGRFWPKNVNKTNKKGVYSTILFEGCRVNGFWVAT VGRFDWSHLRFGVEVAAPVRGTLLAVVVGALLSSVRERSSRVKVRGVNDDATHEQNDVVT HLLAGSCD >gi|294970398|gb|ADNU01000091.1| GENE 2 814 - 1896 966 360 aa, chain + ## HITS:1 COG:no KEGG:RHA1_ro03846 NR:ns ## KEGG: RHA1_ro03846 # Name: not_defined # Def: isopenicillin-N N-acyltransferase (EC:2.3.1.164) # Organism: Rhodococcus_RHA1 # Pathway: Penicillin and cephalosporin biosynthesis [PATH:rha00311]; Metabolic pathways [PATH:rha01100]; Biosynthesis of secondary metabolites [PATH:rha01110] # 14 345 11 347 369 195 37.0 3e-48 MKKNQPHLVRTETIYVDGTEPRQRGMARASQIAAHIRATVRAYSELYSAQGISETDATAA ARASMDAIRNWDPDQHLELLGVAAGSGITAADLGLIVGRTEILTLAKEQPQECSTVTFQQ PGRTMSAQTWDWKPELVRNWHFHRVAALPGGQSYAGFAEHGMTGKIGLNSAGLGVHLNIL KNTDDASGGVPIHAVLARILSTASSVDEAISIAKDAPTSASSIITVLDRDRAVNMEINPH QVALNSRDGWALRTNHFACPSQADGAQLLTPDSNTHDRMDYLEAATTSAGEPHDLDDMLQ VLCSPLEDGLVSVLPDPAAPNKGATLVTVRIDPANRRIDLSPGAPQFASDMTVNFTVPQN >gi|294970398|gb|ADNU01000091.1| GENE 3 1915 - 2883 767 322 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396746|ref|ZP_06806886.1| ## NR: gi|295396746|ref|ZP_06806886.1| hypothetical protein HMPREF0183_2384 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2384 [Brevibacterium mcbrellneri ATCC 49030] # 1 322 1 322 322 619 100.0 1e-176 MSVHANEFSAFMSSMPLRLTSFIESDLPESVTLENDETREFRKDLSPASLPWIEAFANSA LASPAVAVAPENQKFTENLMRYVGEVFLRGLGGAWDYDESGEVGEGFPFIRPDSPDGDCE GEPISMIGLVMTALQARNGQVFVSRYAQELEKFGEDGPRRSCSAVDDAADGGAEAPLEEE ERSFLATFLPTVESGVAAWVQDQATPHEWTFGTEGLLKLSKQLVARYSTVDEMLADRSDF YIQGALRFAGETFRREGKGAWRYGTRFDTDDPRQKQPFVHFSQIEVDVVPWAILTSAFKD PHAPSEALGALRSQVDGAGAGA >gi|294970398|gb|ADNU01000091.1| GENE 4 2910 - 3683 511 257 aa, chain - ## HITS:1 COG:no KEGG:MTES_2341 NR:ns ## KEGG: MTES_2341 # Name: not_defined # Def: transcriptional regulator # Organism: M.testaceum # Pathway: not_defined # 6 219 3 203 208 82 31.0 2e-14 MTLHPDVAPTASRQRTRNRLLGAAVIAFARRGIVSTPIEELCEEAGMTRGAFYSNFTSID ELVVNLIDCAVEHTIAGIRGIIATTEDTCSTDRATNTSDPHCRFTNLHQSAKTAFATQRL GWTTSVAWTITEAEIELYSIRNPDVRERYLELQNAQVRAVGVEVEQLLSRHGARTTIPTQ TAIQHLAATDIRTARQSIPPRAVELAPTPDASELIAQIMSQPGAEFDTSKLPEHSLLHPV ERELGPVLDLLSMMVEF >gi|294970398|gb|ADNU01000091.1| GENE 5 3768 - 6647 2724 959 aa, chain + ## HITS:1 COG:BS_ydfJ KEGG:ns NR:ns ## COG: BS_ydfJ COG2409 # Protein_GI_number: 16077610 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Bacillus subtilis # 18 784 1 719 724 451 37.0 1e-126 MVEPVWLNLPHATESESVSSFLYGLGRATYRHRLVTSGVWLLIIVLMGAFVGLFANTFDD KFELPGAESQEALDSMRLTFPQASGARADIIVVSANNESVDQGIYKKEIENAVERLEDVE NVEGVTSPFSEFVTGNINDDKNAAIINVSYDSPVEELTDEDRETLQKQADELRDALPQGS TVSAGGEVFKTTSVHISWVEGIGVAIAFCVLLFTFGSALAAGVPLVTAVVGVIIGLLGIV GLTAFSTVSSTAPMLALMLGLAVGIDYALFIISRARSFMLEGHDAEESVARANATAGSAV VFAGITVIIALVGLSLTGMPFLAVMGFGAAATVAVAVGVALTLVPAILGFIGERINPLRK AQKKAQKKAAKNQAKNGKPAEQTEVSTSSAEGYNLAQKETFATKFYRGWVTAATKFPLIT IIVVVGALSVFAIPASKLQLALPDNGGQPEGTPARTTFDLIDKEFGPGHNGPLVMTAEIV TSDDPLDDVEKIEDEIKKIPGVKKVILAVPNENADTAMFQIIPETGPSDPETEKIVEELR DMEPKIKEKYGYQTAVTGATAVAIDVSAQLGRALVPFGLFVVGLSLVLLMMVFRSLWVPI KATAGFLLSVIAGFGVVELVFIEGHGATALNLDHVGPVISFLPIILMGILFGLAMDYEVF LVSGMREAYAHGTPAREAVKKGFMSSASVVTAAAIIMFCVFAAFVPTGEAIIKSIALGLA VGIAVDAFLVRMTLVPAVMTLLGEHAWWLPKWLERILPHFDVEGEGLYHQVKLQNWPETD TEYRIYGENLSVYGTGGPLFEDVNVALQPGEVLAVSGRGRTALLLALAGRAPLEEGELKV GEYVLPEQANKVRRSTPFLTLRHSEDSLVPKPEYIRGFIKSLPPVVVIDHADAPNDHATA KAVKNLIDVAAARGSAVILGLHNPDVDWMIPNGMDYTLLNLDDHNRTEHVPAHAFGGTH >gi|294970398|gb|ADNU01000091.1| GENE 6 6647 - 9280 2909 877 aa, chain + ## HITS:1 COG:lin2460 KEGG:ns NR:ns ## COG: lin2460 COG1511 # Protein_GI_number: 16801522 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 12 810 15 843 927 189 24.0 2e-47 MPILERAFSGKRVTLWSLVGLILVPVLIAGGFVLATRGADTRFGEIKAAIVNNDDGTEID GKRVPMGRQLSAALVDMDTENYRWVQSTDEDAQEGLESGEYAAVVTIPEGFSREVLSTAK DDPMDVKQATIRVQTSDVSPVNNAVVSRALIEAARTKFNSDVTETFLDKVFVGFNDMKDQ MRTMSDAAGELNDGAGQLSNGTSELADGAGQLSNGLGKLDANGGKLTSGATQLANGAGEL SKGAGDLSDGASQLSNGLGEMKTKTKDLPKQSQQLAKGAKDLSDGVEKYTGGVDQLADGA GELSKGVNEFTGNIDDVVIKVRDFTSELEKIDLDELRKLQDSDGLNKIADNEKDLERFKK GIESLKSGLSEYQKELRAQAKKIDASKVTNLNQAAKLGIITQDQAAQIRGKICQKLPEGT KDPACDVVESAYVSGLVNGYVKGLKSAADGLDKKDPSTGKSIIDGSESLDEAAKRINDHV TAIKKTLDKYKDIDLGDVGKSLDELEQKLDKFKKGTDQLLDGSKQLRKGASDLSDGANKL SKNGDKLVDGSQKLADGTSKLAKGTGPLVDGIGTAADGSKKLSDGAVKLSDGADKLSDGG HELSRGLRQYVFGVSQAADGAQKLNTGTRQLADGADELADGTGKFAEGIEEGKEKIPSYT APERDKLSTVVSAAIDGSSTKFVNGALAQAVALMLILALWVGSLLTYTVVRAVSATALTS RRSSVAIMLRGLVPGLAVAAVQALLVTALAVPVMDIPVSKGVHLFAFALFASLVFTVLNF ALVGLFGAFGQMISLVMIVVAVAAHLFTTPPQVLTGLAGFMPPAHGIEGAVAIVTGTPGA GGAWGTLFLWLLLGVGASIVAVARARSVKSVASVAHA >gi|294970398|gb|ADNU01000091.1| GENE 7 9388 - 11331 1187 647 aa, chain - ## HITS:1 COG:no KEGG:AAur_0841 NR:ns ## KEGG: AAur_0841 # Name: not_defined # Def: hypothetical protein # Organism: A.aurescens # Pathway: not_defined # 6 642 9 644 645 321 36.0 8e-86 