Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:30:49 2011 Seq name: gi|257443928|gb|ACYG01000001.1| Campylobacter gracilis RM3268 contig00052, whole genome shotgun sequence Length of sequence - 9958 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 2, operones - 1 average op.length - 14.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 88 - 1701 1334 ## CCV52592_0016 hypothetical protein 2 1 Op 2 . - CDS 1701 - 2282 599 ## CCV52592_0017 hypothetical protein 3 1 Op 3 . - CDS 2275 - 2715 376 ## ASA_2241 autolysin 4 1 Op 4 . - CDS 2712 - 3131 464 ## CJE0597 hypothetical protein 5 1 Op 5 . - CDS 3112 - 3453 349 ## CCV52592_0020 hypothetical protein 6 1 Op 6 . - CDS 3541 - 3774 307 ## CCV52592_0021 putative lipoprotein 7 1 Op 7 . - CDS 3758 - 4096 380 ## CCV52592_0022 hypothetical protein 8 1 Op 8 . - CDS 4093 - 4623 485 ## gi|257458663|ref|ZP_05623790.1| hypothetical protein CAMGR0001_2766 9 1 Op 9 . - CDS 4626 - 4880 203 ## gi|257458664|ref|ZP_05623791.1| hypothetical protein CAMGR0001_2767 10 1 Op 10 . - CDS 4877 - 5527 823 ## CCV52592_0024 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 11 1 Op 11 . - CDS 5538 - 6713 821 ## COG5301 Phage-related tail fibre protein 12 1 Op 12 . - CDS 6716 - 6856 82 ## 13 1 Op 13 . - CDS 6849 - 7232 374 ## CCV52592_0027 hypothetical protein 14 1 Op 14 . - CDS 7232 - 8218 956 ## CCV52592_0028 hypothetical protein - Prom 8297 - 8356 3.5 15 2 Tu 1 . - CDS 8410 - 9957 1200 ## gi|257458671|ref|ZP_05623798.1| hypothetical protein CAMGR0001_2774 Predicted protein(s) >gi|257443928|gb|ACYG01000001.1| GENE 1 88 - 1701 1334 537 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0016 NR:ns ## KEGG: CCV52592_0016 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 527 1 514 514 201 31.0 1e-49 MRSEAAAFYRNPSGDVVADATNGMIYSAVAYNKICEYLHKQLVRKGRAPQQIFIDTQKWE RVYYCRDLVPHEFDRRYYVGGYHLYTGGLQPYAYDGNDNLGLSQFFAGQKPTAPYSGPSD GQITDYFWIKKTKFSNFRIACKYSGRWNQYEIYRFFSLNRNRPIEKIIALCGITNYQIVK EFYDETKNMGGEFIDLDEGICYFYYMWFPDPNHQEGEHGGRPSKMRLGCTAYPLFYADSN SPVMGSRKWVKKWSQMYKLVYDRKSKGKFGKWGPIINIGIIAITFVLAAVTVGAYGPAAG ATIGALTGGAGAVTVGGVMATLAVAGAIGGFIATIGSLSGKKSLAKFGRVMGFIGAIGSI YLSVKSLFTQSVAAQNASTATNQALAGASGANQTCQLYNGVSPSSWIGSGSSAGLGYAAT QGVSIGGFAAAGATSTSQLYLTTALKVVGIGSKAFALVQDIRSEFRKHGDTQDTDMQEQS DDEKVISVSGDAQQDEGDVTRRFYERDAEYDIGLTGGTLISIDDSILDEPNSAVKSI >gi|257443928|gb|ACYG01000001.1| GENE 2 1701 - 2282 599 193 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0017 NR:ns ## KEGG: CCV52592_0017 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 8 193 10 202 202 153 52.0 4e-36 MADYKEAYSELYKRVLGDTMAEDTPYNKFTTKIDEYFEKYGLANDKKFEMLCSTLVSMTQ SVTTSSQDIALRLLSESEELPLRKQQLEAQVKIADADVKLKERELDLMEKKLNLADREAA FNEARTALIKEQTNSEKKRGQAIDREIKSYDDKLRIQEASLLKDSVFGYSVGGLNPPTEM TTKMFNAIDRITP >gi|257443928|gb|ACYG01000001.1| GENE 3 2275 - 2715 376 146 aa, chain - ## HITS:1 COG:no KEGG:ASA_2241 NR:ns ## KEGG: ASA_2241 # Name: not_defined # Def: autolysin # Organism: A.salmonicida # Pathway: not_defined # 1 145 1 150 152 80 37.0 2e-14 MSLIENIKTHEGFRDYIYKDSLGKATIGYGFLVAALSLDEIKLNGGKIEPMSREVAEKIL NLKVSKLKKRVFQCLPWLSGKPQNVQDTLIEMAYQLGLAGLLGFRHTLGCIEAGDYAQAA RNLRASLLYRQTPKRVEGYIKGLKNG >gi|257443928|gb|ACYG01000001.1| GENE 4 2712 - 3131 464 139 aa, chain - ## HITS:1 COG:no KEGG:CJE0597 NR:ns ## KEGG: CJE0597 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_RM1221 # Pathway: not_defined # 1 136 1 150 152 80 39.0 2e-14 MRIKINRFKNIHDGTIGKLTITDDGKRLFECFTLEPAGADTTERGKDRRIPAGRYQMEWY ASPSQKRMCPLLYSELVPKERYILIHPGNFPKDTAGCILVGDGYNAAGVSNSVRTYNSFF KICTGKHIEFIEITNEEGI >gi|257443928|gb|ACYG01000001.1| GENE 5 3112 - 3453 349 113 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0020 NR:ns ## KEGG: CCV52592_0020 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 6 107 2 128 136 67 36.0 2e-10 MELLDKVGFYFWVILVGFIGGILDYIDSGSKKKATSVIVGIATSMFLGWIGFEMANFFIK DTRASLAICGFLAWRGTEWIKETIDKAINSKLNRHDEYFDKFEERGDYEDQDK >gi|257443928|gb|ACYG01000001.1| GENE 6 3541 - 3774 307 77 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0021 NR:ns ## KEGG: CCV52592_0021 # Name: not_defined # Def: putative lipoprotein # Organism: C.curvus # Pathway: not_defined # 1 71 1 74 75 62 47.0 8e-09 MKWLVSIFALFLIGCSKPNIITRTEYKEVYIPVKCIKAMPKKPSYDFTPAAAKALMRYYK TCEELLRECSDGNDPKS >gi|257443928|gb|ACYG01000001.1| GENE 7 3758 - 4096 380 112 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0022 NR:ns ## KEGG: CCV52592_0022 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 4 112 9 126 126 66 38.0 4e-10 MNFKIYFGIIAALIFTCLALAGWNHSLKNTIEQLNKDIVFAKTQEIISSSNLQACNAKID LQNERIKNMEVKNIKEVEQKVVTKFEKIKEPINGECQNKVKFYEELINEMAR >gi|257443928|gb|ACYG01000001.1| GENE 8 4093 - 4623 485 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458663|ref|ZP_05623790.1| ## NR: gi|257458663|ref|ZP_05623790.1| hypothetical protein CAMGR0001_2766 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2766 [Campylobacter gracilis RM3268] # 1 176 1 176 176 293 100.0 4e-78 MFWILNRLRGQYSYFAKINALVVALLIFAFYGNFFIAIVCGLGYLAGEAKGWGVWVGALT SHGADKGERESRGIEWLAGRFIPRAHWLAFCRVCLFLRGLIWWLPVFAPLVFVGIYGAPL LAVALAAGFPLACELGYRTNFKFRLKKLEIESAWARQEIFYGAMQDIAFLILWMAL >gi|257443928|gb|ACYG01000001.1| GENE 9 4626 - 4880 203 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458664|ref|ZP_05623791.1| ## NR: gi|257458664|ref|ZP_05623791.1| hypothetical protein CAMGR0001_2767 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2767 [Campylobacter gracilis RM3268] # 1 84 1 84 84 172 100.0 9e-42 MSYFLIFILAFILGILACPIVIFLRARKCGGWDHSNMMNIFRVIAHLATHPDDFAKFRYE DGSRPFWYLGSDEFADVVKSRPKE >gi|257443928|gb|ACYG01000001.1| GENE 10 4877 - 5527 823 216 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0024 NR:ns ## KEGG: CCV52592_0024 # Name: dhs # Def: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase # Organism: C.curvus # Pathway: not_defined # 93 216 57 181 186 121 50.0 2e-26 MKIYNYDGVSGEYIGQSEAQKSPLEEGAYLIPANATDTQPLASKKGFAVCFKEGAWQYVK DERGVIYYDENNREVKITSLGQDTSGLRETPKEPPIEQLREAKTAELAAWTHSMGDSCKI NLKDFGVINGGYRYLLNVEAMIDTFDSLEIRAFRMYDNTMKKIGGQEELKRIKKAIQIGG QKLHALKWQYELKISKAKDKKELDAIVFTDTIEVAL >gi|257443928|gb|ACYG01000001.1| GENE 11 5538 - 6713 821 391 aa, chain - ## HITS:1 COG:RSc1921 KEGG:ns NR:ns ## COG: RSc1921 COG5301 # Protein_GI_number: 17546640 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Ralstonia solanacearum # 212 391 372 554 554 102 37.0 2e-21 MVSIYELKLGAEKLEILKALSAEIEKVIASIGKIDNSRLNTIYNDILEKANQVLQDKNFV QELKDKVDVAHKDISEKAASINQKFEQQQALQQSLQELKVKIEALIKSNLIDDTAPKATA TYSSEKIGELLQLKLNKTDQAADSAKLGGVVASDFMKKSEYSPTSNSLANTLVLRDANGD FAGKYVTAGHFKLTAPVQNNIFSKNNEILFRVGAADNDNYTRAVSFSLLSSTILPVGTII TSARTPAPDGFLLCNGAAISRSAYTDLFSAIGTAYGAGDGSSSFNIPDLRGEFIRGADNG RGVDGGRALGSAQGDAIRNITARAIGMGDRNSIPTLLGALYGIQKSTRIESVGDVLGDGG YFEWGFDASKVVPVANENRPRNVAVNFYIKY >gi|257443928|gb|ACYG01000001.1| GENE 12 6716 - 6856 82 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEEGFNTALLNAEAISDIDILELLRVLAERLKIINALIAASILKG >gi|257443928|gb|ACYG01000001.1| GENE 13 6849 - 7232 374 127 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0027 NR:ns ## KEGG: CCV52592_0027 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 6 123 6 126 129 153 63.0 2e-36 MTSKFAKEFLAHKVVGGKKMPPDEILSEMFLEAMLWTANKCTPSELLRSVESERVYRNVA NGFYITYPDKPNFSNEKEHIMIDESLTYAVINYVAFIINQDAFYRDLALEIISDYIANDG KERIFDD >gi|257443928|gb|ACYG01000001.1| GENE 14 7232 - 8218 956 328 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0028 NR:ns ## KEGG: CCV52592_0028 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 326 1 326 327 444 70.0 1e-123 MAITSTGFQAPATKREGLKPSVYDSIILIGADDTPVLSLIGTSNVTNTEHSWLTDNIAAP KKNAQLEISDFADDRKSTIQKTTNSVQIFTTNISVSYTMQKVATYGGKEMERETTKRAKE HKRDMEYALFGLGRDTDTKVSIFKAPTSRADTVAGEMAGMFYYISKGESAFVNGRRGNVL AFDSKNDWTGTPTVLTEDALNKILQNIWDAGATPRDVFIGAKLKKAINAFATRQFGNEKS INSSVVSLDTDFGKVNFRLHRYLSEQNKLDDVLIAGDFSFMKNGLLIPTMIENVTTSKTA KQKRYYTEATLEVRNADAFAIGVGLKVK >gi|257443928|gb|ACYG01000001.1| GENE 15 8410 - 9957 1200 515 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458671|ref|ZP_05623798.1| ## NR: gi|257458671|ref|ZP_05623798.1| hypothetical protein CAMGR0001_2774 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2774 [Campylobacter gracilis RM3268] # 1 515 1 515 515 857 100.0 0 KNAGDLEGTIKNIEAIPTEGLDSATKDGLNKFVKEVVPEIRQILKTQEDDAVRAKFNPEE LKKALMDPNLTTQEKVNLVEMAKKQIKEELDKKAAKVAKGELVKQGEGFTMKEGRTDYPD RAKFELGKYLKENLKLNDNPITASLNYLFNHHREMFTNRRAVYDLIKNVLDDMPEVIEKR ADGGYYLARSLKHDKSNSKSKMADLVLDEQEAENYIKHANLRSYSPKMREVMDKKIIADS KDTPLLTHRSESARVLGDNVLSARPGSNELLSASHGSIIPQSSQKVKELSPADLRKAIIN AKDDKERLAIIENQKTGIKQRIENEAAGDKTADKLAKEAQGLADNKPVEKKFTLETIKSF DPRKHGHAYLSKISFNDRKPVREFIDSNTRMWDSRRKYYETSYTFNAKEGDMFEARLDDG SWKSDTKEYYIVKKDDKGELYLSKAKDLSDLQKEAIKEAETKSEWESKISSSTDAIKLNK IMRDIEHTEAITPKNRAKLYVAITNRLKELREAER Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:32:07 2011 Seq name: gi|257443924|gb|ACYG01000002.1| Campylobacter gracilis RM3268 contig00053, whole genome shotgun sequence Length of sequence - 683 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 56 - 91 -0.6 1 1 Tu 1 . - CDS 300 - 614 313 ## gi|257458675|ref|ZP_05623801.1| hypothetical protein CAMGR0001_2777 Predicted protein(s) >gi|257443924|gb|ACYG01000002.1| GENE 1 300 - 614 313 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458675|ref|ZP_05623801.1| ## NR: gi|257458675|ref|ZP_05623801.1| hypothetical protein CAMGR0001_2777 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2777 [Campylobacter gracilis RM3268] # 35 104 1 70 70 139 100.0 1e-31 MIATLIGCLFFISVVTVVNPIEPKNFRLLPFALVMFFIRRKQQKGVYFVFNDSDIKYYKE DKAYKSLKLEQIGAVAISFDPRWDRRQRISIPEMMFLSLWPLGA Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:32:15 2011 Seq name: gi|257443919|gb|ACYG01000003.1| Campylobacter gracilis RM3268 contig00023, whole genome shotgun sequence Length of sequence - 3063 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 143 - 188 2.0 1 1 Tu 1 . - CDS 218 - 637 660 ## COG1607 Acyl-CoA hydrolase - Prom 659 - 718 5.1 + Prom 601 - 660 4.9 2 2 Tu 1 . + CDS 823 - 2637 2116 ## CHAB381_1368 invasion antigen B Predicted protein(s) >gi|257443919|gb|ACYG01000003.1| GENE 1 218 - 637 660 139 aa, chain - ## HITS:1 COG:Cj0915 KEGG:ns NR:ns ## COG: Cj0915 COG1607 # Protein_GI_number: 15792244 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Campylobacter jejuni # 6 139 1 134 137 190 66.0 7e-49 MSDLNLDDFGEPRIKVVALPKDTNSSGNIFGGWILSQIDLAGATAAREIAPERVVTISMQ EVTFKQPVFIGDVISCYAKVLSVGNTSIRVQIEVAALRLGEDGFRECLHVTSAIAIYVSV TKSGQKKPISAEIKRLHGF >gi|257443919|gb|ACYG01000003.1| GENE 2 823 - 2637 2116 604 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1368 NR:ns ## KEGG: CHAB381_1368 # Name: not_defined # Def: invasion antigen B # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 603 1 603 606 758 60.0 0 MNDFAKLNEMAASAKARLNALYDEPHAELITRGLEICGFESGDTARIAVLRRIVDLKEDP LLQEFRRLGYDEARQRELKSKMYDFTREIHEGMHAALIAEAGAQGILQPFYLELLKGVHR IGLVLSDTQKSWQALIIEGTNKRWEKEFSSLAQAKEFLLQEELFMRTPHGEICERCYGAV VQRDGKPQMVPYAVAFADETAKLQSEFSDLLERLVTLAEDESELAYVAYLSKLKQAFCER DSNAVIGAWRDAEIAWMDIKTPLQIGHPLEYYEDAYTHAVALEWDVRLAGAYEFNAEEFK ARVSESFERAYEKIGANNAVMHSLVLSNIAKTQLYVCAPLIYYGADLNGLFSAQVVPNDE FVSTNCGKKIFAFVNFVYESAKARPFMRLSSEIFDLEYLNFGREILFKKPQIWRRVYEIS TIGHEFGHIFFIDADTEARMNRSGLFKLIEEYKATTGGLVSFFFHEEEEFCLPVLDELIR RAVGLIAWQQVEELKPYYCEALIHLSLLFASGVLKFERGHLAVKFDRAGYESFKAACLQN YEELARLYCDKKDAAEFLSRFAELSGGVYLPREAQVREFVEFYYSRYEAIGNETDPSNER AKWL Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:33:07 2011 Seq name: gi|257443870|gb|ACYG01000004.1| Campylobacter gracilis RM3268 contig00006, whole genome shotgun sequence Length of sequence - 27366 bp Number of predicted genes - 42, with homology - 41 Number of transcription units - 16, operones - 6 average op.length - 5.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 36 - 584 256 ## PROTEIN SUPPORTED gi|52841322|ref|YP_095121.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase - Term 935 - 984 -1.0 2 2 Op 1 . - CDS 1001 - 2086 1175 ## COG0498 Threonine synthase 3 2 Op 2 . - CDS 2095 - 2481 583 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 2528 - 2587 11.6 + Prom 2524 - 2583 10.8 4 3 Tu 1 . + CDS 2603 - 3340 793 ## COG2964 Uncharacterized protein conserved in bacteria 5 4 Tu 1 . - CDS 3513 - 5552 1661 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 5698 - 5757 6.1 6 5 Op 1 2/0.400 - CDS 6057 - 6815 742 ## COG0024 Methionine aminopeptidase 7 5 Op 2 53/0.000 - CDS 6816 - 8081 870 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 8 5 Op 3 10/0.000 - CDS 8081 - 8482 542 ## PROTEIN SUPPORTED gi|154148588|ref|YP_001405715.1| 50S ribosomal protein L15 9 5 Op 4 56/0.000 - CDS 8495 - 8944 653 ## PROTEIN SUPPORTED gi|229531361|ref|ZP_04420746.1| SSU ribosomal protein S5P 10 5 Op 5 46/0.000 - CDS 8954 - 9310 462 ## PROTEIN SUPPORTED gi|118475606|ref|YP_891260.1| 50S ribosomal protein L18 11 5 Op 6 55/0.000 - CDS 9321 - 9857 768 ## PROTEIN SUPPORTED gi|154148630|ref|YP_001405712.1| 50S ribosomal protein L6 12 5 Op 7 50/0.000 - CDS 9935 - 10330 588 ## PROTEIN SUPPORTED gi|118475769|ref|YP_891258.1| 30S ribosomal protein S8 13 5 Op 8 50/0.000 - CDS 10340 - 10525 308 ## PROTEIN SUPPORTED gi|154149067|ref|YP_001405710.1| ribosomal protein S14p/S29e 14 5 Op 9 48/0.000 - CDS 10527 - 11072 801 ## PROTEIN SUPPORTED gi|157164844|ref|YP_001467708.1| 50S ribosomal protein L5 15 5 Op 10 57/0.000 - CDS 11075 - 11308 308 ## PROTEIN SUPPORTED gi|118475687|ref|YP_891255.1| 50S ribosomal protein L24 16 5 Op 11 50/0.000 - CDS 11308 - 11676 582 ## PROTEIN SUPPORTED gi|154148791|ref|YP_001405707.1| 50S ribosomal protein L14 17 5 Op 12 . - CDS 11676 - 11927 378 ## PROTEIN SUPPORTED gi|154148095|ref|YP_001405706.1| 30S ribosomal protein S17 18 5 Op 13 . - CDS 11937 - 12119 231 ## PROTEIN SUPPORTED gi|154174435|ref|YP_001409146.1| 50S ribosomal protein L29 19 5 Op 14 50/0.000 - CDS 12106 - 12531 633 ## PROTEIN SUPPORTED gi|154148600|ref|YP_001405704.1| 50S ribosomal protein L16 20 5 Op 15 61/0.000 - CDS 12534 - 13229 1079 ## PROTEIN SUPPORTED gi|118474301|ref|YP_891250.1| 30S ribosomal protein S3 21 5 Op 16 59/0.000 - CDS 13230 - 13562 493 ## PROTEIN SUPPORTED gi|154149283|ref|YP_001405702.1| 50S ribosomal protein L22 22 5 Op 17 60/0.000 - CDS 13572 - 13853 474 ## PROTEIN SUPPORTED gi|223038334|ref|ZP_03608628.1| ribosomal protein S19 23 5 Op 18 61/0.000 - CDS 13856 - 14686 1313 ## PROTEIN SUPPORTED gi|223038451|ref|ZP_03608745.1| ribosomal protein L2 24 5 Op 19 61/0.000 - CDS 14688 - 14969 387 ## PROTEIN SUPPORTED gi|118474455|ref|YP_891246.1| 50S ribosomal protein L23 25 5 Op 20 58/0.000 - CDS 14971 - 15585 852 ## PROTEIN SUPPORTED gi|154148894|ref|YP_001405698.1| 50S ribosomal protein L4 26 5 Op 21 40/0.000 - CDS 15582 - 16160 796 ## PROTEIN SUPPORTED gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 27 5 Op 22 . - CDS 16172 - 16483 495 ## PROTEIN SUPPORTED gi|118475131|ref|YP_891243.1| 30S ribosomal protein S10 - Prom 16580 - 16639 7.2 + Prom 16563 - 16622 9.8 28 6 Op 1 . + CDS 16762 - 18102 1170 ## COG1373 Predicted ATPase (AAA+ superfamily) + Prom 18106 - 18165 3.3 29 6 Op 2 . + CDS 18186 - 18521 373 ## gi|257458712|ref|ZP_05623836.1| hypothetical protein CAMGR0001_0654 + Prom 18535 - 18594 3.8 30 7 Tu 1 . + CDS 18626 - 18787 115 ## gi|257458713|ref|ZP_05623837.1| hypothetical protein CAMGR0001_0655 + Term 18844 - 18874 0.4 - Term 18509 - 18543 2.3 31 8 Tu 1 . - CDS 18722 - 18922 61 ## - Prom 19115 - 19174 5.1 32 9 Tu 1 . + CDS 19149 - 19325 63 ## gi|257458715|ref|ZP_05623839.1| hypothetical protein CAMGR0001_0657 - Term 19474 - 19539 2.1 33 10 Tu 1 . - CDS 19653 - 20531 913 ## COG0253 Diaminopimelate epimerase - Prom 20578 - 20637 3.2 34 11 Op 1 . - CDS 20709 - 21629 1013 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Term 21663 - 21694 1.1 35 11 Op 2 . - CDS 21698 - 22372 560 ## COG0237 Dephospho-CoA kinase - Prom 22414 - 22473 7.3 + Prom 22361 - 22420 6.1 36 12 Op 1 . + CDS 22446 - 23429 819 ## PROTEIN SUPPORTED gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 + Term 23437 - 23465 0.7 37 12 Op 2 . + CDS 23474 - 23833 364 ## CCC13826_1047 putative putative periplasmic protein 38 13 Tu 1 . - CDS 23895 - 24341 694 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 24368 - 24427 2.8 39 14 Op 1 . - CDS 24715 - 25044 215 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 40 14 Op 2 . - CDS 25131 - 25274 144 ## CCC13826_1907 general stress protein 14 (GSP14) (EC:1.6.99.-) - Prom 25313 - 25372 3.0 41 15 Tu 1 . - CDS 25395 - 26054 954 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit - Term 26183 - 26221 0.0 42 16 Tu 1 . - CDS 26230 - 27138 1102 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 27166 - 27225 3.8 Predicted protein(s) >gi|257443870|gb|ACYG01000004.1| GENE 1 36 - 584 256 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|52841322|ref|YP_095121.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] # 12 170 168 334 601 103 35 2e-21 MSNKLLSMSLQELWQLFPIRLVPHDPRWSEYFRQERKILRGLLRDPDEIEIHHIGSTAVS GIWAKPIVDILIECSDIAAAKRRLIDAGYLLMSESESRCSLNKGYTEAGFAERVFHVHLR NFGDTDEIFFRDFLRANADIAEQYEALKLELCKRYEFDRDAYTAAKSEFVLKFTRIAKEN SK >gi|257443870|gb|ACYG01000004.1| GENE 2 1001 - 2086 1175 361 aa, chain - ## HITS:1 COG:Ta0495 KEGG:ns NR:ns ## COG: Ta0495 COG0498 # Protein_GI_number: 16081612 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Thermoplasma acidophilum # 66 360 44 333 334 190 39.0 5e-48 MSDFICTGCGKHAPIDTLSYKCDCGGLYKLNSDAPKFNPALVDQSEFSIFRYRRFMGIDT AKFREISMGEGLTTSVKFGENLYLKLDYAMPTLSFKDRGAAVLVLHAKNIGVKKVLQDSS GNAGNAVAAYCARAGIECEIYVPKGTSPKKIDMIKSHGAHVTVFDGSRDETADACRKKAA QEQIYYANHVYNPIFYEGTKSYIYEIYEQLGRVPRNIFIPVGNGTLLLGAQAALGELYEG GLIEALPKIFIVQGERCAPLFDAKGAAREIEPQPTLAEGIAIARPMRAREILGSSYAGER EVILASEGDILPARAALARGGFYVEHTTAATYAAYLRYKESHDLQGDSIIPLCGAGLKSD H >gi|257443870|gb|ACYG01000004.1| GENE 3 2095 - 2481 583 128 aa, chain - ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 1 122 12 134 137 77 38.0 5e-15 MKEIYPSDFAPKKAHYAPGILDDDGTLYVSGQLSVDPRTGAAPEGLAAQTAQALGNVAAV LAAAGADKSDVRMCRVYTPDVANWDVIDEQYALFFGAHKPARVVVPTTALHFGCLVEIEA VAKIKEKK >gi|257443870|gb|ACYG01000004.1| GENE 4 2603 - 3340 793 245 aa, chain + ## HITS:1 COG:VC0355 KEGG:ns NR:ns ## COG: VC0355 COG2964 # Protein_GI_number: 15640382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 11 244 30 236 240 65 25.0 9e-11 MKFQEPELNQLLQTFIPTAHLIKNTIGDCEVVIHDMSTPQSSVVFVLGDVTGRRIGQSFD HLVKDVLLSKNFENDCTANYYFTAQNGKLIRSSTSLIRGADGKVVGALCVNIDTSSAMAA YKAIKDLLPNAKLDSKELQGANFTDGSCNSAALDGASLKDGINLETQSSNDSQQNILDIV QDLIASATHDLDVEGMKKEDRKRIVKFLVQKGIFEVKGAVELVAKALKTQKVTIYSYMDE VKKEG >gi|257443870|gb|ACYG01000004.1| GENE 5 3513 - 5552 1661 679 aa, chain - ## HITS:1 COG:HP1417m KEGG:ns NR:ns ## COG: HP1417m COG2194 # Protein_GI_number: 15646209 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Helicobacter pylori 26695 # 346 659 228 543 556 179 36.0 2e-44 MREKFYVALANIGGLMARTKVGELVARLLMKIDRGFFTALRERPIWRVFWLSTALCLLAC WAKIHYQINGPIFAYIAESFPVVFIVNLLIFHLCYLLSGRFFKLVSVVLLVLITLIASVA LFLIVNFDSSFNVVAIDALVHTDAAETSEFISQFLNFATILYLAVLLGCIFAALRAGRRK EEQTHSGLRLLLAAIYLIYGTIFCADIAVKASQGKQGYITKLSQYVPLEFAFTIKDYLSD KNFITDMREVQLGYEEAKRANESVLKGGANSDPQGAALDSASENSAPASSAQAQNYGANF NSTFASGTEPQSSSETLNSTPQSPSAILNSKNPEAATNPALQKSRVKNIILIIGESLQRG HMSLYGYDVKNTPLLEKLEASGNLIKFSDTISPYGTTNQVLMRLLNFSDYESERKRAWFR NLSIIDMFKLSGYRTFWISNQEAFGAHALSAKSAADRADAESFLSKSNLYETVRIKPDGV LLPLINRAKAGQSERNFYVIHLIGSHMDYSLRYPEGFGKFSAADVKAKLTAKQKDVVAYY DNSVLYNDFVINEIFKIFSGDDSLIVYLSDHGENLYENGRLGHGMESRFTYEIPLLFIAS REFLSDHATLWQRLAAAKDKPFMSDDLAHLLADIIGVAPLEFDEHKSPIRADFNASRKRI ANGADYDEKLKNTKGYEFE >gi|257443870|gb|ACYG01000004.1| GENE 6 6057 - 6815 742 252 aa, chain - ## HITS:1 COG:HP1299 KEGG:ns NR:ns ## COG: HP1299 COG0024 # Protein_GI_number: 15645912 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Helicobacter pylori 26695 # 1 250 1 251 253 328 62.0 4e-90 MAILLKTKKDLEGLRAANKIVAQALDYAASFIKPGLSLLEVDKKIDDFITSKGAYPAFKG LYGFPNAACLSLNEVIIHGIPDETILQEGDILGVDLGSKLNGYFGDSARTLPVGKISKAD EDLIACSKDTLEFAIKTIRVGMHFKELSFEIEKFIRARGFVPLYGFCGHGIGKHPHEEPE IPNYLEGNNPKSGPKIKNGMVFCIEPMICQKDGTPVIAEDKWSTRSKDGLRTSHYEHCMA VFDDKVEVLSVA >gi|257443870|gb|ACYG01000004.1| GENE 7 6816 - 8081 870 421 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 5 416 23 436 447 339 42 1e-92 MNKSLRNKILITLGFLFAYRLLAYVPVPGVDVEVIKQFFQNNSNNAFGMFNMFSGNAAER FSVISLGIMPYITASIIMELLAATFPNLGKLKKERDGMQKYMQIIRYATIAIAMVQSIGV SIGLQGIHGQTGAPAIMAENTNEFVFISCISMLAGTMLLMWIGEQITQRGVGNGTSLIIF AGIVSAIPRAIGSTVNLVNTGEMNVLKLIAILLIILATIGAILYVELGERRIPVSFSRKV LMANQNKRIMNYVPIKLNLSGVIPPIFASAILMFPTTILQASTNPIIQKIHDFLSPSNYF FNFLTFVLVIFFAYFYASIAFNSKDISENLKKQGGFIPGIRPGEGTASFLNEVASRLTFW GSIYLGLVTVIPWLLVKFMGVPFYFGGTSVLIVVSVALDTMRRIEAQIYMNKYQTLSAVG L >gi|257443870|gb|ACYG01000004.1| GENE 8 8081 - 8482 542 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148588|ref|YP_001405715.1| 50S ribosomal protein L15 [Campylobacter hominis ATCC BAA-381] # 1 133 1 133 133 213 80 1e-54 MGLENLKKAPGSTHATKRLGRGQGSGLGKTAGRGGKGQTARTGSHEKRGFEGGQQPIQRR LPKVGFTSKFEKPYVINVDKIEAIKDLSEITIESIKSVHKISNSVKKIKLIGVGAKALAS KIKDENVKSSGQK >gi|257443870|gb|ACYG01000004.1| GENE 9 8495 - 8944 653 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229531361|ref|ZP_04420746.1| SSU ribosomal protein S5P [Sulfurospirillum deleyianum DSM 6946] # 3 148 1 146 147 256 84 1e-67 MIVEKYNREEFEEVIVNIGRVTKVVKGGRRFRFTALIVVGNRNGLVGFGFGKSKEVPDAI KKAVDDAFKNIIKVNLNGSTITHDIEVKYNASKILLKPASEGTGVIAGGSVRPVLELAGV KDILTKSLGSNNSSNVVRATMKALSMLKH >gi|257443870|gb|ACYG01000004.1| GENE 10 8954 - 9310 462 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118475606|ref|YP_891260.1| 50S ribosomal protein L18 [Campylobacter fetus subsp. fetus 82-40] # 1 118 1 118 118 182 76 2e-45 MTQNVLKRKISLRIKRKRRIRAKISGVASCPRISIFKSNRTVYAQAIDDAASATLCASSG KVLNLKANKEGAASLAKDLASKLKDKGISEAIFDRNGYLYHGVIASFAESLRQNGIKL >gi|257443870|gb|ACYG01000004.1| GENE 11 9321 - 9857 768 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148630|ref|YP_001405712.1| 50S ribosomal protein L6 [Campylobacter hominis ATCC BAA-381] # 1 178 1 178 178 300 80 7e-81 MSRIGKKPISIPNGLEVKIDGSSLKFKKSNNEKELDLKGHVDVKIEDGKIEFSPKGEDRQ SRAYWGTYRALANNIVLGLTEGFSKQLEINGVGYRAAMKGKVLELNLGFSHPINFESPKG IEIFVDKNVVTIKGDDKQQVGQVAAEIRGFRPPEPYKGKGIKYLEEHIIRKAGKTAKK >gi|257443870|gb|ACYG01000004.1| GENE 12 9935 - 10330 588 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118475769|ref|YP_891258.1| 30S ribosomal protein S8 [Campylobacter fetus subsp. fetus 82-40] # 1 131 1 131 131 231 85 5e-60 MINDLISDGLTRIRNAAMRRLDTTKLFHSNVVEAMLKILAEKGYIESYNVVEENNKKIIN VVLKYDEKGRSVINEVKRISTPGRRVYQGKDEIKRFKNGYGTVVVSTSKGVMSGIDAHKA GVGGEVLCTIW >gi|257443870|gb|ACYG01000004.1| GENE 13 10340 - 10525 308 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154149067|ref|YP_001405710.1| ribosomal protein S14p/S29e [Campylobacter hominis ATCC BAA-381] # 1 61 1 61 61 123 90 1e-27 MAKKSMVAKAKRPAKFSTRAYTRCQICGRPHSVYKDFGICRVCLRKMANEGLIPGLKKAS W >gi|257443870|gb|ACYG01000004.1| GENE 14 10527 - 11072 801 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164844|ref|YP_001467708.1| 50S ribosomal protein L5 [Campylobacter concisus 13826] # 1 181 1 181 181 313 85 1e-84 MSRLKDKYANSIRAALQKEFDIKNPMLIPALEKIVISVGTGESSKDQKVLQNMADTISLI AGQKALIVNAKKSVAGFKVREGFPVGIMVTLRKEQMFAFLDKLISIALPRVKDFRGLPRT GFDGRGNYNFGLQEQLMFPEVEYDQILKTHGMNITVVTTTNNDKEAFKLLELFGMPFAKG K >gi|257443870|gb|ACYG01000004.1| GENE 15 11075 - 11308 308 77 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118475687|ref|YP_891255.1| 50S ribosomal protein L24 [Campylobacter fetus subsp. fetus 82-40] # 1 77 1 77 77 123 77 1e-27 MAVKFKIKKGDQVKIIAGDDKGKTGTVKAVFPKKAQVIVEGCKMAKKAIKPTEQNPQGGF TSKEMPMDISNVALVEG >gi|257443870|gb|ACYG01000004.1| GENE 16 11308 - 11676 582 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148791|ref|YP_001405707.1| 50S ribosomal protein L14 [Campylobacter hominis ATCC BAA-381] # 1 122 1 122 122 228 94 2e-59 MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATIGDIIVCSVKKALPNGKIKRGQVVKA VVVRTTKELHRGNGSLIRFDENAAVILDSKKEPIGTRIFGPIGREVRYGGFMKIVSLAPE VL >gi|257443870|gb|ACYG01000004.1| GENE 17 11676 - 11927 378 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148095|ref|YP_001405706.1| 30S ribosomal protein S17 [Campylobacter hominis ATCC BAA-381] # 1 83 1 83 83 150 86 1e-35 MAFKREIQGVVVKKAGDKTATVLVERRVMHPRYRKIVKRFKKYLIHDENNVVKIGDTISA IECRPLSARKSFRLKAVLKTGVE >gi|257443870|gb|ACYG01000004.1| GENE 18 11937 - 12119 231 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154174435|ref|YP_001409146.1| 50S ribosomal protein L29 [Campylobacter curvus 525.92] # 1 59 1 59 61 93 74 1e-18 MKYTDLKDKDLAELNSMLKQSKLLLFTARQKLKTMQLSNPNEIRAIKKDIARINTAIKAK >gi|257443870|gb|ACYG01000004.1| GENE 19 12106 - 12531 633 141 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148600|ref|YP_001405704.1| 50S ribosomal protein L16 [Campylobacter hominis ATCC BAA-381] # 1 141 1 141 141 248 83 3e-65 MLMPKRTKYRKMMKGRNRGYATRGNSLTFGDFGIKAVEAGRVNSRQIEAARVAMTRFVNR QAKIWIKVFPDKPLTKKPLQTRMGKGKSGVEEWVMNIKPGRIIFEMTGVSEEVAKEALML SIHKLPFKTKIVSRESENEIY >gi|257443870|gb|ACYG01000004.1| GENE 20 12534 - 13229 1079 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118474301|ref|YP_891250.1| 30S ribosomal protein S3 [Campylobacter fetus subsp. fetus 82-40] # 1 231 1 232 232 420 90 1e-117 MGQKVNPIGLRLGINRNWESRWFPSKATLSESIGEDYKIRKFLKAKLYYAGISQILIERT AKKIRVTIVAARPGIIIGKKGGEVENLRSEVVKLVNKDIAINIKEERKVGSNALLAAENV AMQLERRVAFRRAMKKVIQGAQKAGAKGIKICVAGRLGGAEMARTEWYLEGRVPLHTLRA RIDYGFAEAHTTYGNIGIKVWIFKGEILQKGIQAEKTDDAPKKTRRPRRGK >gi|257443870|gb|ACYG01000004.1| GENE 21 13230 - 13562 493 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154149283|ref|YP_001405702.1| 50S ribosomal protein L22 [Campylobacter hominis ATCC BAA-381] # 1 108 1 108 109 194 90 5e-49 MSKSTIKFVRLSPTKARLIAKQIQGMNAEFALATLEFTPNRGAKYIATAISSAVANGGFE PEEVVVTSCRVDAGPVLKRFRPRARGTASRIRKPTSHIIVEVAKPSKKEA >gi|257443870|gb|ACYG01000004.1| GENE 22 13572 - 13853 474 93 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223038334|ref|ZP_03608628.1| ribosomal protein S19 [Campylobacter rectus RM3267] # 1 93 1 93 93 187 95 8e-47 MARSLKKGPFVDDHVMKKVVAAKKAGDNKPIKTWSRRSTIVPEMIGLTFNVHNGKNFIPV YVTEHHIGYKLGEFAPTRTFKGHKGSVQKKIGK >gi|257443870|gb|ACYG01000004.1| GENE 23 13856 - 14686 1313 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223038451|ref|ZP_03608745.1| ribosomal protein L2 [Campylobacter rectus RM3267] # 1 276 1 276 276 510 89 1e-144 MAIKTYKPYTPSRRFMTGLSSEDITAKASVRGLLVKIPAAAGRNNNGRITSRHKQAGAAK LYRIIDFKRNKFGVPGKVEAIEYDPNRNCRIALISYADGEKRYIIKPNDLNVGDVVAAAE GGLDIKPGNAMKMKNIPVGTILHNIELKPGKGAQMARSAGSYAQLMGKEEKYVILRLPSG EMRRVLAECMASIGVVGNEEWANVVIGKAGRNRHRGIRPQTRGSAMNPVDHPHGGGEGKK NSGRHPVTPWGKPTKGYKTRHKKASDKLIISRRKGK >gi|257443870|gb|ACYG01000004.1| GENE 24 14688 - 14969 387 93 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118474455|ref|YP_891246.1| 50S ribosomal protein L23 [Campylobacter fetus subsp. fetus 82-40] # 1 93 1 93 93 153 78 1e-36 MADITDIKTILYTEKSLGLQENGVVVIQTSPSVTKNGLKSVLKNYFGITPLKINSLRQDG KVKRFRGKMGARNDVKKFYVKLPEGASLESMEA >gi|257443870|gb|ACYG01000004.1| GENE 25 14971 - 15585 852 204 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148894|ref|YP_001405698.1| 50S ribosomal protein L4 [Campylobacter hominis ATCC BAA-381] # 1 203 1 203 204 332 81 1e-90 MSKVSVLNEKLEKASEIEIPAKFSEVNSHNLYLYVKSYLASLRANTANAKTRAEVSGGGK KPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYEQKVNKKQKRLALEFAINEKANEG KIFIFDDLELKSGKTKDAANFIKKLGVRDALIVKNELDAQTLLAYRNLKNCYVIDASEVN AYLIAVYGSVVFEKAAFESIVKED >gi|257443870|gb|ACYG01000004.1| GENE 26 15582 - 16160 796 192 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 [Campylobacter hominis ATCC BAA-381] # 1 192 1 191 191 311 78 4e-84 MEYIVEKIGMSRTIDTSSTPVTLLRLINTKICEVCDEKKAIVAYADGKAYNKAIAGIQKK YSLSKEFNKFATLSLENAELGDQNLDVLSEAKIVKVSFRSKGKGYQGVIKRHGFAGGPAA HGSRFHRRPGSIGNCEWPGRVQPGMRMAGHTGNETITAKNEVVSFDAENKILVLKGSVPG FNGAMGRIRIVK >gi|257443870|gb|ACYG01000004.1| GENE 27 16172 - 16483 495 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118475131|ref|YP_891243.1| 30S ribosomal protein S10 [Campylobacter fetus subsp. fetus 82-40] # 1 103 1 103 103 195 94 3e-49 MQKIRLKLKAYDHRVLDRTVSAIVEAVKRTGADVRGPVPMPTKIKRYTVLRSPHVNKDSR EQFEMKIHARMLDIVAATPDTVDSLTKLDLAPEVNVEVHAMGK >gi|257443870|gb|ACYG01000004.1| GENE 28 16762 - 18102 1170 446 aa, chain + ## HITS:1 COG:Cj1533c KEGG:ns NR:ns ## COG: Cj1533c COG1373 # Protein_GI_number: 15792841 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Campylobacter jejuni # 138 446 59 345 345 119 33.0 1e-26 MNDLKFFYENPPEFAGFIPRKRGIDSPKTIIYGVLNSGKSAVLKNEISELKKDEILYLNL ADLRLEEAVANDAIFVARNSADNTRASEANEYEISREATLDADMPSVDEIYRAAVKNTDT KNAKNASTGGSNNIKNAEFYSTKNRSENFFREIKEFLVANEQISSLFLDNFSSTDFEISS LQSFAGGLNLKRIIISTRDKELVLPGFERLELLPLSFEEFIAFDKRHNEINSMISAFLAQ GGGAKNPFIAPAEILEFEQRLLAANFSRTEILILKECLSSVHTAFSANKIYTALKPRIKI SKDAVYGTIAKLERENFIRFLSKAGEPTRAKKLYFSHFNMREILTSKKDFSKKFANVLFC ELLGLNTPIFYTKELDFYLPGLKMGVLVIPFSDADIIFLKFRKILSVLKKLGITSLKVVS MANSGRLEIEGIRCDVIPFHEFALSF >gi|257443870|gb|ACYG01000004.1| GENE 29 18186 - 18521 373 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458712|ref|ZP_05623836.1| ## NR: gi|257458712|ref|ZP_05623836.1| hypothetical protein CAMGR0001_0654 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0654 [Campylobacter gracilis RM3268] # 1 111 1 111 111 211 100.0 1e-53 MIKLKDKLIYETLKLVESQGEDGLLCRNKQSDAEFMRPVNEFATASGRNYTSIKSTLDII HKNWGYLQRESIKDTGLDAGKASKIFIYRLCEAGRSFIEKYEKTLVQNADK >gi|257443870|gb|ACYG01000004.1| GENE 30 18626 - 18787 115 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458713|ref|ZP_05623837.1| ## NR: gi|257458713|ref|ZP_05623837.1| hypothetical protein CAMGR0001_0655 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0655 [Campylobacter gracilis RM3268] # 1 53 1 53 53 66 100.0 6e-10 MLDFIVKMLAWKAEWEVKKEYDKEFGDLSSMRSILRFIILLVILGILAKIKYI >gi|257443870|gb|ACYG01000004.1| GENE 31 18722 - 18922 61 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MINSLASAKITTKIINFNKDFCRIATSIAMPNKTSAMSKNVSFMSLYIFYFSQNAKYDKK YYKAQD >gi|257443870|gb|ACYG01000004.1| GENE 32 19149 - 19325 63 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458715|ref|ZP_05623839.1| ## NR: gi|257458715|ref|ZP_05623839.1| hypothetical protein CAMGR0001_0657 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0657 [Campylobacter gracilis RM3268] # 1 58 1 58 58 97 100.0 3e-19 MSHFLLLVADFTRANTTEFHSCEHGGFFAVAAKFINRMSGLERKFYNAITLKFHRSLN >gi|257443870|gb|ACYG01000004.1| GENE 33 19653 - 20531 913 292 aa, chain - ## HITS:1 COG:Cj1531 KEGG:ns NR:ns ## COG: Cj1531 COG0253 # Protein_GI_number: 15792839 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Campylobacter jejuni # 1 287 1 246 249 223 43.0 4e-58 MKISKYNASGNDFVIFTDSVKADRSKLARELCDRRDGVGADGLIVVLPKFNGIEGINFEW EFYNSDGSSADMCGNGSRAVCMYAYENFLAAQSMKFLSGAGVISGEIFGIFGGNLSESMR GELRNVSFGEIFNLRPNAHALVANVEVMLTRPKRLGESFEEAGLTWYFYNTGVPHLVTFV SDLNEFDAVLARDLREKYNANVNYALVQSRLASKILKVRTFERGVEAETLACGTGMAACF IAGVENMGLASDIRVIPASGETLNLRLGDGGKIYFRGDVRHTFDGEFIGYVE >gi|257443870|gb|ACYG01000004.1| GENE 34 20709 - 21629 1013 306 aa, chain - ## HITS:1 COG:HP1098 KEGG:ns NR:ns ## COG: HP1098 COG0790 # Protein_GI_number: 15645712 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori 26695 # 79 306 25 251 290 130 36.0 3e-30 MRIGSRAQSGAKFQKFKSAPLKERLKFTARAVLLSALFATGAAAEIDDLRKSCAAGSEID CKKLSRVINELQRNCDAGGEENALDCANLGYAYDSNRSFRQAARYYDRACKLGEQKGCVY LGLLYNDGQGVTQDRKRANELFGDACKKNSSEGCASLAYNYKKGLGVYPDTKKAIELLIK ACKMGQVEACHNLGLSYVLGDGVKKDADRARTFFTRACEQGHADSCVNLGVTYFKGDGGQ KDHALAAKYFSEACEKSDEPLACSNLAYQYKKGWGVAKDKKRARELYEKACKLGRFDACE HLKAMR >gi|257443870|gb|ACYG01000004.1| GENE 35 21698 - 22372 560 224 aa, chain - ## HITS:1 COG:jhp0770 KEGG:ns NR:ns ## COG: jhp0770 COG0237 # Protein_GI_number: 15611837 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Helicobacter pylori J99 # 1 220 1 195 196 145 39.0 4e-35 MKFKHAVVITGSIGSGKSAVCELLAGRGFETIDADQISHCVLDHCTAQVAEIFGAQYVVQ KDAQAKNLSSHAESNANSVEEILSASRASVDRKKLGELVFKNPAELAKLEALLHPKIAAE ILSQAQALEAKEKIYFVDIPLFFEGKRYEFFDKVAVVYAPKDTLISRVMKRNGLDHAAAK HRVELQMDIEQKRAMADFVIDNGGDLAALKTAVERFLKELKDKI >gi|257443870|gb|ACYG01000004.1| GENE 36 22446 - 23429 819 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 [Marinobacter sp. ELB17] # 2 307 8 317 354 320 53 8e-87 MISYKDAGVDIDAGNDFVNAIKPFVKATQTPHVLGGIGSFSGAVRLPAGYKKPAILGATD GVGTKLRLAIDARKFEGVGQDLVAMCVNDLICNFAEPLFFLDYYATAKLETRDAKEVVKS IAEGCKLARCALIGGETAEMPSMYEKGDFDLAGFAVGIAEEDEIDRSKFVREGDVLIALP SSGLHSNGFSLARKVVAELGLKFDDKVGNRTLIDVLLEPTRIYVGDFLNLKDKIHALAHI TGGGIVENLPRVFPEGLGAKIEHAAIRTPEIFKIIAQKVEPAEMMRTFNMGVGMIVVAPK QNADFVLANTDGYVIGEVVKGQGAQLV >gi|257443870|gb|ACYG01000004.1| GENE 37 23474 - 23833 364 119 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1047 NR:ns ## KEGG: CCC13826_1047 # Name: not_defined # Def: putative putative periplasmic protein # Organism: C.concisus # Pathway: not_defined # 1 115 1 115 116 155 65.0 7e-37 MFRLNFKTGIVTTSKNSAENYYMIGLADDKYDYKNYLLFQRPIKLGRYEDADAPHNGLYA ECNGDICYNGCKAVKITSELIVFEVQDSVIDMDIHGVKIPKRFIQYCKEIFGDLLSIEG >gi|257443870|gb|ACYG01000004.1| GENE 38 23895 - 24341 694 148 aa, chain - ## HITS:1 COG:YPO1998 KEGG:ns NR:ns ## COG: YPO1998 COG1917 # Protein_GI_number: 16122240 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Yersinia pestis # 27 135 46 154 156 96 45.0 2e-20 MQNTQILVKKDELSVYDEVSDKIFAGGLPKVTLLFGATPYANAGAALVHFPRGVRTAWHT HPAGQNLIVTKGKIYTGTADGIVQIARAGDVVLCPPDVKHWHGAGLQEDGEHIAVTFEKD GKNVTWLEHLSEDEYKSLIEKADAKDAE >gi|257443870|gb|ACYG01000004.1| GENE 39 24715 - 25044 215 109 aa, chain - ## HITS:1 COG:CC0205 KEGG:ns NR:ns ## COG: CC0205 COG2249 # Protein_GI_number: 16124460 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Caulobacter vibrioides # 1 66 80 145 185 75 46.0 2e-14 MQKWLEDVFVHGFSHGRTGDKLRGKKLVISFTSGAPEEMYQKAGLQNYEIDEFLPPLKQT ANMCGMQFSGVVYSGGLSYQSRHDEEKLAVMHQKAILHAKRVAELVKNL >gi|257443870|gb|ACYG01000004.1| GENE 40 25131 - 25274 144 47 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1907 NR:ns ## KEGG: CCC13826_1907 # Name: not_defined # Def: general stress protein 14 (GSP14) (EC:1.6.99.-) # Organism: C.concisus # Pathway: not_defined # 1 42 1 42 186 69 83.0 4e-11 MSKILVVSGHTDLKNSFANKIILDELKRLLPEAKFDILSESFMQTTV >gi|257443870|gb|ACYG01000004.1| GENE 41 25395 - 26054 954 219 aa, chain - ## HITS:1 COG:XF1766 KEGG:ns NR:ns ## COG: XF1766 COG0599 # Protein_GI_number: 15838367 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Xylella fastidiosa 9a5c # 8 217 41 251 260 112 36.0 6e-25 MVNFNELPHAAKLNGALSDKQLALVSVAAYAAAGDADKLKGALQNALKAGLSVSQIREAL SHQSAYIGFPMGLNGLIVFNNLVKEREAAGIKDEAGKDASPVAADSDFYALGEQTQKYIF GSDYSGTVLFDAPAADHGLKAYLFGYLFSRDNLGFLEREIITVSTLAALNGVNMQLKSHL IGARNLGVTGEQFERIFKILGECVGEAKAQNARDVLKSL >gi|257443870|gb|ACYG01000004.1| GENE 42 26230 - 27138 1102 302 aa, chain - ## HITS:1 COG:mlr1595 KEGG:ns NR:ns ## COG: mlr1595 COG1028 # Protein_GI_number: 13471581 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 1 274 1 258 279 144 36.0 3e-34 MENQIWLITAATGGFGESLAKYALSRGDKVVATSRTMKKLNEKFGGESENFLPFELKFEG DLQAKFKALIEATQKKFGRIDNLVNNAGYGLLGIVEETGEADLRTQFEINVFAPFLLTQA ALKLMRPQAIKDGGSEEKVVARIFNLSSIGGFRTSGASTPYCMSKFAVSALSEGLNLELN QFGIRAINVMPTGFRTEFLGESLKTGAGAIKDYNEFRSATIEKFKAYNGKQPGNPATFGP VMFEISRQTMPAQYLFMGSSAFKNAEQKMALVMADMKDTRSIAGEAMDFKDATESAFDKR NK Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:34:05 2011 Seq name: gi|257443718|gb|ACYG01000005.1| Campylobacter gracilis RM3268 contig00044, whole genome shotgun sequence Length of sequence - 118057 bp Number of predicted genes - 118, with homology - 110 Number of transcription units - 59, operones - 26 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 53 - 116 -0.8 1 1 Op 1 . - CDS 119 - 631 437 ## COG3467 Predicted flavin-nucleotide-binding protein 2 1 Op 2 35/0.000 - CDS 632 - 1777 1527 ## COG0206 Cell division GTPase 3 1 Op 3 3/0.000 - CDS 1815 - 3182 1364 ## COG0849 Actin-like ATPase involved in cell division 4 1 Op 4 . - CDS 3175 - 4632 1427 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 4668 - 4727 7.9 5 2 Tu 1 . - CDS 4765 - 5325 620 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Prom 5304 - 5363 5.3 6 3 Tu 1 . + CDS 5390 - 6325 563 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis + Term 6365 - 6426 4.1 + Prom 6852 - 6911 5.4 7 4 Op 1 . + CDS 7068 - 7877 824 ## CHAB381_0817 hypothetical protein 8 4 Op 2 . + CDS 7867 - 8937 284 ## PROTEIN SUPPORTED gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 - Term 9806 - 9858 1.0 9 5 Tu 1 . - CDS 10019 - 10291 255 ## gi|257458743|ref|ZP_05623866.1| putative lipoprotein + Prom 10814 - 10873 8.6 10 6 Tu 1 . + CDS 10985 - 11350 356 ## CHAB381_1531 hypothetical protein + Term 11600 - 11633 2.1 11 7 Tu 1 . - CDS 11679 - 12791 1213 ## COG0585 Uncharacterized conserved protein - Prom 12814 - 12873 6.3 + Prom 12780 - 12839 5.6 12 8 Tu 1 . + CDS 12898 - 13935 1125 ## CHAB381_1008 hypothetical protein + Term 14145 - 14192 -0.1 13 9 Tu 1 . - CDS 14032 - 14286 167 ## gi|257458747|ref|ZP_05623870.1| hypothetical protein CAMGR0001_2332 - Prom 14311 - 14370 3.8 - Term 14337 - 14371 -0.6 14 10 Op 1 . - CDS 14388 - 14870 308 ## gi|257458748|ref|ZP_05623871.1| hypothetical protein CAMGR0001_2333 15 10 Op 2 . - CDS 14886 - 15362 352 ## gi|257458749|ref|ZP_05623872.1| hypothetical protein CAMGR0001_2334 16 10 Op 3 . - CDS 15378 - 15854 510 ## gi|257458750|ref|ZP_05623873.1| hypothetical protein CAMGR0001_2335 - Term 16130 - 16188 1.3 17 11 Op 1 . - CDS 16296 - 16982 736 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 18 11 Op 2 . - CDS 16963 - 18255 1484 ## CHAB381_0844 putative periplasmic protein 19 11 Op 3 23/0.000 - CDS 18249 - 18914 664 ## COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 20 11 Op 4 15/0.000 - CDS 18911 - 19147 389 ## COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 21 11 Op 5 1/0.222 - CDS 19151 - 19870 889 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 22 11 Op 6 . - CDS 19881 - 21197 1429 ## COG0793 Periplasmic protease - Prom 21297 - 21356 5.5 + Prom 21209 - 21268 6.5 23 12 Tu 1 . + CDS 21386 - 23995 1495 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 24002 - 24044 8.3 - Term 23988 - 24031 0.9 24 13 Tu 1 . - CDS 24063 - 24296 228 ## - Prom 24504 - 24563 5.9 - Term 25061 - 25110 1.3 25 14 Tu 1 . - CDS 25159 - 25404 273 ## CHAB381_1101 hypothetical protein - Prom 25508 - 25567 9.7 26 15 Tu 1 . - CDS 25766 - 26095 59 ## 27 16 Tu 1 . - CDS 26624 - 27076 128 ## gi|257458765|ref|ZP_05623888.1| hypothetical protein CAMGR0001_2350 - Prom 27103 - 27162 5.5 - Term 27083 - 27128 -0.6 28 17 Op 1 . - CDS 27332 - 27784 455 ## gi|257458766|ref|ZP_05623889.1| hypothetical protein CAMGR0001_2351 29 17 Op 2 . - CDS 27808 - 28008 343 ## gi|257458767|ref|ZP_05623890.1| chemotactic signal-response protein CheL 30 17 Op 3 . - CDS 28025 - 28507 476 ## gi|257458768|ref|ZP_05623891.1| hypothetical protein CAMGR0001_2353 - Prom 28529 - 28588 6.3 - Term 28722 - 28763 -1.0 31 18 Op 1 . - CDS 28810 - 30630 2343 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 32 18 Op 2 . - CDS 30627 - 31115 528 ## CHAB381_0308 hypothetical protein 33 18 Op 3 . - CDS 31082 - 31855 679 ## COG1246 N-acetylglutamate synthase and related acetyltransferases - Prom 31888 - 31947 4.9 34 19 Op 1 3/0.000 - CDS 31968 - 32867 733 ## COG0218 Predicted GTPase 35 19 Op 2 . - CDS 32864 - 33379 737 ## COG1934 Uncharacterized protein conserved in bacteria 36 19 Op 3 . - CDS 33343 - 33876 662 ## CHAB381_0304 hypothetical protein 37 19 Op 4 . - CDS 33932 - 34420 557 ## COG1778 Low specificity phosphatase (HAD superfamily) - Prom 34441 - 34500 7.0 38 20 Tu 1 . - CDS 34506 - 35453 1052 ## COG0226 ABC-type phosphate transport system, periplasmic component 39 21 Tu 1 . - CDS 35601 - 35825 226 ## gi|257458780|ref|ZP_05623903.1| hypothetical protein CAMGR0001_2365 - Prom 35970 - 36029 6.4 40 22 Op 1 . - CDS 36071 - 36649 784 ## COG0131 Imidazoleglycerol-phosphate dehydratase 41 22 Op 2 . - CDS 36698 - 38668 1669 ## COG4232 Thiol:disulfide interchange protein - Prom 38689 - 38748 5.2 + Prom 38697 - 38756 7.4 42 23 Tu 1 . + CDS 38777 - 39679 1018 ## COG2326 Uncharacterized conserved protein + Term 39857 - 39887 -0.4 43 24 Op 1 . - CDS 40426 - 41424 801 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 44 24 Op 2 . - CDS 41441 - 41719 265 ## CCV52592_1288 CRISPR-associated protein Cas2 45 24 Op 3 6/0.000 - CDS 41728 - 42225 407 ## COG1468 RecB family exonuclease 46 24 Op 4 6/0.000 - CDS 42225 - 44345 1281 ## COG1203 Predicted helicases 47 24 Op 5 1/0.222 - CDS 44392 - 45105 516 ## COG1688 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 48 24 Op 6 . - CDS 45106 - 46023 730 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair 49 24 Op 7 . - CDS 46023 - 47816 941 ## CCC13826_1419 hypothetical protein - Prom 47837 - 47896 13.2 50 25 Op 1 . - CDS 47933 - 48664 464 ## CCV52592_1294 hypothetical protein - Term 48678 - 48720 5.3 51 25 Op 2 . - CDS 48737 - 50764 1640 ## COG0751 Glycyl-tRNA synthetase, beta subunit - Prom 50817 - 50876 2.9 52 26 Op 1 . - CDS 50879 - 52213 997 ## CHAB381_1247 putative endonuclease/exonuclease/phosphatase 53 26 Op 2 . - CDS 52228 - 52716 491 ## COG0219 Predicted rRNA methylase (SpoU class) - Prom 52738 - 52797 3.8 - Term 53384 - 53442 3.2 54 27 Op 1 . - CDS 53454 - 54575 764 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 55 27 Op 2 . - CDS 54535 - 55884 942 ## CHAB381_1262 hypothetical protein 56 27 Op 3 . - CDS 55877 - 56095 155 ## gi|257458799|ref|ZP_05623922.1| hypothetical protein CAMGR0001_2384 57 27 Op 4 10/0.000 - CDS 56129 - 57199 1425 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 58 27 Op 5 . - CDS 57209 - 57691 579 ## COG0066 3-isopropylmalate dehydratase small subunit - Prom 57717 - 57776 5.3 59 28 Tu 1 . - CDS 57953 - 58129 58 ## - Prom 58150 - 58209 2.3 + Prom 58002 - 58061 3.7 60 29 Tu 1 . + CDS 58098 - 59978 2653 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 60017 - 60056 2.2 + Prom 60531 - 60590 12.9 61 30 Op 1 . + CDS 60613 - 61734 773 ## CCC13826_0024 recombination protein RecR 62 30 Op 2 . + CDS 61811 - 62320 187 ## CCC13826_0025 hypothetical protein + Prom 62662 - 62721 7.9 63 31 Tu 1 . + CDS 62763 - 62948 66 ## + Term 63112 - 63144 -0.6 - Term 62922 - 62965 5.1 64 32 Tu 1 . - CDS 62995 - 64443 1461 ## FN1289 hypothetical protein - Prom 64497 - 64556 3.5 - Term 64533 - 64589 11.1 65 33 Tu 1 . - CDS 64627 - 65868 816 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 66 34 Tu 1 . - CDS 66478 - 67368 1030 ## COG0240 Glycerol-3-phosphate dehydrogenase - Term 68208 - 68244 2.1 67 35 Tu 1 . - CDS 68360 - 69781 1952 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) - Prom 69804 - 69863 5.9 68 36 Op 1 . - CDS 69895 - 70119 103 ## gi|257458819|ref|ZP_05623942.1| conserved hypothetical protein 69 36 Op 2 . - CDS 70109 - 70789 699 ## COG0356 F0F1-type ATP synthase, subunit a - Prom 70814 - 70873 6.7 70 37 Op 1 . + CDS 71153 - 71314 83 ## 71 37 Op 2 21/0.000 + CDS 71389 - 72219 754 ## COG1420 Transcriptional regulator of heat shock gene 72 37 Op 3 29/0.000 + CDS 72216 - 72791 724 ## COG0576 Molecular chaperone GrpE (heat shock protein) 73 37 Op 4 . + CDS 72836 - 74722 2671 ## COG0443 Molecular chaperone + Term 74832 - 74866 -0.9 - Term 74681 - 74711 1.8 74 38 Tu 1 . - CDS 74741 - 74926 63 ## gi|257458826|ref|ZP_05623949.1| hypothetical protein CAMGR0001_2411 - Prom 75127 - 75186 5.3 - Term 75176 - 75225 7.4 75 39 Tu 1 . - CDS 75248 - 76066 1027 ## COG2998 ABC-type tungstate transport system, permease component - Prom 76086 - 76145 5.0 + Prom 76044 - 76103 8.8 76 40 Op 1 3/0.000 + CDS 76150 - 76842 769 ## COG4662 ABC-type tungstate transport system, periplasmic component 77 40 Op 2 . + CDS 76839 - 78113 1285 ## COG3839 ABC-type sugar transport systems, ATPase components + Term 78114 - 78163 -0.8 - Term 78501 - 78533 -0.6 78 41 Tu 1 . - CDS 78639 - 79964 1651 ## COG0520 Selenocysteine lyase - Prom 79985 - 80044 3.5 79 42 Tu 1 . - CDS 80120 - 81577 1145 ## CHAB381_1159 hypothetical protein - Prom 81597 - 81656 5.8 80 43 Op 1 . - CDS 81971 - 82159 381 ## CCC13826_0213 sodium-dependent tyrosine transporter 81 43 Op 2 1/0.222 - CDS 82177 - 82968 902 ## COG2005 N-terminal domain of molybdenum-binding protein 82 43 Op 3 5/0.000 - CDS 82978 - 83760 1070 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity - Prom 83949 - 84008 3.1 - Term 83947 - 83978 0.0 83 43 Op 4 5/0.000 - CDS 84024 - 85796 2039 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 84 43 Op 5 . - CDS 85845 - 86276 403 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Prom 86541 - 86600 10.5 85 44 Op 1 10/0.000 + CDS 86810 - 89593 2960 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 86 44 Op 2 7/0.000 + CDS 89597 - 90355 751 ## COG1145 Ferredoxin 87 44 Op 3 4/0.000 + CDS 90352 - 91161 627 ## COG0348 Polyferredoxin 88 44 Op 4 . + CDS 91158 - 91691 737 ## COG3043 Nitrate reductase cytochrome c-type subunit 89 44 Op 5 . + CDS 91701 - 92888 1235 ## CFF8240_1156 putative periplasmic protein 90 44 Op 6 . + CDS 92885 - 93220 587 ## CFF8240_1155 NapD - Term 93807 - 93878 5.2 91 45 Tu 1 . - CDS 94055 - 95458 1517 ## COG0628 Predicted permease - Prom 95480 - 95539 6.3 + Prom 95487 - 95546 7.5 92 46 Tu 1 . + CDS 95654 - 96097 318 ## COG0117 Pyrimidine deaminase 93 47 Tu 1 . - CDS 96411 - 97427 1319 ## COG2255 Holliday junction resolvasome, helicase subunit - Term 98083 - 98115 1.4 94 48 Tu 1 . - CDS 98343 - 99020 594 ## gi|257458853|ref|ZP_05623976.1| hypothetical protein CAMGR0001_2437 - Prom 99090 - 99149 3.5 - Term 99225 - 99275 -0.8 95 49 Tu 1 . - CDS 99436 - 100233 1329 ## COG0413 Ketopantoate hydroxymethyltransferase - Prom 100261 - 100320 6.5 + Prom 100759 - 100818 7.7 96 50 Tu 1 . + CDS 100923 - 101267 317 ## CCC13826_1678 putative aminotransferase + Prom 101367 - 101426 3.6 97 51 Op 1 . + CDS 101464 - 101865 454 ## CHAB381_1520 hypothetical protein 98 51 Op 2 . + CDS 101843 - 102007 72 ## 99 51 Op 3 . + CDS 101943 - 102176 213 ## gi|257458858|ref|ZP_05623981.1| hypothetical protein CAMGR0001_2444 + Prom 102603 - 102662 9.4 100 52 Op 1 . + CDS 102719 - 103042 535 ## gi|257458859|ref|ZP_05623982.1| hypothetical protein CAMGR0001_2445 101 52 Op 2 . + CDS 103043 - 103417 188 ## 102 52 Op 3 . + CDS 103417 - 103689 207 ## + Term 103740 - 103782 -1.0 103 53 Op 1 . - CDS 103898 - 104518 465 ## HH1096 hypothetical protein 104 53 Op 2 . - CDS 104518 - 104772 249 ## gi|257458863|ref|ZP_05623986.1| conserved hypothetical protein - Prom 104839 - 104898 11.2 + Prom 104829 - 104888 9.9 105 54 Op 1 . + CDS 104935 - 105462 449 ## JJD26997_0354 hypothetical protein 106 54 Op 2 . + CDS 105541 - 105780 282 ## gi|257458865|ref|ZP_05623988.1| hypothetical protein CAMGR0001_2451 + Term 105783 - 105826 11.0 + Prom 106071 - 106130 7.7 107 55 Op 1 . + CDS 106354 - 107718 938 ## gi|257458868|ref|ZP_05623991.1| hypothetical protein CAMGR0001_2454 108 55 Op 2 . + CDS 107728 - 108156 290 ## gi|257458869|ref|ZP_05623992.1| conserved hypothetical protein 109 55 Op 3 . + CDS 108166 - 109272 709 ## CCC13826_0191 hypothetical protein 110 55 Op 4 . + CDS 109232 - 110401 1128 ## COG1450 Type II secretory pathway, component PulD + Term 110470 - 110510 1.4 + Prom 110466 - 110525 2.2 111 56 Op 1 . + CDS 110545 - 111420 428 ## CCC13826_1212 nucleoside diphosphate kinase (NDK; NDP kinase; nucleoside-2-P kinase) (EC:2.7.4.6) 112 56 Op 2 . + CDS 111445 - 111897 468 ## gi|257458873|ref|ZP_05623996.1| bacteriophage replication gene A protein 113 56 Op 3 . + CDS 111909 - 112784 448 ## CCC13826_1213 ferredoxin, 4Fe-4S - TRNA 112827 - 112901 86.4 # Met CAT 0 0 - TRNA 112942 - 113016 74.6 # Gln TTG 0 0 - Term 113233 - 113264 4.1 114 57 Tu 1 . - CDS 113292 - 113738 486 ## COG2165 Type II secretory pathway, pseudopilin PulG - Prom 113800 - 113859 8.8 - Term 113749 - 113784 1.9 115 58 Op 1 5/0.000 - CDS 114012 - 115262 1260 ## COG0388 Predicted amidohydrolase 116 58 Op 2 . - CDS 115283 - 116275 1033 ## COG2957 Peptidylarginine deiminase and related enzymes - Prom 116296 - 116355 5.2 - TRNA 116329 - 116405 81.5 # Arg GCG 0 0 + Prom 116710 - 116769 8.3 117 59 Op 1 . + CDS 116795 - 117418 342 ## gi|257458879|ref|ZP_05624002.1| hypothetical protein CAMGR0001_2469 + Prom 117490 - 117549 5.2 118 59 Op 2 . + CDS 117578 - 117820 208 ## gi|257458880|ref|ZP_05624003.1| hypothetical protein CAMGR0001_2470 Predicted protein(s) >gi|257443718|gb|ACYG01000005.1| GENE 1 119 - 631 437 170 aa, chain - ## HITS:1 COG:CAC2475 KEGG:ns NR:ns ## COG: CAC2475 COG3467 # Protein_GI_number: 15895740 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Clostridium acetobutylicum # 1 168 5 153 154 66 29.0 3e-11 MRRRDRQLSEDEALKIIDESEYATLSCIDESGEIFSVPISPVRDADIIYIHGAPAGTKAK LFQNGRAVTAVFVSYNRVPTPSDEEYRSIANDAAALGSRVYTTEYRSAIAVCEANEVLDD ERKIYALRILCEKYTPNYMSRVEFASRASLKRTKIYELKIKSITAKAKIL >gi|257443718|gb|ACYG01000005.1| GENE 2 632 - 1777 1527 381 aa, chain - ## HITS:1 COG:Cj0696 KEGG:ns NR:ns ## COG: Cj0696 COG0206 # Protein_GI_number: 15792045 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Campylobacter jejuni # 1 381 6 370 370 325 53.0 1e-88 MEERKGIYGAKMKVIGVGGGGCNMINHMIREGFTKTDVELMVANTDAQALEKSIANTRIL LGENTTKGLGCGMDPALAKMAAEENYDDLKDRLDYSDIVFVGSGLGGGTGTGAAPIVAKA AKEKKALTIGVVTTPFGFEGKKRMRLAQEGLEELKKECDSIIVIPNQNLLKIIDKKTGLK DAFKIVDNVLFQAVNGMISVILESGDSDINVDYADVKKVMTHRGLALMGIGVSEGDGAAE EALKSAIQSPLLDNTSIHGAMGVLVHFKMSPDCSLLEIESAMNIIEDTVDKDADVTWGTT TDPKMENNRVEVTLIATGFERSIEEKKQVASDNVADRRKALLESMGRNSIFSRQKVSSGD FNGDETYDELDEPAFLRNQMD >gi|257443718|gb|ACYG01000005.1| GENE 3 1815 - 3182 1364 455 aa, chain - ## HITS:1 COG:Cj0695 KEGG:ns NR:ns ## COG: Cj0695 COG0849 # Protein_GI_number: 15792044 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Campylobacter jejuni # 5 455 5 462 462 419 50.0 1e-117 MSEYILGLDIGSTKIRAIIAKNDGIFTVLGVGGADTLGIKKGVITNIEQAAGSIKQAVKA AVKGAGRSYDKAIISISGSYAKSVKSRGVITMENEIGLDEIKRAMQVAEAQANVPSDSVI LHVLPYDFRVDEQEHIEDPLGMSGTRLEVSTHIVIAPESSIKNLKKSVEMAGVKVDNIVL SGYASSISTLSKDEKELGVVLIDMGGATCDIVIHLGNSLRYNDVVMFGSNNVTNDLSRAL HTPLPYAENIKITYNDLINQGNSEVELPALGDSESENHIISLEIISQVILARVKETFDMI ADKIERSGYKDRIGAGIVITGGMAKLDDVRDLAAIVFDNTSVRVARAKSVGGLHEIADDI SNSCALGLCMYGFGEFTPYEMDSNGKLRYKDEVINKAPKRNVNEYYEKEVSKAIEKEGVR ADSGVAKKEDLNIQLPKKDGQNFFNKIWSSMKNWF >gi|257443718|gb|ACYG01000005.1| GENE 4 3175 - 4632 1427 485 aa, chain - ## HITS:1 COG:Cj0694 KEGG:ns NR:ns ## COG: Cj0694 COG0760 # Protein_GI_number: 15792043 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Campylobacter jejuni # 1 481 1 495 496 282 35.0 9e-76 MIEWMQKHKKSLIPTIWISTIAFVGAGFVGWGAYDMNANRAGSIARVGQISITNQELNTK YSELYNRLSAMSDGQFTQEQAKNMHLDQIAVDQLIGEAYFLNFAKDLGIQASDKDVAEFV VSSPNFQENGAFSKELYDNVVRNSGLTKKEFERNLQKVLTLEKLGKALKITPSPKIVEAF AASQLMQDKVSAEIIYADANVTFSDDELKKFWEGEKSHFMTEKKYTLGAYFVAPSKADVN ETELSKFYKEHRGEYRSLDDKLLDFAEAKPDVLKDYRMDQVKKDATKDYLEIKKGKLDTN ETIVATASNFPISEIEVAKPGDVIKPFEYKGGYLIAKLNGVEQPRQMSFEEAKSLASKEF ETKKRKELLEKRAQDALKNFKGEDFGMLSLNSKNNTKLSDDEFYKFLIDMFNKPAKEGIV MFDNKAVVYKISQQSLGNSEEIDKEKAIVADRITALLNSNLQDDLTKMLEKRYKTERYFK GKDSE >gi|257443718|gb|ACYG01000005.1| GENE 5 4765 - 5325 620 186 aa, chain - ## HITS:1 COG:jhp0104 KEGG:ns NR:ns ## COG: jhp0104 COG0235 # Protein_GI_number: 15611174 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Helicobacter pylori J99 # 9 185 19 196 212 162 44.0 3e-40 MDEYYYEILRKISLSMFRDRLFGIFHGSISAKIKENQFLINKKDAIFDSLDRDDFITLFS KKDYRWQDASIDSDIHINIYKNIKEAKFVTYATPPYLVAYTLEHDFILPRDYFGASKFKR IEIYDPKSYDDWHERAPYEICNYMINENSDIMVIRGYGVFAHARSAQQMAKKIAILEMSS KLLLLS >gi|257443718|gb|ACYG01000005.1| GENE 6 5390 - 6325 563 311 aa, chain + ## HITS:1 COG:Cj0693c KEGG:ns NR:ns ## COG: Cj0693c COG0275 # Protein_GI_number: 15792042 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Campylobacter jejuni # 1 308 3 304 312 306 50.0 3e-83 MQAPHIPVLFSQTIAAFSQLEDGYVIDCTLGYGGHSEGILTANPHLKLIACDRDAEAIEF SRERLSKFKDRIEIHKAKFSEILKILPEQKLRAVRGILADIGVSSLQLDKNCRGFSTKSD ALDMRMDESAALDAAYVVNRYSQADLARIFREYGELTNANAIAAKIATARTNAPLTSAKA LANLIGTKPVKGRSISTATLAFQAIRIEVNDELGELKRLLTLIEQKSRDSILTNATVAII SFHSLEDRIVKEQFKAWERDCVCPSEFMRCECGGDHSLGKILTKSPLTADAQELAQNSRA ASAKLRIFRLK >gi|257443718|gb|ACYG01000005.1| GENE 7 7068 - 7877 824 269 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0817 NR:ns ## KEGG: CHAB381_0817 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 174 261 3 90 124 113 60.0 7e-24 MNKYEYFADDDDGHDFAGTSDLAGIELAKRRAMEDLTDEELEDKLAADLSVKRNYASSAG GYDDFTGLEFESSGFTSASNYLNSESGGTKFNKSSKVKFKGRGDANISATRGSDNSSGAS YGDFADANFVGKADYAAFADANFASTQNQNYADLGAHDYASLAAGRGYGSFAGAQDELLR NYDAEKKKEKNLTLYQLLVVYLLIGFAFLLTVPAIYIRNEIYYISRDIAALRTKHEVLLE ENRALNNDIEYLRYKNEILDPQSVQENGR >gi|257443718|gb|ACYG01000005.1| GENE 8 7867 - 8937 284 356 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 [Phaeobacter gallaeciensis BS107] # 58 340 86 378 409 114 27 3e-24 MGADGILLAAFAFFAALVLALLIALVLQNRRISDANSALSELLSERLTAQSARASAELFK LNQSLNDGFNDKLYYLNRSLGEGLQRQNSALSENLSSLDRGFKDIAENLARMSEQNKTSL QVRDEIARLNSILGNVKLRGNFGEYRLERILSMIYGQNAAFYELQKHLPNGRIADCALHI AKEKILCIDSKFPLQSYEKIIATSASNDAAALASADKQLAADMKKHAADIAEKYIIPPLS TEFAVLFVPSEAVFVYVCERLPQVLEYCAQIGIFAASPTTLLALLGTIRTFIKDEVLAQN IKSVKDEIYALKSDFDAHAKYATALQTYADKLAAQAELLNKNAKSLKARFERFSEL >gi|257443718|gb|ACYG01000005.1| GENE 9 10019 - 10291 255 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458743|ref|ZP_05623866.1| ## NR: gi|257458743|ref|ZP_05623866.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 90 1 90 90 160 100.0 4e-38 MKSLILCSALCAVVLGLGGCAGSDKSIILQGDAHDRACAEVYERYKELEAELLAVEDRYA NPSVANDYIQAYDEYERTIAYYNKNCATDK >gi|257443718|gb|ACYG01000005.1| GENE 10 10985 - 11350 356 121 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1531 NR:ns ## KEGG: CHAB381_1531 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 120 1 120 121 134 55.0 1e-30 MENQKSERCLSLDNFTDIANIEAEIIKLISDDLGDYALYEQFENSEITKREVSTAGYYCH FECKKILEKSKNNGFVGNVNLTLSDENIGGAMVLLENGILKMLECYFWEENNFFENIVNG Q >gi|257443718|gb|ACYG01000005.1| GENE 11 11679 - 12791 1213 370 aa, chain - ## HITS:1 COG:Cj1457c KEGG:ns NR:ns ## COG: Cj1457c COG0585 # Protein_GI_number: 15792774 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 2 363 11 372 372 429 61.0 1e-120 MKNLYTLNHAPINAHFSKNSSDFVVREVPLYEPSNEGEHCILLLQKKGIGTHEALRILSE RTGAKMREFGYAGLKDKQGLTTQHVSMPAKFEPALGGFSHESLKILSVQRHKNKLKIGHL KGNDFFIRLKKVLPPDAVKLAAALDTLGREGFANYFGYQRFGKFGDNAAQGEEVLRGQRR LKNPKMRDFLISAYQSELFNRWLSKRVEISKFAAEFSLGEFAKIYGLSKEEAREIAAQPQ FFKLLRGEILGHFPHGAFFSCDDLGAECERFARREITSAGLIVGRAKLRASGLGGRFEDE IFTPSREFEAQMNGSRRFAWSFMERVQHAYDAQNAHFSFSFYLPKGSYATVVLEEILHRD IFEGAATDED >gi|257443718|gb|ACYG01000005.1| GENE 12 12898 - 13935 1125 345 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1008 NR:ns ## KEGG: CHAB381_1008 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 345 1 338 338 230 41.0 6e-59 MLQIRLFRFDPRCDVASYFKPYVYESAPFADLAALLDDICAHDPYFSAQGVEFVKIGGTT VSVKEPLDTLIAHFGSELIIAPLSEKEAIKDLRCEPRAFLDKFKAFENIADVSDFEFYKS LAPYFYSTKIPACSREFLGNSAFIFAHRLMQTHPSERMRILEIIEPQIAYFTKCDAVGME FDDRAAYRAFCDILKFKPARSNKILSAQSMAEFDAAGAKHDFSGFNVAVWYDEAAEGLAI RLGAQIVHFECEGAPLGAQIYERERECALRLGGEILFDAFDSGSDFLLVNSKLALDFLDG RSDEIQRLFGRDLAGFYLIATDELIALARGERPDFSARKLKPTLI >gi|257443718|gb|ACYG01000005.1| GENE 13 14032 - 14286 167 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458747|ref|ZP_05623870.1| ## NR: gi|257458747|ref|ZP_05623870.1| hypothetical protein CAMGR0001_2332 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2332 [Campylobacter gracilis RM3268] # 1 84 1 84 84 143 100.0 5e-33 MFFAPIWAFIATPSFDFWKDSKVDEFFKFAAMKRDMKLLNDERYQKPLDRKIIWLYIAFE FCLGLSVYLGIFGLIVSTILRIIF >gi|257443718|gb|ACYG01000005.1| GENE 14 14388 - 14870 308 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458748|ref|ZP_05623871.1| ## NR: gi|257458748|ref|ZP_05623871.1| hypothetical protein CAMGR0001_2333 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2333 [Campylobacter gracilis RM3268] # 1 160 1 160 160 314 100.0 2e-84 MAFVAEYISKEDIKKYDIINRVDQRLAKYHYDPQGPNEIKWLDWVIDRQRDIWLIFVCSP HLPDPRDGYTGEEIWLLYYKGREIELDIRRVYDETTSKMLADNPFFIKYKLENINSSIDG ISLDELYGVLNEALKEYGNRGIDGRENLPKEHEVVTFLHD >gi|257443718|gb|ACYG01000005.1| GENE 15 14886 - 15362 352 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458749|ref|ZP_05623872.1| ## NR: gi|257458749|ref|ZP_05623872.1| hypothetical protein CAMGR0001_2334 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2334 [Campylobacter gracilis RM3268] # 1 158 1 158 158 295 100.0 6e-79 MAFVTERISKEDVEKYDLLKPCNEICNKYYQGELDLVDLNSRDWCIDRDRGIWLFVVRSI TIGDPRDMNYSGEDIWILHYKGKDIEIDLRNIHNEYTGKKDTDNPFILIYELESIRSDIG DIPKQEIVDILKEILNEYGDGGSIISKENIQVTFVSKI >gi|257443718|gb|ACYG01000005.1| GENE 16 15378 - 15854 510 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458750|ref|ZP_05623873.1| ## NR: gi|257458750|ref|ZP_05623873.1| hypothetical protein CAMGR0001_2335 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2335 [Campylobacter gracilis RM3268] # 1 158 1 158 158 303 100.0 3e-81 MAFVTERISKEDIEKYDLLKPSNEICEKYYQGELDWANLNSRDWCIDRERGIWLFPVRVI TIGDPRDMEFSGEYIWLLHYRGKDIEIDLRDINNENTGKKVTDNPFRIIYELESIRSDIG DIPKHEIVDILKEILNEYGDGGSIIPKENIQVTFVSKV >gi|257443718|gb|ACYG01000005.1| GENE 17 16296 - 16982 736 228 aa, chain - ## HITS:1 COG:Cj0516 KEGG:ns NR:ns ## COG: Cj0516 COG0204 # Protein_GI_number: 15791878 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Campylobacter jejuni # 1 222 1 224 230 228 44.0 5e-60 MSLARIRALFYAIWFIFTVVCVVIAMAVKNSSHRRFRRIWGRFQRYGIGYDIQIIGTPDP RAQLVIANHQSIMDIVVLEETHPADICWIAKKEIADIPIIGKIITLPKMIQVDRSNPRDL VRIVHEVQQRVSERRVITMFPEGTRHRGTQLLQFQSGAKAIVSKLGLRVQPVVLIGTQHI ANSHDFTVHSGHVKIIYLDLLDTSDKDWLQHAREAMQAVIDENETAEA >gi|257443718|gb|ACYG01000005.1| GENE 18 16963 - 18255 1484 430 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0844 NR:ns ## KEGG: CHAB381_0844 # Name: not_defined # Def: putative periplasmic protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 430 3 424 424 382 48.0 1e-104 MLKRILTILGVCTLAFAAPEIEIDSLDDLSKYAPKKAEDKPDEPQTRDNSKVMLKYNKKE VMSMDNLSIDDLKALAPTNEVDLDVSDDKVYQDIKPKELTLKASGMPRKVYCNQIFKIDF AVYLGQKITVKPKLEISRTNGMKWLNADNLTWIEGDEMFETTLWFAASDKSDKINELVLT LQRNGEFFEKSSIKPDNPEFIKLDTKPNFSHIVADELKLKNYKTTKFDDASNLLTLDLGI RNGAISAFSIDNPAIIKQGVDSVRGTYASQSGYYFAVVDKNITNLDFSYFNLNTKKFENF GLELNPRAEDLSTQIGLNPKESKFEAYKQIAIYTLAAVLLVMFLLSKNITPLIFAVLILA VNFYAQRPYGTGSIAQNSPVRILPMQSSTVFYVTKNPEKVEILGTNKEFYKIMLGGNKIG WVKKDELSKD >gi|257443718|gb|ACYG01000005.1| GENE 19 18249 - 18914 664 221 aa, chain - ## HITS:1 COG:Cj0514 KEGG:ns NR:ns ## COG: Cj0514 COG0047 # Protein_GI_number: 15791876 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain # Organism: Campylobacter jejuni # 1 220 1 214 223 300 67.0 2e-81 MKVAIVNFPGTNCERDTKYAFDKLGCETQIIWHKEDKINADLIVLPGGFSHGDYLRTAAI AKFSPVMKAVLAHAARGGYILGICNGFQMLLELGLLAGAMNKNINLSFISKFHNLRVVSN DNKFLHCCDKGEILNIPIAHGEGNYYAPADTLKSLYDEDCVLLKYCDANGADLNPNGSVD AIAGICDKNKKIFGLMPHPERAIEPILGGTDGEKMLKGLIC >gi|257443718|gb|ACYG01000005.1| GENE 20 18911 - 19147 389 78 aa, chain - ## HITS:1 COG:BMEI1123 KEGG:ns NR:ns ## COG: BMEI1123 COG1828 # Protein_GI_number: 17987406 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component # Organism: Brucella melitensis # 1 78 2 79 80 82 58.0 2e-16 MKVIVNVRLKQGVLDPQGKAVLHALASLGFSGVRDVRVAKQIVLELDGEDRDKIYADVAR MCDEILANTVIEDYEIVI >gi|257443718|gb|ACYG01000005.1| GENE 21 19151 - 19870 889 239 aa, chain - ## HITS:1 COG:Cj0512 KEGG:ns NR:ns ## COG: Cj0512 COG0152 # Protein_GI_number: 15791874 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Campylobacter jejuni # 4 238 2 235 236 312 69.0 4e-85 MQATKKELIYEGKGKKMWSINESDDLLISEFKDSLTAFNGVKKAEESGKGALNCKISTLI FDLLKKHGIATALVETISPTEQLVKKCKIFPLEIIARNIATGSLTKRLGIKEGTKLPFTL VEFCYKDDELGDPILNDEHCLLLGAVKSQSELDELKKIARKINGILIKFFDERNLKLVDF KIELGRDKDGNILLADEISPDSCRFWDKQTDKKLDKDVFRQDLGSVKVAYEEVLRRILG >gi|257443718|gb|ACYG01000005.1| GENE 22 19881 - 21197 1429 438 aa, chain - ## HITS:1 COG:Cj0511 KEGG:ns NR:ns ## COG: Cj0511 COG0793 # Protein_GI_number: 15791873 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Campylobacter jejuni # 1 438 6 441 444 520 65.0 1e-147 MRQKHLFFGLGFIFSLFLGVSFFTGNLQAREVNATKKPDSEKTRLEALAKLTKTLAIVEN NYVDEMTFSELVDKTISGLMNNLDAHSSYMDEKAFNDTKVQTEGEFGGLGIQVGMKDGAL TVISPIEGTPADKKGIQANDVILRIDGNATFGITIDDAVSKMRGKPKTKITLTIVRKGVS KPFDVEIIRDIIKVESVYAKMIEDDKILYLRVTNFDQHVVPDASKFIKEHKDAKGIILDL RNNPGGLLDQAIGLVNLFVSKGLIVSQKGRAKNETEAHNADPKKKITDLPLVVLVNGGSA SASEIVSGSLQDLKRAVLVGEKTFGKGSVQVILPIEDKEALRLTIARYYLSSGRTIQAVG VTPDLIVAPGKVPSRDEDEFSLKEADLKKHLQGELAKVETKKKDAQKKDDKNFITAEQIN NDIQLKTAIDAIKILNIK >gi|257443718|gb|ACYG01000005.1| GENE 23 21386 - 23995 1495 869 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 9 867 7 811 815 580 39 1e-164 MNETIEILTDKMRSLLESSVSLAIHSKNSEVGVLHMLWALVADSGSVLNQIFNKFSIEKT AVELEIKSEISNLPTSSNVTKENVRISRELMNSLELAKGLMTSSGDKFIAVDTWLIANLN VDPLKKILSKFADLSEIKKELEALRGGKSIDSQTADETLEALSKFGVDLTAKAIAGELDP VIGRDEVISRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQLIAKKEVPLSLQNKRVIA LDMSALIAGAKYRGEFEDRLKAVINEVVKAANVVLFIDEIHTIVGAGASEGSMDAANILK PALARGELHAIGATTLKEYRKYFEKDAALQRRFQPVTVAEPSVSEATAILRGIKERLEVH HNVTITDSALVAAARLSDRYISDRFLPDKAIDLIDEAAAELKMQIESEPNELAKAKRDIL TLQVEKEALKMEDDGKNDERLAQIDKEIENLTEQKNALQAKFENEKSVFGGISEAKKAID SLKNEASLARRNGDLSKAAEIEYGKIPAAQAKVKELEAKWDAMKENGVLLRNRVDEESVA EILSKWTGISVSKMLSSEKEKFLHIEEHLKESVVGQDEALHAIARAVKRNKAGLVNENRP IGSFLFLGPTGVGKTESAKSLARFLFDDERAMIRFDMSEYMEKHSVSRLLGAPPGYVGYD EGGQLTEAVRRKPYSVLLFDEIEKAHKDVFNILLGILDDGRATDNKGVTVDFKNTIIILT SNIGSAKIMELDAKNVDKPREVALAEREEAVKSELKNYFKPEFINRLDDIVIFNALNEDD LIKIVGIMFKSLQKTLANRGINASLSENAKKLIASAGFDIEYGARPLRRALYDLVEDKIA DMILSDDIKTGDRIEIGARDGEIEIKRAK >gi|257443718|gb|ACYG01000005.1| GENE 24 24063 - 24296 228 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEFYQKWDTKELLLDEFQFPTGWDSTWGTGGEIPFEESFNSQRDGILLGFIRLSIVIIRL FQFPTDRLPAQFILIKY >gi|257443718|gb|ACYG01000005.1| GENE 25 25159 - 25404 273 81 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1101 NR:ns ## KEGG: CHAB381_1101 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 81 1 81 81 127 77.0 1e-28 MLETSDIFNILHNAVEAKNNGKKISHAAMAQRLGVSMRTYQDWRLGTTKPQAATAICQML CELDSDDAAFVLHKIKKLIGE >gi|257443718|gb|ACYG01000005.1| GENE 26 25766 - 26095 59 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEFYPSKGHRRADSKRFQFPTGWNSTLPFSPRSGSGRSVSIPNGMKLYGIFISLACHLCC FNSQRDEILPVFTSDTNARIGFNSQRELKCETHISRIHRLSVEFYSTRN >gi|257443718|gb|ACYG01000005.1| GENE 27 26624 - 27076 128 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458765|ref|ZP_05623888.1| ## NR: gi|257458765|ref|ZP_05623888.1| hypothetical protein CAMGR0001_2350 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2350 [Campylobacter gracilis RM3268] # 1 150 1 150 150 249 100.0 5e-65 MGIIFASIDAVFLTEYRGYDIAHPFSIVLKAFELTWHEEAGDSESDIFGAMILYLFCATV ILPLIICCFVFSKIKAFILLDKISAASAFFISLFYTYSLAVIILTRADLTWLGHLFDRPN FNSNLMLISALSSLIIASVAVFILKRRDKI >gi|257443718|gb|ACYG01000005.1| GENE 28 27332 - 27784 455 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458766|ref|ZP_05623889.1| ## NR: gi|257458766|ref|ZP_05623889.1| hypothetical protein CAMGR0001_2351 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2351 [Campylobacter gracilis RM3268] # 1 150 1 150 150 275 100.0 9e-73 MAFENAIITKEDDEKYGLSEIYYKYNPLYKILPSQKSWIIDKKLDCWIMKTQLFNDPEID HAYLSKVMWKFYYKGDIFDIVLDYGLDEKVSGIQYNKVWKVLSIVPNGSEKISVDEILSL LKEQLIVFGLDGLYKQGENYKVTLIDARKG >gi|257443718|gb|ACYG01000005.1| GENE 29 27808 - 28008 343 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458767|ref|ZP_05623890.1| ## NR: gi|257458767|ref|ZP_05623890.1| chemotactic signal-response protein CheL [Campylobacter gracilis RM3268] chemotactic signal-response protein CheL [Campylobacter gracilis RM3268] # 1 66 1 66 66 113 100.0 4e-24 MTSKQADQILADIADGKDVRTSSGAKVTAENFEKFFLNDMVRKLGTKSEGDIYEHISEYK YVVDIN >gi|257443718|gb|ACYG01000005.1| GENE 30 28025 - 28507 476 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458768|ref|ZP_05623891.1| ## NR: gi|257458768|ref|ZP_05623891.1| hypothetical protein CAMGR0001_2353 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2353 [Campylobacter gracilis RM3268] # 1 160 1 160 160 307 100.0 2e-82 MAFVAEYISKEDIKKYDIINRVDQCLAKYHYDPQEPNEIKWLNWVIDRQRDIWLIFVCSP HLPDPRDGYTGEEIWLLYYKGREIELDIRRIYDETTSKYFTENPFKIKYKFQSVNSDIGD ISIDELYEILNEALSEYGSGGIENREYVPKEHEVVTFLHD >gi|257443718|gb|ACYG01000005.1| GENE 31 28810 - 30630 2343 606 aa, chain - ## HITS:1 COG:Cj0652 KEGG:ns NR:ns ## COG: Cj0652 COG0768 # Protein_GI_number: 15792012 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Campylobacter jejuni # 1 590 1 599 601 659 54.0 0 MRLKFVFAFVILFFSMLLVRIYYLSIKSNEFYEQVAKNNVISTEYIPPVRGQILDAKGRP LAINNLGFSLSIAPHLKDAALQSELNNISRYFKDLNVTAMSKSYKDANSAYNQDFIEVVP FLDYNVTIQHFASLSLHENIKISPASQRFYPYGALASHIIGYVGRANKKDIQSNPLSALT GYNGRSGVEGYYNELLQGSKGERKTKVTALNQVVEEISMQEPSSSEISLTIDLELQKYLE EIFKDKDGVAIVMDLRDGAIIAAGSFPEYDLNTFVGGISQAQWDELIKDPRHPFTNKLVN GLYPPGSVIKMAVGMSFLNSGKINENWSVFCSGAIELGGRKFRCWKSWGHGRVSLVEAIK GSCDVYFYEGSLLVGIDYMSAYLQRLGFGSKTGVDLPNEFVGTMPNKAWKMQKFKRAWYQ GETVNASIGQGDVLVTPMQVAKNTAQIAAGKAITPHFLKSIDGKPVEFTPTELFTPKEKA QLPLVRRGMYEVGNNPDGGTAYKLIHTAVVPLAVKTGTAQVVGISQTAKKRIKEADMDYF HRSHAWMTSFGPYDKPQYAVTVLVEHGGGGGSAAGPVIMQIYEKLVQMGYIDANATTNKD SAKKTK >gi|257443718|gb|ACYG01000005.1| GENE 32 30627 - 31115 528 162 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0308 NR:ns ## KEGG: CHAB381_0308 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 162 1 162 162 99 45.0 6e-20 MQRNRTYLYLIADTLFSAGVLFYLLLSAVYRGLPPLIGFFFTAMVVQKYENDVKFKKFGF SWFFSIFYLFCAEQIHGFNLFSVAIAYCIFYFVVYENSFKYIKFRNFLICFYVMISYVLV FVVSNAISAIKKSEYLPLSGEYLNYIVIEILLALLFFKGRLV >gi|257443718|gb|ACYG01000005.1| GENE 33 31082 - 31855 679 257 aa, chain - ## HITS:1 COG:aq_1359 KEGG:ns NR:ns ## COG: aq_1359 COG1246 # Protein_GI_number: 15606556 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase and related acetyltransferases # Organism: Aquifex aeolicus # 152 257 59 162 181 96 46.0 6e-20 MIRLKKARLCDISRMQELVKEEVQNGVILPLESDEIAANIRSYVLAFGCDSKADRSFDSK ENSDLNLARNADLNLIQSSAANFAKNSTENSAENAASNFAPQLATPQSEAQAVSEAGCAQ AGKEQILRSEYSQSASVFQNDLSQLCESQSAKDAEILAGFASLKIFNADLAEVRSLIVAP QFRRRGIARAIVNELLDEAKFYGLKSVFTLTYQKEFFERLGFIEIPKDELPAQKIWADCI KCKKFPVCNEIALIYTL >gi|257443718|gb|ACYG01000005.1| GENE 34 31968 - 32867 733 299 aa, chain - ## HITS:1 COG:Cj0650 KEGG:ns NR:ns ## COG: Cj0650 COG0218 # Protein_GI_number: 15792010 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Campylobacter jejuni # 176 299 73 196 198 134 56.0 2e-31 MIYPSSAQFITSAANIAGAPEFAMSEVAFLGRSNVGKSSLINALTGRKNLAKSSSTPGKT QLINFFEVKFKQKLAADSDDSQAKMPPDLASKGALNSDANYARDFADAAASERNLKQDSI LNLKSASADFESDRHADLAAGLASNSAQSSELNFTGRSALNLADNPAFSDLASLGENISL IFVDLPGFGYAKVSKKLHYIWQKNLDEFIKERLNIKLFVHLIDARQFDLEIDKNLQNYLS SFLRGDQKVVRLYTKADKLNQSERAKLLRHDPQAILVSTLKGSGLAKAREIIVRRAFGL >gi|257443718|gb|ACYG01000005.1| GENE 35 32864 - 33379 737 171 aa, chain - ## HITS:1 COG:Cj0649 KEGG:ns NR:ns ## COG: Cj0649 COG1934 # Protein_GI_number: 15792009 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 33 169 20 153 153 104 41.0 6e-23 MVFNKRSKLHKLILAAALITGFSASALSAAQEQVEVTADNFFADEIKQISVLTGNVRIKK GAYDTLNSDKVTIYFDAKRQPTKYVATGNANFKILLNQKHYDGRGGVLTYDPTIEAYTLE NNAYLHEAETKKEVYGDKIIVNRQKGTYEVKSGGGEKKPVRLIFQVEDQNK >gi|257443718|gb|ACYG01000005.1| GENE 36 33343 - 33876 662 177 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0304 NR:ns ## KEGG: CHAB381_0304 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 168 1 167 170 155 47.0 7e-37 MVIKIFYVAIAIFCVAMVFLSVQTPYFSDMFRQDLSIANMEMKKIVDYQIGELVDAKFTA DGGTRYKDRDEFVNFKAEETTSDLNHTLVSKTATRAGELIKFNGDAHYINTDGFDYTAQE IIYDTSSKIVRSDVPYVLRQGGDRITGTSISYDTKTKQTNSKGIHAWYLIKDQNSTN >gi|257443718|gb|ACYG01000005.1| GENE 37 33932 - 34420 557 162 aa, chain - ## HITS:1 COG:Cj0647 KEGG:ns NR:ns ## COG: Cj0647 COG1778 # Protein_GI_number: 15792007 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Campylobacter jejuni # 1 162 1 162 162 171 53.0 6e-43 MIKIIFLDVDGCLSDGGLYHSNGGEEMKKFNVKDGFGIQEWQRLGLKVAIITGKSSQIVA NRARELKIDTLFQGEKDKLSRAEQILKNFNLSFDEAAAIGDDINDAKLLNAVAISFKPAD ALNSLKADVVLSKNGGCGAVREMIEMLVDKNGMREEWNSKWM >gi|257443718|gb|ACYG01000005.1| GENE 38 34506 - 35453 1052 315 aa, chain - ## HITS:1 COG:STM3528 KEGG:ns NR:ns ## COG: STM3528 COG0226 # Protein_GI_number: 16766815 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 3 313 196 514 519 181 35.0 2e-45 MKRAIIAILLVFILAAFDFAFYRLVVKRYVNQSSAEMQAKSIELHKFLPFDEGSQIVRAS SSLKLSGDLPIIDGAAALYPVFSAFVAASYPKDSVEFDGQNFTSASRLKFSNTRDAYKAI SDGEADLIFVAAPSKQQLAYAQEKGARLRFVPIGLEAFVFIVNANNKVSNLSVDQVRGIY SGQYSDWSQLGGERMRIDAVQRNVGSGSQSAFLKFMGETQPKRKITGFFGSAIGFSFRYY VEGIVQNGGVKMLSLNGAYPNKENIASRKYPLVAEIYAVYDENNKNENIRILIDWILSPQ GQSIIENSGYVPIKG >gi|257443718|gb|ACYG01000005.1| GENE 39 35601 - 35825 226 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458780|ref|ZP_05623903.1| ## NR: gi|257458780|ref|ZP_05623903.1| hypothetical protein CAMGR0001_2365 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2365 [Campylobacter gracilis RM3268] # 1 74 1 74 74 116 100.0 5e-25 MDSFSIFIFLLFALPIISFIWFVVRLVKFIRSKNEPARRGKDKIFLIFSVLTLACSTGAV VGFLWLLDRALAHM >gi|257443718|gb|ACYG01000005.1| GENE 40 36071 - 36649 784 192 aa, chain - ## HITS:1 COG:lin0575 KEGG:ns NR:ns ## COG: lin0575 COG0131 # Protein_GI_number: 16799650 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Listeria innocua # 3 192 5 194 194 188 52.0 4e-48 MISKNRATKETKIELELELYGCGSAQIQTGIGFFDHMLSAFAKHAWIDLNLRCEGDLQVD FHHSVEDCGIVLGSAIKEAIYPAQNIERFGDSVVVMDEAAVSAALDFSNRAFLVFDCPSL KHGKIGEFDAELVEEFFRALAFNANFTLHISQIRGENLHHVAEAAFKAFAVAFRRAISIN ERAGVPSTKGVL >gi|257443718|gb|ACYG01000005.1| GENE 41 36698 - 38668 1669 656 aa, chain - ## HITS:1 COG:Cj0603c KEGG:ns NR:ns ## COG: Cj0603c COG4232 # Protein_GI_number: 15791963 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Campylobacter jejuni # 194 649 125 561 567 308 39.0 3e-83 MIRSLILAAFFLLGLGAEPLKPSDAFKLNATAQSDGVTLSFDIADGVYLYQNEIKIFIGG SEVTNLINLPAATEYKDYKIYEGKFSIAVPLGLVLANAADSDDFVLNGDFLGCTKSGFCY QPQQFGFSFKRVVEGYQISKISNSELKRYRSAANSTQISAADSAQSGAVNFKSNSQASGA EANSLANSHAAGNFPASSAENAAVNSDESSAHKNPSGANSISEQDKILNVLSGKSFIAAI ALFFGYGVLLSLSPCVYPLIPILSSIIVAKTSSKPSAKTSLAVSLAYIFGMASSYAILGA FVAVFGQNLQGLLQTPPALILTSLIFAALALSMFGFYEIRLPARFQNFLNSKSEKSGGLI GVFSMGLISALVVSPCISAPLAGALVYIAGSGDVLLGAAALFALGLGSGALLLVVGLGGA LPRPGAWMEAVPKIFGFLLLFTAVWISRTLIGENLSLLIYAVLGAIFAGFLGLFDGGAGG IKRALALVIALYSALLLTGFASGAKDFSRPLGNLIPQNARYSRGGLGESLQAGEISSAQN FGGAHFSFVRDLAQLQGEIENSKKPVIVDFWASWCKNCEQSERAFADPALAGALDKFSLL KIDLSEDSEQNRAIKAHFNVFGPPTILFFKEGAEITSLRQIGSVNSEKLAEILSEI >gi|257443718|gb|ACYG01000005.1| GENE 42 38777 - 39679 1018 300 aa, chain + ## HITS:1 COG:Cj0604 KEGG:ns NR:ns ## COG: Cj0604 COG2326 # Protein_GI_number: 15791964 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 3 281 2 286 293 343 64.0 3e-94 MSKEIKTETGEIALKEIEFKSSKYEKISFKDYETLLERYQIELLKLQKFVKEKGLKILIL MEGRDAAGKGGTIKRLTEHLNPRGCRIVALEKPSNVEKTQWYFQRYVAHLPSGGEIAIFD RSWYNRAMVEPVMGFCTHAEHKDFLRQVPKFEELLVSAGIILFKFYFSVSKEEQKRRFES RRTDPLKQYKLSPVDARSQELWNQYTLAKYSMLLASNTEFAPWTILDSNDKKIARLNAFR CILSRIDYPEKIGAKELAVDPNLVRNGAREIVLMEDSQKSEAWRKLESPSRKNKKDKKKG >gi|257443718|gb|ACYG01000005.1| GENE 43 40426 - 41424 801 332 aa, chain - ## HITS:1 COG:AF2435 KEGG:ns NR:ns ## COG: AF2435 COG1518 # Protein_GI_number: 11500011 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Archaeoglobus fulgidus # 6 319 4 308 322 178 33.0 1e-44 MQKSDRTHFILSPGRLRRKDNNLYFDKFNDEGGILTSKILPINAIDEIYILARVELDTYA MAFLADNNILLHIFSAYQSFRGSFFPNTSNSVNKSGFVLLAQLRAFDDLSKRLFIAREIT RARILNAAINCKVYGVSLDTVPHLDALAHACDIAAVMAVEGGFAKQYFAAWNEIIEDQRS FKFTTRSKRPPADKINALISYVNTRIYNVCLSEIYKTELDPRIGFLHEPNYRALSLHLDL AEIFKPILGDRLIFGMLNKREITAKDFETDAWRIRFGREAVQKIELKMIEKLSSCANAAG QSLTWRQIIRREANQIKKYVCEGVPYEGLVWR >gi|257443718|gb|ACYG01000005.1| GENE 44 41441 - 41719 265 92 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1288 NR:ns ## KEGG: CCV52592_1288 # Name: cas # Def: CRISPR-associated protein Cas2 # Organism: C.curvus # Pathway: not_defined # 1 92 1 92 92 136 78.0 2e-31 MYAILFYDISSSDEKEKNNAARVRKAVEKFLPRVQFSVFEGEIRASDLKKLMAILQKECA SKLDSVVIYTFNSLKYSQRLVIGCDKNEAIFS >gi|257443718|gb|ACYG01000005.1| GENE 45 41728 - 42225 407 165 aa, chain - ## HITS:1 COG:MTH1085 KEGG:ns NR:ns ## COG: MTH1085 COG1468 # Protein_GI_number: 15679096 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Methanothermobacter thermautotrophicus # 6 164 13 173 175 76 27.0 2e-14 MFCKDQITGTLVNYYITCKREAWLYAHNIHANREDENVLMGKALADIKENDLQDFAFSNL KFDKLSKQRGHYLITEYKKSLKNPEAGKMQLLFYIYLLKTGLNLKEVKGKLISGKTVIAI EDNAENFTKIETILNGITALANEPKPPKFSPQKICESCAYRDYCI >gi|257443718|gb|ACYG01000005.1| GENE 46 42225 - 44345 1281 706 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 67 516 110 583 800 160 26.0 8e-39 MLAEADSRLLQCIKIYHDIAKLKTNFQIYIKNPTEKISDKNHALLSSYIFLLNSEFNELD MAFGFLSIVSHHANVENFCELTTQNKNFGKYFESSKELDFWDEVVDKALGLEIYKDIKRD KNELLIKAKHLREYFKFAKKKFDYDDFLNFKDIFSSLIYSDKYEAIFNQRIPVSKPVNSN TIEKYIKALENRKPNAKRSEFRKFVLNNFDLNHNLFTLTAPTGYGKTLTALNFAAKFNKE RIIYVLPFTAIIDQVCDEIKEIFKDDKNILIHKIHHKTTIDESIPQDRYSKVKFLMDSFS GDINVTTLYQFIFALFGNKNKDSVKFNRLKNSVIIIDEAQAVPYKLRADFMKLCEMMAEK FGCIFIFMSATMPIVDATKFKEISNLDYFKDQNRYVLKWFDGDESTLKDKIRQLAKNKNT LVVVNTIKKAQELFLEFYDEFKVFCLNGYMCDDHKRKDIENIKDAIAKNKSGHGDSILLI STQSIEAGVDLDFDVGFREIAPISSIIQTAGRINRNFAALGELYVFNDICDYSDLIYGDL KRISDTILVKILKQRDIIESEILDISTRYFSAIKQSLEGLFLAEQMQELGFYDINEKISE AMDDRLKILVIIEPKEDYIKEFQNEIFEINRLDMDKFNKKDIFTNTIKKINRFGVNITEF DAKRLNIKRIDGLKDVYYLPFGDTSYNNNFGIKKDAALNLKNEFFD >gi|257443718|gb|ACYG01000005.1| GENE 47 44392 - 45105 516 237 aa, chain - ## HITS:1 COG:TM1800 KEGG:ns NR:ns ## COG: TM1800 COG1688 # Protein_GI_number: 15644544 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Thermotoga maritima # 1 151 1 139 220 70 28.0 2e-12 MDIIAFELSGDYAHFSHPATIYSSLTYPVPPKTAIMGLLGAIIGEMNYFKLNDIGYSVIL SSQFRKKTMIFNGIKFALSSSMHIEQGYQDSSEKKQFYKELIKDPRYVIFVDLSALNASY KENIIDSLKAHRCVFTPYLGINFCIADFKYIEIKNCELVHEKESFIDTFVLMDDFIFDAQ SFDIRLTTARMACGCEEGRIFKDFKDFVIKLSGNSQIKAKNRGNIYQINDYKVYFAK >gi|257443718|gb|ACYG01000005.1| GENE 48 45106 - 46023 730 305 aa, chain - ## HITS:1 COG:TM1801 KEGG:ns NR:ns ## COG: TM1801 COG3649 # Protein_GI_number: 15644545 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Thermotoga maritima # 3 285 7 271 299 186 39.0 3e-47 MKKKEILFLWDGENFNPNGDMLRDNAPRIDDETGIAEVTDVRIKRTIRDEIMKKDESAIF IKEYKRDENILDCKSAIREVINVKQEKIEIEKEILSKFIDIRAFGGVLPISDKDEMKKEG IKTAGIQFVGPIQFRMSRSLHRVAVEHIKGTGAFASGSDKANKTFREEDFLNYAIFATYG IVDNHSAKITNLSEDDVKVILGALWSGTKNLITRTKMGQMPRFMLVITYKNDTFAGDLNN CITINSSKEDVEIRSINDFTIDFSRLKAKLTRYAQEIEKIEYMSDFDFEQNNRSQFDSNW IKRGF >gi|257443718|gb|ACYG01000005.1| GENE 49 46023 - 47816 941 597 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1419 NR:ns ## KEGG: CCC13826_1419 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 594 1 588 588 588 54.0 1e-166 MGDIVKIFSSIGEIYDKQKTKINNKSYEYDAIKIYLCDIKSKEISVNNNISRDDLIVCRF GIGANSGNLFPNVQFISKAVKDDTPKFIKGILKAVKNMLSCFNPDDIKNDKILTDLSSLN ESFFDDILSEIAALQEEPKKKGMKVATFFALSWECRPISAYFKSIFTSHLSDSNNGKTAK IYGYDMLANNMGIGGDANLAFCSVNELPTALQDIKVRLLPLNSANANLVKNGFMAIDKEL SFNFYGDKMAILPTLMVNDANLLEKIVEILKDPSEKKKDLQGIQNIEESINYELEFVAKA QANMPVLNTILFYKKSNAAVNVLLQIDDVLPSYISKISDLMGRYNIRAIRRKDSKDQQDD TIYMQNLFLKNIDIMDFLLSQNRMNLDDMMEKYAALIYKGNINSSYASKIEWGFYFNRVK TYQNRSIESIEKYQNFFNEIGALNEKISFEREVNLQSLSDKKELISSILKNSEFLKDNEV LQSAYLLGMMSAGLINRQFAISKNSSFEKWLNNAGAITKELLERIWTKCDETNKKLSNVS RGKRSANIEIMRDILIGILPSAFLSQKRVKSAYVTLAFAMGGSDFTKYIKDNTQGDE >gi|257443718|gb|ACYG01000005.1| GENE 50 47933 - 48664 464 243 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1294 NR:ns ## KEGG: CCV52592_1294 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 224 1 224 227 316 64.0 7e-85 MLIINAKLPTKNLKITKSLSQLIQGFLYRYLPASEHVGYRHESSGKIFKRTVFDFILRGE DLRVRFASCEPEFERKIALAVLKDGLSLGEILFTQTTVEAKNHKICENEAIVQGYVACAV SGLLGHKVYLQPQDSRHLEMMKTNILQRFETIMGRKYDGEMELNLLWQKPGESAKFYYGN NREPVYTWQARWKIVARAELINLILGTGAGSGCMNYGVGVLEVVKQDCIKAQISNPKKDD CLL >gi|257443718|gb|ACYG01000005.1| GENE 51 48737 - 50764 1640 675 aa, chain - ## HITS:1 COG:Cj1234 KEGG:ns NR:ns ## COG: Cj1234 COG0751 # Protein_GI_number: 15792558 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Campylobacter jejuni # 2 675 3 664 664 655 51.0 0 MELLIEIGVEELPAIPFLKERANIAPKWRAVLEANRINSDFRFEFSPRRFVLFHEDFPQR GDDAQIVSTGAPKSVALKDGAWSPAALSFAKKYGISESELEFRQVGGKEVLYHAEVQKGR DSREILGEMIEEFLRSLNFGRAMRWGSGEFEFIRPIRSIACVLGGQNVDFEIYGVRSAAA FFPHRKFGYEAIKFKDAVDYFALLERNGVILSEQKRKDKILSEFAKLEKKHGFKIEVDPA LLDEVTAITEYPTALLGSFERDFLSVPKEVIITSMKENQRYFPVFEGKNLSNHFVVVSNA ITDDDELVVRGNEKVLRARLSDAMFFWKSDLQAEFSPEKLKQISYMQALGSVYDKQVREL AVARALSADYATQIEAEIGKKDFAQDVENAVMFSKADLSSTMVGEFSELQGIMGSYYAAH AGLADHVCRAIREQYLPSGEDSELPSGVFSSVIAIAMKFETLLGLFSINKVPSGNKDPYA LRRAATGLIKILLNQGLSFDANALAQKLAPNYKKFDISKLLDFIKDRLYGIFDEINPSVI KACIASGENDLLLLSKAIKALGEIAAAADFGENFATFKRLANIIKDEKIGAVDENLFEHG AERALNAAFRAIKLNENDVSGYLRSLFGLKGVIDDFFDNVMINVQDVKIRTNRIANIGQI YRAFLQFADIKEIGF >gi|257443718|gb|ACYG01000005.1| GENE 52 50879 - 52213 997 444 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1247 NR:ns ## KEGG: CHAB381_1247 # Name: not_defined # Def: putative endonuclease/exonuclease/phosphatase # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 443 9 436 437 317 42.0 1e-84 MFFCGASAAELKIASFNVQNLFDGVNDGTEYADFEIGRGGWSEQKYERKLQEIADEISAL NADILGLQEIENEAVLKALAQKAGYKFYAFSRAQTAPAGVAVMSRIPIKFQKTYRPTELK TRDILRADFALGGTDFSFYVVHMLSARNPLSERKRNFAFLREVLQGHQRAIVAGDFNTNF GRNSLLNELIERDGFSDLWALHPCSQLKHFGSCESHESGAVLDHILLSDDFFSNEPGYKK DSFVVAKSSTASDHFPISFILTDEGALKSTPKKQEFLAKNTASSAKTVTIEELYGRIISE PVLIKGAVVSFANRHGFAISQDGSGVFVYGGGGLQLGDKLDLLVKKTKFYKQSFEIDDFE IVSRSGNVGYIAPYVLPSASVRQLRAGDVISTIKGDVKDGIIDLKGAGEFRIFRKSAPVQ NGKNLEFENAYFTIYKGQKEFIVE >gi|257443718|gb|ACYG01000005.1| GENE 53 52228 - 52716 491 162 aa, chain - ## HITS:1 COG:Cj0904c KEGG:ns NR:ns ## COG: Cj0904c COG0219 # Protein_GI_number: 15792234 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Campylobacter jejuni # 1 153 1 153 155 204 62.0 7e-53 MFNIVLVYPQIHTNTGSIGRMCVNAGCPLHLIKPLGFVIDDKHLRRAGLDYWASLDLKIW ESWDEFMAANGKFKQRFFFATTKTNKLYYEAKFQPGDFLIFGSEGHGLPLEIMRTNRENC ITIPMSGAGRSLNLATSVGIVTYEAIRQNIDKFDFRSAVCEF >gi|257443718|gb|ACYG01000005.1| GENE 54 53454 - 54575 764 373 aa, chain - ## HITS:1 COG:Cj0789 KEGG:ns NR:ns ## COG: Cj0789 COG0617 # Protein_GI_number: 15792127 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Campylobacter jejuni # 1 371 1 370 372 315 45.0 8e-86 MQVSKTDLKIYQNDDFIALLDYLKKFSSRIYLVGGCVRDHFLGRASADVDVELYDVGPHR FEQIMQDFGAQGVGKSYFVYKYKSFDISLPRTESKTGIGHKGFSVALATDEREASRRRDF TINAMMINAISGKVLDFYGGLADLHARILRVVDPRTFVEDSLRVYRAVQFAARFELRTEH HTLELMRSIDVSDLSCERVKAELIKFFRAPAHRYGMMLMQELGLYERVFGLRIDTRTHER LIKFIEHGESFVRNEMFFLYAFLNFLGLDKDKILKNLGLNSLYKRLLSEPFFKRVSDERL CKIALKMPLKQWLGLYCKGRVQAAKRLGIWDKKFKSLVCATDVARNLRGAAIGKEIERLQ EAEIRAFVAALKA >gi|257443718|gb|ACYG01000005.1| GENE 55 54535 - 55884 942 449 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1262 NR:ns ## KEGG: CHAB381_1262 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 392 448 152 208 209 71 71.0 9e-11 MYENELEDIIEAVNEMKAQKRAQNLTAQQERATNASSTEAGSQDALSPASFAPDPIAPDA LNSASAPDIASSNAQNFTSLDTKNSTSRFVSSDALNSTLDRSNFMASNSSAPSGAEFAAD ATLKKSVVKDENFTFSSEENSKDSDLTSRENSVASVSLNGENFINFTSASGKDSVNTAFA SDEILKSSAAKFDESFRDLSGIAGEIYDSLGSDMNGFISPQSRDASMAQSSAESKDFELA LNSTDDDSQSEQDLTPRILGAHFKELSNDDFGPGSDFKESEADDYFSTAHSKKQDLASLQ AQNSVALEIRNAATRQQNFVSQSQNFTMPGVRGDELATPQLRNSTAQDMQAGSFASYGAK NSAVRQPEEARHLGAARQVGDKSKYLANADFKISSEAEFLSAIKERILVLFEGLNAFEKG DLNARVELNLKFMEFLLASIENRLENLSK >gi|257443718|gb|ACYG01000005.1| GENE 56 55877 - 56095 155 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458799|ref|ZP_05623922.1| ## NR: gi|257458799|ref|ZP_05623922.1| hypothetical protein CAMGR0001_2384 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2384 [Campylobacter gracilis RM3268] # 1 72 9 80 80 139 100.0 1e-31 MELEKKGDIYGAMRICRGILRDNPQDGDAAVLFARLNLNHRVSSGVNMAMLERFLSVDAR KQAEFKRWLIDV >gi|257443718|gb|ACYG01000005.1| GENE 57 56129 - 57199 1425 356 aa, chain - ## HITS:1 COG:PA3118 KEGG:ns NR:ns ## COG: PA3118 COG0473 # Protein_GI_number: 15598314 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Pseudomonas aeruginosa # 6 349 5 353 360 399 57.0 1e-111 MKKYDVCVIKGDGIGPEIIEEAIKVLDAVSHKFNFELNFDYRLMGGAAIDIMGVPLPDET LNAAKSSDAVLFGAIGGAKWDGLPRELRPESGLLKIRKELGAFANLRPAMIFDELINAST LKPEIIKGVDIMVVRELTGGIYFGQPRVKNEKDALNTMCYNAAEIERVAKVAFEAALLRN KKITLVDKANVLETSQLWREVVSELAKNYEGINLEFMYVDNAAMQLVRAPAQFDVILTEN LFGDILSDEASMICGSIGLLPSASIGGKVGIYEPIHGSAPDIAGQGIANPIATILSAAMM LKYAFGENEAAEAIELAVRGVLRDGYRTKDIAQYDAKEICSTTEIGSIIADYAAKA >gi|257443718|gb|ACYG01000005.1| GENE 58 57209 - 57691 579 160 aa, chain - ## HITS:1 COG:PAB0892 KEGG:ns NR:ns ## COG: PAB0892 COG0066 # Protein_GI_number: 14521550 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pyrococcus abyssi # 2 158 5 162 164 195 56.0 3e-50 MAKVWKFGDDIDTDIIIAARYLNTSDAAVLATHIMEDADRDFSSKIARGDIIVAGKNFGC GSSREHAPMALKAAGISCVIAKNFARIFYRNSFNTGFLILECDETDKIAQGDELSIDLKG GVIKNLTQKTEYKFAAIPEFMQKLLDAGGAINYAKTKINL >gi|257443718|gb|ACYG01000005.1| GENE 59 57953 - 58129 58 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGLKASFGLAIKSPCVIVYLVLEDQIIPKRSLFLLIYGANYLNLMIFQILEIRLNFKI >gi|257443718|gb|ACYG01000005.1| GENE 60 58098 - 59978 2653 626 aa, chain + ## HITS:1 COG:Cj1001 KEGG:ns NR:ns ## COG: Cj1001 COG0568 # Protein_GI_number: 15792328 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Campylobacter jejuni # 11 625 10 619 622 733 75.0 0 MASPKDALSPIEQFFDENQKSYITYERLIKFFDKAPTATAVKKVEALTKKFDVELISAAE ISKIKNLEDAKLKEATQKKLLDEGWDEEFDLSSDVELLEWSRSDSPVRMYLREMGQIPLL TKEEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDDSDEE GEEEDEEELPEDDYDDEEDEESADEAKQRRSKKNDKRALKVIESFKALEKAKKDWMKFAE KNAEAIKESKGILSKLNLAFKKKILKEKLMDLGPTSKLITEIVKSMETALKSDEGFEKEL KRLEYKLPMFSAELRENHKKILKEITKLSKDDIIARVPEATMVSTYVDIKKLFLTKEASK KSFNLEPERLKEILEQIKRGKRISDNAKARMAKSNLRLVVSIAKRYTNRGLPFLDLIQEG NIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKITR KYMQEGGKEPDINVIAQEVGLSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDKSS VSPIEQILKSDLKEQIDDILEQLNDRERTVIRMRFGLLDDESDRTLEEIGKELNITRERV RQIESSAIKKLKHPKIGRKLKTYIES >gi|257443718|gb|ACYG01000005.1| GENE 61 60613 - 61734 773 373 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0024 NR:ns ## KEGG: CCC13826_0024 # Name: not_defined # Def: recombination protein RecR # Organism: C.concisus # Pathway: not_defined # 1 373 1 373 373 538 86.0 1e-151 MIASFEVCGYASISQNIKIDFTAKQNQRLKNTKYESNYFSDTRIAKSVVLFGKNATGKTN ILKALESILRIIEKGLNIEKELQFISSDIGYTEYRIVITDSKKDSYAYEIKFNKEQIISE SLTKNEVLIYRFAEDKLTFPIATEYEKILSVVPRDTVLNKIKDNGIKELRSFQSMVNIYE YSKNINAFEVMASQVRVISFKLFERNFFMKHKDTVLNILEIIDDSITDFDFIDIKDDRFS LILKRDEKTFVFEKESSGVKKIIELMIGLVYAIDDIGITEESVMLIDELDSSISTISLIR LLNGVINSSSNIKGQFILSSHNPLIFDTDMLAPAQIYIVGKENTATTLKSLSEFELRNDK KKAYMGYLRGDYE >gi|257443718|gb|ACYG01000005.1| GENE 62 61811 - 62320 187 169 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0025 NR:ns ## KEGG: CCC13826_0025 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 169 29 197 197 228 69.0 6e-59 MSDEFVFEIKNIKNGNYKSFIDILEQYRGTPIPVFVVADLDRAVNNNAELKYLKTLCTKL SYINKYSNIFLTYQNFETFLSAHFANSADICKVLDIDRCNIKNNQNIYDSIKNNGGCYEN AIRNLSETNICYCKRNFIFPKQLDTNKITAKQSSLIILKKYCEFLKNNR >gi|257443718|gb|ACYG01000005.1| GENE 63 62763 - 62948 66 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFKVKRTDLHRINISLRPDVYRKLVPQAELLYNAFISLHRGDITPTTKQFLTSSLKLPA Y >gi|257443718|gb|ACYG01000005.1| GENE 64 62995 - 64443 1461 482 aa, chain - ## HITS:1 COG:no KEGG:FN1289 NR:ns ## KEGG: FN1289 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 30 389 39 352 571 136 28.0 2e-30 MKKANNLSKFDKKALKLLFAVLFVPLFISLVFIYELSVYDSSRELPADAQKIGRSDYYNI GGKIYLRSWNLAPYELEGGADAASFRALDTGRYSYTNVGMDASSVFCGARKMSGLDPART QKIGSRYYSDGRVSYFCSDVTQRTGGAISYIYKVFLHAFGLSKWPQEYNYPYARLDTSAP ISPLTESPYVATDGERVFYEGKILAGADAKNLKQIRLKIIHEDGPDSPAHFRSVDRWLSD GRSVYADGERLNFTPSEQMYLVEPNAGIEFLYDPATGAVLMNGERFDAANEPYTPLNFQS GHQEYMLFASKNGIFYLSKDKILNRPRGSGAEGRLKDALWYVYYKFGADASRLSALKRAG DNPFKGAVRQISEKLLKDDAGFYYLNFYSHSVYVTGRSGRHLDKRTNFIELRKITLGVHD DEVMAQIADEAARNPEMSQQIFTAQDVEYENGAAFYMYCLAAVLLLGAWIYSYLRKRSLR RS >gi|257443718|gb|ACYG01000005.1| GENE 65 64627 - 65868 816 413 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 1 406 1 420 447 318 40 6e-86 MEKYEGYNLRLRDALVGVQFLFVAFGALVLVPILTGLDTSVALFTAGIGTLLFQLITRKN VPPIFLASSFAFIAPLSFGVKEWGIAATMSGVIAAGLFYVVLSLLIRLKGEGFLHKILPP VVVGPVIMTIGLILSPAAVNMVMGKGKEALYTQGQSLTIALISLSAVIVVMMFGRGMLRL VPILCGIAAGYCASLFVGIVDFTPILNAPWFVLPHFTAPVFKLEAVIYMVPITIAPAIEH IGDMLAISNVTKENFLKNPGLKSTLLGDGLATSLAGCFGGPPNTTYSEVTGAVSITKAYN PAIMTFAALAAILLAFVGKLGAALSTIPAPVIGGIMLLLFGIIASVGMETLIKNGVDLAE PRNMIIVALIFVCAIGGMVLDFGAMSFSGVGLGALIGITLNLVLPKTKHFDGY >gi|257443718|gb|ACYG01000005.1| GENE 66 66478 - 67368 1030 296 aa, chain - ## HITS:1 COG:Cj1196c KEGG:ns NR:ns ## COG: Cj1196c COG0240 # Protein_GI_number: 15792520 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Campylobacter jejuni # 1 295 2 296 298 345 59.0 6e-95 MKIAVIGAGKWGSALFDALSVKNECVITSRTPRQIPHFVSVSEALECEALVFALAAQQTA QWLDQNFTYKNQKILVASKGIDAASGRFLNEIFESHVARGNLAYLSGPSFATEVMQKLPC ALVVSSCNENLAELFASTFPAYIKTYTSGDIIGAEVCGAYKNVIAIASGVCDGLELGNNA RASLIARGIVEIARFGKFFGARDETFLGLSGVGDLFLTASSALSRNYRVGLGLARGKGLE EILRELGEVAEGVATTEAVVNIATKHKIYAPIATEVAQILRGKDVKASLKDLLRKK >gi|257443718|gb|ACYG01000005.1| GENE 67 68360 - 69781 1952 473 aa, chain - ## HITS:1 COG:Cj1197c KEGG:ns NR:ns ## COG: Cj1197c COG0064 # Protein_GI_number: 15792521 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Campylobacter jejuni # 1 473 1 472 472 683 71.0 0 MFETVIGLEVHCQLNTKTKIFCSCPTSFGDEANSHVCPTCLALPGALPVLNEEAVKKAIS FGTAVNATINRKSVFDRKNYFYPDLPKAYQISQWTIPIVEHGELFIAADGQSKRIGITRA HLEEDAGKNNHESSRSLVDLNRAGTPLLEIVSEPDMRSADEAVAYLKKLHSILRFLNISD ANMQEGSFRCDVNVSIRPQGEQKLYTRVEIKNLNSFKFIQKAIEFEIERQIEAWQDGKYE QEVVQETRLFDTAKLITKPMRSKEDSAEYRYFPDPDLLTVIVDDEMLAAAQQIPELPDQK KARYVRELGVKEKDAEIIISTYENARFFEDLIAAGHEPKLCVSWLTVELAGRLKNGVTIE DSPVGSAKMSELLSAIEGDAVSQKAAKEVLDYLMEHDEAVSSVIDKLGLRQVSDDGAILE IIARVMSQNEDKVADYRGGKDKLFGFFVGQVMKEGKGAFNPAKVNELLKQKLG >gi|257443718|gb|ACYG01000005.1| GENE 68 69895 - 70119 103 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458819|ref|ZP_05623942.1| ## NR: gi|257458819|ref|ZP_05623942.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 74 1 74 74 108 100.0 2e-22 MSINFKRNFLYFLVGASFGLIFVGAFVFFAYPSFYFLGLKFLFICTAPGVICVIITCLMV DVFDLKEKLLHGGE >gi|257443718|gb|ACYG01000005.1| GENE 69 70109 - 70789 699 226 aa, chain - ## HITS:1 COG:Cj1204c KEGG:ns NR:ns ## COG: Cj1204c COG0356 # Protein_GI_number: 15792528 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Campylobacter jejuni # 2 225 1 224 226 258 63.0 7e-69 MLKDVFLFGGLISYDHTFIYLFYFFLVVAIIVAVALCSTRSLQLVPHGMQNIAEAYLSGV LTIGKDAMGSEEQAKKYLPLIATLGFVIFFSNVIGLVPGFESPSASLNLTLSLTLCVWLY YHFEGVREHGVINYLKHFMGPVKILAPFMFVIEIVSHFSRVVSLSFRLFGNIKGDDTFLL VMLTLAPALIPMVPFALLTFMAILQTFIFMVLSYVYLAGAVIVDEH >gi|257443718|gb|ACYG01000005.1| GENE 70 71153 - 71314 83 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAPWRIPRIPRIPRIPRIPRIPRIPRIPRIPRIPRIPRIPRIPRITLSSKNHS >gi|257443718|gb|ACYG01000005.1| GENE 71 71389 - 72219 754 276 aa, chain + ## HITS:1 COG:Cj0757 KEGG:ns NR:ns ## COG: Cj0757 COG1420 # Protein_GI_number: 15792095 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Campylobacter jejuni # 18 276 6 264 264 204 41.0 1e-52 MLYNTGNLTKRVLKVKTNKRDMILESIISAYLDSNTPIGSSELGERMGVAMSASSIRIYF KRLSEEGALTQLHVSGGRIPTVATMQDYWRARLSFDDEIKIDDARELEAVLEDFEIYCMI FNAENEALSEVINHDDRFIILTFRTDEIILKYDFRVFKFLSNLIGISLGDLELASMQIGL RELSTKIKELKNSKIEFLCNEVVAYKIFKDERFKILLNPSIAVNFTKNLIFAPYFEHGFM GIKRPVKFEGEDATMICAGSVYENYEKFFNYAKGVA >gi|257443718|gb|ACYG01000005.1| GENE 72 72216 - 72791 724 191 aa, chain + ## HITS:1 COG:Cj0758 KEGG:ns NR:ns ## COG: Cj0758 COG0576 # Protein_GI_number: 15792096 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Campylobacter jejuni # 17 191 2 176 176 122 46.0 4e-28 MSHKFKEHGDKNAACDSEEKEVCEQCASEASEPQEAQTCDDTDAQIQKLQNELSEITDKF YRANADFENLKKRLEKEKDSAVAYASESFAKDLLPIIDALEEAAKIDVEGNELADKIEVG VKQCLSLFIKTFEKYGIVPIATDAGFDPSVHNAISMIEAEGAKKGDIVQVYQKGYMYKQR VLRAAMVVVAK >gi|257443718|gb|ACYG01000005.1| GENE 73 72836 - 74722 2671 628 aa, chain + ## HITS:1 COG:Cj0759 KEGG:ns NR:ns ## COG: Cj0759 COG0443 # Protein_GI_number: 15792097 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Campylobacter jejuni # 1 628 1 623 623 874 81.0 0 MAKVIGIDLGTTNSCVSIFERGESKIIPNKEGKNTTPSVVAFTDKGEVLVGDSAKRQAVT NPEKTIYSIKRIMGLMMNEKNAQEAKKRLPYKIIDRNGACAVEIAGKVYTPQEISAKVLI KLKEDAEAFLGEPVVDAVITVPAYFNDSQRKATKEAGTIAGLNVLRIINEPTAAALAYGL DKKESEKIVVYDLGGGTFDVTVLETGDSVVEVLATGGNAFLGGDDFDNKLIDFLTSEFQS ETGIDLRGDVMAMQRLKEAAENAKKELSSAMETTVNLPFITADATGPKHLMKTITRAKFE SMIDSLVDETISTLKKVVSDAGLSMNDIKEVVMVGGSTRVPLVQEEVKKAFGKELNKSVN PDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLSLGIETLGGVMTKIIEKGTTIPTKKSQTF STAEDNQSAVTINVLQGEREFAKDNKSLGNFNLEGIMPAPRGVPQIEVEFNIDANGILTV SAKDKATGKATDIRITGSSGLSDAEIDKMVKDAELHKEEDNKRKETVEARNQADSIAHQT EKSLSEMGEKVPSDLRAKIEGALNDLKAVLKDENASKEAINSKVEALSKVAEDLYKAASA NQGAQGGSQSSGSNGGKKDDDVIDAEVE >gi|257443718|gb|ACYG01000005.1| GENE 74 74741 - 74926 63 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458826|ref|ZP_05623949.1| ## NR: gi|257458826|ref|ZP_05623949.1| hypothetical protein CAMGR0001_2411 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2411 [Campylobacter gracilis RM3268] # 1 61 1 61 61 107 100.0 3e-22 MCDSNLVCWELNFEVAVKLGRMKNAQAYEAMKFYARFAELLLPRAGKIAFQALAKLPSAR L >gi|257443718|gb|ACYG01000005.1| GENE 75 75248 - 76066 1027 272 aa, chain - ## HITS:1 COG:Cj1540 KEGG:ns NR:ns ## COG: Cj1540 COG2998 # Protein_GI_number: 15792848 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type tungstate transport system, permease component # Organism: Campylobacter jejuni # 21 272 19 269 269 352 69.0 6e-97 MKKIFFVSLALSASLFAADNDLVMATTTSTDNTGLLDAIYPAYKAETGVDVKWTAVGTGA ALKLGENCDADILFVHSPKVEKEFVEKGFGVDRTPVMYNDFILIADKSIAPKFKGKDLKG SFELIKAEKIKFFSRGDKSGTDNKEKGIWKKVEGAVPENEAWYNQTGQGMIATINAAAEQ KGVTFTDRGTYIKYEDNKKGNPDMVIINEGDNDLKNFYSVIAVNPKHCPKADYENAQRFI KWITSEKGQKFVGDFKLLNKPLFTPDANTRKN >gi|257443718|gb|ACYG01000005.1| GENE 76 76150 - 76842 769 230 aa, chain + ## HITS:1 COG:Cj1539c KEGG:ns NR:ns ## COG: Cj1539c COG4662 # Protein_GI_number: 15792847 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type tungstate transport system, periplasmic component # Organism: Campylobacter jejuni # 1 227 12 238 239 240 64.0 2e-63 MDFILEGILSAFGLLLSGDAETFSAIKATLYTSSISILFAIVIGFPIGFILGFCEFRARR TLRLLSDVALAMPTVAIGLILYAFISRNGPLGELGLLFTLKAVMLGQFVLALPIIVSLSA SVIENMDKKHYLNIMNYRLSPLNLILCVLYELRYALLVVIATAYGRIVAEVGVAMMIGGN IKYFTRTITTAISLETNKGEFAMGIALALVLILIAFAVNLAIHALKRLDR >gi|257443718|gb|ACYG01000005.1| GENE 77 76839 - 78113 1285 424 aa, chain + ## HITS:1 COG:Cj1538c KEGG:ns NR:ns ## COG: Cj1538c COG3839 # Protein_GI_number: 15792846 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Campylobacter jejuni # 107 402 1 306 331 206 40.0 8e-53 MNADKQTRPSKNFAGKNRAERERENFMSENFKSTNSIGENSTSANFASKNFAVGNSKSKN SATENSISANSAGKNSTNKIYASENSARKNFANENSAAVRSVPNSELISVRDLVLRYGRS EILNIPSLDLNTSGITALLGSNGSGKSTLLRILSFLQRPSSGSVELWGQRAPSLQTLRQT CLLLPEPVLLKRSVEQNFKFALKSRGALAEFDERVDEALGLTGLDRGFLSKKHFELSSGQ TQRIAFALALAQRAKLYLLDEPTNSLDLAASKLFARAILFMRSRYGCGFIIASHDEKWLS AIAQRSVFLHRGKICEFEYKNIFDVQNGVLKFSDEISLCLEEGLARARKIAINPSKILLS KSPFERCFAGILHSVSLQYGSSLLIKIKAGDLLLKCVTAQDERCWSAGERIYFGFEDGAF LGLE >gi|257443718|gb|ACYG01000005.1| GENE 78 78639 - 79964 1651 441 aa, chain - ## HITS:1 COG:Cj0791c KEGG:ns NR:ns ## COG: Cj0791c COG0520 # Protein_GI_number: 15792129 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Campylobacter jejuni # 2 422 3 421 424 432 52.0 1e-121 MLSLDEIRKNIILKPGVHYFDYTASGLAYEPVEREIGEILKTYANTHSDSSSSAIITQRR YEGARESLKKLLGLDERFYLIACGQGATAAIKKFQELLGIYLPPATRGAIGEANLRAAQL PLVLVSPYEHHSNELSFREGLCDYLRVPLSESGEIDLLALERILKLNAGRRIIGSFSAAS NVTGVISDYKKISELIRAAGGIVAFDCAALSSHANLDCDHFDAIFLSPHKLLGGPASCGL LAIKKQLLNSDVPTFAAGGTVAYASREGHVFLKNPEQLEEGGTPPIIGLMRANLAYALRN EVGFEQIKSAEDELAGLFESELAGIDEIINYAPKGAPRLPIISFNVRGVSAYDFAASLSN DYGIQTRAGVMCAGPYAHDLLGIKEGRMPESKPGFVRVSLHYTHTERDVRYLTGAIKSCI KKHRELWGEEKAMYEMFGGKI >gi|257443718|gb|ACYG01000005.1| GENE 79 80120 - 81577 1145 485 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1159 NR:ns ## KEGG: CHAB381_1159 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 33 324 29 350 448 223 43.0 1e-56 MKSFKLRFIYAICVVVACALYLLAERSGLVERKQTHFTVTSDTNVSKVPGLSKYVTQEEV DSFAFRYWDIDYNSNPKNAFKEPAIDVELKRLLKSKQTDKILKFMKDNNLTVDHTMHGGV TPVMYSSFWDDTNTTQELIKLGADIHKKDEYKLSAMAYAIENNATKTVRLLLDNGVKFEE VKMVQGYIVCPRYSDDTEIIVGNNIDIKLRTECLINHNHSKDPVYPLNYAIYSNLIEIAD MMLQKGMKPKAYEGPLYYLSNSSIPFQRKEIFKRSIYTFLPRDMMYKDKLKLLIKHNIDG LPDKDDFIVARNNCLNNTAMSIKEKESYINHMNDYCYGEKILESYDWALRGRWEVKNNEE KDKGTDRYWKEKDFIKFFGYMPNDKKCTKLEPDIKILNFYNMKIDRYKALCGNGLSDEEI LQKSSLKDKNSTEAFDIETFFKYLNFEEMLEKAKVKILHNGEKIDIKDYAEILRQEAAKK LDSNQ >gi|257443718|gb|ACYG01000005.1| GENE 80 81971 - 82159 381 62 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0213 NR:ns ## KEGG: CCC13826_0213 # Name: not_defined # Def: sodium-dependent tyrosine transporter # Organism: C.concisus # Pathway: not_defined # 1 62 1 62 62 89 82.0 3e-17 MFVKLNDRTYLNKDRITRIKVDSVQDGIRIRFYEGQFQVAKSGRFESEEKAMEWLQKNFI GK >gi|257443718|gb|ACYG01000005.1| GENE 81 82177 - 82968 902 263 aa, chain - ## HITS:1 COG:Cj1507c_2 KEGG:ns NR:ns ## COG: Cj1507c_2 COG2005 # Protein_GI_number: 15792821 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Campylobacter jejuni # 140 248 1 109 112 134 62.0 2e-31 MEIDIKIDDKKVSEIKRLILNLLNPSGKLDCGAAFKIAAKLGVDASVVGDLAAREGIRID RCELGQFGKLQCSGGSIKALKKLDPFLDEKRRIFCRDARAVASGGVGFDTVRSTLKEHAI DVKYCQLGCFKEKKGKRMRVKTKTWIENAQGELIFGKGKTEVLDVIAQTGSISKAAEVLG MNYKKCWSHLQILQKNLQEELFSTKQGGGNAAGTTLNARAYELIAAYKQLQSDIENYANE RFKELFLKKEGEKDASKAADKNH >gi|257443718|gb|ACYG01000005.1| GENE 82 82978 - 83760 1070 260 aa, chain - ## HITS:1 COG:Cj1508c KEGG:ns NR:ns ## COG: Cj1508c COG1526 # Protein_GI_number: 15792822 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Campylobacter jejuni # 1 258 1 258 260 331 64.0 6e-91 MEPIYRAEIVKFKGDERRIINDILVREIKLEILLNGKRFGALMATPSDLKALAVGYLLSE NLISDPSGIRGIELAPDGLSVNVCGEINEKRLNSFDAEKVIISGCGRSSTANIDPEAMAA RKVRSDAKFHKNEILNLMSEFYTQCELYEMTGCVHTAKLFTASGEYFIGEDIAQHNTIDK SVGKAVLAGHDTQGSLLLVSGRLSSEMVAKAVMSGVSALVSRTAPTSLGVVIARKFDLTL CGFARGENLNVYSGEERILS >gi|257443718|gb|ACYG01000005.1| GENE 83 84024 - 85796 2039 590 aa, chain - ## HITS:1 COG:MJ1353m KEGG:ns NR:ns ## COG: MJ1353m COG0243 # Protein_GI_number: 15669895 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Methanococcus jannaschii # 1 562 148 673 673 475 45.0 1e-133 MTNDLVEFATDTDVFLLIGTNTSECHPIIAMQMQRGLQRGAKMIVVDPKRTDMAKKADIY LQIPVGANIKTLNTIMNVIIAENLQDDEFIKNYAHGYEYLKEAVKDFTPERFERETGVKK ELVIEAARMYAKAGAAAICYTMGITQFSDGTSNVFSLSNLAILTGNLGKRGAGVNPLRGQ NNVQGACDMGALPNVIPAGAVNSAYAQEQARRVWHFELNPTPGFKLTIAPDKMDSGELKL LYVYGENPVMSDPWTEHFVHATHHLDCFIVQDLFFTESAQKADVVLPAAGWGEKDGTFLN TSRRVQRTRKASEPAPGVEPDWKVVCNIAQRMGLEGFDFLSAEEIWNEVRALMPKFFGGI SYYRLDKLGGISWPCPDEDHPGTPVLYADHKSMLPDGKFRMVPVLYVDDKEGRAKAEADF RAKMKIPDDYPVGSGALSEIPDEIYPCLFTTGRKVYHYHTGTMTRECRALEYGAGAEGAL IEVSPDIARERELTEGCYALVKNKRGQIAAKLRINPDLKEGTIFTTFHYSEADGNELVHA GDLDPLSGIPPLKMTIANIRKLSESEFIEFRRQNEMSMHSEKPYLSPVHR >gi|257443718|gb|ACYG01000005.1| GENE 84 85845 - 86276 403 143 aa, chain - ## HITS:1 COG:STM4285 KEGG:ns NR:ns ## COG: STM4285 COG0243 # Protein_GI_number: 16767535 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 6 143 2 139 715 135 49.0 2e-32 MQSREKIVKTTCPYCGTGCGIDLIVKDGRIVNARPTQAHHVNDGELCLKGMFGWEFVNSP KRLAKPMIRKKNGVFDRSGKLEEVSFEEAYDFVASKFKETVAKYGPSSIMGFSSARSNNE DNYVFQKFFRAQGSNNVDHCARL >gi|257443718|gb|ACYG01000005.1| GENE 85 86810 - 89593 2960 927 aa, chain + ## HITS:1 COG:Cj0780 KEGG:ns NR:ns ## COG: Cj0780 COG0243 # Protein_GI_number: 15792118 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 1 927 1 924 924 1455 73.0 0 MDRRDFIKSSAAAAACSVAGISLPSSLSAADEAEKGWRWDKAACRFCGTGCGIMVATKDG KIVAVKGDPLAPVNRGLNCIKGYFNAKIMYGADRITKPLLRVNSKGEFDKKGKFIEISWQ RAFDEMEKHFRRAYDEGGPEGFAVLGSGQYTIPEGYAAAKLVKAGFRSNNLDPNARQCMA SAVVGFMQTFGIDEPAGVFDDIELTDTIIAWGANMAEMHPILWSRVSDHKLRNPDRVKVI NLSTYSSRTSNIADIEIIFRPNTDLAIWNYIAREIVYNHPDMIDEKFIKEHCVFATGPVD IGYGLREDINHKKYRKTELDTAAKQKSKILSKSEGVTLAYLGMKEGDVLENKHSDKSDAH WLISFEEFKKALEPYTLDFVSPLAKGDESEDLEAFKTKLKQLADYYIEKNRKVVSFWTMG FNQHSRGTWVNEQSYMVHFLLGKQAKPGCGAFSLTGQPSACGTAREVGTFSHRLPADMVV ANPAHRKVSEKIWKLPEGTINPKPGAHYVQALRNLEDDKIKWLWVQVNNPWQQIANANHW IAAAREMDNFIVVSDPYPGLSAKVADLILPTAMIYEKWGAYGNAERRTQWWRQQVLPVGD AMSDTWQMLEFSKRFKLKDFWGEVKVNDKLTLPNVLDKISEFGYTPETTLFEVLFANKDA QAFAAKDSIMASFDNSEVNGDSRGVIGSDGKEFKGYGFFIQKYLWEEYRKFGTGHGHDLA DFDTYHRVRGLRWPVVDGKETLWRFNAQYDPYAKKAAPDSDFAFYGNAKAALPSGDLKSA TSGEEKTSLANKAKIFFRPYMDPVEVPSEEYPFWLCTGRVLEHWHTGTMTMRVPELYRAV PEARCYMNEADGAKIGVQQNEIVWIESRRGKVKARVDFHGRNIPPKGLIFVPFFDEKVYI NRVTLDHTCPLSKETDYKKCAVKIYKA >gi|257443718|gb|ACYG01000005.1| GENE 86 89597 - 90355 751 252 aa, chain + ## HITS:1 COG:Cj0781 KEGG:ns NR:ns ## COG: Cj0781 COG1145 # Protein_GI_number: 15792119 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Campylobacter jejuni # 12 246 17 246 246 244 50.0 2e-64 MDRREVLGILSLAAGIGVLGLGVANSGEHARLRPPGAISEKEFLSKCLRCGLCVEACPFD TLKLASFCDHAIANGTPFFIPREIPCYMCDDIPCVAACPSDALDKSLVSEDSKLNVRLSK MGVAVIDTEHCIAYAGIQCDACVRSCPVMDKALRIDYRHNNRTEKHALLVPVVDSDYCTG CGKCEHACVTKKAAISVVERERVIGISSDNYVKGWIKGDDAKLKDADTKIKLDSQKSKDY LNEDDLMEGARQ >gi|257443718|gb|ACYG01000005.1| GENE 87 90352 - 91161 627 269 aa, chain + ## HITS:1 COG:Cj0782 KEGG:ns NR:ns ## COG: Cj0782 COG0348 # Protein_GI_number: 15792120 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Campylobacter jejuni # 1 268 2 258 260 216 44.0 3e-56 MKYTILRRLSQISILVLFILGNNFDFKAASENGILSGILKGNLSSSKLLGTINLSDPFAT AQMLLASFSLGATAVIGAVIVGAFYALIAPRAYCSWVCPINLLTDLAAWLRKRLAITTRI VSVNRKARYVLAALALICSGAFGFAAFESVSFISLFARAVISLSASAFAIALLIVVFEIF AGDRTICSRLCPLGGFWAVLSYFSIIRVRHEIDKCTMCGKCKMVCPEVQVLKMVGRENGR VSSECISCGRCIDVCDDDALNFSILGVKK >gi|257443718|gb|ACYG01000005.1| GENE 88 91158 - 91691 737 177 aa, chain + ## HITS:1 COG:Cj0783 KEGG:ns NR:ns ## COG: Cj0783 COG3043 # Protein_GI_number: 15792121 # Func_class: C Energy production and conversion # Function: Nitrate reductase cytochrome c-type subunit # Organism: Campylobacter jejuni # 1 175 2 174 174 145 43.0 5e-35 MKKMVLGLALACCAALFAADKTASIDADSLGFIKSVDESAQNKNSLPDFKYSEDAPGAAS KIERSFENAPPLIPHSLEGLVPITKDNNMCITCHMPDVAKDVGSTPIPKSHLVDFRTGAD LNGTLAEQRFNCTQCHVPQAQTNPLVKNNFKADFSRFSDANSTSNLIDTLNQGAEVE >gi|257443718|gb|ACYG01000005.1| GENE 89 91701 - 92888 1235 395 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_1156 NR:ns ## KEGG: CFF8240_1156 # Name: not_defined # Def: putative periplasmic protein # Organism: C.fetus # Pathway: not_defined # 152 395 58 299 299 145 36.0 3e-33 MKFLPPLLLCACFIYAGNGVAAPSGAVGIDAPAKIKHARFILELDANVAVLKNLDGEIYA GLDNGKLYKITINSAENSARNSATGQNFADQNSDAAQNFNAKASVNSTGNSTANSAAVNS LANSAKQNSAENSTTLNSASNFASGAISKTLIFALPSSKNYLDEPMGATIFDVDKLGEKY AFLYNGDAFEKMLGIFAGGKITHYKLPMTGIKNVYFYDENTVILLGLGSEILYFDLPSGK VSFEQKLTIASLGGSAYDRASGTLLISCEGGIVFYFDAKAKKLMSQKSLHKDGIYSVALL GDRMMSGSNDKERSCYYENGDFAKFYNARFAVFAVALSPELGAFTVGNGVRVIDKAGEIV RSIELDNDIINYLLFEGDYLVGSGYNRYIYFWELK >gi|257443718|gb|ACYG01000005.1| GENE 90 92885 - 93220 587 111 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_1155 NR:ns ## KEGG: CFF8240_1155 # Name: not_defined # Def: NapD # Organism: C.fetus # Pathway: not_defined # 1 111 1 111 111 74 39.0 1e-12 MNISSVVIYLDANTDVAAFRKQLQSIDGCEFVACEDGKAVATISAESFEDEIAAFRAIEA IEGVSEAMMIYSYSDLDADIAAANSDNGEQIMRELDKKDLSQIKYGGKVRV >gi|257443718|gb|ACYG01000005.1| GENE 91 94055 - 95458 1517 467 aa, chain - ## HITS:1 COG:Cj1363 KEGG:ns NR:ns ## COG: Cj1363 COG0628 # Protein_GI_number: 15792686 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Campylobacter jejuni # 122 462 2 342 347 289 48.0 9e-78 MPTPKDNAASRNENLAENVAQNNAENNAKSEARNFIENQTVNNEEGKIEAAAEKRAKIGA ENKSKNRVKTDKASSAGAAAFSDAAEANETFSANASALGAAAASGAAAGVKAGLAKASGR AKTNKIFFIGATLLMFCCVIYLFSPFLMVIVIGVLMAVATSGLHAKVTKLCRGRRTLASV LSLFLLCALFFVPFIYAVIEIAKNAASFDMARLNDALSYVQSLDIRLPGPFEKFNTQFRS FLANLDVAGVAKQIISYLSVVGKSSAKFIVDMVLIIVFCFFAYLYGESFKRFFKKILPVE PAQIDYIFSETANTMSVVFYSTIFNAVLQGFLFSIIAGIFGFDALLMGVLFAFCSLIPAV GGALIYVPTALYVLAGGSTSGAIVIMAYCVILISTLADSFVKPLVIKFINSRLVENPANI NEMLIFFSMLSGISTFGFWGVILGPAILTLFIAVLNLYDYLKKIEFE >gi|257443718|gb|ACYG01000005.1| GENE 92 95654 - 96097 318 147 aa, chain + ## HITS:1 COG:Cj1622_1 KEGG:ns NR:ns ## COG: Cj1622_1 COG0117 # Protein_GI_number: 15792927 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Campylobacter jejuni # 3 72 103 172 177 75 42.0 3e-14 MCSYAAFEPCAHRGRTPSCAELLAQLGLSRVVIGTRDTNAQAAGGAEILLCGGIEVKFDV CHAAAEELAEPFYLAREGGFCFIKINVALNGAVHGRIGSEKQRAFVHELRGVCDYVGVGG QTVRADRPNWMLQPNFGDKSSTNHIKE >gi|257443718|gb|ACYG01000005.1| GENE 93 96411 - 97427 1319 338 aa, chain - ## HITS:1 COG:Cj1362 KEGG:ns NR:ns ## COG: Cj1362 COG2255 # Protein_GI_number: 15792685 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Campylobacter jejuni # 1 338 1 335 335 443 70.0 1e-124 MDRIVEIEKMQLDESVESSLRPSSFEDYVGQEKIKSNLAIAIAAAKKRADVLDHVLFYGP PGLGKTTLAHIIAAQMGAAIKVTAAPMIEKAGDLAAILTNLQSGDVLFIDEIHRLSPAIE EVLYSAMEDFRLDIIIGSGPAAQTIKIDIPHFTLIGATTRAGMISAPLRDRFGMQFRLQF YTHAELARIVQIASVKLGKESAADASAEIARRSRGTPRIALRLLRRIRDFAEVRDEGAIS HDRAREGLEALGVDEQGFDEMDIKYLEILFDAKHRALGLSTIAAALSEDEGTIEDVIEPY LLANGYIEKTAKGRIATDKAREALGRVLKTAERNLFEE >gi|257443718|gb|ACYG01000005.1| GENE 94 98343 - 99020 594 225 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458853|ref|ZP_05623976.1| ## NR: gi|257458853|ref|ZP_05623976.1| hypothetical protein CAMGR0001_2437 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2437 [Campylobacter gracilis RM3268] # 1 225 1 225 225 451 100.0 1e-125 MAKALKIIIAAALGLFFCVKVLPILAIVLYFKFFFVDNDAIELDKVPPMQNYEQNREKFL DLLAFAGRNFPKNLRVTIQSTYGDEYIWIDLDGNETKFYSNSIFRDNAPGIGEGLKLIGW DKKTFGELKSKLAAINARTIVLNRSGDNRVPWASITYSYMEHFADSYEFYAPDSPKLAKL HAKGCSKKFESDGVVFLDAIEISDYRVLCKSDDDNKSVLIKESDR >gi|257443718|gb|ACYG01000005.1| GENE 95 99436 - 100233 1329 265 aa, chain - ## HITS:1 COG:HP1058 KEGG:ns NR:ns ## COG: HP1058 COG0413 # Protein_GI_number: 15645672 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Helicobacter pylori 26695 # 1 263 8 269 270 270 50.0 3e-72 MSKITLSKLYEMKKSGEKIVMITAYDALFAKIFDDEVDMVLVGDSLNMSFGGHSETLGAS VEQMIYHARAVRRGLKRAYMVVDMPFCSCATPELALQNCAKVYESTGCDAVKIEGGAHMA DTVALLNRNGIAVMSHIGLKPQFSRFMGGYKVSGRGEEGAREVLSDARTLTEAGAVLLLV EGTIRSVANQVALGTDVPVIGIGAGAGIDGQVLVWSDMCGFFTEFRPKFVKRYLDGAELV KGAVREYAREVKEGGFPIEEFEYKQ >gi|257443718|gb|ACYG01000005.1| GENE 96 100923 - 101267 317 114 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1678 NR:ns ## KEGG: CCC13826_1678 # Name: not_defined # Def: putative aminotransferase # Organism: C.concisus # Pathway: not_defined # 4 108 3 108 112 109 52.0 5e-23 MSFIDEDYVNIVPQDLLERGIRLREELGFYEIAWKFDDVMEVLKITKSKDMVILGGDVYR LSGNKPIITGDGWYTNKGDDDAFEVAIEYITKYRARNGDDFAYCPVISPGQVPK >gi|257443718|gb|ACYG01000005.1| GENE 97 101464 - 101865 454 133 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1520 NR:ns ## KEGG: CHAB381_1520 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 14 119 6 111 115 89 50.0 4e-17 MREDERVNTALMAKIDILLNLINFAKDMSAIKSDLAKIGFNSESELVTITQNTIANILNR VIDKEISYDLLEEWANLIECREDIGYEDEILQEIIFELANPCLYGEIDERKICMILDEIK YGRSDSNDIRKKY >gi|257443718|gb|ACYG01000005.1| GENE 98 101843 - 102007 72 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILEKNIDMVSERAILLMALGSLQALEHKAITIDESKEFIFTLYLNALGKKQGR >gi|257443718|gb|ACYG01000005.1| GENE 99 101943 - 102176 213 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458858|ref|ZP_05623981.1| ## NR: gi|257458858|ref|ZP_05623981.1| hypothetical protein CAMGR0001_2444 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2444 [Campylobacter gracilis RM3268] # 1 77 1 77 77 128 100.0 1e-28 MKAKNLFSPYISTHLGKNKVDERIVDIIIECCELEDIFELIPTKYMQTLQTLQNRIIEIL KQYDEEIRERWVIVDEE >gi|257443718|gb|ACYG01000005.1| GENE 100 102719 - 103042 535 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458859|ref|ZP_05623982.1| ## NR: gi|257458859|ref|ZP_05623982.1| hypothetical protein CAMGR0001_2445 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2445 [Campylobacter gracilis RM3268] # 4 107 21 124 124 184 100.0 2e-45 MKKQVLTKVQDFNGNVFYVERKRIQIERVREYREIEKYATFDGNGYDRYNRRLGYILETR VYFSDFDMGWNSATIGWATATDKNGKEVRFVVEDDNLQNSITKFVEE >gi|257443718|gb|ACYG01000005.1| GENE 101 103043 - 103417 188 124 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNIVSGWQTRIFPRHCNSSDEKGRYYVRFWHYDMGRYCYVYDGDFVSWLDSESKRRIQR CVSTKNSEKYHICRNLPRDTSPLSNYDIDHFVILENGKTLAVPVVGDGAFEISDEEYHQE CWID >gi|257443718|gb|ACYG01000005.1| GENE 102 103417 - 103689 207 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLKEVSQLTGIPYQTLLGWERAGGYRRNLVRFLKSCDRATLENHFVEASSDMVVQNGDV VVVEKNGSFSIATYPADGKIISILQKFNKN >gi|257443718|gb|ACYG01000005.1| GENE 103 103898 - 104518 465 206 aa, chain - ## HITS:1 COG:no KEGG:HH1096 NR:ns ## KEGG: HH1096 # Name: not_defined # Def: hypothetical protein # Organism: H.hepaticus # Pathway: not_defined # 75 205 24 153 154 100 39.0 3e-20 MIFLILATICAFIILILFSTLNTEKNTKIGNYTITNYKRTKKQEQCNKYIQENKNLIKQD KQTDLYEIYKQIKIENITKQKMISKRKKGTEYELYIAKYFRNEGYKIYMNGLNNGKKDDG IDVICHKDKETILIQCKNWKYPIEQKDIRAFIGDCHVYINKNAAFLRNRKIRKIFITSNE ETKKAVELYVKENQAEVEYITIPMFD >gi|257443718|gb|ACYG01000005.1| GENE 104 104518 - 104772 249 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458863|ref|ZP_05623986.1| ## NR: gi|257458863|ref|ZP_05623986.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 84 1 84 84 98 100.0 1e-19 MTNAEIAKKLKIAEKTIYNWRKNRKELFEILELGIKIQESQKNIEYVNNTYKELINLYKK LNEKEQEYYITDIKARILKKEIDK >gi|257443718|gb|ACYG01000005.1| GENE 105 104935 - 105462 449 175 aa, chain + ## HITS:1 COG:no KEGG:JJD26997_0354 NR:ns ## KEGG: JJD26997_0354 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_doylei # Pathway: not_defined # 47 153 1 107 122 74 35.0 2e-12 MSRAEVRWEFHPSKWLNYSGRFVKITLPSALQGLIELSSIKYKGRVMDYITQDFKVSYEL TKAIAKSGAKGEMNGRAYSSSVKLTARNQYEEENSITNCVDLKEQELIVRILCKDDLTAG VLTTKFNQFFRKNGILKFNAGLPSFNNGAYTLTTDEDDAYWINFLNNITSSSPKK >gi|257443718|gb|ACYG01000005.1| GENE 106 105541 - 105780 282 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458865|ref|ZP_05623988.1| ## NR: gi|257458865|ref|ZP_05623988.1| hypothetical protein CAMGR0001_2451 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2451 [Campylobacter gracilis RM3268] # 1 79 1 79 79 114 100.0 2e-24 MKKLSFLKEKLCSAKAKLYLASCVGFSAMNASAAGIALDPATGAVSGDLDKTTFFGVAGA VLVLLGVMFGVKKGLALLR >gi|257443718|gb|ACYG01000005.1| GENE 107 106354 - 107718 938 454 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458868|ref|ZP_05623991.1| ## NR: gi|257458868|ref|ZP_05623991.1| hypothetical protein CAMGR0001_2454 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2454 [Campylobacter gracilis RM3268] # 1 442 1 442 454 818 100.0 0 MFNKFKFIPLILISLAAFSFAEIFPTASYDYRLRISAAGDMWLYYGTYMNAISKHCRLKQ IEKPTTEVPYFDKTSFKINSFYSDVAPQTISHGSSYLHDPYILYKYLGYDDLPCPGEPSK TCTWFKYDSYQVAQIPNGVPFDCVSCNAARGEYFDSTTGLCVNKCEDITNQNDRLDCMCK RAGKIGYTGDLSTMFIGGDGSTICSYRCKTTKDDPEARPNGDGTEFGVSYDIKDTDPNAN GVCFTDDIYAPNATPGPNPKPDDPGNNNGTKPGGDTPKPDNPNPDKPDKPNPDKPDQGGG GHPGGGSNPGNNNGTKPGNSDNNNGTKPGKDDNQGKFDPKDFDDGGLDKAREGLYDSIKN HLENGISKFDGVRDGIDQFINNVKGKGFSKVQSEIKRSCSIKKEIQLPDGKARELVVDYC DAVAPASEVSYYVFYVFFIVGIFLLLLKLFVVLI >gi|257443718|gb|ACYG01000005.1| GENE 108 107728 - 108156 290 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458869|ref|ZP_05623992.1| ## NR: gi|257458869|ref|ZP_05623992.