MAHLSVAVIGAGPRGLSVCERLTALAPQYKHPVTIHVIDPYAPGPGRVWDTEQSPELLMN TTISEQTIFPDDSCDFSPTNTGPSMRDWYLATDGTEDPDTTFCSRALYGEYLSDAFTRVR ENAPENVTFEVHRAQALRIADPGSPVELSQIVRLSDDTSVTVDAVVLCVGHIPSRLTDER IQLERYATANGLNYCPPSLPAETPVDRVVAGETVIFRGFGLNYFDLQALLTHGRGGAFVP RAPSPDRGGRCEPWELEYVPSGKEPVLAPSSRRGIPYRCKPVTPDHPMEPYALRFFTDDN VTTLSSGKLLHFDDQLWPLILTDLRYAWYAALYRSQPELFLRDPAPLKEALTEAVDRHLA RRSGAETQGRVTGRETHEAPALHEVLDSVVPREHQLDLQALLRPLNDKEFESRDQLTVWI NGFLEQELRDAYAGPELAPSKAVFAVLWAARSFLKELVADGRVSPASFATEVRGWFESFV SGICDGPPPQRFAELLALSKAGLVTYVGPQVKIDTSDEEPAFIASTPVVKGDIIAHNLID AASPTNHIRLADDELITSMLDRGQLTVATITSDEGTLLPTSGPLVERATLRTVDSRGRVH PNRYVMSIQLSSLQLGLAIAANPNSNARTLRDAHGIARRIYGMETER >gi|294970398|gb|ADNU01000091.1| GENE 8 11331 - 12776 1195 481 aa, chain - ## HITS:1 COG:BS_yvhJ KEGG:ns NR:ns ## COG: BS_yvhJ COG1316 # Protein_GI_number: 16080605 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 138 369 75 274 391 75 24.0 2e-13 MVRKNRSSKLGWFLLIGFCAGILITGIMTLALGPIRVIARVISSPTILNILAFTLLAGLV IWVLIIIRSYIVSSRGATMSNQQRVLSGVLVVSLMLIVAIPLGVGGAYSKVSSNTVSKIF GPEGAPGGTGKEQVWADKPRINVFLIGRDNGENRTGTRPDTMLVASIDTRNGKSTLISVP RNLTYPIFPEDSKLAKTFPDGFNALGEESLINSVWSWAEDNAESVGETHGLETGMWATMQ AVEGSLDIKLDYWASVDMQGFRDLVNAMGGVKIDVERPIPMGGGQNQHTGAKNRIFGWID PGEQKLSGMQALWYVRSRDGSDNYDRMCRQQRMLKTTLEQANPSELALKFPQLANSSTKN VATDINQKELGGFVELAWEMKNTKIKSAQINNEVTPTYRPDYDELHKWVKDQINPQKPSQ KEESKDKGKDKEKPQPTEEPTKDAGAPAPGIEDDEGKCYPSGYTPGDPWPGYPGPGNHGD H Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:21:46 2011 Seq name: gi|294970396|gb|ADNU01000092.1| Brevibacterium mcbrellneri ATCC 49030 contig00143, whole genome shotgun sequence Length of sequence - 986 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 131 - 986 273 ## Blon_1168 transposase for IS3509a Predicted protein(s) >gi|294970396|gb|ADNU01000092.1| GENE 1 131 - 986 273 285 aa, chain + ## HITS:1 COG:no KEGG:Blon_1168 NR:ns ## KEGG: Blon_1168 # Name: not_defined # Def: transposase for IS3509a # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 262 86 348 369 177 40.0 4e-43 MLDGTYFNGWCVLIAHTGTHVIDWQWCDREKLASWTALLARIPPPDYAIIDGNGPLHRAI KNCWPHTRIQRCYFHIRNTAHRHLTRTPKLPANKELLALYKALSKVQNTDQAATWTAGFL HWEATWNTFLKQRTYATKNTPRPAHASPHQKWWYTHIHTRRAHKLLATLLTTNELFTWLN THTKRPVANTTNPLEGGPNKAIKDFLRNHRGLTINHARRGIDWLLYKATHNPKDPWDFVT ETHWNPPQPHTHTQPDEPIGPAEYDTRFTYEDGIKLRQGWAGKHP Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:21:54 2011 Seq name: gi|294970388|gb|ADNU01000093.1| Brevibacterium mcbrellneri ATCC 49030 contig00145, whole genome shotgun sequence Length of sequence - 10152 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 4, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 76 - 151 81.7 # Arg ACG 0 0 + Prom 259 - 318 2.5 1 1 Tu 1 . + CDS 460 - 2289 1990 ## COG1274 Phosphoenolpyruvate carboxykinase (GTP) + Term 2315 - 2368 18.6 - Term 2306 - 2351 13.6 2 2 Op 1 . - CDS 2434 - 3012 402 ## gi|295396756|ref|ZP_06806894.1| hypothetical protein HMPREF0183_2392 3 2 Op 2 . - CDS 3009 - 4313 369 ## CMM_2904 hypothetical protein 4 2 Op 3 . - CDS 4313 - 5110 221 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 - Term 5112 - 5154 -0.9 5 2 Op 4 . - CDS 5170 - 6636 865 ## gi|295396759|ref|ZP_06806897.1| conserved hypothetical protein - Term 6766 - 6815 18.1 6 3 Tu 1 . - CDS 6839 - 9451 2925 ## jk1274 putative secreted protein 7 4 Tu 1 . + CDS 9204 - 9695 172 ## Predicted protein(s) >gi|294970388|gb|ADNU01000093.1| GENE 1 460 - 2289 1990 609 aa, chain + ## HITS:1 COG:ML2624 KEGG:ns NR:ns ## COG: ML2624 COG1274 # Protein_GI_number: 15828418 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (GTP) # Organism: Mycobacterium leprae # 13 608 9 606 609 775 61.0 0 MTVLDPGSVEDLLKNAPTQNETILQFVKRVASLSTPDQIEWITGSKEQRAEIADKLVEAG TLVKLDKQKDSYYAASDPDDVARVEDRTFICSEKEEDAGPLNHWMDPAKMKEILNDLFTG SMKGRTMYVIPFVMGHTEADQPMFGIEVTDSPYVVLSMLVMARCGNEVLRAIENHDGKFV ECVHSVGAPLEEGQEDVKWPCNPTKYITHFPQDRAIWSFGSGYGGNALLGKKCYALRIAS AIAREEGWMAEHMLIIKLTNPEGESKYIAAAFPSACGKTNLAMIEPTVPGWKAETLGDDI AWMRFGEDGQLYAVNPEYGLFGVAPGTGYSTNPTAMRAIEAGGNVFTNVALTDDGDVWWE GMTDETPAHLTDWRGNEWTPESETPAAHPNSRFCTPITNVPTLAEEYNNPNGVPISAILF GGRRKTTMPLVTETRDWQHGVFMGSVLSSETTAAATGKVGVVRRDPMAMRPFIGYNVSDY LQHWLNIGQTEGAKLPKIFYVNWFRRDEDGSFLWPGFSENSRVLKWVFERIDGKADAEET PVGNTPSADALDLEGLDVTPEQIAKAVAIKPEEWADELESIEEWYAQLGNDVPAELQGEV DQLRTRLGL >gi|294970388|gb|ADNU01000093.1| GENE 2 2434 - 3012 402 192 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396756|ref|ZP_06806894.1| ## NR: gi|295396756|ref|ZP_06806894.1| hypothetical protein HMPREF0183_2392 [Brevibacterium mcbrellneri ATCC 49030] hypothetical protein HMPREF0183_2392 [Brevibacterium mcbrellneri ATCC 49030] # 1 192 1 192 192 313 100.0 6e-84 MTYLLKARQWPILLVISVITGVIAGGFVEVDIPLPLLSVAGLPQPVLPALGFVIVVSACV HRAEESWSCASVRNTISHSHVVMVGALVLAVLASVVSSSFSAQNSVLILRDFVGLTALVL VGRLMINGRYASLVPATYVIVAGAFARDRLGEIRAWCWIVDRDISNPWAWLTCCVGIAAA IAYQTRRTPIFN >gi|294970388|gb|ADNU01000093.1| GENE 3 3009 - 4313 369 434 aa, chain - ## HITS:1 COG:no KEGG:CMM_2904 NR:ns ## KEGG: CMM_2904 # Name: not_defined # Def: hypothetical protein # Organism: C.michiganensis # Pathway: not_defined # 1 277 4 280 432 92 29.0 3e-17 MIRLKRRPAWWIAGVAAVLATLYLLAYADRDFLVANRIASVTTGSFLLLFSCATASLSSA IEAGRERESRGVFENSRRPFTTQVIERTWPGVLSGVLVQLAGVAILLVLAGSSDRGIPWF LIVGQVLAVVMHGMLGYVLGVWLRPVLAIPLSVVVPYVWIGATWSIDFFGIRYLAGLAFE GCCTPTSVLDTKAVAGFIVFSAVATVACFLAINSHRYSRQRDLPRTWVRVACSALVLIVG LVLGLGLTAGVGPNPDSPRPTIELVCDQSEPQVCFFPGQFSRNDNRAVYVHVFSQANETG LPKVVRIESTADPSILMAGPNGDWTVNVVAQPTFDVYDSALAAASSYAAHVVNTDCSDDN VHAQMSAVTAWLWIKGLQASGVRADVEDAKAILDPSAETTLQRLLQANKSEAGAWVARTF DSATRCERPKPFAS >gi|294970388|gb|ADNU01000093.1| GENE 4 4313 - 5110 221 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 41 234 43 233 318 89 30 8e-18 MSVYSFPVVAVGIEGLSFSRSRSREVFENFSAHFEPGKTLLLGPNGAGKTTLIEILATVL RAQRGDISLVSSKGSISIKNDVRRYRQAVAWMPQHFSPVRGLTVEEHVQYVAWLHGAKSQ ETKPRATHACDLVGLEGMKTAPVTALSGGQKQRLGLAGVLATGADVLLLDEPTVALDPAS RERFMEILRELPEDKTVILSTHQTDDVAQTFDHVAVLQSGNLQFQGSMHEFLQRGRVASA PELTVTNARAEDIGRSYAATIQREL >gi|294970388|gb|ADNU01000093.1| GENE 5 5170 - 6636 865 488 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396759|ref|ZP_06806897.1| ## NR: gi|295396759|ref|ZP_06806897.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 52 488 1 437 437 837 100.0 0 MRAKLWARTRTVAIAMSVFLVATAGTACDVLWPGPGPDPAPVPISTSAPQNMTREEFRDF SQSQKGIKDAEVKGDRIRIEVDEKASPGELSTTMDKLEEKYRKARFDGGADLVIARGVFE AKVTYVDPTSSPSIPRRAFPSFDLVHQLAGHKHITSGTIRGKRVSATVDKDPFDWMRTEA KDVDGVFTATNGEKEDAKRTDVTMNPHDVAQQRLADAIHAEVKKNGGELRELEVGFEPQT SSDHVSVNASFPDAKAVDKVSGVFAKDHKDVSTRFITSGLRVIQSAEGSLPRHRKQIDSE QALGVYRQLTAKNINVEIVDLSEARFEVALETSQQIRTTLSEVNGLPAGVGSVSVRHKDQ RADSNTYLNRDEWGQYASVVANMWDAGFYDFTLSTMFVRNAKFSVDFETPVEGPALRPSH ARAGIQALRASGYDGVAYISVNEGNHLDFVSTVCGKAKKARNALSGAPSKPDGAERAFLD EWNRTATC >gi|294970388|gb|ADNU01000093.1| GENE 6 6839 - 9451 2925 870 aa, chain - ## HITS:1 COG:no KEGG:jk1274 NR:ns ## KEGG: jk1274 # Name: not_defined # Def: putative secreted protein # Organism: C.jeikeium # Pathway: not_defined # 47 778 111 859 860 894 65.0 0 MPRKISTKIMASGLACGLVASGVAFGAPALAEIADQNGANNSMAGPFVRTATYPVYQNVP KDVDPNDETVAEISTVTPDGNTMIYTDAAGKRIGFLDISDPANPKGDGSLNLATLGNADD QPTSVAVAGDYVLVVIDETGGDFENPKGRVDVVKLPDHSRVASIDLKGQPDSIAISEDGK HAAIAIENQRDEDKGDGGLPQMPTGFLQTINLDGDPSNWDAKPIMFNDEDGNPLPILKDA GLDTPEDLEPEYVSFNSGHKVAMTFQENNGVAIVDVATGEIESVFNAGAPTIKGVDATKD GLIKATDSITAPREPDAIEWIDDEHVATANEGDWKGGSRGWTVFDTKGNVAWDAGNSFAE IAIQHGLHNEKRAEKKGPEPEGIAVAEMNGTRYAFVGSERSNFVAVYDVENPAEPKFKQL LFTTNGPEGILPIPERNLLAISSEVDEADNAVRSSVGLYELGGKQPEVPQPSIVSDKAEG QYIGWTALGALTADQKDATKLFAASDSALSHGQVYTVDASQTPARITEARAVMDQGEPAE GLDIEGLATRKDGGFWLASEGKTGAENALIRTDDKLNIEERVSLPEEISKHIGKWGLEGV DSHVNAAGEEEVFFVVQRPLWEDPEAKKRKALEGENTTRIGKYNVKTKEFDWFSYELEGT DTKGDWMGLSEITVIDDKTVAVIERDKLNGPDAKVKRVVKVTLPDVPDADAGGVPPAQPV TKADAVDVLPYLKATNGWTQEKLEGFTIAADGLAYAVTDNDGLDDATGETVFLRLGKIFD AEEPPAEEPTDEPSDAPSETPGEEPGEPAPSEAPAQPGDGSDDDSTSGQGDDNDGKPLPR TGVNVAVSLGLAALLVGVGGAAVLLARRKK >gi|294970388|gb|ADNU01000093.1| GENE 7 9204 - 9695 172 163 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVFPSGVTVEISATVSSLGSTSLGTFWYTGYVAVRTNGPAMELFAPFWSAISASAGAPKA TPDATSPQASPLAMILVLILRGIYVLLLQACFPRGMGLVQFGCVARLAGHTGRHFITRFY TFAVNTFLHECCARVNRAGGWGTMARPVTVYPPAQPGDGTPCP Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:22:55 2011 Seq name: gi|294970386|gb|ADNU01000094.1| Brevibacterium mcbrellneri ATCC 49030 contig00146, whole genome shotgun sequence Length of sequence - 734 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 151 - 733 243 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|294970386|gb|ADNU01000094.1| GENE 1 151 - 733 243 194 aa, chain + ## HITS:1 COG:SMc00343 KEGG:ns NR:ns ## COG: SMc00343 COG2801 # Protein_GI_number: 15964016 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 2 167 8 169 390 64 32.0 1e-10 MTYSRNRAVVLAIVNSGMSVKDAATHFGISTRWAKTLLQRFRTGGLEALQPRSTRPLNNP NKTPEHIRETIVELRHQLLRDGLDAGAESIYDRLPENTRPSTSTIWRILKTSNEITPQPQ KRPRSSWHRFQAPAPNSLWQSDFTHWPLADGTDTEIISWLDDHSRYLTHISAHPRITGHI VVDTFLEATDQHGL Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:22:56 2011 Seq name: gi|294970384|gb|ADNU01000095.1| Brevibacterium mcbrellneri ATCC 49030 contig00148, whole genome shotgun sequence Length of sequence - 1068 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 974 434 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|294970384|gb|ADNU01000095.1| GENE 1 2 - 974 434 324 aa, chain - ## HITS:1 COG:Cgl0698 KEGG:ns NR:ns ## COG: Cgl0698 COG2801 # Protein_GI_number: 19551948 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 20 292 25 298 481 135 32.0 1e-31 MNNSNKNLTIVFAVTKQGMTVTQAARKFGVSRQWIYTLIRRYTTNGKNGLQPASKAPNNP SNRLPQALIDHIIAIRKELHTTGHDAGPLSIQHALEDRGHRVPSDSTIRRILHREGLITP QPAKRPRNSYIRFQADLPNERWQADITHWYLNDDTTRVDILDFIDDHSRYLLGIQARLLW TGAHVTTYTQQLFDTYGPPASMLTDNGMVFTARYTSKPGARNGFEKLLNTHHIRQQNGRP GHPQTQGKIERFHQTLKKYLKAHPRPETIPALNELLEEFRTYYNTQRRHHAIGRQTPQTV YTANPKATPNTTPDNELRTRTDII Prediction of potential genes in microbial genomes Time: Wed Jun 29 03:23:07 2011 Seq name: gi|294970350|gb|ADNU01000096.1| Brevibacterium mcbrellneri ATCC 49030 contig00149, whole genome shotgun sequence Length of sequence - 36072 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 5, operones - 5 average op.length - 6.