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 142 1 142 142 216 100.0 4e-55 MPAFIVSALAWVFRKFSLGELAGFVLKKVVFSKLVLIEAAMFILMLIYFGALLAMAVFLF DQLGDIYGFIKNLTNPGTSTNEVTSVALSVLSTLGVFKAFWDVFNLYAPFLISLFLIIGA KMGMKLLEKLRKTINELTYYIT >gi|257443718|gb|ACYG01000005.1| GENE 109 108166 - 109272 709 368 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0191 NR:ns ## KEGG: CCC13826_0191 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 352 1 352 374 275 47.0 2e-72 MITYIVGNPGSGKTYYSVFKIYQLFIFKPKDTFLSKVIKPEKQKEYLYCYTNINGFKFDL DNKFIKFDYEKFYSDLEVLYLLYMDKVGDDVLNEKAKELNLHNVLIILDEAHNFLKAKED SILVWWLTYHRHLYQDIMLITQDLSLISNEYKRIAEHFVKAVDSSKRLFKNKFRYMLYGS YKMYQKDVMQKFHVPYLKEVFNLYHSGQNASQKSFVRKFLYVSLFLFITLSIYFYFFVKS FNSDESADSSAPAPDTQSNQPIETASGNSTKALFNASNPNPNEPPIGYIYQIYCFYDRCS IQNGTYDHFDQRYLNFIFLRSPPKFNVRSFKGKGITYFFVGFDKPVFDNLKKEELNEKSS FSSAIYSK >gi|257443718|gb|ACYG01000005.1| GENE 110 109232 - 110401 1128 389 aa, chain + ## HITS:1 COG:CPn0702 KEGG:ns NR:ns ## COG: CPn0702 COG1450 # Protein_GI_number: 15618612 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Chlamydophila pneumoniae CWL029 # 214 377 684 851 919 82 32.0 1e-15 MKKVLFLVLFILSSAFSEEIKLNLLDFANVASHNSKIDILISDEIDPNSFYFYTSKNSDV TIKHFRKAIESKGLKLILTDGFYYVFKKNKDYGDANGSISAERRLRYLTLANNSYDDADK IVSKMTDQNSSYIRSTNSVVFKASDDEYSDIIDFVQRSDKKLEQVNFKLTILETNTNDYK DIGSHLNSLGDVVTRSDLNYFINLITMPYSAETNVVTTKKRGFYGVLSLLQQNGVTTIKQ SPFLVAKSGAEVYFSSVENVPYLTNTSTYTQNGTATQNSYEYKDVGLKIKIRPVVLQNSN VDFSLDLVVEDLLDTQNTLTPRTSKKELKSNYSLKRGELLVLSGINKDVAYSKRNGVPLL KDIPILKYLFSIEQNYKSTSIITLTIEVN >gi|257443718|gb|ACYG01000005.1| GENE 111 110545 - 111420 428 291 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1212 NR:ns ## KEGG: CCC13826_1212 # Name: not_defined # Def: nucleoside diphosphate kinase (NDK; NDP kinase; nucleoside-2-P kinase) (EC:2.7.4.6) # Organism: C.concisus # Pathway: not_defined # 1 291 6 296 446 305 51.0 2e-81 MFGLNEADFAAVKLKIDRQRKFLQDYKFTNSFGEEKSLLSVSKSANFSSTYYAEVANRTN TIHMLSVKHELAPVFLTITLNGCFRKALVGNFATFTTKDIRSLPIEQKQKLNEGVPFSIR DLANVLNYNFHKFTMRFRRIYKGEVFQYIRTFEPHKKDGVPHIHALIYAPRHTIPYLLKI YKDVFYAPQNLRNERLTASQITNGEINGFQTSINNATGYVMKYITKTFINFNETDDINEV QAWFIKHKIRRFLSSQNPIPLWVYRKINFIKSLRDLGNLNILKDFDNTLIE >gi|257443718|gb|ACYG01000005.1| GENE 112 111445 - 111897 468 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458873|ref|ZP_05623996.1| ## NR: gi|257458873|ref|ZP_05623996.1| bacteriophage replication gene A protein [Campylobacter gracilis RM3268] bacteriophage replication gene A protein [Campylobacter gracilis RM3268] # 1 150 1 150 150 285 100.0 5e-76 MSIPYTSEELIYEDGHLLYYVCGRLMHEYVKNINPAQSTGKIQSHEFKSIQKAYNSDIKP VSHNPYKIFRTAWKDMSDERLKLYWRDNQKEMTDDILSVQDYAMLENEMIERGFLQRYKN HIRYFTQHALEDIRELEFKYSNNGVMPYPF >gi|257443718|gb|ACYG01000005.1| GENE 113 111909 - 112784 448 291 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1213 NR:ns ## KEGG: CCC13826_1213 # Name: not_defined # Def: ferredoxin, 4Fe-4S # Organism: C.concisus # Pathway: not_defined # 3 287 1 285 288 399 72.0 1e-110 MLLNELFNNYIEFYELILRKHTLESDISMYKKHIASSLGEKDVSDISFLDIQRLCNGLIK ADYKIKTVKNILAKLHVIFKFAQKLELIAKNPCDFVELPKFDNKRYFDYPLSVQRQFIKA ICENEADSADIFFFLLHGRRKNEVLSLCWSDVNLKTKTYVIPFQINKAKRDMVYSMSDEL YKRLLKRYIAAKQNNQLNGYVFVNPATGSKFVDLRRSWNSLLKRNNLPKIRLHDIRHLIG TYCINYLKLPIEQVSFTLGHTNIITTQKYITANIKQSKNTIENLIISALEK >gi|257443718|gb|ACYG01000005.1| GENE 114 113292 - 113738 486 148 aa, chain - ## HITS:1 COG:Cj1343c KEGG:ns NR:ns ## COG: Cj1343c COG2165 # Protein_GI_number: 15792666 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Campylobacter jejuni # 1 54 1 54 171 73 59.0 1e-13 MKKGFTMIELIFVIVILGILAAVAIPRLAATRDDAEVSKAATNIQTLITDLGSYYTSQGS FAGEGEGATASMTNVPNPIKVKKETCLEVTGYDNAKGEASMTITKTGALCQRVWGMPGVS QVEAAIKSEAGNKTKNTYKFGGKGVQYE >gi|257443718|gb|ACYG01000005.1| GENE 115 114012 - 115262 1260 416 aa, chain - ## HITS:1 COG:Cj0947c KEGG:ns NR:ns ## COG: Cj0947c COG0388 # Protein_GI_number: 15792276 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Campylobacter jejuni # 4 220 1 217 290 336 66.0 6e-92 MKILKVGLISHKFEGTKARTITHSIELIARAAAKGAQLIVLQELHQTHYFCQRENTENFD YAQDFDRDLRLWSEVAKRFGVVLVSSLFERRAAGLYHNTAVVFERDGTIAGKYRKMHIPD DPQFYEKFYFTPGDLGFEPIDTSVGRLGVLVCWDQWYPEAARAMALRGAELLIYPTAIGW FDGDGEDEKARQLEAWVAVQRGHAVANSLPVIAVNRVGFESASLSEVSPDEILSGRNKIS PASGGFLRASDGGAARDKISTVRDEILRIQGGRDGVAHAVDTGGAGGMSLAASGRGAQGE ILCASNLDCGSLTCGEAAQKSLKISIDVKFNGETFEVLPSKQRVDGLGSEDGIRFWGNSF VFGAQGEQLFRANSTDEVCEVVTIDMQRCENVRRWWPFLRDRRVEEYGILTKRYGL >gi|257443718|gb|ACYG01000005.1| GENE 116 115283 - 116275 1033 330 aa, chain - ## HITS:1 COG:Cj0949c KEGG:ns NR:ns ## COG: Cj0949c COG2957 # Protein_GI_number: 15792278 # Func_class: E Amino acid transport and metabolism # Function: Peptidylarginine deiminase and related enzymes # Organism: Campylobacter jejuni # 1 329 2 322 325 368 52.0 1e-102 MRAFAEWEEQEALLVSLPHADTDWAPYLGEIRAAYRDFIAAAARFEPVVAIAPNREDFEQ ICGGLANASFAKIDTDDTWIRDYGAIDVEEGGKITGLNFRFNAWGGKFASAKDDALNSKL YAANARPLRDVDLILEGGSVDFDGAGTMLTTSACLLNENRNSLSKAELDARLREIFGLKN IIWLGRGFIKGDDTDSHVDTLARFLSPHVVAISSCDDPSDLHYAELGAMKDEISSLGYDV IELPIPRAIFYQGRRLPATYANSVFLNGALIVPTYADPADPHDPNRAADELALSRLRAAC ADREVVGVNARVFIRQNGSLHCSCMNKFRL >gi|257443718|gb|ACYG01000005.1| GENE 117 116795 - 117418 342 207 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458879|ref|ZP_05624002.1| ## NR: gi|257458879|ref|ZP_05624002.1| hypothetical protein CAMGR0001_2469 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2469 [Campylobacter gracilis RM3268] # 1 207 1 207 207 414 100.0 1e-114 MKRVFLAFALWLGLCGAAFAMQDTEPSEAQGQNSTGVKILSDGFYKMSAEEYGKAKVSCD ASHYYIGCDKIYSPRISQFIKECDFGNGKYSTCEKLLETLNTKCFEKNGRENFEACDLAG EILIKTSRIPLGLERLVRGCEVGQIINSCFLCALTYLHYSFDIDEVIKYATMTRDLAHDK EHFNKIIKKLQDCKADKECNPAKLEFQ >gi|257443718|gb|ACYG01000005.1| GENE 118 117578 - 117820 208 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458880|ref|ZP_05624003.1| ## NR: gi|257458880|ref|ZP_05624003.1| hypothetical protein CAMGR0001_2470 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2470 [Campylobacter gracilis RM3268] # 1 80 8 87 87 149 100.0 9e-35 MQRNKIDLVRWIFSLRHILRSNTPFNSNEQVELKFKEPKSKHLIYNFFELIIHYAIIAPF LAIYAGIFLFCAGLAIKILS Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:39:55 2011 Seq name: gi|257443714|gb|ACYG01000006.1| Campylobacter gracilis RM3268 contig00001, whole genome shotgun sequence Length of sequence - 1651 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 849 1025 ## Selsp_0352 outer membrane autotransporter barrel domain protein + Term 916 - 949 5.2 - Term 1220 - 1284 3.1 2 2 Tu 1 . - CDS 1300 - 1650 367 ## COG2011 ABC-type metal ion transport system, permease component Predicted protein(s) >gi|257443714|gb|ACYG01000006.1| GENE 1 1 - 849 1025 282 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0352 NR:ns ## KEGG: Selsp_0352 # Name: not_defined # Def: outer membrane autotransporter barrel domain protein # Organism: S.sputigena # Pathway: not_defined # 23 271 1992 2233 2244 143 36.0 6e-33 TNYLDKLIPDGHLELFPFAISEAYDLRYETGSHVNSKGYGVAAGLASLTENFAGDILSGV FVEYGRANYDSYLDNGLHADGDSEYIGGGLMLKQNFTSGTYLDASFHVGKISSDYNSNDW TYAIAPGVLAHNEKFDISSTYMATHIGIGQIFDLSQRNKLDVYTKWLYAYTDDADATISS GERYHFDSITSNRVRAGLRDTINLKDEHNLYFGGAYEYEFSGDAKASTMGLDAPKPSLKG STGVFEAGYKYESKNLIFNLGGKGYVGKTRGGAINAGFEVMF >gi|257443714|gb|ACYG01000006.1| GENE 2 1300 - 1650 367 116 aa, chain - ## HITS:1 COG:Cj0773c KEGG:ns NR:ns ## COG: Cj0773c COG2011 # Protein_GI_number: 15792111 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Campylobacter jejuni # 1 115 139 253 303 108 64.0 2e-24 APFIARLIESALLEVDGGVIEAAKSFGASKTQIIFRVMFVEALPSIIGAITLTLIVIIGF TAMAGTVGGGGLGDVAIRYGFQRFRPDIMAYTVVILIVLVQIIQSIGNLLYKITKK Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:40:07 2011 Seq name: gi|257443683|gb|ACYG01000007.1| Campylobacter gracilis RM3268 contig00016, whole genome shotgun sequence Length of sequence - 25419 bp Number of predicted genes - 22, with homology - 21 Number of transcription units - 9, operones - 4 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 222 - 281 2.3 1 1 Tu 1 . + CDS 355 - 591 75 ## + Term 771 - 811 7.2 - Term 759 - 799 3.4 2 2 Tu 1 . - CDS 908 - 2482 1772 ## CCV52592_1613 alpha/beta fold family hydrolase - Prom 2542 - 2601 6.7 - Term 2568 - 2615 -0.6 3 3 Op 1 . - CDS 2715 - 3209 457 ## COG0526 Thiol-disulfide isomerase and thioredoxins 4 3 Op 2 . - CDS 3206 - 3655 144 ## gi|257458893|ref|ZP_05624014.1| hypothetical protein CAMGR0001_1827 5 3 Op 3 36/0.000 - CDS 3671 - 4573 1096 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 6 3 Op 4 10/0.000 - CDS 4575 - 5708 1344 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 7 3 Op 5 4/0.000 - CDS 5695 - 6939 1485 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 8 3 Op 6 3/0.000 - CDS 6939 - 8357 1368 ## COG4393 Predicted membrane protein - Prom 8409 - 8468 6.2 - Term 8728 - 8778 8.4 9 4 Op 1 5/0.000 - CDS 8784 - 9305 1010 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport 10 4 Op 2 . - CDS 9320 - 11251 1975 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 11296 - 11355 8.3 - Term 11426 - 11463 7.1 11 5 Op 1 16/0.000 - CDS 11471 - 12574 1095 ## COG2857 Cytochrome c1 12 5 Op 2 28/0.000 - CDS 12577 - 13836 1356 ## COG1290 Cytochrome b subunit of the bc complex 13 5 Op 3 . - CDS 13846 - 14352 618 ## COG0723 Rieske Fe-S protein - Prom 14382 - 14441 7.4 - Term 14995 - 15038 -0.3 14 6 Tu 1 . - CDS 15082 - 18516 3450 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component - Prom 18550 - 18609 4.9 15 7 Tu 1 . - CDS 18822 - 19316 670 ## COG3045 Uncharacterized protein conserved in bacteria - Prom 19350 - 19409 5.8 + Prom 19307 - 19366 10.2 16 8 Op 1 . + CDS 19415 - 20785 1708 ## COG1109 Phosphomannomutase 17 8 Op 2 . + CDS 20782 - 21027 392 ## CFF8240_1581 hypothetical protein 18 8 Op 3 . + CDS 21020 - 22033 998 ## COG0787 Alanine racemase 19 8 Op 4 . + CDS 22030 - 22743 609 ## COG1704 Uncharacterized conserved protein 20 8 Op 5 . + CDS 22759 - 23352 804 ## gi|257458912|ref|ZP_05624033.1| hypothetical protein CAMGR0001_1846 21 8 Op 6 . + CDS 23349 - 24146 761 ## COG1512 Beta-propeller domains of methanol dehydrogenase type + Term 24221 - 24264 -0.4 - Term 24000 - 24026 -0.7 22 9 Tu 1 . - CDS 24225 - 24407 174 ## gi|257458914|ref|ZP_05624035.1| thioredoxin family protein - Prom 24467 - 24526 6.5 Predicted protein(s) >gi|257443683|gb|ACYG01000007.1| GENE 1 355 - 591 75 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSKSGFGLAGNREMCAFKFSLLTVLAWVFLHSFWRILIVRVSNARSCTIPACFNTCDRL AHKRREILSHTSVFKFKI >gi|257443683|gb|ACYG01000007.1| GENE 2 908 - 2482 1772 524 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1613 NR:ns ## KEGG: CCV52592_1613 # Name: not_defined # Def: alpha/beta fold family hydrolase # Organism: C.curvus # Pathway: not_defined # 22 522 7 483 484 522 59.0 1e-146 MSKKSLALGAAAILCGALSLNAEVAATQDAQASLKFNAANFTQESVIVGGKKIKFRAYKN IIYVAKPVSAHYQSMNIFIPQQYFDGGKSGKFDAASAPIFLPNGVGGYMPGEAGEVKIDE SGKPNAIATALSRGYVVAAPAARGRTLKGANGDYIGKAPAAIVDLKAAVRYLKFNDAAMP GDANKIVSNGTSAGGALSALLGTSGDEAAYEPYLQELGAAKASDKIYAASAYCPIANLKH ADAAYEWMFGAQSEYEKMDFSGLDAAGFNERDENSSGAEKNSKKGADQSAAKPARKMLSG KLSAAQIKISDELKAQFPAYLNSLSLKDGGGRALSLDKNGDGSFKDYINGLISASFANFT AKNPRAKAPLYLAAKIKDDASQSHMLFWGYATAKPRAKTPPAFDGFALENPENELFGGAK FNAAHFTDFGAMNDPAKGVLIADARIVEMMDAMSFVHSGNGAKFYRIRHGASDRDTALAI PAILALSLQNAGKNVDFAVPWGQGHGGDYDLDELFNWIDEIVAR >gi|257443683|gb|ACYG01000007.1| GENE 3 2715 - 3209 457 164 aa, chain - ## HITS:1 COG:Cj1665 KEGG:ns NR:ns ## COG: Cj1665 COG0526 # Protein_GI_number: 15792969 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Campylobacter jejuni # 11 161 12 163 167 77 33.0 7e-15 MIKFLNLKVTAAVLALLLAGCDGWKHHLSSDGTSLASKFDPSERTLKIEGNDKPFVLFFY TSGCGACKAQVPALNELQANGDALIIGILGDGKGLEADAAIAREKGIKFPSVSGANSVKY FETIVGGIFGTPTSVIYDKNGKAVKKLIGLYPKSAFETQLKLMN >gi|257443683|gb|ACYG01000007.1| GENE 4 3206 - 3655 144 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458893|ref|ZP_05624014.1| ## NR: gi|257458893|ref|ZP_05624014.1| hypothetical protein CAMGR0001_1827 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1827 [Campylobacter gracilis RM3268] # 1 149 2 150 150 252 100.0 6e-66 MKNKATLKFKNFTARSRFFWVRTKLARAGEILCCACPAEAVCLERSNAVAKPSGVGKNLK SQNFKNRNAASTNCEAGRYIDFSADCYTDRDINFNAYRDINSSADRGMCHGINSNTDRDI NSGRDRAVNFKISNANLKADLARPKASFR >gi|257443683|gb|ACYG01000007.1| GENE 5 3671 - 4573 1096 300 aa, chain - ## HITS:1 COG:Cj1663 KEGG:ns NR:ns ## COG: Cj1663 COG1136 # Protein_GI_number: 15792967 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Campylobacter jejuni # 2 213 5 216 217 285 66.0 7e-77 MEILKFEGICKYFGEVKALDNISFDVLSGEWVSIMGPSGSGKSTLVNILSLMDTPTAGRY ILGGADASALNDEQILEFRRKKIGLVFQQFHLIPYLTAVENVMLNQYYHSCVDEGSAKAA LEKVGLGHRITHRPSELSGGEQQRVCIARALINDPDIIIADEPTGNLDEANERVVLQLFQ TLRSEGKTLLLVTHNEELGKFADKVVRLRHGKLDRIELLDQSTMKHNLGSQDKISDRNPN ESASQSSSAENLKAKNGDKNSSTNEKNSASQNLGGEDQSAENSNGENQGAKNSDAQNSGA >gi|257443683|gb|ACYG01000007.1| GENE 6 4575 - 5708 1344 377 aa, chain - ## HITS:1 COG:Cj1662 KEGG:ns NR:ns ## COG: Cj1662 COG0577 # Protein_GI_number: 15792966 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Campylobacter jejuni # 8 376 5 370 372 238 40.0 2e-62 MVGNNGAFFRGAIFKSIINSGIRSFVIFVAIMLGSAVCAAFVNIYADIDKKVASELNSYG ANLIVSPANLENSHMDEAALDAKFAKIPALKSANKYLFGSANLGVNSGIIMGVNFSSLRD TMPFLDLKEGSFIGVDFDDKNALIGQDLAKLLGAKLGDSIEITPIGSNETSKVKIKGIVY DGQKEDGMLLISLPLAQKILNQPAQVNYAEAIVSGDFKQLSEISKSLSDAQMSFAPIGKV SKTQGIILNKIKLLMLLIGITILLITSVCINTSLSSILLSRIKEFALIRAIGASKQNLLH LILSEILTVCVAGSLAGVFVGYLLAILLGHLIFSSSVDFRLISLFAAVALSLIFALAASY YPIKKALNPNLANLLRE >gi|257443683|gb|ACYG01000007.1| GENE 7 5695 - 6939 1485 414 aa, chain - ## HITS:1 COG:Cj1661 KEGG:ns NR:ns ## COG: Cj1661 COG0577 # Protein_GI_number: 15792965 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Campylobacter jejuni # 1 413 2 430 430 382 48.0 1e-106 MFLRIIKSSILNSRDSKILAFLTIFLSVSLIACMLNITLKIGDQVAKELRSYGSNIVVLP RSQSLSIEIGGREYSPLKNDDFLKESDLHKIKEIFWRNNITAFAPFLTTRTGDYDVVGTY FEKDVGVSDEPDFRSGVRSLYPFWSVEGQWVKDGAENEVLAGDGLGLKIGDTVKLGDYEV KVVGILHGAEDEAKKLIANLSLVQKLTHKEGLIAKAEVSAMTIPEDDLSVKARRSLDNLD ATEYDTWYCSAYVSSIAYQITEEYPNASAKAVLSVSEAQSGITKKIQNLMGVVSILSLLI SSICITSLLSSEIYKRKKEIGLLKALGASNFMIYIQFAAEIFVICIASSLVGAVVGYALS WAIAYQIFGSFIGVSLMVFPLSIVFGLLICIIGSILPLRGVIKLLPAEVLYGRK >gi|257443683|gb|ACYG01000007.1| GENE 8 6939 - 8357 1368 472 aa, chain - ## HITS:1 COG:Cj1660_1 KEGG:ns NR:ns ## COG: Cj1660_1 COG4393 # Protein_GI_number: 15792964 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 1 414 1 402 404 192 35.0 8e-49 MTIFFYHVSLALFPLAFLSAYLGGRRFISVSFLPALLGATFGVLCFSAFARSASTDTGKI IFDALALLAMLALLLAFKLKRFYLTAAVIFALGCAYGFEYRFIGMNFKIFSGELLDSFSL TNLFMAVLGALALILFYFIYRSALARASRGARLASFVIVWAFAFIAKIGFLGLDLRQADA PKALAAKGFEGLSNAIGSSEFLSVIAKIIHYNNSYLTLALCLIAALIALLTAFRAPSRVP REAGIIKFREVKAGRFAIFRDFSLILSLGILISFLGLYYILVASKPPTIDEPKIIEPQGA EFVIDANIVKDGKLHRFAYVTDDGHKVRFFILNRFTDKFAPVAVFDACSICGDMGYIKKG DELICIACNVRIFLPSVGKLGGCNPIPLDYKLEGQNIVIALKTIEDGASYFSEIVDKKVI DPVSRKEILNTSKFSYLYYGRTYFFESEANANAFTAHPERYVDENGTLKELK >gi|257443683|gb|ACYG01000007.1| GENE 9 8784 - 9305 1010 173 aa, chain - ## HITS:1 COG:Cj1659 KEGG:ns NR:ns ## COG: Cj1659 COG3470 # Protein_GI_number: 15792963 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Campylobacter jejuni # 1 172 2 179 179 224 65.0 6e-59 MKKIFSGMLALSLASVIAMAGEHPIGEPIEQNGMEIAAVYLQPIDMEPKGIDLAPSKADI HLEADIHAIKGNANGFGEGEWIPYLKIAYVLKNLDTGKIQKGNFMPMVASDGPHYGANIK MVNGVGNYELTYNIENPSANGFGRHADKATGVGKWWEPFSVKYTFQYTGAPKE >gi|257443683|gb|ACYG01000007.1| GENE 10 9320 - 11251 1975 643 aa, chain - ## HITS:1 COG:Cj1658 KEGG:ns NR:ns ## COG: Cj1658 COG0672 # Protein_GI_number: 15792962 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Campylobacter jejuni # 23 621 25 672 696 398 39.0 1e-110 MKFFKFAVLALVFPLAMLFADTDYRAEAATIKEKFAQAIKLYVDGNNSEARKITQEAYFG HFENLEAGIRINLGQKKSYDMEKQFGDIRKAIKAEKPLNEIQAMIDNLNREIDEVLPAIE SGHRLVAEYQDGGDGSTSAPASGGNSAASSTTSPWMSVYTEFKTELDNAKAAFDKKDTAA LKAALNRAKFDIYRNERLEEAVRKYVSSQTDQSIQQIIGNLLREDSDTDKSKFDEAINAL DNLALKAVNDLPQESYSIAPQTALAQSDTSEDEGKDFTPIVQNIKDKMAKVLQLYESGKV DDAIDESGNIYFDEYEESGMENIVGAKNTQLKLDTEASFNKISALMRAGASKEQIVAAQN ILFDQLTQSLELTKKSSNWDLFLYAFIIILREGFEALIIVAAVIALLIKSGNSKHLNIVY SALGVAVVLSIATAYGLNYIFGSENAGQTREVMEGAVMLIAVVLLFYVGFWLLSNASSKK WSAYIQGQISNSLSSGDSKMLWWTVFLAVYREGAETVLFYLALLFDAKSPAATSMVAAGF VAGLAALIIVYIVIKKFSLKIAIKPFFIATSVIIFYMSVVFVGKGVMELVEGKVFVPTVI DGLPTITWIGFYPYVQSLVPQAVMIVLLIVGILILKNKQKNKS >gi|257443683|gb|ACYG01000007.1| GENE 11 11471 - 12574 1095 367 aa, chain - ## HITS:1 COG:Cj1184c KEGG:ns NR:ns ## COG: Cj1184c COG2857 # Protein_GI_number: 15792508 # Func_class: C Energy production and conversion # Function: Cytochrome c1 # Organism: Campylobacter jejuni # 1 367 1 374 374 323 47.0 2e-88 MKEIRTLILVLFCVGILYWFIEPYAHTKLSPHTDPVNYDFAAGDTALAAHNVAAAESALA AAEKGGDETMIKNSKKALVGAKEQQDKTVLFWDEINKIDLSKGDAVRGAETFTNAGCTAC HGVKSANIPAPMDAASASAAYGVNPPDLSSAGYLYTDQFLAALIKDPIMALKLDQKFGDE KPFPMPGFFGAGGDLNQEIADIVAYLKSLAPSEDKLIASEVAASGIKQGTELNEAQKKFL LSKAVFEDACLRCHDVKYDKLFASSDKASLAAYMGSTPPDLSMMIRSKGANYLHEFINDT QKKLPGTSMPRVGLNENAEAKVVEYLADVGDSKKAEREATTINIMIYFLILSVFAGLWKS KIWSKLH >gi|257443683|gb|ACYG01000007.1| GENE 12 12577 - 13836 1356 419 aa, chain - ## HITS:1 COG:Cj1185c KEGG:ns NR:ns ## COG: Cj1185c COG1290 # Protein_GI_number: 15792509 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Campylobacter jejuni # 1 417 1 412 416 538 70.0 1e-153 MAHIRKATGVWDWFDQRLAVTKFFKVMVSEYWIPKNISFLWAMGVILMTLFIVLFVSGLM LVMYYKPDVNLAFDSVNFTIMKEVEYGWLWRHIHAVSASVVFLILYIHTLVAIYYRSYKQ GREMIWVSGMLLFIIFSAEAFSGYMLPWGQMSYWAAMVITNLFGGIPVVGDAIVEWIRGD YAVSDPTLTRFFMLHVCLLPLVVVAVLAVHFYSLRFPHVNNLDGEEIDFELEGEKYLQGK TSESKVIPFWPGFLAKDFFYVSIFMIFFFYLVGFHFDFAMDPINFEPANSLKTPTHIYPE WYFLWEYEILRGFYFDVGPLKAADIGLIAFAFAGISLFFIPLFDRSSVVAPAYKNKAFFI WFWVLVIDMILLSLFGKLPADGAELGIENKYWGFALSIIYIGLLVVVLPLITIAERKRV >gi|257443683|gb|ACYG01000007.1| GENE 13 13846 - 14352 618 168 aa, chain - ## HITS:1 COG:Cj1186c KEGG:ns NR:ns ## COG: Cj1186c COG0723 # Protein_GI_number: 15792510 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Campylobacter jejuni # 6 168 5 167 167 226 70.0 1e-59 MSDLKQDRRGFIGLTFGAVAAVGGVFALVGMKKSWDPLPSVRAAGVTTVDLSPIKEGELY QTQWRKKPIFVLKKTADMPKNDARDVVVGDARYTLCIGLCTHLGCIPSYKPSTQQFICAC HGGIFDASGLNVFGPPPRPMDIPPFKIDGTKLVLGEEGPEYQALKQKA >gi|257443683|gb|ACYG01000007.1| GENE 14 15082 - 18516 3450 1144 aa, chain - ## HITS:1 COG:Cj1013c_2 KEGG:ns NR:ns ## COG: Cj1013c_2 COG0755 # Protein_GI_number: 15792340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Campylobacter jejuni # 862 1134 1 277 287 387 65.0 1e-107 MKTFFSMECASVMLLILALACAIATFVETAYGTEVAWAMVYSTAWFGALMVLLGINLTYN IYRYRMIKLRTLPALIFHASFLFMLVGAILTRYFGFEGNIHIREGGESSIVTTKDEVVQL LTLGSDGEFISADESKFLNGAGRMNFDLNLDVEGRIANLKFKELVEHGELKWVQDPTGQA PARVELLFSNNVGSQNVSLQSGESMDIGELSITFNAEPKSKNFIYIKSKDGKFYLNSSLD INATKMADMSTSPLKRNEDNPLGNLLLYSFDGINFAPVSLLSSAVEKFVPVDANLPGEPG VVATLSFAGQNREIYVPRDSHGASYKVGDKNFIVALAPKMLHLPFKIALRDFVMDRYPGT NSPSGYKSEITLKDGNTSFDYDIFMNHVLDYGGYRFFQSSYDTDERGTVLSVNKDPGKVP TYIGYFLLCVGMFFNFFNRGSRFFKLSRLISENTHLAQEKDVNSKNSASSLAPASPVESS ASKRIKKSRRGTKGAALALVGALALSLAALYPSTANAEQNSTTQNSTSQSSASNTAAENS ASQNPASVQDPASQNSAQNSAQNSAVENSKQGSASQESAAEQDSIPPHNFSTMGGELAVP KFDPKFSEDLASLVIQGFDGRMEPFDTVSRELLNKIYRADNYKAPNGEILNHNAAALSFM LNQSYWRRAPIIKVSEPELKKILGMDEKQSHASMMDFFEFKGGESYYKLDKMVEEINRKP LGNRGVLDKEIIKVNERVNVFYSAFMGDYFRIIPVKNAKNNEWLSPLYLGDTLDQNESAE VKKMMGIFVSSVVYAQESGDWSGAEKMLSYVKKYQSQNGANLMPSESAIKYEILFNKAKI FSRLFPIYTISGFLLLIFIFLRMMKPALRLGGAFKLVYIVNIVAFIAHTAGLALRGYVSG HAPWSNSYESLIYIAWALSLSGIFFSRKSAISLALTSIMAGITLMVAHLSDIDPQITNLQ PVLKSHWLTIHVSVITASYGFLGLCMLLGIFTLVMFLFDKKSPEIARNITEATHINEMSM ILGLCLLTVGNFLGGVWANESWGRYWGWDPKETWALITIFIYAVVVHFRFMPKLNNQFAF AVASMFAYFSVIMTYFGVNFYLSGMHSYASGERIPVPGWAYVMIASMVALAIAAYFRSGK SARL >gi|257443683|gb|ACYG01000007.1| GENE 15 18822 - 19316 670 164 aa, chain - ## HITS:1 COG:NMA1549 KEGG:ns NR:ns ## COG: NMA1549 COG3045 # Protein_GI_number: 15794442 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 16 146 18 150 186 135 51.0 4e-32 MKKFILAAILVAFACAGDYELVGSVNTSFRIFGKDDRIEVIAVKDPKVDGVTCYVSYAKK GGAKEIIGVEEDRSEASVSCVQTAPKIIIKEELKKEDIFEKRSSLIFKKTHVVRLYDAVQ GSLIYLVYSDKVIDGSPNNSISAIPCHQAVGDVCELAYTQGKKQ >gi|257443683|gb|ACYG01000007.1| GENE 16 19415 - 20785 1708 456 aa, chain + ## HITS:1 COG:Cj1407c KEGG:ns NR:ns ## COG: Cj1407c COG1109 # Protein_GI_number: 15792725 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Campylobacter jejuni # 1 453 7 457 462 486 52.0 1e-137 MIEDIFREYDIRGIVGEELNERSVKAIGFALGKHIANLGLERVSVGYDARLSADELFGYF VSGLNFAALRVYNIGLLPTPVGYFSVFTHKFDANVMITGSHNPKNYNGFKITIGTDSFFG ADLKRLGAQVRELMSSNFEIPTDTSTQRYDILSEYLAYFEKEFAALKGFAAPFIIDCANG AAGVTTTKIVERLELNAKILFPQPDGNFPNHHPDPSEEKNLADLKAAMKQDGVALGFGFD GDADRIAVLTPRRNIKGDELACLLALNMHRPRILGEVKCSQAMYDTIDKIGKSFMGKTGH SNIKKAMKELGIDLAAEVSGHIYFKERYFGFDDGVYAMMRVLELVAKGYDLDAELDKLPR VFSTDEIKFNTSEEAKFKIIEALKAQIHTGIAELPPIRDIIEIDGIRVRFDDGWALVRAS NTTPVIVTRFEASSPEFRDEMQRVFLGKLENLKDQR >gi|257443683|gb|ACYG01000007.1| GENE 17 20782 - 21027 392 81 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_1581 NR:ns ## KEGG: CFF8240_1581 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 1 81 6 86 86 77 51.0 1e-13 MNESEKQEVEKNIKELLAARAEFFKFLDERVPKIEDTDVFDFERAGAASLKEVYAKFYGY DYAARKLLPYLYRTYGLDFDV >gi|257443683|gb|ACYG01000007.1| GENE 18 21020 - 22033 998 337 aa, chain + ## HITS:1 COG:Cj0905c KEGG:ns NR:ns ## COG: Cj0905c COG0787 # Protein_GI_number: 15792235 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Campylobacter jejuni # 1 334 1 325 328 316 50.0 4e-86 MSEIILDRAAYAHNLAQIAAKVGGAERVFLVAKDNSYGHGCRLCCEEAAKLGFVRAVTRS ATEAAQIADLFDEILVLSHIPGGDEDERFCYAVNDLSYFARLKRGLKIYIAADTAMHRNG IAASELDEALRLCKQGGFKLCGFFTHFRASDELSGDFFAQRQNFIEFKRLARQKAAAAGF GNLKFHSSNSAAIERSAGFEDEYVRVGMAQFGYPQFDESLNLRPVLKLYADLISSRVLKK GERVGYGAKFEAPHDMRIGTYDLGYADGLFRYDGEGELALASGQKMLGKMSMDSFCAEFG GEQVCVLDDARAWAKHFGTIEYEILVKLNSNIPRRFQ >gi|257443683|gb|ACYG01000007.1| GENE 19 22030 - 22743 609 237 aa, chain + ## HITS:1 COG:BMEI0228 KEGG:ns NR:ns ## COG: BMEI0228 COG1704 # Protein_GI_number: 17986512 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 63 236 33 206 207 203 61.0 2e-52 MKELQGENNERIGYDDKGLSTRGENFGGREYPRQKGGLHILIKALIVLVIAAIAFAIFAV PVYNKLVSKDEEVKAAWSQVQNQYQRRADLIPNFVETVKGYASHEKDTLEGVINARAKAT AVNINAESLAQDPEAFAKFNGAQGELSSALSRLMLVVERYPDLKANQNFADLQNQLEGTE NRIAVARKDYIASVQEYNKLIRTFPTNIIARIVGLGGAKPSFSADSSSQKAPSVSFK >gi|257443683|gb|ACYG01000007.1| GENE 20 22759 - 23352 804 197 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458912|ref|ZP_05624033.1| ## NR: gi|257458912|ref|ZP_05624033.1| hypothetical protein CAMGR0001_1846 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1846 [Campylobacter gracilis RM3268] # 1 197 1 197 197 335 100.0 1e-90 MLSEQCKQEIHELITKAEAASGAQIVCVVAREASEDCEASYSAAAVTAFAIGIVMCFVPQ ISKSELLQIVALSFITIKALLAKCPALLTLITPKSRRLRLSGEFAMLKFYERYGSVKEAI MFCVCVRERCAHIICGERAAEFISKSEFERITTEFNPSTQGLEPAVLKAMDALCELAMRV PKDSENNEIEETLVELR >gi|257443683|gb|ACYG01000007.1| GENE 21 23349 - 24146 761 265 aa, chain + ## HITS:1 COG:BMEI0229 KEGG:ns NR:ns ## COG: BMEI0229 COG1512 # Protein_GI_number: 17986513 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Brucella melitensis # 34 195 28 192 253 132 39.0 9e-31 MRVAWRFAFALMALFVISVAAPSEYLAHPNGTAVIDEAGILRPAARESLNEILTTFDKNS TNQIMFISLKSLGGYSIEEIGVEQARALGIGQKERDNGVLLLVAPHEHKVRIEVGYGLEG VLTDMRAKRIINNKILPYFRQGDYESGVISGISAIISTIEGGDIKFDPLNANAQQDPSNK DFAIFMVLFAVLLFAILSRRVTRRRVSDEDIISSADIISEIARSSRMRGSPSGDFGGFKG SGGFSGGGFSGGGGSFGGGGASGSW >gi|257443683|gb|ACYG01000007.1| GENE 22 24225 - 24407 174 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458914|ref|ZP_05624035.1| ## NR: gi|257458914|ref|ZP_05624035.1| thioredoxin family protein [Campylobacter gracilis RM3268] thioredoxin family protein [Campylobacter gracilis RM3268] # 1 60 1 60 60 115 100.0 1e-24 MKFLNLKVAAAVFALLLVGCDEWKHHLSSDGTSLASKFDPSERTLKIEGNDKPLVLFFLY Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:40:56 2011 Seq name: gi|257443621|gb|ACYG01000008.1| Campylobacter gracilis RM3268 contig00017, whole genome shotgun sequence Length of sequence - 45914 bp Number of predicted genes - 53, with homology - 50 Number of transcription units - 22, operones - 13 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 11 - 757 664 ## COG0709 Selenophosphate synthase + Prom 639 - 698 4.4 2 2 Tu 1 . + CDS 726 - 1028 125 ## 3 3 Op 1 . - CDS 1030 - 1626 714 ## CHAB381_1779 hypothetical protein - Prom 1648 - 1707 3.0 - Term 1653 - 1697 2.4 4 3 Op 2 . - CDS 1711 - 2670 1148 ## COG2864 Cytochrome b subunit of formate dehydrogenase - Prom 2694 - 2753 9.5 5 4 Tu 1 . - CDS 2769 - 3923 1240 ## COG0019 Diaminopimelate decarboxylase - Prom 3944 - 4003 6.5 + Prom 3932 - 3991 7.0 6 5 Op 1 21/0.000 + CDS 4012 - 4233 390 ## COG1977 Molybdopterin converting factor, small subunit 7 5 Op 2 . + CDS 4249 - 4758 697 ## COG0314 Molybdopterin converting factor, large subunit 8 6 Tu 1 . + CDS 4840 - 6123 432 ## Nitsa_2040 hypothetical protein + Term 6206 - 6249 -0.6 9 7 Op 1 . - CDS 6145 - 7065 557 ## gi|257458925|ref|ZP_05624045.1| hypothetical protein CAMGR0001_1858 10 7 Op 2 . - CDS 7055 - 7789 507 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 11 7 Op 3 . - CDS 7798 - 8943 736 ## Despr_0343 FAD dependent oxidoreductase 12 7 Op 4 . - CDS 8963 - 9916 341 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 9947 - 10006 3.3 - Term 9971 - 10026 -0.8 13 8 Tu 1 . - CDS 10046 - 11848 1921 ## COG1401 GTPase subunit of restriction endonuclease - Prom 11871 - 11930 4.3 - Term 11926 - 11990 -0.7 14 9 Op 1 . - CDS 12003 - 12638 772 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase 15 9 Op 2 . - CDS 12626 - 13276 77 ## gi|257458931|ref|ZP_05624051.1| hypothetical protein CAMGR0001_1864 16 9 Op 3 . - CDS 13266 - 14288 1505 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 14483 - 14542 4.7 17 10 Op 1 . - CDS 14586 - 15230 655 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 15243 - 15269 -0.6 18 10 Op 2 . - CDS 15326 - 15490 191 ## CHAB381_0426 anaerobic ribonucleoside triphosphate reductase 19 10 Op 3 . - CDS 15530 - 17638 2296 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 17693 - 17752 8.0 + Prom 17574 - 17633 7.5 20 11 Op 1 . + CDS 17810 - 18442 605 ## gi|257458937|ref|ZP_05624057.1| putative membrane lipoprotein lipid attachment site 21 11 Op 2 . + CDS 18484 - 18705 341 ## PROTEIN SUPPORTED gi|148926462|ref|ZP_01810145.1| 30S ribosomal protein S21 + Term 18709 - 18763 15.1 + Prom 18884 - 18943 4.4 22 12 Op 1 . + CDS 18963 - 19556 516 ## gi|257458939|ref|ZP_05624059.1| hypothetical protein CAMGR0001_1872 23 12 Op 2 . + CDS 19633 - 20622 1148 ## TDE1187 hypothetical protein 24 12 Op 3 . + CDS 20691 - 20912 74 ## gi|257458941|ref|ZP_05624061.1| hypothetical protein CAMGR0001_1874 25 12 Op 4 . + CDS 20882 - 21847 455 ## gi|257458942|ref|ZP_05624062.1| hypothetical protein CAMGR0001_1875 + Term 21954 - 21993 -0.7 26 13 Tu 1 . - CDS 22422 - 22757 387 ## CCC13826_2292 CrcB protein - Prom 22871 - 22930 4.8 - Term 23103 - 23147 5.1 27 14 Tu 1 . - CDS 23156 - 23887 1064 ## COG0730 Predicted permeases - Prom 24137 - 24196 8.4 - Term 24695 - 24749 -0.8 28 15 Tu 1 . - CDS 24773 - 25504 948 ## COG3022 Uncharacterized protein conserved in bacteria - Prom 25660 - 25719 2.8 + Prom 25487 - 25546 7.7 29 16 Op 1 10/0.000 + CDS 25631 - 27343 1740 ## COG0147 Anthranilate/para-aminobenzoate synthases component I + Term 27368 - 27400 2.1 + Prom 27353 - 27412 2.9 30 16 Op 2 . + CDS 27642 - 29246 1733 ## COG0547 Anthranilate phosphoribosyltransferase 31 16 Op 3 . + CDS 29247 - 30368 1053 ## COG3392 Adenine-specific DNA methylase 32 16 Op 4 . + CDS 30352 - 32133 1084 ## CCC13826_0970 N-(5'phosphoribosyl)anthranilate isomerase (EC:5.3.1.24) 33 16 Op 5 . + CDS 32196 - 32384 230 ## gi|257458957|ref|ZP_05624077.1| hypothetical protein CAMGR0001_1890 + Prom 32407 - 32466 4.3 34 17 Op 1 . + CDS 32496 - 32678 92 ## gi|257458958|ref|ZP_05624078.1| conserved hypothetical protein 35 17 Op 2 . + CDS 32732 - 33061 293 ## gi|257458959|ref|ZP_05624079.1| conserved hypothetical protein 36 17 Op 3 . + CDS 33078 - 33986 508 ## CHAB381_0596 hypothetical protein - Term 34002 - 34036 -0.9 37 18 Tu 1 . - CDS 34286 - 35347 1316 ## CCV52592_0403 hypothetical protein - Prom 35387 - 35446 8.2 + Prom 35740 - 35799 5.5 38 19 Op 1 . + CDS 35826 - 37166 1263 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 39 19 Op 2 . + CDS 37226 - 37597 419 ## CCV52592_1110 TonB-dependent receptor domain-containing protein 40 19 Op 3 . + CDS 37648 - 37920 138 ## TEQUI_0508 hypothetical protein - Term 38002 - 38051 8.1 41 20 Op 1 . - CDS 38160 - 39296 1100 ## CHAB381_1276 hypothetical protein 42 20 Op 2 37/0.000 - CDS 39307 - 40053 383 ## PROTEIN SUPPORTED gi|149002101|ref|ZP_01827055.1| ribosomal protein L11 methyltransferase 43 20 Op 3 . - CDS 40046 - 41227 1396 ## COG0133 Tryptophan synthase beta chain - Prom 41350 - 41409 6.9 44 21 Op 1 . - CDS 41447 - 41848 404 ## gi|257458971|ref|ZP_05624091.1| hypothetical protein CAMGR0001_1904 45 21 Op 2 . - CDS 41850 - 42035 136 ## gi|257458972|ref|ZP_05624092.1| hypothetical protein CAMGR0001_1905 46 21 Op 3 . - CDS 42057 - 42443 404 ## gi|257458973|ref|ZP_05624093.1| putative phytanoyl-CoA dioxygenase 47 21 Op 4 . - CDS 42481 - 42870 351 ## gi|257458973|ref|ZP_05624093.1| putative phytanoyl-CoA dioxygenase 48 21 Op 5 . - CDS 42906 - 43292 441 ## gi|257458975|ref|ZP_05624095.1| putative phytanoyl-CoA dioxygenase 49 21 Op 6 . - CDS 43282 - 43650 290 ## 50 21 Op 7 . - CDS 43697 - 44011 332 ## - Prom 44136 - 44195 4.3 51 22 Op 1 . - CDS 44288 - 44701 452 ## gi|257458977|ref|ZP_05624097.1| hypothetical protein CAMGR0001_1910 52 22 Op 2 . - CDS 44779 - 45507 345 ## gi|257458978|ref|ZP_05624098.1| hypothetical protein CAMGR0001_1911 53 22 Op 3 . - CDS 45504 - 45731 62 ## HSM_1646 cytotoxic domain-containing protein - Prom 45841 - 45900 3.1 Predicted protein(s) >gi|257443621|gb|ACYG01000008.1| GENE 1 11 - 757 664 248 aa, chain - ## HITS:1 COG:Cj1504c KEGG:ns NR:ns ## COG: Cj1504c COG0709 # Protein_GI_number: 15792818 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Campylobacter jejuni # 1 247 60 307 308 236 48.0 2e-62 MGGEVINALNIVGFDDCHFSNEILREILRGGKDKIKECGGALVGGHTISTPEIYYGLSVT GRVNPRKFWSNNTAREGDLLILTKPLGTGIIATAIKAKFLKFEEFRDAIESMILLNFYAV RALAGLKIHAATDVTGFGLLGHALEMINDSVSFKIYPSKIPLLKSALKCLDEGLIPAGSY KNLKFIAPGVDSEPDIMLCDAQTSGGLLLAVAEKDAARALANLKNAGYTSSAIIGEVVAR AEHKIYLV >gi|257443621|gb|ACYG01000008.1| GENE 2 726 - 1028 125 100 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRAFITSPPIANTSLREFAAAICPKTNGSSTKGVIKSSVCTSARSSLMRNTLASSLLQV DESRFALGSIKFPRFSVRPAGSSLAAQPAAAINFVRLKSL >gi|257443621|gb|ACYG01000008.1| GENE 3 1030 - 1626 714 198 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1779 NR:ns ## KEGG: CHAB381_1779 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 198 1 199 199 217 57.0 2e-55 MQLDCRNLNCPEPLLRTKKALGELKIAESLEILVNDIAPRENIKRFLAKNGFEAQISQAG ADTLIKTVKTDELKDESIDDIYCDVAAPKRGKVIFLNEEQCGSGPIGKSLLAKFLGAALS LDEKPVKLICVNNAVLITTNRGHECFEAIKKLNEAGAEILSCGSCLEGYKLVDKLAIGEI SNAYEIMDVLSKYEVIKL >gi|257443621|gb|ACYG01000008.1| GENE 4 1711 - 2670 1148 319 aa, chain - ## HITS:1 COG:Cj1509c KEGG:ns NR:ns ## COG: Cj1509c COG2864 # Protein_GI_number: 15792823 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Campylobacter jejuni # 1 310 1 301 310 326 54.0 4e-89 MKRLFLALFACIYAQAEEKKYADIVQGNSDVWGNARLENIDSYGNGFGPIFLQFQGHLQS SGFFAWLALGAVLGVIIAFIGHYAIIGPKHFDHHAGKPIYAFNKFERLYHLVAAVAWAIL VPTGLIMMFGEEFGGGAFVRFCKNAHGLATIAFAIAVIPMLVTWFWRMLPRTYDIRWMMI VGGYLNKKKRTIPAGKFNAGQKAWFWVATLGGIVMIATGASMFFLDYDIPAMRSALGMSQ IEILRASAIIHNFLGAVCAVFLLVHIYMAVFAISGAIHSMIDGHKPEEEVYVLHHYWYRE LLDKGQIAKSQFEAKYPRL >gi|257443621|gb|ACYG01000008.1| GENE 5 2769 - 3923 1240 384 aa, chain - ## HITS:1 COG:Cj1515c KEGG:ns NR:ns ## COG: Cj1515c COG0019 # Protein_GI_number: 15792828 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Campylobacter jejuni # 1 384 1 382 382 442 57.0 1e-124 MKIDEISTPAYVCEEQKLVKNLEILRGVGERSGAKILCALKGFAFSFAMPYVDRYLWGAT CSGLHEAKFAAEFIKNGEIHTYSPAFKEDDLDEILKISNHVVFNSAAQWQKYRAKALAAG ASCGLRLNPQTSFAPKDAYNPCGSFSRLGMSLEALQRAILQDGEFLRGISGLHFHALCEE SAQSLERVLEVFEAKFGKYFRALKWLNFGGGHHITRAGYDVELLIDLIKKFREKYEVEIY LEPGEAVGWECGYLVASVLDIVENGAKIAILDASSEAHMPDTVLMPYRPTVRGESESGKF SYRFGGNTCLAGDVAGLESGQPEYKFDAPLNIGDRVIFEDQIHYTIVKNTTFNGIKLPDL VLADERGEVLMIKKFGYDEYARRN >gi|257443621|gb|ACYG01000008.1| GENE 6 4012 - 4233 390 73 aa, chain + ## HITS:1 COG:Cj1517 KEGG:ns NR:ns ## COG: Cj1517 COG1977 # Protein_GI_number: 15792830 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Campylobacter jejuni # 1 73 1 73 73 89 60.0 1e-18 MVEVEFLGPIGREPLCLNANSLQEVKAELQKDESLREWLANCAVAVNDKMIYDANFALKS GDRVSLLPPVCGG >gi|257443621|gb|ACYG01000008.1| GENE 7 4249 - 4758 697 169 aa, chain + ## HITS:1 COG:Cj1518 KEGG:ns NR:ns ## COG: Cj1518 COG0314 # Protein_GI_number: 15792831 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Campylobacter jejuni # 18 168 6 146 148 178 57.0 5e-45 MSEAKFNPEILSKIEPEIYEGSLDVNAILSRWYAKFKDANCGAFITFVGIVRDEGGICAL SFDIYEPILRTWFEAWQQKAAARGAFVLFAHANGGVPIHESSYVAGVVSPQRKVALALIN EFVEDFKAAAPIWKYDVKGGKIEGGKVVGGKRIYAADRSQRIKGAGLLG >gi|257443621|gb|ACYG01000008.1| GENE 8 4840 - 6123 432 427 aa, chain + ## HITS:1 COG:no KEGG:Nitsa_2040 NR:ns ## KEGG: Nitsa_2040 # Name: not_defined # Def: hypothetical protein # Organism: N.salsuginis # Pathway: not_defined # 3 413 6 432 1053 196 34.0 2e-48 MTNKFVIDLNFNKASSWFCVIIFFIFLNAFFNFLAVSYGESYPYNTFLFPPGDLHADLIK VALSYLRNKQIDYHEWPQLFQNYYINNEYGNLDKLQTGELTNFHLPPLTTIIALINAKIL QCTDPNFLLILFYAIAFCSIFILALFFGGNDKRRLFLFIMLLFSYPMLFTLTRGHIYAII TNFMTIFFFYSVFKKNNIIVPIVLMAIMFNMRPNSFFLSLLFFNYGFKKGLAGIIFSALI GIALFVVYLNIASYLYPDYNFKNFKRGVEIYYKLSVLGDGGDSFNNSLLGAFKFLKFENI EIINKIISVSLGLIALLSLYLFAKHKISSFDFIFLICSLYTLASSVFATYYMAIFYTFLL LLFKFDIRSKFTLPIVIASAFLLIPKNYIFKSYTSLEVLINPIFLLGAIVFILYKSILLD KYEAGAV >gi|257443621|gb|ACYG01000008.1| GENE 9 6145 - 7065 557 306 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458925|ref|ZP_05624045.1| ## NR: gi|257458925|ref|ZP_05624045.1| hypothetical protein CAMGR0001_1858 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1858 [Campylobacter gracilis RM3268] # 1 306 1 306 306 607 100.0 1e-172 MKTKKLILGTALWGWAISRAEAFYILDRFVEAGNSYVDCATNYPINKSKKDYGLALRWLS QWCSMHRNSILVLVKIGSVDNLGSSSINLSKKYIFSEYDDLLLNFGNSLACISVHWDNRK NSDLIKETVFALNELRSRDIDIGLSGIENPKDYYESMPELADCWIIQCKENLLTNNARLK YQKFFPKARYCAYGINIGGLKVARDDSVSAKIRGIEHPNRLRKVFYDALNNNNILSDIGF NTINDINMSFIYTNPAYDGIIIGPRNLEQLNSTLKTFHLLNSLSLDDRVDLIDFLRGLQE QIKRLD >gi|257443621|gb|ACYG01000008.1| GENE 10 7055 - 7789 507 244 aa, chain - ## HITS:1 COG:AF0581_1 KEGG:ns NR:ns ## COG: AF0581_1 COG0463 # Protein_GI_number: 11498189 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Archaeoglobus fulgidus # 6 219 56 265 280 134 34.0 1e-31 MFVPDIEITIPVLNEEKTLKNQILKIIEFLDKNCGRYGQIGLVISDNGSNDKTSHIAREF QENDPRIRYLRLEEKGVGRALKASWLSSKAGIIGYMDLDLSTDIKHLHQVFDALLSDKYD MVAGTRLAKESVVIGRSIIRNFTSRIFNKIVNLNFRGNFTDGMCGFKFLKRDILEALIEN GANNDGWFFSTELLVVADYKKFKILDLPIRWTDDPNSKVKIIKLTIEYLKAIFNLKKRLK QNED >gi|257443621|gb|ACYG01000008.1| GENE 11 7798 - 8943 736 381 aa, chain - ## HITS:1 COG:no KEGG:Despr_0343 NR:ns ## KEGG: Despr_0343 # Name: not_defined # Def: FAD dependent oxidoreductase # Organism: D.propionicus # Pathway: not_defined # 3 380 10 387 401 422 51.0 1e-116 MKKYDCIVIGGGFFGSTLGMFLKEYFDDVVVIEQEDDILKRASYVNQARVHMGYHYPRSL VTALRSMANFPKFIRDFAKAIKDDFDKYYAIARIGSKVSSKQFYEMYKKLGAPIKVAPSS IKAMFDDRLIEDVFRVKEFAFDAKILKEIIQEKYIETKCELRLNTTVYNIENGNDGYISV NLKEDESICAKFVFNCTYSGLNTILQRSNLPLLNLKHEITEMSLIEMPDELKNFSITVMD GPFFSIMPFPSKGLNTFSHVRYTPHGSWIDREEYHNGYDVLNSYHKKSNFKYMINDAKRY IPMLEDVIYKDSIFEVKTVLVKNEMNDGRPILFTKDYGIKNFSNIMGGKIDNIYDILDTI KEAKDFLGVKKRDFWNIFSNI >gi|257443621|gb|ACYG01000008.1| GENE 12 8963 - 9916 341 317 aa, chain - ## HITS:1 COG:SPy0510 KEGG:ns NR:ns ## COG: SPy0510 COG0463 # Protein_GI_number: 15674614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 24 301 23 307 308 75 23.0 1e-13 MKKDNFISIGIIFYDDSDVRKIIELHSLMESVYNYFEILILDFTSDAECKKRCDELIKSI TNTRIIKLSNTVDIEIAHTILIENCIGDFCCIADLEHEDIKDVIGILDKAEAFDIAMGKR EQKVRTIFESMMSKLFYKIVSIFTGAKLNSMHSDFFVINKKVMNHITKNEDKVKFLRLIQ LNNGFSKCDYSYMPIGKENYKRTFLQNVNFTIDIIVNYSNRLIRTATILSLFASTLNLFY ILYVLISYILNKNVASGWTSSNLYTSFTFFILFLVLAILGEHIRIIIQNQKNTPLYEISD EKSSLTLFSSKKNVDKE >gi|257443621|gb|ACYG01000008.1| GENE 13 10046 - 11848 1921 600 aa, chain - ## HITS:1 COG:mcrB KEGG:ns NR:ns ## COG: mcrB COG1401 # Protein_GI_number: 16132167 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Escherichia coli K12 # 325 545 199 416 465 73 28.0 1e-12 MQDFSKEKIESLVVSWKNHNKNQFWLKKQTAISKYLGEIKRCLASFDEAENEFLQTLYIN LSDGNLRSCKILSLGEKFAHAEYFFMDQFFDSNISAFYYDFAFKDRIVGKKELFPKNAVK SVDSVLSGEDKNIVSLYVFIENIVKNFNSYSQERTARDIFKQKLVNFYDELYRLLTAVDS ALAIDFFDVALHNQPFVLMEFLKSAINADNFYLIDSYLSDDGMLNLGLAEDGDFAQISRE KLYLLASIFAQCNDEFPTLIYRDETAQILSLLYDEKVEIFEEFYEVSSRFIAEFTPYPQD VVGAARIVYSSLFFEYVKNYKSEEVAKNTIFYGAIGTGKTRRLRSLITEKKLATKNFRYV CLHEGFEYCDFIDGFYGESFINGEFKALCKEALKDPKGEYYFLIDNAGAASLDKILGEAA VLLDRRYDENDELSLIRTKNSHIIDSFEEGEKARASVVLKDGRSYFAVPKNLYVLCTLNE YKCVSPSIAKAFRWIRCECDYGALEDYLRDREIVNASAVVAVCKALNKFIADEAKGLGAI GHGVFMGLARYQSGAQIMQEGLNGFFAEVLEPIFRCDYANKSIDFAISKELVEIKDIFKF >gi|257443621|gb|ACYG01000008.1| GENE 14 12003 - 12638 772 211 aa, chain - ## HITS:1 COG:Cj0228c KEGG:ns NR:ns ## COG: Cj0228c COG2518 # Protein_GI_number: 15791600 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Campylobacter jejuni # 1 210 1 208 209 220 52.0 1e-57 MVSLERLRCEKMANDIAEQVSLNPALFEAFCSVARSEFAPLGAHAFSLNAQPILASQWIS SPLTVARMTMALNVDPKVEKILEIGCGSGYQAAILSRMVHRVFAVERVERLVGEAKRHFA NLGISNISLRHDDGNAGWKNFAPFDRILLSACAERIDERLFAQLADGGILVAPMNRGGSQ KIVRFSKISPSEIKEEELGACEFVPLVQGRG >gi|257443621|gb|ACYG01000008.1| GENE 15 12626 - 13276 77 216 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458931|ref|ZP_05624051.1| ## NR: gi|257458931|ref|ZP_05624051.1| hypothetical protein CAMGR0001_1864 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1864 [Campylobacter gracilis RM3268] # 1 216 1 216 216 327 100.0 5e-88 MIFSGFCGLKFCSVLATRAYMASIFKSACARAARLWYAVEALAVKPTRARNAFSAPSRGA AGACAAEVLLVRLADSSHALLPELKRTQQILLGRAFAAGFGYSAQISSLQRGSKAQILSA EFGSAGEIFSARHESAAGALLSRHGHAMSAASAPSSAKFLKFSRAMYRNAAYAFSVQRER FGGIFKNFIDPEFKRSENFRGFKFNARPGGSALWSR >gi|257443621|gb|ACYG01000008.1| GENE 16 13266 - 14288 1505 340 aa, chain - ## HITS:1 COG:Cj0231c KEGG:ns NR:ns ## COG: Cj0231c COG0208 # Protein_GI_number: 15791603 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Campylobacter jejuni # 1 340 1 340 340 577 87.0 1e-165 MDRKKIYNPFSDETLTDRKVFGGNPQGILNFTKAKYQWALKLWDLMEANTWFPKEVDTTD DVRDYNFNLTSAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEA NHSKSYAVMVEAICENTDLIYEMEKHDDMLRRKNDYISSVYEELAGEVSDDKLLLAMVAN QILEGIYFYSGFTSIYALARAGKMLGSAQMIRFIQRDEITHLLLFQNMINSVRKERADLF NKRNVDKIYEMFETAGNLEIDWGKYITDNQIMGFTDDIIEEYIHYLVDQRLLAIGLEKRY DAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSLSFDDF >gi|257443621|gb|ACYG01000008.1| GENE 17 14586 - 15230 655 214 aa, chain - ## HITS:1 COG:MJ1227 KEGG:ns NR:ns ## COG: MJ1227 COG1180 # Protein_GI_number: 15669412 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Methanococcus jannaschii # 2 182 14 196 240 92 33.0 4e-19 MLDFADHIAAIAWFCGCNMRCNYCYNPQIVTSRGKISNEEFLRFLDARAGKLQGIVFSGG ECTCASDFIPLAHEVKQRGFLLKVDTNGSNPQKIEEALNLGLIDYIALDFKAPRQDFELI TKSSLYDKFLQTLRLLLRRNFKFEVRTTVHADFLNEAKIEQMAQILYSEGYRGVYYLQNF LPTGDNFGNLDAPLASFDPSKIHTDLKIELRNFD >gi|257443621|gb|ACYG01000008.1| GENE 18 15326 - 15490 191 54 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0426 NR:ns ## KEGG: CHAB381_0426 # Name: not_defined # Def: anaerobic ribonucleoside triphosphate reductase # Organism: C.hominis_BAA-381 # Pathway: Purine metabolism [PATH:cha00230]; Pyrimidine metabolism [PATH:cha00240]; Metabolic pathways [PATH:cha01100] # 6 47 852 893 893 65 66.0 7e-10 MEFPKELEAKRTKCVVYTRVMGYLRPVESFNIGKKGEHKERVFFEEKKDKKQIA >gi|257443621|gb|ACYG01000008.1| GENE 19 15530 - 17638 2296 702 aa, chain - ## HITS:1 COG:RSp0963 KEGG:ns NR:ns ## COG: RSp0963 COG1328 # Protein_GI_number: 17549184 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Ralstonia solanacearum # 3 693 5 656 683 768 53.0 0 MKKIIKRDGSFQEFQSYKIKDAIKKAYKSVGSEFDEKVFDNVMSAIVFKDKLSVEDIQDL IEKKLFEAGDFAVLKSFMIYRHTHKMQREHILGLEEDTTYINCTQTVNEYISKQDWRILA NSNTSYSNAGLINNTAGKVIANYWLDKIYSREEGAAHRNGDYHIHDLDCLTAYCAGWSLR VLLNEGFNGVRGRVESKAPKHFREALYQMANFLGILQSEWAGAQAFSSFDTYLAPYVFRD KLSDDEVKKAITSFVFNLNVPARWGQSPFTNVTIDMTCPDDLKTQIPTHNNEHLFKNLHD EELLAEAKRRGKDSLEALTYGDFEPEMNRIVIAFYEVLTTGDKCGQPFTFPIPTVNLTEE FDWDTPAADAVFENTAKVGSSYFQNFIGSQYITNEKGERVPNPKAYKPGAVRSMCCRLQL DLRELLKRGGGLFGSAEMTGSIGVVTINLARLGYLYKNNEEALYARLDELLELAKSTLEK KRKFVTEMFERGLYPYTKRYLPGFNNHFSTIGINGANEMIRNFSGNKEDITTEFGRKFAL KMVEYLREKIRSFQEQTGNLYNLEATPAEGTTYRFAKEDKKRYADIIQAGFDKNIYYTNS TQLPANFGSDPFEALAMQDELQSSYTGGTVLHLYMKERISSAQACKQLVKSVVQNYKLPY ITITPIFSVCHKHGYISGEHEYCPKCDEELLAEYKAKQSKGA >gi|257443621|gb|ACYG01000008.1| GENE 20 17810 - 18442 605 210 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458937|ref|ZP_05624057.1| ## NR: gi|257458937|ref|ZP_05624057.1| putative membrane lipoprotein lipid attachment site [Campylobacter gracilis RM3268] putative membrane lipoprotein lipid attachment site [Campylobacter gracilis RM3268] # 1 210 1 210 210 374 100.0 1e-102 MKNFKISFFAILLCALLAGCAALKGSKSTDNSALAGGIDHAGYSNAYLERIAGESIADLL SKRIVGKRGGRFSVVGIEPLDGTNAHGVDAEFLSKKIRISLLHSGKAVVTDAPSKDELVF SNDGVSRGYHAVESGSIYAPDYILVGKILPQSPAAANDGKAGSKKAKSLNSAAKNSTAQA SEGLLLELSMIDTRNNKSVWKYKKALQKQI >gi|257443621|gb|ACYG01000008.1| GENE 21 18484 - 18705 341 73 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148926462|ref|ZP_01810145.1| 30S ribosomal protein S21 [Campylobacter jejuni subsp. jejuni CG8486] # 1 73 2 74 74 135 90 3e-31 MRKVPGVKVYPNESFDEAYRRFKKQTDRNLVVTEVRARRFFEPMTEVRKKQKISARKKML KRLYTLRRYESRL >gi|257443621|gb|ACYG01000008.1| GENE 22 18963 - 19556 516 197 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458939|ref|ZP_05624059.1| ## NR: gi|257458939|ref|ZP_05624059.1| hypothetical protein CAMGR0001_1872 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1872 [Campylobacter gracilis RM3268] # 1 197 1 197 197 251 100.0 3e-65 MDLNDYLHTQDQQPSNPQEKEVALIKYTFIAACALKAIAELVLLLLGIYGGLGVLLSAAA FVLFIFSIYNISKLTVSRSLLRNVAIAFSAIFIGVLLFIFLAGGIIAQILLALGFIASFL FFYRFYQELADTSGVAIFSYCFIALVFAAIANAFLARFSLPATVLLSLAALALNAFAMFS VEGFSRSYYSYDLRGKR >gi|257443621|gb|ACYG01000008.1| GENE 23 19633 - 20622 1148 329 aa, chain + ## HITS:1 COG:no KEGG:TDE1187 NR:ns ## KEGG: TDE1187 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 4 290 5 283 305 296 50.0 7e-79 MVYFKHIFLALFCGALFCGVLYGENPNKISKQNFKSDFIWGVTIDDGWYEDAQDASSAKL QSIVRALQALPVKPTVRVVMSKEISPREYEPLFRRLSEVSYVMACPVDSYEMSSYKSVKS YEKRFADAFAALAPYVQIWEVGNEINGEGWLGDDANFIAAKMIAAFELIHKKGAKTALTA YYTPSGAQKTQMHEWLQKFVPQDMKDGLDYLFVSYYEDDNEGFAPDWSEIFTDLQSTFPA SKLGIGECGNTAADATQASKKAMMRRYYTMPRYVQNYMGGCFWWYFVQDCASGAGSDASN GKNRSARDKTEATDELLKSLSEAIGEAYR >gi|257443621|gb|ACYG01000008.1| GENE 24 20691 - 20912 74 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458941|ref|ZP_05624061.1| ## NR: gi|257458941|ref|ZP_05624061.1| hypothetical protein CAMGR0001_1874 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1874 [Campylobacter gracilis RM3268] # 1 73 1 73 73 125 100.0 9e-28 MKTFIKILKITALVVSVACVLFVLYIFVILNLLFSSDTPEGCDPSMPTSACDYIDEKFEK EIQICPQSPLCRT >gi|257443621|gb|ACYG01000008.1| GENE 25 20882 - 21847 455 321 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458942|ref|ZP_05624062.1| ## NR: gi|257458942|ref|ZP_05624062.1| hypothetical protein CAMGR0001_1875 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1875 [Campylobacter gracilis RM3268] # 1 321 1 321 321 649 100.0 0 MPPVAALPNLEKRPVFWLGEKKFAGGAKFYCLYIKDDFGVWLRYKDSDSDDFLLQKDMPE RYYGYDEIDRSPDLDWVKRELGYYSYGIYDISLFENEAKIFSQTAYKVVRKFIGFFNLHS IEGTSFAAPQGTEENLNAISELQTPLADFPQKQNYSALGWADQSEAEGYVGDEIAKKLTR NIFEVPGDGWRQTIRINSSAKDIKVICGDEICLALAFDESEFNRCDNDTPHTAIYMLNLK QKFNNFHTLTSSNFNYVKLGDKYTLDDVDSFKIVLSRFRYIKGYNKDREITDYEVILRNS EGEQINEICRNEIKRARSRLR >gi|257443621|gb|ACYG01000008.1| GENE 26 22422 - 22757 387 111 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_2292 NR:ns ## KEGG: CCC13826_2292 # Name: crcB # Def: CrcB protein # Organism: C.concisus # Pathway: not_defined # 20 109 28 117 117 73 52.0 3e-12 MARVGLNGAIARAMDRAGFWSAFPIATFCVNALGSLLIGFLLALNLTQSLRIFFVAGALG GFTTFSTFSYDTLQLLLAREFAIGVLNAVLSVCACMLFCYAGLLAGRALAG >gi|257443621|gb|ACYG01000008.1| GENE 27 23156 - 23887 1064 243 aa, chain - ## HITS:1 COG:Cj0343c KEGG:ns NR:ns ## COG: Cj0343c COG0730 # Protein_GI_number: 15791711 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 17 232 21 243 261 119 36.0 4e-27 MLELPFVGVVVGFISGFFGIGGGTVVMPVMMALGYDVKTAAGISVMQMFIVSLFGSYLNY RAGKLRLDSGIAVGLGGLCGASISGFIVKYSPEIVLEIGLLLTLAISFLKLFSTNVTSGG NADPHGAALFFIGFVIGAIALSMGVGGAVFLTPVLVGFLGVDIKRAVCMGLFFIVFGSFS ALLSLSYNGHVDYERGALLAVGGLLGVYFGTSQARRAKRETQKKWLLVLYVVLFALALKK VLQ >gi|257443621|gb|ACYG01000008.1| GENE 28 24773 - 25504 948 243 aa, chain - ## HITS:1 COG:Cj0984 KEGG:ns NR:ns ## COG: Cj0984 COG3022 # Protein_GI_number: 15792311 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 242 1 244 246 189 44.0 4e-48 MKILFSPSEMKSELGGGSRICERNFIFAELYEKRLQMLRAYAEFTEGASEAELCKLFGLK KWDAALRENIFEKGCAKALLRYTGTAYRALGYASLSPSAQEFAERNTIIFSNLFGPVLGG DALPNYKLKQGEKFGGIDVAKFYRDSFSAALDRYLADECVVDLRAGFYEKFYEMKHEYLS FSFIKGSKVLSHYAKAWRGKVLREIAQARACSEAEVLALRLGGASVLEIKQIGLKKEIVL EIS >gi|257443621|gb|ACYG01000008.1| GENE 29 25631 - 27343 1740 570 aa, chain + ## HITS:1 COG:Cj0345 KEGG:ns NR:ns ## COG: Cj0345 COG0147 # Protein_GI_number: 15791713 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Campylobacter jejuni # 1 421 1 376 416 313 44.0 6e-85 MLLEEPLFYYREILKTHPQSYLAEDDTQVIIGIDCDYFDGFKMSFEALKLKFDEVKSAKA GASEFKNASFAGLFGVLGYDIVRAFENIGSPKQALYDFPPFFYADAANYLHYDKISKIYD FYGKDAQIYENLRGLSSQASQQSSAKATSAPQSATRTDAAIKGGSKSQAVAKSEPKKKEL KFKILTDLGAEESHFSAMVEAAKEKIKSGDVFQVVLGEILKIGTNLGSLEFYERLKKNNP SPYMFHFPTPYGCVAGSSPELIMEIKKDEIFVAPIAGTRSRGANAEADAALERELLSDEK ELAEHRMLIDLARNDIGKFAAPASVRVQNAMRVVRYESVMHIVSEVYGSKPRGVSAFEVL STIFPAGTLSGSPKIRAMQIINELERYERGIYGGGIGFWRFSGDVMQAILIRSAIFVNRD AQDSCSDENSKRNSGLNLDAVCSEENSEATEFCDGENPETTEFCGAAAQKGSGEAQNLAR ASERDARLNLKACAGGGALNLENGSFSRAMRFEAAKFNAENFGCEGLSNLVFIGAGAGIV YDSSPKSEYAEICKKRKSPLKAIEELCEEV >gi|257443621|gb|ACYG01000008.1| GENE 30 27642 - 29246 1733 534 aa, chain + ## HITS:1 COG:Cj0346_2 KEGG:ns NR:ns ## COG: Cj0346_2 COG0547 # Protein_GI_number: 15791714 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Campylobacter jejuni # 206 529 3 326 332 358 55.0 2e-98 MIDNYDSFVFNIYQYILELTGEEVRYFRNDEITLQRVRELAPSHIILSPGPNHPKDSGVC LEILRADLDVPILGVCLGHQAIGYAAGAQIKQLEVPLHGKSSSIEIFNDGVLFSGLPRKF EVMRYHSLYVDEATLPSEFEILAKSENDGIIMAMKHRSKPVFGIQFHPESFFTQYGKKII ENFINYGKKIILKEKLVVNFAPFMLKLQKGFPLDSDDYAVICKALYEQDYDIVQLAGLLV LISEKSLYPSSLTALVRSILKYSITYDDPSPMFDIVGTGGDRLKTINISTTVAFIAASFG VRVAKHGNRAITSRSGSSDALDALGVPLLSDLAQIRVLLDRTGLAFFHAPFFHKITAEVK EVRNRLKIGTVFNIMGPLLNPNLSLSNQIVGNYLEEVNGLIAETLMILGRKHALVVHGMD GMDEISLCDETLIHEVKDGKILEYRVNPEQFGLARAFHGDIEGGDGEANAETLKQILKGE LSGPKFDIVVLNAMFALYCADVVSSPAEAKPLILEAIKSGKTWEFYENYVGARA >gi|257443621|gb|ACYG01000008.1| GENE 31 29247 - 30368 1053 373 aa, chain + ## HITS:1 COG:Cj0208 KEGG:ns NR:ns ## COG: Cj0208 COG3392 # Protein_GI_number: 15791595 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Campylobacter jejuni # 5 373 3 362 363 374 51.0 1e-103 MTSGEKREFLSEQLISYLGNKRSLLAPIERAICEIKAELGQGKISFADVFSGSGIVARLA KAHSNLVIANDLEGYSRAINSCYLSNFSDGLWRDLSELHAEILRNFTPKESFFSELYAPK DDENIKAGERAFYTRRNALILGGLCEQIGKIPQKFRDFFTAPLLSESSIHSNTGGVFKGF YKDKAGVGKFGGSGENALARIMGEISLRLPVLSNFACESAVFQEDAARFAQSASERFSQL DVAYFDPPYNQHPYGSNYFMLNLITDFINDGKCPNAAELSKVSGIPADWNRSAYNKKSSA AEEFFALLTKFPAKFLIISFNSEGFISKAEFLKNLTKIGSVRTIEIRYPTYRASRNLSAR ELYVTEFLYVVQK >gi|257443621|gb|ACYG01000008.1| GENE 32 30352 - 32133 1084 593 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0970 NR:ns ## KEGG: CCC13826_0970 # Name: trpF # Def: N-(5'phosphoribosyl)anthranilate isomerase (EC:5.3.1.24) # Organism: C.concisus # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cco00400]; Metabolic pathways [PATH:cco01100]; Biosynthesis of secondary metabolites [PATH:cco01110] # 206 331 27 150 204 82 37.0 6e-14 MSYRSKIKICGIKSAAEAHAVLACSSALCANLERADDAKNLPQSGSESSIKTPNFCGENS ERNFNSGAENATRNFNSDGQNFAQNFNQDDENFTYRAQNYANFTCEQNSDCDKNFGSDLR SQGDGSGVRVEFLGVIFVSSSKRRVSVETAREIARIAHENGAKCVGVFALSSKKHGAAAC ECKNFSSKTRDEKICEDKIYAGTSGGLKFYENEREDLSLNLNANCAVSASVKDLNSEILD TEALDEEQILKICSLCELDCAQIYGCISADFKVRLNAAGIEAWQVLSIGAEMPTLEGLSF DRILFDAKGASLGGNGVSFNWDLLRRVGLGYEGQYDATRDEKYCAGSTIQSIGDTKCDSA SGRCDTQNDAASDEKCYAAGTAQGSDRARSYLKHSAICSGYSEGNLKRDKNGDCNNSCAE HSENGNLKLQMVSNVCCASNSNEASERAHDIVRSGNTKQETSADRRVAKNDDECKFSACA TARLSGVRPTSEGVNDRGARDYEASAPNISNDGGEASKPGATKDDSADKRNTAFKGGAIS FILAGGIGAQNIREALALRPYAIDLNSRVEDARGIKDPQKISEILRILKNAQG >gi|257443621|gb|ACYG01000008.1| GENE 33 32196 - 32384 230 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458957|ref|ZP_05624077.1| ## NR: gi|257458957|ref|ZP_05624077.1| hypothetical protein CAMGR0001_1890 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1890 [Campylobacter gracilis RM3268] # 1 62 1 62 62 97 100.0 3e-19 MHNDEIARFGISKTRYDKNIKDFLQNKNCDKQNLVGSGLKFTSDGGRNSINASERNFTNA VE >gi|257443621|gb|ACYG01000008.1| GENE 34 32496 - 32678 92 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458958|ref|ZP_05624078.1| ## NR: gi|257458958|ref|ZP_05624078.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 60 37 96 96 118 100.0 2e-25 MIKFYSPFLYFLNFIDFGTRQDSPRSVKRWLELPGKFGTCYIKFKNSVIEYYSEKKRATL >gi|257443621|gb|ACYG01000008.1| GENE 35 32732 - 33061 293 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458959|ref|ZP_05624079.1| ## NR: gi|257458959|ref|ZP_05624079.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 109 1 109 109 180 100.0 4e-44 MTKKGKISTFFVAFAWIILLSLVVTFKNKISYGILIVPISLFLAFAPLIIFRFKKNLGFD IGNDSLIFMSNGNYIEASILTSKEYRELKAYFLLKTGKNLDKIPPQIFV >gi|257443621|gb|ACYG01000008.1| GENE 36 33078 - 33986 508 302 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0596 NR:ns ## KEGG: CHAB381_0596 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 69 299 18 247 250 191 46.0 3e-47 MNKKQRLEELNKILNERRQNLEQGSGRNFDAENSDSKNFKFEKLTNGFATNSNESISLTK FRQNPSCARDYNKEPLALKDRTNFYIVLATVCTLAIMIFMYSYEPNQTRYNQLFIVFPFF GLPIIMEYFTNFFNKKFVKFYNDRVTYCTNKMPEKTIFLDDLKDVKRAYFARDNEWLRRQ GAFYRFFLKFDPYATIIAFLLICILVLAIGVRKYIETGSSKVIFILILTFLFLFISKFIY FLVFKFQLRFIFYDNIIIRGKDKDIAFTIEAMDDYARIKEFFIKRKGIDLNKVQHHVWLG FN >gi|257443621|gb|ACYG01000008.1| GENE 37 34286 - 35347 1316 353 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0403 NR:ns ## KEGG: CCV52592_0403 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 351 1 351 356 466 76.0 1e-130 MNNVKWYIIAGAVLGVPGATLVHFGNPGNMGVCVACFLRDTTGALGFHRAAAVQYIRPEI IGLVFGGFLASVLWTREFAPVTGSSPFAKFFLGIFAMIGCLVFLGCPWRAFLRLGGGDLT ALAGLAGLICGVLIGFLLKKRGYEASKEARLSGAIGILPVLLGAALLAALVFGLKTGEGG ALFISAKGPGAQHAAIGISLAAGIIVGALMHRSKFCSVGAFGRIFRGDFSMFWGVLSVIA FASIANIAFGQYKLGFEGQPIAHNDFVWNFLGMVLAGLCFSLSEGCPGKHLVQAGTGNLS SGVFVIGMAAGAAIAHNFLLASSAKGITEFAPYAVAIGFVFALYVGIFQRRSA >gi|257443621|gb|ACYG01000008.1| GENE 38 35826 - 37166 1263 446 aa, chain + ## HITS:1 COG:ECs4380 KEGG:ns NR:ns ## COG: ECs4380 COG1629 # Protein_GI_number: 15833634 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 39 414 33 395 660 81 26.0 3e-15 MKKQILLVPLAIGAIGGVNAAENNATKSQDLGQIVVQATVSAVDNLKYAGSAGILTPKDM KAKTNVIDSIMQIPGVDGSMDMGRQIGRQFQIRGFGYQSDERVIIKQDGVRRSAGMYSNM ISSFRTDSDILKRVEVIKGASSVLHGSGAIGGIVNMQTKSASDYLSEGKSVGLMLGQRLE SNNMHSTRGAVYGKGEEIPIDVLLYGKRASYGNVKFADGGTHYAPDYDKSFNNEHIDTGF FKIGANLDDHRISFSAFDYDENLHTMWQTLWQNDADLFVSGNLSQRDYVFDWNFTPQSPL VDMSFKAYKSRAEYKRGYKDQQPTGTLDYANKDDRKGLEIKNISEFDTGFLNHSFAFGGD YEKRQEDATYILNGVLSDFASFPNEYNSYGLFAQDLIRLHDDLELTLGGRYDRFDRDIKG NRLNLKIRDFLRARRLPIRSSINLRF >gi|257443621|gb|ACYG01000008.1| GENE 39 37226 - 37597 419 123 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1110 NR:ns ## KEGG: CCV52592_1110 # Name: not_defined # Def: TonB-dependent receptor domain-containing protein # Organism: C.curvus # Pathway: not_defined # 1 115 483 598 716 100 42.0 2e-20 MNIHYYYIPNPDLKPETVKEYELGFSFKKEQIFTDDHFDMKFIYFNGKIEDMIDVKPLPH LGVPPGGFSQQYGQHQNIDQAKRHGFEISSNYQTEDFDFGASFERLRIYNKRRTKTSITT PKS >gi|257443621|gb|ACYG01000008.1| GENE 40 37648 - 37920 138 90 aa, chain + ## HITS:1 COG:no KEGG:TEQUI_0508 NR:ns ## KEGG: TEQUI_0508 # Name: not_defined # Def: hypothetical protein # Organism: T.equigenitalis # Pathway: not_defined # 1 90 624 712 712 85 47.0 6e-16 MSHYFKPHSKPASYFARGREYFYVDKSFTIANFRGSYKIKNGVIPVLDGADISFGVNNIF DRHYINANRTRETVVVGAGRNFYVDLEVRF >gi|257443621|gb|ACYG01000008.1| GENE 41 38160 - 39296 1100 378 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1276 NR:ns ## KEGG: CHAB381_1276 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 377 1 322 325 134 31.0 8e-30 MKKIFLILITNFCLGANLMQYDLFNHDDSVDIALAFDSAYKPDIVRRVDGQSMSLILKGL GGDEKFNEMRTNQKVLKSFTIAPKGKDIEINFPTGADLSVDALTQDGNLKLILRVKNPAF DQSKMSVKSEANETTQSGSSGVSVMPIIVALLLAAAAFVGVRKFLSHKPQKSIDETWRVF EDDASMEDADVDEASIDEILNDSSFKNQSGSKNANFTNYSDAQEFAKKDEVSALNSKNSN DSKNVDSADFLRGESADDKFYDEVARAERLETMEADENSESAENIRAADKISPLKVSPVE SGTMEFREGVKERSDTKEPKISAFKSILENELLSSDTARPSDVRVELVREIDENNAALVL SFAGKKHLVVLKSSNAID >gi|257443621|gb|ACYG01000008.1| GENE 42 39307 - 40053 383 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149002101|ref|ZP_01827055.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP14-BS69] # 1 245 9 252 258 152 37 4e-36 MDKIKAAFAGKKANIGYIVAGYPNPAHTKEFLSNLDESAIDLLEIGIPYSDPLADGPEIF KASFSAVQNGVNAEKVFEILKGVQTRKPLVFLVYYNVIFAYGAREFVSKAARYGISGLII PDLPYEENEEIFALCEELGIALIPLISVTSEHRAARVLSRARGFIYGVGAIGVTGSKQTP ISRLKNMVADLKKMSDLPMAIGFGIRTAGDVRATKEYADGAIIGTAIVNLCANYGGRELQ NKIAELFN >gi|257443621|gb|ACYG01000008.1| GENE 43 40046 - 41227 1396 393 aa, chain - ## HITS:1 COG:Cj0348 KEGG:ns NR:ns ## COG: Cj0348 COG0133 # Protein_GI_number: 15791716 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Campylobacter jejuni # 3 393 2 392 392 522 68.0 1e-148 MNKKAYFGSFGGQFVPETAMFALEELEDAYNTIAQTREFKDELGCLLREYAGRPTPLYHA ARLSEYYGHEIYLKREDLNHTGAHKINNALAQALLAKKMGKKKVIAETGAGQHGVATATA AALFGLECDVYMGETDAARQQLNAFRMQLLGANLIKIGTGLKTLKEATTAAIQAWVNEIE SVFYVIGSAVGPHPYPKMVRDFQSVIGAETRSQLASKGIKADYVLACVGGGSNAIGIFSA FVDDPAVQLIGVEAGGLGAQTPYHAATITNGRAGIIHGMKTIVLQDKFGMIEPVHSISAG LDYPGVGPEHAHLHEISRAKYEAVTDDECITALKLLCRLEGIIPAIESAHALAYLQKLCP QLKGRKTIVVNVSGRGDKDMDTVMNYKKGTIYG >gi|257443621|gb|ACYG01000008.1| GENE 44 41447 - 41848 404 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458971|ref|ZP_05624091.1| ## NR: gi|257458971|ref|ZP_05624091.1| hypothetical protein CAMGR0001_1904 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1904 [Campylobacter gracilis RM3268] # 1 133 1 133 133 246 100.0 3e-64 MKFLKRYKNIILLPFMLIISFFVFRMIYTEIISECAPIRLFSKNSLSNSGYVELKAKCIR KALENNDNYLIMQYFKRETSECLKIIDEPSKIPHNLIRVNSFEEWKKLRLTDTDNIICPI GNDKKSDIGNESK >gi|257443621|gb|ACYG01000008.1| GENE 45 41850 - 42035 136 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458972|ref|ZP_05624092.1| ## NR: gi|257458972|ref|ZP_05624092.1| hypothetical protein CAMGR0001_1905 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1905 [Campylobacter gracilis RM3268] # 1 61 1 61 61 109 100.0 7e-23 MKFILYIFNLLLCLSAWAYIDINGISDSKSSSIGAGIGISGSKTQKPRVFIRKIQKFLTR Q >gi|257443621|gb|ACYG01000008.1| GENE 46 42057 - 42443 404 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458973|ref|ZP_05624093.1| ## NR: gi|257458973|ref|ZP_05624093.1| putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] # 1 128 1 128 128 235 100.0 9e-61 MQINGKEIFKKGTLMCRLSRMASSEYQDKYIVHPTINKYEDPSEMVEFLYTECKNALLEQ FEFCFLPYERDALRELMELIDRYFKDQSLLEGVCEYLIYHNKSWVEVRELALKTLYTFGY DLEDFDYD >gi|257443621|gb|ACYG01000008.1| GENE 47 42481 - 42870 351 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458973|ref|ZP_05624093.1| ## NR: gi|257458973|ref|ZP_05624093.1| putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] # 1 127 1 126 128 161 74.0 1e-38 MQINGKEIFEKGGLMFNLSRMASLEYQDKYLVHATAKYYEDPSEMAELLCDECWRALDEK FRFCFLPYEREILKELAELIYKYFKDQSLLEGDTYDYLVYQNKSWVEVRELALKTLHIFG YDLEDFDLY >gi|257443621|gb|ACYG01000008.1| GENE 48 42906 - 43292 441 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458975|ref|ZP_05624095.1| ## NR: gi|257458975|ref|ZP_05624095.1| putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] # 15 128 1 114 114 204 100.0 2e-51 MQINGKEIFEKGGLMFYLSLMASLEYQDKYIVHPTAKYYESPSEMADILYTECENALLER FEFCFLPYERDALRELLELIDRYFKDQSLLEGIGEYLVYHNKSWIEVRELALKTLHIFGY DLGDFDYD >gi|257443621|gb|ACYG01000008.1| GENE 49 43282 - 43650 290 122 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRNLKWLARQETSTNVGDFAGLTGASFEEIFSRAPKDWKVMLQNDGNGIKFVEIVDGKK IDRVRIHAPENNPDLPSTANTNNGWVLRIHASRNKYFDDSGKILGRNTNETHIPIKGNPN AN >gi|257443621|gb|ACYG01000008.1| GENE 50 43697 - 44011 332 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNSFQQVFLTLVTLIAGALMYWALDYRFSQDAERKDPCYYAYFKVYDNNKSRFAYCINK ELRRAASQIKYYLKFLPEDINFTSEEEHVIEKGRMFSNSLNELR >gi|257443621|gb|ACYG01000008.1| GENE 51 44288 - 44701 452 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458977|ref|ZP_05624097.1| ## NR: gi|257458977|ref|ZP_05624097.1| hypothetical protein CAMGR0001_1910 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1910 [Campylobacter gracilis RM3268] # 1 137 1 137 137 246 100.0 4e-64 MATMYVGFWLSSDKYNFDFSDLILDEKTNEYKISYIKKYKIGDINKRRGEVINRCNWSCC TAKKECVFTSDALKDLYEILKTNFGDIKKRISELNLTVNIYVAVDTTEKDDIYSIDFSKE MIKMCAELNADVCVDGI >gi|257443621|gb|ACYG01000008.1| GENE 52 44779 - 45507 345 242 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458978|ref|ZP_05624098.1| ## NR: gi|257458978|ref|ZP_05624098.1| hypothetical protein CAMGR0001_1911 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1911 [Campylobacter gracilis RM3268] # 1 242 1 242 242 461 100.0 1e-128 MKSIKGIFRYLFPVRDGRELYWIKIPKGQSDRFGKEFIFEPESIAKSDAQKLGLKIDPKL LSDKRIKFHIRDMYYKTYYDITSFGIDESYADSRQIDLDLEDIKQIVKSDADDPYYVYGY SLNIEQMRSFGCLDMVKPGFSYFFGSSAGHERIIKAPNSSDKNIKGCYINVFDSDTEAFY VALLDVKLPFSEVAKIVRPLSVEANIHYSYSLSEEQIIKLGFPEILKENGGKIDAQISVE IV >gi|257443621|gb|ACYG01000008.1| GENE 53 45504 - 45731 62 75 aa, chain - ## HITS:1 COG:no KEGG:HSM_1646 NR:ns ## KEGG: HSM_1646 # Name: not_defined # Def: cytotoxic domain-containing protein # Organism: H.somnus_2336 # Pathway: not_defined # 1 74 357 430 431 105 66.0 7e-22 MKGFPGLTEAKRKTPIQGGGGLRKRWKDKKGNIYEWDYRHGELEKYDKQGRHLGQFNHIT GKQTKPADKTRKVEK Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:45:37 2011 Seq name: gi|257443364|gb|ACYG01000009.1| Campylobacter gracilis RM3268 contig00049, whole genome shotgun sequence Length of sequence - 207750 bp Number of predicted genes - 206, with homology - 205 Number of transcription units - 69, operones - 41 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 12/0.000 - CDS 3 - 5442 5148 ## COG3210 Large exoproteins involved in heme utilization or adhesion - Prom 5498 - 5557 11.2 2 1 Op 2 . - CDS 5698 - 7713 1135 ## COG2831 Hemolysin activation/secretion protein - TRNA 8088 - 8164 77.1 # Arg CCT 0 0 - Term 8121 - 8175 0.9 3 2 Op 1 3/0.000 - CDS 8177 - 8557 355 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain 4 2 Op 2 . - CDS 8572 - 13125 4646 ## COG0642 Signal transduction histidine kinase - Prom 13155 - 13214 2.6 5 3 Op 1 . - CDS 13291 - 15093 1577 ## COG0322 Nuclease subunit of the excinuclease complex 6 3 Op 2 . - CDS 15074 - 15541 330 ## CCV52592_0937 hypothetical protein - Prom 15685 - 15744 5.6 + Prom 15294 - 15353 5.9 7 4 Op 1 . + CDS 15512 - 15709 87 ## gi|257458987|ref|ZP_05624106.1| conserved hypothetical protein 8 4 Op 2 . + CDS 15764 - 17299 1912 ## COG0519 GMP synthase, PP-ATPase domain/subunit 9 4 Op 3 . + CDS 17320 - 18243 518 ## Sez_1539 hypothetical protein 10 4 Op 4 . + CDS 18243 - 20312 718 ## COG1204 Superfamily II helicase 11 4 Op 5 . + CDS 20309 - 20551 146 ## gi|257458991|ref|ZP_05624110.1| cupin 2, conserved barrel domain protein + Prom 20771 - 20830 5.3 12 5 Tu 1 . + CDS 20905 - 22143 1121 ## Fluta_3776 hypothetical protein 13 6 Op 1 . - CDS 22519 - 22734 189 ## CFF8240_0071 hypothetical protein 14 6 Op 2 . - CDS 22721 - 24802 2703 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 24897 - 24956 6.7 + Prom 24873 - 24932 9.5 15 7 Op 1 . + CDS 25174 - 25362 158 ## gi|257458996|ref|ZP_05624115.1| hypothetical protein CAMGR0001_2516 16 7 Op 2 35/0.000 + CDS 25359 - 26327 764 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 17 7 Op 3 14/0.000 + CDS 26324 - 27097 230 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 18 7 Op 4 8/0.000 + CDS 27094 - 27648 517 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 19 7 Op 5 . + CDS 27573 - 27875 297 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 20 7 Op 6 1/0.222 + CDS 27876 - 29093 1645 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 21 7 Op 7 . + CDS 29090 - 29593 687 ## COG0716 Flavodoxins - Term 29594 - 29627 3.6 22 8 Op 1 . - CDS 29785 - 30321 -58 ## 23 8 Op 2 . - CDS 30347 - 30916 458 ## gi|257459003|ref|ZP_05624122.1| hypothetical protein CAMGR0001_2523 - Prom 30936 - 30995 7.1 + Prom 31416 - 31475 4.0 24 9 Op 1 . + CDS 31510 - 31941 425 ## NLA_16880 hypothetical protein 25 9 Op 2 . + CDS 31984 - 32196 248 ## NLA_16880 hypothetical protein - Term 32442 - 32476 -0.8 26 10 Tu 1 . - CDS 32643 - 32882 347 ## gi|257459010|ref|ZP_05624129.1| conserved hypothetical protein - Prom 33118 - 33177 5.5 - Term 33090 - 33133 2.2 27 11 Op 1 1/0.222 - CDS 33296 - 34372 1522 ## COG1932 Phosphoserine aminotransferase 28 11 Op 2 1/0.222 - CDS 34383 - 35549 1208 ## COG1570 Exonuclease VII, large subunit 29 11 Op 3 . - CDS 35542 - 36243 316 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 30 11 Op 4 . - CDS 36280 - 37698 968 ## CCV52592_1673 CHAD domain-contain protein 31 11 Op 5 1/0.222 - CDS 37747 - 38157 573 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 32 11 Op 6 . - CDS 38223 - 40055 2128 ## COG1154 Deoxyxylulose-5-phosphate synthase 33 11 Op 7 3/0.000 - CDS 40045 - 41154 1180 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 34 11 Op 8 . - CDS 41154 - 42230 1346 ## COG0077 Prephenate dehydratase 35 11 Op 9 . - CDS 42214 - 42543 67 ## gi|257459020|ref|ZP_05624139.1| hypothetical protein CAMGR0001_2540 36 11 Op 10 1/0.222 - CDS 42540 - 43853 1609 ## COG0019 Diaminopimelate decarboxylase 37 11 Op 11 3/0.000 - CDS 43899 - 44945 620 ## COG0795 Predicted permeases 38 11 Op 12 22/0.000 - CDS 44942 - 45499 727 ## COG0193 Peptidyl-tRNA hydrolase 39 11 Op 13 . - CDS 45508 - 46044 686 ## PROTEIN SUPPORTED gi|154149398|ref|YP_001406855.1| 50S ribosomal protein L25/general stress protein Ctc - Prom 46068 - 46127 3.9 - Term 46250 - 46299 1.2 40 12 Op 1 . - CDS 46300 - 47517 1185 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 41 12 Op 2 1/0.222 - CDS 47517 - 48524 1076 ## COG0176 Transaldolase 42 12 Op 3 . - CDS 48517 - 49140 780 ## COG0560 Phosphoserine phosphatase 43 12 Op 4 . - CDS 49172 - 49906 502 ## COG2908 Uncharacterized protein conserved in bacteria 44 12 Op 5 . - CDS 49949 - 50956 805 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 45 12 Op 6 3/0.000 - CDS 50958 - 51449 778 ## COG0782 Transcription elongation factor 46 12 Op 7 . - CDS 51498 - 52529 903 ## COG0763 Lipid A disaccharide synthetase - Prom 52703 - 52762 7.7 + Prom 52670 - 52729 6.5 47 13 Tu 1 . + CDS 52754 - 53254 434 ## CHAB381_1312 hypothetical protein + Term 53351 - 53386 -0.2 48 14 Op 1 1/0.222 + CDS 53667 - 54446 726 ## COG0496 Predicted acid phosphatase 49 14 Op 2 . + CDS 54439 - 55107 703 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 + Prom 55527 - 55586 4.6 50 15 Op 1 . + CDS 55789 - 56286 569 ## COG0778 Nitroreductase 51 15 Op 2 . + CDS 56289 - 57140 763 ## COG0157 Nicotinate-nucleotide pyrophosphorylase + Prom 57177 - 57236 11.9 52 16 Op 1 23/0.000 + CDS 57256 - 57957 1050 ## COG0725 ABC-type molybdate transport system, periplasmic component 53 16 Op 2 . + CDS 57954 - 58622 729 ## COG4149 ABC-type molybdate transport system, permease component 54 16 Op 3 . + CDS 58688 - 59233 906 ## COG2032 Cu/Zn superoxide dismutase + Term 59385 - 59434 3.1 + Prom 59399 - 59458 5.6 55 17 Tu 1 . + CDS 59636 - 60169 531 ## CCV52592_0134 hypothetical protein + Term 60191 - 60225 6.0 + Prom 60524 - 60583 5.6 56 18 Op 1 40/0.000 + CDS 60606 - 61268 790 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 57 18 Op 2 . + CDS 61287 - 62384 1089 ## COG0642 Signal transduction histidine kinase + Prom 62542 - 62601 6.7 58 19 Op 1 . + CDS 62677 - 63096 385 ## gi|257459049|ref|ZP_05624168.1| hypothetical protein CAMGR0001_2569 59 19 Op 2 . + CDS 63130 - 63561 130 ## gi|257459050|ref|ZP_05624169.1| hypothetical protein CAMGR0001_2570 - Term 63578 - 63622 -0.6 60 20 Op 1 . - CDS 63858 - 64454 779 ## COG4186 Predicted phosphoesterase or phosphohydrolase 61 20 Op 2 . - CDS 64537 - 66030 1392 ## PM0531 hypothetical protein - Prom 66051 - 66110 5.0 62 21 Op 1 . - CDS 66236 - 67351 1147 ## Calkr_1515 kwg repeat protein 63 21 Op 2 . - CDS 67348 - 67959 721 ## COG1446 Asparaginase - Prom 68137 - 68196 6.6 - Term 68211 - 68258 2.2 64 22 Tu 1 . - CDS 68378 - 68815 454 ## COG3059 Predicted membrane protein - Prom 68992 - 69051 6.7 + Prom 68977 - 69036 6.3 65 23 Tu 1 . + CDS 69057 - 69242 119 ## CCC13826_1813 PQQ repeat-containing protein 66 24 Tu 1 . + CDS 69403 - 70158 792 ## CCC13826_1813 PQQ repeat-containing protein - Term 70398 - 70436 -0.0 67 25 Tu 1 . - CDS 70454 - 71698 1081 ## COG0611 Thiamine monophosphate kinase - Prom 71816 - 71875 2.9 - Term 72063 - 72089 -1.0 68 26 Tu 1 . - CDS 72301 - 72603 297 ## gi|257459064|ref|ZP_05624183.1| putative lipoprotein - Prom 72679 - 72738 7.9 - Term 72720 - 72758 6.0 69 27 Tu 1 . - CDS 72774 - 74240 1958 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 74262 - 74321 4.2 - Term 75435 - 75473 1.2 70 28 Op 1 1/0.222 - CDS 75592 - 76341 787 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 71 28 Op 2 3/0.000 - CDS 76338 - 77036 829 ## COG0775 Nucleoside phosphorylase 72 28 Op 3 1/0.222 - CDS 77033 - 77977 1088 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 73 28 Op 4 . - CDS 77847 - 78599 614 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 74 28 Op 5 . - CDS 78650 - 79306 510 ## CHAB381_0694 TPR repeat-containing protein - Prom 79345 - 79404 2.7 - Term 79410 - 79447 6.0 75 29 Op 1 20/0.000 - CDS 79470 - 79943 540 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 76 29 Op 2 . - CDS 79999 - 81246 1317 ## COG0823 Periplasmic component of the Tol biopolymer transport system 77 29 Op 3 . - CDS 81262 - 81621 197 ## CHAB381_0691 putative periplasmic protein 78 29 Op 4 . - CDS 81676 - 82656 874 ## CHAB381_0691 putative periplasmic protein 79 29 Op 5 30/0.000 - CDS 82649 - 83047 525 ## COG0848 Biopolymer transport protein 80 29 Op 6 3/0.000 - CDS 83047 - 83622 549 ## COG0811 Biopolymer transport proteins 81 29 Op 7 42/0.000 - CDS 83625 - 84029 567 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 82 29 Op 8 42/0.000 - CDS 84040 - 85437 1580 ## COG0055 F0F1-type ATP synthase, beta subunit 83 29 Op 9 42/0.000 - CDS 85449 - 86357 892 ## COG0224 F0F1-type ATP synthase, gamma subunit 84 29 Op 10 41/0.000 - CDS 86370 - 87884 1406 ## COG0056 F0F1-type ATP synthase, alpha subunit 85 29 Op 11 38/0.000 - CDS 87896 - 88426 540 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 86 29 Op 12 14/0.000 - CDS 88426 - 88941 540 ## COG0711 F0F1-type ATP synthase, subunit b 87 29 Op 13 3/0.000 - CDS 88952 - 89374 517 ## COG0711 F0F1-type ATP synthase, subunit b - Term 89395 - 89439 -0.6 88 29 Op 14 25/0.000 - CDS 89449 - 90312 941 ## COG1475 Predicted transcriptional regulators 89 29 Op 15 3/0.000 - CDS 90300 - 91091 696 ## COG1192 ATPases involved in chromosome partitioning 90 29 Op 16 3/0.000 - CDS 91088 - 91723 486 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 91 29 Op 17 . - CDS 92256 - 93176 924 ## COG0223 Methionyl-tRNA formyltransferase - Prom 93239 - 93298 2.4 92 30 Op 1 14/0.000 - CDS 93760 - 94815 694 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 - Prom 94835 - 94894 6.5 - Term 94882 - 94907 -0.5 93 30 Op 2 32/0.000 - CDS 94926 - 95183 414 ## PROTEIN SUPPORTED gi|154173918|ref|YP_001408822.1| 50S ribosomal protein L27 94 30 Op 3 . - CDS 95194 - 95502 435 ## PROTEIN SUPPORTED gi|118474453|ref|YP_892672.1| 50S ribosomal protein L21 - Prom 95543 - 95602 4.7 + Prom 95621 - 95680 5.2 95 31 Tu 1 . + CDS 95722 - 96150 560 ## gi|257459096|ref|ZP_05624215.1| putative lipoprotein + Prom 96228 - 96287 7.3 96 32 Tu 1 . + CDS 96309 - 96770 607 ## COG3019 Predicted metal-binding protein - TRNA 96938 - 97011 51.7 # Gln CTG 0 0 - Term 97827 - 97872 -0.7 97 33 Op 1 1/0.222 - CDS 97874 - 98932 898 ## COG0546 Predicted phosphatases - Term 98948 - 98978 3.0 98 33 Op 2 1/0.222 - CDS 98999 - 100021 815 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 100046 - 100105 7.1 - Term 100066 - 100115 11.7 99 34 Op 1 59/0.000 - CDS 100121 - 100510 592 ## PROTEIN SUPPORTED gi|154149095|ref|YP_001407121.1| 30S ribosomal protein S9 100 34 Op 2 1/0.222 - CDS 100513 - 100938 624 ## PROTEIN SUPPORTED gi|154148530|ref|YP_001407120.1| 50S ribosomal protein L13 - Prom 100965 - 101024 3.6 101 35 Op 1 . - CDS 101054 - 102547 1447 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 102 35 Op 2 6/0.000 - CDS 102534 - 103973 1155 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 103 35 Op 3 . - CDS 103960 - 106692 2091 ## COG3893 Inactivated superfamily I helicase - Prom 106910 - 106969 5.3 104 36 Tu 1 . - CDS 107151 - 107834 771 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 108076 - 108135 6.0 - Term 108623 - 108658 6.0 105 37 Op 1 3/0.000 - CDS 108684 - 109802 1465 ## COG0505 Carbamoylphosphate synthase small subunit 106 37 Op 2 . - CDS 109802 - 110353 820 ## COG2952 Uncharacterized protein conserved in bacteria 107 37 Op 3 . - CDS 110445 - 111695 1813 ## COG0104 Adenylosuccinate synthase 108 37 Op 4 . - CDS 111692 - 112555 817 ## COG0124 Histidyl-tRNA synthetase 109 37 Op 5 . - CDS 112552 - 116619 2997 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 110 37 Op 6 6/0.000 - CDS 116671 - 117360 589 ## COG4149 ABC-type molybdate transport system, permease component - Prom 117392 - 117451 5.9 111 37 Op 7 . - CDS 118344 - 119192 937 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 112 37 Op 8 . - CDS 119179 - 119571 411 ## CCV52592_0583 molybdenum import ATP-binding protein ModC (EC:3.6.3.29) 113 37 Op 9 . - CDS 119571 - 120338 920 ## COG0725 ABC-type molybdate transport system, periplasmic component - Prom 120379 - 120438 7.0 114 38 Tu 1 . - CDS 120440 - 121228 855 ## COG2005 N-terminal domain of molybdenum-binding protein - Prom 121251 - 121310 5.7 + Prom 121328 - 121387 8.0 115 39 Op 1 5/0.000 + CDS 121412 - 122131 828 ## COG2853 Surface lipoprotein 116 39 Op 2 1/0.222 + CDS 122134 - 122718 772 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 117 39 Op 3 . + CDS 122742 - 125549 2616 ## COG1033 Predicted exporters of the RND superfamily + Prom 125733 - 125792 4.1 118 40 Tu 1 . + CDS 125817 - 126596 557 ## CCC13826_0401 hypothetical protein + Term 126703 - 126756 0.1 - Term 126749 - 126790 5.1 119 41 Op 1 11/0.000 - CDS 126817 - 127761 537 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 127782 - 127841 6.4 - Term 127836 - 127862 0.1 120 41 Op 2 3/0.000 - CDS 127872 - 128186 483 ## COG0526 Thiol-disulfide isomerase and thioredoxins 121 41 Op 3 3/0.000 - CDS 128257 - 128595 145 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 122 41 Op 4 6/0.000 - CDS 128597 - 129865 1536 ## COG0460 Homoserine dehydrogenase 123 41 Op 5 . - CDS 129865 - 131070 1387 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 131133 - 131192 2.2 - Term 131468 - 131511 -0.9 124 42 Op 1 . - CDS 131594 - 132613 1366 ## CCC13826_1147 phosphatidylglycerophosphate synthase 125 42 Op 2 3/0.000 - CDS 132585 - 133286 197 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 126 42 Op 3 3/0.000 - CDS 133322 - 134137 611 ## COG0313 Predicted methyltransferases 127 42 Op 4 1/0.222 - CDS 134138 - 134338 314 ## PROTEIN SUPPORTED gi|154148107|ref|YP_001405830.1| 50S ribosomal protein L31 - Prom 134366 - 134425 10.3 - Term 134618 - 134667 -0.6 128 43 Op 1 . - CDS 134681 - 135337 773 ## COG1385 Uncharacterized protein conserved in bacteria 129 43 Op 2 . - CDS 135337 - 135819 391 ## CHAB381_0411 hypothetical protein - Term 136129 - 136176 3.1 130 44 Op 1 . - CDS 136197 - 136418 331 ## gi|257459144|ref|ZP_05624263.1| putative lipoprotein 131 44 Op 2 22/0.000 - CDS 136418 - 136999 659 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 132 44 Op 3 1/0.222 - CDS 136996 - 137961 693 ## COG0602 Organic radical activating enzymes 133 44 Op 4 . - CDS 137958 - 138839 1005 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 138943 - 139002 11.8 134 45 Op 1 . - CDS 139004 - 139363 653 ## gi|257459148|ref|ZP_05624267.1| conserved hypothetical protein 135 45 Op 2 . - CDS 139373 - 140242 865 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases - Prom 140277 - 140336 6.9 + Prom 140183 - 140242 5.2 136 46 Tu 1 . + CDS 140339 - 141244 682 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 137 47 Op 1 . - CDS 141393 - 141995 597 ## TDE0554 hypothetical protein 138 47 Op 2 22/0.000 - CDS 142050 - 143837 1861 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) 139 47 Op 3 30/0.000 - CDS 143827 - 145356 1604 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 140 47 Op 4 26/0.000 - CDS 145364 - 147211 1967 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 141 47 Op 5 30/0.000 - CDS 147204 - 147527 388 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 142 47 Op 6 28/0.000 - CDS 147529 - 148056 799 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 143 47 Op 7 31/0.000 - CDS 148053 - 149258 1360 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 144 47 Op 8 18/0.000 - CDS 149269 - 150264 1399 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 145 47 Op 9 . - CDS 150261 - 152966 3066 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 146 47 Op 10 . - CDS 152968 - 153675 592 ## CHAB381_0186 hypothetical protein 147 47 Op 11 . - CDS 153672 - 153902 263 ## CHAB381_0185 hypothetical protein 148 47 Op 12 22/0.000 - CDS 153899 - 155125 1418 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 149 47 Op 13 34/0.000 - CDS 155125 - 155913 832 ## COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit 150 47 Op 14 30/0.000 - CDS 155913 - 156422 739 ## PROTEIN SUPPORTED gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B 151 47 Op 15 . - CDS 156404 - 156793 441 ## PROTEIN SUPPORTED gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A - Prom 156944 - 157003 7.6 + Prom 156762 - 156821 5.0 152 48 Tu 1 . + CDS 156967 - 158529 1708 ## COG0306 Phosphate/sulphate permeases + Prom 158548 - 158607 5.3 153 49 Op 1 . + CDS 158751 - 159509 820 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 154 49 Op 2 . + CDS 159509 - 159856 366 ## CFF8240_0941 branched-chain amino acid transport protein AzlD 155 49 Op 3 . + CDS 159926 - 161278 1489 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 156 50 Tu 1 . + CDS 161392 - 161745 292 ## gi|257459171|ref|ZP_05624290.1| hypothetical protein CAMGR0001_2693 + Prom 161753 - 161812 2.7 157 51 Op 1 . + CDS 161836 - 162111 479 ## PSEEN1732 hypothetical protein 158 51 Op 2 . + CDS 162141 - 162704 475 ## gi|257459173|ref|ZP_05624292.1| hypothetical protein CAMGR0001_2695 159 51 Op 3 . + CDS 162746 - 163378 689 ## HH0199 hypothetical protein + Prom 163396 - 163455 8.7 160 52 Tu 1 . + CDS 163541 - 164116 338 ## gi|257459176|ref|ZP_05624295.1| putative adenylate kinase - Term 164493 - 164534 0.5 161 53 Tu 1 . - CDS 164547 - 165278 1011 ## CCV52592_1482 hypothetical protein - Prom 165300 - 165359 4.5 - Term 165427 - 165475 2.2 162 54 Op 1 . - CDS 165573 - 165794 89 ## gi|257459181|ref|ZP_05624300.1| hypothetical protein CAMGR0001_2703 163 54 Op 2 . - CDS 165766 - 167124 1502 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 164 54 Op 3 . - CDS 167121 - 167813 684 ## COG1427 Predicted periplasmic solute-binding protein - Term 167832 - 167876 7.6 165 55 Op 1 . - CDS 167892 - 168263 525 ## CCV52592_1000 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.-) 166 55 Op 2 . - CDS 168256 - 169704 1359 ## COG1488 Nicotinic acid phosphoribosyltransferase 167 55 Op 3 1/0.222 - CDS 169750 - 171006 1619 ## COG0281 Malic enzyme 168 55 Op 4 . - CDS 171008 - 172387 1275 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 172431 - 172490 7.3 + Prom 172373 - 172432 9.5 169 56 Op 1 . + CDS 172472 - 173362 849 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 170 56 Op 2 . + CDS 173479 - 174117 481 ## gi|257459189|ref|ZP_05624308.1| hypothetical protein CAMGR0001_2711 171 56 Op 3 . + CDS 174090 - 174506 394 ## gi|257459190|ref|ZP_05624309.1| hypothetical protein CAMGR0001_2712 172 57 Tu 1 . - CDS 174553 - 175140 408 ## TDE0543 hypothetical protein - Prom 175332 - 175391 6.2 173 58 Op 1 1/0.222 - CDS 175527 - 178790 4475 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 174 58 Op 2 22/0.000 - CDS 178790 - 179539 778 ## COG1792 Cell shape-determining protein 175 58 Op 3 3/0.000 - CDS 179532 - 180566 1278 ## COG1077 Actin-like ATPase involved in cell morphogenesis 176 58 Op 4 3/0.000 - CDS 180576 - 181814 260 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 177 58 Op 5 25/0.000 - CDS 181814 - 182602 839 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 178 58 Op 6 1/0.222 - CDS 182602 - 183051 605 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 179 58 Op 7 . - CDS 183085 - 184218 676 ## COG1636 Uncharacterized protein conserved in bacteria - Prom 184244 - 184303 6.2 + Prom 184200 - 184259 5.2 180 59 Op 1 . + CDS 184283 - 187645 3231 ## CHAB381_1357 hypothetical protein 181 59 Op 2 . + CDS 187696 - 188457 895 ## COG0289 Dihydrodipicolinate reductase 182 59 Op 3 . + CDS 188486 - 188803 338 ## CHAB381_0146 nucleotidyltransferase family protein 183 59 Op 4 . + CDS 188796 - 189152 307 ## SUN_0813 hypothetical protein 184 59 Op 5 . + CDS 189164 - 190510 1838 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 185 59 Op 6 . + CDS 190531 - 190887 472 ## COG3189 Uncharacterized conserved protein + Prom 191127 - 191186 6.9 186 60 Tu 1 . + CDS 191360 - 191785 663 ## COG2005 N-terminal domain of molybdenum-binding protein + Term 191798 - 191834 1.2 - Term 192230 - 192269 3.5 187 61 Tu 1 . - CDS 192417 - 192965 718 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 192986 - 193045 5.1 + Prom 193249 - 193308 2.4 188 62 Tu 1 . + CDS 193330 - 193857 648 ## COG1225 Peroxiredoxin 189 63 Tu 1 . - CDS 194605 - 195033 632 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 195155 - 195214 4.7 - Term 195151 - 195203 3.4 190 64 Tu 1 . - CDS 195251 - 196123 1081 ## COG2321 Predicted metalloprotease - Prom 196226 - 196285 5.5 + Prom 196087 - 196146 9.5 191 65 Tu 1 . + CDS 196313 - 196531 239 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Prom 196547 - 196606 2.5 192 66 Op 1 . + CDS 196704 - 196817 191 ## PROTEIN SUPPORTED gi|224417907|ref|ZP_03655913.1| 50S ribosomal protein L36 193 66 Op 2 48/0.000 + CDS 196821 - 197189 575 ## PROTEIN SUPPORTED gi|118475454|ref|YP_891266.1| 30S ribosomal protein S13 194 66 Op 3 36/0.000 + CDS 197200 - 197592 624 ## PROTEIN SUPPORTED gi|154147976|ref|YP_001405814.1| 30S ribosomal protein S11 195 66 Op 4 26/0.000 + CDS 197611 - 198237 974 ## PROTEIN SUPPORTED gi|154148523|ref|YP_001405813.1| 30S ribosomal protein S4 196 66 Op 5 50/0.000 + CDS 198249 - 199274 1151 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 197 66 Op 6 . + CDS 199275 - 199631 511 ## PROTEIN SUPPORTED gi|118474282|ref|YP_891270.1| 50S ribosomal protein L17 198 66 Op 7 . + CDS 199662 - 200222 529 ## COG3034 Uncharacterized protein conserved in bacteria + Prom 200653 - 200712 6.3 199 67 Op 1 . + CDS 200732 - 200998 475 ## COG0694 Thioredoxin-like proteins and domains 200 67 Op 2 . + CDS 200988 - 201536 557 ## CFF8240_0062 hypothetical protein 201 67 Op 3 . + CDS 201514 - 202824 1431 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 202 67 Op 4 2/0.000 + CDS 202841 - 203188 565 ## COG0853 Aspartate 1-decarboxylase 203 67 Op 5 . + CDS 203191 - 203520 574 ## COG0718 Uncharacterized protein conserved in bacteria 204 68 Op 1 1/0.222 + CDS 204110 - 204961 1110 ## COG0142 Geranylgeranyl pyrophosphate synthase 205 68 Op 2 . + CDS 204965 - 206893 2581 ## COG0021 Transketolase + Prom 206901 - 206960 6.3 206 69 Tu 1 . + CDS 207032 - 207331 388 ## COG3708 Uncharacterized protein conserved in bacteria + Term 207427 - 207461 3.0 Predicted protein(s) >gi|257443364|gb|ACYG01000009.1| GENE 1 3 - 5442 5148 1813 aa, chain - ## HITS:1 COG:NMB1768 KEGG:ns NR:ns ## COG: NMB1768 COG3210 # Protein_GI_number: 15677610 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Neisseria meningitidis MC58 # 54 755 83 876 2514 199 28.0 4e-50 MQILCLSSIFNGAGRLSAPTDIKEYFGVFTQAKKRLVALLLIGLLAPCFSYCEIIPDNSA PVNHRASVSQTPNAPATQIDIASPNDKGISINEYSKLNTPKEGTVFNNSQAGSISKTAGY IPPNPRLNRGEAKLIINQVNSPLPSNLQGNIEIAGRKADLIIANPSGINVNGATIINSSS TTLSTATPTYENEHLKSLNISKDGSINIRANGLNDNGDYLNVISNSLKLEGKIYANEINV VATDGKVSLKNTNSGLRQDNLKIEQEGGSHPKGVSIDSSALGGMYAGRINIISTKDGAGI NNKGAILADGSLKIDANGDLINEGKLGSNGQTQISSKTVSNQKGSKISASNLGIKASSVE NRGNIQANTLKIKVDRLDNIKGSISSSSALKIEARSLSNKDRAVIGAAKSERLNELGLNE SKGSFKTGVIPPSKNKLSIISADHISNIGGAILSNKSYLDIKESLLNDNSLMVLRALDSE IPNFYNLSDSTFIVQEGLSLRGNNLRNESSKIISLGGALLGYDSIDNSKGSILSGGNLII NKGTLNNEEGLISSKGDLALNLDSLSALGKLNSDGSLYLGLKDDLSYNGGIYASGDIYLN LQGNFIASQRLISNKDLIINAKGIKNESIIAALGNLALKAKEQILNLGSLIARGELITNS ESLINKKALVYAQDGVSLNAKNILNQDASNILSGGDIVINTSFLSNEALSNIISQRNLNI FNERGGEGKVDEIINASSLIYAKNTLNIGAKKLNNRSVNEPVKRVQSTGYNIDFTCNGDG WGCSGVAIPLKVNAAEIKERILKQNPNISPDELNAKIMEELSEQDMNLYVLSLYKNTRLP GEDTRLYDAITLSLKDNLFGIRRSKPHKKERLRQISYSINKEYITEDSLSKFMGSNIISA GDSNLNIDELNNDKSVIYAYNDLLLNVKSLNNRSLSLNHSMISQAEYRWKHKSHGGKGGY SDQKNIYYSQPAIVSIIGAKKDIKGYAGDISNLNSDGQINSGNAPTLIKEAFSKIDYSLI GKGLGNPNALNLNKNDLAPSLNNEADMQDIIRPSYINNLFSPISSKFYNTFYVYSELIPD FSYMHNKLSLLYDKKRTSLNSSEEDDGTLLSSAPSLIYAGGSIDLSVNGDLRNEGIIYAG SNMSLKAGSVSNLNSASIIAANALSISAKKDIINASSLIQGRSVNLNAGRDIVHKTLSKE INLNRAYGDQSSTYIGTISNIKSTEGSVALNAARDITVSGASIDSAANLILNAAKDVNIN SAEEKLSYNFKSKGGYYKEDIVKNTSSRLNAKDNILIKAGGIAISGADINARGGDALLQA KNSINLSGDIDSNYYESEFKEKGFASKKSTTTKALSQSVVPTSIRAKNIMLSSQEADINI AGSALKAKEAIDMQAGNNINISPLSYNSLNYKNSSKSSLGGLKASMDMHSLYKQNLQSSS LFSETADINLRAKNDLNLISADISSGRNLGLGAGNSINILAAKEYKQELSAHKRTRFNPI SVLHYPVAIAASVGAMDNIALEAGIEKIGGGSFTEVYRSDYNSKQVKEGISKLSDIKAAG DIGLNSPTAFITSNMKAGGDINIDAKNLTISAAANEYSEQSLQKSTSVSVAKVKDILSQM KPKSIDEFKKDTSIKVKLADASYDKSNTDLYGTKAVSSNMEAKNITLRGDNSLSVIGSNL KAKEDLNLISKDGNINIINSTDTASSSSNSKHLESSISLTVQNEYAQIAPAAIALQEAIK QLNQTKKQYKEYKDQKNALQDKLIELKNRYKAKEVGIDYSDIEDLQNIIEDVKDEEKYYL SNIALATANVASK >gi|257443364|gb|ACYG01000009.1| GENE 2 5698 - 7713 1135 671 aa, chain - ## HITS:1 COG:NMA0687 KEGG:ns NR:ns ## COG: NMA0687 COG2831 # Protein_GI_number: 15793667 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Neisseria meningitidis Z2491 # 187 671 86 580 580 268 33.0 2e-71 MFYQKPLFYYDDSKFKGASLQPRGVKSVKLILASIFIGLSLAPKALIAIPADISGAINSE EQRIRSIRQGTEDPFITIRSEESRASSATAEPKKAGICFKIYEIKLINAEAQNEQKSSAG SKFNEADYESKNKDDLKTPAVNSKDDASSGVIISKPNDENLGRAKVKTLAKSIGSTSNSD HSVPPGFERILSSALKELKFKSGDCLGSDKILALARAYNNKIISAGFITTSVSIPQQNIS SGTLLLALHPGRIGEISLEPGSRAKNQRSIFTAFGGDKRRELLSLRDMEQAMENFNAASR SEAEISLSPSAKQGYSDINISKQQSSPLLLRLSADNLGSKSSGKYQGAAILYGLNLLGLN ESVFASYGRNFLRGDKKSLGDDSKSGRSANYYAGFSIPFGYFSLSFWQNRYTYDQIVPGT YELYTYSGSSVRRNLDLNYVYFRNQNSKNSLFFRIWQKKYKNYIQDYELSNQRKREGGYE AGLKSKVFFDNSSVEMMLSYLKSSGAFNALRALEEEFGGGSSRYHLINAALNFKTRSSAI PLSYELELYARRASTHLSPIDRLNIGGYYSVRGFDGQMSLLGDSGFYIRNTLEYKYFKNN GVYLAFDVGKLSSKGKNYPAEGEMLSGGGVGLRGNISGSFSYDLLAAFPISKPENFKTDS PALNFSLSYDF >gi|257443364|gb|ACYG01000009.1| GENE 3 8177 - 8557 355 126 aa, chain - ## HITS:1 COG:SMc01370 KEGG:ns NR:ns ## COG: SMc01370 COG3706 # Protein_GI_number: 15965047 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Sinorhizobium meliloti # 5 123 4 122 455 84 42.0 4e-17 MRDLKVLTVDDDAINLKLLEVMLKKYGKFQTILQAKNGLDALAVLEVQPVDLILLDIVMP VMNGLEFLDNLHARESIAHIPVIVLTTDETAKREALNKGAYDFMTKPINDKDLHKKLDDV MNIIGD >gi|257443364|gb|ACYG01000009.1| GENE 4 8572 - 13125 4646 1517 aa, chain - ## HITS:1 COG:VC2453_1 KEGG:ns NR:ns ## COG: VC2453_1 COG0642 # Protein_GI_number: 15642449 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Vibrio cholerae # 371 633 249 514 516 210 45.0 2e-53 MNLNTTSALRLVSGIPLLLIFAFASYFLFISLQDYARVGILQQQIAKNSNLAALVEQVDK ERGITSAFLGSEGNPGMGTLLSGQRKKTDDALAKYKESKNISENVVKKTIFDIFAYGTGN DELLAAEADIDGLLDKLPQVRRDVDAQSKSFGELFSSYFQKFDDDVKTIQRVLREGLVSS NITVWTVSLLNTYEAMDATASERDYIIEYIIGSKAMNQAQLRTWASFNLSSSLPNYYFLP ESDARAAILKILDGEEFQNALRETAKISATLQQEADEGHYSVPFQEWFASTTLKYKKLSE ISEKINAELAAHADTYLAQRLRNLFIALGIWVLAAILVVFALGITRRLRQNVTDLGNVLS RIGDLTNQHEHIDVRTSEGVNKAYSLIEDALDLIAYQKGAAEDANKAKSIFLANMSHEIR TPLNGIIGFTELLKNTDLDEEKRDYVDTIEKSSENLLTIINNILDVSKIESNKVELEDIL FNPIQDFESAVEIYVAKAAEKNIDILLYIDPTLVHHLYGDITKIKEVLINLMSNAVKFTP EHGTIVVEILREPSKAPGEAIVTFSVEDTGIGISEDKLANVFNAFSQADSTITRKYGGTG LGLTISSKYVAMMGGKLQVKSTVGKGTRFYFTLAFKETQKTDADAVFESIKGLNFALLAD SADTMYNDIVKNYISKLGGKISIFNTNAQFRSAQNNNKYDALITRFKNYGEVSDILSMPT ILTLKPKELQSISISNSKIFTLTEPFNLTKFVKTLDKISKSGIALSRSDFAPQTHEIKLD TEVEKPIVADEMIMEEPVVKERPIINKLDELRHATTSSVDELRAILQSRRRTHDAEAHSA HKEEAVSKPSIAQELKKEAPKAEEPVIKPIDIEPMSDIKIEKTGPESPKINIDIPEIVIP HAEKPKVEPSSTKDAQTDIDEPISLEIPDDFVGLKTHATQTQAPKAETPSIDLSDIEIEL PKIKKEEEEVKAEPAKVEIPKAKVEMPNAKIEIPDIDIDLSDIKPSAKVQEPAKKVEIPS VEEEIPVAIKTEPEIPIAKASKPDTSSVSAHEDEISSVKLSEPESTAEKIIEPEPIAVEP EPITIEPELKPIEPKLEEVKQEPSNIESEPVTPVVEPAAQNIPAEEPSIEPEPVDIPKVE PATQNIHVEEPEIKPVSVKVEPVVIPQPEEEEMVEVPVTVYEDEQQEETIMVEEDVEVEE EVEVPVERNPADENVPLVNRKYNAKILIAEDNEINQKLMKHTLNSFNMNLTIVENGLLAL EARKANNDYDLIFMDISMPVMDGIESTKQIKQYEHENNLRHIPIVAVTANALKGDREKFM AAGLDEYCTKPIKKDILAQMLDNFIGDKRSDAAPAGGTTKKLVKKLVKRQVPKTVIKTVK VPKTIMKLVPKKSIVSDDVVKAKGARVPTKDILICKANIMESKIFASILKHQYKDVEIAG NFDQLISMAATGSYKLVLIDKKLAGLDLAALESLRRKAPATKLVLFSNDNDENPLFSEVA SYNITKSGLEKLAQKYI >gi|257443364|gb|ACYG01000009.1| GENE 5 13291 - 15093 1577 600 aa, chain - ## HITS:1 COG:Cj1246c KEGG:ns NR:ns ## COG: Cj1246c COG0322 # Protein_GI_number: 15792570 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Campylobacter jejuni # 2 599 6 600 600 659 57.0 0 MLIEEIKSLPAAPGVYQYFDAAGKLLYVGKAKILKNRVKSYFSFTPALAPSPRLSARIAK MISEAAHLEYIVTPSESDALILENSFIKQLKPKYNILLRDDKTYPYIYVNLDDDFPRFEI TRKIVKGKNIRYFGPYFHGAKEILQTLYMQFPLVQKKNCVKGKKACLFHQIGRCAAPCED KISKQDYARIVQSALAALKNPQKMVPQLQDRMARLAQSENFEEAAQIRDKIEILKQMNVK VEVDLAKLDDFEVFAIAARDGLVCAVHFSIREGKISASSSHIINCKAPSADDIANAYKQM ILSAFPAAAPVACAKIYVYDEFDDSDLVCEILSKRHERAFKIYAPKIGEKRKICEIAYQN CEINIKKHLKTHDYAFLQELKDYFNLTNLPVNIEVFDNSHMFGAAAVGAMISFQDGEFNK QNYRHKHLSSNNDYDQMREYLTSRALKFDELAAPDLWLIDGGTALLNLAEEIICSVGANV DIIAISKEKIDAKAHRAKGAAKDKICTKSGIFSLPTDDKKLQFFQRLRDEAHRFAISFHQ KSKRKLDLQSSKLLSLGVSKGSLKKLLDFYGDFESIYTASFDEIRSLTNIQTAEKILNNH >gi|257443364|gb|ACYG01000009.1| GENE 6 15074 - 15541 330 155 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0937 NR:ns ## KEGG: CCV52592_0937 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 151 1 146 154 93 37.0 3e-18 MENAREIIAHIRKNPLYAKMRERGEFLAILPLSWQRLIAFIYVKDGILMIAAKHPAGLCE LKRDSNINLIKDVLKRFVAARETAELCGVREIKFFVADRVMSRRRAQIYKAHLRLDGEAL SLERAKGEFKNKIQDPQIYKIFEEIRGLILANRGD >gi|257443364|gb|ACYG01000009.1| GENE 7 15512 - 15709 87 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458987|ref|ZP_05624106.1| ## NR: gi|257458987|ref|ZP_05624106.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 65 1 65 65 115 100.0 8e-25 MSDYFSCIFHRRILAFFILVLLSGCGYKAPPFYSDDDGSSSATAQNADANSTSSDKGSVR ILRDK >gi|257443364|gb|ACYG01000009.1| GENE 8 15764 - 17299 1912 511 aa, chain + ## HITS:1 COG:Cj1248_2 KEGG:ns NR:ns ## COG: Cj1248_2 COG0519 # Protein_GI_number: 15792572 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Campylobacter jejuni # 196 511 1 316 316 521 80.0 1e-147 MQTADILVLDFGSQYTQLIARRLREQGVYTELIAYDAPIDKIKAKNPKGLILSGGPASVY AKDAYFCDDRIFELGIPILGICYGMQLIAHKFGASVVPAGKKEYGKASLKLLRASKLFGG VEDNSTVWMSHSDKVESLPAGFEVMASSDESEWCVFGDEIRKIYALQFHPEVCHSEFGDR ILKNFAKEICGITSTWNMGSFAKEQMIKIKERVGSAKVLCAVSGGVDSSVVAALLAHAVP QSLIAVFVDNGLLRTGERKAVEEMFRLKLGVSLDVIDASELFLSRLKGAVDPEQKRKIIG ATFIEVFSKEAAKHKNVKFLAQGTLYTDIIESSVAGSSKTIKSHHNVGGLPKDMKFELIE PLREIFKDEVRQLGLELGLSREVVFRHPFPGPGLAIRIMGEVNTPSLELLRKADVILRDE LKSSGWYNKTWQAFCVLLNVHSVGVMGDNRTYENAVCIRVVDASDGMTASFSRLPYDLLE NVSRRIINEVPGINRVVYDISSKPPATIEWE >gi|257443364|gb|ACYG01000009.1| GENE 9 17320 - 18243 518 307 aa, chain + ## HITS:1 COG:no KEGG:Sez_1539 NR:ns ## KEGG: Sez_1539 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 14 305 16 306 309 283 57.0 9e-75 MKYLTSKYEYESIKTYCFHIVFDINDEGRVYQKIDEWNEEIFNEIPFFALGKKRALKISS ESSPRKATRDGMELLYKVKEIKEANEYFISADEDAEDKYLKRGEFGELILYYLLERQFNK PQLISKIYFKDSPSGMVHGFDAVHYDKEKNELWIGESKFYKSLSNALQDLANDLFGHFNV NFFDSEFAIINNRLSDYYDDKEVSDEIRKLIKSSTFIQRLSNINACFFALFDSKILDNFK FNDSGNTHNDFKDILEKFAKDTRKKFDQKIKDFGNKYRLKINLFLFPVESKFKLVKQLHE KLKKEQN >gi|257443364|gb|ACYG01000009.1| GENE 10 18243 - 20312 718 689 aa, chain + ## HITS:1 COG:yfjK KEGG:ns NR:ns ## COG: yfjK COG1204 # Protein_GI_number: 16130545 # Func_class: R General function prediction only # Function: Superfamily II helicase # Organism: Escherichia coli K12 # 6 660 16 685 729 242 26.0 1e-63 MFEILDLSDLNKSFKIAKEISANEDMDSLILVLENWKYVNENIRPVFIDLIESFGFYPYL KDKNELLNTAALVRCEYHKSKFINDFENNRVAFHYWQKVLEEKISNRQNLLISAPTSFGK SLLIQEFVARKKYSNILIIQPTLALIDETRKKLQNYQDFYNIVVNTSQDINETNNLFILT SERVLDILPKINNIDLFIVDEFYKISNHKHDDRVSQLNIAFYKVMFRNPQLILLTPSVDS VDNDFIKKYSLNFFKTEYSLVRQELEKISCSSKEERKMKLFGLLNSLSEPTIVYVKSPAQ AEELSNEFIRDNKKGTENTFPIFEWIDENVSVKWNLKKYLQKGIGLHNGQYPRHIVNAQL DYFNNNKINILFATTSLIEGVNTVAKNIIIYDMRKGTSKLTYFDFNNIKGRAGRMMKYYT GKVYCFDDPPRQEMENIDVPIVTQDDSLQSEILINLNNEDIKDQKRRIYEELIKDLPADL LQIFKSNYYSIEKQKHLYNCLKGRKKILNQLSWDAPIPTYKTLSRTLCIVDHLLEGNKGD SYKFLAQKCHQIIRGGNLHSIISNEIKYQHTLDANRGKNEESIINLSVSKVFGFIRNQAK FEIPKRLSVLESIVNYLNGKQAANYSAFISILEHEGVDNKLSILLDFGVPASALKKFKDM PNNNIIEYVKKNFEKIDLSTYEVDILKKL >gi|257443364|gb|ACYG01000009.1| GENE 11 20309 - 20551 146 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458991|ref|ZP_05624110.1| ## NR: gi|257458991|ref|ZP_05624110.1| cupin 2, conserved barrel domain protein [Campylobacter gracilis RM3268] cupin 2, conserved barrel domain protein [Campylobacter gracilis RM3268] # 8 80 1 73 73 120 98.0 3e-26 MICHFLSLVFKKKITPINKSLENFSYNDAQIYKRKKMSKIYNLNADMKVIAKSVVSKRFL IAETLTLRCLPLTMPSARSD >gi|257443364|gb|ACYG01000009.1| GENE 12 20905 - 22143 1121 412 aa, chain + ## HITS:1 COG:no KEGG:Fluta_3776 NR:ns ## KEGG: Fluta_3776 # Name: not_defined # Def: hypothetical protein # Organism: F.taffensis # Pathway: not_defined # 4 240 6 251 310 83 26.0 2e-14 MKILWQSRLQNRLRDIGENILIKGDRAFYAGDNDEQKQMKLRKFSLASGEQLASAPFRDF TRAATFDDDGRTLVVLGFIDTIYKFNAADLALISKHKKGVLKYGNFIALSSKDGDKKAIT ATDDTLFIYDFKTQAGTRKRLKGCAEIFKQDELNFLIFTRSGQIYRLNLSSCELKIIAKA CPMTQVQRAGGGYCIRVGEAGENGEIEGANELVFTDANFNVKFRVKLDFDFDKFELAADE SDGWRGHFINELNELRILNLMRSEAGGFENGGSGEFTQGEASKSRCEAMDKFEQNDPARY LATKPILTHKFKQKGARILGVVAAASCRAASTKYEAKQKGAFAEQNFTSEGGRRDENKRS ARRAPGKDEMYAHRMPEKNEWRQHTPECTRDLVLVDNAYDEDAEQILTCYEI >gi|257443364|gb|ACYG01000009.1| GENE 13 22519 - 22734 189 71 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0071 NR:ns ## KEGG: CFF8240_0071 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 9 71 4 66 66 67 55.0 2e-10 MKKFKFNPLAAPRAVARFLARADAALAPLIGLGDYEGYLRHFRSAHPDEVPLSRAEFFRA MQDSKAKNVKC >gi|257443364|gb|ACYG01000009.1| GENE 14 22721 - 24802 2703 693 aa, chain - ## HITS:1 COG:Cj0917c KEGG:ns NR:ns ## COG: Cj0917c COG1966 # Protein_GI_number: 15792246 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Campylobacter jejuni # 6 685 7 703 703 811 64.0 0 MKFWQKILWAAVAVIGAWCFGVLALNKGESISAVWLVIASACIYLIGYTFYGRFIAYRVF ELDDRRATPAVIRNDGRDYVPTNKYVLFGHHFAAIAGAGPLVGPVVAAQMGYLPGTIWLL VGVVLAGAVHDFIVLVLSTRRGGKSLGEMIKEEMGKLTGGIAMIGIFFIMLIIVAILAMV VVKALANSPWGLFTIAMTIPIAIFMGIYMRFLRPGKVSEASIIGFVLLMLALWGGHYVSI DPYWHDVFSLKGETLALLTIGYGFIAAILPVWLLLAPRDYLSTFLKLGVIIGMAVAIIFV APELKMPATTKFIDGTGPVFAGPIFPFLFITIACGAISGFHALISSGTTPKMLERETHAL FIGYGSMLMESLVGVMALVAACILSPGEYFAINSPAAVLGKDAVSAAAYINSIGFSITPE QIGALASNVGETTMMSRTGGAPTFAMGLTMLLHQIIGGKELMAFWYHFAILFEALFILTA VDAGTRTGRFMVQEILGNVYKPFSDTKNSLYGIIATVICVAGWGYLLYSGVTDPMGGIYT LWPLFGASNQMLAGIALLLATVVLFKMGKQKYAFVTIAPAIWVLITTLYATILKLMPANG ERVHDAVSHVAIAQNTAAKLASLSDPAAIEKAQAIIRNNVIDAVLCALFVVVTIIVIAQT IRMCLKISKGGANEGYFKLAESEHIDRGVYEKV >gi|257443364|gb|ACYG01000009.1| GENE 15 25174 - 25362 158 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257458996|ref|ZP_05624115.1| ## NR: gi|257458996|ref|ZP_05624115.1| hypothetical protein CAMGR0001_2516 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2516 [Campylobacter gracilis RM3268] # 1 62 1 62 62 123 100.0 5e-27 MPDQVCGYVLFRADIKSYASCKNDGAGRENFINSARINSWHRLNFKNIRRDEICAYSSLG GL >gi|257443364|gb|ACYG01000009.1| GENE 16 25359 - 26327 764 322 aa, chain + ## HITS:1 COG:Cj1615 KEGG:ns NR:ns ## COG: Cj1615 COG0609 # Protein_GI_number: 15792920 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Campylobacter jejuni # 9 318 16 322 328 297 54.0 2e-80 MSFKFYLFLIAAFILLALVAVSSGGASISLGDIAKFFTFGEIDETKQLILLQMRLPRLVM GILVGALLATSGVVVQSVFLNPLADPYIIGIASAATFGAVIAYLLGLSDVFYGIFAFLSA SALSIVIFKLAAHTRSISTLLIVGIAVSSFLGAFTSFAVYLIGEDSFRITAWMMGYLGGA NWYKIALLLPPLLFCMAYFYAKRHELNIILNGDEEAKSLGLNVEKSKKSLLIVSSLIIGF SVAFTGMIGFVGLIIPHTLRMALRTSSNAVLIPASALTGGLFLLFCDVIAKNILSPVEIP IGVVTSFFGAPFFLYLAFRKHA >gi|257443364|gb|ACYG01000009.1| GENE 17 26324 - 27097 230 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 228 279 510 563 93 27 8e-18 MKVSELNFSYGKRAILQDVCLNLERGKFYGILGPNGCGKSTLLKNILQILKPASGIIEIN GKRASEYGLKELAALIGFVPQKTALAAPLSVKEILLAGRFCRLKSAFSGYDASDHAKVEQ MAELLDVKKFLERSAFELSGGEFGRVLLARALVSEPEILLLDEPTGALDMNYAIEAMSIC ENLTRSLNLTSVIVLHDLNLASLFCDEIFMLKDGAVRYRGSASELFTPQIIKEIYGFDAL IVENLGTKFILPQKEKL >gi|257443364|gb|ACYG01000009.1| GENE 18 27094 - 27648 517 184 aa, chain + ## HITS:1 COG:Cj1617 KEGG:ns NR:ns ## COG: Cj1617 COG0614 # Protein_GI_number: 15792922 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Campylobacter jejuni # 1 144 1 149 268 106 44.0 2e-23 MKKILIALLSASFVFAKGLVVLDPAAVEIIYALGAQDQIAAISTTSMSKIRPEAETAKLP SVGTYVKPNLEKIVELKPDLVITSFHSAGVSENLKKLGLKSLAMDANSTADICQNVKKVA AIVKKEGEADKICAQMDGIFADKPALRGKKVRYFSAQTLRWLSMTKPSSATFSLASAPKI SQTA >gi|257443364|gb|ACYG01000009.1| GENE 19 27573 - 27875 297 100 aa, chain + ## HITS:1 COG:Cj1617 KEGG:ns NR:ns ## COG: Cj1617 COG0614 # Protein_GI_number: 15792922 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Campylobacter jejuni # 1 93 164 258 268 76 45.0 1e-14 MAFNDKTLIGDIFARFGAKNIADGLKGSTPSVSAEYILEQNPDIIVVVGGETEDFLKANP ILRNTKAVKSGKILKAPTLILRGSPQIGETVDEIYAEATK >gi|257443364|gb|ACYG01000009.1| GENE 20 27876 - 29093 1645 405 aa, chain + ## HITS:1 COG:FN0771 KEGG:ns NR:ns ## COG: FN0771 COG0635 # Protein_GI_number: 19704106 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 396 1 403 411 309 41.0 8e-84 MFKERIKSHHRSKLFESVSASENELFDALEQPAKDSDCVIYLHVPFCDNICSFCSMMRSK LGDELDEYAKFLIRQIKDYGEMPYFDTKKIKSIYFGGGTPSVFSETHFEKVLGALHKNFK IADDCEISVETTLHNLDLQKALSLQSFGVNRFSIGVQTFSRQGRALLNRVHKPARAIERL KDLREKFDGMLCCDIIYNFPNESVEEALEDARYVDELGLDSASFYSLMFFEGSELYKKID KSYYDLEIDKKLHHAFAGALLIGSDNFEVLELTKLARKGRDNYGYIKLSHKGTDILPIGN GAGGHVAGFGIYGVSGHKMISRIDEREAKYGVLSNLFQYPIVSLNELKEALSASIYDEAL QKLKEFESWGLLELKDEKSVLNLDGIFWGNNINEEIANIMKKDFV >gi|257443364|gb|ACYG01000009.1| GENE 21 29090 - 29593 687 167 aa, chain + ## HITS:1 COG:FN0772 KEGG:ns NR:ns ## COG: FN0772 COG0716 # Protein_GI_number: 19704107 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 166 1 166 169 90 32.0 1e-18 MKKIVLYTSQTGNTKKVGDAIAEQLGCKSLNFRDFEGEVDDYDFIALGFYVDKGEAEAKF TRFIRKIHGKKLGVFMTLGAEPDGEHSRKCLDTFEEGLKANGNEIIREFACQGAIDPNLL ETMRKMASSGNSPHLITPERLARWAEAAKHPDEKDLADAKAAFAGIE >gi|257443364|gb|ACYG01000009.1| GENE 22 29785 - 30321 -58 178 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIRSQWNLSHNEILSVACKSFAIFVLKIFAKEFYLCLRAHSKSTALKFIKLGDVLLRVRL KYFYAHAPHRCGGAMSGDGLSCGRLVATDGYRAAGGRRPIATHAARDDRGSRRSRPQRSQ PTLFAEASFSCSGCCKVTSGVLDDGITRRPLARKSWLFRPSERALAAQSRRHYLICCA >gi|257443364|gb|ACYG01000009.1| GENE 23 30347 - 30916 458 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459003|ref|ZP_05624122.1| ## NR: gi|257459003|ref|ZP_05624122.1| hypothetical protein CAMGR0001_2523 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2523 [Campylobacter gracilis RM3268] # 1 189 1 189 189 352 100.0 9e-96 MLISYSLQDNRKFAKMRTRISRRIYKGSKFIRAVCATDLLFAFAFSACLFIFEDDWIGFV REYYGDKSWIKSLGAILPTACAVFYIYAICVRSWLLNSAIYDKNKNVTFGDFSIEISDDL KGQFIFVSERDTLIYDAEFCEVVMERDFLVILLEGSLFIAVPNEAFKEISKEEFAAKLNK TISEAKSEI >gi|257443364|gb|ACYG01000009.1| GENE 24 31510 - 31941 425 143 aa, chain + ## HITS:1 COG:no KEGG:NLA_16880 NR:ns ## KEGG: NLA_16880 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 28 136 29 134 222 95 45.0 7e-19 MTNFEYASRINEAAGLDLDLDCEEIDLQDKLYGLFQCFMPDGAGVDSVFAPLQNGAELQA RIMPIYVATAQQTREAFDQGVAPGYFCPPQDPKFDDKALKSLALAYVRNLKIFAEFLGKS ELLKMLGEIKSARMQEGFDFAHH >gi|257443364|gb|ACYG01000009.1| GENE 25 31984 - 32196 248 70 aa, chain + ## HITS:1 COG:no KEGG:NLA_16880 NR:ns ## KEGG: NLA_16880 # Name: not_defined # Def: hypothetical protein # Organism: N.lactamica # Pathway: not_defined # 13 62 166 215 222 64 60.0 2e-09 MIDSPKLDAKLWVLGEAYYSINCDYLLSAYLQYPNYAQRPQEDFLKPYFELYLAGRQIAF ERGEIVVFTH >gi|257443364|gb|ACYG01000009.1| GENE 26 32643 - 32882 347 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459010|ref|ZP_05624129.1| ## NR: gi|257459010|ref|ZP_05624129.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 79 1 79 79 124 100.0 2e-27 MSFKRFFAVALVAGAFASVSAEASAAGDFCVKNGGELIVRKDGNGVDYTVCKLPDGTMID AEEFYKTGGDLSKFKSVNR >gi|257443364|gb|ACYG01000009.1| GENE 27 33296 - 34372 1522 358 aa, chain - ## HITS:1 COG:Cj0326 KEGG:ns NR:ns ## COG: Cj0326 COG1932 # Protein_GI_number: 15791694 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Campylobacter jejuni # 3 356 2 356 358 456 61.0 1e-128 MDRVINFSAGPSTIPLGVLKQAQEELLNYAGRGFSIMEISHRTKIFEEVLHSAMDRVRDL YGFSDDFTILFLQGGASLQFAQVPMNLYAGGVAEYANTGNWTSKAIKEAGVLGINYRVIA SSEDSKFDRIPEVKFSDDADYGYICSNNTIYGTQYPQLPQCGCPLVVDSSSDLFSRPVDL SSVGMFYGGIQKNGGPAGVTMVAIRKDLLDRANPKTPMILRYKTQADADSMSNTPNTFGI YMLNLMLGWIKDEIGGLAAMHERNKRKAALLYGAIDASGGFYRGHAQKESRSLMNVSFNI ADAALEPVFVAQAEAEGMIGLKGHRVLGGIRASIYNAINYEDVEKLIAFMSEFARKNG >gi|257443364|gb|ACYG01000009.1| GENE 28 34383 - 35549 1208 388 aa, chain - ## HITS:1 COG:Cj0325 KEGG:ns NR:ns ## COG: Cj0325 COG1570 # Protein_GI_number: 15791693 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Campylobacter jejuni # 2 388 1 387 387 299 45.0 5e-81 MLSVSELNAQAKALLETSFSLVEVEGEISKFRIQSTSGHWYFTIKDASAAIDCAMFKFNA ARINFIPAVGDKLIVSGKVSLYAPTGAYQIQVSNIRKSGEGELEAAFAALKERLSKEGLF DASHKKQLPKFAQSIAIITSAGSAAQADMLRTAQDRFALCKIDLYNALVQGEGAPASIIS VLRAADAKGYDAIVIARGGGSREDLWCFNDEALARAIYATKTPVISAVGHEIDFSISDFV ADHRSLTPTAAMIDLLPDICAIFQSLDGVSDALDRLIKDKISSAQNVLSLAALELKSKSI EPKISGSLAKLLNFELKFKSFIDSKLSAAEHTLSTKDELLAQKAKFFEITKDLVQIQKGG KTVALGELAAGDEFALCSQQLSKNAKII >gi|257443364|gb|ACYG01000009.1| GENE 29 35542 - 36243 316 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 1 225 1 221 221 126 35 9e-28 MFDEIAPTYDLANRAISFGVDVSWRKKAVELTLEKLKGKLVSIADVACGTGDMISSWRDG AAQHGVQIERIVGIDPSEGMLEVARQKFPSCEFIKATAGATTLDDASVDILSISYGIRNV VELDAALAEFNRVIKPGGSLVVLEFTKAASGGLAFKIRDFYVSKILPKIGAFISKNKEAY EYLPSSIGSFLDAASFSEKLKNADFELRVQKGFSFDVSTLFIAEKIAQKSDDA >gi|257443364|gb|ACYG01000009.1| GENE 30 36280 - 37698 968 472 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1673 NR:ns ## KEGG: CCV52592_1673 # Name: not_defined # Def: CHAD domain-contain protein # Organism: C.curvus # Pathway: not_defined # 1 471 1 465 467 125 26.0 5e-27 MQTKRKFLLSDDSILRTLERAGLKCRKVKIAWFYTSFYPEIYYIRQNDECSLHHKKEDLD RQTLNFKISKDDFKEALKSRIARVVQKSRYGFANDEAEFWLELYGGELNMLAVLRAKFKD ELSSANFDFAKTFGSTDFCEITDDYRYKSRYLARYGIPPRSLDFAHARNVFEKFSRVKFF APPYADSVKLARLALELAWTRACGAKSEYQKSLAPEALHELRVQIRKFRAVLKLSAPLFE AEKKDEILKLLAEFMSRSNQLRDLHVFAEFLKADDAPASFLQQLNLITKRSEDKILEFLS SAEFTNLSGAISGFLNGADGIYARSEYEKISKKFASARLCKLIKSLRAELKNLKQGSLLQ AFHDVRIGLKRLRYALEIFARSFDEGCVRELFKRTKAACEDFGALQDISVWRNFIAIYQK ASDKSGVAFAYLLALDARLNDRRAELEEKILNEKEPLLRALKRSLRKIKAYE >gi|257443364|gb|ACYG01000009.1| GENE 31 37747 - 38157 573 136 aa, chain - ## HITS:1 COG:Cj0322 KEGG:ns NR:ns ## COG: Cj0322 COG0735 # Protein_GI_number: 15791690 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Campylobacter jejuni # 1 135 1 135 136 150 56.0 8e-37 MSHVELLKTCGLKATPQRLCILKVLDRHEHPSIDDLYEGIKEDYPSISLATVYKNLNTLL DEGVVVEVNAPNKKSRYDIYQMPHIHVVCEKCGNVTDLFMDDAFNKDVLKNIERKAGNFI RKLNITATVEDCEKCR >gi|257443364|gb|ACYG01000009.1| GENE 32 38223 - 40055 2128 610 aa, chain - ## HITS:1 COG:Cj0321 KEGG:ns NR:ns ## COG: Cj0321 COG1154 # Protein_GI_number: 15791689 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Campylobacter jejuni # 2 605 11 611 615 768 62.0 0 MDIKNKSLEELRELCAQIRARIIEVVSKNGGHLSSNMGAVELIVAMHYVFDVTSDPFIFD VSHQSYAHKLLTDRWEEFGSLRQFGGISGYTKPSESKFDYFVAGHASTSISLAVGAAKAI KLKGEDRIPVVLIGDGSMSGGMTYEAMNELGDLRLPCIIILNDNKMSISKPIGAFSKYLS QAMAGETYQKFKSHVRELLSHAPQSATYMAKRFENSLKLIIPGMYFEELGLDYIGPVDGH NLEDLISALKTAKSARKPVVVHAQTIKGKGYDKAEGYLESWHGVGPFDIQSGEFKKKSAA KSATQIYAEALLNLAAKHENVVGVTAAMPSGTGMDKLIEKFPHRFWDVAIAEPHALSSMA AMAREGFKPYVTIYSTFMQRAFDQIVHDAAIMNLSLVLAMDRAGIVGEDGETHEGVFDVS FLNAIPNVSMCAPRDETSFKRIIEYSYAHEGVLAIRYPRGSFILNCDETGASAVELAKSV FLKRSDSARVALIGYGNGAGRAYKTAEALEGQIETDVVDLVFAKPLDAEFLRSLASKDKI WYVFSDNAKKGGVGEILSAFLQENEISDVKIVSFEFADIFLPHGKTADVERSLGLDIQTL AEQILSDKKY >gi|257443364|gb|ACYG01000009.1| GENE 33 40045 - 41154 1180 369 aa, chain - ## HITS:1 COG:Cj0317 KEGG:ns NR:ns ## COG: Cj0317 COG0079 # Protein_GI_number: 15791685 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Campylobacter jejuni # 1 366 1 363 364 447 60.0 1e-125 MKFNEFVENLSNYEAGKPIELVVREFGIRKQDVLKLASNENPFGTSEAVRDAIVQNAACA HLYPDDSMYELKGALASKFGVEPQNIIIGAGSDQIIEFALHAKLNSRRAILQAGVTFAMY GIYASHCEAKVYKTSAQEHDLAELLKIYNAHRDEISVIFLCVPNNPLGECLDAEAVYEFA GSVDEDTLLVIDAAYNEFAAFKDERKRLDPKLLIQNFKNVLYLGTFSKVYGLGGMRVGYG IAPRQIINALYKLRPPFNITTLSLAAAIAALKDEAFVQKSLQNNAAQMSRFEDFAREQSL EFIPSYANFITFKLSPPLDSSELCEQLLRRGIIIRNLKSYGLNAVRITIGTQGQNDRVFG TLGEILSGY >gi|257443364|gb|ACYG01000009.1| GENE 34 41154 - 42230 1346 358 aa, chain - ## HITS:1 COG:Cj0316_2 KEGG:ns NR:ns ## COG: Cj0316_2 COG0077 # Protein_GI_number: 15791684 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Campylobacter jejuni # 86 356 2 268 273 346 61.0 3e-95 MQNIDDLRVCIDRLDDEILRLIDERMGFVKKIGELKQTAGSAIYRPERERSIISRLDGGK ARNLSKEAIEAIFFEIFSVSRNLEKPQIVAFLGPFGTYSHQAAKSRFGAVSSYLPLSNIE AVFKELDSGEAKYGVVPIENNTEGAVGATLDCLRKYEGVKIVAEIYMDIHHCFASHCDDV STVDQIFSHPQGYNQCLKFLDDHGLSGVKFTATKSTALAAQMAAATPHSAAICSKIAADL YGVPMMFQKIEDNSANRTRFFVLSDFKNQKSDRNKTSILAKTDDRPGGLVDFLQMFRNEG INLTKLESRPVKLRDFKCVFYVDFEGHIDDERVARVLQNAQKNGHEITWLGSYINGGE >gi|257443364|gb|ACYG01000009.1| GENE 35 42214 - 42543 67 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459020|ref|ZP_05624139.1| ## NR: gi|257459020|ref|ZP_05624139.1| hypothetical protein CAMGR0001_2540 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2540 [Campylobacter gracilis RM3268] # 1 109 1 109 109 149 100.0 9e-35 MIRAVSRLKRSAILNFKSERAAALNFNAAASAALNFKCTAALNFRSRCDEFYRAFLARGS CGAAILSDEILSSRGQNFKACGKRGGVKFLKSAPKFAGEQKEGCDAKHR >gi|257443364|gb|ACYG01000009.1| GENE 36 42540 - 43853 1609 437 aa, chain - ## HITS:1 COG:Cj0314 KEGG:ns NR:ns ## COG: Cj0314 COG0019 # Protein_GI_number: 15791682 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Campylobacter jejuni # 1 437 1 400 402 507 60.0 1e-143 MDYSSLARKYGTPLYVYDFNEIQKNFIALKEVFAARKSLVCFAIKANSNLSVLKFLSDLG SGFDCVSIGELRRALYVGAKSYKIIFSGVGKQDGELEFALKSDILLINLESEAEMLRLER IAQKLNKPARISIRVNPNVDAKTHPYISTGLNENKFGVNIETARKMYIYAKKSKFLNPVG IHFHIGSQLTDISPICDAAKIVSDLLRELRALEIDIKFFDVGGGIGIRYEDEKQIVLYDY AQGILKSLSGLDVTIVCEPGRFIAGAAGVFLTRVLYEKQNCGKRFVIVDGAMNDLIRPSL YGAHHAIEIIGASEGINLNEPDASEVNLGSRGEDQTSGSDADQKNLGGVNLAETSLCDVV GPICESGDFLAKGVSLPSLQSGDLLAIKSAGAYGFSMSSNYNTRCRAAEVAVYDGQDRLI RKRESFDELIALEKDLV >gi|257443364|gb|ACYG01000009.1| GENE 37 43899 - 44945 620 348 aa, chain - ## HITS:1 COG:Cj0313 KEGG:ns NR:ns ## COG: Cj0313 COG0795 # Protein_GI_number: 15791681 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 1 348 1 352 352 258 44.0 1e-68 MKLYVKYAALSYLKYFFILLIALECFYVGIDVLTNLKDFPSSANTALLYIALTAAVALSY TLPLSLIFALILMGFNMIRSNELVSFYALGVSKNALIIPPFLIALAITASFIALNSTPFA YALKFQKNLTDLSPTGGDMFLKFEGKYIYIKALNGKNANDITIFNIGDNSVASRSHASSG EYAGKIWHLRDVNTTTLPTQLKLGGSGLKSKLSAQSEALKGFDPSSIASVYDTSNVYSIR DALRSIRTFSHQGVNISTIKASLYNMIFFPLFAPLAVLVLYYYLPVTGRFFNLALLSFGF FIATLCAWGVLFVLIRFSLNGVIIPEFGIIVPIIALLGFAAFLVFKHR >gi|257443364|gb|ACYG01000009.1| GENE 38 44942 - 45499 727 185 aa, chain - ## HITS:1 COG:Cj0312 KEGG:ns NR:ns ## COG: Cj0312 COG0193 # Protein_GI_number: 15791680 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Campylobacter jejuni # 1 181 1 180 181 199 59.0 3e-51 MILIAGLGNPAQKYADTRHNVGFMLIDEILKTGGFSELGSSKFQGELFKKGSLLLLKPQT FMNLSGNSVKAVNDFYKPERIIIVHDDIDLDLGAVKFKKGGSSGGHNGIKSIDALIGADY ERVRIGVGKKQQDQDAANFVLGNFSESEREKLGEILPYVARAVKELICSDIEQVAQKFTI KKARV >gi|257443364|gb|ACYG01000009.1| GENE 39 45508 - 46044 686 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154149398|ref|YP_001406855.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter hominis ATCC BAA-381] # 1 178 1 178 178 268 73 1e-70 MLEGIVRDSIGKRASKSLKRDGYLIANIYAKGFDNINAAFKVNDFIKAMRAKEDLPFEVS VGGKTYRVIVQEYQKHPVTNTLTHVDLRVVQDDVVSKYLVPVKVTGVAKGLKNKGILVQS KRRIAVKCAGKDLPNDFTLDVSDLDVGDSLLIRDIPVKEGVSIILDGSVAVVGVTSAK >gi|257443364|gb|ACYG01000009.1| GENE 40 46300 - 47517 1185 405 aa, chain - ## HITS:1 COG:aq_745 KEGG:ns NR:ns ## COG: aq_745 COG2805 # Protein_GI_number: 15606134 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Aquifex aeolicus # 33 372 23 363 366 297 45.0 3e-80 MAGSIDYSQYQVDASTLDFKQRDRLNKYLEFLIQNGGSDLHIKSGAVIRGRIHGELVKFS KTPFLKEDAMTLAKELLITRFPELIEKKSVDFTYKLNEDYRFRVNIFFQIDGISAVFRTI PVKIPEIDDLGLPPSIKDICDTAMRGVVLLTGPTGSGKTTTIASMINRINRQRTSHVVTI EDPVEFVFKDDKCIINQRAIGEDCNNFADSLRAALREDPDVIFVGEMRDLETIETALHAA ETGHLVFSTVHTIDAKETVNRIIAMFEQAEQERIRMTLASVLEAVISQRLARTIEGKRVA VVEILRKNTRIKDMILDARDDEIPDAIADGRNTYGMQTFDQHLLDLYRDGVITREEALDK ASKRNDLDLQIKNVDLAKKRDLAAESGESAEEMLAGEVVQLKEIR >gi|257443364|gb|ACYG01000009.1| GENE 41 47517 - 48524 1076 335 aa, chain - ## HITS:1 COG:Cj0281c KEGG:ns NR:ns ## COG: Cj0281c COG0176 # Protein_GI_number: 15791651 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Campylobacter jejuni # 7 331 3 325 325 275 49.0 7e-74 MYDKALNFSLWCDFLERDFIDKDFDELIKKGIINGATSNPAIFKNAILSSSAYDAAKEEF RKKEPKKLYEILATADIRSAAESLLKNFINGDDGFVSIEVDPCFADDAEAMYREGKHLYS TIGMPNVMIKIPATKAGYEAMRDLLKKGISVNATLVFSPEQTAKCIEAIKEGIAGFRRYF PKANLPKTVISIFVSRFDRLLDEKMAAAGLPTGKIGTMNASKCYNIIAKENLNYVKPLFA STGVKGDDLPKDYYVSELMYPGCVNTAPLETIGAFISGDQKPKMPPSDAQIEEFFARVAE AKIDMKKAYKKLLDDGLAAFEEAFKEIIKTLKKEK >gi|257443364|gb|ACYG01000009.1| GENE 42 48517 - 49140 780 207 aa, chain - ## HITS:1 COG:Cj0282c KEGG:ns NR:ns ## COG: Cj0282c COG0560 # Protein_GI_number: 15791652 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Campylobacter jejuni # 1 207 1 207 207 251 60.0 7e-67 MIKLCVFDFDSTLMDGETIGFFAAKMGTQRQVSEITKRAMAGELDFFESLSERVALIKGM KLSDAKAIAESLPFVCGASEIIAYLKNKGIKVIVFSGGFHLATDAAQKKLGFDASFANYL HEKNGILTGLFGGEMMFGYSKGVLLAQLKSLMGLRTSEVMCVGDGANDVSMFREAGLKIA FCANEILKEHASVCIEKKDLKEIMKYV >gi|257443364|gb|ACYG01000009.1| GENE 43 49172 - 49906 502 244 aa, chain - ## HITS:1 COG:Cj0286c KEGG:ns NR:ns ## COG: Cj0286c COG2908 # Protein_GI_number: 15791656 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 54 220 2 179 205 102 35.0 9e-22 MQNDQIQTIKPGAIFIGDAHAGASRPQFLKFLRALRSAQSLPPQIFMMGDMFDFLANTTY VQRFYEEEIALINELSRKCEIFYFEGNHDFNLREIFPRAKVYPNAAQPAKFICESGEAVQ IAHGDLFLPRLTQFALLSLRNRAFLKFMDLLDRALKFKISKVILKSQEGKNLYKKMPNFK DIIAPKIDFYAANLIIEGHYHQDEILYFGEKKYINLCSFGAGSKIYEVAKSEKFTLIPKN LNLN >gi|257443364|gb|ACYG01000009.1| GENE 44 49949 - 50956 805 335 aa, chain - ## HITS:1 COG:NMB1787 KEGG:ns NR:ns ## COG: NMB1787 COG0002 # Protein_GI_number: 15677627 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Neisseria meningitidis MC58 # 3 331 6 343 347 230 39.0 3e-60 MKKVGIIGVSGYTGLELIKALLPHPSFEISYLGASTDGEISEIFPQLRGVFEMHVEAADA RVAAQRCDLIFLALPHEKAMEFAREILKFKSVKVVDLSADYRLSRELYEKNYTTHLDPRN LAHAVYGLPELNREKIRAARLTANPGCYPTCSILALAPFVRLLDPGIGVFIDAKSGVSGA GKALKTSSHFVSVNENANAYSPISHRHADEIKEQLQILKGGEFSTLFVPNLLPITRGMLV SAFGVLQKSVDAEAVLREFYENEPFVRVRNEPVSIKNVVGTHFCDIFVKTAGDKIWINSA IDNLLRGASSQAVANANLMCGFAEATALPRIAHGI >gi|257443364|gb|ACYG01000009.1| GENE 45 50958 - 51449 778 163 aa, chain - ## HITS:1 COG:Cj0287c KEGG:ns NR:ns ## COG: Cj0287c COG0782 # Protein_GI_number: 15791657 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Campylobacter jejuni # 1 161 1 161 161 183 54.0 1e-46 MTTEPMTLYGYEKITSELKELQSVKLPHIVQQIDIARGHGDLKENAEYHAAREEQAFLLS RIAELSDIISRSKIIDPSTYEHDRVKFGSTVTFMDVETEREETYVIVGLSEADISRKLIN INTPLARQLLGKAEGDEVVLQLPSGTRDVEILSVEYKPIKFEN >gi|257443364|gb|ACYG01000009.1| GENE 46 51498 - 52529 903 343 aa, chain - ## HITS:1 COG:Cj0288c KEGG:ns NR:ns ## COG: Cj0288c COG0763 # Protein_GI_number: 15791658 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Campylobacter jejuni # 1 340 61 363 364 267 43.0 3e-71 MGFIEILPLILKAKRAIAQMVRLAAECDRVLLIDSPAFNLPLARAIKESGARAEISYYIL PQVWAWKPHRAEKLKAFCDNLLSIWPFEAKFFGADCEGDKGAVPQEAESKDAAPQETKDK DAAPKENAAHPSEQSAKTAKYSFVGHPLLDEIKFQKISYEKQGKIAFMPGSRRAEISRLM PIFRALVPKFESSERVLIIPPHLMDQRDEIYGPLEGFSIANDTPSTLKDCDFAFICSGTA TLEAAFIGTPFVLCYKARAFDVWLARKLVKLKHVGLANIIFDFLGEEPLHEELLQGEVSA QNLLSAYERCDAAKFKLASEKLRDYLKFGSSENVAKILTQPVS >gi|257443364|gb|ACYG01000009.1| GENE 47 52754 - 53254 434 166 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1312 NR:ns ## KEGG: CHAB381_1312 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 8 166 9 168 169 88 26.0 1e-16 MRNFKILALCGAFVMLLGGCGAAKYQKRQVTEDPAVTARFEALSKLGSPALVAKAAASEI AADVGGAKPHVKVAQFAFLEEISAQGSDLIYAYSLSPGWASLKSSDRQTYLKLLTKDITE NDCNAPSTRALLRSGVREVHRFFYDYPSSHLLDSQVSEEICRKAGL >gi|257443364|gb|ACYG01000009.1| GENE 48 53667 - 54446 726 259 aa, chain + ## HITS:1 COG:Cj0293 KEGG:ns NR:ns ## COG: Cj0293 COG0496 # Protein_GI_number: 15791661 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Campylobacter jejuni # 1 259 1 258 258 300 57.0 2e-81 MKEILITNDDGFEARGLLELASALRSVANVTIVAPSSEKSACSHSLTLTRPLRFVKLDDG FFKLDDATPADCVYLALRALYNRKPDLVISGINHGANVAEDVTYSGTCGGAMEGVLQGIP ALAVSQFYVADSLQRYGFDLACELTVDLVGKIFKNGFPLPPKQFLNLNVPAVSKQDFKGL TIAPCGEKLYDTDAQLNRNPRGIEYYWLGKSTLSFDASRNENSDISALFEGRATLSPIKL NLTAHEQMSALERWIRNDE >gi|257443364|gb|ACYG01000009.1| GENE 49 54439 - 55107 703 222 aa, chain + ## HITS:1 COG:jhp0692 KEGG:ns NR:ns ## COG: jhp0692 COG1179 # Protein_GI_number: 15611759 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Helicobacter pylori J99 # 6 221 5 221 235 210 48.0 2e-54 MSDVVIDRFSRSRLLFSEDFARLQSAKILICGCGGVGGAAIEALYRSGAVNLSVIDCDRF EITNQNRQLGSEHVGELKCEVFARKFKGVTPIAARIGEEFLSEFDLAQFDFVIDAIDDVG AKIALALRCSEAGSGFISSMGGAKRLDPAKIEIRSIWRTQGDPLARKIRYELRKRGFAGD FDVVCSSEPPRVKSMGSFMGVTASFGLFIASYVVRRLIGDQA >gi|257443364|gb|ACYG01000009.1| GENE 50 55789 - 56286 569 165 aa, chain + ## HITS:1 COG:AF2267 KEGG:ns NR:ns ## COG: AF2267 COG0778 # Protein_GI_number: 11499848 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Archaeoglobus fulgidus # 4 162 8 170 174 134 43.0 1e-31 MNEIFTRTSVRNFTEKMPSDDQIELVLKAAMQAPSAGNQRSWEFYVVRDRTALTLLSSVG TYGGCTKDAPLAIVVCTRKSGLKFQPYARYDCACAAENLWLAAHHLGLGTTWLGVAPDIY AMERVREILDLPGHLEAFCIMPLGFPSRVTKAHSRFEPAKIHFVG >gi|257443364|gb|ACYG01000009.1| GENE 51 56289 - 57140 763 283 aa, chain + ## HITS:1 COG:PM1111 KEGG:ns NR:ns ## COG: PM1111 COG0157 # Protein_GI_number: 15602976 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinate-nucleotide pyrophosphorylase # Organism: Pasteurella multocida # 1 281 2 279 282 167 32.0 3e-41 MFISQSKIDDLIASDGAFLDLTTELLQDFVDLNAPARLSIVTRQDLIFSGGQIAREVAAC LGCETQRLAREGSAFSAGDEIFSARGSFESLHKAWKIVQIMFEYSCKISTYAHEMVALMR EANPRCVLGATRKSFPFAKELCVNALIAGGGSMHRLGLHDSILFFSNHIRAFASFSEFCA QIAKFKERAPERKIMIEVASEREFSELLGYAPDAIICDKMSLSELRACVLKRDETAPQIK ICAAGGINKNNCAEFAATGADVLVSSAVWNQGVCDLSGKIELI >gi|257443364|gb|ACYG01000009.1| GENE 52 57256 - 57957 1050 233 aa, chain + ## HITS:1 COG:HP0473 KEGG:ns NR:ns ## COG: HP0473 COG0725 # Protein_GI_number: 15645101 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Helicobacter pylori 26695 # 2 231 6 242 246 59 30.0 4e-09 MKKIAFILALAASVSFCADQLIIAAGGGYKKPVSAVIENLKKEGMDVAGSFANLGQLVIQ SRENKISFIVGDEAFLKKSDLNITKFERIGRGTLVLVTPKNIEINDVSEIAKFDKIAMPD PKKAIYGIRTNEFLQNAKMDAVKDKILAVAGVPQVVAYVINGEVQAGFINSTEAVAKKDE FGSIIYIDESLYSPAFIGIARLSACGEQALCEKVMEEFKSDRSKEIFSKFGLK >gi|257443364|gb|ACYG01000009.1| GENE 53 57954 - 58622 729 222 aa, chain + ## HITS:1 COG:MA3902 KEGG:ns NR:ns ## COG: MA3902 COG4149 # Protein_GI_number: 20092698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 7 217 8 222 222 125 38.0 5e-29 MSDIAWIAHPLLLSVKALFCSFLLLITAGLAIAYFLAFSKAKFKKIVEILVIFPLIFPPI ATGFLLLYVFGKSGFIGSSLNLDIVFNFSSLVIAAFLVGLPLFVKPVCASFELFPKSLIE AAQILGKNRAQIFLFVILPSSLKTLGSALILALSRGLGEVGITLMLGGNIVGKTDTLSLA IYNAVYDGENERALILSVLLVIFSLILFFAISLLDKKRNLSK >gi|257443364|gb|ACYG01000009.1| GENE 54 58688 - 59233 906 181 aa, chain + ## HITS:1 COG:NMA1617 KEGG:ns NR:ns ## COG: NMA1617 COG2032 # Protein_GI_number: 15794511 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Neisseria meningitidis Z2491 # 6 181 11 186 186 172 51.0 3e-43 MKKFLISSILVASALIAHEHGDMQNFDPKTGKHLVIAMEQLGEKGNVSVGEVVAVETNYG VAFFPNLKGLTSGVHGFHVHQNADCGATEKGLGMKAGGHWDPSDTKKHSFAWDDSGHKGD LPALFVDAEGNAVYPVLAPKIKSLDELKGHSLMVHVGGDNHSDHPKPLGGGGARMVCGVI K >gi|257443364|gb|ACYG01000009.1| GENE 55 59636 - 60169 531 177 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0134 NR:ns ## KEGG: CCV52592_0134 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 112 1 112 138 124 60.0 2e-27 MKKIVLASVLVAGVLFAADFQNSTPEQINASVASADAKSLSEAAFEIDKRAGELRAQARD LKRGFKTEFKKKLDAMSVEDREKFLDEFRKNYNAQAGKLSVEQADRLDIELKDRGNFGKF KRPACGFGPHRSQMAPGECGHMPHKGMGGGAERAMPPRDAMPCNQNAGAAACPMTQQ >gi|257443364|gb|ACYG01000009.1| GENE 56 60606 - 61268 790 220 aa, chain + ## HITS:1 COG:Cj1223c KEGG:ns NR:ns ## COG: Cj1223c COG0745 # Protein_GI_number: 15792547 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 20 219 21 220 221 198 52.0 6e-51 MARVLIVEDEGMLLDMMCTYMRGAGHEVGGSKSYDEALSLAYEKSFDLWIFDVKIIGGNG FALLRELREAGRGAPCIFTTSLNTLQDVESGFRSGCDDYLKKPFELKELALRADNLLKRT FVHNAARRENIGGNFSFDMAQRALYHADRLVPMPQKQARLLALLLKNRDKLLSKDEIFAA LWDYDESPSELSLRVYIAELRKILGKDRIINASKLGYKYI >gi|257443364|gb|ACYG01000009.1| GENE 57 61287 - 62384 1089 365 aa, chain + ## HITS:1 COG:Cj1222c KEGG:ns NR:ns ## COG: Cj1222c COG0642 # Protein_GI_number: 15792546 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 116 357 141 387 396 164 36.0 4e-40 MRQILPIFLLYTLTSVLFLALVSSIFYEREKFFIADRDAFAIRDFKHGLEAKLARGGRLN ESDFDAMQAYAADLNSSDEIARDFEPRDDAPRVYMEGTSRIEQFNLTGKDGTEYYVAIKT EALEGKLAALKLKILAASALVLALILLIAYFIIRLSLRPLYEKIEFLGGFIRDTTHEIKT PLSVILMSIELFDTEPKKYLGNIKAGANTINALFEDLTALSLNKSGSGREVNLGELVQSR IKYFGIAAEQKRISLSADLRPVAFCADEFKLRKIIDNLLGNAIKYCDELGCVEVGLRERS LRIKNSGAGIARQNLPHIFELYTRFDERNGGFGIGLFIAKKYCDELGLKISCDSNEDWTE FEVKF >gi|257443364|gb|ACYG01000009.1| GENE 58 62677 - 63096 385 139 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459049|ref|ZP_05624168.1| ## NR: gi|257459049|ref|ZP_05624168.1| hypothetical protein CAMGR0001_2569 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2569 [Campylobacter gracilis RM3268] # 1 139 1 139 139 244 100.0 1e-63 MINIDEVSYKRAKFRQAGLEAASGGDTAASDAANASAPRRVRISAKSGFEAWSEKLLHGY GASFRYAVRIQLAPKAQLDADECILCEYKKRGSGLELIAALLVLIPVLGVLALCFKAEYG VVFNITILLAGFCMIMVFL >gi|257443364|gb|ACYG01000009.1| GENE 59 63130 - 63561 130 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459050|ref|ZP_05624169.1| ## NR: gi|257459050|ref|ZP_05624169.1| hypothetical protein CAMGR0001_2570 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2570 [Campylobacter gracilis RM3268] # 1 143 1 143 143 278 100.0 1e-73 MSDKNLITQNGTKFPIEKVHFSALSNRYGDITLYFYVTPFSQIFTLSIDGSDELFCFATH RYVRARASGRRPHIILNARRVRARQNSKSFEIFRALAECGAKNLNRIFKHDFAHKFCGAN PRTKSIVQILHLNFLDKFIPQIS >gi|257443364|gb|ACYG01000009.1| GENE 60 63858 - 64454 779 198 aa, chain - ## HITS:1 COG:SMb20398 KEGG:ns NR:ns ## COG: SMb20398 COG4186 # Protein_GI_number: 16264132 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Sinorhizobium meliloti # 1 190 1 161 164 77 32.0 1e-14 MIFFTSDLHFYHGNIMKYCPKFRNFNDVAEMNEKLIELWNAVVGPEDTVYDLGDFAFCNK LKDLKSVARRLNGSHVLILGNHDTLISQNKEALLRELKDDGNPIFSDILHYKELNFDGGA GAIKDGKTGMSICMFHYPVEEHNRAQKGSFMLHGHLHDRASSLEGRILNVGFDSHGKILS LDEIVQILGQKQIAARYL >gi|257443364|gb|ACYG01000009.1| GENE 61 64537 - 66030 1392 497 aa, chain - ## HITS:1 COG:no KEGG:PM0531 NR:ns ## KEGG: PM0531 # Name: not_defined # Def: hypothetical protein # Organism: P.multocida # Pathway: not_defined # 1 174 1 173 179 131 36.0 9e-29 MRKFIVVRGHAGSGKTTFAKEKIKEFKNEYPQAQIYHLENDMFLTDKAGVYTWSPKLLED AKRKVAREIKQAYKFALENKTKDVLIVLSNVSARTKELLSLKEQAAQNGFIFECFRMQNF FASEHDVDENTVIAMFIKVTNNKIEGEILIPPVNPMSQSVAQKIKDAAALNRRDLPFDAA QNTYVTKKYIAATQDKRLWSARQSELYPELRTYKYSKRVFFKADWDKALLEMRGLIMDDN LNIIVRPFKKVYNYSEFTSRKSLYPIDITDDTPVLAVRKVNGFLGCCTYVDIGESGASFN RRVIYSTTGSTDSRFAQMAREHCCKFEEIFKRYPNKTFLFEITDESDPHIVEEELGETFI GLIDVKTGAQASEFELDKIAASTAGALKRPFYKEGEQYLKTSFSELKNIVKEAKFEGFMV YIPSQNDFCFKMKTPYYLVNKFFARSKNEALSGKLDKTKLDEEFHPLVDHIKANEREFRS LDEQGKLGFIKEFLEKI >gi|257443364|gb|ACYG01000009.1| GENE 62 66236 - 67351 1147 371 aa, chain - ## HITS:1 COG:no KEGG:Calkr_1515 NR:ns ## KEGG: Calkr_1515 # Name: not_defined # Def: kwg repeat protein # Organism: C.kristjanssonii # Pathway: not_defined # 29 369 393 761 826 196 34.0 1e-48 MKKILAVLLLGLLGLEAKIIGQGELADYGLVFADGNAVDKDGNIKAVGKNFMVTGTFSDG LTVVFIGEQTFFMDESGRLALRLAPGTGFKTSFTEGLAGIAKNGKFGLIDKTGKVVVEPK FDDMGIAFRDGAIVVGEMKYGRMKYGYVDKNGRTIITPRYDEVRSFSDGLASVRIGDKWS VIDKSGATVSKLNLGRPVTFTEGLAPVKFNGLYSFVDKDASVVIEPKFELASLFSEGLAA VKSGGKWGFIDKSGNFAIEPRFDEVNKFKEERAVVRVGELWGIIDKSGKFILEPQKLDYI FDEFYGGMLNFRVNRKSGCLDIDGKVAIEPKFDSISVFEGNATAASVDYKSVFIDKKGRI LPISYYFEIED >gi|257443364|gb|ACYG01000009.1| GENE 63 67348 - 67959 721 203 aa, chain - ## HITS:1 COG:RSc1378 KEGG:ns NR:ns ## COG: RSc1378 COG1446 # Protein_GI_number: 17546097 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Ralstonia solanacearum # 31 122 3 97 320 79 49.0 3e-15 MKHFSLSKAVFMAASLVLLGLTVANAQEKFSPVIVIHGGTSGLDLTKEEFKIREEPMNRA LLAGQAVLERGGTAMDAVTAAIIVLEDDPNFNAGKGAVFTADGFNELDASIMDGSTKKAG AVAMDKNGNLAAATSIGGMINKMTGRIGSYQRCSDKELDLAISKKEFIDNFLKQDAEEGF SFEQNARADKWDKLASNLQKGQK >gi|257443364|gb|ACYG01000009.1| GENE 64 68378 - 68815 454 145 aa, chain - ## HITS:1 COG:PM1931 KEGG:ns NR:ns ## COG: PM1931 COG3059 # Protein_GI_number: 15603796 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 1 136 1 135 139 128 53.0 3e-30 MREIVKKFVAGDADIVFARLSVIIVLAVMGNYKWFEFEVEALKPLFSQTWLSFLPSALGD AGASYFLGVVETVGYLSLIAGFFKPKAGIVGDLIVIAMALTTLSLLPQLGKIDGFIFKDL FLLGLGLVLLKYDLARLCRGEKSCD >gi|257443364|gb|ACYG01000009.1| GENE 65 69057 - 69242 119 61 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1813 NR:ns ## KEGG: CCC13826_1813 # Name: not_defined # Def: PQQ repeat-containing protein # Organism: C.concisus # Pathway: not_defined # 1 47 1 47 309 76 72.0 3e-13 MLKSYPLAMQGVEFRGHGVTGIYEMSKRISFVHFAFAAPSEQNILSKHARLRAARYIFAR F >gi|257443364|gb|ACYG01000009.1| GENE 66 69403 - 70158 792 251 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1813 NR:ns ## KEGG: CCC13826_1813 # Name: not_defined # Def: PQQ repeat-containing protein # Organism: C.concisus # Pathway: not_defined # 1 251 117 309 309 237 52.0 3e-61 MSELGDAPAPVKQIYNDARTYEFDGFCVRMSSPFMMECIASQGGSNLNGAAADLGGTPNS SGAAGENLKNSSENDDAATVYKAHKSNPRNETSETKDKISNSGKQARKKSAAKGKTLWRL KLGAYLYTPVCLRGGALHFDAQDKRQGRETLYFGTTGKGGHLYAVDAASGEVIFKLDTGG TEYFAWYEDKILLADRRGKPVLISADDGSILKEVGFGKFQFGSDQIMLASGGRLYAVAND GAAMYAVCADI >gi|257443364|gb|ACYG01000009.1| GENE 67 70454 - 71698 1081 414 aa, chain - ## HITS:1 COG:Cj1458c KEGG:ns NR:ns ## COG: Cj1458c COG0611 # Protein_GI_number: 15792775 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Campylobacter jejuni # 1 156 1 157 273 159 50.0 1e-38 MDKERYIFEKFRSKLNGDDCAVIGERAYCKDLFVEGVHFRRGWLSLREIGAKAMLVNISD MIATNARAKYALLGLALPREIGTREIDELCAGVSETAREWGIRIIGGDTIGSDRIALSVS LIGKCKRPVFRSGARVGDLIAHTGELGSVGRDLAVLLRDEISPASSQTQNRNDKISSVQS SSTAPQGLNAETSTAQNPGDEVRSPDDKISLAHARLQSLDNETSAIQILDLEPQSLDDKI LPAYVEPLNLDAENSAENSVSQSRKNRKDSTSQSLACENSAPQSQAYEGSVFDLRAKISK NSRFVRPVLRDKFFYKAAKFISAAMDISDGLAQDLPRLLEASGVGARWIARPSEAALQSG EEYEILFSFAPKFLPKIYAIAAKTGVAINIIAEVCPRTPQSSMEFRGSSHHFAP >gi|257443364|gb|ACYG01000009.1| GENE 68 72301 - 72603 297 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459064|ref|ZP_05624183.1| ## NR: gi|257459064|ref|ZP_05624183.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 100 1 100 100 192 100.0 6e-48 MKRIFLLSLMAIVGLGLTGCKEDEPKKTVADYLLAPLEAKAKLELCEKMEPKDVINDKEC NNANRAKGFLRDQNLDPNGHWYEVDYYIKHPERISEEYKK >gi|257443364|gb|ACYG01000009.1| GENE 69 72774 - 74240 1958 488 aa, chain - ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 4 486 5 491 491 632 62.0 0 MATIQPSYKLFIDGEFVDAEGGASLDVFNPATGEKISKIADASKADVDRAVTAARKAFES FRRTSVYERSALLNKIADVLEQNAEFIATVETIDNGKPIRETRAVDVAWSIEHFRYFAGV ILGEEGSANMLKERYLSVVLREPIGVVGQIVPWNFPFLMGAWKLAPLLAAGDTCVFKPSS ETSLSILEFIRLIAPLLPKGVINVVTGKGSKAGEFVRTHKGLDKLAFTGSTEVGRGIALA AAQKIIPATLELGGKSANIIFDDCDFDVAIDGVQLGILFNQGQVCCAGSRIFVQEGIYDK FVPALVEKFKRIKVGDPLDPNTQMGCQINKKQADKILEYVKIGVEEGAKIAVGGKRHSAG EAFVEPTLLVDVRNDMRVAQEEIFGPVGVVIKFKDQDELVRMANDSLYGLGGAVFTRDIA KALTVARLLETGRVWVNTYNQIHAGAPFGGYKESGIGRETHKMILEHYTQTKNIYIDTIS KPSGFYEQ >gi|257443364|gb|ACYG01000009.1| GENE 70 75592 - 76341 787 249 aa, chain - ## HITS:1 COG:Cj0118 KEGG:ns NR:ns ## COG: Cj0118 COG0037 # Protein_GI_number: 15791506 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Campylobacter jejuni # 1 248 1 250 251 273 53.0 3e-73 MINLSKKLLRRVGQTNAKYKMFERGDKILLALSGGKDSMSLAHVLKHFQSVSPLDWEFRA VTVTYGIGEDLREISAHFKEHEIPYEIIDTKIFEFGKEKIRANTTFCSFCSRMRRGYIYS YALEHGFNKIAIAHHLDDAAESFFMNFTFNGALRTLAPRYVAENGLVIIRPFILARERQI AACARDNKLPIMREEEVCPARQYGGKEPTARAATKELLAQYEKTHPRFFISLQAAFANIH EETFFEPKF >gi|257443364|gb|ACYG01000009.1| GENE 71 76338 - 77036 829 232 aa, chain - ## HITS:1 COG:Cj0117 KEGG:ns NR:ns ## COG: Cj0117 COG0775 # Protein_GI_number: 15791505 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Campylobacter jejuni # 1 232 2 229 229 285 62.0 4e-77 MKVAILGAMPEEIEPLLSALRERGVSVEAVEHANNKFYAAKLNGHDLVIAYSKIGKVNSA LTATVMIEKFGARALIFTGVAGALKRGIKIGEILYATSLVQHDLDITAFGHPHGFVPGSK ISVQTDARLNSIAQSVAEQLGITLKSGVIASGDQFVSGEERKSWIERMFDASAVEMEGAS VAQVCDALGVPFCVLRAISDEAGHKAEFDFDEFMVKSAQTSANFVLKMIERL >gi|257443364|gb|ACYG01000009.1| GENE 72 77033 - 77977 1088 314 aa, chain - ## HITS:1 COG:Cj0116 KEGG:ns NR:ns ## COG: Cj0116 COG0331 # Protein_GI_number: 15791504 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Campylobacter jejuni # 1 308 1 304 306 343 61.0 2e-94 MKFAFIFPGQGSQSVGMGRGFYENSASARALLDGASEFTGIDFKNLLFEPNDKLDVSEFT QPAIALNSMMALAALQERLDQEKLNIAPQFLLGHSLGEFSALSAAGGIEPKQMLKLVNIR GRLMQSACEGKGAGMMVILALADEAVEKICADARSAGKQVWAANYNCDGQIVVAGKKDDL AALEGEFKAAGAKRAMLLNMSVASHCPMLGSASDELLEFLRPALKESFAPVIANATARAY RTKSEALELLKAQLISPVLYKQSIKNYEGETDCFVEFGAAVLKGINKKITQKPTFSITDL ASLDEFVKFAKENG >gi|257443364|gb|ACYG01000009.1| GENE 73 77847 - 78599 614 250 aa, chain - ## HITS:1 COG:Cj0115 KEGG:ns NR:ns ## COG: Cj0115 COG1047 # Protein_GI_number: 15791503 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Campylobacter jejuni # 1 157 3 159 189 188 57.0 7e-48 MANNRVIKMHYELKDGKTGEILESNLNSDPIAFLSGKDQIIQKLEDEILNLQAGESKTVR ISPSDGVGEYREDAVQILPKEQFAGIDLAVGMELFGQAEDGATTRVSVKAIGEQDVTIDF NHPYAGKELEFNIKIVENREATADEILTGQPESAHSCGCGHDHHHEGHECCGGHGHDHAR DHECSGATITEKITSAATGTTTSIRIFYEICFYLPRTGQPKRRHGQGVLRKLRICARAFG WGFRIYRYRF >gi|257443364|gb|ACYG01000009.1| GENE 74 78650 - 79306 510 218 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0694 NR:ns ## KEGG: CHAB381_0694 # Name: not_defined # Def: TPR repeat-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 3 218 57 271 272 225 62.0 9e-58 MQTSVDNTRESVEGLRSVLEGTSSKISNLENRVADLEIRTTGKSQGNSELDQMKRDIATI KAQIAEINKKLGSGSSVKKNAELDAGTASVPASTKSDSDFKSKDQASVLKEADTLYAKKD YSGAKERYNYLVSKNYKPAKANYMLGEISYFSGSYAEAINYYKKSISHNESQDYTPKLLY HTAISFDKIGDKDSANKFYKALKASYPDSKEAKAAPAR >gi|257443364|gb|ACYG01000009.1| GENE 75 79470 - 79943 540 157 aa, chain - ## HITS:1 COG:Cj0113 KEGG:ns NR:ns ## COG: Cj0113 COG2885 # Protein_GI_number: 15791501 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Campylobacter jejuni # 1 155 1 163 165 151 50.0 6e-37 MKHLVLSSIAVAALLLSGCSKKTPEADTTSTSGADRLAALASQIQSEVGTVYFDFDKFNI RADQQGTINNNAALFNQAGAESLTVKVEGNCDEWGSDEYNYALGLKRATAAKDALVAQGV NESRISVVSYGESNMACTEHSKECDAQNRRDEFKVGF >gi|257443364|gb|ACYG01000009.1| GENE 76 79999 - 81246 1317 415 aa, chain - ## HITS:1 COG:Cj0112 KEGG:ns NR:ns ## COG: Cj0112 COG0823 # Protein_GI_number: 15791500 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Campylobacter jejuni # 1 415 1 402 402 387 49.0 1e-107 MKKLLLILAFCSSIFAADATMSIVNEGVNLPKIVVQDASNLANSEFGNKFFKLMVGDLKV GATFEVSDEYLQSSYDADASSNSGSSGAALIVRYAVSDKSSPMSLKAKVLEANSGRVMYE KSFTLSNAEKYPFLAHMAVSEIVKQLGYSNVDWMKEMILLSRYTSTRESEIMVADYTLTY QQVVLRGGLNIFPKWASAAQNEFYYTYYVNKNTPAIYKFNLSNGSKSKIFTGHGMTIASD VSADGRKLLITNAPKDQPDIYLYDIASGSAKQITDYAGIDVNGNFIDGDSRVAFVSDRLG YPNVFATSINGGNVQQLVYHGKNNNSISTNGNYVTYSSRDGGGGFNIYLISTQTDMIRQL TASGKNMFPRFSSDGGSIMFIKQDGSGSSVGIIRVNENKSFQFPLRVGKIQSVDW >gi|257443364|gb|ACYG01000009.1| GENE 77 81262 - 81621 197 119 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0691 NR:ns ## KEGG: CHAB381_0691 # Name: not_defined # Def: putative periplasmic protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 20 110 189 279 288 71 39.0 8e-12 MLFAADLEQNFIYERNSVSQKSGKIKISKELDTYFSQMTSKLQTLWTEYQVGISDEARVC VEFSTDGRVTDYQILELGRSTEFNQKLRKFLDELPKRSFPKSPDNKSHTFEMVLSDVTN >gi|257443364|gb|ACYG01000009.1| GENE 78 81676 - 82656 874 326 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0691 NR:ns ## KEGG: CHAB381_0691 # Name: not_defined # Def: putative periplasmic protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 313 1 277 288 131 38.0 5e-29 MANYSNFTGVKYDNFKSFLIALFAYLLVIFVLLYQISKPQEKFKKYTDNPNDYMDVTFDF EIDDKLPSAPEIAKETKQGEFDNKNVKDVPEDKIKTTAQVVPPSPVEAKPKEPEKPKEEP KPEPKKDEPKAEPKKEEPKPEPKLEDKPSEKVVEKKEEAKPEPKKEEKPSLSDLFSDTTK DNKKLEESAKASDAVQSNKKSDKETATSSAKDKAASKNAVVKSDKLGGRTQRTGEYNAYY GAIEKKLQVLWSRYVATAKDDARIKIVFSADGRVADYTIIELGRETEFNQKLRDFLDNLS TQTFPKSPDGASHEIDTRMSDVMKTN >gi|257443364|gb|ACYG01000009.1| GENE 79 82649 - 83047 525 132 aa, chain - ## HITS:1 COG:Cj0110 KEGG:ns NR:ns ## COG: Cj0110 COG0848 # Protein_GI_number: 15791498 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Campylobacter jejuni # 5 130 5 128 129 116 51.0 1e-26 MYNFDENPELNITPLVDIMLVLLAILMVAQTAIIYDEKIELPSGSKAQVSENTAEFLLVR IGEDRKVYIDKSSMSLAEFPDNLVLLKGTGKYSLEKPVYIQADKRLVYDDVMFVLKSLKQ AGFTKVALQTNG >gi|257443364|gb|ACYG01000009.1| GENE 80 83047 - 83622 549 191 aa, chain - ## HITS:1 COG:Cj0109 KEGG:ns NR:ns ## COG: Cj0109 COG0811 # Protein_GI_number: 15791497 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Campylobacter jejuni # 2 181 3 180 184 167 54.0 1e-41 MLDLILSYFTRSTFITIFVLSWLSVYFVVTFTILISRFVGLSAWQHREAKALESLLMGGR ISLSGSIFQKVNTDKISKEALEIYKGKAERDSTSGLTWLSIVASTSPFIGLFGTVVSILH TFSKLGGGNSGIDTIAPAISEALVATGCGIFVAIPAYTFSLLIKRKAYEVMSIINRTADI LLFKANTGKAI >gi|257443364|gb|ACYG01000009.1| GENE 81 83625 - 84029 567 134 aa, chain - ## HITS:1 COG:Cj0108 KEGG:ns NR:ns ## COG: Cj0108 COG0355 # Protein_GI_number: 15791496 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Campylobacter jejuni # 1 128 1 124 129 94 42.0 6e-20 MKEFLLLDIVTPEGMVFSGEVKSVQLPGITGEMGILPGHASLLTGLKDKSEGGVVEIVDK DGKKQLVLVNDGFLEVTEEKTTILATQAVAIGGDSESAVAKSLQRAKDMLTSISSDAANS AAIMARVDEFARQS >gi|257443364|gb|ACYG01000009.1| GENE 82 84040 - 85437 1580 465 aa, chain - ## HITS:1 COG:Cj0107 KEGG:ns NR:ns ## COG: Cj0107 COG0055 # Protein_GI_number: 15791495 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Campylobacter jejuni # 1 465 1 465 465 838 90.0 0 MKGIISQVMGPVVDVDFKDYLPKINEAIEVKFDVEGAHRRLILEVAAHLGDNRVRTIAMD MSDGLRRGLEAVALGAPITVPVGEKVLGRIFNVTGDLIDEGEDEKFETRWSIHRDPPSFE NQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFA GVGERTREGNDLYNEMKESGVLDKVALTYGQMNEPPGARNRIALTGLTMAEYFRDELGLD VLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKLQERITSTKKGSITSVQAV YVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKV ARGVQAVLQKYKDLQDIIAILGMDELSEEDKLVVERARKIERYLSQPFFVAEVFTGSPGK YISLEETIAGFKGILEGKYDDLPENAFYMVGNIDEVVAKAEKMKA >gi|257443364|gb|ACYG01000009.1| GENE 83 85449 - 86357 892 302 aa, chain - ## HITS:1 COG:Cj0106 KEGG:ns NR:ns ## COG: Cj0106 COG0224 # Protein_GI_number: 15791494 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Campylobacter jejuni # 1 302 1 294 294 314 60.0 1e-85 MANLKDIKLQIKSVRNTEKTTKAMKLVSNVKLKNTKEAAMRSRAYAVKINEVLGEISARV KNYVGNNSGNDEKLRIFDTTREVKVVDLLFITADKGLCGGFNINTIKKIKALIEELKAKK IKVRLRAVGKKGIEYFDFQGIELLERYIGVSSSPSSEKANEIVQAAVKDFNEGKTDEVIL IHNGYLNMITQEMRVNTLVPIGEPAISEDALKTSTLEVEVESPEDEETLMLNLIQSYLSY SMYYALIDSLAAEHCSRMNAMENATNNAKERVSQLNLAYNKARQGSITTELIEIISGVES MK >gi|257443364|gb|ACYG01000009.1| GENE 84 86370 - 87884 1406 504 aa, chain - ## HITS:1 COG:Cj0105 KEGG:ns NR:ns ## COG: Cj0105 COG0056 # Protein_GI_number: 15791493 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Campylobacter jejuni # 4 500 2 498 501 807 83.0 0 MGAKIKADEISSIIKERIENFDLSVDIEETGKVVSVADGVANVYGLKNVMANEMVEFENG ARGIALNLEESSVGIVILGDTSGINEGSSVKRLGKLLRVPVGDALIGRVVNALGEPIDGK GAIETSDTRFVEEKAKGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTV AVDTIINQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVAAGASEAAALQYLA PYSGCTMGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLL ERASKLSDALGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESGLFNSGIRPAIN VGLSVSRVGGSAQIKAIKKVSGTLRLDLAQYRELQAFAQFASDLDESSRKQLDRGQRMVE ILKQPPYSPLPVENQVVIIFAGSRGFLDDVPTSSIGKFEAELYPYIEAKYPEIFEEIRSK KTIEKDLEENLIKALNDFKATFAA >gi|257443364|gb|ACYG01000009.1| GENE 85 87896 - 88426 540 176 aa, chain - ## HITS:1 COG:Cj0104 KEGG:ns NR:ns ## COG: Cj0104 COG0712 # Protein_GI_number: 15791492 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Campylobacter jejuni # 1 176 1 173 173 104 38.0 1e-22 MINNTSKRYVNALILSYKKDELCSVLQTLESVASAFRIPKFQDIVKSPTLKEESKVELIA SFIKNPSEKIVNFIKLLAKNRRIALIPQIVEELRKNIAALDNKYLGKIYSATEIDAAKIK ELEAKISNKFNADITLQPVKSELEGIKIEVEDLGFEISFSVDRLKQKMSEYILKAI >gi|257443364|gb|ACYG01000009.1| GENE 86 88426 - 88941 540 171 aa, chain - ## HITS:1 COG:Cj0103 KEGG:ns NR:ns ## COG: Cj0103 COG0711 # Protein_GI_number: 15791491 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Campylobacter jejuni # 2 170 3 169 170 105 39.0 5e-23 MKKYLFLFIIPALVLASGEHDGVKDYDVLWRSINFILFFGILFYLLKGPVKAAYQGRIDG IASRLEANQKILKESAARKEQAKKDLQDAKVQGAALIETAKKEIVFAAEKIKNATEQEIS NLQKSFDEQKDFEARKIKKEVVSEILDDVFASDDIKFGQDKLVKIVEKKVG >gi|257443364|gb|ACYG01000009.1| GENE 87 88952 - 89374 517 140 aa, chain - ## HITS:1 COG:Cj0102 KEGG:ns NR:ns ## COG: Cj0102 COG0711 # Protein_GI_number: 15791490 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Campylobacter jejuni # 3 140 4 141 141 57 33.0 7e-09 MLDVSLTAMITTIVVFLALIYFLNIKLYRPLLLHMEKREAIIKEDEANAMKNAQDADADK AEIVRIMDAAKLQAVKIKQEAMDSAKQAAAREIAEKKTAMEEDFDQFLGGLDEQKRNLKN DLQAKIPEFKNALSSAVAKV >gi|257443364|gb|ACYG01000009.1| GENE 88 89449 - 90312 941 287 aa, chain - ## HITS:1 COG:Cj0101 KEGG:ns NR:ns ## COG: Cj0101 COG1475 # Protein_GI_number: 15791489 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Campylobacter jejuni # 10 260 7 248 278 229 54.0 6e-60 MGKVKRALGRGLGAILDDVESSYNRELESGNADSLVIEIDVDKIEPNPYQPRQSFDEEAL RQLSESIARHGLIQPIIVIQKDDSYVLIAGERRLRATKLLGESKIKAVVADIKSQNLREL ALIENIQREDLNPIELAKSYKELIGEYRITQEELADIIKKSRTQITNTLRLLNLCSEVQD AISADKISQGHAKIMVGLEKEDQILALNTILGQRLSVRDTETLVKKLKDKTVPKEKKPGV EFQSFKPELLKLKAKLDQFGKISIKERKISIEFNEILQISEFLKKIG >gi|257443364|gb|ACYG01000009.1| GENE 89 90300 - 91091 696 263 aa, chain - ## HITS:1 COG:Cj0100 KEGG:ns NR:ns ## COG: Cj0100 COG1192 # Protein_GI_number: 15791488 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Campylobacter jejuni # 1 257 1 260 261 361 70.0 1e-100 MSEVITIANQKGGVGKTTTAVNLAASLAIKKKRVLLIDVDPQANATTGLGFNRSDFEFNI YHVLTGRKSMSEVIQKTELEFMDLVPSNIGLVGIEREVSEEKDFKLMLKNRISEVKDRYD FIIIDSPPTLGSITVNALVASDSVIIPIQCEFYALEGVALILNTVKVVKQTLNKNLKIRG FLPTMYSLQNNLAKETVANLREYFDDKLFRIGKSDDLVIIPRNIKLAESPSFGKPVVLYD IKSAGSIAYQDLAKSIMEQKWAR >gi|257443364|gb|ACYG01000009.1| GENE 90 91088 - 91723 486 211 aa, chain - ## HITS:1 COG:Cj0099 KEGG:ns NR:ns ## COG: Cj0099 COG0340 # Protein_GI_number: 15791487 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Campylobacter jejuni # 1 211 7 217 217 207 47.0 9e-54 MKIKFVEQIASTQEFLVGAVREGRITPPFAIAANRQSAGIGSRGNDWEGVSGNLAFSFCV AQTDLPADVPPQSASIYFAMIMQELLASLGSQLWLKWPNDFYLGERKIGGAMTNKIKNTL VCGIGMNLLGAPEYAGILDIKISAKDAIDGFFALYENKIPWKQIFRNFSLQFQKSQNFSV HLGGEKISLAQAKLCEDGSIIINEERVYALR >gi|257443364|gb|ACYG01000009.1| GENE 91 92256 - 93176 924 306 aa, chain - ## HITS:1 COG:Cj0098 KEGG:ns NR:ns ## COG: Cj0098 COG0223 # Protein_GI_number: 15791486 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Campylobacter jejuni # 3 306 4 305 305 335 54.0 9e-92 MNIVFMGTPEYAAKILRALAEAKFEIAAVFTQPDKPVGRKQILTPSEVKVYAQRHLPAVP IFQPATLKDEAVAAQIKELKPDFIVVAAYGKILPQAVLDIAPCINLHASILPKYRGASPI QSAILAGEKQTGVTAMLMDAGLDTGDMLDFAYTPCEDKTAAQLFDELGDLAGELIVRVLR NFTNLMPLKQEGAQATHCKKISKSDGLFSFEESARQIYNKFRALTPWPGIYLASGLKILE LELLHESCGRKFERAGEILHIDKPSFCVACGEGAVKIIKVQEPGKKPVDASAYLNGKRLK IGDLLC >gi|257443364|gb|ACYG01000009.1| GENE 92 93760 - 94815 694 351 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 2 287 3 286 345 271 47 1e-71 MFIDSVKLSVKSGDGGAGCVSFRREKFVISGGPDGGDGGDGGDVYFRVDKNSHTLSSYKG KREFKAQNGAPGEGRKKTGKSGEDLYLIVPPGTSVYDEDSGELVLDMLNDGETRLFLRGG KGGLGNVHFKSSINQAPEYAQKGLEGQTREVRLELKLIADVGLVGFPNVGKSTLISTVSN AKPQIANYEFTTLTPKLGLVEVDEYSGFVMADIPGIIEGASEGRGLGVQFLKHVERTKIL LFMLDLANYRSLEEQFDALRAETAKFSEGLAKRDYAIALTRADAAENLQEKFDAFLAHLG LAGTVGEMKFKQDIYELDAAKPFFVMPISSATGQNINELKFNLLELLKKEL >gi|257443364|gb|ACYG01000009.1| GENE 93 94926 - 95183 414 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154173918|ref|YP_001408822.1| 50S ribosomal protein L27 [Campylobacter curvus 525.92] # 1 85 1 85 85 164 94 4e-39 MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTATHPGCNVGMGNDHTIF ALIDGVVKFERKDKNRKKVSVYPAA >gi|257443364|gb|ACYG01000009.1| GENE 94 95194 - 95502 435 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118474453|ref|YP_892672.1| 50S ribosomal protein L21 [Campylobacter fetus subsp. fetus 82-40] # 1 102 1 102 102 172 82 1e-41 MYAIIKHGGKQYKVEEGNYLNLDHFNAEPKAKLELSEVLALNDGELKVGAPFVKGAKVVL EVVCEGKDKKVVIFKKRRRKDSKVKRGFRRQYTRVKVVSINA >gi|257443364|gb|ACYG01000009.1| GENE 95 95722 - 96150 560 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459096|ref|ZP_05624215.1| ## NR: gi|257459096|ref|ZP_05624215.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 142 6 147 147 249 100.0 3e-65 MRNLIAALVAAVFFIGCSNWNISNEPSGVRNQTKSQSSKTNIGGVNDKVQEVSTAGTTDM VETTLPDSTGMTNAPKDRSDAFHINQVISAWNKQPDSIKTTEDNGNIYTWKNYKPGCDVS LTSDSEGYVSKSAIKSALSQCL >gi|257443364|gb|ACYG01000009.1| GENE 96 96309 - 96770 607 153 aa, chain + ## HITS:1 COG:Cj1666c KEGG:ns NR:ns ## COG: Cj1666c COG3019 # Protein_GI_number: 15792970 # Func_class: R General function prediction only # Function: Predicted metal-binding protein # Organism: Campylobacter jejuni # 21 152 17 145 145 117 45.0 6e-27 MKKILFAGALLAALGSYAAAGEHIKVYHGESCGCCHNWAKYMEQNGFEVEMISLADEPLI QKKNELKLPLELASCHTAIIDGYVVEGHMPAGEIRTLLKNKPKDVIGIAVPGMPLEAPGM EQGSQPEVYDVVAFKKDGSYQSIATYKGKEKIK >gi|257443364|gb|ACYG01000009.1| GENE 97 97874 - 98932 898 352 aa, chain - ## HITS:1 COG:Cj1477c KEGG:ns NR:ns ## COG: Cj1477c COG0546 # Protein_GI_number: 15792792 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Campylobacter jejuni # 7 153 4 152 213 151 53.0 2e-36 MLKFQTTLLFDLDGTLIDSTPAILDGFHYAFAHLGVAEPSDEAIKKLIGHPLEVMFERLG VTRDVQNFVLAYKQRYAQTFLDQTVLLSGAFEAVRTASEFTNLGVVTTKTSKFSKILLQH LGIAEFFGTIVGREDVQDPKPSAEPILKALENLGICGATASKSPHAARGKTHDATADENT SAASRSAILSEISVPDLKSLPALDPNPSKVYEQNLSSIASQNSDRISFKNLSEAKSDGYE AGDKGQKSGVSIEGESDKGGARGGEIYDAHELNSTTCYDKICSDEILPSVSQNIFMIGDT LLDAIAAKSAAVRSVGVSCGYGNASELRAYFEFVCADAKEAVELIREISSKF >gi|257443364|gb|ACYG01000009.1| GENE 98 98999 - 100021 815 340 aa, chain - ## HITS:1 COG:Cj1478c KEGG:ns NR:ns ## COG: Cj1478c COG2885 # Protein_GI_number: 15792793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Campylobacter jejuni # 1 338 1 316 319 225 39.0 1e-58 MKKVLLALSLCASGALFASDADYHWEITPTVGGMTHEGNMDLDSNFMFGLRLAKNLQNSF IDQLEAGFDYSRHIGVEDLAYRAGNAKPSARYYHINAVKDLVNFTDNFKLYGLLGLGYMD YTKDVYNDGDQDSGFGQYGLGLKYYITDNFATKLEARDAIRFDDGNHVLFYTLGFAVDFG KRYADAAPAAAPAPTGCKDADNDGVCDNVDRCPGTPAGVVVDEYGCEKVIRLNLGVNFAT DSSKISPEFMNQIKNVSDVLVAHPDYKVILEGHTDSTGSNAYNQKLSERRAAAVGGALKS FGVDASRITTVGYGETKPIATNATKAGRAQNRRVDAKFRK >gi|257443364|gb|ACYG01000009.1| GENE 99 100121 - 100510 592 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154149095|ref|YP_001407121.1| 30S ribosomal protein S9 [Campylobacter hominis ATCC BAA-381] # 1 129 1 129 129 232 89 9e-60 MATIYATGKRKTAVAKVWVKPGSGKIVVNGMDLNTWLGGHEAIKLRVVQPLLATKQETSM DITAQTLGGGYSAQADALKHGISKALAAMDKDFRAALKPKGLLTRDSRVVERKKFGRRKA RRSPQFSKR >gi|257443364|gb|ACYG01000009.1| GENE 100 100513 - 100938 624 141 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148530|ref|YP_001407120.1| 50S ribosomal protein L13 [Campylobacter hominis ATCC BAA-381] # 1 141 1 141 141 244 81 2e-63 MTEITKPSEVKRDWVVIDATDKRFGRMLTEVAVLLRGKHKPSYTPNVDCGDYVVIINASK AVFTGNNKGDDKLYHSYSGYFGSVKSVKFQDLLKNNPAKLYRLAVRGMLPKTKLGKAMIK KLFVYEGGEHPHTAQTTKKGK >gi|257443364|gb|ACYG01000009.1| GENE 101 101054 - 102547 1447 497 aa, chain - ## HITS:1 COG:Cj1481c KEGG:ns NR:ns ## COG: Cj1481c COG1074 # Protein_GI_number: 15792796 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Campylobacter jejuni # 39 493 481 921 921 189 31.0 8e-48 MPLFEVQSDDYGYVAAFSYDDVLKGAAEQARRLVEECGVRADDIAILCWKNEHVSALKEM LSEFCEVCSGSNKALRCSEQVNAVIQYAKFCVGGDEIYLRNAEAILGRRLKKIAADLHKN AQKTAEFIASALKLNFVDPDLLLFFETLAKFNSFSEYLFANDETEVFAKEESGIKIMTVH KSKGLQFPHVIVCDRIGGKDRGESSKLATDYDFTTHKWRIFYKFASRKSLDAEFAALMDE NDRSAHEEDINKLYVAFTRAERSLIIVKRSESKIDQYNYSFFSPYAKKTKGAGVVEWLDI PDFQYGYVIPSSVKSEEKPPQKKVALVVGEPQGAQEKAGGGETEALSAIYFGEALHYALE MSEGFAADEILRGVSLAKGRYAKFLNDADFENIAARALGLSKNEEFLTLIKGAQAYKEMP IKSAEGELLRVDLACFRRDEILLFDYKSSEKYLAQNKAQVARYKSVIREFYPHARVCAFV LALEAASARLIEVNDEG >gi|257443364|gb|ACYG01000009.1| GENE 102 102534 - 103973 1155 479 aa, chain - ## HITS:1 COG:Cj1481c KEGG:ns NR:ns ## COG: Cj1481c COG1074 # Protein_GI_number: 15792796 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Campylobacter jejuni # 1 450 1 435 921 248 36.0 3e-65 MAKFENYLALEASAGSGKTFNLAVRFIELVLKGEPINEILALTFTKKAAAEMKTRIVEKF QNLLIVRDGALVPSPELAQICEDLNMSADEVLAAQRRLLPKFLNESLNVFTFDAFFAKAL RSFALNSGIDPGFENDESILGVQQREFLSAICKDGAILREVVDYVSDSGMTKSEFLNSLQ SIWRGDISINLPTLPASSALAEINEILSCLQKAARDAGVSAGAVNGLSPVSDLSKLSSGF ILSALANGSFDYPRSQLKKISHFDGELARLKDAVAREIAWMDATYAVKLAGLIKIYAEAL KSVQRKSGKLTFGDVTAAVHSLLNPSAEALQGNRELLYFRLDSKITHILIDEFQDTDICQ YEIMLPLISEALAGKGAEERCGSFFYVGDKKQSIYKFRGAERKIFDILREQFSQIKTQSL PRNYRSLKLIVKFVNEILRDKFASYEDQIAANKLDSDLPASVLTKNQGLSAFSSANAAI >gi|257443364|gb|ACYG01000009.1| GENE 103 103960 - 106692 2091 910 aa, chain - ## HITS:1 COG:Cj1482c_1 KEGG:ns NR:ns ## COG: Cj1482c_1 COG3893 # Protein_GI_number: 15792797 # Func_class: L Replication, recombination and repair # Function: Inactivated superfamily I helicase # Organism: Campylobacter jejuni # 1 269 56 317 548 167 37.0 8e-41 MKQAVSESKRAGERLKFPNELYEFMRNREYLFGFFKELATERVSIDALDLSDTYAWYAEH FEILRKLAGAYARILREHGFYDEITLPALYELNESYLRGFERIEINIDGNPSAFEFEVFK RAAELSEVVLSFRATTLNSKPVRAVEELCGISLELGFAYRVNLSTGEISSRELLSVGGAV VCRGFELRSLQASYVFEKISSFVRAGIAPESIAVILPDESFAGTLRLYDERIARARGSHR MLNFAMGEKLKDNLFYVTLEKISQCLKEARTPKFGVDYRAFKSPDGGFLDAEDSAVQQNL ALGNFASDNSASQNFAQQNSAFDCEIFSNSKTDLNFMSAREFENTENFEILREISAERAN SAEEQSFSLDLAEFQEPLECAQQRDYSVSAKRQEPSRKQQGSLRYSMQLEHIELEEEDGY SKSPKQRDRFRRSKIREGADEYPQRSNPQELDLFFASVGVDEALFGEFACDFAKQVSFEH FEALITKLACLPKISDALLQEKLKEPLYLIKILLRKFKDENLSLGNLIDLFLLEISRIKL DDVRGGKVTVMGLLESRGLQFDGVIIPDFNDDLVPKRSSGEMFLNSALRARAGLISHADR ENLQRFYYDGLLRGAKKSAICYLQSVEKLPSRFLKSFEVQQDAEFSQEDYLRLFGREEFK PALCGQEDPVARHDFFAEELSFSRLDTFLECKRKYYYRYVFGLKEGLKFGEDNALLGKIL HTSFQRLYERAGMKFSMEKFRSIYSQLAREAGIARFDVELELKAVEKLARLLEGHEQIWS FSGSEVSLKGELDGVRLSGRIDRIDEDKAGRKFIIDYKRGSAKKHMEKFQLTFYRALLAQ ECECAYLSLKDCAFAAPGDKTPSLENLRETLSSIGKEFASEVAFTRTEAVQSCEYCDYKI ICKGQIDGKI >gi|257443364|gb|ACYG01000009.1| GENE 104 107151 - 107834 771 227 aa, chain - ## HITS:1 COG:Cj1491c KEGG:ns NR:ns ## COG: Cj1491c COG0745 # Protein_GI_number: 15792806 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 1 224 1 224 226 194 49.0 9e-50 MSCALKELDVLLVEDDTKLLASLHKAFEGIFNNVYNAQNGLEGVKKFKKFSPNLVITDIL MPIEDGLEMIRQIKQIFPHAPIVVLSGFSREEQLKGVMEIGVERYYFKPVDIAAFVLEIS ALMKSKLDSVRVVNMGAGYVFDGLRCILLKDGEQIVLTKKELSFVSLLASRVGELVLYDE IKHYVWTEGAVSGTALRTFVKRIRDKVSGEIIKNVPSLGYKIELEPA >gi|257443364|gb|ACYG01000009.1| GENE 105 108684 - 109802 1465 372 aa, chain - ## HITS:1 COG:Cj1494c KEGG:ns NR:ns ## COG: Cj1494c COG0505 # Protein_GI_number: 15792809 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Campylobacter jejuni # 1 372 1 372 372 506 64.0 1e-143 MNAYIYIENGIYLQAKAFGKGGSAFGELVFNTSATGYEEIISDPSYAGQFIIFTMPEIGI VGINENDKESSKIHASGIFVRNFNNEPSNFRSQMSLEDYFLQNGKFGVYDIDTRFLTKML RDQGSLRAFVSTQISDKAALKKALSESARIEEINYVSIVSTKAPYKHTSGRWDAARGSYA QPASCGKKIAVIDYGVKRNILNELCDLGLGVEVFPHDVTAESLIAKLKEGQIDGVFLSNG PGEPRMLKEEIVQIKKMVEARVPIFGICLGHQLLSNAMGYETYKLKFGQHGANHPVQNLR TKSIEITAQNHNYNVPETIAQICEITHRNLFDGTIEGVRYKDYPVFSVQHHPEASAGPTE SKYIFKEFLEIL >gi|257443364|gb|ACYG01000009.1| GENE 106 109802 - 110353 820 183 aa, chain - ## HITS:1 COG:Cj1495c KEGG:ns NR:ns ## COG: Cj1495c COG2952 # Protein_GI_number: 15792810 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 183 1 183 183 159 48.0 2e-39 MRIRLPHVPYIAHKIALDLLNSGCVTLSAGIEPVAKEADEIIRADLQKERAIDERANELI DERVSELDEMSVNKKDMFWLIKRHIANDENFELNFEDRYGTISHKILETVWKKNLIDYKV SENRLKTIIYNAIDEYLKNYQKIEDAVYEKIEGYKQKLIPGTEEYELVFEKLYEEELRKR GML >gi|257443364|gb|ACYG01000009.1| GENE 107 110445 - 111695 1813 416 aa, chain - ## HITS:1 COG:Cj1498c KEGG:ns NR:ns ## COG: Cj1498c COG0104 # Protein_GI_number: 15792813 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Campylobacter jejuni # 1 416 1 416 416 604 68.0 1e-172 MSKVDVVIGAQWGDEGKGKIVDMISANYDFVCRSSGGHNAGHTIVINGEKFALHLVPSGV LHKNIINIIGNGVVINPDVLITEMAQFENLKGRFFISEKAFLNLQYHSLIDQAREKSKGE LAIGTTGKGIGPAYADKIARTGHRVVELLEPERLAEALSRDFASHESVFEKAGVKIPSKL EIYDELKRYKSALEPYIADTTHMLWKALDYDKRVLVEGAQGSLLDIDHGTYPYVTSSTTI AGGACSGLGLAPKDIGTVMGILKVYTTRVGNGAFPTEDKGPQGEAMREIGKEYGTTTGRA RRCGWFDGVATKYAVRLSGIDKLALMKLDVLDGFESIKICRAYRYKGEEIDYFPIDLEAA EPVYEQMPGWDSVKGISKFEDLPQNAQNYIRKIEELSGAKVGFISTSPERSDTIIL >gi|257443364|gb|ACYG01000009.1| GENE 108 111692 - 112555 817 287 aa, chain - ## HITS:1 COG:MJ1000 KEGG:ns NR:ns ## COG: MJ1000 COG0124 # Protein_GI_number: 15669189 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Methanococcus jannaschii # 14 182 8 189 416 62 29.0 8e-10 MIDSVSADFDHEIPNGSRLYFGKSAQLKRELENKASEILVKNGFSEILTPYFSYHQHLSV APQKLLKLSDPTNHELALRADSTVDVVRIVRKRLKDDKLRRLFYVQPTFKYPSDEFYQIG AELIGEKNLPLAIKIAQEFFKEFDLMPALQLSNIEIPKKICEILNLPLEIFEKGKIETLL EQNLPWLDATARATSLKDVQALRAQVPEELVPCLDEILSLGVDYERICVSLLYYSKMRYY DALFFRFLDAGAVYCNGGNYEIDGLKSSGFALLVDALIEKIMQKDEK >gi|257443364|gb|ACYG01000009.1| GENE 109 112552 - 116619 2997 1355 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 816 1242 322 761 776 150 28.0 1e-35 MKNKKDFVTERFNAALILGAALLTLVVVCEISFLRTRIATQLDLRTRTAITLLKNTDESL FSELEILKETILSLDARHEAMQSKLYADLIRNVVKSSHRFDAIFYLRARGAEQESLAHFS SDARISDLGEIRLADIAGELKKDEWVSRYMMMDGAWRYFLIKRVNADSYLLGFANTARPI ARLSSLGDILVFNAEGKFFNAPGSVTDILGQDFDFSRLGEVVSFEDESGLSFAYLAKFGD NFVMAHERAGYFLGADDFIVVALAAAILAYLILLISNFTFLKKRVFIPLAAVQNALRQGD YHSKIRDIEALNPLSSVLEISKSIDEVLKSNLRHGDFSLSFKDALKYSSLSVLSIDNVAG TIESASNGARELYGDDVVGRNIFALQAGSFYDHAYQTQRANYVKENYVVTRQETKNGVKD LYVKKSYIRDGSKISTLFVVLDASKYRRFYDETKQKYEYLNHAPIVTLVFDYTSGKIVDA SKNIKELWGYEAAQFLSGEIRLWDLLDEKDANEAKNEILNRLADMPAEELSFSQSYKIRH NDNIRYSYEVSIYVKKSAARAAFYFQNIDDDVKAIRGLQEDLDFYRTVIETRNFCTCLID LDAQTLSFDKNYFKILKYRGKRLNTAMSFGEFSYEIYFADLENFNKMIRECTAGLRSDFS CEFRLRNAANAYTWISMQGYVTEKHGSRSRLVKTTLEDISSRKQTELELNLNANVFSRSL EAILITDESGRVLRANNAFYEITGYSESQTIGKIPNFFAPTEGGADVMERIRKNLVGKQT SYKDEIYGLKRGGGTFPALFTAIAIKDDFSLTSNFILMFTEISQIKQKESELAKIAHHDA LTGLPNRVYFMKAAQRFTANSGENSKLMAVLFIDFDGFKAINDTYGHEVGDMFLQAISKA MSGLLRKGDILARLGGDEFGAIIGDLQSKDAAHVLLDRLLGISKMKFNLKGNEISASISV GAAFYDGSEKIDFPGLLSRADRAMYRAKTSGKNRYCIFERAEADGPSEEGIAAAIEEGEF FVLYQPIISGAQIYGYELLLRWDRGKRGILAPQDFAQILSEPRFELPISKFAFSKMMEFN AQTGANCSINVSLAVLTNDEFYDFVAHSLRDRANAKGELMFEITDFSEQNFKEFAPARGR YADLGIKFALNSANKNNIPFLNAQPFDIVKIDRELCLDIGKKKNAIRTMVEITGKLKREF GFALGAQGVENALSLRLLNNLKFNYLQGNFIAKALDRKEIDAFIARFKDTPKLAAIDKDE FISFLNALDYKELALGFIARGQTGELSPGEFESFRAKFGEILNKTQSAGSEKFALNTEIR KQILDILSLDYRALVSFIQSFKTRLNQFISDLEAA >gi|257443364|gb|ACYG01000009.1| GENE 110 116671 - 117360 589 229 aa, chain - ## HITS:1 COG:Cj0301c KEGG:ns NR:ns ## COG: Cj0301c COG4149 # Protein_GI_number: 15791669 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Campylobacter jejuni # 15 223 12 220 224 157 50.0 2e-38 MFEILKGLDYTPFLVSLKLASLTTLALFIICVPLAFFMARKNFRGKSVIESIISLPLVLP PSVLGFYLLVFLSPYSVLGEFFDKHFGLRLVFNFSGLVIASCIYSLPFMFSPLVSGFRSL PRSLFWACDSLGKGYFSKLFRVALPAIRHSMLSALVICFAHTMGEFGVVLMIGGSVSEQT KVASIAIYEATETLDFAQAHAYSALMLLFSFAVLLIMHFLGAKGAKIQA >gi|257443364|gb|ACYG01000009.1| GENE 111 118344 - 119192 937 282 aa, chain - ## HITS:1 COG:Cj0300c KEGG:ns NR:ns ## COG: Cj0300c COG1118 # Protein_GI_number: 15791668 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Campylobacter jejuni # 1 276 1 285 294 191 39.0 2e-48 MITIDCKKKISDDFSIDARLEINKGSFVCLYGRSGSGKTTLLRILAGFLRADSGSIKDGD RVLQEGNEFLSAGKRRIGFLFQDYALFENMSVTGNLLFARNDPQKAAMLLEILELSEFAK SGVEGLSGGQKQRVALARALMQEPEILLLDEPLSALDFTMREKIQEYLLKIHEQFHQTVI LVSHDVSEIYRLCKRVYEMKDGRIVRTGTPEEIFLKTSGSQKFSFVGKIVDLQARDGVKV AVVAIGSQLCEVVLSNAEADGLQVGDEVKAGAKAFNITLRKI >gi|257443364|gb|ACYG01000009.1| GENE 112 119179 - 119571 411 130 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0583 NR:ns ## KEGG: CCV52592_0583 # Name: not_defined # Def: molybdenum import ATP-binding protein ModC (EC:3.6.3.29) # Organism: C.curvus # Pathway: not_defined # 1 129 1 132 132 77 37.0 1e-13 MIRARINEILQKDGIHSVGFIAGGIKLRGVFLQLSSELKVGSEVYVGFKSTDVLLSREAL SGVSSENEIHGKIMSLSLGEILCTLRFEGKISFDVLISAHSAQELALREGDEVFAYINAT AIYIEKYDND >gi|257443364|gb|ACYG01000009.1| GENE 113 119571 - 120338 920 255 aa, chain - ## HITS:1 COG:HP0473 KEGG:ns NR:ns ## COG: HP0473 COG0725 # Protein_GI_number: 15645101 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Helicobacter pylori 26695 # 7 253 10 243 246 139 37.0 4e-33 MKLKAVLLGILTAGALSAGEVSVAAAANTTYAFDEIKAEFAKLHPQTTLNVSLGASGALS TQIKNGAPFDIFMAADMKFADDLHKEGFAAAPAKTYAKGKVAMFSVRGVDLSKGLEILKD PSVKTISIANPKTAPYGTASVEAFKKAGIYEDIKGKIVEAKSIGEALSQALKASDVGFIA ASAMYAPKMAKDGCNGKPCKQGENFVLVDTKLYEPIAQGMVVLNRAKDNAEAKAFYDFIL SDKGKEIFAKYGYEF >gi|257443364|gb|ACYG01000009.1| GENE 114 120440 - 121228 855 262 aa, chain - ## HITS:1 COG:RSp1153 KEGG:ns NR:ns ## COG: RSp1153 COG2005 # Protein_GI_number: 17549374 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Ralstonia solanacearum # 22 261 23 267 269 142 37.0 5e-34 MDAKFALEFLLGEETSLLAKHIKLLKAVDETKSITKAAEIVGVSYKNGWDALNLINNASK KPLIVRTQGTKKNSGSELTPYAHKLIRAYDAISHAGETFLSEILKLDEITEESLLSLEKI GMKLSARNQLSVEITDVQTGAVNSQITAKLAGGEILCATVTVESEKNLGLKTGKDVLFLF KAPSVIIAKGASEKLKLSTTNQIKGTISEVKIGAVNAEICLGTSSHQNITAIITRESATA MGLGVGDEVTAIIESSEIIIGA >gi|257443364|gb|ACYG01000009.1| GENE 115 121412 - 122131 828 239 aa, chain + ## HITS:1 COG:Cj1371 KEGG:ns NR:ns ## COG: Cj1371 COG2853 # Protein_GI_number: 15792694 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Campylobacter jejuni # 1 238 6 232 232 172 42.0 6e-43 MKFIKILFLAAALALCGCSQKQDVAPSDTDGFDEEFAKREVFDPLSGYNRVMTSFNDVFY SYILTPVASGYDYVMPDPIQGAFSNFFYNILYPMRLVNNLLQGKFENSWDETKRFLINST VGFGGLNDMAGKYYGIPRHDEDFGQTLGYWGVPAGPHIVWPILGQSNLRDTAGLVGDYFS NPINYIKDGTVRNSVNGFRIFNDYSRDPKFYEKMTKDAVDLYPFLRDAYEQNREKLIKE >gi|257443364|gb|ACYG01000009.1| GENE 116 122134 - 122718 772 194 aa, chain + ## HITS:1 COG:Cj1372 KEGG:ns NR:ns ## COG: Cj1372 COG2854 # Protein_GI_number: 15792695 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Campylobacter jejuni # 4 190 1 188 189 140 40.0 1e-33 MKILKVLALCGALLISAHAISDADIEPVMSQKVAEAVSIMRSSTPKDAKPAKIFALFDGY FDYKMMAKLSLAKHYASLSPAQIAEFDKAFEAHLKRSFIEKLSLYTDQDMKVLSKQSPSD KRRVLKTQVIGEQKNYDIDFKFYPNGADWRIYDVDIVGVSLIQTYRSQLGDVTQSLGFDE LIKRLNSTVINSGE >gi|257443364|gb|ACYG01000009.1| GENE 117 122742 - 125549 2616 935 aa, chain + ## HITS:1 COG:Cj1373 KEGG:ns NR:ns ## COG: Cj1373 COG1033 # Protein_GI_number: 15792696 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Campylobacter jejuni # 3 523 4 506 823 354 38.0 4e-97 MKKIFRLIVAFPKITLALFTALALFLGYYSTKLEIDASSQTLLLDNDKDLQIWREVSKRY ETPNFLVLAYTPAGDLLAPETIRKIAQMDAAFSKLDFVASVTDITNVPLLLNKGGGMSEL LKHIPTLTDADVNLTAARREFATSPFYASNLVSADFRTTAILINLKPQTRYEELLRLRDG AKSALEQAEHEGNRSGAQISQLKDALKVAEQNFKSYRDELREKDHRDIVALRALIAGFEK EFTGDRLFLGGLNMIADDMVGYVRSDLATYGLGALVLLLACFWLFFRQAKFILLPLIICA YSVVLAAGLFGFLDFEITVISSNFIALQLIITVSVCIHLIVAYREFSARFHAFSQRQLVY AVLRERAMPCFFAIFTTVIGFMSLIFCDIKPVISLGIMMSVGISISLVTAFGVFGAVMSL LKRTHNNRSFEQHFKFTLWCAETALRSRGAVYGVCAAAVIFGLYGISQLRVENSFIGYFK KSTDIRAGMEVIDTNLGGTIPLDIVVKFKSAGGADTASGSENSASGSANFKSGENSNPAG QNSIAHNSATKNSTATAQNSIAGNSIPQSSVAAAQNFNDQNFTEQSSFAAAQPSEAVNSD QTHAANLERNSTASDDFGDFEAEYAANENKPQYWFTSEKMRIIGKIDDFLKDKNVTGHEF IGNVSSLASLLKLGKQINQGRDLDDLSLALIYSEMPANYREMVLSPFVNIEASEAHFSVR TIDSDPRLRRAKFLKDLQSGLNSLLEGEQASAQISGIMVLYNNMLQSLMSSQIDTLGITV LVLFVLFVIIFRSLSYALIAIIVNLIPLCACFGIMGVAGIPLDIMSITIAAISIGIGVDD VIHYIYRYKREFARLGDEAAAIRASHASIGYAMYYTSFAIILGFSVMMMSNFWPTIYFGM LICLVMSLLLLGALIILPSLIMSRKGLKFSLFKAK >gi|257443364|gb|ACYG01000009.1| GENE 118 125817 - 126596 557 259 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0401 NR:ns ## KEGG: CCC13826_0401 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 10 222 20 232 256 73 29.0 9e-12 MKYTLGAALAALILVGCGEDEIGLVKNYTLSDFKSMSIGAAIEGSKICKNITWSKEENGG LKTVKMVCDVDMEKVKVDVDAFNKKYKEAMLNTSLRGAVLFYKDKSDDKQQRLLKLANEH CKINETKFQEELKDRGKIDYSFQKKPVDCDDKLKDEILKDGEPKTSAIYMSNIIDSLEDV AYYSQLTPSQIRLQLGRAAELPPQAAIELNFIVNADKSVSLSDKFIVTKDIIDDVIKIRS AFNNRKTAEDALATFYERQ >gi|257443364|gb|ACYG01000009.1| GENE 119 126817 - 127761 537 314 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 309 1 303 306 211 37 2e-53 MLDLAIIGGGPAGLAAGLYATRGGLKDVVMFEMGMPGGQITSSSEMENYPGVAAVTDGMS FMAPWQEQCFRFGLKHEMVRVLRVSKDGDGNFTIYLEGDQTRRARAVIVATGSTPRRAGI KGEDEFFGRGVSTCATCDGFFYKGKEVAVLGGGDTALEESLYLAKICSKVYLIHRRDEFR AAPSTVQKVRESENIELITNALVEQIKGDVSGVTGVVVKDKTSGAARELQLPGIFVFVGL DVRNEVLKDESGKFICDVTPGGQVAVNLKMQTSVHGLFAAGDMRQDAPKQVVCAAGDGAV AALSAIAYLQGHDK >gi|257443364|gb|ACYG01000009.1| GENE 120 127872 - 128186 483 104 aa, chain - ## HITS:1 COG:Cj0147c KEGG:ns NR:ns ## COG: Cj0147c COG0526 # Protein_GI_number: 15791535 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Campylobacter jejuni # 1 104 1 104 104 177 78.0 5e-45 MGKYIELTSENFDVTKEGVALVDFWAPWCGPCRMIAPIIEELANDYDGKAKICKVNTDEA QDLAVQFGVRSIPTILFFKDGELKAQLIGAQSKQIIADKLNSLL >gi|257443364|gb|ACYG01000009.1| GENE 121 128257 - 128595 145 112 aa, chain - ## HITS:1 COG:Cj0148c KEGG:ns NR:ns ## COG: Cj0148c COG0792 # Protein_GI_number: 15791536 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Campylobacter jejuni # 1 112 1 112 112 107 50.0 4e-24 MSLKEYLFGFACEDRAAEFLRGEGFEILKRNFRCRFGEIDIVARKDGILHFVEVKATSGD YDAAERVTGAKMAKILKAAEFYLMSCDKDEPWQIDVVEVYPKQIKFIANISF >gi|257443364|gb|ACYG01000009.1| GENE 122 128597 - 129865 1536 422 aa, chain - ## HITS:1 COG:Cj0149c KEGG:ns NR:ns ## COG: Cj0149c COG0460 # Protein_GI_number: 15791537 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Campylobacter jejuni # 1 421 1 415 415 451 60.0 1e-126 MKVAILGVGTVGSEVANILIKNKDIILARAGVSIEPVIGLVRDTSKKRGVQIPLSSDARS IIERDDIDVFVELMGGVEKPYEVVSEILKRKKAVVTANKALLAYHRYKLQALAGDTPFGF EASVAGGIPIIKTLREGLSANRIEKIIGIVNGTSNFILTNMMQKNEKFEDALKRAQELGY AEADPSFDIGGFDAAHKLLILASIAYGVHGDPEDILIEGIEEITQEDIYFAREFDFIIKL LAVAKRACDNKVELRVHPALISKDQMLSKVDGVMNGVSIYGDCVGESMYYGPGAGGSATA SAVISDLIDIARDNKNPMLGYKILPSENFMQILPSEQIRTKYYFRLRVRDEKGVLAKLTN IMSLNDLSIDSFLQKPKLKTDEEVTLFFTTHTCCEKDIKRAISVISGENFITQKPFMIRI ES >gi|257443364|gb|ACYG01000009.1| GENE 123 129865 - 131070 1387 401 aa, chain - ## HITS:1 COG:Cj0150c KEGG:ns NR:ns ## COG: Cj0150c COG0436 # Protein_GI_number: 15791538 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Campylobacter jejuni # 1 400 1 400 400 664 78.0 0 MFDEIRFSKIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDGRTPQHIIDKLCESAQ KDKTHGYSVSQGIYKLRLACANWYKRKYGVILDPESEIVAVMGSKEGFVHLTSAIVNPGD VAVVPDPAYPIHTQAFIIAGGNVVKIPLAYDENLNFNENKFFIDLQKTFDESIPRPKYVV VNFPHNPTTVVVQKSFYERLVAMARQERFYIISDIAYAEIAFDDYKTPSIFEIQGAKDVA VEAYTLSKSYNMAGWRVGFVSGNKKLVAALKKIKSWFDYGMFTPIQVAATIALDGPQECV EQIRASYEKRRNFLIDAFADAGWQIAKPSASMFAWAKLPPAAAHLRSMEFSKQLLTKARV AVSPGVGFGAAGDDYVRIAFIENENRTRQAARNIKKYLKEI >gi|257443364|gb|ACYG01000009.1| GENE 124 131594 - 132613 1366 339 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1147 NR:ns ## KEGG: CCC13826_1147 # Name: pgsA # Def: phosphatidylglycerophosphate synthase # Organism: C.concisus # Pathway: not_defined # 30 339 2 311 311 136 30.0 2e-30 MEEIKEKLNNTDEQAEQTEKPEQTQQPKSSDLDKLKSMDLIEIARTTRIDAQNLEYIINK DFEKLANFNVRGYIKILEREFGLDLSDWLSEFESAKASFAPVKKAKVEQVYGQRVSPNKS GSGWLLWLLAMVLIIGAIFYFGLYKSFGEFLGSLLWEQNKTTYSDAPIVNNTQKKLENIG IDVVSHNATDEKFALKSDANAAAVADENLSSLNALDRSIRIERASIKTEENSTDENATQS APAPSKDIVLSPRGKMWIGIIDLKSGKKREMVINAPYVVASQGDEELLISTGHGMFELGK ADGNVSFNEKNTQKLRVKDGNVTKISNDEFLRLNKGKKW >gi|257443364|gb|ACYG01000009.1| GENE 125 132585 - 133286 197 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 229 9 248 255 80 26 5e-14 MIIYGKQLFLHLLNRHPQKFIRIILAKECEKEIFKKIAATGVKIERADAKKAQALARGGN HQGFLAEVEEFSFGDLASVKDDKFVPILYGLTDVGNIGAIMRSAYALGADSVIVVANNLN MAGVVRASSGAAYELNVVKAADGLSVLNELKQSGFEIYAASAGGTSFKELELGAKNALVM GNEEEGIPARALKKCDCAVSIKMREGWDSLNVSAAFAILCDGILNGRNKREAK >gi|257443364|gb|ACYG01000009.1| GENE 126 133322 - 134137 611 271 aa, chain - ## HITS:1 COG:Cj0154c KEGG:ns NR:ns ## COG: Cj0154c COG0313 # Protein_GI_number: 15791542 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Campylobacter jejuni # 1 270 1 270 274 279 55.0 4e-75 MLYLIPTPIGNLSDISSRALEVLQSCEILICEDTRVSKKLLNLLSDKFQISFKISQFYSL HTHNEAEFFASFNPALLREKACAYVSDAGMPCISDPGIALVKFAQRSGVPYEVLSGANAL LLAAAASGLVEKEFSFLGFLNNDGAQRKAQILNLMQSPYPCVLYESPKRVVKLIEQIAGI DAKRKIFAIKEATKKFETKFFGSAAEVLLELKSANLNGEWCVVIDGAGEKSFEKITQEDI LSLEIAPKIKAKLLSKINGEPAKEIYKNLIR >gi|257443364|gb|ACYG01000009.1| GENE 127 134138 - 134338 314 66 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148107|ref|YP_001405830.1| 50S ribosomal protein L31 [Campylobacter hominis ATCC BAA-381] # 1 66 1 66 66 125 84 1e-27 MKKDIHPNFVETTVTCACGNTFKTRSNKAEIRVDICSNCHPFFTGSEKIVDSAGRVEKFK QKYGMK >gi|257443364|gb|ACYG01000009.1| GENE 128 134681 - 135337 773 218 aa, chain - ## HITS:1 COG:Cj0156c KEGG:ns NR:ns ## COG: Cj0156c COG1385 # Protein_GI_number: 15791544 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 218 1 218 218 169 38.0 5e-42 MVYFYDKLAGEQSLVLQNDQFLHLKVRRARAGERIDVRNLEDGASYLYEIVEISRKGAAL NLVFKSSVFTPSHDFCVAWAVVESAVIEKSLPALNEMGVGRLVLVYADLSQKNVRLDPQR MERILINSSQQCGRNSIMQIEVLSGSDELAQRYENVSLIDFGGKNIDIFGGDEIAFVGPE GGFSPREREKFKNAYALNSPYILRSNTALIATCAKLMF >gi|257443364|gb|ACYG01000009.1| GENE 129 135337 - 135819 391 160 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0411 NR:ns ## KEGG: CHAB381_0411 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 160 1 135 135 65 35.0 5e-10 MDYLYQSALGFHKFFALATAILTIIYLIFTQLKIDAAAEFCSRGKALNSAASAPQAGNLK QKSRSGLRFLRRIRLFLPIYYSCIAALIISGSVMLPVLRFDLSFRIYFMAAATLAMIILS AASYKRLKIAYLSQNFAPYQRKMRVILGLSLAIILIASVI >gi|257443364|gb|ACYG01000009.1| GENE 130 136197 - 136418 331 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459144|ref|ZP_05624263.1| ## NR: gi|257459144|ref|ZP_05624263.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 73 1 73 73 132 100.0 1e-29 MRNFFKFGAGFMRVFVACAIFVCALALGGCDDEKKDTLQKPPVDSEVPKDVPIAPSEPKV DINADMLPLPVTE >gi|257443364|gb|ACYG01000009.1| GENE 131 136418 - 136999 659 193 aa, chain - ## HITS:1 COG:Cj0159c KEGG:ns NR:ns ## COG: Cj0159c COG0720 # Protein_GI_number: 15791547 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Campylobacter jejuni # 1 192 1 192 193 248 59.0 3e-66 MIIRKLYEFENAHIVRLCGSKRCRTSIHGHSYRCEILLSSNFLDEAGMVYDFGYMKLGIR ELIDSFDHATTIYARDDASYIADLKKHSARWVQIPLNPSAEQFCRIFFVLIDRLLSLTQM QNGEREVKLHSVIVHETATGYAQCFREDAYNAQMGEIALEEIEFSPAVREEWKQPELWQK LLCGEKIIYPKDC >gi|257443364|gb|ACYG01000009.1| GENE 132 136996 - 137961 693 321 aa, chain - ## HITS:1 COG:Cj0160c KEGG:ns NR:ns ## COG: Cj0160c COG0602 # Protein_GI_number: 15791548 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Campylobacter jejuni # 162 321 86 247 247 176 49.0 4e-44 MRLVESFLSIQGEGKYAGRLAFFFRFAGCNLRCAGFGGERVSPKTGEILRGCDTIRAVFT NHFEHEEILNLAQLLNKISNLSGSSCFAPACSAPGFCAAESFFESDTLNSAAAQTPPRPN GSAKNSLNLKSENSLNFAAQNSSNLNPQSSASPQSAKLHQKPIIIITGGEPMLHHKEALF YEFICELLARGYEVHFETNGTILVDFEKFPAYKSSVFAVSPKLSNSAEPRERRLNFAALR NLKQNAKDSFYKFVISPEFDAQPEIREILAACESEVYCMPRGADRRELESGAQFCVDFCL KNGYNYSDRLHIRIWGEKDGV >gi|257443364|gb|ACYG01000009.1| GENE 133 137958 - 138839 1005 293 aa, chain - ## HITS:1 COG:Cj0161c KEGG:ns NR:ns ## COG: Cj0161c COG2896 # Protein_GI_number: 15791549 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Campylobacter jejuni # 1 293 29 320 320 382 64.0 1e-106 MPATPFNWVPRENILSFEEMFLFVKVAIDGGVKKIRITGGEPLVRKGIEDFIKMIADYAP GIDLALTTNGYYLKNYARALKNAGLKRINMSLDSLRPERAKFIAQRGVLYNVLEGLDAAL EAGLKVKLNTVALKGINDDELIYLLEFAREKDCQIRFIEFMENTHAGDLTGLKSNEILDI LRRKFIFTALPKSQSSPASLYALGDGYTFGIIDPHKHDFCESCNRIRLSAEGLLIPCLYF EDALSIKKAVKEGDIAAAAEILAKILANKPEKNRWQTDASNEISSRAFYETGG >gi|257443364|gb|ACYG01000009.1| GENE 134 139004 - 139363 653 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459148|ref|ZP_05624267.1| ## NR: gi|257459148|ref|ZP_05624267.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 119 1 119 119 194 100.0 1e-48 MDLNTIIILGLCVVIFLMFFVIYFKDKQADKKFERFDQVLTDAMQENYLLKKKVEELKEM IDSGGKVAPNIDINAIADVIDETIEQRLDVVPTMIDERVEKQIRPLLDQLKELIGSVRK >gi|257443364|gb|ACYG01000009.1| GENE 135 139373 - 140242 865 289 aa, chain - ## HITS:1 COG:Cj0164c KEGG:ns NR:ns ## COG: Cj0164c COG0382 # Protein_GI_number: 15791552 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Campylobacter jejuni # 3 276 7 279 294 303 60.0 3e-82 MAKFKEILSDINELIVFKHSVFALPFIFTAMITASKLQNGSVWFGWKLLFLGILCAVSAR SFAMALNRYLDEDIDRANPRCASRPSVDGRIGRGNLLLFIIANAVVFIAISALINPLALK LSMPILAALGGYSYFKRFSETAHLMLGFCLGLAPIAGAIAVSGTIPLWSVLLCFGVVFWV GGFDVLYSLQDMEFDRTAGLYSIPALYGKEASMFISKIFHAVAVLFWLLFCAAANLGFFA YLGVAACATILYFEHRIVRSDFSKIDRAFFTLNGYLGIAFFAFIFVNLF >gi|257443364|gb|ACYG01000009.1| GENE 136 140339 - 141244 682 301 aa, chain + ## HITS:1 COG:Cj0166 KEGG:ns NR:ns ## COG: Cj0166 COG0324 # Protein_GI_number: 15791553 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Campylobacter jejuni # 12 275 4 265 289 271 51.0 1e-72 MSQNQNSHASPQIAIIGTTASGKSDLALSIACEIGAVILSLDSLCIYRQIDIASAKPSEE QLREIRHFGVNLIYPNEYFSVGEFIKEYTAARAFAERSGAPLIITGGSGFYLKAMLSGLA PKVPNFKSEISNDEIYALARRIDPEFAAKFSASDSFRLKKWLSIYKFCGEAPSKFLRENT APPVISDIKIFEIDAPKQWLAQRIEARTKAMFERGLLEEAEFLFARYGAECRALGCIGLK ECGQLLRGQISRAQCEQLVSLHTIQLAKRQRTFNRSQFADKISAPPQELKRKILKLLRRE I >gi|257443364|gb|ACYG01000009.1| GENE 137 141393 - 141995 597 200 aa, chain - ## HITS:1 COG:no KEGG:TDE0554 NR:ns ## KEGG: TDE0554 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 2 194 3 199 209 111 32.0 2e-23 MFLGELSADGYGFALLDVRDLSEFLKERKCRAKKLLSYWDAHKQLFYDAVKGAKALPFYP LTVRSYEIFVCMDEEFAPPAGYEVAFKRDKLYFAPQSDSAILASFDALQHRFDKLKSGEL ELGYECQSGVAGKIRKFNSTLKLGLQSGTYELCALGLKNSSQNFEKYGYAFIFKRNASAE NQNFSRLDNDKFSFDICEGD >gi|257443364|gb|ACYG01000009.1| GENE 138 142050 - 143837 1861 595 aa, chain - ## HITS:1 COG:jhp1194 KEGG:ns NR:ns ## COG: jhp1194 COG1007 # Protein_GI_number: 15612259 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Helicobacter pylori J99 # 6 349 13 356 492 251 40.0 2e-66 MQNNLLNLASIAPMAILGGFALLMLAVSLFARTLSYKFYAVITILALALGFGLVFGYNSG IRGLFDVMLVDGIATLSMLIMLAGSIFFIFLSLGARSAHEYHTAEFFVLFLFVLVGYEFM VASESLMMILVGLETGSLALYTLIALHNRARSVEAALKYFIMGALGSGFFAFGAAMFFLS TGSMEISNIAQIAKSSNLQTSVLLFAACSFMIVSIGFKLSLIPFHTWTPDVYEGASSAMA GFMSVVPKIAGFVVAIRLFEALGSIGVQWLNIVLYVVAVVTMSLANLMALVQRDVKRMLA FSSVSHAGFVLCAIVIGSTQANAALFTYWILYAVANLGAFAFIWCVRQRRARSLNLKFKT QSVPLNLNANSEEKENFISNTKLSFSQNHELADSADELNLGGNGQNLACGERSFKASEQN SKENEQNFKASEPGAEATLFGTETCEPGAEICAQSSNFAARFEHQFEKFDGLICTHPLFA LCAAIFMLSLAGIPPFSVFWGKMYLLSAAVNSGYFALAVIMAVNSALALYYYLRLIVRMF LHEPREDAELDGSLSAVSVQIKFAVVLASVACVLAPFLVKFLTGAVNNFVFLSGY >gi|257443364|gb|ACYG01000009.1| GENE 139 143827 - 145356 1604 509 aa, chain - ## HITS:1 COG:mll1354 KEGG:ns NR:ns ## COG: mll1354 COG1008 # Protein_GI_number: 13471394 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Mesorhizobium loti # 5 477 7 481 501 345 43.0 1e-94 MEYFLSLVIFFPAVAAVLGFLIDEASIKTYAVTMSFIEFVLSLVLWILYEPVDGIAFSVL HPFISEYGINYFIGVDGISLFLVILSTLVTFLALLSLSIKERAKNLIICILFLEMTMVGV FVALDAILFYIFWELSLIPMLYIIGAWGSGKRIYAAVKFFIYTFLGSMFLLVGLVAMSYF YHEATGEYSFNILNWQSLSLPLGTQIPLFLAFSIAFAIKTPCFPFHTWLPYAHGQAPTIG SVLLAAVLLKMGTYGFVRFSLPLFPDASVYFSGMMCAVAIVMIVYASFIAFAQKDIKQVI AYSSIAHMGVIMLGIFSMSREGISGAVFLMISHGIVSGGLFMLVGFLYDRRHTKLFGEFG GLARVMPLYAFCFCVVLLGSIGLPLTIGFVGEFLSLVGIFKISFSYALLGGLGIIMGAIY SMNLYKKTFFGALVHEENKKLSDLNRTELCSIIPICVLVVVLGVAPNLMLKSIEPSVTQS LELMFNKASQTATRAYMEKANFKVRSDAK >gi|257443364|gb|ACYG01000009.1| GENE 140 145364 - 147211 1967 615 aa, chain - ## HITS:1 COG:Cj1568c KEGG:ns NR:ns ## COG: Cj1568c COG1009 # Protein_GI_number: 15792873 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Campylobacter jejuni # 10 613 6 594 596 554 57.0 1e-157 MLDTVFVWLLIALFAPLASAIFAGVFIRAKDKMFIGVICSALVILSTIASLALMELVSDN RLISVSLADFISTGFLDAKFSFLIDSVSAVMMVVVGIVSSVVHVYSIYYMWDDENFAKFF SFLGLFVFSMLVLVTSDNFLGLFIGWEGVGLCSWLLIGFWYDRSNYSWCANEAFIMNRIA DLGMLLGIFLIYLSFGSLRYEVVFANAAGLEPEILTLIAALLFIGAMGKSAQFPFHTWLA DAMAGPTPVSALIHAATMVTAGVYLVVRANSIFALAPEVSGFIVCLGAFVAVFAASMALV HNDLKKIIAYSTLSQLGYMFVAAGFGAYWIALFHLATHAFFKALLFLGAGNVMHAMKDDL NIQNMGGLYKFMRPTAILMCIGSLALCGFYPFAGFFSKDKILEAAWSADAYFIWALLFAG AAMTTFYSVRLIMLVFFGKAKYSHHPHEAKGFALIAMGVLAVPAVIAGFFEHDFAEFVLS ILPGFKISIPHGVEVILIALTLAMISAVAIGTIWTYGKGKFSLNLKNCKFYKILIAQYFI PQIYERVIVRGYERLSEICAKCDGAIIDASVDLIARVAVKSGEGADRVSNSGDLSANLRW MVLGSFILLILAFAL >gi|257443364|gb|ACYG01000009.1| GENE 141 147204 - 147527 388 107 aa, chain - ## HITS:1 COG:jhp1191 KEGG:ns NR:ns ## COG: jhp1191 COG0713 # Protein_GI_number: 15612256 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Helicobacter pylori J99 # 1 98 2 99 100 108 57.0 2e-24 MGLNHYLIVAAMMFGLGLAGMMKRRNLIMLFFSSEILLNAANLALVAVAKFYDNINGEIF ALFIVAIAASEMAVGLGLLILWYKKTGSIELDSFVNFKNPSKDGPDA >gi|257443364|gb|ACYG01000009.1| GENE 142 147529 - 148056 799 175 aa, chain - ## HITS:1 COG:Cj1570c KEGG:ns NR:ns ## COG: Cj1570c COG0839 # Protein_GI_number: 15792875 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Campylobacter jejuni # 1 164 1 167 172 125 52.0 3e-29 MIQTLAFYFFSAVCLALFGISVFSKNVLYALSALAGGMVFMSGFFFLLDAEFLGVVQIIV YTGAVIVLYGFALMFLGADKNVNEPKKGARLFFALSGVIAFLLVIIALGAVVANNVETLK ILNTDDTEALGMIIFTKYLAIFELAAVMLLVAMICAIVLAHKQMDASLTYEESEG >gi|257443364|gb|ACYG01000009.1| GENE 143 148053 - 149258 1360 401 aa, chain - ## HITS:1 COG:Cj1571c KEGG:ns NR:ns ## COG: Cj1571c COG1143 # Protein_GI_number: 15792876 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Campylobacter jejuni # 1 195 1 193 213 213 55.0 5e-55 MARYVQIDKRAPIKSGGDKLRRFLARTFNGELFVGLWVVLKNMFKRGGSHTLRYPMEKFV MPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCIAMETSLGSDGRKKVDNYSINLGR CVYCGLCADVCPEIAIVHGCEYELASEQRAYYGFKEDLLIRGENLCLNGAAQEFAGYGSL DENAGARIKVTPNAYIKSDAASDEPNLKNADLNLKSAAESSKKEGAASDKILFSGAGLSG EILAERQDAEQASLRESSAADAENSKENSADAENSTLDSQRNSKENSASQSAEDSVTDSK NFAENSKESSVASHAENSVGDSTENFKNNSATNDDSSENSKENSVPQDAGNSAARGKKSK ANSKKNSTEGAENSTLDSARNSKENSASQCAEDSAAQGEEQ >gi|257443364|gb|ACYG01000009.1| GENE 144 149269 - 150264 1399 331 aa, chain - ## HITS:1 COG:Cj1572c KEGG:ns NR:ns ## COG: Cj1572c COG1005 # Protein_GI_number: 15792877 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Campylobacter jejuni # 1 331 1 331 332 369 59.0 1e-102 MSDSAFYFVATVLKALVILAVIALLSGLATYAERKVLAYMQRRIGPSMVGPAGLLQVGAD MIKLFTKEDAIPARANKLLFKIAPIISATGAFVALSVVPLLPEFTIGGRTIQPILSDINV GILFLLGASGTCVYGLLIGGLASYNKWGTIGAFRAFLQITCFEVINGLSLIPIVMITGSL SLIDIVSAQSGGIDKWFIWKEPVCFALFLIAAFVECNRTPLCLTENETEIVAGAGTAYSG MRWGMFFIGEYANIITYSVATTLLFLGGFNAFWFIPGGIMMVLKSSLVFFCFLWARAAWP HLRPDQLMGLCWKVCMPLALACVLITALAIV >gi|257443364|gb|ACYG01000009.1| GENE 145 150261 - 152966 3066 901 aa, chain - ## HITS:1 COG:Cj1573c KEGG:ns NR:ns ## COG: Cj1573c COG1034 # Protein_GI_number: 15792878 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Campylobacter jejuni # 4 789 3 771 820 721 50.0 0 MAKITIDGKACECDEGEYILQVARRCGVFIPALCYLSGGTPTLACRLCMVEADGKRVYSC NAKAKDGMVVYSRSPEIDAEREAITQVYCINHPMACGVCDQSGECELQNLAHLMRTNTQS YAIRDTAREVQDWGYLSYDPSLCIVCERCITAAKDRLGVDAFKLVPRGGDALSKEQKDAM PKDAYAVWNKLQKSLIARVNDEDDCVNYGESEAVCPTGALVESAFKYVSNAWELRQIPAS NPHSSDCELLYYEIKRRGIGEPREKIYRVSSDINFSVLHAGARFGWDFSNEQASKNEAVF SRIVRGIEDGEIKNIKFNSFITNEEARILELLRQKFKLALINNEAFAYQKFLREFSKFSG TKFYNADSQTIKNSDFIVVCGTFLRSDAPNLGYAVNSACKLNKASGIYFHPFCDEGIKGF GKNFIHQPHAAGLEAQILLWILQKFGRDLPGWLDAKLAAEFEISRAAAKQNLDEKSADSQ NPENSTEANGAENVASESGAKNSASADGAENPAKNSAQNSENPAESKISNFARTLGLDEQ KVDELLAKKESFSLIIGEDFIRTPNSATLARLAGLVQRYTPLKVLVVPPRTNSLGVALIC ELSAQMSAGETLGYNEAGNISFGVLEADLDAPSLVQQEGTFTNYDKRVVPTNAALDYGGY ELNDIACALGVCAEHAISYTSSLGADFEPIKFDDLENFYDNGGANHRGYGLRNEELAASE EEFEISLSAPISAGEGEILIYEANPLHQFNKFSGASSALGEAGALYLSPSIAESLGVSAG DVVKIYQADDAGHNEKTSGAGKTGVASNESDKGGAGRAKKADRASGARKANAFGDENGES GATGLVNLKREIVASVKIDPGFSGAYLPYFDEKLRGEIFFKTSRYAGVKIEKISNSKGEG R >gi|257443364|gb|ACYG01000009.1| GENE 146 152968 - 153675 592 235 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0186 NR:ns ## KEGG: CHAB381_0186 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: Oxidative phosphorylation [PATH:cha00190]; Metabolic pathways [PATH:cha01100] # 1 235 1 221 221 180 43.0 3e-44 MKILNFAPLLRLQSPGLTEGFKHAKILSVSPLQDPYLESELIKCEIGAQNFVLALICASF CDEPYFADLDLEYLNGESNVGEEEIEQICEFLRGGCDALLIDDALIKTHPDAENIKAFLS LIAAEFGVKILSLRGEQVELAAPHAVNLSPLKEPMNFDGAVVFKHDADDRLVGGRYFSMV AKIKYGDRVRIKTPHLNLEKEFIQDGWINGAIALLGSGGRGFSGYNFELAEISKV >gi|257443364|gb|ACYG01000009.1| GENE 147 153672 - 153902 263 76 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0185 NR:ns ## KEGG: CHAB381_0185 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: Oxidative phosphorylation [PATH:cha00190]; Metabolic pathways [PATH:cha01100] # 1 76 1 76 76 116 73.0 4e-25 MKRYDLRHLGDKFLNRMGEILKNSARGETMIFMFEMGDFSAVQKSADLVEGLNSTLLSSI RYNQVDWMIVAKKGRI >gi|257443364|gb|ACYG01000009.1| GENE 148 153899 - 155125 1418 408 aa, chain - ## HITS:1 COG:Cj1576c KEGG:ns NR:ns ## COG: Cj1576c COG0649 # Protein_GI_number: 15792881 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Campylobacter jejuni # 1 408 1 408 408 640 69.0 0 MQNPNKLRPFFENIEYEREGANMILNFGPQHPSAHGQLKLVLELDGERIVRARPGVGYMH RGIEKMAENMIYAEFVPVTDRIDYVASGSNNYGFCAAVEKLCGIEVPRRAQIIRTILLEL NRISSHLLFLGTHALDIGAMTVFLYCFRSREYILDLIEKYCGARLTHNNIKIGGVFLDLP NGWLEEMLKFCDEFPSDIKEFEDMLDTNRIWLMRTEGVGVISHEDALSCGCSGVTLRASG HAWDIRKEEPYLIYDELDFDVPYASEGDCYARYKCYMAEMRESLKILRQCAKHYPLSDPQ ILAIDPAYVNPSKEQIMTQNYSLMQHFVLVTQGLRPPVGEIYAASESPKGELGFYIRSMG QSRPYRLKIRTPSFWHCAVYEEILPGQYLADAAAIIGSTNIILGEVDR >gi|257443364|gb|ACYG01000009.1| GENE 149 155125 - 155913 832 262 aa, chain - ## HITS:1 COG:Cj1577c KEGG:ns NR:ns ## COG: Cj1577c COG0852 # Protein_GI_number: 15792882 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 27 kD subunit # Organism: Campylobacter jejuni # 1 262 2 264 264 272 52.0 4e-73 MRKFNPKGDQSKKNYYKDRFFIPEETPKSSANESDFKDDLDALEGVQILNSYVEFNTLVL YVEPAQNLAALRALKGAGYEILCELSGVDFTEARGGIEVFYQLLDIKRARRARLKCFVPN ESFLQSAAGIYKSANWAERELYDMMGVWIEAHPNLARLIMPDDWFGHPLLKSYPLQGDEF AKWYEVDKIFGVGARERIGEENRNSAFVDEKDTFNFARLYHEGARGEPRPQEKILQEYQE EGGVRFVKRAKRGIYKIITKRK >gi|257443364|gb|ACYG01000009.1| GENE 150 155913 - 156422 739 169 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175216|ref|YP_001407461.1| NADH dehydrogenase subunit B [Campylobacter curvus 525.92] # 1 168 1 168 170 289 79 8e-77 MAEHKINYARENGLPVVLTTVDKLIAWGRSNSLWAMTYGLACCAIEMMAAGAGRFDFDRF GTIFRASAKQSDVMIIAGTLSKKHAEFTRRLYDAMPEPKWVISMGSCANTGGMFNTYATV QGCDRIVPVDIYLPGCAPRPETLQFAMMVLQKKIRTQTPRRAQKAKRLI >gi|257443364|gb|ACYG01000009.1| GENE 151 156404 - 156793 441 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175415|ref|YP_001407462.1| NADH dehydrogenase subunit A [Campylobacter curvus 525.92] # 1 129 1 129 129 174 62 3e-42 MSRIPLQSPYFGIFVMLILAFCVFSLIVKLSSLVGSRLADRRDERLKGEIYESGPEAVKQ PNRMNSHFFLIAVLFILFDVEIIFMFPWAVNFKILGVFGLVEMAFFIVLLGIGFIYAWKK GALNWQSIR >gi|257443364|gb|ACYG01000009.1| GENE 152 156967 - 158529 1708 520 aa, chain + ## HITS:1 COG:MT2339 KEGG:ns NR:ns ## COG: MT2339 COG0306 # Protein_GI_number: 15841772 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Mycobacterium tuberculosis CDC1551 # 8 520 40 552 552 540 56.0 1e-153 MKSSKISLIFYGIFCGVTIYFLIWGFGFIGSGDKMLFLVSVFLGIFMAFNIGGNDVANSF GTSVGSGTLSIAQALCIAAVFEASGAVIAGGEVTSTIRSGIIDLSKMDVHPRDFIYVMMS ALFAAGAWLLFASRKGLPVSTTHAIIGGIVGSGLTLGALLNTAETSALWLVQWDKIGKIA ISWVLSPILGGVISFGIFWLIKHYILDYNRYAQIKIDRIKREKKSLRKLHKKTFETLDDI QKIAYAEALNHDIYAMRDPDFDPSELDSEYYKKVIELDAKKEKLKSHKALEYGIPAVAGI GAFVISAMLIFKGLHNLNFGLTNFYNYLIIGMSTLITWLLMFIFAKTLRRSNLNKSAFLM FSWLQVLTASGFAFSHGSNDIANAVGPFAAIIDTMATNSINPSTPVPQQIMIMFAVALIA GLWFIGKEVIATVGTNLTKIHPASGFSAELASAVVVMAASVLGLPISSTHVLIGAILGIG LVNHSTNWSLMKPIGLAWIITLPVSALLSAFAFVLLRHVF >gi|257443364|gb|ACYG01000009.1| GENE 153 158751 - 159509 820 252 aa, chain + ## HITS:1 COG:jhp1251 KEGG:ns NR:ns ## COG: jhp1251 COG1296 # Protein_GI_number: 15612316 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Helicobacter pylori J99 # 5 235 10 227 228 121 34.0 2e-27 MSKFEIFRPTLAVMMGYVPLGLAFGIYGISQDLPVWALALTSLLIYAGSVEFVLIAFIVT HASLVDTFVVAFLLNFRHFFYTMSLLDELRFVRHKIYAVYALTDETFALLKARAFLRPEE LSGEQPVTPQRLKELDLLYNLTAVLNQSYWVAGVVAGAVLGASLKLDFSGVEFSLTALFA MLTYEVFKANPQYKVLLLGFACAFAGLFIFPTKYFLFGTLIFGTAVLLLFRKYFERPSRT GRRLRKFLKRGR >gi|257443364|gb|ACYG01000009.1| GENE 154 159509 - 159856 366 115 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_0941 NR:ns ## KEGG: CFF8240_0941 # Name: not_defined # Def: branched-chain amino acid transport protein AzlD # Organism: C.fetus # Pathway: not_defined # 1 112 1 103 103 65 46.0 6e-10 MEILPYIFLASLATILTRFLPLLLFKKKTASPSLSYLQKNSGLLIMVVLTIYALKTMLPS FSGERAFSADVLQTAMLLFCLIMAFVVHAKFRNSLVTIALPTLIYMAALRFLLNY >gi|257443364|gb|ACYG01000009.1| GENE 155 159926 - 161278 1489 450 aa, chain + ## HITS:1 COG:Cj0363c KEGG:ns NR:ns ## COG: Cj0363c COG0635 # Protein_GI_number: 15791730 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Campylobacter jejuni # 7 436 3 432 448 468 54.0 1e-132 MNFISQMVHSFAKKYAADTMQKSLYNSLRIDITQENIAKIPNPDKKYMLYMHVPFCHTFC PYCSFHKYAYERGACKAYFSALRTEMQRTKDAGYDFETLYVGGGTTLIDEDELARTLELA KSLFSIKEVSCESDPNHIEPESLLRFRGLIDRLSVGVQSFDDDILRKASRYEKFGSGEIL QEKLSRAVGILPILSLDLIFNFPFQTREILLRDIEAAKAVKPEQITLYPLMKSPLMRDQI ARSLGVSNVDHEEEFYSIICKEFSSWHRSNAWAFAREKSNINDEYVGTNHEYVGIGSGAF SFLDGRLLVNAFNLEDYASRVRKNESTVIATCDFSRSERAKYLFLTELFNGEIDITKFNA ANDLNLRRELGRELSLLRLAGAVWIEGEIIRTTEFGAYLCLVLMKEFYTGMDKVRAAFRD DAKIKRAKQLIIMDESESAAAGVAKSEIAS >gi|257443364|gb|ACYG01000009.1| GENE 156 161392 - 161745 292 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459171|ref|ZP_05624290.1| ## NR: gi|257459171|ref|ZP_05624290.1| hypothetical protein CAMGR0001_2693 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2693 [Campylobacter gracilis RM3268] # 1 117 1 117 117 190 100.0 2e-47 MKRRMIKLFILFLFFVLIFELVGNLFNFGRFPFHKSCEPFMMINRYDSGRPNDECIMQLM DENRTGDLFLYYFKTKYNHEEPLSELDEKAIKFLNIPNSKIITVNKDGVEKKFLIRD >gi|257443364|gb|ACYG01000009.1| GENE 157 161836 - 162111 479 91 aa, chain + ## HITS:1 COG:no KEGG:PSEEN1732 NR:ns ## KEGG: PSEEN1732 # Name: not_defined # Def: hypothetical protein # Organism: P.entomophila # Pathway: not_defined # 1 89 1 90 98 75 42.0 7e-13 MNNLKLIQNWYASKCDGEWEHEYGLTLETVDNPGWWIEIDGESGKKPIKINIDRDDEDWF FINATENELKGSCGAENLEELLEYVVKWLMD >gi|257443364|gb|ACYG01000009.1| GENE 158 162141 - 162704 475 187 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459173|ref|ZP_05624292.1| ## NR: gi|257459173|ref|ZP_05624292.1| hypothetical protein CAMGR0001_2695 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2695 [Campylobacter gracilis RM3268] # 1 187 1 187 187 345 100.0 1e-93 MIEVETKNESCKNTEVTLANIEIVKDAVKEFAYKSFKGSYLFFDIYGEMDRDFCVLGAIG EGDENNIGKIDLKKYERSSVGATDISQDIKGAKFCTFFKLDQSEILKQILYYIAYERFES GYYAKGKFIGKNSDDLVFIGICGDVKNCAEIKSVDLDEIIKSLPKLSESNNFYISEFICD QPNRSMR >gi|257443364|gb|ACYG01000009.1| GENE 159 162746 - 163378 689 210 aa, chain + ## HITS:1 COG:no KEGG:HH0199 NR:ns ## KEGG: HH0199 # Name: not_defined # Def: hypothetical protein # Organism: H.hepaticus # Pathway: not_defined # 1 210 1 252 267 91 31.0 2e-17 MKFKILKPNELYGWVFNKDEELYKALGFDCWMDSFIRILAQIPGARKKDILDYIEYEIFD WYEWFELYGIIQSDYKLADEDNPEISAYPTYAGEYFGVMGQLFLGGMIDFGIEGENLRKE WADFDTNLSKIDLGMSLYEKWIYFRDNFFFGYKFLEEENITPKAEITWKNPDTWSRFSHW MCMTKAGKEYRDKILKPRLYEKYKDVVIEV >gi|257443364|gb|ACYG01000009.1| GENE 160 163541 - 164116 338 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459176|ref|ZP_05624295.1| ## NR: gi|257459176|ref|ZP_05624295.1| putative adenylate kinase [Campylobacter gracilis RM3268] putative adenylate kinase [Campylobacter gracilis RM3268] # 1 178 1 178 191 331 100.0 1e-89 MSTRIGLILLGAFFVFESILGCFSGKMYFKYGGWSAVEPVYVIKIFIIGLLFVSAGIFIN KKIGKVINALIGLGLLIISIEIFTTGDPAGIQSKIGYPFLISGFSVLLISILFFYLAFRS EKSIKRYPKYMWCKDCFKFYLYEDVKDTDQICSYCGKKLTEYKNDGVYQQRNASEQSTKS PKPKKRKFKKR >gi|257443364|gb|ACYG01000009.1| GENE 161 164547 - 165278 1011 243 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1482 NR:ns ## KEGG: CCV52592_1482 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 243 1 251 251 214 51.0 2e-54 MKKFMILLAAAALSLAHADVTDILKQGADALGATRSGNYKDLLASATNRAASELAKGYIH SKTAKIELPPSLKAAAKLARKVGGDKWERELVVSMNDAATKAVSGASKIFLQDLKSMSDA DVKKLIGGGDTALSEYLQSKSGAKLRAVFRPIVSDMMSKNSFATAYNGLNSFAQSKIAGN EAVQNIARGLGASEYLPKQGEDLNDYITQKTLDGLFAVMREKESALRGSAVGKGAGILGK VIK >gi|257443364|gb|ACYG01000009.1| GENE 162 165573 - 165794 89 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459181|ref|ZP_05624300.1| ## NR: gi|257459181|ref|ZP_05624300.1| hypothetical protein CAMGR0001_2703 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2703 [Campylobacter gracilis RM3268] # 1 73 1 73 73 117 100.0 3e-25 MRCWIKAWYKLNSLYFVKSGSSLLNLSSLIYGELFGCGGLDKISIVCAEDIAAHRYNCFM CPALASFALRRFK >gi|257443364|gb|ACYG01000009.1| GENE 163 165766 - 167124 1502 452 aa, chain - ## HITS:1 COG:jhp1001 KEGG:ns NR:ns ## COG: jhp1001 COG0334 # Protein_GI_number: 15612066 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Helicobacter pylori J99 # 4 451 2 448 448 549 60.0 1e-156 MKSYIDGLLLNLKRANPGQEVFIQASTEILYSLIPLLKRDERYVKNKILERILAPERTMM FRVVYMSDGGEPCVHTGYRIEFNSALGPYKGGLRFHPSVNLGVLKFLGFEQIFKNSLTGL NIGGAKGGANFDTKGKSDGEIMRFCQAFMLELHRLISSNTDVPAGDIGVGGREIGYMYGA YKKLTRRFDGALTGKGLSWGGSLARTEATGYGSVYFANEMLATRGDSLHGKICTISGAGN VAIYTAEKLYQMQAKPVTVSDSTGFIYDAEGIDVALLKKLKEQLRVGLCEYIKERPNAKF IPVSAYPAGRNGVWSVPCDAAFPSATQNELNLQDVKTLYANGCRMVCEGANMPSTLEAID FMLAQKDFLFGPAKAANAGGVATSGLEMAQNAQMASWSFEEVDSKLREIMRHIFRTSYET SKEFGAEGNLVLGSNIAGFRRVADAMLDQGLV >gi|257443364|gb|ACYG01000009.1| GENE 164 167121 - 167813 684 230 aa, chain - ## HITS:1 COG:Cj1285c KEGG:ns NR:ns ## COG: Cj1285c COG1427 # Protein_GI_number: 15792608 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Campylobacter jejuni # 1 222 1 222 223 207 51.0 1e-53 MLLGKIDYLNLLPFHVFLKSLPLPSYVKKSIEFKKGVPSKLCADLYYRRIDAAVISSIES RRAKYRKLPLGIVAKREVLSVLVRKNSAPRLDPASMSSNMLARVLDLSGEVLIGDNALKA LLSQGRDKFYDLGEIWQQRTGLPFVFGRLCCVKNEKAYARLATKFLRSRIKIPRYILQSY ALSRGIKEREILNYLKFIGYEIGVREELALKKFIAKAKKLKFNPVQKEKL >gi|257443364|gb|ACYG01000009.1| GENE 165 167892 - 168263 525 123 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1000 NR:ns ## KEGG: CCV52592_1000 # Name: not_defined # Def: NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.-) # Organism: C.curvus # Pathway: not_defined # 1 111 1 103 115 63 41.0 3e-09 MFKVLSCAALALVLLGCGSNQLRQSPDSAMNKQAQSEKTITQENAKTFYFVDDKGKKLSL SSNDDFNTAVLKDDSGKSYDLKRERAADGIYMENKDGVSIHFKKGEGIVEFSKYKSIPIT EVK >gi|257443364|gb|ACYG01000009.1| GENE 166 168256 - 169704 1359 482 aa, chain - ## HITS:1 COG:CAC1002 KEGG:ns NR:ns ## COG: CAC1002 COG1488 # Protein_GI_number: 15894289 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 2 472 13 486 493 481 49.0 1e-135 MKDLALLTDFYQLSMMQGYFFTKPDQTAVFDVFYRKNPSGGGYAIFCGLNEVVDYIENLK FSDDDIAYLKSLNFFKPEFLEFLRGFKFSGEIYAMDEGQIVFPHEPLIRVKANIMEAQLI ETAILNTINFQTLIATKSSRINFSAKGDSVMEFGLRRAQGRSAGIYGAKAAIIGGCSATS NVLAANKFGVPAIGTHSHSWIQSFDSELEAFRAYAKIYPNSTLLLVDTYDTLASGVPNAI TIFKELRASGHEPLGIRIDSGDLEYLTKQARKMLDAAGFENAKITASNDLDEYAIDQLKL FDAKIDSWGIGTRLITGGDSSSLGGVYKLSGIEKDGEIIAKIKISNDPRKINNPGYKQVF RLYDKDNGMALADLITLDGESIDESAPLEIFHPLYTYKRKILTNFSAHKLLRPVFKEGKF VGVRRTVSEIARFSKEQKSKFWLEHLRNVHPQSYKVDLSQRLWDIRKSLINECNLNLKEK YV >gi|257443364|gb|ACYG01000009.1| GENE 167 169750 - 171006 1619 418 aa, chain - ## HITS:1 COG:CC3549_1 KEGG:ns NR:ns ## COG: CC3549_1 COG0281 # Protein_GI_number: 16127779 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Caulobacter vibrioides # 11 416 24 432 453 448 56.0 1e-125 MAKVNVEAALKYHIGGKIGTNVKTPCATAEDLALAYTPGVAEPCKVIEGDHEAAFKYTNK ANLVAVITNGTAVLGLGDIGAIAGKPVMEGKAVLFKKFGGVDAFDIEIDEKDPKKIIEIC KALAPTFGGINLEDIKAPECFEIERELQKAVDIPVMHDDQHGTAMITGAGLINAALISGK KIEDMKIVVSGSGAAGIACAKMYQNLGAKHIIMLDSKGVIHKGRTDLTEQKKEFALDTAD RTLEDAMKGADMFLGLSKPGVLTKEMVKTMAPHPIIFALANPVPEIYPSEVEEVRNDAIV GTGRSDFANQINNVLGFPYIFRGALDVRAKKITENMKIAAARAMADLAREEVPAEIRKML GKDNLKFSKDYVIPNPFDPRVFAVISTAVAKAAVDDGVARVKEFDAATYKKNLEAKKL >gi|257443364|gb|ACYG01000009.1| GENE 168 171008 - 172387 1275 459 aa, chain - ## HITS:1 COG:Cj1288c KEGG:ns NR:ns ## COG: Cj1288c COG0008 # Protein_GI_number: 15792611 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Campylobacter jejuni # 2 456 5 459 463 658 69.0 0 MIVTRFAPSPTGYLHIGGLRTALFSYLYARANGGKFLLRIEDTDLKRNSQEAAKAIEEAF KWCNLDYDGQIVYQSSRFDLYKQYVQKLLDEGKAYKCYMSKDELDELRAQQEARKERPRY DNRYRDFTGTPPAGIEPVIRIKSPLSGTIEFNDGIKGEIKFNAADILDDFIIARSDGTPT YNFTVVIDDALMGVTDVIRGDDHLSNTPKQIVLYNALGFKIPKFYHVAMINGADGSKLSK RHGATDVMEYKRMGYLPQALLNFLVRLGWSHGDDEIFSMEEMKRYFDPNHISKSASTFNQ TKLEWLNAHYIKNSDDDELAIQLVEFGVDIRSHAKKHLIAQQYKQRAKTLVEMAEGIKVL LNRPSCYDEKAYKKFVTESSLSLLTKFADTLSANLNAKECEKRTMEFLDANGAKLKDLAQ PLRVAITGGSVSPSIFEICEILGSDEVKTRISNLIKKGL >gi|257443364|gb|ACYG01000009.1| GENE 169 172472 - 173362 849 296 aa, chain + ## HITS:1 COG:Cj1289 KEGG:ns NR:ns ## COG: Cj1289 COG0760 # Protein_GI_number: 15792612 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Campylobacter jejuni # 2 274 1 270 271 141 30.0 1e-33 MIKKLLFSAMICAVCANAEVVNGVIAVVDDEPITGYELARVQKLTGASPQAAMEILIGQK LQQSEIKRRGIAVNDAEIDARLKAIADQNKLSLDQLKTAVQKQGINYDDFKANVRRTLLE EKLYGSIFADVQHRTTPENVKKFYSQNSSLFTTFDSITLTRYIAKSQAPLDRIRTNPKLR PSDVYVMKGTLKANQMDEGLKYIVTNVEQGKFSPIIPTRNGYEMFYVNDKKGLRTLDFDS VQDKAIEGYVTSERKKAITEFNDRLRSNANIRIIERPQAKAQGAKTAPKVKVQKRQ >gi|257443364|gb|ACYG01000009.1| GENE 170 173479 - 174117 481 212 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459189|ref|ZP_05624308.1| ## NR: gi|257459189|ref|ZP_05624308.1| hypothetical protein CAMGR0001_2711 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2711 [Campylobacter gracilis RM3268] # 1 212 1 212 212 419 100.0 1e-116 MIVINYFTELKSDPRSGGISATSFDTSKFYFDVDTVTKLIAVWSDETGGEELNFKIYDFD RKLKFCLREPIIYAKFEPRAHQIWLARRDGELKSNLALPDKLGNSDVWMDELPQIGGMAV DLGAGQDGSRSFLLHADGSELNLIAELEEDFSFLFATEGKGGYNDELEQKCAPYRECKDE QNSELKRRQERMQKPEQERENNQKCERAKRCF >gi|257443364|gb|ACYG01000009.1| GENE 171 174090 - 174506 394 138 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459190|ref|ZP_05624309.1| ## NR: gi|257459190|ref|ZP_05624309.1| hypothetical protein CAMGR0001_2712 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2712 [Campylobacter gracilis RM3268] # 19 138 1 120 120 243 99.0 2e-63 MRASEAVLLNFYQGRIAIVSYPQLEPLRKFRFPEELTLDGKTREFMLGGIVLINEKIWLV RDDGYFRHYLFDAHKFEFIAEIALAGFEPKAGSLGEIASSICDIDCRDGKLIFTHYELAG DGEQTREINRFLRRTPQR >gi|257443364|gb|ACYG01000009.1| GENE 172 174553 - 175140 408 195 aa, chain - ## HITS:1 COG:no KEGG:TDE0543 NR:ns ## KEGG: TDE0543 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 8 187 3 198 215 80 28.0 3e-14 MLLGKGAVKYYRVSGVDNNACFYGDDKELLKFCSKCKLIVNRYEAAMAAAETFVLKKRCD YSSCWDGETVVSQRFVDTYNKYSLSGLSFIKLPRSKNFYLLQCNIEVRYDYGNNPNLVRR QLCTECGQYREVSCVLPIKILDEDRLKNNTFYKTDLIVGGVVGRWPLLLATDDIPHIFQV EKIKDIYFKLCNKNG >gi|257443364|gb|ACYG01000009.1| GENE 173 175527 - 178790 4475 1087 aa, chain - ## HITS:1 COG:Cj0279 KEGG:ns NR:ns ## COG: Cj0279 COG0458 # Protein_GI_number: 15791649 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Campylobacter jejuni # 1 1084 1 1087 1089 1615 73.0 0 MPKRDDIKTILLIGSGPIVIGQACEFDYSGTQAAKTLKSLGYRVVLINSNPATIMTDPDF ADATYIEPITKESILRIIKREGVDAILPTMGGQVALNVAMQAYESGELAGVKFLGANPEA IKKGEDRVKFKEAMIKIGMDLPKSKYAYNIEEAMAAANEIGFPLIIRASYTLGGAGSGVA YNIDEFKEVAQNGLDVSPINEILIEESLLGWKEFEMEVIRDHKDNCIIVCSIENFDPMGV HTGDSITVAPALTLTDKEYQAMRDASFKILREIGVDTGGSNVQFAVNPQTGRMIVIEMNP RVSRSSALASKATGYPIAKVATMLAVGFSLDEIKNDITGTPASFEPVIDYIVTKIPRFAF EKFPGANPYLGTAMKSIGEVMAIGRSFKESIQKALCSLEKGYFGFVELNLSEKDLIFGLR NAQQDRALYIAQGFRAGMSVDQIYELSKIDCWFLSQIEQIVKFEERIDMEIINDAALLRQ AKSWGFSDKMIANLINKKDNLGLTQNDIHFACARQGIDLEYNEVDTCAGEFAALTPYLYS STNITPAIASRKISKDNKKVLIIGGGPNRIGQGIEFDYCCVHASYALRDMGITTIMYNCN PETVSTDYDTSDILYFEPIDFEHVRAVIEAENPDGVIVHFGGQTPLKLAKRLSTVGAKII GTSARTIDVAEDRKKFSEFIVNIGVKQPKNDTAVSEAEAIEKAAAIGYPVLVRPSYVLGG RAMRRVHSEAELRLYMSEAVSVSHHSPVLIDKFLLDATELDVDAICDGRDVYIGAIMEHI EEAGIHSGDSASILPPLSLSAEMIDLVSRQTKEIALNLGVVGLMNIQFAIFENELYIIEV NPRASRTVPFVSKATGIPMAKVATRVMWQGGLREALKFYDEFGVLIEEKGILKPRIKNHI CVKESVFPFNKLAGADLILGPEMKSTGEVMGIGESFAKSFAKSQIGASNALPSGGKVFLS LADHDKPRAVELARAFTSAGFSIAATSGTYKLLGENGVECEFVYKISEGRPNIEDKLKNG EISLVINTSDSKSNSTDAAKIRQSVLRFRLPYFTTMKAAIAATRSICSIKDESVLEVKTL QEYLSGR >gi|257443364|gb|ACYG01000009.1| GENE 174 178790 - 179539 778 249 aa, chain - ## HITS:1 COG:Cj0277 KEGG:ns NR:ns ## COG: Cj0277 COG1792 # Protein_GI_number: 15791648 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Campylobacter jejuni # 7 245 8 246 249 198 41.0 7e-51 MTNLKLLLVAVLLVAVSLTFGSYIHGKFIGFAGGILEVYYGVSDRVKSAVSEHFNQAETI KALREENAELKKSAMLLSTFAGELNKILIDKNSSVYEPKVQLVKALSYANLNDYNKFFVN FENFNPNKIYGLISEGKTAGILVNKDGRPLAILQRDEKSNFSVFIGDTQIPGVAGGENNE LVVRYIPQWLDPKVGDEVFTSGKDEIFFAGVPVGKVKEIQNGKLYKSAVVEPYVSSEMPA FLYVVTKEN >gi|257443364|gb|ACYG01000009.1| GENE 175 179532 - 180566 1278 344 aa, chain - ## HITS:1 COG:Cj0276 KEGG:ns NR:ns ## COG: Cj0276 COG1077 # Protein_GI_number: 15791647 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Campylobacter jejuni # 1 344 1 345 346 478 74.0 1e-135 MLLDSILGLFSRDMGIDLGTANTLVLLKDKGIIINEPSVVAVQNERYGKQRIIAVGAEAK EMLGRTPGDIEAVRPMKDGVIADFDMTEKMIRYFIEKTHKRRFFVSPRIIISVPYGLTQV ERKAVRESAMIAGAREVYLIEEPMAAAIGAGLPVNEARGSLVVDIGGGTTEIGVISLGGI ISAKSVRVAGDKIDASIVNYVKEKYSLLISERAAEEIKIKIGTAVQQQKDLTYTVKGKDQ ISGLLSSVDLTSEDVREAIKDSIREIADALKFVLESIQPEVAADIVENGVVLTGGGALIR GLDKYLSDTVKLPVFVADEPLLCVANGTGKALEEIKSLKQAAND >gi|257443364|gb|ACYG01000009.1| GENE 176 180576 - 181814 260 412 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 156 397 258 448 466 104 31 3e-21 MANKCSFCGETGADGRRIYPNDDGTAAICSYCIDMAYAAIHGSEGQNEAIQNQNKEIDFE AIKPKALMEVLNRYVIGQERAKKIFSVGVYNHYKRIFRQTDAKGDDTEISKSNILLIGPT GSGKTLMAQTLAKFLDVPIAISDATSLTEAGYVGEDVENILTRLLQAADGDVEKAQRGIV FVDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSVVNIPPKGGRKHPNQDFIQIDTT NILFVCGGAFDGLNEIINRRIGQNVLGFNQTKRSKKESLNLLNMVEADDLVHYGIIPELI GRLHIVATLNEIDEKAMVRILTEPKNAILKQYQKLFAIDGANLKFDDDALREVASLAIKR KTGARGLRSIIEEIMIDIMFDLPELKGYDVIISKEVVDGVSKPILVKQNLTA >gi|257443364|gb|ACYG01000009.1| GENE 177 181814 - 182602 839 262 aa, chain - ## HITS:1 COG:Cj0274 KEGG:ns NR:ns ## COG: Cj0274 COG1043 # Protein_GI_number: 15791645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Campylobacter jejuni # 1 261 1 260 263 369 67.0 1e-102 MAKVHHTAIIEDGAQIGAEVVIEPYAFISAQAKIADGCTIKQGARIIGDTQIGENSKIFS YAIVGEIPQDMSFEDGERTGLVIGKNATIHEFCTISSGSHKGDGFTRIGDNLFMMAYCHI AHDCVLGSNIILANNATLAGHVVMGDYAVIGGLTPVHQFVRIGESCMIAGASALSQDVVP FCLAEGNRAYIRGLNLTGIRRRFDKETVETINRAYKFLFNQGGGLKEQAQILLNETSDQN VRKMCEFIINTKRGIPLDKGKI >gi|257443364|gb|ACYG01000009.1| GENE 178 182602 - 183051 605 149 aa, chain - ## HITS:1 COG:Cj0273 KEGG:ns NR:ns ## COG: Cj0273 COG0764 # Protein_GI_number: 15791644 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Campylobacter jejuni # 1 149 1 146 146 192 59.0 2e-49 MIDINEILSILPHRFPFLLIDRVEELSIGESIKAYKNVTYNEQIFQGHFPGHPIYPGVMI IEGLAQAGGVLAFKSMEKDGVDLSDKVVYFMSIDNAKFRNPVRPGDKLEYRISVIKYRGR IWVLKGEAYINDGATLAAQAELQAMIMDK >gi|257443364|gb|ACYG01000009.1| GENE 179 183085 - 184218 676 377 aa, chain - ## HITS:1 COG:Cj0272 KEGG:ns NR:ns ## COG: Cj0272 COG1636 # Protein_GI_number: 15791643 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 377 1 363 363 347 47.0 2e-95 MLVHICCSVDCDYFLRRLKELAQEPLIGYFYDPNIHPYGEYVLRMHDSKRVCENLGIKFI PGEYDFQGWLQGARGLENEPEKGARCEFCFDFRMQKTAELALSLGERKITTTLLMSPKKS HSQLCASLQRICERYGLEFIAPDFRKNGGTNEQFALAKKDALYHQNYCGCIYALAAQRGE QRKTERNSSGILTADLRRNLAQGAEIYELMSPIDRQILPASVEEKLKFYKKLCSLEKNGV KFSVLRDRFLNYRLLRAWIKFDGEVVPSFVLFGSHFTRENVKLSVERECEIFCSDKGEIK ILSLAKFNEILRSNFKSVSEMLKNPPSLARQNKARAALCAAGSLSPIIVTDEIRAAKVQI YGLSRIFLDVREILVRI >gi|257443364|gb|ACYG01000009.1| GENE 180 184283 - 187645 3231 1120 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1357 NR:ns ## KEGG: CHAB381_1357 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 1120 7 1025 1025 553 33.0 1e-155 MKNFFIKHRRKFACGVGGFALFYVLAGFFGVPLFIEKALPKILEGRANFSVQDAKFNPFT YELNVTKPELSTFKPLFSADEINLKIGFSKLFKKTLAVEILHLKSPKFHVEREQNGTFNF EPLISEQKSESKDENSSFNVTLNNFKIERGSLGYVDNSLKRPFSLISTELNYEINGLSLK DETIGEHDLSAVSRTYDSLSFDGAIDLAPLRLHGKIDLKRLKIDPFWLSYLDPSGVRLKN GFLSATLNYRLSLDENIKFTLENSKLELESLEILQDQSLISLGSLKIPSFSLNTDVSDEI SGEVAIPQVLVSDAKYDMNETKISTGFEGAQVADFALDFNKTGANLRLNSAVKSVDLNRS SFANPLISVVSNDTKITENFLKFNAEGNDTALHTGFGAFNIADTQITLARSDKISLAATE LGAFSYDKEGAQNGASLKFAKISNSKIANKNGIFSGFESFGVQGIKFNVADLNLGVDKIL LNAPFFNSEVGVSGAKSINDLAILSAISKNPASPKKTANSNAVSQADANSTASGANLNSK KPSKSPALKFKIGEASVMGAQAKVGESFIVKNNVHEIKDFSATLSGLSSNFAEPFGIKAS LITGEITASADGKASIAPLNVGVSFSLNAPNLNVFNKYATEFITGSIAGELATQGQLKLS NAFSLEAKLSGKGLALSSGRDKIFSLASLNVAQISLSPNSLTLNKIALGSPAANILLNKD RRLNLASLIKPAAQLKQTAKPAEATPSRSAKSKANFAWSVKNISLSGGSLNFTDESLGTP FKLRISDMKASISEISPKRAADIKFSSLVSGSGLANITARAYPLDFKRKSDINVVLKEIP LAPASPYTAKYIGNEIAGGKLNLKLAYKIEDGKLNASNDLNLDRFELGKEMQSKDALNLP IGLAVSILKDSDDQIDLSLPLSGALSDPKFSYSALVWGAIKKLLSDIVLSPFRFMGKIAG VDTKKLESIDFEAASSEILISESSKIDDLAKVAKAKPELKIILNSAYNEKLDTHEFKRRS LQNTLTLMSNKQGLSTDEAIVALKVKYGIKSGGDEAMEELISAQKFTRSRLDELALARAA AVQAVLVQRGVSASRIEIKKPSEAELKQNSFIPLSLGVER >gi|257443364|gb|ACYG01000009.1| GENE 181 187696 - 188457 895 253 aa, chain + ## HITS:1 COG:Cj0197c KEGG:ns NR:ns ## COG: Cj0197c COG0289 # Protein_GI_number: 15791584 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Campylobacter jejuni # 1 253 1 242 242 297 60.0 1e-80 MINIGIHGGSGRMGTMIYECLKNFDQAQASAIYTVAPLDYTPSCAASRSYDELFSGCDVV IDFTIRDGAISLMKFALSHPKPLCIGTTALGDEGERLLRECGAKMPVLHATNMSLGVAVL NKLVALASRSLRDFDCEILEMHHRHKKDAPSGTAMSLAESAASARELNLKDVRVSGRDGL IGERSKDEIAVMSMRGGDIVGRHTVGFYGEGEFIELNHTATSRATFARGAIKAAVWLASQ NSGLYGIDDCLGI >gi|257443364|gb|ACYG01000009.1| GENE 182 188486 - 188803 338 105 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0146 NR:ns ## KEGG: CHAB381_0146 # Name: not_defined # Def: nucleotidyltransferase family protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 105 5 106 106 83 48.0 2e-15 MPTKDEILNFLRELKPELESFGIYKVGLFGSYAKGRANIASDIDVAIESSKQTIARLGGG MRAFIYLDELRGRIANKFKISVDLCDTASMSDKKKLKLLEGAIYV >gi|257443364|gb|ACYG01000009.1| GENE 183 188796 - 189152 307 118 aa, chain + ## HITS:1 COG:no KEGG:SUN_0813 NR:ns ## KEGG: SUN_0813 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 1 115 1 117 117 84 44.0 2e-15 MYNKRNLQRLELISKKIDAIQQICKIGVEKALADELRDRPAIIMHLISCNEQLQKIQDSG DIDILSIFAPSDIAGFRGIRNASAHDYEGLNLAIVQSVVSDYLPSIKQNIDKFLKNKI >gi|257443364|gb|ACYG01000009.1| GENE 184 189164 - 190510 1838 448 aa, chain + ## HITS:1 COG:Cj0196c KEGG:ns NR:ns ## COG: Cj0196c COG0034 # Protein_GI_number: 15791583 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Campylobacter jejuni # 1 447 1 445 445 625 66.0 1e-179 MCAIVGVINSEGAAKTAYYGLFAMQHRGQEASGISSSFNHHIKTIKATGLVTEVFSPASF EILKGNIAIGHNRYGTAGADSLKDAQPVAGNYALGEISIVHNGNLINKDEIRRKLVSEGA IFQSGMDTENILHLIARSKQEHLKDRIVEALNQCVGAYSLLILSRSKMFAVRDRYGVRPL SIGRLKDGGYIVASETCAFDLVGAEFIRDVKPGEMVIFEEGKDEFSSVQILKAAEARICA FEYIYFARPDSVVEGKNVYEVRKKLGAALARKCKNLKANFVVPVPDSGVPAALGFAQESK IPFEMAIVRNHYIGRTFIEPTQEVRNLKVKLKLNPIGAALHGKSVAVIDDSIVRGTTSKK IVELLRHAGAAHVHMCIASPELKYPERYGIDTPSVRELIAANMSTDEICKFIGADSLTFL SIPELVEALGSERKYSLVSFDGDYFIKD >gi|257443364|gb|ACYG01000009.1| GENE 185 190531 - 190887 472 118 aa, chain + ## HITS:1 COG:ECs2501 KEGG:ns NR:ns ## COG: ECs2501 COG3189 # Protein_GI_number: 15831755 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 5 115 11 121 122 115 53.0 2e-26 MTEFKIKRVYESAEEEDGFRVLCDRLWPRGVKKDALELDMWAKDITPSTEIRKLFAHKPE NFAHFKELYLAELEQNPAVAEFLKKVKNEPVVTLLYAAKNEHCNHAMILRDFLQSKVH >gi|257443364|gb|ACYG01000009.1| GENE 186 191360 - 191785 663 141 aa, chain + ## HITS:1 COG:RSp1153 KEGG:ns NR:ns ## COG: RSp1153 COG2005 # Protein_GI_number: 17549374 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Ralstonia solanacearum # 4 140 126 268 269 90 39.0 1e-18 MAISARNQLHVVISDVKTGAVNSLITAKTRGGDVLKATVTVDSEKTLDLKAGKEAVFLFK APNVIISKGENDLRLSAANQLKGKITAVKEGAINAEIDVRTAGGENLSAIVTNSSVKNLA LAVGDEVTAIIKATQIIVGVK >gi|257443364|gb|ACYG01000009.1| GENE 187 192417 - 192965 718 182 aa, chain - ## HITS:1 COG:BS_yrkL KEGG:ns NR:ns ## COG: BS_yrkL COG2249 # Protein_GI_number: 16079700 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus subtilis # 1 174 1 173 174 100 36.0 1e-21 MKTLVILSHPNFAASRVNKALSQVAKGAAGMEVRHLEGLYGTDTARIDARTEQDALLGAE RIVFLYPMYWLNVPPMLKAYIDIVFSHELVGSGALKGKVLQLALSASTPLSEYSKQGVIG FSLDEILTPLKIAANYCGMDFAVPFVSSGFEPGEFGDDAVDAAAARFGKLLRGELSPGEY QI >gi|257443364|gb|ACYG01000009.1| GENE 188 193330 - 193857 648 175 aa, chain + ## HITS:1 COG:Cj0271 KEGG:ns NR:ns ## COG: Cj0271 COG1225 # Protein_GI_number: 15791642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Campylobacter jejuni # 20 170 1 151 151 194 62.0 9e-50 MQRKTRIEDEFSAEDRERKITLQAGDEAPAFTLQNADGASVALKDFAGKRVALYFYPKDN TPGCTTEACEFSAAYDDFVAADCVIVGISPDSAKSHAGFIAKQSLKHILLSDPQHEVAKL YGAWQVRKNYGREYLGIVRSTFLIGADGKILKVYKSVKAKDHAAKVLADLLAAGK >gi|257443364|gb|ACYG01000009.1| GENE 189 194605 - 195033 632 142 aa, chain - ## HITS:1 COG:FN0974 KEGG:ns NR:ns ## COG: FN0974 COG0346 # Protein_GI_number: 19704309 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Fusobacterium nucleatum # 1 142 1 142 142 224 71.0 4e-59 MNKITCICLGVRSMQRALKFYRDGLGFKTDCKDDDPPVCFFKTPGTKFELYPLGALARDI NENDPPRGSGFGGITLAYNVKNKEDVASVIELVKKAGGAIVKEPQDAFWGGYHAYFADPD GYYWEVVWGPGFKFDEDGLLKF >gi|257443364|gb|ACYG01000009.1| GENE 190 195251 - 196123 1081 290 aa, chain - ## HITS:1 COG:SMc01213 KEGG:ns NR:ns ## COG: SMc01213 COG2321 # Protein_GI_number: 15965331 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Sinorhizobium meliloti # 47 286 53 304 311 269 53.0 6e-72 MKWQDGRRSSNVEDDRASSMRTSSGSLGMLIPIIRFLLGSKIGRIVLIIGVVAYFMGYNP LALLDGGASTQREPTDSPQEQEKLAFVSAVLAQTEDVWGEIFKSVGARYEEPGLRLFRDQ IASGCGFASAQTGPFYCPRDRKIYLDLSFFDELANKYKAGGDFAQAYVIAHEVGHHVQNL VGTLEQVAALKRRARSEAEQNALQVKVELQADCYAGVWAHYLAKAGRVLEAGDIDEALNA ASAIGDDTLQRKFSGRVVPDSFTHGTSAQRKEWFKKGLAGGNLKACSFEP >gi|257443364|gb|ACYG01000009.1| GENE 191 196313 - 196531 239 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 96 58 7e-19 MAKDDVIEIDGNVIEALPNATFKVELDNKHVILCHIAGKMRMHYIKIMPGDRVKVELTPY SLDKGRITYRYK >gi|257443364|gb|ACYG01000009.1| GENE 192 196704 - 196817 191 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224417907|ref|ZP_03655913.1| 50S ribosomal protein L36 [Helicobacter canadensis MIT 98-5491] # 1 37 1 37 37 78 89 3e-13 MKVRPSVKKMCDKCKIVKRKGVVHVICENPKHKQRQG >gi|257443364|gb|ACYG01000009.1| GENE 193 196821 - 197189 575 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|118475454|ref|YP_891266.1| 30S ribosomal protein S13 [Campylobacter fetus subsp. fetus 82-40] # 1 122 1 122 122 226 92 8e-58 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDAAGISYDKRVADLSEDEAAAIRKEI QEHYMVEGDLRKQVAMDIKALMDLGGYRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAA AK >gi|257443364|gb|ACYG01000009.1| GENE 194 197200 - 197592 624 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154147976|ref|YP_001405814.1| 30S ribosomal protein S11 [Campylobacter hominis ATCC BAA-381] # 1 130 1 130 130 244 90 2e-63 MAQKKVVKKKTVRKNIAKGIVYISATFNNTMITVTDEMGNAIAWSSAGALNFKGSKKSTP YAAQQAVEDALSKAKEHGIKEVGVKVQGPGSGRETAVKSVGSVEGIKVTYFKDITPLAHN GCRPPKRRRV >gi|257443364|gb|ACYG01000009.1| GENE 195 197611 - 198237 974 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154148523|ref|YP_001405813.1| 30S ribosomal protein S4 [Campylobacter hominis ATCC BAA-381] # 1 208 1 208 208 379 89 1e-104 MARYTGPVEKLERRLGVDLFMKGERRLAGKSALLKRPYAPGQHGQRRAKLSEYGSQLREK QKAKFMYGVSEKQFRRLFAEAARREGNTGAILVQLLEQRLDNVVYRMGFATTRRFARQLV THGHILVDGKRVDIPSYSVRAGQKIEVIEKSKNNPQISRALDLTAQTGIVAWVDVEKEKR YGIFSRVPEREEVVIPVEERFIVELYSK >gi|257443364|gb|ACYG01000009.1| GENE 196 198249 - 199274 1151 341 aa, chain + ## HITS:1 COG:Cj1595 KEGG:ns NR:ns ## COG: Cj1595 COG0202 # Protein_GI_number: 15792900 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Campylobacter jejuni # 1 340 1 337 337 431 66.0 1e-121 MRKITTSAHMPTEIKVENVSENVAKIIAYPFETGYAVTLAHPLRRLLYTSTVGFAPTAVK IEGVSHEFDSMRGMLEDMAAFIINLKGLRFKIKGDSLREVVEYSFKGPKEIYGSDLNNDA VEIVNPSAYLATINEDADLKFTLIIEKGIGYVPSEEIRENLDADFIALDAFFTPVTKAVY DIENVFVEDNPDYEKVVFTITTDGQISAIDAFKNALEAMYQQLAVFKGIVNISAADTFGR AIPANSEFAKLFESVSNLSLSARSFNCLDRADIRFIGELAIMEESELKDLKNLGKKSLEE IKAVMEEIGYPIGNQELGEKKEQLKRKLDELKAQRQKNEGQ >gi|257443364|gb|ACYG01000009.1| GENE 197 199275 - 199631 511 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|118474282|ref|YP_891270.1| 50S ribosomal protein L17 [Campylobacter fetus subsp. fetus 82-40] # 1 118 1 118 118 201 85 2e-50 MRHNHGYRKLGRTSSHRAALLKNLTIALVTSGKIETTLPKAKELRSYAEKLITRARKGDS EAHRFVFAALQDKAATNKLVTEIAPKYAGVNGGYTRIIKTRLRKGDAAEMAYIELISK >gi|257443364|gb|ACYG01000009.1| GENE 198 199662 - 200222 529 186 aa, chain + ## HITS:1 COG:mlr7497 KEGG:ns NR:ns ## COG: mlr7497 COG3034 # Protein_GI_number: 13476231 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 41 184 19 161 163 141 47.0 8e-34 MKFKILLPLIIIAAGLAWALDNYLSYKNIETINSEIPLKQALDGEQISKIRVYKSKRILE ILTSKGVAKSYKIALGREPEGHKEVQGDGKTPEGNYTINGKNPNSAYHLNLGISYPNKAD VAHAKSLGKSAGGDIKIHGLPNKFSYLGQSIAAFGDWTEGCIALVNDDMDELFEHVKIGT PIEILP >gi|257443364|gb|ACYG01000009.1| GENE 199 200732 - 200998 475 88 aa, chain + ## HITS:1 COG:Cj1639 KEGG:ns NR:ns ## COG: Cj1639 COG0694 # Protein_GI_number: 15792944 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Campylobacter jejuni # 1 86 1 87 90 112 59.0 2e-25 MIPFTDEELLAPVQDSLELIRPMLQNDGGDMKLLGIKNGVVYVRLTGHCHGCAASSQTLK YGVERQLRMDIHPELSVVNIPEGEEFEL >gi|257443364|gb|ACYG01000009.1| GENE 200 200988 - 201536 557 182 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_0062 NR:ns ## KEGG: CFF8240_0062 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 2 175 5 175 182 123 43.0 3e-27 MNYKKLGLKAFSRGEFELAKLYFSLAYEKSGEEEILFLLELCQTALADREEAFMLFDFYN LSPKTQTAELFKILNSINEKIANEAASEPGAEDEIAVIAYADFMRAVGQRGFKDAFESII FSSKIAISDKTEMIEFLENLIENGYYEMGLNYVESSAAAYAGDERFEALMQKIKNHENTT RK >gi|257443364|gb|ACYG01000009.1| GENE 201 201514 - 202824 1431 436 aa, chain + ## HITS:1 COG:Cj1641 KEGG:ns NR:ns ## COG: Cj1641 COG0769 # Protein_GI_number: 15792946 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Campylobacter jejuni # 1 431 1 427 427 496 58.0 1e-140 MKIRLENSFITDNSAECEAGCFFMRTSANAKFEPEAAQKGAQIISIVQAKELLKIDSRIK IVGITGTNGKTTTAAAIYSTLLDLGFSCGLSGTRGAFINERRIDEKGLTTSSVFKTMSYL YEAGKQGCEYFVMEVSSHAIAQNRIEGLEFALKIFTNLSQDHLDYHGSMQEYAAVKSSFF ADDAPKLINADDGHIKFDPANALTYGIKNAASFGVSGYGLKGGIDALVRTPNGDNAQLQS DLIGEFNLYNLTAAFAAVKILTKLPNEKIAKALANFGGVEGRVQIVNKDPLVIVDFAHTP DGIEKVLNALRASGEIIAVFGAGGDRDHGKRPKMGAIAEHFAKICIVTSDNPRSENPDEI IEQICAGMRRKDKILKITDRKEAIARALDLAKNGEMIAILGKGDETYQEIKGVKHPFSDK QVVSELVAARGESNLD >gi|257443364|gb|ACYG01000009.1| GENE 202 202841 - 203188 565 115 aa, chain + ## HITS:1 COG:HP0034 KEGG:ns NR:ns ## COG: HP0034 COG0853 # Protein_GI_number: 15644667 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Helicobacter pylori 26695 # 1 115 1 115 117 136 64.0 1e-32 MKIEILSSKIHRARVTDANLNYVGSITIGPELIEAAGLCEYQKVEILNVNNGERFATYVI RGEKKGEICLNGAAARKVCVGDVVIIVAYAQMSAKKARSFKPKIVQVNEKNQITE >gi|257443364|gb|ACYG01000009.1| GENE 203 203191 - 203520 574 109 aa, chain + ## HITS:1 COG:Cj1642 KEGG:ns NR:ns ## COG: Cj1642 COG0718 # Protein_GI_number: 15792947 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 101 1 101 103 101 59.0 4e-22 MFEGMDFSKMGQMLDQMQAKAKQIEEENARKEFTVKSGAGMVAIRLNGAGEVLDLSIDDS LFSDKESLQILLISAIGDAIKLVENEKKGAAASMLGGLGGLGDLLGNKG >gi|257443364|gb|ACYG01000009.1| GENE 204 204110 - 204961 1110 283 aa, chain + ## HITS:1 COG:Cj1644 KEGG:ns NR:ns ## COG: Cj1644 COG0142 # Protein_GI_number: 15792949 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Campylobacter jejuni # 1 281 1 281 281 309 59.0 4e-84 MDILEKFKDYLKQNELKAPSFHPYFEEALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGA LAIAMALEMIHTYSLIHDDLPAMDDADLRRGRPSLHKKYDEVTAILVGDALNTDAFLIAA SANLSDEIKIKCIKTLARNAGSGGMVLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAA FELGAIIGGLKDELAHELYKIGLKLGLIFQIEDDIIDATGDEASAGKPVGADGAKNSFVN LLGLAGARSYKQRLIDEVSGAMSGYDESLRDLVLNLIEKYLKG >gi|257443364|gb|ACYG01000009.1| GENE 205 204965 - 206893 2581 642 aa, chain + ## HITS:1 COG:Cj1645 KEGG:ns NR:ns ## COG: Cj1645 COG0021 # Protein_GI_number: 15792950 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Campylobacter jejuni # 1 628 1 621 632 827 64.0 0 MSSEQLSKISNTIKFLSADMIQSANSGHPGTPMGLSDVMSVFMSKVRHNPKNPAWLNRDR VVFSGGHASALVYSYLYLSGYDLSMDDLKSFRRLHSKTPGHPEITTPGVEIATGPLGQGV ANAVGFAMAAKYAAHLLNEEGNEIIDHRVYCFCGDGDLQEGISYEACALAGRHNLDNLTI IYDSNGITIDGSTDIAWFEDVKVRFEAQGFEVARIDGHNFDQIEFVLDEVKNKTKPYLII ANTTIGKGALELEGTAKTHGAPLGEELLARAKQSLGFDPAQSFVVSEDVLFATRAAVEKG DLEERLWKEKLAKLSDEKRALLNELLNPDFSKIEFPDFSGLKVATRDSNGKILNAIANAV PGFLGGSADLAASNKTELKGGGDFPCGKNLHFGIREHAMAAIGNAFARYGLFIPFSATFF IFSDYLKTGARLAALMGLRHYFVFTHDSIGVGEDGPTHEPIEQLSTFRAMPGFYTFRPAD GNENVKCWRTALALNAPAAFVCSRQGLEPLPKAVLGDVQNGAYLLRQSKEAQITLIASGS EVSLCLKAAAILQEQGIGANVVSAPCFELLCEQDADYLAQILQAQTKILAVEAASALEWY KFADAVHGMQSFGESGNASELFKLFGFTDVAIAKEARELLGQ >gi|257443364|gb|ACYG01000009.1| GENE 206 207032 - 207331 388 99 aa, chain + ## HITS:1 COG:lin2534 KEGG:ns NR:ns ## COG: lin2534 COG3708 # Protein_GI_number: 16801596 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 10 98 39 127 127 57 38.0 5e-09 MKECYDGQSEIYGVYYDYENGADGLYDIFIGTKAPRGGEALEIKSGKYAVFSFPNEPQNV ARFWSKIWSFFEASELKRAFGTDFEFYGGDEIKIFISIL Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:50:15 2011 Seq name: gi|257443361|gb|ACYG01000010.1| Campylobacter gracilis RM3268 contig00015, whole genome shotgun sequence Length of sequence - 1259 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 247 - 306 5.5 1 1 Tu 1 . + CDS 388 - 1258 903 ## COG0731 Fe-S oxidoreductases Predicted protein(s) >gi|257443361|gb|ACYG01000010.1| GENE 1 388 - 1258 903 290 aa, chain + ## HITS:1 COG:Cj1244 KEGG:ns NR:ns ## COG: Cj1244 COG0731 # Protein_GI_number: 15792568 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductases # Organism: Campylobacter jejuni # 1 290 1 291 300 265 48.0 6e-71 MRYIFGPVASRRFGRSLGIDLSPQRKQCNFNCVYCELGAGKPVSAMSEPCEIGPVIAELK TALQSHAGIDVITITANGEPTLHPRFAELVDALKALNLPQKLLVLSNGSLVRENSAALAK IDICKFSLDSVLAKSFRKVDGPHAGISAEDIVSAIADFAREFRGELDIEILVVRGLNDTQ EDFAALNVALARINPHRVDLGTIDRPPAYRAEGVSEAQLRYLATFIENQNVNIIAAPHYA SERLSFSEDEILHTLARRPQRTSDVEAMFDEASAQLLKRLAGAGKVVFKD Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:50:19 2011 Seq name: gi|257443338|gb|ACYG01000011.1| Campylobacter gracilis RM3268 contig00045, whole genome shotgun sequence Length of sequence - 14283 bp Number of predicted genes - 16, with homology - 16 Number of transcription units - 10, operones - 4 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 61 - 264 343 ## CCC13826_2151 hypothetical protein 2 1 Op 2 . - CDS 338 - 1078 773 ## CHAB381_0322 putative integral membrane protein - Prom 1130 - 1189 1.9 - Term 1386 - 1438 4.1 3 2 Tu 1 . - CDS 1504 - 2193 1058 ## CHAB381_0548 deoxyuridine triphosphatase domain-containing protein - Prom 2236 - 2295 6.7 + Prom 2134 - 2193 9.0 4 3 Tu 1 . + CDS 2274 - 2687 506 ## COG3787 Uncharacterized protein conserved in bacteria + Term 2854 - 2892 -0.0 5 4 Tu 1 . - CDS 3080 - 3217 89 ## gi|257459247|ref|ZP_05624364.1| conserved hypothetical protein - Prom 3279 - 3338 5.2 + Prom 3243 - 3302 5.4 6 5 Tu 1 . + CDS 3324 - 3827 616 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis + Term 3843 - 3879 1.7 + Prom 4126 - 4185 6.1 7 6 Tu 1 . + CDS 4414 - 4752 350 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 4831 - 4868 2.4 + Prom 4817 - 4876 5.2 8 7 Tu 1 . + CDS 4916 - 6373 1192 ## CCC13826_0642 hypothetical protein + Term 6532 - 6573 6.1 9 8 Op 1 1/1.000 - CDS 6889 - 7920 1277 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 10 8 Op 2 . - CDS 7917 - 8522 632 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 8548 - 8607 7.3 11 9 Op 1 . - CDS 8638 - 9822 1126 ## COG0455 ATPases involved in chromosome partitioning 12 9 Op 2 2/0.000 - CDS 9804 - 10340 171 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 13 9 Op 3 4/0.000 - CDS 10337 - 11377 1069 ## COG0006 Xaa-Pro aminopeptidase 14 9 Op 4 . - CDS 11392 - 11859 736 ## COG0757 3-dehydroquinate dehydratase II - Prom 12031 - 12090 6.2 + Prom 11952 - 12011 5.7 15 10 Op 1 1/1.000 + CDS 12032 - 13249 1021 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 16 10 Op 2 . + CDS 13237 - 14109 1162 ## COG0616 Periplasmic serine proteases (ClpP class) Predicted protein(s) >gi|257443338|gb|ACYG01000011.1| GENE 1 61 - 264 343 67 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_2151 NR:ns ## KEGG: CCC13826_2151 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 62 1 62 62 83 72.0 2e-15 MKSGDIYICNICSLKSSDDENAVFIKAHKNGETVHICTSCMPSVIHGSGMVVKSNSEIEE ELQDAAN >gi|257443338|gb|ACYG01000011.1| GENE 2 338 - 1078 773 246 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0322 NR:ns ## KEGG: CHAB381_0322 # Name: not_defined # Def: putative integral membrane protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 239 1 237 247 207 51.0 4e-52 MGRIFNLAKQDFFTRKFILLSLLPLVCSLIILGTLAFFGGKELFDALSQGAQSGDFSFLD EQRFPVIAKILSFAATKWIIGAIFSVFASFAVLMLSVFCALIIAGFLTPAVTKEINARHY HLSRTDEASTARVLKLMSLEILKFLAILFICSVLLFVPVINLFIINVPFFYIYYKLVLID VASNALSAKSFERSYKMGGGYKFALSAFIFYLLCLVPLVGLFFQLFFIIFLTHVVLIDES TRNKNR >gi|257443338|gb|ACYG01000011.1| GENE 3 1504 - 2193 1058 229 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0548 NR:ns ## KEGG: CHAB381_0548 # Name: not_defined # Def: deoxyuridine triphosphatase domain-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 229 1 229 229 286 59.0 7e-76 MENYKKVKEMFLMQQALNDETNGVGWEDGYTKNGKLINWKRCIYMECAELIDSFAWKHWK NISAAPDVNNIVIEIVDIWHFVMSYILEQYYGSKNIDHIVSDVTAVSGFAEFSSYAYDVR EYSIYEIVNDIELIIHETSGFELQIGELLTDFFRVAIKCGVSLDILFAKYIGKNVLNKFR QNNGYKEGSYRKIWGDLEDNEVLIEVLSKGAVSANEIYEQLQKIYDATR >gi|257443338|gb|ACYG01000011.1| GENE 4 2274 - 2687 506 137 aa, chain + ## HITS:1 COG:STM3270 KEGG:ns NR:ns ## COG: STM3270 COG3787 # Protein_GI_number: 16766568 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 29 137 28 140 147 88 42.0 3e-18 MCAAQDKFDEFLGRMKLLSLGVLRNNLPYCCSAFYAYDPQNKELIIASANDSEHIKAVFA NRGVAATVALDTKFVGRIKGVQICGHIRSADERETSLYLKRFPFARAMETDFFTIRIDWM KMTDNTLTFGKKLIWER >gi|257443338|gb|ACYG01000011.1| GENE 5 3080 - 3217 89 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459247|ref|ZP_05624364.1| ## NR: gi|257459247|ref|ZP_05624364.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 45 1 45 45 71 100.0 3e-11 MPYINVKITKERGGLSREQKARLVKNLTDALVAVLGRGEKTTVLR >gi|257443338|gb|ACYG01000011.1| GENE 6 3324 - 3827 616 167 aa, chain + ## HITS:1 COG:NMA0463 KEGG:ns NR:ns ## COG: NMA0463 COG1854 # Protein_GI_number: 15793465 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Neisseria meningitidis Z2491 # 1 162 1 162 168 251 70.0 3e-67 MPLLDSFKVDHTRMNAPGVRLAKSMRTKSGDKISVYDLRFCRPNLEIMSERGTHTLEHLF AGFMREHLNSADVEIIDISPMGCRTGFYMSVIGAPSESAVATAWSASMKDILGVGSQADI PELNKFQCGTFAMHSLAEAKQIAQNVLNKGIGVIKNDEIALDPSKIK >gi|257443338|gb|ACYG01000011.1| GENE 7 4414 - 4752 350 112 aa, chain + ## HITS:1 COG:sll1163 KEGG:ns NR:ns ## COG: sll1163 COG1917 # Protein_GI_number: 16330416 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Synechocystis # 2 110 22 131 135 75 35.0 3e-14 MQRIFHIKDAICSDERAVKTTFFTTEATCGAVWIVKRGQVVAPHIHPDGDDVWICLSGRG VFYPSKGEEVPICAGDLIISKSGECHGMKNTGDEDFVFASVTAPIPCGYEAI >gi|257443338|gb|ACYG01000011.1| GENE 8 4916 - 6373 1192 485 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0642 NR:ns ## KEGG: CCC13826_0642 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 75 478 38 455 503 267 34.0 7e-70 MYEDFTQELKDERAQKKRKARARKAEADRKPVRDEPRDMPLWRKIALGATFVFAAFSALA LFAVINSSDDYSPRDDEQIKYSDFYKKGDEIYALVVGAGYFAIPDADAASFRVLDFSSGY RSNVAADKNAVYCGNIAMSELEPARTKAVAFGYVSDGQVSYFCDGEAVRNDALGALKFTY ETLAHIFWDAPKPQSYVYKFKRIDATDLRQIAGVYYAAEGSRAFYKGEILPGADAASLRR IEGSDGRASGVYAADGANVYFKNLRLDARDNGGHYELLRQWLDYFLWDAKSGDVFANDLK FDPAAAPYTPLNRQLAHSNHLLFASLGGIYYFDENDGKQKRAADNPFAGEVRALSGSVFQ SGERIYFLEGAEVWGGGRSTRRLVARKSGLFALELPHEWRRVGGVHGGLYGWVYSNGGRF FYFDDLGSSQLIDRCIYEIRDLDLVEILLQKSSLGTSKIREMIKSGGLEVVDGELLFEVK TRVEF >gi|257443338|gb|ACYG01000011.1| GENE 9 6889 - 7920 1277 343 aa, chain - ## HITS:1 COG:Cj0053c KEGG:ns NR:ns ## COG: Cj0053c COG0482 # Protein_GI_number: 15791445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Campylobacter jejuni # 1 343 1 338 338 405 58.0 1e-113 MKILIAMSGGVDSSMCAKLLQDAGHEVQGCYMKLHAKPGYHEANIAKVRKVGEFLGIKIH ILDLQDDFNRDVYEPFVQAYIGGLTPNPCALCNRRIKLGKLLEFAREQGFERLATGHYVR IEDGLLKAAADLSKDQSYFLANIDPAALEFMLFPLGGMYKKDVKEAARAYAELSQIASAS ESSEICFVDTTYIDVLNRHTGTKMPGIVRDRAGNAIGTHEGYMHYTIGKRRGFTVHGAHE PHFVLSIDPHKNEIVVGGKEELATYEFDTENFNNFLSRDEILNMPGLGVKIRYRSAKLPV KISPREDGGVHAVLSAPAAGIAPAQLAVFYDERDRVVASGFIK >gi|257443338|gb|ACYG01000011.1| GENE 10 7917 - 8522 632 201 aa, chain - ## HITS:1 COG:DR0471 KEGG:ns NR:ns ## COG: DR0471 COG1611 # Protein_GI_number: 15805498 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Deinococcus radiodurans # 6 196 37 228 256 147 45.0 1e-35 MQLKEILKDIKIARDNLKNVGKSATIFGSARFSEDNRYVKDAQKLCEGLADLGYSIITGG GGGIMQGANRGAFARARTHSVGFNIMLPFEQKSNGFLTQGAKFSAFAPRKGALIENSEIF VIFPGGFGTLDEFFEILVLVQTGFKRARIYLYDEEFYAPLMEFFHTSLLKSGAINESDLQ NFKLCDSVDEILTDVQRKENG >gi|257443338|gb|ACYG01000011.1| GENE 11 8638 - 9822 1126 394 aa, chain - ## HITS:1 COG:Cj0063c KEGG:ns NR:ns ## COG: Cj0063c COG0455 # Protein_GI_number: 15791455 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Campylobacter jejuni # 230 390 122 284 288 68 30.0 2e-11 MQTKIVNFLSAKGGVGKSVIAANFAEILSEQGYRTAIIEAPNLNNQEIILNALQRKRISL PSAIAVKISQNLTLVSPAFASQNPASSQNSIKNANSSADDYVMQNSIGSAQNREGDESIS SHNYAQKLTSSDGKNNSENSATSNSIANAAKNSTNCVAKKPQNCEDGWNFTESESLKNFK SDDFTKQNSIPDENSQNSASKDEMKNSARSSNPEEAGNSANAKAHESPARFASELKEAGI FDFILIDAGLEYLGDFLSIGDENIVLCANEPCSISNTYALLKTLGSSKKEVLFLLNFTAS EDDAVMIYDNLKSVAHRNISELGFKLLGFVPFCKQVAVCSQNRALFNSHYPFSPATIALK QSVSRFLSKQGCEPIDMSAYRGVGGFLRKLSNLV >gi|257443338|gb|ACYG01000011.1| GENE 12 9804 - 10340 171 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 36 166 119 248 278 70 29 6e-12 MNLRLKKNGFYECADALCVVKSAVFPMRRRERKNLKNLYLLGLGGNLGDVRRCFERFYRV LQSDARFFVAQNSLILKNKPFGFLDQPDFLNAVMLVQSSLPPLTLLKIMQRAELKFGRKR SFKNAPRTLDVDILYASAKVRACEQLMLPHPGVSERISVILPLGEMKFKRGLICKLKS >gi|257443338|gb|ACYG01000011.1| GENE 13 10337 - 11377 1069 346 aa, chain - ## HITS:1 COG:jhp0387 KEGG:ns NR:ns ## COG: jhp0387 COG0006 # Protein_GI_number: 15611455 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Helicobacter pylori J99 # 8 341 13 357 357 294 46.0 2e-79 MKNFILKDENAVYHECGYSCDNAIFLSLAGRKFFLTDARYSIEARELCKDTEVIEVERNL IKDARLFLRKTGVRELVYNPYDFSAGEWEALSKELGIRFKARANFSQISRIVKSEDEIKI LKQAAQLGAERFDEFAAFVRAEGEGMSEEELFFNAELIFKKKGELALSFSPIVAINENAA KAHALPSKKRLRQGDLLLLDAGVKFNCYCSDRTRTACFDENFNFGKEQNFKNAKRQEIYE IVKEAQALAIAAVMPGKKASEIDVAARDFIAAQGYGEAFFHSTGHGVGVDIHELPFISKR GDTVLKEGMVFSVEPGIYLPGEFGVRIEDVVVVRENGAEILSEQIR >gi|257443338|gb|ACYG01000011.1| GENE 14 11392 - 11859 736 155 aa, chain - ## HITS:1 COG:Cj0066c KEGG:ns NR:ns ## COG: Cj0066c COG0757 # Protein_GI_number: 15791458 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Campylobacter jejuni # 1 155 1 155 159 225 73.0 3e-59 MKIMVIQGPNINMLGMREPAIYGVMKMEDIHKQMKAVADQSGNEIEFFQSNFEGEIVDKI QECFGTCDGIIINPAAYTHTSLAIRDALAAVSLPVIEVHISNIARREELRQKSLIAPVTA GQIIGFGPVGYHLAMIGMIQIFEQIKAARAEQKAK >gi|257443338|gb|ACYG01000011.1| GENE 15 12032 - 13249 1021 405 aa, chain + ## HITS:1 COG:Cj0067 KEGG:ns NR:ns ## COG: Cj0067 COG0402 # Protein_GI_number: 15791459 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Campylobacter jejuni # 1 405 1 409 409 398 50.0 1e-110 MRILRAKWILACDENFKILKEGAIVFDKKIIEVCTFASAARRYPQAEILDFGGDIAMPAF INPHVHLEFSANKGTLRYGDFLDWLGSVIASRQQLDAAARGRLIAEQIAAMMRSGVGTIG EISSFGGEAEACAQSGIRTVFFNEILGASKDVAAENISKFKERFERAKALASSLFISAVS VHSPYSTHPQITEFATKFARENGLAISTHFMESAYERQWLRTGRGKFKTWLAKFNPTPAP FYSPQSFVAHFSGLRTLFTHCVWVDDFSIFDPKLHSITHCARSNRLLSKKRLSFKKLLAS GLNYNIATDGLSSNFSLSFLDELRANLMMHDELGLIELARVLILGATRNAAAALGLNLGE LRAGKLADIAVFEGIECDEAQLPLQLILQSKNAKSLFIEGMKCNF >gi|257443338|gb|ACYG01000011.1| GENE 16 13237 - 14109 1162 290 aa, chain + ## HITS:1 COG:Cj0068 KEGG:ns NR:ns ## COG: Cj0068 COG0616 # Protein_GI_number: 15791460 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Campylobacter jejuni # 1 279 1 279 298 268 53.0 7e-72 MQFLKNIFAPIGAVLGFINKYFKSLIFLLILFLIFAGGESAQQKGANLAQLSLSGAIMDD SEILEKIEALKNDEAIKGVLLLIDSPGGALSPSVEISLAIKSLNSRKPVVAYAKGTMASG SYLGGVWASKIYANPGSFIGSIGVIMQGLDVSEAAAKLGFAEQIVKAGELKEAGTMMRKW SDAERASLQALVDESYELFTREVAQARSLDIRKRDTWANARVFLASGAKGVGLIDEVGSL DDAKSALVKASGVADPIWQEPSAYEKMMDRLANKSESLVRGAFGAKLMAY Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:50:42 2011 Seq name: gi|257443334|gb|ACYG01000012.1| Campylobacter gracilis RM3268 contig00043, whole genome shotgun sequence Length of sequence - 796 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 22 - 483 380 ## gi|257459263|ref|ZP_05624379.1| hypothetical protein CAMGR0001_2312 Predicted protein(s) >gi|257443334|gb|ACYG01000012.1| GENE 1 22 - 483 380 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459263|ref|ZP_05624379.1| ## NR: gi|257459263|ref|ZP_05624379.1| hypothetical protein CAMGR0001_2312 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2312 [Campylobacter gracilis RM3268] # 1 153 1 153 153 287 100.0 1e-76 MKFFLIIISIFLYIYIVLSVLSFSPCDINDMLRRNYNRMEQKCRLKLIRRANNGNSGAHR RLFYFYESYFLDRYCVDKKAQQELDKEELNFIKKFHSGNLDLCTNNGFIVGLLKKCVLKE GNFTLCTKRIGKEKEINMDEVIHLYYTDKKPKE Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:50:50 2011 Seq name: gi|257443332|gb|ACYG01000013.1| Campylobacter gracilis RM3268 contig00046, whole genome shotgun sequence Length of sequence - 1074 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:50:58 2011 Seq name: gi|257443281|gb|ACYG01000014.1| Campylobacter gracilis RM3268 contig00022, whole genome shotgun sequence Length of sequence - 28013 bp Number of predicted genes - 49, with homology - 46 Number of transcription units - 10, operones - 7 average op.length - 6.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 2408 2258 ## CCV52592_0029 hypothetical protein 2 1 Op 2 . - CDS 2409 - 3794 1231 ## CCV52592_0030 hypothetical protein 3 1 Op 3 . - CDS 3798 - 4142 296 ## CCV52592_0031 hypothetical protein 4 1 Op 4 . - CDS 4153 - 4815 885 ## CCV52592_0032 Hit family protein 5 1 Op 5 . - CDS 4818 - 5069 413 ## gi|257459273|ref|ZP_05624387.1| hypothetical protein CAMGR0001_2106 6 1 Op 6 . - CDS 5059 - 6609 1804 ## CCV52592_0034 hypothetical protein 7 1 Op 7 . - CDS 6602 - 6913 249 ## CCV52592_0036 putative resolvase 8 1 Op 8 . - CDS 6894 - 8189 1372 ## CCV52592_0037 Ppx/GppA family phosphatase 9 1 Op 9 . - CDS 8182 - 8649 509 ## CCV52592_0038 GatB/Yqey family protein - Prom 8673 - 8732 3.3 10 1 Op 10 . - CDS 8737 - 8949 385 ## gi|257459278|ref|ZP_05624392.1| conserved hypothetical protein - Prom 8991 - 9050 10.8 + Prom 8955 - 9014 9.9 11 2 Op 1 . + CDS 9112 - 9405 480 ## gi|257459279|ref|ZP_05624393.1| hypothetical protein CAMGR0001_2112 12 2 Op 2 . + CDS 9456 - 10328 485 ## COG0582 Integrase 13 3 Op 1 . - CDS 10311 - 10607 209 ## gi|257459281|ref|ZP_05624395.1| hypothetical protein CAMGR0001_2113 14 3 Op 2 . - CDS 10607 - 10957 335 ## CLOST_1536 hypothetical protein 15 3 Op 3 . - CDS 10923 - 11186 172 ## Nitsa_1799 hnh endonuclease 16 3 Op 4 . - CDS 11186 - 11488 460 ## gi|257459284|ref|ZP_05624398.1| hypothetical protein CAMGR0001_2117 17 3 Op 5 . - CDS 11485 - 12153 680 ## COG0863 DNA modification methylase 18 3 Op 6 . - CDS 12143 - 12754 504 ## gi|257459286|ref|ZP_05624400.1| hypothetical protein CAMGR0001_2119 19 3 Op 7 . - CDS 12751 - 13641 684 ## CCV52592_0044 hypothetical protein 20 3 Op 8 . - CDS 13638 - 14447 783 ## COG3617 Prophage antirepressor - Prom 14468 - 14527 1.8 + Prom 14442 - 14501 7.3 21 4 Tu 1 . + CDS 14534 - 14719 224 ## gi|257459289|ref|ZP_05624403.1| conserved hypothetical protein + Term 14786 - 14820 -0.8 - Term 14579 - 14608 0.5 22 5 Op 1 . - CDS 14679 - 14849 115 ## gi|257459290|ref|ZP_05624404.1| hypothetical protein CAMGR0001_2122 23 5 Op 2 . - CDS 14834 - 15016 182 ## gi|257459291|ref|ZP_05624405.1| hypothetical protein CAMGR0001_2124 - Term 15034 - 15077 -0.6 24 5 Op 3 . - CDS 15083 - 15292 224 ## gi|257459292|ref|ZP_05624406.1| hypothetical protein CAMGR0001_2125 25 5 Op 4 . - CDS 15273 - 15527 160 ## gi|257459293|ref|ZP_05624407.1| hypothetical protein CAMGR0001_2126 - Prom 15563 - 15622 5.3 + Prom 15542 - 15601 7.2 26 6 Tu 1 . + CDS 15622 - 16401 1028 ## AFE_0998 transcriptional regulator, putative + Term 16481 - 16526 3.1 27 7 Op 1 . - CDS 16403 - 16897 587 ## CCV52592_0052 hypothetical protein 28 7 Op 2 . - CDS 16916 - 17134 327 ## CCV52592_1309 hypothetical protein 29 7 Op 3 . - CDS 17146 - 17598 263 ## gi|257459297|ref|ZP_05624411.1| hypothetical protein CAMGR0001_2130 - Term 17616 - 17654 5.1 30 7 Op 4 . - CDS 17657 - 17803 79 ## - Prom 17843 - 17902 4.0 + TRNA 18274 - 18360 20.6 # Pseudo ??? 0 0 + Prom 18285 - 18344 80.4 31 8 Op 1 . + CDS 18468 - 18809 268 ## gi|257459300|ref|ZP_05624414.1| hypothetical protein CAMGR0001_2134 32 8 Op 2 . + CDS 18821 - 19234 308 ## gi|257459301|ref|ZP_05624415.1| hypothetical protein CAMGR0001_2135 33 8 Op 3 . + CDS 19231 - 19440 294 ## gi|257459302|ref|ZP_05624416.1| hypothetical protein CAMGR0001_2136 + Prom 19460 - 19519 3.8 34 9 Op 1 . + CDS 19619 - 20605 1184 ## CCV52592_0054 CAP-Gly domain-containing protein 35 9 Op 2 . + CDS 20598 - 21470 997 ## Nitsa_1200 hypothetical protein 36 9 Op 3 . + CDS 21480 - 22466 1152 ## COG3723 Recombinational DNA repair protein (RecE pathway) 37 9 Op 4 . + CDS 22459 - 22935 574 ## COG0629 Single-stranded DNA-binding protein 38 9 Op 5 . + CDS 22946 - 23158 242 ## 39 9 Op 6 . + CDS 23155 - 23319 208 ## gi|257459308|ref|ZP_05624422.1| hypothetical protein CAMGR0001_2142 40 9 Op 7 . + CDS 23273 - 23794 573 ## gi|257459309|ref|ZP_05624423.1| hypothetical protein CAMGR0001_2143 41 9 Op 8 . + CDS 23760 - 24437 367 ## CJE1421 site-specific DNA-methyltransferase 42 9 Op 9 . + CDS 24522 - 25016 500 ## gi|257459311|ref|ZP_05624425.1| hypothetical protein CAMGR0001_2145 43 9 Op 10 . + CDS 25028 - 25480 513 ## gi|257459312|ref|ZP_05624426.1| hypothetical protein CAMGR0001_2146 44 9 Op 11 . + CDS 25482 - 25721 151 ## gi|257459313|ref|ZP_05624427.1| hypothetical protein CAMGR0001_2147 45 9 Op 12 . + CDS 25723 - 25977 198 ## gi|257459314|ref|ZP_05624428.1| hypothetical protein CAMGR0001_2148 46 9 Op 13 . + CDS 25974 - 26138 225 ## 47 9 Op 14 . + CDS 26135 - 26488 158 ## gi|257459316|ref|ZP_05624430.1| hypothetical protein CAMGR0001_2150 48 9 Op 15 . + CDS 26481 - 26657 239 ## gi|257459317|ref|ZP_05624431.1| conserved hypothetical protein + Term 26758 - 26812 9.9 - Term 26531 - 26566 2.8 49 10 Tu 1 . - CDS 26654 - 27805 503 ## PROTEIN SUPPORTED gi|239524421|gb|EEQ64287.1| 30S ribosomal protein S15 - Prom 27918 - 27977 7.2 Predicted protein(s) >gi|257443281|gb|ACYG01000014.1| GENE 1 2 - 2408 2258 802 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0029 NR:ns ## KEGG: CCV52592_0029 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 249 802 226 770 1048 67 22.0 2e-09 MNARSFLGDEKISALMQQGYSPEQITNYAKTEYYKQQGAQQASLTPQQNTAAVQPAAQNI QQTQGYTRVPIRDEQTGEVMNSAPKLGLDGRPIPAAPTPGRSEEARAKEKKNRFLGGALD GLEMEAKTILDNSFFGSGEPAKSKDEILKDRVAKASSRSLFQTIAGDEKDAAELQKDLDY IAKNAGYDLGAVQTSDGKIYFGARGADGRIIQKEVTPSLWDDLAARKTEIAGGVVGAGLA PFTGGASLVPMLAMSAGGSALGSMNDLRQKGEATGREYDASDYASRALQAAGEDALGGVA IAGTGKLIKAAAPAIKQAGERIVSPVAKNAAKIADNNILVNLMRRGVTDNIEGAEAQYIK SMGGEAEALKNLASTKNALGEEGFKNFANSERSLQIPKTGNEAIDKSINYINEKGIKPAE QTIRRVIQGENLNEREANLLASALSNDKGADLITRSVAGDADAFAKTQKIMTNLNSSFAK NINESFKDAPNVVQVFKNYEARTKNDFGNVIKTLDNEFSTLGLDTRALSARVGEALENTL PKGSQITKYAMKGIQKGGLEGLQDARAFLNGEISTLKKANDALSRERLLELREARGIIDD AIDGTLDQFSQINPEVGARAKELMQTARADYSAYKEIEQSDLFKRLTRGMKNTNDLTSAL LKSADNQTGLNLDEVLSVLNPAERANVEGGLLKNIIERNTKEGITDFKTALGQIDQIPFK SERVAGVIDQLKESAPILKNSGEILKKLSEMTPKTAELQQGIGKSITGAFQVMLRNRLVN KLKSKIPWYGNNQALKNHIVNA >gi|257443281|gb|ACYG01000014.1| GENE 2 2409 - 3794 1231 461 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0030 NR:ns ## KEGG: CCV52592_0030 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 117 1 115 412 75 41.0 4e-12 MAFFNPHKVDFNYDTQMIDAVGAVGKSLYEIYKDNVAKNQNQAQLDETNRANLMKEYLYG QKNQETARHNQAAEAEIAKKNAFDQDLGLRNFYSTDALRRAQIGNLYADNARQNAQLQWN MSQARDKAQAEQEKQAGIDMAWYNAGQQGGQFGELPQGLSDAEKINLGRQYRLQTEAQGG INKAQEPILKQQEAQRKQKQIDAEADIIFNTLGGKIPQGMTDPQAQREYINAYAAAKTNP QLVKQTETSAGQKNAIALNQKKFLEGMSALNAGENFINTTSNLNSLTGKGIETQSGIFDR AVNTLGSNVSTDAAAFNASADRWARARQNLQKGNGNFNYTTFRDNLNPGITGSQTAQETA INSYIQDLMEVQNVIDNLRAQGYAGADDYQRQLDAKMKSIEDIRELLAGKKKGAKASSGE ATQLFMQKMGVPTNSAPQRGYSPSDDLRQRLDEIGIFNEEF >gi|257443281|gb|ACYG01000014.1| GENE 3 3798 - 4142 296 114 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0031 NR:ns ## KEGG: CCV52592_0031 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 25 114 2 92 100 87 57.0 2e-16 MDMMGLATNFASLPANLAGTNSGWNFLDMLKGVGNGALGLFSGSGGGTPNWLQAVGLAGG LYSGLQQQKAANKALQMQQDAYNFNKMLSQREIDRQDRAQQDLYNAYNASTYAR >gi|257443281|gb|ACYG01000014.1| GENE 4 4153 - 4815 885 220 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0032 NR:ns ## KEGG: CCV52592_0032 # Name: not_defined # Def: Hit family protein # Organism: C.curvus # Pathway: not_defined # 1 216 1 230 232 112 41.0 8e-24 MTEQDAINALVGELEASEGQTEPQEAQGAEPTEGQKTEQPQLTQENLQNMIASAMQGIEE QKAAQEAEKAKAAEQAKAAQLPPEQQALLDSMGLQGMPQMQEQIRQLQEAQAQAQEAARK RAVFDKNLDQFTKDYPTIKPEEMGKWAEQNGFLPLLGESYDGWKAVANAMIKIATPTQKP DEIIDTNKSGGELGAFDRMKKGEDVSDVEIGAELLKQAGF >gi|257443281|gb|ACYG01000014.1| GENE 5 4818 - 5069 413 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459273|ref|ZP_05624387.1| ## NR: gi|257459273|ref|ZP_05624387.1| hypothetical protein CAMGR0001_2106 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2106 [Campylobacter gracilis RM3268] # 1 83 1 83 83 137 100.0 3e-31 MLSNTQKKVFDATISNLTSNKELEPILGSDAVRKFLVLLSIKYEEYLIAAQDENASDESR LRAMDKVKLIESFFEFFENYTGE >gi|257443281|gb|ACYG01000014.1| GENE 6 5059 - 6609 1804 516 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0034 NR:ns ## KEGG: CCV52592_0034 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 2 497 4 506 554 543 53.0 1e-153 MDRTAYLQELKTAAMDGYEHYKQGFKDLEEAYLLILRPELMESLQKRNKSKNYIPKLNSK AKRIYDGLTETYFNNDKFAKLEPYINSSDDVIDKWQAAIDHYAESINLYKTFAPIFLRAP FSASCAVKVYWSKDRAMIDEVSLQDLYFDPGARGLNDISYLVHRIYLSSEDILSYGKRGI FRIENKEAFADKKPYERFEIYEIYELRGGKWYVSSLYENELLRDLIELRDGQPFIVGYML PQIRCTDEEIYVSAYGEPALMSMLPLQNELNVNRNSITDVIRQQVAPKIILGKASMVERG ELESVGTPIYADQPSAVQVLPAGDIGGAMAALQVIENEMSEVSGVSPQQNGATTVRKETA TMASIMANEGSVRLQGYIRTFNETFFEPIFERLAFLVWKYADPIFFAGFGRGEVPSFKVN LNTGIGALNKEVQKQSLMDAAKMIGAQFGMCLQIGDQAGAAAMKEASKKLLLELLPLYGI KNASEFIGERSGLEQMILPPQIPPDINPMQGGNNAF >gi|257443281|gb|ACYG01000014.1| GENE 7 6602 - 6913 249 103 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0036 NR:ns ## KEGG: CCV52592_0036 # Name: not_defined # Def: putative resolvase # Organism: C.curvus # Pathway: not_defined # 20 101 6 87 93 69 41.0 4e-11 MTTTRGEKCELWVENALKTDYIFEKISPTLVRNLARLDDRALRLGIFVMICDLASGMKQM PTKIHKIRLAAELVRDGAKFKRVRELTGVSKSTYYKMKRIING >gi|257443281|gb|ACYG01000014.1| GENE 8 6894 - 8189 1372 431 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0037 NR:ns ## KEGG: CCV52592_0037 # Name: not_defined # Def: Ppx/GppA family phosphatase # Organism: C.curvus # Pathway: not_defined # 1 431 1 433 433 593 67.0 1e-168 MSELALDLRYTPQQKAVFFQNDARFCTIEKGRRFGFTKGTANACIEWLLEGQKILWVDTI AANLKRYFERYFLPELRQLPKELWNWNAQDKQLKICGGYLDFRSAERPENIEGFGYDTVI LNEAGIILKDPYLWDNAISPMLLDNPNSRAFIGGVPKGKNKFFDLAQRGMRNEKGWRNFQ FSSYDNPLLQKEEIDRLVAELGGADSDVARQEIFGEFLDTTSNSVFSLAAIEAAFRKQRY FDAGAPVIWALDVAREGDDESVLCKRQGDSVEPLKPYRIASTSELAREIYGEYERTDLKP HAIYIDTIGVGAGVFDTLCDLGLRGIVREAKGSFKASDERKYANKRAEMYFNLREKLPLL AIAPDEELKRQLQTIAFYFDKKERYLLMPKEGIKKEYGRSPDRADALAMSFFDLCPILPQ RKEQRYDDYAW >gi|257443281|gb|ACYG01000014.1| GENE 9 8182 - 8649 509 155 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0038 NR:ns ## KEGG: CCV52592_0038 # Name: not_defined # Def: GatB/Yqey family protein # Organism: C.curvus # Pathway: not_defined # 1 148 1 153 158 124 54.0 1e-27 MARITDEKREKIIADYKAGASKNSLALKYEVSIGAVFKICNGVERDLAPLVKAQVAINTE LADRSEKEVKAFHSAVDEATKHLIYFQNSALRNQKLANAALESAERLCDIEAHARITAKN KETVLGRMPETIIQNTNAQQTKIQITRREIGASDE >gi|257443281|gb|ACYG01000014.1| GENE 10 8737 - 8949 385 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459278|ref|ZP_05624392.1| ## NR: gi|257459278|ref|ZP_05624392.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 70 1 70 70 126 100.0 5e-28 MTKQEFVTKLKDLNLSVADFAEMVGLHPASVRSFNDEKRPVPDWIDSWMKNYEKARALDE LLALIEKFKK >gi|257443281|gb|ACYG01000014.1| GENE 11 9112 - 9405 480 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459279|ref|ZP_05624393.1| ## NR: gi|257459279|ref|ZP_05624393.1| hypothetical protein CAMGR0001_2112 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2112 [Campylobacter gracilis RM3268] # 1 97 1 97 97 192 100.0 6e-48 MKNLFWEQGVKAVRLLNGEEFSLGHNPAGIIVYDEDGEIVGLQSYDNAIFYPANIIKDVL VAEGQAWLSFDEFQLDCCFDFYNEFGGWDNTTYTKEI >gi|257443281|gb|ACYG01000014.1| GENE 12 9456 - 10328 485 290 aa, chain + ## HITS:1 COG:intR KEGG:ns NR:ns ## COG: intR COG0582 # Protein_GI_number: 16129306 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 77 289 175 405 411 81 28.0 2e-15 MTLASIARDYLEALGQINFEQSRAQKFAFSHTKYLPKDAACIKKVDIQRWLAGLEEGLAP STIKRVVLCWRRACEQAVEAGKLAKNPFLRAKYPKIPRSKTDPFSVEEVDLMLSKASGRL ESFLAFAFYTGARCCEILALCWDDIDTEAMSISISKSLTDGLVKPRTKTGEDRIVPIFAP LLPYIAQLEKHRDSEWVFSRKQDHLFGSTALFGNGRWRKFLAECGIPYRSARHTRHTFAT HMVERAVKGEIPLKWVSQILGHASLDMTIKVYARFLQNEHMKIDRSIALY >gi|257443281|gb|ACYG01000014.1| GENE 13 10311 - 10607 209 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459281|ref|ZP_05624395.1| ## NR: gi|257459281|ref|ZP_05624395.1| hypothetical protein CAMGR0001_2113 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2113 [Campylobacter gracilis RM3268] # 1 98 1 98 98 179 100.0 7e-44 MELYFSVLDHVAKGWESRPDDYYLTEISFLLREVFGSKLTDETVINSLRTCRTAKFEKEL GKILNTPKEALQWILDHRMREDRRKACEKRYKKSIKRD >gi|257443281|gb|ACYG01000014.1| GENE 14 10607 - 10957 335 116 aa, chain - ## HITS:1 COG:no KEGG:CLOST_1536 NR:ns ## KEGG: CLOST_1536 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 7 101 45 142 153 75 45.0 6e-13 MRIGRVSKYKAKKTAYGGAIYDSAKEAKRAAELELLQRAGKIKNLRRQVKFTLQDKFRYR GKTIRAIEYVADFVYEADGLIIEDVKGYRTPEYKIKAKMLKRLISCGEIDGEFVES >gi|257443281|gb|ACYG01000014.1| GENE 15 10923 - 11186 172 87 aa, chain - ## HITS:1 COG:no KEGG:Nitsa_1799 NR:ns ## KEGG: Nitsa_1799 # Name: not_defined # Def: hnh endonuclease # Organism: N.salsuginis # Pathway: not_defined # 3 84 1 85 91 63 37.0 3e-09 MRLSKAKFEKFKNFLAYEHPMCQICAQAPSVEAHHVKFGRYGADKDDKKIIAVCRACHQW CHAHKHESIKKYERLADENWASFQIQG >gi|257443281|gb|ACYG01000014.1| GENE 16 11186 - 11488 460 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459284|ref|ZP_05624398.1| ## NR: gi|257459284|ref|ZP_05624398.1| hypothetical protein CAMGR0001_2117 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2117 [Campylobacter gracilis RM3268] # 1 100 1 100 100 176 100.0 4e-43 MNEILNYAVYKLELDEIENSDDWFDANGRLKYKERFLFDALKEAGRIEASWLTALFANEQ DAIEFCEGAGLSSNSDYFYFCLRVEAAVSAGEGEYVEIGY >gi|257443281|gb|ACYG01000014.1| GENE 17 11485 - 12153 680 222 aa, chain - ## HITS:1 COG:RSc1982 KEGG:ns NR:ns ## COG: RSc1982 COG0863 # Protein_GI_number: 17546701 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Ralstonia solanacearum # 3 214 6 248 270 106 30.0 3e-23 MKLNKIYNTDCLEFMRSMPDSCVDLVVTDPPYEIHTKGGGLGKRPVYENGALSKISQGFD AEATLEQIARICKKINIFIFCSTKQKPRIMNWGYERDCNIAELAWYKPNAAPFTNNTFKS DLENIIYIREKGVKIKGISRLFTHNCGKSKYGHPTEKPLEIIEKLILTASNEGDLIFDPF MGSGTTAAACKELNRNFIGCEIESKYCEIAEKRLRKTIRGLL >gi|257443281|gb|ACYG01000014.1| GENE 18 12143 - 12754 504 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459286|ref|ZP_05624400.1| ## NR: gi|257459286|ref|ZP_05624400.1| hypothetical protein CAMGR0001_2119 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2119 [Campylobacter gracilis RM3268] # 1 203 1 203 203 363 100.0 6e-99 MSYKEKFINEILFQGRATPMQVKFLAEGALKNIADKDLGEFANFAFSLKTRYDNAIQTII NAANEYQRETTMRLLKRGCAFSDITTLKSFLEQYFKRKLIACGVYPFTCTSISMNEYGEF ISDTTKKAISAADEVVFLTALLKEQYAIGEYRGELLAQNIEIAQRNKAERFKEAPKIENN KKPITSENLIRLEEKVKVRSNEA >gi|257443281|gb|ACYG01000014.1| GENE 19 12751 - 13641 684 296 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0044 NR:ns ## KEGG: CCV52592_0044 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 5 92 1 91 282 92 50.0 3e-17 MSENLSGGYAICFNQWLFDERIQSELRLLLLITSLSAKEGYCYASNQYLAEKLNKSKDTI SAGITKLKKYGYIETEEEKFGAAIINRKIRVIVFERIAEFQSANGENKAADGKNKDANGK NSVADVKNSSDAYIGRARMNNTSQENYKPYELQALCVSASAAHERNEAPRSPKFQKPTIE QIRAYCKEAGKNIDAEAFFDFYEAKGWVVGRAPMKDWKAAVRNWAKNESQFLRRKVNSDG QEDEYADVPMFASDNPILKNNFLSRDMSVIYDKATQIAIEDERLRSSRQIEMKDHR >gi|257443281|gb|ACYG01000014.1| GENE 20 13638 - 14447 783 269 aa, chain - ## HITS:1 COG:SPy0980_1 KEGG:ns NR:ns ## COG: SPy0980_1 COG3617 # Protein_GI_number: 15674990 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Streptococcus pyogenes M1 GAS # 1 132 1 121 123 91 37.0 2e-18 MNLEIFKNSKFEIRGGLINGEPYFVANDISSLLGYANTYAMLERLDDDEKTNLKDLLKSR MPEISDLPRIDGVRYDAVLLSESGLYNAILWSEKPQAKEFRRWVTGEVLPAIRKHGGYLT PAKIEEVLSDPDTIIALAQNLKTERAKRKQLEAEKAANAGYVSFAKSVEASVDSILIGNY AKLLSDSEGVSIGQNRLFDFLRASGYLISGGARHNVPMQRYVDRGYFEVTTQTFAGPAGT HQKFTTKITGKGQIALAGKIVEYFKGERI >gi|257443281|gb|ACYG01000014.1| GENE 21 14534 - 14719 224 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459289|ref|ZP_05624403.1| ## NR: gi|257459289|ref|ZP_05624403.