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 65 - 124 2.5 1 1 Op 1 . + CDS 184 - 2040 1105 ## COG4425 Predicted membrane protein 2 1 Op 2 . + CDS 2047 - 3147 1086 ## Arth_3730 hypothetical protein 3 1 Op 3 . + CDS 3185 - 4360 1182 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Term 4134 - 4177 5.6 4 2 Op 1 . - CDS 4371 - 5171 638 ## Tpau_3273 hypothetical protein 5 2 Op 2 . - CDS 5203 - 5754 241 ## gi|295396771|ref|ZP_06806906.1| conserved hypothetical protein - Prom 5895 - 5954 2.1 6 3 Op 1 . + CDS 5671 - 9702 2938 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 7 3 Op 2 . + CDS 9711 - 11015 919 ## COG0308 Aminopeptidase N 8 4 Op 1 . - CDS 11012 - 11473 371 ## Bcav_1048 GCN5-related protein N-acetyltransferase 9 4 Op 2 . - CDS 11483 - 12820 1395 ## COG0534 Na+-driven multidrug efflux pump 10 4 Op 3 8/0.000 - CDS 12887 - 14548 1887 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 11 4 Op 4 10/0.000 - CDS 14609 - 15808 1456 ## COG0183 Acetyl-CoA acetyltransferase 12 4 Op 5 . - CDS 15821 - 16570 186 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 13 4 Op 6 . - CDS 16656 - 17291 401 ## COG0009 Putative translation factor (SUA5) 14 4 Op 7 . - CDS 17295 - 18512 1073 ## COG0628 Predicted permease 15 4 Op 8 7/0.000 - CDS 18512 - 20023 1040 ## COG1160 Predicted GTPases 16 4 Op 9 1/0.000 - CDS 20020 - 20700 744 ## COG0283 Cytidylate kinase 17 4 Op 10 . - CDS 20697 - 21785 762 ## COG0287 Prephenate dehydrogenase 18 4 Op 11 12/0.000 - CDS 21782 - 22597 774 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 19 4 Op 12 21/0.000 - CDS 22594 - 23145 533 ## COG1386 Predicted transcriptional regulator containing the HTH domain 20 4 Op 13 3/0.000 - CDS 23120 - 23716 539 ## COG1354 Uncharacterized conserved protein - Prom 23816 - 23875 2.2 - Term 23861 - 23890 -0.2 21 4 Op 14 1/0.000 - CDS 23902 - 24657 802 ## COG1192 ATPases involved in chromosome partitioning 22 4 Op 15 3/0.000 - CDS 24789 - 25727 606 ## COG4974 Site-specific recombinase XerD 23 4 Op 16 . - CDS 25724 - 26356 406 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 24 4 Op 17 . - CDS 26356 - 27465 1008 ## gi|295396790|ref|ZP_06806925.1| conserved hypothetical protein 25 4 Op 18 . - CDS 27528 - 28448 791 ## HMPREF0573_11888 hypothetical protein 26 4 Op 19 4/0.000 - CDS 28474 - 29262 593 ## COG4825 Uncharacterized membrane-anchored protein conserved in bacteria 27 4 Op 20 17/0.000 - CDS 29284 - 30990 1310 ## COG0497 ATPase involved in DNA repair 28 4 Op 21 5/0.000 - CDS 30987 - 31895 576 ## COG0061 Predicted sugar kinase 29 4 Op 22 . - CDS 31892 - 32644 468 ## COG1189 Predicted rRNA methylase 30 5 Op 1 . - CDS 32775 - 33740 791 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 31 5 Op 2 . - CDS 33743 - 34696 870 ## AAur_1649 hypothetical protein 32 5 Op 3 . - CDS 34729 - 35748 513 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + 5S_RRNA 35823 - 35936 91.0 # Z50061 [R:1..120] # 5S ribosomal RNA # Amycolatopsis orientalis # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Pseudonocardineae; Pseudonocardiaceae; Amycolatopsis. Predicted protein(s) >gi|294970350|gb|ADNU01000096.1| GENE 1 184 - 2040 1105 618 aa, chain + ## HITS:1 COG:Cgl2849 KEGG:ns NR:ns ## COG: Cgl2849 COG4425 # Protein_GI_number: 19554099 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 14 567 69 574 592 278 33.0 2e-74 MKRIAAAFGHASSWTALTPSLIPRTWWMTAINVAVNAYAGQKAGELAHALLNRNRRNAPA TSSRTQHPAQHRPQHPSHPNKSTSPAPPGFRIARPATQSVSRNIALLSLAGAGSAFAISR SIREQEDIAQRTNDHTVSVREHVFGYIVGELAWLSLDLASLGMNRLRQRLERRLHTRLPF MPELVITALSVGAMAYSSRKLISTILFRLAEQAVRSDFARPSLARRPSEPQRSGSRYSQE RFSTLGYHGRDFVASGPRKDRIQATLKRTSGKSHTPTDTAHEPIRIFIGRLSHPDLSDAA EAAVRELDRTGAFDREALLLVTNTGSGWTPQWSVEAFEYLMGGNCASVAIQYSFAGSWLA FLIHRDQAIYASRALLEAVERHLSTLDKHSRPRIYVTGESLGALGGHGAFTSLTDMRQRV DGALWTGTPRTTPIFKNLIASRHVLSPEIQPVIGRGSRVRFVQKPKQLKESPLGPYRPWI GSRIVYAQHPSDPVVWWSPSMVIRKPDWLREPRGKDVSPYVVWFPWLTFWQLLADMPRSV QLPGGRGHSYHREVVHYWNEILDTHFTKKDCTKIGDAIADDIARKSTGQAWRHPEQNTTH QSMFDKLLWAILQRRKDS >gi|294970350|gb|ADNU01000096.1| GENE 2 2047 - 3147 1086 366 aa, chain + ## HITS:1 COG:no KEGG:Arth_3730 NR:ns ## KEGG: Arth_3730 # Name: not_defined # Def: hypothetical protein # Organism: Arthrobacter_FB24 # Pathway: not_defined # 6 365 388 776 777 95 25.0 5e-18 