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 61 1 61 61 84 100.0 2e-15 MTDKEIVLELTKLAMQAEMLRSRPEDAPKMVAEAFNTIAESIEDAMSKLNDADIHLARNK K >gi|257443281|gb|ACYG01000014.1| GENE 22 14679 - 14849 115 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459290|ref|ZP_05624404.1| ## NR: gi|257459290|ref|ZP_05624404.1| hypothetical protein CAMGR0001_2122 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2122 [Campylobacter gracilis RM3268] # 1 56 1 56 56 89 100.0 6e-17 MQTTLNAYEKKAENKRFLKSLKKIVAELDKCTDRKDQAKMVEMIISYFELDGYLHR >gi|257443281|gb|ACYG01000014.1| GENE 23 14834 - 15016 182 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459291|ref|ZP_05624405.1| ## NR: gi|257459291|ref|ZP_05624405.1| hypothetical protein CAMGR0001_2124 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2124 [Campylobacter gracilis RM3268] # 1 60 1 60 60 67 100.0 5e-10 MKAKREIKKLKRAIKKLREEVDKLGGGASAIGFITEEYKDEEEDIDTQIRCRKDKKCKRR >gi|257443281|gb|ACYG01000014.1| GENE 24 15083 - 15292 224 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459292|ref|ZP_05624406.1| ## NR: gi|257459292|ref|ZP_05624406.1| hypothetical protein CAMGR0001_2125 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2125 [Campylobacter gracilis RM3268] # 1 69 1 69 69 115 100.0 2e-24 MVAPKYDNSKAFKLSNQNIAAIVKIQNKKGFKNDSEVVRFCIDFMAVLIERGLETQALAK LVESVANEK >gi|257443281|gb|ACYG01000014.1| GENE 25 15273 - 15527 160 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459293|ref|ZP_05624407.1| ## NR: gi|257459293|ref|ZP_05624407.1| hypothetical protein CAMGR0001_2126 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2126 [Campylobacter gracilis RM3268] # 1 84 1 84 84 146 100.0 4e-34 MEQIKITQSQIAKKLGVTQGAVSLWFLQINTPKVKHANAMQKHWGFPTQMWDDPKLFSSF MRKNSQKFGSLKILRKAKNGSAEV >gi|257443281|gb|ACYG01000014.1| GENE 26 15622 - 16401 1028 259 aa, chain + ## HITS:1 COG:no KEGG:AFE_0998 NR:ns ## KEGG: AFE_0998 # Name: not_defined # Def: transcriptional regulator, putative # Organism: A.ferrooxidans_ATCC23270 # Pathway: not_defined # 1 239 1 226 243 69 28.0 2e-10 MDIHQKIRAFRQEAGLTQVQFAEKLGITQGLVAHYETQPGEIGKNGKEKKSSKPELEKLP LIAEILGKNVIDLFDDEETSKRQIVKKELKNNFEKYAHLIPAEYGLKNVVFLSKSDMLIG AGSEGAYDLDLFNKETKIAVDRSFIKGLDPKNLKLFEVVGDSMQPEYDEGDLAIVDMVNF RGDFIKIGGIYVVRVGDVVYVKRVEFLPKGAIKLISLNSKYGDLYPHKEGYEYEILGKVC GKIKLEIQKGLTFSDSGIK >gi|257443281|gb|ACYG01000014.1| GENE 27 16403 - 16897 587 164 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0052 NR:ns ## KEGG: CCV52592_0052 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 2 160 6 168 173 121 43.0 1e-26 MLICAAVLFSGCVFNPAERDVAFMGGEAYYVPVESVGYPVTRDMEKYLKNIGIYFCTEGD AFWVSKYDFDRLKQAGSDYLLKDYFAKYLAGCAKPLTPQEAIALAGSSQGSYDWQDAGMA WQNAFYNNAAAAQDAANALEIENQKMRDRLWLQQQGRFHQIQGL >gi|257443281|gb|ACYG01000014.1| GENE 28 16916 - 17134 327 72 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1309 NR:ns ## KEGG: CCV52592_1309 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 70 1 72 73 67 45.0 2e-10 MKKLLALILAAFLLTPSVSFSAQRVGGYVTKKGKYVKPHYRSNKNRTQRDNWSSKGRSNP YTGKRGTKKPKW >gi|257443281|gb|ACYG01000014.1| GENE 29 17146 - 17598 263 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459297|ref|ZP_05624411.1| ## NR: gi|257459297|ref|ZP_05624411.1| hypothetical protein CAMGR0001_2130 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2130 [Campylobacter gracilis RM3268] # 1 150 1 150 150 283 100.0 2e-75 MKKVLLFILVLSSSLSAFCEKFYVTDEMTDKTTLYFVCKEKDVSLYLESKNGKVSYGGII GIVLKEPEQFWMEDSNGGVPTQKLEMRVDKNTMFTNTAILAASFQVATIRLSKSQQKQLR DGDILAVRYFLYPLERRLTRFDLADLKQFQ >gi|257443281|gb|ACYG01000014.1| GENE 30 17657 - 17803 79 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATNKKQTSKKVASEASEILKDDRYSEKSKSVAGSALSQTKPTPKKKK >gi|257443281|gb|ACYG01000014.1| GENE 31 18468 - 18809 268 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459300|ref|ZP_05624414.1| ## NR: gi|257459300|ref|ZP_05624414.1| hypothetical protein CAMGR0001_2134 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2134 [Campylobacter gracilis RM3268] # 1 113 63 175 175 226 100.0 4e-58 MKKLFFIANHPAPKELEAEYEVVALSDEQKRIWASIPKTEISTHIAGILKVARDFDAVVV VGEPRACHIVVSAVGKDRCFSTYSIRQSVDEPQPDGSVIKKAVFKFDGLVRYE >gi|257443281|gb|ACYG01000014.1| GENE 32 18821 - 19234 308 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459301|ref|ZP_05624415.1| ## NR: gi|257459301|ref|ZP_05624415.1| hypothetical protein CAMGR0001_2135 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2135 [Campylobacter gracilis RM3268] # 1 137 1 137 137 271 100.0 1e-71 MRTNLSKSGLPTLGVGGGAASNTAEFRVILNGEKRLKKPIFIARHGQLSCSSTQAIIALQ KGDYIVDVRFKRDASREAWECGEIRISAKRVIAVAKGVDEIEVEPAVISYDDIPEKCWEG GNVYHNRDGEYFAEVER >gi|257443281|gb|ACYG01000014.1| GENE 33 19231 - 19440 294 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459302|ref|ZP_05624416.1| ## NR: gi|257459302|ref|ZP_05624416.1| hypothetical protein CAMGR0001_2136 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2136 [Campylobacter gracilis RM3268] # 1 69 1 69 69 88 100.0 2e-16 MKNQELETAAAEIAGSVSDYLRSVAEHLCVISQMSGINISDLLINLALLARAAERKKESE NAAASEKAI >gi|257443281|gb|ACYG01000014.1| GENE 34 19619 - 20605 1184 328 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0054 NR:ns ## KEGG: CCV52592_0054 # Name: not_defined # Def: CAP-Gly domain-containing protein # Organism: C.curvus # Pathway: not_defined # 5 328 1 319 319 295 72.0 2e-78 MSETMELIVSYEAKTADSQILTTNFEEIKAGVAMQVEKYSIEVTDENIPEAKKVMANFNK VKTAIGDRYKFFIDKLSTPINQLKNEKKEIEAIITDGRQKIADGVAAFENAKLEQIAERI NEYARSLCDEKGLNCERINTADLIKLSAVTTAGSLAKPTKEAIEGKIAALENEILQAKLA EQEKQRRDAEIAERARKEAEERAAREKAEMEARAKAREAEILARAEREKAEAAQRAEREK QEAVEQAAREAAERAKTEANKQAFYEAQREVLQKPRDAGDGKVIYTIRAEFEVKAIANAS HEKLAAKIKEMLAAAGITNLSKIEVLNA >gi|257443281|gb|ACYG01000014.1| GENE 35 20598 - 21470 997 290 aa, chain + ## HITS:1 COG:no KEGG:Nitsa_1200 NR:ns ## KEGG: Nitsa_1200 # Name: not_defined # Def: hypothetical protein # Organism: N.salsuginis # Pathway: not_defined # 26 287 5 256 257 162 39.0 1e-38 MLEIDLGEQGVKHPLGTMIKGLPIKDYHARVEISKSDLDLLAKSPYHFKFKDEFEKPDSK ALTLGSAVHKLVLEPADFFKEFATEPKADKRTKEGKELYAEFLKGAEGKIVLDAEAYEKA TAIANAVNSMRETALFLKDGLAEQSYFAEISGVPVKCRPDFLNEALSLCVDLKTTSDASA DGFAKSVANFNYHIQAAFYTDILRLCGKRVDNFLFIAVETKKPYMTGFYALDEAAIEQGR KTYLALLERYKLCMERNEWWGYAKFEPESKEIEAVQTLSLPAWKFYESIA >gi|257443281|gb|ACYG01000014.1| GENE 36 21480 - 22466 1152 328 aa, chain + ## HITS:1 COG:ECs1933 KEGG:ns NR:ns ## COG: ECs1933 COG3723 # Protein_GI_number: 15831187 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli O157:H7 # 41 239 61 251 269 71 29.0 2e-12 MNQLQIREQDARELVRAKMDVIKTITGGDKAKMSAFAASLTAMASDPALSICSVQSVIGA GLEIVRLGLNPNKTFGQAYVVPFKNKAQLQIGYKGWLSLAYRNGWIFRALAAYKCDEFEI NFAGIKDDIEFSPNYDERDETNSLWVFNNLRGVIVYVKDAGGNEFSEFVPFKKLEQLRLK SQNQKDKEALTNIWGEWAEEMYKAKAIKYVATRLPITEQIQEAINAENEAYKEQPKLEPQ PQNLNEFLAKAAQKKAEPVEEIIEAAPLEIDVSEEVLPLDALQSELVARGVDEIEAEKRM ERLSPDEARAYLSDPNSIDALAEELRNE >gi|257443281|gb|ACYG01000014.1| GENE 37 22459 - 22935 574 158 aa, chain + ## HITS:1 COG:Cj1071 KEGG:ns NR:ns ## COG: Cj1071 COG0629 # Protein_GI_number: 15792396 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Campylobacter jejuni # 2 107 3 107 183 142 68.0 4e-34 MNKVVLIGNLTRDIELRYTQSGYCVGNAGIAVTRKFKNAQGETAEDTCFIDLKFFGRTAE VANQYLRKGSKLAVEGRLKLEQWQDQNGQNRSKHVVEVESLEMLGSNQNSGNYQNSGCGA QNSNGGSTQNYAQSSATQSRAGKPAADKYDDGNDTIPF >gi|257443281|gb|ACYG01000014.1| GENE 38 22946 - 23158 242 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNQLSLELEGIGVVAPALYKCKECKFSERWECNTKVVWYCSKIRSNRTDNKLLKIKANNA ACKLFLKDEL >gi|257443281|gb|ACYG01000014.1| GENE 39 23155 - 23319 208 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459308|ref|ZP_05624422.1| ## NR: gi|257459308|ref|ZP_05624422.1| hypothetical protein CAMGR0001_2142 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2142 [Campylobacter gracilis RM3268] # 1 54 1 54 54 68 100.0 2e-10 MNEVEWLNEHGGFDEWRAAAEAQWWEDYGADAAYDREIDDAEYFAERDPYVDER >gi|257443281|gb|ACYG01000014.1| GENE 40 23273 - 23794 573 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459309|ref|ZP_05624423.1| ## NR: gi|257459309|ref|ZP_05624423.1| hypothetical protein CAMGR0001_2143 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2143 [Campylobacter gracilis RM3268] # 11 173 1 163 163 292 100.0 5e-78 MRNILLKEIPMWMNAREFAKREDKKLYVIDVQASKDRKIGRTDRFRKLGGVLQIETEHYY LAFKDPITPALKERIERLYYKAIELVANDYELAWIAHKDTGSPHLNVLQRFLRFKWHRGG KIVQKMCENLEALLAMSEEARAEFLTRELEAMREAKKQKEVQSETIQRSFSKF >gi|257443281|gb|ACYG01000014.1| GENE 41 23760 - 24437 367 225 aa, chain + ## HITS:1 COG:no KEGG:CJE1421 NR:ns ## KEGG: CJE1421 # Name: not_defined # Def: site-specific DNA-methyltransferase # Organism: C.jejuni_RM1221 # Pathway: not_defined # 2 198 5 200 251 328 76.0 8e-89 MKLYNDHFQNFKRYGIPKAQLVIADIPYNLGNNAYASNPVWYVGGDNANGESKLAGKSFF DTDENFKVAEFMHFCSKMLIKEPKEAGRAPAMIVFCAFEQQAPLIELAARYGFAHYINLV FRKKSSSQVLKANMRIVGNCEYALIFYRDKLPKFNGGGRMRMNCIDWVSDDASVPKIHPT QKPVKLLEYLISLFTDVGGCSDRSACREWQHFSSGRKFRAQILRI >gi|257443281|gb|ACYG01000014.1| GENE 42 24522 - 25016 500 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459311|ref|ZP_05624425.1| ## NR: gi|257459311|ref|ZP_05624425.1| hypothetical protein CAMGR0001_2145 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2145 [Campylobacter gracilis RM3268] # 1 164 1 164 164 310 100.0 2e-83 MSMWYKTRIEISGLTLNQAAGIMARGKDFLGSIIPLPKTIELDENGFYKTEKDKEAAREF YDKERDCRFINCDWKYTVYPEYGGYRVLIEAQTEDIPKKEILKFIKEFEMEKEWQCIEFL VTSFWEEFDEGGDNWILRAEIISDEKQKLMMTEYAVKTPLTYVI >gi|257443281|gb|ACYG01000014.1| GENE 43 25028 - 25480 513 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459312|ref|ZP_05624426.1| ## NR: gi|257459312|ref|ZP_05624426.1| hypothetical protein CAMGR0001_2146 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2146 [Campylobacter gracilis RM3268] # 1 150 1 150 150 287 100.0 2e-76 MTTQEKIKVMQAYTRGEEIERRSANCEEDEWAFAGLPVWNWEKFEYRIKPKEPKFKVGDE IVCKSSRGIANPEVWCVGSPVIEGIDPDDFINVDDVLWYWEYQDVDGVWERTNARYTKSD LSKEVLGPNERETAMPLYALGFRLPEKIGE >gi|257443281|gb|ACYG01000014.1| GENE 44 25482 - 25721 151 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459313|ref|ZP_05624427.1| ## NR: gi|257459313|ref|ZP_05624427.1| hypothetical protein CAMGR0001_2147 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2147 [Campylobacter gracilis RM3268] # 1 79 1 79 79 116 100.0 6e-25 MFILTYIKAWGILMTPISYVWLFVWMAITGYFSKLSEKGSDTLALVFFISTILLVIGVSI WCWYIAGDVLNFFSGLKGE >gi|257443281|gb|ACYG01000014.1| GENE 45 25723 - 25977 198 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459314|ref|ZP_05624428.1| ## NR: gi|257459314|ref|ZP_05624428.1| hypothetical protein CAMGR0001_2148 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2148 [Campylobacter gracilis RM3268] # 1 84 1 84 84 134 100.0 3e-30 MLNFIFWGITLNCYAFTMYALALYSLSPYELQIKSKIKPLSLVGGIFTPYVMFIISIIVF VLIVYCRFDANKMDMIIQKMKDIK >gi|257443281|gb|ACYG01000014.1| GENE 46 25974 - 26138 225 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSPEREKEREMLAKIDDFAQKHNEKGALVEKIHKRLFELNLEQLKEILKRIEK >gi|257443281|gb|ACYG01000014.1| GENE 47 26135 - 26488 158 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459316|ref|ZP_05624430.1| ## NR: gi|257459316|ref|ZP_05624430.1| hypothetical protein CAMGR0001_2150 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2150 [Campylobacter gracilis RM3268] # 37 117 1 81 81 128 100.0 1e-28 MNEILLLLYLADLSDKMCILLAVCGILLFSLVLFLFMFADIGIGDRTKKIVWHGIKLSIA IIILSFLYPSKNTLYIAASAKAGQIGIEKLQGSDTFSKALKLLDKKLDEALAEEKNG >gi|257443281|gb|ACYG01000014.1| GENE 48 26481 - 26657 239 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459317|ref|ZP_05624431.1| ## NR: gi|257459317|ref|ZP_05624431.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 58 1 58 58 77 100.0 3e-13 MDDKFITKAEALKELGLKSQMSLYRLTKAGKIVANKVNAKVIYYSLSSIKAYKAGKSA >gi|257443281|gb|ACYG01000014.1| GENE 49 26654 - 27805 503 383 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239524421|gb|EEQ64287.1| 30S ribosomal protein S15 [Helicobacter pullorum MIT 98-5489] # 18 383 13 387 391 198 35 4e-50 MPKLSVPLTATQLKNLKPKDKPYFVGDGSNLLIKIMPSGAKFFIYEYKQGAKYKRVTIGR AGEMSLAEARQRKSELKTRVKTSDKITFREVFEEWIKTKSKISPKQLFWINRRFESLLLP ALGSMQIADIGRKDIIGALSPLLSDEKQETAKKVLGALNGFYKFALLHEYVDHNIIADID KATLIGRRQIRHFAYFKDEAEIRNLIKAVKGYFGNERIKVCALFMLYTAVRGENARFATW DEIKGDMWKIPASKMKNGKDHEVFLSSSVRRMLSDYRASSPLQSEFIFPSIKSNVRPISD NTVRSMLRNLGFSNEMITPHGFRATFSTICHEKQDEHGQNSDVIELCLAHVEKNKVKDAY NHAKNLKQRAALMQWWSDFLDGL Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:55:01 2011 Seq name: gi|257443248|gb|ACYG01000015.1| Campylobacter gracilis RM3268 contig00013, whole genome shotgun sequence Length of sequence - 25833 bp Number of predicted genes - 30, with homology - 28 Number of transcription units - 14, operones - 5 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 69 - 809 275 ## CHAB381_1200 hypothetical protein + Term 965 - 998 -0.4 - Term 920 - 955 -0.8 2 2 Op 1 . - CDS 962 - 1399 459 ## CHAB381_0498 hypothetical protein 3 2 Op 2 . - CDS 1410 - 1745 457 ## CHAB381_0499 hypothetical protein 4 2 Op 3 . - CDS 1766 - 2863 1353 ## COG1186 Protein chain release factor B 5 2 Op 4 . - CDS 2922 - 3113 206 ## 6 2 Op 5 . - CDS 3143 - 3418 112 ## gi|257459325|ref|ZP_05624438.1| hypothetical protein CAMGR0001_1731 7 2 Op 6 . - CDS 3418 - 3717 432 ## CCC13826_0651 hypothetical protein - Prom 3756 - 3815 3.5 + Prom 3793 - 3852 9.0 8 3 Op 1 . + CDS 3883 - 4704 966 ## COG0414 Panthothenate synthetase 9 3 Op 2 1/0.000 + CDS 4706 - 6241 1539 ## COG0621 2-methylthioadenine synthetase 10 3 Op 3 . + CDS 6247 - 7248 806 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 11 3 Op 4 . + CDS 7245 - 7901 565 ## COG4186 Predicted phosphoesterase or phosphohydrolase - Term 7990 - 8024 1.4 12 4 Op 1 . - CDS 8133 - 8888 798 ## CHAB381_0503 hypothetical protein 13 4 Op 2 3/0.000 - CDS 8935 - 9423 518 ## COG2121 Uncharacterized protein conserved in bacteria - Prom 9477 - 9536 5.1 14 4 Op 3 . - CDS 9566 - 10861 454 ## PROTEIN SUPPORTED gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase 15 4 Op 4 . - CDS 10858 - 11100 361 ## CCV52592_0261 hypothetical protein - Prom 11128 - 11187 7.2 + Prom 11144 - 11203 8.4 16 5 Tu 1 . + CDS 11259 - 12386 416 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA + Term 12389 - 12417 0.3 17 6 Op 1 . - CDS 12687 - 13223 418 ## C8J_0190 putative integral membrane protein 18 6 Op 2 . - CDS 13280 - 13663 498 ## C8J_0191 hypothetical protein - Prom 13706 - 13765 3.0 + Prom 14050 - 14109 4.0 19 7 Tu 1 . + CDS 14129 - 14551 387 ## COG2510 Predicted membrane protein + Prom 14603 - 14662 9.8 20 8 Op 1 . + CDS 14697 - 16205 1332 ## COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs) 21 8 Op 2 . + CDS 16202 - 16624 470 ## NE0122 hypothetical protein 22 8 Op 3 . + CDS 16621 - 17265 524 ## COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 23 8 Op 4 . + CDS 17262 - 18167 359 ## UMN179_02285 CRISPR-associated RAMP protein, Csm4 family 24 8 Op 5 . + CDS 18145 - 19263 697 ## THEYE_A0637 CRISPR-associated RAMP protein, Csm5 family 25 9 Tu 1 . - CDS 19234 - 22635 2338 ## Nitsa_1158 hypothetical protein - Prom 22664 - 22723 2.3 26 10 Tu 1 . - CDS 23080 - 23238 67 ## - Prom 23317 - 23376 3.5 27 11 Tu 1 . - CDS 23430 - 23597 195 ## gi|257459348|ref|ZP_05624461.1| hypothetical protein CAMGR0001_1754 28 12 Tu 1 . - CDS 23843 - 24910 584 ## CFF8240_0992 hypothetical protein - Prom 25054 - 25113 2.9 29 13 Tu 1 . - CDS 25168 - 25365 186 ## gi|257459350|ref|ZP_05624463.1| conserved hypothetical protein - Prom 25385 - 25444 3.5 30 14 Tu 1 . - CDS 25466 - 25831 491 ## gi|257459351|ref|ZP_05624464.1| hypothetical protein CAMGR0001_1757 Predicted protein(s) >gi|257443248|gb|ACYG01000015.1| GENE 1 69 - 809 275 246 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1200 NR:ns ## KEGG: CHAB381_1200 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 246 6 242 242 118 36.0 2e-25 MENFNKQQTRDYDKDPIILKNYEYLYQKLLMVFSLFIGGVFAIIVNFDWKTSDAVDYSVK DSIYMILFLSFLSLFIILPELIDYRKKRPTIRLKNNQIEFYEKDKIAYVEQCENLQHNMD WSFFIGNFKGKRGLLYMFMAVLLCLVFMTIDLVAARWFLSFALFQFAGNILVKFIFCLVL GKSGDRRFSLFPALRVGEPHYGHIGLFACSRYYLIPIFRNSIYFELKEYFLTRHNININD VDKIYL >gi|257443248|gb|ACYG01000015.1| GENE 2 962 - 1399 459 145 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0498 NR:ns ## KEGG: CHAB381_0498 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 143 1 148 150 107 43.0 1e-22 MKKILALIAAGVFLAGCVSNAPKSAVDAPKSGKYSFADVQDGIRAMNLQGSVVQSDACKN GNGAMCLNFADSMYSKHDYASAANAYNAACTLSQNFPACQKLAAMFEKGEGVEQNKFNAI DLYRISCYYGYKDACANMRRLGYNG >gi|257443248|gb|ACYG01000015.1| GENE 3 1410 - 1745 457 111 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0499 NR:ns ## KEGG: CHAB381_0499 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 106 1 106 107 144 69.0 1e-33 MSEDGILLALGYSVNDATVAQLRGILSKCDFEDNELDRIVGLNDKLKIYGAHVAMSNSNP YFKIKNDATNEERKTAAEEIIRSWSEKFKLKLQKVAGKETYYVLGRQISKN >gi|257443248|gb|ACYG01000015.1| GENE 4 1766 - 2863 1353 365 aa, chain - ## HITS:1 COG:Cj1455 KEGG:ns NR:ns ## COG: Cj1455 COG1186 # Protein_GI_number: 15792772 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Campylobacter jejuni # 1 361 1 361 365 536 78.0 1e-152 MDNYEYTELLKTLSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKT KISNILNKFLNAKNAVDDAKALYELANSENDEETINSLFAEADELEDKIINLEISMMLSG ENDDKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSF IVRGENAYGYLKAENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRV DVFRASGAGGQHINKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELM KQREKDENAPKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVLI SQANR >gi|257443248|gb|ACYG01000015.1| GENE 5 2922 - 3113 206 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLEDKKADCKKLKLEEAKLKLLLNDPLPDLSTELKLINHGNIKQVLISLIDKCFIIPALN KIL >gi|257443248|gb|ACYG01000015.1| GENE 6 3143 - 3418 112 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459325|ref|ZP_05624438.1| ## NR: gi|257459325|ref|ZP_05624438.1| hypothetical protein CAMGR0001_1731 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1731 [Campylobacter gracilis RM3268] # 1 91 1 91 91 139 100.0 6e-32 MAGISEFIVSVVELVDAQASDIRRSFLKSANSVLLNIITGVICIIGLVFFLLGLHALLEK TIGEIWAYFACSLAAFLCSIIVYKVLSCKAK >gi|257443248|gb|ACYG01000015.1| GENE 7 3418 - 3717 432 99 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0651 NR:ns ## KEGG: CCC13826_0651 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 99 1 99 99 124 83.0 1e-27 MATQETNLDSLKKDIDSLKADFKEIMKSIKNIGAERAESAKDKILDQLNSNEIKKYIDDL RLKGKDGIESVNDTIKQDPIKSIAIAAGVGFLLAWLLKK >gi|257443248|gb|ACYG01000015.1| GENE 8 3883 - 4704 966 273 aa, chain + ## HITS:1 COG:HP0006 KEGG:ns NR:ns ## COG: HP0006 COG0414 # Protein_GI_number: 15644640 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Helicobacter pylori 26695 # 1 273 1 276 276 249 44.0 3e-66 MQIIRSVEELKSFRAAASGSVGFVPTMGALHAGHASLIKRARNENDIVIVSAFLNPAQFL PGEDLNSYPKNEAGDIKICESLDVNAFFIPTADEIYSTEEPAIIAPKPISEILEGKTRPG HFDGVLKVLNKLFNLTRPSNVYMGKKDTQQLFIVQKMVKSFFMPINIVPCEIVRESDGLA LSSRNAYLDEEGKLMALKLSRSLLNASSLIKKGEISINIVREKMLNVLEPLAVDYIAFVD YKFNEISQIKQGDTIILLAAKVGTTRLIDNIWL >gi|257443248|gb|ACYG01000015.1| GENE 9 4706 - 6241 1539 511 aa, chain + ## HITS:1 COG:Cj1454c KEGG:ns NR:ns ## COG: Cj1454c COG0621 # Protein_GI_number: 15792771 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2-methylthioadenine synthetase # Organism: Campylobacter jejuni # 1 208 1 204 439 298 72.0 2e-80 MAKLHLVSLGCNKNLVDSEIMLGRLQNYELTDEPASADVMIVNTCGFIASAKQESIRAIL KLSEQKKSGALLVVTGCLMQRYKDELMRELPEVDIFSGVGDYDKIDEMILKKQNLFSPQT YLQSPALTSSRVITGSNYHAYVKISEGCNQKCSFCAIPSFKGRLKSRSIDDIEAEVRGLV ARGFYDFSFIAQDSSSYGRDLRRSKKDGANFNGSEDELNFAGLRDGENFNASCCEQNPNS SNGDAADGISAQSRLVCDKDSGGESADADDERVHEQDIDLVALIKRIEKIKGVKVARVLY LYPTSTDERLIRTIVSSPVFANYFDMPIQHINDKMLSLMKRGAGAARIKELLSLMREAPN SFLRTGVIVGHPGEGEAEFDELCAFLREFKFDRISAFAYSKEEDTASFAMPQILARTISR RLNKIEKITREAIDNSMRALVGKKMPLIIEGASSEGEFFYGAKPLAWDKDIDGEILINES YVQNLKVGGLYECEITEFAGDRLLARVLRSS >gi|257443248|gb|ACYG01000015.1| GENE 10 6247 - 7248 806 333 aa, chain + ## HITS:1 COG:Cj1453c KEGG:ns NR:ns ## COG: Cj1453c COG0037 # Protein_GI_number: 15792770 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Campylobacter jejuni # 6 327 2 317 321 248 43.0 1e-65 MKNPPEIPSKILALLRAGKNLLAFSHGVDSTALFYLLDEAGVKFDLAIVDYNVRAQSKDE VASARYLAVKFNKQIYVKSVRLGASNFEHEARAARYDFFAEICRERGYENLILAHQFDDK FEWFLMQLGRGAGLSELLGMQELEASEDYVIARPLLGVRKCELERFLRERNLKYFTDETN LTDRFKRGFIRAKFSEPFLNECFGGVKKSFEFLATDALSLTPEISNPAPKIYLVKRGTSE LRGVSLTCKRLGLVLSSAQRNECARCLENGADCVLGGKVAVGAGENFIFVTPYIKATMDK KFKEACRTLKIPPINRGFLFAAGADLALFEELL >gi|257443248|gb|ACYG01000015.1| GENE 11 7245 - 7901 565 218 aa, chain + ## HITS:1 COG:SMb20398 KEGG:ns NR:ns ## COG: SMb20398 COG4186 # Protein_GI_number: 16264132 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Sinorhizobium meliloti # 3 166 2 149 164 78 32.0 1e-14 MSVYFTSDLHFGHELVLKKYPNFRKGANVAEMDENLIAAWNALVTPEDLVYNLGDVSFHK DFAHTCELLRRLNGRHFLVLGNHDGRIAAMKNELLSGRKADGNFMFEQIVGYAFVRLSHK RAALSHYPMIEWANCHYGALMLYGHLHADMAEVSGRALNVGFDLHGKILSEDEVWSYLKD IPPKAHHASELEGISENDDMEQRRALIENFLRKINRDS >gi|257443248|gb|ACYG01000015.1| GENE 12 8133 - 8888 798 251 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0503 NR:ns ## KEGG: CHAB381_0503 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 249 1 245 247 161 40.0 2e-38 MALFKAKSFLGVAKSVDACEFFYRKLGFGKRILDEKSDRFPIAQENDLATSLAGFADLSD KNLISCVLIDDENQRVHFNEDYMIKENSIYQKVDDSFIVEFPRASAQAADETFGIEFNSH ASLFKILYFLLKNQSDFENMAMFALKFNNRACFVVANQERVLYADIMRIDEEMQAAMSDA DELFYELLNFQIETFYKSENSEFLTNVFIYSDGTLSNEIGYVIFTRIFIKTNLINLNFAD YINKIAMLEAR >gi|257443248|gb|ACYG01000015.1| GENE 13 8935 - 9423 518 162 aa, chain - ## HITS:1 COG:Cj0457c KEGG:ns NR:ns ## COG: Cj0457c COG2121 # Protein_GI_number: 15791821 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 146 50 192 209 163 50.0 1e-40 MMSFAYRRWWLRDFGKRRAKVIISDHKDGEIITRVISHFGIGAIRGSSFKGGARALMGAI KEIKNGTDVIITPDGPRGPFHSVADGAVILAQRLNLDIYALNYEASSFWKFRSWDEMLLP KPFSRINYSLSAPLNLAGLSLDAGKEAIRQLLFASAEQDIKF >gi|257443248|gb|ACYG01000015.1| GENE 14 9566 - 10861 454 431 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase [Veillonella parvula DSM 2008] # 1 387 1 394 449 179 30 2e-44 MSKLLFIQTLGCAMNVRDSEHIIAQLKEQDYEITDDVNIADLILINTCSVREKPVHKLFS EIGAFDKARKKGSKIGVCGCTASHLGGEIFKRAPFVDFVLGARNVSKISQAVRTPKFIST DINYDESEFAFGDFASSPYKSFINIMIGCDKKCSYCIVPQTRGDEISIPAQIILREAERS AARGAKEIFLLGQNVNNYGKRFSNAHEKIDFSDLLMRLSKIEGIERIRFTSPHPLHMDDK FLDVFCNNPKICKSMHMPLQSGSSKVLRDMKRGYTKQWYLDRALKLRQSCPGVAISTDII VGYPSESEDDFAETMEVLEAVRFEQVFSFKFSPRPLTPAASLKPLDDEISSERLSRLQNA HAKILDEIARAQKDKIFDVYFEELREGGTACGRSFSNFLICAQGGEELLGKTRGVRIEKT ARMALYGKVIA >gi|257443248|gb|ACYG01000015.1| GENE 15 10858 - 11100 361 80 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0261 NR:ns ## KEGG: CCV52592_0261 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 80 1 80 80 101 63.0 1e-20 MQLKLARTELASKPKSVKIEDLQAQVEKSGQKIFYLDRENSQKDLAALVDFFDTKGFSVY QRIVRYGLNENEYMYEVHIL >gi|257443248|gb|ACYG01000015.1| GENE 16 11259 - 12386 416 375 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 3 368 9 362 537 164 29 4e-40 MEKITDIIESIANEKGLEPADVKERVKTAFIQTAKRLFGEEYLYDSEVDPQTKRVKLYQK VHVVADDDERLGDHNFIALSEAKKIGENAEIGDELSYEINIENLGRTASGVLARELNFHI QRLLEEKIFENYKSKVGTLTHGTVTKIDHDGTTYVEIEDTKAFMPLKNRIKGENFKVGDV LQAVIKNVAIDKSHGIRLELSRTSPKFLEALLAAEVPEIKDGSVIIQACARIPGRRAKIA LSVVSPNVDPVGATVGKGGARIDAVSKFLSKNLQDGSGGESIDAFEYSASPEILITRAMA PAIVNSVKITQDGKAIVYVNPDQKSKAIGKNGLNIRLASMLCGCEIELIETGSASEKKVS KEEGLKNLEALFGEL >gi|257443248|gb|ACYG01000015.1| GENE 17 12687 - 13223 418 178 aa, chain - ## HITS:1 COG:no KEGG:C8J_0190 NR:ns ## KEGG: C8J_0190 # Name: not_defined # Def: putative integral membrane protein # Organism: C.jejuni_81116 # Pathway: not_defined # 19 177 57 215 219 88 32.0 9e-17 MLTRASAAKEPLRVPDEILSNLRTGDLVFRMGDVTDSRIIATATDFKYSHVGMIVRERPL LVVHAVTGEGEQDGVATVSMREFLEHVRDFGAVRMKFLSEEQKARLADSLLRRVGEDFTL RPRGEANLYCTTLLEQEISKITEFSPQYFKLSLAVLGGEYLAPKAFWHYGGVEILYER >gi|257443248|gb|ACYG01000015.1| GENE 18 13280 - 13663 498 127 aa, chain - ## HITS:1 COG:no KEGG:C8J_0191 NR:ns ## KEGG: C8J_0191 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_81116 # Pathway: not_defined # 5 127 8 128 129 72 34.0 5e-12 MKKFLLALIAIFVLAGCGSDPKGVAEDFVRALYEGDSKTLVNIIDIPDKDRSDDGAMQMI NGKLMQMAGAGKEEASKRGRLKSISGELQNSDEKSVLVKVAVSFKNGTNRTEGVKLVKKD GKWKVSL >gi|257443248|gb|ACYG01000015.1| GENE 19 14129 - 14551 387 140 aa, chain + ## HITS:1 COG:NMB1840 KEGG:ns NR:ns ## COG: NMB1840 COG2510 # Protein_GI_number: 15677676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 4 140 6 142 143 151 65.0 4e-37 METWAAWALASALFAALTAIFAKIGLEGINSHFATFIRTIIIALCLAIFLRYAKAWQPLS SLTPRNWVFLILSGLATGASWLAYFKALQIGKAYQVAPIDKLSVVLVVIIAVIFLGERPS LREWLALALIGAGVIMLAFK >gi|257443248|gb|ACYG01000015.1| GENE 20 14697 - 16205 1332 502 aa, chain + ## HITS:1 COG:MTH1082 KEGG:ns NR:ns ## COG: MTH1082 COG1353 # Protein_GI_number: 15679093 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HD superfamily (permuted catalytic motifs) # Organism: Methanothermobacter thermautotrophicus # 34 437 241 745 822 103 23.0 1e-21 MSKFSDFFNSEFKELEQSFRITDIDNILNDEMYLIAGDFYGIQKFIFENINTKNAAKILR AKSAYVQLFTKAIAKFICFKLKINESKILSISAGKFEILIPKQNFTQDTFNYIKRNVDKF FIDKFSAIAGMSLVALDCKKSDFSDMDSYKEFRERVSDAFELEKLNKFDLLNQSAIVLNY ADIIAIENGFERLGAKLADTKTSKISLDELGIDLEGFNCELELDDRIKSYVFKKDGQTAS FNELAQLACNKMHEDEPSGLKAIAVLKADVDGMGDFIKNSNVTNSFDSFDMFSKGLDSFF SIYIPRLIKQNFPHTYIVFSGGDDLLLVGAWDTVLDIARFIDDEFKKFISDKTLSLSMGI CIAKPSVPIKYLAELSENQLELAKEFKDEKGIKKDAITLFGQTARWSEYKTMYALITNTL ESIEELNTAFLYHLLELCDMAKSAKANDAISNIWASKLNYLIVRNLSKDSQWLIQKLQNA LEKSPEQVKMALCEFIYKRRAR >gi|257443248|gb|ACYG01000015.1| GENE 21 16202 - 16624 470 140 aa, chain + ## HITS:1 COG:no KEGG:NE0122 NR:ns ## KEGG: NE0122 # Name: not_defined # Def: hypothetical protein # Organism: N.europaea # Pathway: not_defined # 39 135 26 124 128 75 38.0 5e-13 MNYAHNGQQRKSYDNSKADKSGILYEKITLDYIKDGELFNETAKKTANSIRTSQSQIRRF YDYVLDLCEKAKTKNSSEILPFVKMLNSKVAYASSRKNVSKNFVEFIKDCVSQVDSVEKL EVFKLFFEAVLGFSKDKEER >gi|257443248|gb|ACYG01000015.1| GENE 22 16621 - 17265 524 214 aa, chain + ## HITS:1 COG:MTH1080 KEGG:ns NR:ns ## COG: MTH1080 COG1337 # Protein_GI_number: 15679091 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) # Organism: Methanothermobacter thermautotrophicus # 2 207 5 211 245 113 40.0 3e-25 MKIYSLKGDIRLLSGLHIGGGDDVMKIGGIDNQVIKDANSGRPYIPASSLKGKIRSLLEW DLGLVGLDQDKKGAPFSYKNIERAKDRKSAEILLKLFGDSDVKENKFGITRISFSDCRIS PESEDKILSEAKYENIIDRQKGTAKHPRQSERVPEGIKFCYDFKIKVLEGDDIDDFKKLI KRGLNLLENDYLGGSGSRGYGRVEFSNKDEWVEK >gi|257443248|gb|ACYG01000015.1| GENE 23 17262 - 18167 359 301 aa, chain + ## HITS:1 COG:no KEGG:UMN179_02285 NR:ns ## KEGG: UMN179_02285 # Name: not_defined # Def: CRISPR-associated RAMP protein, Csm4 family # Organism: G.anatis # Pathway: not_defined # 1 288 1 304 314 186 35.0 1e-45 MKLLKTTITPTSSFATSLKGDTLWGQICWAIRYRYGEARLESLLENYDKEPFLIASDGFL SGFLPKPCLPLSVFGKNIDKKAIRKKIWLKADDFAEGKFQNALAGDELESKIKQNATIKN SINYATFTTDADEFAPFALIETALPPLDIYFLIDENAFSQEELKAVMHDIGECGYGKKAS IGKGRFKIDKFENLNTPASKIFMALSPFVLQGSDLAIKKCFYEPFTRFGKHGGDLASSSD VTKKPVLMAQTSALIALEDESNIQFIGKSIRGVSTHKKSVQQGYAILIPTKWSGNELCKT L >gi|257443248|gb|ACYG01000015.1| GENE 24 18145 - 19263 697 372 aa, chain + ## HITS:1 COG:no KEGG:THEYE_A0637 NR:ns ## KEGG: THEYE_A0637 # Name: csm5_2 # Def: CRISPR-associated RAMP protein, Csm5 family # Organism: T.yellowstonii # Pathway: not_defined # 7 367 3 360 361 113 29.0 1e-23 MSFVKHYKLKIKILSPVHIGSGEIYEPTGYVIEKILQPSRKEIDALYEFDTMALYEILSE TDKEKFLDLVEASDENGLIKMQNFIFAHKKQGRQVAYKIVKVSPNAAQEYYDKIGKVVQK ESGKNNVINQLEIYKCVSNKNQKRDSAILTGSSLKGAISTAYQELLVKEGIKYHDVRDLL LSPSDGNPFKNLLISDSGGLASKIYSTANVKRELKNDDIKYNDSLSTRLEAIVSNVTCEI PLSIKQNSTEEPLDINRLIKACNDHYEPIFRSLFNDDGVLECLSEKFYESYKDFGRSNLA PNQFLLRIGRHSGARAVTIEGKREISIKQGVGKNPIIKEAETTTWLAKVKDQIEAGCVPF GWLLCEVNEIKS >gi|257443248|gb|ACYG01000015.1| GENE 25 19234 - 22635 2338 1133 aa, chain - ## HITS:1 COG:no KEGG:Nitsa_1158 NR:ns ## KEGG: Nitsa_1158 # Name: not_defined # Def: hypothetical protein # Organism: N.salsuginis # Pathway: not_defined # 963 1126 1002 1165 1645 77 32.0 5e-12 MAGELGLRALGAGADALGFDNAGKSLKDTADDLGQTFSQSAEAVGQTGGAGTTRIIGRGL KNFVTGQAAANQKLARGINNVLADTADFYGADRARDFFRQNSNLASSAINKIENFGDNDM KGWQAAGEIADATALAPAMLGHSAKAARLAKALGASEKVATRIGNAAGSAANGAIMGGFT GGARAYGQEKPGLKQAGLESTIWGGANAILGGLSRAPLAKIGARKLEEARVAAQELKPEA SPAKAAQDIQSATPAGQTAGEGFTMNGGTTPYQYAEQKFKPEEWVNNLSGVLSDEWAANL KSLAVKHPEMFKSEADVFRVIKQIKDNPTHFLENTNENTALIAKRLGENKAGNIGIDKSS GKIIHANKTDEHDLDRLIRRARGLEQDRGKGVPTPAGTTAPQTRADGELLSPSSDNTIIP QNSIAEGILNNPNLFGLDENVIKAIRSELEEAAGIAPKKMSEAVKGADKAETAAAQAPNP FLDEILRATNPANNNAYLDQILAITNPKAVIAAKKGSPTTQTITSTLNGSDEAAKKGLNP NSSLYSKDKYIKGSGTNSAITSTSDIFDGGVGSTTHITTTPANDEIISLSSDKNLNAPAE FKNSAGGGIDPAAVVRNIAERGDLALRLEPKADVLSLVRDFQAPIKTPIFEAKIAIDKML NHLADKAGSERRLEYVNLIKPTLENPLFIAKDGERYRFFKTFIDDRDKTLKFLSVIENDR GEFLGVTATPLKNTDLKNLIRKGNIVWGGDTLSSLSTPQAMRNQGLDTATDIIPQNGENM IKGFSSSAIPANIASAGAGAATGAALDDKNRARGAFIGALGGLGLVNAPALVSKLKGGAK VGEIAQDIEAAAKDKPSILSNMRSYLKAVGANSASELKDLSGKDIGLSYARQMASEHINK EFKNIAYEILSGSQSLAQNLKNGAINAARFVRRALSETKGADYLLRNDELFSAKSAYSAK MENLQSALSGLDDADRVAMHEYMVGEANAIKPELKPLADALRRQIDDMSAKLVDLGVLDK ASRDALAGQYLARSYEKHLKDRINSVFSSGKKVDEIHSRGFAFKEFKNREAMDKFLSKNP QIAKSMDQAYNKGGVRVVEKPNGKIELWRDYTKDERSAMGEIKRLAFYLIYLT >gi|257443248|gb|ACYG01000015.1| GENE 26 23080 - 23238 67 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAITSTGFQAPATKREKFKFCSSTIIRYIANLILHLILILLKDYLLDIFLNN >gi|257443248|gb|ACYG01000015.1| GENE 27 23430 - 23597 195 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459348|ref|ZP_05624461.1| ## NR: gi|257459348|ref|ZP_05624461.1| hypothetical protein CAMGR0001_1754 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1754 [Campylobacter gracilis RM3268] # 1 55 1 55 55 74 100.0 2e-12 MAQWQSEISKAKDDWNGLKRLMDQIKQNETLGKNERAKLYVDISDRLKELREAER >gi|257443248|gb|ACYG01000015.1| GENE 28 23843 - 24910 584 355 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0992 NR:ns ## KEGG: CFF8240_0992 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 264 344 355 431 1185 103 65.0 1e-20 MTSEVKTANNKEATPLLDQKLIERANENSQFNRGNIIESNLRKTLNSIDDLEISEAKKEM AKKKIIVETQRELKAAADFIPANVLGAAGFNVKKAGKQLDRITKAQEKKAEIIERAGEKN SRFNSFNADIADSEFIKIGNYVTLSGKPKIAVSFRTIPDGSVRLALKKKGFFYDNGISAW SIEPEKFDKSWISGRLSQLFNKDESTLNLKAMTKNDDPFALLPNATATRLRKMRRDASEK DIPDHLINDKSWYDKYVVKYNKDRKTLEKALNIAPIEKFGINYAEFYHDGSGAVKKLLAE RQGQVAGAFYRKDLGDVDIIWGEAKQNAKGGWDGYGLAKIEKKHPEISAQILEIR >gi|257443248|gb|ACYG01000015.1| GENE 29 25168 - 25365 186 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459350|ref|ZP_05624463.1| ## NR: gi|257459350|ref|ZP_05624463.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 65 26 90 90 123 100.0 5e-27 MFSGRPTNVFKLIREIKENPTHFYANNRLDYGLIVKRLDGNKIGKLAVEKQTGDVKHATK VNDKT >gi|257443248|gb|ACYG01000015.1| GENE 30 25466 - 25831 491 121 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459351|ref|ZP_05624464.1| ## NR: gi|257459351|ref|ZP_05624464.1| hypothetical protein CAMGR0001_1757 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1757 [Campylobacter gracilis RM3268] # 1 121 1 121 121 177 100.0 3e-43 NAGDLEGTIKNIEAIPTEGLDSATKDGLNKFVKEVIPEIRQILKTQEDDAVRAKFNPEEL KKALIDLNLTMQEKVNLVEMAKKQIKEELDKKAAKVAKGELAKQGEGFMMKDSGVAKSDR L Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:56:33 2011 Seq name: gi|257443245|gb|ACYG01000016.1| Campylobacter gracilis RM3268 contig00037, whole genome shotgun sequence Length of sequence - 3902 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 29 - 1697 93.0 # CP000776 [D:55542..58435] # 23S ribosomal RNA # Campylobacter hominis ATCC BAA-381 # Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter. + 5S_RRNA 2125 - 2237 92.0 # CP000767 [D:835133..835251] # 5S ribosomal RNA # Campylobacter curvus 525.92 # Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter. + Prom 3143 - 3202 7.4 1 1 Tu 1 . + CDS 3437 - 3902 509 ## COG1555 DNA uptake protein and related DNA-binding proteins Predicted protein(s) >gi|257443245|gb|ACYG01000016.1| GENE 1 3437 - 3902 509 155 aa, chain + ## HITS:1 COG:Cj0011c KEGG:ns NR:ns ## COG: Cj0011c COG1555 # Protein_GI_number: 15791410 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Campylobacter jejuni # 9 80 7 78 79 73 56.0 2e-13 MKNLFKSALFLSLPAFMLAAVNLNTASKEELMALPGIGEAKAQAIIDYRKDNKFKDIEDI KNIKGIGDKRFELIKDDLAVSGTTDISDLKSVKQKASKKAKDTAKSAKAKANTKSEKMQE KMDDSMDKAMNEDGKVKNSTAKLKDEAKEEGSSKA Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:56:40 2011 Seq name: gi|257443208|gb|ACYG01000017.1| Campylobacter gracilis RM3268 contig00009, whole genome shotgun sequence Length of sequence - 23858 bp Number of predicted genes - 21, with homology - 21 Number of transcription units - 11, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 86 - 145 4.9 1 1 Op 1 . + CDS 289 - 813 580 ## CHAB381_0671 putative integral membrane protein 2 1 Op 2 . + CDS 803 - 1198 344 ## COG0824 Predicted thioesterase - Term 1560 - 1623 6.0 3 2 Op 1 . - CDS 1672 - 2328 409 ## COG1573 Uracil-DNA glycosylase 4 2 Op 2 3/0.000 - CDS 2336 - 3136 262 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 5 2 Op 3 . - CDS 3123 - 4331 1387 ## COG0501 Zn-dependent protease with chaperone function 6 2 Op 4 . - CDS 4337 - 6289 2131 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 6313 - 6372 6.9 + Prom 6263 - 6322 2.2 7 3 Tu 1 . + CDS 6369 - 7481 296 ## PROTEIN SUPPORTED gi|154175142|ref|YP_001407467.1| 30S ribosomal protein S12 - Term 8226 - 8260 -1.0 8 4 Tu 1 . - CDS 8285 - 8668 420 ## gi|257459372|ref|ZP_05624483.1| hypothetical protein CAMGR0001_0687 - Prom 8861 - 8920 2.9 - Term 8813 - 8858 -1.0 9 5 Tu 1 . - CDS 8942 - 9928 1182 ## CCV52592_0887 putative mannonate dehydratase - Prom 9948 - 10007 5.0 + Prom 9994 - 10053 4.8 10 6 Tu 1 . + CDS 10147 - 10587 527 ## gi|257459374|ref|ZP_05624485.1| acetyltransferase, gnat family + Prom 10597 - 10656 3.9 11 7 Op 1 1/0.333 + CDS 10890 - 12212 1587 ## COG0534 Na+-driven multidrug efflux pump 12 7 Op 2 . + CDS 12188 - 13684 1431 ## COG1451 Predicted metal-dependent hydrolase 13 8 Tu 1 . - CDS 13859 - 14299 434 ## gi|257459379|ref|ZP_05624490.1| hypothetical protein CAMGR0001_0695 - Prom 14396 - 14455 4.8 - Term 14468 - 14505 -0.7 14 9 Op 1 . - CDS 14681 - 15253 918 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 15 9 Op 2 . - CDS 15250 - 15774 569 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Prom 15800 - 15859 11.8 + Prom 15810 - 15869 6.8 16 10 Op 1 40/0.000 + CDS 15905 - 16576 1008 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 17 10 Op 2 1/0.333 + CDS 16573 - 17814 1261 ## COG0642 Signal transduction histidine kinase 18 10 Op 3 . + CDS 17811 - 18380 697 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 18504 - 18543 0.1 + Prom 18663 - 18722 4.6 19 11 Op 1 . + CDS 18881 - 20188 1586 ## COG0773 UDP-N-acetylmuramate-alanine ligase 20 11 Op 2 . + CDS 20250 - 21137 827 ## gi|257459389|ref|ZP_05624500.1| conserved hypothetical protein 21 11 Op 3 . + CDS 21127 - 23334 2605 ## COG1193 Mismatch repair ATPase (MutS family) + Term 23407 - 23474 5.1 Predicted protein(s) >gi|257443208|gb|ACYG01000017.1| GENE 1 289 - 813 580 174 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0671 NR:ns ## KEGG: CHAB381_0671 # Name: not_defined # Def: putative integral membrane protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 152 2 150 175 162 61.0 5e-39 MRAIFSIYIFIIAALIGIELSLGALVAPVVFFPQQIIGEGVLSHFQSGKLMSEIFVKYGG ILIAVSIICLVFEMINFNNNKSQSFRLRLSTLMLTLVNIILALLFVLYFTDYVINAQKIG AEATMTPEFAQIHAASEWCMKLIIVFQTVLFFAKILPALAAKKVAPEQSAADAD >gi|257443208|gb|ACYG01000017.1| GENE 2 803 - 1198 344 131 aa, chain + ## HITS:1 COG:Cj0965c KEGG:ns NR:ns ## COG: Cj0965c COG0824 # Protein_GI_number: 15792294 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Campylobacter jejuni # 1 130 1 123 124 103 41.0 6e-23 MQIKIYYEDTDAQGIVYHANYIKFCERARSEALMQAGVDFARADAHFVVSELCAKFLRPA RLGDTLEISTSLAALKNASALLRQEIYKIKDIKNMDFSELLYAQDVKIAFVKEGRPIKFS AEILEFFKSLR >gi|257443208|gb|ACYG01000017.1| GENE 3 1672 - 2328 409 218 aa, chain - ## HITS:1 COG:Cj0963 KEGG:ns NR:ns ## COG: Cj0963 COG1573 # Protein_GI_number: 15792292 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Campylobacter jejuni # 6 218 2 202 202 78 29.0 8e-15 MQSSQLRRLLYYKAFGYRYVSAEILSGGARFFKALDALKSATAECNLCELAKTRTSSSEQ NFKNFKTIKNFKTPANVKLMIVALAPSSSEGFGCGLEAEVAAALDQICAPKEIYFSFLIR CAVPQNRRISSEIILKCAPYLTDEIKILKPKIVLCLGELCCKIVLRNGDLAGMDVLHGSV FNEGGISFVPSFDPAFIAQNPSKAELFKEDLQKIKGLL >gi|257443208|gb|ACYG01000017.1| GENE 4 2336 - 3136 262 266 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 61 261 83 289 294 105 37 3e-22 MRIAEALRWGLGQCGSKYVAREILKFCERLSDEQLVLRCSEELAHEAEFRVKIAEFKDGR PLEYITQSCEFMGFKFYVDERVLIPRCETEILVKKTLALAQSLGEPRICEIGTGSGIIAI CLKKLLPSCRIAASDISADALEVARANAASSGADVEFVHCAYADEIAGEFDLIVSNPPYI ANSYTLDARVLQEPKQALFGGERGDEILKRIVLIAARRAKFLACEMGYDQKQSLSAFLRE QGFRAEFYKDLAQFDRGFVARNLNRS >gi|257443208|gb|ACYG01000017.1| GENE 5 3123 - 4331 1387 402 aa, chain - ## HITS:1 COG:Cj0723c KEGG:ns NR:ns ## COG: Cj0723c COG0501 # Protein_GI_number: 15792072 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Campylobacter jejuni # 5 398 3 394 395 314 43.0 2e-85 MVWFLIFLYALYTIYKISLDLLELSFIRAKLKEPAVVLNEDDYRKAGEVGAVNLRFNIFS HCFSFVVVLIWILAGAGALQRAIYDLTGDGIFAQSCFVTAFLIIGGAISLPLEIYKTFVK DRRLGFSTITPAVFVKDALKSLALTLIFGFAVASALVFCVNSLGAHWWVWGFLLSFGIVL LINLIYPTVIAPLFNKMQPLEQGELKERIEELLRRCGFKSSGVFTIDASKRDKRLNAYFG GFGATKKVVLFDTLIEKLSEDEILAVLGHELGHFKHGDILKGLALSFVLLGATFAVFGNL PAGVFGALGLNADGGATLVFMILFAPILHAFFEPVISKLSRMHEFSADRHGASMQDKKSM IGALKKLGSENKAFPIAHKIYAAVYHSHPSLYERIRELDEDR >gi|257443208|gb|ACYG01000017.1| GENE 6 4337 - 6289 2131 650 aa, chain - ## HITS:1 COG:Cj0888c KEGG:ns NR:ns ## COG: Cj0888c COG0488 # Protein_GI_number: 15792218 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Campylobacter jejuni # 1 649 1 643 643 726 59.0 0 MALIELIDVTKKFGSHVVLDGVNFALDANERVAVIGKNGGGKSTLMKIIAGLCETDEGRV ITQNGLNIQMLAQTPKFDENLSVKDALRRELAEIYAALSEYDAISSEIAAQPENKELLAR QDELIKFIEAKDGWQIDNKIEQVLQNFGLKIYENRSVCTLSGGEIRRVALGALVLKKPDV LLLDEPTNHLDVYMVKFLEDMLLSSKQTIVFISHDRYFIDRLATRSIEIEEGKISNFDGG YENYLRRKQEMLASLEKSHETLLKQLRAEEEWLHRGVKARLKRNEGRKARIMQMRQDAKK NPGAIRRVRLELERASRSFNGTGGDNRKKMLFECTNIGKILNGKVLFKGFSARVLQGERI GIVGVNGAGKSTLLKILLGRSKIDAGEIKRGEIRIGYFDQTRSGITDDKSIIEIFCPNGG DHISVRGSYMHVYGYLKNFLFPKEFLDKPVGVLSGGEKNRLALAKLFTEQYDCLILDEPT NDLDIATINILEDYLLSFEGAVIIVSHDRYFIDKITNKLWVFEKNGTIDQIQMPYSQYLE FEDEMAEIDQIEADAGASASADEGGRENKKEKTSTAKLSYKQNKILEEYPAKIEAIEARI KELNHALSTPEIYQKLGMQGLFEELEEKRGTLNSMENEYYEVLSLAESLK >gi|257443208|gb|ACYG01000017.1| GENE 7 6369 - 7481 296 370 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175142|ref|YP_001407467.1| 30S ribosomal protein S12 [Campylobacter curvus 525.92] # 152 368 22 229 231 118 34 3e-26 MQSLEFNGLRIEIFAPHAPSFASATRAQPLKSTPDILLDASASAQFVSSELLPSHTSARD DPPAVSFGLSAQATSPEPPASAVPNTPLVTPIAPASPSSLAAPKAQAIQSAASSVLDIRP EFTATTDSISSASSMLNTVFATSARAAVPAPPSAEEATSVPIIYLHVLDFGATGTGEIYE FVSRQSDVDFVLTAVYLNEAQWGDKLSPWAAKSPFKGVCDFAGGGAEHLEKFTDELIPRI ERQVFGAGKPAWRACAGYSLAGLFSAYAAFASDKFQKIACVSASFWFSGFDAFVAAHSPQ RGLAHVYASLGEAEMNRKNPRGALCGETALNFIAKCRGAGAKAEFEQNPGGHMQDEIARI SKAILSLVNS >gi|257443208|gb|ACYG01000017.1| GENE 8 8285 - 8668 420 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459372|ref|ZP_05624483.1| ## NR: gi|257459372|ref|ZP_05624483.1| hypothetical protein CAMGR0001_0687 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0687 [Campylobacter gracilis RM3268] # 1 127 81 207 207 241 100.0 1e-62 MRAVNKNKNQSASFYSIDEKTNERAVLKIIGLDFGTFNELKAKAKSANAVGVSIWEGEGK TAIYYKDGFVSEFYEIFGDPADEAVKKDYEIGCDDRFAVDGVVMARDGGATTGFICVDRY GYGIKRK >gi|257443208|gb|ACYG01000017.1| GENE 9 8942 - 9928 1182 328 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0887 NR:ns ## KEGG: CCV52592_0887 # Name: not_defined # Def: putative mannonate dehydratase # Organism: C.curvus # Pathway: not_defined # 1 325 1 325 327 437 61.0 1e-121 MQTLDFHVHLLSKEVRFDRPYDRLALRLFGRRFGIDVSRAIKEPYEAYVDALLGGLRASK YVKKAVLFGVDAKFSDAGELIHRDKTVCADNDSVFEIYQKNPDLIVPFFSINPKRADALD EIDRCFELGFKGAKFLQNYWDLDTRLPRYVPYFEKLAKLGLPLVIHVGNESSVPSTRRCE ALEMIYAPLELGVTTVCAHMAINYEYSHIFRALSRRPRNFGHDYFALLALLRTHKNLYAD VSALMTPVRAKALPHLASQTDVHSRLLYASDFPVPYSAIYNTYDLRLSQRIALHKEPNPF DRNARGLLAYFGEQSDLWSNYKKILPFA >gi|257443208|gb|ACYG01000017.1| GENE 10 10147 - 10587 527 146 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459374|ref|ZP_05624485.1| ## NR: gi|257459374|ref|ZP_05624485.1| acetyltransferase, gnat family [Campylobacter gracilis RM3268] acetyltransferase, gnat family [Campylobacter gracilis RM3268] # 1 146 1 146 146 303 100.0 2e-81 MEFEILENSADFKPSDLNEIMVSIGWDTEQNAASVPPHETYRVWRTYDYVAIAKTQGKTV GVLEAFCDRDNFATSYLYCVIVHKDYQRRGIGTALVNAFNKRFAHTTTFVVTPLHKAEGA GEFLQKCGFKDASEHFTVHMRKRNSI >gi|257443208|gb|ACYG01000017.1| GENE 11 10890 - 12212 1587 440 aa, chain + ## HITS:1 COG:Cj0619 KEGG:ns NR:ns ## COG: Cj0619 COG0534 # Protein_GI_number: 15791979 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Campylobacter jejuni # 2 440 4 438 438 373 50.0 1e-103 MKEISLLRLSLAIYIDMFLRLVTTFINTYMISRVDVSLVGALGAGNEIFLLFITVFGFLA VGCSVLVAQALGAKNKVLAMRAIHTSIAFNALVGLCSGVFVFSCAPFLLHALQVPAELLS ESTIYLKVISIVFAIDAVAIVLSAIVRVYGYANFIIAVSVVMNLVTLAGNYVVLFRPFGL PYYGLEGIGVSTIAGRMIGVFLFFLIITKVLKIKFYLTMFLKIKLATLRKILSVGLPSAG ENMLWIVQYLVAFAFVASMGEASLTVQTIYFQISSFIFFGGSAISMANEVIVGRLVGAAK PQEAYRHTFTALRFGLGATALFVAIVFLAREQIMELLSLSEAHKQVMRPLFYLTLGLEFG RTLNIVFVNALRASGDARFPFAMGVIFMWGVSIPVGWLLGIHLGYGILGVWIGFFCDEWL RGSANTARWISKKWQSKKLV >gi|257443208|gb|ACYG01000017.1| GENE 12 12188 - 13684 1431 498 aa, chain + ## HITS:1 COG:Cj0620 KEGG:ns NR:ns ## COG: Cj0620 COG1451 # Protein_GI_number: 15791980 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 379 494 96 211 215 108 39.0 3e-23 MAEQKVSLNLLGLPISLRFKRMKYARIRISKDCEISVSVPRSYTAAQAKDFILKHESWIR QTLERLRSKLLASDQVRILGKIYKLKFSREVGLGTNCGANESLGDSGVRDCVDDGASSGA GGVNSAHLQSGAGISGSGVNGGDMRGSANNGTGGMNDGAGGGAGSEISKFHSGGRISQSD TASEDFKFNLPGDAAQGLAQQSKMRQSGGFIDTAAQNGAADADLEFNLAREDASLESSEN LKFNPNALGARGQNLNRGGAQNLAGDGFFKSSRIQTEALEQNGDGPVDTAAQNVFEQSRN EILKFHLGGRVPQSNDASKFNSTSSGEILKFKPIAGEGISKSASENAPQNVAQSAQAAER DEPDFTIKNFIRSSKFKDKIFMSRDVILCESEGEFAAFKKAFALEIYLRYIAKLSPQIGR KIARVRVRKMQTRWGSCNHAKGYLNFSLSLIERDPRFVEYVVLHELAHLIHANHGADFYA LIAQIMPDFRARIKLGKG >gi|257443208|gb|ACYG01000017.1| GENE 13 13859 - 14299 434 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459379|ref|ZP_05624490.1| ## NR: gi|257459379|ref|ZP_05624490.1| hypothetical protein CAMGR0001_0695 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0695 [Campylobacter gracilis RM3268] # 1 146 82 227 227 294 100.0 2e-78 MDRKNGPANFRSADDEMFAFLSSLGDRWQVSEGGVKFIEENFAFVGSKPVLRNLKDYATA DCLSFADARSFIDANPAVKARILGGEICYLGDSLTSAEVKFAPEYFYDFLKFIMEQIPEH HYFFSSTARWLLLVAMEKYVEFVALD >gi|257443208|gb|ACYG01000017.1| GENE 14 14681 - 15253 918 190 aa, chain - ## HITS:1 COG:Cj1260c KEGG:ns NR:ns ## COG: Cj1260c COG0484 # Protein_GI_number: 15792584 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Campylobacter jejuni # 1 190 180 372 373 164 47.0 6e-41 MSFIQSCSECGGTGEIVKDRCKDCGGKGFTEEDVSLKFDIPAGIDDGQRVRLSGKGNVSK TGEIGDLYVIVRVKEDSHFLRDGDDLYIEVPVFFTQAILGESIEVPTPRGKAELKLKVGT KDKQRFTIYGEGVPNIRTKKNGDLIVQVNVQTPKKLNEKQEALLRELQENFGSKGGDDEG ILDKIKNFFK >gi|257443208|gb|ACYG01000017.1| GENE 15 15250 - 15774 569 174 aa, chain - ## HITS:1 COG:HP1332 KEGG:ns NR:ns ## COG: HP1332 COG0484 # Protein_GI_number: 15645945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Helicobacter pylori 26695 # 1 154 1 154 369 143 53.0 2e-34 MEEDYYEILGVARDADAETIKKAFRKLALQFHPDRNQGDKESEEKFKKINEAYQILSDDQ KRRMYDRYGKEGISGAYGGAGGGGFDFGSIFGDFFEQAFGGGGRSTRPSDPYGIDTELAV TLEFKEALEGVHKEIKYKIKKPCSTCDATGSKAKKDIPAPLAAARGASRSDAAI >gi|257443208|gb|ACYG01000017.1| GENE 16 15905 - 16576 1008 223 aa, chain + ## HITS:1 COG:Cj1261 KEGG:ns NR:ns ## COG: Cj1261 COG0745 # Protein_GI_number: 15792585 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 1 223 1 223 223 333 74.0 2e-91 MINVLMIEDDSEFAQLLTEYLAKFNIQVTNFEDPYLGISAGIKNYDLLILDLTLPGMDGL EVCKEIREKYDIPIIISSARSDVSDRVVGLQIGADDYLPKPYDPKEMHARIMSLIRRYKK ASEKEETATDSVFRIDDKRHEIYFGEESLVLTPAEYEILEYLIKQHSFSVSREQLVYHCK SLKDKDSKSLDVIIGRLRTKIGDSSKAPKHIFSVRGIGYKLIG >gi|257443208|gb|ACYG01000017.1| GENE 17 16573 - 17814 1261 413 aa, chain + ## HITS:1 COG:Cj1262 KEGG:ns NR:ns ## COG: Cj1262 COG0642 # Protein_GI_number: 15792586 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 3 410 5 409 411 306 40.0 4e-83 MKHSLITKISVFFVIAIILVCVLFITFARMQMNRALGSMQANQINAVNNLLELYKRNAPP SDIERYFSSYGLELVKDKNIIQNIITSGKIFFVQDTSIGEFSSVEYNNSLFLNIKNNSFV VVFESLGTKNLNDPLWVGFLLTMAVLISLYLSIVRSFTPLKKLSKNIKKFAQGNLDVNLA ATHSEDEIGQVAQEFNNAIAKIQELIRSRQLFLRTIMHELKTPIGKGRLITEMLDDETQK ERLVNVFERLEILINEFAKIEQLLSKSYSLNYQDYHFSLILEQVKDMSMLDNWDELISSD IKCDAVINVDFGLFALAIKNLIDNALKYSSDKKVRIICDENKVSVANRGAALAKSFEHYK QAFIRNKDEKATGMGLGLYIIDKICELHKFRFEYNYSDGTHYFSIVFSPKGAI >gi|257443208|gb|ACYG01000017.1| GENE 18 17811 - 18380 697 189 aa, chain + ## HITS:1 COG:Cj1263 KEGG:ns NR:ns ## COG: Cj1263 COG0353 # Protein_GI_number: 15792587 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Campylobacter jejuni # 1 189 2 190 190 202 50.0 4e-52 MSGTDRFEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRIC GAVCEGEICEYCADDERESDKICIVENPKDIFILESNKIYNGRYFVLDAADEDKIAALRE MVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVSLDNVDMLSLI KAINGRTDI >gi|257443208|gb|ACYG01000017.1| GENE 19 18881 - 20188 1586 435 aa, chain + ## HITS:1 COG:Cj1054c KEGG:ns NR:ns ## COG: Cj1054c COG0773 # Protein_GI_number: 15792381 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Campylobacter jejuni # 1 432 2 428 432 477 60.0 1e-134 MKKVHFIGIGGIGISALARFLHEKNFIISGSDIKESETTYKLRADGMEIITPHDASAIKD QEIVIYSAAIKEDNVELQAARKKGIVCLSRKEALPFVLKDKRVFAVAGAHGKSTTSAITS ALINGSVIIGAISKQFGSNMKYENSENIIFEADESDSSFLNSNPYVAVVTNAEPEHMDHY DNDLDKFHAAYRGFLERAKIRVINAEDEFLSSIKLGCIKLFPSRDITDLKVLLRDHQPFM SFNLKELGRFEVYGLGRHIAIDASLAILAAACETGLEQIRKNLLNYKGIKKRFDILCATP NFVLIDDYGHHPTEIRATLQSAREYASLLGLSKITAIFQPHRFSRLKANLNAFKECFAGV EELVVLPVYAAGEPSNGIDLKEEFKGLGALFTERVFRNGEKIEFSDIFGVRHIINDGLVI GFGAGDITYQLRGEF >gi|257443208|gb|ACYG01000017.1| GENE 20 20250 - 21137 827 295 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459389|ref|ZP_05624500.1| ## NR: gi|257459389|ref|ZP_05624500.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 295 1 295 295 417 100.0 1e-115 MRFLVFIFAFLFIAAIFFVRDEILSKRAKIIATALIVLLCAGAYLYESVSEHSAKLEEEM VFKFNAGARLRCGGAINFASEARGSANSSPETRDADAKNLGAQAGEANLNAQDKVTSTAQ SSTAQTNEQASAAQINGAASGGQNSAQSPTLQNSAEPGQNFKSQNSTKNLDVASQNSTQQ NDTQNLAPQNSASQGGMRSSISQNSAQRDDTQISDPQGSAQNFNAAEKNSMQGSTAQNSK ATQNFAADKEQGSAQIVTRESFTYSFSLGAFIAKKSAGAEFRGKTYKIKECVYDQ >gi|257443208|gb|ACYG01000017.1| GENE 21 21127 - 23334 2605 735 aa, chain + ## HITS:1 COG:Cj1052c KEGG:ns NR:ns ## COG: Cj1052c COG1193 # Protein_GI_number: 15792379 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Campylobacter jejuni # 4 735 7 736 736 781 56.0 0 MISDELFTRLDLSEYLAKFKSFLAREKPLFLSGDSKLNFEKISELTKFDLAQCESVANLD DALMRISKHGVLHISEIYEFSKIVRYFLYLKKQPFEGKLAAWLAKIEIPQPIAQLKDYFD DQGGFCDAIDERFGALNEAFKIKRDEIEQTLKRLIYSKALSPYLADTQIHYISDTEALLV RGGFNHVLKGSVVARSSGGYFYVLPDAIAALKSAQSAILDKKEQIVFEHCKQISAVFNKN LAFLKFINAAFDQIDALIARAAMARASDYEFILPEPSRDIVLDSFAHPALKNPKRVSVEF SGKILLITGVNAGGKSMLLKSILSAALLAKYLLPMPIRASGSRIGTFKEFELIMEDPQNS KNDISTFAGRMVAFSKLFGRKEILIGVDEIELGTDFEEAASLYGAMIEQLISGDVKMIIT THHKRLAMLLAKDPRVELLAALYDEKNSAPKYEFLKGTIGKSYAFETALRYGIAQNLIAA ARKNYGENKENLNEAISKAINLELELKQKLAQTQQKEEKLDALSEALKDQRERAQSELKA ELSRLQNEYYRAISEAKRSVSLSDVREKQRAINRANELARAVQQPELSTPEPQSFKAGDR VKYGKIKGEILSLSKTQALMLSDGIRLRVPLGELKRSGAAPAPAKNISIKVQKPTSASLV LDLHGLRAEEAISRLDKFISQSLVMGFDEIIVKHGIGTGKLAFAVKEFLKSHPSVKGFRD GTPAEGGFGSKVVSL Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:57:27 2011 Seq name: gi|257443206|gb|ACYG01000018.1| Campylobacter gracilis RM3268 contig00051, whole genome shotgun sequence Length of sequence - 1028 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1013 723 ## CCC13826_1952 hypothetical protein Predicted protein(s) >gi|257443206|gb|ACYG01000018.1| GENE 1 2 - 1013 723 337 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1952 NR:ns ## KEGG: CCC13826_1952 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 2 198 27 220 651 146 44.0 2e-33 MLIKTGDFSFNENVAEYANAYELSKAYGKDLSSVLMDEKVGIGTKEQVIKSLVDAYAKAN GLNLEGIKVKLISDANAKGKNDEPFKGNFDSLSKTITLNLANTSDIKTFAQTLGHELSHA IDYKKGRFAPGDKAMNKYADIKGDHFADYLERGLDITGSKINLGDKLPSYDKYNKINQAL LEHNLKNFNSTDKRWSDNADLNLFNFGLHLDAPRYMSALSLSVILRDEEIYRVYGHGDSQ GFIHDEREAYHSGIKLAPEDLVKLIQRDPEYRKTKIIDLRACYSGFKSYSGEAYAQRVAD LTGKPTIGYTDEYMYRLFEGIPNQDLGSVMVPFIPKK Prediction of potential genes in microbial genomes Time: Wed Jun 29 06:58:53 2011 Seq name: gi|257442819|gb|ACYG01000019.1| Campylobacter gracilis RM3268 contig00010, whole genome shotgun sequence Length of sequence - 295550 bp Number of predicted genes - 253, with homology - 249 Number of transcription units - 137, operones - 56 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 4287 4949 ## gi|257459395|ref|ZP_05624504.1| hypothetical protein CAMGR0001_0708 - Prom 4322 - 4381 2.4 2 1 Op 2 . - CDS 4502 - 5965 1268 ## gi|257459396|ref|ZP_05624505.1| outer membrane autotransporter barrel domain protein - Prom 5993 - 6052 11.6 - Term 6616 - 6665 8.2 3 2 Tu 1 . - CDS 6848 - 8269 1692 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 8408 - 8467 7.6 + Prom 8354 - 8413 7.2 4 3 Op 1 3/0.091 + CDS 8438 - 9352 1011 ## COG2214 DnaJ-class molecular chaperone 5 3 Op 2 1/0.318 + CDS 9365 - 9676 505 ## COG0789 Predicted transcriptional regulators + Term 9908 - 9955 -1.0 + Prom 9869 - 9928 9.1 6 4 Tu 1 . + CDS 10150 - 11799 570 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 11806 - 11841 2.0 7 5 Op 1 . - CDS 12091 - 12891 235 ## gi|257459403|ref|ZP_05624512.1| hypothetical protein CAMGR0001_0716 8 5 Op 2 . - CDS 12758 - 13153 315 ## gi|257459404|ref|ZP_05624513.1| hypothetical protein CAMGR0001_0717 - Prom 13311 - 13370 6.2 9 6 Tu 1 . - CDS 13421 - 14230 1113 ## COG0500 SAM-dependent methyltransferases - Prom 14415 - 14474 5.5 10 7 Tu 1 . - CDS 14504 - 14965 462 ## LA_0562 hypothetical protein 11 8 Op 1 . - CDS 15098 - 15631 437 ## gi|257459409|ref|ZP_05624518.1| hypothetical protein CAMGR0001_0722 12 8 Op 2 . - CDS 15624 - 16307 837 ## Vpar_0717 hypothetical protein - Prom 16327 - 16386 3.3 13 9 Op 1 35/0.000 - CDS 16503 - 17249 201 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 14 9 Op 2 33/0.000 - CDS 17249 - 18250 1244 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 15 9 Op 3 4/0.045 - CDS 18261 - 19307 1366 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 19328 - 19387 5.8 - Term 19593 - 19641 11.0 16 10 Tu 1 . - CDS 19693 - 21690 1808 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 21824 - 21883 7.5 17 11 Tu 1 . + CDS 22065 - 22301 66 ## + Term 22383 - 22425 3.1 18 12 Op 1 . - CDS 23746 - 24384 862 ## COG0325 Predicted enzyme with a TIM-barrel fold 19 12 Op 2 1/0.318 - CDS 24381 - 25430 1335 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 - Prom 25538 - 25597 4.0 - Term 26040 - 26089 0.4 20 13 Op 1 1/0.318 - CDS 26282 - 26836 653 ## COG0558 Phosphatidylglycerophosphate synthase 21 13 Op 2 3/0.091 - CDS 26836 - 27615 213 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 22 13 Op 3 3/0.091 - CDS 27616 - 28512 1406 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 23 13 Op 4 3/0.091 - CDS 28505 - 29758 1576 ## COG0612 Predicted Zn-dependent peptidases 24 13 Op 5 . - CDS 29758 - 31404 1643 ## COG0167 Dihydroorotate dehydrogenase - Prom 31442 - 31501 7.5 - Term 31594 - 31635 0.6 25 14 Op 1 . - CDS 31757 - 32986 1077 ## gi|257459436|ref|ZP_05624545.1| hypothetical protein CAMGR0001_0749 26 14 Op 2 . - CDS 32998 - 33297 499 ## CHAB381_1033 hypothetical protein 27 14 Op 3 . - CDS 33329 - 34600 1468 ## COG0001 Glutamate-1-semialdehyde aminotransferase 28 14 Op 4 . - CDS 34597 - 34989 525 ## CHAB381_1035 hypothetical protein 29 14 Op 5 40/0.000 - CDS 35040 - 36281 1296 ## COG0642 Signal transduction histidine kinase - Term 36717 - 36749 2.1 30 14 Op 6 . - CDS 36783 - 37460 828 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 37504 - 37563 9.5 + Prom 37701 - 37760 6.4 31 15 Tu 1 . + CDS 37787 - 38083 408 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 38098 - 38126 1.3 + TRNA 38156 - 38242 74.8 # Leu CAA 0 0 + Prom 38167 - 38226 80.4 32 16 Op 1 . + CDS 38358 - 39791 1533 ## COG0439 Biotin carboxylase 33 16 Op 2 . + CDS 39800 - 40084 397 ## gi|257459446|ref|ZP_05624555.1| conserved hypothetical protein 34 16 Op 3 . + CDS 40077 - 40811 836 ## COG2935 Putative arginyl-tRNA:protein arginylyltransferase 35 17 Tu 1 . - CDS 41238 - 42056 899 ## Cla_0124 ATP/GTP-binding protein - Prom 42082 - 42141 7.5 - Term 42684 - 42743 13.1 36 18 Op 1 3/0.091 - CDS 42821 - 43543 300 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 37 18 Op 2 1/0.318 - CDS 43536 - 43943 392 ## COG0802 Predicted ATPase or kinase 38 18 Op 3 . - CDS 43927 - 44172 258 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 44233 - 44292 5.4 + Prom 44179 - 44238 4.5 39 19 Tu 1 . + CDS 44261 - 45484 1585 ## COG0137 Argininosuccinate synthase + Prom 45577 - 45636 7.5 40 20 Op 1 3/0.091 + CDS 45666 - 46109 517 ## PROTEIN SUPPORTED gi|154147953|ref|YP_001406621.1| ribosomal protein L9 41 20 Op 2 24/0.000 + CDS 46102 - 46650 543 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 42 20 Op 3 3/0.091 + CDS 46632 - 47966 1109 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 48003 - 48047 -0.7 43 21 Op 1 . + CDS 48480 - 49349 953 ## COG1159 GTPase 44 21 Op 2 . + CDS 49412 - 50932 1853 ## CHAB381_1059 hypothetical protein 45 21 Op 3 . + CDS 50932 - 51585 573 ## CHAB381_1058 hypothetical protein 46 21 Op 4 . + CDS 51585 - 52013 367 ## CHAB381_1057 transformation system protein 47 21 Op 5 . + CDS 51991 - 53499 1261 ## COG1450 Type II secretory pathway, component PulD 48 21 Op 6 . + CDS 53492 - 54322 715 ## CHAB381_1055 hypothetical protein 49 21 Op 7 . + CDS 54315 - 55322 804 ## CHAB381_1054 hypothetical protein 50 21 Op 8 . + CDS 55319 - 55858 535 ## CHAB381_1053 hypothetical protein 51 21 Op 9 24/0.000 + CDS 55864 - 57612 1634 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 52 21 Op 10 . + CDS 57609 - 58853 1165 ## COG1459 Type II secretory pathway, component PulF + Term 58863 - 58898 6.5 53 22 Tu 1 . + CDS 59237 - 61255 1984 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 61258 - 61310 4.0 54 23 Op 1 31/0.000 + CDS 63156 - 64316 1250 ## COG0772 Bacterial cell division membrane protein + Term 64408 - 64441 2.3 55 23 Op 2 . + CDS 64455 - 65468 1068 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase + Term 65524 - 65574 -0.9 56 24 Tu 1 . - CDS 65701 - 66612 459 ## gi|257459484|ref|ZP_05624593.1| hypothetical protein CAMGR0001_0798 - Prom 66834 - 66893 12.2 + Prom 66864 - 66923 9.6 57 25 Tu 1 . + CDS 66946 - 68787 2519 ## COG0326 Molecular chaperone, HSP90 family + Term 68828 - 68878 9.3 + Prom 69137 - 69196 10.3 58 26 Tu 1 . + CDS 69237 - 70628 1739 ## CCV52592_2207 metalloid reductase RarA + Term 70638 - 70669 2.5 - Term 71166 - 71200 1.1 59 27 Op 1 . - CDS 71250 - 71939 781 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 60 27 Op 2 . - CDS 71918 - 72349 326 ## CCC13826_1830 flavocytochrome c heme subunit - Term 72357 - 72401 1.1 61 27 Op 3 . - CDS 72429 - 73970 1814 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 74013 - 74072 10.0 + Prom 74015 - 74074 6.3 62 28 Tu 1 . + CDS 74111 - 75022 917 ## COG0583 Transcriptional regulator + Term 75237 - 75264 -0.9 - Term 75220 - 75252 2.1 63 29 Tu 1 . - CDS 75260 - 76249 1321 ## COG3258 Cytochrome c - Prom 76279 - 76338 7.1 64 30 Tu 1 . - CDS 76365 - 76844 -125 ## gi|257459497|ref|ZP_05624606.1| hypothetical protein CAMGR0001_0811 - Prom 76983 - 77042 3.8 - Term 77564 - 77598 -0.9 65 31 Op 1 . - CDS 77625 - 78803 1518 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 66 31 Op 2 . - CDS 78800 - 79279 364 ## gi|257459502|ref|ZP_05624611.1| conserved hypothetical protein 67 31 Op 3 1/0.318 - CDS 79290 - 79985 802 ## COG1045 Serine acetyltransferase 68 31 Op 4 1/0.318 - CDS 79982 - 81820 2185 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) 69 31 Op 5 . - CDS 81817 - 83058 1356 ## COG0124 Histidyl-tRNA synthetase - Prom 83112 - 83171 4.9 70 32 Tu 1 . - CDS 83228 - 83710 779 ## Fluta_0862 hypothetical protein - Prom 83780 - 83839 5.8 71 33 Tu 1 . - CDS 83922 - 86882 2746 ## COG1200 RecG-like helicase - Prom 86922 - 86981 1.5 72 34 Tu 1 . - CDS 87527 - 88786 1787 ## COG0612 Predicted Zn-dependent peptidases - Term 89191 - 89225 1.6 73 35 Op 1 . - CDS 89234 - 90283 1122 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 74 35 Op 2 . - CDS 90286 - 90660 396 ## gi|257459513|ref|ZP_05624622.1| conserved hypothetical protein 75 35 Op 3 . - CDS 90653 - 91003 270 ## CHAB381_0146 nucleotidyltransferase family protein 76 35 Op 4 . - CDS 91005 - 91577 720 ## CHAB381_1030 nodulation efficiency protein D (NfeD) 77 35 Op 5 . - CDS 91574 - 92494 1166 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Prom 92514 - 92573 7.2 + Prom 92519 - 92578 8.0 78 36 Tu 1 . + CDS 92613 - 93803 1162 ## COG0477 Permeases of the major facilitator superfamily 79 37 Tu 1 . - CDS 93814 - 94905 918 ## COG0477 Permeases of the major facilitator superfamily - Prom 95020 - 95079 7.0 - Term 95432 - 95469 -0.9 80 38 Tu 1 . - CDS 95557 - 97278 239 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 97400 - 97459 6.0 - Term 98217 - 98266 13.5 81 39 Op 1 3/0.091 - CDS 98269 - 99699 1684 ## COG0215 Cysteinyl-tRNA synthetase 82 39 Op 2 . - CDS 99686 - 101083 506 ## PROTEIN SUPPORTED gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 - Prom 101117 - 101176 3.3 + Prom 101079 - 101138 9.8 83 40 Op 1 23/0.000 + CDS 101338 - 102267 819 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 84 40 Op 2 13/0.000 + CDS 102210 - 103034 220 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Prom 103327 - 103386 5.8 85 40 Op 3 . + CDS 103553 - 104440 1100 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 86 40 Op 4 . + CDS 104443 - 105006 398 ## PROTEIN SUPPORTED gi|154175220|ref|YP_001408231.1| 50S ribosomal protein L5 (BL6) 87 40 Op 5 1/0.318 + CDS 105003 - 105557 556 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 88 40 Op 6 . + CDS 105581 - 106612 1052 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Term 106627 - 106662 3.3 89 41 Op 1 . + CDS 106673 - 106891 354 ## CCV52592_1153 general stress protein 14 (GSP14) (EC:1.6.99.-) 90 41 Op 2 3/0.091 + CDS 106881 - 107612 621 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 108310 - 108369 3.4 91 42 Tu 1 . + CDS 108464 - 110242 1794 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase + Prom 110410 - 110469 3.2 92 43 Op 1 . + CDS 110489 - 111169 692 ## COG4912 Predicted DNA alkylation repair enzyme + Prom 111181 - 111240 1.7 93 43 Op 2 . + CDS 111268 - 111636 490 ## CA_C3526 FMN-binding protein + Term 111650 - 111711 4.3 + Prom 111695 - 111754 6.4 94 44 Tu 1 . + CDS 111912 - 112685 232 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 112686 - 112726 2.0 + Prom 112853 - 112912 4.1 95 45 Tu 1 . + CDS 113061 - 113654 595 ## CCC13826_2199 putative transport-associated + Term 113779 - 113828 -0.1 - Term 113567 - 113607 0.4 96 46 Tu 1 . - CDS 113850 - 114062 62 ## - Prom 114180 - 114239 3.1 + Prom 114039 - 114098 4.6 97 47 Tu 1 . + CDS 114203 - 114871 952 ## COG0035 Uracil phosphoribosyltransferase + Term 115078 - 115122 1.7 - Term 115322 - 115371 0.7 98 48 Tu 1 . - CDS 115564 - 117618 1898 ## COG0210 Superfamily I DNA and RNA helicases - Prom 117800 - 117859 4.5 + Prom 117579 - 117638 7.0 99 49 Op 1 7/0.000 + CDS 117660 - 121217 2864 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC 100 49 Op 2 . + CDS 121265 - 126433 4880 ## COG2373 Large extracellular alpha-helical protein + Term 126451 - 126504 4.0 + Prom 126612 - 126671 6.9 101 50 Tu 1 . + CDS 126703 - 128253 2068 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 128305 - 128369 7.2 + Prom 128604 - 128663 7.1 102 51 Tu 1 . + CDS 128706 - 130250 1661 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 130293 - 130352 6.2 103 52 Tu 1 . + CDS 130404 - 131165 569 ## COG1145 Ferredoxin - Term 131956 - 132000 2.9 104 53 Op 1 40/0.000 - CDS 132035 - 133756 1314 ## COG0642 Signal transduction histidine kinase 105 53 Op 2 . - CDS 133740 - 134402 626 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 134453 - 134512 2.8 106 54 Op 1 . - CDS 134534 - 135172 407 ## gi|257459561|ref|ZP_05624670.1| hypothetical protein CAMGR0001_0875 107 54 Op 2 . - CDS 135186 - 135689 623 ## COG3212 Predicted membrane protein - Prom 135729 - 135788 5.0 + Prom 135739 - 135798 5.3 108 55 Op 1 . + CDS 135896 - 137200 884 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 109 55 Op 2 . + CDS 137230 - 137511 331 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 137592 - 137626 -0.5 110 56 Tu 1 . - CDS 137717 - 138622 816 ## COG0583 Transcriptional regulator - Prom 138651 - 138710 8.2 + Prom 138653 - 138712 8.2 111 57 Op 1 36/0.000 + CDS 138764 - 140644 2051 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 112 57 Op 2 2/0.091 + CDS 140641 - 141615 857 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 113 57 Op 3 . + CDS 141626 - 142483 948 ## COG2048 Heterodisulfide reductase, subunit B + Prom 142729 - 142788 9.6 114 58 Op 1 11/0.000 + CDS 142872 - 144017 1238 ## COG1740 Ni,Fe-hydrogenase I small subunit 115 58 Op 2 8/0.000 + CDS 144020 - 145741 1880 ## COG0374 Ni,Fe-hydrogenase I large subunit 116 58 Op 3 7/0.000 + CDS 145745 - 146419 903 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit 117 58 Op 4 . + CDS 146416 - 147294 744 ## COG0680 Ni,Fe-hydrogenase maturation factor 118 58 Op 5 . + CDS 147278 - 148915 1481 ## CHAB381_0865 hypothetical protein 119 58 Op 6 . + CDS 148927 - 149190 77 ## gi|257459577|ref|ZP_05624686.1| hypothetical protein CAMGR0001_0891 120 58 Op 7 . + CDS 149201 - 153649 3576 ## COG0068 Hydrogenase maturation factor + Prom 154157 - 154216 6.5 121 59 Tu 1 . + CDS 154241 - 154672 537 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain + Term 154740 - 154783 3.6 + Prom 155287 - 155346 8.8 122 60 Op 1 8/0.000 + CDS 155412 - 156239 927 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 123 60 Op 2 13/0.000 + CDS 156239 - 156520 472 ## COG0298 Hydrogenase maturation factor 124 60 Op 3 4/0.045 + CDS 156556 - 157653 1197 ## COG0409 Hydrogenase maturation factor + Prom 157660 - 157719 4.8 125 61 Tu 1 3/0.091 + CDS 157838 - 159025 1215 ## COG0309 Hydrogenase maturation factor + Prom 159028 - 159087 3.2 126 62 Tu 1 . + CDS 159134 - 159691 580 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) + Prom 160239 - 160298 9.9 127 63 Op 1 . + CDS 160383 - 162455 2354 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 128 63 Op 2 . + CDS 162490 - 163236 856 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Prom 163397 - 163456 6.5 129 64 Tu 1 . + CDS 163621 - 164388 391 ## gi|257459592|ref|ZP_05624701.1| putative lipoprotein + Prom 164495 - 164554 7.0 130 65 Op 1 8/0.000 + CDS 164661 - 165695 1482 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Prom 165870 - 165929 6.8 131 65 Op 2 33/0.000 + CDS 165960 - 167006 1035 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 132 65 Op 3 35/0.000 + CDS 167006 - 167986 763 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 133 65 Op 4 . + CDS 167970 - 168734 194 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Prom 169146 - 169205 6.7 134 66 Tu 1 . + CDS 169226 - 169819 505 ## gi|257459601|ref|ZP_05624710.1| putative membrane protein + Prom 169845 - 169904 6.8 135 67 Op 1 . + CDS 169928 - 170626 507 ## gi|257459602|ref|ZP_05624711.1| putative membrane protein + Prom 170644 - 170703 3.8 136 67 Op 2 . + CDS 170725 - 171387 426 ## gi|257459603|ref|ZP_05624712.1| putative membrane protein 137 68 Tu 1 . + CDS 171531 - 172349 798 ## gi|257459605|ref|ZP_05624714.1| putative membrane protein 138 69 Tu 1 . - CDS 172616 - 173707 1242 ## COG0842 ABC-type multidrug transport system, permease component - Prom 173734 - 173793 1.6 + Prom 173513 - 173572 1.9 139 70 Tu 1 . + CDS 173747 - 174142 113 ## - Term 174630 - 174687 1.3 140 71 Op 1 . - CDS 174906 - 176534 1820 ## COG0842 ABC-type multidrug transport system, permease component 141 71 Op 2 . - CDS 176531 - 176752 58 ## gi|257459610|ref|ZP_05624719.1| hypothetical protein CAMGR0001_0924 - Prom 176874 - 176933 3.4 142 72 Tu 1 . - CDS 177336 - 179201 323 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 179364 - 179423 2.5 143 73 Tu 1 . + CDS 179497 - 179958 -249 ## gi|257459615|ref|ZP_05624724.1| hypothetical protein CAMGR0001_0929 + Term 180179 - 180211 0.6 - Term 180352 - 180395 0.8 144 74 Tu 1 . - CDS 180522 - 181487 932 ## COG0845 Membrane-fusion protein - Prom 181705 - 181764 6.1 - Term 182062 - 182113 3.2 145 75 Tu 1 . - CDS 182136 - 182618 739 ## COG0716 Flavodoxins - Prom 182638 - 182697 10.4 + Prom 182608 - 182667 8.6 146 76 Tu 1 . + CDS 182831 - 183328 669 ## Tola_2807 17 kDa surface antigen + Term 183364 - 183409 11.2 + Prom 183476 - 183535 7.4 147 77 Op 1 . + CDS 183558 - 184070 335 ## gi|257459622|ref|ZP_05624731.1| hypothetical protein CAMGR0001_0936 148 77 Op 2 . + CDS 184073 - 184573 331 ## gi|257459623|ref|ZP_05624732.1| hypothetical protein CAMGR0001_0937 149 78 Op 1 22/0.000 - CDS 184790 - 185344 657 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 150 78 Op 2 23/0.000 - CDS 185341 - 186186 924 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 151 78 Op 3 8/0.000 - CDS 186187 - 187308 1135 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 152 78 Op 4 . - CDS 187308 - 187619 506 ## COG1146 Ferredoxin - Prom 187800 - 187859 6.0 - Term 187842 - 187886 5.2 153 79 Tu 1 . - CDS 188019 - 188900 988 ## COG0039 Malate/lactate dehydrogenases - Prom 188942 - 189001 5.8 154 80 Tu 1 . - CDS 189009 - 189959 1073 ## COG1559 Predicted periplasmic solute-binding protein + Prom 189955 - 190014 6.0 155 81 Op 1 . + CDS 190089 - 192677 3082 ## CHAB381_1133 hypothetical protein 156 81 Op 2 12/0.000 + CDS 192674 - 193087 423 ## COG0582 Integrase 157 81 Op 3 . + CDS 193020 - 193736 905 ## COG0582 Integrase + Term 193792 - 193824 -0.6 - Term 194475 - 194515 3.6 158 82 Tu 1 . - CDS 194540 - 195184 808 ## COG1592 Rubrerythrin - Prom 195228 - 195287 5.8 159 83 Op 1 . - CDS 195595 - 196269 272 ## CHAB381_0915 phosphohistidine phosphatase SixA 160 83 Op 2 . - CDS 196314 - 196871 637 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 196891 - 196950 5.0 - Term 197543 - 197581 -0.7 161 84 Tu 1 . - CDS 197629 - 198264 653 ## CHAB381_0918 hypothetical protein - Prom 198363 - 198422 5.7 + Prom 198230 - 198289 11.7 162 85 Op 1 . + CDS 198388 - 199656 1382 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Prom 199664 - 199723 2.6 163 85 Op 2 . + CDS 199893 - 201074 1035 ## COG0303 Molybdopterin biosynthesis enzyme + TRNA 201136 - 201210 83.8 # Gly GCC 0 0 + Prom 201136 - 201195 76.5 164 86 Op 1 3/0.091 + CDS 201287 - 201841 414 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 165 86 Op 2 . + CDS 201841 - 202317 345 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 166 87 Tu 1 . + CDS 202390 - 203472 1086 ## gi|257459647|ref|ZP_05624756.1| hypothetical protein CAMGR0001_0963 + Term 203504 - 203553 -0.8 + Prom 204228 - 204287 2.6 167 88 Tu 1 . + CDS 204315 - 204941 724 ## COG0125 Thymidylate kinase + Term 205039 - 205105 3.2 + Prom 205053 - 205112 6.8 168 89 Tu 1 . + CDS 205258 - 205845 426 ## gi|257459651|ref|ZP_05624760.1| hypothetical protein CAMGR0001_0967 + Term 205858 - 205911 -0.5 169 90 Op 1 . - CDS 206117 - 206560 200 ## gi|257459653|ref|ZP_05624762.1| hypothetical protein CAMGR0001_0969 170 90 Op 2 . - CDS 206656 - 206862 225 ## gi|257459654|ref|ZP_05624763.1| hypothetical protein CAMGR0001_0970 - Prom 206932 - 206991 4.1 - Term 207716 - 207751 -1.0 171 91 Op 1 3/0.091 - CDS 207929 - 209032 1725 ## COG0012 Predicted GTPase, probable translation factor 172 91 Op 2 3/0.091 - CDS 209033 - 210493 1680 ## COG0260 Leucyl aminopeptidase 173 91 Op 3 3/0.091 - CDS 210468 - 210974 529 ## COG0586 Uncharacterized membrane-associated protein - Prom 211023 - 211082 4.3 - Term 210977 - 211020 -0.5 174 92 Op 1 . - CDS 211088 - 211636 598 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 175 92 Op 2 . - CDS 211633 - 211875 242 ## gi|257459663|ref|ZP_05624772.1| hypothetical protein CAMGR0001_0979 176 92 Op 3 . - CDS 211872 - 213245 1088 ## COG0698 Ribose 5-phosphate isomerase RpiB 177 92 Op 4 3/0.091 - CDS 213255 - 214100 721 ## COG0681 Signal peptidase I 178 92 Op 5 . - CDS 214101 - 214958 922 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase - Prom 215039 - 215098 6.6 - Term 215653 - 215685 -1.0 179 93 Tu 1 . - CDS 215735 - 216925 1497 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component - Term 217607 - 217661 10.4 180 94 Tu 1 . - CDS 217686 - 220304 3155 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 220379 - 220438 7.8 + Prom 220339 - 220398 9.8 181 95 Op 1 . + CDS 220425 - 220937 690 ## COG2834 Outer membrane lipoprotein-sorting protein 182 95 Op 2 . + CDS 220989 - 221504 470 ## COG0394 Protein-tyrosine-phosphatase 183 95 Op 3 . + CDS 221570 - 222022 454 ## CCV52592_0766 2-isopropylmalate synthase (EC:2.3.3.13) 184 95 Op 4 . + CDS 222019 - 222948 952 ## COG0181 Porphobilinogen deaminase + Term 222959 - 222997 1.2 + Prom 222950 - 223009 3.1 185 96 Tu 1 . + CDS 223045 - 223809 642 ## CCV52592_0768 hypothetical protein - Term 223803 - 223846 3.8 186 97 Op 1 . - CDS 224074 - 225090 801 ## CCC13826_1826 hypothetical protein 187 97 Op 2 . - CDS 225185 - 226372 1496 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Prom 226392 - 226451 7.8 - Term 226933 - 226983 0.3 188 98 Op 1 2/0.091 - CDS 227075 - 227989 671 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 189 98 Op 2 . - CDS 227999 - 228412 431 ## COG1959 Predicted transcriptional regulator 190 98 Op 3 . - CDS 228412 - 229683 1250 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 229704 - 229763 8.3 + Prom 229799 - 229858 7.9 191 99 Op 1 . + CDS 229878 - 230234 397 ## CHAB381_0892 hypothetical protein 192 99 Op 2 . + CDS 230235 - 231149 801 ## COG0546 Predicted phosphatases + Prom 231998 - 232057 6.3 193 100 Op 1 . + CDS 232082 - 232327 416 ## CHAB381_0894 hypothetical protein 194 100 Op 2 3/0.091 + CDS 232351 - 233319 1032 ## COG0142 Geranylgeranyl pyrophosphate synthase 195 100 Op 3 3/0.091 + CDS 233319 - 234848 1708 ## COG0373 Glutamyl-tRNA reductase 196 100 Op 4 . + CDS 234866 - 236584 1878 ## COG0442 Prolyl-tRNA synthetase + Prom 236942 - 237001 2.8 197 101 Tu 1 . + CDS 237021 - 237695 389 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 237938 - 237976 -0.8 198 102 Op 1 . - CDS 237911 - 238180 187 ## gi|257459699|ref|ZP_05624808.1| hypothetical protein CAMGR0001_1015 199 102 Op 2 . - CDS 238152 - 238292 61 ## gi|257459700|ref|ZP_05624809.1| hypothetical protein CAMGR0001_1016 - Prom 238503 - 238562 3.2 200 103 Tu 1 . - CDS 238568 - 239035 378 ## gi|257459702|ref|ZP_05624811.1| hypothetical protein CAMGR0001_1018 - Prom 239205 - 239264 4.1 - Term 239459 - 239485 -0.6 201 104 Tu 1 . - CDS 239635 - 240213 654 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 240290 - 240349 1.8 - Term 240258 - 240295 0.1 202 105 Tu 1 . - CDS 240351 - 240971 868 ## COG3340 Peptidase E - Prom 241112 - 241171 4.6 - Term 241298 - 241330 -0.9 203 106 Op 1 1/0.318 - CDS 241344 - 242294 1305 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 204 106 Op 2 32/0.000 - CDS 242326 - 242796 709 ## COG0440 Acetolactate synthase, small (regulatory) subunit 205 106 Op 3 . - CDS 242798 - 244492 2055 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 244862 - 244926 0.1 206 107 Tu 1 . - CDS 244935 - 245672 609 ## CHAB381_1164 hypothetical protein - Prom 245847 - 245906 5.6 + Prom 245704 - 245763 5.0 207 108 Op 1 21/0.000 + CDS 245785 - 247383 1828 ## COG0280 Phosphotransacetylase 208 108 Op 2 . + CDS 247384 - 248616 1410 ## COG0282 Acetate kinase + Term 248714 - 248757 -0.8 209 109 Tu 1 . - CDS 248800 - 249072 141 ## gi|257459713|ref|ZP_05624822.1| hypothetical protein CAMGR0001_1029 - Prom 249315 - 249374 2.9 210 110 Tu 1 . + CDS 249134 - 249328 308 ## gi|257459714|ref|ZP_05624823.1| hypothetical protein CAMGR0001_1030 + Term 249440 - 249482 -1.0 - Term 249336 - 249382 1.0 211 111 Tu 1 . - CDS 249393 - 249908 765 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 250091 - 250150 10.3 - Term 249956 - 250010 6.6 212 112 Tu 1 . - CDS 250154 - 250489 284 ## COG0640 Predicted transcriptional regulators - Prom 250517 - 250576 8.2 + Prom 250457 - 250516 6.9 213 113 Tu 1 . + CDS 250591 - 251550 673 ## COG0701 Predicted permeases + Term 251785 - 251818 -0.1 - Term 251406 - 251439 1.2 214 114 Op 1 40/0.000 - CDS 251555 - 252727 1181 ## COG0642 Signal transduction histidine kinase 215 114 Op 2 . - CDS 252720 - 253382 516 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 216 114 Op 3 . - CDS 253382 - 253615 435 ## gi|257459720|ref|ZP_05624829.1| pyruvate kinase - Prom 253637 - 253696 6.8 - Term 254983 - 255012 -0.7 217 115 Op 1 . - CDS 255054 - 256043 1364 ## COG1135 ABC-type metal ion transport system, ATPase component 218 115 Op 2 . - CDS 256087 - 257073 1099 ## CCC13826_1251 diaminopimelate dehydrogenase (EC:1.4.1.16) - Term 257101 - 257125 -0.3 219 115 Op 3 . - CDS 257134 - 257280 163 ## 220 115 Op 4 . - CDS 257321 - 259936 3037 ## COG0525 Valyl-tRNA synthetase - Prom 260057 - 260116 7.2 + Prom 260087 - 260146 9.6 221 116 Tu 1 . + CDS 260170 - 260946 1000 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 260964 - 260998 5.2 + Prom 260977 - 261036 9.5 222 117 Op 1 . + CDS 261061 - 261885 996 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Prom 262016 - 262075 4.7 223 117 Op 2 . + CDS 262122 - 262721 678 ## PROTEIN SUPPORTED gi|223039927|ref|ZP_03610210.1| ribosomal protein L22 + Prom 262771 - 262830 10.2 224 118 Op 1 . + CDS 263037 - 264443 1598 ## COG1027 Aspartate ammonia-lyase + Term 264456 - 264520 0.3 + Prom 264458 - 264517 6.9 225 118 Op 2 . + CDS 264729 - 266072 1355 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 266092 - 266126 6.0 + Prom 266238 - 266297 6.8 226 119 Tu 1 . + CDS 266356 - 266883 659 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Term 267272 - 267308 1.2 227 120 Tu 1 . - CDS 267479 - 267811 203 ## gi|257459740|ref|ZP_05624849.1| hypothetical protein CAMGR0001_1056 - Term 268278 - 268318 1.5 228 121 Op 1 . - CDS 268480 - 268650 56 ## Coch_0288 hypothetical protein 229 121 Op 2 . - CDS 268562 - 269032 332 ## Coch_0288 hypothetical protein - Prom 269057 - 269116 3.5 230 122 Tu 1 . - CDS 269576 - 270262 625 ## COG2365 Protein tyrosine/serine phosphatase - Prom 270342 - 270401 3.9 - Term 270572 - 270596 -1.0 231 123 Op 1 . - CDS 270655 - 271113 769 ## CCC13826_0326 septicolysin 232 123 Op 2 5/0.045 - CDS 271132 - 271812 1020 ## COG4380 Uncharacterized protein conserved in bacteria 233 123 Op 3 5/0.045 - CDS 271809 - 272303 512 ## COG4259 Uncharacterized protein conserved in bacteria 234 123 Op 4 . - CDS 272313 - 272990 681 ## COG1462 Uncharacterized protein involved in formation of curli polymers - Prom 273033 - 273092 5.4 + Prom 273307 - 273366 2.5 235 124 Tu 1 . + CDS 273440 - 274060 168 ## gi|257459751|ref|ZP_05624860.1| putative membrane protein 236 125 Tu 1 . - CDS 274122 - 274862 966 ## COG0730 Predicted permeases - Prom 274916 - 274975 4.5 237 126 Tu 1 . - CDS 274978 - 275655 839 ## gi|257459754|ref|ZP_05624863.1| hypothetical protein CAMGR0001_1070 - Prom 275881 - 275940 4.4 - Term 276036 - 276075 -0.4 238 127 Tu 1 . - CDS 276324 - 277748 2037 ## COG2268 Uncharacterized protein conserved in bacteria - Prom 277801 - 277860 5.8 + Prom 277785 - 277844 8.1 239 128 Tu 1 . + CDS 277908 - 278927 1197 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Prom 279360 - 279419 2.4 240 129 Tu 1 . + CDS 279509 - 280072 613 ## PG1466 hypothetical protein - Term 280249 - 280296 3.3 241 130 Tu 1 . - CDS 280413 - 281801 1375 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 281824 - 281883 2.8 + Prom 281562 - 281621 4.1 242 131 Tu 1 . + CDS 281858 - 283198 1337 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 283302 - 283360 -0.9 243 132 Op 1 . - CDS 284072 - 284746 580 ## COG4185 Uncharacterized protein conserved in bacteria 244 132 Op 2 . - CDS 284743 - 285444 724 ## DEFDS_2016 hypothetical protein 245 132 Op 3 . - CDS 285435 - 285767 368 ## JJD26997_0948 hypothetical protein 246 132 Op 4 . - CDS 285804 - 286079 325 ## gi|257459770|ref|ZP_05624879.1| hypothetical protein CAMGR0001_1086 - Prom 286242 - 286301 2.6 247 133 Tu 1 . - CDS 286502 - 286819 337 ## CJJ81176_pTet0026 cpp29 - Prom 286853 - 286912 4.7 248 134 Tu 1 . - CDS 286937 - 287815 992 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 287853 - 287912 6.7 + Prom 287798 - 287857 8.1 249 135 Tu 1 . + CDS 287899 - 288402 555 ## CHAB381_1084 hypothetical protein + Prom 288568 - 288627 7.4 250 136 Op 1 9/0.000 + CDS 288816 - 289625 634 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Prom 289641 - 289700 4.0 251 136 Op 2 9/0.000 + CDS 289720 - 290526 907 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Prom 290530 - 290589 4.0 252 136 Op 3 . + CDS 290628 - 291431 847 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Prom 291842 - 291901 8.2 253 137 Tu 1 . + CDS 291927 - 295548 4241 ## gi|257459780|ref|ZP_05624889.1| outer membrane autotransporter barrel domain protein Predicted protein(s) >gi|257442819|gb|ACYG01000019.1| GENE 1 3 - 4287 4949 1428 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459395|ref|ZP_05624504.1| ## NR: gi|257459395|ref|ZP_05624504.1| hypothetical protein CAMGR0001_0708 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0708 [Campylobacter gracilis RM3268] # 1 1428 1 1428 1429 2102 100.0 0 MAGSASNNSVILQGSTINGVVYGAQATTAGSNDNTVNLTNSTVTGTIYGLFGSGSGSGNT LINASDAIAPNKAGNIARFDVLNFLHISNANSDANKAALQITGGAQTDINNAKFQLDGTD YNVDTYAIGDGEKRYLIHNEKGFTGFDETQTTKRTDNVFTIKNATTYSMNLKGLMKDDDG KSIVIQGKKKTDRTIDGAFDNGEVGKYTGPAGDPVIDVGEDPNAPQNFGGLDIDMTGTNN AKINLVSGNNIGTIKADGNDEINVGKDGANPLVPGNITAKNIEKSGPGKLKINFNLPNNY NGGNPAIKLTDNGLTDLTGTDVNVNNAKDGTTYTLVKKTNGGTINFNDRDVQKNQTYTIT DKDHYQYDGETFRRENGNQELVYKKGTITNAWGDTDFDSSELTKNQASNAAQADAHKLFG NKGNTVIVKEGAGNLGSKNISSGRADVKDTDTPNTIHNNYTTIKGGTEFGDVYAGYGDSG TQDVYNNHLSFEETSKGAVVNRNIGAGYNVNGNVHDNTVTTDDTTINGNVYGAQTANGNA VKNIVNLQGGSVGGDVYGSKASSSATNSTVNLSGTQVTGNVYAADAASGSGNTVNFYGGK VGKTIYGLSSAGGTNNTLNVYNASTQKTAGDIKNFNNLNFDGVTAATNGSAATAALNLTT TNDTNIINDAKFKLNGEEYDVNKDTYHSLNIEEGKEYYLIHNAGNTFTGFKEKAKQTDNE FTITGKSSYEINLKGLIQSADNQSILVQGKKLTGRNISSDGKFDNEEISKYTPDLSNGAN INVGKTPGANKDFEGLDIDTSNTPGVKSKVTLVDGKNIGTIKGDADDTVNVGKEDGSLVP GTIEAKNIVGVGKLNFNMPNSYNGDPALKLTGSNLTDLSNTDVKINNAQKDKDYTLIKGN AAINFQDKTTQKEQVYNIIDNAHYQYDGETFRKQNNNKELIYREGTITDAWNDNDFDSNE LTKNKADNAHQGGTPLFDNKGNTVNIVSTAGDLSTKSVYGGATLSGSTDDVFNNTVNING ADTKEIFAGASKGSGRVYDNVVNFNAGSVVNAISGSDDASNARGNNSGNTLNVNNASTQK TAGDIKNFNALNFDGVTAATNGSAATAALNLTTNADTDINDAKFKLGSEEYNVDKDTYGS LNIEEGKEYHLIHNTGNTFTNFTEKAKQTTQEFTLKNSTTYDIMLKGLIKSSDDQSILIQ GSKLTSRNITGGEFGNDEINRYNPIPNPVINVVNENPNSPTNFNGLNINGGNGSTVNLTG GNNIGDITGGAGSTLNVGKNTANPAAPNSITAKNIGGFDDINIFMPPTIKDGDSMIKLTD PTANTDLSNMRGKITAYISGNTDVGDTSTIHLIDKQGSGRLLLPDPSHLQTRVQQGATIE YETYGMVDANGRALDLRFSGKRRVKDDTKSFAETRAASLASLKSGSEL >gi|257442819|gb|ACYG01000019.1| GENE 2 4502 - 5965 1268 487 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459396|ref|ZP_05624505.1| ## NR: gi|257459396|ref|ZP_05624505.1| outer membrane autotransporter barrel domain protein [Campylobacter gracilis RM3268] outer membrane autotransporter barrel domain protein [Campylobacter gracilis RM3268] # 1 487 1 487 487 644 100.0 0 MKDIKIPIISGLSIAATLALMPMQALADNAKATVTGGGSDGVLHTPGGGYYSGGYEGAGN GGGSKNHIVTITGSASGTDMSGYSIYGGGMGHPSITPTTSADRNQITVQNRATVTTVIGG EGKGATGNTVNIINATVNRVVLGGNGTWAGKPGYSGNAVGNTVNIEGNSHIIGDNNTVGS FEAIVSGGRARYGRSAENNTVNIKGAAQIDKYRIEGATIHQGGSAKGNGVNITGAIVLSN GQEIDGAVSVSPNFASTLEKNYVVINSAGAKLQNITGANATREGITTGSNATASKNYVKL QNGEVRSTTGSYMAAVSNDNYSEISGGKVIGDVHGGFGGGSGTNHVATSTNDYVKISGGE IGGSAYGFRNVNGEIKSSYVEMSGGKVAQDAIGGNSLNGKISNTKVILNGGEVGRDVIGG NSVKGDVTGARVDIKSGVTVGHDIIGGRSEEGKVEGSWVVADLTNKTVNQVIGGTNKILH RQRNGKQ >gi|257442819|gb|ACYG01000019.1| GENE 3 6848 - 8269 1692 473 aa, chain - ## HITS:1 COG:Cj1228c KEGG:ns NR:ns ## COG: Cj1228c COG0265 # Protein_GI_number: 15792552 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Campylobacter jejuni # 3 473 2 472 472 456 55.0 1e-128 MKKSIIISIALAGTLFGASIDIKEAPSNYERVNPGFNQDVVLSYHSSLADVKKSVVNIAT KTKIKAGNSPMSQMFDDPFFKQFFDFDIPQQQEREGSSLGSGVIISEDGYIVTNNHVIEN ADEIVVTLLEGDKEYKAKVIGTDPKTDLAIIKIDEKNLSAVKFADSSKAMEGDIVFAIGN PFGVGGTITQGIISALNKNNIGLNQYENFIQTDASINPGNSGGALVDSRGALLGINSAIL SRGGGNNGVGFAIPSNMVKEIAEKLITNGKIERGFIGVTISDMSKDQKELYESKEGALIS SVEKDMPADKAGIKRGDLITKINGKSIKNANELKNLIGSMAPGSSVDVEFERDGKSKSTT IKLDAMKSDSTTLGSAGENSKSAIEGLKLRTLNDSLRRKYNLDDDVSGALVLSVKDGSKA DDYGFEVGDVIIQVGQNDVKSSDDFDRYIKDYKGKKTLVWVIRRGIPQGLVIR >gi|257442819|gb|ACYG01000019.1| GENE 4 8438 - 9352 1011 304 aa, chain + ## HITS:1 COG:Cj1229 KEGG:ns NR:ns ## COG: Cj1229 COG2214 # Protein_GI_number: 15792553 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Campylobacter jejuni # 5 295 2 286 297 280 58.0 3e-75 MASTSSLYETLGVDKSASAEEIKKAYRRLARKYHPDINKEPGAEDKFKEINAAYEILSDE KKRAQYDRHGDEMFGGQNFHDFAQGSANMGDLNDILNSIFGGSFGAKSAGSRGGFSFSSF GGGEGFSGFSGSSFGGGFGGAQSLDTHSSIEIPFETAIQGGEMSVRISGETVKFKVPAGI NAGEKLRIRGKGQKSGAQSGDLILEIKIAPSAEYSREGDDLFKTIDVPLKTAMFGGKVEI STPSKSATIKIAKNTKNGQKYRLKGYGVQNRKSKILGDLYAVVNVVLPDVDSLDEDVKAA LQKL >gi|257442819|gb|ACYG01000019.1| GENE 5 9365 - 9676 505 103 aa, chain + ## HITS:1 COG:HP1025 KEGG:ns NR:ns ## COG: HP1025 COG0789 # Protein_GI_number: 15645639 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Helicobacter pylori 26695 # 1 92 1 92 123 122 63.0 1e-28 MHDYDEPVYLISIVSKVLDIHPQTLRQYEREGLVSPGRTEGKMRLYSAHDMDRIRMILNL TKELGVNLAGVDVIFRLQERIAEYEREIEELRARILELGGETD >gi|257442819|gb|ACYG01000019.1| GENE 6 10150 - 11799 570 549 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 1 494 4 494 618 224 28 4e-57 LQKRELMELVIELFLAITALAIVLNIVFKIFEIPTIIGYIVAGVCFSQIYSLSSVENAHM SELAEFGIVFLMFTIGLEFSFHHLMSMKKDVFFNGMLQVLGTGIILALIIDQAFGGNIKT VMIIGLALALSSTAIVLKTLNETGEINQNYGRKVLGILLFQDLAVIPILLMIDIFGSTDN TPVNYLILKTAVSAAIVVVILFVLGKFAFNRFLYYVVRTNSKEIFIATILFTVVGASFLA HVFGFSYTLGAFIAGMLIAETEYKHEIEADLTPFRDILLGLFFITIGMQINFEVIVSHYG LILLAIIVIMALKTVVIYAILFLSTGKRIALKAALSLCQIGEFALAIFSLLMSRDMLSKE NGQILITVVTATMILTPFILKNLNKIANRFESKVEKLEDEEHKTQIPPMKNHIIVAGYGR IGQEVVLRLKDQGLLYVVAESDLELVDLGKSRGENIYFVNIMQKTAIDELHARDASVIIL TIANQQKLDIVAKMLNGSNLKANIIVMHTGADPQSELQSEYGENFIFVKKERVVANALLQ EALKCKLTQ >gi|257442819|gb|ACYG01000019.1| GENE 7 12091 - 12891 235 266 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459403|ref|ZP_05624512.1| ## NR: gi|257459403|ref|ZP_05624512.1| hypothetical protein CAMGR0001_0716 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0716 [Campylobacter gracilis RM3268] # 39 266 1 228 228 423 99.0 1e-117 MAAIFYVLYALVGFYLQIKYHIDWDTRQIIPAIFIAIPVAIITYNANPEFDADETVYLPA PKSQAKIGGAIADKISGEQNFNKTNGEAQATQDETAKFEQNFNDASLEAESIQSKEEALE YGKALTRIAKNLKQKYQLHRLIRFTFASFATTVFLILFLPNSYELHWAFIISVVCTIIFF FSKRRYSKLFVENPKKSNTIFAIENFAIVTLVLYLPLSELLFSQGRSYDNMALILGYLYL PIAPILFITTIVCLARNLSVYKEIKE >gi|257442819|gb|ACYG01000019.1| GENE 8 12758 - 13153 315 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459404|ref|ZP_05624513.1| ## NR: gi|257459404|ref|ZP_05624513.1| hypothetical protein CAMGR0001_0717 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0717 [Campylobacter gracilis RM3268] # 1 131 1 131 131 242 100.0 7e-63 MQMQMQKDKIPADISQIPQEILKSYDRFRFCRYLFFGTLLTFLIYIVVFLAFVNDAPIMS FLCMLALSAINILVCLNRLKYKTYMDTCGCDILRSLCFGRILFTDKISHRLGYTSDYTCY FYRYSGGDNNI >gi|257442819|gb|ACYG01000019.1| GENE 9 13421 - 14230 1113 269 aa, chain - ## HITS:1 COG:PM1310 KEGG:ns NR:ns ## COG: PM1310 COG0500 # Protein_GI_number: 15603175 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pasteurella multocida # 9 265 9 270 270 163 33.0 4e-40 MILASNYDEIDFGALYKAQKAKSSFGKKLAEHWDKKAPSFNEGVMKSAYAREFIDKVDFS DASTLLDFACGAGALSIAAADKLERIYGFDFSPKMLEFAKKNAQTYGAKNIKFAQKAFED DWSDVPACDIVFASRCLEVDDLKTALNKLLSKTKKALYITFKVGGSFVDGDILDAIGREV EQKPDFVYLLNILFQMGYLPSLSYIKAWCHGGAAKSAEEFVQKTRWMLGGELNEAEEARL AEYFNSGKYEPKRDFMHWAFVRVDKTDEL >gi|257442819|gb|ACYG01000019.1| GENE 10 14504 - 14965 462 153 aa, chain - ## HITS:1 COG:no KEGG:LA_0562 NR:ns ## KEGG: LA_0562 # Name: not_defined # Def: hypothetical protein # Organism: L.interrogans # Pathway: not_defined # 2 153 4 150 160 163 55.0 2e-39 MKRWSKLAKRLYELVDESIDFKLHCTVYRMQSRRGSTDLPRYFITLAGEIIFDYPKDFVQ KSGGIKSLAQGALTKIYPYGNDISDIGELIREYIDTPKEELFAKHFDADEWGLANILKAA DKRIGKRRLQILAKNKKNQAMQKVIAARLEALR >gi|257442819|gb|ACYG01000019.1| GENE 11 15098 - 15631 437 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459409|ref|ZP_05624518.1| ## NR: gi|257459409|ref|ZP_05624518.1| hypothetical protein CAMGR0001_0722 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0722 [Campylobacter gracilis RM3268] # 1 177 1 177 177 326 100.0 4e-88 MAEALIQILIVIFSILLLGGIIWTLFCRNLRRLSSSCLAAIDGISEASAIKRLSVRPFLF WLERFFISCESLWFDQNFIYVFDGQKLAARYKFEQILAFEVTKIRINHARIWRIRFAGGA SELERSSANKPEQDGASEYKFVPAASIFEPSFKEFLQILREKNRGAIKTESRFWETV >gi|257442819|gb|ACYG01000019.1| GENE 12 15624 - 16307 837 227 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0717 NR:ns ## KEGG: Vpar_0717 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 224 1 213 215 127 34.0 3e-28 MTPREIFLNGCNEIAANFAYFKPAQKWQKLTKLASDKEILFEIYFGSSMRNYSGSVSILP QIAIYCKRLKKLMQEELSYSTDLVFVSHLGYLTPRKQFRDWQLAGASFEPSVREISAAIK DYALPIFELFEDKQKAVEFMMQRGAKFNKNLSAFDLRPIYFIFYFGGKDAAEAFFNVCLS DCTHKGRFYKLYEELANGAETDFGRSSFWSDTEAKFAFVKGLRILNG >gi|257442819|gb|ACYG01000019.1| GENE 13 16503 - 17249 201 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 218 7 214 311 82 28 2e-14 MRENLIEVRNLRFAYRDKPVLKGISFDVATGDTLSILGANGSGKSTLLRIMLGFLKFEGE VLIAGKSVRDYGKRELASLVAYVPQTHAPSYDYSIFDVALMGALCRTPLFCSFSAADKKL AEQALEKMGIAHLKNAPYTKVSGGERQLAYIARTLVQGAKVIFMDEPTNGLDFGNQIKLL EMIKALGDEGYTFVQTTHYPRHAKFVSSLTLFIKDGEILAFGRSEQLINAENIDKIYGIN YERYEDRL >gi|257442819|gb|ACYG01000019.1| GENE 14 17249 - 18250 1244 333 aa, chain - ## HITS:1 COG:FN0306 KEGG:ns NR:ns ## COG: FN0306 COG0609 # Protein_GI_number: 19703651 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 3 330 7 331 333 228 41.0 2e-59 MSKKAFAFLALLLALCVAGSLLLGKYGFSAEDYARYVTALLRGESLKDFEVMHTLLLEIR LPRILACVLIGASLAISGAAYQAMFVNPLVSPSILGVLSGAGFGAAVGMFFKLNEYLIQL STFGFGFLAVAVALGVSALYSRSGSVIVLVLGGVISGSLFTSLLSVLKYAADPNDALPAI TYFLMGSLGFASKSFIEISILPMCAGVLLLALSGKYLNALSLGEEEAKSLGVNTARVKIF IVLVATFVSALSVTIAGIIGWIGLIVPHIARFIFGADNRAVLASSAMIGAIFLLFCDSFS RLIFTFEIPIGIVTSLFGIPMFIIVLRRTKRSF >gi|257442819|gb|ACYG01000019.1| GENE 15 18261 - 19307 1366 348 aa, chain - ## HITS:1 COG:MA4536 KEGG:ns NR:ns ## COG: MA4536 COG0614 # Protein_GI_number: 20093321 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 26 347 55 384 387 171 30.0 1e-42 MKKIFLFLCAASMLFALSEAQIKDYIAQNSENIEQLQGTPAKIYASSPPLLYMLYALDPA KISGVNFEWNAFERPYVKKEVQEQPVVGGFFGQGKIPNAEMLLRLNPDLILVNASSRNAK KMSEVFGSIKKPMLYLSAVRLEDYLDGFEILGEITGKKERAARLIKYAKESLNLTAQIEE YIKKNNLQEVKIYYAQGGDGLATECEGSWHATLIERAGAQNVHKCSEDPNAKSFGRVKIS FEQLVKYDPDVILIYEKELFDKIYGDPKWQLLSAVKNKKAYYIPREPFSWFDRPPSFMRF LGLKWLINLSYPEAFKFDMVSQMREFYKLFLDLELTDEQIYKILGRAE >gi|257442819|gb|ACYG01000019.1| GENE 16 19693 - 21690 1808 665 aa, chain - ## HITS:1 COG:ECs1693 KEGG:ns NR:ns ## COG: ECs1693 COG1629 # Protein_GI_number: 15830947 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 45 665 44 656 656 320 34.0 9e-87 MKKSCLFAVIASVALHGEIFNLGEIEVTSKIGDKVQESDTSVAVIDEEKMKKNEIKRLSE VAESTPGLQVNKGGGGRAEQTFYVRGFNARRVPVFIDGIPVYIPYDGYIDYGRFTTFDLS RIVISKGASSVLYGPNTMGGAINLITKKPSKELEGEIGYGVESGKSSKTIGNNVDFSIGT KQELFYLQASGSFLEDRGQQLSSKFNKPINGDEDGGRRDNSIQRDKKFGFKVGFTPNETD EYAISYNNQKGRKQAPRYAGRYLDWSNYWDWPMWDKESIYFLSHTQIAGSLYINTKAYYD KFKNDLRAFDDKTYSTQRKRSSFNSHYRDHSYGFGAEVGGDVSDQDTLKFATNYKFDEHK EHNDGEPIQTTKDAMYSFALENTYKFTDYNKLILGADYDIRDSKKAEKYGSILARRPHFY SFPDLKKERAFNYQAAYKHSFDGNDELSLSYAKKTFFPSMKDRYSERFGRTFANPALRPE IANHYEIDYQRIFGETLKLETAVFYSKVKDAFGLRKETRNGQTRNMFVNIDRSTHKGFEF SLGYFATKDLEIGGNYSYLIVTNDNTDAKVYDLPKHKAFLYVDYKITPKLSAYLSQYISS GKYVLSEEETRLAGFGVTNLKLTYEPIENLSIEAGVSNLFDKNYEYDEGYPEEGRVFFSN IRYKF >gi|257442819|gb|ACYG01000019.1| GENE 17 22065 - 22301 66 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHFGVQRAACGVRCIQVQHGIRRAACRARTSALRLTGRSEFCARVGLHDGWLYVKSGILS KIRTLGRSQLKIARLCGL >gi|257442819|gb|ACYG01000019.1| GENE 18 23746 - 24384 862 212 aa, chain - ## HITS:1 COG:Cj0719c KEGG:ns NR:ns ## COG: Cj0719c COG0325 # Protein_GI_number: 15792068 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Campylobacter jejuni # 1 211 1 206 210 232 56.0 5e-61 MRLDEILKRIEAAKAGAGEVQLVAVSKNVGTDEVRELYSQGQIAFGENRVQELKRKSELL RELPLKWHFIGTLQSNKINQLIALRPTLWQSCNSCELALAVNKRLNYPLDTLLEINAAGE SSKTGLDKNRAVEEFLRIKQECKNLNLIGVMSIGAHVSEPAQIARSFEATREIFDALVPH GARICSMGMSDDFELAIKCGSNMIRLGRILYA >gi|257442819|gb|ACYG01000019.1| GENE 19 24381 - 25430 1335 349 aa, chain - ## HITS:1 COG:Cj1068 KEGG:ns NR:ns ## COG: Cj1068 COG0750 # Protein_GI_number: 15792393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Campylobacter jejuni # 1 346 23 367 368 339 50.0 5e-93 MVTVLAISFLIFFHELGHFLAARALGVGVNVFSVGFGEKVFTKRIGATQYAISAIPLGGY VSLKGQEDLDPAAVSTDPDSYNSKGPIARIIILFAGPFFNLLLAFLIYIALGYIGVEKLA PKVGKISSGSAAASAGLMLNDEILSIDGKQIREWDDISKQVTATPLSLEIMRGGERLSLQ LTPKLGEKKTIWRESIRVPLIGISPDYNATVTLYHKGARSLSFAWDQTVEASKLILVGLE KLASGVVSPKEMGGIVAITDITSKAVDYGAAVLLALVALISVNLGLINLFPIPALDGGHI AFNLFELIFRRPVPKRVFVSASYVGMGILALLMIFTVLNDFARILGFYK >gi|257442819|gb|ACYG01000019.1| GENE 20 26282 - 26836 653 184 aa, chain - ## HITS:1 COG:Cj1067 KEGG:ns NR:ns ## COG: Cj1067 COG0558 # Protein_GI_number: 15792392 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Campylobacter jejuni # 2 183 1 175 178 194 58.0 1e-49 MLNLPNILASFRVALAPLFFWLILLAGRANGGMVGSVHVSWIDYFAAFVFVIASVTDFFD GYIARSWNQKTKLGAIIDPLADKMLTLAGFLGLMFIGRASPWAIYLILIREFFITGLRVA MAGDGVEVAASMAGKVKTVFQMIAIGWLTMQWPYANALLWIAVALTLYSGFEYVAAYAKA TKKS >gi|257442819|gb|ACYG01000019.1| GENE 21 26836 - 27615 213 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 254 4 238 242 86 28 1e-15 MTNEFKGKTLVISGGTRGIGRAIVLEFAAAGANIAFTYNSNEELATSQAADLEKAYGIKA RAYALNILEPETYKELFTKIDEDFARVDFFISNAIISGRAVAGGYTKFMRLKPRGINNIF TATVNAFVVGAQEAAKRMEAVGGGSIISLSSTGNLVYIENYAGHGTAKAAVEAMARYAAT ELGEKNIRVNVVSGGPIETDALRAFTNYEEVRDKTAELSPLGRMGQPEDLAGACLFLCSS KASWVTGHTFIVDGGTTFK >gi|257442819|gb|ACYG01000019.1| GENE 22 27616 - 28512 1406 298 aa, chain - ## HITS:1 COG:Cj0806 KEGG:ns NR:ns ## COG: Cj0806 COG0329 # Protein_GI_number: 15792144 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Campylobacter jejuni # 1 298 1 298 298 494 80.0 1e-140 MNKNVIIGSMTALITPFKEGKLDEQTYSKLIKRQIANGISAVVPVGTTGESATLTHDEHR VCIEIAVDACKGTDVKVLAGAGSNATHEAIGLAQFAQAHGADGILSVAPYYNKPTQKGLY LHYKAIASSVDLPVLLYNVPGRTGCDIAADTIIKLFNDCENIYGVKEASGSIDKCVDLLA HEPRLSVLSGEDAINYPILSNGGKGVISVTANLLPDYTAKLTKFALQNEFLKAKQINDDL YAINKILFCESNPIPIKAAMYIAGLAPSLEYRLPLCEPSAENLKKIENVMKQYTIKGF >gi|257442819|gb|ACYG01000019.1| GENE 23 28505 - 29758 1576 417 aa, chain - ## HITS:1 COG:Cj0805 KEGG:ns NR:ns ## COG: Cj0805 COG0612 # Protein_GI_number: 15792143 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Campylobacter jejuni # 5 416 4 415 416 482 56.0 1e-136 MFPKFKKITLQNGLQIYHIPMNKGSGVISVDVFYNVGSRDETMGKSGIAHMLEHLNFKST KNRKAGEFDAIVKGFGGVNNASTGFDYTHYFIKCASSNLEVCLDLYADIMQNLSLKDKEF QPERKVVLEERLWRTDNDPFGYLFFRLYNAAFLYHPYHWTPIGFRKDIENWSIKDIKEFH AKFYQPQNAVLLITGDIGEKAAFDAAKKYFAPVKNESEIPRLHCTEPAQDGEKLSVIYKS SEAQIVAVAFKIPPFNHADAAAIKAMDIYLSGGKSSLLQRVLVDEKKLANQINIYDMSGK DENLFIVFAVCNQGVSGEALRSEILALIEKAKKSKISDDDMLKIKNTLSSDLIYSLDSAS KVAQMYGSYIVRGDLDALFKLEREIKSLDKNAVKKAMKTYLSLKSSTSIILRKENDE >gi|257442819|gb|ACYG01000019.1| GENE 24 29758 - 31404 1643 548 aa, chain - ## HITS:1 COG:Cj0804 KEGG:ns NR:ns ## COG: Cj0804 COG0167 # Protein_GI_number: 15792142 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Campylobacter jejuni # 1 351 1 352 352 421 59.0 1e-117 MNYDTLKKIFFRFDPETAHKIAEFGLRALYATPGGLEALAKFGVYKDEILTQNIWNLSFD NPVGIAGGFDKNATMIAPLAALGFGHIDFGTFTPRPQSGNEKPRLFRLVSEQSIQNAMGF NNEGADVIERRVRKIYPFKIPIAANIGKNKATSNEDALSDYEALGRKFNGLCDFFIINVS SPNTPNLRALQENSFISELIGAMKKITNRPLVLKLAPDMSADQAIALCECAVQSGASGII INNTSVDYSLSPNARDFGGLSGRVITEKSRELFAQVARELFGRTILISCGGIDSAQEAYE RIKSGASLVQIFTAFIFKGPFVAKSINEGLAKLLRADGFNSIGEAVGVNLKDRAGEGYGI RNDQTENRGDGADLRACEDKEAEAKTDEISKTTSKSDVSSKRGKISKDVTQKDAAQKDTP QDNDDVQDNASQKKDADAKNLSKSSAKSENLEAKKAKQSGTASKAAKSKTATNAAPKNGI ESKNSKTKAAPKSSAESKSSKAKNVKRSSAKTKKAEVKEAKELKETREASGSQDAEQNSS KKRKAKKD >gi|257442819|gb|ACYG01000019.1| GENE 25 31757 - 32986 1077 409 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459436|ref|ZP_05624545.1| ## NR: gi|257459436|ref|ZP_05624545.1| hypothetical protein CAMGR0001_0749 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0749 [Campylobacter gracilis RM3268] # 1 409 1 409 409 627 100.0 1e-178 MLIYCALNAAFALLGLALCGSGFFGTGSFGVQALAWLLSLEAGFLGAFGAVYFSFRAYRN KIEDELRAGKYDEILRQSPKNSSDFISGKTSANDTNSASCGGENRGGTGGSDEISYSEVY GGEILKSESFRGVNLGAEISNAQNSKGAVNFTSGDSCVENDDSHALYDETAAECAANSAA NINFTHSSNLDAECDKIATGECDINSTESSRDETSACGITALEHTAADKFNMKDGATCSD SYGGINDEASDSSQGGIGARCGDLKNVASSDLGGGLDSSERSDGADRSNHSDGTDSGNRG GDVDSGKPGDGTSDFGGGIDGPRDGSNDDFDGADGSIDGWDDECERGEVRSNFAGAFFSP FKILSYAALVAAIYLLAKLSLLNPLAIILGVAIIPLGTMIVAFADKDAR >gi|257442819|gb|ACYG01000019.1| GENE 26 32998 - 33297 499 99 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1033 NR:ns ## KEGG: CHAB381_1033 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 97 1 93 93 97 58.0 1e-19 MRVTKNLNKIVKGACDISLGISIVVAIGIGVAIGLGLRHLTGSLLLLWLGIAIGIAAAFL NVYRACKALNSSLKELEDDPKYKADPKNFDDDDEWDERD >gi|257442819|gb|ACYG01000019.1| GENE 27 33329 - 34600 1468 423 aa, chain - ## HITS:1 COG:Cj0853c KEGG:ns NR:ns ## COG: Cj0853c COG0001 # Protein_GI_number: 15792191 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Campylobacter jejuni # 1 419 1 420 424 508 60.0 1e-144 MNNHDEFLAAQKLIPGGVDSPVRAFGNVGGEPFMVDRGEGSYIYDVEGKKYLDFVQSWGP LIFGHADADIERAVVQTAKKGLSFGASSPLETQLASLVLKNFDFLDKIRFTSSGTEATMS AIRLARAFSGRDKILKFEGCYHGHSDSLLVKAGSGASTFGNASSAGVPQDVAKNTYLARY NDIQSVKDVLAQNDIGTIIIEPIAGNMGLVPADPEFLTELRALCDEKKIVLIIDEVMSGF RASELGSYGIYGVRGDLVTFGKVIGGGMSVAAFAGKREIMDMISPLGAVYQAGTLSGNPV AMAAGIASLSKIYASSDLYERLGELARRLTDGLCAIARHRGIALQTACVGSMFGYFFADE EVRDYDGALRADTARFAKFHGEMIKRGVFLAPSQFETGFICATMNETQIDFALNAADEAM AAL >gi|257442819|gb|ACYG01000019.1| GENE 28 34597 - 34989 525 130 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1035 NR:ns ## KEGG: CHAB381_1035 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 10 127 9 119 119 155 66.0 5e-37 MRNFIFLALFLNAVIFFLPRSAQAESFITDEEYGAMLYKNPRGIGCDKCHGEKGEGSLIA TYKEFNRTAGAYYERALNAPPINALSLQELADGISSSRDVMPSYFLTQNEIIIIYKYIKS INQPKKKEKK >gi|257442819|gb|ACYG01000019.1| GENE 29 35040 - 36281 1296 413 aa, chain - ## HITS:1 COG:Cj1226c KEGG:ns NR:ns ## COG: Cj1226c COG0642 # Protein_GI_number: 15792550 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 4 410 3 411 415 331 47.0 2e-90 MKVRSSIFYTITFIFALAAVGVSLALLWLIGYDQQNYTRELNSKYSIVARANLYQMSKLI SDVEYERQVANFEFSTIRDEAKRDEIIKGAEILDSISADIGSADILLFKRKHYLKITHAG ETRLLNDKEYQPYRYDIFKAIYGVILVIILLAYIFIIRKIRPLRKLKRQIDKFAKGDLQI KDVSVGNDEISEVSHAFYEAVTQINKLNESRHLFLRNIMHELKTPITKGRIAVEMIERGK NQERLISVFERLESLINEFAAVERATAGTALGECGIFSMDEILKEALSIAMIEPGCVTLQ NPLGLSLNVDLKLFCVAVKNLIDNAVKYAADGKILIRLNAETMDFITLGEPLQKDFSYYK EAFVKGTNAKQSFGLGLYIVDNIAKAHGLKFLYRRQDELNVFYFEGIEKIAAL >gi|257442819|gb|ACYG01000019.1| GENE 30 36783 - 37460 828 225 aa, chain - ## HITS:1 COG:Cj1227c KEGG:ns NR:ns ## COG: Cj1227c COG0745 # Protein_GI_number: 15792551 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 1 225 1 224 224 290 65.0 1e-78 MTKILMIEDDLELAEILSEYLQQYDIDITVADDPFLGLSKLNLENFNLVILDLTLPGMDG LEVCKEIRKNTDIPIIISSARHDLTDKINAFDFGADDYLPKPYNPQELLARIKRHIERYD INSIQRAAKPKKDLEVDDFRHVISFKGQPLSLTIAEYDVLSYLIKKEGGAITREELIYNC SSISEESSSKSIDVIIGRIRLKLGETSKAPSYIHAIRGVGYKLIQ >gi|257442819|gb|ACYG01000019.1| GENE 31 37787 - 38083 408 98 aa, chain + ## HITS:1 COG:Cj0913c KEGG:ns NR:ns ## COG: Cj0913c COG0776 # Protein_GI_number: 15792242 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Campylobacter jejuni # 1 98 1 98 98 92 62.0 1e-19 MKKADFIQVVADKAGLSKKDTVNVVDSALEAIKELLVKGDDISFIGFGSFGIAERAAREG KVPGTNRTYKSPATKVVKFKVGKQLKEAVAAAKGKKKK >gi|257442819|gb|ACYG01000019.1| GENE 32 38358 - 39791 1533 477 aa, chain + ## HITS:1 COG:Cj1037c KEGG:ns NR:ns ## COG: Cj1037c COG0439 # Protein_GI_number: 15792364 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Campylobacter jejuni # 2 473 4 475 481 709 75.0 0 MIRKILIANRGEIAVRIIRACRDLHIKSVAIYTKPDIDCLHVKIADEAYEVSADALKGYL DAKKIVEVAKECGADAIHPGYGFLSENFDFAREVEDAGIIFIGPKPDVIRKMGNKNIARY LMRKNGIPIVPGTEKLNHESMDTIKKYAREIGYPVILKASGGGGGRGIREVWEEKDMESA YDSCTREAKTFFNNDEIFMEKLVVKPRHIEFQIIGDNYGNIIHLCERDCSIQRRHQKIIE IAPCPSISEHLRKTMGTTAVAAAKAVNYTNVGTVEFLLDDYNNFYFMEMNTRIQVEHGIT EEVTGVDLVVRQIRIANGEILELEQSDIKPHGYAIEARITSENVWKNFTPVPGTVSDYYP ALGPSVRVDSHIYKGYKIPPFYDSLLAKLIIKTTDYDLAVNKLERALKEFRIEGVRTIIP FLLSISKSREFRLGFFDTSYVEKNLDKILENTMDDMQPNKNEAIAAIIAAMRKSARI >gi|257442819|gb|ACYG01000019.1| GENE 33 39800 - 40084 397 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459446|ref|ZP_05624555.1| ## NR: gi|257459446|ref|ZP_05624555.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 94 1 94 94 103 100.0 3e-21 MDFLDSLKDIKKDMLKDKAASSAPKKPKKRDSNRDEFKDIFRDDDSSSQSESGLDGVVTE ELDVAKESIAARENRLKDEFLKYVDAANIKKLND >gi|257442819|gb|ACYG01000019.1| GENE 34 40077 - 40811 836 244 aa, chain + ## HITS:1 COG:Cj1035c KEGG:ns NR:ns ## COG: Cj1035c COG2935 # Protein_GI_number: 15792362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative arginyl-tRNA:protein arginylyltransferase # Organism: Campylobacter jejuni # 1 239 1 238 239 227 49.0 1e-59 MTEIPFCTLDFACPYLDGRAARSEYLYVKDCDFEYNSSLVQHGYRRFGRYFQKPICATCA ECKSLRIDAANFKFSRSHRRVYKNNRTTAYIWQSRPLLNDARLELFALYHDYMHLKKGWP LQEIDFERYDEIYVQGHGDFGKEISYYGEDGRLICVDLIDIVDDGISSVYCYYDPYLPHL SLGKFSLLKQIEFAQDLGLRWIYLGYAVKQCQSLAYKFSYEPYEILNSYTELDAPAVWEG RVEG >gi|257442819|gb|ACYG01000019.1| GENE 35 41238 - 42056 899 272 aa, chain - ## HITS:1 COG:no KEGG:Cla_0124 NR:ns ## KEGG: Cla_0124 # Name: not_defined # Def: ATP/GTP-binding protein # Organism: C.lari # Pathway: not_defined # 1 271 1 278 278 169 36.0 9e-41 MKKVLLSCALAGALFGLEIDGFSAPSGSLITDDAFYIANRGSSEDPQERDGFISRIVKNS NVVETKFISDLINPGGMAQIGDVLYVCDLDAIRGFSKGQEVFNLKIEGAQALNDVVALGS EVLLASDPARGTIWRIDLLSRTADEFVRIDPSLGSPNGLLAKGDKLLITTFDLSGKVLGR VLSMDLKSREISIFANMKGVFYGIVRGKNGEILISDWGEDLLSGKIWRIDANGQIRKINL GAMQRPADISSDGKVLLIPKTLENKVELINLP >gi|257442819|gb|ACYG01000019.1| GENE 36 42821 - 43543 300 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 4 234 9 238 309 120 34 8e-26 MHKLEVRGLKKTIKGTPIIKGISLELYNGEIVGLLGPNGAGKTTTFYMICGLISASGGDI LLNENSIAKVPLHKRAKLGIGYLPQESSIFKELSVEENLMLAAEITYKNKAEASRKVDEM LNLLNIEPIRLRKGVSLSGGERRRCEIARSLMITPKFLLLDEPFAGVDPIAVNDIQSIVR DLSDLGIGVLITDHNVRETLAICDRAYVIKDGELFAGGTAKEIASDPNVRKFYLGEDFSI >gi|257442819|gb|ACYG01000019.1| GENE 37 43536 - 43943 392 135 aa, chain - ## HITS:1 COG:Cj0668 KEGG:ns NR:ns ## COG: Cj0668 COG0802 # Protein_GI_number: 15792022 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Campylobacter jejuni # 6 132 3 133 135 134 51.0 5e-32 MSKSFELICGEDEISRLVQALPKSGIILLIGDLASGKTTLARAIVRAHGLDEHVSSPTFS IMQNYGQIYHYDIYNGGCEGILKNGLFENLFEEGLHLIEWADENLINLLKKYELDFCVVR ITPHAQGRKYEVSYA >gi|257442819|gb|ACYG01000019.1| GENE 38 43927 - 44172 258 81 aa, chain - ## HITS:1 COG:Cj0667 KEGG:ns NR:ns ## COG: Cj0667 COG1188 # Protein_GI_number: 15792021 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Campylobacter jejuni # 1 81 1 81 81 99 62.0 2e-21 MRIDKFLNAVNITKRRAISEDMCKSGVVAVNGAAVKPAKELKIGDVITISFLDRKQSFKV LAFPSAKNTPKSEQAKYVQEL >gi|257442819|gb|ACYG01000019.1| GENE 39 44261 - 45484 1585 407 aa, chain + ## HITS:1 COG:Cj0665c KEGG:ns NR:ns ## COG: Cj0665c COG0137 # Protein_GI_number: 15792020 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Campylobacter jejuni # 3 407 2 406 406 661 77.0 0 MAKKDVKKVVLAYSGGLDTSIILKWLGDTYGCDVVTFTADIGQNEDLEPIKNKALKLGIK KENIFVEDLREEFVRDYVFPMFRANAVYEGEYLLGTSIARPLIAKKLVEIAKKTGADAIS HGATGKGNDQVRFELGAYALNPDIKVIAPWRLWDLNSREKLLAYAKKNGIDIASKPGKSP YSMDANILHISYEGLVLEDPAHAPEEDMWRWTVSPKNAPDKSEIIEIEYKHGDPVKLNGK ALKPHEMLAALNELGAKNGIGRLDLVENRYVGMKSRGCYETPGGTIMLKAHRAIESITLD RGAAHLKDDLMPRYAELIYNGFWFSPERLLLQELINKSQEHVNGKVKLELYKGNVTVLGR ESKSDSLFNTDFVTFEEDKVFNQKDGDGFIKLSALRFIIAGKNGRKL >gi|257442819|gb|ACYG01000019.1| GENE 40 45666 - 46109 517 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154147953|ref|YP_001406621.1| ribosomal protein L9 [Campylobacter hominis ATCC BAA-381] # 1 144 1 144 147 203 70 6e-51 MKVLLIKDVKGLGKAGEVKEVKDGYGNNFLIGKGYAKAATTEVLRKFEADKKKQAELEKY EVASLQKLAEELAKIRVKIVKQTGESGALFGSVTKDEIATALKEQKGIEIDKKILETEAI KTTGIYDVNVKLKHGISAKFEIEVASV >gi|257442819|gb|ACYG01000019.1| GENE 41 46102 - 46650 543 182 aa, chain + ## HITS:1 COG:Cj0663c KEGG:ns NR:ns ## COG: Cj0663c COG5405 # Protein_GI_number: 15792018 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Campylobacter jejuni # 1 181 1 180 180 274 81.0 8e-74 MFEATTILAYKGAKGSVIGGDGQVTFGNTVLKGNATKIRKIGKEGNVLAGFAGSTADAFN LFDMFEKCLDGAKGDLLRAVIEFSKQWRKDKYLRKLEAMMLVLDRKNIFLLSGTGDVVEP DDGKIAAIGSGGNYALSAARALDKFASLDEEELVKQSLKIAGEICIYTNENIKTYAIWDE KR >gi|257442819|gb|ACYG01000019.1| GENE 42 46632 - 47966 1109 444 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 5 444 6 466 466 431 48 1e-119 MGRKEMMTPKQIVEKLDEYIIGQNSAKRTIAVALRNRYRRMALEDEMKNEVMPKNILMIG STGVGKTEIARRLSKMFGLPFIKVEASKYTEVGFVGRDVESMVRDLAAASVNLVRGEEFE KNKDKIDDYIKRKILEKVLPPLPRGASEEKIADYEKSYEKMAAKLERGDLDDLSIEIEVS ENALESNPNLPPEMANMQESFIKVIGISTRKSKKEMKVKDAKVALKSEASEKVLDMESIK AEAVRRAQNEGIIFIDEIDKVAVSSGNSGRQDPSKEGVQRDLLPIVEGSSVSTKFGNIDT DHILFIAAGAFHISKPSDLIPELQGRFPLRVELDSLDEAALCEILTKPKNSLLKQYSALL KTEGVELEFSEDGVKAIAKFAASTNEKVEDIGARRLHTIMEKVLEDISFEADKFKGQKIV VDEKLVSEKLAGIASDEDLAKYIL >gi|257442819|gb|ACYG01000019.1| GENE 43 48480 - 49349 953 289 aa, chain + ## HITS:1 COG:Cj0661c KEGG:ns NR:ns ## COG: Cj0661c COG1159 # Protein_GI_number: 15792016 # Func_class: R General function prediction only # Function: GTPase # Organism: Campylobacter jejuni # 1 284 1 284 291 294 55.0 1e-79 MKSGFVTLIGRTNAGKSSLLNYLCGEKISLVSHKINATRRKINGIAMNGTDQVIFTDTPG LHESAKLMNKLMVEVALGAIEGCDLVLFLAPVHDDTAEYEKFLNLNAGIKHIVILTKIDE VNDEKIVQKLLQYQKFTDKFEAIIPVSIKKKVYKKQVLDEICKILPEHEYFYDPEILSAT NEREIYRDFILEAIFESMSDEIPYCSDVVMEKVVEKPGLTSVYARIITDSNSHKEMLIGK NGEAIKRIGIRAKKLISNFSKVKIYLKLTVFVKKSWKNDEFMVKTDFIY >gi|257442819|gb|ACYG01000019.1| GENE 44 49412 - 50932 1853 506 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1059 NR:ns ## KEGG: CHAB381_1059 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 505 1 508 512 565 59.0 1e-159 MAKNSKNASSIVAINKVTQTIFGLSENEVFEHDFSKANRAKETYVSYIPYKDIMTATVEI SRSVEDADLLDAIVVKVYEELGLDTALDYKITYSEVIGAGGDDRIFNVFVVDNAKLTSEF DAIAARTNYIDYVAMAPFLYEGLYNRGVLTRDGIDCFIYLQRDDAFLVVYQNGEYFQSRQ VRYNLKFLHEKYVELVGSRVDEESFYRLLSKQGVNLENPTERDYMIQIFDDMFYYINDVL NGISKIYNVNIQNVYIGTDIGKIPAIEVFVENNLKLRYKDFNFNVAINAKDYPLTQLDIL MFLVGQDYLVTKDDDHNYSPFMRPPPLTQRSTGKLIGYMLLGCLLGAVYPAYNFGYGYYN NMVANDKTSEYQGLEDQMVPARAESARLDKETKEVNAQAAKSGKELNDRRELINAISDKK NNYAMKGVSIFELTNMVVKNKGNMVRIGDENRTLTVQVRTKNDKQMTELLEDISKKEGYG VDTKTIALQEGNKTVFYDSNISVEVK >gi|257442819|gb|ACYG01000019.1| GENE 45 50932 - 51585 573 217 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1058 NR:ns ## KEGG: CHAB381_1058 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 217 5 219 220 153 39.0 4e-36 MKKKSSLDQLDQWFASKGNSANNYFYIALLFVGLVAYFILSNYADPYLEESETNLSTATT KLEGAQREYNEFFGGDPEAFVNNKRNILNGAKTNLNNIIEERGYLDDKLNEISKLTYNEK NWAKFMDSLSTIAENNNIKIYAIHSDRREPSIKQIFQPEALLDIDVKFEGAFSNVLRYIN LIEQSEMIVDVNKMDINATKNGKIGGSIGISIWGVNY >gi|257442819|gb|ACYG01000019.1| GENE 46 51585 - 52013 367 142 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1057 NR:ns ## KEGG: CHAB381_1057 # Name: not_defined # Def: transformation system protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 142 1 136 136 112 45.0 6e-24 MKKLILCSLLLSATLFAVDNNQTVAPSNGAYKAGYDAIFDNLSKPRVGLSDEQIASLQDP FYPKEANAPREANQQVDLGYQLVDIMGDKVKLNDKWYGLGEYVGSYKIVQITGNSVIITN DDENKVELTLKQGSQNVIITYK >gi|257442819|gb|ACYG01000019.1| GENE 47 51991 - 53499 1261 502 aa, chain + ## HITS:1 COG:Cj1474c KEGG:ns NR:ns ## COG: Cj1474c COG1450 # Protein_GI_number: 15792789 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Campylobacter jejuni # 32 494 19 468 472 383 45.0 1e-106 MLLLHISKKLSIAAMLALSVTATSLYAAPATAGNCDRKALNIKINDTVTLNEMLTQLSDM CRFSVVAKDAIAQEEMSKPLQGVSIKDLSLREVLDLLIKENNLSYEYSHGILKISALETR TFKVDYITSIREGIAVTKSSVDSAPTKVDDSDDKENKEDNKITTKEKFDFWEKISEEITS VLNNGTEKYVAVAPIINQNAGLVTVTAMKSQIARVDRYLSGMQKRLSRQVLLDVNIISVE LNNEYTTGIDWSKFQLGFNTYVGGDPTKLSGYHIDNGNRGKASDTHGTWTIGANLNFNID GLINFLETKGKTKIISSPKVTTMNNQPAIISVGDTINYVLKSTTTGDYQGGDTQSDDQYS IFVGILLNILPEISDDNRIMLRINPSLSSLKYAEDNVRKENGRRDIAPDTLQKKLSSVVW VDDGDTVILGGLIGATKSKNNTRVPVLAEIPLIGNLFKSTADILSTSELIFVVTPHIIDN TGAPLATSLKELGYSKSIYENE >gi|257442819|gb|ACYG01000019.1| GENE 48 53492 - 54322 715 276 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1055 NR:ns ## KEGG: CHAB381_1055 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: Lysine biosynthesis [PATH:cha00300]; Metabolic pathways [PATH:cha01100]; Biosynthesis of secondary metabolites [PATH:cha01110]; Microbial metabolism in diverse environments [PATH:cha01120] # 1 276 1 277 277 419 80.0 1e-116 MSNNYTAIKEIFIEDNEVSDFVNLDKSTLAYHKILNALQKPLKLILFYGKPGCGKTFLLN KIKVDLEKKVRVVFVPQPFFDEKEFFLELYSQIFHSTPSEPIDNYENFMRVYRERFGIST NVGAVEQVVILLDEAQLYPGNLIEKIRLMADTRLFKFLFTVHKTDEEDRLAKDYFKTRIW ESIELPNSNLGEVKLYIEKKLVLHGFQQYYFMFSDDNFDLILNLTDGNMRNINKLMYKMY ELFEYYEVNKPTEISFSQINNKIIEMAAIGSGIINA >gi|257442819|gb|ACYG01000019.1| GENE 49 54315 - 55322 804 335 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1054 NR:ns ## KEGG: CHAB381_1054 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 335 1 354 354 241 51.0 2e-62 MLEFYEVNELEKKWEEYNKNRKQFSFLKSKPNFVLRFDKTILGLLILISVAIGAIFWLLK DSDSVSMASINQNIEDKGGATNSASDAEQQAADLAVQNNISKEDYNISAPKVARTSKHEK ERPSLNLNDVGVLSSEDSGGFKITNNYENGGNYGGQAQAQNFGGQNFGGQNFGNQNAPTF NVPNANNAAFANQPPKNEVIDFGRAPLPPKSNFSGGSTNTASSAPLSSRIEIKTSNLSED KQSLESKFYATNKIEYSLSLAEEAYNKKDYDNAIKWALTSNELDKDNVASWIIFAKANYK KGRKEDALYALETFNAKAKNSEISNLISKIRSDKL >gi|257442819|gb|ACYG01000019.1| GENE 50 55319 - 55858 535 179 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1053 NR:ns ## KEGG: CHAB381_1053 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 2 179 3 180 180 231 66.0 1e-59 MKILYILAFAIASLFAVSADDVRNWDQIGQYNRICQESVRNLFIEEQSEALANMYAKACL KMDKVNELVVPTVMLYKTKEARENASLYSTIVFQKKMLYLALCDGVDISYIRTPKINYIL SEIFDKFTERAYVKKSDTYVFTLENGERAELFIKEEEEVKKMVIAIYAGDKLSSIKIYW >gi|257442819|gb|ACYG01000019.1| GENE 51 55864 - 57612 1634 582 aa, chain + ## HITS:1 COG:Cj1471c KEGG:ns NR:ns ## COG: Cj1471c COG2804 # Protein_GI_number: 15792786 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Campylobacter jejuni # 55 581 8 519 519 398 41.0 1e-110 MTKIEEQIVAILIRNNILTSTVVPEIKDKMDIGLTLGEVLVGDNYLSQDDFCSILVELYK RRQIEFDDISEKFSMDPKEFLQILAKKMNLSYMNLDDIDIDFRLSERTPTAQLKRYGVIP VKADDLNIYVAFSDPFNLESQDKAQAMFSKQLLKIVVADPNQVNKYLSKLELSESIKGLV AEIRKELANTGGSGSSDDTSAILKLIEMIISQSIKMRGSDIHIEPTENNCVVRTRIDGML AEIFIFDKDIYPPLVSRLKLLSNMDIAERRKPQDGRFSMKISGREYDFRISTLPIINGES TVMRILDKSKVIISLEKLGMHPDSFKKFNNAMKAPYGIILVTGPTGSGKSTTLYAALNDI KNIDTKVITVEDPVEYQVNLIQQVQVNEKAGLTFASALRSILRQDPDIIMIGEIRDQETL RIAIQAALTGHLVFSTLHTNDAVSAIPRIVDMGIEAYLISGALIAVEAQRLVRKLCPHCK QPTNLPKSMLDQLKEFLPEKYTFFKAVGCDQCGQTGYMGREMISEILPITDKMQSLIANG GSKDDMRALAKEEGFIDMFEDGVIRAARGVTSIEEIYRVAKQ >gi|257442819|gb|ACYG01000019.1| GENE 52 57609 - 58853 1165 414 aa, chain + ## HITS:1 COG:VC0406 KEGG:ns NR:ns ## COG: VC0406 COG1459 # Protein_GI_number: 15640433 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Vibrio cholerae # 75 413 69 406 407 197 32.0 2e-50 MKKQLEVEYNAKGARRKMFLQASDKVQANNLMKQRVGGTIVKRGETQVVANTGGDFKAQV SRMLGGSGRVRTLPLVASIRQLSVMTNAGISIHDSIKEVARAAEDKTLKEIFSAMNDDLN AGLSLTESTEKFRGQLGDVVVAMVSLGEATGNMAESLAKLAAMLQELWENQRKFKKAMRY PMILMIVMAIAFSVLMMYVVPKFREIFEDLGADLPLPTRILLGIESTLNNYGIFVLAGII GTIIALRWAYRNNPEFKKGFDKTILKVYLFGKIIFFSTMSRFMLIFTELVRAGIPIADAL DTSVLMVDNHTLKEKLSTVKIAVQQGVSLTEAFNNTGLYESMLIQMISAGEQAGNLDKML GNVTDYYKEKFDDIIDNISSYVEPIMLFFMAGMVLLLALGIFMPMWDLGKAVKN >gi|257442819|gb|ACYG01000019.1| GENE 53 59237 - 61255 1984 672 aa, chain + ## HITS:1 COG:Cj0886c_2 KEGG:ns NR:ns ## COG: Cj0886c_2 COG1674 # Protein_GI_number: 15792216 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Campylobacter jejuni # 176 671 80 573 573 687 72.0 0 MVQSSLFGASGGAVGSFAVDGLRRMIGSVGVWIFNITIFVLSLVLIFEDRFTDIIKNCFI GSRDESSRDEIGDDFASDADAAQRGGLARYSSAQGLRGAENFNASNDALSGEENSAKQGN FAEQGASGRGFEGERNLQNLNDAREPENEQNFGDAQGLQASTERELKMPQKGKPSRLKRV ERLSEVAENKRLLDQLDKGRMSKPKDFKLPPLDFLNLPPKKKSSIDESEIDRKIYDLLDK LRKFKIDGDVVRTYSGPVVTTFEFRPAAHIKVSKILTLQDDLAMALRAQTIRIQAPVPGK DVVGIEIPNQNIDTIYLREILESDVFKSASSPLTIVLGKDIVGQPFVTDLKKLPHLLIAG TTGSGKSVGINAMLLSLLYRNSPKSLRLIMIDPKMLEFSIYNDIPHLLTPVITQPKQAII ALSNLVAEMEQRYSLMAQNRTKNIDNYNEKMLREGGEILPYIVVIIDELADLMMTSGKDV EHYIARLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISFRVGSKVDSKVILDQMG ADSLLGRGDMLFTPPTAPGLIRLHAPFTTENEINKIAEFLKAQESVVYDERFLIENEGAK QEGGIINPQNIVLDELYDEAKAIVLEEEKTSISYLQRRLRIGYNRAATIIEQLEQMGVLS EINAKGQRDIIK >gi|257442819|gb|ACYG01000019.1| GENE 54 63156 - 64316 1250 386 aa, chain + ## HITS:1 COG:Cj1038 KEGG:ns NR:ns ## COG: Cj1038 COG0772 # Protein_GI_number: 15792365 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Campylobacter jejuni # 1 386 1 387 387 319 45.0 5e-87 MRTDKWLYYFTCALITIGMIFSLSLSSYTVLLLGATPLHFFYRQCAVGIACIAVMWIVSR ADPDKCLTPVCMSLFAIMGILMLAMGFLPKSLVADVNGAARWIRLPFFNLAPVEFFKVGF IYFLAWSFSRKLDHSKKSIGREIATLLPYVALFGFVVILVAIVQNDLGQVAVLGLTMIFM SLFAGTSFKLIGFSFMGILGLAYVFIVTSAHRVDRVRSWWGGVQDFVLSFMSPETAAGLR IEDASAPYQVGHSLNAINNGEFFGQGLGLGSFKLGYLSEVHTDFVLAGIAEEWGFIGILL IVVLFYAMLFRIFQTASKSPSNVNFLFCLGIGFMFFFSFIINSYGITSISPVKGIAVPFL SYGGSHLLAASFAVGLVLMASKRAKF >gi|257442819|gb|ACYG01000019.1| GENE 55 64455 - 65468 1068 337 aa, chain + ## HITS:1 COG:Cj1039 KEGG:ns NR:ns ## COG: Cj1039 COG0707 # Protein_GI_number: 15792366 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Campylobacter jejuni # 1 334 1 334 342 309 47.0 4e-84 MVIAISGGGTGGHLIIAKNLAAHLAKQGIRAIFIGSNRGQDRAWFENSELFARTYFLQSS GVVDKKGLAKLASLLNILRLSLVARKILKQNGVRALISVGGYSSAPASIAAILSRVPFFI HEQNAVCGRLNRLLRPFARAFYSSYEKPAFAYPIADIFFETARQRTALKRVIFLGGSQGA SFINSLAVELAPKLLGLGYGVIHQCGEREFERISQTYAQQGLDIQLVGFCKNMHELIASA DLCVGRSGASTLWELCANGLPAIFVPFPFAAADHQFYNAKFLKERGLCEILRQQDASGER ILSLIESFDVARASKGLLELVDRNGAQAIIDDVMSKI >gi|257442819|gb|ACYG01000019.1| GENE 56 65701 - 66612 459 303 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459484|ref|ZP_05624593.1| ## NR: gi|257459484|ref|ZP_05624593.1| hypothetical protein CAMGR0001_0798 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0798 [Campylobacter gracilis RM3268] # 1 303 1 303 303 557 100.0 1e-157 MNNEEIIQRINELREKRGKNLKSSNENVCETDANADLNADAAVNLTEKSGAGSAANLSQK PSPKPSVATARNKQSFKDADLRAPRNNRSTPKILPLVVVCIVAIFIAIKAPFRTEILNKT RIPINQANEDTNKNPKEISIHTKDGTLKMKNPVRFREDCDGGDGDACAVLSSLLLLNGEI SQEGAKDLLKKGCYELNGGESCTRLAGYEDRDSQESRKLYKKACKLGNGEGCFMFGYVAY FDDDDKETGTRYFERSCELRFAEACYFLVGIYSNDPAKSQRYQALFEKYQQENDDAIISF RRR >gi|257442819|gb|ACYG01000019.1| GENE 57 66946 - 68787 2519 613 aa, chain + ## HITS:1 COG:Cj0518 KEGG:ns NR:ns ## COG: Cj0518 COG0326 # Protein_GI_number: 15791880 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Campylobacter jejuni # 5 613 2 607 608 657 57.0 0 MAKKKFKTEVNDLLNLMIHSLYSNKEIFLRELISNASDALDKLNYLCLTNDEYKALSYVP RIDIKIDKEAKTLSIGDNGIGMDEAELESNLGTIARSGTKGFMASLSGDAAKDSNLIGQF GVGFYSAFMVADRIEVISRKPLSQDAFKWSSDASNYAIEKAQKEDFGTTIILHMKDEEFL DGYRLEGIIKKYSNHIPYPIFMDKEEYVPAQKEGEQGHSEVKNVQINRASALWQLPKSSL KPSDYNEFYKQISHDSGDPLFYIHTKAEGTHEYTTLFYVPSSEPFDLYRVDYQSGVKLYV KRVFITDDAKELLPSYLRFVRGIMDVEDLPLNVSREILQENRILAYVREQSVKKILSELE KLLQNDREKYIKFYELFGRVLKEGLYGFGANKEEILKLCLFKSNLRDGLITLSEYKEKMK EGQKEIYYIAGNSAAMLKSSPLIEKFNTEGTEVLLCDDEIDTIVMPGVFEFDKTPVKNAT SIKQEASSDDAATPQAKEIAARIKEILGERVKDVKISSRLSGSLSCLVFDENDPDFATQQ LLKQMGNRNLPPIKPILEINADHEIIKKLQVDKLMLPQVSEIIYDLARLSEGQELENPSE FIKNVNELIAKAL >gi|257442819|gb|ACYG01000019.1| GENE 58 69237 - 70628 1739 463 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_2207 NR:ns ## KEGG: CCV52592_2207 # Name: not_defined # Def: metalloid reductase RarA # Organism: C.curvus # Pathway: not_defined # 1 460 1 456 458 500 59.0 1e-140 MKLIKLSLAAAVCACVVSSLSAAESVAEAITNGKLGGTVKTTYANKTVDNRGEAATGDND YEAFGVGLELGYVTDPLYGFRIGLTGQGWLMPYHVGSSNKAAYDKEWYTKGAVLSELYLG YGIGNTDIKAGRQYVVTPLVAGNYTRAFKEAFEGVAISNKDIPDTTLWGGWFYKFQGRSK TAMGAPAGEGKAPLFKDRVILGNMTGPVAVKFENIFSAYVQNKSLPYTTLTGAYAAVTDV KPANALKEGDVSLYLAEANVKVPVGEILKLGFDLNYKGSRVDGGLEPRRLDGDMFGARVS VSEFFGFGLSYAYTTVSDDDAVILGVGNGPGSYTALPIRGPFVFTGYAGMDTHKIVLDYN FGAIGLDGFKTALHYVKGDQDRVGGTNNINASGAAGQRVGTSMDIEGWAVTANYAPKAVK GLSLGVTYTALERSDHYASGVNRKFDENEIWLQAAYKFDLSGK >gi|257442819|gb|ACYG01000019.1| GENE 59 71250 - 71939 781 229 aa, chain - ## HITS:1 COG:STM3823 KEGG:ns NR:ns ## COG: STM3823 COG3005 # Protein_GI_number: 16767108 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Salmonella typhimurium LT2 # 7 174 9 179 394 74 32.0 2e-13 MDGGDAMRISKKLLALIILISGIIGFFVVVPVHYALEKTSTDKFCDVCHEMDPMVIAYQD DVHSGKGKTGIKAQCVDCHLPHDNIVKYVYQKAKNGVLEGYSHFFDEPEKFDWNKRREER EHYVFDNGCTSCHATVIDSKITSEQAQRMHAHYKKLLGTERELKCASCHVSAGHGIGLRN YLEYWRPTYKIYEKKMMEEKIKAKKGFFGDEYKPSAEEQAFMDASSAKK >gi|257442819|gb|ACYG01000019.1| GENE 60 71918 - 72349 326 143 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1830 NR:ns ## KEGG: CCC13826_1830 # Name: not_defined # Def: flavocytochrome c heme subunit # Organism: C.concisus # Pathway: not_defined # 1 143 1 144 144 209 75.0 4e-53 MKNFSFTALFLCCIIATLFGAPSANDANATNIVVSDELRAKYKIKPHHEHLSFDCVDCHI NQGSDPSKFKSIGDKGCISCHGDKKQLALRLKFMDTLKANPHNSVHDGPTLYCDECHNEH KASTNMCTECHEHEVPQWMGVTP >gi|257442819|gb|ACYG01000019.1| GENE 61 72429 - 73970 1814 513 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 16 513 16 477 484 199 33.0 1e-50 MQRRDILKMGMVGAGALALGAVNAQASAVDAKDVKFDEEWDVIIIGSGFAGLAAGLKAAQ KGNKVLILEKMGRIGGNSVINGGGMSVPMNPVQEKTGIKDSKELFMNDCLKAGLGINHPE LLSTLADRGLDAFKFLVDNGVQFKMDHCAHFGGHSVARSMLTTNDSGSGYIQPMLEKFEA LKDKGCELRRRAKFDDFVMDGERVAGVAIREEYKFDPNLYSDDLENTSGTKKTLKAKKGV VLAAGGFCRDKIFRKLQDPRIPDDVDSTNHPGATAGVLLKAFEIGAYPVQVDWIQFGPWA SPDEKGFGTAPILTQQGTFKYGIAVDVRTGKRFMNELADRKTRADAEFKILREDPKAYPI TFADTKMAFKDLSEEVISKGMASGKLVGECASLDEIASKYGVPADALKQSVKKYNEGVKA KKDEFGKQESALSEINEAGPFYVIRLSPKPHHTMGGLKINTKAEVLSSKTNKPIPGLWAA GEITGGTHGASRLGTVAITDCIVFGMIAGEQIA >gi|257442819|gb|ACYG01000019.1| GENE 62 74111 - 75022 917 303 aa, chain + ## HITS:1 COG:CAC1046 KEGG:ns NR:ns ## COG: CAC1046 COG0583 # Protein_GI_number: 15894333 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 297 1 300 303 108 28.0 9e-24 MSLRHMEFAVKISELKSFTKAASELGIAQPSLSKSIMLLEKELGIEIFDRKNGLELTYAG EIYIARAKNMLRLNKELNNEIRGLSSIKTGKLVIGATSTSFKFIEKIIAVFCSRFSKADI RIVHVHSEPALIEMLKSGELDIVYAAHFGELVAEGLECEFIKKRRLLLSVCSSHPAVSRA SINSTEKYPKISLSEFKSDKFAISSKILKSESNFKKIFENAGFTPQIFCDTSYFYVANAM VAAGLCVSFSFARYIFETQKDYITLFDVADEPLLDVSFSVVYKKPSKLAKEFIKMIKAGK SSE >gi|257442819|gb|ACYG01000019.1| GENE 63 75260 - 76249 1321 329 aa, chain - ## HITS:1 COG:BMEII0895 KEGG:ns NR:ns ## COG: BMEII0895 COG3258 # Protein_GI_number: 17989240 # Func_class: C Energy production and conversion # Function: Cytochrome c # Organism: Brucella melitensis # 51 326 24 302 314 242 44.0 7e-64 MRKTALVLALPLFFTPVLGFDVAKLNAKKAVPYEQKTQEFRLPVGIDENGVIDEAKLGDS PYAKTVIYGAKLINETTRYLGPQAKDEKMRFAGNNLSCSSCHTSGGVVPDQSPFVGIYAR FPQYVARSDQLVTLQDRINGCFQRSMAGRAIPTNSKEMRAMIAYMHWLSAGYEVGAKVRG QGLPKAQFLDRAADPKKGREIYAAKCAACHGENGEGIKNEAFAQNGDYYTFPALWGDDSY NTGAGMYRLIEGARYVKATMPKGDASLSWEEAFDVTAYINSKPRKIKPDRKKDFPDLDVK QMDMDVGPYNDGFDENDHRFGPYKRMIKK >gi|257442819|gb|ACYG01000019.1| GENE 64 76365 - 76844 -125 159 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459497|ref|ZP_05624606.1| ## NR: gi|257459497|ref|ZP_05624606.1| hypothetical protein CAMGR0001_0811 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0811 [Campylobacter gracilis RM3268] # 16 159 1 144 144 208 99.0 1e-52 MHRDMLLQISRRNTNLRLVFRRHAATRFCKRLVCGGAVGAARIKYTAVAYERNARLNFTR SLLRKHLHALRIYTRRGARIRDAKNEAVCARDAKYRGAKYRGAGSGRAVHETSRKAKRLL GLRSRRPSKIGFFKISPARRSQKSAFNFFSPAQILKSAL >gi|257442819|gb|ACYG01000019.1| GENE 65 77625 - 78803 1518 392 aa, chain - ## HITS:1 COG:Cj0762c KEGG:ns NR:ns ## COG: Cj0762c COG0436 # Protein_GI_number: 15792100 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Campylobacter jejuni # 5 390 2 388 389 451 55.0 1e-126 MKLTLSSRVSKLGESLTIAISTKAKQMKAQGQDVVILSAGEPDFDTAEVAKKAVIEAMAK GCGKYTPVAGTPEILNLIAQKLKRDNGLNYRPDQIITNVGAKHSLFNAFSCILNEGDEVI IPAPYWVTYPDIVKFCGSKPVIVDTKAENRYKITASQLKAAITPRTKALCLFNPSNPAGA VYSRQELQELAEVLKGTDILVIADEIYEKIVFGKSFIAAASISEDMFGRTVTINGLSKCG AMPGWRFGYTACAIDELNKAMISLQSQSVSNVASIVQAGAMPVLRGEADDYIEEMRREYE RRRDFGTDAIGAIPGLSVVKPDGAFYFFIDCSQVEPDSMKFCMQLLDKGLVATVPGSGFG MDGHFRVSFACSMENLKRGFERIEKFVKNYHI >gi|257442819|gb|ACYG01000019.1| GENE 66 78800 - 79279 364 159 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459502|ref|ZP_05624611.1| ## NR: gi|257459502|ref|ZP_05624611.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 159 1 159 159 303 100.0 4e-81 MKKALFFIICAILSASGSDVNSAKNSANDARISLVKSLYIKDTYFGDHKNALSASFRSVL MQDEASAGEGEVGCLDYDPIIGGQDVCDDAKYDFELGQRDTVVVTQTCPYGAQTIIYKLV RSGGDYKIDDIYDQDPSSGRAFSVKNQILNCLNQSKEHQ >gi|257442819|gb|ACYG01000019.1| GENE 67 79290 - 79985 802 231 aa, chain - ## HITS:1 COG:Cj0763c KEGG:ns NR:ns ## COG: Cj0763c COG1045 # Protein_GI_number: 15792101 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Campylobacter jejuni # 1 170 1 171 212 249 66.0 4e-66 MSFWQILKQDFIEPMRQDPACNSVFEIFFCYPGVWALINYRFAHFFYERGFKLVARAISG LSRIITAVDINPGARIGRGVFFDHATGLVIGETAIIGDNCLIYQGVTLGGVSLEHGKRHP TLQNGVVVGAGAKVLGNITIGENSKIGANSVVVKDVAPNCTAVGVPARILGGCESDPLAH NKIPDISQELIKYLIKRIEILEDCICSGRKDISAMDEDLNKFYEEYLKSLK >gi|257442819|gb|ACYG01000019.1| GENE 68 79982 - 81820 2185 612 aa, chain - ## HITS:1 COG:Cj0764c KEGG:ns NR:ns ## COG: Cj0764c COG1166 # Protein_GI_number: 15792102 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Campylobacter jejuni # 1 611 1 609 611 911 73.0 0 MSDYGLNIWGNSNFTIDGGKLCLNSDFKQPLVDIIKEIRADGVRGPILLRFPHLIKKQIV EIYSNFNRAIKEFGYKGKFHAVYPLKVNQFPGFVRNLVDIGEPYGYGLEAGSKPELLLAM AYNKYGAPITVNGFKDKELINIGFIAAEMGHNVTLTIEGLNELETIIETAKERFAPKPFI GLRIRLHNSGSGLWAKSGGINSKFGLTSTELIEAINLLKKNDLIEQFTMIHFHIGSQITE IHPLKKALIEAGNIYTELRKMGAKNLKSINLGGGLAIEYSQAKESSSRNYTLKEYANDVV FLLKSIAEDKKEAEPDIFIESGRYVAASHAVLVAPILELFTQEYAEEKLALKKDNPPVVA ELYDLYKTLKPSNALEYLHDAMSHMESVLTLFDLGYVDLIDRSNGEILVHLIMRKAYGIL GNKQEYSNFLNSLGNAQERYLVNFSIFQSLPDFWGIKQHFPIMPLERLDERATLSASIWD ITCDSDGEIEFDNQKNPLFLHDFDPEKEEYFLGFFLVGAYQEVLGMSHNLFAHPTEATVI LKDDGGFEIKDFIESQSVIDILEDMDYDVVDIRESLNERVEKSNLIGDKEKKHILGELYL FLNDNSYLKTIK >gi|257442819|gb|ACYG01000019.1| GENE 69 81817 - 83058 1356 413 aa, chain - ## HITS:1 COG:Cj0765c KEGG:ns NR:ns ## COG: Cj0765c COG0124 # Protein_GI_number: 15792103 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 406 1 405 408 446 56.0 1e-125 MIKALRGMNDILDEQARIYSQILNVCERVARNYGFCLIETPKLEQTALFRRSVGESSDIV GKEMYEFSDKSGDSVCLRPEGTAGVVRAFIEKKLDRSGGVHKFYYQGSMFRYERPQKGRL REFHQFGVECFGQSSVYEDASVILMLAQILRELNVAATLKINSLGDEECMPAYKTKLVNF LQEHKDRLCEDCQRRIDTNPIRVLDCKNESCQKILAAAPLITENLNDACAAEFTQLQKIL TQNGQKFQIDAKLVRGLDYYCKTAFEFVSSELGAQSAVGGGGRYDRLVEFLGGRKTAGVG FAIGIERIAEILKTREAPQEREGIYIGALDEAFVSTAFSFALKLRKFCKTQISYEPRSLA KHLKAADGAEAKFCLCIGQDEFDRAEVWCKNLEDQSTFAIKFKEVEAFFKDRA >gi|257442819|gb|ACYG01000019.1| GENE 70 83228 - 83710 779 160 aa, chain - ## HITS:1 COG:no KEGG:Fluta_0862 NR:ns ## KEGG: Fluta_0862 # Name: not_defined # Def: hypothetical protein # Organism: F.taffensis # Pathway: not_defined # 5 160 3 144 151 64 29.0 2e-09 MAYVTYDKAKWHWGAKNAPEGIPQENGATHIAFFFRWCMERKLYSKDFAADFADDIARMD DSFDYRGYFFGAMDGVLGSDELNTAGKAFANAYYTTDRTKFAKTHGWYLQDYDDFVARKF GDKNFDNAYFYIENSPQNYAEIKEIIDRRYEEFLSFKAAK >gi|257442819|gb|ACYG01000019.1| GENE 71 83922 - 86882 2746 986 aa, chain - ## HITS:1 COG:Cj0464 KEGG:ns NR:ns ## COG: Cj0464 COG1200 # Protein_GI_number: 15791828 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Campylobacter jejuni # 567 984 184 603 607 494 56.0 1e-139 MIFEAKDAATLQKAGITTLLDLALLLPKSFDDLSVGDAPCAGESTAEVECLFQHRRGSML IVTAHCLSWEREIKIVIFNAKSWHFGAFKRGKKFFIHGKCDESFGSWQFVNPKIVSEPGR IAPKYKAALSDAAAQKLIKKYLSADALLACGLHADEAAVLLALHESSPRSVRMLAALNRQ LKEGGAENFGERDDVSNSGRIPSGSEILNGGISNSDKILNDDGISDNGEIPSSQSSAAEI LNGRSQNDEIFGGKISVQPQGDKILACEVSRGAANEILSGGISKSAETSLPPSLRDDEIA SDKILDGDQPRVRCAEIYNDENFDVQSGTDFLAVYGAEARGDEISNNLKADNDAAANNDK ISNDLVFDVQAAARPADAQASTAQPMLEHVATEQSIAAQQNSSTQDVDTQFATTQTQDVG RQPAAIQTSGVRIADLQPVAAQTQEVSGKPTAIQTSSRVASAQAATTQTLSAQATGAQPV CNQTENLQTVVAVRTATAKPTIAQTASAEAVQDALAAPMNTSRDCAAQATTAIPTIAQIA SEAETIHAAETVRAAAVTQMSGTAILRTLKFVEILNYLQKLSAKKTSFPAQIYPLRDISD WLASLPFEPTRDQLSAIKDIASDLQSPLARRRVVMGDVGSGKTLVILASAAMNYPRISYL MAPTSILAEQIYAEARRLLPPQIKVLLVKSGDREPNFADAHLIIGTHALLYHELAPSNLI MVDEQHRFGSNQREKIARLTENGEFRAHFIQFSATPIPRTLSMIQSELVSFSFLKQLPFE KRIKTKILQNDGFTGFMQDLRRELAAGNQAIIVYPLVQQSESSVYQSLEEAAPFWKAQFA DVMITHGSDKDKEEILRRFRDDGRLLITTTIVEVGISLPRLSVILIVGAERMGLASLHQL RGRVGRKGQAGRCYLYTKLKSPPQRLREFAATLDGFKVANIDLKNRQGGDLLGGSVQHGA MFAWYDYEEDVTAAAKQRLKDIGRGA >gi|257442819|gb|ACYG01000019.1| GENE 72 87527 - 88786 1787 419 aa, chain - ## HITS:1 COG:Cj0463 KEGG:ns NR:ns ## COG: Cj0463 COG0612 # Protein_GI_number: 15791827 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Campylobacter jejuni # 14 410 7 405 406 253 38.0 7e-67 MEKKEISLKAKGGKSAKIDFLYQFDDSLPVASFKLIFKASGAVSEKTLGLARICAGVLGE GSKTLGVSEFHRKLDIRAVEISAASNFETFGIQVNCLKEHFDFGLDMLRELLKEPNLTPS VLEKLKMQTIGELAVLKSEFDYIATCNLKALLYPRTRLAQPLIGDEASVERITMKDVREF FASLSLENLYVVLCGDVSDKNPKIAEILSLFASGKKRELPFFAPSDAKKIKIQKEQTQQA YIYFGAPFTLPKEQEFIANTALFVLGSSGFGSRLMERIRVKHGLAYSVYARGDFELSRRE FWGYLQTKNENLQNAAALVKEEIAKFIASGVSEAELKSAKKFLIGSAVLQKETMFKRAAI AQSEYYKGYAFGEFERNLKRIETLKLGALNDFIKSHDEIMNLSFSVICDEAAAKKGLKI >gi|257442819|gb|ACYG01000019.1| GENE 73 89234 - 90283 1122 349 aa, chain - ## HITS:1 COG:Cj0462 KEGG:ns NR:ns ## COG: Cj0462 COG1060 # Protein_GI_number: 15791826 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Campylobacter jejuni # 1 348 1 348 348 535 71.0 1e-152 MKRLSIDEALNLIEHADLNELGRAAFARKRELHPGRVTTFIIDRNINYTNACMVDCKFCA FYRHASDADAYVLSFEQISEKIEELIAVGGTQILFQGGVHPKLKIEWYEDLVEFIRKNYP SITIHGFSAIEIDYIARLSGISTLEVLRRLQAKGLYSMPGAGAEILSDRVRELVAPRKSD SATWLRVHEEAHGIGMKTTATMMFGTLESTREIVEHWDKIRELQDRTGGFRAFILWSFQG QNTRLLREHPEIKKQSPNRYLRLLAVSRLFLDNFKNIQSSWVTQGSYIGQLALKFGANDL GSTMMEENVVKAAGASFRMSKDEMIALIRDVGEIPAKRNTNYDILETYA >gi|257442819|gb|ACYG01000019.1| GENE 74 90286 - 90660 396 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459513|ref|ZP_05624622.1| ## NR: gi|257459513|ref|ZP_05624622.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 124 1 124 124 218 100.0 1e-55 MFEKSSVERLKKISDKISSILNKCEDGVAQALADEDVLQPAIMMQFINIHALLKGLQESN DLQALAIFSKDEIRAINAIRNIASHEYERLNFELIEIAIKDYLPTLNQKITSALKPYRKG KSEG >gi|257442819|gb|ACYG01000019.1| GENE 75 90653 - 91003 270 116 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0146 NR:ns ## KEGG: CHAB381_0146 # Name: not_defined # Def: nucleotidyltransferase family protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 11 116 2 106 106 81 47.0 9e-15 MSAKTAPKKTINSKDEILKFLSSQKKRLFAVGVTELGFFGSYAKGSADEFSDIDIAIETD GAKMVKKLGNPLSALVFLDDFKKKLSSKFNVNVDLCDTTSLSREEKAKLLQGAIYV >gi|257442819|gb|ACYG01000019.1| GENE 76 91005 - 91577 720 190 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1030 NR:ns ## KEGG: CHAB381_1030 # Name: not_defined # Def: nodulation efficiency protein D (NfeD) # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 133 1 133 133 127 52.0 2e-28 MNALIFIIIGVILAIVELLVMDFTFIFFSAGFFITGLLSFGFHLDWDVQILLSFVLSFVL LIALKRPLKSRFFKPKEKHEDNFLDESGTGTVKNGMVYFKSTFWKSDEISDLNEGDRVEI LGVKNGQIVVKKDSSRNSSGAGGVNLNDGDANLGDADSTGTDDKNSNVAASKSAQSSGAK EEAPEDLKEA >gi|257442819|gb|ACYG01000019.1| GENE 77 91574 - 92494 1166 306 aa, chain - ## HITS:1 COG:MTH692 KEGG:ns NR:ns ## COG: MTH692 COG0330 # Protein_GI_number: 15678719 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Methanothermobacter thermautotrophicus # 23 297 19 294 318 192 41.0 6e-49 MEGFVTTVIVFCVLIAAILKMGVKIVSQSEILIIERLGRFHKVLDGGFHIIVPFFDAVRA KMSVREQLVDISKQQVITKDNVNISVDGIVFLKVIDGKMALYNVEDYRRAISNLAMTTLR SAIGEMSLDNTLSSRDQLNSKLQIALGDAADNWGVKIMRVEISEISVPHGIEEAMNMQMK AEREKRAIELKAEAEKAALIRNAEALKQEKVLEAEAIERMADAKKYEQIALAQGQKDAMD SINLAMSASSFAAEYLLAQGRVNAFSELSKNPSKDKILIPYETSELIGSLSVLKEFLGKN GAKDAK >gi|257442819|gb|ACYG01000019.1| GENE 78 92613 - 93803 1162 396 aa, chain + ## HITS:1 COG:Cj0461c KEGG:ns NR:ns ## COG: Cj0461c COG0477 # Protein_GI_number: 15791825 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 2 391 1 390 395 319 46.0 7e-87 MIRYIVLLRHSRNYRLLFSAGFICMFGLWFSVVGVATLLIELGAPVWAITAVGVVSFVPN VFLAPINGIIVDKFQPKPLMTAMFITEMISIFMLIFIDSLNYLWLLLLIVVVRSVAGTLF FQTESSTLPKFLSRPYLKLANEMTGIIWTITYTFGMASAGIFIHYFGVRAAFILDFCLYV FSFFILLRLNFKDLARNAPGPVFKMLKEGFSYLRSHPLVVHLIVLHAFVAVTTYDNLIAL LAKYKYKEILSASLVIGLMNMSRSAAAFFGQIWLSKIVNKHTFFWLLLGQFAGIALWAVL EFNYWLSFAGMIAAGFFITTVWSYSFTQLQSHVDREFFGRVIAYNDMAYFIVATLVSAAI GFFFELGFSLSQITFGMGFMFAIAAFYYKFLIYEKI >gi|257442819|gb|ACYG01000019.1| GENE 79 93814 - 94905 918 363 aa, chain - ## HITS:1 COG:Cj0850c KEGG:ns NR:ns ## COG: Cj0850c COG0477 # Protein_GI_number: 15792188 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 1 363 20 382 395 276 45.0 6e-74 MFIGDALVIASAGIMLKESGHSELEIGLISAFFFLGAIFSGFFVPYIIGALSYVRAYAVF TALFGIAAMLHDLGSNLVYWAILRFILGFCYYALLMIIESWINSKITNSIRSRVLAIYEA VFYGAFAIGVIILALNFGTMKVFVLSAFFIILALLPVNLIRFNPPRVPARMRVSMPQISI VPPLAFATVVCAGILINGFFSMASVFVLSAGLGVGSVGAFMGSAMAGGFLAQLVCGTISD KFGRKRAIMIVCAVGLTSCTALFFAKSFILTCALALLLGFGAFPLYSLAIARANDSITGE GASRVQISAAMLFIYSSASLCSPLIIGAMMKFLGANGFIWVFFAAMSFLFIFAIFRPEIA PKR >gi|257442819|gb|ACYG01000019.1| GENE 80 95557 - 97278 239 573 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 350 556 146 351 398 96 31 1e-18 MNGFKTLLSRFKPYFRDYKPQFALAILGMVMTSVATAASAKLVEPVLNKIFVEKNEPYLY TLPIAIIVVFAMKSGGAFMQNYFTAFIGQDTVRRFRDRLVASLVRLDVDFFNRFRTGELI SRTINDIERIRVVVSNMIPDFFTQIITILGLLSVVIYQSPKLSFFALVVFPCAIYPLSRL AKRMKKISRESQEKTSDISSALSQIYSNIEIVKASNAESFEVEKFNAENRKFFGLNLKAV VTTCLVSPIMEMLGAVGIAVVIIVGGQEVIAGQMSIGSFFSFLTALFMVYTPIKKVSSLY NNMQDAIAASERTFELIDLEPTIVGGGKQMGEIGSVSFCDVSLNYGDKAALKDINFGVKK GEILALVGNSGGGKSSVVNLLMRFYDASSGKILFNGNDEIGEFSIPSLRENIGLVSQRVY IFNDTIAQNVSYGAEFNEQRVIEALKLANAYEFVSSMKDGIYTVLSEFGANLSGGQRQRI AIARALYKDPQILIFDEATSALDNASEKEISNVIEKIKQSKIVFVIAHRLSTIERADNIA VMKNGRILAIGTDAKLTGECEEYRSLKGIMQNG >gi|257442819|gb|ACYG01000019.1| GENE 81 98269 - 99699 1684 476 aa, chain - ## HITS:1 COG:Cj0802 KEGG:ns NR:ns ## COG: Cj0802 COG0215 # Protein_GI_number: 15792140 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 472 1 458 462 496 54.0 1e-140 MVIYDSLSKKKLPFKPISDGLVRIYACGPTVYDDAHLGHAKSAVSFDLLRRVLQAEGYEV KFARNFTDIDDKILKKMEQSGKSLEEITEFYTRRYLQDMSALNVADASISPKATENIAAI CELISSLLQKGFAYEIAGDGIYFDTRKDGDYLSLSGKKEGAGKNIARVASNDAKHDEKDF VLWKFDENWFDSPFGKGRPGWHSECVAMILAHLDSGDPQFCIDIHAGGADLLFPHHENEA AQCRCARHRALSKYWLHNGFVQVNNEKMSKSLGNSFFVGDALKIAPGEALRFYLLSSHYR ANFNYSVTDLLASKKRLDKIYRLKKRVRDILTPVAGQNSAPKLPAAEVKFRSEMMEFLSD DLNTSGALAVLDSFVASANEALDRAPKDKALKARIAANLEFAKQTLGILYEDETEYFRFG VSEQQRAQIEELIKQRAQAKAEKDFASADAIRARLTDMKIEVMDTTSGTVWEVAAE >gi|257442819|gb|ACYG01000019.1| GENE 82 99686 - 101083 506 465 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 [Vibrio campbellii AND4] # 1 457 5 468 520 199 31 1e-49 MLRGFFTNSAGTLVSRVLGFVRDLLTASVLGAGIYSDLFFVAFKLPNLFRRLFGEGAFTQ AFLPSFTAARKKGIFAAAVLIKFSIFIALLTALVLLAAPVFTKVLAYGFSAEQIGLAVPY VRINFFYLTFIFVVTLFASLLQYRDHFATTAFSTALLNLSMIAALLLARGKDGATAVLYL SFGVVAGGLLQLAVHVYALKFTGMLRVLTGGFARLARGDKAQTQGFYKNFFAGVLGASAL QLSSFIDTFFASFLASGSISYLYYANRIFQLPLALFAIALSTAIFPRMSKFVKAHDDAQA LALVERGFYFLLALLGLSAIGGVMLRNEITQLLFERGEFTRQNSIECAAVLGAYMVGLVP FGLSRIFSHWLYANMKQKLSAKISIWCVFINVALCALFFKPFGAVGLAFASTITGAFLLG FNLYFFGFNNFLAIIRAKKIIAIAALCAGEAAILYILKGLYYGNL >gi|257442819|gb|ACYG01000019.1| GENE 83 101338 - 102267 819 309 aa, chain + ## HITS:1 COG:Cj1646 KEGG:ns NR:ns ## COG: Cj1646 COG0767 # Protein_GI_number: 15792951 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Campylobacter jejuni # 63 309 123 369 369 243 53.0 5e-64 MALMIKNALAGKRVSLVEDSCKAAKILSFMDDKTIDFSYVPESRRLNFLAQIGLYCHLGI LGLLSLASFLGEFFSKLAAFIIHPMKFRFKETVNFIKDSGIDALFIVSLTAFLIGIVLAY IGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGRSASSFTAQIGVMKITEEIDAM RTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQMIVCDAYLDIAFSDYLDRFKAS VELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIGEYTTISVVNAIFWVIAIDAVF AVLFSEIGL >gi|257442819|gb|ACYG01000019.1| GENE 84 102210 - 103034 220 274 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 1 258 104 353 398 89 31 2e-16 MGHCDRRGICGFVFGNRTMSEQMQSSGTSKIIVARDVTTAYGSRIMHDRVSFSIKRGEIY GFLGGSGSGKTTLMKTLIFLKRPQSGEIKIFGRDIWRASEAEQNEIRLKCGVMFQFGALY SSMSVLENVGVLLREYSKFSEREIDELSMFWIQKVGLKKEAAALSPNELSGGMKKRVALA RALALSPEILFLDEPNSGLDPLSARALDRLVCELRDSLGVTVVMVTHDVDSIFDILDRFL IVDNQKIAFEGSIEEISSLENNPLEELFKMRQKD >gi|257442819|gb|ACYG01000019.1| GENE 85 103553 - 104440 1100 295 aa, chain + ## HITS:1 COG:jhp1357 KEGG:ns NR:ns ## COG: jhp1357 COG1463 # Protein_GI_number: 15612422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Helicobacter pylori J99 # 2 281 16 267 271 89 23.0 8e-18 MICVAALTAFMWWMLTKTDRGESYRSYYIHTKELPVGIKENSEVKFIGVNAGIIKSIDFA DIENAIIEIEISVKSKLPISQDSVAKVESQGISGIAFINITKGSGKLFPPNDKKPIIALD KTLLDKIGSKAEVITDSVSEMIFKINGLLSKQNTDKVDRILSSMDKFSAELSDEKKFQSL DALLANVNTLIANLNEREKELDALLDNLNAFAVSAANLSNSLDKTAGIITKRIDRGEYNL KAILDPTLEEAKNTLGELKKSLREFQGAMFRLEDNPYDFFFKDTSKSADRDDKKE >gi|257442819|gb|ACYG01000019.1| GENE 86 104443 - 105006 398 187 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175220|ref|YP_001408231.1| 50S ribosomal protein L5 (BL6) [Campylobacter curvus 525.92] # 1 183 4 188 192 157 42 3e-37 MKNFIKFTLAATLAAIFLGGCLAKQAKPYTYYELRYDQKRCVNPSGARKNIFIDTITATD LVDRRDILIVDFRNRTRFASDAKFITMPSEMVYKALLDAAFSTCSLNPIFVPKERDLRLK TSIVALQINNDQATVTMGYEILNSLESIKSGIVTKRVFVPDPSSQSIYNALNLALNESIN EILKALR >gi|257442819|gb|ACYG01000019.1| GENE 87 105003 - 105557 556 184 aa, chain + ## HITS:1 COG:Cj0799c KEGG:ns NR:ns ## COG: Cj0799c COG0632 # Protein_GI_number: 15792137 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Campylobacter jejuni # 1 184 1 183 183 172 51.0 2e-43 MIAAIEGIITRKEPTACVIKCASGVSYALSLSLNTSAKLTQGKLTELACVQILREDADLL YGFLDESEKKMFETLIKLSGVGASTAMAVCSTLAPQDFARCVATGDAATLTSVPGIGPKT ARRIIAELGDAKLMEFGPSETYKNEAASALQSLGFKRDKINQILAGCSSTNTSDLVKEAL KKLA >gi|257442819|gb|ACYG01000019.1| GENE 88 105581 - 106612 1052 343 aa, chain + ## HITS:1 COG:Cj0798c KEGG:ns NR:ns ## COG: Cj0798c COG1181 # Protein_GI_number: 15792136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Campylobacter jejuni # 1 343 1 343 346 332 52.0 7e-91 MKFGIVFGAQSYEHEVSIISAIAVKNALKGWDLEFVFCDKNRKFYRIEDKNMRAAYFKQG SYAKAKELSIGAGGFFESGMFSKSMLEVGTYINLIHGCDGEDGKMAALFEFFGIPYIGPR IEASVLSYNKILTKHLAAIANVKTLPYEIVNRTSLPNFNFPIIVKPAHLGSSIGISIAKN ESEFSYALDQAFELDDSAIVEPYWENVKEFNLAGAKIDGKIVFSNIEEPKKEGYLNFDRK YLDFSRSGAIEPARPGALLEGKMKDAFTRLYNAGSFDGALIRCDFFEKEGEIYLNEINPN PGSLANYLFDDFSEVLAALASSLPPMRQIPVSYELITKITANK >gi|257442819|gb|ACYG01000019.1| GENE 89 106673 - 106891 354 72 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1153 NR:ns ## KEGG: CCV52592_1153 # Name: not_defined # Def: general stress protein 14 (GSP14) (EC:1.6.99.-) # Organism: C.curvus # Pathway: not_defined # 3 72 5 76 76 72 62.0 4e-12 MINQDEIYTATEIVRNFSTVLNKIKNQEIKKALIVKNNKFEAVMISMSEFERLEKAVELL KAVYAKRSSGGE >gi|257442819|gb|ACYG01000019.1| GENE 90 106881 - 107612 621 243 aa, chain + ## HITS:1 COG:Cj0796c KEGG:ns NR:ns ## COG: Cj0796c COG0596 # Protein_GI_number: 15792134 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Campylobacter jejuni # 1 238 1 238 239 210 49.0 2e-54 MASKELVCGGESYKISYEISNLQRAEYILVLHGWGANKALMSRVFSDKFRRYAIVCVDLP GFGASSQPARALGSEDYAEIMRAFISALGGQPAAIMGHSFGGKIAALLAPRNLILLSSAG IIEPKPFAVRAKIAIFKILKRLGLAGLWRAFASKDAAGMSKTMYETLKNVVNEDFRDIFS ALSPQNALIFWGKDDRATSLKSGELIHSLVKNSKFYPLAGDHFFFLQSAEFIGEQIEKEL SGS >gi|257442819|gb|ACYG01000019.1| GENE 91 108464 - 110242 1794 592 aa, chain + ## HITS:1 COG:Cj0795c KEGG:ns NR:ns ## COG: Cj0795c COG0770 # Protein_GI_number: 15792133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Campylobacter jejuni # 1 327 3 309 475 279 47.0 1e-74 MNIIFLIAHAAFVLMLGFYLITCLQWFSYKPARIIFHFTKPAWHLYFLILPLAAYFGCEI AAGLCAAKFGLASLYTLRAAKILIVAAYALALYFWQRGLDKKLVFTPRVKRFFAILAVCV FSFNAAFYAAGGPILPIFLPLGAALAASFAYERAQAAKFKAAARKKLAQMPSLTIIQITA SYGKTSIKNFLYQILKSDFRCYKTPRSVNTLAGLVRDVNEALPTDTQIYIAEAGARLSGD IAEITEFLAPQIVVVGEIGAQHIEYFKSIENIRKTKLEALISARLKHAFLHSSTQKSADE RVTIYDEGLEICGADLDGIKFSLSLSDDESGASGENSVPRAETSAAEGEGQGDLSLDAGS AACAEKDKNSKNYGADFDDANSMSRAERSEREFYEQAARAASDDKICGDKERGVQEAPNG RREQGKRHEFFAPILGKFNAANLAACIKIARFLGLSTDKIKSRVAHVGAVEHRLARLDAG GKIIIDDSFNGNLSGMLQSYELMRSYGGHKVIITPGIVESTREDNETLAAKIDKIFDLAI ITGELNSEVLQSRIDPKKTIVLKDKRDLQRVLSENTHSGDLILFSNDAPSFI >gi|257442819|gb|ACYG01000019.1| GENE 92 110489 - 111169 692 226 aa, chain + ## HITS:1 COG:FN0805 KEGG:ns NR:ns ## COG: FN0805 COG4912 # Protein_GI_number: 19704140 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Fusobacterium nucleatum # 31 225 47 249 251 87 31.0 2e-17 MDLQENMLGQLRALSEEKFAQFSQRLIPAPQILGVRTPALRALARKSFAALSTADEARRE LQKYKPVFHEEFVLKSFFIMLFKQDETKFALASDFIKTMPNWAVCDMFAPKFKNAAFADA LLKQAKSGADEFERRFFYVYFMRNMDAITPEEFFEICAAESDERYYVQMGAAWAIAEMFI KQREITLAFLESKRAVKFIQNKAISKIRDSFRVSKAEKDALLKYKI >gi|257442819|gb|ACYG01000019.1| GENE 93 111268 - 111636 490 122 aa, chain + ## HITS:1 COG:no KEGG:CA_C3526 NR:ns ## KEGG: CA_C3526 # Name: not_defined # Def: FMN-binding protein # Organism: C.acetobutylicum # Pathway: not_defined # 1 122 1 123 123 134 51.0 1e-30 MFSKEFLEILNYECAVGIATCAHGEAHISNTWNRYLVIKGDRILIPAAGMKKTQSNVEAN PNVELSVATKELAGRFGAGRGFVVKGTARFIDSGAEFEETKAKFPFATRLLEITASSVKQ VL >gi|257442819|gb|ACYG01000019.1| GENE 94 111912 - 112685 232 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 252 4 238 242 94 32 6e-18 MKRLEGKTAVITGGSDGIGLGIAKCFAKEGANLILLGRSVEKLKIAQEALGGYDVKAYAI EADLAQSKTIKDLCERILALPLKIDILVNNAGLGKFVPFEATDEALLDAHLNLNVKAPYL LTQALLGALATSKGCVINISSYFANRMLVGRTTTAYSITKGALNSFTKSLAFEVGKLGVR VNAIAPGSVLTPQFQRNLSALSPQGREAFEQMVQNIYPLGKIGSAQDIGDAAVFLASDAA KWVSGAIFAIDGGLTTN >gi|257442819|gb|ACYG01000019.1| GENE 95 113061 - 113654 595 197 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_2199 NR:ns ## KEGG: CCC13826_2199 # Name: not_defined # Def: putative transport-associated # Organism: C.concisus # Pathway: not_defined # 19 196 14 191 191 231 60.0 2e-59 MRVLFLAILAVFLLSCAALFSSCAAPLAPAGNALSVYDIYSVARDRRSVSEVASDKLIQT KIQSKILFTKGLSSWDLEVECFYGEVYLIGLLDSEEMREPLLALARQTEGVQRVHTYLRV KKPEYPCNSFEIFTNLKKNLFSDTDVSGTAVRVAIVGCDVVFSGVVTDIEHEKHAIWYAT HAPGVQDVYSFLRVVKE >gi|257442819|gb|ACYG01000019.1| GENE 96 113850 - 114062 62 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRALRLNLARRLALNLALLKRNALKFCSLEPPLIWSLFKHGVLFIGTPVLLFGERLRRKF YLRNYRLRRL >gi|257442819|gb|ACYG01000019.1| GENE 97 114203 - 114871 952 222 aa, chain + ## HITS:1 COG:Cj1286c KEGG:ns NR:ns ## COG: Cj1286c COG0035 # Protein_GI_number: 15792609 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Campylobacter jejuni # 15 222 1 208 208 296 67.0 2e-80 MSQSQKCTYQTACELSNVRLIKHPLIEHKLTILRDRETDPFQFRMLVDEISYLMMFEATR DLALREVSVHTPVAQTSAYKLATKIMICPILRAALGMLDSVFKLIPDASVGFLGFQRDEK TAQAEFFYAKLPADAAERTAIIIDPMFATGGTAIDAVKFLLKNGVKKIKFISIIAAPEGL HRFSEIYPQVEVFTAAIDERLNEQKYIVPGLGDAGDRVFNTM >gi|257442819|gb|ACYG01000019.1| GENE 98 115564 - 117618 1898 684 aa, chain - ## HITS:1 COG:Cj0777 KEGG:ns NR:ns ## COG: Cj0777 COG0210 # Protein_GI_number: 15792115 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Campylobacter jejuni # 13 684 3 670 676 759 58.0 0 MAPFCKGIILDALAKLNTEQYAAATAPAGHNLVIASAGTGKTSTIVARIAHLLNLGTSPR KILLLTFTNKAASEMIARLQRHFDKKITSAIVAGTFHAVSYALLRELGKGVILKQPAELK TLLKSLVERRKFYHVSDTRPYGGAYLYDVYSLYQNKEMSADFATWFSKNYEDQAEFAEIY ADILREFEEEKAKFNYADFNDVLLKMRRELQKGAPLRFDEILVDEYQDTNSLQGSLIDAF ATKSLFCVGDFDQSIYAFNGANIDIIGSFGKRFADAKIYALNINYRSSSAILALANRVIA NNPRLYEKKLIVGREGKFSAPRLHVYDDTAAQYAHVAAQIAQSGVPREKIAVIFRNNSSA DGVEVALKELGIGAKRKGGVSFFESREIKVFTDIFAMIINPKDMMAFMSTCEYARGVGSA LSKELFDALIALGHGSIHAGLLRPDESVKIFEKKRKNYQLGLFDDVDIIGSVSRFEALEF DEFFRSHPVLKHNKITEGGAVFLHEIYKIFKKSGSATRSATLISQIKNSCLFSLVADFIA TKRATLKNGKIDDERKKDEISRIYDKCGILEQIAGKYADPQSFYNFITLGAKEMSEGEGV NLLSVHASKGLEFCSVYLIDLAQNRFPNLKLMAMGGSLEEERRLFYVAVTRARDELVLSY AKFDKIRKVSYEPSCFLREAGLVK >gi|257442819|gb|ACYG01000019.1| GENE 99 117660 - 121217 2864 1185 aa, chain + ## HITS:1 COG:RC0249 KEGG:ns NR:ns ## COG: RC0249 COG4953 # Protein_GI_number: 15892172 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Rickettsia conorii # 607 970 263 660 796 163 29.0 2e-39 MKFLKFMLKIALFCAFAFALFLILDALYPLNLDMLNKQKSRILYDRNGEILNMQISDDQI WRFYAAADEIPPRLKQSAIYFEDRYFYYHFGVNPASILRAATYNFTQNFTKKSEGNVERV GASTITMQVARMMRPKQRSYKNKIIEIFNAFQLEWHFSKDEILGMYFNLAPYGGNIEGVK TAAYFYFKKDLRELSNAQIALLSVIPKNPNKNRLDRRSNINALKNRLISQLREGGVISQS EYERALAEPFSPRRYAAPNYVPHYALLAFNNYKMQNFTVKDDVNFTQNLEQVGAPGGAAG QASSSAHRAAAVELNFSDAAGAESNFTAAAKVGANLSSAANAQAEVDLKEMNPKEADFKT NAPKSLNLGGTSLNLNEREVAESQASAKPNEPKSVKSNEREGANLDERQDSINAARPSQN SQSLNLNEQRGAARLPQNPQADTDSDKGQTEYPPQNPNADINLNKRQNVVSIAHPHQDPQ NSQDLNLNEQRGAERLPQNFQADASSGERLHVNFSAQTNSASGTRTQTDSTSNAKMQTAS AASAESRANPAPNVKVPQNFALATQAQINSDPNAKTQENSANSKGGAQPKEQTARAQELA RLSEGKIYSSLDLKTQIALEGFLKSEILSLRDKGVRNGAAVLIDNESMSVIAYIGSHDFS ANEGQNDGVRSQKNVGSTLKPFIYAKALQHGLITPSKKLIDAPIIFAGYVPRNYNQSFMG AVSATDALSLSLNIPAVKLNLMLEDDGLYEMLSGVHLAEFSKDYYGAGIALGSISMSLMD LTRLYSAFANGGKLRKLEIAGVKIGDDAQILTPQSTYIVTQMLRNAPRSYLGSVWQNTLN APPLMFKTGTSADARDLYTVALTPKFTLGVWLGNFDGSKTRDLSGGVSAAKVAFNMFAFL DKSGMLGEVEFARPAGVSLRRVCTDAYREKECAQSADDLTIDGVEPNEECEIYGTSELFY LLKQGLIDLQKVRAGRCAAKFVAVKPVLNDINAKTYETGADGTLRLKVQCTAVFGERVYI RLSGGSREFIALNFTAFTRENSADLDSKHFSAAQQDNLTPQNLKSQNLTKQNSAGWNFIA KNPAIQNLASQNSILQNFTEQNSEAENFTAKNFTDRNSSQQNSAARDFTTLSLAPANSKV KTGEYFARTNGEAFTLNLGAGDFELGCLDENANFAKANFRVNERK >gi|257442819|gb|ACYG01000019.1| GENE 100 121265 - 126433 4880 1722 aa, chain + ## HITS:1 COG:PM0659 KEGG:ns NR:ns ## COG: PM0659 COG2373 # Protein_GI_number: 15602524 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Pasteurella multocida # 438 1722 549 1905 1905 172 21.0 5e-42 MKTKLLSAALFCALASFAAGVEIKYASGAYEISGVDGSGFSVTQKQILKCTPKITGTYES VSESSIRLYPKPMLSAGVNYSCEARGVRFEFETEPFSTEHIALLRPGLVAIKFNDTVSKD ALQQATRIYRAQNLAQNDISYELSSHDDRNFLFSFDPKAQNVVLQIESLTSKAGAKLQNP VELRTDEEPFNDSINASNLSGVQIRPAALKDGSLAARVCFPNYMDELSAKYIRIAGVSKF SLTQPRYYYYDEDEEGGESDDPSCYYYADIVSDEFMPNKSYDIRLLKGFGDSSYILRDEI KQSVKMGDRLPFVAFSDEKNFIPKSASLAFKSSNVNEVKISIAKVPEQNFRYFLNFESNE DSVGGLASEIAVKSFDIGGAKNAVAEHKIAMDFKGYEDGIYKITAFYKVGEKMQEVSRVA YLSDITAQVVLLERGALIYTSRLSNGEELSRAKVKIYSDKNELIVEDKTDGDGILRLENM EILAKNPRSIEISKGGEHAFVLFNNAVASVEKTITAKRPFVYLASELISPNERLLGTIVM KNRDFSSLKNTPIKFKIYDPSGTVIITRAQNTDEFGSVKIDELMGEKSGTYRLDLIYEDK IIASKSFSVENFVPNRIKNEILTAKDEYGADEIITLKLSSNYLAGAPAGDLKGSLEANAY EKELKIKGYEGFSFLNDRLKKKGATQLRRAEFTLSSAGKKELALSPAAADLNVSNAINIL LNFSVTEEGKNVNAYRSLSYLPYDRIVGIRANKDFISSGDSVKFGFALLDSKTKTDVKGK IDVEIYRDDFTYVYDGNRYVEQESFNLVSAVSTDAREFEYKFQNGGNYLIVANDYSSGAS AGVRVDVSGWGYYGRVNAKDVQSAKIKLASDKVKAGDKIKGVINSPVESGVLNISLVGEQ VYDYKILSVKGGSAEFELSVPENFVGGHINAVIARAATPAAMPLRAYANVPVALDASSHK AGVQILAEKSYKNGQNAQISVKSEPNSKVILYAVDLGILDIVSQEELDAFKAFDVSAYFA LRYFDIYDDLSVYQTTAKELSFGGDGVMAKAKRNLSPVENKKQKKFIKMLIAKADANGEA KFELAMPKNFNSTIRLSAMAIGEAATIGSANVEAKVRDDVVIKPADLTYMVRGDEISVPL TLINTTDKEQKAVLKISSSPSVAISGGEANFTLKPLEVKHTNFTASALDIADANIKFDLD ANGQKFSNDVEFDIISQFPRSKLFHVSYGDKPVTLKVDPSYKEIYTHISATPNAFSLADE LYLYPYGCTEQLASRMIAVDYVARKDSNKTLTNRVNEYASRILSRLKPNGDFGYWSAHGV TNYYASIYASDVLLELDTRYKFLSNKQRSLIFSALKSSYKDQDTLRIYADFVLDQYGKLD DDEINFVYDNDLYKDSPMASIALAAILKKHNMTTEFEFMLEKIDEANYDYADNGAGLTFA SDVRDAAFKLYAFGKVGIKDDSTARTVDAIIRDLKNINNTQERASVIRGFDAYFKDAKKE AHFALKYDGEAKNFNSPLDTKLAVKDGAIEFTPMIGNGELFFTALGFGYESAPLKHEALS IQSLNAHSMDSKRIEIYREFIDARGNVVDLNKLKVGQKIYSKISWRANYYLYNFVIDEAM PSCFEAVNERLGSAAQARVEGMQDSVALEHTEYLYDRVLRFPKSGYFYYDPRDGENSSGV IYTPINVIMAGSCALPAISIEDMQYEQVNNYDLQTLKFKVAR >gi|257442819|gb|ACYG01000019.1| GENE 101 126703 - 128253 2068 516 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 26 512 25 474 484 181 32.0 4e-45 MQDVSRRSFLKISAVGAGALALGASSATAAQNAKDVKFDEEYDIVIIGTGFAGLAAAIKA SGRGKKVLVLEKMGRAGGNSVINGGNMAAPMNKFQVAQGIKDSKELFIADAVKDGLGLNH TDLLGVMFDRSNDAVDLLTSCGAEFSDKLIFESGHSVARSLQSTNGSGSGYIQPMMGKLQ NDPNVTIKTRTKFDDFIVDDSGRVVGVEAREEYKFDPKLFSDDLENKSGEKKSYKAKDGV LLASGGYGRDLWYRQIQDPRVVPSIDSTNHPGSSAGAMLAANRIGAFTLLTSWIQFLPYC SPDEKGFGAAVNFTNHCCNTYGLTVDPKTGKRFMDEHAGRKIKADACFKVIAESEKNDNY PVNVCDSQAVAARNPVYTSRPLEAGVVKKFNTLEELAKAYNLPLEPFLKTVADYNSYVKA GKDPEFGKVVDKLDGIDVSKPPFYASRTMPKVHHTMGGLEINTKAQVISSLTHEPIPGLW AAGEVTGGVHGASRLGTYAILDCMVFGMIAGETIGA >gi|257442819|gb|ACYG01000019.1| GENE 102 128706 - 130250 1661 514 aa, chain + ## HITS:1 COG:lin0374 KEGG:ns NR:ns ## COG: lin0374 COG1053 # Protein_GI_number: 16799451 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Listeria innocua # 23 512 45 497 506 177 30.0 4e-44 MQEISRRNFIKIGAAGALALAASSASATQNAKDVKFDEEYDVVVIGSGFAGSMATLQALK RGKKVLMIEKMGRAGGNSVINAGNMAVPNNEFQKAAGITDSKEAFIADCLKDGLNLNHID LLGVIYDRAGDAFEYLKSIGVEFSGKVISASGHSLKRAVQAKNASGSGYIQPMHKAIEEN ANAVIKKRTKFDDFVVDDSGRVVGVKCREEYKFDPQLASDDRENKSGEVKFFKAKDGVIL AAGGYSSDKWFRAQQVPYLKDNIETVSQPGATAGTLIAAMKLGANPLQLSWIQLNPYTNP SEKGFGTSALFSNHCANDYGLTVDPKTGKRFMNEHAGRKIKTEAIFKCMAESENNDNYPV NICDQAAVDANNPVYTSKGVEAGSIKKFNTLEELAKFYKIPLEPFLKTIADFNGYVKAGS DPEFGKPLTKADVSGIDVSKAPFYACQTSPKILYCMGGVQINTKAQVIDAASGEPIAGLY AAGEITGGVHGASRLGTMSMADCMVFGMVAAENI >gi|257442819|gb|ACYG01000019.1| GENE 103 130404 - 131165 569 253 aa, chain + ## HITS:1 COG:CAC2657 KEGG:ns NR:ns ## COG: CAC2657 COG1145 # Protein_GI_number: 15895915 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 3 235 5 238 249 73 25.0 4e-13 MIAIYFSATGNTKHCASRLIAHLGGVCVSIESEACGELLKHHNDVILAYPVYFSDLPRIV RDFLYRNGASFSGKNVFILATMEIFSGDGAGCAARVLKQFGANITGGAHIKMPAFILDVA IFGYSQAKNERIIKEADAKVRRVAEALGANRPPQEGLGALCRIAGFLGQRLWMKIWDKSP FAKRKPSLDPSRCSGCGACVKPCPMQNIKLACKKAQFGDECTLCYRCVNICERRAITILG RAKNLGNSIPADL >gi|257442819|gb|ACYG01000019.1| GENE 104 132035 - 133756 1314 573 aa, chain - ## HITS:1 COG:FN0586 KEGG:ns NR:ns ## COG: FN0586 COG0642 # Protein_GI_number: 19703921 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 143 570 13 443 445 295 36.0 2e-79 MSWQNSKIWIKISAIAKQIFVTTALFILKFVRNFKQNFTHNFACLKKSHKKNPTQNIELN RALNSTQSRASNFKRNSTQNPASNSAPNFSATSATPDLAQNSNSVLAQNQGQNFVSKIAI RNLTQALVLAFSTAKENFSSRALPISLRVTLYYSVFILALAGAIIGICGYILDEVSGSSV SQKKLAHLVQKAAREGKFKSFDDGVFFYEHDGQSGVIAGFVPKGFDPALPLSRQGAREVE LDDDEFFYYDAQIKGRSAWIRGVIAVSEFELAMKRVMLIALILSPLFVVLVIYGGYAIIK RAFKPVRTMSRTASEIGASGDFTRRIELPRGKDELSALAATFNEMLASLQSAFERERQLS ADISHELRTPAAVILAQSDYALAYEQDASEAKESFAVINNQARKISALIEQILELARLQR GVCLAPVSLNKIASECAQDFQLLCAQKGLSFSSQIAEGVRVNGDELLLTRLINNLLSNAL KFTRSSVVLELCASADACELSISDDGEGIEPALQTKIWDKLYQIERSRNREQNSGAGLGL AIASQIAKIHNAQILLRSEVERGSKFSVKFKKV >gi|257442819|gb|ACYG01000019.1| GENE 105 133740 - 134402 626 220 aa, chain - ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 1 220 1 222 224 235 58.0 4e-62 MKILLVEDEKDLNQIIAKCLKKDGYSVDCAFCGKEALEFLDVAKYDAIVLDAMMPVMDGF EFLKAARARGLGTPVLFLTARDAKEDIIAGLDLGADDYMVKPFDFRELLARLRAIIRRKN ATADNEIIIRQVRLNLSKKSVVCAGEVVELTGKEYRILELLMLNRGAILSREQIGESIWD FSDEASSNVIDVLIKNIRKKLGEHGDIIETKRGLGYVVAK >gi|257442819|gb|ACYG01000019.1| GENE 106 134534 - 135172 407 212 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459561|ref|ZP_05624670.1| ## NR: gi|257459561|ref|ZP_05624670.1| hypothetical protein CAMGR0001_0875 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0875 [Campylobacter gracilis RM3268] # 1 212 1 212 212 282 100.0 1e-74 MKNQSLKGGADNSAQTSEALDTRDFSINENVDAIIYDAQNAGAAKNLDENAQDFSVNLAS ETSERNLASCEQNSKDFSSVECCEKQKNFVDAKDCEGERNSSQTQDLSSAQNFASEQNFA DTQNFSDTSNLASARDSASAASCAEACNSCKPVLCSRCKREIAKQNFKLGCVGFGLFALN IAAGALNFLGRLGSVADKKANEIRARQKASAN >gi|257442819|gb|ACYG01000019.1| GENE 107 135186 - 135689 623 167 aa, chain - ## HITS:1 COG:FN2085 KEGG:ns NR:ns ## COG: FN2085 COG3212 # Protein_GI_number: 19705375 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 30 167 23 159 161 66 32.0 2e-11 MKNLKALGALATTFALAGALNAGSFSEKDAKVSFDQAIGIAQQNFGDATIKSVEIDDEHG RLVYEIESYKEGSESEIKIDAQSGEILKTQTQKKLKPSKIDYSQVKISAADARAKALSAN AGWDFREVDLESNGGKPAYEVKLRQGMSKKEVLIDAATGVQILQCQK >gi|257442819|gb|ACYG01000019.1| GENE 108 135896 - 137200 884 434 aa, chain + ## HITS:1 COG:PA1972 KEGG:ns NR:ns ## COG: PA1972 COG2194 # Protein_GI_number: 15597168 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 13 434 12 434 567 316 41.0 5e-86 MPSFFKNPSQQKLIFLSSLAFVAFFNFSFFKNIINAYGISGLNFIYLVCDVAALIAFLTL FFTIFSSRYTTKPILMICFFISSFTAYFMDSYNVVIDSEMIRNAAQTNFAESADLFSLRL AIYVLVLGVLPCVLIARSRVSYRPLKFEILAKLKTAGICIIIIAALLFGFSKYYASFFRE HKILRSYANPGYWIYSGVKFVAKSKKQGSQPLMQIATDAHIDKNSTSPKKLVVVVVGEAA RADRFSLNGYERDTNPLLAKEQGVVSLSNTHSCGTSTAQSVPCMFSLLNRDEFSVEKAAE EQNVLDILNRADDMAILWRDNNSDSKGVALRVKYQDFKIPQNNPICDVECRDEGMLAGLD KFVAENAGKDVLIVLHQMGNHGPAYFKRYKKEFEKFSPVCRDNELENCSQQEISNAYDNA ILYTDYFLSRVINF >gi|257442819|gb|ACYG01000019.1| GENE 109 137230 - 137511 331 93 aa, chain + ## HITS:1 COG:SMb21211 KEGG:ns NR:ns ## COG: SMb21211 COG2194 # Protein_GI_number: 16264625 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Sinorhizobium meliloti # 1 86 458 544 588 102 54.0 2e-22 MIYMSDHGESLGEGGVYLHGMPYLFAPEAQKHIGAIVWLGEGKMRERYDLSALKSHKDDA FSHDNLFHTLLGIFEVDTKVYNKDLDILNGVKN >gi|257442819|gb|ACYG01000019.1| GENE 110 137717 - 138622 816 301 aa, chain - ## HITS:1 COG:CAC3361 KEGG:ns NR:ns ## COG: CAC3361 COG0583 # Protein_GI_number: 15896604 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 297 1 291 312 135 30.0 7e-32 MNLHRMELVLKVAEFRSFTKAAEALKIPQPSLSQSILSLERELGTQLFNRTSNPISLTRA GKIYASKAKVIFDAINDLKSDISEISGVKNDKIRIGFSQNGYNLLPSLLPMFCKKFKDSD LQITQFSSALSIREMLLQGDLDVGMLILPIDMSGLDGVKILTQKTYVALSSTHPLSLEFK NESVPKIDISRLKEERFILPNQSLRSAEQIDAFFAAAGFAPKVLCRTETFDIANAIVASG AGACFSIPQMIKEDKASRIKLFDVGARELDNTLIIAYKKGKRLNHLAQAFIKTARKISNE I >gi|257442819|gb|ACYG01000019.1| GENE 111 138764 - 140644 2051 626 aa, chain + ## HITS:1 COG:Cj0437 KEGG:ns NR:ns ## COG: Cj0437 COG1053 # Protein_GI_number: 15791804 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Campylobacter jejuni # 6 626 4 611 611 937 76.0 0 MSESNFNRRDFLKSACISVGALSLSGCVDTDKSKSADGGNEGGLPSVDVLVIGSGGAGLR AAVAVRKSNPNLSVVVATKMMPSRNATCMAEGGINGVTSFSGGDSYKLHAYDTVKGGAYL VDQDAAIKFCELAGPTIAEMDYIGTLFSRNASGGVDGKESGVPGGVAQRFMGGASKKRCN YSADKTGHILMHACFDDAVSNGVKFLIDHELLEISAPEGKCEGVVLRNIQTGDFYPVLCK ALVIATGGYTRMFYNRTSVPYIATGDGIAAALRAGLGFSDPEMVQFHPTGIKSGGALITE AARGEGGYLLNNKGERFMKNYHEKMELAPRDVVARAIETEIREGRGYGEGLGAYVLLDVR HLGKDKILKALPKIRHTAILFEGIDLIEEPIPIRPTAHYSMGGIEVTKFDDMSTKISGLY TAGEASCISIHGANRLGGNSLTDAVVTGKLAGLGAADYAAKQSGFGDGKRASELAQKWQA KFKQIANGSGKANEMYELREELGAQLWDNMGIFRTGEKLDLLSQNLEGIKARYDELHVAD ANPVMNTAFTDYVELGNLILLARCACLAAQKRLESRGAHTREDYPKRDDKNFLKHSIVTM NDAGELSLGYKEVVVTEFSLDGRKPQ >gi|257442819|gb|ACYG01000019.1| GENE 112 140641 - 141615 857 324 aa, chain + ## HITS:1 COG:Cj0438 KEGG:ns NR:ns ## COG: Cj0438 COG0479 # Protein_GI_number: 15791805 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Campylobacter jejuni # 1 317 1 317 321 481 71.0 1e-136 MKFIIDRFDGSKNYKQAYELSLEQIKGKTLLGVLQFIKQNLDITLNFTAACRMAICGACA VRVNGHSYLACDTKMEALLAEYENPDSFTISPLNNFRVISDLVVDWEPSIENLRKIKPTI TPKKEFSADKGCKQSPEQMERVKKQWDCILCGCCASECNKLGADASDYMQPFVFTHANRA AFDSRSKDAMPHLKPAVLNGLWLCVHCQECADRCPKGISAQSDITALRALAMKKGLTAGS GPGHAEAFLLDIVEGSGRLNEIKLALRSEGVFANMGKMDVAANLMAAGKMNPLHVFGGEE IEGHAGLVKMIETARKAQASGEIE >gi|257442819|gb|ACYG01000019.1| GENE 113 141626 - 142483 948 285 aa, chain + ## HITS:1 COG:Cj0439 KEGG:ns NR:ns ## COG: Cj0439 COG2048 # Protein_GI_number: 15791806 # Func_class: C Energy production and conversion # Function: Heterodisulfide reductase, subunit B # Organism: Campylobacter jejuni # 1 283 1 284 285 452 80.0 1e-127 MNNEFAFFPGCVLSQAAKESKISLEAIAPVLGIKLHEIKGWSCCGASQAQCVDPMASLVA NARNIALAEGMKMPLLTTCSTCMLTLTKAKLTLDKGAKSYINTFLKEGGMQYQGSTEITS LLWVLYQSLDTLKAKVVRPLTNLKVALFYGCHSLRPERELKKESSTNPKSFEAVVSALGA QIVPFEKRLDCCGFHASYPAVKSVSKMSSEIVNDAAEHGADVVVTPCPLCQMQLDIYQER YQEAMNSKARKPIIHLSQLVGLALGLSNEQLGLNINIQDATRLVS >gi|257442819|gb|ACYG01000019.1| GENE 114 142872 - 144017 1238 381 aa, chain + ## HITS:1 COG:Cj1267c KEGG:ns NR:ns ## COG: Cj1267c COG1740 # Protein_GI_number: 15792591 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Campylobacter jejuni # 1 379 1 378 379 627 75.0 1e-180 MVDLAQISARLDAVERLPRIKTEESIQERLKSKGFSRRDFMKWSGAMTAMLGLPAAFAPS VARAAELADRLPVIWLHMAECTGCSESLLRTDTPTIDSLIFDYISLEYHETIMAAAGWQA EENLEGAIEKYKGRYILMVEGGIPSGENEFFLTVGPEGKSGAQHCKHAAEGAAAIFAIGT CSSFGGIQAAAPNPTGAVGLEKIISKPVVNIPGCPPSEKNIVGNVLNFILFGTLPSLDVY NRPKWAYGLRIHDLCERRGHFDAGEFVESFGDAGAKDGYCLYKVGCKGPYTFNNCSRERF NSHTSWPVQAGHGCIGCSEPDFWDHMGPFEEPLADRLYESVFGGLGADATADKIGVGILA ITGVAVAAHAAIASFKKDKGE >gi|257442819|gb|ACYG01000019.1| GENE 115 144020 - 145741 1880 573 aa, chain + ## HITS:1 COG:Cj1266c KEGG:ns NR:ns ## COG: Cj1266c COG0374 # Protein_GI_number: 15792590 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Campylobacter jejuni # 1 569 1 568 571 921 75.0 0 MSQRIVIDPITRIEGHLRIEVVVDDENVVREAYSSSTLWRGLETIVKNRDPRDAGFFMQR ICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMANALFLHDHPVHFYQLHGLDFVDV VSALSADPKKASEEAFKYCDTPYACGADKLKEVQDRVGAFVKKGALGPFANAYFGHPTYK LSPEQNLIALSHYLECLRIQRTAAQMMAIFGAKQPHPQSLTVGGVTCVMDILSPARLGEY MSKFKEVADFVNRAYYPDLVMVAKAYGNEPSVLNDIGVANLWTHQEFQLSKNEWLFQSGM IMNGDISKVLELDENKITEEATHAWYKNDAALHPYDGEQEPNYTGLQDGQSIDAHGKEAH TKVLDTQGKYTWIKAPRYDGKPLQVGPLANIVVNYAKKNERVVKVVDQFLKDAGLPLEAV FSTLGRTACRMIEAKVVADNGLIALENLIANIKSGDTQTCAKYVIDNSKEYKGRYIGHVP RGALSHWCRIEKGVIKNWQAVVPSTWNATPKDKDGAMGAYESCLIGLKLADLSKPLEIIR RIHSFDPCIACAVHVMDAKGAELGCYRVDPSKG >gi|257442819|gb|ACYG01000019.1| GENE 116 145745 - 146419 903 224 aa, chain + ## HITS:1 COG:Cj1265c KEGG:ns NR:ns ## COG: Cj1265c COG1969 # Protein_GI_number: 15792589 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Campylobacter jejuni # 3 223 9 229 230 280 65.0 1e-75 MKKRFAEYEFSIGLRLTHWLRALCITILVITGYYIAFVFTAPEVSPEPVLFMQAKFRFVH LIFGFAMIGAAIFKTYLFFFDKKSRKELLSIKDFFSPRVWIAQIKYYIFLGEHPHLRGVY NPLQFISYLGFYLVLFVICLTGMILYVHVYHEGLGGALYGLLRPLEAAMGGLSEVRMIHH LCMNIIIIFVPIHVYMAVFNAVKGRDGAMDAIVSGYKFKKEEHA >gi|257442819|gb|ACYG01000019.1| GENE 117 146416 - 147294 744 292 aa, chain + ## HITS:1 COG:Cj1264c KEGG:ns NR:ns ## COG: Cj1264c COG0680 # Protein_GI_number: 15792588 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Campylobacter jejuni # 147 280 39 172 178 168 59.0 9e-42 MRVLVLGIGNVIYADEGIGVHFVRALAQNYKFYPKAAARNSMASEDFAAQNFMQNSAQVS AIQNSTSQNSIERNSLQNFADENSIFKQNFATANLDRNSTSENSAKQNFASNSTSQNSAI NSAAQSSINANLVAKNLAVPSDSADQISFIDGGTLASFLMPTMAEFDEILLVDCINADGA KGGEVYFFDYNAMPKQISWSGSAHEVEMLQTLQMMDLCGDLPHVKILAVVPQRIEEASFK LSSVILESSKIMEKTALKYLSDLGFAHEKIADLSAQDIADRFAKRGRDDSSI >gi|257442819|gb|ACYG01000019.1| GENE 118 147278 - 148915 1481 545 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0865 NR:ns ## KEGG: CHAB381_0865 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 543 1 509 510 326 39.0 2e-87 MIVAYEFNYLNENALIAHFLLFYARKSVLEFCLKKEVSLISLFVRGGEDEILKFSDEAMP LIPNSIFLAKSSVRVVDEGGAEAKALKFNCTFKDASSSDLNKFFEDEISNAASQAKFNNF TPRVMKEYLAHAELSQNEFGIISGASVLYEGKFEAVCRENFAGLLEFCRINLFHAQQVQI KRGDAIFTLKADVDFSADFLIAAGVSALDGIFVSDEKSKIALAAFEKPLISLKTNAIFRK NHESAPKFFDVKLAGGIFVFALVRALASDGIYFLSAKCENAAQKDKIFKVAPLQNGFLIV QNEDFLSDSASSYLKNSNDKNSALFALTCREKGIFNDSKKRVLRCFLGVGADDEIAIYGE SSKKILLKFNLPRSFDELKAQICADETGAKLLENFSSKFNVNAAKIDEILKSANAGFHTI FSIAAQLIWGRDAAFLIASAEDFAGGKGVRLDFCTDERGCVQADKILRSAMSYALAGANE KLFAFGFFDSLGYFLSDLADERKEDFDVLIFGGAMFSGRKFADLMLKLCKNFDASFSDSF ALQAR >gi|257442819|gb|ACYG01000019.1| GENE 119 148927 - 149190 77 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459577|ref|ZP_05624686.1| ## NR: gi|257459577|ref|ZP_05624686.1| hypothetical protein CAMGR0001_0891 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0891 [Campylobacter gracilis RM3268] # 1 87 1 87 87 146 100.0 5e-34 MLIFSKASKLYSRNSKSSWHCGADSCAIRAKLSANETSKNLKKAAKGAGVKDRILLNLEH ILHRPVRFIRPLRAQLACKTAPAARNL >gi|257442819|gb|ACYG01000019.1| GENE 120 149201 - 153649 3576 1482 aa, chain + ## HITS:1 COG:Cj0622 KEGG:ns NR:ns ## COG: Cj0622 COG0068 # Protein_GI_number: 15791982 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Campylobacter jejuni # 244 490 49 292 729 262 50.0 4e-69 MKAAKFEVFGAVQGVGFRPFVYKLAVDLGLKGEVYNDGEGVKIIVCADIFGAQQNSVDKN FAPLNLDEPNSNEIQAQKVSLSAARSLNSAESDSNEAANSLRNFASSNLNESSFSSQNAP NSPNDLTGSSRDLLNDLVSLPDSDLTSLPHDLTSYSQAAASEKFLPNLFKTDLNKQGSIL PASSDQNFIVQNSSQQGGMSQNESSQYLQNTKRDLQDAKEDLQGAKGDLDGFKHDSQSAG QYLCEEEILKIFEQRLRSEAPPLCRIDKITRTDLNTQDFTQNFTDFKITQSKEGRKFNPI LPDFAICDQCKKEFYDPQNPRFHYPFINCTDCGPRLSIIAALPYDRVNTTMRAFEMCEFC RGEYTDPLTRRYHAEPISCPHCGPQLFLCGAGGEILSSGEEAIARTAELLWRGQIGAIKG MGGFHIVCDATNERAVRMLRTLKKRPSKPFAIMCRDAAQAGRAASLSAEEKALIDCNVKP IVILKKREFSWRTLTGFAADFGTQNLKAQGKNPISPRFAGEQEEAAQGRGSALQNLRNSA ALNFSTQGAENYTEQGELQSAQIFSKTAHRNFACDTLAANELERAYDRSDLQRAVKNLSS PQAVSEAQVTINELKSQFAANSRELRYVSPDSWHADEQNLQLSTKISDLQPAASEPVSQR SANISSLQYAADRANSRYGACEQDLQNAADKAALQCAVSELSSQQTINSQGSCSAQACVA DVRGAYSDNGDDFVRLPASFSAIFRAGMIFIAPSVAPNLNKIGIFLANTGVHLLLFEYFD RPIVATSANISGEPIIFSNEELRAKLGSVISFYLDNDREILTPSDDSIAFLPQFEARTLS PDLKMACNSSKISEPLPICAQTENSAQNSILTQNSATAQTLIAPQNFKENFADRRNFENS QRPSDTDTSCDVADFTSKNSRDSANSAPQKNQDDANSVAKAKPVCETKSACATGFANLKN VANPTSLVNFANAAKPTNTANLARYTNFSAEADALNRALFLRTSRGMNPKIFPSKFQLKG TFLALGAELKNEFAIYKDGQIFISPYIGDLKNVATNERFFALLDMFVRAYELKFDAVIAD LHPQFSHTRFFEQRGYPMIRYQHHFAHLVSNLAQNELLGSGKKYLGFCFDGTGYGTDGTI WGGEMMIFNEFGFNRVAKFDEIALIGGENAIKNIYKLALALIFKFNAKDAAREFLAKFNA SEVANLEKIAPRAIRSSSLGRLFDAFAAVICGLRTVSFDGEAGMRLENLYIDGCEQSYEF TLRKEGENFTQNAPQPALQQQSADDLAREAGQGGLNAQNRSGVKDGCTLQSDFKELADDT ASKNELGLAAQNIAEGSGKKNESSAANSINQASALNLINLESKNATDADQTPQNRACAPS FEGECYVIDYEEAFLQALSDEPRLAATKFINGLANFIAEFAEGFGLEVVLSGGVFQNATL LNLTCEKLRERGIKFHLNRAVPCNDSGIAYGQLAAYLSEISR >gi|257442819|gb|ACYG01000019.1| GENE 121 154241 - 154672 537 143 aa, chain + ## HITS:1 COG:jhp1257 KEGG:ns NR:ns ## COG: jhp1257 COG0864 # Protein_GI_number: 15612322 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Helicobacter pylori J99 # 5 138 6 141 148 109 41.0 2e-24 MKKEEKESAVRFSISLPTKLFEDLDEMVRAKQYLSRSEFIRDLIREKMVEGVLHGDGEDD CVGVLCIAYDHHQSDLIEQLVEIEHHANVTIVSTSHFHIDERHCFEEITMRDKISKIERL SAKIGALKGVKFSKLVKAVITEA >gi|257442819|gb|ACYG01000019.1| GENE 122 155412 - 156239 927 275 aa, chain + ## HITS:1 COG:aq_671 KEGG:ns NR:ns ## COG: aq_671 COG0378 # Protein_GI_number: 15606084 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Aquifex aeolicus # 1 271 1 244 259 287 55.0 1e-77 MCKDCGCSVGHTHETGAHSHEHLHTHADGTVHSHAHMHEAGIDHEHDAHDHVHANVAISD AKTIEVMSKILSANDEEAAHNRAHFDEDKILCLNLMSSPGSGKTTLLETTIKSGKFKIGV IEGDLETNRDADRIIKAGAQAHQISTGETCHLDAFMVHEGLHHIDTKNLDLVFIENVGNL VCPAAFDVGAHLNVVLLSVPEGSDKIAKYPVIFRRADCVVITKTALLPHFDFDMDEVVRE VHKLNPKADVIALDSKSGEGVEKWLKFLQYKKEFR >gi|257442819|gb|ACYG01000019.1| GENE 123 156239 - 156520 472 93 aa, chain + ## HITS:1 COG:Cj0624 KEGG:ns NR:ns ## COG: Cj0624 COG0298 # Protein_GI_number: 15791984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Campylobacter jejuni # 1 78 1 78 93 89 60.0 2e-18 MCLSIPSKIISIDENNFATVETLGVRRGVSLDLLPEPAAVGEYVLIHVGFAMEKIDTQRA KESIEIYEQIAKQMRAEEGSVYESIEPRAGAEN >gi|257442819|gb|ACYG01000019.1| GENE 124 156556 - 157653 1197 365 aa, chain + ## HITS:1 COG:Cj0625 KEGG:ns NR:ns ## COG: Cj0625 COG0409 # Protein_GI_number: 15791985 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Campylobacter jejuni # 1 361 1 361 363 510 64.0 1e-144 MDLIKDFRDKELILALSKLIISKSKKPLNIMEICGGHTHSIMKFGLPSLVGENIKFIHGP GCPVCVMPRSRIDEAIKLAAMPQSIFCTLADMLRVPGSRTSLQKLRSEGHDIRALYSPLD CIRIAQENPQKTVIFFAIGFETTTPMSAVLIDKALSLGLKNLFFHINHVTVPAPVRAILD DADVQIDAFLGPSHVSVITGAKAYESIARDYKKPIAVSGFEPLDIMAGVLNLVEQQNAGT YEVFNEYERVVKEDGNQKAQNLIDKYFEICDFPWRGLGEIPKSGMKLRPQYAALDARVQF DCSVQSAPESKACICGEILRGKKSPYDCKVFGKHCTPQNPIGSCMVSSEGACAAYYKYGD IKNAG >gi|257442819|gb|ACYG01000019.1| GENE 125 157838 - 159025 1215 395 aa, chain + ## HITS:1 COG:Cj0626 KEGG:ns NR:ns ## COG: Cj0626 COG0309 # Protein_GI_number: 15791986 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Campylobacter jejuni # 3 395 2 324 324 339 49.0 5e-93 MNETILLSHGGGGEEMNRLINEMIFAAFDNEILRANNDSAILNLDAGAGFDRTAPSSALN SAASFGGELAFSTDSFVVTPLFFNGGDIGKIAVCGTVNDLAMVGAKPLFLSCALIIEEGL SLSELRRILDSMASTARSCGVRVVCGDTKVVPRGKCDKIFINTSGIGRVLRPARVQNIKA GAKILLSGDIGRHGAVILAVRDEIALSSELQSDCKPLCAAVEELILQGVKIQAMRDATRG GLSAVLNEFASSSGLEFLVREEDIKISDEVVGVCELLGFEPYELANEGTFVAIVEDDAEA NRALEILREFDANAAIIGEVREVGHDKGEFKGSLAPKLGTWDESTGASDAGTVSENRAGQ FQTPHATKGRVILQNAYGSQRFLELPKGELLPRIC >gi|257442819|gb|ACYG01000019.1| GENE 126 159134 - 159691 580 185 aa, chain + ## HITS:1 COG:Cj0627 KEGG:ns NR:ns ## COG: Cj0627 COG0375 # Protein_GI_number: 15791987 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Campylobacter jejuni # 89 185 17 114 114 81 38.0 7e-16 MHELSIVADLVALCEKALNAEKAKKKGAAEQGGKNSCDIADTANENTNSANTNIGPKNTE NTGVADTNPNDKSGDFYKNLDAKPQASYDTFSSKSPQIRELHVKIGRLSGVEAHYLQNCY EVFRAGTVCENADLIIHTQEIVVKCKNCGFSGDLTQNDFFCPHCKSSEISVIDGEDMYLM RLVIE >gi|257442819|gb|ACYG01000019.1| GENE 127 160383 - 162455 2354 690 aa, chain + ## HITS:1 COG:all4026 KEGG:ns NR:ns ## COG: all4026 COG1629 # Protein_GI_number: 17231518 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Nostoc sp. PCC 7120 # 21 690 188 854 854 195 26.0 3e-49 MSAANPAIADEQTKQSINLGEVEVTANKISENLKDVPQSISVVSDTELQERDVKNVEELV KTMPNITGVGGMYEGISTRGLNPSIYTSSNPVTVYVGGVAQSNKDAAYIPVTNIDHVEVL RGPSSAIYGKDSIGGIINIVLKEPTNEWSGSVGAEYGSHKYMLGLFETSGALIDDKLFLG LNGSASKEDGWIINDLNGDKANDKKNYNFGLNLKIVPTDRFTIKIYGDLFHRQDNSLDEL FIPKSRFGNISKSEAKHINLETPARVKQTSSSGALDLKYEFDKFDATSATTFRRAKKDGL YDEDFGSKITYLDPDHYGLVTFLNSKNDTFSEELRFSSNDEQSFKWVGGLYYENEKQVFG PIGDQYGDGGGRTIVEDWPSVNRAQTASVFGQIIYQITSKFDATLGGRYQQIRKHTKVDY FSYELGRDPGAPAFSMDEKATFRTFLPKIALGYDITDELNIYAMYSKGYLAGGFNFYTTG GSREDNKFDAQTSDDYEIGVKGSYESFRFSTALFYMDIKGTHIFYTDPNNPNIYSTANAD KSKSMGVEFEGVAKASKELDINLAASLLKTKYGDYINKDGTNNKGNKIEKNPEYKLSLGA SYYAPMGIYTRLDGNMIGKTYFDAQNKLAQKSYFTADAKVGYLKDGFDVYFYVKNLTDKE YFSHIRDRASNVLVTYGKGRTLGVGVRYSF >gi|257442819|gb|ACYG01000019.1| GENE 128 162490 - 163236 856 248 aa, chain + ## HITS:1 COG:NMB1475 KEGG:ns NR:ns ## COG: NMB1475 COG5266 # Protein_GI_number: 15677329 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Neisseria meningitidis MC58 # 1 247 1 263 268 159 33.0 5e-39 MRKSLAVLAVLGAFSVAGAHDFWLAGQNDDKLRVQIGFGDGFATCEPIDKQRENNFEIPV VIDKNGKKIELKRTSENYKFEGEKQPEGVYIITGQYKPTFWTEDKSGKWHMGGTKDTIKD AKFCRRATMLAKGVINTQAGDLITKPVGERLELVPLENPVNFKANKPFKIKVLFEGKPLA NAAVEGAPDGFLEDMSAFYGMTDDKGEIEVMALKPGPWILKARNKLAFSDPKKCDEETII ASFAFEVK >gi|257442819|gb|ACYG01000019.1| GENE 129 163621 - 164388 391 255 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459592|ref|ZP_05624701.1| ## NR: gi|257459592|ref|ZP_05624701.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 255 1 255 255 407 100.0 1e-112 MNPKILSAIKFRGITSSVLAICTYLIIWACCEFWHDVEISKFLGVAAVIVAIIFASMIFK LSATKIISDISDSKVFRTYLITFIARVLWAIMVIAFLLYAINIASSETLNYFFHSHRESF VDTFYSVIRTTQNIGFSYQNEATLIAIWSNIFLVVIPALKTINYVVLILVYYKLGKAATN KIFYFCGGLYFMYWILLNIMNVFVNLPKISNVTAVCIILIAIFLSEILELIAWIRIKGIL GAELWNKNLWTTPIK >gi|257442819|gb|ACYG01000019.1| GENE 130 164661 - 165695 1482 344 aa, chain + ## HITS:1 COG:HI1472 KEGG:ns NR:ns ## COG: HI1472 COG0614 # Protein_GI_number: 16273376 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Haemophilus influenzae # 21 344 22 345 351 360 53.0 2e-99 MSKLHSFALALALCASSLFADRVVTDQLGRDVTLPDEVKRIVVLQHQSLNALNELNAMDK IVGVQESWEKSLGKNYIRLAPSLKDMPTPGDLKVINYEAVLKLKPDVVIVTNYIPQEYID KMTELKIPVVAVSFQRSDAADKSKLNPTFKDDEAAYTEGFYDGIELLGKVANREKEAAEL ISFVKTSQEQLKAKFSDFIVDKRPKIYMANPDLTTYGSGKYTGIMFMRAGAQNVAAESIK GYKQVSAEQILAWAPQMIFVQDRYPQVPAELKSNPQLANLSAVKEDKIYMMPEYAKAWGY PTAEAMALGEWWLAMKLYPEHFDEAEFDKKVEEFYQKFYRTSYK >gi|257442819|gb|ACYG01000019.1| GENE 131 165960 - 167006 1035 348 aa, chain + ## HITS:1 COG:PM1149 KEGG:ns NR:ns ## COG: PM1149 COG0614 # Protein_GI_number: 15603014 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Pasteurella multocida # 18 348 23 350 350 345 49.0 9e-95 MLKLHSILLGAALCASLAFADRTITDQLGRKVTIPDQVNRIVVLHHEALNVLNEINAQDK VVGILKSWEQRLGKEYNRLAPSFKNLPNPGDIKDVNYEALLSLKPDAVVVVNYFPKEYIA KMEELKIPVIGISFFSSAQEEKAKLNPTFKDERDSFAAYDEGFYEGVKILGELSNHEKDA AELIDFVKKSQADLNAKFSNFIVDKRPRVYMANPDLTTYGSGKYTGVMLARAGATNVAAA DIKGYKQVSPEQILAWNPQIILVQNRYPQVPAELKANPALKGLSAVKEDKIYLMPEFVKA WGHPTAEAMALGEEWLAMKLYPQNFKDADFDKKVEEFYEKFYRVKYQK >gi|257442819|gb|ACYG01000019.1| GENE 132 167006 - 167986 763 326 aa, chain + ## HITS:1 COG:PM1148 KEGG:ns NR:ns ## COG: PM1148 COG0609 # Protein_GI_number: 15603013 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 6 321 15 336 340 247 46.0 2e-65 MLNLILLLLWVVLALISLASGQFHIPLEEIFKILFSGGGDEAAKSVMMDVRIPRILLSSL CGGALAIAGLSLQAVFKNPLVGPHIVGVSTAAAFGGALCILLGLSGLWLAGFAFCFGLAA LFLLYLLAKFVARADIFSLILAGIVINGVFAALTSLVQYLADDEEVLPNIVFWLLGSFVS AGYDKVILMCAIALPASAVLIALRWRFNLLSLNDDDLRVLGVDVKFLRCTILALCTALIA VQVSVSGNIGWVGLVVPHATRLIAGSDHVKLMPACFIAGAIFMLAIDDLSRSLSSAEIPL GILSALIGSPIFALLLKRSAKNAKSN >gi|257442819|gb|ACYG01000019.1| GENE 133 167970 - 168734 194 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 4 218 278 509 563 79 26 2e-13 MQNLIEVKNAGFYYEAEKFCFRNLSFELASSQTLAILGLNGQGKSTLMSCMMGILQPKEG EIVRKAKFAFLPQSFNVAFDYSVLDIVLMGRVREISLFSKPGKKDIQICLDALDTLGVAH LQKRSFNALSGGQRQLVLFARALASGSDVLFLDEPASALDIKNQDRVLSLIANLRSNSDA SIVFTTHQPNHALAVADRTLILRNDLSYNYGASNEILTEAALSSLYGVQIKTTEFDVAGE QIPSITQIFSTQVR >gi|257442819|gb|ACYG01000019.1| GENE 134 169226 - 169819 505 197 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459601|ref|ZP_05624710.1| ## NR: gi|257459601|ref|ZP_05624710.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 197 1 197 197 298 100.0 1e-79 MQDLVSQARKEGMISTGIDLFLAAVPATLVALDIAKGDMLGLSGNKTATYIIGGIIFALL CVSVFFRLRALRKISMLSGIRAAALYRNCVIVCICVIAITSIFLSIPLSISHKHLAMILC ILIAFAGAIYIIVAWFCINFALARVSGVGIFETYVWLCVILFPLNALYHLILPIVLIITS IVHLLAWSKIKNISVKV >gi|257442819|gb|ACYG01000019.1| GENE 135 169928 - 170626 507 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459602|ref|ZP_05624711.1| ## NR: gi|257459602|ref|ZP_05624711.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 232 16 247 247 392 100.0 1e-107 MQFIVSQARKEGMISTGIDLFLAALPAVFIVVGYVSFSEPWRLDDEMINYIASGILIAFI CISAFFRLRALRKISMLSGIKAATLYRNCIIICVCFFALALVLNYLYPREPDADGGQSDN PFAAIFGLALFVGVIYIIVAWFRINFSLARVSGVSTFRTYVWLCVGLFVLNILCNAAIIA IAISSEPRTEQVSALAIAVVMLKLLLPFAALIITGIVHLLAWSKIEKISAEV >gi|257442819|gb|ACYG01000019.1| GENE 136 170725 - 171387 426 220 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459603|ref|ZP_05624712.1| ## NR: gi|257459603|ref|ZP_05624712.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 220 1 220 220 384 100.0 1e-105 MQDLVSQARKEGMISTGIDLFLAALPVVLMAIDFVFEGIPGYPYNIVIIGGIFIALICFS VIYRLRTLRKISAFSGIKAAALYRNCVIVFICLAVFSLFHPISSCREEMIRETIGETIWN LAVPAAAIYIIVAWLRINFSLARVSGVMIFRIYVWLCAFFFALNWLCGAGPFGLATSKPQ IGDTVAALVITSFKEFLPFVALIITSIVHLLAWSKIEKLA >gi|257442819|gb|ACYG01000019.1| GENE 137 171531 - 172349 798 272 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459605|ref|ZP_05624714.1| ## NR: gi|257459605|ref|ZP_05624714.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 272 1 272 272 484 100.0 1e-135 MKEISKQGLLCKAKFRGVLGAVILLGIGVSGTVGVSSIDEDAVAIFRVLALLATLAIFYD CFVCLEKALGARFVKTYRLIESIPIVAILCYCAMVVALKEGAMLGLLYTLLYVLSTCAAV IIWGVLNCRLATLSGVDLFKIYGIVVSVAWPCEAVLGALAKIGVILALPYLITASLVTAF SGIFLIIAWIKFNPTRLCGAENSSELDGAKLGADGEKLSIYSKFAAFKKSDADDAKKPAS KASADTANMPASAVSTDDTTAARRPGNPGFKF >gi|257442819|gb|ACYG01000019.1| GENE 138 172616 - 173707 1242 363 aa, chain - ## HITS:1 COG:ECs0870 KEGG:ns NR:ns ## COG: ECs0870 COG0842 # Protein_GI_number: 15830124 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 10 362 4 367 368 193 30.0 4e-49 MNALRKSLLRIRALIKKEFLAMFRDKGTRMVLIVPVLVQAIIFGYGANFTPEQVRYAILD DARDATSTALVQSIAATPMFKTELGCKDLTCLRRAVSEGEAIIGIYFGGDFASTHELLII ADSRNTTLANTVIGFVQAIAGEYNSQHFVNLISINPRYVFNENTITRYTIMTGMILGLSM IQVLMLSAFSVSREREEGSFDMMLMTPANPLEMLIGKAVPPVLIAIAQGLALFLICVFYF EIPFRGRFAHLFAIIAIFSACNVGIGLVISTVCKTSLQSVVSSFLFLLPCIMISGLITPA DAMPRWFYYIAHLDPMYYANNCMWRIYLEGASLGELWHLIVPLLLIGAGTLSFAASLFRN KLD >gi|257442819|gb|ACYG01000019.1| GENE 139 173747 - 174142 113 131 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFSNLEALTGGMEFKAKFKRTAGAGLNLCGASVNFKISNRLRGTDVNFKFLNPLREGAG VNFKSASLNLHGDKELEFKGFAACFCGSKRRFKRSAALNFKILNPRPTAACKPKRLAPRN FKNFIVCLFRA >gi|257442819|gb|ACYG01000019.1| GENE 140 174906 - 176534 1820 542 aa, chain - ## HITS:1 COG:STM0816 KEGG:ns NR:ns ## COG: STM0816 COG0842 # Protein_GI_number: 16764179 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 279 539 116 373 376 142 31.0 1e-33 MNFTFLKILVKKEFAQIAKDRSALVIAFLMPLILVMIYGYAMRMDIKPVKVGFVSDLGSK IERDLLGGFLGSKYLQTRVYTDLESARRDFRAHEIESILYFDPRFAAKFQNTLSGLGGAS GGINLNLSIDESSFAGGASDIQNISGGENVRPLEDGGAGTSTESRINASAGGASGENLHR NGPETGGNANSFGGGSGVDSGGSASDIGADQGSVNLIGGVGDTNAGFIDGASGIGNTGGG VNASPSANDVHSAGSATNNGGSLSNVGGSNGLGGASNSDKDGAEIFLIQNATQSQLALLS YVYVAGVIEQVLAQDYGFLNANLNAAAKPVRVNYRSWFNEANESTWYLVSAEYVGILGLI CLFMVAVVISREWDRGTIASLYNSNASALEIVTAKVGAYYFLALLGGAMTLVYGQVLLGI PIRGSVAMLLATLCVFVLEMTCLGMLISAICKNQFLAQEYAIVIGYLPVTLLSGMIFDLR GLPAAINFIGHLLPPTYAVESFRICFLSGGQSATLWVNLAIQALGAVLFFSLCVLSVKRG AR >gi|257442819|gb|ACYG01000019.1| GENE 141 176531 - 176752 58 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459610|ref|ZP_05624719.1| ## NR: gi|257459610|ref|ZP_05624719.1| hypothetical protein CAMGR0001_0924 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0924 [Campylobacter gracilis RM3268] # 1 73 200 272 272 106 100.0 6e-22 MSEMGAGSSSVPLKFQISVATLLQLKFGSAPNAIPRLKFQSAVVAVAALARSKFRGLLRA AQRRKIRAQGQGG >gi|257442819|gb|ACYG01000019.1| GENE 142 177336 - 179201 323 621 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 377 582 7 214 311 129 35 2e-28 MDLLNIVNLQKFYLREDRSKNVVFENFDLRIDDAPRLISLTGPDGAGKSTLLKLICGIIA PDCGEIKFAGFIPSGENKEFVRANGYMSQSLGLYEELSVWQNLNIFAGLKGLDLKGGAEY LRGLLRRVGLLSFKDYAVDSLSGGMKQKLGVACAIAARPRLLVLDEPTVGVDPLSRRELW AIVREYLDQSGAKCIFSTAYFDEAADADLTLILLGGKIIAQERAAKITAALRNRTFRICS EDYQSLARRLMFKTQRFLKNSPLIDICPRDGSVDLLSEEPISLRDLQGFLNASLSGSDEN GGGESTARENGGSENFKILNENEGIKFNENESAKFKLSPREASLEDAYIFLNKAEIGAAN FGYEKKSFDAAQTVIKVRDVSKKFGSFTAVENTSFEVKKGEIFGLLGPNGAGKTTTFRMI CALLGMSGGEISVMGEDLRYAKSAIRSRIGYVSQKFSLYKKLSCYQNLEYFGRSYGIGGM ALKRRIEELLSEFGLQRLRNETWQNLPFGAGRNLSMACALIHRPEILFLDEATSGADPLS RRLFWNRINALARTGVSVVVTTHFMEEAEYCDRFLIQDRGKILALGSPDEVCVQDGRRLS VQQAFINEVQKFRSEAGDEGF >gi|257442819|gb|ACYG01000019.1| GENE 143 179497 - 179958 -249 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459615|ref|ZP_05624724.1| ## NR: gi|257459615|ref|ZP_05624724.1| hypothetical protein CAMGR0001_0929 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0929 [Campylobacter gracilis RM3268] # 114 153 1 40 40 71 97.0 2e-11 MPARSALLTARAEYSARRPIRLERVHIASASRAANNAHERGGLQNMKRPASTRDKFASKR KRKRVFKHLATYERRALYLRYASCGEILSLPRLLGKISLPPAFRGKISPPPCLLAKFYLV SAFLSIVTTSATASFGVKFTVTRNLYLIEPLVS >gi|257442819|gb|ACYG01000019.1| GENE 144 180522 - 181487 932 321 aa, chain - ## HITS:1 COG:ybhG KEGG:ns NR:ns ## COG: ybhG COG0845 # Protein_GI_number: 16128763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 20 321 23 325 332 124 32.0 3e-28 MKRLLIFVVFALAALAAAIYFNLDRREEVAHKAYGIIDIRQSSLSFERSGRISALYRDEG DFVQAGDVLAALDTADLSYQRRIQIARCDGLKFSLQKLQSGFRSEEIEMAAANVSALQNA LQLATLTNERLKSLGKSNSASKQQIDEAFYSMKRTQAQLQSAQANLRQLQSGYRGEDVGA ARANLASCEENLKYLNYQIETQSVLKAPFSGQIRARLKELGDISIPSVGVFELSEVKNKR AKFYLSENQLRFLRAGQNVRIIAADGSSASAKVAYVSQTAMYTPRTVQTEELRADLVWEA RADFSDEDGSFRLGQPISVEF >gi|257442819|gb|ACYG01000019.1| GENE 145 182136 - 182618 739 160 aa, chain - ## HITS:1 COG:BU299 KEGG:ns NR:ns ## COG: BU299 COG0716 # Protein_GI_number: 15616909 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Buchnera sp. APS # 1 138 1 145 171 73 31.0 2e-13 MKKLLVYATKGGDTKVVSEYIASKLGFEIKEAKELNEEDLAGASAFIFAASTHGDGQIQA KFDDKLELLNKTDFEGRKVALIGVGNVERHGSDFCSGMSAFLPVLKKADLIGAWGAEGYK FKHSRAFINGKFVGLTIDFKGDEHWQARADKWIAAVGGEF >gi|257442819|gb|ACYG01000019.1| GENE 146 182831 - 183328 669 165 aa, chain + ## HITS:1 COG:no KEGG:Tola_2807 NR:ns ## KEGG: Tola_2807 # Name: not_defined # Def: 17 kDa surface antigen # Organism: T.auensis # Pathway: not_defined # 1 165 1 166 170 82 33.0 5e-15 MKNFTLCLIAAIALCGCATPQDRYGGDVYDASETNHMRQSDRIEIVDVLPAKINVERSEG NTGKILGGVAGGTTGAVIGHKLGKHSSSRRLAETVGLVGGAVVGAVAGDAIQNSQKTVQG SNIIYKLNGKEYSSVQADPPCRFKRGKALLIHTGSETRVQPNSGC >gi|257442819|gb|ACYG01000019.1| GENE 147 183558 - 184070 335 170 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459622|ref|ZP_05624731.1| ## NR: gi|257459622|ref|ZP_05624731.1| hypothetical protein CAMGR0001_0936 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0936 [Campylobacter gracilis RM3268] # 1 170 1 170 170 276 100.0 4e-73 MKKFYLKIWALALIAAFAAIPAAAAEGLDYLLKTKEEKDLAISCDSGNGKYSACTKLVEI LSKKCDGGDYESCGAAGMIFTDLGQYEFSSAPLIKACEANIMSYCSYLAINDILFTGNLE RAAKVFDKICKQGISEDKRLACSIRKEIEDCSKDAKCDPLMKAKEIIKGL >gi|257442819|gb|ACYG01000019.1| GENE 148 184073 - 184573 331 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459623|ref|ZP_05624732.1| ## NR: gi|257459623|ref|ZP_05624732.1| hypothetical protein CAMGR0001_0937 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0937 [Campylobacter gracilis RM3268] # 1 166 1 166 166 265 100.0 1e-69 MRKILSLALLLSMPLLAKNDIDIDISAAINDTNLKNLANKCDWSKGDYEACSILKDTLSA KCDEKNFESCGALGILLIYLRREEDATEALNKACDAELLNFCLNAGMHDLYYTGNIKRAF VNLKKVCDAAIEPSKKKLACKMSYGLEQCLNDDECNPVKKAKELLE >gi|257442819|gb|ACYG01000019.1| GENE 149 184790 - 185344 657 184 aa, chain - ## HITS:1 COG:jhp0539 KEGG:ns NR:ns ## COG: jhp0539 COG1014 # Protein_GI_number: 15611606 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Helicobacter pylori J99 # 3 183 4 184 184 227 63.0 9e-60 MNQLRFVGVGGQGVILAGEILAAAKIAHGGYGIKASTYTSQVRGGPTKVDIILSDEEILY PYASEGEIDFMLATAQSSYDAFKNGVKKGGVIVIEPNLVVPSDEDRINFKIYEIPIITIA KYEVGNVITQSVVALAIAVELSRCMDAGLVKEQMLRSVPEKTRALNEKAYDLGMKYAREV LEQI >gi|257442819|gb|ACYG01000019.1| GENE 150 185341 - 186186 924 281 aa, chain - ## HITS:1 COG:jhp0538 KEGG:ns NR:ns ## COG: jhp0538 COG1013 # Protein_GI_number: 15611605 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Helicobacter pylori J99 # 1 273 1 273 273 448 72.0 1e-126 MAFDYDKYLRTDKMPTLWCWGCGDGVILKAIIRAIDRIGWSMDDVCVVSGIGCSGRMSSY IDCNTVHTTHGRAIAYATGIKLANPGKHVIVVTGDGDGLAIGGNHTIHGCRRNIDLNHIL VNNFIYGLTNSQTSPTTPRGFWTVTAQYGNVDPSFDAAKLAIAAGATFVGRESVTNPEKI ERLLAKGFEHEGYSFFDIFSNCHVNLGRKNKMSEAVQMLKWLDSRTISKAKFDALSEDER VGLFPLGVLHEDNEHTEYTKAYQKVIDAAQSGEAINFEGLR >gi|257442819|gb|ACYG01000019.1| GENE 151 186187 - 187308 1135 373 aa, chain - ## HITS:1 COG:Cj0536 KEGG:ns NR:ns ## COG: Cj0536 COG0674 # Protein_GI_number: 15791897 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Campylobacter jejuni # 1 372 1 372 374 541 68.0 1e-153 MREVISTGNALIARAAIDCGCNFFGGYPITPSSEIAHEMSRLLPKVGGKFIQMEDEISGI SVALGASMSGAKAMTASSGPGISLKSEQIGLGFIAEIPLLIVNVMRGGPSTGLPTRVAQG DILQARNPTHGDFQSIALCPGSLKEAYTQTVRAFNLAERFMTPVFLLLDETLGHMQAKAV LPEISDLKIERRAEFKGSPKDYEPYDAAPDKPAVLNPFFRGYHYHITGLHHGGKGFPTEN EQIVDHSIKRLFNKISAHEDEIVQYEEFMLDDAEICIIAYGSVSLAAKDAILKLRGQGVR VGLFRPITLWPSPERKLRELGERFNKILIAELNLGQYLLEVQRACLRDDFKTLLKANGRP ISPSEIIEKVKEL >gi|257442819|gb|ACYG01000019.1| GENE 152 187308 - 187619 506 103 aa, chain - ## HITS:1 COG:Cj0535 KEGG:ns NR:ns ## COG: Cj0535 COG1146 # Protein_GI_number: 15791896 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Campylobacter jejuni # 10 99 11 101 103 108 59.0 2e-24 MSENESQRAIWTDESRCKACNICVSVCPSGAIAMRQDEGAVQGMMIDVVDEGACIGCREC ELHCPDFAIFVAPKGFKFARLSSQAREMAEKIKNNNFMKPKDA >gi|257442819|gb|ACYG01000019.1| GENE 153 188019 - 188900 988 293 aa, chain - ## HITS:1 COG:PAE2370 KEGG:ns NR:ns ## COG: PAE2370 COG0039 # Protein_GI_number: 18313295 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Pyrobaculum aerophilum # 3 228 2 230 309 153 38.0 4e-37 MKIAIFGAGNIGAAVANDLIVSDSLSQKIDSIALVDTVEQIARGKALDLAHAAAVYERDL RISGSTEPSDIADAGIVVITAGRARKAGQSREELFGSNAAIVAQCARDAAKYAPSSIIIV VTNPLDMMVYAALKASGFAKERVIGMAGELDGARLKFELARESGKEISSMRSAIVGPHSE EMIALKNELGFEISDEIFGRAVQNTKRAGAQIGELLGTSAYLAPAAGIVKIMKYILCDTC GTLACCVADRSGVPLGRFVSVGKMGAIERNFAYSGEFYEQLERMRERIAGLKF >gi|257442819|gb|ACYG01000019.1| GENE 154 189009 - 189959 1073 316 aa, chain - ## HITS:1 COG:Cj0529c KEGG:ns NR:ns ## COG: Cj0529c COG1559 # Protein_GI_number: 15791890 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Campylobacter jejuni # 20 316 35 331 333 267 46.0 2e-71 MKFFIKLIKAACVCIELAAIVLLAVGFDLHERVGNAKTVQIGQGSSTKILSELSKSYPKF SKFDARLLSFYGGAKTGELELSGENLPKYQFLYELSIAKPVMNEIKLIPGETTIVFLKQL AKDRGLSFSELEREYNATAPFYEGFLVPETYKIGKNESEKNIIDHLISSAQKFHEGLSHE LIGEYNATAWKQVLIKASVIQKEAANADEMPLVASVIDNRLAKNMRLQMDGTLNYGEFSH VKITPQRIRTDTSHYNTYLNDGLPKEPVCVVSRDAIRAALAPAKSEYLYFMRNKKTGLHD FARTQAEHERNVKAQR >gi|257442819|gb|ACYG01000019.1| GENE 155 190089 - 192677 3082 862 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1133 NR:ns ## KEGG: CHAB381_1133 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 855 23 855 856 533 39.0 1e-149 MYKFLARFFLTLTILFIICAVGLKHGIAISQLDVGFAKLEGFYLKLNKGLVLRIKNLEIT QNNTQNLEQNSTDLRTQSEKILEFSKKISLINSFFEEIDVQNLKIKGESLKLKYKSDVFY ADTRFFRLNSKITPSANGLNFDPIELELNDFNLTLHGTARANFRADTYDFNGTFASHEIA GELDVHNIGSELNIEINRASALSLKNFMNELGALTGLNPLANEWIYGKAVAQNYYIENLH AKVDLKDPRPIAENVSATAYAQDLTIKFQPQIEAVTVKDANITLKNDFLSFTLNEPKFKG KSLEGSGVRIGGLFEERPVVYLDLRTKESLGKDLVDILQSYGIDEPVYPLSGGIDARVLI DVDVEKESAKVDANVTLKDADLMISKAKFHSKAARVHITEKKIDIKDANLQNEIFNATAS SSIDIATRKAKFNGIIHSFNLSPNGKEILKFGDARDNISLDFSGKAPVLSSQFLGAKMSF GERIEISSPDISGILPFSKTLKNAGIGGGDLKILTSDFTNLDISSNNLIFDFGLLNKDGS HYKNDSFALRVRGGDLDGSSGSGKISLKINKGGNFVALKDVDVAINTSVQTSEFNSGTKE RSPINFSGQNSSIVLSDLNKTLKFTHFNGVLDGKNMNLNASFKRGDVKLIFKKSLLQIFA QNISGEALNQFLGSQSFDGGVFTLKASGIDPRNYRGEINVQNTYLKDYIIYQRLLSFINS VPSLLTFKTPDFNDRGFSVQKGKIYFRRSGDKIYINAMNFTGSSADIAGNGEVDMKSGAL NIDLELKYLKDASSIISKIPLLNHIILGENNTISTIIEIRGTTKKPTYSTAVATDVLKTP YNLIKNTLMLPFVIFGDNEESK >gi|257442819|gb|ACYG01000019.1| GENE 156 192674 - 193087 423 137 aa, chain + ## HITS:1 COG:Cj0863c KEGG:ns NR:ns ## COG: Cj0863c COG0582 # Protein_GI_number: 15792201 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Campylobacter jejuni # 1 130 1 130 354 135 56.0 2e-32 MKFPLDYKDSFEKSLLFWLVKFVRYKLSALSNKELKNDALFRRASLALNHEVANINELER LAKDARNAGLTGINTYFNPLKKFYEAIVEYNLESMRNIDEELLSEILASITGGLSDARQK KLPNRANKFFRLHRPTK >gi|257442819|gb|ACYG01000019.1| GENE 157 193020 - 193736 905 238 aa, chain + ## HITS:1 COG:Cj0863c KEGG:ns NR:ns ## COG: Cj0863c COG0582 # Protein_GI_number: 15792201 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Campylobacter jejuni # 4 238 119 353 354 306 67.0 2e-83 MRDKKNYRIALINFFGFIDRQNEQDGTSHNFGIELKHWGGVSGSRGTKLPEFMSEEELKR FLDAINLSEFRSFAHRNRLIVKIIVYTGIRVGEAINLKRKDIAPEGDLFVIRIRGKGNKY RIVMIKRHLIEEHLNALETNFANKEGYLFVTKNGAPLTQAYVSGIVEKILMSAGIRKEKN GAHMLRHTFATMLYKKQKDLVLVQEALGHASLNTSRIYTHFDSDKLRLAAKVAEEFEE >gi|257442819|gb|ACYG01000019.1| GENE 158 194540 - 195184 808 214 aa, chain - ## HITS:1 COG:Cj0012c KEGG:ns NR:ns ## COG: Cj0012c COG1592 # Protein_GI_number: 15791411 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Campylobacter jejuni # 1 213 1 214 215 290 73.0 2e-78 MRQYETYRCDKCGAEVEVQKVGGGALSCCGEPMKCITEDLTQVNLMKAFAGESQARNKYD LYGDLAKEAGFHAIARHFYEAAENEKWHARAELKAHHAAAGIPLDKMDKNLFDAAAGERY EHESMYPSFAKIATEEGKKEVARLFNAIGKVEEEHEREYNELQKILLEEGFFESFDEEVW VCEVCGHVHRGKKAPGACPLCKAPREYFKKQRLV >gi|257442819|gb|ACYG01000019.1| GENE 159 195595 - 196269 272 224 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0915 NR:ns ## KEGG: CHAB381_0915 # Name: not_defined # Def: phosphohistidine phosphatase SixA # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 98 1 97 159 85 45.0 2e-15 MKRIYFIRHAEAQSGGKSDFERALSRVGELCAIKLGEKLRSLGLAPDLIITSSAMRALHT AQIIANALGATKRVVPLRELYDISLWDLAKFVRSLDEKRFFGCGVNVEKYNAVGLSSEKH RDANAENSAFKGTKIPASIGENNAISCNNVEISSTDVMQNFNAASAECVFIVGHNPAIGG ICSLLGEKEVDKFPPCSICGLEFDVHKFSYITDHSGKIVMLQSF >gi|257442819|gb|ACYG01000019.1| GENE 160 196314 - 196871 637 185 aa, chain - ## HITS:1 COG:Cj1003c KEGG:ns NR:ns ## COG: Cj1003c COG0705 # Protein_GI_number: 15792330 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Campylobacter jejuni # 13 180 2 170 172 118 45.0 6e-27 MQSGKFTLAIIAVNILFFVISFALEYFFGFKSYLFFGLNPYFFEGMPWQLLSSFFMHGGV MHLAMNMAVLYQFGGILERAFGGIKFTLLYIVGGLLSGALCLIYIRYAMSMGEIVNIVGA SGAICVLLGVIAYFDERNAGGIFVAILIMSFAPMLMGVNVAWYAHIAGFVVGYGFGMIQK KFRIL >gi|257442819|gb|ACYG01000019.1| GENE 161 197629 - 198264 653 211 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0918 NR:ns ## KEGG: CHAB381_0918 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 51 209 61 219 221 175 54.0 9e-43 MKQLIICALGAFLLVGCSSKAPSAGSQQAYVLNDHEEGITSVPGSEFNRPLIASVDDYTG TRAGGDCSGFITVLNDKYDDLFFNSKDLPKYFTNGRKSQAIYNYYSRKNLLSNTPRVGDL VFFQNTLRSNKGKVNNEISHIGIVREIYADGRVKFVHNTRGRNQADFVNLNKKNVHVAGQ KMENSYIVRCGKDRISCLASNRFAGYGRVNN >gi|257442819|gb|ACYG01000019.1| GENE 162 198388 - 199656 1382 422 aa, chain + ## HITS:1 COG:Cj0858c KEGG:ns NR:ns ## COG: Cj0858c COG0766 # Protein_GI_number: 15792196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Campylobacter jejuni # 1 422 1 418 418 528 70.0 1e-149 MHYLRINGGKKLSGSVKISGAKNAALPLIALSILSKNEVVIKNLPAVSDIHTLIQLLSNL GAKYEFLDANTAKIDPRDVNSTKAIYDIVRKMRASILVLGPLLARFRHCEVSLPGGCAIG ARPIDLHLSALEKMGAEVKIEQGYVVCTAKKGLKGATINFDKITVTGTENIVMAAALASG TTHIINAAKEPEVIAVCNALKNAGIDIEGIGTNEILIKGSGSELLSLNEISIIPDRIEAG TYLCAGAITGSRIKITHARAAHLGAVLAKFEDMGFKFEISNGGDEITILPASKIKPVEII TSEYPGFPTDMQAQFMALACISSGVSTIDERLFENRFMHVSELSRMGADIRLNGHIATIS GGKLNGADVMATDLRASSALVLAALAARGESKIHRIYHLDRGYEKLEEKLSALGADIQRL EE >gi|257442819|gb|ACYG01000019.1| GENE 163 199893 - 201074 1035 393 aa, chain + ## HITS:1 COG:Cj0857c KEGG:ns NR:ns ## COG: Cj0857c COG0303 # Protein_GI_number: 15792195 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Campylobacter jejuni # 1 393 1 386 386 289 42.0 7e-78 MIGINEAIDLATARITSSKQSEKVPLPSALGRILFSDISAIKNLPCFDNSALDGYAYAAE FKDEELKIVEPTIFAGDEKFYEIKAGQAQKIMTGAPMPAGADSVARLEDVNAQGGTLKIP ASVHAHDGFRKKGEEVRAGELLLRRGEILNPAKIMLLAAQGIYEVDIYARPKIALFSSGN ELKEPWQSASEREIYNANSSGIAALLQKYGFKNEYLGILKDDFSEVCEALDAATRKFDVL ITSGGASAGEADFMQSAMSELGFLQVFDHIDIKPGRPSKCFAKDGKFVFAMAGNPMAAFV LTRAVILPILFKLSGASEAFSAEAAIYAKLASDLKLKSGRVNLTVGAYEGGVFTPMPSPS GRIRPLAAASHFFLADPECDKVRAGEIVKIYEI >gi|257442819|gb|ACYG01000019.1| GENE 164 201287 - 201841 414 184 aa, chain + ## HITS:1 COG:Cj0768c KEGG:ns NR:ns ## COG: Cj0768c COG0163 # Protein_GI_number: 15792106 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Campylobacter jejuni # 1 184 1 185 187 163 47.0 2e-40 MKILVCVSGASFCEIGFDLLKFLASSPHEIHAVLTQGARRVLRAENGIDADEALKSTEFK SVKFHLDDDLSAPPASGSFGIDATIFAPCSVGSLAKIYGGLCDSLSTRAAAVALKEHKRL VLGVREMPLSAISLRQMSELAALGVIIAPPVIAGYCGVQNLKNFIIGKWCDALGVQNELF KRWQ >gi|257442819|gb|ACYG01000019.1| GENE 165 201841 - 202317 345 158 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 3 157 2 156 164 137 43 5e-31 MQNSRKCIYPGTFDPITNGHLDVIKRALGLFDEVIVAVALNESKKPYFSLQSRLEMARAA TRGLRGVSVQSFDNLLVDFAKSCGVRFVIRGLRAVSDFEYELQIGYANASLWEEFESVYL MPTLKNAFISSSIVRSVLSHGGDVSHLVPSEILEFLKK >gi|257442819|gb|ACYG01000019.1| GENE 166 202390 - 203472 1086 360 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459647|ref|ZP_05624756.1| ## NR: gi|257459647|ref|ZP_05624756.1| hypothetical protein CAMGR0001_0963 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0963 [Campylobacter gracilis RM3268] # 1 360 1 360 360 719 100.0 0 MNKQMDEIERLRTFLKSVRYEYKALNKIAEAQAVSRRWASDEYINLEPFYFEYNRFFKGK ILKAKPKKIVNAYEYGFDAQDRVVFERQHDGKKHFFENLYFWGRDEVLKYEFGCYNKRCV GCFNIKRFIYEGGVLKSIYSAFDNNAYGIENFTYEGGKLAQRREYVEHPRAGRRNDVINY EFNAMGELSLITENGYVRYQKPDKDMSYKKLYELAAQRLLPAIKETIKKHAPACKLYCIN LACDNRSLPPIIGFGSQEQRAQWLARKDGWLLWLVPDYEFRAEVEVDYETAKIFDLFNQE TQLNDKYAQAKKLIWECVKQLKAGLGEFALDMTDDFTITATDCDLGNLRKDFIAINPELA >gi|257442819|gb|ACYG01000019.1| GENE 167 204315 - 204941 724 208 aa, chain + ## HITS:1 COG:Cj0766c KEGG:ns NR:ns ## COG: Cj0766c COG0125 # Protein_GI_number: 15792104 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Campylobacter jejuni # 1 206 1 191 192 151 44.0 1e-36 MYVIFEGIDGVGKSTQIARLAAAFPQAIVTKEPGGTKLGEAVRSLVLGEDFKWRRGSVNL REVCGEISKRAELLLFLADRAEHYERVIKGGAGGLVLSDRGFISGLAYALANDEGADISE LIALNKFALGGKFADKIVLFSADEQLIRHRLKTRASSDIIEARGLKYLMRVQDLMAQACA ACGVETLQIDAAQSEEVICDQIKNFILS >gi|257442819|gb|ACYG01000019.1| GENE 168 205258 - 205845 426 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459651|ref|ZP_05624760.1| ## NR: gi|257459651|ref|ZP_05624760.1| hypothetical protein CAMGR0001_0967 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0967 [Campylobacter gracilis RM3268] # 1 195 1 195 195 397 100.0 1e-109 MKTLKFVLRKIFKFIFLFWVVISSLFGTYMIADKFFGRTVVAWTLIRDFSSASLDLKDFS VSARLRATTIGGRLWRDERESKPDFSDDNSTGAPYELSINFDHVSAPGIVLNNIKLEQVQ SGRVVFEKDELEVPIEMGYSGYKSGGLEIPDLDSAHVKHRLSAEICVSGGTCTNFVHYFL PYKHVEGTAALRGIF >gi|257442819|gb|ACYG01000019.1| GENE 169 206117 - 206560 200 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459653|ref|ZP_05624762.1| ## NR: gi|257459653|ref|ZP_05624762.1| hypothetical protein CAMGR0001_0969 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0969 [Campylobacter gracilis RM3268] # 1 147 1 147 147 229 100.0 7e-59 MITFGLIFFVTAVFYAIYLASKKDAFPNLGDFFYTCAALALVAMIIMVYIYAAACAIKSR TPRLTQLVFNLAKRLLGLARLFWAVLIACAAAIAVLLWIYMTFIKDKTASLSDFFYSCVV LTPVCVICLVCSTCMQKLSSWRKRRKK >gi|257442819|gb|ACYG01000019.1| GENE 170 206656 - 206862 225 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459654|ref|ZP_05624763.1| ## NR: gi|257459654|ref|ZP_05624763.1| hypothetical protein CAMGR0001_0970 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0970 [Campylobacter gracilis RM3268] # 1 68 1 68 68 122 100.0 7e-27 MRNKQPYIEDRIENLRIRVLRQEIETLVLFEIDGVRFRMCCRAFSFKQGDLVRVKYCKQG YLGSLVAL >gi|257442819|gb|ACYG01000019.1| GENE 171 207929 - 209032 1725 367 aa, chain - ## HITS:1 COG:Cj0930 KEGG:ns NR:ns ## COG: Cj0930 COG0012 # Protein_GI_number: 15792259 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Campylobacter jejuni # 1 367 1 367 367 540 74.0 1e-153 MGLSVGIVGLPNVGKSTTFNALSGAQNAQAQNYPFCTIEPNKAVVPVPDARLGKLAQIVK PGRIVHSTIEFVDIAGLVRGASKGEGLGNKFLSNIRECEIILHIVRCFESGDITHVEGCV DPIRDIEIIETELILADIEQLGRKIERLGKEAKANQKGAKEALAVANELLAHLNDGKPAS NFALKEDESYIALNRELRLLSAKDVIYGANVDEDGIAQDNEYVARVREYANARGAEVIKL CAKIEEELIGLSDEETHEMLQSLGAQQSGLELIIKRSFAKLSLISYFTAGEMEVRAWTIT KGWKAPKAASVIHNDFERGFIRAEVIGFDDFIACGGESRAKEAGKMRLEGKDYVVQDGDV MHFRFNV >gi|257442819|gb|ACYG01000019.1| GENE 172 209033 - 210493 1680 486 aa, chain - ## HITS:1 COG:Cj0929 KEGG:ns NR:ns ## COG: Cj0929 COG0260 # Protein_GI_number: 15792258 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Campylobacter jejuni # 1 481 1 481 483 583 63.0 1e-166 MKVKLLDRKINEIEADFEVILVVDKNLNHEFIKDTDKFALFNYKGEGNLLLAESGRLYIG VKALEYDRVRTALASAYNALKGYAIKNFKIAFYKCGCDRRSTMAMVEGVLLGGYEFNKYK SDKKSSSLNEILISTQEYSGEQIDLQKANFGIEQGAITASAANFARDGVNEIPEIYTPEK MASEAEILASNYDDVSVKIYDEDFLREQNMNAFLAVNRSSAHPPRLIHLIYKPQRCLKRV VFVGKGLTYDSGGLSLKPADYMLTMKSDKSGALAAMGIIKGAAELELPFEIHAVIGATEN MIGGDSYKPDDVLLSRSGVSIEVRNTDAEGRLVLADCLSYAQDLEPDLLIDMATLTGACV VGLGEYTSGIMGNSEELKRKFKDLSGSSGELFSILEFNDYLRELIKSSIADVSNCASSRY GGAITAGLFLDKFIKDEYKGKWLHLDIAGPAYLEKAWGYYAAGATGAGVRASLYFLQALA KELKDA >gi|257442819|gb|ACYG01000019.1| GENE 173 210468 - 210974 529 168 aa, chain - ## HITS:1 COG:Cj0928 KEGG:ns NR:ns ## COG: Cj0928 COG0586 # Protein_GI_number: 15792257 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Campylobacter jejuni # 2 160 39 197 198 202 66.0 2e-52 MAHEGHINLPLGIFVAGLGAFCGDQFYFYIGRYNKKYISKKLAAQRRKFAIAHLLLQRYG WPIILMQRYMYGFRVIIPMSIGITRYSAKKFAIINLFSAWCWSGATMILAWYFGEEIWSG LRLIEQHWYFAIPIIGGILYLFFRLFKRMENHFMNSRKERDESKTARS >gi|257442819|gb|ACYG01000019.1| GENE 174 211088 - 211636 598 182 aa, chain - ## HITS:1 COG:Cj0927 KEGG:ns NR:ns ## COG: Cj0927 COG0503 # Protein_GI_number: 15792256 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Campylobacter jejuni # 1 181 1 181 182 225 59.0 4e-59 MKSLSNEQKSYLFRSIRTVRDFPKPGILFYDITTLVGDREAFNFLLDHLAERYADYGLDY IVGIESRGFIFAAALAARLRVAFVPIRKPKKLPYITISQKYSLEYGFDQVEMHVDAFSGV QDAKVLLIDDLIATGGTARAALDLIAQTQAKCVEACFLLNLRELNDLGEFSRRTNVYCVL EA >gi|257442819|gb|ACYG01000019.1| GENE 175 211633 - 211875 242 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459663|ref|ZP_05624772.1| ## NR: gi|257459663|ref|ZP_05624772.1| hypothetical protein CAMGR0001_0979 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0979 [Campylobacter gracilis RM3268] # 1 80 1 80 80 115 100.0 1e-24 MSVVLGVLALFFAALLILSIRKNSKIYALLRKSEERISKLKSDNEKLKTALRFGIEALQN EESENCSLKIQNARLKRGKL >gi|257442819|gb|ACYG01000019.1| GENE 176 211872 - 213245 1088 457 aa, chain - ## HITS:1 COG:Cj0925 KEGG:ns NR:ns ## COG: Cj0925 COG0698 # Protein_GI_number: 15792254 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Campylobacter jejuni # 159 239 61 141 145 108 61.0 2e-23 MQINKIFIASDHAGFRAKEQAKKALAALGYEAVDLGTHSAEVSVDYPDFAGTLADKILAE CEACARSRNFKENNDKNSAAAAENSEAGGSENFGASINGCGNFNDAVQCSEKNENFNVIK NASRQNFNASGSMTTCVNAAVSQNANKDKILNSTDYGIYGVLICGTGIGISIAANRHAHI RCALCHDATSARLAREHNDANVLAFGERLMGALVIEDMIRAFFGTDFAGGRHIKRVAKLG ACGSANCAHGFDGENFTQNSAQNFAEQSCSINLNGRNSKSSFGGKTLSCKNPIGTDSASN FARSFNDKNSLFTGENSLISFGGAHHINLNSAHAKIIFNEKNSLDKNSTSANSTLNFMRE SVCEKNFAQKASCKYFVSLNPAIINFKATNSVCMSVKPKNVNCASAGLTDANSDIASVNL KGANLSNAYFRSINSAYFNAAPATMRRFANPNEGGEQ >gi|257442819|gb|ACYG01000019.1| GENE 177 213255 - 214100 721 281 aa, chain - ## HITS:1 COG:Cj0856 KEGG:ns NR:ns ## COG: Cj0856 COG0681 # Protein_GI_number: 15792194 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Campylobacter jejuni # 1 280 1 275 282 330 58.0 2e-90 MKILSKIYHFLSSWTGTVIVVLFVILFVAQAFVIPSGSMRTTLLEGDFLFVKKFSYGIPT PHIPFVEWQVAPDSDGDGHIIRGEGPKRGDIVVFRYPLNEKMHFVKRNFAVGGDEVIFDL NNFYLRPHEGDEFIAANYDARDIVILGGEKYVKEPYKFKGIHYDTNARNSMLTNVKIALE KGELSMKPISLSEIPHSFEAAGISFNAFYIKVPQDEYFMIGDNRNNSADSRFWGPVPYRL IVGKPWFTYFSIDADRKIRWERIGRFVDTLQNDESLIYEQK >gi|257442819|gb|ACYG01000019.1| GENE 178 214101 - 214958 922 285 aa, chain - ## HITS:1 COG:Cj0855 KEGG:ns NR:ns ## COG: Cj0855 COG0190 # Protein_GI_number: 15792193 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Campylobacter jejuni # 1 281 1 281 282 323 58.0 3e-88 MTLIDGKSISAKVKDEIKAAASDLAAKGVEPALAVILVGEDAASKTYVASKEKACATCGI RSVAHRLSSDVSEAALLELIENLNDDESIDGILVQLPLPKHIDTNKILEKISPQKDVDGF SAINVGKLTSGLSDGFVPCTPLGVMRLLEEYGVQIAGKNAVVLGRSNIVGKPMASLLLNA DATVTIAHSKTKDLKRLCADADILVAAVGRAHFVGADMVKQGAVVIDVGINRGGDGKLRG DVDFDAVAPKCSFITPVPGGVGPMTIAMLLSNTIKSAKNRLRQRA >gi|257442819|gb|ACYG01000019.1| GENE 179 215735 - 216925 1497 396 aa, chain - ## HITS:1 COG:Cj0941c KEGG:ns NR:ns ## COG: Cj0941c COG4591 # Protein_GI_number: 15792270 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Campylobacter jejuni # 1 396 5 401 401 478 62.0 1e-135 MVKYLLFKYLRFDRSQPFITLSALLAFLGVGVGLTVLIVAMAIMNGFDKEFERKLFTMNY PITIHSHFRGGISKDDVEGLRADFPDLIFSPYISSQVIAKGGDRLEGGLIFGVNLNDEKR INSVVAAGAKDANLTDYGIMIGRGIKDEFMLDEGSKITMIFTKSDPGGFALIPKMKRFDV RADFSSGLIAYDKAYSYADASDLAKILGYDEGTFDGVHVFSNDPFKDLERIKKSLPGGAS AVGWWQQNGNFFSALALEKRALFIVLMLIILVASLNIVSSLLMTVMNRRQEIALLLSLGA SKKEVKRTFFALGATIGGGGIIFGLILGLFGVWLLGSFDIVNLPADVYGSSKLPMELSLG DLAMILIGAVLIVALSSWYPAKKATQIDVLQTLRNE >gi|257442819|gb|ACYG01000019.1| GENE 180 217686 - 220304 3155 872 aa, chain - ## HITS:1 COG:Cj0942c KEGG:ns NR:ns ## COG: Cj0942c COG0653 # Protein_GI_number: 15792271 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Campylobacter jejuni # 1 871 1 862 862 1124 69.0 0 MFKKVIHGIFGTKNDRIVKQYAKRAAQISALEENYASMDDATLKAEFEALRAQVRAGEKS TDDVLNEVFAIVREAGKRVLNMRHFDVQLIGGLVLNDGAIAEMKTGEGKTLVATLAVVLN AMEGKGVHVVTVNDYLAKRDAAQMGELYEFLGLSTGVIVGGEYDDAKRKAAYACDITYGT NNEFGFDYLRDNMKFSADEKVQRGHHFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIK ANEVARAMIRGEAPADPKGKATGDFTVDEKNRAVLITEAGISKAEKLFGVDNLYSLENAV LSHYLDQALKANYLFEKDVHYVVRDGQVIIVDEFTGRLSEGRRFSEGLHQALEAKEGVQI QEESQTLADITFQNYFRLYEKLAGMTGTAQTEATEFSQIYKLEVVSIPTNVPVIRKDQND LIYKTEREKFDAVINEIKRLNSKGQPVLVGTASIEKSEKLHELLVKENIAHSVLNAKNHE REAQIIKDAGVKGAVTIATNMAGRGVDIRIDDEVRALGGLYILGTERHESRRIDNQLRGR SGRQGDPGESRFFLSLEDNLLRIFGSDKIKNIMDRLGLKDGEHIESGMVSRAVENAQKKV ESLHFEARKNILEYDDVANEQRKTIYKYRNELLDPDYDLKDKIIQNREEYISSVLEELEI FDGVNIKEVDKFPIVAKIAQETGEVLENSELEKVDDFKELKEKIIGALAVSYENKMAPID PQQRKSIEKMLYLQIVDRDWREHLYQMDILKAGIGLRGYNHKDPLTEYKKESYNLFMELV MRLKSDSIRLLHSIQFKSQEEIEAEQRAMQERMESSNAKELAAASTNEAQLKGPDEFGDK KPKRNDPCPCGSGKKYKDCHGKGGPKKGGFAR >gi|257442819|gb|ACYG01000019.1| GENE 181 220425 - 220937 690 170 aa, chain + ## HITS:1 COG:Cj0943 KEGG:ns NR:ns ## COG: Cj0943 COG2834 # Protein_GI_number: 15792272 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Campylobacter jejuni # 1 168 1 168 169 113 37.0 2e-25 MKKTLISLAASCIFAFASGIEFDTLSANFSQTVQSDDAKISYGGDFSATKEHAVWHYKTP TIKNIFFSFTKVVVIEPELEQAIITNIKETPNLTAILANAKPNKKGVYEASFDDVKYLIE MKGDLPSKISYTDKMDNKVVINLSNVRKNAPVNEAIFKPTIPKNYDIITQ >gi|257442819|gb|ACYG01000019.1| GENE 182 220989 - 221504 470 171 aa, chain + ## HITS:1 COG:BH2238 KEGG:ns NR:ns ## COG: BH2238 COG0394 # Protein_GI_number: 15614801 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Bacillus halodurans # 1 170 17 156 160 82 28.0 4e-16 MAQSVMQNFINQSGLSERASVDSAATHTDEIGSPPYYETQRVLKEQKVPLVAHRAVQVTP ADYERYDLILCMDDENMRSLGRIFRGKDMAKVKFLLEFEEGNFADCDALNFKGALKQTAL NLKSGGSNLTASERLQIADPYYTRDFERCYADIKRGCEGLLRYIKNSDGIC >gi|257442819|gb|ACYG01000019.1| GENE 183 221570 - 222022 454 150 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0766 NR:ns ## KEGG: CCV52592_0766 # Name: not_defined # Def: 2-isopropylmalate synthase (EC:2.3.3.13) # Organism: C.curvus # Pathway: not_defined # 1 139 1 138 144 72 29.0 5e-12 MFRLLIVPYLIIEAFTTYYFVSANGFAAYAVEIVISAILGGYVVANRSWMGFFNLMKISP KEILSGVGFVVGGVFLIAPGIFGDILGVCIITASFYCVTSDVPKFNTGSENSEKRERKFW RRSRASDDVIDVEVIEENEIEIRKSIGEEK >gi|257442819|gb|ACYG01000019.1| GENE 184 222019 - 222948 952 309 aa, chain + ## HITS:1 COG:Cj0545 KEGG:ns NR:ns ## COG: Cj0545 COG0181 # Protein_GI_number: 15791906 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Campylobacter jejuni # 4 306 3 306 307 355 61.0 9e-98 MKNLIIATRGSVLALWQSKHIASLLNARGIQAQLKSMKTKGDKILDTPLAKIGGKGLFTK ELEESMLRGESHIAVHSLKDVPVEFPQGLVLAAICAREDVRDAMISEKYSKFDELPRGAK VGTTSLRRKMQLLSMRPDLEVISLRGNVQTRLRKLKDGEFDAIILAMAGINRLNLRAEVK HVAPFEISQMIPAMGQGALGIEAVDEPQILRAIEFLKDERAIIETTVERDFVRVLEGGCQ VPIGINARLEGENIHISAIVGLPDGSESIRQSIVAQKSQYQSVGAELARVFIEKGAKQLL ARAEAMASL >gi|257442819|gb|ACYG01000019.1| GENE 185 223045 - 223809 642 254 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0768 NR:ns ## KEGG: CCV52592_0768 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 31 254 16 235 235 176 43.0 1e-42 MSLFRFFKTAGFSKIFASLIFCASCALGLNASSNEELVRSLFSDANFDKNLHFKGEMRSY LKRKFYAADNYSEITVAPLGRSSEFSEIFHVFLGSKEKYFDLYVYTKDDGIYAVRVLAQT AIIEAIVSEYEKFNEAQKREFEQRTDADIINLKLILAPDKELMEFGKQNLAAFEKIYELY AGGEPERAKAEIKSLHLSHAETSGKKFMLLIGGITDNSVGFLRVQDEADLPQMSPSEFIM IEKIAPNWYLFKTT >gi|257442819|gb|ACYG01000019.1| GENE 186 224074 - 225090 801 338 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1826 NR:ns ## KEGG: CCC13826_1826 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 158 325 40 169 171 106 39.0 1e-21 MNEQNLNYIANLKVQDVPWSRLTTAYGRASGFAEIFEKLARAIEACDAARGLGGEQNLKS GPGAGQNLKSGSDCGQNSTDATRCGAAQNSINLTQKSESKFKKADNEAAKFKKGGETELK TDTAKCGKAEFKSADSVAIKFKASQASKFKTSAVDKSSDASERDKFDAKVLQDALSKIFN EIEHQSTLWHATPFALLFLTRIFIRARAAAGKNANKNNQNAVADKKRNYAADINSKDENC ENEAAGFIVARLGRFFAFMIEICDDTDKISHAAPLANFSDMLAEKYLWPQSDENDEERWE EHFYDDELFYSLYFYSRAVLDATGVDFAQFKPGPGRRF >gi|257442819|gb|ACYG01000019.1| GENE 187 225185 - 226372 1496 395 aa, chain - ## HITS:1 COG:Cj0198c KEGG:ns NR:ns ## COG: Cj0198c COG2256 # Protein_GI_number: 15791585 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Campylobacter jejuni # 1 390 1 389 393 479 62.0 1e-135 MSLSLKFRPKSLDQIAGQGKIVAVFKKFVAAGSIPHSIFFGAAGSGKTTMARVIASELNY DFYELDATSLKVEDIRKILSSHAGSLIKPLIFIDEIHRLSKTQQEVLLIPMENYAAIIIG ATTENPQFVLSSGIRSRSMIFEFEPLSYEDLEALLARVQGEIGFEMDEEARKYLLNSSSG DARSMLNLLEFALLADSAITLDTLRTLRANAVAAGVSSDDLHYELASAMIKSLRGSDADA ALYYVARLIDAGESADFIARRMVILASEDIGNANPNALNIAVSTLTAVSKIGYPEARIIL GQCAIYLAHSPKSNAAYLGINAALKFVRSAAPLPTPRYLINSDKQIADYKYPHDFGGWVE QAYMSEAAKFYESKGIGFEKTLDDWLAKIKAKGSV >gi|257442819|gb|ACYG01000019.1| GENE 188 227075 - 227989 671 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 304 1 305 308 263 45 8e-69 MKIANDVTELIGNTPLVRINTFGKNALILAKAEFLNPSHSVKDRIAWQIVKDALSSGKID KNSVLIEPTSGNTGVGLAMIAAKLGMKLILTMPSSMSIERQKLIAAFGAKIELTDPKFGM KGAVDRANELAASTPNSFIPSQFDNPSNPKAHFQSTGPEIWEQSGGKVDILVAGFGTGGT LSGTAKFLKSKNPNLKAYGVEPASSPLLTCGSAGGHKIQGIGANFIPANLDRSVIDGFLS VENDDAFAAARQLAQKEGLLVGISSGANVYAAAQIAAKPENRGKVIVTVLCDTGERYLST ELFK >gi|257442819|gb|ACYG01000019.1| GENE 189 227999 - 228412 431 137 aa, chain - ## HITS:1 COG:ECs3397 KEGG:ns NR:ns ## COG: ECs3397 COG1959 # Protein_GI_number: 15832651 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 4 91 3 90 162 82 42.0 2e-16 MALLSTKGVYGLAAILQIAKASEVAPISIKEIAERTGVSKNYLEQILNTLRNEKLVCSIK GKNGGYHLARDASEISFGEIFTALEKDLRMTSIQMSDPGLRAFFEKFDVKLAEIFNEPLS SYEEMMARSVQYLNFSI >gi|257442819|gb|ACYG01000019.1| GENE 190 228412 - 229683 1250 423 aa, chain - ## HITS:1 COG:Cj1727c KEGG:ns NR:ns ## COG: Cj1727c COG2873 # Protein_GI_number: 15793030 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Campylobacter jejuni # 3 423 5 422 423 423 51.0 1e-118 MQKETLATHFGYDSVAGYGTMAVPIYQSTAFNFGSSKKAADRFALRDLGPIYGRLTNPTT DVFEARLAALENGKAAIAVSSGQAAIFFAVANLAAAGENIIIAEKIYGGATTLLAHTIKR FGIEARIFDSETADNLEGLIDDKTRAIFFETLSNPQISVANTAKIATIANKHGVVTIADN TIPSPALYNPLDDGADVVIHSASKYISGQGLSIAGAIVSGKGLNSKLKGNPRYAHFNEPD ESYHGLVYADLVDNFDIYTLRIRLSLLRDIGATLSPFNAFQLIQGLETLPLRMQKHSQNA LKIAEFLQNHPKVKQVNYPGLPSSPFNAAIKAKFKNGYASSLMSFIVDSEETALKVVSKV KIFSVVANIGDTKSIITHPASTTHSQLNEEQLNRAGVPASLIRLSVGIEDANDLISDLSE ALK >gi|257442819|gb|ACYG01000019.1| GENE 191 229878 - 230234 397 118 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0892 NR:ns ## KEGG: CHAB381_0892 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 3 118 1 108 109 92 55.0 4e-18 MQIREKDERVKYIRALERFVKSAVVLLKREDFDAELFAKRIAKNYEILSKAAATNLDSPY TKALESFAKNVLDASEAGQTSDAVFRSALQHEANALQKLKNNKSYKKDKHKIDFLKDY >gi|257442819|gb|ACYG01000019.1| GENE 192 230235 - 231149 801 304 aa, chain + ## HITS:1 COG:Cj1233 KEGG:ns NR:ns ## COG: Cj1233 COG0546 # Protein_GI_number: 15792557 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Campylobacter jejuni # 1 170 1 170 206 124 40.0 2e-28 MKTVIFDMDGTLLDSSSAIEISVNNTRRELYGLAPLQKNFIVHTINDPSKNAFLEFYGKT EASAEELAFFEKEFVSNYRDFAVLYEGIEDLLHSCKKAGFFLAVASNAPSYTLSAILEKT GVRRLFDLVVGADEQMPSKPNPAMLLHVISRSPHKNAIFLGDSKKDELAALRGAEFLQNL EFQGGNDGESLNASRDTSRKNFSASSGSLSSCSKNLNADEKFRSNDSDAGGAATLSFKGA RISAKAEATEDAQAAAARCFQANLADLKGAKLEYLQVCWGFGEPSELSRNALSIAQAREI IGGI >gi|257442819|gb|ACYG01000019.1| GENE 193 232082 - 232327 416 81 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0894 NR:ns ## KEGG: CHAB381_0894 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 81 14 96 96 79 51.0 4e-14 MDIFESSPREKFFEILSAASPTLVQNEIEEALIRLIACERLCEARGISEREIKSFIAQQD LQDELNDKFLQMSGNILSNNE >gi|257442819|gb|ACYG01000019.1| GENE 194 232351 - 233319 1032 322 aa, chain + ## HITS:1 COG:Cj0541 KEGG:ns NR:ns ## COG: Cj0541 COG0142 # Protein_GI_number: 15791902 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Campylobacter jejuni # 1 322 8 297 297 287 50.0 2e-77 MKSFIADCGYEPASEMFDRLSPGKKLRSKLLLNIARKDEKSLRLCAIIELIQAASLLHDD VIDESSVRRGKPSINATYGSKNAVMLGDILYSKAYFELSKFESRIAAALSLAVTKLAVGE LMDVSLSDDFNDDASKYLQMIYLKTSALIEEVARCGAFLKFGSAENRGEISDMSGKKNEG EIPSAAKDHNKISSASAKFGKYGKNLGLAFQIIDDILDVTQSSEALGKPSLSDFAEGKTT LPYIYLYGNLDDAQRQKLRSFFKKQLCESEISWIKAKLSEHGIIERCINEARAYGQKALE AVAEFKNDKLEQIVRDMIDREF >gi|257442819|gb|ACYG01000019.1| GENE 195 233319 - 234848 1708 509 aa, chain + ## HITS:1 COG:Cj0542 KEGG:ns NR:ns ## COG: Cj0542 COG0373 # Protein_GI_number: 15791903 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Campylobacter jejuni # 3 226 2 222 432 239 58.0 1e-62 MAYMSVSFTHKNTDITVREKLSFSNDVRKKEILRLLASNSAIEECLVLSTCNRVEIFTAV SDFKAASKFVLLALSRVSGVSYDELAERADIYEDYGAIHHLFAVAASLDSLVVGETQIVG QLKDAFKFAKQNSYAGAQIARAIDEALKCAARIRNQTEISKNPISVSSVAVAMAKDRLGS LQGADAVVVGAGEMSELACKHLLANGANITILNRNLAGAQRLAASLLGENSLDAKDCADE NPGAGNNSDDLNSGNVANFAGENVAQKQNSKDGVNFNKDIFADGNESRIAGGNSKGDKNS APFANSSAQAQSRIKIDGLDNLKKYLNVNSLFFSATGSQEPIITDSLLEPKSFKRYFFDI AVPRDVELSQSEDVEVYSVDDLEEIVKKNLLLREEQAQIAYSIVAKCTNEFFKWLKAAAS TPIIKALRQSAKQVAELELAKALKKGYLKHSDAEEARKLIHQVFKAFLHAPTVNLKNLGD ADNADNAVNALVEIFELQENYEKFLKSRK >gi|257442819|gb|ACYG01000019.1| GENE 196 234866 - 236584 1878 572 aa, chain + ## HITS:1 COG:Cj0543 KEGG:ns NR:ns ## COG: Cj0543 COG0442 # Protein_GI_number: 15791904 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 569 2 569 569 751 62.0 0 MKFSKLFAPSLKEAPRDAVLPSHALLIRAGFIEQLGSGLYNFLPLGKIVLERICAVIRQE MDAAGAQEVSFSVVTSADAWKKSGRYAKYGKELLRFKDRKDNDFVLSPTNEEAAVLMVAD KITSYKQLPLNIYQINTKFRDEARPRFGLLRGREFTMKDAYSFHADAADMKREFEVMRQA YSRIFTRLGLNFRTVDADSGAIGGSGSKEFMVLADNGEDDIVVCKRCEYAANIEAARRAP KTTNAAAPETDGMMKFKTPAMKTIDAVAEFFKVDKFYTIKAVIKKALYEDRSEIVAFFIR GCDELQETKAQNACGALELVDASEEEIARAGFTAGFCGPFGLGEGAKFYIDAELKGAREM IAGANEPDYHYVGASVINFNESRFADLAAVGVGDACPCCGGELSITKGIEVGHIFQLGTR YSEPMGARFLDANGKARAFYMGCYGIGASRLIAVAIESSHDERGCVWPRELAPFELEIII SNHKDAAAVEFAEKLYEQCRERGIRVLLDDRAERFGVKMNDFELMGFPYAVLVGKALAER SVEFITRAGLKRQSVSADEILSFIERKLIEKN >gi|257442819|gb|ACYG01000019.1| GENE 197 237021 - 237695 389 224 aa, chain + ## HITS:1 COG:XFa0032 KEGG:ns NR:ns ## COG: XFa0032 COG0596 # Protein_GI_number: 10956743 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Xylella fastidiosa 9a5c # 5 224 26 247 251 161 42.0 9e-40 MIKNIILVHGAFADGSCYAEVIRRLQATGLNALAVQNPLTSLAADAQSISRKLDRLRGRA LLVGHSWGGVPITHVGRHVNVAALLYLSAIVPDSRESAADALTRQNAPMEGLSPDANGEI VLSAEAFAHMMANDLPAEQSRVLAAVQTPMNAAAFADKIGAAAWCYKPSYYLLTENDNAL PFAVQQRFAEQIGAKTRKIHSGHLSMISNPNAVAAWIAEIVTSI >gi|257442819|gb|ACYG01000019.1| GENE 198 237911 - 238180 187 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459699|ref|ZP_05624808.1| ## NR: gi|257459699|ref|ZP_05624808.1| hypothetical protein CAMGR0001_1015 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1015 [Campylobacter gracilis RM3268] # 1 89 1 89 89 161 100.0 2e-38 MSYTAALPSSPEDLQTIEGRVIYVQTNKSRGASYYRLNLVDSALKQRRFSLDVYGTQIDG YRAAMYDKDVKIWYQRIGVDTDFARADRP >gi|257442819|gb|ACYG01000019.1| GENE 199 238152 - 238292 61 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459700|ref|ZP_05624809.1| ## NR: gi|257459700|ref|ZP_05624809.1| hypothetical protein CAMGR0001_1016 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1016 [Campylobacter gracilis RM3268] # 1 46 1 46 46 80 100.0 3e-14 MLFDTKYDEKKIASFNQMNTLLRCVLLFFILGAGAALYVLHRSATV >gi|257442819|gb|ACYG01000019.1| GENE 200 238568 - 239035 378 155 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459702|ref|ZP_05624811.1| ## NR: gi|257459702|ref|ZP_05624811.1| hypothetical protein CAMGR0001_1018 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1018 [Campylobacter gracilis RM3268] # 1 155 1 155 155 293 100.0 3e-78 MLKIDMLKFFRSGEFADVRRGLSCAQIIVMFGSADASFKSAEAEILRYGAFEFHFFRGEI FMIFSDHFRSEPLDLGGVRAGQIEIEPWILSGCPAPIDLVAAKDALDREQIEYRERARDD GFELDLNSGVTLAFESLSGLGESRSYELTAFWIKF >gi|257442819|gb|ACYG01000019.1| GENE 201 239635 - 240213 654 192 aa, chain - ## HITS:1 COG:HI0648 KEGG:ns NR:ns ## COG: HI0648 COG2249 # Protein_GI_number: 16272591 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Haemophilus influenzae # 1 192 17 208 208 274 64.0 7e-74 MKILLINGGAPFNGKGGKLSKTLHELAKKTLQALGHETRETTIFEGYDIEGEVEKFLWMN AVIWQMPAWWMGEPWLVKKYVDEVFMGGIGKIVANDGRHSASPNDGYGTGGLIKGKSHML SVTWNAPLQAFDKPGDFFEGVGVDGVYLHFHKANEFLGTKRLPTFMCNDVVKNPDVERFM RDYEAHLKKVFG >gi|257442819|gb|ACYG01000019.1| GENE 202 240351 - 240971 868 206 aa, chain - ## HITS:1 COG:FN1116 KEGG:ns NR:ns ## COG: FN1116 COG3340 # Protein_GI_number: 19704451 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Fusobacterium nucleatum # 1 203 1 202 203 189 49.0 3e-48 MIEMFLCSYFAGAATLFEDFAGQNIRAKEVLFIPTAANVEEYRDYVDEAKEAFAKMGFTL QILDVSKTSEAEAKAKISAARVLYVSGGNTFYLLRELKKKGLADLIADRVRSGELVYVGE SAGAMIAAPSVEYASAMDDASGSEAVAAQTGLDLVKFYPVPHYGEEPFVQSTAKILKAYG GKLKLTPINNAEAIAVHGDKFEILGR >gi|257442819|gb|ACYG01000019.1| GENE 203 241344 - 242294 1305 316 aa, chain - ## HITS:1 COG:Cj0576 KEGG:ns NR:ns ## COG: Cj0576 COG1044 # Protein_GI_number: 15791936 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Campylobacter jejuni # 1 316 1 320 321 369 60.0 1e-102 MKLSKIAEILNIELNGADAEITAINSLQNARQSELSYCDSDKNEKFLSATKAAAVLVKCG TAVPNGVRALECENPHLAFAILSAHFAKPLIRSGVPAKIAASAQIGQNVHIGVNSTIGEN CVILSGAYIGDDVHIGSDCVIHANAVIYNDAIIGERCIIHANAVIGSDGFGYAHTKTGEH VKIYHNGNVVLQDEVEIGACTTIDRAVFGSTIVKRGSKIDNLVQIGHNCELGQNCLIVSQ VGLAGSTTLGRNVVMGGQSGSGGHVSVGDFAQIAARGGISKDLAGGKNYAGHPIMELSEW FKLQAKIVRFFKDKKH >gi|257442819|gb|ACYG01000019.1| GENE 204 242326 - 242796 709 156 aa, chain - ## HITS:1 COG:Cj0575 KEGG:ns NR:ns ## COG: Cj0575 COG0440 # Protein_GI_number: 15791935 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Campylobacter jejuni # 4 156 1 153 154 210 69.0 6e-55 MNSIRRVISVVVTDEHGVLSRISGLFAGRGYNIDSLTVAPIPNTGLSRLSIVTSGDERVI EQITKQLHKLIPVYKVIEDAKFVEKEMVLVKIALGENLAGLDAVLKAYNGSIANSDDSKI VIMACDDADRIDGFLKTIKKYNPIDIVRGGSVALDM >gi|257442819|gb|ACYG01000019.1| GENE 205 242798 - 244492 2055 564 aa, chain - ## HITS:1 COG:Cj0574 KEGG:ns NR:ns ## COG: Cj0574 COG0028 # Protein_GI_number: 15791934 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Campylobacter jejuni # 1 562 1 561 566 798 70.0 0 MKEISGSQMIVEALRQEGVEVVFGYPGGAALNIYDEIYKQKYFRHILVRHEQAAAMAADG YARASGKVGVAVVTSGPGFTNALTGLATAYSDSIPIVLISGQVATSLIGTDAFQEIDAIG ISRPCVKHNYLVKTIEELPRILKEAFYIARSGRPGPVHVDIPKDVTAKLGVFEYPSEIKM QTYKPNYKGNAKQIKKAVELIANSKKPILYIGGGVISAGASELVRELSEFAQIPVVETLM ALGAVRSDDKNCLGMVGMHGSYAANMALSESDLIICLGARFDDRVTGKLSEFGKNAKIIH VDIDPSSISKIINADYPIVGDVKSVLEEMLPRIKSEVSPANFEQWRELIRKYDEIHPLKF NDSDEILKPQWVIQSTAKIAGEDAIIATDVGQHQMWVAQFYPFCKPRTLLSSGGQGTMGY GLPAALGAKAYAGDRPVINFSGDGSILMNIQELMTASASGLNVVNIVLNNNFLGMVRQWQ SLFYGQRFSSTDLSSQPDFIKIVEGFGGVGFSVSTKAEFEDALKQALASKKVSVIEAKID RFENVWPMVPAGGALYNMIFEQES >gi|257442819|gb|ACYG01000019.1| GENE 206 244935 - 245672 609 245 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1164 NR:ns ## KEGG: CHAB381_1164 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 86 1 86 89 94 48.0 5e-18 MKNLVILALLVSLAAAKININEASRYELMTIGGLDAGRADMLMQYRQKREISSADELKGI NGFASYDTAKLQKSFEISPRANVQQPVQPDRDIVVVEKTRTRTVYGGSTYRRVENYGNGI TITETGTLPPPLPRGYGRHGGMMSPPPPPPGGMPPPPGGMPPPPGGIKPPPPPPPPPSSD YYHRSSNRMSDSEIGGSSRRNMPVPMHMGTIRSKRSSSVTSFGDCDPQSGNCASVGVGVQ VDRGF >gi|257442819|gb|ACYG01000019.1| GENE 207 245785 - 247383 1828 532 aa, chain + ## HITS:1 COG:Cj0688_2 KEGG:ns NR:ns ## COG: Cj0688_2 COG0280 # Protein_GI_number: 15792037 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Campylobacter jejuni # 203 529 13 339 340 396 62.0 1e-110 MNGILLLCDEPAAYQSELKKLDKILSMSFHNVLQLCIAGDNALFSRSELEKALADGQDER VRKAAIERFTQILEQCNFVLVHGVAGADLRELNLQIAKDLNIPVCGFYPNEIAARIGTRL IAAAKAISFASVYEDKISFSALRSAQEGANSKKSELCGKNSACEKGAKFHDENSACQSGA IELDKVIADKSYFTDAANSTRCEILTPLKFESKLYAKARANVKTVVLPESDDERILRAAA IIKQSGAANLILLGRQDEVQKSANKLGLDLSGVKILDPQTDASLEKFARDLYELRKAKGM SEAQARDLVRDRTYFGTMLVYEGLSDAMVSGAGTTTAETIRPALQIIKTKPGIATVSGAF IMCLDTQALLFADCAVAPSPSAEYLAGIAISSAATAKAFGLEPRVAMLSYSSGDSGSGES VEFIKTATQKAREKAPDLTIDGPLQFDAAVDAAVAKKKMPGSAVAGRANVFIFPDLNCGN ICYKAVQRTAGAVAIGPILQGLKKPVNDLSRGCKVADIVNTILISAIQAGEN >gi|257442819|gb|ACYG01000019.1| GENE 208 247384 - 248616 1410 410 aa, chain + ## HITS:1 COG:Cj0689 KEGG:ns NR:ns ## COG: Cj0689 COG0282 # Protein_GI_number: 15792038 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Campylobacter jejuni # 1 398 1 396 396 419 51.0 1e-117 MDILVINSGSSSVKFKFHDMLNHACIASGLIEEIGSTHASGSINCANGRGIKVENEQIPN HETAIAIAIDLLKQSGVINDLTQVGGIGHRIVQGADYFDAPALIDEDVMAKIAELAPLAP LHNPANLAGIKSCLKIAPKIPNVAVFDTIFHQSIPPYAYMYALPYEFYEKYKVRRYGAHG TSHWFVSTMGAKFLRKKYENFNAITLHLGNGSSVSAIENGKCIDTSMGLTPLEGIIMGTR CGSIDPAIIPYIERVAGYNAQDMDVIMNKKSGLLGICGASDLRKVYEKMEGGEPRAKLAF EMLVYSVVKMIGAYYAVLGRVDALIFTGGIGENAPHFRQNVCEKLAHIGIEIDATKNAKN TGSIRNLSAVDSKIKTLVIPTNEELAIAEATVDTINKNSAQIDYQKYSEF >gi|257442819|gb|ACYG01000019.1| GENE 209 248800 - 249072 141 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459713|ref|ZP_05624822.1| ## NR: gi|257459713|ref|ZP_05624822.1| hypothetical protein CAMGR0001_1029 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1029 [Campylobacter gracilis RM3268] # 21 90 1 70 70 124 98.0 3e-27 MPYYPVNFTIRTCFGILRSNLKPNLLNLTEQSFFKNKVSLLLTRSDLGGVWAADLLAVAG RSKVKGSFASIAPSAPPLPRKNLSLIGSDK >gi|257442819|gb|ACYG01000019.1| GENE 210 249134 - 249328 308 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459714|ref|ZP_05624823.1| ## NR: gi|257459714|ref|ZP_05624823.1| hypothetical protein CAMGR0001_1030 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1030 [Campylobacter gracilis RM3268] # 1 64 1 64 64 111 100.0 2e-23 MSDLLNSQGAQEQEAPYPDTKFTKFFGRLYAAVFVLFAITALSVFVLPENILDASAACAD FVKL >gi|257442819|gb|ACYG01000019.1| GENE 211 249393 - 249908 765 171 aa, chain - ## HITS:1 COG:Cj0772c KEGG:ns NR:ns ## COG: Cj0772c COG1464 # Protein_GI_number: 15792110 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Campylobacter jejuni # 1 165 3 165 257 194 61.0 6e-50 MKNLLKYSLVALSLTVAANAAEKIVVGATPVPHAEILEVVKPILAKDGFTLEIKEFNDYS TPNLATEDGDLDANYFQHLPYLEEFNKNKGTHLVKTVGVHLEPMGVYSKKIKDIKELKDG STVAIPNDPTNESRALDVLASAGLIKLNDNPLKTPLDITENPARLIHNAAT >gi|257442819|gb|ACYG01000019.1| GENE 212 250154 - 250489 284 111 aa, chain - ## HITS:1 COG:Cgl0847 KEGG:ns NR:ns ## COG: Cgl0847 COG0640 # Protein_GI_number: 19552097 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 10 100 13 104 104 58 32.0 4e-09 MQYVDILALKSEFMRVLAHPIRIGIVEILGDKKMSVGEICELLNKEQATVSKHLGVLKNG GILKSEKSGLNVFYSVDICCLPNFLECLKNILEEKAAKNSKNARGVIKSLR >gi|257442819|gb|ACYG01000019.1| GENE 213 250591 - 251550 673 319 aa, chain + ## HITS:1 COG:Cj1560 KEGG:ns NR:ns ## COG: Cj1560 COG0701 # Protein_GI_number: 15792865 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 48 315 1 271 274 178 42.0 1e-44 MLDLFNQHNIFEFIKFFILYFTEISLLFFCVSFLVFIVSEKFSQKLKKHLISTKISSFIK AFLVGAITPFCSCSTIPLLNGFLKSGVSLGVSSVFLLSSPLVNPVILTLLFMSFGFKFGI IYFTVIFISSLAFGLLLSKADQNLFLKDDFLKPKFSPNNPTKSFVFTPVNQTRACSCKDI KNNKNIYKMALLNSVKEYKKLFYYILLAMFIGAAIHGFVPQKLISNYLGSSDITSILISA FFGILLYVRVEALVPIGLALLASGASAAAFGAFVITAAGVSLPEIILLNRFFRPKFMAIF IAFILCVALAFAMFLKSFF >gi|257442819|gb|ACYG01000019.1| GENE 214 251555 - 252727 1181 390 aa, chain - ## HITS:1 COG:Cj1222c KEGG:ns NR:ns ## COG: Cj1222c COG0642 # Protein_GI_number: 15792546 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 121 388 131 396 396 214 42.0 2e-55 MSEKTALTLKILSLYLISSALFLGYFFKINYRMNEAALLSHRIKELKEIKMMIYMKASMD GLESLADFEREKGVSACIFKPNSDEIYGCGGELGALDKAKLKAEFISGGRLGIYENLQNM EERNAFSKAKIILLGSSVQGEILTLRIKTAAMMTALLGVILAVAFYLVRLGTKPLYDKID TLNRFIKDSTHEINTPLSIISMSVETMRHAELGEYNAKRVANIDLAAKTLSRIYEDLVFL TFGMNKEGEISSIDLKSLVASRCEYFAPFIQKRRLSLKTDLSDASMSANVYEISRLIDNL LSNAVKYADAGGYVDVRLRRGELAISNSGEGIDKKKGDEIFRRFARFNSSEGGFGIGLSI VSEVCKKYSFSISYDSVPGEVTTFRLTWRE >gi|257442819|gb|ACYG01000019.1| GENE 215 252720 - 253382 516 220 aa, chain - ## HITS:1 COG:Cj1223c KEGG:ns NR:ns ## COG: Cj1223c COG0745 # Protein_GI_number: 15792547 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 16 219 17 220 221 207 54.0 1e-53 MSKILLVEDDETLCDLIGEYLKDAGFDVCVCSDAQSAADLAYEQKFDLFIFDVKIPKGDG FSLLKELRKSGDRTPAIFATSLNTLDDLEVGFKSGCDDYLKKPYELKELLLRVNSLIKRS FSHNFDEFVTIDDEFKFYFASKELRRSGVPVALSNKERELLALFLQNKNRLLSKDEIFSA IYAFDETPSEEALRTYIKNLRRVLGEEHIINRRNAGYLYV >gi|257442819|gb|ACYG01000019.1| GENE 216 253382 - 253615 435 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459720|ref|ZP_05624829.1| ## NR: gi|257459720|ref|ZP_05624829.1| pyruvate kinase [Campylobacter gracilis RM3268] pyruvate kinase [Campylobacter gracilis RM3268] # 1 63 1 63 77 70 100.0 4e-11 MKKLTLFALSALFAGTFAVAADMGMKDEMKDANTSMHNSAKEMKGDMKDMHKDAMKEGKH MKDEMKGEMKKEMKKEM >gi|257442819|gb|ACYG01000019.1| GENE 217 255054 - 256043 1364 329 aa, chain - ## HITS:1 COG:Cj0774c KEGG:ns NR:ns ## COG: Cj0774c COG1135 # Protein_GI_number: 15792112 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Campylobacter jejuni # 1 319 1 336 336 371 58.0 1e-103 MIKIENLKKFYGATQIIDGVSLTVEKGEIFAIVGHSGAGKSTMLRCINGLEDYQEGSLKV EGREVRELSGAQIRELRKNIGMIFQHFALMSRRSVAQNVATPLAFWGHPEDHTKRRVAEL LELVGLADKANAYPSELSGGQKQRVAIARALALSPKILLSDEATSALDPNTTAQILSLLR RINRELGITIVLVTHEMEVVKGIAQRAILLKGGRVSNSGDIVSLFLHPDENMKEFLGEEE VLPASGVNIRLFFPPAVAFDSVITHMARALEINFNIVWGKLERLDKNVVGSLVINVKPAH VARVEEFIKNAGVIYEIVNEDEIKDYALS >gi|257442819|gb|ACYG01000019.1| GENE 218 256087 - 257073 1099 328 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1251 NR:ns ## KEGG: CCC13826_1251 # Name: not_defined # Def: diaminopimelate dehydrogenase (EC:1.4.1.16) # Organism: C.concisus # Pathway: Lysine biosynthesis [PATH:cco00300] # 1 328 1 328 328 592 92.0 1e-168 MSEKIKIAVLGYGNLGRGVELAARNSKDLQLSAVFSRREPHSVQTYGAPVFSADEILSHK GKFDVLVLCGGSATDLPTQTPEFAKEFNVVDSFDTHAKIPEHFAAVDAAAKKGGNVGIIA VGWDPGLFSLNRLFGESVLENGSSYTFWGKGVSQGHSDAIRRIEGVVDARQYTVPIESAL ERVRTGENPKLSTREKHLRECYVVAEDGADKARIEKEIKTMPNYFADYDTSVHFIDLATL KKEHGGIPHGGFVLRSGATGEHGENKHLIEFSLKLDSNPEFTASVLVAYARAAYRLAQKG ERGAFSVFDIAPALLSPKSTDELRREIL >gi|257442819|gb|ACYG01000019.1| GENE 219 257134 - 257280 163 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKGSIGGFTLGTVIAVALSWGANKSIMWAIIHGFLSWLYVIYYFLLR >gi|257442819|gb|ACYG01000019.1| GENE 220 257321 - 259936 3037 871 aa, chain - ## HITS:1 COG:Cj0775c KEGG:ns NR:ns ## COG: Cj0775c COG0525 # Protein_GI_number: 15792113 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Campylobacter jejuni # 5 867 2 866 870 1226 66.0 0 MADFYDAKAVEESFYKIWEQRGYFEIDGNKDIQQKGKNFCIMLPPPNVTGVLHIGHSLTY TLQDIMTRYKRMDGYKTLWQPGLDHAGIATQNVVERELLAQGIKKEAIGREEFLKHVWHW KEQSGGQIVKQMKRLGVTPAWSRQRFTMDEGLKNAVRKAFVSLYDAGLIVRGNYMVNWCT HDGALSDVEVEHKENKGKLYHLRYYFADEQDKFIVVATTRPETYFGDTAVMVNPADERYK NLIGKKVVLPLIGREIEIIADEYVDMSFGTGAVKVTPAHDTNDYEVGKRHELEFITVFDE KGILNEQCGKFKGLERLAARDQIVAELERLGFIEKIEDYENQVGYCYRCKNVVEPYISQQ WFVRADIAKEAIAKVNSGEAEFFPKHWINSFNAWMRELKDWCISRQLWWGHRIPVFYCDC GHQWADERESPDACPKCGGKNFTQDPDVLDTWFSSGLWPISTLGWGNGEALKNEKWFEED LSEFYPNTMLITGFDILFFWVARMMFQCQNAMGELPFRDIYLHALVKDKDGKKMSKSSKN VVDPLLKIDEFSADILRFTLTILCVQGRDLRLSDDKLLIYRNFTNKLYNASKFLLLNASK FDDLDAAQIKTSLGKYMLSRFNCCVSAVRENLDEYRFNDAATELYKFFWDEFCDWGIELS KADKAAIGELGMIFKEAMKLLSPFMPFLSEYLYQELSGTKLQDARSIMVMRYPQPGERDE RIEELFSLVIEAIVSIRRAKATIELGNARVAKAYVKSAVDLSAAADYIKTLAKVDEVEFT QQNIANSARDVSERLETFVPLEGVDLSGVISRLNAQKAKLEKEVAKLSSMLNNEKFIASA PQAVVEANREGLQSAQEKFAKVCDELKAFGE >gi|257442819|gb|ACYG01000019.1| GENE 221 260170 - 260946 1000 258 aa, chain + ## HITS:1 COG:Cj0772c KEGG:ns NR:ns ## COG: Cj0772c COG1464 # Protein_GI_number: 15792110 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Campylobacter jejuni # 1 258 3 257 257 282 57.0 5e-76 MKKFLLASLLSASVVSFALAEKIVVAATPIPHAEILEQIKPDLKAQGYDLEVKVFNDYVT PNLATDSGDVDAGFFQHVPYMEEFNANKGTKLKATVGVHLEPMGIYSHKIKNLKDLKNGA KVAVPNDPTNESRALDLLVAAGLIEVDQNAKLRTPLDVTKNPKNLEILELEGAALPRTLG DVDIAVINSNFAFNANLNPIKDSLFLEKAEGNPYTNVISVKEGNENSPKIKALDKAIQSE KVKKFIETQYKGAIIPSF >gi|257442819|gb|ACYG01000019.1| GENE 222 261061 - 261885 996 274 aa, chain + ## HITS:1 COG:Cj0596 KEGG:ns NR:ns ## COG: Cj0596 COG0760 # Protein_GI_number: 15791956 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Campylobacter jejuni # 7 272 4 272 273 154 39.0 2e-37 MKRILSFSFVAAMAISSLNAGVLATAKDANITITDEDVAPFLAQGMQHGGQEPTADEKKK LIDDLIKYKLLIAEAKKSGIENSDEYKHQLELAKDGIAFNLWQREQAKDVSVSDEEAKKI YDENKQNFMQPDSVTASHILVADEKAAKNAIAKLSKVKKENLKEEFNKLAKEISIDPSAK ENGGDLGSFGKGMMVPEFEKAAFALKDGEMSKTPVKTQFGYHVIYKESSKKAETMPFEKV KDLIKNQLLPSKVNKKIDDKANELFGKLNIEYAK >gi|257442819|gb|ACYG01000019.1| GENE 223 262122 - 262721 678 199 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223039927|ref|ZP_03610210.1| ribosomal protein L22 [Campylobacter rectus RM3267] # 1 198 1 196 208 265 60 1e-69 MLSNIVNFIVEFVAGWGYLGIFVMMFLESSFFPFPSEVVMIPAGYLASKSQMSFVIAFVC GLGGSITGALFNYYLCYFFGRKIIAKYGKYVGITEEKFEKFEAFFNRHGEISTFNCRLIP GIRQYISLPAGLAKMNVARFVLFTGLGAAIWTLILMSLGYFIGENEELIKQDLHLITIAL FAVVIIISLLYVYFIKRKK >gi|257442819|gb|ACYG01000019.1| GENE 224 263037 - 264443 1598 468 aa, chain + ## HITS:1 COG:Cj0087 KEGG:ns NR:ns ## COG: Cj0087 COG1027 # Protein_GI_number: 15791475 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Campylobacter jejuni # 4 468 3 467 468 614 64.0 1e-175 MAKTRKEHDFIGELEISDDFYYGVQTFRALENFHLSGRALKDYPFFIKAFAQIKKAAALA NKEVGVLDAQKADAIAKACDRLIAGEFRDQFVVDMIQGGAGTSTNMNTNEVITNIALESM GHKKGEYQYLHPNDHTNLGQSTNDTYPSSIKVAAYAKLTDLLKAMENLKKELEVKAKEYK DVIKMGRTELEDAVPTTLGNTFNAFATYIKTDIALIKAARESMTYLNMGATAIGTGINCH PDYKNVVEKKLGEITGVKFKAAEDFIAATQDTADFVHVSGALKTAAVRLSKIANDLRLMN SGPRCGLGEIELPKMQPGSSIMPGKVNPVIAEVVGEACYEVIGNDVTIMLCSERGEFELN AFEPGIAYALFNSIVLLENAMNTLAEKAIKHLKANPEACLKSVLNSVGIVTAFNPYIGYE KSASIAKEALQTGKSVGEICLERGYLKKEEIDKILEPKSMLNPHMSKK >gi|257442819|gb|ACYG01000019.1| GENE 225 264729 - 266072 1355 447 aa, chain + ## HITS:1 COG:Cj0088 KEGG:ns NR:ns ## COG: Cj0088 COG2704 # Protein_GI_number: 15791476 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Campylobacter jejuni # 1 447 1 445 445 421 60.0 1e-117 MDFMVILQFIVLLGGIYLGVKLGGMGVGYAGGLGVVVLAILGMKVDMKDIPIDVILIIAS VISAITALQVAGGLDYLVQVASKILRKNPKQINFLAPIVTYLLTILAGTGHTAFSMIPVI VEVAKTQNIKPSAPLALSVVSSQVAITASPISAAFVAMSGLCEKLGVSYPKLLFICISTT FVAMIITAFIVNKFYDLDLSKDPVYKERLSKGLVAEIKAEEYKEPKPYAKRSVAIFAIGV LIVVCYALAISKSVGLVEKPILSRDSAIISFMLTIGFLIAVLCKIDTGKLLSTSTFQSGM NACICVIGIAWLGTTFVNGHIDSIKEVAKNVVTQYPFVLAVALYFLSCLLYSQAATTKVM MPAVAAALGMTSPENSGQIWILVASFAAVSGLFVLPTYPTTLGAIAMDDTGTTRVGKFVF NHSFFLPGTIMVALSVALGFLVAPALI >gi|257442819|gb|ACYG01000019.1| GENE 226 266356 - 266883 659 175 aa, chain + ## HITS:1 COG:lin1898 KEGG:ns NR:ns ## COG: lin1898 COG2249 # Protein_GI_number: 16800964 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Listeria innocua # 1 168 1 168 177 182 50.0 4e-46 MKNLIIIAHPDMASSHANKAWREVAKKQADKFDIHEIYAAYPNGKIDVAREQELLLSHDK IIIQFPLYWYSYPPLLKQWFDDVFAYGWAYGSAGGKLKGKEFALAITIGDERNNYKKDGT IGFGIEEVIAPFKCAMNFTGAKLLPCHFGYGFSFHPDSEYIAKSAEKYEEFLAKF >gi|257442819|gb|ACYG01000019.1| GENE 227 267479 - 267811 203 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459740|ref|ZP_05624849.1| ## NR: gi|257459740|ref|ZP_05624849.1| hypothetical protein CAMGR0001_1056 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1056 [Campylobacter gracilis RM3268] # 1 110 1 110 110 207 100.0 3e-52 MKERSYPNDPAVKYPHKLRRIFIEGMGGELQGISSEYVFAASCAQAFKRRKVKANKLKSE SINSRAIGKLGSVAKWAQTFGSFELFARAQGGRRYFALNLFLDLGFACVE >gi|257442819|gb|ACYG01000019.1| GENE 228 268480 - 268650 56 56 aa, chain - ## HITS:1 COG:no KEGG:Coch_0288 NR:ns ## KEGG: Coch_0288 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 1 56 125 182 224 94 68.0 2e-18 MGSGSGSTMTCVLARNGLDFLRLLAIGYDEICWDEDFSAPPNSDDFIVHPNVKFQQ >gi|257442819|gb|ACYG01000019.1| GENE 229 268562 - 269032 332 156 aa, chain - ## HITS:1 COG:no KEGG:Coch_0288 NR:ns ## KEGG: Coch_0288 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 1 114 1 111 224 117 53.0 2e-25 MKNLLLAQLREALPQGMRVPSELEVLYAWIEANGFYDDAGGRRRGYLYPQDRLQQSWSDD EREGGTDIVFFTDEPKNRDEELRYWFYGEDRELTAEIKQRLCVFAGSARRARCARCGWTM RARLDPAHGLRLRFDHDLRFGSQWARFFAIACDRIR >gi|257442819|gb|ACYG01000019.1| GENE 230 269576 - 270262 625 228 aa, chain - ## HITS:1 COG:PA3885 KEGG:ns NR:ns ## COG: PA3885 COG2365 # Protein_GI_number: 15599080 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Pseudomonas aeruginosa # 60 214 28 180 218 91 33.0 1e-18 MNFKTLALAVVFFFATGINAELATEANSINFRKTSSAEQNLADAKDAKFQHAHFKNADTA ASGTNSNSSQKATLIDEAKNFYRVDELLFRSAQLDGSYAAKLHELGIKSIVNLRHFSRGG DKRAFGDQFWLANKPLQSWEIKPAQIADVLRTIRERQKEGAVLVHCYHGADRTGLVVAMY RVIYQGWSLDAARSEMIDGGYGFHSMWQDIAGFLTPQNEALVRAELGI >gi|257442819|gb|ACYG01000019.1| GENE 231 270655 - 271113 769 152 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0326 NR:ns ## KEGG: CCC13826_0326 # Name: not_defined # Def: septicolysin # Organism: C.concisus # Pathway: not_defined # 1 151 1 151 151 149 70.0 4e-35 MKLAEALILRADIQKRIEQLKSRLADNAKVQEGEKPSEEPKVLLAELDALTSELERLIVR INLTNCTAKADGKSLTELIAKRDILTLKAGALRTFAQASAQKVDVYSRSEIKILSTVDVA ALQKQVDELARQIRQLDTTLQGANWQTDLIES >gi|257442819|gb|ACYG01000019.1| GENE 232 271132 - 271812 1020 226 aa, chain - ## HITS:1 COG:YPO2970 KEGG:ns NR:ns ## COG: YPO2970 COG4380 # Protein_GI_number: 16123151 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 4 219 2 216 218 197 48.0 2e-50 MKNKAQIAIFSVFVALFFNACALSEPEIYDYSALQQAKPRSILVLMPSNETTEVDAGAAV LANAIYPLSEAGYYVFDPALVHETFKNNGIYEASDIQNVSAHKLRQIFGADAVLYLNVVK YGTSYMLIKSTNVVAVNAKLVDLRSGATLWEGSAQVSDDSGGGGNNLVGMLISAVVKQIG DTITDAGYKLSASADVILLGQNCNNCLLYGPYSPHYGQDRQLGGGK >gi|257442819|gb|ACYG01000019.1| GENE 233 271809 - 272303 512 164 aa, chain - ## HITS:1 COG:YPO2971 KEGG:ns NR:ns ## COG: YPO2971 COG4259 # Protein_GI_number: 16123152 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 111 1 109 118 74 39.0 7e-14 MKASSALALAAAAVIFCGCGGGTRNQIYYWDGSYTDSTYQYLKQEGDVGEQIEALEKSIQ KAYEKGLKVPPGLYSHLGLLYLSAGNGARARENFEKEAQAFPESKPFLTFVTNPAALKKA EAVTKPGADKVQGSSEREVAKAASAKQGKAAAKQGGKTNKKAKK >gi|257442819|gb|ACYG01000019.1| GENE 234 272313 - 272990 681 225 aa, chain - ## HITS:1 COG:YPO2972 KEGG:ns NR:ns ## COG: YPO2972 COG1462 # Protein_GI_number: 16123153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Yersinia pestis # 19 223 16 220 223 266 70.0 3e-71 MNFKKTISVAVIAASVLALFSGCAKESSRVVQTPTVASLNTNYSGERIAVSVGRFNNQSS YNNGVFSDGEDRLGNQAQTILISSLQQTGRFSVLDRTNMRAIKEESAISKSAQNLKGARY VITGDVTEFGRKTTGDHQLFGILGKGKTQTAYSKVNLNIVDVRTSEVVFSTQGAGEYELS NREVLGFGGTAGYDSTLNGKVLSLAIIEAVNNLVNGLENGAFKVR >gi|257442819|gb|ACYG01000019.1| GENE 235 273440 - 274060 168 206 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459751|ref|ZP_05624860.1| ## NR: gi|257459751|ref|ZP_05624860.