MATRSKSRRIVEFDLVRGFFIMVITLDHLAYWPSPLAFFSGKGWLWVSAAEGFFLISGFL IGYIRAYKGRHKDLWPITKSLWRRALKLYVWGVGITLFLSAITVMVPPDNVNTLPSLPPE DSSAGSTIVNALLMRTFHAWIFFLRMYTVMLLVTPLFLWLVRKGKLWIAVIASTVLYAVS LFFDAPEAVVQWQLLFFLAAALGYVFTPVRNWMAEHLTWRNLLIVGLVSVTAVTMILSGI AIHGEYLMNRIGLGEFQSALYHWGSGAFSNFPMQPGRMILAFIWFGGFLAFFHVFRDPIM KYLGWILVPFGKYSLTAYCLQAILLPFIVIVTEASGPLWNMFIGLLTLMLMWLLMKSKLV LKIMPQ >gi|294970350|gb|ADNU01000096.1| GENE 3 3185 - 4360 1182 391 aa, chain + ## HITS:1 COG:MTH1894 KEGG:ns NR:ns ## COG: MTH1894 COG0436 # Protein_GI_number: 15679876 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Methanothermobacter thermautotrophicus # 1 378 3 370 374 237 35.0 3e-62 MPKLSQTAHSFPDSEIRRIFELSLELDDVIPLSVGEPDLPVPQHILEAGARAFKDGMIRY APNSGIMPLRRALAKKVTEFNKYPVDPDQIHIGAGGSNSLHMAMSLALGPGDEILVPDPG YATFFMTPRTVGATPVGYPLKAEHGFIPQIEDLKSLVTPNTKAILLNSPSNPLGVVFERD VMVALMDFAKEYDLWVISDEVYEYLVFDGEFISPATLDHDNRVLSVYSFSKTYGITGGRV GYLVTPPGMTSRVGALQEANVSCVNTPAQYSALAAVEGPQDDVHKALEHYRTNLARAREV LDAKNIEYLTPRGAIYLFINMSHATGGDVSTWAENFLLEHKVALAPGTAFGQHGEGWVRV CFAGDTDFLVEGLSRLPSRPQENDEEPRPQE >gi|294970350|gb|ADNU01000096.1| GENE 4 4371 - 5171 638 266 aa, chain - ## HITS:1 COG:no KEGG:Tpau_3273 NR:ns ## KEGG: Tpau_3273 # Name: not_defined # Def: hypothetical protein # Organism: T.paurometabola # Pathway: not_defined # 5 265 4 265 269 223 47.0 7e-57 MTESVFDQAIAVSFEGNRAHASTHPKFHNMVGPFGGITVATICNAVQTHPDAQGRLAAIT TNFTSPLSEGDYELELECVRTNSSNQHWVVKGHQGENTPLTATVLLVAERGELRANEIPF PSVGAPEEYAVADGEERPEWSNNYELRFVEGGWEQIAEGPQDDTTSTYWLRHADGRPWDY AALVSSSDTFFPRSFLRAGQWLPAGTITITTYVSADAHVLESAGTDILCSARAQWFGSGL HDQTAQLWTQSGEVLAVSHQLVYSKL >gi|294970350|gb|ADNU01000096.1| GENE 5 5203 - 5754 241 183 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396771|ref|ZP_06806906.1| ## NR: gi|295396771|ref|ZP_06806906.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 183 1 183 183 354 100.0 1e-96 MDARIVRDTDVSADQVLVELVSHHYRIHPRDLQVHTHARGNLTVTDGTFEVECSVSRSHP YTAVAILTPGETGWIGIDIEPADALKVPPHTFTHILGPHERPHFTDLPEDDLGRALLRAW VRKEAVLKSMHTGFGAYEPAQIECGPPTDAECTSHPWITVSDMVTEDYVAALAVNPAGGH GRE >gi|294970350|gb|ADNU01000096.1| GENE 6 5671 - 9702 2938 1343 aa, chain + ## HITS:1 COG:Cgl2655_1 KEGG:ns NR:ns ## COG: Cgl2655_1 COG1020 # Protein_GI_number: 19553905 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Corynebacterium glutamicum # 54 680 2 633 636 608 53.0 1e-173 MYAVVVGDKFDEHLICRHICIPHNSRVHSPASVQSDAVNFCTIKATSKPYPRWSVNTYAP QFPAGHLASEPGTLIDLILKNVAEHPDTPAIDDGTTVLTYAELIEQMRSFGLTLHEHGVG PGDKVGVRVSSGSVDLYVSILSVLMIGAAYVPVDVDDPDERARTVFEEANVAAVITDGPT ITKVTTRETPPELRAPVPEDDCWVIFTSGSTGKPKGVAVTHRSAAAFVAAESQIFCQDEP LGPSDRVLAGLSVAFDASCEEMWLAWGHGACLVPAPRALVKSGMDLGPWLASRRISVVST VPTLAALWPPETLDNVRLLIFGGEACPLELAQRLSDGDREVWNTYGPTEATVVACAAPLG EEPVRIGLPLAGWDLAVVNPETGIPVAEGETGELIIGGVGLARYLDPEKDAEKYAPMETL GWERAYRSGDLVINDPAGLIFVGRADEQIKLGGRRIEMGEVDAALQSLPGVHGGAAAVKT TSGGVQLLVGYLAPSPGVTGDAQQLEAWAQQLRDVLPPALVPRLAIVDDLPTKTSGKVDR NALPWPLPGMEVTDDSGDVPAAYAWIAEQWEATLGAAPGMNTDFFNAGGGSLAAAQLVSR LRTNFSAITVGDIYAHPRFGALAEMCTGTEPTTQRSERTVKRTSRFMQWMQTLLGIPVHI LAAMHWIVMTLAAMNVFALMGAPVVTTSWWLIAVLYLVFVTSWGRMLVSAACARLLLGSL KPGVYQRSGWVHLRLWLAEHIADNASAVSVGSAPWVTWYARLLGNKLGRDVDLHSIPPVT GMLTLEEGAAIEPEVDLKGWWVDGDLLRVGPIHVGKYAVVGSRSTLMPGTRVGSEARVAP GSAVTGKVRKKQVYSGSPAQRTSKKHHRWPAPPEKRAHLPFLLYAIGSVLHALIPYLAAV PPIALMLWIYGVEVITQPLTLLAWSPLLALIWFAFTALFVLIAVRTLSIGLREGTYPVRS LMGFRVWATERIMDMARDLLFPMYAGLITPVWLRLLGTKVGSGVEASTVLLVPKMTHIAS GAFLADDTMVASYELGNGWMRIGHAKVGKRAFLGNSGIAAAGRRVPKNALVAVLSAAPPK SKKGSSWIGSPPVELRRAEVAADESLTYAPPKKLKVARGAWETLRLLSVGVAGLMVAGVI LTLMWITQAGHSALWAILLSGVVMMCAGAVAAGVAVVTKWLFIGRIPAGEHPLWSSFIWR NEVADCFVELIAAPWFTRKAVGTPALVWYLRALGAKIGHGVWCETYWLPEADLVVLENNS TVNRGCVVQTHLFHDRVMSLDAVTLEDGATLGPNSVILPAATLGRSSTVGPTSLVMRGEF VPANAYFTGNPVVPWVDAPVDQE >gi|294970350|gb|ADNU01000096.1| GENE 7 9711 - 11015 919 434 aa, chain + ## HITS:1 COG:Cgl0338 KEGG:ns NR:ns ## COG: Cgl0338 COG0308 # Protein_GI_number: 19551588 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Corynebacterium glutamicum # 3 432 16 457 460 339 42.0 7e-93 MTDPYLPQSGSTSYKVAHYDLRLDYHTAPNRLNGIATLEIEPLEAVSSFKLDLSGLTVTK VYVNGKTARFKQSPGQVTVRSALTPGKPVRAEVRYNGNPAPAMGTWGDVGWEELEEGVLV AGQPNGASTWFPCNDHPRNKSTFTITILSDSDYASIANGTLTSTRRKASRTEWVWDCQVP MATYLATVQIGPYKMGPLEPGQHRPSRVPLALATSEHNWAKAQNFLSLQHQMMNVFEDLF GPYPFDRYGVVVTNEHLEIPLESQPLSILGPNHVGRSWEAERLVAHELAHQWFGNSVSLT TWSDIWLNEGFACYSEWLWAESKGHQAASGHAKRHWGLLKLKPNLILTNPGAPDMFDDRV YKKGALALHALRHHVGDEKFFTLLRTWTRTFKHANATTTDFLTLTNQVCGEGTNAVLTPW LYEKSLPPFPGGLF >gi|294970350|gb|ADNU01000096.1| GENE 8 11012 - 11473 371 153 aa, chain - ## HITS:1 COG:no KEGG:Bcav_1048 NR:ns ## KEGG: Bcav_1048 # Name: not_defined # Def: GCN5-related protein N-acetyltransferase # Organism: B.cavernae # Pathway: not_defined # 9 149 15 166 170 97 41.0 1e-19 MNFRGATEPSTSQLLEPFLLQCINWSGTNTSFDELDQQARSYVEDWGREGDHALIAWDGD KAVGAAWARFLPNGYGYIADDIPELGVAVIPEYQGRGIATKLISKLHAKLYDEGIESVCL SVNHGNPAAALFAQLGYITAGESGNSSLMIASI >gi|294970350|gb|ADNU01000096.1| GENE 9 11483 - 12820 1395 445 aa, chain - ## HITS:1 COG:Cgl1936 KEGG:ns NR:ns ## COG: Cgl1936 COG0534 # Protein_GI_number: 19553186 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Corynebacterium glutamicum # 6 430 16 435 435 172 32.0 1e-42 MRAVDRDILRLALPALGALAAEPIFLLADTAMVGHLGKDALASLALAGVVIQTVLGLMIF LAYATTPRVARFVGAGDYTRAVSAGFDGMWLALVVSVVLVAAGLPLLGPVLGMFDPSPEV FSGALAYVTVSWWGLPFMLIVIAATGLLRGMQDTVTPLVVAAGGFGLNIVLNAVFIYGMG LGVAGSAWGSVLAHAAMCTVYLVFAGRAARRHNASLAPDWAGVLSAATTSGWLLIRSASL RAALIVLVSVASVMGTVSLAAVQIAQTLFNSLALVLDSLAIAGQAMIGLYVGKDDTQKVQ TVKTRLIVWGVGFGVVVGLVLAALSPFVGRVFTSSPEVVSTVAGLVLILAVSMPLAGYVF TLDGILLGASDARYLAVAQFGAATGFGLLVWAAMGMSFTISALWACFCFGFMAFRAVGLG ARMRGNGWIRRARAVAVLDAKQKDH >gi|294970350|gb|ADNU01000096.1| GENE 10 12887 - 14548 1887 553 aa, chain - ## HITS:1 COG:SSO3064 KEGG:ns NR:ns ## COG: SSO3064 COG0318 # Protein_GI_number: 15899770 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Sulfolobus solfataricus # 33 550 16 513 513 307 35.0 4e-83 MSWIDEKPWLKTAYDNPEDVTPIPQTPPLDLWIDAVNEVPDHPAIYYYGTELTYSEVDRM SNAFAAYLSENGFGEGDPLGVYLQNVPHYMITVIAVWKLGGIVVPLNPMYRDELDHIFSD AGVKALVVSAAAFMDRVKDHAGNIPLVVTVGEHDFVTTNEPAIFDMFPQQIDTGKPDFLT VLKEHDGATVTVSKRAHDPDEVGLIGYTSGTSGKSKGALLSFKGLGVNSLMMVHRYKFEP KLSFYQMAPVFHITGFVCIFLASIATKATLVLNYRFDPAVALQQFRDTRPVFMAGPATAF TALLAQPDFTPDDFSSFRSIMSGGAPLPEGLVKKFEERAGVYVGQGYGLTETSAQCITVP HWLRAPVDPESGNLSCGLPSVEAHVRIAREDGSDCDPGEVGEVYVSGPMVALSYLNNPTA TENDIPNGELHTGDVGFMDKDGWVYIVDRKKDMINASGFKVWPREVEDVLYLHPAVSEAA VVGVPDDYRGENVVAFVTRRAGEDVTEDQIIEHCRKHLAAYKAPRQVNFIDALPKTASGK ILRREMREVAADQ >gi|294970350|gb|ADNU01000096.1| GENE 11 14609 - 15808 1456 399 aa, chain - ## HITS:1 COG:DR1428 KEGG:ns NR:ns ## COG: DR1428 COG0183 # Protein_GI_number: 15806445 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Deinococcus radiodurans # 1 398 10 401 402 524 67.0 1e-148 MTDAVIVSTARTPIGKAYRGAFNNTQSQTLAGHAIEHAVKRAGLEGGEVEDVIIGAALQQ GAQGGNVARQAAIRAGLPVEVSGMSVDRQCASGLMAISIAAKQILVDGMNIAVGGGVESV SLVQNDKMNTFKTKDPWIVEHRPDTYYSMLETAEVVAKRYGVSREAQDEYSYQSQMRTAA AQEAGKFDDEIVPLESTMLVQDKETKEISEKTLTLTKDEGNRPSTTLEGLAGLKPVLEPS ELSDTPCITAGNASQLSDGASAAVLMSDAEASRRGLEPLGIYRGIAVAGLAPDEMGIGPV YAVPKLLKQHGLTVDDIDLWELNEAFAVQALYCRDRLGIDPEKYNVNGGGISVGHPYGMT GARLTGHALIEGKRRGAKYVVVTMCVGGGMGAAGLFEVC >gi|294970350|gb|ADNU01000096.1| GENE 12 15821 - 16570 186 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 245 4 238 242 76 25 3e-13 MNRTAVVTGGARGIGAAIALRLAKDGHNVAVIDLREEDTQDVVQEIEAVGGKALGIGADV TDEESANQAVERIAQELGAPTILVNNAGIIRDDMLFKMPLEGFTKVLDVHLTGNFIMTKA VQKYMVEEKFGRIISMSSTSALGNRGQTNYSAAKAGIQGMTKTYAIELGKYGVTANAIAP GFIQTDMTKATAERIGMDWEEFVKLNITQIPVGRAGVPDDIAHTTSFLASEGAGFVSGQV IYVAGGPRN >gi|294970350|gb|ADNU01000096.1| GENE 13 16656 - 17291 401 211 aa, chain - ## HITS:1 COG:VC1178 KEGG:ns NR:ns ## COG: VC1178 COG0009 # Protein_GI_number: 15641191 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Vibrio cholerae # 1 200 1 200 206 233 53.0 1e-61 MAEILEIHPENPQPRLISSVVDVINNGGLIAYPTDSCYALGCSLDNKDGIERITRIRQLS AKHHFTLMCHDFAQLGQFVIVDNSAFRTIKALTPGPYTFILKATKEVPRRMLHAKKKTVG ARIPQNRLSLDLIEQVGEPILSSTLLLPGEDEPLTDPVDVEARIGKLVDVIVASGTPATT PSTVVDFSSSTPVVRRVGAGSIDLFDIVEED >gi|294970350|gb|ADNU01000096.1| GENE 14 17295 - 18512 1073 405 aa, chain - ## HITS:1 COG:STM1481 KEGG:ns NR:ns ## COG: STM1481 COG0628 # Protein_GI_number: 16764826 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 6 330 2 325 344 141 29.0 3e-33 MATDSARPAMLPRFLIIVLGLAGLAFGIQFIQGLQTIVAPVFLALNLVVVVHPLQAYLIS KRVPAIVAASITVVIVLALLVVFFALNAWAIAELVIVLPSYSHKLAQLYGEVIRFTTSWG LTPEVIQNQLSAFDFSSMTDAVLQVLSNVSAILALLTTVVMTVFFVIMDSLQFPARLREV GKVAPQFSFAMRSFGQGVRRYWVVATIFGLIVAVFDVIALWIIGVPLALVWGVLAFTTNY IPNVGLIIGLIPPALMALLEGGWWDAFWVVVAYLTLNFVIQAIIQPKFTGESVGVTPFIS FLSLLFWYWVLGPLGALLALPATLLLKALLVDADPRARWINLLISSGFNKHTGKVLATSG EPINPAPTSEPEPTVEPEANAESPEHPESPEDPDNPAPTSGDPIK >gi|294970350|gb|ADNU01000096.1| GENE 15 18512 - 20023 1040 503 aa, chain - ## HITS:1 COG:MT1753 KEGG:ns NR:ns ## COG: MT1753 COG1160 # Protein_GI_number: 15841173 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium tuberculosis CDC1551 # 64 501 23 458 463 509 62.0 1e-144 MTKEPDFSPVPDEDFHERFSAIDGDEERLREESLRAGLDDYELEDEDRELLDRSPEDLEA AGTSGPSPILAIVGRPNVGKSTLVNRILGRREAVVEDVPGVTRDRVSYTAHWAGRDITLV DTGGWDIDSKGMASRIAEQAEIAVELADAVVFVLDVHTGITSTDEHIVRMLRKTGKPVIV AANKVDDERSELAAFELWNLGLGEPSPVSAMHGRGVADLLDRAVEILPEVSGVDQMVEEG GPRRVALIGRPNVGKSSLLNRLVGSERVMVDNVAGTTRDPVDELVVLGDRQWRFVDTAGI RKRARQSSGADYYAALRTQTALERAEVALVLLEADQPISEQDLRVINSVIEAGRALVLVF NKWDLLDEDRRLELEKEIEMQLGHVSWAPRVNISAKTGRHADKLVPALDAALKGWDTRIP TGRLNAFLGELVAANPHPLRGGKQPRILFGTQAHPRPPKFVLFTTGFLDPGYRRFITRRL RETFDFTGTPVEINMRIREKRKR >gi|294970350|gb|ADNU01000096.1| GENE 16 20020 - 20700 744 226 aa, chain - ## HITS:1 COG:ML1371 KEGG:ns NR:ns ## COG: ML1371 COG0283 # Protein_GI_number: 