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 206 32 237 237 362 99.0 1e-98 MKRLINFLRRICTDLLAGRVLLHPILLTAVFLAAKFGALYVIDEKILGSGYDLGIFGEFA YYIFFDFVAGAYFIALCAHIIYASPEVKSLKILRKILLAIILASCALGYFSSDVNYQKLG VLEAFLIASLICICIYSVATEISNDRSNAVFWGFAYVLNYIGALFVIFHAQAADVVAAIL IILCPLAWAFYFKYEFQKSLAQTDEV >gi|257442819|gb|ACYG01000019.1| GENE 236 274122 - 274862 966 246 aa, chain - ## HITS:1 COG:Cj0343c KEGG:ns NR:ns ## COG: Cj0343c COG0730 # Protein_GI_number: 15791711 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 18 230 21 240 261 126 39.0 4e-29 MFFEYILIGACVGFISGFFGIGGGTVVVPVMMLFGYDVKYAIGISIMQMIFSSIFGSFVN FKSKMLDVAPALVLGLGGFCGALSSGFIVSYFSSKFLLGTLILVQIINLIKLFKTPTEPA GETNKSKILLFLVGLFVGAVAISVGIGGAVFVMPILISFLNYDIKKAVSTGLFFVIFSSS AGFISLSAHGLVYYEIGALLGVGSLAGVYAGVKTSHKIGKKAQKRWMIALIVAILCVTIK KFIALN >gi|257442819|gb|ACYG01000019.1| GENE 237 274978 - 275655 839 225 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459754|ref|ZP_05624863.1| ## NR: gi|257459754|ref|ZP_05624863.1| hypothetical protein CAMGR0001_1070 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1070 [Campylobacter gracilis RM3268] # 1 225 1 225 225 452 100.0 1e-126 MPNAVNSAQYLARIKQAEALFEGQNFTRRQTINLGSGYEIVKDAYRLGAANFSGGEYTLF GAPQIISWRSIDDRAEFFSLIRHANGKFYLIFRQDLYGYSVLELDRGRIMRFVPDAWTLG KESFIWGGVHYLRGWDALAVSGCYWGAPNGVHLVSFAEPMSEEQRYVDVLDCMQGGYDIY EQADFAGFEGNELSLKCFRADALRYEKVKISREQYREWMREAKRL >gi|257442819|gb|ACYG01000019.1| GENE 238 276324 - 277748 2037 474 aa, chain - ## HITS:1 COG:BS_yuaG KEGG:ns NR:ns ## COG: BS_yuaG COG2268 # Protein_GI_number: 16080153 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 66 474 67 509 509 63 26.0 6e-10 MDEILYLIGAAVGVLIVLFIIVPLFFRRIVETNEVHIVQSARKTTSYGKDTGNGNSYYEF PSWVPVLGVTKIVLPVSVFSIKIEDYEAYDLGRLPFVVDITAFFRIMDSNLAAQRVNNFE DLNNQLRNIIQGSIRSILSSRVLEDILQIRSELGDDFTKAVKTQLQNWGIEPVKNIELMD IRDSSGSKVILNIMEKKKSQIEKESRVEVANNTKLAQIAEIEAAQATEVRQQEANKMVGL KTVENEREVAISKEQAEQLIKDQQKITQEKAMEVVRVNDVKQAEIKKQVEIVKAEQEQRK IEIDAEARKNAKIRDAEAIKENQILVAQGDKEKQFLAAAALLEMKDKEAQGTLKIGSAEA EALRLKELAPVNAQIELAREIGENQGYQTYLISIKQIEANRDIGLEQAKALSAADLKIIA NEGSVGEGMSKFGEILSAKGGTQLAAMLEALNQSEVGKKVLDKISDAKEGDKSE >gi|257442819|gb|ACYG01000019.1| GENE 239 277908 - 278927 1197 339 aa, chain + ## HITS:1 COG:CAC1988 KEGG:ns NR:ns ## COG: CAC1988 COG0614 # Protein_GI_number: 15895258 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Clostridium acetobutylicum # 22 336 41 353 355 228 36.0 2e-59 MKKFLLLLLAGALFASAAELRTIKDMDGAEVKIPAKVERIAALWHSNNQILLALGGADKI VATTDNISKNAWFLKIYPRLAQIPVLLKNNDVNLEELMSRNPDVVIVPTALAGENLAKQG FTVLKASFSDYEQMRRSIRMCGDMLGGDAPQRAKDLIANLDKNIALVSGRTANLSPDKRP RVLHIVGGSDLLKIDGKGTLIDSWIELAGGTNAITATKGPMKTITAEEIIASNPQIIIVG GDHNEDAVEKIKSSPVYSGTDAVKNGRVYGNPRGVFNWDRYGADTVLQILWAAKTIQPEL FADIDIKAETKAFYKKFMNYELSDEEFGYILKGLSPEGK >gi|257442819|gb|ACYG01000019.1| GENE 240 279509 - 280072 613 187 aa, chain + ## HITS:1 COG:no KEGG:PG1466 NR:ns ## KEGG: PG1466 # Name: not_defined # Def: hypothetical protein # Organism: P.gingivalis # Pathway: not_defined # 2 187 5 190 190 231 63.0 8e-60 MEISFFTTLKPALAGAWIPSFAMVLIQFAYMFIYKEVGKRATDTSWYTLADKRNAIISSL LQVALLILSVFVPLKMGSAWFWIGAVIYVAAFAGFIKAFHDYAAAPADKAAQGGIYRLSR NPMYFFYFLGMAGVCVASASPWLLIVIVPFAIYNHLVVLGEERYCEQAYGREYLEYKRKT PRYFLFF >gi|257442819|gb|ACYG01000019.1| GENE 241 280413 - 281801 1375 462 aa, chain - ## HITS:1 COG:Cj0946 KEGG:ns NR:ns ## COG: Cj0946 COG0791 # Protein_GI_number: 15792275 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Campylobacter jejuni # 1 439 1 432 448 270 34.0 4e-72 MKRLVSLIFAALILVGCGETVGPRKFIPENPAILDLEYAQNSERLPAPASVQNISGKAFK SRYFKIWFDDAPIKAEIDTFWGLNYAKGRHFDAAGRIYDDAVYQSIRANANEEAFGLISA PAITVKNALLRNIPSDLPIFGDPSEPGEGAPFDYAANSAVSVGYPLLLSHYSRDGAWAFV RNDGVWSWIRSDAIKRISPQQADIYANSKFITILRDGAAVYDENGAELFRARTGTILPYD FSGERDLGGMLGVRSVFGGEILTQFGSRRYFVSAEDARLWPAPLDEQNSKIVAASLLGQK YGWGGYKFLRDCSLMTKDFLANFGLWLPRNSKAQSGRGERFSLAGMSADEKLSFIGENGV AYKTLLYMPGHVMLYVGQVDGKPAVLHDIWGLRTMDGGRAVIGRTAITSLTIGSDRADIA EDRLLISRISAMSVLSGEEDGVLDDRFTPEDPSSLSAYASGN >gi|257442819|gb|ACYG01000019.1| GENE 242 281858 - 283198 1337 446 aa, chain + ## HITS:1 COG:Cj0945c KEGG:ns NR:ns ## COG: Cj0945c COG0507 # Protein_GI_number: 15792274 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Campylobacter jejuni # 1 444 1 444 447 310 41.0 3e-84 MINFIIKKLKDRNIFITGGAGVGKSYVIKELIEDYRARGKLVIVLGSTGISAVEIGGVTV HSFFRFGICKNHEELKSFDRKQSGKLSELRKILALADLIVIDEISMIGAELFEMIYLRIS SSKFNGRLLVTGDFYQLPPVRKEGESATRASLFSDSDYAFGSYAWRQCEFFYVEMIGSKR TADAALYRLLCELRLGTPSEQTAELMRSLLIDAARAEPNATIISGRNAEVDAINNARLAK LNTPQSSFEGVYEALQSGVSEQKIQKWIASLNAPQSLTLKEGAKVLFTANKSGEFFNGEQ GVVEKIEKDSGGEIESVVVKKPSGMLSRVGLQTYELSEIAASGADAEQIVLARYYQFPLK LAYAITIHKSQGMSIPQLICDIDRIFAKGQLYVALSRATSLAGLDVIYTRSEPLLRYLQR SASADEAVVKFYQENEFYKISDQKVE >gi|257442819|gb|ACYG01000019.1| GENE 243 284072 - 284746 580 224 aa, chain - ## HITS:1 COG:CAC1491 KEGG:ns NR:ns ## COG: CAC1491 COG4185 # Protein_GI_number: 15894770 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 157 1 157 187 121 40.0 1e-27 MKNLYIFAGVNGAGKSTFYINQLESDYFYGTRINSDEIVKEFGDWKNKKDQNRAGKIALK LRESYLRRGIDFNVETTLSGRGIVRFISAAKASGYRITLFYVGLESVDLSKQRVAIRAQK NGHSIEEAILERRYSQSFDNLAKVIPFCEEIYFYDNSREILNEEDQKFSNLRLIAKKENG QIITLGKVSWLEDVIKNASEDYPAAKEFQKEGRAYTNKKFQEKE >gi|257442819|gb|ACYG01000019.1| GENE 244 284743 - 285444 724 233 aa, chain - ## HITS:1 COG:no KEGG:DEFDS_2016 NR:ns ## KEGG: DEFDS_2016 # Name: not_defined # Def: hypothetical protein # Organism: D.desulfuricans_SSM1 # Pathway: not_defined # 3 219 5 224 233 79 33.0 8e-14 MELKKYYDKLYLAQDKILNLLAKSSCYLYLTGGTALHRFVLDGTRYSDDIDLFTGAKDVS AKDEMVKLVRFLKQSGVVFDIAVDSSNFKRLIVKDAGVDLKIDIVYDVTEHIGDFDRKHG FLVDNIENILVNKYDFALSREQSRDIFDIYTIIKNSDVDLLKSMKNLSKKSASEPETICA RIKSFPKEMIEAKDIRAKSDAVLQDFMDNYKATFDKFFNLRKALNFAFKGQGL >gi|257442819|gb|ACYG01000019.1| GENE 245 285435 - 285767 368 110 aa, chain - ## HITS:1 COG:no KEGG:JJD26997_0948 NR:ns ## KEGG: JJD26997_0948 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_doylei # Pathway: not_defined # 5 97 2 95 110 67 45.0 2e-10 MQLNKYEQITIAKNILKTCYWGNTNYTPEYIVENIHNKFFARKIFSAILENSKFMTMDLA IMDERFVVEFLKDWQNKPINFNKERTRLRLDALINAYIDSSYQLRDMRWN >gi|257442819|gb|ACYG01000019.1| GENE 246 285804 - 286079 325 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459770|ref|ZP_05624879.1| ## NR: gi|257459770|ref|ZP_05624879.1| hypothetical protein CAMGR0001_1086 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1086 [Campylobacter gracilis RM3268] # 27 91 1 65 65 94 98.0 2e-18 MQTQEFVKFELNIPKERQDLIDVAKLLFEKVKDFKRLDNINVTNNNEEVLSDDIENNERI KEFKQLFSGFAVKEIPKKEDLDYIRIKRCVK >gi|257442819|gb|ACYG01000019.1| GENE 247 286502 - 286819 337 105 aa, chain - ## HITS:1 COG:no KEGG:CJJ81176_pTet0026 NR:ns ## KEGG: CJJ81176_pTet0026 # Name: not_defined # Def: cpp29 # Organism: C.jejuni_81-176 # Pathway: not_defined # 1 92 5 95 107 74 40.0 1e-12 MLGTKIVMDEAKIIREGRCDLARVYQIIDKFAQECNLVKKDKFTYLCKEDDEQDLPHLGK FTHAFLLNQKFFRDNVKEWKWLDGEDGEKNLIDRIQEFEREGYFK >gi|257442819|gb|ACYG01000019.1| GENE 248 286937 - 287815 992 292 aa, chain - ## HITS:1 COG:AGpA698 KEGG:ns NR:ns ## COG: AGpA698 COG0115 # Protein_GI_number: 16119702 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 282 5 281 290 235 43.0 7e-62 MFEISGMSGDEIVYINGKFCKAKEAAISPFDRGFVLGDGIYEVAPVVNSKICDRADFWER FERSAAQIELKIPYSREKYEEILYELIARNGVSEGAFYTQITRGAAMRDFDYVRGIEPSV FAFVYHTQIFDNPLAKEGIEIVSLPEIRWHRRDIKSISLLAQCILKHEAHKAGAYECFLI EDGLVTECSSSSAFIIKDDVLITRPLSNDILPGIRRKVILGLAEQAGLSVQQRAFGMSEV YEADEAFISAATLMVLPIVKADGRAIGGGTVGKYVPRLREMYAARLRAEAGL >gi|257442819|gb|ACYG01000019.1| GENE 249 287899 - 288402 555 167 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1084 NR:ns ## KEGG: CHAB381_1084 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 162 3 161 163 197 67.0 1e-49 MDKSNFKDRLLEIMFHVSHKPVLFRDLLEANAEFNDGMLVDPSKLNFKFKYGKSYVIFAC FAFVCVMFLITLTHAMFEKIDFHFSILFTIIATSAVFIGFDCFKAWARKKLTHELIKRAW ANHFLYFPYEKYSRIVENIYNEALKNDVPRRELEQYVLSKIVEVGEK >gi|257442819|gb|ACYG01000019.1| GENE 250 288816 - 289625 634 269 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 19 251 31 263 279 147 37.0 2e-35 MKLLFCIIFTLCSGVFAGSLEQIRSAGVVKIGVRDGRPPFSDEKSGNFEGFEINLADAIA KSIFGDKRGRVEFVPLNASDRISALQNDKVDLAVATITITQDRKRQIDFSYPYFSMSLGV LTRKSDGIKSIDDLSNKKVLVEGNGTTAENFLYKNKIHNLIHCSITTECYDMLKQGKADA YVNDNLIVLAYSIIDDNLEVAIQNLGNPEFLGIGVRKGNTELLDLINKELVALSKQGFFE RSYDETFKPFYQGAADKKYFLLDGLYAIF >gi|257442819|gb|ACYG01000019.1| GENE 251 289720 - 290526 907 268 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 17 250 30 263 279 131 33.0 1e-30 MKLLFIAALFCAALFADSLDQIRQNGVIRIGVRDAHPPLCESNGGKFEGFEIDLANAIAK EIFGKKEGKIEFIPLSVNDRIPFLEANKLDLVIGLFSITNERKRKIDFSLPYLSVNLGVL TRKADAFTDIAQLHDKKIVFEGDATVAERFFKNKGFKNLGHCASAKECYEMIRNGDADGY INDNLIVLAYSVIDDTLEVPFKNLGPSDFIGIGVQKDNKELLDFVNAELIKLSKEGFFKK AYEQSFDPFYRGTADKKYFLLDGIYNML >gi|257442819|gb|ACYG01000019.1| GENE 252 290628 - 291431 847 267 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 2 249 3 263 279 158 35.0 8e-39 MKLLLAMLLPFIVAFADSLEQIRSKGVVRIGVYDGQPPFSELNDGTFEGFEVTMAQAIAN DLFGEKGGRIELVPMKVEDRIPALVNNRVDIVIATITITPERAQQIDFSTPYFSVNLGVL TRKADRIKSLADLREKRILLESGGTGEAFFKQEGFGNFTFCKIARECYRMLKDGDVDAYA TDNLIAMAYPVVDSEVEVPLKTLGKPDFMGIGVQKGNKELLDFVNAELIKLSKEGFFEKA YEGTFNPFYHGAADKRYFLLDGIYSFL >gi|257442819|gb|ACYG01000019.1| GENE 253 291927 - 295548 4241 1207 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459780|ref|ZP_05624889.1| ## NR: gi|257459780|ref|ZP_05624889.1| outer membrane autotransporter barrel domain protein [Campylobacter gracilis RM3268] outer membrane autotransporter barrel domain protein [Campylobacter gracilis RM3268] # 1 1207 1 1207 1208 1656 100.0 0 MKKSICSSMLSLAAVLALAPAQALCNSDSNPPLIHTHNNLYSAGFSGNTSGSGSTSPNGN ITTITGVASGGTDYSGSVIYGGGSGDGIAGFTELNSASNNRLTIRGTNAYVGIAIGAEAK GVSDNYVSLENGSKVNLVVGGQGIAASKTGNEGEATRNQVFVKYGAEITGNADNFGGSSN RHYNIIGGRSGADKRASSNAVTIDGGTIGNSSVTNVIVGGIVSGGGDALSNRITIKGGTF RGGFDIFGAQSSTGKSSSNSVNITVPYYGSTNTITLNGSGRIWGAAGGSGNSSANSVSIN ARLKAQNYQVVGGQANSASAMSANRVEINNDDAIVGSVTGSLGGASSSRSVVDILKGTVK DDVAAANGIAGESDGDRVTLGAFDSNKGVHIGGNVYGARAGSVKNAVVYINKERTTIAGD VFAGYATSGSVENSNVNFRGGTINGTIYGSNKPTDKTNTLHIENWVGGGVKKAKDIKNFG SINFHDLYSTTEADAPLTLTTGGNTNLNGTKIEGIKSDLGEGKYYLIHNSGGGTITRAAQ TVQDNQIYTITDKDHYQITGTTIEVENNKNLIMQKGTLTRSWIDPNFDQSELMQNQNSNK AAGATELFGNKGNTVIVKEAAGNLGGKNISSGRDDATDGSNSIHDNHAKIKGGSSIGEID GGYSNSATPQEIYNNHVTFEASGIDVGYVNAGITHSSSGGGNVHDNSVTTNATIIRNSIY GGNTSNGEAKSNIVTINNGSVGAMAVGGKGNSAISNTITLNSVNVGGSVYGGKASGTASS NTVNLNGNTQVAGNVYAAEAASGSDNVVNFRGGSVAGTIYGVSSANASNSGNSLNILSSN SGNGLNAGNFANFNKLEFNLASLSEIENDTSSSTKRALNLTGPGNTDLSGTDIFVNSASE FNALNNASYPDGDNKKYTLAYKSGGGKFTGYDPRFKDKGYVTQLNKNYVIKDANTFSRNI GGMHISEDERELYIQKLIKTNESINGDFDADELRKYLGAGGLNGNNIDIGKAGEDKNFNA RNIHAAGANNTLNFISGHNVGVISANGNGNTLNIGASNSSPAAVNSLSAKNISGFDRLNF FLPSSIRAGDSVLTLSDPTANTDLSNVSNITAYISGVSGPLSPSSEIHLINKQGSGSLIA PNAANMHATLNVGVSLSYSPKIYQSGNYLNLGFDASSAPSARVNYNTKSFAETRAASLAS LKSGSEL Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:09:43 2011 Seq name: gi|257442817|gb|ACYG01000020.1| Campylobacter gracilis RM3268 contig00024, whole genome shotgun sequence Length of sequence - 788 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 776 765 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase Predicted protein(s) >gi|257442817|gb|ACYG01000020.1| GENE 1 2 - 776 765 258 aa, chain - ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 4 257 6 260 286 322 58.0 4e-88 MQYLTLNDGNKMPILGFGVFQVDPKETQRCVEDAISVGYRLIDTAQAYFNEESVGAAIKT ALAGGLKREELFITTKLWINDTGEERALKAFDASMKKLGLEYLDLYLIHQPYGDIYGSWR AMKRLRDEGRIRSIGVSNFYADRIVDLCENSGVIPAVNQLECHPFYQREALKRVLDGYGI AFESWASFAEGKNDIFKNAVLSGIGEKYGKSSAQVILRWLIQRGIIVIPKSVKIERMKQN FDIFDFALAPDDMAAIAA Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:09:49 2011 Seq name: gi|257442799|gb|ACYG01000021.1| Campylobacter gracilis RM3268 contig00012, whole genome shotgun sequence Length of sequence - 15706 bp Number of predicted genes - 16, with homology - 16 Number of transcription units - 9, operones - 3 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 195 131 ## gi|257459784|ref|ZP_05624891.1| hypothetical protein CAMGR0001_1709 - Prom 251 - 310 4.4 - Term 657 - 695 -0.8 2 2 Tu 1 . - CDS 783 - 1349 616 ## COG2202 FOG: PAS/PAC domain - Prom 1374 - 1433 8.5 + Prom 1375 - 1434 8.8 3 3 Op 1 1/0.250 + CDS 1563 - 2726 1051 ## COG0477 Permeases of the major facilitator superfamily + Prom 2740 - 2799 2.9 4 3 Op 2 16/0.000 + CDS 2824 - 5088 2823 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 5 3 Op 3 8/0.000 + CDS 5100 - 5666 535 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 6 3 Op 4 . + CDS 5659 - 6630 1117 ## COG3301 Formate-dependent nitrite reductase, membrane component 7 3 Op 5 40/0.000 + CDS 6657 - 7310 683 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 8 3 Op 6 . + CDS 7303 - 8421 1232 ## COG0642 Signal transduction histidine kinase 9 4 Tu 1 . - CDS 8512 - 9336 706 ## gi|257459792|ref|ZP_05624899.1| hypothetical protein CAMGR0001_1717 - Prom 9388 - 9447 2.7 - Term 9394 - 9430 -0.7 10 5 Op 1 . - CDS 9462 - 10280 762 ## CCV52592_1919 putative methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 11 5 Op 2 . - CDS 10277 - 10648 577 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 10720 - 10779 7.5 + Prom 10678 - 10737 8.6 12 6 Tu 1 . + CDS 10811 - 12019 1075 ## COG0477 Permeases of the major facilitator superfamily + Term 12055 - 12101 3.1 13 7 Tu 1 . - CDS 12249 - 12857 435 ## COG1739 Uncharacterized conserved protein - Prom 12883 - 12942 5.4 + Prom 12845 - 12904 5.0 14 8 Op 1 1/0.250 + CDS 12928 - 13764 1179 ## COG1210 UDP-glucose pyrophosphorylase 15 8 Op 2 . + CDS 13751 - 15013 1284 ## COG0166 Glucose-6-phosphate isomerase + Term 15127 - 15177 6.1 + Prom 15066 - 15125 6.2 16 9 Tu 1 . + CDS 15276 - 15674 316 ## PROTEIN SUPPORTED gi|160886338|ref|ZP_02067341.1| hypothetical protein BACOVA_04348 Predicted protein(s) >gi|257442799|gb|ACYG01000021.1| GENE 1 3 - 195 131 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459784|ref|ZP_05624891.1| ## NR: gi|257459784|ref|ZP_05624891.1| hypothetical protein CAMGR0001_1709 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1709 [Campylobacter gracilis RM3268] # 1 64 1 64 65 84 100.0 3e-15 MDQSRLEELRKLLNNQHSDAKQNLTEGLYPKNFNAFDFKNLKLEDASSKTLNSDDTAINK SSEV >gi|257442799|gb|ACYG01000021.1| GENE 2 783 - 1349 616 188 aa, chain - ## HITS:1 COG:Cj1191c KEGG:ns NR:ns ## COG: Cj1191c COG2202 # Protein_GI_number: 15792515 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Campylobacter jejuni # 9 165 2 157 164 137 45.0 1e-32 MQRPTPINQEIKLDEKRYIVSKTDPKGIITFANPYFCMICGYSELELLGQPHNIIRHPDM PRIAFKLMWDTIQQGKDFTAVVKNLAKDGRFYWVITEFTSKKDPVTGQITEYTAFRKAPP RSAIETIEPIYRALLDAERNGGMQASQKALVDFLKSKGETYESWIAKVSGKSNPLTAMFF KAMKKLFS >gi|257442799|gb|ACYG01000021.1| GENE 3 1563 - 2726 1051 387 aa, chain + ## HITS:1 COG:CAC0458 KEGG:ns NR:ns ## COG: CAC0458 COG0477 # Protein_GI_number: 15893749 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 2 369 25 391 409 167 30.0 5e-41 MNLSLIGSWMQSVALPWLVLSITADAFKVSLVAAARFLPALLCTPFSGVLLDKFNRKKIL LLAQIGMAVTASIFAVMSFCELYSFGKILFCAFASGIFTSMDAPSRQSMVKDLIDSPRDL ANAIALNSMSFNVARIAGPALAGIVMALWGVGFCFLFNALSFLGIIVSLFFIKIPPSATT LSSRSGGVFASIGAGISYVLHKKILSELMIIVLIVATLVPNYNVTISALVKLSLGADERS FGYLMSALGVGAFCGALFVAVFDKLGIRKIRSCAIAMGVSLALTGAANSFTWAAAGLAVT GFLFVITNSSINSTVQMHVSNEFRGRVLSLYALFLIGSTPFGALISGFFTELLGARVALA ICGAISILLLLALFYGFKIQRRTHFIF >gi|257442799|gb|ACYG01000021.1| GENE 4 2824 - 5088 2823 754 aa, chain + ## HITS:1 COG:STM2065 KEGG:ns NR:ns ## COG: STM2065 COG0243 # Protein_GI_number: 16765395 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 753 3 757 758 540 36.0 1e-153 MNRRNFLKSTAAIGTLATLNLNLNASAVTGGTEKKVASVCEMCSSRCPIEVTVKNGRGAL IEGNHRFSNKTSVCARGGAGINQLYDDQRLIKPLIRVGERGEGKFKEASWDEALKICAQK LGEISQKYGPQSVVFTSKTGEHHTQMMNFACAYGSPNIYSHWSCCPVTYNIAVPHTFGTN MQRDYGDAKYIVNFGHNLFEGIDISKTKKLAKAASREDVKLLVLDPRFSVVASKADEWLP IKPGTDAAFLMALIHVWLRDNKYDKKFIEQYAVGLEELRQSVKDTTPLWQEGITGIKADK LERIANEIYAAAPAVIIDWGHKTTTAKAEYVRTRAIAIANALMGNVERKGGIYFSKDSKT FNALCKEDLFPTISNPDKEFKIPKTARIDGCGEEGSENFFVPRKHGVLMQIAPTILSEKP YPVKGWVSTRFNHLINVAGVDKSVEAIKKLDFVLAIDVYMSDFACLADVILPESTYLERD ESIQNKGGTAPGFVMRNKAVEPVGDTKCGYEIFRELARVMKIDKDYTWNNIDEYRMQQAK GNAELIANLIKNGYVSYKVPKLYYREPKLVAKFIDKYPAAAEFVDENGEMSSQMKFKTPS GKIELFAPKVEELFAGYGCLNTEGMDVFGGHKYCLMTGKTALHTNGHTQNVKILNDMMSE SPVWISPASAKAEGLKTGDIVKLKNKFGEQKAKIFVTQGIRDDCLFLYHGFGHVSPGLKR TNGIGTNQSVLLDPAAGPVVSTMVTNVGVDIVKI >gi|257442799|gb|ACYG01000021.1| GENE 5 5100 - 5666 535 188 aa, chain + ## HITS:1 COG:ECs5054 KEGG:ns NR:ns ## COG: ECs5054 COG0437 # Protein_GI_number: 15834308 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 6 184 39 219 223 171 49.0 6e-43 MKKLIMIHDENLCIGCQACSVACRNENGVPSGVYRLQVHGKTSGVFPNLKLDYSRASCVM CEDSPCVDVCPTGASFKTKDGVTLIDERLCVSCKYCILACPYDARFVDPVTHAIGKCTFC YTNRTSKGLQPACVSVCPTDALTFGDVNDVNSEVSKLLAKTSVEYPKAYLNTKPRLANIK NKKGGRYE >gi|257442799|gb|ACYG01000021.1| GENE 6 5659 - 6630 1117 323 aa, chain + ## HITS:1 COG:PM0026 KEGG:ns NR:ns ## COG: PM0026 COG3301 # Protein_GI_number: 15601891 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Pasteurella multocida # 10 319 6 316 319 168 39.0 1e-41 MNNMWGDMSQYSEIYWPWPIAIYLFLAGLSAGATMVALLVKWNRHESEQNSIWDAMIRAG AITAPLTICAGLLLLIFDLGKPLTFYLLLIKFNFGSVMSLGVLALLIYVPFSFVFALCVF GEEICKFKLLAFLRPIVNLLSSFAKASKLFERVLFILALCVGAYTGFLLSAVMKIPLWNT PVLPILFLLSGFSSGIAASILVGLLFFKGSLNKDSIKYLLVLDLRAILFEIPLLFILFVG MYFEGGTSALAAQQALTHEVYGKIFWIGVLGTGLIAPIIIAFTALKNHAYKPAFIVLNSF VVLCGVILLRYYIVYAGQICTGA >gi|257442799|gb|ACYG01000021.1| GENE 7 6657 - 7310 683 217 aa, chain + ## HITS:1 COG:Cj1223c KEGG:ns NR:ns ## COG: Cj1223c COG0745 # Protein_GI_number: 15792547 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 16 213 18 218 221 115 34.0 4e-26 MKILLLEDDFEYRSSVSEYLTELGYEVDECESGDAACDKIAANAYHLLILDIKVPEVSGE EVLRYARSLGLNTPVMMMTSLGDIDDLSQCYELGCNEYLKKPFHLAELKFRVSELMRKYF GDEKGAVKIADKFHYFANLKILKRADEEISLSAKEIKIIEFLLANIKRFVSVDELIADVW DGEAGSVDVRVHISNLRSKTSNDFILSSRGLGYKINA >gi|257442799|gb|ACYG01000021.1| GENE 8 7303 - 8421 1232 372 aa, chain + ## HITS:1 COG:Cj1222c KEGG:ns NR:ns ## COG: Cj1222c COG0642 # Protein_GI_number: 15792546 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 107 359 149 392 396 99 31.0 1e-20 MLKGFKFTLFSAIFIIGAFISESLYIIYLNSKIEESADVAELMQKSSEALAGAYPDLKDE LIYDYAILNANGEILRSNLSVQPPDFAFITLKFGGRVFFKRHFLHEGKLHFFVISKKISY AKIEFIAISTIFITIFVALIIALFNYKIIKNFYAQQSNLIKAFFNDAMHELKTPLGVALI NTEMLGLRDKHTARIKSALKQMVITYEDVEYFIKSGKMSFKSRRIDMSEFLGARINFIYL VAKSKNISLQSRIAPDVSVFMDETSLMRLIDNTLSNAIKYSRPGGKVIIALEKGVSIAVF SVQDFGIGIKDTSAIWERYSRENAALGGFGLGLNIIDKICKRYGIAKSVSSKPNEGSTFC YKIPLFKQKLLD >gi|257442799|gb|ACYG01000021.1| GENE 9 8512 - 9336 706 274 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459792|ref|ZP_05624899.1| ## NR: gi|257459792|ref|ZP_05624899.1| hypothetical protein CAMGR0001_1717 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1717 [Campylobacter gracilis RM3268] # 1 274 26 299 299 523 100.0 1e-147 MKFYKSAKFKALAAVLLLIIILCAAFIRIVPDYSTSRGFAVVSLPDYNKYKQGYCLKEDR ILPKEERFKRGILDLLKRRMLFQTLVTDKCYYVYGSETCNYGNREFAVKVGFYETDKFNN NDWLEVLSKEYEIQKRENQVAWPYRSIFVEKFQMKPVNIAEKLKINLDGRSAGFEEPIVE YGGLREYILYFDKSFILYDNFKFRDAVVKIYVGDTIKDLSEAKQHYDETIENGSREKKYY LKIDTCGNSDFEVYESNIEEIANRLVRESMFKGG >gi|257442799|gb|ACYG01000021.1| GENE 10 9462 - 10280 762 272 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1919 NR:ns ## KEGG: CCV52592_1919 # Name: not_defined # Def: putative methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor # Organism: C.curvus # Pathway: not_defined # 22 269 25 274 295 144 32.0 5e-33 MIGARSKKYLSLFALACCVATFAFYLRFKSEENEIKIKQQFDFSASLFEKIVDEEKLNAF AISLILSQNSDVVRCFESGKHGECMDVTKKYKDILSAVPFYTGVKIHFHTQSARSLARSW SDEFYNDDLSSFRHSLLQIRQSLLPKALVEMGRCGVFMRGISPVFSEGKFIGSAEIMLDF EHVIAQINRIGNDIFILVDKRFETDCFYDKIGVIKDFIVVNSAPDYDVLSILATLDFGAQ SFIKKDGHYFYVRAFSDENGTKLGYIILHREG >gi|257442799|gb|ACYG01000021.1| GENE 11 10277 - 10648 577 123 aa, chain - ## HITS:1 COG:Cj0419 KEGG:ns NR:ns ## COG: Cj0419 COG0537 # Protein_GI_number: 15791786 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Campylobacter jejuni # 1 118 1 119 120 135 58.0 2e-32 MIYEDEMIYVEREEHEVPWVKVFTKAKFKELSDCDEATLAHLWRAVLQCEKSLREFYAPD KINIASFANYVPRVHFHVQARFKNDSFFPESVWGKKMRNGKLDLPEFSEFAEVLAANLKM EFR >gi|257442799|gb|ACYG01000021.1| GENE 12 10811 - 12019 1075 402 aa, chain + ## HITS:1 COG:NMA0047 KEGG:ns NR:ns ## COG: NMA0047 COG0477 # Protein_GI_number: 15793078 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Neisseria meningitidis Z2491 # 5 396 12 402 405 348 52.0 1e-95 MKSVWIMILCAAAILMITMGIRMSLGLFMQPIMQANSLSIAQVSFAMATTQLVWGFSQPL SGILADKLGAYVVLFWGSVLLAISCTLVPLFSSESSLVLTMGFGLALGLGAGSFPILMSL MAKRLPFSIRSVASGVLNAGGSFGQFLFAPMIGFCIATPALGYGGAFFTLAGLSLLILPL ARLLAGGKILFGEQTSLHEEDKRSLGEVLRLALRDKSYILINLSFATCGFHVAFLVTHLP SEVALSGHGAQVASFSLALIGIANIVGSLFVGWCVCKVRCKVILFCIYALRIALIGAYVL SPKDSLTFYIFSVGLGFTWLATVPPTAAAVGKLLGTRYLASLFGFTMLSHQIGGFFGAYI GGLAVRAYGAYDYMWYLDMTLAAIAALLSLPVREAKMKHVKF >gi|257442799|gb|ACYG01000021.1| GENE 13 12249 - 12857 435 202 aa, chain - ## HITS:1 COG:Cj0429c KEGG:ns NR:ns ## COG: Cj0429c COG1739 # Protein_GI_number: 15791796 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 1 192 1 188 194 169 44.0 4e-42 MKTIEKEISAAQEIKKSSFIAYLAPLASFETLRAQLRQQHPKARHIVWAYRALGEPGQIV ENSSDDGEPKSTAGAPCLNALRGAELINAAVLVVRYFGGIKLGTGGLVRAYASSANLAIE AAASSGALTDFFLKRHCAFFVPFAAVAKFEHFLKKSGFVYEASFGAAGAEFSAEFSAEEF EKFKGFADALAPALKMLHEPEF >gi|257442799|gb|ACYG01000021.1| GENE 14 12928 - 13764 1179 278 aa, chain + ## HITS:1 COG:Cj1536c KEGG:ns NR:ns ## COG: Cj1536c COG1210 # Protein_GI_number: 15792844 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Campylobacter jejuni # 1 271 1 271 274 431 73.0 1e-121 MIQTCLFPAAGYGTRFLPATKSLPKEMLPILTKPLIHYGVDEALEAGMDNMAFVTGRGKR ALEDYFDRSYELEDQISGSSKEYLLDEIRALMKRCTFSFTRQEQMKGLGNAIYTGKILIR DEPFGVVLADDLCVNENGEGVLAQMVKIYEKYRCSVVAVMEVPPQDVNKYGIVAGKSISD DLIMVSDMIEKPEASEAPSSLAIIGRYILTPNIFDLIEQTAPGKNGEVQITDALLKQAQN GVVIAYKFKGTRFDCGSVKGYVEAIKYFYEREFGDGKK >gi|257442799|gb|ACYG01000021.1| GENE 15 13751 - 15013 1284 420 aa, chain + ## HITS:1 COG:Cj1535c KEGG:ns NR:ns ## COG: Cj1535c COG0166 # Protein_GI_number: 15792843 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Campylobacter jejuni # 1 415 1 404 406 365 46.0 1e-100 MVKNELFFPLAKDGALEEVAAKIRAEYESGEIGYYCLPQQGADEIAQAEEFFSARNYDAI VLIGIGGSSVGVRALYEMLRPRVRKSLRFEILDNLDGHSVNRALEGLNFARTIFIISSKS GGTIETISLFKVVLQRFGISNLKALAKNFIFITDAGSPLDIFAREHDACVINMPANVGGR FSVLSAVGLVPAVGLGLDASAMLCGAAAAKERYLDEILACDPAKIAENKILRKAHHYATH KSAKINVLFSYGDALRALDEWYVQLWAESLGKKIGFSREGLTPVGLVGSRDQHSFLQLIM DGVKDKTVTFLKLTDNGIADAVPGISLQGLEGCDFVNGMRLDEVLNLQCDATLQAVLNEG ISVDLIEVSRLCEQSVGELFYYFELLTSATGAILGVSTYDQPGVEVGKRILKSLVLKSRD >gi|257442799|gb|ACYG01000021.1| GENE 16 15276 - 15674 316 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160886338|ref|ZP_02067341.1| hypothetical protein BACOVA_04348 [Bacteroides ovatus ATCC 8483] # 1 122 1 121 125 126 47 1e-28 MKIAKIDHFVLVTDDLQKCVEFYERILGLEHVCEGGKHSLRFGSSKINIHTRAGEFAPFA ARPGTGSADFCLICEGQSTQQLKTELESKGAQIELGVVPRTGARGAMQSIYLRDPDGNLV ELGVYEGSDDSA Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:10:42 2011 Seq name: gi|257442653|gb|ACYG01000022.1| Campylobacter gracilis RM3268 contig00025, whole genome shotgun sequence Length of sequence - 119147 bp Number of predicted genes - 101, with homology - 99 Number of transcription units - 49, operones - 22 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 43 - 102 6.5 1 1 Tu 1 . + CDS 222 - 872 231 ## gi|257459803|ref|ZP_05624909.1| hypothetical protein CAMGR0001_2159 + Term 1110 - 1145 1.1 - Term 1439 - 1493 -0.6 2 2 Tu 1 . - CDS 1502 - 2029 196 ## PROTEIN SUPPORTED gi|157165338|ref|YP_001467536.1| 30S ribosomal protein S20 - Prom 2049 - 2108 2.4 + Prom 2024 - 2083 6.4 3 3 Tu 1 . + CDS 2127 - 5570 3569 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 5623 - 5664 1.7 - Term 6285 - 6324 8.2 4 4 Op 1 . - CDS 6339 - 6830 741 ## COG0716 Flavodoxins 5 4 Op 2 . - CDS 6842 - 8077 374 ## CHAB381_1271 hypothetical protein 6 4 Op 3 . - CDS 8070 - 8393 401 ## COG4378 Uncharacterized protein conserved in bacteria - Prom 8416 - 8475 8.6 - Term 8465 - 8503 5.1 7 5 Op 1 . - CDS 8512 - 9204 817 ## COG1794 Aspartate racemase - Term 9221 - 9261 8.1 8 5 Op 2 . - CDS 9284 - 12865 4284 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 12892 - 12951 8.2 9 6 Tu 1 . + CDS 13651 - 14820 1284 ## COG2814 Arabinose efflux permease 10 7 Op 1 1/0.200 - CDS 15253 - 15912 657 ## COG1802 Transcriptional regulators 11 7 Op 2 . - CDS 15975 - 16952 781 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 16977 - 17036 8.2 + Prom 16985 - 17044 7.0 12 8 Tu 1 . + CDS 17090 - 18364 822 ## CCV52592_1707 citrate transporter + Term 18372 - 18416 11.2 - Term 18363 - 18399 2.2 13 9 Op 1 11/0.000 - CDS 18475 - 19089 222 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 14 9 Op 2 . - CDS 19083 - 19982 255 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 15 9 Op 3 . - CDS 19975 - 20307 168 ## CCC13826_1005 hypothetical protein - Prom 20413 - 20472 1.9 16 10 Op 1 2/0.000 - CDS 20485 - 21231 1010 ## COG1691 NCAIR mutase (PurE)-related proteins 17 10 Op 2 1/0.200 - CDS 21218 - 22000 655 ## COG1606 ATP-utilizing enzymes of the PP-loop superfamily 18 10 Op 3 . - CDS 21972 - 23165 1131 ## COG1641 Uncharacterized conserved protein 19 10 Op 4 . - CDS 23216 - 24466 1521 ## COG3875 Uncharacterized conserved protein - Prom 24568 - 24627 5.3 - Term 24595 - 24631 7.0 20 11 Tu 1 . - CDS 24639 - 26306 1557 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 26373 - 26432 12.6 + Prom 26357 - 26416 8.2 21 12 Op 1 . + CDS 26601 - 27758 798 ## gi|257459830|ref|ZP_05624936.1| hypothetical protein CAMGR0001_2186 22 12 Op 2 . + CDS 27771 - 30362 2929 ## COG4263 Nitrous oxide reductase 23 12 Op 3 . + CDS 30405 - 31181 679 ## CCV52592_0008 hypothetical protein 24 12 Op 4 . + CDS 31178 - 32383 1378 ## COG3420 Nitrous oxidase accessory protein 25 12 Op 5 . + CDS 32380 - 33174 539 ## COG1145 Ferredoxin 26 12 Op 6 . + CDS 33171 - 33773 782 ## WS0921 hypothetical protein 27 12 Op 7 . + CDS 33770 - 34219 594 ## WS0922 hypothetical protein 28 12 Op 8 . + CDS 34223 - 35125 838 ## COG0348 Polyferredoxin 29 12 Op 9 . + CDS 35134 - 35772 191 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 30 12 Op 10 . + CDS 35756 - 36436 1042 ## SUN_2171 hypothetical protein + Term 36473 - 36512 2.9 + Prom 36967 - 37026 3.2 31 13 Op 1 . + CDS 37098 - 37925 1088 ## COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 32 13 Op 2 . + CDS 37976 - 38590 734 ## WS0927 hypothetical protein + Term 38737 - 38781 1.0 + Prom 38610 - 38669 8.5 33 14 Tu 1 . + CDS 38808 - 41528 2314 ## COG1151 6Fe-6S prismane cluster-containing protein + Term 41543 - 41584 8.2 + Prom 42301 - 42360 2.7 34 15 Op 1 35/0.000 + CDS 42389 - 43381 1171 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 35 15 Op 2 . + CDS 43374 - 44150 218 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 44223 - 44251 1.0 + Prom 44436 - 44495 7.0 36 16 Tu 1 . + CDS 44515 - 45954 1791 ## CCV52592_0802 hypothetical protein + Prom 46192 - 46251 4.6 37 17 Op 1 . + CDS 46406 - 47233 805 ## gi|257459854|ref|ZP_05624960.1| hypothetical protein CAMGR0001_2210 38 17 Op 2 . + CDS 47283 - 47432 83 ## 39 17 Op 3 . + CDS 47429 - 48190 474 ## gi|257459855|ref|ZP_05624961.1| hypothetical protein CAMGR0001_2211 + Term 48309 - 48359 6.1 40 18 Op 1 . - CDS 49180 - 49752 724 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold 41 18 Op 2 . - CDS 49812 - 50633 1207 ## COG2014 Uncharacterized conserved protein - Prom 50804 - 50863 7.8 + Prom 50794 - 50853 13.7 42 19 Tu 1 . + CDS 50875 - 54186 2558 ## COG1404 Subtilisin-like serine proteases + Term 54234 - 54269 -0.5 + Prom 54325 - 54384 3.7 43 20 Tu 1 . + CDS 54504 - 54752 64 ## gi|257459863|ref|ZP_05624969.1| hypothetical protein CAMGR0001_2219 44 21 Op 1 . - CDS 54808 - 55317 709 ## Sdel_0692 hypothetical protein 45 21 Op 2 . - CDS 55314 - 56267 1025 ## CCC13826_1882 hypothetical protein 46 21 Op 3 . - CDS 56264 - 56941 261 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 47 21 Op 4 . - CDS 56938 - 58047 1384 ## CCC13826_1880 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129) 48 21 Op 5 . - CDS 58037 - 58225 117 ## gi|257459868|ref|ZP_05624974.1| conserved hypothetical protein 49 21 Op 6 . - CDS 58222 - 59343 1505 ## COG4314 Predicted lipoprotein involved in nitrous oxide reduction 50 21 Op 7 . - CDS 59375 - 60208 881 ## COG0790 FOG: TPR repeat, SEL1 subfamily 51 21 Op 8 . - CDS 60219 - 62909 3185 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 52 21 Op 9 8/0.000 - CDS 62925 - 63896 799 ## COG3301 Formate-dependent nitrite reductase, membrane component 53 21 Op 10 . - CDS 63898 - 64605 746 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 54 21 Op 11 . - CDS 64634 - 65407 802 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 55 21 Op 12 . - CDS 65459 - 67534 1907 ## CCC13826_1871 tRNA synthetase, class II - Prom 67576 - 67635 4.6 56 22 Op 1 40/0.000 - CDS 67639 - 69075 1514 ## COG0642 Signal transduction histidine kinase 57 22 Op 2 . - CDS 69047 - 69736 826 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 69792 - 69851 9.0 - Term 70048 - 70074 -0.6 58 23 Tu 1 . - CDS 70084 - 70689 722 ## CCV52592_0992 hypothetical protein + Prom 70923 - 70982 5.3 59 24 Tu 1 . + CDS 71003 - 71221 314 ## gi|257459882|ref|ZP_05624988.1| hypothetical protein CAMGR0001_2238 + Prom 71319 - 71378 9.5 60 25 Tu 1 . + CDS 71542 - 71736 92 ## gi|257459883|ref|ZP_05624989.1| hypothetical protein CAMGR0001_2239 - Term 71974 - 72033 -0.7 61 26 Tu 1 . - CDS 72281 - 72697 543 ## ECUMN_0645 hypothetical protein - Prom 72924 - 72983 9.8 - Term 72936 - 72970 4.1 62 27 Op 1 . - CDS 73021 - 74421 1445 ## CCV52592_0434 hydroxylamine oxidase 63 27 Op 2 . - CDS 74432 - 74989 761 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 75051 - 75110 9.4 + Prom 75053 - 75112 9.3 64 28 Op 1 11/0.000 + CDS 75189 - 76034 1054 ## COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 65 28 Op 2 . + CDS 76045 - 76605 830 ## COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain + Term 76619 - 76661 6.7 + Prom 76757 - 76816 3.7 66 29 Tu 1 . + CDS 76983 - 78011 737 ## CHAB381_1736 putative galanin + Term 78147 - 78207 3.1 - Term 78182 - 78236 4.0 67 30 Tu 1 . - CDS 78382 - 79389 588 ## gi|257459893|ref|ZP_05624999.1| hypothetical protein CAMGR0001_2249 - Prom 79416 - 79475 5.7 68 31 Tu 1 . - CDS 79581 - 80810 835 ## gi|257459895|ref|ZP_05625001.1| hypothetical protein CAMGR0001_2251 69 32 Tu 1 . - CDS 80965 - 81684 1032 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 81708 - 81767 2.8 + Prom 81687 - 81746 4.0 70 33 Tu 1 . + CDS 81990 - 82757 745 ## CCC13826_0401 hypothetical protein + Term 82770 - 82810 8.4 - Term 83104 - 83154 2.7 71 34 Op 1 . - CDS 83284 - 83847 542 ## COG0164 Ribonuclease HII 72 34 Op 2 3/0.000 - CDS 83844 - 84269 328 ## COG1714 Predicted membrane protein/domain - Prom 84305 - 84364 3.2 73 34 Op 3 3/0.000 - CDS 84372 - 84983 547 ## COG0461 Orotate phosphoribosyltransferase 74 34 Op 4 3/0.000 - CDS 84987 - 85544 850 ## COG0233 Ribosome recycling factor - Prom 85565 - 85624 11.4 - Term 85587 - 85629 6.4 75 35 Op 1 1/0.200 - CDS 85646 - 86176 471 ## COG1314 Preprotein translocase subunit SecG - Prom 86201 - 86260 8.0 - Term 86231 - 86263 3.0 76 35 Op 2 . - CDS 86271 - 86966 920 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 87137 - 87196 5.3 + Prom 87016 - 87075 7.1 77 36 Op 1 1/0.200 + CDS 87098 - 87766 752 ## COG0288 Carbonic anhydrase 78 36 Op 2 . + CDS 87732 - 89801 2016 ## COG0668 Small-conductance mechanosensitive channel 79 36 Op 3 . + CDS 89838 - 90011 402 ## 80 36 Op 4 . + CDS 90011 - 90742 273 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent 81 37 Op 1 . - CDS 91638 - 93425 1609 ## COG1164 Oligoendopeptidase F 82 37 Op 2 1/0.200 - CDS 93434 - 94309 953 ## COG3069 C4-dicarboxylate transporter 83 37 Op 3 . - CDS 94257 - 94826 503 ## COG3069 C4-dicarboxylate transporter - Prom 94947 - 95006 6.2 - Term 96114 - 96172 3.1 84 38 Op 1 . - CDS 96214 - 97365 1380 ## COG2849 Uncharacterized protein conserved in bacteria 85 38 Op 2 . - CDS 97416 - 98834 661 ## MS0984 hypothetical protein - Prom 98872 - 98931 7.8 86 39 Tu 1 . - CDS 98933 - 99439 427 ## COG3663 G:T/U mismatch-specific DNA glycosylase 87 40 Op 1 1/0.200 - CDS 99781 - 100989 1482 ## COG0303 Molybdopterin biosynthesis enzyme 88 40 Op 2 . - CDS 100989 - 102287 1111 ## COG0477 Permeases of the major facilitator superfamily - Prom 102316 - 102375 6.1 + Prom 102314 - 102373 3.1 89 41 Tu 1 . + CDS 102393 - 103022 281 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein + Term 103201 - 103267 30.0 + TRNA 103097 - 103173 84.9 # Pro TGG 0 0 + TRNA 103179 - 103255 77.0 # His GTG 0 0 + TRNA 103262 - 103338 83.1 # Arg TCG 0 0 + TRNA 103354 - 103430 87.9 # Arg TCT 0 0 + TRNA 103480 - 103564 74.7 # Leu TAG 0 0 + TRNA 103579 - 103653 83.3 # Asn GTT 0 0 + Prom 103813 - 103872 12.9 90 42 Tu 1 . + CDS 103926 - 105254 1911 ## COG1151 6Fe-6S prismane cluster-containing protein - Term 105947 - 105994 5.2 91 43 Tu 1 . - CDS 106147 - 106977 1089 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Prom 106997 - 107056 7.7 + Prom 107022 - 107081 8.0 92 44 Tu 1 . + CDS 107155 - 108057 1147 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase + Term 108108 - 108144 -0.5 - Term 108408 - 108437 -0.9 93 45 Tu 1 . - CDS 108592 - 108801 198 ## gi|257459935|ref|ZP_05625041.1| conserved hypothetical protein - Prom 109017 - 109076 7.7 - Term 109197 - 109234 3.1 94 46 Tu 1 . - CDS 109249 - 111096 2887 ## CCC13826_0231 arylsulfotransferase - Prom 111195 - 111254 10.4 + Prom 111159 - 111218 8.5 95 47 Op 1 3/0.000 + CDS 111331 - 111987 924 ## COG0526 Thiol-disulfide isomerase and thioredoxins 96 47 Op 2 . + CDS 111996 - 112619 676 ## COG1495 Disulfide bond formation protein DsbB + Term 112621 - 112654 3.1 97 47 Op 3 40/0.000 + CDS 112659 - 114308 1660 ## COG0642 Signal transduction histidine kinase 98 47 Op 4 . + CDS 114310 - 115002 943 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 115028 - 115087 6.0 99 48 Op 1 . + CDS 115149 - 116102 635 ## CCV52592_2212 putative TonB dependent receptor 100 48 Op 2 . + CDS 116087 - 117640 1292 ## CCV52592_0932 putative TonB dependent receptor - Term 118057 - 118093 1.4 101 49 Tu 1 . - CDS 118163 - 118813 818 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 119025 - 119084 6.0 Predicted protein(s) >gi|257442653|gb|ACYG01000022.1| GENE 1 222 - 872 231 216 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459803|ref|ZP_05624909.1| ## NR: gi|257459803|ref|ZP_05624909.1| hypothetical protein CAMGR0001_2159 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2159 [Campylobacter gracilis RM3268] # 1 216 1 216 216 408 100.0 1e-112 MRYFKNLLSDLRSGRLALHPILLATTFCVIRISGLYLVSEKLQDYHDLDILEWFSICLLY DFTQCVCFVAIGAHFAFTAGRSNKNNQNTNDDNASNQALGLQRLAILRATLYSFIFIACV VGYLTADINYQKLNVLNYFLPAMLTSALIYLIAIQNFMPVAWFDINTANYAEIFSVLLRW ASVVLAIGLALIWPPALSSYFRYAYKKRLAEEMCEA >gi|257442653|gb|ACYG01000022.1| GENE 2 1502 - 2029 196 175 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165338|ref|YP_001467536.1| 30S ribosomal protein S20 [Campylobacter concisus 13826] # 5 158 7 158 179 80 31 5e-14 MKVRITNRDVDNLNKFMLLYSKKARKQRLISTYAIPFEFLLVGIIIDGLLKTAPIASIAS VVLGAAWLIFYPKFYRRMLRKHLDAAKLAQDSNIEMEFIAGEDEISFSKGEPRASEKFAA RSLNRIAAGGENFFLAFDRGFHIVLPKNAETDAAVQHLADLCGLQIEPVDLDVEI >gi|257442653|gb|ACYG01000022.1| GENE 3 2127 - 5570 3569 1147 aa, chain + ## HITS:1 COG:Cj0938c_3 KEGG:ns NR:ns ## COG: Cj0938c_3 COG0318 # Protein_GI_number: 15792267 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Campylobacter jejuni # 619 1147 2 547 547 417 41.0 1e-116 MKSLLKINGFLPFLAIMFINASVDLGHKITIQNVLVKSADSGALIALTSLVNLLILLPYV FLFSASGYLNDKFSRTRITRICAKLGVALTALITLGYLCGWFYFAFFMTILLAAQSAIYS PAKYGLIKKIVGAKNLGAANGLVQALTIIAILLSSLVFSVIFELFAARSSDAGELMSSVW FIGVLLVAGSALETYYSYKIPFFDAAQPQAEFNKDDYLKLRYLRQNLNFVLKDKNVLLCT LGLAMFWAVSQLVIATFPAHYKSLSGSDNVMVIQVILALSAIGIALGSIFAGSYCKKHIE LGIVPFGAFGLALALMVLANAHSVFWLGTASFFFGFSGGIFIVPLNAVIQFFTADERMGR VLAGSNFIQNIFMVLFLLIAIILVHFAVASGEIFVMAALCVLICGIFGAKYLPQLFVRIL LIPFMKFGYQVHVDGIENIPQKGGVLLLGNHISWIDWAVVQLACPRGVRFVMHRSYYDLW YLKWFFKIFRVIPIGAGVSKSAIESIREALNAGEVVGLFPEGHISYNGRIDEFQGGFELA AHDTNSVIVPFYIRGLWGSTFSRASEHYKRTISQSGKNALRVSFGAPIEANSKAHEVKRA VTELSFFSWGKYLASLKPLAYNWLNQAKRSPFKRVAVDSTGVSFTNLAMMSAVLILRKRL KSRISSEENVGIILPSSVIASAVNLTLFAMGKTSVNLNYTLSEENLIYCADKANIRTIIS SRKFVEKLKSKGFELESSIGDRLVYLEDLSEGVSKNERIACALKSLLMPKILFRALYFKP HAIDDVATILFSSGSEGKPKGVVLTHKNIMANVRQISELINATEHDAILASLPIFHCFGL TVTTLFPLNDGILSIHVPDPTDAFSVGKMSAKYGATIMFGTSTFFRLYTKNKRLNPLMLG SIRLAIAGAEKLNENVRKEFKIKFGIEIYEGYGTTETAPVVSVNTPNVLEPDFFKELYFN REKSVGLPLAGTVIKITDPASLQPLPNGQEGLILIGGHQVMKEYYDEPAKTAEAIAQING VRYYKSGDIGYIDDDGFLFITDRLSRFAKIGGEMISLGAVESAVGEILGESAIYSCVNLK DEKKGEKIALLYVGEASEDEISRRLKDSALAPIMQPSVVKKVEQIPVLGSGKVNLKAVKD LAIELGL >gi|257442653|gb|ACYG01000022.1| GENE 4 6339 - 6830 741 163 aa, chain - ## HITS:1 COG:Cj1382c KEGG:ns NR:ns ## COG: Cj1382c COG0716 # Protein_GI_number: 15792705 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Campylobacter jejuni # 2 162 3 162 163 184 63.0 6e-47 MVGIIFGSSMGNTEDAAKLISEKLGIENELKNVADIAPADLNKYTALIIGSSTWNDGELQ DDWAGFDFSALDVSGKTVAIFGMGDSSSYSDAYCNAMRELYDNFKKAGANIVGAVPTDGY EFDESKAVVDGKFVGLALDNDNQSDLTESRIEAWVAQIAPSFK >gi|257442653|gb|ACYG01000022.1| GENE 5 6842 - 8077 374 411 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1271 NR:ns ## KEGG: CHAB381_1271 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 174 410 5 234 238 108 34.0 6e-22 MIKILRNLNNAGKPKQAVKKSRTTPQSNAYDDETGKLNSKNSLNSSKFNATCFAHAESKK FSGKFKKFSIGKSGVLNHNVSKSCVAKSAQKDGANRNLTARAFYDTDLVQNNFFCAKRSA EKSALLRDTAASKRDIATRKKRQKADLRRDNELIDNEILNAEAFNKKFFCGEIFGFDANG REIVPEALRDYNAASRARAMLALYNFNVNADDRIPPANLKGASQFRAAFLNFIASELGRG ARKIYRFKPAVKFCAADNAIIFAYLRGMQLPIFAAKPAYKLTRAIVSLRSGLLLNGDDAF CNFVFCKIALRNAGAQLQLVGKSGELIVVRKSGFSLGVVTSFKKILPQNPAIYDNDIKKA LELCRGANLDAVYLVYPKNENFNRHVEIKSECFKGNFIMKLVPYKLTDKIY >gi|257442653|gb|ACYG01000022.1| GENE 6 8070 - 8393 401 107 aa, chain - ## HITS:1 COG:Cj1384c KEGG:ns NR:ns ## COG: Cj1384c COG4378 # Protein_GI_number: 15792707 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 101 1 101 104 174 87.0 3e-44 MNVLVIGADEITPIKAVLKDLGASNIEHWDARNENRVNRKPIPQDTECVVMLTSFLNHNT MKKIKGEVKKRKIPLVCAKRSVSCVFCEYCKVFNLNQEFGCRPCEDD >gi|257442653|gb|ACYG01000022.1| GENE 7 8512 - 9204 817 230 aa, chain - ## HITS:1 COG:STM3015 KEGG:ns NR:ns ## COG: STM3015 COG1794 # Protein_GI_number: 16766317 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Salmonella typhimurium LT2 # 1 229 1 230 235 244 54.0 7e-65 MKKIGLIGGMSYESTITYYDGINRKINERLGGLSSGEILLSSLNFDEIERCQRDNEWGRA GEILARHARVLQSGGADYIFLCTNTMHKCYEAINAAISVPFVHIADATLSELRKRGVQKV GLLGTIYTMTQDFYKQRLIDGGVEVLVPNADEMEAVNEIIFDELCFGKILPHSKEKFLQI IEGLRARGAQGVILGCTEIGLLVSQADTAAWLFDTTQIHIDAAVSLALSE >gi|257442653|gb|ACYG01000022.1| GENE 8 9284 - 12865 4284 1193 aa, chain - ## HITS:1 COG:Cj1476c_1 KEGG:ns NR:ns ## COG: Cj1476c_1 COG0674 # Protein_GI_number: 15792791 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Campylobacter jejuni # 1 410 1 410 410 709 83.0 0 MAKVMKTMDGNEAAAYVSYAFTEVAGIYPITPSSPMADYTDIWASQGKKNLFGMPVKVVE MQSEGGAAGTVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGQMLPGVIHVAARALAAQA LSIFGDHQDVYACRQSGFAMLASDSVQEVMDLGGIAHLAAIKGRVPFLHFFDGFRTSHEI QKIEVMDYAEFDRLLDREAVRKFRENALNSEHPKTRGTAQNDDVYFQTRELTNKFYDALP DIVAEYMSEISKITGRSYAPFVYYGASEPQRVIVAMGSVNQALEEVVDHLNAKGEKVGVL KVHLYRPFSLKYLFAAMPKSVKKIAVLDRTKEPGSLGEPLYLDIKAAFYGREDAPLIVGG RYGLSSKDVDPAQLIAVYENLKADEPRNGFTIGIDDDVTHLSLPVGDKISLGYEDETECL FYGLGADGTVGANKNSVKIIGDKTELYAQAYFAYDSKKSGGYTRSHLRFGKRPIRSTYLV SNPHFVACSVAAYLDIYDVIGGIREGGTFLLNSIWDAEQTAAKLPNKVKKILAVRRVKFY ILNATKLAREIGLGGRTNTIMQSAFFKLSGIIPFEQAQSYMKEYAKKTYAKKGEAVVAMN CDAIDRGADALVQVAIDPAWANLKDDAAGADDKYKGDEFIEKIVKPMNAARGDSLPVSAF LGHEDGGFDAGTTRFEKRGVGVVVPKWIEQNCIQCNQCAFVCPHAVIRAFLLDEKDEAAA PLNLKDHLLEAKGKELKGLKYKIQVSPLDCTGCALCAENCPSKEKSLVMVPLEEELAKGE QESADFLFEHVRYKDDLMDRSSVKGVGFARPFFEFHGACPGCGETPYITLITRLFGDHMI VANATGCSSIYGGSAPSMPYRKDENGRGVAWANSLFEDNAEFGLGMKIASETLRHKIEDL MLGSLSSVPNALKALYHDWIENRNDTLKSAQIRDRLVPLLEQNLDAPGVREILELKQYLN KKSQWIIGGDGWAYDIGYGGLDHVLATGEDVNVLVLDTEVYSNTGGQSSKASRRGSIAQF TAGGKRVQKKDLGQIAMTYGNIFVAQVNSNANQAATLKAIMAAEAYPGPSLIIAYSPCIA HGIKGGMGSSGDQAELASKCGYWPTYTFDPRLAAEGKNPLKISSKEPDWSLYEEFLLNEV RYNALKKIDPEHASKLYEANKADAMRRYRQLKRLANADFGDEVASTDAASENA >gi|257442653|gb|ACYG01000022.1| GENE 9 13651 - 14820 1284 389 aa, chain + ## HITS:1 COG:PM0949 KEGG:ns NR:ns ## COG: PM0949 COG2814 # Protein_GI_number: 15602814 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Pasteurella multocida # 8 385 12 389 404 342 55.0 6e-94 MNVHKIAYTRVIALAFAAFIFNTTEFIPVALLSDIAADFSMDVTSTGLIITIYAWAVSIL SLPLMLLTSKLERKRLLLRLFVLFTLSHVLAAIAWNFVVLVIARLGIAISHAIFWSITSS LVVRLAPINKGSQAIGMLALGTSLAMVLGLPLGRVVGELFGWRITFFAIGALAAAEALFL WKILPFLPSRRAGSLASLPMLARRPMLLALYLLTFLIVGAHFTTYSYVEPFVAKFNPAGG HFVTYVLLAFGASGIAASVLFSKLYRPFPNAFLICSILFILASVLTLKVFVANDVALLLA AFVWGVGIFGFGLCLQIRVLALAPDATDVAISIYSAIYNVGIGGGALLGHQIATRFGLEH IGEAGAILGALGLASYLYVSAKFAQTNSA >gi|257442653|gb|ACYG01000022.1| GENE 10 15253 - 15912 657 219 aa, chain - ## HITS:1 COG:BMEI0106 KEGG:ns NR:ns ## COG: BMEI0106 COG1802 # Protein_GI_number: 17986390 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 7 217 12 222 227 139 34.0 5e-33 MIHLNSDRPITTTEFIVHSLSQDILNGNIKSGSKLKQNEISKRFNVSATPVREALKILTA KGLISFDPFKGAIVKGLCYKEAKEIYELRILLESKLITDAFEKYDTEYLQKAINIQEQIE TCTDLNEWALLNANFHRCFWQSESGSRTFNIVETLIMAAIPYVSLSLFYKKTHIKSSNEE HKAIIEAYQKKDLKKLVHLNTAHTNKTKNILEDAIKNSL >gi|257442653|gb|ACYG01000022.1| GENE 11 15975 - 16952 781 325 aa, chain - ## HITS:1 COG:BMEI0105 KEGG:ns NR:ns ## COG: BMEI0105 COG0252 # Protein_GI_number: 17986389 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Brucella melitensis # 6 306 12 316 322 250 46.0 2e-66 MSKPKIAVGALGGTICMSANGGQGGVKPSFSAEQLVGAVPALREMVQIEAKTLLALPSGS LKVQDLVEVYKWAKEQIAKGAVGVVITQGTDTLEESAFFLNLVWDEHAPLVITGAMRNAD SISSDGAGNIYASVLTAISPQSRDRGVLVVLNDTIHSALWVHKSNTFSLQTFVSINAGIQ GLVIENGVKFITPAVSRQIYPLPDVKFPKVEIIQSYLGCEGEMIELALRANYSGIIISGV GAGHVSYDMVDKLRGAQIPVVVASRTGSGICATKTYGYKGSEMDLQSIGCIMSGWLSPIK ARLLLMLLLANNMNLEQIKKEFGNF >gi|257442653|gb|ACYG01000022.1| GENE 12 17090 - 18364 822 424 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1707 NR:ns ## KEGG: CCV52592_1707 # Name: not_defined # Def: citrate transporter # Organism: C.curvus # Pathway: not_defined # 1 423 1 425 425 577 85.0 1e-163 MLVAAQCVMIFTLILMISGKTPLYTTAIVGSAISALVAGFPVTGPKNVVSLASLIIGGLN PVIADMTGILMFIGVMQASGFMDVIIRSIVRLGNRLGGGVGVATAGGIAAAVIGMLTGFT QPAITAVITGTASVKLGVDPNKSAGIHGHAGILGNYGGFTHPTQVAVVAVSNIGFGLINV IGTFVGLCVFACAFFRLKRMRSGTTLSKEDIERISKEFEAKADEAPVWKAFLPFIVLFIG FIAGFPVFVVGIASAIITILLSVLNFQEGEKNMLEGVGKIATPLVATIGFLFMSGVIKQI GLADLIGQIFTPMLTHAPIQSMLIVSALAGFVTQSNAASVAITIPFLQAALSLGTATPLS LAVMAAGGSAMMQYYLTGGPVAALATVIPVIPGSELKAANKFQRPNMLFGLLVLFILSFI FSIF >gi|257442653|gb|ACYG01000022.1| GENE 13 18475 - 19089 222 204 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 177 311 485 508 90 31 1e-41 AMSKKILTTPIKAEDLADIKIGDVIYLSGHIVTCRDVPHRRVVQEGRELPLDIRGGAILH AGPIIRKTGDKSFEMVSVGPTTSMRMEKFEREFIAKTGVRLIVGKGGMGEGTMSGCKEFG AIHCVFPAGCAVVAATQVEQIESADWTELGMPETLWKCRVKEFGPLIVSIDAHGNNLFEQ NKVKFNEKKDAALAEILPQVGFIK >gi|257442653|gb|ACYG01000022.1| GENE 14 19083 - 19982 255 299 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 26 284 26 288 508 102 26 1e-41 MDKEKAVQKMTEVMAKFVGYTGKVLPDDVTAKLSELAERETQPLAREIYKTMFENQRLAK QLDRPSCQDTGVIQFFVRCGANFPLIGELEELLREAVLRATREAPLRHNSVETFDEYNTG KNVGKGTPSVFWEIVPQSSECEIHTYMAGGGCSLPGKATVLMPGMGYEGVVKFVMDIMTS YGINACPPLLVGVGVGTSIDVASLLSKKALMRPLGSRNPNDRAALTEKLLEEGINKIGLG PQGMSGTSSVMGVHIENCARHPSVIAVAVNVGCWSHRKGHIVWDAELNFDVKSHKEFAL >gi|257442653|gb|ACYG01000022.1| GENE 15 19975 - 20307 168 110 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1005 NR:ns ## KEGG: CCC13826_1005 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 103 11 113 416 120 53.0 1e-26 MAAEIYIAICVKGGFLRHYAGDILAVILLYALARAAFAAPPSNLALKIFAFAAALELAQY FGAVQILGIENKILKVMIGGTFDFADLLCYAAGCVLAGVYEKFEKRRSNG >gi|257442653|gb|ACYG01000022.1| GENE 16 20485 - 21231 1010 248 aa, chain - ## HITS:1 COG:CAC0776 KEGG:ns NR:ns ## COG: CAC0776 COG1691 # Protein_GI_number: 15894063 # Func_class: R General function prediction only # Function: NCAIR mutase (PurE)-related proteins # Organism: Clostridium acetobutylicum # 1 248 1 248 248 260 56.0 2e-69 MREDEILELFAGIKSGRVSEQEALKYLKNYPYEDVGCAKIDTQRALRNGAGEVIYGEGKT DDEILRIAGAIGARGQNILITRTNERVFGLVRETLPQAEFNARGRVISVKFKEPALTQSY IAIVSAGTADGAVVEEAYETARFLGNDVRKFSDAGVAGLHRLIANLEQIRGAKVVIAVAG MEGALASVLAGLVSVPVIAVPTSVGYGASFGGLAALLAMLNSCANGVSVVNIDNGFGAAY NASLINHL >gi|257442653|gb|ACYG01000022.1| GENE 17 21218 - 22000 655 260 aa, chain - ## HITS:1 COG:CAC0775 KEGG:ns NR:ns ## COG: CAC0775 COG1606 # Protein_GI_number: 15894062 # Func_class: R General function prediction only # Function: ATP-utilizing enzymes of the PP-loop superfamily # Organism: Clostridium acetobutylicum # 3 252 6 257 271 205 42.0 6e-53 MTKLEKLKADLRGLGELAVAFSGGVDSSLLLRAAHDALGARAIGITIRSPYMSSREIAEA VEFASIYGIRHEILELSVAERIKDNPENRCYLCKKAVFSRLIERARELGFSHVADGTNRD DLGEHRPGLKAKEELGVLSPLINLTKSEIRELSRELGLPTAEKPGYACLLTRLPHGRKID ESELNLIEAAENLLIASGYTNVRARCDRKNIKLQMPFSSMQSFLNDAKFKSIVRQLVSLG AADVTLDLKGLREDVLYERG >gi|257442653|gb|ACYG01000022.1| GENE 18 21972 - 23165 1131 397 aa, chain - ## HITS:1 COG:CAC0774 KEGG:ns NR:ns ## COG: CAC0774 COG1641 # Protein_GI_number: 15894061 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 387 16 416 420 288 41.0 2e-77 MNLAALVELGVDFDYLCAELEKLNLAGEFKLERKNVLKNGIAATKIDVVPLKSQPHARSY AGIRQILESSNLSRSCKQRAGAIFRTIAQAEAKVHGTEVERVHFHEIGAIDSIADVAGAA ICIEYLFEKLGVSRVVSSKIELGGGVALCDHGALSVPAPAVCEILKGVPVSLGRANFEMT TPTGAAILKACADEFTDGASFRIEKIGYGAGDKDAAGFANVLRAMICESHLSDESGESNL STQAGCSTVCKQILISTNIDDMDAESFALACEILRENGALDVFSRSIFMKKGRMGFELNA LCSKQDAQNLKDLIFTHTTAIGVREVEIAKIELKREFARVQTKFGEIGLKISGSGQTQKA KPEFDECKAAALAHDTTIERVRKEALKIYDETRKTKG >gi|257442653|gb|ACYG01000022.1| GENE 19 23216 - 24466 1521 416 aa, chain - ## HITS:1 COG:MA1313 KEGG:ns NR:ns ## COG: MA1313 COG3875 # Protein_GI_number: 20090175 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 2 414 56 463 468 238 35.0 1e-62 MQIPIAYGKDDHLNLEINEKNLLGVFDPNPVAKFDETALIAKALANPINQKSFDEFIAGE QKIVIIVNDGTRPTPTAKILKQIYPKIREKNKIFIIATGCHRQCSLDEYEMIFGKEIYAE IRAKNEVHDHDSKHDEMVFLGESKNGTQMYLNKIVAEAKKVIVIGSVEPHYFAGYTGGRK AFLPGTASYESITQNHKLALSSDAQALRLEGNPVHEDMIDAMKVLAHIDVFSIQTVLDSE HGVYYASAGDLNDSFYDCVKKADEVFCVNIPRKADIVISVAPYPMDVDLYQAQKALDNGK LALAQDGILIMVAKCRTGIGPKPFFDLMASADTPKKVLEKISAGFKLGYHKAAKMAEISL WAQTWAVSDLSDDEMRAVHLKPYHDIQKAVDDALAQKGADAKIIILPFGSMTVPKA >gi|257442653|gb|ACYG01000022.1| GENE 20 24639 - 26306 1557 555 aa, chain - ## HITS:1 COG:Cj0671 KEGG:ns NR:ns ## COG: Cj0671 COG2704 # Protein_GI_number: 15792025 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Campylobacter jejuni # 1 331 1 329 474 337 60.0 4e-92 MEFLTSLSESTQFFLQLIIVLGCLFYGAKKGGMALGILGGIGLVILVFGFRLEPGKPAVD VILTILAVVVASATLQATGGLDVMLQIAEKLLRKHPKMVCIIAPTVAWTLTILCGTGHTV YTLLPIIYDVAIKNGIRPERPMAASTISSQLAIIASPVSVAGVSMVAILLGQGVHIEGFS TYLDLLKLTIPSTFIGMLAIGTWSIFRGKDLDKDPEFQEKIKDPEQKKYIYGESTTLLGQ KLPRIKWICMWIFLATIALVAVLGYEKSLRPAWTKNVPGKSVEIIVDKKMVKNITIKDGQ VISMVDGGKVVSNVKESKAKDATKFNSVEIYDKDKKLTQSIVSQDGNVVITTGDKSESIA NASIVVKDTMKKTTNLNMVLTIQIFMLLAASIMMIASGIKAGNIAKNEIFHSGMIALVAI YGISWMAETMFTAHIEMLKASLGEVVKAYPWTYIIVSLLISKFLNSQAAAIATFVPLAVT IGIDPGLIIAFAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHSFIFPGLIGVLT ACGVGFVLAHLYGYL >gi|257442653|gb|ACYG01000022.1| GENE 21 26601 - 27758 798 385 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459830|ref|ZP_05624936.1| ## NR: gi|257459830|ref|ZP_05624936.1| hypothetical protein CAMGR0001_2186 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2186 [Campylobacter gracilis RM3268] # 1 385 1 385 385 721 100.0 0 MNFKKFCIAFLICLSQMAAADSFDLNATLRLGAFDASSHRLLLCGSGGELRMFDTAKWNV EFAQKYSDNEITALNFKNGKIYLAWGGAEIAVLNDRLKFLRTLKTGRSGTAQIDAIYAAK DAIYAVVDKNQLIRLDEYPDNSADGGYAPGENSTANGQSLNKNSAPDGLRGISFHYGRIN AVSLGANGLCVASWNGVACFSADLVATKFSGIDTAPNRAAQGELGSVKFKDAEFNSTRIV QGSEQNETKAGGAKSAEFQGLEFKGAKFQDEGLKTQSEISAEAGDKNLSGSIITALADCD GTLFAGDIEGNFINLKSGERKSVGSWIKSIVCARGTQFIATKDKIYENQKVGLKEVVDLK SEFLAMYADGEAILVVSKSGKILKF >gi|257442653|gb|ACYG01000022.1| GENE 22 27771 - 30362 2929 863 aa, chain + ## HITS:1 COG:PA3392 KEGG:ns NR:ns ## COG: PA3392 COG4263 # Protein_GI_number: 15598588 # Func_class: C Energy production and conversion # Function: Nitrous oxide reductase # Organism: Pseudomonas aeruginosa # 9 640 21 634 636 313 33.0 7e-85 MLKSFKPVLLGSVLFAASALCAADSDLERVMKERNLSEKDVLAAAKTYQPTGRKDDYMVF SSGGQSGQVIVYGVPSMRIYKYIGVFTPEPWQGYGFDEESKAVLRSGSINGKEINWGDTH HPNFSEKNGEYVGDYLFINDKANPRIAVINLSDFETTQIVVNPVIKSDHGGSFVTPNTEY VIETSQYAAPFDNDWHPIEEYQAVYRGAVTLWKFDYDKGKIDVNKSFSLELPPYMQDLSD AGKGESFGWAFTNSFNSEMYTGGIEKGLPPMEAGMSRNDTDYLHVYNWQILEKLAQDSKN YKVVNGHRIVTIDAAVKAGALFLIPEAKSPHGVDVSPDGRYIIIGGKLDTHASVYDFKKI KELIDKKEYAGKDPYGIPILDMQKTLHGQAELGLGPLHNTFDSQDGVIYTSLYVDSQIVK WNYKTLKVLDRINVHYNIGHLDSMEGKSSKPVGKYVIALDKLSIDRFNPIGPLHPQNHQL IDITGPKMEMLYDLPIGLGEPHDVVSIAASKLHTKPTYTMGTNSRTGKQHPAMTLAGQER IERDGKNVKVYATAIRSHINPEHIEVNKDDNVTIYMTNLERAEDETHGFTVDDYDLHMSL EPGKTASVNFIADKEGVFPFYCTEFCSALHLEMFGYLYVKDPNKKYTSAKASMLKALSPE ALKAEYDKVVATNKATDDVIQSVVKFLKEKNYEKYPKVKALVDDALDQYGKIPETKAKAD AAVKAGDMNGAILWEGQVWQYLVKTADVGLRAKNNLIRELSTPMSEAASNGEKAYLRGGC NGCHVIGQVSSGPDLTGVLLRHENGEKWVADFIKDPAKFYEDDYVKAMINYFNLRMPNQH MKDEEIKDIIEYLKWVDENAGLN >gi|257442653|gb|ACYG01000022.1| GENE 23 30405 - 31181 679 258 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0008 NR:ns ## KEGG: CCV52592_0008 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 255 1 250 251 331 63.0 2e-89 MPKYKIYAILALLIMTVAFTIPTLGFFKVQGKIVSGQVSSVSQLPAYSAPIWNFYTKASY KNHLIPSDVKNDLGAMLEHKFEVGVPSIPVWKISLEAPNYPKEAFPDGIPLYVHVDGFSG DVGEMNTLNHYIGMYPVWRGGTLEHSLSPYYLIIATIGMLAFLYYDGKGQTLLMILPIIA PLIFIGCYVGWLYWFGHNLQDWGAFKIKPFMPTAFGDGSVAHFTTHSYPALGFWLMLALS LLSALALLSKKKFLREHR >gi|257442653|gb|ACYG01000022.1| GENE 24 31178 - 32383 1378 401 aa, chain + ## HITS:1 COG:RSp1370 KEGG:ns NR:ns ## COG: RSp1370 COG3420 # Protein_GI_number: 17549589 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrous oxidase accessory protein # Organism: Ralstonia solanacearum # 4 400 14 409 423 186 32.0 6e-47 MRLLLLVISLALSLGAGELQDAIDSAKAGDIIELAAGEYHGNILIDKPLTIDGLDRSAVI IGDRNGTVIRVRSPHVTIKNLTIQNGGFEHLSEDAGINVSDVNGVIIKNNLIKDVLYGVV LSKANDVTIEGNEISSNTYRTSFKGDGIKLWYSNANKILNNDVHNVRDTVFYFSNGNLVA GNKGHSCRYSLHFMNSGHNVVEDNYYDGNSVGLFFMFSSDNIARRNVVRNADGAYGVGIG MKDSSNFRVTDNKVVYNARGFYLDQSPYQPGSLNVFENNDIEYNSIGVQFHATQLKSVFK NNKFKGNMEIVLNDTPESKLLQNEWSGNYFDDYDGFDRDGDGYGDVSYSSYAYADRLWAH KPSVRFFYGSSGIALLNFISKLAPFSEPELLLKDPKPRMRQ >gi|257442653|gb|ACYG01000022.1| GENE 25 32380 - 33174 539 264 aa, chain + ## HITS:1 COG:PM1595 KEGG:ns NR:ns ## COG: PM1595 COG1145 # Protein_GI_number: 15603460 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Pasteurella multocida # 56 254 33 210 250 102 32.0 9e-22 MTKNRREAIKLLGGALGTLGAVSLFADENSTNSAGSEAQNLNEQNSTGQNSAPNSIKQNS SGNSASLYLRPPGALAERGFRSSCIKCGQCVQVCPYHSIYLLDITHLFDIGTPVIDAKER GCYLCGALPCVLACPSGALSHETNEPKKVKMGIAVIKNLNACLAYRGQVLRPDDLRPKPA KTEQERELNSALAAKEGKLCDLCASLCPYPQPLDAIAMIEAGAHFAPQIRSACVGCGACA ELCPARIIEIIPRADYKSIYEGKQ >gi|257442653|gb|ACYG01000022.1| GENE 26 33171 - 33773 782 200 aa, chain + ## HITS:1 COG:no KEGG:WS0921 NR:ns ## KEGG: WS0921 # Name: not_defined # Def: hypothetical protein # Organism: W.succinogenes # Pathway: not_defined # 59 199 43 183 184 149 50.0 7e-35 MKNSIKFYLCSLAAALLLCGCGDDDDSSSAGQNSVSQNSVSSNSTPQSVEQNHTAKPRIS VKSGEAPKKDDKFVSYDFYGERKVNFNLNGDVNETTKNIVAYSSIKNQYEKLNFDLMKKR LGHDFILRCSACHDDYANGIIGPSLLDKTDAQIVDMIKKYKFKEKPNPLMVQLVNGMSEQ QIETMAKEIYEFNKQFKEQK >gi|257442653|gb|ACYG01000022.1| GENE 27 33770 - 34219 594 149 aa, chain + ## HITS:1 COG:no KEGG:WS0922 NR:ns ## KEGG: WS0922 # Name: not_defined # Def: hypothetical protein # Organism: W.succinogenes # Pathway: not_defined # 1 149 1 154 154 115 45.0 6e-25 MKPGKILALILGVALIALMIFMASSGGSGVPKQEQAKPQVQTKPAPQSKSVDLIDDKDVK NIKILQQSVKERDFEVSSSYLVSCAPCHGDDGRGKIAPPIGGKSKDQILASLKDYKAGKI KNSLMSGLLTNVSDESLDKLADEISKFKE >gi|257442653|gb|ACYG01000022.1| GENE 28 34223 - 35125 838 300 aa, chain + ## HITS:1 COG:HI0346 KEGG:ns NR:ns ## COG: HI0346 COG0348 # Protein_GI_number: 16272297 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Haemophilus influenzae # 55 296 47 282 287 148 35.0 2e-35 MDKYNSRCTIKNTSFFSTFALKNRSGKLRPSIRALRYATVFLVHLLFVLSFRADIQILEG DISGSRILGFHLADPFATLEVIAAHKDLPINLLIGSGTILLFYFIAGGKAFCSWICPYGA LSEIGEKLHNTLISKHVIKERSLPRGMRYAIWAVFLLLSAITDLLVFEIFNVVGILSRLI IYGFSLAGLWIVFVFLLEVFFSRRAWCAHLCPLGSTYSLAAKASLSKITWDKSRCDHCGV CQDVCFVSHVLDITKKKASENLGDKSKFMLKGIDCTLCGRCIDVCHQDALSIGNKLKDMI >gi|257442653|gb|ACYG01000022.1| GENE 29 35134 - 35772 191 212 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 208 1 219 245 78 28 2e-13 MIEIKNVSKKFADQFVLKDIDLNIDDGEQVLFVGQNGAGKSSLMRTILGEYIPTSGSVAI DGFDSFKQRSRALRGISFVPQTPPPLKLSLNELIYFAERTADASRADIVKFCDEMELDLG LNLNKPFHKLSGGMKQKFLIALAFGRASKAMIFDEPTANLDPSARERFKTLLHNHAKDKS LIFISHRLEEVGGLVKRMISMDLGRIVDDKNV >gi|257442653|gb|ACYG01000022.1| GENE 30 35756 - 36436 1042 226 aa, chain + ## HITS:1 COG:no KEGG:SUN_2171 NR:ns ## KEGG: SUN_2171 # Name: not_defined # Def: hypothetical protein # Organism: Sulfurovum_NBC37-1 # Pathway: not_defined # 5 139 6 142 157 101 42.0 3e-20 MTKMFKALLCALIALTFLGCGDEKDYGNVHYDRDVCEHCQMAISDNRFSVDVRVDGKNHY FDDIGCLVDFMVTNDKLNWLKDAKIYINDASGNGEFIDARTAHFYKGFKTPMSFGWGAFK NKQEGKQDFSFDQVVAALKAGGGSHGMGMGDMGRDAHGNMGSMHDHGDMGGMKDPHSAEH GMSEPKHDMGGGDAGSTAHPQGSPHDMGQMHEGNGTAHDMHSGHAH >gi|257442653|gb|ACYG01000022.1| GENE 31 37098 - 37925 1088 275 aa, chain + ## HITS:1 COG:SMa1185 KEGG:ns NR:ns ## COG: SMa1185 COG1277 # Protein_GI_number: 16263099 # Func_class: R General function prediction only # Function: ABC-type transport system involved in multi-copper enzyme maturation, permease component # Organism: Sinorhizobium meliloti # 1 217 1 223 275 58 26.0 9e-09 MKNLLTIAALDIKESFRSRWFLLYLLIFSGLVAAFFITGVTDSRVLGFSGLSRLLLLFIQ ICIIILPVFVLVTTSKAILADRDLNILEYLLSFPISQAQYYYGKALGRLFGVFVPIFLSL LLAIVWGAIKGTGIPWAICLLYTGLLFSLCAAFLGIAFLICAVSKSQEMGLGLAFFVWLF CLAFLDLVLIGLLAKTGVNENLIFAIALANPMEDFRIAAISLFDPDLAVIGTTAYFILDH FGRGLFIAFSLLYPIALGAASLILGYFIFRSKDLA >gi|257442653|gb|ACYG01000022.1| GENE 32 37976 - 38590 734 204 aa, chain + ## HITS:1 COG:no KEGG:WS0927 NR:ns ## KEGG: WS0927 # Name: not_defined # Def: hypothetical protein # Organism: W.succinogenes # Pathway: not_defined # 33 203 32 162 165 103 34.0 5e-21 MQNSAPQSSSSAQNLGASDKTGSDSAQNSKSVREPAWLKDVNLTCAKYGIDTSAHPEFRA YARLKDSSALAFASPKAMFAYFFESESSGANFNGASAEMNSENENSLGANSANKNPANGN LGEANSTDVNFGGAELYVTDYASGEILRAQDAFYVFGSVLQSARGDDLITFARLQDAQNF MREKKGHKILQFHEISAKLIDYLR >gi|257442653|gb|ACYG01000022.1| GENE 33 38808 - 41528 2314 906 aa, chain + ## HITS:1 COG:MA3282 KEGG:ns NR:ns ## COG: MA3282 COG1151 # Protein_GI_number: 20092097 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Methanosarcina acetivorans str.C2A # 282 904 6 626 628 369 35.0 1e-101 MANDKIAKQKGSRKKAATDENSAANTGENSVADAAKSSAASVFDKSTNIAQNSAANSTTS ASHARDKISKNRAAGENSCDECDCEARNSASGYDDSARSASGTNPAAHSSTQSAGNAKKS AINSTTNSMADSLTNSISNPAKSPSSKDHFSCSHEHSDNSAIHSHLHDEDLATHPHDQEE NLAAYLHEYGVNSAASSHECDENSAISSHEHDKHCHDHKPHSHRAIIGFDEHGIPKVLVP AEASPHTHKGAQGNLFEHFHEAEFTADYMKAVLEYKKTFPTKQEVLEKTPDPAVREMMLR MEQIGVDTAFDRFDKQMPMCSYGLTGVCCKICNMGPCKITKKADRGTCGADADLIVSRNL LRQVAAGVAQHGAHARELLLSLKWAAQGKLDLPIIGEYKIINTAKAFGIPTEGRELKEVA IELADTLLTDLSQSSGEYKTITALAPKERQEVWRKLDILPISAYNEVFEAYHRTGVGTDG DWRSVMQHLLRCGLAFTFTGVVAANIATDALFGVGDRVTSKSNMGALKKGWVNIAVHGHL PTLVSLIVEIGNSKEYQDKARAIGAQGIAFYGVCCSGLSAMYRNWGVVPLSNAVTAELVI GTGALDLWVADVQDVYPAIMDVANCFQTKVVTTSSSARLPGAEHIGYDHHHSNIAETRNL ARKILDRALQSHEKRKGLPVYIPPYEVEAEVGFSVEFVHKHYGGMEPLAHALKSGEILGI VNMVGCTNPKVPYERAIIDVAQTLIENNVLILTNGCASFPLMKLGFCQKSAYKKAGASLR AFLEKDELPPVWHVGECIDNTRSSGIFAGIAGVLGKNLYELPLAFTSPEWANEKGVDASL GFRLMGIDSYHCVEYQIHGSANVIHFFKEGTRRALGSVMHVDTDPVALALKMVSDMRLKR KALGWQ >gi|257442653|gb|ACYG01000022.1| GENE 34 42389 - 43381 1171 330 aa, chain + ## HITS:1 COG:MA1234 KEGG:ns NR:ns ## COG: MA1234 COG0609 # Protein_GI_number: 20090098 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 22 323 30 337 343 244 49.0 2e-64 MKNFKFMLLLLILATIATIAISLCIGRFGLSIAEVLKALSGGEVAQNVHNVVMDVRLPRI IAAVLVGAALGISGTAYQGVFKNQLVSPDLLGVSAGACVGAAIAILLDLNILLIQLFAFV FGLAAVCITLLITRALRSSATIMLVLAGIIVSGLMGALIGFLKFMADPETKLADIVYWQL GSLAKVDPSVLAMIAPVMGVCIAILVLMSYRINVLSMGDATAAKLGVNVVLERGIIIVCA TLLTASSVCISGIVAWVGLLMPHLTRMIVGVSNTKAIPASIFLSAIFVLIVDDVARSINQ SEIPLGVLTGFIGTLFFIFILLKNKRKLNG >gi|257442653|gb|ACYG01000022.1| GENE 35 43374 - 44150 218 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 226 245 88 26 1e-16 MVRVESLDFGYVKSAPLTLRDVNFNLEAGAMLTILGQNGAGKSTLLNLISGTLEPLRGKI SIDGKDMASLSAKGRAEIIGYVSQSEVCEYDYSVFEYVLMGRTAHIGIFSQPSENDYKFA QHYMKMLEIWHLKDKIITRLSGGQRQMASIARALCSEPKIVIFDEPTSALDFANQYKFLR ATKELLKNGYTVVLATHNPDFALLLGGYVALVKGGGEVAYGKAEQIIKSEILSKLYDLKL DVSYNEKVGRVCCLTYPF >gi|257442653|gb|ACYG01000022.1| GENE 36 44515 - 45954 1791 479 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0802 NR:ns ## KEGG: CCV52592_0802 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 479 1 473 473 388 46.0 1e-106 MKKIVLLSAAAALAVNLSAQENSLEIYANSAFLYQNFGAQKSNFSVNVPEYLDIRSIEIA GSCEVRELSLGEIEPVKNAEFAKKEADEKSLRELNDRLVALKAQQRFLSDFASLKDRSLA SLKADSQKIYDEVLLVAGEISKTDEQIGKLKEKISKYVIKNERSLNANFDCDPSFVKISY PVDVSAYTHNELSADLASGKIEVAQKLSVQNPLNAELANLTIALYPYEYSSQTAPQPFYP WYEGEPARPAPAAAYKKDVMLEEATMDRVAPAMEARSSYQRTGANIENSLSKVWKISGVS LKAGETGEFSFDKQSLDAKFDLLIDGYGSEAAYVRAKFSPERNIEESETLIKLDGVQIGL VHLGFAANAEATAYLGKNSLIEVKKEQANNFTKNSFFGGESKNSMAWDYEIKNGSKRAWN VVLQERAPVSTHEDVKVALKNSPEQSSLGKDGLLSWDFELKPGESKKIRFGYELSKPKK >gi|257442653|gb|ACYG01000022.1| GENE 37 46406 - 47233 805 275 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459854|ref|ZP_05624960.1| ## NR: gi|257459854|ref|ZP_05624960.1| hypothetical protein CAMGR0001_2210 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2210 [Campylobacter gracilis RM3268] # 1 275 1 275 275 510 100.0 1e-143 MKFRKLKFKILAAVLLFCALFVRIVPDYSTSQGFAVVTIFDYNKYKQGYCLKENRALSNE ELLQNAAINYFKRYHDYEVLRNTIIDEHDIKIFGHSFYTAHISKLYLIGDFNEENWFDFL VENTDRKSFDYEIKDKTQIDISDLSKYFVYKDEILGFKKPIILSEEKNPFHNGKMFLEKS FLIKENQFFVNYARPDYISWYIELNNKEDLTKIKSKENLMRIKNGYENLESFNEVLAYTH MKNLRRKFSYDNCGNINFDIKAPAEQELDMWIHGG >gi|257442653|gb|ACYG01000022.1| GENE 38 47283 - 47432 83 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKETDLRLELEGNYGADILSYYLWGKKTPPGPKELASNEWMDRKETI >gi|257442653|gb|ACYG01000022.1| GENE 39 47429 - 48190 474 253 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459855|ref|ZP_05624961.1| ## NR: gi|257459855|ref|ZP_05624961.1| hypothetical protein CAMGR0001_2211 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2211 [Campylobacter gracilis RM3268] # 1 253 1 253 253 478 100.0 1e-133 MKFYRSIKFKTLAGTLLLIIILCAAFIRIIPDYSTSRGFAVVSLSDYNKYKQGYCLKEDR ILPKEELYKRVAGAYLDYDVKLYWMIDAYRLKTFGSLWSSKYEVAYYELENINLSNCFEV LEKYYQEGKTTEEILMKELKAKKTDPKKYLKINLKDTSVGFDRPIVMVNGDDKAVTGTLF LDKFAIFNGNYMQFNHSEYIYDLVTNFDITREYYKERKNAVVGIGKGFKFDNCGNINYPL EEYYLGGRDIEMR >gi|257442653|gb|ACYG01000022.1| GENE 40 49180 - 49752 724 190 aa, chain - ## HITS:1 COG:BS_ydeN KEGG:ns NR:ns ## COG: BS_ydeN COG3545 # Protein_GI_number: 16077593 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Bacillus subtilis # 1 182 1 181 190 200 53.0 2e-51 MQKCVYIVHGYDASPKKHWFPWLKSEIEKSGARAEILAMPTPAHPRLDEWLKTLRESVKF EGEVYLVGHSLGCPTILNFLQSSAASGAVEGVVLVSGLAKPLSDPQFKILDEFMDKGFDF ERIKAAAKRRAVVAAKDDYIVPFSFSCELAGQIDAKFYEVQKGGHFLDRDGFTKLDLVYE ILEKMMKLKG >gi|257442653|gb|ACYG01000022.1| GENE 41 49812 - 50633 1207 273 aa, chain - ## HITS:1 COG:MA0321 KEGG:ns NR:ns ## COG: MA0321 COG2014 # Protein_GI_number: 20089219 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 4 255 44 282 308 95 27.0 7e-20 MSEILDQTLERAKEILGAEALDLKIERAVVGLFFSGVKLQGGACGLSYTPLKSLSGAVCC PSQASAMPDSGNIAGKSVRYLLRDLGSAAPLKKTLALAALNALGRACFDKISADYDVKFG ADPFEQLQIERGSFSVVVGALVPYIKTLMKKGADFKILELDKTTLKQAELPFYLPASEAA SVVPRADNVIITATTLINDTLDGLLHLKKSGAKLVLVGPTTPLLPQALFERGVDFAGGTL VRDADAVLDIIAQAGSGYHFLGKFADKITICKG >gi|257442653|gb|ACYG01000022.1| GENE 42 50875 - 54186 2558 1103 aa, chain + ## HITS:1 COG:PA3535_1 KEGG:ns NR:ns ## COG: PA3535_1 COG1404 # Protein_GI_number: 15598731 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Pseudomonas aeruginosa # 24 579 13 453 453 282 36.0 3e-75 MNYDLTSKFTNLHCKERLNLPTLSIAACLLLSGTCLGAYTETGMLGNTSSWESDEYKKDW GLTSMNASTAYALGFDGSGVKIGVMDSGVLLSHPEFGGGRIHIVKTIGNYDKDGMRYPDA AYGNGPINKNQPVKNGKKNFDTTDNGAFKKGEAFDIDGAWIRGVNDAHGTHVGGTMAANR DGSGMHGVAYGAQLYSANTGGNDNMTYGPNQDYNYFLKAYTALSDAGARVINNSWGSNRR VNSSFSGALGYKSTYGWRAVPEYGVEFYDVTVANQTTEAKDHINLKDIEEAKKAYYQFVT KDEKSFIDAAYEVAVKRQVIQVFTAGNRSLMAESFTRAALPYFRPDAEKYWVNVTGQAGG EGYPNDSSEYIRGYASASDIQEFNYAGHSKWWTIAAPAEEIYSAYVELTNDATYGNAIYK SSGGTSMAAPHVSGALGVIFQRYPYMNAAQVRDTMLTTARQTTLRAGHEGQPLERWGSDG LGVPSKVWGWGILDLGKAMFGPGQFLGNFDITMDQDDIWSNDISDKAIKFRKIEDQNEAA VWAARKAVLASKQNLSPEEKAELTFETAREKARAERAAQGYEGALIKRGSGTLTLTGDNT FTGITTIYGGKISALNQSIGKSKHIDVQNGGELEILHSAVYRVPERNGWRSVSKASDATT VKATINSGGAFIVNDGVNNLNLSFKQGSLLRAGQVNTSDLQNLVDNPGSKKILTATGTFS GANLANTQDSYAFFKTSKEEASGSNLRLSIQSGTSMQDFALSSSQRAFADLLVANRGSGI YTQILGSNHAQAREYYSAFANDAEFAAANNSAINSIMMASIVKNRGGANAVNIDKDTRFW IFSGTNRIKSDKDTGIGKLHSDSFVNLIGIDSLIGDSSSVGVFVGAGRTDDKISGTKEVK SKDFHSGIYSDIGFEPVKFSFGAIYSKYDRDRKLISSVSPIAYEYVGSNASSLSAFAQVS YMGFSNADSFSVEPYAGVSHTRTKIDSVSNSLIRIENKTRNLQAVSIGIKPSVPFRIGGV GLRASADVAYNRFFSDKQPQAYLYVNGLGGTQLKGEKLQNLTTAEAGIEASLSSRATLKL SYVGAYGSDIKSNGIGLRFRLEF >gi|257442653|gb|ACYG01000022.1| GENE 43 54504 - 54752 64 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459863|ref|ZP_05624969.1| ## NR: gi|257459863|ref|ZP_05624969.1| hypothetical protein CAMGR0001_2219 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2219 [Campylobacter gracilis RM3268] # 1 82 1 82 82 143 100.0 3e-33 MNTNGRELGQIRANLIIASERRLGREINLTKEAGVSKILIKGAGTGKIYAAAVSATSRAR CGVKFYFLPAARLNFISYPPKS >gi|257442653|gb|ACYG01000022.1| GENE 44 54808 - 55317 709 169 aa, chain - ## HITS:1 COG:no KEGG:Sdel_0692 NR:ns ## KEGG: Sdel_0692 # Name: not_defined # Def: hypothetical protein # Organism: S.deleyianum # Pathway: not_defined # 1 169 1 169 169 192 51.0 5e-48 MIKKIFAAVLLACVMGLLISSMDIAESKISVRHGNTDKQPLQIEFGKYLCHESGTVINDL YNTAQAVMPNGDTYFFNDIANVFMWLMRQKNKDEIVVWVYSQDTEKYIIAKDAWYSRVEI TPMGYGFGAYEFHNYGRSDYYYDEIVLCAARGETLLNPLINILLSENKI >gi|257442653|gb|ACYG01000022.1| GENE 45 55314 - 56267 1025 317 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1882 NR:ns ## KEGG: CCC13826_1882 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 317 1 317 317 349 67.0 8e-95 MSVFLSGSVIAFLAVELIVIALMTISQFYIVRIMRYWDFNATSNLQYALEKRNYLINTIL FFTIACKIILFIFFALCLNELSSIVPGAMCSAGVVGSNRYGNILLLLKILLIFGFGLWLI LNSLDLKAGKFPYLKRKYLIFTILFTGVLAEFILEILFFTNIPLRVPVFCCSVVFRAPKL PFGYTQALLATFFYAILGAILILNFLKQSMASFALNLLFLFVAYYAITYFFGLYVYEQPN HKCPYCMLLKDYYFVGYAIWGSLFLGIFFGIVPFLTELITKRAYTHLLKYSSFWLILNAL ICSAYVVKYYFVRGALL >gi|257442653|gb|ACYG01000022.1| GENE 46 56264 - 56941 261 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 223 17 217 245 105 29 1e-21 MSKIEIKQLYKIYNEGRANEFLALKNISLSVEEGQIVILKGVSGSGKSTLLSIIGALSKP SSGEVLVDGANVSKLADIESSAYRHKKIGFIFQSFNLLEALSVYKNVLAPLSLERLSRDE LGARIDEAMQIANIAHKKDQIVSSLSGGEKQRCAIARALVMNPQIILADEPTANLDKQNS LGFIEMLSKLKELKKTVLIATHDILFDELSFVDQRVFLKDGEISA >gi|257442653|gb|ACYG01000022.1| GENE 47 56938 - 58047 1384 369 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1880 NR:ns ## KEGG: CCC13826_1880 # Name: not_defined # Def: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129) # Organism: C.concisus # Pathway: not_defined # 1 369 1 369 369 468 65.0 1e-130 MISKSFIDYSVTLLRKDRADHSFSFAIFAFIVFILSSVLFISGSIQNDLEKVIKLRPDIV VEALRAGKRDLMHDGYIYDVSKIAGVSEVQGAVDGMYYFAQKRVWFHIVGDESLSENEMI VGEGVKAAMGEWYYEDEFHFLTEQRLIAIKINKISPHESSIVSNDVIYLNPATAREVLSL KEGEYTKLYVSVPNPNEVSEVALKIVNLYPNTQALSAEDAVAEVRHLYYYKGGIFMVLYA VAMISFFILLKNQISLAYGEKKKEIAILRSIGFCIKDIIAMKFIQNFIVSLSAYLLGVAG AYAYVFILDAPLLRDIFLGGELRNFITFTPAINFNMLFLIFVFSVIPFLAFVIIPSWRIA IGDMSEAVK >gi|257442653|gb|ACYG01000022.1| GENE 48 58037 - 58225 117 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459868|ref|ZP_05624974.1| ## NR: gi|257459868|ref|ZP_05624974.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 62 1 62 62 100 100.0 4e-20 MRLICALIIFFAALYALIAVHYVSFDRAKGEQCLQKIAREIKDVRLSSSFKSKAYAEFVY DK >gi|257442653|gb|ACYG01000022.1| GENE 49 58222 - 59343 1505 373 aa, chain - ## HITS:1 COG:PA3396 KEGG:ns NR:ns ## COG: PA3396 COG4314 # Protein_GI_number: 15598592 # Func_class: C Energy production and conversion # Function: Predicted lipoprotein involved in nitrous oxide reduction # Organism: Pseudomonas aeruginosa # 235 373 22 167 178 62 29.0 2e-09 MILRSFLVSAALVALVCGASMDGANKPAKPMFQSVDPSKATLVGSGEGKEYCAVCGMSLV KFYKTNHVWNGKQVASLHCLYEITGGKIPSDAQVVDTKNLNLIDVNKTFYVVGSKVKGTM TRNSKYAFSTEADAKEFQAENGGEIVNFAKAYEIAGQDFAGDNKMIKANREGGVYAHGKE FYETNCAKTEAKNFKAISELKAHLKNVCDAKGASKEPEYDKHLQAAALYLWDAPANLGSS GKDTKAKKPEKIVVPEGAKCPVCGMLVGKNPNWAAMIEIQGGENLYFDGVKDLMKYYFQK GKGFDKIFVTDYYKLHKIDAKSAFFVLGSNVLGPMGDELIPFESESAAKTFAKDHGGKML KFDEIKESVIEGL >gi|257442653|gb|ACYG01000022.1| GENE 50 59375 - 60208 881 277 aa, chain - ## HITS:1 COG:HP1098 KEGG:ns NR:ns ## COG: HP1098 COG0790 # Protein_GI_number: 15645712 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori 26695 # 2 272 7 286 290 161 40.0 1e-39 MKKFIIALILAAAANAGFISEGIQAQQSGDHKKLAEIYERACGLENKASGCYNLAVLYFE GTGNVEKNFEKAISLYEKACSAKFALACNNLGYIYESGNGADQNFTKAAAYYEKACKDNE GCTSLGLLYANGAGLAKDVAKAASLYEKACTYGDMMGCNNLGYLYLKGEGVQQSFAKAKI FYEKACGGDIGIGCNNLGYLYAFGQGVSQDYKQAKQQYEKACNLGHFDGCNNLAIMYAEG KGVKSDNAKAKELFKKSCDGGIKMGCENLEFLNSISK >gi|257442653|gb|ACYG01000022.1| GENE 51 60219 - 62909 3185 896 aa, chain - ## HITS:1 COG:Cj1013c_2 KEGG:ns NR:ns ## COG: Cj1013c_2 COG0755 # Protein_GI_number: 15792340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Campylobacter jejuni # 626 892 14 282 287 293 54.0 8e-79 MSALKILKFFISYKFALCLLFILAAGAGVATFLESIYDTQTAKILVYEARWYECVMGAAT LSLLGIIIKTKMWRRFGSFVLHAAFIIIFIGAALTRYFGTEGVLHVRAGESESEMVSVKP YLQIRTQDALFEHPLNLSQIGDNDFSFTQSINSKSFTVKFSSYKPAPKGEQGTLAVKAGF EGGSEQEAQLRGGAGWLGEPKILSFDGEEIMLSWGSKLIELPFAVKLLKFKLERYPGSQS PSSYASDVEILKEGKSAGEHEIYMNHPLNFDGFKLFQSSYDTDELGTVLELNRDPGKIPT YFGYFLLCVGFIGNLFTAGSRFKKLAKFIKNNAPAALLLIAPFFFGIELRAADENYLANL KANSRVHANGAFAELLVQDYMGRIKPLSTEASEIVNKISGTDSLYGLSAEQMILGMSLNP AFWRDQKIIKIKNDEIKKMLGLAPQERYASFNSVFDENGNYKLAHALDEANEKSASRRGV LDNELIKFDERLNIAYLTFRGVFFKFIPVPNDPQNAWLSPNDAFADYSIAPQIKGVLNDY LNGLQDGISDNDWAKADAALAELKNYQRVTSAAILPSVSRVKAEVFYNKASVFKKLVYFY MILGGVALILALLGALCGKSFALAQKILFAAFAICFAAHTLALALRWYVAAHVPWSDSYE SMIYIGWSAALAGIIFFRKSLLTLSASCLLASIVMLVAHMSFVNPQITNLVPVLKSYWLS IHVSVITASYGFLGLSCLLGLLALVLMALKNSANCERLNAQIRYITAINEISLIVGLSML TLGNFFGGVWANESWGRYWGWDSKETWSYVSIIVYAIVLHLKLIPKLGSIYVYCVSSTLA YSSIIMTYFGVNFYLTGMHSYAAGDAPQIPAPFYCIIAAIILIIALAFRGRDVKTI >gi|257442653|gb|ACYG01000022.1| GENE 52 62925 - 63896 799 323 aa, chain - ## HITS:1 COG:ECs5055 KEGG:ns NR:ns ## COG: ECs5055 COG3301 # Protein_GI_number: 15834309 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Escherichia coli O157:H7 # 17 317 14 314 318 154 36.0 2e-37 MNGAINFTATFSHGVEWGWPIAVYLLLAGMSGGALIVAILVKFYKKQTASTPLFKAASLL SFVAILLGMVCLVADLERPLLFWKILINYNFTSVMSVGVAALCVYIPLTFVACLYAFEEC LREFLTHNLSFLKGLFELAMKILNALRPLFLALTLVFAVAICAYTGFLISVLVRFPILNT AVLPALFVASGLSAGIAGSSLIAALFFKADPHGGDLKTLHAVEWPVLAMEILLIGMIFVS LITGSDVQKAASVAFSEGVYAQLFWLGVVGVGFCVPLVLNFALGKKIAHTAFAFYVSALA SVVGVLLLRMFILYAGQTYDIIM >gi|257442653|gb|ACYG01000022.1| GENE 53 63898 - 64605 746 235 aa, chain - ## HITS:1 COG:HI1067 KEGG:ns NR:ns ## COG: HI1067 COG0437 # Protein_GI_number: 16272998 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Haemophilus influenzae # 5 229 6 217 225 173 42.0 3e-43 MQKQRRNFIKSAALGSLGLGAIASSLLAQNSADKIAQDANASAKKQEPKKPHYGMIFDQN KCVGCTDCEIACKKVNLVPKGQMRLFIQDKTDPLNLKEKRYVRVSCQQCEDAPCVKVCPT KACHKDEKTGITTMNTDDCIACKYCIVACPYDVRFINHETKAAESCNFCLDTNLKDGHEP ACIEACRYEAIVFGDLNDEGSHISKLLRVKDSLRMHPECGTKPSLRYIPAVKLGV >gi|257442653|gb|ACYG01000022.1| GENE 54 64634 - 65407 802 257 aa, chain - ## HITS:1 COG:fkpA KEGG:ns NR:ns ## COG: fkpA COG0545 # Protein_GI_number: 16131226 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli K12 # 20 238 39 256 270 132 38.0 8e-31 MQKRLKIFLPIVLASCALGANLTTQEQKESYSIGASTGSYVSNQLHSQAALGVKYDLDAV IEGFLDALKKQQKLKDEEIIALLNQRADKLNKIVETNSKAELDKNLKAGKEFMAKNAKNP DVKTTKSGLQYEILKLGMGEKPKPESVVVMNYKAYLTNGSVFDDTFASKIPAHLSMIGLI DGLREGLLLMNTGSKYKFTIPSNLAYGNVDVDRIPAGSVVIFEAELLKVLKPGELADAAK KLSESEAKSFHDANKTK >gi|257442653|gb|ACYG01000022.1| GENE 55 65459 - 67534 1907 691 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1871 NR:ns ## KEGG: CCC13826_1871 # Name: not_defined # Def: tRNA synthetase, class II # Organism: C.concisus # Pathway: not_defined # 1 691 1 688 688 1262 84.0 0 MKKWNKMLLGALACISIFAAGACADEGMGHEMEMSQKSRDVIANPKGTLQSRGVISLQDY VVEEREMYDWLFKNHPIFTKYGGKTVGKMDVHDRGLEWLAEGHGFDFSKASKRDDGKGYS SMMYRIPAGSSLQFPNKFIGPEKCGECHPAQYETWSRSRHATTIRFPGEHPEVNNNLTDP VFSPDTASILPKGITPDVIYATVGHLRTKFGYVDAWLLRGTYHVEGGLLRDGTGQIVAGG NQFQRTWALNLDDETVKKIKKIVPEFPETLADYGDNGGYVRGLASYAAKYKKSMFFQANS SYCEVCHPFKFDFKTKKEFYAALGNAKELQKHTISKGITCEECHGAGGHLDGATNFRTSN CERCHQRFNYSPDLARANPLNNGNPDLSLSSKFKSMGPGCGSEGSQSYFTAHYEKGMRCV TCHDPHDNTGPVVGDKTVKGVNYNSEQGYLSAFYTKPKITKECKDCHQEQAYIAARADTH KDNTCASCHMPFMMSCENFYAIQFQDNAGFDTQRRSHIWKIDIDPARKSLVAGDAAKGPR DAKDWHFQRNKDGRNFVDLMWSCARTSWADKDMQDTKGCHSPVVSELKETLHFKNQKQVY DEVMGWQTPIKSDFSQVKIGIQGIYSILETKKLNSSDKTRVYELIEKAQDTVDLIEKDGS WGMHGFKYTKQRLEAAKEYIKEAQRILNNNL >gi|257442653|gb|ACYG01000022.1| GENE 56 67639 - 69075 1514 478 aa, chain - ## HITS:1 COG:Cj1492c_2 KEGG:ns NR:ns ## COG: Cj1492c_2 COG0642 # Protein_GI_number: 15792807 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 265 478 11 220 226 113 35.0 8e-25 MRWGISLKYKFKFIVALFVLLYIVITALVFNFYRELALKDTRREAFYILDTMNAVRDYVS TVQRPLINELKEKKLLSEDFFDPRLMSSTYITREIYKIQLAKNHINYDYKLVATDPLNPE HEGSEFENEILEGFKENKYKEYSRVIYDKGGASYLLSLPITNSQPSCTECHSINAAPKKM QELYGDVGNFKGGLGDTIAMISFRIPIKSILLYHTKEFVVSGLSLLAVFLICIFCIYKIH KKNETLKMQTQLLLINQSRLALMGEMIGNISHQWRQPLSQISSTLINLELYNERGKLSKE RLEDGIKDAGEQVKFMSDTIEDFKNFFNPNMPKREFSAGEAIEQARKILNASLKKHVIDI SVRIEENFTLYGNVNELIQVIINIINNAKEAFLDVPLKRREIKIRSFLKQGERVITIENN ASRIDEAQLDKIFEPHFTTKQQGSGLGLYMSKMIIEKNGGSISAANSDEGAIFTIAFR >gi|257442653|gb|ACYG01000022.1| GENE 57 69047 - 69736 826 229 aa, chain - ## HITS:1 COG:Cj1491c KEGG:ns NR:ns ## COG: Cj1491c COG0745 # Protein_GI_number: 15792806 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 15 225 10 220 226 108 30.0 6e-24 MQDYELLDVLSNKRVLCLEDEPGILKNIIESLQLFFGEVVGVKDGLEALDEAMSGSYDAL VFDIGVPHMDGLEVVKKIRAAGISVPIVILSSHTEQEYLWRAVELKITRYLPKPYDKNAF IKALQDVAAELINHAPIFSINDELKYDFAKKIIYVKDSACHLSKSESKLLEYFLARKNQT VTYEQLFDYMWEFEQPSKEAIKAIVKELRRKIGKDVIKNLYAVGYLFEV >gi|257442653|gb|ACYG01000022.1| GENE 58 70084 - 70689 722 201 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0992 NR:ns ## KEGG: CCV52592_0992 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 195 1 194 211 161 48.0 2e-38 MAMTNYMELLMANQPWNLILFMAVPMGLAEAIVASEFFSLYRAKEGSLALKINKCLSIIL GAYFTILIIYVAVKILPVIHLRGAADTLALAAYAAAALPALVLLLLELGVIAKGAEFRAR LKFHFLALIVFLVLGHVAMIFGMTDPGMSGMDHSMMDHGSMSGMSHDMGSMEGMDHSHMD HGSMENMDHGSMDHSKMEHSY >gi|257442653|gb|ACYG01000022.1| GENE 59 71003 - 71221 314 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459882|ref|ZP_05624988.1| ## NR: gi|257459882|ref|ZP_05624988.1| hypothetical protein CAMGR0001_2238 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2238 [Campylobacter gracilis RM3268] # 35 72 1 38 38 71 100.0 2e-11 MKNALLFACAALFICACSNPEQPKPGVSHCSEPKMDEASHQMIQICGKSEDPQIENMQCD KNGLCFGTAKIR >gi|257442653|gb|ACYG01000022.1| GENE 60 71542 - 71736 92 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459883|ref|ZP_05624989.1| ## NR: gi|257459883|ref|ZP_05624989.1| hypothetical protein CAMGR0001_2239 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2239 [Campylobacter gracilis RM3268] # 1 64 1 64 64 105 100.0 8e-22 MLAVQNFAQAQNPHQAILCRCKISRSQLRSVEFLVVQMGVQNLRRVVGVLGAKDAVSSTD GASL >gi|257442653|gb|ACYG01000022.1| GENE 61 72281 - 72697 543 138 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0645 NR:ns ## KEGG: ECUMN_0645 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 136 3 140 148 82 34.0 8e-15 MDKQTALDFLRLHQPMPAQLSDQLAAEFRAVREFLRDNPCDEALEPLLRSLNEGDGAGEY PLVDEVLGAADDAAAVAAIRAVLEDPSTGSGARFWATLFSVSFVRKELIASLETSLKYAN DDLIELTKEQIEMFKQLT >gi|257442653|gb|ACYG01000022.1| GENE 62 73021 - 74421 1445 466 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0434 NR:ns ## KEGG: CCV52592_0434 # Name: not_defined # Def: hydroxylamine oxidase # Organism: C.curvus # Pathway: Nitrogen metabolism [PATH:ccv00910] # 1 463 1 453 455 688 70.0 0 MLKKVAILIACIASFAFAEMPAQHANMSASDANVSNSVNVSLTKNLKVNRQLTPLARRCV ECHAEKTPGVVADWKMSRHAHVGVSCTDCHSQPADSPMAAKEPHPKDTDNHISVLVSPKT CAKCHSNEVKDFENSGHARGAMQMQANKGIVDLMYHYEGRDIPDLKHAPDITGCSQCHGS VVKMDEHNKPTKETWPIYGIGTVYPDGGVGGCKSCHSGHKFSIAEARKPAACASCHLGPD HPDIEIYNNSMHGHVFNAEGNEWKFDSAPGTWAVPDYRAPTCATCHMSGGVGDLNSTHNV SQRLKWNLWQPKSNLRTGGNETAVSEFLNTGKLNVGNPLAGNLNGPEAARAEMKQVCKEC HASTHANNFFEVGDKQVLLYNVYNDEATKMLKELKEKKLLKDDPWADAFQRIYYVSWHHE GRRMRQGALMGGPDYSHWHGVFEVKNDIREMREIYERRIKTGKIEE >gi|257442653|gb|ACYG01000022.1| GENE 63 74432 - 74989 761 185 aa, chain - ## HITS:1 COG:VC1951 KEGG:ns NR:ns ## COG: VC1951 COG3005 # Protein_GI_number: 15641953 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Vibrio cholerae # 1 163 7 174 368 73 31.0 1e-13 MKKKTLVLLVGACVLIGMILSLGIAEMVHLTGTDKFCVSCHTMQPMANAFHNDVHGGNNP QGFKADCVACHVSHENTFMYLWTKALTSANDVYKTVFTDADKIDWQEKRKERNHFVYESG CLSCHRNLKEQNNQVNKAWLAHRDYFAGTIGKTCVQCHENVGHKNMGIEITKYWDKYNRE NNKTK >gi|257442653|gb|ACYG01000022.1| GENE 64 75189 - 76034 1054 281 aa, chain + ## HITS:1 COG:CAC3091 KEGG:ns NR:ns ## COG: CAC3091 COG1951 # Protein_GI_number: 15896342 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain # Organism: Clostridium acetobutylicum # 1 281 3 282 282 308 55.0 5e-84 MKTIQADEITKVVSELCKKACYQVTPDMRAAFEKARENEISPIGKDILGKLLQNADLAAK EVAPICQDTGMTVVFVELGQDVHIEGGYLEDAINAGVADGYIGGYLRKSVVAEPLFERKN TTNNTPAVINTRIVPGDKLKIKVAPKGFGSENKSVLKMLVPADGIEGVKKVFLEAVKYAG PNACPPMVVGVGIGGTMDKAALLAKQAAVRSIDSRNPDERYAKLEDELLEMARATGVGPQ GLGGINTAVKVNVEWYPTHIAGLPVAVNINCHAARHADAEL >gi|257442653|gb|ACYG01000022.1| GENE 65 76045 - 76605 830 186 aa, chain + ## HITS:1 COG:aq_1679 KEGG:ns NR:ns ## COG: aq_1679 COG1838 # Protein_GI_number: 15606776 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain # Organism: Aquifex aeolicus # 5 186 3 183 185 191 56.0 6e-49 MSEVKRITAPFDKSVVKSLKAGDNVLISGTIIAARDAAHKALTETLARGEKLPVNLAGET IYYLGPTPAKPGQAIGAAGPTTSGRMDKYTPTMINEVGINGMIGKGYRSDAVVEAMKKSG CVYMVAIGGAGALISQSIKKYEVLAYPELGPEAVARLTVEDFPAIVAIDSEGNNFYEVGQ APYRKI >gi|257442653|gb|ACYG01000022.1| GENE 66 76983 - 78011 737 342 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1736 NR:ns ## KEGG: CHAB381_1736 # Name: not_defined # Def: putative galanin # Organism: C.hominis_BAA-381 # Pathway: not_defined # 82 341 37 313 315 146 34.0 1e-33 MSASELEQIRLGLLYKAKRNTIFAAACMLGYGAFLLYKLRDGGGMADLLPFIGLFTVVLI VAVLCDQASIKATIIQAAGLFIICLFLDDLQNRPTISKYILLAIITLILAASSLFVLFRG FKQDYSVKFQCAFKEHYLMPYFKAFGYRYDIGGSIDPAKLKLSGLFFRLDKFKGGNDRVS GVYNGVKFAFCDVSLFNRFSESEILGTFFYAEFHKRISSKTLIFPACAGAPNTLGLKKID MDDTEFNAAFAVYCEDAAGAMHILAPAFMRRLLRFAGAVAAPVSLSFADSKIYIFVNTGR DNFEPDIGESVLRRDPAAQLKRELSHFLAIVKNLKLNERIWS >gi|257442653|gb|ACYG01000022.1| GENE 67 78382 - 79389 588 335 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459893|ref|ZP_05624999.1| ## NR: gi|257459893|ref|ZP_05624999.1| hypothetical protein CAMGR0001_2249 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2249 [Campylobacter gracilis RM3268] # 1 335 1 335 335 660 100.0 0 MKILISFLCLLSFVFAEAALALAGGTNSAQKDQSLEILTANLSTALQEIDEAGHRPDGIP CESIVRLRAAFMEFLQSAGESAPQILKSLRFAPNMAISQDGKFRAYSVDISTGGTMGASY VAYQYASGGQNFIMDFADKGAQQMQECVLGGRRDCACGDWAVGTAWGGDRVIKVFKVKEN LYLIYGASKGSTKLTNDEFWAVEASEAGINLANIFHYVRSCGGDCDCSKRSSLVSPPHDS ARFGIEYDFFSYSYLDGSDEIKNKYAKRTFLTFENGILGALKVKYSDKYPDGELVDEYQY FKFDGEKFTIESKIIHCEPGRIIEELVAPSSAQGL >gi|257442653|gb|ACYG01000022.1| GENE 68 79581 - 80810 835 409 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459895|ref|ZP_05625001.1| ## NR: gi|257459895|ref|ZP_05625001.1| hypothetical protein CAMGR0001_2251 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2251 [Campylobacter gracilis RM3268] # 1 401 1 401 409 644 100.0 0 MCFTGILDLKRDGLYLPIREGDELAVIYEASSSNSSREALRGLNSDREALSGENSAERPN CEISSSGNSTTANSNRDAYSDTAASARQNSTASDLSDKDRSGINSAASPLDFVNLSLGAQ RWKDAGSTALAAIFAAFGVALAAMSIYCIIFIFDAKAPAGLLALLILAPFAYCSFRFMRR DWRAAKFGRIFAALAHSKEPKRSGEAEGYASGVRVLQSDDVYYYGFALDGLYLSGDSKRR IVSDALRVDQNLAELADGENCMKFKNLNAEDSANSASVKNFAKSANSTSSANSTNAANSI NSARSAEVAAPAKAKDAPQSFELQNGDILRARYKDYRISGLWNQSRGMKLGDTRSGLRRV IDFIASVALQIGLRLGGTLVLTRLGDHIGGDFGNALSFIGFLLLLSLML >gi|257442653|gb|ACYG01000022.1| GENE 69 80965 - 81684 1032 239 aa, chain - ## HITS:1 COG:HI0056 KEGG:ns NR:ns ## COG: HI0056 COG0861 # Protein_GI_number: 16272030 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Haemophilus influenzae # 1 234 1 234 237 267 68.0 1e-71 MFEWIASPEAWISLATLTGLEIVLGIDNIIFIAILCGRLPEAQRGRARIMGLALAMFTRI LLLLSLSWIMGLTKPLFSVLARDFSGRDLVLIGGGLFLLVKSTLEIHSSATGEAHEHSAS GGKASFGGTLVQIAVLDIIFSLDSVITAVGMAQHLPVMILAVIIAVGVMMLASGAIARFV DTNPTIKILALAFLILVGVSLIADGLGFHIPKGYIYFSMAFSLLVELINIQIRKKSAAK >gi|257442653|gb|ACYG01000022.1| GENE 70 81990 - 82757 745 255 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0401 NR:ns ## KEGG: CCC13826_0401 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 232 10 245 256 67 26.0 5e-10 MKYVLSVALAAFIFAGCGEDEVELVKNYTLPDFKSMSIGTAIEGSKICKNITWNKEENGG LKTVKMVCDLDMERMKAKIVQDKTESLKSYKQRALDTSLNNAMIYYKSKVYDEQGLLKLA KEHCKLNEVKFQETFKTKGKIEFDDEDKIVDCDDKLKGEFQKEYSVDYIIEYLKRAVYYS QLTVEQYDAVFGRKKVEYPSKAVIELNFIVNADKSISLSDKFMVTEDVADDIIKTSSFTG KRVAEDALVIFYERK >gi|257442653|gb|ACYG01000022.1| GENE 71 83284 - 83847 542 187 aa, chain - ## HITS:1 COG:Cj0010c KEGG:ns NR:ns ## COG: Cj0010c COG0164 # Protein_GI_number: 15791409 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Campylobacter jejuni # 5 178 18 190 191 180 51.0 1e-45 MSGQICGIDEAGRGCLAGPLCVAGCVLQREIAGLADSKKLSEKRREELYARIIENSRYKI VEISSAQVDEAGLSSCLRSALEQILAYFMGFSGQIIYDGNATFGVRGLQTLVKADAQIAE VSAASILAKVTRDRTMNELARRYPQYGFAQNKGYGSRAHIAAIERYGLTPFHRASYKIKS LQPSLFD >gi|257442653|gb|ACYG01000022.1| GENE 72 83844 - 84269 328 141 aa, chain - ## HITS:1 COG:Cj0232c KEGG:ns NR:ns ## COG: Cj0232c COG1714 # Protein_GI_number: 15791604 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Campylobacter jejuni # 3 130 2 128 136 104 46.0 6e-23 MAKQKAKISPIFLRVKAFIVDLFIIAMPLLYGVTYLVLGSKEALWRNQTAIALIWLAYGA ICAAFYARSAQTPGYKLAGLYLIDVRSGRKASFFRALARFGCFVLAGFSVIGLLICFFRK DRLNLHDLLSGAAPVVRKDAQ >gi|257442653|gb|ACYG01000022.1| GENE 73 84372 - 84983 547 203 aa, chain - ## HITS:1 COG:Cj0233c KEGG:ns NR:ns ## COG: Cj0233c COG0461 # Protein_GI_number: 15791605 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Campylobacter jejuni # 1 203 1 202 202 306 74.0 1e-83 MNIEKIYRDCGAYLRGHFLLSSGNHSEFYLQSAKVLEDPQLAGQLADELAAIIEKAGVEF DSVCSPALGGILAGYELARAAKKRFIFTERVDRVMSLRRGFEVRKGERFIVCEDIVTTGG SALESARLIENLGGEVVGFAALANRGFCKVANLAGSSAKAGAKLPADKPFFALGNFEFEI YEPATCPLCAAGSKAIKPGSRGN >gi|257442653|gb|ACYG01000022.1| GENE 74 84987 - 85544 850 185 aa, chain - ## HITS:1 COG:Cj0234c KEGG:ns NR:ns ## COG: Cj0234c COG0233 # Protein_GI_number: 15791606 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Campylobacter jejuni # 1 185 3 187 187 252 76.0 3e-67 MLEAIYKEQRANGDRAIEALKKDFTTLRTGKVSVAILDHILVDYYGSQTPLNQVATVLST DAVTISITPWEKPMLKAIESAIAAANIGVNPTNDGESVKLFFPPMTVEQRQENAKKAKAM GEKAKIGIRNVRKDANDEIKKLEKDKAISEDDAKKGYDEVQKITDSYSAKIDDAVKAKEA ELLKV >gi|257442653|gb|ACYG01000022.1| GENE 75 85646 - 86176 471 176 aa, chain - ## HITS:1 COG:Cj0235c KEGG:ns NR:ns ## COG: Cj0235c COG1314 # Protein_GI_number: 15791607 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Campylobacter jejuni # 1 119 1 114 123 97 52.0 1e-20 MTTLFLVLQVVFAVIITISVLLQKSSSIGLGAYSGSNESLFGAKGPAGFLAKFTAAMGIL FVINTLVLAYFYQQDAKSSVVDRVKIEANATKSVPNAVPGVPSIPASGAKPNFAPASTES NSIISGEINATDTKIEEPAAPATDTAAASAPARSQASSAVSDTNASAVSADQNTTK >gi|257442653|gb|ACYG01000022.1| GENE 76 86271 - 86966 920 231 aa, chain - ## HITS:1 COG:Cj0236c KEGG:ns NR:ns ## COG: Cj0236c COG0670 # Protein_GI_number: 15791608 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Campylobacter jejuni # 1 226 1 225 231 132 42.0 6e-31 MSLYDRRNYADGYELSDASLEQGRISQTIKQTYALLTASMIAAAAGAFVAMSFGVSLAIH PFLYLVLLMGLIFGMQAAVNRGANTIALVLLFAFTFITGLTLGKLIAIYIAAGAGDVVTH AFVATAITFGALTVYAMNTKTNFDSWGKPLLVSLVAIIVLSLLNYFFFKSTVLDIAISAF SALIFSMYIIYDTKNIINGTYTSPIMAAVDMYLNIYNLFLSLLRIFGASRD >gi|257442653|gb|ACYG01000022.1| GENE 77 87098 - 87766 752 222 aa, chain + ## HITS:1 COG:Cj0237 KEGG:ns NR:ns ## COG: Cj0237 COG0288 # Protein_GI_number: 15791609 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Campylobacter jejuni # 5 206 4 205 211 278 60.0 5e-75 MPSQLINGAIKFMEENFTEHAELFGSLANHQKPHTLFIGCSDSRVVPSLITSTLPGELFV VRNIANVVPPYRISEEFLATTSAIEYALYSLKIKNIIVCGHSNCGGCAALFYDAKKLEKI PNVRRWLNLMQPVKDEVEKLKDLGTDKREWITERLNIINSMQNLLSFPGIKDAYKNGEIK IYGWHYVIETGELFNYDDEGAHFTLLNKGMDYEKIYNQLFND >gi|257442653|gb|ACYG01000022.1| GENE 78 87732 - 89801 2016 689 aa, chain + ## HITS:1 COG:Cj0238_2 KEGG:ns NR:ns ## COG: Cj0238_2 COG0668 # Protein_GI_number: 15791610 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Campylobacter jejuni # 296 689 6 397 401 394 50.0 1e-109 MKKSIISFLTISLFSVALAFADLNTTGEGSFVETNSSAPEANLTLENNKTEIKKEVAKIL SKSLGAEDGNKTEVINMIAEKVAKTETSQKKAPNGETLISVIKEIKKLNLQRSSLLNGGD ANASKNELDAIDRNKAKLFDRLPFAITQQDMDIESIMSYAQNKKNIQTTLKKYAKKQSSP EYVNASADLEKMEMAEIFYTSLMKIEDMFVNGASRSALESELSSTLLNIQTRDFSKLNDL KNNLSSQEQIDALESKINDLKNDKQTYDEVLTYLSRNSDLLASSVVFTSLNFKSVIDYIN DKIPFKLSHVNFGKLILITLITLFFYSLRRLLANIIYFVFKFFNKSFSLDSETLKTQVVG IIKRPMGILLIAYSVDICLSIFYYPAPVPIKFANLFSIIYVVLWAWLIIEIIDGYGIVVL GNITKKGVRKDIINLVVKILYVIVIIIAALLVLKRLGFDISALMASLGIGGLAIAFATKD IIANFFSSVMLLFDNSFSQGDWVVLGDIEGNVVETGFRKTTIRTFDNALVFVPNSNIMAQ NIKNWSRRKVGRNLKLTVGVEYGASTAQLRKCVNDIKEMLKSHPGIAQSADTALNSKDFR MRYRQNMVSIDDLAGYKSTMFVALDSFGDSSINILVYCFTKTVIWANFIQTKEDVLFKIM EIVEQNGLSFAFPSQSVYIENIPEIEANA >gi|257442653|gb|ACYG01000022.1| GENE 79 89838 - 90011 402 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADFDDFEDEEFDEDEYEDDDLIGGDESYNYNYDEDDYSYEDDDGFNDYSDLDSEDY >gi|257442653|gb|ACYG01000022.1| GENE 80 90011 - 90742 273 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 17 215 19 201 201 109 30 6e-23 MFRSRALPFDPRANKIVSLQSLKFHHGGLCEDYVSTLNRDIADTPIQNADLFTIITQSFR EARGEECEFSQISKLYQICLGFSRIFNNASEIYNHDFYFDCIAQPSKPSGELTDALAQAF GGIENFKSEFLKRAMGLFGSGWCWLVCDERGANLEIITTQNADTPIARGKIPLLACDLWE HAYYIDYQNARKSYVESFLRFADFGFASDAYSWAKKQGLSSVKLYISELHPAASSRCDCG YCG >gi|257442653|gb|ACYG01000022.1| GENE 81 91638 - 93425 1609 595 aa, chain - ## HITS:1 COG:BH0871 KEGG:ns NR:ns ## COG: BH0871 COG1164 # Protein_GI_number: 15613434 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Bacillus halodurans # 63 569 68 575 589 214 29.0 4e-55 MELPRWTFEDAYGDFDDARFTDALSNLDEILGEIEELLGAGGGLNLLINAYERGFEEANS LLAFCRCKSSGDTKDERVGAAEAKIREKFLRLERTKEIIFEKIDALDPSDTARQTQEFAR IKFLYDERKSSWRAKFDAKERKIYEDAAASSFAPLYGVFRHLNNLIAVQATDKNGVKSIY NLSKCAGVLKGSPDATLRKSVFDGLAEHYDKHASLYADVLNLLQGFRLGEFRAAETDILT PSLQQNKISEQAVTAMFAALDRRSDKIRECVSLRAKYFPQGKIYACDLLAPSPFASTEEI PYERAIETICEALGEVSEEIPEFIKMMLDKNWIEAQVRGNKAGGAFYTRFDKFRQPRVFS SYMGTQAHMIQQAHELGHAWHYWIMRDLPALHTQFPMTLAEAASTFNEAVLRNYLRKNSA DKNLTFDILWQELKSAANFMLHIGVRFDFEIAFLKARQKGAVGVAQIEELMQKAWRGRYG DTTQDAEGFLPYFKLHFYKTDQYIYNYPYTVGYLLSQFLLDEFRRSGDKFISAYKAFLRE CGVMSVEALLQKHFGKDARTLEFWLECVDNALIYADEFKRLEERIKFDKSKDRAE >gi|257442653|gb|ACYG01000022.1| GENE 82 93434 - 94309 953 291 aa, chain - ## HITS:1 COG:VCA0665 KEGG:ns NR:ns ## COG: VCA0665 COG3069 # Protein_GI_number: 15601423 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Vibrio cholerae # 11 281 185 446 459 166 39.0 7e-41 MVLIGASTAAAAKATQLSILDYVFIYKIPAALPTSIVMGIALVFWNRYLDKKEGWVCSEH VGEVMEFDGAVQNPEAAAPKIYAILPFLPMILVVVFSQYCIASIKLDISAIIILSIVIAM LFEAVRHGFKFDPIAEGVKVFFQAMGKSLSGVVILIIAAGVFAEGFKALGMLDSIVGLAN SLGFGGFGMSVLFVVITTLVTIISGSNGASFYPLIEMVPHIAAKLNVNSVMLVLPMHQAS TIARPLSPVAGVVVAIAGMLKCSPLDIVKRCSVPAVLGLVSHHIFVFLLSL >gi|257442653|gb|ACYG01000022.1| GENE 83 94257 - 94826 503 189 aa, chain - ## HITS:1 COG:VCA0665 KEGG:ns NR:ns ## COG: VCA0665 COG3069 # Protein_GI_number: 15601423 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Vibrio cholerae # 5 138 8 140 459 97 39.0 1e-20 MTAGIIIGTVVLFIVGWAIVRGKYAPLVLFLSGVFMLICSVALGTGNFMPKQAVATGNAY LNIIEFIRYMFSNRFASLGLIIMFMVGFASYMTHIGANHAFVSIATKRFARIKNPYVMVF VAFAMAKLISMVITSAVGAWRTMSCAARTRTHLAWTKQAHRRFDLRDVVSRLNGTHRRID RRRGEGHAT >gi|257442653|gb|ACYG01000022.1| GENE 84 96214 - 97365 1380 383 aa, chain - ## HITS:1 COG:FN2119 KEGG:ns NR:ns ## COG: FN2119 COG2849 # Protein_GI_number: 19705409 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 91 379 47 333 338 137 31.0 3e-32 MKFLNTSALKLLFPFLALGAQALEPKIVMQPEPVLKNGLYFVADKPYSGALKVLHYSVED LYDVNFMGVVYPRAKPLPPTLIREIDVKDGTAVLQRDYFDGRDKPSNEYPLKNGLYDGVA KSYYADGGELKSQSEYKAGKREGFYKLYYQGNGKLKQQGAYKADRREGVFTDYYESGEVS ARHTYKGGLRNGKDVDYYKSGKVRGMRSYKEGKRQGVEKWYHANGALREAGAYKDDRKQG VWRLFYEDGKTRVAENFKDGERDGAVREYYPSDALQGEYEFERDRQTGTSKQYYADGALA AKVMFRDGRKHGLYETYHENGALKARVTFKDGLETGTAKHYYADGKLEAEGEFERGRLVR AKKYDESGKLISDKSDKNGLTRE >gi|257442653|gb|ACYG01000022.1| GENE 85 97416 - 98834 661 472 aa, chain - ## HITS:1 COG:no KEGG:MS0984 NR:ns ## KEGG: MS0984 # Name: not_defined # Def: hypothetical protein # Organism: M.succiniciproducens # Pathway: not_defined # 11 446 16 458 483 134 28.0 1e-29 MSKISNSLNSFEQLKEAVNTLDIKSIPENETQEFARNKEALIYIESYVNLLDENLLPNSF FGEFQNCFVNWNRSTRHLTTIVDNALIILAKYSTIYIPKDQAESTIMGMIAGYNDAIKTS LDDLKLDEIKNKIADVENSIQKFSIANDEFAQKYGEICGYCNEIENFRTHLVVRQENKDI SIQQEIENARNKITQDMEATKEKIIENSQKLEEIGKFHIRIFGELNDNVRSGGLEQKLDN MFENLDEYENTMKQRFDEYDKIIKDLNEKATNASLSSSYKQQGDAIRKTVRRWDIGFILS IIAIAAVAAWTFIGVNEILNKDISAVITEISQIKGGVNKTYNVSIIPSDKIYIMIFGFFS KITMALPFIWLAIFCSNRRKEAMRLEQEYAHKVAVASSYASYKEQISNLNETNPELLKEL MASTINIISKNPSDFLDKSKSSDKLIDCDGIITKMKQLPEWLIDLIKQKNKN >gi|257442653|gb|ACYG01000022.1| GENE 86 98933 - 99439 427 168 aa, chain - ## HITS:1 COG:Cj1254 KEGG:ns NR:ns ## COG: Cj1254 COG3663 # Protein_GI_number: 15792578 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Campylobacter jejuni # 4 166 6 160 160 123 40.0 2e-28 MSQTHPFKPIFDENSKILILGSFPSVVSRNFGFYYANPQNRFWRVLAGILNAPPPASTDE KIKFLLTRGIAIYDAAICCEIKGSSDAKMTAVVPANLEPIFSGARIVQVYANGGKAHEIC EKYLKTQILNATGKEPVKLPSTSPANANFGFERLVREWTIVADVLKMT >gi|257442653|gb|ACYG01000022.1| GENE 87 99781 - 100989 1482 402 aa, chain - ## HITS:1 COG:Cj1519 KEGG:ns NR:ns ## COG: Cj1519 COG0303 # Protein_GI_number: 15792832 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Campylobacter jejuni # 6 400 5 396 396 391 48.0 1e-108 MEFEKFESAMGRFASTVQKSSRIEKVAITQALGRILATDVAAPFSTPRRPTAAMDGYALK GADLSEGAKFKIVGTTPAGKMPSAAAKAGECVKTFTGGLMCEGSDTLLPIENVQVQGSEI VVTKPVPAGFAVRAAGESYREGELLLRSGTKLGFSQIALLAELGLFHISVFVRPKVAILA TGSEIKDLGERLENDAQIYSSNHIALANLVTQLGYEAMIMPIARDDEKELEGAILSALQS ADILLTSGGVSVGDYDFVQSTLQSKFELIVKGAAIKPGRHVRVAKTGEKYIFAFPGFPLS ALITCILFLRVFLQRSFGVHESTEFSAILDHDYVKKTPWLEFIPAVLQNRDGRLFVSLQS KRQGSSAILNNLDDDSVLLVAPLEVKELKKGELVRVISVPKI >gi|257442653|gb|ACYG01000022.1| GENE 88 100989 - 102287 1111 432 aa, chain - ## HITS:1 COG:Cj1375 KEGG:ns NR:ns ## COG: Cj1375 COG0477 # Protein_GI_number: 15792698 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 1 425 1 427 431 391 57.0 1e-108 MLKSVLPLSFIIATRFFGLFILLPVLSLYSLSLHGANESLVGLLFGIYAIMQVILQTPFG VLSDKIGRKKTLAIGLALFIVGACVCAASESIYTMIFGRFLQGCGAVGAVATALISDFTR EEERGKAMAVMGAMIGVSFGVAMILSPLLSAKFGLASLFHLSSALTLLCLVLLFFVVPTE PHIRSLRQKVPLGSLLSDKNLMLMNLTNFFQKAFMTAAFFLIPILLVQKFGLSKSDLTKI YALGAIFGFTAMGASGALGEKRALAKQILLIGICFFIASYLIFAFASGASAFVVGVMLFF VGFNAHEPIMQSLASKFAKVAQKGAALGIFNSFGFFGSFLGGLCGGALFGKIGIEALGIG VAVLGVIWLVLLSRLSDPKLFKNLYFPKGGDFSALQGVKGIIEIYETDGELVVKFNSKLI NEDQIYKIVGGK >gi|257442653|gb|ACYG01000022.1| GENE 89 102393 - 103022 281 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 1 199 6 203 207 112 37 7e-24 MKILLATSNKNKVKEIKEFFTGYDVCALSEVLQPFEIDECGTSFKQNALIKVRAVYEVLK SKNLQSEFFVLSDDSGICVDALGGAPGIFSARFSGADATDASNREKLVASLRALGLKESP AHYTAAIALKCDLGEFCTHGFMHGTAITQQRGQNGFGYDFMFIPRGFDRTIGELPAAVKF KISHRTKGLTLMRILLKNLEKQMRLAKFH >gi|257442653|gb|ACYG01000022.1| GENE 90 103926 - 105254 1911 442 aa, chain + ## HITS:1 COG:TM1172 KEGG:ns NR:ns ## COG: TM1172 COG1151 # Protein_GI_number: 15643928 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Thermotoga maritima # 5 440 1 429 431 416 47.0 1e-116 MSDNLEMFCHQCQMSAPEGCGAKGQDRGTCGKNSTLSLLQDTMVFGLKGLSAYRHHAREL GADTSAVDTVMGDTLYFTLTNSNFNFDEHIAQLMAVGSAGVQMMDILSEAHTAKFGVPTP VKVSQNKVEGKAILVSGHNLHALEALLKATEGKGINIYTHSEMLPAHGYPQLRKYPHLKG NVGKAWFDQTKLFNEFKGAILMTTNCIVPLRSSCSYAERLFGYSIAGTDGIKHIQNDDFT PLIECALACGDVSMDSDESLVTGGHYKTILSLAPQILDAIKSGKIRRFFVIAGCDAPGKG REYYRELALSLPKDCVILTSSCGKFRFNDVDFGNVPGTELPRYIDLGQCNDSNGAVKIAL ALSEATGIAVNDLPVSIVLMWMEQKAVIILLALFSLGVKNINVGPTVPEFFNDEILGFLV QNFGLRLISGDAQADLKYFLGE >gi|257442653|gb|ACYG01000022.1| GENE 91 106147 - 106977 1089 276 aa, chain - ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 1 255 5 262 290 176 36.0 5e-44 MKKVLTVQDISCVGKVSLTVALPILSAMGMSTSVIPTAVLSMHTGFSGYTFCDLSSQIRA IMAHWKDRGVVFDGIYTGFLGSAAQIEIMGELFASFGGAGKTILVDPCMGDNGVFYPGFN EDFARMMALLCAQADVITPNITEACAITGVPYREDADKDFIMDLLARLRELGARQVILKG IGYIADQCGVFSYDARTGRTNEYFHELLPVKFNGTGDIFAAVAFGAIMRGKSLETAVRIA ADFVVSTIKETMSDDERNGYEGVDFEAIIPELVRKI >gi|257442653|gb|ACYG01000022.1| GENE 92 107155 - 108057 1147 300 aa, chain + ## HITS:1 COG:VC2673 KEGG:ns NR:ns ## COG: VC2673 COG1575 # Protein_GI_number: 15642668 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Vibrio cholerae # 10 243 11 243 305 206 52.0 4e-53 MITAKALYASARLRSLPLSVSGVLLGSGAAYGAGVFRADIFALALLTTLLFQVLSDYAND YGDAVKGTDDEGRLGPRRAIQTGQMSAAEMKRVIVATALLSAFSSLALSVLAFGERFYLV LLFLALGGASIYAAIRYTVGARAYGYLGLGDVFVFLFFGLLSVLGSYFLYARSLDAALLL PACACGMLSTAVLNLNNMRDIQNDALKGKRTIPVRIGLRAAKRYHYALIAGGASLMLCYS LLRGEQGVKLLYVISFAPLVWHLFFVLKVRECRDFDGQLKVVALCTFAMSALFFVGEILG >gi|257442653|gb|ACYG01000022.1| GENE 93 108592 - 108801 198 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459935|ref|ZP_05625041.1| ## NR: gi|257459935|ref|ZP_05625041.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 69 1 69 69 125 100.0 9e-28 MSRAEFERLFEFLGEGLAHRGCDGTHRLTLEFLRARRMPNETAVLDFCEQNGRYCDCEVL SNVQNCFEF >gi|257442653|gb|ACYG01000022.1| GENE 94 109249 - 111096 2887 615 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0231 NR:ns ## KEGG: CCC13826_0231 # Name: not_defined # Def: arylsulfotransferase # Organism: C.concisus # Pathway: not_defined # 1 615 1 611 611 1127 89.0 0 MKRTLSSFALAAALLGGLSTAALAIGGPSGAHIDYGIPGKIGEVVVNPYDIAPLTAVIKN GGYTLANAKVTIVPKPGGQVISYKVADKHLRTHGGIPVFGLYPDYQNTVEVEYDKIYKGQ TEHIKETYKIYAPAIYLESSGMPSQKGALFDKIEVVKAPSAKFANRLYYVNNFVNKTGKG TKVVWNNPAGGAIEWNYSPNNFILDTKGEVRWYLEPSKIYDLKQPFSAGVMMGFKQNDDG AMTWGYGQRYAKYDIMGREIFNRELPASYNDFSHSMDVAQNGHYFLRAANANYKRADGKN VRTVRDVIVEVDRDGNVVDDFRLYEILDPYRDIVLKTLDQGAVCLNIDASKAGHTASTDE LAAMDTNEKWGDIVGSGPGRNWAHVNSVDYDPSDDSIIISSRHQDAVIKIGRDKKIKWIM GAHKGWKDEFKGFLLQPVDKDGKKIVCEDEYSKCPGYESEKGGFDWQWTQHTAFRIDSKS KKGVVYLTVFDNGDTRGMEQPAMAGMKYSRAVVYKIDEKAKTVEQVWEYGKQRGSEWYSS VTSLAQYQDDLDSVMVYSAVAGMQFDIAKGRPVGVPSPHINEFEWGAKEPSIEIKMTNAM GYQAFPFSLEKAFEK >gi|257442653|gb|ACYG01000022.1| GENE 95 111331 - 111987 924 218 aa, chain + ## HITS:1 COG:STM3193 KEGG:ns NR:ns ## COG: STM3193 COG0526 # Protein_GI_number: 16766493 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 3 218 6 222 223 249 61.0 2e-66 MNLLSKFSKGFLAVVMFGALSASAFTEGEDYVKLQKPLSVEQNTLVKVFSYACPFCYKYD KTVTPKVVEKVAGLKYVPFHLKTKGEYGEAASKIFAVLAVMDEEKGVSLLDENSLFKKAK FAYYKAYHDQKQRWNDGKDEAAFLKTGLDAAGISEADYQKKLEDPKVAELLKKWDESYDV AKIQGVPAFVVNGKYLIMTKSISSIDGMAQLIEELLKK >gi|257442653|gb|ACYG01000022.1| GENE 96 111996 - 112619 676 207 aa, chain + ## HITS:1 COG:STM3194 KEGG:ns NR:ns ## COG: STM3194 COG1495 # Protein_GI_number: 16766494 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 5 196 17 213 225 224 52.0 9e-59 MKFAEKIAKFADSRLPWAILVAVSVGLVVLAHSLFQNYVYMPPCEQCVYIRFAFLCMALG GLVAIINPKNLLLALAGYLLAFWGAIQGIMYSVKLAKIHDAVHGDEPFGVQGCSTEPHYP FGLPLERWAPDWFLPTGDCGYDSPLVPEGVTLSGFQKYLVDLYGDGWYLIPSSKFMSMAD CTLIGFGVCFVVLAAMFICKILTLKKA >gi|257442653|gb|ACYG01000022.1| GENE 97 112659 - 114308 1660 549 aa, chain + ## HITS:1 COG:CC0759_2 KEGG:ns NR:ns ## COG: CC0759_2 COG0642 # Protein_GI_number: 16125012 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Caulobacter vibrioides # 316 519 1 205 244 68 25.0 3e-11 MRALREHNFKIYFIIIFASLFVVLLGVKNYEDAKAQIVALADKNKIAASENMVGNFSFWL DERLHSLVRAAKFMQNADAIRDDEKLGGFIRLFKENSAEFDALQFLREDGEIFVDGKELG DDEAMPKSLRTGLVWFEETKSTLAPTVNFMQRHKTLGEPTLNLCVPVMDSGSFAGVFCGV VKLQNILKNMEKFKLAPDSYAFIVTHGGEILTPMKDAALKKQIEDKFKELFLRGEDITSL NIGSNFISVAEIPTLNWFIGAGTDNEKELAALLNSVLKNALILLFAFAALALVANFLHNF MYSKIKNLQDDYEALLKHKARMSEAGELISGINHQFIQPVNSLNLMISSLLMLQKDGKLD AATLEHMLQKGQAATVLLSDTIEIFRNFYKSSDSPQKFSVQRCIKDLLKLMHTELSKANV AVSLREFKDEEATQRMGIVQQILLILIHNAKDAVVERYKEQIAKRQVFLDIKFENGTCKI AVTDYGSGVSKAARDKILTQPKTTKKQGSGIGLYFGKKLANEKLSGDIRLLSAGDPTTFE LSFEINLKE >gi|257442653|gb|ACYG01000022.1| GENE 98 114310 - 115002 943 230 aa, chain + ## HITS:1 COG:Cj1491c KEGG:ns NR:ns ## COG: Cj1491c COG0745 # Protein_GI_number: 15792806 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 9 220 6 220 226 103 34.0 2e-22 MQEHLKLLKDLSVLIVEDDEIARELLIGGLKPYCLSVWGAADGLEGLERFKKLAPVVVIT DIHMSAMNGFEMMKEMIRVKPAQKFIVFTSYDTDDNLIKSIEHGAASFLKKPVDIAALCR LLVALTYEKNEKFVCLGPQTSINLAKEKIYKNGEEIYLSFLQNKLFWLFAYNLNKLVSYE MIEEFVYEGEQTSKGAIQNVVLRLKRELGVKFKNISESGYIMLDEEQGKI >gi|257442653|gb|ACYG01000022.1| GENE 99 115149 - 116102 635 317 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_2212 NR:ns ## KEGG: CCV52592_2212 # Name: not_defined # Def: putative TonB dependent receptor # Organism: C.curvus # Pathway: not_defined # 41 303 60 322 862 174 36.0 3e-42 MKNFNNISFAVAFIVINISFAQDIYLGRIEVIGEQNRTNPQSSEYGSSNTVSQEEIEKMP KKESTIAEAIKANPNVAFNKKADKSIDSGEISPKDFSINGASYYQNNFLVDNVNFNYDLD PAGKRPSRGLWWAPTLGSQALNLDTDLFKRIKVIDSGVSAKYGDFQGGVINTKTRDPKEG FHGILSTSYTSKKWSKIFIDPLVEQNYTDNTSMMWLNKSDFVKKRYRAGIEGYVSENFGL LFDYTRTSSVIKNITKPGVMDSSIATQPDDKRKAENYFLKRIINAGDNVVLRPSFLYALQ KTEPLSNTIWVRIWICT >gi|257442653|gb|ACYG01000022.1| GENE 100 116087 - 117640 1292 517 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0932 NR:ns ## KEGG: CCV52592_0932 # Name: not_defined # Def: putative TonB dependent receptor # Organism: C.curvus # Pathway: not_defined # 6 517 340 859 859 272 34.0 3e-71 MDLHLGGYVASIEADVDLDNVFLEHSLSYSKYTTSRYFDDKDGLYEYRKSNIKNWGNYNF RGATYSYQGGLNDIRENQKNLSYKFDASLKEFEALGALHAVKSGFEFTSQRGSYEVLTPY VRYSNPSALPAGYVCASGDKTCINDDSFGGRGQFLKTKDYYGDVKNTLNLHKISLYIEDE MRFGKFKIRPGARIEKDSFNNDINIAPRLVSEYEFLDKNFLGFGLNRYYGRNFFAYKIFN DMQAHYKTYTRTAPNQEFTLDESDKNNRLSTDLKTPYDDELSLFYRGDIQNARLNLKYVK RKSKNEVVGMSRSKVGLPALSGLANEYYVYMNKGRSNTDITTFSIQNIEPLMLMGIENDL EFSVTYTHKKKNFSSYTDIDIDDPVYYEGSVIKKGDLPVIAFYTPVIARLGHNINFSSFN ISNFITYTGKTNTLISGYDRALGMRKYSKFKLPSYVTWDMRVGFEQKIAKDLRFFTNLTI NNILNKKHAIEAGTYDGKVYYDYDLGRNFWLEAGVRW >gi|257442653|gb|ACYG01000022.1| GENE 101 118163 - 118813 818 216 aa, chain - ## HITS:1 COG:STM3193 KEGG:ns NR:ns ## COG: STM3193 COG0526 # Protein_GI_number: 16766493 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 3 216 6 222 223 173 44.0 2e-43 MKIAKFFKALAAVCLLCIGANALEVGVNYQVLQKPLNVPKNSVVKIFNYECPHCYAFDRT VTPQLMKKLEGTEFLPWHLKTKGVFGQTASGIFAALIVIDEKDDVSLLSDESKFKKAKFA IYKAIHDKKDDFGGGSDKQRFIKTALDAAGVSMSEYEAALASKKAQALLAQWDAGYEVAV ISGVPAFVVSGKYLLNTASFGSVDEMVAAVKELLAK Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:14:48 2011 Seq name: gi|257442648|gb|ACYG01000023.1| Campylobacter gracilis RM3268 contig00047, whole genome shotgun sequence Length of sequence - 2450 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 117 - 512 409 ## gi|257458977|ref|ZP_05624097.1| hypothetical protein CAMGR0001_1910 - Prom 544 - 603 3.5 2 2 Op 1 . - CDS 845 - 1141 255 ## gi|257459949|ref|ZP_05625054.1| hypothetical protein CAMGR0001_2496 3 2 Op 2 . - CDS 1165 - 1461 215 ## gi|257459950|ref|ZP_05625055.1| putative lipoprotein 4 2 Op 3 . - CDS 1458 - 2351 613 ## gi|257459951|ref|ZP_05625056.1| putative transcriptional activator - Prom 2390 - 2449 2.4 Predicted protein(s) >gi|257442648|gb|ACYG01000023.1| GENE 1 117 - 512 409 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458977|ref|ZP_05624097.1| ## NR: gi|257458977|ref|ZP_05624097.1| hypothetical protein CAMGR0001_1910 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1910 [Campylobacter gracilis RM3268] # 1 129 1 137 137 214 88.0 2e-54 MTTMYVGFWLSSDKYNFDFSDLILCGEIEKNKIGDINKRRGEVINRCNWSCCTAKKECVF TSDALKDLYEILKTNFGDIKKRISELNLTVNIYVAVDTTEKDDVYAIDFSKEMIKMCAEL NADVCVDGIYY >gi|257442648|gb|ACYG01000023.1| GENE 2 845 - 1141 255 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459949|ref|ZP_05625054.1| ## NR: gi|257459949|ref|ZP_05625054.1| hypothetical protein CAMGR0001_2496 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2496 [Campylobacter gracilis RM3268] # 1 98 1 98 98 178 100.0 1e-43 MKIVKLLIFLIFYTLILLYFTLPRLGARPDLIFINLNSLSKDDLNKDEFHRELNSSDWFL RKDGNISAVEPEEVRSILKDENSTVLFGIYSEAYTFYH >gi|257442648|gb|ACYG01000023.1| GENE 3 1165 - 1461 215 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459950|ref|ZP_05625055.1| ## NR: gi|257459950|ref|ZP_05625055.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 98 1 98 98 174 100.0 2e-42 MNKFKIILCFVACLLIVLIACGFYITKLENDKFEREILPRMFLLKAYREKDIKYISELED AYSWYLCNYENNDCIIVSGKELQKIIETHNAILFAFKK >gi|257442648|gb|ACYG01000023.1| GENE 4 1458 - 2351 613 297 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459951|ref|ZP_05625056.1| ## NR: gi|257459951|ref|ZP_05625056.1| putative transcriptional activator [Campylobacter gracilis RM3268] putative transcriptional activator [Campylobacter gracilis RM3268] # 1 297 34 330 330 574 100.0 1e-162 MSLAANLDVLNDPSADIFKKQRAAQDIANQMGVKVKFANLNRGSGGKFNSDDPNAVYINT KHISNAKEFMTSLRHELVHRSDNKRGSFIPKDPAQNQFATNYALGMLSMSEKALRLNGRS LNDYSPKVNPNDKTVIADTRYFYSLDQRKSDDLDLVYFNKTHEKFTYDAAVEYKGDKKSP HWVGVGAHGSEGHFVDLRDDNKFKGIGVTPVSQLAADIKKFDPQVDSVTLYMCFSGKDGK NTISVAQDLANQLGVPVYGYPNKFYFNGLFPSLSSPAYFGFGGNGEIKFLPENEGHK Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:16:18 2011 Seq name: gi|257442393|gb|ACYG01000024.1| Campylobacter gracilis RM3268 contig00005, whole genome shotgun sequence Length of sequence - 203752 bp Number of predicted genes - 190, with homology - 187 Number of transcription units - 84, operones - 39 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 567 - 782 128 ## COG2510 Predicted membrane protein + Prom 996 - 1055 1.9 2 2 Tu 1 . + CDS 1272 - 1658 550 ## CHAB381_1343 putative GTP pyrophosphokinase + Term 1776 - 1829 2.0 3 3 Op 1 . + CDS 2450 - 3649 1098 ## CHAB381_1708 major outer membrane protein + Term 3668 - 3716 8.5 4 3 Op 2 . + CDS 3725 - 4306 588 ## CHAB381_1709 putative cytochrome c family protein 5 3 Op 3 . + CDS 4317 - 4859 515 ## COG0693 Putative intracellular protease/amidase + Term 4885 - 4933 2.8 6 4 Tu 1 . - CDS 5463 - 6158 338 ## gi|257459961|ref|ZP_05625065.1| hypothetical protein CAMGR0001_0371 - Prom 6372 - 6431 4.9 + Prom 6311 - 6370 5.1 7 5 Op 1 1/0.176 + CDS 6400 - 7146 1065 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 8 5 Op 2 . + CDS 7163 - 8857 1683 ## COG1757 Na+/H+ antiporter + Term 8894 - 8923 1.4 9 6 Tu 1 . + CDS 9352 - 9543 176 ## + Term 9629 - 9666 -0.1 10 7 Tu 1 . - CDS 10460 - 11662 970 ## COG0796 Glutamate racemase - Prom 11688 - 11747 7.1 + Prom 11631 - 11690 6.7 11 8 Tu 1 . + CDS 11858 - 12541 584 ## COG0790 FOG: TPR repeat, SEL1 subfamily 12 9 Op 1 . - CDS 13311 - 14165 1120 ## COG0648 Endonuclease IV - Prom 14231 - 14290 4.7 - Term 14289 - 14315 0.1 13 9 Op 2 . - CDS 14534 - 15028 509 ## CHAB381_0244 hypothetical protein - Prom 15123 - 15182 78.1 + TRNA 15106 - 15180 56.1 # Glu TTC 0 0 14 10 Op 1 . + CDS 15424 - 16161 530 ## PROTEIN SUPPORTED gi|157165010|ref|YP_001467761.1| spore coat polysaccharide biosynthesis protein spsC-like protein 15 10 Op 2 1/0.176 + CDS 16145 - 17344 1198 ## COG0477 Permeases of the major facilitator superfamily 16 11 Op 1 16/0.000 + CDS 17447 - 19270 2174 ## COG0441 Threonyl-tRNA synthetase 17 11 Op 2 . + CDS 19267 - 19788 331 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 + Term 19823 - 19870 7.4 + Prom 19862 - 19921 9.7 18 12 Op 1 5/0.000 + CDS 20023 - 20796 648 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 19 12 Op 2 1/0.176 + CDS 20800 - 21900 671 ## COG0451 Nucleoside-diphosphate-sugar epimerases 20 12 Op 3 . + CDS 21897 - 23687 1209 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 21 12 Op 4 . + CDS 23680 - 24408 512 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 22 12 Op 5 . + CDS 24410 - 25195 676 ## Nitsa_2035 hypothetical protein 23 12 Op 6 . + CDS 25192 - 26121 741 ## Saut_1501 NAD-dependent epimerase/dehydratase 24 12 Op 7 . + CDS 26118 - 27449 1096 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 25 12 Op 8 . + CDS 27498 - 27758 231 ## gi|257459988|ref|ZP_05625092.1| hypothetical protein CAMGR0001_0399 26 12 Op 9 . + CDS 27751 - 29589 628 ## gi|257459989|ref|ZP_05625093.1| putative membrane protein 27 12 Op 10 . + CDS 29642 - 29809 93 ## gi|257459990|ref|ZP_05625094.1| carboxy- processing protease 28 12 Op 11 . + CDS 29760 - 31595 590 ## COG1835 Predicted acyltransferases 29 12 Op 12 . + CDS 31596 - 31964 322 ## Nitsa_2038 GtrA family protein 30 12 Op 13 11/0.000 + CDS 31966 - 32898 945 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 31 12 Op 14 . + CDS 32891 - 33853 452 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 32 12 Op 15 . + CDS 33883 - 35241 162 ## BC5266 heteropolysaccharide repeat-containing protein + Prom 35267 - 35326 9.9 33 13 Op 1 46/0.000 + CDS 35380 - 35571 269 ## PROTEIN SUPPORTED gi|154149059|ref|YP_001406081.1| ribosomal protein L35 34 13 Op 2 . + CDS 35672 - 36028 523 ## PROTEIN SUPPORTED gi|222823081|ref|YP_002574654.1| 50S ribosomal protein L20 + Term 36038 - 36073 5.1 + Prom 36067 - 36126 3.5 35 14 Tu 1 . + CDS 36157 - 38118 2362 ## Lebu_0006 hypothetical protein + Term 38202 - 38248 -0.7 - Term 38563 - 38605 5.5 36 15 Op 1 1/0.176 - CDS 38613 - 39326 1011 ## COG1651 Protein-disulfide isomerase 37 15 Op 2 7/0.000 - CDS 39378 - 41198 1985 ## COG3276 Selenocysteine-specific translation elongation factor 38 15 Op 3 . - CDS 41191 - 42801 1553 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] - Prom 42824 - 42883 4.7 + Prom 42771 - 42830 5.5 39 16 Op 1 3/0.000 + CDS 42968 - 43438 557 ## COG1145 Ferredoxin 40 16 Op 2 . + CDS 43401 - 44651 1052 ## COG1145 Ferredoxin 41 16 Op 3 . + CDS 44651 - 45520 674 ## CCV52592_0537 hypothetical protein + Term 45533 - 45583 -0.9 + Prom 45646 - 45705 10.0 42 17 Op 1 . + CDS 45773 - 45970 310 ## gi|257460007|ref|ZP_05625111.1| Tat pathway signal sequence 43 17 Op 2 5/0.000 + CDS 45981 - 46520 412 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 44 17 Op 3 16/0.000 + CDS 46569 - 48902 2089 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 45 17 Op 4 . + CDS 48912 - 49469 583 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 + Term 49475 - 49520 5.0 + Prom 49596 - 49655 7.2 46 18 Op 1 . + CDS 49711 - 50328 714 ## CHAB381_1496 hypothetical protein 47 18 Op 2 . + CDS 50325 - 51236 839 ## CCC13826_2144 hypothetical protein 48 18 Op 3 . + CDS 51292 - 51876 710 ## COG1279 Lysine efflux permease 49 18 Op 4 . + CDS 51919 - 52404 693 ## gi|257460015|ref|ZP_05625119.1| hypothetical protein CAMGR0001_0426 + Prom 53369 - 53428 7.2 50 19 Tu 1 . + CDS 53454 - 54665 1763 ## COG1748 Saccharopine dehydrogenase and related proteins + Prom 54800 - 54859 7.5 51 20 Tu 1 . + CDS 54957 - 56123 1102 ## COG0477 Permeases of the major facilitator superfamily + Term 56128 - 56178 -0.6 + Prom 56200 - 56259 5.3 52 21 Tu 1 . + CDS 56285 - 56659 566 ## CFF8240_0286 hypothetical protein + Term 56712 - 56746 -1.0 + Prom 56737 - 56796 6.4 53 22 Tu 1 . + CDS 56909 - 59089 1816 ## COG1287 Uncharacterized membrane protein, required for N-linked glycosylation + Term 59130 - 59160 -0.3 + Prom 59148 - 59207 6.0 54 23 Tu 1 . + CDS 59345 - 59929 706 ## CCV52592_1443 hypothetical protein + Term 59984 - 60036 0.5 + Prom 60050 - 60109 4.8 55 24 Tu 1 . + CDS 60285 - 62567 2690 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 62589 - 62630 6.1 + Prom 63943 - 64002 3.2 56 25 Op 1 4/0.000 + CDS 64055 - 65614 1215 ## COG1696 Predicted membrane protein involved in D-alanine export 57 25 Op 2 2/0.000 + CDS 65615 - 66925 1318 ## COG2845 Uncharacterized protein conserved in bacteria 58 25 Op 3 . + CDS 66918 - 67970 812 ## COG2755 Lysophospholipase L1 and related esterases 59 26 Tu 1 . - CDS 68112 - 68324 115 ## gi|257460035|ref|ZP_05625139.1| hypothetical protein CAMGR0001_0446 - Prom 68382 - 68441 5.5 60 27 Tu 1 . + CDS 68418 - 69128 743 ## Shel_06530 hypothetical protein + Term 69172 - 69243 3.9 - Term 69718 - 69761 4.2 61 28 Tu 1 . - CDS 69770 - 70336 949 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 70358 - 70417 13.0 + Prom 70345 - 70404 10.5 62 29 Tu 1 . + CDS 70425 - 71165 1063 ## COG1651 Protein-disulfide isomerase + Term 71229 - 71263 -0.7 63 30 Tu 1 . - CDS 71649 - 72485 645 ## COG1672 Predicted ATPase (AAA+ superfamily) - Prom 72530 - 72589 6.0 + Prom 72504 - 72563 4.3 64 31 Tu 1 . + CDS 72584 - 73900 1177 ## COG0520 Selenocysteine lyase + Term 73987 - 74034 -0.8 - Term 74466 - 74516 11.1 65 32 Op 1 . - CDS 74521 - 76344 1770 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 66 32 Op 2 . - CDS 76367 - 77143 1055 ## COG1968 Uncharacterized bacitracin resistance protein 67 32 Op 3 . - CDS 77130 - 77744 553 ## COG0352 Thiamine monophosphate synthase 68 32 Op 4 . - CDS 77737 - 78273 544 ## gi|257460050|ref|ZP_05625154.1| hypothetical protein CAMGR0001_0461 69 32 Op 5 16/0.000 - CDS 78333 - 79073 986 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 70 32 Op 6 34/0.000 - CDS 79085 - 79813 605 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 71 32 Op 7 . - CDS 79806 - 80510 677 ## COG0765 ABC-type amino acid transport system, permease component - Prom 80597 - 80656 6.5 + Prom 80481 - 80540 6.3 72 33 Op 1 . + CDS 80638 - 82146 1776 ## COG0591 Na+/proline symporter 73 33 Op 2 . + CDS 82139 - 83482 1590 ## COG4487 Uncharacterized protein conserved in bacteria + Term 83623 - 83664 -1.0 74 34 Tu 1 . - CDS 84006 - 84209 100 ## gi|257460057|ref|ZP_05625161.1| hypothetical protein CAMGR0001_0468 - Prom 84444 - 84503 3.1 75 35 Tu 1 . + CDS 84190 - 84846 604 ## CHAB381_0359 hypothetical protein + TRNA 85101 - 85177 95.4 # Met CAT 0 0 76 36 Op 1 . + CDS 85439 - 86749 1454 ## COG1301 Na+/H+-dicarboxylate symporters 77 36 Op 2 . + CDS 86779 - 87459 708 ## COG1794 Aspartate racemase + Term 87486 - 87546 5.3 + Prom 87636 - 87695 5.2 78 37 Tu 1 . + CDS 87780 - 91925 5180 ## COG0587 DNA polymerase III, alpha subunit + Term 92063 - 92110 -0.1 79 38 Op 1 . - CDS 93324 - 93935 807 ## COG0040 ATP phosphoribosyltransferase 80 38 Op 2 . - CDS 93932 - 94552 593 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 81 38 Op 3 . - CDS 94539 - 94871 406 ## CHAB381_1639 hypothetical protein 82 38 Op 4 . - CDS 94861 - 95874 1031 ## CFF8240_1148 hypothetical protein 83 38 Op 5 . - CDS 95874 - 96425 606 ## CHAB381_1641 hypothetical protein - Prom 96466 - 96525 8.2 + Prom 96457 - 96516 7.4 84 39 Op 1 . + CDS 96542 - 96829 342 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 85 39 Op 2 . + CDS 96840 - 97922 968 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 86 39 Op 3 1/0.176 + CDS 97922 - 98599 464 ## COG1286 Uncharacterized membrane protein, required for colicin V production 87 39 Op 4 1/0.176 + CDS 98596 - 99063 453 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 88 39 Op 5 3/0.000 + CDS 99161 - 100558 1523 ## COG1190 Lysyl-tRNA synthetase (class II) 89 39 Op 6 . + CDS 100561 - 101808 1658 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 101815 - 101853 7.3 + Prom 101819 - 101878 5.9 90 40 Op 1 . + CDS 101908 - 102939 1223 ## CCV52592_1352 hypothetical protein 91 40 Op 2 . + CDS 102939 - 103724 600 ## COG0169 Shikimate 5-dehydrogenase + Prom 104091 - 104150 8.8 92 41 Op 1 . + CDS 104203 - 104409 306 ## Despr_0568 hypothetical protein 93 41 Op 2 31/0.000 + CDS 104412 - 105935 1857 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 94 41 Op 3 . + CDS 105937 - 107043 1387 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 - Term 107571 - 107633 2.3 95 42 Op 1 . - CDS 107654 - 108622 902 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components 96 42 Op 2 . - CDS 108622 - 111354 2420 ## COG0612 Predicted Zn-dependent peptidases - Prom 111376 - 111435 4.2 97 43 Tu 1 . - CDS 111705 - 112301 811 ## COG0450 Peroxiredoxin - Prom 112329 - 112388 9.4 + Prom 112375 - 112434 10.4 98 44 Op 1 4/0.000 + CDS 112482 - 112766 514 ## COG1145 Ferredoxin + Term 112771 - 112815 8.8 + Prom 112795 - 112854 4.9 99 44 Op 2 . + CDS 112874 - 113287 519 ## COG0105 Nucleoside diphosphate kinase 100 44 Op 3 . + CDS 113297 - 113650 193 ## CHAB381_1489 hypothetical protein 101 44 Op 4 14/0.000 + CDS 113669 - 113815 245 ## PROTEIN SUPPORTED gi|223038613|ref|ZP_03608906.1| ribosomal protein L32 102 44 Op 5 16/0.000 + CDS 113820 - 114818 869 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 103 44 Op 6 . + CDS 114815 - 115813 926 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 104 45 Tu 1 . - CDS 116757 - 117680 856 ## CCV52592_0341 hypothetical protein - Prom 117721 - 117780 4.3 + Prom 117692 - 117751 6.2 105 46 Op 1 . + CDS 117775 - 120066 2694 ## CHAB381_1505 hypothetical protein 106 46 Op 2 3/0.000 + CDS 120079 - 120822 753 ## COG0344 Predicted membrane protein 107 46 Op 3 1/0.176 + CDS 120819 - 121136 295 ## COG1539 Dihydroneopterin aldolase 108 46 Op 4 40/0.000 + CDS 121213 - 121884 876 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 109 46 Op 5 1/0.176 + CDS 121923 - 123170 1108 ## COG0642 Signal transduction histidine kinase 110 46 Op 6 3/0.000 + CDS 123220 - 123465 362 ## COG1145 Ferredoxin 111 46 Op 7 . + CDS 123466 - 124908 1630 ## COG0248 Exopolyphosphatase - Term 124843 - 124883 -0.4 112 47 Tu 1 . - CDS 125006 - 126094 927 ## CCV52592_1819 hypothetical protein 113 48 Op 1 . - CDS 126170 - 126475 453 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 114 48 Op 2 . - CDS 126472 - 127647 1161 ## CCV52592_1841 hypothetical protein 115 48 Op 3 . - CDS 127665 - 128009 594 ## CCV52592_1840 hypothetical protein - Prom 128043 - 128102 6.1 + Prom 128070 - 128129 7.6 116 49 Tu 1 . + CDS 128153 - 130969 3591 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 131037 - 131084 0.8 - Term 131526 - 131555 -0.4 117 50 Op 1 . - CDS 131607 - 132743 1362 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 118 50 Op 2 34/0.000 - CDS 132769 - 133503 508 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 119 50 Op 3 31/0.000 - CDS 133503 - 134171 560 ## COG0765 ABC-type amino acid transport system, permease component 120 50 Op 4 9/0.000 - CDS 134168 - 134917 854 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 134937 - 134996 2.8 - Term 134949 - 135001 -0.4 121 50 Op 5 . - CDS 135011 - 135754 790 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 135965 - 136024 7.0 - Term 136389 - 136415 -0.6 122 51 Tu 1 . - CDS 136422 - 137972 1580 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 138021 - 138080 7.1 - Term 138205 - 138235 2.7 123 52 Op 1 . - CDS 138237 - 139064 872 ## COG0535 Predicted Fe-S oxidoreductases 124 52 Op 2 . - CDS 139064 - 139840 556 ## COG0348 Polyferredoxin 125 52 Op 3 . - CDS 139833 - 140693 911 ## COG0725 ABC-type molybdate transport system, periplasmic component 126 52 Op 4 4/0.000 - CDS 140766 - 141875 1192 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 127 52 Op 5 . - CDS 141872 - 142597 808 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 142645 - 142704 5.4 128 53 Op 1 9/0.000 - CDS 142799 - 143677 882 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 143697 - 143736 0.4 129 53 Op 2 . - CDS 143738 - 144643 948 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 144784 - 144843 3.1 130 54 Tu 1 . - CDS 144910 - 145104 59 ## 131 55 Op 1 1/0.176 + CDS 145022 - 146407 1517 ## COG1160 Predicted GTPases 132 55 Op 2 1/0.176 + CDS 146394 - 147365 1022 ## COG0703 Shikimate kinase 133 55 Op 3 . + CDS 147376 - 148344 1043 ## COG0180 Tryptophanyl-tRNA synthetase 134 55 Op 4 . + CDS 148355 - 148855 480 ## CCV52592_0205 hypothetical protein 135 55 Op 5 9/0.000 + CDS 148906 - 149172 512 ## COG3830 ACT domain-containing protein 136 55 Op 6 . + CDS 149182 - 150519 1913 ## COG2848 Uncharacterized conserved protein 137 55 Op 7 . + CDS 150545 - 150958 432 ## gi|257460136|ref|ZP_05625240.1| putative lipoprotein + Term 151034 - 151088 3.5 138 56 Tu 1 . + CDS 151394 - 151831 484 ## CCC13826_1473 hypothetical protein + Prom 151882 - 151941 3.7 139 57 Tu 1 . + CDS 152130 - 152543 172 ## gi|257460138|ref|ZP_05625242.1| conserved hypothetical protein + Term 152598 - 152647 3.6 + Prom 152668 - 152727 9.6 140 58 Tu 1 . + CDS 152747 - 153337 149 ## gi|257460139|ref|ZP_05625243.1| hypothetical protein CAMGR0001_0551 + Term 153504 - 153549 -0.8 141 59 Tu 1 . - CDS 153494 - 155470 2113 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 155510 - 155569 10.1 + Prom 155454 - 155513 7.6 142 60 Op 1 . + CDS 155540 - 155800 441 ## gi|257460141|ref|ZP_05625245.1| conserved hypothetical protein 143 60 Op 2 . + CDS 155797 - 156033 291 ## gi|257460142|ref|ZP_05625246.1| conserved hypothetical protein 144 60 Op 3 . + CDS 156033 - 156497 547 ## CHAB381_1704 hypothetical protein - Term 156887 - 156915 -0.2 145 61 Tu 1 . - CDS 156961 - 157677 464 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 157793 - 157852 4.3 - Term 158013 - 158051 2.1 146 62 Tu 1 . - CDS 158177 - 158713 846 ## COG1267 Phosphatidylglycerophosphatase A and related proteins - Prom 158900 - 158959 6.0 147 63 Op 1 1/0.176 - CDS 159453 - 161258 1536 ## COG2046 ATP sulfurylase (sulfate adenylyltransferase) 148 63 Op 2 3/0.000 - CDS 161236 - 162099 705 ## COG0784 FOG: CheY-like receiver 149 63 Op 3 . - CDS 162096 - 163418 1214 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Prom 163439 - 163498 7.9 + Prom 163553 - 163612 5.6 150 64 Op 1 . + CDS 163636 - 164943 1326 ## COG0422 Thiamine biosynthesis protein ThiC 151 64 Op 2 . + CDS 164940 - 166034 1478 ## COG0489 ATPases involved in chromosome partitioning + Term 166051 - 166118 9.1 + Prom 166573 - 166632 6.3 152 65 Op 1 . + CDS 166859 - 167884 1107 ## CHAB381_0803 hypothetical protein 153 65 Op 2 . + CDS 167912 - 168943 750 ## Sdel_2112 hypothetical protein 154 65 Op 3 . + CDS 168958 - 170154 1356 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 170404 - 170450 -0.9 + Prom 170429 - 170488 8.4 155 66 Op 1 . + CDS 170514 - 170900 404 ## gi|257460160|ref|ZP_05625264.1| hypothetical protein CAMGR0001_0572 156 66 Op 2 . + CDS 170919 - 172046 1345 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 172049 - 172084 2.1 + Prom 172064 - 172123 3.0 157 67 Op 1 . + CDS 172268 - 173860 1786 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 158 67 Op 2 . + CDS 173853 - 174056 362 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 159 67 Op 3 . + CDS 174138 - 174329 101 ## gi|257460165|ref|ZP_05625269.1| hypothetical protein CAMGR0001_0577 + Term 174337 - 174386 1.2 160 68 Tu 1 . + CDS 175029 - 175823 1092 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 + Prom 176228 - 176287 5.3 161 69 Tu 1 . + CDS 176353 - 177114 952 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis - Term 177352 - 177390 4.3 162 70 Tu 1 . - CDS 177414 - 178031 618 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 178235 - 178294 4.3 + Prom 178099 - 178158 3.8 163 71 Op 1 . + CDS 178251 - 179381 1201 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 164 71 Op 2 . + CDS 179374 - 180228 388 ## gi|257460175|ref|ZP_05625279.1| hypothetical protein CAMGR0001_0587 165 71 Op 3 . + CDS 180222 - 181589 758 ## COG0352 Thiamine monophosphate synthase 166 71 Op 4 . + CDS 181586 - 181807 75 ## gi|257460177|ref|ZP_05625281.1| hypothetical protein CAMGR0001_0589 167 71 Op 5 . + CDS 181768 - 182784 220 ## gi|257460178|ref|ZP_05625282.1| hypothetical protein CAMGR0001_0590 168 72 Tu 1 . - CDS 182813 - 183670 793 ## CHAB381_1592 hypothetical protein - Prom 183742 - 183801 2.8 - Term 183853 - 183884 -0.6 169 73 Tu 1 . - CDS 183891 - 184151 123 ## CCV52592_1178 hypothetical protein - Prom 184222 - 184281 5.6 - Term 184578 - 184615 1.6 170 74 Op 1 1/0.176 - CDS 184710 - 185396 516 ## COG0284 Orotidine-5'-phosphate decarboxylase 171 74 Op 2 17/0.000 - CDS 185393 - 186421 855 ## COG0781 Transcription termination factor 172 74 Op 3 . - CDS 186423 - 186893 761 ## COG0054 Riboflavin synthase beta-chain - Prom 186937 - 186996 4.3 + Prom 186885 - 186944 4.5 173 75 Tu 1 . + CDS 187027 - 187218 76 ## + Prom 187427 - 187486 9.0 174 76 Tu 1 . + CDS 187510 - 188133 341 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 188187 - 188235 -0.9 - Term 188254 - 188305 8.2 175 77 Tu 1 . - CDS 188381 - 188962 728 ## COG1280 Putative threonine efflux protein - Prom 188987 - 189046 4.6 176 78 Op 1 . - CDS 189489 - 190856 1356 ## COG0733 Na+-dependent transporters of the SNF family 177 78 Op 2 . - CDS 190866 - 192419 1277 ## COG0799 Uncharacterized homolog of plant Iojap protein 178 79 Tu 1 . - CDS 192521 - 192844 88 ## gi|257460192|ref|ZP_05625296.1| putative pentapeptide repeat protein - Prom 192893 - 192952 1.8 179 80 Tu 1 . - CDS 193317 - 194567 1678 ## COG0172 Seryl-tRNA synthetase - Prom 194679 - 194738 5.7 + Prom 194515 - 194574 9.6 180 81 Tu 1 . + CDS 194708 - 195457 990 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Term 195465 - 195504 -0.9 + Prom 195809 - 195868 7.7 181 82 Op 1 . + CDS 195980 - 196249 161 ## gi|257460196|ref|ZP_05625300.1| hypothetical protein CAMGR0001_0608 182 82 Op 2 . + CDS 196239 - 196838 595 ## COG0310 ABC-type Co2+ transport system, permease component 183 82 Op 3 . + CDS 196835 - 197398 519 ## CHAB381_0542 hypothetical protein 184 82 Op 4 . + CDS 197395 - 198042 594 ## CCV52592_0555 hypothetical protein 185 82 Op 5 . + CDS 198039 - 198815 303 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 - TRNA 198871 - 198947 39.0 # Glu CTC 0 0 + Prom 199123 - 199182 2.8 186 83 Op 1 . + CDS 199206 - 199904 462 ## gi|257460201|ref|ZP_05625305.1| hypothetical protein CAMGR0001_0615 187 83 Op 2 . + CDS 199908 - 200591 467 ## CAP2UW1_1710 hypothetical protein 188 83 Op 3 . + CDS 200602 - 201015 375 ## gi|257460203|ref|ZP_05625307.1| hypothetical protein CAMGR0001_0617 + Term 201073 - 201139 5.3 - Term 201385 - 201437 15.7 189 84 Op 1 . - CDS 201472 - 202626 801 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 190 84 Op 2 . - CDS 202678 - 203265 748 ## CHAB381_1591 conjugal transfer protein + TRNA 203394 - 203469 88.5 # Val TAC 0 0 + TRNA 203530 - 203606 84.9 # Asp GTC 0 0 + TRNA 203618 - 203693 79.6 # Lys TTT 0 0 Predicted protein(s) >gi|257442393|gb|ACYG01000024.1| GENE 1 567 - 782 128 71 aa, chain - ## HITS:1 COG:NMB1840 KEGG:ns NR:ns ## COG: NMB1840 COG2510 # Protein_GI_number: 15677676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis MC58 # 1 71 72 142 143 85 69.0 2e-17 MILSGLATGASWLAYFKALQIGKAYQVAPIDKLSVVLVVIIAVIFLGERPSLREWLALAL IGAGVMMLAFK >gi|257442393|gb|ACYG01000024.1| GENE 2 1272 - 1658 550 128 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1343 NR:ns ## KEGG: CHAB381_1343 # Name: not_defined # Def: putative GTP pyrophosphokinase # Organism: C.hominis_BAA-381 # Pathway: not_defined # 31 128 33 130 130 97 46.0 2e-19 MKNFIFSALLALGIAGCAVNTAPTPAGNLRSLKSEIVNYTRQSSTAYVYTFKDLSSGELY TAHASRYYAAAGDTAYISTASGAITDMRVISRKAGSVAPRAYDIGKIETKQMHKNDAIAV PESENISF >gi|257442393|gb|ACYG01000024.1| GENE 3 2450 - 3649 1098 399 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1708 NR:ns ## KEGG: CHAB381_1708 # Name: not_defined # Def: major outer membrane protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 24 399 24 421 421 335 52.0 2e-90 MKLVKLSLAAAVAAGALAMSASAVPLEEAIKDVDLNGYARMRYTHDHLKNETNSNKGVWE FKSEVDFKAKIDDNFFGVVGVRFLDRDNGESLSSSNSQYHGAQNPSDKDSDFDIAKAYLG YTIGGTTIAVGRQGIGSFFTDDMYGDGVKITSTDIEGLTISGFWMDSLENDGDISSLDWG AAVDNKLTTDHNLYGIGFMGSYDPVSFQLWYNALEDVAQLFAAELALNFDISDDFNLGVK GQYAFSDFDGDYKDAGASDADFWAAEANAGFFGVDLAAGYLKFEPDDKDKVSFVSFEDQG SFISPGEELLDYRNFSGENHYWYVVAGYTIPDTGIRIGADYLDGKADGDNAYEVVGRISY KYNEKLSFKTWYSHYKIDDAAGGLDEKKDRIRFEAKYSF >gi|257442393|gb|ACYG01000024.1| GENE 4 3725 - 4306 588 193 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1709 NR:ns ## KEGG: CHAB381_1709 # Name: not_defined # Def: putative cytochrome c family protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 193 1 187 187 182 55.0 8e-45 MKIFKISFLACFFAFSLNAADKASDDTYVFEAKGEFAKELKSLIEKHSKDENVTVNIYKN TPNAKGNIIGGGTKINRNINYIKEKGKVIYDANCASCHGSEGQKRAYGSSRKLKDLSAKE IAIAISSYTSDGQYGKKMKYIMQPIAAKTTAEEVGYIIGYLKGDDEFLYDSPSRASGNTE ISTAPSEQGSYLK >gi|257442393|gb|ACYG01000024.1| GENE 5 4317 - 4859 515 180 aa, chain + ## HITS:1 COG:CAC1629 KEGG:ns NR:ns ## COG: CAC1629 COG0693 # Protein_GI_number: 15894907 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 1 180 1 180 188 147 44.0 1e-35 MKVAIVLANGFEELEAISIIDILRRADIDALAVGLEKKCVHGTHGIELVADEILDDIKVS EFSMIVLPGGLPGAENLAKSEKLGKILRDFDANNTKIGAICAAPWALATAGVLKSSYTCY PGFENQIAHPGYTNAANVVKDQNIMTSKGPATAMEFALQIVRELKGEQVYFKLKSDLLFK >gi|257442393|gb|ACYG01000024.1| GENE 6 5463 - 6158 338 231 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257459961|ref|ZP_05625065.1| ## NR: gi|257459961|ref|ZP_05625065.1| hypothetical protein CAMGR0001_0371 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0371 [Campylobacter gracilis RM3268] # 33 231 1 199 199 357 100.0 4e-97 MSKFIRFIFVSICVCATYAGLKHAFMLFITWLMFSGVYFDGPGALLAIPLTFLSSSVIFD YYCIALGSHLLFLSLLKGRGVKTRWILPLFFLITLAFCSFCVLIGHEDYQRINALFALLL ISPFTLIAYAIVTTVILAKNKISDYYPILVAIIFVPIHAASIGIWGLERIYFGVFLNATI LGIFYFTAKIGRVNLIAHRPTPDKMQNSKDRVIKTIQSSATLLNNDILKKR >gi|257442393|gb|ACYG01000024.1| GENE 7 6400 - 7146 1065 248 aa, chain + ## HITS:1 COG:PA4907 KEGG:ns NR:ns ## COG: PA4907 COG4221 # Protein_GI_number: 15600100 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Pseudomonas aeruginosa # 1 247 1 251 253 266 54.0 3e-71 MKNTAFITGATSGFGEAISRALSAQGYKIVALGRRKERLQKLAGELGNTHIIAADIRDKA AVFDAVSALPENFKDVEVLVNNAGLALGLEGIAQTPVEDLETMVDTNIKGVLYSTKAVLP LMIARKSGYIFNLGSTAGAWPYPGSHVYGASKAFIKQFSRNIRNDLRGTGIRVTEIAPGI CKSEFSEVRFKGDVARAAAVYEGVDAILPEDIAQIMLSCLAMPHRVNINVVEAMATQQSW AGLFIEKH >gi|257442393|gb|ACYG01000024.1| GENE 8 7163 - 8857 1683 564 aa, chain + ## HITS:1 COG:Cj0832c KEGG:ns NR:ns ## COG: Cj0832c COG1757 # Protein_GI_number: 15792170 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Campylobacter jejuni # 1 562 1 576 577 605 57.0 1e-173 MKKILLLMFLSVAAFAVDDATRQHNAELFGIWTLVPPVVAIALAFITKEVILSLFIGVFS GTYMLAVVGNNPISALVGSFTDLVARVVGSMASKGNAGVLLQVLCIGGVVALISRTGGTK AVALWISKRAKTGISAQISTWIMGLFVFFDDYANALIVGPVMRPITDKFRVSREKLAFII DATAAPIAGIALISTWVGLEVSLIRAGYDQIGVQNVNAFSIFVQTMPYRFYNLFMLAFVV YVAFMRRDFGPMLSAERRAASGEIHSKNSNIAELEDKTLEPKEGIKPQASNAVIPLIVLI CGAFASFYFSGLSKLEGDALAAAKASPLSFATLQATFGNANSSVALFQAALLATVVSIFM SVYRKIFDVREAISTWIKGWKTMIVTIVILLLAWSLSSVIKELGTSRYLVDMLSQNTPKF LLPVAIFVLGSFISFSTGTSYGTMGILMPLAIPLANAVGLHYGLSGDALHAYMIVNISGV LTGAIFGDHCSPISDTTILSSMGAGCDHIEHVKTQMPYALSVGAVAVVAGYLPVALGLSV WIALPMGLAVTWALVRFAGKKIEE >gi|257442393|gb|ACYG01000024.1| GENE 9 9352 - 9543 176 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAYSVEYYRSHLDEAKAIIEKYKEKVPADENSVEAVNLRHAHDAVFLSRSKNRLVIPDAP RSN >gi|257442393|gb|ACYG01000024.1| GENE 10 10460 - 11662 970 400 aa, chain - ## HITS:1 COG:BS_yrpC KEGG:ns NR:ns ## COG: BS_yrpC COG0796 # Protein_GI_number: 16079734 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Bacillus subtilis # 1 222 1 226 265 174 41.0 4e-43 MKIAFFDSGIGGLSVLAEALQRFSGAEFLYFADEDHVPYGTKSRAEIVRLSLDAVGFLVS RGADGVVVACNTATSAAISELRGAFSVPVIGMEPAVKLAADSFGARPTLLIATPLTISGE KLARLVGRLECETWSLALPRLVEFAQDLEFDSPAVRAYLSEELAKFELARLGSLVLGCTH FNYFKDVLREILPPHVRIIDGIDGTLNRLASELGGGLKLARGEDLPSRAAKFNAGGDAKF DTNSSAQAHKFDAEGRDAGGRQSIKGKSKQDEGVDKSARSEQDAGGGNESYVGKNNAEEC CKSGGGSAGDAHDVEQCGEDKRRMSPRAVDANSQLKLYSRGGADLSLEFKPRGEGTGISR VNYPNGNSVEYFCSGRALNAAQLRKVELFLKRLDAMRGIG >gi|257442393|gb|ACYG01000024.1| GENE 11 11858 - 12541 584 227 aa, chain + ## HITS:1 COG:jhp0220 KEGG:ns NR:ns ## COG: jhp0220 COG0790 # Protein_GI_number: 15611290 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori J99 # 73 199 219 341 355 79 39.0 8e-15 MKKSLFALAFTACFALGASELETLEKECNDGNMESCLRAALQYEDNTKTLKLLEKTCDGG YEPSCLVMSIRMMQENPKKGIEYHEKRCDAGDATYCGLLGSMYSDGDGVEKDISKAIIYH DKACNLGQKLSALSCSMLAEMYRKGDGVKINLMKAAIYDKKGCDIADELASCYNFALFNY NSNDKSKAAQYYKKACDLGKNKNSLFMNPSEFKELWQKSCDMYELLK >gi|257442393|gb|ACYG01000024.1| GENE 12 13311 - 14165 1120 284 aa, chain - ## HITS:1 COG:STM2203 KEGG:ns NR:ns ## COG: STM2203 COG0648 # Protein_GI_number: 16765533 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Salmonella typhimurium LT2 # 1 279 1 279 285 341 59.0 9e-94 MKRIGAHVSASGGVSNAPLNAAKIGADAFAMFVKNQRRWDAPPLSTKEIAAFKDALKQSG IRAEHVLVHDSYLINLGHPREAEREKSLNAFIDEIRRCEALGLRLLNFHPGSHLNEISAQ VCLDNIAESLNFAIANTSGVKLVLEDTAGQGSNLGYDFAQLAYVIDKISNKDRIGVCIDT CHAFAAGYDLHSRQAYERTMSEFDRTIGYKFLSGMHLNDTKNELGVRKDRHESLGRGFLG LGAFENIMNDPNIDEIPLILETIDDSLWAEEIALLRSMQGRRKA >gi|257442393|gb|ACYG01000024.1| GENE 13 14534 - 15028 509 164 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0244 NR:ns ## KEGG: CHAB381_0244 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 17 163 28 165 166 130 46.0 3e-29 MKCSFLAPLALSLLFAGCATTALKPASTQAVNFTVISPLTRTSDAGFMRKFKNQTEVQIY ASGISVLSLVLKGDKICMNGACDDELVFNKKFFGAEHYRGLLGQILDGKPIFGGSDAGER RCLTQSLQDGSIDYKVCRDKDGGGRSISFADAKRGVKIKIRELL >gi|257442393|gb|ACYG01000024.1| GENE 14 15424 - 16161 530 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165010|ref|YP_001467761.1| spore coat polysaccharide biosynthesis protein spsC-like protein [Campylobacter concisus 13826] # 1 234 1 236 246 208 47 1e-52 MQNFKEYVNEILKNHLGERVTSFSFEGEKYWLKQPELRIRGGLLTKIFKANPKAAFDYEA LKCESLYAAGAPVPQPVLQDESFFVLKDGGTPVDEVLKSSDEAACVALIEGYAAALAQLH SRGFIHGRPALRDILVKNGEMKFIDFENRGERGDLQKAKMRDFLLFVYDLCREGLSEDLV RAAIRTYASSGGQDVVQSAWATVLALRPIYFIARLLPQKFKDLNALVRTFELCLKIIEEN DGQTK >gi|257442393|gb|ACYG01000024.1| GENE 15 16145 - 17344 1198 399 aa, chain + ## HITS:1 COG:Cj0035c KEGG:ns NR:ns ## COG: Cj0035c COG0477 # Protein_GI_number: 15791434 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 7 398 10 400 400 356 55.0 5e-98 MVKQSKFAKFKLVIILAYMSALAPLSTDMYLPALEKVKASFATSEFYAQLSVASFFIAFA LGQLVYGPLSDKFGRKKPLYAGILLFICASLACVSFDNIYAFIFFRFLQALGGCAGVVLA RAVINDKFELHEAAAMFALMMVVGSLAPMLAPTLGGFVLDFFSWQAIFAILFALGILLFA FIFFGLDESAQIDETTTLSVKGVLGEYGIILRNKEFMRYTLGFAVAMSALFAYITGSSFI FLGYYGLGEHAFGVIFGINALGMTLVSALNAKLVQNREPTALLNFGLIAMLVTSLILLAC SMLDLPFICFEVSLFILLSSLGFVAPNATTLAMALYKDGNSGAASAVLGTAQFAIAGAIS FIVGAVGANKPFLLASVMVICAFCANAVYFLLRKKNQKF >gi|257442393|gb|ACYG01000024.1| GENE 16 17447 - 19270 2174 607 aa, chain + ## HITS:1 COG:Cj0206 KEGG:ns NR:ns ## COG: Cj0206 COG0441 # Protein_GI_number: 15791593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Campylobacter jejuni # 3 607 4 602 602 897 72.0 0 MSDIIAYKLNGEIYDTQSIGERASEAQPIYFDNSEDALKVIRHSCAHLLAQAVRELYPSA KFFVGPAIEDGFYYDMRVSKNGGEKLGEEDLKAIEKKMRALAEANLEIKKIASTKEAVAK KYANDDLKQEVLKRIPEGPVSLYAQGEFEDICRGPHVQNTKFLKNFALTRIAGAYLGGDE KREMLTRIYGVVFADKDSLKKHLTMLEEAKKRDHRKLGTEMKFFTFDEQIGAGLPIWLPA GTRMRIKLEGRLYRQLRKRGYEPVRGPEILKSDAWKISGHYSNYKENMYFTTIEEQEYGI KPMNCVGHIKVYQSEIRSYRDLPLKFCEYGVVHRHEKSGVLHGLFRVREFTQDDAHLFVM PSQIKENVYEILDFVELLMKAFGFEYELEISTKPQKAVGDDEVWDIATKALKDALDEKGL KYGLDEGGGAFYGPKIDIKITDALGRKWQCGTVQVDFNLPARFELGYIDENNEKKQPVML HRAILGSFERFVGILLEHTAGELPFWICPTQVSIVPIGEAHASYAKEILNLLRAADIDGE ILDRNETLNKRIRTAEKQKVPLIIVLGDNEVSARSVALRDRRAREQRNLGLDEFLNFVKA KLNEVNF >gi|257442393|gb|ACYG01000024.1| GENE 17 19267 - 19788 331 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 17 172 3 158 159 132 44 2e-29 MSREKEVFLNEDIPASEVRCIGDNGEVYGIISKAQALQIAEREGVDLVLIAPDAKPPVCK VMNYSKFRYQQEKKLKEAKKKQKIIEVKEIKLSAKIAQNDINYKVKHAKEFLSSGKHVKL RVFLKGREMSSPEIGVNLLNKIWDEFFAEVADRDKAPALEGRYVNMLITPKKA >gi|257442393|gb|ACYG01000024.1| GENE 18 20023 - 20796 648 257 aa, chain + ## HITS:1 COG:YPO3115 KEGG:ns NR:ns ## COG: YPO3115 COG1208 # Protein_GI_number: 16123280 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Yersinia pestis # 1 257 5 260 261 348 63.0 8e-96 MKVLILAGGFGTRLAEETSIRPKPMVEIGGRPILWHIMKIYSHYGFNEFVVLLGYKGYYI KEYFANYFLHRSDVTIDIKNNNMKIHKTLSEDWKVTLIDTGLDTMTGGRIKRAQEYVGDE SFMLTYGDGVSDVNIDELVKFHKSHGKSATMTAVQPEGRFGALDINNSSLITSFFEKPKG DGNWINAGFFVCEPKVFDYITEGDTTVFEQAPLSNLAKDGELCAFKHCGFWKPMDALRDK QVLEKLWDSGNAPWKKW >gi|257442393|gb|ACYG01000024.1| GENE 19 20800 - 21900 671 366 aa, chain + ## HITS:1 COG:STM2091 KEGG:ns NR:ns ## COG: STM2091 COG0451 # Protein_GI_number: 16765421 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 18 366 7 359 359 373 52.0 1e-103 MNSVIATQEVQNLYSGIYKGKTVLLTGHTGFKGSWLSLWLQRLGAKVIGYSLPAPTEPNH IRLLNLNIVQVIADIRDLAKLNEVFAAYKPDIVFHFAAQALVRPSYADPITTYETNVIGT LKVFEACRKAGVLAIVNITSDKAYENKEWVWGYRESDPMGGYDPYSSSKGCADILASSYR NSFFNEKDYGTKHQTLLATCRAGNVIGGGDWAQDRLICDVMRAAAKNEAVTIRNPHATRP WQHVLEPLGGYLLVGQKLLEGRKKFGSAWNFGPSDDGAIRVLDVLKSAKRYWDKIEFQIN SDINQPHEANLLKLDCSKAHALLGWKPVWDSETAFEKTVKWYKNFYENGTIDTEQNLNDY VKDMMR >gi|257442393|gb|ACYG01000024.1| GENE 20 21897 - 23687 1209 596 aa, chain + ## HITS:1 COG:TM0548 KEGG:ns NR:ns ## COG: TM0548 COG0028 # Protein_GI_number: 15643314 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Thermotoga maritima # 11 596 13 577 584 263 31.0 1e-69 MIKVSDFIAKFIAEHEDTAKTIFMVSGGGNMHLIDSLGKNENLEYVCNHHEQACAIAAEG YARVSNKIGIAYVTTGPGGTNAVTGVYGAWVDSIPMMIISGQVKFQTTIASQPELNLRQL GDQEVNIVDIVRPITKYAVMITDKNSIKFNLQKAVYEAKHGRPGPVWLDVPLDIQGAMVD EADLIEFEIPEAPKFDTKIPQVLDALKAAKRPVIIVGNGVTLAGANEEFLKLIEILKVPV IGTFARYDIVRNDHDLFFGRYGTIGNRAANFVVQNSDLIIAIGARLNIRAVSYNWEFFGR EAKKILVDIDQNELNKKTIAADIKIKSDAKVFISDLRSALKDELDFGFWLEICKNYRKNY PTIEPFRQNAKEWVDSYNFFDVLSNHKRDLVYVFGNGTACVSSYQSLRLYENQKVVVNSG CASMGYDLPAAIGACFANGKGNTICVTGEGSLQMNIQEFQTIIHHRLPIKIFVLNNAGYI SIRNTQNNFFKGHKVGSDKDSGVSFPDTVNLAQAYGFEACRIENQLNLKGELEEILSKPG AVVCEIMLSPTEKMEPKLSSEIKPDGKMISKPLEDMFPFLPREEFYKNMIIKPVDE >gi|257442393|gb|ACYG01000024.1| GENE 21 23680 - 24408 512 242 aa, chain + ## HITS:1 COG:lin2500 KEGG:ns NR:ns ## COG: lin2500 COG0647 # Protein_GI_number: 16801562 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Listeria innocua # 3 231 5 230 255 120 32.0 2e-27 MNKAVVFDLDGTIYFGSKIADFALQTIDELESNGYNVLFFTNNSTKTRFEILDKLIHMGI RTTVDKIYTSAYASAIFLQRKDLRNIFLVGSRGFKSELTNADINVEDEYSCEAVVIGLDL NFNYEILSRALIALQKSRRIIVANTDKNFPVENGLLRPGANAMLSAILGSIDEEIKLDIV GKPNPFMLEILCKDWGLDKQHIVVVGDRMESDMAMAKNFNCKGILVGNDITLLDVKNKIL RS >gi|257442393|gb|ACYG01000024.1| GENE 22 24410 - 25195 676 261 aa, chain + ## HITS:1 COG:no KEGG:Nitsa_2035 NR:ns ## KEGG: Nitsa_2035 # Name: not_defined # Def: hypothetical protein # Organism: N.salsuginis # Pathway: not_defined # 1 260 1 260 262 386 75.0 1e-106 MNVLEYEMIDILKRLKDEYGVFEIKAEYENEGSRQEELCRLKDITSKVGLPIIMKIGGVE AVTDIYNAITLGVNGIIAPMAETKFAVSKFVAAINTFVAEDNRNDIEFAINVETITCYEN LDDILSLENINTLTGITIGRVDFTASMGKNRDFADSDEMLKYCEDIYTKARAKGLKCGLG GAISAKSCDFIKYLISRGLLDKYETRKIVYHKDAINNMEAGILAGVEFELAWLKSKRRYY HRIKSEDEKRIEMLEKRLSNR >gi|257442393|gb|ACYG01000024.1| GENE 23 25192 - 26121 741 309 aa, chain + ## HITS:1 COG:no KEGG:Saut_1501 NR:ns ## KEGG: Saut_1501 # Name: not_defined # Def: NAD-dependent epimerase/dehydratase # Organism: S.autotrophica # Pathway: not_defined # 1 309 1 308 308 364 61.0 3e-99 MNLFITGGSGFIGSHLKKRLALNGNFNVFAPKSSELNLTDESAVDDFVRAHKIDTIVHLA NRGGGRNTLDMSNVTEYNLRIFFNIAKQKNKVAKIISFGSGAEYGKHKPIINAREDDYKE TLPLEEYGFYKAITSHYIEDCADNIIQLRLFGIYGEMENYRYKFITNAVVKNLLHLPITI NQNVFFDYMYVDDLLNVVEFYIENDARHKIYNASSGTKIDLLSLAALVNEASDFKSEIIV LNEGLNNEYTSDNSLLKSEMKDKFKLTPHSEAIGKIHKYFKQNFTSLDLDTIKEDPYLGK INEIWKGKK >gi|257442393|gb|ACYG01000024.1| GENE 24 26118 - 27449 1096 443 aa, chain + ## HITS:1 COG:YPO3113 KEGG:ns NR:ns ## COG: YPO3113 COG0399 # Protein_GI_number: 16123279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Yersinia pestis # 1 438 1 432 437 479 51.0 1e-135 MTPQELKQEILEKTKEYYRLVHEPVQHAKFEPGKSRVNYAGRVFDEHEMINLIDSSLDFW LTYGTYSKKFEKEFAKMLGVKWAFLVNSGSSANLLAFFALTSPLLKERRIKKGDEVITVA AGFPTTVAPIVQYGAVPVFIDMELEYFNIDHTKLELALSPKTKAVMVAHTLGNPFNIKAV KEFCDKHDLWLIEDNCDALGSLYDGKPTGTWGDIGTSSFYPPHHMTMGEGGATYTNNPLL KKIMLSMRDWGRDCWCDSGVDNTCGRRFSQKFGELPLGYDHKYVYSHFGFNLKASDMQAA VGCAQIEKFPSFVQRRRQNFKKLYDGLKDIKELILVKAQPHSEPSWFGFMMTVADGAKFS RNELSEHLEKAGVQTRNLFAGNMIKHPLFAGLKLGVDYKISGELKNTDKIMNDSFWVGVY PGMSDEKIEYIIKAIKEFISTKN >gi|257442393|gb|ACYG01000024.1| GENE 25 27498 - 27758 231 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459988|ref|ZP_05625092.1| ## NR: gi|257459988|ref|ZP_05625092.1| hypothetical protein CAMGR0001_0399 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0399 [Campylobacter gracilis RM3268] # 1 86 1 86 86 108 100.0 1e-22 MPNKAVLKLSVLFCIIVFLIYKVGKKIFIAYVDPTVDKYNYFKWVYYFMNQEKVFTFNFY LFYIFIISAFFSLILWYKIYKDNIDE >gi|257442393|gb|ACYG01000024.1| GENE 26 27751 - 29589 628 612 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459989|ref|ZP_05625093.1| ## NR: gi|257459989|ref|ZP_05625093.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 612 1 612 612 967 100.0 0 MNSILLKIKGFNFHICAKLAILALIIIQISFYFYGIFSDFKLANEFRYIDEQTILDNNKI VSNNQYIKENLCFSPNNINYKFNSYDNIFLSGNKGGFNFQNNPKFLVFDPYYRHISADTF KKFATHIENIGYNRDFNLTYDEAKESNSINRYGIDAFSHSYPMFGADTLNKLKEKTDFIA YNIFEQNIQILSRYYWEETPFMLNPINELDLGRNKSKIFSQYGFLSLYPIKFIMEKLGGI NVSNFEKTKNIVCMVYYTIAIGFIFLFFKDNYLRLIFIFLLSIRFFSVMYYSYHYAPTFF DTRHFFDLTIILFLFYATKFQNLSAIFKLICVFLALLSIFMASDFGLYIFIAALGTLIIE YGMDTVRNNKLIDIKKIFFILIYTIVGIIFFIKYPLMKNPSIKYFIDGFYSFNIPSFLFF LILLVVFIQWLMLVIFYKKLERSGHLLSYIFLLFYTNFLYTYLVWKPNISAVVFFIDVLP FIIILNLFPNKIKKAFSIISILIGMLLYIKFAIYYVWEIKNYNRIFETHKTYKWDHDRAG GIITTYPFDKFQNSIDLINKYSSNTNEVYMISKYDNILQFFSKKYSRLKYFELRSFLVSD IEYNEVLNLINN >gi|257442393|gb|ACYG01000024.1| GENE 27 29642 - 29809 93 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459990|ref|ZP_05625094.1| ## NR: gi|257459990|ref|ZP_05625094.1| carboxy- processing protease [Campylobacter gracilis RM3268] carboxy- processing protease [Campylobacter gracilis RM3268] # 1 55 1 55 55 80 100.0 3e-14 MKERRFFDIYENYWYNENVKQRIPKLETLSKLFNEVKENYELIDSRGLLNVYKKK >gi|257442393|gb|ACYG01000024.1| GENE 28 29760 - 31595 590 611 aa, chain + ## HITS:1 COG:SMa1016 KEGG:ns NR:ns ## COG: SMa1016 COG1835 # Protein_GI_number: 16263003 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Sinorhizobium meliloti # 288 489 75 290 424 64 28.0 6e-10 MSLLIAEDFLMCIRRNNIFFILLFILVISISSITAGYKTINQKLNIFFSTFYQPSFDSLN NNENVFFRTDISFKLDKMINGYENLFQTSDYNDGLRIEFNGKNVYLLFSDIEGKLFGILI SADIQLNQIYKLRVTYINHKIYIILNGKNIINDFTNAYPKFNNIKFRKGFDDSREFKSGN ILSSHFILTNLSSYDFSFFIIMLLIIAIFADIRFILSNIDKNNIPNLSKDYIYNKNIYNK LLLLRTIAWAMVFIIHGYIIFYNSKVNENLHKIFLGDIDLTFLKYPSAWGGVWIFFVLSG FLMGKAFITKRYSYSSSGILQFYINRILQICPVYYFCIFTLAIFTYPEIFQPENIKSLIR VATFTNDSLLNINVDGALWSLSTEIQFYILAPFLVLFIVFLSDKIGLNKVLFLVIIFGII ERFTLFKISYNGLVDFEFWDRCIYKPLYCNIDLFLFGILANLYIDSISKKYKFKCIGFFI GIILTLLLFFNFFLGYYTFNTHIKFYAEKFIYLLPTFTALMTFLLIVLIEYKDILFNIKN NKSVLHYFGIMTFVIYVWHEPILFKVHQIIDQYHLGIGLNLFIGLCYCLFFGFLSYIFIE KPMSSYKRKGV >gi|257442393|gb|ACYG01000024.1| GENE 29 31596 - 31964 322 122 aa, chain + ## HITS:1 COG:no KEGG:Nitsa_2038 NR:ns ## KEGG: Nitsa_2038 # Name: not_defined # Def: GtrA family protein # Organism: N.salsuginis # Pathway: not_defined # 5 120 9 123 127 92 61.0 7e-18 MPIKRQLISFLLVGILNTAFGYGLFALFIYIGLYYPLAVLFSTILGVLFNFKTIGKLVFG SSDNGLILRFALVYVITYLLNIFFLWLFNKLGFENMYINGFVLLIPLAAVSFLLNKFFVF RR >gi|257442393|gb|ACYG01000024.1| GENE 30 31966 - 32898 945 310 aa, chain + ## HITS:1 COG:CC2889 KEGG:ns NR:ns ## COG: CC2889 COG0463 # Protein_GI_number: 16127121 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Caulobacter vibrioides # 2 310 22 329 330 183 31.0 3e-46 MKKISIVTACFNEEENVEEVYARVKKVMGEFPEYAYEHIFIDNASTDRTVEILKRLAKDD KNLKIIVNSRNFGHIKSPTYALLGADGDAVISIVADLQDPPEMIAQFIEKWQEGNDLVLA IKRDSEERGVMFKIRECYYELLSKLSEIEIFKNFTGFGLFDKKVIAALRQMHDPYPFFRG MLAEAGYKVAKIPYDQPVRIKGVTKNNFYTLYDMGILGIICNSKVPLRLATFIGMITGVL SIIVGLVYFILKLIYWDEMNVGIAPLIILFSFVSSGILFFIGIIGEYIGAIYTQVLNRPL VFEKERINFD >gi|257442393|gb|ACYG01000024.1| GENE 31 32891 - 33853 452 320 aa, chain + ## HITS:1 COG:STM2087 KEGG:ns NR:ns ## COG: STM2087 COG0463 # Protein_GI_number: 16765417 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Salmonella typhimurium LT2 # 5 118 1 114 333 80 40.0 3e-15 MTEDIFLSIAVPTYNRAKFLDKSLNSLCKSVYKSERRDIEILILDNASSDKTSDIAKKYI DFGFVKYIKNSENTGPDNNFKKAISLSRGKYIWIFGDDDLVFDDTIKYLMQILDSSSEFG IIHLKAQNFIDEIKPVEFKEFSNFKIYDDDRSEFIKEAHTNLTFITSNIVNKSLFDRIDL HAIANNNLPQLYWNIACAILSDKQVVVFDKIYAARQFNSGRYNFSEVFGTNLNDTLSAIE KNFDADFVLEIFRKRLLIYYYPANIIRIRNGLSAVRNENCFCNLYKIYKKFPSFWIFTVS AMWIPKKLGLLIVKFMQKTI >gi|257442393|gb|ACYG01000024.1| GENE 32 33883 - 35241 162 452 aa, chain + ## HITS:1 COG:no KEGG:BC5266 NR:ns ## KEGG: BC5266 # Name: not_defined # Def: heteropolysaccharide repeat-containing protein # Organism: B.cereus # Pathway: not_defined # 3 452 17 469 473 184 32.0 1e-44 MALAQIFFAFASVVSILVLPKLLSLEGFGYYQLFIFFANYVEFLHFGLSDGIYLRYGGRR YEFISKRTLKSQICTMEILYILECLIIFFTVCAFSFDKRLFLYIAISGAITVPRSFLYNL LQSVNEIKKSILVLFIERIFVLSSIAAVYFVDFDKAKFLIFSFIFARFISLVYICFLCRD LFKVKMASFTDSLFYIYKNMRIGIKLTISTLCNIFLVFIARSMIAWKFSIVLFGKISLIL SLLNFALFFINAFSAILFPILRTKKACEQNEIFKILDDGLSIIFVFLFLFAYPVEILLGA WLPKYADVLNYMPIIFTILLCEGKTLLLTNSYFKALRKEGQMLRINLISLIIFSVFIGFI VYFCNDIFIIMFCLFLSLFAKYIALSYGLKKFIKSVNFCNIGVEFFCGVCFIAISHILPG VYAFCLIIVSFIVLIVLKMKNFIQLLKFIKTI >gi|257442393|gb|ACYG01000024.1| GENE 33 35380 - 35571 269 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154149059|ref|YP_001406081.1| ribosomal protein L35 [Campylobacter hominis ATCC BAA-381] # 1 63 1 63 63 108 84 2e-22 MPKMKSVRGAVKRFKAGKNKIKRGSAFRSHILTKMSQKRKRNLREAQYVDSTNVSAVKKM LCK >gi|257442393|gb|ACYG01000024.1| GENE 34 35672 - 36028 523 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|222823081|ref|YP_002574654.1| 50S ribosomal protein L20 [Campylobacter lari RM2100] # 1 117 1 117 117 206 88 9e-52 MARVKTGIVRRRRHNKVLKLARGFYSARRKHFRKAKEQLERSLVYAFRDRRAKKRDFRRL WIVRINAACRLNDISYSKFINGLRKAGIELDRKILANMAMNDAEAFATVAKKAKAALK >gi|257442393|gb|ACYG01000024.1| GENE 35 36157 - 38118 2362 653 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0006 NR:ns ## KEGG: Lebu_0006 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 105 345 35 263 263 155 38.0 4e-36 MLKSLKKIVSLALVGAAGFGYASEQNSWSYANAQKSPSNNTSHSDVMSAADSLGAKLSRR DAASDSSASDEYESSFRIKLEYARGFAKKGSYSGRLNNQRVMMPAFRWTGNSGVNAEFWN GITNIGGALVPYVAFGSYEAATPGNQTTQYLVRREEDAVQMKRNIAAGISNLGYTYTTNS TRNLNLVYADIDNFVNFYGRENIAGYFIDEVNTENNPVTIAYMKSIYNYIKTKYPGMLVL ANNGWGVRDAIAPYADVWMLQEVSADEYINHYRPRTSEFEKDPANSSKILHVIYNARPDQ YDEIIRLSRERNAANLFITSDTNAYPSGYDDLPTYFEALMLAINNFTPKNGSLFSQVARG GNRIGIEMPRSKVDLDLTKLARNSAYKNLTDTDGQEFNVNVSAIGNYGGDYKDRSGGVKY DHKSDGILLGASKKVDDLTLGVIFGYQKSDAWYEGKFDGVKENIKSYELGLAGKYDFNEN VDLAVNLTYSTNDHKFETNNGFGAIHGAKYKSQIWDFSTRAGYKFLFENGYIKPYLGLGA IRVNEDAISRLKFSSASKTAPNGTAGIYAIKAFGDLQIFANAEYEHRFSGDSYHASRKYS DRYDVEGLDYSSGVFNGAIGLKYKILQSVGLSASYELSESKNSLARAAFDVEF >gi|257442393|gb|ACYG01000024.1| GENE 36 38613 - 39326 1011 237 aa, chain - ## HITS:1 COG:Cj1380 KEGG:ns NR:ns ## COG: Cj1380 COG1651 # Protein_GI_number: 15792703 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Campylobacter jejuni # 5 232 8 236 236 117 35.0 3e-26 MKKAILTSVALAASLNAALSDSEILSIYGGAPQGIEIKVAERIPLSEPKGVEAVVLKISQ GNMSQEEIIFTQGDLIFTDIIDPKKRVVYKEQIKQDRIAGQLSKVFKAESKDNIIKLGND PKKPTILMLTDALCPFCRKEMARIEETLKNNNVDIVMTSVHGDDGHAKSALIYKEIKNAK TDEQKIAVFRKYYAEDNKAGAKDVSAAELNAAKALAAKYFGAGVNSVPYIIELDKLK >gi|257442393|gb|ACYG01000024.1| GENE 37 39378 - 41198 1985 606 aa, chain - ## HITS:1 COG:Cj1379 KEGG:ns NR:ns ## COG: Cj1379 COG3276 # Protein_GI_number: 15792702 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Campylobacter jejuni # 1 604 1 598 601 546 47.0 1e-155 MNSVIIGTAGHIDHGKTALIKALNGFEGDRMPSEKERGITIDLSFSHLRSGDTNVAFIDV PGHENLVKTMISGAYAFDAAMLVVAADDGLMPQSKEHIQILSLLGVKSVILCISKCDLAD DARRSEVATQCREYIGKFKNLQILNTFFISIKDPASIAELKNYLFNIKPAQRQGGGVVHY YIDRVFSLKGLGTIVTGSLINGAISKGEKLYNCDLGKAFNVKSVQIHDEDTPLAQAPNRV ALSLDAKTSELQKGQILTKKGFFRGFNEADCTFSGEISHNQDVLFCVGSKQSAAKALILK ELPSGEKLVSFKFDKTMFLKFDEPFVCLANSRVIGGGRVLNAVVEPLKKQSKAVLLTALL KRNFTEAFKILSLFHKHGFGLFSAYQRFGMEYDEAVKIARGIEGTYFDEANLCVYDLSAI EDVKSLIKFIVSKNDYAIFSPASIALKLSWASEDLAARALSELERGGIVSKKGGVYVKSG VDFDALKQSLESKIFDLIKKGGIAPLAPYNIYDELEIDRESGDDALKKLTYAKKVVRLAH NLFVEAENLALAIKRLYAIIEKEGFVNVTNAKEELGLSRKFVICYLEYLDKMGNIVTIDN KRYLKK >gi|257442393|gb|ACYG01000024.1| GENE 38 41191 - 42801 1553 536 aa, chain - ## HITS:1 COG:aq_1031 KEGG:ns NR:ns ## COG: aq_1031 COG1921 # Protein_GI_number: 15606324 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Aquifex aeolicus # 6 239 5 239 452 200 46.0 7e-51 MQRIKLPKIDKIANAQEFQNCLRPQIIKIAQELIEQERQKALQGGELASESEIIARIKSR YEKFQNLSLKPLINATGVVLHTNLGRSVISAEILARAQKIITSYSNLEYDLSEGARGNRY DYIALLCSELFGAQDALVVNNNAAAVFLVLNTFASGREVVVSRGELVEIGGSFRVSEVMA NSGAKLVEIGTTNKTKLDDYEEAINENTAILMKVHRSNFKISGFSSSVSAAEVAALARKA TRKKEEFLALRAANFKNLENLCGGSSDATGEILNSAPNSLNLADSSANALNLNSGEPSKR SECFHEEGESEIPAKASKIAPTKFSMKKAESFNEIIDYYDLGSGYASELGFGLGKSEPSI FELLKSGVRLLSFSGDKLFGSVQCGIILGDRQLIARLRKNQLLRMLRVDKITLSLLAETI KAYINKEFHLITTIDQIHLSLDELRERAELVQSRISVKSQIVPTTTFVGGGTMPGASYPS VALAILDGADPQSTQAKFRTAGIIGRIEDDKFLLDFRSILKSDLQDLIKKIGEIYE >gi|257442393|gb|ACYG01000024.1| GENE 39 42968 - 43438 557 156 aa, chain + ## HITS:1 COG:Cj1377c KEGG:ns NR:ns ## COG: Cj1377c COG1145 # Protein_GI_number: 15792700 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Campylobacter jejuni # 14 155 13 149 553 103 42.0 2e-22 MKEHGFYAAGLKDVVLSDDIEICGDEEGAKNEEFIVANSPKLKAQIYAPQINFYIANTKD EPLLIAQNVDILYEAAAAAFDGALDSDYQKPVGKNVILACDEPREELVRLLKQHGFKVIA LSRAEIKFVYGEIGDLAVTILSERDEVETEADFFLD >gi|257442393|gb|ACYG01000024.1| GENE 40 43401 - 44651 1052 416 aa, chain + ## HITS:1 COG:Cj1377c KEGG:ns NR:ns ## COG: Cj1377c COG1145 # Protein_GI_number: 15792700 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Campylobacter jejuni # 21 408 164 552 553 385 48.0 1e-106 MRLRPRQIFFLISGAAPYQLRQSGCYEISGLKDDEILEILNSKSPVYHYKNSTIFDPAIC QYHGRRNELRAPCVEVCPTVAILKNDEKRELVFSYIDCIGCGACVSVCPSGALKFAKLPQ SVFGEIAKLYAGKIPLLIAESEIESAPAVQLPCGVLPFGIFGSKQIDEVNLLSAMQESGS SVIVYGADVGEGTREAAELINGISRAIYGKDAVFLARNLAELQEALKWAQSSQPWAFSLN DQGLSKKEIFSKRVSAMVGDGSFGVVKSGELLKFGKVSINEASCTLCLSCVGACNTGALY ADNSDNSIKLNASLCTTCNYCVLSCAEKDTIELQPCGVELESGFFNYKMLAKDELFKCIE CGKEFATSKAVMKIAEMMGAHFANEPEKMKTLFCCGDCKAKIMIKKQIEDARKGAM >gi|257442393|gb|ACYG01000024.1| GENE 41 44651 - 45520 674 289 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0537 NR:ns ## KEGG: CCV52592_0537 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 2 278 4 222 238 189 42.0 1e-46 MDANLLQARSYYYEFFAIPFFFYETDAKFKRWKEQLEFLRSSPIVPSDEAEFQNLAKFDF AAFKSEQNSVLFDFSYANVPMSASFYDEGRDDGRMRVAVIDVLKKSKFRRNMELCKECED YVGFIFYLHSTLLRDAAAKHSAVLNGQNSVINEQNFTNSASLTAQDGKNSAGLQNSKNFT DSQDGKNAANSQYAKNFVGAQDGEALALELFTNVTNSFVDEFSELLCGHVRADFFKSLGA LMRSFFALERSLLAIAAPQKKDRSVVKEAIKKGGYQNKFTNPEDIFDLD >gi|257442393|gb|ACYG01000024.1| GENE 42 45773 - 45970 310 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460007|ref|ZP_05625111.1| ## NR: gi|257460007|ref|ZP_05625111.1| Tat pathway signal sequence [Campylobacter gracilis RM3268] Tat pathway signal sequence [Campylobacter gracilis RM3268] # 1 65 1 65 65 81 100.0 2e-14 MENKRRDFLKKSLKIGAVGAVGVAASQALAKSEQDYGDTVRGKSPKKEVLYWESEAWKKY YKVAY >gi|257442393|gb|ACYG01000024.1| GENE 43 45981 - 46520 412 179 aa, chain + ## HITS:1 COG:Cj1511c KEGG:ns NR:ns ## COG: Cj1511c COG0243 # Protein_GI_number: 15792825 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 8 179 12 180 934 207 56.0 8e-54 MSENAIGRRSFLKLAALGASSVAAFGENNTLRAATEQEIKNPFPGSVMKRTICSICSVGC GIEAQVDESTNTWIRQDMAVDHPISQGSHCCKGIDQIDLTKSKMRLKYPLKKVGGKWERI SWEQAVNEIGDKMLQVRKEDGPDSVVFLGSAKFCNEQAYYFRKFAAFWGTNSNDHVARI >gi|257442393|gb|ACYG01000024.1| GENE 44 46569 - 48902 2089 777 aa, chain + ## HITS:1 COG:Cj1511c KEGG:ns NR:ns ## COG: Cj1511c COG0243 # Protein_GI_number: 15792825 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 1 776 198 931 934 791 50.0 0 MTNHVGDMAKNSKMILFIGANSAVANPVGAMKHALQARDRNGAKIVVVDPNFTRTAAKAD MYIRIRPGTDIAFVYGMLHLIFKNGWEDKELIKTRTYAVDEIKAEAEKWDPKEVANVTGC KEEELIEFTRMFATTKPATLCWALGITQHSIGSSNTRILALLQLILGNMGKPGGGCNILR GHDNVQGATDMCNLSDSLPAYYGLADNAWKHFCKGWGVDYEQFIKRFAVSTKQPHEKQGE KVPGTNFTEYFHYDPSIEQDVINWRNEKGFSLSKWWQGVLKNEPVLSSGNVRVLWVQGTG ITSMAHVRETQEALGKIDMLVVAEPFLNEVAILNDRPDGIYVLPVATQFESEGHLSATNR SGQWRTQIVKPLFESKEDQEVMFLFAKKFGFYDEYVRGMKMGIVDGELKQVKDDFVWPDD ATDEIARNTQSIGNNGRTAARFRRQQKNWHLFDPDTLRGIGGEVEGEYYGLPWPCWDTQH PGTPILYDVTKPYADGGMGFRNRFGLEHDGVSQLADESITLPGSKISGGHAEITKANIEQ VLGITLSEDEKTKMGPTWSTDYSGIIAKKCREFGICPCGNARARAKVWQFADQIPKHREP IHSPRWDLVEKYPTFADQKRNFRVFTRFISEQKKQDWSKDFPTIVSSLRLVNLSGAGMIE RTSKYLSAITPEMFAHVNPKLAADKGIKDGEMMWIHSPQGTKIKVKCIYSHAVTPDRIVM PYNFAGIFQGEDLSERYPEGTKPYIRGESSNTITNYGFDINTQISEFNAGLCRLERA >gi|257442393|gb|ACYG01000024.1| GENE 45 48912 - 49469 583 185 aa, chain + ## HITS:1 COG:Cj1510c KEGG:ns NR:ns ## COG: Cj1510c COG0437 # Protein_GI_number: 15792824 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Campylobacter jejuni # 4 181 13 190 213 258 69.0 4e-69 MPARLKFYVDVERCIACYGCQVACSSAHEVPVQINRRKVITLNEGIEGQEVSSSIACQHC TDAPCAQVCPVQCFYIRTDGVVLHDKDKCIGCGYCLYACPFGAPQFPRDGAFGIKGAMDK CTMCAGGPEPTFSHEELHKYGQNRIAEGKVPMCAAICCTNALIVGDASRVSEVYRKRVLT RGVSL >gi|257442393|gb|ACYG01000024.1| GENE 46 49711 - 50328 714 205 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1496 NR:ns ## KEGG: CHAB381_1496 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 202 1 199 201 144 44.0 3e-33 MKNKISLFLVISAFLIFTGCSKNVPVNSGIVRTSEPLHIMEFPQDKLISVNFTNTSTTDS NLTQVVIQHLRADGFKVVNKGAANVQIGGNLNYFRKADFSRRSWDNPRFSFGMGFGRYYR YTGVGVGWGMPFGYDPWDDDDYYRDYFYDSQISLYISVKNKGAWKDYVTNLNYQSIKNPG SKDSVMDALNFKIYEYIRQLIKQGR >gi|257442393|gb|ACYG01000024.1| GENE 47 50325 - 51236 839 303 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_2144 NR:ns ## KEGG: CCC13826_2144 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 146 1 147 155 72 29.0 3e-11 MIVKENKKPVAMTLAGSTILALASGYCYHAGFGGAALFASVVAAFCAFFCALRLGAKNYL QIGEDAFTIVRGANSESFEYKDIANLGTKTFVAGRNKTELLNFVFKKAPQAQDRFNFLRF YSDTEATLPGSFEISIYELSKILREKAGLSQSPEEEQTAPKTRKGAKGSKKSASSGKNFK AKNLRDENSDTQNSYGAQNLGAENSYAVQNSIAQNSNGAADSNGAQNLKGASNLNEQSSA APNGTASLNSACAGENFIGAENSASKISADDNKPDAAPESAAAASYDAVDTAMQNSACES KNK >gi|257442393|gb|ACYG01000024.1| GENE 48 51292 - 51876 710 194 aa, chain + ## HITS:1 COG:PM1618 KEGG:ns NR:ns ## COG: PM1618 COG1279 # Protein_GI_number: 15603483 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Pasteurella multocida # 4 184 30 212 226 129 43.0 5e-30 MLSLIVAIGAQNIFVISQGLAKNHVAAVCMVCALSDAVFTAVGIFLIGGALKQGSLLTQI LGIGGIIFLLCYALSSFFSAYKGSHFAKIQNSANSPLAPVVAKALAVTLLNPHAYLDTVV VVGSLGATIADAQKPWFYVGVMFVSFAWFFGLGYGSRALSKLFASSRAWRIIDALVGVLM LYMAYLIAKFVFKI >gi|257442393|gb|ACYG01000024.1| GENE 49 51919 - 52404 693 161 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460015|ref|ZP_05625119.1| ## NR: gi|257460015|ref|ZP_05625119.1| hypothetical protein CAMGR0001_0426 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0426 [Campylobacter gracilis RM3268] # 1 161 1 161 161 292 100.0 7e-78 MKIEIESGLELKEALWRVEKALRLVTDKDGKITSSATLYVGKHSLLNLLDTNQIENIQNA YARARTEFRAEMLGVLEGFLSQEDAEKDPEYALFNQLYQMAMTAGRKSDIFIHVQGISEN EVVLRVYQRFELESGETIYYAGGEFSYTLDENFGKIYRYEI >gi|257442393|gb|ACYG01000024.1| GENE 50 53454 - 54665 1763 403 aa, chain + ## HITS:1 COG:Cj0172c KEGG:ns NR:ns ## COG: Cj0172c COG1748 # Protein_GI_number: 15791559 # Func_class: E Amino acid transport and metabolism # Function: Saccharopine dehydrogenase and related proteins # Organism: Campylobacter jejuni # 1 397 1 397 401 704 82.0 0 MSNILIIGAGGVSQVATVKCAMNADVFSKITLASRTKSKCDAIAKLIKDRLGVAIDTAQI DADDTDAVVALIKKTGAELLLNVALPYQDLTLMDACSRAGIPYIDTANYEHPDTAKFEYK LQWAKDGEFKAANTMALLGSGFDPGVTNVFCAYAQQNLFDEIGEIDILDCNAGDHGYPFA TNFNPEINLREVSAKGRYWERGEWKETGPMEIMFKWDYPKVGVKDSYLLYHEELESLVKN IKGLKRIRFFMTFGQSYLTHMKCLENVGMLRIDEVEHNGVKIVPIQFLKTLLPDPASLGP RTKGKTNIGCVIRGLKDGKERQVYIYNVCDHEACYAETGAQAVSYTTGVPAMIGSMMVAK GIWSGKGVFNMENFDAKPFMDELNKQGLPWEIIEMKPGERYEV >gi|257442393|gb|ACYG01000024.1| GENE 51 54957 - 56123 1102 388 aa, chain + ## HITS:1 COG:RSc0216 KEGG:ns NR:ns ## COG: RSc0216 COG0477 # Protein_GI_number: 17544935 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 7 384 12 391 409 281 43.0 2e-75 MNSSKTSLSFLVVLSALMACTSLSTDVYLPAMPTMERQLHGDSELTITGFLIGFAIAQLV WGPISDRTGRKIPLFIGMALFAIGSVGCAMSDNMASVVFWRVFQAVGACVGPMLSRAMIS DLFGSSQAAQMLSTLVIIMAIAPIVGPLLGGAILEFGSWHGIFWLMALASAIMFAMIFSL PETLPPQKRSTKPIVSSFRNYLRLLQDVKFMRYTLSVTFFYVAAYAFITGSSFVYIDYFG IPSKYYGFLFGINIVGVMALSFVNKKLVKRYALNHLLIVSTLVAALAASVLFTFTFFKTG GVLGVIIPMFFVFSMNGIIASCSNAAALDSVPQEMKGSAAALIGSLQYGSGILSSAMLAA FSAGTPWTMSWIIALFVWLSALAAYFNK >gi|257442393|gb|ACYG01000024.1| GENE 52 56285 - 56659 566 124 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_0286 NR:ns ## KEGG: CFF8240_0286 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 54 123 16 85 86 62 42.0 5e-09 MKLIYAACVLAAFASAQTETVQVPDFAKSSMKTHEQAEEKLIANALKGDLSQIASDLKID KTLKGGESLVINGAHYRTIEGDSTQWKEGDAVRLLSGNKDGRCLSSIMLNLRTKTVCKFM CDAY >gi|257442393|gb|ACYG01000024.1| GENE 53 56909 - 59089 1816 726 aa, chain + ## HITS:1 COG:Cj1126c KEGG:ns NR:ns ## COG: Cj1126c COG1287 # Protein_GI_number: 15792451 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for N-linked glycosylation # Organism: Campylobacter jejuni # 16 724 14 711 713 447 39.0 1e-125 MQKFRITNGECSRMDIFLIMMLVYIFGVACRFFWIYWASGIEQFSFDGELIMTTNDAFAN AEGARDMIAGFHQPGDLSPYGASIPTLAFLLSKILPVSLNSITIYMSVFFAPLVVVPIIL IAREYKILGAGIIAALLACVLPGYYVRTLGGYFDSDMLNVAMPLLTLWALIRLIERGEQS SFILPAVFMVIYDWWYPSSYSLNMAIIVIFLIYTLIFNRHNEENYKAIILMVVAVINFGA YYEGETIIVNYILLLKIALIAFLYFLMIKIPSHKSKKALWILGVIVAVIFIIFGGLAPII LRLKAYILKDVSKEEIFYFYGVRNTVNEVENANFMKFVLESSGHLFIFICAVGGLALLLI KFRSFILTSPMIALGVLALFGGTRFTMYATPMIALGFAYFIYFTLNYFEIRTWLRSTLLA ILTCLVLIPSIDFIYKFRVAPTLTKDSIVPLAELKNKASREDYVLSWWDYGYLIRYYSDV KVVADPGGRQAGEYTFMSAFSFNKDEVSSANMARLNVEYTQKSQGKNFDPKLEDKFKLNL YQIQKDYAEADINKFLSSLNDKNFKLPQKTRDIYYYFVPQMIDILPNILKFSTVDIETGK ESWTPFIHVGYDIRMGKDGESIIINDECTLPSIDPEYLIYDGKRMPINSYYQVGEVNGKL VKLSKQIDKNSNLYVIFLPDYQRILILDKKVFESAFIQLFVLENYDKDLFEPVYLSNSAR IYKLLR >gi|257442393|gb|ACYG01000024.1| GENE 54 59345 - 59929 706 194 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1443 NR:ns ## KEGG: CCV52592_1443 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 194 3 195 195 122 37.0 6e-27 MRNLVAKVAFLGSLAAVSAMAEGLFIGGEGGYNFKNQAAGFDDGQPQIGVKAGYDFGTFR AYGGYFYGFKGEDSSSNANSKRKVKWSTHDFVAGADFTPELFGRFKLVLGAYAGLSVLDT EVKIDYSNGGWVRADDTLGGFILGGKIGTAYEFGSNSEIEMGFKASKAWYKNGDYIEDND GKKYGVYAGYNYKF >gi|257442393|gb|ACYG01000024.1| GENE 55 60285 - 62567 2690 760 aa, chain + ## HITS:1 COG:XF2272 KEGG:ns NR:ns ## COG: XF2272 COG0620 # Protein_GI_number: 15838863 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Xylella fastidiosa 9a5c # 8 759 9 758 758 664 46.0 0 MKSYVTGFPRIGEQRELKKALESYWAGKCDYDALERVAAELKDRHIKYQLDAWSGLISVN DFSYYDLMLDTSILFGVIPQRFAALSAHEQYFAMARGSKDAVAMEMTKWFNTNYHYIVPE ISAYTEFSLNPSKILSEYKAAKNNDFKDSCALKINLIGPITYLALSKSSDKSDPLAHLDA LVAKYEELLKLLSELDNEVVIQIDEPIFVTDRAAELAPKIEPVYHRLSKAASNVKIIFMT YFEHATEAVREIVKTDVWAIGLDFVYASEENIKKELQILKDAKTVLFTGVIDGRNIWKSD IDKKLAQLKAIEAYVPKERIYVGTSCSLLHVPFTLKYEDKLSTEIKSWLSFAVEKLSEIS ILTHLFFEIPMCEHGMKAYEENQKSAKTRASSPLIHDERVQSRAANLNKFERADRYEDRI KVQKKELGYGILPTTTIGSFPQTAELRQVRNAYKKGLIGREAYERDIKAYIDDCVKFQDE IGLDVLVHGEPERNDMVEYFGEQMSGYAFSANGWVQSYGSRCVKPPLLFGDVSRPRPMTV EWIKYAQSRTKKIMKGMLTGPVTMMNWSFVRDDKPRDQIVKQLALAIFDEISDLQDAGIK IVQVDEAAFKEGYPLRSENIPAYEKFAVSAFKLAVSAASAHTQIHTHMCYSEFNDIIKTI EAMDADVISIETARSGNELLRVFKSVGYKQEVGPGVYDIHSPRIPSVQELVSQIRALLEV LPKEQLWINPDCGLKTRKWEEVRPSLKNMVEAVRIIRTEA >gi|257442393|gb|ACYG01000024.1| GENE 56 64055 - 65614 1215 519 aa, chain + ## HITS:1 COG:Cj0611c KEGG:ns NR:ns ## COG: Cj0611c COG1696 # Protein_GI_number: 15791971 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Campylobacter jejuni # 125 519 70 458 458 256 41.0 8e-68 MTFFSPEFVLAFLAFLIVYWTLKNHIFAQKILILLASYGFMCSINPRFALVLAAYSAFVY FAGVCIARANRVVAKAIPPAKQSSHKKKLSRKAAAKQMSAAKQAGIAKQVQKAGLAKQIP LPTAKARAVMLAAVAGGLFFLAFFKYYGYVREFFNAALAALHLGAVDSVAFPLGISYYVF MSITYFVSVYRRECGEQGFLSLACFLAFFPSVVMGPIGRASAAKGVEPVLPQFDRFKHFG NADEIYVLIIFALVKLLLISGYLGAYYSDVISGVYGDEPESSVAQILAALLLYGVVLYTN FSGFIDMARALGLAMGFKLPQNFNMPYAAKNLGEFWDRWHISLSTFIRDYIYIPLGGSRN GFARTCVNLLIAFALSGIWHGAGLNFLIWGLLHGAALVFLKCLAKVGVKPLNPHLALFCT YIFVSFAWIFFANSLPDAAAILSAFARARAFGDISELAVLAVILAGIFVYPKISALKDTL IALFAELPFLPKALVLGMIFTLIFALMPSGIPNFIYAGF >gi|257442393|gb|ACYG01000024.1| GENE 57 65615 - 66925 1318 436 aa, chain + ## HITS:1 COG:Cj0610c KEGG:ns NR:ns ## COG: Cj0610c COG2845 # Protein_GI_number: 15791970 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 145 436 62 330 336 153 32.0 7e-37 MLRFVSTLLFALLFSAFFMQGSLLYYLEQRFHDDFGLEEWLRRSPFRVGGEIYEKIANGA DKLEQRIKGEDISKDEDASPHGGSENFKKSTQDRMAENQALQSTRARDHDVSQSVKPQDS KPQAHAAKNSALNNSTHHLKTRDSAQEPYAQNSAPQNSTSQNSVSQSLATTSSVPRSSSA PQNPVTASATLQSGENSDSQLPAPQALEQNLTTQGSVEVDAKISLSDDGKIRLNAGDEVL FMGDSLMQYVGMNAKKFFPKRSLRVIDLSKQSTGLASKKSFDWQKTLDTALRENGGVKLV VVLLGANDVWEYRAGGKTYGIKTPRWREFYASRVREIYDTAHSHGAGVLWLAMPCMQKPD FEEKTQLLNQIYADASMALGGYFMQTTPLVCEKGVYKTYLQSGSKLVRVRQDDGIHMSKE GCEAVAKEILSRIEVE >gi|257442393|gb|ACYG01000024.1| GENE 58 66918 - 67970 812 350 aa, chain + ## HITS:1 COG:Cj0609c KEGG:ns NR:ns ## COG: Cj0609c COG2755 # Protein_GI_number: 15791969 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Campylobacter jejuni # 37 347 66 387 392 174 30.0 2e-43 MSKFIVILFAALLGGCAANAGVRGINSANAKSSAGFGVKFFGDSHLGSDALIDAFRHGFF VQNSVGFVPAMMPKYHKSENIEFKQSGFNVISSRTEQDPDFPLCGVIATGKKGANVRLEL KQLSGDFYVEILHKSDQSGEIFRVRDASGLSAYISQEVPQKWEYSKLRLRFPIEIRSLRD GAELGGYKIYRKNARFADSCASNGAFSNLYEKWGADAFGRDFSGLRYNLVVIAYGTNDAM DPKFDEQKFYQSVRGLLRSVRSAAPGAKILLVAPPRSPKVPNASRAAEVLAHLARDEGAM FYDIAGLMDEDGGWRGWRERGLIRPDEIHLQKEGYEKIGAALATKLRGRL >gi|257442393|gb|ACYG01000024.1| GENE 59 68112 - 68324 115 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460035|ref|ZP_05625139.1| ## NR: gi|257460035|ref|ZP_05625139.1| hypothetical protein CAMGR0001_0446 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0446 [Campylobacter gracilis RM3268] # 1 70 1 70 70 118 100.0 2e-25 MYRNALCSSRNRANLIRIRSVNLGDEILKAWASSLSPHKFKATASDLKFRGADLSGEIRA SVALLTATKF >gi|257442393|gb|ACYG01000024.1| GENE 60 68418 - 69128 743 236 aa, chain + ## HITS:1 COG:no KEGG:Shel_06530 NR:ns ## KEGG: Shel_06530 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 2 235 5 228 244 143 37.0 5e-33 MIYLCGDTHGINEIGKITNKAFAGGLSADDFVIVLGDFGLFWSERIDEFMARKNIERYFP ATLLFIDGNHENFDMLDQLPRERKFRGTVSVGGENIFWLRRGEIYEIAGRRFLCFGGALS VDKAHRIPGLSWWAREIPSEEEFACAMQNARDFIAAGRRIDAVLSHTAPWFAMKFLKEYL WCSKSTPDKTSEYLERIFELVRPARWYFGHFHGDKKFHTHGCDFYLCYDEILKFED >gi|257442393|gb|ACYG01000024.1| GENE 61 69770 - 70336 949 188 aa, chain - ## HITS:1 COG:Cj0551 KEGG:ns NR:ns ## COG: Cj0551 COG0231 # Protein_GI_number: 15791912 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Campylobacter jejuni # 2 188 3 189 189 344 90.0 5e-95 MAYSMGDLKKGLKIEVDGIPFKIIEYQHVKPGKGPAFVRVKIKSFIDGKVLEKTFHAGDK CEAPNLEEKEMQYLYDDGEACQFMDTDSYEQIAISDEDVGEAKKWMLDGMMVNIMFYNGK AIGVDVPQVVELKIVETAPNFRGDTQGSNKKPATLETGAVVQIPFHVLEGEVIRVDTVRG EYIERANK >gi|257442393|gb|ACYG01000024.1| GENE 62 70425 - 71165 1063 246 aa, chain + ## HITS:1 COG:Cj1380 KEGG:ns NR:ns ## COG: Cj1380 COG1651 # Protein_GI_number: 15792703 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Campylobacter jejuni # 1 243 1 236 236 80 31.0 3e-15 MKKIIYVLAACAAFTLGANANEVEFVKNLKQSLNDKNAQLISIDKLNSLNGLNLLIVRSG DKKEAFLASDDAKSLVAVTEEPKLADAADAALFKMRTQILTDARDAAALELLKSIDPARF AYIESFDKNNPYVTYIVGDPECPYCAEEMKRITKHLRNSNVKLIFAPVHGKSAFIKSALI LKQLKALLPSDQKGAIDVIEKYYDKNVQVSDADVSKAELDAVYADTKTLFSKGVIKSVPY VIKVKK >gi|257442393|gb|ACYG01000024.1| GENE 63 71649 - 72485 645 278 aa, chain - ## HITS:1 COG:Cj0792 KEGG:ns NR:ns ## COG: Cj0792 COG1672 # Protein_GI_number: 15792130 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Campylobacter jejuni # 16 278 35 290 292 127 34.0 2e-29 MGDAGIDAILQFHFVFDEIGCISGYADVFEAIENEILLCFERLGERFKFGGEYEEQIKKA LMKFARSDRKKIGISKILPRFTAQKITADLINAKFLITEKSSEQRTQKARKNDRLPRALR RYHITDKVHFSSNFARFWFRFIEPNLPALRRGEIGRVLSLIKADFNAYAGLGFEILSKEL LAKYLNLEISQISSFWNKEVEIDIYAKFENFCVAGECKYKERKISKNVLNELILKCEKAD LAPDLLALFSKSGFSGELQNLKSDKILLFSLEDFKILL >gi|257442393|gb|ACYG01000024.1| GENE 64 72584 - 73900 1177 438 aa, chain + ## HITS:1 COG:Cj0791c KEGG:ns NR:ns ## COG: Cj0791c COG0520 # Protein_GI_number: 15792129 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Campylobacter jejuni # 1 417 3 417 424 345 42.0 1e-94 MDFETIKENIILKEGVKYFDFAASGLAYRPIEAEIERVLATYANVHSAGGESAEITSDYY ENARAKIKELLGCEERYYLISCGFGATAAIKKLWEILGIYLPPATRDRLGLRRESIKELP LFIISPFEHHSVEISLRQGLCEVVRVPLDGSGLMDFARLGEILSANKGREIYGVLTAASN ATGLKIDYKRAYLMLKAHGGRLFVDASALIAHENVDLGFCDGMFFGAHKLLGGVGASGIL AVRKELLRGEEPTFAGGGTIKYADALTQRFIIDKERLEEAGTPGIIALVRAYLALKLRKS AGLEAIKSREEAICRRFISEISKIHEIKIYGNLTAPRVPIFAFNMKGLGADALAGVLGQK FEIQTRAGCDCAAPYGFDLLGLQPDIEMSRKPAWVRASFLFIHDESDVDFLAEALRQIAQ IRDKITFVAGKYRCGSVN >gi|257442393|gb|ACYG01000024.1| GENE 65 74521 - 76344 1770 607 aa, chain - ## HITS:1 COG:HP1417m KEGG:ns NR:ns ## COG: HP1417m COG2194 # Protein_GI_number: 15646209 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Helicobacter pylori 26695 # 82 597 67 554 556 186 27.0 2e-46 MSLVKNIGAFLKDRFSLLSVFDGAVLNAYVLVLVLNLALGLLLIARGGELLSAQALFFAV SAICGVTILFFALYALSFYSARLYKILAFALLAINVAFAIAQIFLIFSLELTYSHGTLDA LVQTTPKEAFEFAHAFLNFKLIAAFLALLIFVIAALMLRVSQRARMKLCRAIKLIFLLSL LVFIAHAAFKSYVAKSSKMRASIIIALNKIPIYNFAFVTKDYFGADFKSVRELQAGYQSI YASHSHKTAPNRISNVVFIIGESLQRNFMSLYGYYLPTTPNLQALEKSGNLIAFSDVVSP GAKTNDVLKYVLNFGNYESEKQRPWSANLDIVNLARLANYETFWISNQERYGQWAVASGA SAQMTDHSDFTNQIPVYKYAYSLDEVMLPSIKNFKSGAKRSPLARKDESSAAEVGSTQKK DKFFILHLMGSHPSYEFRYPKSFAKFSAADISREPLDEGQKKELAHYLNTVAYNDFIVSE IYKIFADDNTLIVYFSDHAQSLYQYRGKLIHGGINRFTLEIPLIFMASDKFKEQNADLWA RIAAAKNRPFLNDDLIHAIAEILEMTDLPEYDPTRSVINSDFNASRPRIIEGVDYDKVYR LQKEFGE >gi|257442393|gb|ACYG01000024.1| GENE 66 76367 - 77143 1055 258 aa, chain - ## HITS:1 COG:Cj0205 KEGG:ns NR:ns ## COG: Cj0205 COG1968 # Protein_GI_number: 15791592 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Campylobacter jejuni # 6 258 6 255 267 209 50.0 5e-54 MNIFDAVILGIVEGLTEFLPVSSTGHMILAAKLMGLQQTDTLKCFEVVIQLGSILAVVAM FYKRLLVDFKLWCKLVVGFIPTAAIGFLLYKSIKSLFAPQTVAYALIGWGIIFIAVELFR KARPRENELEHLDQISYVQAFIIGLSQCFAMVPGTSRSGATIIAGLLCGLSRNLAARFSF LLAIPTMFAATFYDTYKNLDTFAQNSDNITTFLIGGAVAFVVALAAIKLFLSFVSKFDFI PFGIYRILIGVVFFIFVF >gi|257442393|gb|ACYG01000024.1| GENE 67 77130 - 77744 553 204 aa, chain - ## HITS:1 COG:PA3976 KEGG:ns NR:ns ## COG: PA3976 COG0352 # Protein_GI_number: 15599171 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Pseudomonas aeruginosa # 4 180 6 183 209 129 41.0 3e-30 MSEIYALSDDTLTPPQTIFSQIDEILRCGVKLVQYRSKLAVRDEALIRSLIGLCEDYGAK LIINDDAALAKKLGAHGVHIGKDDGETAQVREFLGANKIVGVSCYADLARAQKAEAQGAS YVAFGSLRRGKTKPDAPLCPDALVQEARKSLNLPIAVIGGISLENLNEILALKPDYIAMV EAIYRPASITQNLANLKEKMDEYI >gi|257442393|gb|ACYG01000024.1| GENE 68 77737 - 78273 544 178 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460050|ref|ZP_05625154.1| ## NR: gi|257460050|ref|ZP_05625154.1| hypothetical protein CAMGR0001_0461 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0461 [Campylobacter gracilis RM3268] # 1 178 1 178 178 317 100.0 2e-85 MKKIFLALAILLCTQSFAEQKDRYGIAAFAGLGNDGRSFVFTFRKAQKDRFFPCDLKNLN IIAADASRCITDAKELKKFDKEYKKALESVIKPGKRYYVNLIDRGNDAYVCDASDPKSNL RLDLVAAGFAVPTTDDSELLLKAAEEAKEAKRGMYSAKFWDVTNCILNGVPMPKKIDE >gi|257442393|gb|ACYG01000024.1| GENE 69 78333 - 79073 986 246 aa, chain - ## HITS:1 COG:Cj0734c KEGG:ns NR:ns ## COG: Cj0734c COG0834 # Protein_GI_number: 15792083 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 28 246 34 251 251 206 49.0 3e-53 MKKFMRFLVAGALLCGSLIAKDIAKDTLIVGTNAEYPPFEFVDENSKVTGFDMDLVAELA KRAGVKYEILNMSFDGLIPAIKSGKIDMIASGMSATPARKKAIDFTAPYYKVENLYVKRK DDSSLNSKADLQGKRLAAQLGTIQELAIRDIKGAEVSATENVFVAVMSLKNKKIDALCVD SSVGYEYLKKNDDLTAFFKESDGSEGFSIAFDKGKYPELLAKFNAALEEMKKDGSYEKLL EKYNLK >gi|257442393|gb|ACYG01000024.1| GENE 70 79085 - 79813 605 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 237 48 3e-61 MIEISNLTKSYGNLSVLKGISKTINKGDIVAIIGPSGGGKSTFLRCLNLLEIPSGGTIKI DGEDITDKHTDINKIRRKVSMVFQHFNLFANKNVLENLTLAPIKAGIYTKEQALAKAEEL LQKVGLSDKAYTYPHKLSGGQKQRIAIARSLAVNPDVILFDEPTSALDPEMIGEVLGIMK EVAKEGITMLVVTHEMGFARNVANRIFFIEGGKIAVDDTPKNVFENPQNPRLKEFLNKIL NH >gi|257442393|gb|ACYG01000024.1| GENE 71 79806 - 80510 677 234 aa, chain - ## HITS:1 COG:Cj0901 KEGG:ns NR:ns ## COG: Cj0901 COG0765 # Protein_GI_number: 15792231 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Campylobacter jejuni # 1 234 1 247 247 238 57.0 6e-63 MNEKILKVVFVLTVIAVGLYFTYPELSEAQKISYAKSYGITLILTSGGIVIGIALGFMLA FLKFLNNKFLSFIIDEYVDIIRGTPIVIQLMVFVFIIFATWSNNIAAAIFALGLNSSAYV AEIVRSGINSVDRGQMEAARAMGLGYGTAMKEIIFPQAIKNILPALANEFISLFKETSVV GLVAITDLTFFSKSMQAALYTVQPILFAAVLYYASVKFFSFLVKMLESRLNRND >gi|257442393|gb|ACYG01000024.1| GENE 72 80638 - 82146 1776 502 aa, chain + ## HITS:1 COG:BS_opuE KEGG:ns NR:ns ## COG: BS_opuE COG0591 # Protein_GI_number: 16077734 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Bacillus subtilis # 1 467 1 467 492 437 49.0 1e-122 MSFWTYFAIAIYFGALIFIGRYYYDKNASLSEYLLDNRRLGPFVTALSAGASDMSGWMLL GVPGAMFATGICNIWIALGLCVGAWCNYKFLAKRLRIYTEVASDSVTIPDFLENRFKDHT KTLRIISGLLIIIFFTLYVSSGIIAGGKTFESFFGLSFTYGAVATILIVVFYTFFGGFKA VAITDAFQGALMFAVLILIPLFSYRALQIPADSSFFAQVRLYGASHLDLFYNQSFLGVLG LLAWGLGYFGQPHIIVRFMAIRSSRELDSARRIGISWMVLGLVGAMLSGLIGFVYFSQKG LSIDDPEKIFLELGKIFFHPFILGVIISAVLAAIMSTISSQLLVSASAVTKDFIFAFYKK EVSERTQTLSSRIAVVIIAAVAAILAFGSNDTVLNVVGNAWAGFGASFGAVLLFSLYSKK MSALSALVGMLVGGITVICWILSGLSAIVYELLPGFCFSALAILLVNRYNSVLDKMADEP NAAQISQEFEKMKEQSLRGKDG >gi|257442393|gb|ACYG01000024.1| GENE 73 82139 - 83482 1590 447 aa, chain + ## HITS:1 COG:HP1143 KEGG:ns NR:ns ## COG: HP1143 COG4487 # Protein_GI_number: 15645757 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Helicobacter pylori 26695 # 6 421 11 423 433 276 42.0 5e-74 MANVKCPHCGSLIDIDEALQRDIKAKFEDEILQQKRKWQQQQNEATLKFEAEIAAKREEY AKHLAQLQAKENAFEQRVKAATDSALNSEREKILALAKSQIESENAAKFEILQKELQEKS QRISELNLIKAEMEAQKRKFSELEAENKAKSEIELTNRVNQERERLSKQISQENELKFRQ KDEQIQSLIGQINELKRRSEVGSQQLQGEVQELALQEYLRLNFPLDEIDEVKKGARGADC VQIVHTREFVGCGKILYESKRTKSFEPKWIDKLKDDMIGEGAQIGVIVTEQMPPHSPRLH QAPSDASIWICSFEEFKGLCAVLREHVVALAFAKRSGQNQDSKTAMLYDYLTSPEFANQI KTIVSAFVGMQESLNKERNAMERIWKQREKQIARARDGAIAMHASIRSIAGSGVAQLEDV DEILSLEAIATEGEADTLQNQDGDETP >gi|257442393|gb|ACYG01000024.1| GENE 74 84006 - 84209 100 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460057|ref|ZP_05625161.1| ## NR: gi|257460057|ref|ZP_05625161.1| hypothetical protein CAMGR0001_0468 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0468 [Campylobacter gracilis RM3268] # 1 67 1 67 67 129 100.0 7e-29 MLPKIRIFYLFINLCKSSKPPVTDVAQPTIAFAAYLMRPARYAARNESCARKISHAQNNC GMIEGRG >gi|257442393|gb|ACYG01000024.1| GENE 75 84190 - 84846 604 218 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0359 NR:ns ## KEGG: CHAB381_0359 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 109 201 436 521 541 69 43.0 9e-11 MRILGSIIWFFVGGWILAILTYLSGLILNRFSRTAPAGLGLMEYGKFLFLPFTNDMARKN KSSLTVAAKSLQNCEYDVTPQKVSVATIIATVCIVAIALPAVAIAGPGLTTRDDAEISRL ATNLMIVEADIKSYYISQSKFASDFSVMTNVPLEPNGANSAYLKSLKGDKCFLISVDGEK KTISIAKGPDAENNICRGAYELPGVPKMLSEPIQVKSY >gi|257442393|gb|ACYG01000024.1| GENE 76 85439 - 86749 1454 436 aa, chain + ## HITS:1 COG:PAB1799 KEGG:ns NR:ns ## COG: PAB1799 COG1301 # Protein_GI_number: 14521051 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Pyrococcus abyssi # 10 429 2 419 425 385 51.0 1e-107 MSENQTKKGGILAFYFNSSLLWRIIIALVLGSAIGMLLPKNMPVGDTTWVAILTPLGDLF VRLLKMIMVPIIICSLIVGTSSISPAHLGKVGVKAIIFYAITTLFAIVIGLACAFIFSPG SGLDLSDASKAVEKAANAPSMSKILLNIIPTNPFDSIAKGEILPIIAFCLFFGVGLAFCR DSSDARIKSSADTVYNFFDGMSEIMFKVVHWVMQYAPIGVFALMFVVFNKSGIEAFSSLL NVTITLYVGLAIQVFAVYCVICMLIGVSPIKFLKKVRPPMLTAFVTRSSNGTLPITMQTA EDMGIPKAIYGFVLPVGATVNMNGTTVYLGVCTLFIANACGIDLNSSHYLTIIITSMLAA IGTAGVPGAGALMLLLVLESIGVKVSGNVAIAYGMILGIDAILDMGRTSMNVTGDVVASI YVAKSENEMDMSKWED >gi|257442393|gb|ACYG01000024.1| GENE 77 86779 - 87459 708 226 aa, chain + ## HITS:1 COG:PH0670 KEGG:ns NR:ns ## COG: PH0670 COG1794 # Protein_GI_number: 14590552 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Pyrococcus horikoshii # 1 224 1 225 228 136 37.0 3e-32 MKRVGIIGGMGPLASADLYMKIIEETAAGGDQENIPLVIDSYPQIEDRTAFILGKGENPL PRLSESAVRLKNAGCRAFAMACNTAHFFADDVEAAAEIPLIHIAEVTVKAIRKNYPNAHK IAVLATIGTKKAKIYDDPLKEAGLISVDLGEENQAVLMDCIYKGVKAGKTAEYVGAFENL LGKIDADIYVVACTELPLFLPLIKSDKIFVDPTRELAKAIVEFSRS >gi|257442393|gb|ACYG01000024.1| GENE 78 87780 - 91925 5180 1381 aa, chain + ## HITS:1 COG:Cj0718 KEGG:ns NR:ns ## COG: Cj0718 COG0587 # Protein_GI_number: 15792067 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Campylobacter jejuni # 1 1110 1 1104 1200 1372 60.0 0 MSDYTHLHLHTEYSLLDGANKVSELAELLQSRGTKACAITDHGNMFGAIDFYQTMKKHGI KPIIGIETYLHNHDDIGDKSDRQRYHLILLAKNETGYKNLMYLSSRAFLDGFYYYPRINK KILKEHSEGLICSSACLAGEVEFHLNRSERNLKRGAGGYEAAKKAALEYKEIFGEDFYLE IMRHGIGEQLNVDKDLIRLSREIGVKIIATNDAHYSRKDRAKAHDVYQCISMGKTINDGD RLKHVVSEFYVKSDEEMRRLFADIPEVIENTAEIVQKCNLKFAFDEKDYAPTPPNFKFTI EYAARLGLSLPQPDERYSFANDDFLFDHLCREGLKERLKFIDPAKHEIYRERLEKELAII KNMHFSGYMVIVQDFINWAKDHDIPVGPGRGSAAGSICAYALRITDLDPIPYNLLFERFL NPSRISMPDIDVDFCQARRGEVIDYVIDQYGKFNVAQVATFGKLLARGVIRDVARVCDMP LSQADKMAKLIPDKLGITLTQAYDAEPKLKEFIDADPIAQQVWEFALGLEGLNRNAGMHA AGVVISNEPLWNKAPLFKQDKGEDARLVTQYTKNYLEDVDLIKFDFLGLKNLDVIDNAAK LVKRRYGRDIVWEEIDFNDRKTYETIQSGNTLGIFQIEGAGMQDLAMNLRPDRFEDIIAM ISLYRPGPMDLIPDFIRIKHGELKASYIFPELKEILEPTYGIIVYQEQVMQIVQKVGGFS LGDADLVRRAMGKKDEKKLAHMREQYLSGAKELGFDVAKADELFDLIMKFASYGFNKSHA AAYSMITFQTAYLKTYYPAEFMAALLTSEEGNTDKISKYIDEASRLGIGLLPPSINQSLR GFSVVDDENSKSGTSIIYGLGAIKGVGAAAIENILELQSEAKFQSIDDFASRVDNFRVNK KVIESLIYAGAMDCLGKSRLAMIQNMENILEVMKKITEIKKDAASSLFGEDEDMTSGMSV SFVDTDKEFPQGEILKFEQQTVGVYLSGHPLDDYKEEIEGIDYTLSSAFSEIEGDSAEVL SVGRIEDLSTRMTKTGKKMGILNVLDLHGSFELAVFDNALKAIENLSPQERERPYAFMIK ISKSAVGGAAYQLSFLSMMSLQNARDASFRPHAGVFLSENPLKAYAAQLGAIAHTKSNEF DELAGDEDASVKILCVGKIENVHTRTTKSGKQMANLTVLDLAGSFEMSAFGDICDAVTAL TDAELERPMAFWARLSKNTSPYGGKFQIYLDEILTLDAAQNIDGYVPSKMRGFGGREREG FSGSNFGSGRNFGGERGGGYGSGNFTERRGSVAAEDPALKARKEREAQRKNAQDFEFELS LGELSREKIYKIYHLAFCDTALKNTKRLILRIRNGSEVLVYPTEYIVSDNFTEKVREIIA A >gi|257442393|gb|ACYG01000024.1| GENE 79 93324 - 93935 807 203 aa, chain - ## HITS:1 COG:CAC0936 KEGG:ns NR:ns ## COG: CAC0936 COG0040 # Protein_GI_number: 15894223 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 2 202 7 211 215 159 46.0 4e-39 MITIALPKGRIADDTLKIFKTIFGLDFAFEDRKLIMQEGDFKFLYVRNQDIPTYVMGGAA DIGVVGLDVLEEHRPDVLTLLDLKIGKCRVCVGVHAGTRLNYGAPSLKIATKMPNITREY FASKAVAVNIIKLYGSIELAPLIGLADAIVDVVETGATMKQNGLQPAETIMQSSAHLIAS KNSFVLKRDEILNLRDKLAHTIA >gi|257442393|gb|ACYG01000024.1| GENE 80 93932 - 94552 593 206 aa, chain - ## HITS:1 COG:Cj0394c KEGG:ns NR:ns ## COG: Cj0394c COG1521 # Protein_GI_number: 15791761 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Campylobacter jejuni # 1 202 1 203 209 192 46.0 3e-49 MLLCDIGNSRVKFYKGGVTQSMPVAEFMRYEPKERIFFISVNDSVKKKLKNPLFVDLASH FELKTAYRGLGIDRIAACSAVATGIVVDAGSAITVDLMFRGSHLGGFIMPGISTLLKSFA SIAPVLDVTLSTNIDLDPLPQKTVSAVNYGILKPIVLTIENIAGNNKIYFTGGDGAYLMR YFRNSIYEKDLIFKSMVSLIAKKGLA >gi|257442393|gb|ACYG01000024.1| GENE 81 94539 - 94871 406 110 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1639 NR:ns ## KEGG: CHAB381_1639 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 110 1 110 110 101 48.0 1e-20 MLDKISKLCVREGLLLQKFQTLDIASFTRSRSYGAYFGVDLKSYNVLLFMRDAKSRFVMR DAEFLLSLANDISASLGKVVKKRVLFYNSQMCSKSAKFLKENGFSLYAFV >gi|257442393|gb|ACYG01000024.1| GENE 82 94861 - 95874 1031 337 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_1148 NR:ns ## KEGG: CFF8240_1148 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 4 335 5 333 335 273 43.0 7e-72 MKKTLIFTLLLSFLFLGCSTKRQYFEPSDENITGDMKFNGSLPSEIVAVSKDGATLKDGE VISKNGLVKNFKVLKSEKFLGEYDGNFVVTDINGTLKVVSGTGAVKFEKALGRQALSANI HGDDLALVMSDDSIMLIKLSSGAVVLDHKVGDAFAIDSRVASPLFINQLIAYPALDGLVS IAENVGGRSARDFVVSNQPFFNNIIALENKGDNLYAVTATRLMLVSPAGNKNHNVDIKDV IFSGDRIYLFLKDGRVELLDCGLNLIKSRKFTFAQFSGALLSGGYLYIIERNGYVIRTDE NLEGQAIYELNDEVEDKSFIAGTSFYYDDKILNFDAR >gi|257442393|gb|ACYG01000024.1| GENE 83 95874 - 96425 606 183 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1641 NR:ns ## KEGG: CHAB381_1641 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 179 14 196 202 176 55.0 5e-43 MALKDDIEGVKKEIGTEEQFLESVIKSEIFVKKYKKPLIFLAAVLIVAFIGYYANEFLSD RRIASANAIYDELLNNRDDTKLAELKQKDINLYALYILQNGSADERAALENTQGIDVMLK EIINLQNGKQGGVLLTDYDSLLKGYDLLKEGKIEQAHAELDKIPLNSPVRQIALALKHYG GNK >gi|257442393|gb|ACYG01000024.1| GENE 84 96542 - 96829 342 95 aa, chain + ## HITS:1 COG:Cj0398 KEGG:ns NR:ns ## COG: Cj0398 COG0721 # Protein_GI_number: 15791765 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Campylobacter jejuni # 1 95 1 94 94 84 54.0 5e-17 MIIDDALLSKLERLSALKIPDEKREEFKGQLNNIVDFVEILNELDLQSGEAAITTLKGGT PFRKDIPRKSDVAESVLKHAPQSEGGYFVVPKIID >gi|257442393|gb|ACYG01000024.1| GENE 85 96840 - 97922 968 360 aa, chain + ## HITS:1 COG:VC0462 KEGG:ns NR:ns ## COG: VC0462 COG2805 # Protein_GI_number: 15640489 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Vibrio cholerae # 9 328 1 318 345 345 55.0 1e-94 MEEVQRNLVDIETLLKTVVFNKASDLHLVSRSAPQIRIDGTLRPLAMDPLKGTDIEYICY ALITDAQKSALEENKELDFAIELPNIGRFRGNYYYTMNGDLAAAFRIIPIDIPSLDDLKA PTIFKEVVKHEKGMILVTGPTGSGKSTTLAAMLNEINEKERKHIITVEDPVEFVHTNKKA LFSHRNIGTDTHSYANALKFALREDPDIILVGEMRDRETISIAITAAETGHLVFGTLHTN SAMQTINRIIDSFDGGEQLQVRNMLSVSLTAVISQSLLPKLGGGRIAIHEILLNNNAVAN LIRENKVHQIYSQMQLNQQSTGMITQTQAMVKAIRANQISKDTAFRYSTNLQELIGVVGA >gi|257442393|gb|ACYG01000024.1| GENE 86 97922 - 98599 464 225 aa, chain + ## HITS:1 COG:Cj0399 KEGG:ns NR:ns ## COG: Cj0399 COG1286 # Protein_GI_number: 15791766 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Campylobacter jejuni # 6 197 5 185 187 131 40.0 1e-30 MEGINWFDVGCLVLVVLFGLRGITNGIVKEIFGILGLIGGLFAAMRYKTMAGEWIAAKIP ALQNANGVLSGDTTQVLIGFIAVLFGVWISCLIIGEIISKFFKWSGLGFVDKIGGFVFSV SKIFLIFAVIVTLASGPMSMNEQTKKYFESSKTAPIFLKIGNWILNLKDDPKIKQSLDSI GSKMDDKLLKDQNSTARMNSDQNQSTEPSDFNASSEVNSTERTKL >gi|257442393|gb|ACYG01000024.1| GENE 87 98596 - 99063 453 155 aa, chain + ## HITS:1 COG:Cj0400 KEGG:ns NR:ns ## COG: Cj0400 COG0735 # Protein_GI_number: 15791767 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Campylobacter jejuni # 5 154 3 152 157 210 66.0 7e-55 MNAKIENLEFDALIVEFKKALAASGLKYTKQREVLLRTLYNNNKHFTPEALHNEIKAKFP ELNVGIATVYRTLNLLEDSGMATSISFGAQGKKFELANKPHHDHLICKSCNKIIEFQDAT IERKQLAVAKEHGFTLTGHMMQLYGICPECAAKRK >gi|257442393|gb|ACYG01000024.1| GENE 88 99161 - 100558 1523 465 aa, chain + ## HITS:1 COG:Cj0401 KEGG:ns NR:ns ## COG: Cj0401 COG1190 # Protein_GI_number: 15791768 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Campylobacter jejuni # 1 463 33 496 501 662 70.0 0 MSIAEFKEKFGYIKDTEDKKASEEVSLAGRLKLKRVAGKSTFANIEDQSGNIQIYYSRDS IGEEDYAKFKKNLEVGDIILVRGYAFVTQTGEFSIHASKITLASKAICPLPEKFHGLVDI EMRYRQRYLDMIMNPEVREDFIKRSIIVSEIRSFFEKHGFLEVETPMMHPIAGGANAKPF ITHHNALDVDRYLRIAPELYLKRLVVGGMEAVFEINRNFRNEGMDLTHNPEFTSIEFYWA WHDYNDAMNLTEELFKALFKRLRLGEILTYDEREIDFSKPFARIKYLDALTQIGGIEPQI VNDREKIIAKLKEDKFEVNEKLDLGHLQSELFDNYVEAKLINPTFIVDFPISISPLSRRS DENPQIAERFELYIAGKELANAFNELNDPLDQYARFKAQIDAKNAGDDEAHEMDEDYVRA LSYAMPPTTGWGLGIDRLAMILLNKKSIRDVILFPAMRPLNLEKE >gi|257442393|gb|ACYG01000024.1| GENE 89 100561 - 101808 1658 415 aa, chain + ## HITS:1 COG:Cj0402 KEGG:ns NR:ns ## COG: Cj0402 COG0112 # Protein_GI_number: 15791769 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Campylobacter jejuni # 3 415 2 414 414 677 78.0 0 MSNLEKFDNEIFSLTNKELARQCDYLEMIASENFTYPEVMEAMGSVLTNKYAEGYPGKRY YGGCEFVDEIEQIAIDRCKKLFGCEFANVQPNSGSQANQGVYAAFLKPGEKILGMALSHG GHLTHGAKVSSSGKMYESFEYGVELDGRINYDKVLEIAQIVKPKMIVCGASAYTREIDFA KFRQIADSVGAFLFADVAHVAGLVVAGEHANPFPHCHVVSSTTHKTLRGPRGGIIMTNDE EFAKKINSAIFPGIQGGPLMHVIAAKAVGFKHNLSPEWKVYAKQVKANARVLGETLVGRG FDLVSGGTDNHLILMSFLNRDFSGKDASAALENAGITTNKNTVPGETRSPFVTSGIRVGS PALTARGMKEKEFEFIGNKIADVLSDISNSKLQAQVKEEVRDLAHRFIIYDRAMY >gi|257442393|gb|ACYG01000024.1| GENE 90 101908 - 102939 1223 343 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1352 NR:ns ## KEGG: CCV52592_1352 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 11 343 6 286 286 72 27.0 3e-11 MNDKNFDMSSIDDIVINSGNVDKNANLKKGLTVAAGVVVLFLIILIIMKAINKDDIDTNA GLTMPSEEELAKAEQKPTVQVQKPEPSQSEPVEVKSEPNAASAAPTKVEIKTQEPNSESK VVASAQPEAQKVEIQKPEIKEEPKKSEVKIESKKIEPKDEAKKPEKTDVKKPEPKKESAK DEIKKEPSKTEIRKVEQKVEPKKEPEKQAKTEVKKEPSKTEAKKEHAKAEVKKEPAKPES KKEASKPESKSESVKAGVAAKSTSTSVANGSYVQVFASNAYDPNGSDTKKITKKGYSPIA LQTHVGSKSVTKILVGPFEGEALQKALSDMRSINSGAYIYRVK >gi|257442393|gb|ACYG01000024.1| GENE 91 102939 - 103724 600 261 aa, chain + ## HITS:1 COG:Cj0405 KEGG:ns NR:ns ## COG: Cj0405 COG0169 # Protein_GI_number: 15791772 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Campylobacter jejuni # 1 241 1 242 262 213 48.0 3e-55 MDRFAVFGNPIAHSLSPLLHNYAIKFLALDAYYGRVLLQHGEELRAKFEALKLAGANITV PFKLDAFKACDILSEAAQKIGSVNTLVLKGDALQGFNTDAQGFFCAILGFGEIRNALILG AGGTTRAIGYALSKNGVKFDILNRSAKDFDFGCEEFFSYENFKSKDYDLIVNATGAGLKD DALPAPEGVIDEILSRAKFAFDAIYGKQTPFLQAACAKNLPAKDGKEMLINQGALAFNLF FGGKFDLAEIVSLMSHAANLR >gi|257442393|gb|ACYG01000024.1| GENE 92 104203 - 104409 306 68 aa, chain + ## HITS:1 COG:no KEGG:Despr_0568 NR:ns ## KEGG: Despr_0568 # Name: not_defined # Def: hypothetical protein # Organism: D.propionicus # Pathway: not_defined # 5 67 14 76 88 63 44.0 4e-09 MFFGKILKFYAHGFASMKLGKTLWAVILIKLFIIFVLLKFFIFDENLDSKFKTDQEKIDF IYKNLTKE >gi|257442393|gb|ACYG01000024.1| GENE 93 104412 - 105935 1857 507 aa, chain + ## HITS:1 COG:Cj0081 KEGG:ns NR:ns ## COG: Cj0081 COG1271 # Protein_GI_number: 15791471 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Campylobacter jejuni # 1 507 1 505 520 685 67.0 0 MQELASVDWSRAQFALTALYHFLFVPLTLGLSFIVAFMESLYVATGKQEWLKITKFWLRL FGINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAIEGLLAFFLEATFFAVMFFGW DRVSKKFHLLSTWLVAIGSNLSAYWILIANAWMQNPVGTSFNPDTMRNEMSNFLDIALSH FGVAKFLHTVGGGYITGALFVLGISAFYMLKNKDFALAKKSFIVAASFGMLSSLFVLFSG DESAYQVAQKQPMKLAAMEGLYKGEVNAGIVAAGVLNPSKTAGDDKKPFLFEIKAPYALG LMATRGLDNFTPGIDDLVFGNEKFGIEGADKKIEKGKIALQALKDYKLAKDANDTAAMQQ AREILFGNQSMQNLGYGYLDDAKQIVPPVALTFYSFHVMVALGSYFILLFFVTLFLAMRK NLAEYKKILWLCVFSIPLGYVACEAGWIVAEVGRQPWAIQDLMPVGVAATSLAGTNIMIS FMLFAVLFTVLFIAEIKIMLKQIKIGF >gi|257442393|gb|ACYG01000024.1| GENE 94 105937 - 107043 1387 368 aa, chain + ## HITS:1 COG:Cj0082 KEGG:ns NR:ns ## COG: Cj0082 COG1294 # Protein_GI_number: 15791472 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Campylobacter jejuni # 3 368 8 372 374 351 56.0 2e-96 MHEIFQIYWWCVVSLLGGILVFMLFVQGGQTLLFTLAKSETEKDFIINSIGKKWELTFTT LVMFGGACFAAFPLFYATSFGGAYWAWMALLFCFIIQAVAYEYRKKPDNFLGAKTYEAFL FINGSLGTILLGIIVSTLFSGSEFALGDNNFVQWKNPARGLEALANPFNYILGFALFFCA RTGASLYLMNNIAEPEMIAKLKASLKFNASAFLVFFIAFLAWVLLKQGYAVGADGIVSLE SFKYLHNYLSLPVALVLLLLGVVLVLVGIVKGAFTSSVRGIFSYGVGVVCAVTSVFLILG LNNTTFYPSNFDLQSSLSISNASSSLYTLKTMFYVSFLVPFVLGYISYVWRAMDAKKLDK EGLSNEHY >gi|257442393|gb|ACYG01000024.1| GENE 95 107654 - 108622 902 322 aa, chain - ## HITS:1 COG:Cj0182 KEGG:ns NR:ns ## COG: Cj0182 COG1133 # Protein_GI_number: 15791569 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Campylobacter jejuni # 53 321 120 400 401 289 56.0 5e-78 MFVSFFKNKKWAFWAYSGIFFLIAINWYQTTLNVRINEWYRAFYDMCQNIDRHTLGDFYT QMKVFLWIAMPYVVSAISERYAARIWTFKWREAMTFSYFSYWKKVSKDIEGSSQRIQEDI FRFSRTIEEMGTRVLSAAMTLFAFIPVLWGLSSNVPFEFLKKIPGSLVWIALAISIGGLI ISWLVGWYLPRLEYNNQKVEAAFRKELVFAEEDKINYASEEKILSLFDKIKYNYFKLYLH YCYFDMWFNSFSQFLMIVPYLIMGPGLFTKVITLGVMVQVSNAFNQVRGSFSIFMNNWTT ITELRSIHMRLKEFEKNIDYKG >gi|257442393|gb|ACYG01000024.1| GENE 96 108622 - 111354 2420 910 aa, chain - ## HITS:1 COG:HI1368 KEGG:ns NR:ns ## COG: HI1368 COG0612 # Protein_GI_number: 16273278 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Haemophilus influenzae # 1 897 1 919 926 218 22.0 3e-56 MKKLIFFISALLCSLSLYSADTNPDAPLKLDPSVVHGELANGVKFYILKNDVPKNSALFY LNVAAGSVDENDDEQGLAHFVEHMAFNGSEHFDKNELVHTLQRLGVKFGADLNAQTGFEN TTYNIQAQVSDDTLKDVFLVLRDYAGGVKFDENETQKEKGVILEEAKKGFERRFYEKRAT YLYPNSIFSRRFPIGQNEIIKGATGEQLKKFYVRNYLPSAISIIVVGDVNVEQIKNLIKQ NFSSLSAYGEKIPRDLSLRPFEGGLASTVEPELGTNVASVLYAGKYEPLRSYDALKNEWL QAYVSRLMELGYDAMNVNAKIPLKAYFGSDDLFKNRRLYSISANIFNFDANATLNSLFSA IKGVREHGFNNDDFDSVKAEFKHQVQADLLKNDTQSAQIGALLDFVQNGNVKLSKQDEHD LSLKALEEITLADVNKFFSQITDGARFTEIISAKDLGISQKDAELLYEKAVPFNFAASKL TSKQLAGADLKEAEFKAQKGASGTEILEFKNGAKVILKPLKSEKNKIALAAVKKGGYAHF GKARGEILTALLNSGTIGELNEYEAGRLTSKFDYKLRFRMDDADCGFRGAGVDLEAMAHE LYARFSEPLIHASSLTKYKTDALSAIALRDETAEFKFGEQILKSLYSGDTARKQPLSADD VKSANLADLQRDADEIFAGAGNFIFVLSGDFEPARAKQILAKYIGNLKPGVNSATPKTLM LNTSSGEIVQDYGDSDKSEVRMIFSNYELQNFDFADTYKFQALKSVLSNRIVEQIREARG QIYSAMVHSAYVREPQIAASLNVSFSTEPKDTRAVAASVSEILKQIESSGAKDSELANFK KAQILSTKRAAQTNDFWLGNITAHELYGYPLYDEKSYAASINAVKSTDVQKAAQMLSDRL FTAILNPKER >gi|257442393|gb|ACYG01000024.1| GENE 97 111705 - 112301 811 198 aa, chain - ## HITS:1 COG:Cj0334 KEGG:ns NR:ns ## COG: Cj0334 COG0450 # Protein_GI_number: 15791702 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Campylobacter jejuni # 1 198 1 198 198 353 83.0 9e-98 MIVTNKAVDFTATAVLGNNEIVEDFNLYKNIGEKGAVVFFYPKDFTFVCPSEIIAFDHRY QDFKSKGIEVIGVSCDSEFTHLAWKNTPVNAGGIGKVQFPLVSDITKDIARSFDVLFGNA VALRGSFLLDKDGTVRHAVINDLPLGRNIDEMLRMVDTMLFTNEHGEVCPAGWHKGDAGM KADPKGVADYLGKNASKL >gi|257442393|gb|ACYG01000024.1| GENE 98 112482 - 112766 514 94 aa, chain + ## HITS:1 COG:Cj0333c KEGG:ns NR:ns ## COG: Cj0333c COG1145 # Protein_GI_number: 15791701 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Campylobacter jejuni # 1 94 1 94 94 140 85.0 4e-34 MAVKITDICISCGSCIDECPVNAIVDDSDNPSGEDSYYVYADKCVECVGYNDEPACASAC PTDGCIVWSDIVAGQPSRDSIGADLRSGDTPVFA >gi|257442393|gb|ACYG01000024.1| GENE 99 112874 - 113287 519 137 aa, chain + ## HITS:1 COG:jhp0184 KEGG:ns NR:ns ## COG: jhp0184 COG0105 # Protein_GI_number: 15611254 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Helicobacter pylori J99 # 2 135 3 136 137 200 78.0 7e-52 MQQTLSIIKPDAVKKDVIGKIIDRFESHGLRIAAAKKVCLSAEDAGKFYEIHKDRPFYKD LIEFMTSGPVVVMVLEGDDAVAKNRALMGATDPKKADKGTIRADFADSIDANAVHGSDSL ENAKTEIAFFFAKREIC >gi|257442393|gb|ACYG01000024.1| GENE 100 113297 - 113650 193 117 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1489 NR:ns ## KEGG: CHAB381_1489 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 117 1 117 118 127 52.0 2e-28 MKIAFAKISASPVPFEISRDGLKLSGNLKRKDSKFIECKGEIKGKIPYICDRCGKEFDLD INESVNLLLSEGVFNDERHESLDVMEFFGAEVDLDEILRSETEAFKSDYFYCEECKN >gi|257442393|gb|ACYG01000024.1| GENE 101 113669 - 113815 245 48 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223038613|ref|ZP_03608906.1| ribosomal protein L32 [Campylobacter rectus RM3267] # 1 48 1 48 48 99 91 1e-19 MAVPKRRVSKTRAAKRRTHYKVTLPIPVKDKDGSWKIPHRINKTTGEY >gi|257442393|gb|ACYG01000024.1| GENE 102 113820 - 114818 869 332 aa, chain + ## HITS:1 COG:Cj0329c KEGG:ns NR:ns ## COG: Cj0329c COG0416 # Protein_GI_number: 15791697 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Campylobacter jejuni # 1 326 1 323 328 394 62.0 1e-109 MISVAIDAMGGDFGCEPIINGVVDALQERKFNAFLVGDEAQIKSFIPQDQGFEKYITYVA ASEVFEMKEGATDALKRKESSIFKAVDLVKDGTCKAVVSAGHSGATMSLATLRIGRLKGI LRPAIATLMPNSIGGRTLVLDVGAYVDCKPENLFQFAIMGEAYAKEIMGLNAPRIGLLSN GEEDSKGNEVTKETFHMLKKMQNFIGNVEGNQIFDGSVDVVVCDGFIGNIMLKSSEGVAS AIGKLIKNETKKSPIAIAGSILMKRVFKIIKKSTDYDEYGGAPLLGVKECVIISHGKSTP KAVKNAIFQALKFADSKINSAIESEISSNEQK >gi|257442393|gb|ACYG01000024.1| GENE 103 114815 - 115813 926 332 aa, chain + ## HITS:1 COG:Cj0328c KEGG:ns NR:ns ## COG: Cj0328c COG0332 # Protein_GI_number: 15791696 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Campylobacter jejuni # 1 330 1 323 324 420 67.0 1e-117 MKKASMISIAAYAPSQILTNFDLEKMVETTDEWIVKRTGIHERRIAKGESTSDLGMKAAA LAIERSGLQKNEIDAIICATISPDYFCMPSTACVIADKLGLNFGITAFDINAACTGFIYL LELAKSLIESGAKKHVLIIGTEKLSSIVDWSDRATCILFGDGAGAAVIAARDDNEIIDIH TASDGSKGDLLITAAPGSVNPLSQKIIDEKLGFMQMAGREVFKIAVPTLSNDVVEILAKN KISPEQVDLFIPHQANLRIIEAVKARLEFSDEQCVLTIGKYGNTSSASIPMAINDAYESG RLKNGSLMLLDAFGGGFTWGSALLKFGGKSVN >gi|257442393|gb|ACYG01000024.1| GENE 104 116757 - 117680 856 307 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0341 NR:ns ## KEGG: CCV52592_0341 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 298 1 299 311 367 60.0 1e-100 MLKEKIRNGKSGILLYGIVPPKITSSQDELERLGTAWSQRLGECECDGIVIYDLQDESAR TKDERTFPFVHTIDPARYYTQYLHTDKEAIIYRAVGKYDEAEFCEILRHAASGLGVFVGA SSKNEECKLHLSRAYEIKRLVAPHLCLGGICIPERHEKSRDEHLKIAEKTADGCEFFITQ AVYNVQNAKDFIDDYAALECKKVPIIFTFTPCGSLKTLEFMKWLGISVPDFLQQRLQSSV DILQSSTALCAEMFDFIYKYALAKGVSVGANVESVSTRRVEIEASLSLLKEIRKIILKHE NLGFYVI >gi|257442393|gb|ACYG01000024.1| GENE 105 117775 - 120066 2694 763 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1505 NR:ns ## KEGG: CHAB381_1505 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 763 1 753 753 929 63.0 0 MKTLQENLKLFYLGLENGEPFLYKNKDLTTHALIIGMTGSGKTGLGITLLEEAAIDNIPS IIIDPKGDLTNLALTFPQMRAEDFEPYIDETEAQNKGLSVREYAEQTANTWREGIEGSYQ DLARVELLKNSADFRIYTPKSSAGLGISLLSDFEAPKGLNEEDLNNYVGGIATSVLSLAG ISSDNLSSPEFLLISQILTYHFNKGEGVSVVDLIAQIGNPPFDKIGVFDVNTFFPSDKRM ALAMKINALIASPSFKLWCEGERLNIAKMLFDENGRARANIFSIAHLNDDERMFFVTLLL GEMIKWMRTTSGTSSLRAVLYMDEIYGFFPPNGNPPSKTPMLTLLKQARAFGLGCVLSTQ NPVDLDYKGLSNIGTWFIGRLQTAQDKERVISGLSGIGSNPIDKSVLMEKISNLKKRSFL VKNINEDVLRVIETRFALSYLKGPLSNEQISNLMKDKKAEISSVSGAAQGVKSAGAAKPV VSAEISQLYSYGASLELSPYLYASAKMRFCDKGVDFTQQRTYLLALSDVSEIDWSEASTR EVANLSGQEQAGSLYGALPSFIAGAKNLNAQLKSFKEWLYRNERLELFSALDLLSKPGES REEFFVRLGDRANEALEAKTDEITAKFEKEKARLEDKISRASEKYEKEKGDVLSRGVDAA LNIGGAILGAFLGRSRSAGNISKAISGAKSAHKILNERSEAKNAQNSLNALQDELEVLTQ KFEAEVDALKQSLDLKNIKLETKEISPKKTDIYDEKISLLWKS >gi|257442393|gb|ACYG01000024.1| GENE 106 120079 - 120822 753 247 aa, chain + ## HITS:1 COG:Cj0357c KEGG:ns NR:ns ## COG: Cj0357c COG0344 # Protein_GI_number: 15791725 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 47 247 3 202 202 183 52.0 3e-46 MDKLSEILNIIYAALCDPSSKYFLGDEHGILGSGILGILYRTFTAPNFWCYFAAYLIAAI PFGLLIGKYLGGVDIKSEGSGSIGATNVLRVLKTRDPQKAKKLAILTVACDALKGVLPIL IARALGFDENVLWGMAVFAVLGHCFSPYLKFNGGKGIATGAGVLACFIPIELIIALAVWF VVGKTVKISSVASLAAALALVIASYVIHPQMPSINTHAPIFLIVFIVFYKHAPNIARLLK GEEKRVV >gi|257442393|gb|ACYG01000024.1| GENE 107 120819 - 121136 295 105 aa, chain + ## HITS:1 COG:HP1510 KEGG:ns NR:ns ## COG: HP1510 COG1539 # Protein_GI_number: 15646119 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Helicobacter pylori 26695 # 6 105 9 113 117 61 31.0 4e-10 MIKILIEKLEFGAIIGTLDFERKREQRVWVWAKLGAEEFIDYARVCEYIKAEFREKKFRL VEDALRYFAQEFHSKFRSMDYFYMKILKPEILQDASVGAEIEIKF >gi|257442393|gb|ACYG01000024.1| GENE 108 121213 - 121884 876 223 aa, chain + ## HITS:1 COG:Cj0355c KEGG:ns NR:ns ## COG: Cj0355c COG0745 # Protein_GI_number: 15791723 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 1 223 1 223 223 359 78.0 3e-99 MRILIVEDEVTLNKTIAEGLMEFGYQTDTSESFKDAEYYIGIRNYDLVLTDWMLADGNGI DLIALVKQKSARTSVVVLSAKDDKESEIKALRAGADDFIKKPFDFDVLVARLEARLRFGG SNIIKIDDLIIDPDEEKITYLGQEIELKGKPFEVLTHLARHSDQIVSKEQLLDAIWEEPE LVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFCFPQKA >gi|257442393|gb|ACYG01000024.1| GENE 109 121923 - 123170 1108 415 aa, chain + ## HITS:1 COG:RSc2936 KEGG:ns NR:ns ## COG: RSc2936 COG0642 # Protein_GI_number: 17547655 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 133 390 195 470 500 102 27.0 2e-21 MLIVIFSVMLYNYMRITIFETPVQNLIQRAQKIVEASMPPEKISSFLQNTPGEYESKIIE NESINKPKFIESSEDGRSYLQLHYPYGKDKILSIKADVSVYANIVNQILIDIILVNLTMI FLVVFYAMFLSRMLLMPIKLISQRLASVDEKFLKPIDAAEIPSEFSPLSNSINRLLERIE TFILYQKELFIGIAHELKTPLAVMKTKNEVTLIKPRESDKYIEALKNNNDSIDSMNKMIS SILEIGRQEGAQFEAPEQTDMIAYLRELCVGFKILARTAGKDLTMDLKPEQLEISVQKSL FMHVIQNFIQNAIKFSPDGEKVLIESGISEGNFIVRVANKGEPLNEEIDYFAPFKRYGGK PGAGLGLFLAKNAAQAMGAQVDLKNDKARSLIVAIFKLPLKNLRNSPKFRYFKTK >gi|257442393|gb|ACYG01000024.1| GENE 110 123220 - 123465 362 81 aa, chain + ## HITS:1 COG:Cj0354c KEGG:ns NR:ns ## COG: Cj0354c COG1145 # Protein_GI_number: 15791722 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Campylobacter jejuni # 1 76 1 76 81 90 73.0 7e-19 MSLLITKECISCDACREECPNEAIFEDEPIYIIDADRCCECVDDYSEPACIVVCPVECII TDPDNIETADELKYKHVHMEI >gi|257442393|gb|ACYG01000024.1| GENE 111 123466 - 124908 1630 480 aa, chain + ## HITS:1 COG:Cj0353c KEGG:ns NR:ns ## COG: Cj0353c COG0248 # Protein_GI_number: 15791721 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Campylobacter jejuni # 1 477 1 480 486 412 48.0 1e-115 MPKRVAVIDLGSNSARAVIFERTSRLGFFILAEHKIKIRLGEGAYENGGILTSEAMQKCL LAFKKFKTLVCNYKAKRVLCIGTSALRDAPNGSEFINLVRKQTGIAIRKIDGQMEAYLGA YAAQNLLSDFSEGVTLDIGGGSTELAYIKNGRIENKISLNLGTVRLKELFFDRGDTKGLE KYINSAISQVGAEFRTQNLIVMGGSARALSGAVMSLQNHPLKIVHNFSYDYEKYAPFFAK LMSAKTLDLAKFPIKKDRYDTIREGAIIFDKIVRRLGAKKIITSGVGVREGAFLSSILRG ANLPRGFNPSLRSLKDRFASEPSEAPKFAKALFCALSPLHGLGEKYIKILQTAASLCEIG RAIGFYAKHETSADMVLGGLNYRTTHKEKALIAAIISMHGKRELGATFAPLSAILPDAGK LAWLSYILELARLLSENALKNLEFSFENSTLKISGADNLIMLKGSLKKLSKPAIFAIKFL >gi|257442393|gb|ACYG01000024.1| GENE 112 125006 - 126094 927 362 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1819 NR:ns ## KEGG: CCV52592_1819 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 355 1 366 366 127 28.0 1e-27 MKKFTNGKKEILLQTQGLSLISKTLQNGKERLSSKEFANCDALQKAFVKKQVDALKKGFI YENKKAKFGEAIAHAYIGGGYSGALGFAEFEDKFYVYKCNFDKHGCDYLIVLDGELRTLA QIKLPKILTWKMTATKKALVLDLDHEFFLFDGEKFSRLFEAWGITGGGFSSALSGNGEIL ACGTDGILAFGSDKKLNFKTEFSAKAIGFGNKICVACGDEGGKNVAMLYRLKDFAELCRI ECDVGYIHSLNVGLIKNDAILVVNNDFDELHFWNVASKKRLSVPKSLPRSVMRFAANDQI FLTYFYGGFKAFSLEDFRLLGEFECEHCVKTAAIEIAGERLYVRTDYGFFSVYSLAKNGI KI >gi|257442393|gb|ACYG01000024.1| GENE 113 126170 - 126475 453 101 aa, chain - ## HITS:1 COG:TM0487 KEGG:ns NR:ns ## COG: TM0487 COG2151 # Protein_GI_number: 15643253 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Thermotoga maritima # 2 99 6 103 104 89 43.0 2e-18 MKVTKEQIYDALRAVVDPEVGFDVVSLGLIYDVAVDEANNAKVTMTLSTQSCPLHEMMVE WVRAGAESVEGVGEVEIDLVFEPMWNIDMAEDHVKEALGRF >gi|257442393|gb|ACYG01000024.1| GENE 114 126472 - 127647 1161 391 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1841 NR:ns ## KEGG: CCV52592_1841 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 388 1 388 393 282 55.0 2e-74 MNITTFSPPFRIVGGYFICGFIFLLLSAASFLKADFGAIQAPQTASFFHVFLLGFVISII IGALYQLTSVIIQKEFFTVKFAFLNLLAYGAGVALLSAGLLFSSIPLMHAGGSALLLSLF YFTICYALSFIGTPKWSFPAVALAISAAFLAVGISLGFALVLALSGVEIFGVYFSEILSY HIYFVLGFVFFVIVGAACVLLPMFSLAHDLSFALAKASLALYLLAGLFLLKDFGIFIAFA ALASFAAQAIYILARRVRKAIDYWNLNVYISLAALVFSAAFWLADRADAAAFGLLYGFLF AFIVAHLYKIAPFLIWYHYVSPFVGKRKIPMLDDMIIKKIAYAACVPNVLALACAGLGAL TPAVILQAASIILVLINIVNIFNYIKFGEEK >gi|257442393|gb|ACYG01000024.1| GENE 115 127665 - 128009 594 114 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1840 NR:ns ## KEGG: CCV52592_1840 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 113 1 112 112 155 64.0 4e-37 MDFFTDWQEFDAAGATVKFYKKSQGGVEYIGFDSRKCVPPEPMVNALVALNFVKDETKKV VMVNHKFPMGLIPKIESKFDIAREDLDGDAVKLTISLKPGAVNEGFDTDAKCHG >gi|257442393|gb|ACYG01000024.1| GENE 116 128153 - 130969 3591 938 aa, chain + ## HITS:1 COG:Cj0338c_2 KEGG:ns NR:ns ## COG: Cj0338c_2 COG0749 # Protein_GI_number: 15791706 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Campylobacter jejuni # 358 938 1 580 580 662 55.0 0 MQTITIIDTFGFFFRLYYAMSGLKTKDGKPSGMVSGFASFIANLSKEFKSDYIIFALDSK GKTFRSDIDPNYKTNRQAPPPALLQQLPVCIEMIEKMGLYSLGREGYEADDLIASVVKKY GATHKINIVTSDKDLYQLIGENVKIYSHGKKMLYGREECLQRYGVYPEQIVDFLAICGDS ADNIPGVRGIGDKGAKKLLDEWGSLDEIYSNLDRLPQNKQREYLIEGKQSAYISKRLATL YDELEIPPLEDAKFPQQNPLFKIREILKDYALNRLLSALSLQEQNGLDLWGEGKGAGAKS SVLGAGGKGAGAESSRGGSILGAAVGGLDGQNSIPGGSACSEKNSESAFKTPFEPICITD AVELARLCESIDAETLVSFDTETTSIDSKSAKIVGFSFAFNEERAYYVPLAHSYLGAPAQ ISSDAAKAAIDSLFRGYVVGQNLKYDFEIVKNNFNIEPPARFADTMVLAWLLDPANAVGM DSISPRYLGYETVHFGDVVKKGETFASVELDAATIYASEDAWVTLRLYFKLKGLLEPALF KLAQELEFPFVRVLWQMQRCGIKIDVEMIKRLIGRNEKSLRALTDEIYELCGEQFNINSP AQLGAVLFERLGLPAAKRTKTGYSTDESVLKDLTALHPAVGKILDYRELFKLQSTYCEPL LQLALADAQNRVRSNFLQTGTATGRLASKNPNLQNIPARGTFAKNVRDCFLAEGGYSLIS LDYSQIELRLLAHFSRDPALLAAFRADEDIHARTAISIFGDAQPAHRTIAKSINFGLIYG MGAGKLSDSLGIARAEAKGYIERYFAAFSTIKEFLQSIKSDAKADGYVSTLFGRRRYFDF ANARNNMVYASYEREAVNTKFQGSAADIIKKAMVDISPLLNGEARLILQIHDELIFEVRD DLAQGFGARAQEIMQSAASLNVPLKTSLNIAKRWGELK >gi|257442393|gb|ACYG01000024.1| GENE 117 131607 - 132743 1362 378 aa, chain - ## HITS:1 COG:CAC0930 KEGG:ns NR:ns ## COG: CAC0930 COG0626 # Protein_GI_number: 15894217 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Clostridium acetobutylicum # 1 378 1 381 381 367 47.0 1e-101 MKIDTLIVKGIEAKSNPHNAVIPPIYLASTFVQESLDDFGKYAYSRGANPTRNAFEELFA KFEGSKYAFALASGMAATSAAFALLKSGDRVLLNNNVYGGTYRYVSGIFKNQGINYDLVD DLNLITEIPSDVKMVFIETPSNPLLRVTDIERISELAHKSGALVVMDNTFLTPYYQRPLE HGADIVVYSATKYIGGHADLIAGIVTTNDDELAARIQFMKNTLGATLSPTDAYSLIRGLK TLSVRFDRQSENTLKIIEFLRSNPAVEAVNFAGSHSASEKKIQDRQASGIGAVISLVLKP QYDYKTFARSLELFDLAVSLGGVESLICHPASMTHESYPRELQERIGISQNLLRLAIGIE NADDLIADLTAALEKSKK >gi|257442393|gb|ACYG01000024.1| GENE 118 132769 - 133503 508 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 239 245 200 43 5e-50 MIKFTNLTKRFGDHVVLNGISLEFRDGQTTVILGSSGSGKSTMLRCINLLEIPSGGELQL GEFKINFDAPHKTSEYHPFRAHTGMVFQSFNLFPHLNVLQNVIEAPVHVLKQPRELAEAN AMALLKKVGMVDKAGAYPARLSGGQSQRVAIARALAMQPEFLLLDEPTSALDPELEAQVL KTIAELAAEDRSLIIVTHNMGFARKIADRILFLDGGVIAFDGDAEEFFGSNDERIAKFIG AMSF >gi|257442393|gb|ACYG01000024.1| GENE 119 133503 - 134171 560 222 aa, chain - ## HITS:1 COG:mll3859 KEGG:ns NR:ns ## COG: mll3859 COG0765 # Protein_GI_number: 13473305 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Mesorhizobium loti # 8 221 5 218 226 204 55.0 1e-52 MNETSRILELVSSSLEPMALALLQVTIPLTIISFLLGLVLAVLTAVARIANFKILKQLSE IYIWIFRGTPLLVQLFIVYFGLPIVGITLDVWAAAIITFSLNIGAYASEAVRAAILSVPK GQWEAATSLGMSYAQILRRIIAPQAARISLPPLSNIFISTLKDTSLVASITMVDMFMVAQ RIAARAFDPLTLYVLAALFYLAVCTLLTFLQSKLERRFSRFV >gi|257442393|gb|ACYG01000024.1| GENE 120 134168 - 134917 854 249 aa, chain - ## HITS:1 COG:SMc03891 KEGG:ns NR:ns ## COG: SMc03891 COG0834 # Protein_GI_number: 15967027 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Sinorhizobium meliloti # 26 249 34 257 257 220 50.0 2e-57 MKNLIKTLLACALLICGANSKTLREGVLKVATEGTFSPFSYYNDKNELVGYDVDVARAVA EKLGLKIEFLTAPWDAMLAAFDAGKADAVFNQVSITDERKKKYEYSVPYTVVYGAIIVHK DNNDIKSFEDLKGKKNADSATSNWAQVAKKYGAQNVTVDSFAKSMELLIARRVDTVVRDN TVFYDFLKQRPDAPIKIAAKLKDVDYSAAIVQKGNKELADQINKALNELKAEGKLKEISL KYFGKDVSE >gi|257442393|gb|ACYG01000024.1| GENE 121 135011 - 135754 790 247 aa, chain - ## HITS:1 COG:SMc03891 KEGG:ns NR:ns ## COG: SMc03891 COG0834 # Protein_GI_number: 15967027 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Sinorhizobium meliloti # 25 247 34 257 257 223 50.0 2e-58 MKIFKALLATALITATLSAKTLKEGTLVIATEGTYSPYSFYDEKNNLTGFDVDIARALAK ELGLKAEFLTAPWDAMLAAFDAGKADIAMNQVSITQERKKKYNFSEPYTVAYAALVVRAD NEEIKSFADLKGKKSVHSATSNWADMARSYGAEIVTADGFSKGVELIIARRADATINDNI TFFDYMKQRPNAPLKIAAQGNEPIYSAVLLKKDDELTAQINSALKSLKQKGVLKEISLKY FGKDITE >gi|257442393|gb|ACYG01000024.1| GENE 122 136422 - 137972 1580 516 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 24 514 23 475 484 170 31.0 5e-42 MENVSRRDLLKMSLVGAGALALGSVNANAAVNAKDVKFDEEWDVVIVGSGFAGLAAGITA AEKGNKVLILEKMGRVGGNSVINGGIFAVPNSDKQKAEGIKDSNELFIKDCLKAGRGLNH VDLIDTIATRAQDAYKLTLKCGAKYIDKVTHAGGHSVPRSLQTANGSGSGIVQPMVEYFK NLQGCELRQRAKFDEFVLGEDGGVDGVIIREDYKFDPKSQKDDAENTTGTKKTIKAKKGV VLAAGGFCRDVFFRQVQDPSILPTTDSTNHPGATAGAMKEAFRIGATPVQLSWIQFGPWA CPDEKGFGVGSMFNVNGSFRYGISVDPRTGKRYMNELADRRTRSQAMFKVIDAKADIYPI NFCDSEGVKNMVIPEHYTKPLESGVLKKFETLDELAAAYKIPAAELKKTVERYNSFVKSG KDEDFGKPMDKTTTNGVDISKPPFYAMRGTPKLHHTMGGIDINTKAQVISLQTEMPIPRL FAAGEITGGVHGASRLGSVAIADCLTFGMIAGENIG >gi|257442393|gb|ACYG01000024.1| GENE 123 138237 - 139064 872 275 aa, chain - ## HITS:1 COG:all1517 KEGG:ns NR:ns ## COG: all1517 COG0535 # Protein_GI_number: 17229009 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Nostoc sp. PCC 7120 # 12 274 44 310 475 263 47.0 3e-70 MNFFAKPSFDNHPCFSKKASASYGRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQ SPDEAALYVENLFKFRQDISVIGIAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGL SLPEHVDDIVRIGVSHVTVTVNAVTPDVGGKIYAWVRHKNKIYHGEEGARILGERQEEGI RKLKEARMIVKINTVVIPGVNMDHVPRIAKKAKEWQADIMNCMAMIPVQGTPFANIKSPS NEEIRSMRKLIGGSMAQMTHCSRCRADACGKLCEK >gi|257442393|gb|ACYG01000024.1| GENE 124 139064 - 139840 556 258 aa, chain - ## HITS:1 COG:yccM KEGG:ns NR:ns ## COG: yccM COG0348 # Protein_GI_number: 16128958 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 76 246 109 288 357 73 27.0 4e-13 MFSIVNMAKMKKVSRLTKIRRLVQLIFIGAIGQWAYYGIFRCPFIVPFVNCQSCPIVTCW GRIATVFFGFWLFIPVLVIFLGRAFCGWLCPGGFVNQMLGKFAAFKLKLKNNRKLRYAQI GMVLAVLLCLGVYFIYGNPRVMIPIRTSDEYLNAVIMSFKFSDWYWAVRTAVVVALIAAS LIVANLWCRFACPSGGIMELLRKISIFRVYKTDACDNCNACLRKCEMGTRPDEMNCTNCG DCMDVCHADAIKFGRKKD >gi|257442393|gb|ACYG01000024.1| GENE 125 139833 - 140693 911 286 aa, chain - ## HITS:1 COG:MA0325 KEGG:ns NR:ns ## COG: MA0325 COG0725 # Protein_GI_number: 20089223 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 36 271 38 271 271 81 26.0 2e-15 MKFKEIDESRRGFLKGALAAAAIARPEAMLAGYTPFKPGSLQVWSCGGLSEAFNELNAIY ESRTGHNIQYTGAFAGALGKSLLALQGKTEVFGARVLELSQKLRKAGLSLRFRPLCFTDY VLVVPKGNPAGIRDLKDLAEPGVRVMLPLRASPPGSGPVKGILKNSGLTGSVMKNMVANG SCVIQMMCDLVDGKGDASIIEKRLTTHDRFKDKIEYMPIDEKLIPPGPLTFTLNIMKYVK DEKLADDFSDFVCSVEGQEIFERHGFTSIHSARGLELIERFGVKDV >gi|257442393|gb|ACYG01000024.1| GENE 126 140766 - 141875 1192 369 aa, chain - ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 5 369 21 390 390 321 43.0 1e-87 MKMDFDTLKKRNAMALHDLKEQGKHVVGMFCTYSPKELIYAAGAVPVGLCAYDESPIDAA HAELPRNLCPLIKASYSYAVTKKCPYMNASDLVIGETTCDGKKKMYELLAKHKDVHVLQL PNMAGGKSLELFTDELRKFRKVLEQKFNTKITDEALLDAVQIYNEERKVMMELLELGKLN PMPVAGSEIHQISFASDFIYDKREKLKMIRAYIAAAKKISPPKTRKKRIIITGCPSGGVY EKVIKQIEDLGADVVAFENCTGTKNFKNNVETQGDLVANIAERYLKIPCSVMYQNNARSE VIKNFVRDYAADGVIDVVLSGCHTYAIETNKIKEASREAGANYMSLETDYSKQDVGQIRT RLEAFIELL >gi|257442393|gb|ACYG01000024.1| GENE 127 141872 - 142597 808 241 aa, chain - ## HITS:1 COG:ECs5297 KEGG:ns NR:ns ## COG: ECs5297 COG1924 # Protein_GI_number: 15834551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Escherichia coli O157:H7 # 11 231 28 250 255 155 39.0 9e-38 MDERGEFCELFLLPSGFSAVKVARQIKQALEQKGYGEGFVTATGYGRVSVEYAQLSMSEI LCHGLGAHFLFEQDCTVIDVGGQDTKAIKIENGKPADFIMNDKCSAGTGKFLEISAGRLG LELSEIYKTARKNPAIKISSTCTVFAESEIVSLSANGAETSEIAYAIVDSSAHKVASLIK RLENQIYFLSGGLSNVPLFKQLLGEHLGAKIFTCENAIYCGAMGAALIGARKANEILKET R >gi|257442393|gb|ACYG01000024.1| GENE 128 142799 - 143677 882 292 aa, chain - ## HITS:1 COG:Cj0385c KEGG:ns NR:ns ## COG: Cj0385c COG0697 # Protein_GI_number: 15791752 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Campylobacter jejuni # 1 274 14 289 310 194 42.0 2e-49 MLVASFYFALNGALAKVMAEHMSSAEIVFFRNVVGIGIVLFSLRRVKNLGPGGKPWLLAF RGFIGSCGILATFYNIAHIDLGTAFTFQKTAPIFTALFSAFFLGEKLSSRGWFAILLGFG GILLVVRPHIGISVTDAVGIFGGMCAGLAYTSVRELRKHYATNLIVLVFVSSATFLSAMM MAAGWALGDSEVKILGLFSGADLARLAYFNLPSLLGWVLVALLGVSGIYFQIYMTRAYAA SRKAGIVAAISYSDILFSMALGIMLGDHLPGPIVLAGIAVVILSGILIARER >gi|257442393|gb|ACYG01000024.1| GENE 129 143738 - 144643 948 301 aa, chain - ## HITS:1 COG:Cj0385c KEGG:ns NR:ns ## COG: Cj0385c COG0697 # Protein_GI_number: 15791752 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Campylobacter jejuni # 9 282 7 288 310 208 42.0 1e-53 MKYNNFLLHHLSVYYMLVACFYYSLTGVFAKLLGAQISSLEVVLFRNLPGLLILLYKIKA RPRTARFANKGGHPFTLAFRGIIGILGLMVFFYNVANISLGEAFTFQKTASIWTAIIAYF TLGEKFGAMGWFSVCLGFVGIVLVIQPQFGLQPSDIFGILSGLFAAMAFTSVRGLRKYYS SDTIILSALLAGTLMPVALMIAAEFIDAPALSFMLCKFKIPNAQGWLFAVLLGLLGLFYQ TYVTKAYAATRKAGIVATISYADIIFSTLFGLLLGDALPGFMALGGMALIIAAGALVANR K >gi|257442393|gb|ACYG01000024.1| GENE 130 144910 - 145104 59 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIRAPARRLKRLDLPTLGRPMMIKLFTFVLLIFGAIITKNRLKPNSTRSLAQVGRQNFI KFKR >gi|257442393|gb|ACYG01000024.1| GENE 131 145022 - 146407 1517 461 aa, chain + ## HITS:1 COG:Cj0386 KEGG:ns NR:ns ## COG: Cj0386 COG1160 # Protein_GI_number: 15791753 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Campylobacter jejuni # 1 461 1 459 460 535 58.0 1e-152 MKSLIIIGRPNVGKSSLFNRLAGARIAITSDVAGTTRDTNRAEAEIFDRRVRVIDSGGLD DTSELFARVQAKTLSEAKSADLIIFMTDGKLLPSDDERRIFFSLQRLGKPIALAVNKIDG KRDEERSWEFNEFGVKFFPISVSHNSGIDELKEWIYGFLDPAPARQDEDEIFDDFIEGFN DEGEPKEGRDEEFYASKTIGVGIIGRVNVGKSSLLNALVGSQRSVVSDYAGTTIDPVNES TEFGGRTLEFIDTAGIRRRGKIEGIERFALNRTEKILQNSDITLLVLDASEPLNELDERI AGLAAKFELGLIIILNKWDLCERDYDEFCRDLRDRFKFLSYAPIISVSATDKKRIHKIYP LILEVYSNFTRKLGTARINEAVEAAIKAHPIPRERGKSVKIYYAAQIGFAPPKIALVMNR PQALHFSYKRYLMNRLRASFALSGSPLVLLPRKKGESDEEQ >gi|257442393|gb|ACYG01000024.1| GENE 132 146394 - 147365 1022 323 aa, chain + ## HITS:1 COG:Cj0387 KEGG:ns NR:ns ## COG: Cj0387 COG0703 # Protein_GI_number: 15791754 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Campylobacter jejuni # 1 165 2 160 165 120 43.0 4e-27 MKSSNIVLIGFMGVGKGTVARALAAQSGMFALDCDDMIESYANKKIGQIFKEQGEQSFRK MEESLAKFLEKSVRCAVISTGGGFYAVKNLNKIGTVVYLKSSFEGIINRLKNSENAEKKF AKRPLLADLQKAAALHAQRNGAYEKKADIVIDVENKSVKKIVKEICSACDGLNLKGKKMS KQKRSGGGKNSEPHGKEGKDDKLEKKEALKQKLRELIEGLEREEIPKRVIAWHFDLYEPY ALELAGSSSFDADDNDWACEDEDEFYPQSSRLQLEFLSELSWRQVLKMLVQALRELREQM PSAKIFECKHVAAGFVDGDLILI >gi|257442393|gb|ACYG01000024.1| GENE 133 147376 - 148344 1043 322 aa, chain + ## HITS:1 COG:Cj0388 KEGG:ns NR:ns ## COG: Cj0388 COG0180 # Protein_GI_number: 15791755 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 320 1 319 319 435 68.0 1e-122 MRILTGLQPSGKLHLGNYFASIKQMVDAQNAGEQMFMFIANYHALTSVSDGAKLKSSTYE AAAAFLSLGIDPKKTVFWVQSDVKEVLELYWILSGYTPMGLLERAHAYKDKIAKGFESKH DLFSYPVLMAADILLYSAEVVPVGKDQIQHVEIARDIALKFNNAHGEILTIPQARVNDEV AIVPGTDGAKMSKSYGNTIDIFADAATLKKQISSIVTTSEPLEAPKQWRGCNVYNIAKLF LSEAEQAELQARYERGGEGHGHFKAYLNELVQGYFKDARDKFEYYQSHREILDEMLRQGA QRAAATAASLMQKVRAAVGIYR >gi|257442393|gb|ACYG01000024.1| GENE 134 148355 - 148855 480 166 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0205 NR:ns ## KEGG: CCV52592_0205 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 135 3 130 153 101 49.0 1e-20 MTDYAREILSDGKLLRQKLEIFLQTPSKVEIYARACEKFFAAGKQRELNYVSTWSWWAFF GTLFFFLYRKEYKIAAALFAFVVISCFIPFLDEYDRSIGMAVSVSSGTMAKYFVCYRFVA LLDKQDDEALRRGGGVNRWAIWLAVVFYALVAIVFALIISNGGKIQ >gi|257442393|gb|ACYG01000024.1| GENE 135 148906 - 149172 512 88 aa, chain + ## HITS:1 COG:SP0238 KEGG:ns NR:ns ## COG: SP0238 COG3830 # Protein_GI_number: 15900174 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Streptococcus pneumoniae TIGR4 # 1 88 1 88 88 120 77.0 9e-28 MKAIVTVIGKDKVGIVAGVSAKLAQLGLNIDDISQTVLDEFFTMMAVVSSEEKQDFTALR EELNELGEKLKVKINIQSSAIFDAMHNI >gi|257442393|gb|ACYG01000024.1| GENE 136 149182 - 150519 1913 445 aa, chain + ## HITS:1 COG:SP0239 KEGG:ns NR:ns ## COG: SP0239 COG2848 # Protein_GI_number: 15900175 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 445 1 445 445 684 86.0 0 MDIKNVTETITMIEEQNFDIRTITMGISLLDCIDPDMGKAAEKIYAKITDKARDLVKVGN EISAELGIPIVNKRVCVTPIAIIGAATNAADYVPLAKAMDEAAQKVGIDFIGGFSALVQK GYAKGDKILIDSIPAALAATQKVCSSVNIGSTKTGINMSAVADMGRVIKETARLSDLGAA KLVVFANAVEDNPFMAGAFHGVGEAEVVINVGVSGPGVVKRALEKVRGASFDVVAETVKK TAFKITRIGQLVGQMASECLGVKFGIVDLSLAPTPAVGDSVARVLEEMGLERVGTHGTTA ALALLNDAVKKGGVMACNQVGGLSGAFIPVSEDEGMIAAVRAGSLSLEKLEAMTAICSVG LDMIAIPEDTPEQTIAAIIADEAAIGVINQKTTAVRIIPKGKEGDTLEFGGLLGSAPVMS VNKNSSADFIARGGQIPAPIHSFKN >gi|257442393|gb|ACYG01000024.1| GENE 137 150545 - 150958 432 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460136|ref|ZP_05625240.1| ## NR: gi|257460136|ref|ZP_05625240.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 14 137 14 137 137 255 100.0 7e-67 MRAFALFAAALLFSGCSIISAFYSKEKKFELAGLGQDGVYRTSDGSTDTLIKIMSARTKE GEPYRIIHTLEIPKNSTQTDFDSNDKEVFKIDCSKNYCEPKYDEEPKRIAISWPAPNGGG IFDGVIYLENLRLVKAY >gi|257442393|gb|ACYG01000024.1| GENE 138 151394 - 151831 484 145 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1473 NR:ns ## KEGG: CCC13826_1473 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 4 144 1 146 150 180 65.0 2e-44 MQKMAWKFGELEKVATDEGFIWYAEPKSKSFGEVPFCLVSADTADVDDAGSCSRSDAWDI DRYVKDALIFLRDELRREYRLSEDELRLLDAPVCDLPFGLPQCTFYARDTQWLLGPGALD ICEPFGIGVIFEGERPLRVENLEFC >gi|257442393|gb|ACYG01000024.1| GENE 139 152130 - 152543 172 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460138|ref|ZP_05625242.1| ## NR: gi|257460138|ref|ZP_05625242.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 137 38 174 174 243 100.0 5e-63 MVFLAFLFGIASVVSRLISYVDIQMPEPLLFCVAVVLSICLTAFCLKCYKTKKYSSFFIK NQDVSLTIFTFENTASLVLVLFPTLLFLSSAMGGSRDELSGAGTLYGVFIAPICILVFLL CYFFNRGTYIPKDDKFC >gi|257442393|gb|ACYG01000024.1| GENE 140 152747 - 153337 149 196 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460139|ref|ZP_05625243.1| ## NR: gi|257460139|ref|ZP_05625243.1| hypothetical protein CAMGR0001_0551 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0551 [Campylobacter gracilis RM3268] # 69 196 1 128 128 245 99.0 1e-63 MKAIRNFYEWLSIWDKIKICFCLILVAYAWYYIVALSNPKDLSDLKITDGIITGFTSDSA LRGGSWWLLQFYDSERKAVEKVSLGLNYKGIDEFYIYDKQRDILRFDLLQDRKVRIWYSK FPFPFKTKTAYQILILDDNLGERESIKGHRYFMRFADRGYYITPKKWFMLAMSHMVLIFI VLDTISKFKRENCDKL >gi|257442393|gb|ACYG01000024.1| GENE 141 153494 - 155470 2113 658 aa, chain - ## HITS:1 COG:Cj0680c KEGG:ns NR:ns ## COG: Cj0680c COG0556 # Protein_GI_number: 15792029 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Campylobacter jejuni # 4 658 2 657 657 963 75.0 0 MQNFKIESKFSPSEDQEKAIEGIVAGFQSGNKYQTLLGVTGSGKTFTMANIIKRLGIPAL VMTHNKSLAAQLYSEFKGFFPQNHVEYFISYYDYYQPEAYIPRQDLFIEKDSDVNQELER LRLSATASLLSFDDVITVASVSANYGLGDPAEYKGMVLFFEIGSKFSTKFLLRKLVDMGY KRNDDFFDRGNFRVNGDVIDIYPAYFNDEAFRIEFFGDEIEAMYHLDVLENKKTQSVKKF ILYPTSQFIVGEQRLKSTIKGIEEELEQRLKFFEDAGKLVEAQRLKGRVEFDLEMLGATG MCKGIENYARYLTGQKPGETPYSLFDYYESKGKDYLVIVDESHVSLPQFRGMFAGDRSRK ETLVEYGFRLPSALDNRPLMFDEFINKKAKFLFVSATPNDYELQLSRGAVYEQILRPTGL LDPQIILKDSDNQVEILHDMAKEVIARGERILVTVLTKKMAEELSKYYLELGLKVKYMHS DIDAIERNELIRGLRSGEYDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSRTSLIQT MGRAARNVHGQVVMFCKKITASMQEAIDITQKRRKFQDEYNRAHGITPHSASRNIEESLK IEDGTEILRKGANLEKMPAAERAKIVKELRKQMLEAAAALEFEKAAALRDEIAKLRKL >gi|257442393|gb|ACYG01000024.1| GENE 142 155540 - 155800 441 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460141|ref|ZP_05625245.1| ## NR: gi|257460141|ref|ZP_05625245.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 86 1 86 86 120 100.0 3e-26 MESIFDEEKKVEGLSNKVAELIRRYTEARDENEKLRTELATVKAQNEALGMQLGTLENDL AYRKMSDEDLSKQIDDILAGDNLGEK >gi|257442393|gb|ACYG01000024.1| GENE 143 155797 - 156033 291 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460142|ref|ZP_05625246.1| ## NR: gi|257460142|ref|ZP_05625246.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 78 1 78 78 135 100.0 1e-30 MKEISVQLTSKSLTKKYAISLDDDFAKVFGRDWRILTRGSDHLDAGELLEAYIQKSYENF MLNKKIDALVKDIDEGVK >gi|257442393|gb|ACYG01000024.1| GENE 144 156033 - 156497 547 154 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1704 NR:ns ## KEGG: CHAB381_1704 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 3 135 1 134 155 68 36.0 1e-10 MKMRKGAAVGGGVSGIIFLAIIIFVIVKIIYPKLSGAKDEVLVKAYAVELEGVFKDIQRD YLNQGNFRELKSMTGSRQFSDSDLARSLAVNQSFTYGVGPKLKNDMIFCATITLRQDSDG YFFTTENINRNRERCEAFHKDTTYMKLNGFRIGK >gi|257442393|gb|ACYG01000024.1| GENE 145 156961 - 157677 464 238 aa, chain - ## HITS:1 COG:CAC3022 KEGG:ns NR:ns ## COG: CAC3022 COG1073 # Protein_GI_number: 15896274 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 6 231 4 228 228 192 38.0 5e-49 MQKSAIEIRGIPAAVWGNRSEKVYIYAHGQDGSKEDAELLASVVCEQGRQVISFDLPGHG QRRREPTSCDPQRAILEFREILSYAKKRWGEVALFAVSLGAWLGLQSFRDEKLSDCLFVS PILDMKYVISNIMRRAGVSEERLKQERMILTPAGQPLFWEYWSFVLNNPITKWKTPSRIL YAENDDMTPLCIVRNFAQKFDCDLSVMKNGEHWFHTPQQLDYLRKWIKSVVRIGDKIL >gi|257442393|gb|ACYG01000024.1| GENE 146 158177 - 158713 846 178 aa, chain - ## HITS:1 COG:Cj1610 KEGG:ns NR:ns ## COG: Cj1610 COG1267 # Protein_GI_number: 15792915 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Campylobacter jejuni # 1 159 1 141 166 127 50.0 9e-30 MDKIFVTFFGAGLLKPAPGTWGSIAGWIVGLAILMLAGEVTLFLCAGLVFFVSLKIVGDY ERRVGAHDNSEIVIDEVVGVWIAMCVAAPAGEIFSLPLRELIAGFESSRISIVAMILALL FFRAFDIRKPSIIGRVDRDVKGGLGVMLDDMLAGFFAGLGVLIVISLGVKLGAAGLIF >gi|257442393|gb|ACYG01000024.1| GENE 147 159453 - 161258 1536 601 aa, chain - ## HITS:1 COG:Cj1609 KEGG:ns NR:ns ## COG: Cj1609 COG2046 # Protein_GI_number: 15792914 # Func_class: P Inorganic ion transport and metabolism # Function: ATP sulfurylase (sulfate adenylyltransferase) # Organism: Campylobacter jejuni # 310 599 101 385 386 258 39.0 3e-68 MASQEKNSRAHPVRIADEIEISSDTGNLHEIKPLESEGILSGTKTLNVARASSDAAQNLE AKQNLKASQSSKARQNSKAKRDLKTMRNLKMSRTSNARKDEALAKGATRNLKAEQARSES KGANNSATQIRKIEISRSDLNVLSLLANGAFGKSCELLRPSKLSICGINFVFSYAGAKKG DILELYLNKDGIAERTKNSLSGDSGAYLLAKELRNLQDEVSAAAQNEQSFAKSGAGFART ASAQSAINATSEGLDHIESLAASYDQTFTCSTDAKSVANLARNFISDSTENFIKNSAANP VSYELVARIDVSDVYAPSASEIAGSVFQNAYAEQTAVQGRITLLKNELAEQIARIKKVAS SLAAPKISAFFTCADPIHRVHERLIRHMIDKADFVVIFLTGTSSADALPYELRKKTLSYL LQNFLVAQRAMMIDLGSLAIFDDKPALQCAIAKNLGINKIIFGQNHANMELFFEGGGVHS VLDEYQKRGEIEILLMPEYVYCEKCKVLVSTKNCPHGAHHHVHYRTQNLKALLRAGILPP AIFMRKEISAMILSELFPARFSDLQKLYDELFPNSGILQSHGESEFYEQLMQLYQTSALK T >gi|257442393|gb|ACYG01000024.1| GENE 148 161236 - 162099 705 287 aa, chain - ## HITS:1 COG:Cj1608_1 KEGG:ns NR:ns ## COG: Cj1608_1 COG0784 # Protein_GI_number: 15792913 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Campylobacter jejuni # 1 121 1 118 118 89 48.0 6e-18 MKILIIESESYLAQSIANKLGALGHECTNAASLAAAASLAEEFEAVLLSTSWSGASFYPL IEKFRRSIIILMVAYVDSETVLNPVKAGATDYIQKPFMIEELIKKIEHYAQFRSLKSQNE AYEALLKEASLSCEILHTRLTQIKFPLLLRGDAAARAAAVFKIALALKSRLKILSAQSLE PLERGAEIFYVPDFDSLSGAQKEKFISKTKSMRVIAGSISAQKGFSDEITLGSSKERSEI LSIEEYVKLTIVAHQDEYFDSDLAAALGISRKSLWEKRKKYGIARKK >gi|257442393|gb|ACYG01000024.1| GENE 149 162096 - 163418 1214 440 aa, chain - ## HITS:1 COG:Cj1607_2 KEGG:ns NR:ns ## COG: Cj1607_2 COG0245 # Protein_GI_number: 15792912 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Campylobacter jejuni # 261 432 1 174 175 176 50.0 6e-44 MKDISLILLAAGDSSRFELPVKKQWLRVGELPLWQYVAQNIARAHPFKKIVIAVNEEDVS YCERLYACSLASARGKSAECGTSEYKFQSEQGGIGCGADDLNDASKPRGAENFKAQVECG ADECGSVNLKFHFAPGGANRQSSLKNALKLVDSELVLVSDVARAQISPGLISSLIRNLGS ADCISPYLGVNDTTYLGENVVKREELRLIQTPQLSRTALLKKALDGNEIFTDDSAAVGSA GGRLEFIKGEAGALKITRASDLAALNLKPCSRDIFYGTGYDVHALEKGAGIMLGGVQIPC EFALIAHSDGDVAIHALIDAICGAAMLGDIGELFPDSDAKLKGADSKELLRKVMRRVRGY GYELVNADITIIAQRPKIGAYKAQMQKVLSEILNCARVNVKATTTEGLGFTGRSEGIAAQ AAVSLKFYDWQKHVAKVQGT >gi|257442393|gb|ACYG01000024.1| GENE 150 163636 - 164943 1326 435 aa, chain + ## HITS:1 COG:slr0118 KEGG:ns NR:ns ## COG: slr0118 COG0422 # Protein_GI_number: 16331858 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Synechocystis # 3 420 12 431 459 548 61.0 1e-155 MTESCVSQIYFAKKGELTPQMREVAQSERMDVRALCDLLAQGRAIIPANVNHKSLKPIGI GRALRCKINANIGSSGTTSDIEGELEKLEVCLKYGADTVMDLSTGGDLDEIRSAIIERSP VPIGTVPIYQMIHELGDIKNLKTSAILSTIEKQARQGVDYFTIHAGFKLEFMPLLSRRKM GIVSRGGSLIASWMMKFHKQNPFYEAFDEICDICAAYDVSLSLGDGLRPGCLYDATDRAQ LSELEILGELALRANEKNVQVMIEGPGHIPFNEIELNMQLERKLCRDAPFYVLGPLPTDI GAGYDHISSAIGGTMAAYCGASMLCYVTPKEHLGLPNAKDVREGIIAHKIAAHAADVALG KVGAIERDHEMSDARYNFDWNRQFELSFDPAHARELHDESLGDEIYKGAEFCSMCGPKFC AYKISRNLTENKEKE >gi|257442393|gb|ACYG01000024.1| GENE 151 164940 - 166034 1478 364 aa, chain + ## HITS:1 COG:Cj1606c KEGG:ns NR:ns ## COG: Cj1606c COG0489 # Protein_GI_number: 15792911 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Campylobacter jejuni # 3 364 2 368 368 511 69.0 1e-145 MSKDEVLNLLKSVIYPGFSKSIVDFGFVKEVEIGDRIFVEIEIPSAKPEIAAELRSAVQK VLGADVEILIKQPKIAEEKSNSRSGKNIAPQIKHFVMISSGKGGVGKSTTTLNLAISTAK LGKRVGILDADIYGPNLPRMLGEDKTQASVVGQKLKPILSHGVEMMSMGVLMEEGASLIW RGSMIMKAIEQLLKDVAWSDLDVLFLDMPPGTGDAQLTLAQSVPVTAGVCVTTPQTVALD DSARGLDMFEKLHIPIAGLIENMSGFICPDNGKEYDIFGRGGAQKLAQRYNTEVIGEIPI EIAIREGGDSGKPVSFYAPDSLSAKRYEDAARKLWEKIEKIDREELADNSAIQPVMDGKS ACSN >gi|257442393|gb|ACYG01000024.1| GENE 152 166859 - 167884 1107 341 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0803 NR:ns ## KEGG: CHAB381_0803 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 3 341 4 362 362 165 28.0 3e-39 MRFLIILVLAFAAFSQESNMQKWAKEITADAQIPQDKFLAFYLNKDEPKKVVFSENVDRI SVNYEGNSFHEIPSPNLMAYWVGEFNFDADVEKMVLGDYGWSTLVIAVDGTDVLGGTSSN QKRPLTYKFSKGKHKIEAWFLNDAHSSELFVDFKDVEPFYRQKDAVAKIPADKDYDLWLG AIYESAQMNNRVKLNLAKSAKPIVLLLSSYRAVEWEISNPQNNEILAVLIYNPISSVRGV SGALYVEDYRYTEAADGLKCECISGNVFHCDGSEIYDMNGRVNGIFGRGLGAFAGKHAVN SLDLPGLVITPKILDESKARLLSVEADRKKCESTQMDDVFR >gi|257442393|gb|ACYG01000024.1| GENE 153 167912 - 168943 750 343 aa, chain + ## HITS:1 COG:no KEGG:Sdel_2112 NR:ns ## KEGG: Sdel_2112 # Name: not_defined # Def: hypothetical protein # Organism: S.deleyianum # Pathway: not_defined # 26 339 172 490 497 195 35.0 2e-48 MKILRVFLLAFYVFLACANANDTQKWASEITAGKQIPADKFLAFYLNKDDPKTVVFSETV ENINLNFAYDNFHKIPSEKFIAYWVGIFDFKQDVQKMILADFSWANLRIAIDGKQIYDSE NARNKAVTHKFSKGRHKIEVWFANNWHTTSLLVDFKDEPNFYKQSEVAAKLKGQNFDIWL AAIYESDANDNKVVVALEKSKKPLVVMLSSYRAVRWEVSNPHNNKILAVLVFNPISSINL KENIYFMDDRGYSGDTEMKCYCVGGGSDFHCEGGYISSKNERIKKEFGQNLSGFGGSYSS AVINLPSILIDENVFAKDAETKKQIEADREKCLKSGKINDIFN >gi|257442393|gb|ACYG01000024.1| GENE 154 168958 - 170154 1356 398 aa, chain + ## HITS:1 COG:Cj1605c KEGG:ns NR:ns ## COG: Cj1605c COG2171 # Protein_GI_number: 15792910 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Campylobacter jejuni # 7 398 4 386 386 415 53.0 1e-116 MSKEFKTIEELNELIQGVRAAKGYRDPIMWAIGRVFKGRAEGHKSLSVNYAYVNFKDGLV SAAVLIHALAECGEVVDFSGSECVLPLTHKALKKAIEALKFLQPDAKEGAHKNLQVLLAV KEAMKSDEHASFCTSFIFEDAAPKSVESVYLKLYALSLNLCEPRTLNLDGAFSVLPNVAW DENARPIELWWLRENEISLKMQGRYPRIISVDKFPRYLSHVVPPQNVRILDDAKVRLGAH IAAGTTVMPGAAYVNFNAGTTGSVMIEGRVSSSVVVGEGSDIGGGASILGVLSGTNGNAV SIGKHCLLGANSVTGIPLGDRCIVDAGIAVLEGTKVFIAQKDREVLAALNAGFAFDREIY KGLELAGLSGLHFRQNSQSGQITASVSKRAIKLNAELH >gi|257442393|gb|ACYG01000024.1| GENE 155 170514 - 170900 404 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460160|ref|ZP_05625264.1| ## NR: gi|257460160|ref|ZP_05625264.1| hypothetical protein CAMGR0001_0572 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0572 [Campylobacter gracilis RM3268] # 1 128 1 128 128 256 100.0 4e-67 MKKFILTLFGVFICSAAFAGDADAERCKALADAVNGHSHPETEDIKLGAATYEGDKFIVS MTLKNIIWDKVDPKIKQNFERVLRADRQKDVCATMKAGGLKHIGVRQFLQSGEKIADLTY TRSDCGLE >gi|257442393|gb|ACYG01000024.1| GENE 156 170919 - 172046 1345 375 aa, chain + ## HITS:1 COG:FN0948 KEGG:ns NR:ns ## COG: FN0948 COG0053 # Protein_GI_number: 19704283 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Fusobacterium nucleatum # 10 372 9 371 372 303 45.0 3e-82 MEVPQAAYSRDKIIIRTGAIGIISNVILAAFKGVVGLISGSIAVVLDAVNNLSDALSSVI TIVGVHLASKQPDRAHPFGHGRIEYLSAIVIAVIILYTGGVSLVESIKKIIHPQAANYNA VSLVIIAVAVAAKFSLGLYTQKTGERVNSDSLVASGVDAKYDALVSLATLVAALISLIFG LSLEAYLGAIISALLIKTAYEILRDTISKLLGSRPSLELTNEIYDVVRGFEGVIGAYDLM FHDYGPDKMVGSVHIEVASDTTAAQIDALTRRIQNAVFAKFNIILDTVGIYAFNRNDPRA AEIYEHIKQMAFSHEFVSQIHGFYLDEPKRSISFDVIVDFAAPDMEATFRAVCKQVRAAY PNYTLIITRDSDYSG >gi|257442393|gb|ACYG01000024.1| GENE 157 172268 - 173860 1786 530 aa, chain + ## HITS:1 COG:Cj0426 KEGG:ns NR:ns ## COG: Cj0426 COG0488 # Protein_GI_number: 15791793 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Campylobacter jejuni # 1 529 1 524 525 704 67.0 0 MVEIKDLTMRFGKQLLFENVNLSLDKGRRYGLIGANGAGKSTLLKILSGQIEASSGEILI QSGLKIGVLGQDQFAFESFSVKDAVLYGNKRLYDAVREKTQLYEAGEFNDEINERLGELE MICAEEDPAYEYETRIEKILSSLGLNDFDKKMSEIETSDKFKVLLAQVLFPRPDVLFLDE PTNNLDIDAISWLEFELNRHTGTLVVISHDRHFLNRVCTDILDVDFRRVREFSGNYDDWF IASNLIAKQAQFEREKKLKEKAELEKFIARFSANASKAKQATSRQKQLDKLDLSELATSS RREPSILFKPAREIGNEILELSGVDMSFGDIQILKNFNLKLAHGDKIGIIGRNGVGKSTL CKIIMGELAPQRGKVHMGATIEPGYFAQDTNNKISGELKLYEYLQSPQNRDLDEIRKCLG RMLFSGAEQEKSVGSLSGGEKHRVMLSKLMLQRPNLLVLDEPNNHLDLEAIIALGEALYN FAGCAICVSHDRELIDAFANRILHLKGDGEIVDFRGTYEEYRESLGASDD >gi|257442393|gb|ACYG01000024.1| GENE 158 173853 - 174056 362 67 aa, chain + ## HITS:1 COG:ssr0102 KEGG:ns NR:ns ## COG: ssr0102 COG2104 # Protein_GI_number: 16331468 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Synechocystis # 2 67 6 71 71 58 37.0 2e-09 MIEICVNGEPLQLAQDMSVSEFLRSRGHDLRFVALERDGEILKKEAWERTQISSGKKYEI VEFVGGG >gi|257442393|gb|ACYG01000024.1| GENE 159 174138 - 174329 101 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460165|ref|ZP_05625269.1| ## NR: gi|257460165|ref|ZP_05625269.1| hypothetical protein CAMGR0001_0577 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0577 [Campylobacter gracilis RM3268] # 1 63 1 63 63 116 100.0 4e-25 MATQQLGLKICMRVVKILSGTAARRYSGVWVFKFMRKLRWPGACGELLNFVSELSRGGRT QEF >gi|257442393|gb|ACYG01000024.1| GENE 160 175029 - 175823 1092 264 aa, chain + ## HITS:1 COG:Cj1046c KEGG:ns NR:ns ## COG: Cj1046c COG0476 # Protein_GI_number: 15792373 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Campylobacter jejuni # 1 263 2 267 267 235 46.0 5e-62 MQIKLNGKAYETGASDLEGLKREVKFSGEIAVINGYASTQNCELKAGDELFLLARGAELS SQELRELMLARNAPAVNEALQGSRVAICGLGGLGSNVAILLARAGVGELFLIDFDVVEPT NLNRQQYEIGDLYKPKTAALREKIARINPFVRVRTLNERLTAQNVAEILKNERIICECFD DAAAKAMIFGAFGGTDRFLICASGMAGSGDANEIRTTRLGKNVFVCGDRKSAAAQGVGLL APRVAICAAHQANIALRLILGEEG >gi|257442393|gb|ACYG01000024.1| GENE 161 176353 - 177114 952 253 aa, chain + ## HITS:1 COG:Cj1045c KEGG:ns NR:ns ## COG: Cj1045c COG2022 # Protein_GI_number: 15792372 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Campylobacter jejuni # 2 253 7 257 258 320 67.0 1e-87 MNDKLILGGKEFSSRLIMGSGKFDHAMIDACVRHAGCEIVTLALRRVNESKSRNILNFIP RGVTLLPNTSGARNAEEALRIARLARELGCGDFVKIEIIGDSKYLLPDNAETIKACEALA REGFVPLAYMHADLCVARDLVSAGAAAVMPLAAPIGSNRGLMMRGMIEILLDEIDVPIIV DAGLGAPSEACEAMQMGCAAVMVNTAIATSGDLALMARAFALGVQAGRDAYLAGLGAVCK TACASSPLTGFLR >gi|257442393|gb|ACYG01000024.1| GENE 162 177414 - 178031 618 205 aa, chain - ## HITS:1 COG:HP0235 KEGG:ns NR:ns ## COG: HP0235 COG0790 # Protein_GI_number: 15644863 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori 26695 # 32 183 197 344 355 92 35.0 3e-19 MKKIILGLALLGSLAFGITFSKEQVKQFEQNCEAGDFEACSYAGALYKNPTLFGGNASDR DYKKALYYFKKACDGNDYVACSDLGAMYHGGKGVKKDYKKAVELFDKACDGGYADGCNNL GYMYANGKGIKMDMTRAMGYARRACDAGSWMACGNFASVLEAGGDRTRATQYYQKACEMG KKHPGLFGYDKDSLREYCDKYDMLK >gi|257442393|gb|ACYG01000024.1| GENE 163 178251 - 179381 1201 376 aa, chain + ## HITS:1 COG:FN1753 KEGG:ns NR:ns ## COG: FN1753 COG1060 # Protein_GI_number: 19705074 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Fusobacterium nucleatum # 10 376 3 374 376 444 56.0 1e-124 MMKTGYLAGMEDIGSEMMERTLALRESFCEEASEADVQRAIGAKNRTLRDFAALLSVRAG EHLEQIARTAAREKAAHFGSNIAVFTPIYISNYCDNLCVYCGFNCKNKIARARLDEAQLK AEFEAIAASGLEEILILTGESEKNSPVRYIGRACELARQYFKVIGVEIYPLNSADYAYLH ACGVDFVTVFQETYDPARYAQLHLAGNKRVFAYRFAAQERAIRGGMRGVGFAALLGLGDF RRDAFATGVHAWLLQRKYPRAEISFSVPRLRPIINNDKINKDVGERELLQVMCAYRLLLP SAQITISTRERAGFRDNAIRIAASKISAGVSVGIGGHSEQRGDEQFEISDARSVSEVCEA IRGGGLQPLMSEYIYV >gi|257442393|gb|ACYG01000024.1| GENE 164 179374 - 180228 388 284 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460175|ref|ZP_05625279.1| ## NR: gi|257460175|ref|ZP_05625279.1| hypothetical protein CAMGR0001_0587 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0587 [Campylobacter gracilis RM3268] # 1 284 1 284 284 498 100.0 1e-139 MCEARNFTACVDGICDAVDKICGVGLEGGFSVAQRRSKICSVKYGAEFCSAAHGDKIYGA MADKKGLGAALASVRNSGFKNTRVNLRPRNTYADLKFKGDANSKPAGNANFKFKNGASFG FLCSGNARSLKSRSWANALSFSAAAEISALVKADEILASVWPGKILSFDTSAKDPASDEA AQDLIPNDAIGILCAAETMKFLALDERVKFLRCGATKISNPKDAAEISASTKAAGMLSFS AAAWVLASILANKILNPNAAGKILSLNVAPCTGADFELKGVGGC >gi|257442393|gb|ACYG01000024.1| GENE 165 180222 - 181589 758 455 aa, chain + ## HITS:1 COG:FN1752 KEGG:ns NR:ns ## COG: FN1752 COG0352 # Protein_GI_number: 19705073 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Fusobacterium nucleatum # 349 441 112 204 206 66 39.0 1e-10 MLDLELASRITIITNRVLCGGEAALLARIADFAAAGVGEIVVREKDLDEAAYAALFENIL RACEFYDRADRLSFDADRACPHEISPNEIRAAKFDAAEAHEEGFGTDAARSDGIFAEEVC ARTIPHKIYDDRACVVQTLVGGLNASAVCADKISLYERDEDEVLQKKLDLGDGKSELCAD TARKHGAATDEIRSKNSACVLDEILSENFTSAANCENDSAPGEISLRGVVCETKPAVEIA RSAANAESMQGAQSTENVNDVHSAKNAGSSQSTQYTESSESIEGVENLQSVKEAENSQSV EGARSAESARRPPAIFVHNFADFALRAGERNLWLPLGVLRSFSAARGAEFLRANFKKLVA SCHSEAEAREALELGASAICLSHIFATDCKAGLMPKGLNLIRAVRGFYGGEIYALGGITP RNFASVLRAGADRIAVMSSAMAARDASDFIRKFKK >gi|257442393|gb|ACYG01000024.1| GENE 166 181586 - 181807 75 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460177|ref|ZP_05625281.1| ## NR: gi|257460177|ref|ZP_05625281.1| hypothetical protein CAMGR0001_0589 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0589 [Campylobacter gracilis RM3268] # 7 73 1 67 67 113 98.0 5e-24 MNRSENVVRFFCRALAAVISRMRRDAKHILNKIKNARNGRDLLQFKPEVIKYERFKLKDI FWIKCGLRNLKSF >gi|257442393|gb|ACYG01000024.1| GENE 167 181768 - 182784 220 338 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460178|ref|ZP_05625282.1| ## NR: gi|257460178|ref|ZP_05625282.1| hypothetical protein CAMGR0001_0590 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0590 [Campylobacter gracilis RM3268] # 1 338 1 338 338 635 100.0 1e-180 MDKVRFEESKKLLNEGRQNLKQKLRKGASAEIFDDADLSDATDRSSLNLNDTNLSSKSFK NANFNQTDLKLQANYLCAANFRDRNLNGTNLNSKDEVKFQNLNSGCISSRGAKTRDYDKE PLVIKDYMPIVNIIAIVALLCFAMFINLVSNIPYDRKVANILLTAPLVARALKGFSQHYG RKFIFLNSSIKCIKSGEQLVMKFDDILYFKKTFALVYESETRKYTETERIIGKICLAIYV IAYIYGAIFDDSMIVFIMLFCCMGAIIFLFIPQMIFHLFKGGLFSCRFVDALIIDALYNK FFIFIPTNKEYNELKKYMKLKFNKDLDAPNYLLRVKNF >gi|257442393|gb|ACYG01000024.1| GENE 168 182813 - 183670 793 285 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1592 NR:ns ## KEGG: CHAB381_1592 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 285 1 242 242 188 37.0 2e-46 MKFFAILILCASALFGETISAKYEISFGVFGAVGSANTRLVREDDRYEIVMDAVAQGVAG SLSGQRRESFRSKGRVVAGLLMPDLYVHEVSRKKGKTTKNERKTYAFDYARKTIKFQKFK GTGGELQLVSDEILPYFATNDLLSLFFNFSKIPHSGDKFFVRAAGAKSADGRIDIERPRG SAAANIASELGVAPPSDADTNSGAAASASSSGADTKTGATDANFKGRGAGTDKQATAIYV VFINQPIFSSSRGELHLSLNERGYADRAVLKDVLLFGDIRARLVE >gi|257442393|gb|ACYG01000024.1| GENE 169 183891 - 184151 123 86 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1178 NR:ns ## KEGG: CCV52592_1178 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 6 59 2 57 80 83 73.0 2e-15 MSKGASDFKKIPYVGEATEADLLALGYEDIASLKGADPDETKERTKALGRGRCIIYVYRG QLLRKHSAPRQSQAKVVALEGLNLRI >gi|257442393|gb|ACYG01000024.1| GENE 170 184710 - 185396 516 228 aa, chain - ## HITS:1 COG:Cj0381c KEGG:ns NR:ns ## COG: Cj0381c COG0284 # Protein_GI_number: 15791748 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Campylobacter jejuni # 1 228 1 226 279 305 63.0 4e-83 MKLCIALDMSSKQECLQLAERLADFSDKIWLKIGLRTYLRDGAGFIEELKKLGNFKIFLD LKLYDIPNTMADAAEEIAKLSIDMINVHASSGKRAMATVMQRLDKLGSRPLVLAVSALTS FDQAEFSAVYEQNLNDAVRKFSVMSYEAGLDGMVCSAYESRLIKDATSAKFITLCPGVRP FGESAADQKRVADLGVAREARADFIVVGRPIYQSADPHEICERILGQI >gi|257442393|gb|ACYG01000024.1| GENE 171 185393 - 186421 855 342 aa, chain - ## HITS:1 COG:Cj0382c KEGG:ns NR:ns ## COG: Cj0382c COG0781 # Protein_GI_number: 15791749 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Campylobacter jejuni # 1 125 1 127 132 128 55.0 1e-29 MATRHQARLAAISLLYSRDMNGGGEDFADEYLEEKRIRNEQRNWTLALLRGASENLAAVD ALIDENLKEFKLAEISALERAILRLGAYELRFTDTDAGIVINEAINSAKELGISPRFING VLDALKDSPVNIAADKISKPTATASENLETTTEAVKNFKPATEKNSAVSDSNDTAKNFIP AGADGKTKNFTKTKRDGTPKNSTARRSRPSKKPANLKTRSAPAKKSEAAASKKFKTERNF KTGDKFKTEKTGKNFKTGERGKNFKAGERGKDAAPKKESADRNFRVGKSAAPKKGTAGKN TAPKSSAGRKISTAPKKSAGGRGALSKRPAGNKGTVRGKDKR >gi|257442393|gb|ACYG01000024.1| GENE 172 186423 - 186893 761 156 aa, chain - ## HITS:1 COG:Cj0383c KEGG:ns NR:ns ## COG: Cj0383c COG0054 # Protein_GI_number: 15791750 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Campylobacter jejuni # 1 154 1 154 154 226 74.0 1e-59 MKIIEGLLALKGSEKILIINARFNHIITDRLVEGAHDAFLRHGGKEENLSLMLVPGAFEI PLALEKALSSKLYDAVVCLGAVIRGSTPHFDYVSAEVSKGIANTMLKYGAPVTFGVLTTD NIEQAIERAGSKAGNKGFEAMSGAIELLSLFRNIKA >gi|257442393|gb|ACYG01000024.1| GENE 173 187027 - 187218 76 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTPRITAPIVPIPVHKLSVNMKNMRSRLISKSSFSAIAVSRKTIKSTPSPVYRTYASTA LCI >gi|257442393|gb|ACYG01000024.1| GENE 174 187510 - 188133 341 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 4 189 5 201 201 135 38 1e-30 MLKLRELPFDAAHNAVVSKQTCDYHHGKHHATYVANLNKLTESGEFAGKGLYEIVTASSG GLFNNAAQVYNHDFYWDCIAKPSEPSVELKSALAENFADFKSEFLAAATAHFGSGWVWLA YDPKSGKLCIKATQNAATPVTEGLVPLLVVDVWEHAYYIDEHNARPKYLEKFYAGINWEF VSSAYEWAKKEGLGSVKFYIDELHGRD >gi|257442393|gb|ACYG01000024.1| GENE 175 188381 - 188962 728 193 aa, chain - ## HITS:1 COG:VC1939 KEGG:ns NR:ns ## COG: VC1939 COG1280 # Protein_GI_number: 15641941 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Vibrio cholerae # 3 190 8 203 206 117 37.0 1e-26 MLLFFLTIFPISLMPGINMTYALNLGIARGYLRALPALLAQVLGVAAVALACIFGVAGIL LAHPAALSAIKILGGAYIFYLGVATFLARGNFKPQKQKRSENIFFQGLVVAVSNPKAWIF FTALFPPFLDADNLFGARTFALVAILCASESICLSIYALGGAVLKNLLKTHLKYLEIFCS VLMCAIGLWMILG >gi|257442393|gb|ACYG01000024.1| GENE 176 189489 - 190856 1356 455 aa, chain - ## HITS:1 COG:Cj0601c KEGG:ns NR:ns ## COG: Cj0601c COG0733 # Protein_GI_number: 15791961 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Campylobacter jejuni # 1 439 1 431 447 496 63.0 1e-140 MPRQTWSSKLTYILTVAGATIGFGCTWRFPYLVGENGGGAYVLVFCIAMIVLGIPMILVE NVIGRRALRNCVDAFTAPKKDGSRIKPAWKIVGIMGVIGAFGILAYYMVLGGWVLTYIVN IVSGNFDLSARITDPTFTQKFYADHIENSPLGVGGYTIVFIAINWYILKNGIIEGIEKFV KFLMPALFLCFIAVILTNLTLEGAKEGVKFYLGVDFAKITPKLLIDVLGQVFFALSLGFG VMITLSSFLNKDEKLMQTATITAVVNTLIAVLAGFMIFPSLFSAGLEPSSGSSLVFKSLP IAFSHMPFGNAVAVVFLSILLIAALTTSITIYQVIINFVEERFSFSTLKAVNLTLGGVFV LGNLPCILSSSVLADFKILGRSVFDAFDFVSANVFFVLTALLCCIYVGWVLKKDAIYEVT NEGDLGARLAGVWFLYVKFILPLIIAVIFGYGIFG >gi|257442393|gb|ACYG01000024.1| GENE 177 190866 - 192419 1277 517 aa, chain - ## HITS:1 COG:Cj1405 KEGG:ns NR:ns ## COG: Cj1405 COG0799 # Protein_GI_number: 15792723 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Campylobacter jejuni # 411 514 2 105 108 127 58.0 6e-29 MPSFLNPFKKSFSAPPQLRLRWCRALWSDASHVEVSDYEISQNVPVPTIQSVKFLLEKYG IHDKITAETAATASKTPTAVTDRALPDGVNIAGEICADAHISGSAGEILPSKADRTLPYG IAKISSDNACTAINTDRVSISANAKNKILQGSVADEILICNGSKTKGISQSTASGISGGC KSNAGGANDVSKILSADKISSVVASKVSDIAMREISNSVGGEISSISKIPSTVRNEILSA DASEITNASVISSPVASEIPSDNANCMADIGDANCVGSANSAGDTGGVNCMNGANDMHDA SDVSSADEASKANSASGTDTISKLYIVVGADNLAELHKWRDFSELQKLAEFVVLTRPGYE IPRQWAALRRIEIAVDTSSSGFRRDFKGEIPPKIAAEVIKFYKRKDMQDPKQRAERIAEI LNEKKAEDIQIIDMSEREYIAKLVVIATTLTSRHAASLIEELKSVLKPLGEEFLAIESGD EWSVVDLGDIIVHLISEAYRAKYNIEDFLDKLKKEQF >gi|257442393|gb|ACYG01000024.1| GENE 178 192521 - 192844 88 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460192|ref|ZP_05625296.1| ## NR: gi|257460192|ref|ZP_05625296.1| putative pentapeptide repeat protein [Campylobacter gracilis RM3268] putative pentapeptide repeat protein [Campylobacter gracilis RM3268] # 1 107 26 132 132 168 100.0 2e-40 MKFQTLNLELKIKFNAAKFGGVKFRDGALLKFAAAKGLRRGPSLCAAAPFKFTALQNAGF FARKFDETEFCDVKFHKVRLRHARFCGAEFAAKGEKFCGMKRRGAGA >gi|257442393|gb|ACYG01000024.1| GENE 179 193317 - 194567 1678 416 aa, chain - ## HITS:1 COG:Cj0389 KEGG:ns NR:ns ## COG: Cj0389 COG0172 # Protein_GI_number: 15791756 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Campylobacter jejuni # 1 415 1 410 411 521 64.0 1e-147 MINLKLIETNFDEFNKKLIAKKVPPQTLQTLLDAYNELKSKKTELENLQAVQNAKSKELG LAAREGKDVGALKSQLEENKQKIQSLSELVNEREQSLEAIAACVPNIIDDDVPIGANENE NVCIKKVLDPRTFDFAPKQHFDLGEALGWLDFERGVKLSGSRFTAIRGLGAKLNMALINY MIEFNNSRGFELVNMPFLVRDQILYGTGQLPKFKDDLYHVDDEEQNLYLIPTSEVTATNL FSDEILRSEELPIKLTSYSHCFRKEAGSAGRDTRGMIRQHQFEKVELVAITRPEDSAKML EEMISCASDLLASLGLPHRHMLLCSGDLGFSAAKTVDLEVWLPGQNQYREISSISNCRDF QARRAKIRFKDGKKNSLVHTLNGSSLAVGRTLIAVMENYQRKDGSIEIPHVLEKYM >gi|257442393|gb|ACYG01000024.1| GENE 180 194708 - 195457 990 249 aa, chain + ## HITS:1 COG:BMEI0641 KEGG:ns NR:ns ## COG: BMEI0641 COG5266 # Protein_GI_number: 17986924 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Brucella melitensis # 13 248 15 252 252 177 41.0 1e-44 MKAKFAFLGIFAASLAFAHFGVLTTDKNVVEDQKDATLKLNLEFSHPFLQESMNLQKPAE FGVFIDGEKKSLLGSLKEQKKGENSYFAAEFKVDKPSLLAFYFDPKPYAEPAERKMIRHI TKTYVDAYGAGEGWDKPLGLEAEIVPLVRPYALYAGEIFSGVFLLHGKPVPGADVEIELY NDKGYKAPSEAHVTQVVKTNGAGEFSFVMPVAGWWGFAALSEEEAAKGSEQPVNELGAVL WIKADELKK >gi|257442393|gb|ACYG01000024.1| GENE 181 195980 - 196249 161 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460196|ref|ZP_05625300.1| ## NR: gi|257460196|ref|ZP_05625300.1| hypothetical protein CAMGR0001_0608 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0608 [Campylobacter gracilis RM3268] # 1 89 171 259 259 109 100.0 9e-23 MQAVKFIKFTGSESSSEAASSLALTAAADRTQAASFTAANFAAIKTVKTRPVAIKAIIAK VVNALNLASSRVFARLKNGSDLKEASRAH >gi|257442393|gb|ACYG01000024.1| GENE 182 196239 - 196838 595 199 aa, chain + ## HITS:1 COG:HI1621 KEGG:ns NR:ns ## COG: HI1621 COG0310 # Protein_GI_number: 16273510 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Haemophilus influenzae # 1 194 1 195 206 86 34.0 3e-17 MHISEGVLSAPVLLAGWAVTAPAVAAILWRVRQSEIPRIACFSALFFVASFVHLPVGVSS MHLMLSGLVGAFLGSRAILAIFVALFLQGVFFGFGGLSVLGVNTAVIGFPAVLGGLLAAA AKAQELKVRTQKIYLFLAGFVPIVCSMLFLDLVLFISGREFFAIATLISLEGAILAVLEG IITLFALSFIAKFYGGQRR >gi|257442393|gb|ACYG01000024.1| GENE 183 196835 - 197398 519 187 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0542 NR:ns ## KEGG: CHAB381_0542 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 130 1 124 148 86 34.0 6e-16 MRALLLLTVLTSFAFSHALHLFATQEGDRVAIYSYFYKNSPCMECEVLISTDGREILRTR TDKEGLASIRIPAKNFTIQIYGGAGHGAQMEFSAENFTPQDSGDPENSTPQNSDVSENPV PQNLNATKNFASKDSAPENIAPKENSKNDIQSMAFQSQSAEVPKIALCLALIFGFFGLMW LAKRARK >gi|257442393|gb|ACYG01000024.1| GENE 184 197395 - 198042 594 215 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0555 NR:ns ## KEGG: CCV52592_0555 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: ABC transporters [PATH:ccv02010] # 1 215 1 215 215 109 36.0 7e-23 MSPAVSLLAFFIFSFGVGLSGQLYAAFFAPPLLLFALKISIARAVCTRLAVLNIFAILSA LSPAIVGNYELTGVIFLRANLIMAFAILLFYGKDEYFFARGFYGLGLGEKLSSLVYCCGR FVNFLRSDLTRLQALLRMRGFVGTSGIFTYKIYANLVGILAISALEQARNLSLVMSARGF CGRLFYERREALSVSEASFLAFVLACVSIKIGAIL >gi|257442393|gb|ACYG01000024.1| GENE 185 198039 - 198815 303 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 13 249 11 205 205 121 34 3e-26 MSCSLKALGLSAKNGEREIFRGVNLSVGHKEKVAILGANGQGKTSLLQILGGLRQWGEGE IELFGEKLECVEDFAKFRHEIGFLFQNSDDQFLCASVFEDVAFSLRAQNERLKRAQNAEK RRGIFSKFFGRNAQILRQGSENDHLKKLEILSEEQIERKALETLRCLGIEHLRERVPFHL SGGEKKLVALAGALVCEPRILLLDEPTTALDEAMQERVAGILAGLDVSEIIVSHDKNFID KIADKIYYLKSDGLYESP >gi|257442393|gb|ACYG01000024.1| GENE 186 199206 - 199904 462 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460201|ref|ZP_05625305.1| ## NR: gi|257460201|ref|ZP_05625305.1| hypothetical protein CAMGR0001_0615 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0615 [Campylobacter gracilis RM3268] # 1 232 1 232 232 434 100.0 1e-120 MYSSLDAAIANIKKFSRCKNFHYPNIPQVGDIADFKPEPKFNLTKDENYQEALAFINDNF TGKSKYYDFIHLTKLSNLSSIIKMGGIFCMNYLKNNGIGPNLLTNELSNELDNRRNLGDY VHLSVIGDNCMLNTFIDRHKNENLAIILISPIVLFYHAFIMSDQNATANAAHIGRYSTIK NYLNFVSLYSIQEFPSYDVAQNSLYKISQAEVMIYEKIPLKFVSEIIPLVRN >gi|257442393|gb|ACYG01000024.1| GENE 187 199908 - 200591 467 227 aa, chain + ## HITS:1 COG:no KEGG:CAP2UW1_1710 NR:ns ## KEGG: CAP2UW1_1710 # Name: not_defined # Def: hypothetical protein # Organism: A.phosphatis # Pathway: not_defined # 3 214 2 209 227 155 42.0 2e-36 MQAIRPIFYAIDKSPFVKSVDIKFEFFSGFALSQKIKSIDSLLSNARAELKSEKILEISK ASPNPLGKALSAFNLKLRLKDEEQNLIEASVERFFQGSKFFERGGPFEEIIFSAKVHPKK YPPLKNSGNFCGFELFGERFSTEPKTYFYDFLYLSALKQNPNLADEVLRYDYFSDIEFNP KKSFSAQSRAAALFVGLSRNGIFKEIFADKDTFFDFYCKNFKRESLF >gi|257442393|gb|ACYG01000024.1| GENE 188 200602 - 201015 375 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460203|ref|ZP_05625307.1| ## NR: gi|257460203|ref|ZP_05625307.1| hypothetical protein CAMGR0001_0617 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0617 [Campylobacter gracilis RM3268] # 1 137 19 155 155 232 100.0 6e-60 MEKSTAIFGSITALILLFIVLTLLVLKSKSANSKEFIPEKKATIKEKVSFNGEDIERLKL IFSGITAISLLTIAIILFGVCVHYYKGVGFYLETDLYVPSTISIESIRAPIGIDYINRIG YSDTIDVNADVTIKNLR >gi|257442393|gb|ACYG01000024.1| GENE 189 201472 - 202626 801 384 aa, chain - ## HITS:1 COG:Cj0384c KEGG:ns NR:ns ## COG: Cj0384c COG2877 # Protein_GI_number: 15791751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Campylobacter jejuni # 1 141 4 144 271 218 74.0 1e-56 MILIAGPCVIESRELIMQVAESLRKFNEISGVEFYFKSSFDKANRTSISSFRGPGLQRGC EILAEVKEKFGYKILTDIHESYQAEPAARVADVLQIPAFLCRQTDLLVAAASTQAVVNIK KGQFLSPQAMKHSVEKVLQTRSARAYTPQSGAASGNTNAAQNSACSDDAEICGTQNGARG GANDGSLVLGAQNSCGTGQDAQNFIHTCSAKSGAESTAKNTATPCAARSNNEAQNTPQPN LSHTCSAQDGSISAAQNAPQPSGEGMHDLARRHGVWLTERGSTFGYGNLIVDMRSLPIMR EFAPVIFDATHSVQMPSIGATSGGDSRFVPYLARAAAAVGVDGFFYETHPDPAHALSDGP NMLNLQQLERVVAQTLAIQKALGF >gi|257442393|gb|ACYG01000024.1| GENE 190 202678 - 203265 748 195 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1591 NR:ns ## KEGG: CHAB381_1591 # Name: not_defined # Def: conjugal transfer protein # Organism: C.hominis_BAA-381 # Pathway: Bacterial secretion system [PATH:cha03070] # 25 194 2 171 173 231 66.0 2e-59 MKKLVFALFLALQAPAYSPNEIVNAITAVAQNEGVKPEILYTIVKIESDFEPYTISFLTN KANADYFAGLRNQNIRIRTSNYSLNSSKWVVTIIPANEIYAVQIAKYLYEDGFSIDVGLG QLNAVNFSQNEIDYIFNPMYNLTKCAKILRKCWNAKNKNIKDTIECYNYGMRKRYSNPYY KRFYEHYEKFFGKPY Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:23:08 2011 Seq name: gi|257442272|gb|ACYG01000025.1| Campylobacter gracilis RM3268 contig00002, whole genome shotgun sequence Length of sequence - 96693 bp Number of predicted genes - 88, with homology - 88 Number of transcription units - 45, operones - 22 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 274 - 300 -1.0 1 1 Tu 1 . - CDS 460 - 1479 1398 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 1620 - 1679 5.7 + Prom 1475 - 1534 5.3 2 2 Tu 1 . + CDS 1609 - 1794 127 ## gi|257460211|ref|ZP_05625314.1| hypothetical protein CAMGR0001_0007 + Term 1870 - 1897 -0.8 3 3 Tu 1 . - CDS 2153 - 2680 491 ## Sked_13760 hypothetical protein - Prom 2706 - 2765 5.1 4 4 Tu 1 . - CDS 2813 - 3412 552 ## gi|257460215|ref|ZP_05625318.1| hypothetical protein CAMGR0001_0011 - Prom 3443 - 3502 3.0 5 5 Tu 1 . - CDS 3536 - 4426 1004 ## Coch_1814 hypothetical protein - Prom 4447 - 4506 5.3 - Term 4576 - 4618 -0.7 6 6 Tu 1 . - CDS 4668 - 5678 990 ## COG0139 Phosphoribosyl-AMP cyclohydrolase - Prom 5732 - 5791 5.2 - Term 6059 - 6096 -0.4 7 7 Op 1 1/0.286 - CDS 6343 - 7422 1473 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 8 7 Op 2 . - CDS 7431 - 8357 1108 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 8384 - 8443 8.7 - Term 8447 - 8503 3.9 9 8 Op 1 1/0.286 - CDS 8511 - 9635 1044 ## COG2829 Outer membrane phospholipase A 10 8 Op 2 . - CDS 9625 - 10191 412 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 11 8 Op 3 . - CDS 10253 - 11029 887 ## gi|257460226|ref|ZP_05625329.1| hypothetical protein CAMGR0001_0022 - Prom 11059 - 11118 9.7 - Term 11216 - 11262 3.2 12 9 Tu 1 . - CDS 11284 - 11643 320 ## CCV52592_0132 hypothetical protein - Prom 11674 - 11733 3.8 13 10 Tu 1 . - CDS 11745 - 12773 1036 ## COG0628 Predicted permease - Prom 12803 - 12862 5.5 + Prom 12801 - 12860 5.8 14 11 Op 1 . + CDS 12956 - 14044 1195 ## COG0500 