15827716 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Mycobacterium leprae # 3 224 5 221 223 121 39.0 9e-28 MTVIAIDGPSGVGKSSVSREVARRNGFGYLDTGAMYRAMAWLCLQRGVSDPGDVVEQIRG VDFEISTDPEHESVEVDGIDVTSDIRSENVSTNVQIVSSVPDAREELIEMQRDIISRVSA DKGGIVVEGRDITTVVAPDADVRILMTAREDVRIARRAGEIHGEATEESVEATRAQVADR DRKDSATTSFLTAAEGVHTLDTTHIDFDESVAAVMGLVEEADGGNK >gi|294970350|gb|ADNU01000096.1| GENE 17 20697 - 21785 762 362 aa, chain - ## HITS:1 COG:lin2038 KEGG:ns NR:ns ## COG: lin2038 COG0287 # Protein_GI_number: 16801104 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Listeria innocua # 3 317 5 328 367 111 28.0 2e-24 MNVHIVGTGLLGTSLGLGLSRHGYRVTLEDLSPTSAQLAADMGAGEVARPEDPDVVVIAT PPDVVAQVIVDALRTWPNATITDVASVKTAILDAVKQHTRDRELDRYIGSHPMAGREKSG AIAARADLFMARPWVVCSDEDTPQERLEQVVTIAQAVGASVMHLDPLFHDSAVARVSHAP QVVASIMAAQLVDMPSEGVALAGQGLRDTTRIADSDPGLWTQILAGNAAEVATVLRDIRG DLDRVIDALDMRPGSLRTIAGSLAAGNDGRARIPGKHGLAPATYETVTVYVDDAPGTLSR LFTDIGDLGVNIEDIRIDHATGVKLGSVELSVVPAHVQVLIQGLRENGWRLPEQALDPKE EK >gi|294970350|gb|ADNU01000096.1| GENE 18 21782 - 22597 774 271 aa, chain - ## HITS:1 COG:MT1751.1 KEGG:ns NR:ns ## COG: MT1751.1 COG1187 # Protein_GI_number: 15841171 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Mycobacterium tuberculosis CDC1551 # 20 271 3 254 254 238 51.0 7e-63 MNFEKKRPSRKQREANIARAQKQTTSDPHTHSGVRLQKVMADAGLGSRRACEQMILDGRV EVDGHIVIELGTRIDPTKQRLVVDSMPIETSTEKVYFALNKPAKVVSSMGDPEGRRNLDE FVRDRTERLFHVGRLDYETEGLLLLTNDGDMANRLTHPRYEIPKKYLAQVKGPVAKDVGA RLREGIELDDGISRVDSFKLIDSQPGVALVEVILHSGKNRIVRRLLSAVGNPVLRLVRTE FGPIELAEQRQGKMRQLRPEEVSELMKAVDL >gi|294970350|gb|ADNU01000096.1| GENE 19 22594 - 23145 533 183 aa, chain - ## HITS:1 COG:Cgl1391 KEGG:ns NR:ns ## COG: Cgl1391 COG1386 # Protein_GI_number: 19552641 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Corynebacterium glutamicum # 6 169 20 184 192 133 47.0 2e-31 MTPLTTRIEAILTVIGEPVTTDELATALEANPEEIELAIEELQREHSTGRVSGFEIRKSA GGWQFYSRSEHYDTVKHFLTRGQTAKLSQAALETLAVVAYAQPVTRARIAAIRGVNVDGV VRTLLMRGLIVEAPKTEGPTQFVTSHVFLSAMGIDSLDELPAIAPYLPEDVPQEATFETK ETL >gi|294970350|gb|ADNU01000096.1| GENE 20 23120 - 23716 539 198 aa, chain - ## HITS:1 COG:MT1750 KEGG:ns NR:ns ## COG: MT1750 COG1354 # Protein_GI_number: 15841169 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 198 73 272 278 127 41.0 2e-29 MDQLSNFLLVASTLLDLKTARLLPAGTVEDELDLELLEARDLLFARLLQYRAYKAVSFEL GERITQTGYSVANSGNMSDFQGVLPPLIMSATTEMLAAMYATVLARDTTPPTVSIDHIHL QHVSVPEQRAHILGLLTEHETITFDELAQTADSTLVVVARFLALLELFKAGTIDLDQEAP LSTLVISGRTHDTTDHTD >gi|294970350|gb|ADNU01000096.1| GENE 21 23902 - 24657 802 251 aa, chain - ## HITS:1 COG:MT1749 KEGG:ns NR:ns ## COG: MT1749 COG1192 # Protein_GI_number: 15841168 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium tuberculosis CDC1551 # 1 249 1 249 250 315 64.0 5e-86 MVNQKGGVGKTTSSVNLGAALADYGRRVLLVDFDPQGALSVGLGLNPHDLELSVYNVLMS SRVNPSDVIQPTEHQLIDVLPANIDLSAAEVQLVNEVAREQVLARALDKVANEYDVILID CQPSLGLLTVNALTAAHGVIIPLETEFFALRGVALLVETIEKVQDRLNPGLEIDGILATM YDGRTLHAREVISRVVDAFDDKVFETVINRTVKFPDASVAAEPITSFAPKHSGAEAYRQL ARELISRGGAP >gi|294970350|gb|ADNU01000096.1| GENE 22 24789 - 25727 606 312 aa, chain - ## HITS:1 COG:MT1740 KEGG:ns NR:ns ## COG: MT1740 COG4974 # Protein_GI_number: 15841158 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Mycobacterium tuberculosis CDC1551 # 25 312 11 311 311 245 50.0 7e-65 MTGARHGAALLPDAPADLIRPVSEYLTYLQLERGSSRNTVDAYARDLAKYVTYLADTGVN DLGSVTSEHVAGFIEHIAHQNFAVTSRARITVAVRRLHHFTAGETGGTSPADDVQPPTDT MRLPKALSVDQVSRIIHAAGDPQSADPAQLRAVALIEFLYATGARISEAVGVDRDDVDVD AGIARVYGKGNKERLVPLGSHAIEALGAWLTRGRPAWAASSPAVFLNARGGRLSRQSAWA IVKKAAEIADVPRVTAHSLRHSCATHLVEGGADIRIVQELLGHSSVTTTQIYTQVTSQAL KEVYASTHPRAR >gi|294970350|gb|ADNU01000096.1| GENE 23 25724 - 26356 406 210 aa, chain - ## HITS:1 COG:MT1739 KEGG:ns NR:ns ## COG: MT1739 COG0494 # Protein_GI_number: 15841157 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 7 200 5 196 207 140 43.0 1e-33 MRDQYVDTQILDSDVVFTGAVWDVVEQRFVLPGTQTTLTRQIMRHPGAVAVVALDDDNRV MLMQQYRQPLRVIEWEVPAGLLDHAGEEPHVAAARELREEVDLSARTWNVLADQLTSPGG SSEALRIYLARDITTHPASERTAEEAQIKPHWVPLNDAVQAVMAGHITNATACLGILHTA RHAEAGFADLRPVDDPWPARDHLLNGFLNS >gi|294970350|gb|ADNU01000096.1| GENE 24 26356 - 27465 1008 369 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295396790|ref|ZP_06806925.1| ## NR: gi|295396790|ref|ZP_06806925.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] # 1 369 1 369 369 662 100.0 0 MSELLPADTRIMHVLTDANSVLAEVARHAIQAQLDAGYRVAVASRESVFKALNVSGERLR HIEIGAGAGLRLGDPNTALTLHKYYRHIDLVHAHGLHAAALSGAGLTGLPQSMHPTIVAS VGRDDSMIAEAQAQIVSKTATVVLGTTEPIVEKYMDTVAIVERAQLLSSDIDPVAQPRLS REDVRDLLDVPSGSWLVSSPVALIDSPAVTTIAEVGVRLASYRPDRSWVFALTGGGRSRS TVRSGIVDRVEHMRLAEEISTVDVLAASDVVVASDRMTAVDAERLMQLGRPIVFVGSEQH GRMYGDGVPQFAPDNVDGTLRAVAELIDRPAVRVQNGIHVKNRVSTARHTFIAEHLLSLY AQALVLNDD >gi|294970350|gb|ADNU01000096.1| GENE 25 27528 - 28448 791 306 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0573_11888 NR:ns ## KEGG: HMPREF0573_11888 # Name: not_defined # Def: hypothetical protein # Organism: M.curtisii # Pathway: not_defined # 1 293 1 301 326 104 31.0 5e-21 MIDFRYHLVSIISVFLALAVGIVLGAGPLKQPIGESLQSQVDSLRTDRDDLRAKLDEANG SIEDLNTYITESAPALLAETLKGTKVTLVSTPNTTSQTIKDVQGRLEDAGANVSDGGQLT PESLKPEESEKALEALKEIDPKLPADPREAFEKAIAHAYAGEHEGAYDAEKAAQVIDELR SAKRLNGGSYARADVVVFLLGDSTEEDTQPAEDYTGLLNALGSTAPTVATGSVDSGNNGA VKQLRDRKIAVTSVDGVDLSAGTVITALAVADLHATKKHQSYGFADSAKALVPNPLPEPQ SKPREG >gi|294970350|gb|ADNU01000096.1| GENE 26 28474 - 29262 593 262 aa, chain - ## HITS:1 COG:MT1736 KEGG:ns NR:ns ## COG: MT1736 COG4825 # Protein_GI_number: 15841154 # Func_class: S Function unknown # Function: Uncharacterized membrane-anchored protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 28 261 160 393 393 115 33.0 6e-26 MTQKNDPRAQLDSLVGEFASELGATLHEHPDLVESDIELPELPQSLRSRQALVVVAGAHY KEDLEMLRGYIKEYKPVLIGVDNGADALLDARLTPDIIVGDLNSVADASANCGAILLAHA PDENSSAGIERMKSQELKHHKLPTLGSNRDAGLLVADSLDAPLIVAVGSNDMLTDMVNDD ANVLGPSLITHLRLGSRLINAKGVSLLYRRQFSNWFLAGLALAGLFALFVALMATAAGQT FLGLLGAQFDGFFSWLGNLFSW >gi|294970350|gb|ADNU01000096.1| GENE 27 29284 - 30990 1310 568 aa, chain - ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 564 1 578 593 298 37.0 2e-80 MIESLSIHNMGVIENAHVDLGPGFTVVTGETGAGKTMFVSALNLLTGARAETQAVRSDAS KAVVEGIFSVESQPEVVARVEDAGGSVDDGELVVTRTIPTSGRARATAGGRTVPVAVLSH VGERLVSMHGQSEQLTLRSASKQRELLDTYGGEELAHVRDAYVNAYEEWKCVHERARELH ASEKERNARIEYLEGALAHIDRVRPVAGEDAQLKAIVLKLEAADDVKQTVQTACDMLVSD GFTETPTVVDLLHRAADHVNHARAHDNAVKEHAEALTALALSASDVASELSAYLASFAEL DDVSLEDTHARIAQLAELDQYGDGVDAVLEFETQAGEELLQLRADSSDLAGIDEQLRQCE TSLHEHAQALTEARTSAAQDFTSAVQGELAALSMPHARVVFDIKPAEPGPHGADAIRLLF SAHGGTAPGDIAKLASGGELSRVMLAIEVVIARTHAFPTFIFDEVDSGVGGAAATEIGRR LALLARHSQVIVVTHLAQVAAWADTHLVIRKDDSNESGAVSGVTEVADNQREAELARMLG GVSDSVAAREHATELMQTARTQKQGFTD >gi|294970350|gb|ADNU01000096.1| GENE 28 30987 - 31895 576 302 aa, chain - ## HITS:1 COG:Cgl1379 KEGG:ns NR:ns ## COG: Cgl1379 COG0061 # Protein_GI_number: 19552629 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 68 301 76 308 320 253 55.0 4e-67 MRNIVVVLHPHRAHARQAALDVCSLLHAENVTPVMSHDDYAALVSYEGEPSTPIKVLSIG ELETAKPELIMVLGGDGTILRAAGMYHETEVPIMGINLGHVGFLAESERQELEQATQAAI KREYFVEQRMALDISVTQDGHLLHRDWALNEATIEKGRYSSMIEVVVGVDYRPVSSFGCD GVIFATPTGSTAYAFSAGGPVVWPEVEALLMIPISAHALFTKPLVVSPRSRLGVEFLPSQ SHTDAQLWCDGQLRFKVPAGARVEAVRAQKSVSLARLNRDLFTDRLVAKFQLPVSGWRGP QA >gi|294970350|gb|ADNU01000096.1| GENE 29 31892 - 32644 468 250 aa, chain - ## HITS:1 COG:ML1358 KEGG:ns NR:ns ## COG: ML1358 COG1189 # Protein_GI_number: 15827705 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Mycobacterium leprae # 3 238 6 242 269 187 48.0 2e-47 MPRLDTELVARGLVTSRNRAAREIMAGNVTVNGHKATKPSHTVGPDDHVALTQADPWVAR SAHKLLGALSDLGIDRVDGLTCLDAGASTGGFTQVLLTKGAEHVYAVDVGHDQLHTSLRT DPRVTNLEGHNLRELTPEWTRGLVDLVVADVSFISLTLFIDRLVKVTRPGGHLLLMVKPQ FELDRSALDKHGVVTSAKKRQEAVDRVTAHLDSVGAHTVRNCESHLPGPAGNVEYFVYAE SPIGSKGEVT >gi|294970350|gb|ADNU01000096.1| GENE 30 32775 - 33740 791 321 aa, chain - ## HITS:1 COG:BS_yutF KEGG:ns NR:ns ## COG: BS_yutF COG0647 # Protein_GI_number: 16080282 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Bacillus subtilis # 2 236 4 230 256 158 39.0 1e-38 MYDAILLDLDGVIYRGKEPIPGASHTLQTWHSNGTPYAFITNNAARDVEEIAHTISSFDI PCTSQHVRTSAQAAAEKLAHDIDTGSAVLVLGGEFLRSCVESFGFTVITPEDRDWLTQNT PAAVVQGFGPQTTWTDISWAITAIRNGAQYRPTNPDKAIPTGRGIMPGNGTFVDIVATFS GTTPVYAGKPEPTMLTQTIDALGATRPLMVGDQLETDIEAAVAAGIDSALTLTGVTSIDV ALRAPQHQRPTRIVSGLPDLLEELPAAEVGPTEARCGSASVKVEAGVVAHDGDPLLAANA ALAYMHAHNTALDAGTLSGQL >gi|294970350|gb|ADNU01000096.1| GENE 31 33743 - 34696 870 317 aa, chain - ## HITS:1 COG:no KEGG:AAur_1649 NR:ns ## KEGG: AAur_1649 # Name: not_defined # Def: hypothetical protein # Organism: A.aurescens # Pathway: not_defined # 3 310 355 646 698 129 35.0 1e-28 MNNFKGRRPARRGGQDKRRQQQPGKHSRGYDRPRKMKEPELPEGVTGRILSGPVLQQLSP LSREHREVVSNHLAAAGTLIDSDPETAYQHARYAVESAGRIAATREALGLVAYRLGKYEE ALRELRTHKRITGATENGPVIADAERGREKPQKALDMFAEAKQSDFDPQTWIEFVLVVAG AHMDLDNLPAAKALIEAQGFTGHAPGSAVRLLSMYADILRAQGDTETGDKYEQLARRTAQ RTNVLFGDETPDPNEGIQIITIEEEPEEEIAEDEPATAEPDTPPEPRDTSAPDPNVDVED EVDEILAEAGIDPETVR >gi|294970350|gb|ADNU01000096.1| GENE 32 34729 - 35748 513 339 aa, chain - ## HITS:1 COG:MT2851 KEGG:ns NR:ns ## COG: MT2851 COG2070 # Protein_GI_number: 15842319 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Mycobacterium tuberculosis CDC1551 # 7 330 8 338 344 217 43.0 2e-56 MDVLDTLSVPIMCAPMAGGPSTPELAAAVTNAGGLGSIAAGYLSPEDFEQVLAQTRELTD TFNANLFVPETVRPDTDDLKRYASALQREFGEAVDVPEFNDDHFSDKIDLVLEHTPEVVT FTFGLPDPSTIRSIQSNGSYVGVTVTSSVEAVASVEAGAEFLIVQSTDAGGHLSVHRQDR AGTQRVLPDLVQEVRRKVSVPLIAAGGIGTVRQAQQALDAGAQAVSLGTRFLTAGEAGTK PAHADALVSGEFTRTVQTRAFSGRIARGLANTFTSAMEAEQIVGYPHVHYMTSPIRKAHA HDPQMLNLWAGTGFAHCATQSAVDIVREFSALRADRTHG