SAM-dependent methyltransferases 15 11 Op 2 . + CDS 14044 - 14523 560 ## gi|257460230|ref|ZP_05625333.1| hypothetical protein CAMGR0001_0026 + Term 14625 - 14677 0.3 16 12 Tu 1 . - CDS 15098 - 15379 362 ## gi|257460232|ref|ZP_05625335.1| putative polyphosphate kinase 2 - Term 15745 - 15805 4.3 17 13 Op 1 . - CDS 15878 - 16492 801 ## CHAB381_0364 hypothetical protein 18 13 Op 2 . - CDS 16565 - 16966 410 ## gi|257460235|ref|ZP_05625338.1| hypothetical protein CAMGR0001_0031 - Prom 17180 - 17239 2.6 19 14 Tu 1 . - CDS 17254 - 18816 1119 ## LGAS_0485 acetyltransferase - Prom 18850 - 18909 2.1 - Term 18849 - 18879 -0.7 20 15 Op 1 3/0.143 - CDS 18946 - 20061 1366 ## COG0082 Chorismate synthase 21 15 Op 2 3/0.143 - CDS 20058 - 20969 926 ## COG0571 dsRNA-specific ribonuclease - Prom 21129 - 21188 2.9 - Term 21253 - 21298 5.5 22 16 Op 1 . - CDS 21369 - 21791 361 ## COG0328 Ribonuclease HI 23 16 Op 2 . - CDS 21769 - 22794 1158 ## CHAB381_1611 TPR repeat-containing protein - Prom 22817 - 22876 5.8 + Prom 22612 - 22671 5.3 24 17 Op 1 2/0.143 + CDS 22855 - 24981 2033 ## COG0358 DNA primase (bacterial type) 25 17 Op 2 . + CDS 24991 - 25974 1256 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 26 18 Tu 1 . + CDS 26325 - 26735 312 ## gi|257460246|ref|ZP_05625349.1| hypothetical protein CAMGR0001_0042 27 19 Op 1 . - CDS 26835 - 28079 1152 ## CHAB381_1485 periplasmic protein 28 19 Op 2 1/0.286 - CDS 28162 - 29745 2116 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) - Prom 29781 - 29840 5.6 - Term 29833 - 29868 5.1 29 20 Op 1 . - CDS 29878 - 31716 1993 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase 30 20 Op 2 6/0.000 - CDS 31759 - 33120 1429 ## COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component - Prom 33154 - 33213 2.5 31 20 Op 3 . - CDS 33226 - 33795 413 ## COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component - Prom 33855 - 33914 9.1 + Prom 33813 - 33872 4.4 32 21 Tu 1 . + CDS 33892 - 34521 542 ## COG1495 Disulfide bond formation protein DsbB + Term 34646 - 34687 -0.1 - Term 34480 - 34514 6.0 33 22 Op 1 . - CDS 34523 - 34906 401 ## COG2165 Type II secretory pathway, pseudopilin PulG 34 22 Op 2 . - CDS 34970 - 35743 656 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase - Prom 35835 - 35894 8.8 + Prom 35799 - 35858 7.1 35 23 Tu 1 . + CDS 35892 - 36578 880 ## CFF8240_0460 SapC + Term 36805 - 36842 6.6 - Term 37447 - 37487 0.6 36 24 Op 1 . - CDS 37574 - 38806 1352 ## COG2195 Di- and tripeptidases 37 24 Op 2 . - CDS 38819 - 40165 1611 ## COG3069 C4-dicarboxylate transporter 38 24 Op 3 . - CDS 40177 - 40875 1048 ## COG3340 Peptidase E 39 24 Op 4 2/0.143 - CDS 40886 - 42202 1611 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 40 24 Op 5 . - CDS 42213 - 43451 1311 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 43481 - 43540 7.5 + Prom 43610 - 43669 5.5 41 25 Tu 1 . + CDS 43690 - 44691 1198 ## CCV52592_0963 hypothetical protein - Term 45204 - 45255 13.1 42 26 Op 1 27/0.000 - CDS 45257 - 46594 1528 ## COG0439 Biotin carboxylase 43 26 Op 2 . - CDS 46591 - 47049 578 ## COG0511 Biotin carboxyl carrier protein - Prom 47069 - 47128 6.7 - Term 47397 - 47440 -0.1 44 27 Tu 1 . - CDS 47470 - 48519 1062 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 48581 - 48640 9.1 + Prom 48535 - 48594 11.5 45 28 Op 1 . + CDS 48643 - 49206 736 ## COG0717 Deoxycytidine deaminase 46 28 Op 2 . + CDS 49210 - 51441 2196 ## COG0550 Topoisomerase IA 47 28 Op 3 . + CDS 51438 - 52646 886 ## CHAB381_1550 phosphodiesterase 48 28 Op 4 . + CDS 52619 - 53782 1255 ## COG0475 Kef-type K+ transport systems, membrane components + Term 53807 - 53869 9.3 49 29 Op 1 . - CDS 53901 - 54350 345 ## gi|257460277|ref|ZP_05625380.1| hypothetical protein CAMGR0001_0073 50 29 Op 2 . - CDS 54380 - 54829 287 ## gi|257460278|ref|ZP_05625381.1| hypothetical protein CAMGR0001_0074 51 30 Op 1 . - CDS 55231 - 56085 626 ## PROTEIN SUPPORTED gi|157165357|ref|YP_001467327.1| ribosomal protein S1 52 30 Op 2 2/0.143 - CDS 56107 - 58221 2839 ## COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 53 30 Op 3 2/0.143 - CDS 58205 - 58924 797 ## COG1926 Predicted phosphoribosyltransferases 54 30 Op 4 3/0.143 - CDS 58924 - 61182 2239 ## COG1452 Organic solvent tolerance protein OstA 55 30 Op 5 3/0.143 - CDS 61169 - 61606 348 ## COG1714 Predicted membrane protein/domain 56 30 Op 6 . - CDS 61603 - 62859 1367 ## COG0151 Phosphoribosylamine-glycine ligase - Prom 62919 - 62978 2.6 - Term 62966 - 62990 -1.0 57 31 Tu 1 . - CDS 63103 - 63747 475 ## COG1587 Uroporphyrinogen-III synthase - Prom 63793 - 63852 3.5 - Term 64291 - 64334 0.3 58 32 Tu 1 . - CDS 64350 - 65723 1631 ## COG0165 Argininosuccinate lyase - Prom 65764 - 65823 4.2 - Term 65829 - 65853 -0.3 59 33 Op 1 . - CDS 65916 - 66545 600 ## COG0778 Nitroreductase 60 33 Op 2 . - CDS 66555 - 67745 1074 ## CHAB381_1784 hypothetical protein 61 33 Op 3 . - CDS 67742 - 68569 569 ## CHAB381_1785 hypothetical protein 62 33 Op 4 3/0.143 - CDS 68571 - 69824 1632 ## COG0148 Enolase 63 33 Op 5 . - CDS 69821 - 70864 1383 ## COG0468 RecA/RadA recombinase - Prom 70885 - 70944 6.6 + Prom 71104 - 71163 4.9 64 34 Tu 1 . + CDS 71213 - 72052 894 ## COG2107 Predicted periplasmic solute-binding protein + Term 72055 - 72116 1.1 65 35 Tu 1 . + CDS 72661 - 73452 760 ## COG0812 UDP-N-acetylmuramate dehydrogenase + Term 73636 - 73664 -0.6 + Prom 73709 - 73768 6.2 66 36 Tu 1 . + CDS 73797 - 74510 948 ## COG0607 Rhodanese-related sulfurtransferase + Term 74660 - 74707 3.0 - Term 75084 - 75117 -0.7 67 37 Tu 1 . - CDS 75123 - 75911 710 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 76064 - 76123 10.2 - Term 76284 - 76314 -0.5 68 38 Op 1 20/0.000 - CDS 76325 - 77326 1176 ## COG0822 NifU homolog involved in Fe-S cluster formation 69 38 Op 2 . - CDS 77337 - 78530 1359 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes - Prom 78550 - 78609 7.2 70 39 Tu 1 . - CDS 78642 - 79226 609 ## COG0302 GTP cyclohydrolase I - Prom 79284 - 79343 6.6 + Prom 79321 - 79380 7.6 71 40 Op 1 5/0.000 + CDS 79413 - 79943 713 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 80012 - 80061 -0.7 + Prom 79980 - 80039 2.9 72 40 Op 2 . + CDS 80166 - 81563 1194 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 81570 - 81606 6.6 + Prom 81635 - 81694 6.0 73 41 Op 1 29/0.000 + CDS 81721 - 83034 1899 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 74 41 Op 2 3/0.143 + CDS 83035 - 83619 784 ## COG0740 Protease subunit of ATP-dependent Clp proteases 75 41 Op 3 3/0.143 + CDS 83620 - 84138 604 ## COG0242 N-formylmethionyl-tRNA deformylase 76 41 Op 4 . + CDS 84135 - 85652 1241 ## COG0606 Predicted ATPase with chaperone activity 77 41 Op 5 1/0.286 + CDS 85649 - 87280 1532 ## COG0063 Predicted sugar kinase 78 41 Op 6 . + CDS 87271 - 87849 811 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN + Prom 87856 - 87915 5.6 79 42 Op 1 . + CDS 87989 - 88561 657 ## gi|257459891|ref|ZP_05624997.1| conserved hypothetical protein 80 42 Op 2 . + CDS 88542 - 89027 317 ## CHAB381_1736 putative galanin + Term 89197 - 89238 -0.8 81 43 Op 1 . - CDS 89706 - 89909 260 ## gi|223038813|ref|ZP_03609105.1| hypothetical protein CAMRE0001_1532 82 43 Op 2 . - CDS 89984 - 90706 627 ## gi|257460321|ref|ZP_05625424.1| hypothetical protein CAMGR0001_0117 83 43 Op 3 . - CDS 90706 - 91086 352 ## MJ_1673 hypothetical protein 84 43 Op 4 . - CDS 91083 - 92330 682 ## Selin_1039 CRISPR-associated protein DxTHG motif protein 85 43 Op 5 . - CDS 92334 - 93128 689 ## Theam_0623 hypothetical protein - Prom 93306 - 93365 10.4 86 44 Tu 1 . - CDS 93401 - 93574 200 ## gi|257460325|ref|ZP_05625428.1| hypothetical protein CAMGR0001_0121 - Prom 93684 - 93743 8.0 87 45 Op 1 . - CDS 93853 - 94506 536 ## gi|257460326|ref|ZP_05625429.1| putative lipoprotein - Prom 94554 - 94613 3.7 88 45 Op 2 . - CDS 94669 - 95274 515 ## gi|257460327|ref|ZP_05625430.1| putative lipoprotein - Prom 95354 - 95413 8.2 Predicted protein(s) >gi|257442272|gb|ACYG01000025.1| GENE 1 460 - 1479 1398 339 aa, chain - ## HITS:1 COG:TM0820 KEGG:ns NR:ns ## COG: TM0820 COG1979 # Protein_GI_number: 15643583 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Thermotoga maritima # 1 338 1 343 395 314 50.0 2e-85 MTDFSFCNPVRIEFGKDKEKHIGQYMKEAGAKKALVLYGSERVRKSGLMDVVESSLKANS IEFAQLGGIKSNPVLSKVNEAIGLAKEFGADSVLAVGGGSVLDSAKAVAAGACYEGDVWD FFTGKNPSTALKIFDIITLAATGSEMNCGGVVTKEQTKQKYAISAPCLYPKVSVINPQLQ ATVSREYLVYSASDIIAHSIEGYFTASVHPEIVRAYIEANIKTVIRTTEILLADPSDYDA RAEFAWAATMALNGLTYVGVGGFGYPNHMIEHAMSAVVDCAHGAGLSVVMPAWMKWYKDR NLSAFERFAREIFGLKSADEGTLALKVWFDKIGTPTSLA >gi|257442272|gb|ACYG01000025.1| GENE 2 1609 - 1794 127 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460211|ref|ZP_05625314.1| ## NR: gi|257460211|ref|ZP_05625314.1| hypothetical protein CAMGR0001_0007 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0007 [Campylobacter gracilis RM3268] # 1 61 1 61 61 102 100.0 1e-20 MNEVDKILKDATKIANELYPTYGHVQTPIEALSFYHQRKPQTSSRRSMGPARACACAAAK W >gi|257442272|gb|ACYG01000025.1| GENE 3 2153 - 2680 491 175 aa, chain - ## HITS:1 COG:no KEGG:Sked_13760 NR:ns ## KEGG: Sked_13760 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 39 154 37 147 177 75 37.0 1e-12 MIFDELIDALAQNSWQIRRRDEICPPRSEFLGGRFKNLSEDFYRFVCSFEILSDAADAVW FVSARDYASPSADEAEFCYEDFEKDSLECADNDAQRAAVRAFWSECLPFLFSVRGERCFA GILTQGADAGKIVFGAEPIYEDALVIAQNFEEFIALFLAALTDKSAAKYPLSCFV >gi|257442272|gb|ACYG01000025.1| GENE 4 2813 - 3412 552 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460215|ref|ZP_05625318.1| ## NR: gi|257460215|ref|ZP_05625318.1| hypothetical protein CAMGR0001_0011 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0011 [Campylobacter gracilis RM3268] # 1 199 1 199 199 385 100.0 1e-106 MSGKISTYGARGDQRKVRMKRQIFSELGGFVLYEPALLARYLDEHGLANGDVLAYFTQTE HGGAVTEEGIAVPILGVRSDYYDFAVTVGEADEEIFNQNEAKIISRGWIFHSSGTLKIAG IGYFKDMSRISEQNSLSFRLERGRYRLEILGGYQSANFSGSSASRDDTPILSDTPVFHLR LTPSAEPKFSGDLETSFYF >gi|257442272|gb|ACYG01000025.1| GENE 5 3536 - 4426 1004 296 aa, chain - ## HITS:1 COG:no KEGG:Coch_1814 NR:ns ## KEGG: Coch_1814 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 4 291 8 297 304 300 51.0 5e-80 MKQITMQEALDAVSERYCKGHHYENVALSDEMVRRICEVKSLVNMGFIATAITDAALQHL ATLPKLAYLFLQDSDKISGEGFRYFAEHAKLEHIGIKNVSITDEGLKAIVQIPKLKSLRL VNSRVSFAGLLAVADTKIQFYLDGGRFSKEQIAEFEQAQRDAVKSKKKLDPDDLAAARDT LLAFFTAMSEWEKFATSRIDDADDGEVQRRCDELFARYCTPVRRSGFRPEGISFSMAEGG TYGRYELTDAECESKNKIYIYAKDEHGFARRFLLVRKDGRWLVDRCQGMDGKNRGL >gi|257442272|gb|ACYG01000025.1| GENE 6 4668 - 5678 990 336 aa, chain - ## HITS:1 COG:MTH245 KEGG:ns NR:ns ## COG: MTH245 COG0139 # Protein_GI_number: 15678273 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Methanothermobacter thermautotrophicus # 11 103 23 114 138 120 61.0 4e-27 MKVDWQKLGGLLPAIVQDAGDGAVLMLAYMNEEALSLTLRTGYAHYFSRSKGRIWKKGEE SGHVQLVKSAFLDCDNDALLLKIEQCGGSACHTGARSCFFKEISLQKCGENVGSSSTCGA INFAEHGSTTSLAQKNSENSRAGQNSASCDGFQNLTPENSTTSCSNQSSVMQSPSATNSA FTNSAAERSEQNLDAAAQNSTLENSAEKGPYSVLDEIYHICLDRKLNGEPALSYVASLYA KGENAYLKKIAEEACEFALACKDLSRSELYADVAREGFGEHRAGEPRYDVIYEGADLLFH LLLALAAHNIHPDALLDELARRQGQSGIEEKRRRGK >gi|257442272|gb|ACYG01000025.1| GENE 7 6343 - 7422 1473 359 aa, chain - ## HITS:1 COG:Cj0268c KEGG:ns NR:ns ## COG: Cj0268c COG0330 # Protein_GI_number: 15791639 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Campylobacter jejuni # 1 354 1 358 362 393 65.0 1e-109 MPADLNDYFNKKNSDKKGGNLNFKIPNFGGMGKFSGVIYAIIAIIALLVISKPFVTIQSG EVGIKSNLGKYDPTPLGAGLHFFVPFIQDVFVVDTRTRIINYTSSEDMSAGIATKSGTTG GIISKNSLSVLDSRNLPVSIDITVQYRLNEATAPNTIAEWGFLWEDKIIDPRVKDVVRSV IGNYAAEELPTKRDEIAKSIDDGIRKNIEALPNSPVDLLAVQLREIILPAKVKEQIESVQ IAKQEAERTKYEVERANQEALKKAALAKGNADAVKIEAQGRADAAKIEADAQAYANKEVA KSLDANLLSLKQIETQAKFNEALRENSDAKIFLTPGGAVPNIWVDTKDKAKQSAIEREN >gi|257442272|gb|ACYG01000025.1| GENE 8 7431 - 8357 1108 308 aa, chain - ## HITS:1 COG:Cj0269c KEGG:ns NR:ns ## COG: Cj0269c COG0115 # Protein_GI_number: 15791640 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Campylobacter jejuni # 7 307 4 304 304 381 60.0 1e-105 MAQIQEAELIWKDGKLIPWAEATTHVLTHSLHYGNAVFEGVRAYKTDKGYAIFRLDEHTA RLEISAKLCLIKLPFSFEQLRQAQIDVVAKNRFDQTVYIRPLAYFGYGSMGVSSKDCSVN VIVAAWQWGAYMGEEALRKGIKAKISSWIKPAQFSMMAKAKASANYFNSQMANFEAVDAG YDEAILLDPQGFVAEGPGECLFIVKEGVIITPPNDTSLESITQNSVIEIARSLGYEVRRE RIARDQLYAANEAFFTGTAAEVTPISNIDGRIIGKGEMGEITSRLQKAYFAAVTGKDSKF EHWLTYVK >gi|257442272|gb|ACYG01000025.1| GENE 9 8511 - 9635 1044 374 aa, chain - ## HITS:1 COG:Cj1351 KEGG:ns NR:ns ## COG: Cj1351 COG2829 # Protein_GI_number: 15792674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Campylobacter jejuni # 1 369 1 325 329 169 33.0 7e-42 MKFKALTFALCAISLAAQDLSELYAKASEYEAKGDYKNAMIYYKKIAAASLTESDEKSRR NSAKNSIVSAQTPASRDDIAILNSAESQNSFAQNSAAPKPTSSNFADANSAASDSASNLE SSNFASLSQNSTVSNSAPQGEQNGRNFGFLGLKYYEPIYMLFTHDFSKKPDRKADELHFE FSFERPITYDALGLGEKISFAYAQNSWWQITQDSAPFRESNYRPELYVSAPVPFADELKI GAMHESNGKGGEESRSWNRLYAQSTWSAGGFSITPRVWYAFWLDRTNEDIADYMGYGDLR ASYTFGKQRLSALWRNNLHFDGNNRGAIELNYSFPIFNSGFYGYLRYFNGYGESLADYKR SVNKIGIGLSFVEF >gi|257442272|gb|ACYG01000025.1| GENE 10 9625 - 10191 412 188 aa, chain - ## HITS:1 COG:Cj1350 KEGG:ns NR:ns ## COG: Cj1350 COG0746 # Protein_GI_number: 15792673 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Campylobacter jejuni # 1 178 1 179 191 115 37.0 4e-26 MKVGEISMKTCVILCGGKSSRFGSDKTLFPFRGHPSMTHFLFSRLSREFERVFACAKSSK FNPPLPMIYDEFEEFSPMGALYSALKPFSGERIFIIPADMPFVEISTIRALSEQEGQICV AGDEAHRHSLCGFFDAALAPRALELYRTKEHKIGALIDRVNFKVLNFKNKEQFLNINYQN DLKGVDEI >gi|257442272|gb|ACYG01000025.1| GENE 11 10253 - 11029 887 258 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460226|ref|ZP_05625329.1| ## NR: gi|257460226|ref|ZP_05625329.1| hypothetical protein CAMGR0001_0022 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0022 [Campylobacter gracilis RM3268] # 1 258 1 258 258 456 100.0 1e-127 MKVITIAVVNGRVVNEKELIASIADYDDFTAVAEQLRKGLKSRYFTSREHARIYKKISVE TGFRRVRFDYKPYKDKISNLIAEGYTVKAILKKIGEEDEAFKNAVTAPGLTHFISVTFKD EKTRLRATAKKSEDFLYAYRFEIKKMHFQGVSNKEILKYMKAHYEKDFAKVSERDLANFI EANAVLDTDRKLSLYKKPSLYDPHFSEIMKLYASGMRVYDIWKTLKAKYPELAKLQAPSL YQFIANNALGKAKYMQKD >gi|257442272|gb|ACYG01000025.1| GENE 12 11284 - 11643 320 119 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0132 NR:ns ## KEGG: CCV52592_0132 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 114 1 114 119 124 65.0 9e-28 MTSEKFIYEVNTVTKFIQIYCDGKHADAPKRDGAVLHDYKDDRGLVQTHFHLCSDCERML CYAYARLGACPHTEKPRCHHCPHPCYEREMWVNMAKMMKYSGMKLGLTKIKKLFSFKKS >gi|257442272|gb|ACYG01000025.1| GENE 13 11745 - 12773 1036 342 aa, chain - ## HITS:1 COG:YPO2450 KEGG:ns NR:ns ## COG: YPO2450 COG0628 # Protein_GI_number: 16122671 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 17 338 17 340 352 171 34.0 2e-42 MSNLGESLKLQMSLMSVACVVIILAGLKAAQAIVVPFLLAIFITVLVSPLVLYVQKIRVG RVFSFLIITFAFVAIIVFFGAVIFDAIKEFSARLPELQAKFEEVLGGVSAKLSRFGIELN AANLGIDPSEAAAQLSALLRKTGSIVSTGFFIFIMVSFMVFESSVIDEKIRYFSQSSRAT HTFVKKFASSLKKYLLIKTIASACTGALIGLGLWALGVPYAALWGILAFVLNFIPTIGSI VAVFPTLFVTLATMDISSSIWTIAIYLVVNVAIGNIIEPRFLGQGLGLSTISVLAGLLLW GFVLGIGGLFLAVPLTMSLQIALASNDKTRFIATLLSNKVER >gi|257442272|gb|ACYG01000025.1| GENE 14 12956 - 14044 1195 362 aa, chain + ## HITS:1 COG:Z4850 KEGG:ns NR:ns ## COG: Z4850 COG0500 # Protein_GI_number: 15803988 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 EDL933 # 11 360 2 351 352 330 45.0 2e-90 MKLPKQLLDRYGAERQSAGEAQRTANKIAFAPVVFQVSRLMKKFGILSALNEARDGLSIS EIAQKLSLSEYAVKLLLESSLSIGTVLLCGEKFRLSKAGYFLLTDELVGVDMDFIHDVCY EGLFRLEETLKSGKPEGLKVFGQWATIYEALSHLPPHVRKSWLAFDHFYSDLAFEPALKI IFSRKTDKILDVGGNTGRFAKRCVGYDENVRITIMDLAGQISMMKDAVAGAKGAERIDGL AADLLDPATRFPRGFDAIWLSQFLDCFAEEQIVSILARAAKSMSEQARLYILEPFWDRQR YETAAYSMTQISVYFAAMANGNSKIYHSDDMIKFAQRAGLKISRIHDGLGVGHTLLCCER AR >gi|257442272|gb|ACYG01000025.1| GENE 15 14044 - 14523 560 159 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460230|ref|ZP_05625333.1| ## NR: gi|257460230|ref|ZP_05625333.1| hypothetical protein CAMGR0001_0026 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0026 [Campylobacter gracilis RM3268] # 1 159 1 159 159 308 100.0 1e-82 MDAQSLSARLNKPIKILLVLFGIGILANVAMEFYAEKKRGELERNFCESKQVRDALVRIN EGAPRRIDDVTTLKGAACEGGSFIYDYALNSSPNLDLSALDAGDTEILKEMLFAKAKASF CGADFSRRLRELGKTMVLNYEIEGLPPIQLKLDKNSCER >gi|257442272|gb|ACYG01000025.1| GENE 16 15098 - 15379 362 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460232|ref|ZP_05625335.1| ## NR: gi|257460232|ref|ZP_05625335.1| putative polyphosphate kinase 2 [Campylobacter gracilis RM3268] putative polyphosphate kinase 2 [Campylobacter gracilis RM3268] # 1 93 10 102 102 184 100.0 2e-45 MRVDEITTLTGAECKDGSFIYNYELNDGMGMKFDSVGNDQKTVIQNVIDSQNKQIFCNQM KVMHPLINSAIWSYKIKSGEEFIRVEFKPSDCK >gi|257442272|gb|ACYG01000025.1| GENE 17 15878 - 16492 801 204 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0364 NR:ns ## KEGG: CHAB381_0364 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 20 202 41 223 226 183 49.0 3e-45 MKNFFLAAIVCALFSGCAYEAQFNQNADVAPFDDTISATNAMQSALIYIPSELMGTKSYA ASSKLGRDDELKIDVGEFVAGEAKRFFGTYLRRVSVTDDEKALQGKGLVIAPELSSFGFG FYSSDGIDVSAKPYVRYNLRLKMFKNGKPIYNQNIAVNERNFGEEEFFGGGQGSYAQIGG IFQKSMANDYAVHAREILDVINDN >gi|257442272|gb|ACYG01000025.1| GENE 18 16565 - 16966 410 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460235|ref|ZP_05625338.1| ## NR: gi|257460235|ref|ZP_05625338.1| hypothetical protein CAMGR0001_0031 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0031 [Campylobacter gracilis RM3268] # 1 133 42 174 174 169 100.0 8e-41 MLGCVDLIELSLGFVRTFRVPFISYERFLKLQEILKFLLLFAYVAGVFLTIKFGFAEAAI YAAAGIFAILIASKLVVARRLDGRVGLRLRDCLLLRGRDDTGAVVFFCIRPSRAEREALR IYFLKNFSYDIKA >gi|257442272|gb|ACYG01000025.1| GENE 19 17254 - 18816 1119 520 aa, chain - ## HITS:1 COG:no KEGG:LGAS_0485 NR:ns ## KEGG: LGAS_0485 # Name: not_defined # Def: acetyltransferase # Organism: L.gasseri # Pathway: not_defined # 403 512 51 156 158 79 39.0 3e-13 MRLERIGEGSALIARIEAINVAAFPEIERISIKNFLKMSRKGQLEIAAIFEDFTALVAGG AADKHHAAAGKSFEVSNLTSKNFKVQANARSEALNLKRDRDGGCDDAAHENFKAANSKSE NFKTDDLAGKSCGMQGAANENLCVRGQNFGATDRKYGALDWNFDAANLGASIQDLETADQ KFGAAEASSQNTDQSCGARTSALSNVINSIHDEAAQRDFCGTAGQDFVSCAAQNLNGEEL VGFCVYRTEQTYKRAVLHHKQPPPRLNADKILKSKAHSGAEFACNAGSFGAASNEISDLS AGDGTLGAGQGLASDNIKRADGDLKQASAEEILYRGATTDKISNVSAHGKILPSATESEI LSDAARGKILCYDESEISHRDESKISRCKKSEYSSGKQGEFFYVAYLAIDTKFRGLGLGS KLLALITEQNPRAQIVLDVEPPHEDASNLAQRLRRIEFYGRHGFRRCGKFFNYAGLSFEI LAKPPLSAPQQGFDVASFVKFIGAGNKFRFKITDAPLYKN >gi|257442272|gb|ACYG01000025.1| GENE 20 18946 - 20061 1366 371 aa, chain - ## HITS:1 COG:Cj1634c KEGG:ns NR:ns ## COG: Cj1634c COG0082 # Protein_GI_number: 15792939 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Campylobacter jejuni # 1 369 1 360 362 399 56.0 1e-111 MNTFGERLRLSTFGESHGTAIGGVLDGLPAGLEIEISNIQSELDRRKPGGKYATPRKEAD EIEILSGIFDGRSTGAPIGFIIRNANQHSKDYENLKDIFRPAHADFSYFAKYGLRDYRGG GRASARETAVRVAAGAFAQILLNHFKISVKSGICGVGEIYAENLDFDFAQNSEIFALDPA VESAQKELILSVKNAGDSIGGYVLTRVTGVPAGLGEPLYGKLDAALAGAMMGINGVKAVQ IGAGVKASTLKGSENNDFMCASNDAIRTNGGKIGANFASNNAGGILGGISSGTPIEITTH FKPTPSIFMAQRSVDVRGTDAVCELRGRHDPCIAVRGSVVATAMARLAIADALLLNASAT LGNLKRIYGED >gi|257442272|gb|ACYG01000025.1| GENE 21 20058 - 20969 926 303 aa, chain - ## HITS:1 COG:Cj1635c KEGG:ns NR:ns ## COG: Cj1635c COG0571 # Protein_GI_number: 15792940 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Campylobacter jejuni # 1 220 1 221 224 231 56.0 1e-60 MQNLEKLQEKLGYKFKNQTHLKIALTHKSAKNGHNNERLEFLGDAVMDLIVGEYLFKKFS SDEGDLSKLRAALVNESSFSKFAKFLGIGENLNMSLSEERNGGREKPSLLSDAFEAIMGA VYLESGLQNTARIAIAILEILYPRISFNELVRDYKTALQELTQAKFGVTPEYILLGSSGP DHKKSFEMAALVGGKWLSSAVGASKKEAEQKCAQIAIDLLQNSASHGTSAQNSEQTACAS DAQSGANCAQDGKKGLRGGSGRAQDSKKGEHNNRGGTPSAKKSNERNGRDTDRQGGGEQG GAL >gi|257442272|gb|ACYG01000025.1| GENE 22 21369 - 21791 361 140 aa, chain - ## HITS:1 COG:Cj1636c KEGG:ns NR:ns ## COG: Cj1636c COG0328 # Protein_GI_number: 15792941 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Campylobacter jejuni # 1 138 1 138 146 169 57.0 2e-42 MKSVKLFSDGSCLGNPGAGGWAYILQYGDAIKKASGAEAMTTNNQMELTAAIMGLSALKQ PCRVELFTDSEYVVKAISSWLAKWVATDFKGKKNADLWRRYLAAAAPHEIKASWVKGHAG HPQNEECDAMARAAAEAIKG >gi|257442272|gb|ACYG01000025.1| GENE 23 21769 - 22794 1158 341 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1611 NR:ns ## KEGG: CHAB381_1611 # Name: not_defined # Def: TPR repeat-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 341 1 339 339 340 55.0 5e-92 MDNFFLDDRDPIFGLIMLISIILLVSILSYIWGVFSKKNERQSLENFIKKFDTLDALSTE HRQLLASPQIDIPTLGILASSFVKSGDFERAIEIYLIALSKASGGVQREFILTNLGIVYF KAGFLGRAEEVFLQALKLRPRNKEALTHLTVIYERLKRFNEALEVLDALREQDTEVYAQS QFERAQIIANDANTPFNKKIAKISKLNFKGAGRFCMELFIKNKEPMDGFDRFPPIEQAID LIYDFGAAVNTQDAEYNALFYALGRSDQKPRSASKIFEINALMAMKDAGFEDAGLSFSYT CAKCKSSVGLFSHRCPVCYELGSMEIRAQISEKTGEIGQTF >gi|257442272|gb|ACYG01000025.1| GENE 24 22855 - 24981 2033 708 aa, chain + ## HITS:1 COG:Cj1638 KEGG:ns NR:ns ## COG: Cj1638 COG0358 # Protein_GI_number: 15792943 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Campylobacter jejuni # 1 416 1 418 605 429 51.0 1e-120 MIKNESIENLLATVDIVDVVEKYVPLKRSGANFVGVCPFHDDSHPSMSVSSKLGIFHCFS CKAGGNAIKFIQDYEKISFPEAVEKLAGMYNFALQYTGAKVQERSEEKKVLGILNAYYQS CLYQNPAAVKYLHDRGLSDQSIRKFGLGYAGASAQTIRVLQNEEIPPQDALNAGAVKQNE RGLYASFIERITFPIYNHASKLVGFGGRTISDNPAKYVNSPQCALFDKSKIFYAFDLAKK SAIAKKTLIITEGYMDVIMLHQAGIDNAVAVLGTALTPAHLPLIKRAELNVVLSFDGDAA GINAAIKSARLLCLNKIDSSVAIIGGGADPADMIAAGKVRELEQIYASGMESGEFLIRRI AKKYDLARPVQKEAALNEIKEFTAALGPVLAESYQSLVAQILNVSPGSFNLSSGGKNFGA GFEGRNFNESGSFGSRDFGAYGGHNADGRDGASGSLNGGNFDRAQNTARYESSAPPAASA RLGRTLLRRKEIAELQIIKSMLLDGEMAELGLGCLERRDFRMHGDIFEAFLAFSRSGGNF KNFIAGEDGNVDSASENFTAGGAGEIILGESVNLKSSENSNEQNFNRQGSAGTVNLKGSA QQGANGGEKQKVNNVAKQGESKAAAQNIQSAQSAQNIQNAESEARENLRALALDDEILPI GGAALFNDACKILRRNALQDLMQKLKNSDAPDKIERILEYQKKINQLK >gi|257442272|gb|ACYG01000025.1| GENE 25 24991 - 25974 1256 327 aa, chain + ## HITS:1 COG:Cj1633 KEGG:ns NR:ns ## COG: Cj1633 COG0482 # Protein_GI_number: 15792938 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Campylobacter jejuni # 1 327 1 326 327 394 59.0 1e-109 MKALALFSGGLDSMLAVKLIVSQGIEVLALNMDIGFGGKDDKSEIMRRRAAAAGANFKSV DIRSEYLQQVLFGPKYGYGKHFNPCIDCHGYMFKTALAMLQSEGASFIITGEVLGQRPMS QRAQALAQVGGLSGDEEGLILRPLCAKLLPLTTPEIKSWVDRGALLDISGRGRARQMQLA AEFGFEDYETPAGGCLLTVQSFSERIKDAIKFEKIETPADAEILKFGRHLRLPEGAKLII GRDESDNKKLAAVQNPKFSEIKFKDDVVGALSLLSRGASEADRELAARLALTYAKTDAAR SYTLLIDGNELSVSPFESKDAARKYFV >gi|257442272|gb|ACYG01000025.1| GENE 26 26325 - 26735 312 136 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460246|ref|ZP_05625349.1| ## NR: gi|257460246|ref|ZP_05625349.1| hypothetical protein CAMGR0001_0042 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0042 [Campylobacter gracilis RM3268] # 1 136 1 136 136 273 100.0 3e-72 MGAFGSVEHPLNLSDFSFLVRERGKFHLDLSRECVNGAEIFWNACSFRRGSVIILFEGEF DLAPILRSCAEINIDETPNMGNSPAATKLAKRAMSEGQIAVLFSASNGIEWMDIYAPGAV QAEILKLADEINGDEI >gi|257442272|gb|ACYG01000025.1| GENE 27 26835 - 28079 1152 414 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1485 NR:ns ## KEGG: CHAB381_1485 # Name: not_defined # Def: periplasmic protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 2 412 39 450 459 418 51.0 1e-115 MSGFSFYDDPLSYINNVRAKSGLNYFAQNEILNISALNHAKYVVANEAMSHDETTGRAGF TGEDPSKRAFYAGYNAVVRENLSYNSSDLKSAIDGLLSAIYHRFAFLDFASDEIGIGYFE HGKKSSYVFEMGNSRLNAFCSQNLNDEGSGKFLLGMCKNETLRMREDKFKSATALNSRPY VYYPNDEPALAFFSNEIPDPMPECKITANPVSVEFNAEEPPVAMKSFKIYEGGRELQNVK ILDKNSDPNAILSDRQFVLFSRDVFKFDAKYGAEFNYEQSGKQKTLRWEFITQAPKFRYF VVQGGENLSVKNGAFYDIFVAPKDCNDLMKSYKTSYSFMDKPEISSPAANMLRVKLNGAK GAKLEISTGNGAIINLYLSDDSKSYGGMGKIYAAIAVVLTAIILFYLLARRRGR >gi|257442272|gb|ACYG01000025.1| GENE 28 28162 - 29745 2116 527 aa, chain - ## HITS:1 COG:Cj0932c KEGG:ns NR:ns ## COG: Cj0932c COG1866 # Protein_GI_number: 15792261 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Campylobacter jejuni # 7 525 4 522 524 877 80.0 0 MTTPNDLDKLGLKNIKKINHNLSYDELFELEKAMGEGRVSSNGTFMVDTGIFTGRSPKDK YFVKQDPSQKYIAWGKVNQPISKELFDKLLAKAKAQLSGKEIFIQDAYCGASKSSRKNVR FVTEVAWQAHFVKNMFIRPSESELAEFHPDFVVYNACKCKNEDYASDGLHSDVFVIFNVE ENVAVIGGTWYGGEMKKGIFSMMNYWLPLEGKLSMHCSANVGKEGDTALFFGLSGTGKTT LSTDPNRKLIGDDEHGWDDEGIFNFEGGCYAKCINLDPSSEPEIYAAIKRDALLENVVAD EAGIVDYKDGSKTENTRVSYPIYHIDNYEPSSAGGHPKNIIFLTADAFGVLPPVAKLTKE QAMYYFLSGYTAKVAGTERGITEPVATFSACFGEPFMPLHPTVYAKLLGEKIDKHGVSVY LVNTGWSGGAYGVGKRMSIKATRACINAILDGSIKKCEFENFEKFNLAIPKELAGVETKL LNPINTWTHPAEYKITRDKLAKMFEANFKRYEDVKEGVEFAKAGPAA >gi|257442272|gb|ACYG01000025.1| GENE 29 29878 - 31716 1993 612 aa, chain - ## HITS:1 COG:Cj0933c KEGG:ns NR:ns ## COG: Cj0933c COG5016 # Protein_GI_number: 15792262 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Campylobacter jejuni # 1 612 1 598 599 847 68.0 0 MAKKLIDVMDTTFRDGFQSVFGARVAMEDFLPAVSAAKEAGITHFEFGGGARFQSLYFYL NEDAFEMMDKFRSIVGPEANLQTLSRGVNTVTLDTGSREIIDLHAKLFAKHGTTTIRNFD ALNDVENLKFSGECIHRHGLKHEVVITMMDLPPGCSGAHDAAFYERILRQILDAQIPFDS ICFKDASGTSSPQKVYETIKRARKILGDGVHIRLHTHETAGVSVACYQAALVAGVDGIDL AAHPVSGGTSQPDILTLLHATKGQNFDLGLDAEKILKYEEVLGECLKDYFMPPEATQVSP LIPFSPMPGGALTANTQMMRDNKILDKFPAVIKAMREVVEKGGFGTSVTPVSQFYFQQAF NNVMFGPWKKIAEGYGKMVLGYFGKTPVKPDEGVIKLAAEQLGLQPTTKHAVDIADADES KSVAYAQKILREQGIEPSEENIFIALACKEKGIAFLKGEGKVMSRKKEDVAPAESHQSGI SKNGKFDVKINGKIYNVEFAGQNVLVNGDRYDVSFDTSAPAKPQPQGSAGEQPAADARGG TDDNDIKATLPSNVFKILIKEGDAVKAGQNVIVLEAMKMEINIESPRDGVIDKILVAQGD TVDADQVLAILR >gi|257442272|gb|ACYG01000025.1| GENE 30 31759 - 33120 1429 453 aa, chain - ## HITS:1 COG:VC1275 KEGG:ns NR:ns ## COG: VC1275 COG4664 # Protein_GI_number: 15641288 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: TRAP-type mannitol/chloroaromatic compound transport system, large permease component # Organism: Vibrio cholerae # 1 448 1 427 427 436 60.0 1e-122 MIGIVMFAAALFMLLLGFPVAFTFGAVAVIFGFIYGLSEAWDYAQGFEILTEAFEDMSRQ FFSLMPNRIYSIMENQLLISVPLFILMGMILQKTRLAERLLESMAFLFGGVRGGVAISTV LVGALLAATTGIVGATVIAMGVISLPVMMKYGYDKPLATGTIAAAGTLGQIIPPSIVLII LGDILSVSVGDLFSAAVIPGLVLVGFYVIYIAIISYICKDYAPPVPPLEGLSKSKQIFIA LKNVVPVLVLILLVLGSIFAGIATPTESSSVGCLGAIALAVLYRTFSFRLIYDALKNTAK ISGMVFMILMGATAFSMIFSYTGGDEVVKNFMENLPGQAWGFIALTMVVIIVLGFFLDYV EISYIILPILLPIVESLHINPVWFAILIAVNLQTSFMTPPFGFSIFFLKGVTPPQIHTTD IYKGVLPFILLQILVLLTLAIFPGVFGLKAFLG >gi|257442272|gb|ACYG01000025.1| GENE 31 33226 - 33795 413 189 aa, chain - ## HITS:1 COG:VC1274 KEGG:ns NR:ns ## COG: VC1274 COG4665 # Protein_GI_number: 15641287 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: TRAP-type mannitol/chloroaromatic compound transport system, small permease component # Organism: Vibrio cholerae # 8 171 7 169 177 115 46.0 4e-26 MKGFLRRLERAFDAFANILGVLSIVFLALLVIVVFYNVVARYLFPAANSVAMQELTWWLY SAMFLFGVTYALKENAHVRVDIFYEKFSPTAKALINILGTIFFILPFVALVAFFSIDYVS EAYTSHEASANPGGMQHLWIIKSAITLSYAFLFIYAFGFLIKNINALLDVRENKGSEFLS GNSSGAQSV >gi|257442272|gb|ACYG01000025.1| GENE 32 33892 - 34521 542 209 aa, chain + ## HITS:1 COG:STM3194 KEGG:ns NR:ns ## COG: STM3194 COG1495 # Protein_GI_number: 16766494 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 2 190 19 212 225 71 28.0 1e-12 MILKFQNRYSKKFLAFCAIWALFWLAFSYFFLQKFLFIYPESFSIHVRFALCAIALGAVI LAVCGKDVYGAICGYAVWFYGAALGFVSSLNLAKIHTVLRESGDMSGMSGCGGAVRFLNF DISAVPIFKPFNSCAFDVPAVPTDTTLEGLQAKLTALYSGGWYLFPASKSVDLAQFWSFI FIFFAIIWMIGILLGFLNKKAWDLKPHAK >gi|257442272|gb|ACYG01000025.1| GENE 33 34523 - 34906 401 127 aa, chain - ## HITS:1 COG:Cj1343c KEGG:ns NR:ns ## COG: Cj1343c COG2165 # Protein_GI_number: 15792666 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Campylobacter jejuni # 2 70 3 70 171 63 43.0 6e-11 MKGFTMIELIFVIVILGVLAAVAIPRLIATRDDAEVVRTAHNVATSLNDLVGYYTAQGEY NQDFSQMMNVPNPIRVKGHICATYTYDNKEQVTLTKGRDGLCDRVWSMPGLKNIDNIYSS NALIIVK >gi|257442272|gb|ACYG01000025.1| GENE 34 34970 - 35743 656 257 aa, chain - ## HITS:1 COG:Cj1681c KEGG:ns NR:ns ## COG: Cj1681c COG1218 # Protein_GI_number: 15792985 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Campylobacter jejuni # 1 241 2 246 254 159 36.0 7e-39 MDLNELLALATDAAKKANAAIMQNYDKFDIFVKADRSPLTNADLAANDAIMRALEPSGIA ICSEERVLDSKRRMSEERFWLVDPLDGTKEFIARNGEFCVCIALIEHGRPILAVIGIPIS GDIYSSNGGRVYKNGALLARPNSAPQTFMHGHHGKSVKYAQFAQRFKMQLVRKGSAIKFC ILAEGGASAYARFSDCSLWDIAAGDFLLHQNGGAVVDLKTMKAPLYNGKSLINNHYLAVG ASAMKNLSEMLEFAKNF >gi|257442272|gb|ACYG01000025.1| GENE 35 35892 - 36578 880 228 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_0460 NR:ns ## KEGG: CFF8240_0460 # Name: not_defined # Def: SapC # Organism: C.fetus # Pathway: not_defined # 6 216 166 376 380 208 45.0 1e-52 MTPVVLDSVKHADLKYHADAFPTAPFVPVIAPEIPFCADNLVIVFTIEKEPKMVALLGRT KNVLIDKDYKGTVPSSVQNYPFFLAQIGEQTAICFDKDAQQIKGDGEALFKDGKPTPFLQ NLKEVMKNYADLDMRTRVAAAEFQKAGILEAKELGINSSGKESSLLNGFSVVNREKLLKL SDKKLADFARRGYLELAYFHLKSLANFQRLGDKIMQLDPPITPKEAKK >gi|257442272|gb|ACYG01000025.1| GENE 36 37574 - 38806 1352 410 aa, chain - ## HITS:1 COG:SMb21042 KEGG:ns NR:ns ## COG: SMb21042 COG2195 # Protein_GI_number: 16264362 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Sinorhizobium meliloti # 2 409 11 413 413 315 40.0 9e-86 MDIVQRFLNYTKINTTTNRTAGAAGIMPSNPKEFELAGLIKGELEALGIKNISLSEKSIL IAKIPSNLDAPAPRVAFFAHLDTSAEQTNDTKAQIVRYEGGDICLNKELEIYLKESENEE LQDYKGDEIIVTDGTSLLGADDKAAIAAIVNALEFFVQNPQIKHGEIIACFVPDEEQGLL GAKALDVSEVGADFGYCLDCCGIGEFIYENWNAGDCVVTFKGQSAHPMNAKGKLVNSLLL AHKFISLLPAGEAPEYTEGKEGYFWVKELSGNSAKTVLKIDVREFDEKRYEQRMEFLQKT ADGLRAIWGDRIEISLNDRYKNVYNFLKNDDAPAIRFAKQAFKSLNIEPKIKPMRGGYDG AVISAKGLPCPNLFTGGHNFHSIYEYLPVGSLKAASEVVKRIITLATKEA >gi|257442272|gb|ACYG01000025.1| GENE 37 38819 - 40165 1611 448 aa, chain - ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 1 448 1 432 432 361 53.0 1e-99 MQTFRLFLALAGIVAVVALLIMKKDTKTVLIGVGLVLCVLCLKPLDGLNAFTSYMTKAGL IKAICASMGFAFVMKFTECDRALVNLLTRPLGNIGFLLIPIVVALTYFINIAIPSAAGCS AAVGATLIPVMMAAGVKPEMAGAAVFAGTFGGVLSPGSAHNVFVADMVKAHNPSYTVQDV IGVQFSSAITALIVVLIVISITAIVCKDYTKGVNYLAQKESGANSVASNSADGSNLDAQP QKINVLYALMPLVPLVILIIGGTSKLNTISFLKWTKMGVAEAMLLGAIVTIVITMSNPQK ITKEFFKGMGSAYAEIIGIIIAAGVFVAGLSACGAIDFVIEWLKGEQGYVKFGGTFVPFF MGVVTGSGDAASMAFNTAVTVHADALGFEQDKLGMAVAISGALGRSASPIAGACIVCAGL AMVSPIQIAKRTALGMFLSVCIIAFFIL >gi|257442272|gb|ACYG01000025.1| GENE 38 40177 - 40875 1048 232 aa, chain - ## HITS:1 COG:PM0454 KEGG:ns NR:ns ## COG: PM0454 COG3340 # Protein_GI_number: 15602319 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Pasteurella multocida # 1 230 10 241 243 250 51.0 2e-66 MKRALLLSASSYKDSGYLNHCKGWIKEFLGDLWKDEILFIPFAGVRRTNEQYEQKVADCL ESNNIRSIHRFVDMKAAVKNAKSICIGGGNTFVLLNELYKFDLLGAIKDAVDSGTPYFGW SAGANVAGKTMMTTNDMPIVFPPSPVALGIFPYQINPHFISGKISNHNGESREERLEEFL IVNQNDSVYAMPEGSAFLINGNECEVMGHADVLKFEYKKEISRIAVGSKFKI >gi|257442272|gb|ACYG01000025.1| GENE 39 40886 - 42202 1611 438 aa, chain - ## HITS:1 COG:HI0584 KEGG:ns NR:ns ## COG: HI0584 COG1473 # Protein_GI_number: 16272528 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Haemophilus influenzae # 13 434 6 421 423 336 43.0 7e-92 MDAIAQKVEALKSEMIGDRRFFHSHPETGWFTFFTTAVIADRMQRLGYEIKLGREVVKAE ARQGVGSKDACEKAKQRAEKLLNADQIKFLDAMEDGLTGLVAQIDTGRAGKTVAFRFDID GVDVTESTDADHRPFKEGFRSDISGITHACGHDGHITMGLALAKLIAQNLDDFSGKFRFI FQTAEEGTRGAVGMEAAGVTKGVDYLLGGHIGFQANTMRGIICGTKKLLATTKFDVSLKG KSAHAAGAPQNGANALLAAAEMALDMHGITRHADGVTRINVGVLRAGEGRNVIAPNGYLA CETRGESTELNEFMKSKCMDIVEGVSKIYGVSYDVQITGGTAGGDSDEATTQLYEDAAKA SPFIDDDKIVRELSFGACEDFAHFMRSVQDAGGKSGYLMIGTTLAAGHHNAKFDFDEDSL LAGVDVYLRCAYKLNGKA >gi|257442272|gb|ACYG01000025.1| GENE 40 42213 - 43451 1311 412 aa, chain - ## HITS:1 COG:PM0160 KEGG:ns NR:ns ## COG: PM0160 COG0624 # Protein_GI_number: 15602025 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Pasteurella multocida # 1 411 1 409 412 317 42.0 3e-86 MEINTQRLKSEFEQISRFGALAGGGLTRLAFSREDKEARDFLISLLQKENFKIKIDDTGN IFAKFSGVNNPDLPSVSAGSHIDSVPQGGFYDGTLGVMAALEAIRTVRDSGERLARPLEL IVFVCEESSRFKMATVGSKIISGKLSRQRLGELKDKDGISLFDAMGDFGLNPANLKNCVL PKSSFHSYIELHIEQGPVLQRRGIPVGVVTGIAAPVRYELRIEGRADHSGATPMDMRCDA LACASEIVLSAERIAKEGKTTVATTGYANALPGVLNVIPGSCTLGLDIRDIDEEALRAAD YKICAAIDEICARRGCKFELKNLIKDRPVKLSEEMIALLESCAGELKIPSLRLPSGAGHD AMNMTELADRVGMLFVPCKDGISHNVNESINWHDAFAATKVLAAAMLSLAKK >gi|257442272|gb|ACYG01000025.1| GENE 41 43690 - 44691 1198 333 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0963 NR:ns ## KEGG: CCV52592_0963 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 5 331 2 329 331 313 51.0 6e-84 MEQGSLEGLYEKLNGLKSVIDKEECLFDAIRDAVEAENFEFAAQICDFVLNDDFEKFGAV LRTRALLWLTNHIAQNLKESEYPNFGDFTDCLWKFKWIVSGVAKSSMIEKELIDETNEAM LFYYERLELSPASYYKALMNQNIVMGDARGAKANYELWKKLAKDDMSDCEACEASDEIAY LNFAGEHAAALELAAPILSGELTCGEVPHTTYAPILFSMIALGRTWEAKALLPKAAATIE SNPRVINQIAPLIEIAVRLDERETALSLARKHSAAILDGNDDLNDLRFFIAVSAFGDEGD YKTALELTGKFDARNQNFYYADYLNKFYEEFGV >gi|257442272|gb|ACYG01000025.1| GENE 42 45257 - 46594 1528 445 aa, chain - ## HITS:1 COG:Cj1290c KEGG:ns NR:ns ## COG: Cj1290c COG0439 # Protein_GI_number: 15792613 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Campylobacter jejuni # 3 445 2 443 443 663 77.0 0 MKELKKILIANRGEIALRALRTIQEMGKQAIVVHSTADQDALYVKYADASVCIGGPRSSD SYLNIPAIITACELTEADAIFPGYGFLSESQNFVEICAKHGIKFIGPSVEAMTLMSDKSK AKQVMMRAGIPVVPGSDGAIASVEEARKLAAEIGYPVIIKAAAGGGGRGMRVVEREEDIE KLFWSAESEAMSAFGDGTMYMEKYITNPRHIEVQVLGDEHGHVVHIGERDCSMQRRHQKL IEESPAVILDEPTRKSLHETAVRAAKAIGYASAGTFEFLYDGKDKKFYFIEMNTRLQVEH TVSEMRSGLDLIEWMIRIAQGEKLLPQSEIKFSGHALECRITAEDSKSFMPNPGKITKYV APGGRNVRMDSHVYEGYSVPPYYDSMIGKLIVYDKDRTRAIAKMKVALDELIIGGIKSTR DFHLMMMNNPDFLSNNYDTNYLAKH >gi|257442272|gb|ACYG01000025.1| GENE 43 46591 - 47049 578 152 aa, chain - ## HITS:1 COG:Cj1291c KEGG:ns NR:ns ## COG: Cj1291c COG0511 # Protein_GI_number: 15792614 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Campylobacter jejuni # 1 152 1 151 151 132 54.0 3e-31 MTKAEIKELMDFFGEKQGINELKIKDKDFEIEIKKYGPCGGSTPQLAVPAPAPQLAAPSV NVLVGDKPASKGAMDTIDSPMVGTFYKAPSPGAAEFVSVGQVVHKGDTIGIIEAMKIMNE IEAEFDCRIKKALVDDGQPVEYAMALFEVEKL >gi|257442272|gb|ACYG01000025.1| GENE 44 47470 - 48519 1062 349 aa, chain - ## HITS:1 COG:jhp0661 KEGG:ns NR:ns ## COG: jhp0661 COG0252 # Protein_GI_number: 15611728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Helicobacter pylori J99 # 18 346 1 329 332 350 56.0 2e-96 MGLLKKFAFITFFIVSSLAAAKPNIYILATGGTIAGSSASATEGNYTAGSKGIEDILSAV PQLGDLATIKSEQISNIGSQEMNDEIWLKLANRVSELLTKNDVDGVVIVHGTDTMEETAY FLSLVVKSKKPIVLVGAMRNADSMSADGPLNLYNAIAVAADKNAREKGALVVMNDEIHAA REVTKTNTTNVAAFASPNSGKIGTVNYGVVNFYMAPLRKHTVASEFNIKDLKAFPRVDII YGHAQDNGDLVDAAVQKGAKGIVVAGMGNGNLYPDTEAALAKASEAGVIVVRSSRTGSGS TSVSSEVDDAKLGFLTADNLNPQKARVLLMLALSKTSDKAKIQSFFATH >gi|257442272|gb|ACYG01000025.1| GENE 45 48643 - 49206 736 187 aa, chain + ## HITS:1 COG:Cj1292 KEGG:ns NR:ns ## COG: Cj1292 COG0717 # Protein_GI_number: 15792615 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Campylobacter jejuni # 1 186 1 186 186 339 86.0 2e-93 MGLKSDKWIRQMSQQHDMIAPFCEENIGRGVVSYGLSSYGYDIRVAREFKIFTNVGGTVV DPKNFDAKNVVDFEGDVCIVPPNSFALARTIEYFKMPRDVLAICLGKSTYARCGIIVNVT PFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDEPCEVSYCDKKGKYQSQKGIT LPRILKD >gi|257442272|gb|ACYG01000025.1| GENE 46 49210 - 51441 2196 743 aa, chain + ## HITS:1 COG:Cj1686c_1 KEGG:ns NR:ns ## COG: Cj1686c_1 COG0550 # Protein_GI_number: 15792989 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Campylobacter jejuni # 2 561 3 564 567 748 67.0 0 MKNLIIVESPAKAKTIKNFLGDDYDVIASKGHIRDLPQKKFGIKIKDKSFEPEYEISADH DQIVKQIKTLAKKADQIYLATDEDREGEAIAYHIAASIGKQAQELPRIVFHEITKSAISN ALSSPRKLNIASVNAQQARRLLDRIVGYKLSPLLNLKIQRGLSAGRVQSAALKIVVDRER EILNFKPVEFHSIDAVFKKDLEAELVEFRGEKMEKLSVKNAAQASEIIAALQKDKFSVES IESKSRKTNPYPPFMTSTLQQAASTALGFNPRKTMSLAQSLYEGVNTKNGGAITYMRTDS LNIAKEAIAAARELIEQHFGEKYLPKNPNLYATKSKGAQEAHEAIRPTDLKLTPELAQKT LPRDEYRLYALIYNRFIASQMSPSVSQIQTIIVRGEEGAFKISGRKVEFDGFYKAYGDLD KDKILPSLSAGDAMSLQSLSSQQHFTEPPARYSEASLIKKLESLGIGRPSTYAPTISLLT ARNYVNIEQKHLVPSEIAFKITEMLEQNFKNIVDSEFTSKMEEKLDDIAENKADWQQILA DFYYPFMDEIAKGKTSIASQKLAEKIGEACPNCGGELLKRQGRFGEFIACSNYPKCKYSR NADASAEGASEEKAAPEVLDEKCPQCGKNLIKRKGRYGEFIACEGYPKCKYSRKIEGAAK EKKPLLSTGVKCPSCGTGEIVERFSRRGKFYGCTNYPKCGFVSNYAPIARTCPQCGNSYM LRKELKKGNFAECPQCKLKEEID >gi|257442272|gb|ACYG01000025.1| GENE 47 51438 - 52646 886 402 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1550 NR:ns ## KEGG: CHAB381_1550 # Name: not_defined # Def: phosphodiesterase # Organism: C.hominis_BAA-381 # Pathway: not_defined # 3 108 4 102 180 104 47.0 6e-21 MIIGVISDSHPETEVAASAIEWLLARGADLLVHAEGIVAIETLRLLRQSGKPYFAVLGNN DEALTEFKNEFNLRSEPFCTEFAGLRLKIMHHPFYLFDEEPAAQNEADGLNLDADLGAGA DRAVNFRRDFGADPVKNSSFNDEVSYGTNSGSNCRADRREILISNSKTADRAANLDANSN GADDEILNGTCRADENFKNIRSASANFKSGQSASLNVSLGLNAGADMNSNANLDLSLDAD LASSPNADLNSNVNANLADNTSPDMKSKASSSTDCAVNLTAPSLSANLSTPNSCVNLAAL NLGSNLTASSDPNTSDESKNRDPCGCGADKISTIKIYGHTHFFAAAVDKNGTLVLNPGEI CGRKKRLFEFAYIVAQGGKFRVFHVCAAPEKILKWREREIKL >gi|257442272|gb|ACYG01000025.1| GENE 48 52619 - 53782 1255 387 aa, chain + ## HITS:1 COG:Cj1684c KEGG:ns NR:ns ## COG: Cj1684c COG0475 # Protein_GI_number: 15792987 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Campylobacter jejuni # 7 383 9 386 391 273 46.0 4e-73 MARTRDKTMNEIYVLIALSFLTFASPFLASLARIPLSPMEIMLGIIAANLGLLPPSATFD LAAQIGFCYLMFLAGCEVDFRALLTMPRKILRLILIFLALLYILSALAVWIFELPQMLII AAPLMSVGLLSALYKEYGKDQAWLNLAMPAGVIGELISIAALTVGGIYLKNGFGVEMALH IGALLGFSVAALAVFKGLEILFWWFPALKTVIMPKYDKNEKDVRFAMALFCLICAGVMLL GLEVVIGAFIAGTFLPTFFSHKDDLIEKLSSFGFGFLVPIFFIHTGAVIKLEALLMPGVM SFAASLAALMFGIRLLASATFLSTLGRKGAVLFALSLSMPLTLVIATATLFYSTAAISQE IYFAMIIASLMEALASMILINFIYKKF >gi|257442272|gb|ACYG01000025.1| GENE 49 53901 - 54350 345 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460277|ref|ZP_05625380.1| ## NR: gi|257460277|ref|ZP_05625380.1| hypothetical protein CAMGR0001_0073 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0073 [Campylobacter gracilis RM3268] # 1 149 1 149 149 287 100.0 2e-76 MAFENAIITKEDDEKYGLSGIYYKYNPYYETFINELDWTIDRNADCWLMPVYSFPDPDYD HASLAKGIWILYHKGEIIEVTLDYIFDEGKKLHRIWQLLKLNPKSTNALSEKDIVVLLFK ILKVYGYAGTWQKENYTMELQDLTNRNAK >gi|257442272|gb|ACYG01000025.1| GENE 50 54380 - 54829 287 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460278|ref|ZP_05625381.1| ## NR: gi|257460278|ref|ZP_05625381.1| hypothetical protein CAMGR0001_0074 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0074 [Campylobacter gracilis RM3268] # 1 149 1 149 149 289 100.0 5e-77 MAFENAIITKEDDEKYGLSALYGKYNYGAKLPNLNFTIDRQLDCWLLKIYSFPDPNYDRA LLAKAVWILYCDSTQIYVVLDQKVADTRSDEFHRIWELLDLKPNHTQSLNKQDILCLLKE ILEVYGDCDLWKSEPNYTMELQDLTDRKI >gi|257442272|gb|ACYG01000025.1| GENE 51 55231 - 56085 626 284 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165357|ref|YP_001467327.1| ribosomal protein S1 [Campylobacter concisus 13826] # 1 284 1 283 283 245 46 5e-64 MQLKKIFFPIGGGEELAERIHGALLVNKFFGTHINIMACQLDPKMIYNVRMTLKGGVLME EFLKSAGDEMQAEREVIKAIFDAECAKLGLDQNDDDHVPNSAALRHMVGIRSELVEKYSK YCDLVLVSVPPTGSITGTFEAAVTKSGKPCIVIPRKLQEFKADKILVSLTGTAASARALD NWLELLQRAKSITVITANHYLQDDLAETKRRISDYLALHSIKIDVFEALNVEGKIPGQVL LEYADAGDFDLIVAGLHSDSGIKEIFLGGASKYFLQKTKIPVLM >gi|257442272|gb|ACYG01000025.1| GENE 52 56107 - 58221 2839 704 aa, chain - ## HITS:1 COG:Cj1253 KEGG:ns NR:ns ## COG: Cj1253 COG1185 # Protein_GI_number: 15792577 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) # Organism: Campylobacter jejuni # 1 703 1 717 719 881 64.0 0 MQCKIEVNGNTEIFDINKVAKQAAGAALLRVKNTVVLATVAREETQVQEDFLPLTVQYIE KMYAAGRIPGGYIKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVYVLSADPEVD LQVVALNAASAALYLSDIPIKAPVCGVRIGYENGNFILNPSNSTLKASVLDLYVAGVGDE LLMIEMRSLPQINGDAQQMNEFSEDLMVDAIDFAAKAISAGSNAYEEAFLPLKKPDASLE YKPEIEDEDIADFIDANYKDAVKAAINQMAKSERATELNKIVDQILATEVAAQNEWSKEV ISSVIGKYKRGIIRTQIIEDRRRADGRALDEVRPISIETNILPCAHGSCLFTRGQTQALV VTTLGGDSDAQLSDSLTQLEPISERFMFNYNFPGFCVGEASPLKSPGRRELGHGNLAKRA LYPSINLNSPQSIRVVSEILESNGSSSMASVCGGALSLRAAGVPTLKLVAGVAMGLIFEG EKHAVLTDIMGLEDHDGDMDFKVAGTYEGITALQMDIKLGGISLEVLKEALAQARQARAH ILGLMEQADAAIVINRDVLPKLEIFNVEASKIPDIIGQGGKVIKEITESFGVNIDLDREK GEVKIQGAKASGVSGAKEKILSIVSNSRDFRKPRGERKEVKFQIGEEFDGVVQSVLDFGT FISLRDGVDGLLRAKFITTPYKAGDVVRVRVTDQKGTKISLELA >gi|257442272|gb|ACYG01000025.1| GENE 53 58205 - 58924 797 239 aa, chain - ## HITS:1 COG:jhp1137 KEGG:ns NR:ns ## COG: jhp1137 COG1926 # Protein_GI_number: 15612202 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Helicobacter pylori J99 # 7 215 14 222 234 151 40.0 9e-37 MTPRAELMFENQIDAAMKLAEILPATVIKNENFLIIAQSLESLPIANHLALKLGLAYEFL FTEPVLAPNNPECAIACVSETQEIVMVDELVRSFGISLDYVYGQANRLYEEKILKNMYKF RKGELLGNLEKKNVILVDEGCESGLTALTCIKTLVSLNAKAIFYATPVIGSDNADEIAML VDGIYAVHKIRDFVNVDFYYKEKTLSSAEEIMQILNKCPLYLPFHETNKNKEKINAVQN >gi|257442272|gb|ACYG01000025.1| GENE 54 58924 - 61182 2239 752 aa, chain - ## HITS:1 COG:Cj1252 KEGG:ns NR:ns ## COG: Cj1252 COG1452 # Protein_GI_number: 15792576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Campylobacter jejuni # 14 744 5 675 682 449 37.0 1e-125 MKKSKKFKILALSFSALLASSASAKVQDVELIADNVEKNGFLTEASGNVTVYSQDYFITA DRATYDEQNGIIELFGNVNAMRGSSETTRAQHVKIDLKNDKQQADVNFMMDKDSELWMQN DASCSDSEYYRVEGSSVSSCNVTDPDWRIKFSSGMLNKESKFLHLFNPRFYVGDVPVLYL PYFGFPTDRTRRTGLLPPEAGYISKEGIYYKQPIYFAPYDSWDFQLDPQVRTRRGFGVYG TFRFTESPYSYGEIRGGVFDNFSRAQKRLEYKNERHHGFEVQYDRSKLVTYLLDGDLREN LWIDFTQLNDLEYYDLKQKGGLSDDADNSLVTSRLNYYLTGDEHYFGAYGRYYIDTSKLN ADNTFRNEDTVQELPTLQYHKFSNDLGLPNLIYSLDAKARNYTRWEGATARQYEFDVPIS ISTPLLADYLNFAFTERVYMTNIDWHDKFYYANGDLGEDKSTFYANQYTELSLYTDVARA YDSLYHTMSWRADFRIPSWQQGDIEDRILKYHQYKYDLARGAVDRSRLGNLQDSLYWEDN FLSELSDEYTHENAALSMTQFFYNEDGRKFLRHSVKQRYDFDDHEFDDLEHRIDAYFANG LNIGNRFTYSHKYKSFDKVYTYANYSNEDFSFGLSHAYEYEKLSMEPKRYTKDNYGIVNA SVNLPRNNKIFGRWDYDLERSYSKMWRVGLSHTRKCWNYSFVYQEDIEPKNTSMTGYSKA SKERGIYFLVNFYPFGGVGYDFSVDSEYGSEK >gi|257442272|gb|ACYG01000025.1| GENE 55 61169 - 61606 348 145 aa, chain - ## HITS:1 COG:Cj1251 KEGG:ns NR:ns ## COG: Cj1251 COG1714 # Protein_GI_number: 15792575 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Campylobacter jejuni # 3 142 16 149 150 70 36.0 8e-13 MIVASLSKRVIAFSIDEAVSVTLFVVVLFAIDEPELVAAAQSGSNLEVQKIASKFILHYA IIKFLYHMIFVYLYGASLGKLAVKIYCVRVDGSSMDIATAAIRAAVRVISETIFYMGFLV AFFTNSRQSLHDMAAKTLVVEIEKE >gi|257442272|gb|ACYG01000025.1| GENE 56 61603 - 62859 1367 418 aa, chain - ## HITS:1 COG:Cj1250 KEGG:ns NR:ns ## COG: Cj1250 COG0151 # Protein_GI_number: 15792574 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Campylobacter jejuni # 1 415 1 416 416 492 60.0 1e-139 MNILIIGGGGREYAIGLRLREDKNVLNLYFAPGNGATKAFGKNLDLKDFNELALFAKNND VALTVVGAEEPLTKGIVDIFKAQGLAIFGPSAAAAKLEGSKAYMKDFLARNHIKTAKFLS SDDLSEISKFIDTLNGRIVVKADGLCAGKGVIIANSKDEAKKAAADMLSGESFGEAGKRV VVEEFLDGYELSFFAICDGENFVSLPVAQDHKKLLDGDLGPNTGGMGAYAPSPLADAALI KRVESEIVAPTLKGMKQQGAPFCGVLFVGLMIVGGEPYVLEYNVRFGDPECEVLMPLIDG NLSEILYNAAVGKLSSISLKERFAVGVVIASERYPYGSSQPALIEVGEIPAGAHICYAGV SERERQIYASGGRVLVSVGVAQSLKQARDAAYALCENIKFSGAQYRRDIAHQALRDKI >gi|257442272|gb|ACYG01000025.1| GENE 57 63103 - 63747 475 214 aa, chain - ## HITS:1 COG:jhp1145 KEGG:ns NR:ns ## COG: jhp1145 COG1587 # Protein_GI_number: 15612210 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Helicobacter pylori J99 # 39 212 36 219 223 119 40.0 6e-27 MEGVLIYLVSNTKFDHPQVRQLAVCEIKFLKFSLPAQASALIFTSKNAVAAIKFNEISPD LDTPVYAIGEPCAAAAREFGFRDIYTARHGHGNEFAAEIAPFLQGAYALYLRARETVSKL EQILSSAGVRLQSMIAYENSILSLPAAAKPPQGSTLIFTSPKNVRGFTANFGWDGSYKAI CIGKTTASFLSEFCEPIICERRSIKSCVDLALLP >gi|257442272|gb|ACYG01000025.1| GENE 58 64350 - 65723 1631 457 aa, chain - ## HITS:1 COG:Cj0931c KEGG:ns NR:ns ## COG: Cj0931c COG0165 # Protein_GI_number: 15792260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Campylobacter jejuni # 1 456 5 458 460 537 58.0 1e-152 MWEGRFSEASSALLEEFNASIGFDRALWQEDIAGSKAHARMLGACGILKADESEKIVAGL DAVFEEIKSGKFEFKTADEDIHMAVEKRLSELIGSDLGGRLHTARSRNDQVALDFRLYVL KSGSAIAEKIRELVEALRDIASEHTGTLMPGYTHLQHAQPVSLAYHLLAYAFMFRRDYER FASSRERNNLCPLGSAALAGTPHPINRGLVARELGFAGVTPNAMDSVSDRDFALEILFNV SVLMTHASRLCEELILWSSQEFGFITISDAYSTGSSIMPQKKNPDVAELIRGKTGRVNGN LVALLTVMKGLPLAYNKDMQEDKEGVFDSVATALASLEILKQMLKTAKFNEQNMLAMTRR GHLTATDLADFLVREKNVPFRRAHFITGKAVAYAENLGLDLSELNAQQLASVDESLGGDA VKFLDLNASKEARKSQGGTANESVMAQIEILNEWLKG >gi|257442272|gb|ACYG01000025.1| GENE 59 65916 - 66545 600 209 aa, chain - ## HITS:1 COG:BS_yfkO KEGG:ns NR:ns ## COG: BS_yfkO COG0778 # Protein_GI_number: 16077850 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Bacillus subtilis # 4 208 9 221 221 149 40.0 3e-36 MTHLEIMKFRHACKIFDENKKIGKANFDAILQAGILAPSSTGLEQWDFLVVQKKALREQI REKSWNQPQITSCSHLVVILAKIKDIKLGSDYIERMITRKKDEAPKYIGDRHKFYQDFLS GYFHNDDEELFNWSHAQCMFAALAMMNEAASRGIDSCPMEGFDRAALNEILGIDWNDRRV ALLVPFGYRVNPQPQKIRRSMDDVVKWIE >gi|257442272|gb|ACYG01000025.1| GENE 60 66555 - 67745 1074 396 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1784 NR:ns ## KEGG: CHAB381_1784 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 191 396 26 228 228 123 38.0 2e-26 MRKIFLLILGLCAFLNAENLNGVNSNATKSSIVVVKEQNSTDLAIKDPKTGAQSPNAKKQ AVMKPETSKSPTVAMQKSAAEANSSVKASAAKKAVSAQLSQTEKKASVPKAGIGAPSQVI KTELNSSAQPSVAMLPPPDELPIVPEVSEPNSTIVQNFKAAQNSTAQNSTVQNSTAQQNA QSAPQNSNPAQSSAATPQNIPAPKNFTQQTFALPSDALTIESLIVRYRDDDGALHEKIVD INRSIDWHDDFVLSASAKPALHRALDVSVTSTDPNLQKQVSQSGITPSFAPRLELPLETL KFDDGLKFVIRKDSVQLITADDFKSSDANASGALEAEFWRQEIPLSGASFAVNIGGFSDI NVTKEDGYYRIGVRSHEGNLSIRRKDGGYLIYKNSN >gi|257442272|gb|ACYG01000025.1| GENE 61 67742 - 68569 569 275 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1785 NR:ns ## KEGG: CHAB381_1785 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 202 275 22 95 95 85 55.0 3e-15 MFFKKRSKRGLKGGAQRTYADGADYTDTQGRYSDIDFDEDDFFDDGEFCSDENFSGGFSE VGAGFCKNRNGTSHGVDETGSASDAGGGGSNLSSKSSTTSGNYEGSVQADAGFYSAEFIG GGDLKNAELYAKENHFPNDADFAAQSVERGSQGTSFAAQDINPATQGFSFAPQNADPAAK KALKKRKNLKERLNFINPFSPLKQIFAALALIVCVVFAGIFVGDVLFGKRSFEVLRQLQK EKAFLFTDVERLKEENAELQKLYLERRSLDPDLKK >gi|257442272|gb|ACYG01000025.1| GENE 62 68571 - 69824 1632 417 aa, chain - ## HITS:1 COG:Cj1672c KEGG:ns NR:ns ## COG: Cj1672c COG0148 # Protein_GI_number: 15792976 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Campylobacter jejuni # 2 417 1 414 414 589 72.0 1e-168 MMIYIEDVYAIEVLDSRGNPTVKATVALSDGTVASAIVPSGASTGKREALELRDGGDRYC GKGVLKAVENVNSQIAEAVIGLDAFDQKALDDEMRELDGTDNYSNLGANAVLGVSMAVAR AAAKSLDVPLYRYLGGANASVLPVPMFNIINGGAHANNSVDFQEFMIMPFGFDKFSDALR AATEIYHTLKGLLNAAGHSTAVGDEGGFAPNLNDNEEPIKLIMQAIEKAGYKAGEQIKLA LDVAASELYENGKYKLEGKEFSSEELIERYAQLCEKYPIFSIEDGLSEDDWAGWAKLTSK LGSKVQLVGDDLFVTNEKILREGIAKGVGNAILIKPNQIGTVSQTMQTIRLAQRKGYRCV MSHRSGESEDSFIADFAVAMNTGQIKTGATSRSERNAKYNRLLEIERETDEFLGSRI >gi|257442272|gb|ACYG01000025.1| GENE 63 69821 - 70864 1383 347 aa, chain - ## HITS:1 COG:Cj1673c KEGG:ns NR:ns ## COG: Cj1673c COG0468 # Protein_GI_number: 15792977 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Campylobacter jejuni # 1 340 1 340 343 524 81.0 1e-148 MDEGKKKTLDAALKSIDKAFGKGTLVRLGDKQVEPIDAISTGSVGLDIALGIGGVPKGRI IEVYGPESSGKTTLTLHIIAECQKAGGICAFVDAEHALDVKYASNLGVDTDNLYVSQPDF GEQALDIVETLAKSGAIDLIVVDSVAALTPKNEIEGDMGDQHVGLQARLMSQALRKLAGV VHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFYASVRIDIRKIATLKQNEESIGN RAKVKVVKNKVAPPFKIAEFDIMFGKGISKVGELIDYGVKLDIIDKSGAWFSYGDTKLGQ GRENAKIYLENNPAVAEEITAKIREQMGSVNFSADADDEENLQSGDE >gi|257442272|gb|ACYG01000025.1| GENE 64 71213 - 72052 894 279 aa, chain + ## HITS:1 COG:Cj1674 KEGG:ns NR:ns ## COG: Cj1674 COG2107 # Protein_GI_number: 15792978 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Campylobacter jejuni # 1 269 17 284 286 355 66.0 4e-98 MYKAIDFGWVSSKNLKFSATALDIQTLNDEALKGTYEATAISFALYPLICDEYALLRTAV SFGEGYGPKLVKKKGAVLKRNFKVALSGKHTTNALLFRMAYPQARIVYKNFLDIEGAVLS GEVDAGVLIHESILDFSDELCVEREIWDIWSELAGENLPLPLGGMAVRRSLPITDATECE RVLTEGVRIATAHKPFLSHMLMERNLIRVDDAKLEKYLSLYANEASIELSQVQIRAVDRL FELGYERGFYPAPLSAQENFIPREYNEIRFADCGGQNPM >gi|257442272|gb|ACYG01000025.1| GENE 65 72661 - 73452 760 263 aa, chain + ## HITS:1 COG:Cj1676 KEGG:ns NR:ns ## COG: Cj1676 COG0812 # Protein_GI_number: 15792980 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Campylobacter jejuni # 6 263 3 258 258 226 49.0 4e-59 MKTKQIDFSKYTSVRIGGSFAVQILKDDTDFAEFESIAGGAIIGGGNNLLISPAPPHLAM LSEEFDRISLSGDVLSIGAATKSGKIYNFAKKQGLGGFEFLRNIPGTLGGLIKMNAGLAG ASISDSLLAVRLTRGWVERERISFGYRRSGIEEPILGAEFKISRGFDAELAADFTAKRAN QPKGASFGSCFKNPPGDAAGRLIEAAGLKGYRVGGAKFSEQHANFIINFGGASFEDMMSL IDLARERVLQRFGVALELEVKIL >gi|257442272|gb|ACYG01000025.1| GENE 66 73797 - 74510 948 237 aa, chain + ## HITS:1 COG:VCA0100 KEGG:ns NR:ns ## COG: VCA0100 COG0607 # Protein_GI_number: 15600871 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Vibrio cholerae # 52 129 41 116 123 65 41.0 1e-10 MKFISHKILKSAVLLAALGSFATCGAEMQQPSGYAISGAALSAIEEDNRAKENYLVIDVR SADEYAAGHIKHAINIPLGELESRLDEINAYKDKNVVLYCNTGNRSSKALDLLKQKGFSV LMNATGVKQYDYELYKVGSINAEGFLKIANDPNVLIIDARQKQDYDAGHMKGAINIPDGE PLENYKDVLKANKDKKMITHCYSGNRSAKLAKALNERGYNVTNLLDGTKEYNYELVK >gi|257442272|gb|ACYG01000025.1| GENE 67 75123 - 75911 710 262 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 17 262 30 275 279 134 33.0 2e-31 MKVFVLAALLLGFLSANSLDQIKKDRLVRIGVYNDQPPFSALVDGKYRGFEIALGEKLGK EIFGDNPGKVKFIPITASRRISALQRNEADMVIATFTPTPARAKKVDFSEPYFKVQVGVL AKKDENVTSFDQLRKKRIFVIKHSPIHNFLRKAGFKKNLNFCASSAKCYRAFKRAKNAVH VDDNLILHAYAIIDNKTQVVLDGLGKQTYNAIAVQKGNNALLELINTSLAGLKKDGFLDK TFDDTLEIFYHGTIDKKEFLVE >gi|257442272|gb|ACYG01000025.1| GENE 68 76325 - 77326 1176 333 aa, chain - ## HITS:1 COG:Cj0239c_1 KEGG:ns NR:ns ## COG: Cj0239c_1 COG0822 # Protein_GI_number: 15791611 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Campylobacter jejuni # 1 160 1 160 160 278 81.0 9e-75 MAKNSLINGSIWEQYSQKVQDRMNNPRYMGEITEEEAKARGGKLVVADFGAESCGDAVRL YWLIDPKTDRILDAKFKSFGCGTAIASSDTMAELCIGKTVDQAVKITNLDVEHAMRDNPD EPAVPPQKMHCSVMAYDVIKQAAANYKGVDPAHFEDEIIVCDCARVSLGTIKEVIRLNDL HTVEEITQYTKAGAFCKSCVRPGGHEEKDYYLVDILKQTREEMERERLQAQAEASAATSA KAGAEMSFEQLNLIGKFKAVEGVLDEDIRPMLQMDGGNLDVIDIRPADDGKTDIYIRYLG ACSGCASGASGTLYAIENVLQENLSPNIRVMPI >gi|257442272|gb|ACYG01000025.1| GENE 69 77337 - 78530 1359 397 aa, chain - ## HITS:1 COG:Cj0240c KEGG:ns NR:ns ## COG: Cj0240c COG1104 # Protein_GI_number: 15791612 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Campylobacter jejuni # 3 395 2 393 393 533 66.0 1e-151 MQRVYLDNNATTMVDPEVFDEMKPFFCDKYGNPNSLHSFGSETHPALRAAMDRLYAGLGA ADADDIVITSCATESNNWVLKGIYYDKILTGEKDNIVISSVEHPAISATCAFLEKICGVK ITRLGVDKNGLIDLDELSEKINDKTALVSVMWANNETGTIFPVKKIAQIAHEHGALYHAD AVQAIGKIKVNVRDADVDFLSLSGHKFHAPKGVGALYIKDSKPLTSLLHGGEQMGGRRSG TLNVAGIVGLGKALELANKFMDFERTQVSRLRDKLEDALLQIPNVSVVGDRSIRVPNTIL ASIQGVEGEAMLWDLNKAGIAASTGSACASEALENNPIMEAIGADKELAHTALRLSLSRF TTEAEIDYAIEHIGKAIARLRGISSTFAYAPQGYEKK >gi|257442272|gb|ACYG01000025.1| GENE 70 78642 - 79226 609 194 aa, chain - ## HITS:1 COG:Cj0194 KEGG:ns NR:ns ## COG: Cj0194 COG0302 # Protein_GI_number: 15791581 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Campylobacter jejuni # 6 194 2 190 190 287 75.0 1e-77 MDEKSRAKFESCVSQMLEILGEDPKRDGLAKTPGRVAKAYEFLTSGYELDPKEILNDALF ESSNNEMVLIKDIEFYSLCEHHLLPIIGRAHVAYIPNKKVVGLSKIPRMVNIFARRLQIQ EQLTEQIASAIQEVIHPLGVGVVLQARHMCMEMRGVQKINSTTTTSALRGLFISRNDTRK EFFDLINSPKTFGF >gi|257442272|gb|ACYG01000025.1| GENE 71 79413 - 79943 713 176 aa, chain + ## HITS:1 COG:PA0151 KEGG:ns NR:ns ## COG: PA0151 COG1629 # Protein_GI_number: 15595349 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 28 176 109 258 795 143 50.0 1e-34 MKFKMSFGAALALFSFACAEQNAAANSASGENLGDIEVVEWANNDDGYRAVRSEIGKTTK RILEIPQTVNVVTQQHLKDKKPDTLAESLQNVSGISYANTTGNIFDAIIKRGFGEGRDGS IMRNGVPGAVIHNYNKTIQSVEVLKGPASMLYGAQQPGGVINMVTKKPQYEFINEL >gi|257442272|gb|ACYG01000025.1| GENE 72 80166 - 81563 1194 465 aa, chain + ## HITS:1 COG:HI1466m KEGG:ns NR:ns ## COG: HI1466m COG1629 # Protein_GI_number: 16273651 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Haemophilus influenzae # 2 465 254 734 734 266 34.0 8e-71 MDRGAFLVPSTGKIYGSGKVRFDEPVNKLQSKLDTVDFGFEKEFNEDWILKGAYAFSRSK HEYGYVRPNNPFTPQGLTGTTRSYNYYDNFIHRTHAASVTLNGKFETGPLKHDVLFGTDY KNYYRYRPGALKGTAGRINMLTGQTASGAVLTNDREPKIQYQKLRTIGLYTQDNINLTDE LILSLGVRREFYDQVAKQSWRGPNSTDQKKAATTYQGGLLYLLSPQWSVYTNYAQSFTPQ MSIGEAIGGDLKPEEGKSLEFGTKFQNDRVTAGAAVFNIDKRNILRTVNNISETIGKARS RGFELDINGRVTQGLSMSASYAYTKTRVREDDGAFAVLIGKPLEATPKHQASLFANYDFA HLGAKGLRLGGGARYFGSWYTYYMRTNLPNVPAGTAFKLPHAVVYDAFVSYDTKISGYDT NFSFNVKNLTDKKYYTSSSTGTTTSVIPIQMGYARQFMFNVSVKF >gi|257442272|gb|ACYG01000025.1| GENE 73 81721 - 83034 1899 437 aa, chain + ## HITS:1 COG:Cj0193c KEGG:ns NR:ns ## COG: Cj0193c COG0544 # Protein_GI_number: 15791580 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Campylobacter jejuni # 1 426 1 426 444 404 58.0 1e-112 MEVKAKMKDAANAVAASKIEAKQIAAKVEELAKKASKQLRIDGFRQGKVPTAVVLKRYGK QLEGDAKQELLKNMIDESLKILKKKQDEILSEPVFSKFDEKNGDIDVEIEISFRPEVSVE GYEELIPKFSSPRVTQKEIDEKVAEFLQMIAPLSKTNKKILAKDDFAKFDFEGFVDGKPF DGGKAQDYVLQIGSNQFIPGFEDGMIGLRVGEERDVAVKFPQDYGAKSLAGKDAIFKVKL HEIQAKKPAKELGEEELKQALPGEKEPSKEKFEARIKERIKNDKLQKLINEDLKPKFADA LAEKFNFALPKAIVEQEINLQFNNAWSGFSKEQIEEFKNNKDALDKKREEFRKAAENSVK LTFLIDELAKKRNIDVSDQELVQAVYMEAYTYGANPKEHLDRYRNNGMLPAVKMALIEEK LFNDIFSKQGKKEEKGE >gi|257442272|gb|ACYG01000025.1| GENE 74 83035 - 83619 784 194 aa, chain + ## HITS:1 COG:Cj0192c KEGG:ns NR:ns ## COG: Cj0192c COG0740 # Protein_GI_number: 15791579 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Campylobacter jejuni # 1 194 1 194 194 326 82.0 1e-89 MVIPYVIEQTSRGERSYDIYSRLLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIY LYINSPGGVVTSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLSCGAKGKRYALPNSRIM IHQPLGGAQGQATDIEIQAKEILRMKEILNGILSQNSGKDLAQVEKDTDRDFFMSAEDAV QYGLIDQVLQKSFK >gi|257442272|gb|ACYG01000025.1| GENE 75 83620 - 84138 604 172 aa, chain + ## HITS:1 COG:jhp0729 KEGG:ns NR:ns ## COG: jhp0729 COG0242 # Protein_GI_number: 15611796 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Helicobacter pylori J99 # 2 172 3 172 174 173 53.0 2e-43 MILNVLTYPNKKLYQRSIEVVKFDAALGELLDDMYETMIAKNGIGLAAIQVGRPVRALII NLANEEKIQDKKDLIEIINPQILKKEGEVVFQEGCLSVPGFYEDVTRAEFITVQFQDRAG NTHEMDASELLAVCIQHEMDHLDGHLFIERIGYNKRKKFDKEFKKSLKEKSK >gi|257442272|gb|ACYG01000025.1| GENE 76 84135 - 85652 1241 505 aa, chain + ## HITS:1 COG:Cj0190c KEGG:ns NR:ns ## COG: Cj0190c COG0606 # Protein_GI_number: 15791577 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Campylobacter jejuni # 1 503 1 501 501 611 62.0 1e-174 MKSLKCAAFTDALIPVEVESTFVRGLPGFNIVGLAGATIKESESRVKAALMSLNFKFPAS KIIINLSPSDTPKNGSHFDLAIALLIALQKERIDGDFFVFGELGLDGSLKSTASLFSILL FLSTKVKRAKILVPQSIALKACTIPNYDVYAVDSLSDAVRFFLDEEFAASRLMRETHPLF KNVVEIGGQAYVPNRDFSLDFKDVKGQKRAKRASLIAACGMHNILFEGSPGCGKSMCAKR IARILPPQSLGEVLLSCAYESLNNKDVDFSALRPFRSPHHTSTRSSIFGGGSSGAKIGEV ALANGGELFFDELPHFGKQILESLREPLEDNRILISRVNSKVEYQTKFIFVAAQNPCPCG NLFSKNLTCTCSLNDIRRYKNTISAPLLDRIDIYVAMDETGADDRSDVCSEEMADAVLRA FCAQKARGQSELNAKLRDEETKKFCVCESAAREVLQTAITRYDLSQRGVNKTLKLARTIA DLAGAEIIAKAHILEALSFRIRSEI >gi|257442272|gb|ACYG01000025.1| GENE 77 85649 - 87280 1532 543 aa, chain + ## HITS:1 COG:jhp1281_2 KEGG:ns NR:ns ## COG: jhp1281_2 COG0063 # Protein_GI_number: 15612346 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Helicobacter pylori J99 # 276 543 1 271 271 205 47.0 2e-52 MKKIFFSTAELDARASAKFGLGEQILMENAACKIEGEIRKRLKKGSRILALCGGGNNGAD AMAALRKLSGDFSCTALCVLENRSAAGKFQADAARAAGVKLIDISSVKDACEHVEEASSK DACAHESVDGSSLKGTGASEPRGELESLSGADISCDGDKLSAKFEIAGRSGEHGNLGNEY GEPSILHDEIINADCIIDGIFGSGLNKALSSEICEILSLANSSKSLKIAVDIPSGIDKFG RILGGAFCADLTIAMGALKLALFSDGAKDYVGQIKVANLGISRSNFEGRSEYFLLQKSDL KLPLRRKQNTNKGDFGHTYVVSGQMSGAAQMAALAAHAIGSGLVSVVSEGPLNLSPILMQ KSSFDAARVVVCGCGLGERKIDLAALRDKSCVIDADLCYESEILSLLNANSNLILTPHPK EFCSLLKIAGIADLSVSELQGRRFELARAWSEKFSGVLVLKGANTLIAQAGITYVCDKGS AALAKGGSGDVLAGLIGGLLAQSYSPLQASICGVLAHALAARAFAKNSYALNPLDLIEEV KWL >gi|257442272|gb|ACYG01000025.1| GENE 78 87271 - 87849 811 192 aa, chain + ## HITS:1 COG:Cj0187c KEGG:ns NR:ns ## COG: Cj0187c COG0299 # Protein_GI_number: 15791574 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Campylobacter jejuni # 5 189 4 187 188 251 69.0 8e-67 MAVKKLAVLFSGGGSNLEAILQKLHGKTFGETKIEVVLTLSNKADAGGIAKAAKFGLQSV ILNHKDFASREEFDAALVREIEKSGAELTVLAGFMRILTPVFTSRVRAINLHPSLLPLFK GAHAIEQSFESDMKVGGVSVHWVSEELDGGAIIAQRAFEKSAGMSFEAYETKIHEIEHEL LPQVVVEILCQS >gi|257442272|gb|ACYG01000025.1| GENE 79 87989 - 88561 657 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257459891|ref|ZP_05624997.1| ## NR: gi|257459891|ref|ZP_05624997.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 190 1 188 342 73 32.0 8e-12 MTANEPEKLRLGILDEAEQHKGTAFSIIVLAVLASALWLFFNFRDQNAAMILCWIIVAFS CGNISYRVVNKDANIVRVFIFCILLWILAKGIELKNDTLRFVIALVTICLSLFNIAGAAL EQIKHNRSKKFVRAFKHQYITPYIASLGYRYEISGSFRPAYLRASGLFVDGISYFDCEDK ISGVYDGVFF >gi|257442272|gb|ACYG01000025.1| GENE 80 88542 - 89027 317 161 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1736 NR:ns ## KEGG: CHAB381_1736 # Name: not_defined # Def: putative galanin # Organism: C.hominis_BAA-381 # Pathway: not_defined # 23 159 178 313 315 102 42.0 7e-21 MTEYFFSFADVCVTHTDERRSSRGIFFYAEFKKRVNSVAVILPSLSARPTLGGLKKIVMD DSEFSSAFSVYSADAVSAMYALAPAFMRRLLRFRSGAGGPISLSFSGRNVYIFIRTGYDS FEPSVDRSVLSFDPASFIKHELLFFLSIVKSLKLNENIWQD >gi|257442272|gb|ACYG01000025.1| GENE 81 89706 - 89909 260 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|223038813|ref|ZP_03609105.1| ## NR: gi|223038813|ref|ZP_03609105.1| hypothetical protein CAMRE0001_1532 [Campylobacter rectus RM3267] hypothetical protein CAMRE0001_1532 [Campylobacter rectus RM3267] # 2 67 269 334 338 103 80.0 4e-21 MKLFFPTQKFKKKLADGSIIFSIDFTQDMEILPFIKKWLPDIEILEPKDLRETFKEQLKA ALDILSE >gi|257442272|gb|ACYG01000025.1| GENE 82 89984 - 90706 627 240 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460321|ref|ZP_05625424.1| ## NR: gi|257460321|ref|ZP_05625424.1| hypothetical protein CAMGR0001_0117 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0117 [Campylobacter gracilis RM3268] # 1 240 1 240 240 426 100.0 1e-118 MSSDAENKTIVIFEILKKLVAKQEIYLTDTELLDELRIKERTLRRYMGEIDKLFPYAFRI ESKLIGHGKRPVKVLRVYDKNKDIIGVLKCLLEYGNDLGWLISLLNDNDPRLFNDLDKHE KEKVSKQLKEDSDIFLFRTNPLEVLQDELSKRYLSELRNAVKNKECRNIKYKYIGEMENL IDAKCLKIVFTDSNWYLAIEDADGNFRLLRVAFIVSLSKSSKKYEGKILKEYETYFNKIL >gi|257442272|gb|ACYG01000025.1| GENE 83 90706 - 91086 352 126 aa, chain - ## HITS:1 COG:no KEGG:MJ_1673 NR:ns ## KEGG: MJ_1673 # Name: not_defined # Def: hypothetical protein # Organism: M.jannaschii # Pathway: not_defined # 1 123 1 126 129 108 44.0 6e-23 MKILFTLINHTLTSEQEEDARKNLNVDKFINIADARWSDIDPSEKSVIKFVEAYKDKLKK QAKAGDVLLVQGDFGATYNMIRFAKNMGLIAVYATTNRIVSEQVENGKVVIKREFKHARF REYEEL >gi|257442272|gb|ACYG01000025.1| GENE 84 91083 - 92330 682 415 aa, chain - ## HITS:1 COG:no KEGG:Selin_1039 NR:ns ## KEGG: Selin_1039 # Name: not_defined # Def: CRISPR-associated protein DxTHG motif protein # Organism: D.indicum # Pathway: not_defined # 3 412 6 416 435 230 33.0 1e-58 MKVVTILGIGRAKEKFEDRPVYRYDDKLGSFYSLKKQRYTNMLPLLIDNFGEQNIIPIFT KDAKDTNIEVLKKEFDIEYCEFFKDENFIDSDKDFYKILRIINDVTSNNEEYIIDLTHGF RHIPILATISLISQSLNNTDKIKHIFFAKEMEPYKDYEIIDLKEYLELANMSYVLETFNH NYTVSLVSKFKNKNFCNLISRLSTISNHILSNSLKALNKDVDKILSDIDFILKNEQIETF KGSLEDIQRHIRELQDIGKEKDSIKFYRMSKILNSKGYLLNAITLLFEAIGYYCAESFEC FGDDIKAHINNFKNSRKFNAYDLTHESRTIVKKMGLRNGAYLTSIAVHDNIQKKLESIKT LGAFRDFIKDAEKLRNNLAHGNANERIEDSKQELSRLLDKYNSFCIQQNILGNKI >gi|257442272|gb|ACYG01000025.1| GENE 85 92334 - 93128 689 264 aa, chain - ## HITS:1 COG:no KEGG:Theam_0623 NR:ns ## KEGG: Theam_0623 # Name: not_defined # Def: hypothetical protein # Organism: T.ammonificans # Pathway: not_defined # 38 263 44 273 273 100 32.0 6e-20 MTHYEKRNFQKIIVSLLGSSLLERKAFFIIAGVLLFFAWLPDGMSSLLDKIFGGEILKWS AKDGTMLVQILGSIAIFCAIKHIIPKSVPNVDIDINDRPKRAKVLVLFLSENNSGIEEIL KFKTIDEYGRNNYRMPLKAIDYHKQRLKKIIVACSEKSHGDREKFLKCVQNLFGKELADM TNVRYIKNFEDAKSVYKFLESAYSQLGQEGFIEDDIVFDVTGGQKAISIAGAMFAIPNDR HLQYVSTSDYTVKHYDLTYMQNEE >gi|257442272|gb|ACYG01000025.1| GENE 86 93401 - 93574 200 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460325|ref|ZP_05625428.1| ## NR: gi|257460325|ref|ZP_05625428.1| hypothetical protein CAMGR0001_0121 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0121 [Campylobacter gracilis RM3268] # 1 57 1 57 57 93 100.0 4e-18 MKKIVLSLAAAGVMSGALAQEVPNLANIAPSNYGSYVPTLDFYIKGKDITNSASFAI >gi|257442272|gb|ACYG01000025.1| GENE 87 93853 - 94506 536 217 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460326|ref|ZP_05625429.1| ## NR: gi|257460326|ref|ZP_05625429.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 217 1 217 217 422 100.0 1e-116 MRTLFLVLIALFLIGCVEPDPESYYGRVNRKDEFTTNFQSRRLANELIVLFDMGEKSQYG NDYFDNSLKIADYENDVKLSEVKSFLASKGAAPLRVYERAVKSSGKNKFKRYSGRLNAEV VALVPFDTQFRKAQKNCFDGTSLCLFNEFPLLTETDVEGDMASMMINFVEVKSAFNNYQD GFTPVKIIIHTATYTGAKLNAILSKIPKKAFENNELN >gi|257442272|gb|ACYG01000025.1| GENE 88 94669 - 95274 515 201 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460327|ref|ZP_05625430.1| ## NR: gi|257460327|ref|ZP_05625430.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 201 1 201 201 390 100.0 1e-107 MKILFKVFLLGLIGVMFSGCFIVMPPDKETVMAQQLDVWCILRENKDKERYEESKRKAES FLDKDKYGDRVQIAPRGEYSVSLLDRAFSGDNHPGLYWREYGMVYKPITCDRENKKLNMV VEITPHKVKAQNEKDKMEGDAYTFIDSFKKQTAEALYSSKEIGELMELGSSLDLIFIDYE TRKEIDKSTYDFAGYKAYNEK Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:26:35 2011 Seq name: gi|257442271|gb|ACYG01000026.1| Campylobacter gracilis RM3268 contig00008, whole genome shotgun sequence Length of sequence - 2112 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 511 - 1960 99.0 # EF509169 [D:1..1450] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:29:02 2011 Seq name: gi|257441660|gb|ACYG01000027.1| Campylobacter gracilis RM3268 contig00011, whole genome shotgun sequence Length of sequence - 490237 bp Number of predicted genes - 459, with homology - 455 Number of transcription units - 217, operones - 94 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 322 411 ## COG2011 ABC-type metal ion transport system, permease component - Prom 457 - 516 7.6 2 2 Op 1 . - CDS 587 - 2422 1884 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 3 2 Op 2 . - CDS 2432 - 3421 1106 ## CHAB381_0726 hypothetical protein 4 2 Op 3 . - CDS 3421 - 4269 346 ## 5 2 Op 4 . - CDS 4272 - 6269 2201 ## COG0143 Methionyl-tRNA synthetase 6 2 Op 5 . - CDS 6316 - 6999 495 ## CHAB381_0837 N-methylation 7 2 Op 6 . - CDS 7027 - 8253 1135 ## CHAB381_0835 putative integral membrane protein - Prom 8293 - 8352 4.7 - Term 8300 - 8347 -0.6 8 3 Op 1 1/0.294 - CDS 8365 - 8814 657 ## COG2236 Predicted phosphoribosyltransferases 9 3 Op 2 1/0.294 - CDS 8830 - 10125 1230 ## COG2252 Permeases 10 3 Op 3 . - CDS 10144 - 11226 1083 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes - Prom 11370 - 11429 4.5 + Prom 11211 - 11270 6.2 11 4 Op 1 . + CDS 11368 - 13185 1875 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 12 4 Op 2 . + CDS 13246 - 14379 908 ## gi|257460343|ref|ZP_05625444.1| putative membrane protein + Term 14390 - 14431 1.0 - Term 14891 - 14926 -1.0 13 5 Tu 1 . - CDS 15059 - 16225 1284 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase - Prom 16294 - 16353 6.1 14 6 Op 1 . - CDS 16412 - 18172 1454 ## COG1479 Uncharacterized conserved protein 15 6 Op 2 . - CDS 18227 - 18535 304 ## gi|257460347|ref|ZP_05625448.1| conserved hypothetical protein 16 6 Op 3 . - CDS 18597 - 20678 2209 ## COG2217 Cation transport ATPase 17 6 Op 4 . - CDS 20682 - 21176 647 ## CHAB381_0354 hypothetical protein 18 6 Op 5 . - CDS 21169 - 21471 387 ## gi|257460350|ref|ZP_05625451.1| putative lipoprotein - Prom 21504 - 21563 2.1 19 7 Op 1 . - CDS 21590 - 21970 338 ## gi|257460351|ref|ZP_05625452.1| conserved hypothetical protein - Prom 22004 - 22063 4.2 20 7 Op 2 . - CDS 22066 - 22434 419 ## gi|257460352|ref|ZP_05625453.1| hypothetical protein CAMGR0001_1119 - Prom 22519 - 22578 4.9 - Term 22550 - 22588 0.3 21 8 Op 1 . - CDS 22674 - 22991 370 ## CCC13826_1384 hypothetical protein 22 8 Op 2 . - CDS 23057 - 23584 400 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 23 8 Op 3 . - CDS 23614 - 24630 420 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 24 8 Op 4 3/0.000 - CDS 24555 - 25379 730 ## COG0465 ATP-dependent Zn proteases 25 8 Op 5 3/0.000 - CDS 25363 - 26595 371 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase 26 8 Op 6 3/0.000 - CDS 26592 - 28301 1651 ## COG0668 Small-conductance mechanosensitive channel 27 8 Op 7 3/0.000 - CDS 28298 - 29329 996 ## COG0337 3-dehydroquinate synthetase 28 8 Op 8 . - CDS 29372 - 30790 1219 ## COG3400 Uncharacterized protein conserved in bacteria - Prom 30943 - 31002 7.1 - Term 31015 - 31051 2.4 29 9 Tu 1 . - CDS 31081 - 33330 2738 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 33528 - 33587 8.9 + Prom 33422 - 33481 5.4 30 10 Tu 1 . + CDS 33557 - 34390 799 ## COG1295 Predicted membrane protein + Prom 34451 - 34510 4.4 31 11 Tu 1 . + CDS 34577 - 35062 476 ## gi|257460363|ref|ZP_05625464.1| hypothetical protein CAMGR0001_1130 + Term 35249 - 35286 -0.6 32 12 Tu 1 . - CDS 35137 - 35373 374 ## gi|257460364|ref|ZP_05625465.1| conserved hypothetical protein - Prom 35545 - 35604 6.7 - Term 35516 - 35553 -0.1 33 13 Op 1 3/0.000 - CDS 35612 - 36367 705 ## PROTEIN SUPPORTED gi|154175501|ref|YP_001407903.1| 30S ribosomal protein S16 (BS17) 34 13 Op 2 3/0.000 - CDS 36381 - 37379 842 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 35 13 Op 3 . - CDS 37376 - 38173 857 ## COG0084 Mg-dependent DNase - Prom 38228 - 38287 8.0 - Term 38215 - 38251 1.2 36 14 Op 1 17/0.000 - CDS 38299 - 39822 1403 ## COG0497 ATPase involved in DNA repair 37 14 Op 2 . - CDS 39816 - 40697 973 ## COG0061 Predicted sugar kinase - Prom 40737 - 40796 8.3 38 15 Op 1 3/0.000 + CDS 40795 - 42549 1967 ## COG0173 Aspartyl-tRNA synthetase 39 15 Op 2 . + CDS 42546 - 43127 795 ## COG0563 Adenylate kinase and related kinases + Term 43133 - 43179 7.1 + Prom 43257 - 43316 2.9 40 16 Op 1 . + CDS 43401 - 43757 426 ## COG3111 Uncharacterized conserved protein 41 16 Op 2 . + CDS 43767 - 44285 857 ## COG0221 Inorganic pyrophosphatase + Term 44319 - 44364 7.5 42 17 Tu 1 . - CDS 44858 - 47875 2390 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 47941 - 48000 11.8 43 18 Tu 1 . - CDS 48336 - 49361 563 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 49419 - 49478 1.6 44 19 Tu 1 . - CDS 49496 - 51577 2338 ## COG0855 Polyphosphate kinase - Prom 51601 - 51660 9.1 45 20 Tu 1 . - CDS 51692 - 52477 637 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 52523 - 52582 1.6 46 21 Op 1 . - CDS 52659 - 53195 310 ## gi|257460382|ref|ZP_05625483.1| putative CoA-binding domain protein 47 21 Op 2 . - CDS 53192 - 53731 252 ## gi|257460383|ref|ZP_05625484.1| putative Hsp12 variant C - Prom 53845 - 53904 5.2 - Term 53849 - 53884 -0.8 48 22 Op 1 . - CDS 53950 - 56112 1937 ## HPG27_323 hypothetical protein 49 22 Op 2 . - CDS 56084 - 58162 2142 ## COG0305 Replicative DNA helicase - Prom 58235 - 58294 5.2 - Term 58688 - 58725 2.4 50 23 Tu 1 . - CDS 58929 - 59996 1388 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis - Prom 60017 - 60076 4.9 51 24 Tu 1 . - CDS 60771 - 61811 407 ## gi|257460392|ref|ZP_05625493.1| hypothetical protein CAMGR0001_1159 - Prom 61833 - 61892 3.2 - Term 62307 - 62345 2.0 52 25 Op 1 41/0.000 - CDS 62407 - 64044 1716 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 53 25 Op 2 . - CDS 64057 - 64320 361 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 64484 - 64543 8.7 + Prom 64443 - 64502 7.9 54 26 Tu 1 . + CDS 64527 - 66773 3049 ## CCV52592_0310 hypothetical protein + Term 66900 - 66942 0.4 - Term 67310 - 67356 0.5 55 27 Tu 1 . - CDS 67366 - 68067 579 ## gi|257460398|ref|ZP_05625499.1| hypothetical protein CAMGR0001_1165 - Prom 68121 - 68180 2.3 - Term 68169 - 68198 -0.9 56 28 Op 1 . - CDS 68241 - 68867 253 ## gi|257460400|ref|ZP_05625501.1| hypothetical protein CAMGR0001_1167 57 28 Op 2 . - CDS 68920 - 69549 740 ## gi|257460401|ref|ZP_05625502.1| putative lipoprotein - Prom 69619 - 69678 5.5 58 29 Tu 1 . - CDS 69682 - 70125 242 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 - Prom 70161 - 70220 5.9 - Term 70299 - 70341 9.3 59 30 Tu 1 . - CDS 70370 - 72607 2726 ## COG3256 Nitric oxide reductase large subunit - Prom 72684 - 72743 6.1 60 31 Op 1 . - CDS 72752 - 73402 485 ## gi|257460405|ref|ZP_05625506.1| hypothetical protein CAMGR0001_1172 61 31 Op 2 . - CDS 73444 - 73839 191 ## gi|257460406|ref|ZP_05625507.1| hypothetical protein CAMGR0001_1173 62 31 Op 3 . - CDS 73802 - 74095 180 ## gi|257460407|ref|ZP_05625508.1| conserved hypothetical protein - Prom 74115 - 74174 7.1 63 32 Op 1 . - CDS 74238 - 76148 2105 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 64 32 Op 2 . - CDS 76142 - 76420 292 ## CCC13826_0049 Maf-like protein 65 32 Op 3 . - CDS 76453 - 76686 103 ## CHAB381_0984 Maf-like protein 66 32 Op 4 . - CDS 76686 - 77075 264 ## CHAB381_0985 hypothetical protein - Prom 77119 - 77178 4.7 67 33 Tu 1 . - CDS 77192 - 79735 2383 ## COG0013 Alanyl-tRNA synthetase - Prom 79764 - 79823 9.3 + Prom 79774 - 79833 5.2 68 34 Op 1 1/0.294 + CDS 79857 - 80729 973 ## COG0673 Predicted dehydrogenases and related proteins 69 34 Op 2 . + CDS 80726 - 81823 901 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 70 35 Tu 1 . - CDS 82119 - 83297 1131 ## CHAB381_1159 hypothetical protein - Prom 83447 - 83506 6.2 - Term 83324 - 83363 2.5 71 36 Tu 1 . - CDS 83534 - 84790 1637 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase - Term 85186 - 85230 -0.1 72 37 Op 1 . - CDS 85279 - 87099 2047 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 73 37 Op 2 1/0.294 - CDS 87168 - 87845 771 ## COG2360 Leu/Phe-tRNA-protein transferase 74 37 Op 3 19/0.000 - CDS 87845 - 90226 1211 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 75 37 Op 4 1/0.294 - CDS 90242 - 90547 359 ## COG2127 Uncharacterized conserved protein 76 37 Op 5 1/0.294 - CDS 90537 - 91235 731 ## COG0526 Thiol-disulfide isomerase and thioredoxins 77 37 Op 6 3/0.000 - CDS 91291 - 91755 651 ## COG0691 tmRNA-binding protein - Prom 91795 - 91854 4.2 78 37 Op 7 . - CDS 91881 - 92624 769 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase - Prom 92841 - 92900 4.7 - Term 93323 - 93369 2.8 79 38 Op 1 1/0.294 - CDS 93454 - 94302 881 ## COG0130 Pseudouridine synthase 80 38 Op 2 . - CDS 94295 - 96355 2061 ## COG0210 Superfamily I DNA and RNA helicases 81 38 Op 3 . - CDS 96352 - 96759 419 ## CFF8240_0717 hypothetical protein 82 38 Op 4 . - CDS 96761 - 98674 1950 ## COG1164 Oligoendopeptidase F - Prom 98719 - 98778 7.0 - Term 98722 - 98768 7.0 83 39 Tu 1 . - CDS 98786 - 100045 1392 ## COG3633 Na+/serine symporter - Prom 100101 - 100160 7.5 + Prom 100058 - 100117 5.3 84 40 Tu 1 . + CDS 100190 - 101389 1679 ## COG0192 S-adenosylmethionine synthetase + Term 101467 - 101503 2.3 - Term 102322 - 102359 -0.9 85 41 Tu 1 . - CDS 102410 - 103594 1065 ## COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component - Prom 103616 - 103675 4.9 + Prom 103584 - 103643 7.7 86 42 Tu 1 . + CDS 103716 - 105062 1437 ## COG0579 Predicted dehydrogenase + Term 105085 - 105149 10.4 + Prom 105251 - 105310 5.7 87 43 Tu 1 . + CDS 105375 - 106844 2103 ## COG0469 Pyruvate kinase + Prom 106886 - 106945 2.2 88 44 Tu 1 . + CDS 106966 - 107157 65 ## gi|257460440|ref|ZP_05625541.1| hypothetical protein CAMGR0001_1207 + Prom 107192 - 107251 4.6 89 45 Tu 1 . + CDS 107430 - 108128 808 ## CCV52592_1506 hypothetical protein + Prom 108267 - 108326 7.1 90 46 Tu 1 . + CDS 108541 - 109776 1692 ## FN0155 hypothetical protein + Term 109896 - 109961 7.2 + Prom 109927 - 109986 1.8 91 47 Op 1 . + CDS 110012 - 111442 1261 ## FN0155 hypothetical protein 92 47 Op 2 . + CDS 111459 - 111761 435 ## gi|257460445|ref|ZP_05625546.1| hypothetical protein CAMGR0001_1212 + Prom 111979 - 112038 3.5 93 48 Tu 1 . + CDS 112151 - 112510 197 ## gi|257460446|ref|ZP_05625547.1| hypothetical protein CAMGR0001_1213 + Prom 112604 - 112663 4.8 94 49 Op 1 . + CDS 112880 - 113236 492 ## A1I_07785 hypothetical protein 95 49 Op 2 . + CDS 113299 - 114030 755 ## CCV52592_1834 hypothetical protein 96 49 Op 3 . + CDS 114099 - 114524 621 ## CCV52592_1222 ecotin 97 49 Op 4 . + CDS 114541 - 114903 283 ## Coch_0122 hypothetical protein + Prom 115460 - 115519 4.8 98 50 Tu 1 . + CDS 115546 - 116241 879 ## COG2606 Uncharacterized conserved protein + Prom 116340 - 116399 4.8 99 51 Tu 1 . + CDS 116444 - 117061 456 ## gi|257460455|ref|ZP_05625556.1| hypothetical protein CAMGR0001_1222 + Term 117223 - 117263 3.1 - Term 117446 - 117492 8.1 100 52 Tu 1 . - CDS 117521 - 117811 495 ## CCC13826_1909 hypothetical protein - Prom 117973 - 118032 5.3 101 53 Tu 1 . - CDS 118149 - 119438 1707 ## COG0141 Histidinol dehydrogenase - Prom 119560 - 119619 6.7 + Prom 119380 - 119439 7.3 102 54 Tu 1 . + CDS 119586 - 121382 1031 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 121417 - 121466 2.7 103 55 Op 1 . - CDS 121723 - 122745 1403 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 104 55 Op 2 . - CDS 122732 - 124021 1222 ## CHAB381_1219 hypothetical protein 105 55 Op 3 3/0.000 - CDS 124023 - 125087 1200 ## COG0191 Fructose/tagatose bisphosphate aldolase 106 55 Op 4 . - CDS 125102 - 125911 984 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 125934 - 125993 10.6 + Prom 125931 - 125990 5.2 107 56 Tu 1 . + CDS 126017 - 126652 730 ## COG0177 Predicted EndoIII-related endonuclease + Term 126674 - 126714 -0.3 - Term 126895 - 126923 -0.6 108 57 Tu 1 . - CDS 127101 - 128378 1654 ## COG2195 Di- and tripeptidases - Prom 128590 - 128649 6.5 109 58 Op 1 . - CDS 128658 - 128918 384 ## CCV52592_0117 mercuric transport protein periplasmic component 110 58 Op 2 . - CDS 128911 - 129312 232 ## CCC13826_2065 hypothetical protein - Prom 129476 - 129535 6.1 - Term 129514 - 129550 1.1 111 59 Tu 1 . - CDS 129695 - 130765 1260 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Prom 130865 - 130924 5.2 - Term 130998 - 131038 0.2 112 60 Tu 1 . - CDS 131122 - 132177 1050 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Prom 132263 - 132322 6.2 + Prom 132146 - 132205 7.0 113 61 Tu 1 . + CDS 132284 - 133177 1012 ## COG0500 SAM-dependent methyltransferases + Term 133256 - 133295 2.2 - Term 132997 - 133039 -0.8 114 62 Tu 1 . - CDS 133156 - 133419 63 ## gi|257460477|ref|ZP_05625578.1| hypothetical protein CAMGR0001_1243 - Prom 133529 - 133588 5.0 115 63 Tu 1 . - CDS 133922 - 134521 703 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 134549 - 134608 6.0 + Prom 134463 - 134522 6.8 116 64 Op 1 . + CDS 134617 - 135420 853 ## COG0171 NAD synthase 117 64 Op 2 . + CDS 135431 - 136567 1193 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 118 64 Op 3 . + CDS 136560 - 137666 658 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 119 64 Op 4 . + CDS 137685 - 138542 1154 ## COG0548 Acetylglutamate kinase 120 65 Op 1 1/0.294 + CDS 138663 - 140204 1807 ## COG0498 Threonine synthase 121 65 Op 2 . + CDS 140201 - 140923 819 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 122 65 Op 3 . + CDS 140913 - 141164 208 ## gi|257460488|ref|ZP_05625589.1| hypothetical protein CAMGR0001_1255 123 65 Op 4 . + CDS 141161 - 143167 2478 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) + Term 143240 - 143280 2.8 124 66 Op 1 . + CDS 143434 - 143733 119 ## gi|257460490|ref|ZP_05625591.1| hypothetical protein CAMGR0001_1257 125 66 Op 2 . + CDS 143730 - 144908 1055 ## COG1189 Predicted rRNA methylase 126 66 Op 3 . + CDS 144898 - 145410 550 ## COG3040 Bacterial lipocalin 127 66 Op 4 1/0.294 + CDS 145410 - 146792 782 ## COG0196 FAD synthase 128 67 Tu 1 . + CDS 147643 - 148347 884 ## COG0500 SAM-dependent methyltransferases - Term 148731 - 148759 1.0 129 68 Tu 1 . - CDS 148813 - 149085 361 ## PROTEIN SUPPORTED gi|154149212|ref|YP_001406498.1| ribosomal protein S15 - Prom 149309 - 149368 5.4 + Prom 149108 - 149167 8.8 130 69 Op 1 . + CDS 149190 - 149603 589 ## COG1959 Predicted transcriptional regulator 131 69 Op 2 . + CDS 149600 - 150652 1174 ## COG2404 Predicted phosphohydrolase (DHH superfamily) 132 69 Op 3 . + CDS 150642 - 150884 504 ## CHAB381_0934 hypothetical protein + Term 151082 - 151141 1.1 133 70 Tu 1 . - CDS 151340 - 151840 -220 ## gi|257460504|ref|ZP_05625605.1| hypothetical protein CAMGR0001_1271 - Prom 151915 - 151974 6.3 + Prom 151664 - 151723 7.0 134 71 Tu 1 . + CDS 151949 - 153142 1397 ## COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component - Term 154007 - 154046 6.0 135 72 Op 1 5/0.000 - CDS 154064 - 155815 2040 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 155846 - 155905 1.6 136 72 Op 2 . - CDS 155909 - 156331 481 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 156517 - 156576 6.7 + Prom 156475 - 156534 8.9 137 73 Op 1 4/0.000 + CDS 156725 - 157324 539 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 138 73 Op 2 10/0.000 + CDS 157321 - 159294 1884 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 139 73 Op 3 4/0.000 + CDS 159305 - 160234 651 ## COG0650 Formate hydrogenlyase subunit 4 140 73 Op 4 7/0.000 + CDS 160236 - 160880 731 ## COG4237 Hydrogenase 4 membrane component (E) 141 73 Op 5 7/0.000 + CDS 160883 - 162364 1293 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 142 73 Op 6 5/0.000 + CDS 162367 - 164103 1724 ## COG3261 Ni,Fe-hydrogenase III large subunit 143 73 Op 7 6/0.000 + CDS 164100 - 164639 574 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 144 73 Op 8 . + CDS 164636 - 165460 588 ## COG3260 Ni,Fe-hydrogenase III small subunit 145 73 Op 9 . + CDS 165457 - 165801 513 ## CCC13826_0714 hypothetical protein 146 73 Op 10 . + CDS 165801 - 166253 501 ## COG0680 Ni,Fe-hydrogenase maturation factor 147 73 Op 11 . + CDS 166254 - 167117 949 ## COG2116 Formate/nitrite family of transporters + Term 167153 - 167183 5.0 148 74 Tu 1 . - CDS 167592 - 168230 673 ## CCV52592_1641 hypothetical protein + Prom 168471 - 168530 13.8 149 75 Op 1 3/0.000 + CDS 168583 - 168840 356 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis 150 75 Op 2 . + CDS 168874 - 169413 534 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis + Term 169500 - 169534 0.2 + Prom 169554 - 169613 5.9 151 76 Tu 1 . + CDS 169640 - 171052 893 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Prom 171090 - 171149 7.1 152 77 Tu 1 . + CDS 171199 - 171885 908 ## COG2258 Uncharacterized protein conserved in bacteria - Term 172769 - 172817 -0.8 153 78 Op 1 . - CDS 172849 - 173820 987 ## CCV52592_2062 hypothetical protein 154 78 Op 2 . - CDS 173898 - 174491 511 ## gi|257460530|ref|ZP_05625631.1| hypothetical protein CAMGR0001_1297 - Prom 174578 - 174637 3.5 - Term 174716 - 174776 1.5 155 79 Tu 1 . - CDS 174833 - 175210 595 ## COG0251 Putative translation initiation inhibitor, yjgF family - Term 176368 - 176403 1.7 156 80 Tu 1 . - CDS 176457 - 177218 1013 ## COG0730 Predicted permeases - Prom 177359 - 177418 5.9 - Term 177635 - 177675 -1.0 157 81 Op 1 . - CDS 177692 - 178480 770 ## CHAB381_0721 hypothetical protein 158 81 Op 2 . - CDS 178477 - 179937 1341 ## COG0742 N6-adenine-specific methylase 159 81 Op 3 . - CDS 179930 - 180256 356 ## CCV52592_0780 hypothetical protein 160 81 Op 4 . - CDS 180256 - 181353 770 ## COG1565 Uncharacterized conserved protein 161 81 Op 5 . - CDS 181350 - 182519 1654 ## COG4992 Ornithine/acetylornithine aminotransferase 162 81 Op 6 . - CDS 182516 - 183133 872 ## COG2860 Predicted membrane protein - Prom 183340 - 183399 5.5 163 82 Op 1 . - CDS 183691 - 184737 1068 ## COG1073 Hydrolases of the alpha/beta superfamily - Term 184760 - 184802 -0.8 164 82 Op 2 . - CDS 184805 - 185392 689 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 165 82 Op 3 . - CDS 185377 - 186756 1768 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 166 82 Op 4 . - CDS 186765 - 187934 1122 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 188045 - 188104 9.0 + Prom 187991 - 188050 5.8 167 83 Op 1 . + CDS 188136 - 188801 754 ## CHAB381_1628 hypothetical protein 168 83 Op 2 . + CDS 188794 - 190176 1428 ## COG0277 FAD/FMN-containing dehydrogenases + Term 190323 - 190369 -0.3 - Term 190712 - 190771 6.8 169 84 Op 1 . - CDS 190817 - 191200 264 ## COG0790 FOG: TPR repeat, SEL1 subfamily 170 84 Op 2 . - CDS 191158 - 191502 420 ## gi|257460553|ref|ZP_05625654.1| cysteine-rich protein H - Prom 191658 - 191717 8.2 171 85 Tu 1 . - CDS 192279 - 192647 582 ## Coch_0018 ethyl tert-butyl ether degradation EthD - Prom 192682 - 192741 4.5 - Term 193032 - 193074 -0.6 172 86 Tu 1 . - CDS 193110 - 193502 397 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) - Prom 193553 - 193612 3.9 - Term 194305 - 194340 2.3 173 87 Op 1 1/0.294 - CDS 194341 - 195129 852 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 174 87 Op 2 1/0.294 - CDS 195113 - 196318 866 ## COG2861 Uncharacterized protein conserved in bacteria 175 87 Op 3 . - CDS 196332 - 197354 1476 ## COG0059 Ketol-acid reductoisomerase + Prom 197347 - 197406 4.8 176 88 Tu 1 . + CDS 197493 - 198449 811 ## COG0345 Pyrroline-5-carboxylate reductase + Term 198607 - 198652 -0.8 - Term 198888 - 198925 1.5 177 89 Tu 1 . - CDS 199142 - 199780 725 ## Bacsa_0467 hypothetical protein - Prom 199927 - 199986 2.9 + Prom 199852 - 199911 5.7 178 90 Tu 1 . + CDS 199956 - 200678 737 ## Celal_1460 hypothetical protein 179 91 Tu 1 . + CDS 201006 - 201815 1111 ## MSMEG_5752 hypothetical protein + Term 201897 - 201931 4.5 + Prom 201880 - 201939 5.2 180 92 Tu 1 . + CDS 201960 - 202889 1079 ## FN0976 hypothetical protein + Term 202965 - 203000 0.0 181 93 Tu 1 . - CDS 203227 - 204207 703 ## Saut_1457 putative galanin - Prom 204250 - 204309 4.0 182 94 Tu 1 . - CDS 204350 - 204778 316 ## gi|257460576|ref|ZP_05625677.1| hypothetical protein CAMGR0001_1343 - Prom 204828 - 204887 6.1 - Term 205185 - 205236 2.4 183 95 Op 1 3/0.000 - CDS 205250 - 206032 894 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 206053 - 206112 3.5 - Term 206104 - 206148 1.2 184 95 Op 2 . - CDS 206242 - 207045 416 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 207086 - 207145 3.3 185 96 Op 1 . - CDS 207186 - 208982 1725 ## COG0018 Arginyl-tRNA synthetase 186 96 Op 2 . - CDS 208988 - 209200 488 ## gi|257460581|ref|ZP_05625682.1| twin arginine-targeting protein translocase, TatA/E family 187 96 Op 3 . - CDS 209211 - 209810 500 ## COG0194 Guanylate kinase 188 96 Op 4 . - CDS 209825 - 211897 1568 ## CHAB381_1250 hypothetical protein 189 96 Op 5 1/0.294 - CDS 211955 - 212596 232 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 190 96 Op 6 38/0.000 - CDS 212599 - 213663 415 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts 191 96 Op 7 . - CDS 213663 - 214460 1196 ## PROTEIN SUPPORTED gi|118474889|ref|YP_892581.1| 30S ribosomal protein S2 - Prom 214570 - 214629 6.2 - Term 214505 - 214535 -0.3 192 97 Tu 1 . - CDS 214745 - 215884 1462 ## CCC13826_0552 isoaspartyl dipeptidase (EC:3.4.19.5) - Prom 216001 - 216060 3.2 193 98 Op 1 1/0.294 - CDS 216072 - 216806 624 ## COG1496 Uncharacterized conserved protein 194 98 Op 2 . - CDS 216817 - 217671 962 ## COG0307 Riboflavin synthase alpha chain - Prom 217711 - 217770 6.5 - Term 217718 - 217762 0.5 195 99 Tu 1 . - CDS 217773 - 218093 456 ## COG2863 Cytochrome c553 - Prom 218234 - 218293 4.1 - Term 218318 - 218354 -1.0 196 100 Tu 1 . - CDS 218373 - 219926 195 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 219980 - 220039 6.6 197 101 Op 1 40/0.000 - CDS 220635 - 221912 1096 ## COG0642 Signal transduction histidine kinase 198 101 Op 2 . - CDS 221905 - 222576 557 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 222623 - 222682 4.4 199 102 Op 1 . + CDS 222488 - 224152 1558 ## CCV52592_2207 metalloid reductase RarA 200 102 Op 2 . + CDS 224175 - 225938 1323 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 201 102 Op 3 . + CDS 225935 - 226462 624 ## Slip_1675 NapC/NirT cytochrome c domain protein + Term 226466 - 226505 8.4 - Term 226452 - 226493 5.6 202 103 Op 1 . - CDS 226579 - 226743 114 ## 203 103 Op 2 . - CDS 226817 - 228709 2327 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Prom 228961 - 229020 7.6 204 104 Op 1 . + CDS 229042 - 230031 924 ## COG0502 Biotin synthase and related enzymes 205 104 Op 2 . + CDS 230071 - 230496 359 ## gi|257460601|ref|ZP_05625702.1| putative lipoprotein + Term 230498 - 230548 5.6 - TRNA 230678 - 230752 61.4 # Glu CTC 0 0 + Prom 231113 - 231172 3.8 206 105 Tu 1 . + CDS 231376 - 231573 139 ## gi|257460605|ref|ZP_05625706.1| hypothetical protein CAMGR0001_1373 + Prom 231585 - 231644 6.3 207 106 Tu 1 . + CDS 231726 - 231965 66 ## gi|257460606|ref|ZP_05625707.1| hypothetical protein CAMGR0001_1374 + Term 232201 - 232239 1.4 208 107 Tu 1 . - CDS 232602 - 234752 2556 ## CCV52592_1393 putative high-molecular-weight surface-exposed protein - Prom 234831 - 234890 9.3 - Term 234986 - 235046 4.6 209 108 Op 1 . - CDS 235252 - 235422 119 ## gi|257460611|ref|ZP_05625712.1| phosphoribosylformylglycinamidine cyclo-ligase 210 108 Op 2 . - CDS 235446 - 235865 169 ## CCC13826_2111 phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) 211 108 Op 3 . - CDS 235867 - 236199 175 ## CCC13826_2111 phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) 212 108 Op 4 . - CDS 236209 - 236478 70 ## gi|257460614|ref|ZP_05625715.1| phosphoribosylformylglycinamidine cyclo-ligase 213 108 Op 5 . - CDS 236480 - 236998 476 ## gi|257460615|ref|ZP_05625716.1| hypothetical protein CAMGR0001_1383 - Prom 237117 - 237176 3.4 - Term 237393 - 237461 16.1 214 109 Op 1 . - CDS 237666 - 238118 439 ## gi|257460618|ref|ZP_05625719.1| hypothetical protein CAMGR0001_1386 215 109 Op 2 . - CDS 238119 - 238778 916 ## CHAB381_1372 hypothetical protein - Prom 238916 - 238975 6.4 - Term 239665 - 239699 0.2 216 110 Tu 1 . - CDS 239791 - 241002 1794 ## COG1171 Threonine dehydratase - Prom 241026 - 241085 5.8 217 111 Op 1 1/0.294 - CDS 241103 - 242662 1551 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 218 111 Op 2 . - CDS 242659 - 244359 1953 ## COG1757 Na+/H+ antiporter - Term 244957 - 244999 0.0 219 112 Tu 1 . - CDS 245044 - 246294 1363 ## COG0666 FOG: Ankyrin repeat - Term 246705 - 246757 8.5 220 113 Op 1 . - CDS 246758 - 248935 2422 ## COG2217 Cation transport ATPase 221 113 Op 2 . - CDS 248947 - 249162 364 ## CCC13826_1516 asparagine synthase, glutamine-hydrolyzing (EC:6.3.5.4) - Prom 249210 - 249269 8.2 + Prom 249209 - 249268 7.8 222 114 Op 1 1/0.294 + CDS 249295 - 250029 882 ## COG0217 Uncharacterized conserved protein 223 114 Op 2 . + CDS 250038 - 250526 589 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 224 114 Op 3 . + CDS 250561 - 250926 262 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Prom 250928 - 250987 6.0 225 115 Tu 1 . + CDS 251045 - 251938 557 ## gi|257460640|ref|ZP_05625741.1| hypothetical protein CAMGR0001_1408 - Term 252378 - 252421 -0.6 226 116 Tu 1 . - CDS 252428 - 253771 1682 ## COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 253795 - 253854 5.7 + Prom 253691 - 253750 6.1 227 117 Op 1 . + CDS 253876 - 254748 1047 ## COG2962 Predicted permeases 228 117 Op 2 . + CDS 254741 - 255151 572 ## CHAB381_0850 hypothetical protein - Term 255701 - 255739 1.6 229 118 Op 1 3/0.000 - CDS 255888 - 256277 387 ## COG0666 FOG: Ankyrin repeat 230 118 Op 2 . - CDS 256373 - 257809 1557 ## COG0753 Catalase - Prom 257834 - 257893 11.0 - Term 258129 - 258193 2.1 231 119 Tu 1 . - CDS 258196 - 259551 893 ## CHAB381_1161 ankyrin repeat-containing protein - Prom 259775 - 259834 4.8 232 120 Tu 1 . - CDS 259883 - 260266 228 ## gi|257460650|ref|ZP_05625751.1| conserved hypothetical protein - Prom 260309 - 260368 7.0 + Prom 259985 - 260044 4.0 233 121 Tu 1 . + CDS 260159 - 260449 95 ## 234 122 Tu 1 . - CDS 260437 - 261288 623 ## CHAB381_1432 hypothetical protein - Prom 261317 - 261376 2.8 - Term 261425 - 261462 6.0 235 123 Op 1 36/0.000 - CDS 261465 - 262202 1016 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 236 123 Op 2 8/0.000 - CDS 262195 - 264213 2216 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 237 123 Op 3 1/0.294 - CDS 264224 - 264907 623 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit - Prom 264941 - 265000 4.3 - Term 264916 - 264959 2.4 238 124 Tu 1 . - CDS 265002 - 265820 859 ## COG0682 Prolipoprotein diacylglyceryltransferase - Term 266267 - 266327 -0.2 239 125 Op 1 . - CDS 266485 - 267024 741 ## CHAB381_0854 hypothetical protein 240 125 Op 2 . - CDS 267044 - 268201 1047 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 241 125 Op 3 . - CDS 268198 - 269199 1231 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 242 125 Op 4 . - CDS 269199 - 269555 420 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 269748 - 269807 6.2 + Prom 270122 - 270181 4.0 243 126 Tu 1 . + CDS 270291 - 270758 -194 ## gi|257460665|ref|ZP_05625766.1| hypothetical protein CAMGR0001_1433 - Term 270672 - 270732 7.4 244 127 Op 1 1/0.294 - CDS 270807 - 271607 944 ## COG0134 Indole-3-glycerol phosphate synthase 245 127 Op 2 4/0.000 - CDS 271610 - 273454 1753 ## COG0457 FOG: TPR repeat 246 127 Op 3 1/0.294 - CDS 273421 - 273792 343 ## COG0727 Predicted Fe-S-cluster oxidoreductase 247 127 Op 4 . - CDS 273785 - 275026 476 ## COG4123 Predicted O-methyltransferase 248 127 Op 5 . - CDS 275023 - 275970 1137 ## COG0492 Thioredoxin reductase - Prom 276061 - 276120 4.6 - Term 276240 - 276290 7.1 249 128 Tu 1 . - CDS 276317 - 277051 824 ## gi|257460671|ref|ZP_05625772.1| protein TonB 250 129 Op 1 30/0.000 - CDS 277153 - 277536 523 ## COG0848 Biopolymer transport protein 251 129 Op 2 . - CDS 277537 - 277965 577 ## COG0811 Biopolymer transport proteins - Prom 278142 - 278201 7.7 + Prom 278128 - 278187 10.1 252 130 Tu 1 . + CDS 278241 - 280310 2256 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 280375 - 280437 16.7 + Prom 280424 - 280483 4.7 253 131 Tu 1 . + CDS 280672 - 282066 1440 ## COG4452 Inner membrane protein involved in colicin E2 resistance + Term 282099 - 282141 6.1 254 132 Tu 1 . + CDS 282425 - 283432 536 ## PROTEIN SUPPORTED gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 255 133 Tu 1 . - CDS 283491 - 283955 416 ## gi|257460679|ref|ZP_05625780.1| hypothetical protein CAMGR0001_1447 - Prom 283978 - 284037 5.1 - Term 284197 - 284238 2.9 256 134 Tu 1 . - CDS 284277 - 285452 1052 ## COG0603 Predicted PP-loop superfamily ATPase - Prom 285478 - 285537 5.9 + Prom 285423 - 285482 7.0 257 135 Tu 1 . + CDS 285507 - 286136 877 ## COG0319 Predicted metal-dependent hydrolase 258 136 Tu 1 . - CDS 286341 - 286910 403 ## gi|257460684|ref|ZP_05625785.1| hypothetical protein CAMGR0001_1451 - Prom 287102 - 287161 6.2 259 137 Tu 1 . - CDS 287201 - 287815 381 ## gi|257460685|ref|ZP_05625786.1| hypothetical protein CAMGR0001_1453 - Prom 287858 - 287917 5.5 260 138 Op 1 . - CDS 287991 - 288797 499 ## gi|257460686|ref|ZP_05625787.1| hypothetical protein CAMGR0001_1454 261 138 Op 2 . - CDS 288806 - 289606 418 ## gi|257460687|ref|ZP_05625788.1| hypothetical protein CAMGR0001_1455 - Prom 289665 - 289724 8.7 - Term 289735 - 289765 -0.7 262 139 Tu 1 . - CDS 289794 - 290144 126 ## gi|257460688|ref|ZP_05625789.1| hypothetical protein CAMGR0001_1456 263 140 Op 1 1/0.294 - CDS 290231 - 293038 2285 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 264 140 Op 2 . - CDS 293043 - 293516 364 ## COG2165 Type II secretory pathway, pseudopilin PulG - Prom 293538 - 293597 8.8 265 141 Op 1 1/0.294 - CDS 293599 - 294669 775 ## COG0688 Phosphatidylserine decarboxylase 266 141 Op 2 . - CDS 294670 - 295797 869 ## COG1408 Predicted phosphohydrolases 267 141 Op 3 . - CDS 295801 - 296439 632 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 268 141 Op 4 . - CDS 296449 - 296850 619 ## COG1970 Large-conductance mechanosensitive channel - Prom 296870 - 296929 6.5 + Prom 296880 - 296939 7.0 269 142 Op 1 . + CDS 296965 - 298281 1442 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 270 142 Op 2 . + CDS 298268 - 298564 342 ## CHAB381_1379 YGGT family protein 271 142 Op 3 . + CDS 298561 - 300225 1693 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Term 300830 - 300870 -0.4 272 143 Op 1 . - CDS 301107 - 302063 1002 ## Celly_3065 hypothetical protein 273 143 Op 2 . - CDS 302074 - 302595 563 ## CHAB381_0731 putative lipoprotein - Prom 302680 - 302739 5.4 + Prom 302613 - 302672 4.8 274 144 Op 1 1/0.294 + CDS 302696 - 303184 564 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein 275 144 Op 2 . + CDS 303194 - 304042 932 ## COG0158 Fructose-1,6-bisphosphatase 276 144 Op 3 . + CDS 304042 - 304251 311 ## Nitsa_1094 hypothetical protein + Term 304493 - 304534 2.3 277 145 Op 1 1/0.294 + CDS 305285 - 305854 607 ## COG1280 Putative threonine efflux protein 278 145 Op 2 . + CDS 305870 - 307048 1332 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 307139 - 307177 -0.2 - Term 307997 - 308047 4.0 279 146 Tu 1 . - CDS 308107 - 308667 617 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Prom 308699 - 308758 5.9 280 147 Op 1 . - CDS 308811 - 310763 1078 ## gi|257460719|ref|ZP_05625820.1| hypothetical protein CAMGR0001_1487 281 147 Op 2 . - CDS 310738 - 311550 855 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 311616 - 311675 6.0 + Prom 311575 - 311634 8.4 282 148 Tu 1 . + CDS 311659 - 312474 839 ## COG2930 Uncharacterized conserved protein + Term 312480 - 312521 4.1 + TRNA 312729 - 312804 86.4 # Lys CTT 0 0 - Term 312894 - 312948 9.0 283 149 Op 1 . - CDS 312976 - 313704 560 ## CHAB381_1186 type I secretion target GGXGXDXXX repeat-containing protein 284 149 Op 2 . - CDS 313723 - 314529 325 ## CHAB381_1187 hypothetical protein 285 149 Op 3 . - CDS 314516 - 314902 164 ## gi|257460725|ref|ZP_05625826.1| hypothetical protein CAMGR0001_1494 286 150 Op 1 2/0.029 - CDS 315596 - 316906 1109 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 287 150 Op 2 5/0.000 - CDS 316908 - 318272 1606 ## COG0836 Mannose-1-phosphate guanylyltransferase 288 150 Op 3 25/0.000 - CDS 318265 - 319389 1229 ## COG0438 Glycosyltransferase 289 150 Op 4 25/0.000 - CDS 319386 - 320489 785 ## COG0438 Glycosyltransferase 290 150 Op 5 . - CDS 320486 - 321616 716 ## COG0438 Glycosyltransferase 291 150 Op 6 . - CDS 321627 - 323717 1736 ## NT01CX_1535 hypothetical protein 292 150 Op 7 . - CDS 323710 - 324915 878 ## COG0438 Glycosyltransferase 293 150 Op 8 . - CDS 324915 - 325883 718 ## CLJ_B2942 hypothetical protein 294 150 Op 9 . - CDS 325883 - 326614 670 ## Desac_1658 Methyltransferase type 12 295 150 Op 10 . - CDS 326617 - 327573 708 ## Odosp_3034 hypothetical protein 296 150 Op 11 . - CDS 327563 - 328621 391 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 297 150 Op 12 . - CDS 328608 - 329831 442 ## NT01CX_1534 RfbX family O-antigen/teichoic acid exporter membrane protein 298 150 Op 13 1/0.294 - CDS 329824 - 330300 233 ## COG0560 Phosphoserine phosphatase - Prom 330381 - 330440 5.2 299 151 Op 1 . - CDS 330476 - 331561 421 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 300 151 Op 2 . - CDS 331563 - 332840 654 ## COG1541 Coenzyme F390 synthetase 301 151 Op 3 . - CDS 332853 - 334979 2311 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 302 151 Op 4 10/0.000 - CDS 335000 - 336199 1007 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 303 151 Op 5 . - CDS 336196 - 337332 890 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 304 151 Op 6 . - CDS 337398 - 339440 836 ## gi|257460746|ref|ZP_05625847.1| putative membrane protein - Prom 339496 - 339555 9.5 305 152 Op 1 . - CDS 339681 - 341714 535 ## Pnec_0344 hypothetical protein 306 152 Op 2 . - CDS 341717 - 343774 604 ## Pnec_0344 hypothetical protein 307 152 Op 3 1/0.294 - CDS 343777 - 344475 717 ## COG2231 Uncharacterized protein related to Endonuclease III - Prom 344504 - 344563 2.3 - Term 344553 - 344587 -0.6 308 153 Op 1 1/0.294 - CDS 344594 - 345577 873 ## COG2607 Predicted ATPase (AAA+ superfamily) 309 153 Op 2 . - CDS 345561 - 348521 3135 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 310 153 Op 3 3/0.000 - CDS 348521 - 349414 896 ## COG0739 Membrane proteins related to metalloendopeptidases 311 153 Op 4 . - CDS 349407 - 350984 1353 ## COG0285 Folylpolyglutamate synthase 312 153 Op 5 . - CDS 350965 - 351504 623 ## CHAB381_0472 hypothetical protein 313 153 Op 6 . - CDS 351511 - 353958 2820 ## COG0495 Leucyl-tRNA synthetase 314 153 Op 7 . - CDS 353968 - 354309 447 ## Cla_1046 hypothetical protein 315 153 Op 8 31/0.000 - CDS 354319 - 355287 1124 ## COG0341 Preprotein translocase subunit SecF 316 153 Op 9 25/0.000 - CDS 355274 - 356875 1858 ## COG0342 Preprotein translocase subunit SecD 317 153 Op 10 . - CDS 356865 - 357137 402 ## COG1862 Preprotein translocase subunit YajC - Prom 357164 - 357223 5.8 + Prom 357031 - 357090 3.3 318 154 Op 1 . + CDS 357113 - 358456 1122 ## COG0815 Apolipoprotein N-acyltransferase + Term 358457 - 358501 0.1 319 154 Op 2 3/0.000 + CDS 358521 - 359240 964 ## COG0528 Uridylate kinase 320 154 Op 3 18/0.000 + CDS 359264 - 359482 313 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 321 154 Op 4 3/0.000 + CDS 359460 - 361652 2533 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 322 154 Op 5 3/0.000 + CDS 361667 - 362872 264 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 323 154 Op 6 3/0.000 + CDS 362872 - 363960 1267 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 324 154 Op 7 . + CDS 363944 - 365860 1745 ## COG0860 N-acetylmuramoyl-L-alanine amidase 325 155 Op 1 . + CDS 366528 - 367148 728 ## gi|257460771|ref|ZP_05625872.1| hypothetical protein CAMGR0001_1540 326 155 Op 2 . + CDS 367145 - 367471 321 ## gi|257460772|ref|ZP_05625873.1| hypothetical protein CAMGR0001_1541 327 156 Tu 1 . - CDS 367576 - 368682 1172 ## COG0772 Bacterial cell division membrane protein - Prom 368704 - 368763 3.9 + Prom 368609 - 368668 5.4 328 157 Op 1 3/0.000 + CDS 368735 - 370222 1143 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 329 157 Op 2 3/0.000 + CDS 370152 - 370817 758 ## COG3401 Fibronectin type 3 domain-containing protein 330 157 Op 3 3/0.000 + CDS 370845 - 373013 1711 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 331 157 Op 4 . + CDS 373001 - 373690 700 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 332 157 Op 5 . + CDS 373677 - 374492 977 ## CHAB381_1285 cell division protein FtsX 333 157 Op 6 . + CDS 374489 - 375871 1843 ## COG0739 Membrane proteins related to metalloendopeptidases 334 157 Op 7 . + CDS 375875 - 376219 142 ## gi|257460780|ref|ZP_05625881.1| hypothetical protein CAMGR0001_1549 335 157 Op 8 12/0.000 + CDS 376245 - 377060 847 ## COG2966 Uncharacterized conserved protein 336 157 Op 9 . + CDS 377053 - 377553 409 ## COG3610 Uncharacterized conserved protein + Prom 377763 - 377822 8.5 337 158 Tu 1 . + CDS 377860 - 378873 619 ## BMULJ_06181 hypothetical protein 338 159 Tu 1 . - CDS 379081 - 380241 1074 ## COG3182 Uncharacterized iron-regulated membrane protein - Prom 380297 - 380356 7.2 + Prom 380424 - 380483 6.1 339 160 Op 1 . + CDS 380597 - 381028 252 ## gi|257460787|ref|ZP_05625888.1| hypothetical protein CAMGR0001_1556 340 160 Op 2 . + CDS 381105 - 381287 73 ## gi|257460788|ref|ZP_05625889.1| hypothetical protein CAMGR0001_1557 341 160 Op 3 . + CDS 381332 - 382054 393 ## gi|257460789|ref|ZP_05625890.1| hypothetical protein CAMGR0001_1558 + Prom 382280 - 382339 5.5 342 161 Tu 1 . + CDS 382363 - 383256 1097 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 383283 - 383319 2.6 + Prom 383439 - 383498 4.8 343 162 Tu 1 . + CDS 383590 - 384303 1067 ## CCV52592_1750 von Willebrand factor type A domain-containing protein + Prom 384526 - 384585 5.5 344 163 Tu 1 . + CDS 384655 - 385761 1292 ## COG3616 Predicted amino acid aldolase or racemase + Prom 385773 - 385832 3.3 345 164 Tu 1 . + CDS 385905 - 386345 577 ## PROTEIN SUPPORTED gi|157165346|ref|YP_001466236.1| 50S ribosomal protein L23 + Term 386381 - 386427 -0.8 346 165 Tu 1 . - CDS 386262 - 386552 170 ## 347 166 Op 1 . - CDS 386721 - 387353 541 ## COG0790 FOG: TPR repeat, SEL1 subfamily 348 166 Op 2 . - CDS 387410 - 390049 1823 ## HDN1F_00180 hypothetical protein - Prom 390088 - 390147 6.6 349 167 Tu 1 . - CDS 390884 - 391087 65 ## gi|257460803|ref|ZP_05625904.1| hypothetical protein CAMGR0001_1572 - Prom 391330 - 391389 3.2 - Term 391325 - 391366 -1.0 350 168 Tu 1 . - CDS 391430 - 393076 2157 ## COG2759 Formyltetrahydrofolate synthetase 351 169 Tu 1 . - CDS 393217 - 393975 833 ## COG0708 Exonuclease III - Prom 394000 - 394059 7.7 + Prom 393956 - 394015 5.6 352 170 Tu 1 . + CDS 394043 - 394405 549 ## COG0818 Diacylglycerol kinase + Prom 394710 - 394769 7.8 353 171 Op 1 . + CDS 394972 - 395928 729 ## CCV52592_1998 amino acid carrier family protein 354 171 Op 2 . + CDS 395925 - 398060 2175 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Prom 398108 - 398167 5.0 355 172 Tu 1 . + CDS 398282 - 400735 2975 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 400799 - 400848 -0.7 - Term 401279 - 401307 -0.1 356 173 Op 1 1/0.294 - CDS 401361 - 402014 783 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 357 173 Op 2 15/0.000 - CDS 401914 - 402639 862 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 358 173 Op 3 . - CDS 402636 - 403565 1155 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 403618 - 403677 10.3 - Term 403767 - 403827 10.7 359 174 Tu 1 . - CDS 403845 - 404375 690 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 360 175 Op 1 . - CDS 404933 - 405763 527 ## gi|257460819|ref|ZP_05625920.1| hypothetical protein CAMGR0001_1588 361 175 Op 2 . - CDS 405775 - 406905 250 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 406925 - 406984 4.7 + Prom 406937 - 406996 5.3 362 176 Op 1 . + CDS 407024 - 409783 3011 ## COG0060 Isoleucyl-tRNA synthetase 363 176 Op 2 3/0.000 + CDS 409880 - 411238 1746 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 364 176 Op 3 . + CDS 411241 - 412692 1901 ## COG0516 IMP dehydrogenase/GMP reductase 365 176 Op 4 . + CDS 412689 - 413795 1122 ## COG2021 Homoserine acetyltransferase 366 176 Op 5 . + CDS 413785 - 413970 325 ## gi|257460826|ref|ZP_05625927.1| conserved hypothetical protein 367 176 Op 6 . + CDS 413980 - 415155 1187 ## COG0388 Predicted amidohydrolase 368 176 Op 7 . + CDS 415152 - 415817 668 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 369 177 Tu 1 . - CDS 415827 - 417158 892 ## CHAB381_1159 hypothetical protein - Prom 417230 - 417289 6.5 370 178 Tu 1 . - CDS 417317 - 417727 485 ## COG1959 Predicted transcriptional regulator - Prom 417861 - 417920 6.9 371 179 Tu 1 . - CDS 418687 - 419322 971 ## COG2910 Putative NADH-flavin reductase 372 180 Tu 1 . - CDS 419533 - 419907 479 ## CCC13826_0851 mate efflux family protein - Prom 420019 - 420078 7.9 + Prom 419984 - 420043 8.3 373 181 Op 1 . + CDS 420073 - 420912 803 ## CCC13826_0852 hypothetical protein + Prom 420914 - 420973 6.3 374 181 Op 2 . + CDS 420999 - 421955 1150 ## COG1230 Co/Zn/Cd efflux system component + Term 421978 - 422041 -0.7 + Prom 422499 - 422558 5.2 375 182 Tu 1 . + CDS 422699 - 423154 308 ## gi|257460840|ref|ZP_05625941.1| hypothetical protein CAMGR0001_1609 + Prom 423763 - 423822 4.5 376 183 Tu 1 . + CDS 423843 - 424403 225 ## gi|257460843|ref|ZP_05625944.1| hypothetical protein CAMGR0001_1612 377 184 Tu 1 . - CDS 424489 - 425712 1235 ## COG0117 Pyrimidine deaminase + Prom 426168 - 426227 3.6 378 185 Tu 1 . + CDS 426247 - 426501 360 ## gi|257460845|ref|ZP_05625946.1| conserved hypothetical protein + Term 426600 - 426650 1.0 - Term 427173 - 427210 2.3 379 186 Op 1 3/0.000 - CDS 427220 - 427639 657 ## COG0779 Uncharacterized protein conserved in bacteria 380 186 Op 2 32/0.000 - CDS 427632 - 427997 578 ## COG0858 Ribosome-binding factor A - Term 428983 - 429046 1.2 381 186 Op 3 . - CDS 429090 - 431798 3788 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 382 186 Op 4 . - CDS 431782 - 432009 188 ## gi|257460854|ref|ZP_05625955.1| conserved hypothetical protein 383 186 Op 5 3/0.000 - CDS 432031 - 432912 753 ## COG0083 Homoserine kinase 384 186 Op 6 3/0.000 - CDS 432921 - 433319 334 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 385 186 Op 7 1/0.294 - CDS 433383 - 434267 755 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 386 186 Op 8 . - CDS 434318 - 435697 1099 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 435722 - 435781 5.7 - Term 436185 - 436230 2.1 387 187 Tu 1 . - CDS 436253 - 438466 2515 ## COG4775 Outer membrane protein/protective antigen OMA87 - Prom 438504 - 438563 8.8 + Prom 438493 - 438552 9.3 388 188 Tu 1 . + CDS 438589 - 439419 858 ## COG0287 Prephenate dehydrogenase 389 189 Tu 1 . - CDS 439528 - 440259 662 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Prom 440302 - 440361 5.5 390 190 Op 1 . - CDS 440372 - 440809 233 ## gi|223040831|ref|ZP_03611097.1| hypothetical protein CAMRE0001_3103 391 190 Op 2 . - CDS 440832 - 441758 391 ## PROTEIN SUPPORTED gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase - Prom 441841 - 441900 5.4 - Term 442164 - 442220 4.6 392 191 Op 1 . - CDS 442299 - 443300 1256 ## CHAB381_0534 hypothetical protein 393 191 Op 2 1/0.294 - CDS 443303 - 443659 451 ## COG1734 DnaK suppressor protein 394 191 Op 3 3/0.000 - CDS 443669 - 444049 321 ## COG1576 Uncharacterized conserved protein 395 191 Op 4 . - CDS 444121 - 445020 1041 ## COG0777 Acetyl-CoA carboxylase beta subunit - Prom 445050 - 445109 7.8 + Prom 445019 - 445078 3.0 396 192 Tu 1 . + CDS 445114 - 445728 524 ## CHAB381_1258 putative recombination protein RecO + Term 445961 - 446005 9.1 397 193 Tu 1 . - CDS 446017 - 446703 367 ## COG0338 Site-specific DNA methylase - Term 446743 - 446790 7.6 398 194 Op 1 . - CDS 446831 - 447247 466 ## Pecwa_2458 hypothetical protein 399 194 Op 2 . - CDS 447259 - 448257 749 ## COG3500 Phage protein D 400 194 Op 3 . - CDS 448251 - 448436 172 ## CJE0253 tail protein X, putative 401 194 Op 4 . - CDS 448426 - 448800 304 ## CJE0252 phage tail protein, putative 402 194 Op 5 . - CDS 448802 - 451129 1336 ## COG5283 Phage-related tail protein - Prom 451243 - 451302 6.0 - Term 451528 - 451559 3.4 403 195 Op 1 . - CDS 451561 - 451824 397 ## CFF8240_1799 hypothetical protein 404 195 Op 2 . - CDS 451842 - 452357 517 ## ICDCCJ_692 phage major tail tube protein, putative 405 195 Op 3 . - CDS 452390 - 453553 780 ## COG3497 Phage tail sheath protein FI 406 196 Op 1 . - CDS 453674 - 454213 452 ## gi|257460883|ref|ZP_05625984.1| hypothetical protein CAMGR0001_1652 407 196 Op 2 . - CDS 454218 - 454475 254 ## gi|257458664|ref|ZP_05623791.1| hypothetical protein CAMGR0001_2767 408 196 Op 3 . - CDS 454475 - 454963 568 ## CCV52592_0024 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 409 196 Op 4 . - CDS 454979 - 455797 952 ## GBP346_A2705 GP26 410 196 Op 5 . - CDS 455790 - 456344 552 ## B565_2477 tail fiber protein 411 196 Op 6 4/0.000 - CDS 456341 - 457426 953 ## COG3948 Phage-related baseplate assembly protein 412 196 Op 7 . - CDS 457423 - 457710 390 ## COG3628 Phage baseplate assembly protein W 413 196 Op 8 . - CDS 457712 - 458317 761 ## ICDCCJ_684 baseplate assembly protein V, putative 414 196 Op 9 . - CDS 458307 - 458600 247 ## gi|257460890|ref|ZP_05625991.1| hypothetical protein CAMGR0001_1659 415 196 Op 10 . - CDS 458604 - 458786 88 ## gi|257460891|ref|ZP_05625992.1| hypothetical protein CAMGR0001_1660 416 196 Op 11 . - CDS 458786 - 459007 252 ## CHAB381_0274 putative lipoprotein 417 196 Op 12 . - CDS 458973 - 459284 396 ## gi|257460893|ref|ZP_05625994.1| conserved hypothetical protein 418 196 Op 13 . - CDS 459262 - 459705 525 ## mma_2188 hypothetical protein 419 196 Op 14 . - CDS 459749 - 460069 424 ## gi|257460895|ref|ZP_05625996.1| putative zinc finger protein 131 420 196 Op 15 . - CDS 460079 - 460972 1102 ## CFF8240_0652 hypothetical protein 421 196 Op 16 . - CDS 460969 - 461745 937 ## CFF8240_0651 hypothetical protein - Prom 461804 - 461863 9.2 + Prom 461716 - 461775 4.9 422 197 Tu 1 . + CDS 461923 - 462939 1016 ## COG5518 Bacteriophage capsid portal protein + Prom 463054 - 463113 2.4 423 198 Op 1 . + CDS 463133 - 463459 424 ## gi|257460899|ref|ZP_05626000.1| conserved hypothetical protein 424 198 Op 2 . + CDS 463469 - 463783 546 ## gi|257460900|ref|ZP_05626001.1| hypothetical protein CAMGR0001_1669 425 198 Op 3 . + CDS 463783 - 465339 1305 ## COG4373 Mu-like prophage FluMu protein gp28 + Term 465372 - 465409 -0.2 426 199 Tu 1 . - CDS 465365 - 466561 803 ## gi|257460902|ref|ZP_05626003.1| hypothetical protein CAMGR0001_1671 - Prom 466581 - 466640 8.8 427 200 Op 1 . - CDS 466664 - 467098 309 ## CFF8240_0648 hypothetical protein 428 200 Op 2 . - CDS 467095 - 467412 357 ## gi|257460904|ref|ZP_05626005.1| conserved hypothetical protein 429 200 Op 3 . - CDS 467409 - 468638 1126 ## CFF8240_0671 hypothetical protein - Prom 468722 - 468781 1.7 430 201 Op 1 . - CDS 468791 - 468976 56 ## gi|257460906|ref|ZP_05626007.1| conserved hypothetical protein 431 201 Op 2 . - CDS 468976 - 469374 476 ## gi|257460907|ref|ZP_05626008.1| hypothetical protein CAMGR0001_1676 - Prom 469399 - 469458 5.4 432 202 Op 1 . - CDS 469467 - 469688 204 ## gi|257460908|ref|ZP_05626009.1| hypothetical protein CAMGR0001_1677 433 202 Op 2 . - CDS 469685 - 470368 732 ## gi|257460909|ref|ZP_05626010.1| hypothetical protein CAMGR0001_1678 - Prom 470498 - 470557 8.1 434 203 Tu 1 . - CDS 470580 - 470816 316 ## Arnit_1914 hypothetical protein - Prom 470837 - 470896 3.4 - Term 470856 - 470906 4.6 435 204 Tu 1 . - CDS 471003 - 471398 546 ## CHAB381_0257 putative host-nuclease inhibitor protein Gam - Prom 471548 - 471607 5.3 436 205 Op 1 . - CDS 471632 - 471982 267 ## CHAB381_0256 hypothetical protein 437 205 Op 2 . - CDS 472047 - 472817 980 ## gi|257460913|ref|ZP_05626014.1| hypothetical protein CAMGR0001_1682 438 205 Op 3 . - CDS 472837 - 473145 401 ## gi|257460914|ref|ZP_05626015.1| hypothetical protein CAMGR0001_1683 439 206 Op 1 . - CDS 473285 - 473506 87 ## gi|257460915|ref|ZP_05626016.1| hypothetical protein CAMGR0001_1684 440 206 Op 2 . - CDS 473590 - 473865 397 ## gi|257460916|ref|ZP_05626017.1| conserved hypothetical protein 441 206 Op 3 . - CDS 473902 - 474063 151 ## CHAB381_0426 anaerobic ribonucleoside triphosphate reductase - Term 474083 - 474109 -0.7 442 206 Op 4 . - CDS 474128 - 474310 193 ## gi|257460918|ref|ZP_05626019.1| hypothetical protein CAMGR0001_1687 443 206 Op 5 . - CDS 474321 - 475214 1021 ## gi|257460919|ref|ZP_05626020.1| hypothetical protein CAMGR0001_1688 - Term 475239 - 475290 1.2 444 207 Op 1 . - CDS 475292 - 476620 1071 ## Spico_0833 hypothetical protein 445 207 Op 2 . - CDS 476621 - 477226 682 ## CHAB381_0251 hypothetical protein - Prom 477430 - 477489 3.4 + Prom 477435 - 477494 7.8 446 208 Tu 1 . + CDS 477524 - 477724 244 ## gi|257460924|ref|ZP_05626025.1| hypothetical protein CAMGR0001_1693 + Term 477737 - 477777 2.3 - Term 477620 - 477661 0.1 447 209 Tu 1 . - CDS 477737 - 477877 105 ## gi|257460925|ref|ZP_05626026.1| hypothetical protein CAMGR0001_1694 - Prom 477967 - 478026 8.4 + Prom 477902 - 477961 7.9 448 210 Tu 1 . + CDS 478014 - 478715 754 ## COG2932 Predicted transcriptional regulator + Term 478732 - 478773 1.1 449 211 Op 1 . - CDS 478848 - 479756 642 ## gi|257460927|ref|ZP_05626028.1| conserved hypothetical protein 450 211 Op 2 . - CDS 479778 - 482234 3193 ## COG0178 Excinuclease ATPase subunit 451 212 Tu 1 . - CDS 482417 - 482623 390 ## COG0178 Excinuclease ATPase subunit - Prom 482647 - 482706 7.6 + Prom 482523 - 482582 5.0 452 213 Tu 1 . + CDS 482699 - 483859 859 ## gi|257460930|ref|ZP_05626031.1| conserved hypothetical protein 453 214 Op 1 . + CDS 483964 - 484443 429 ## gi|257460931|ref|ZP_05626032.1| putative lipoprotein 454 214 Op 2 . + CDS 484517 - 485791 1276 ## COG1533 DNA repair photolyase 455 215 Op 1 . + CDS 486177 - 486845 772 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 456 215 Op 2 . + CDS 486832 - 487332 287 ## gi|257460936|ref|ZP_05626037.1| hypothetical protein CAMGR0001_1705 + Prom 487339 - 487398 2.1 457 216 Op 1 . + CDS 487421 - 487936 457 ## gi|257460937|ref|ZP_05626038.1| dihydropteroate synthetase 458 216 Op 2 . + CDS 487923 - 488972 917 ## CCV52592_1357 sulfate/thiosulfate import ATP-binding protein CysA (EC:3.6.3.25) + Prom 488991 - 489050 3.0 459 217 Tu 1 . + CDS 489073 - 490089 501 ## CHAB381_1200 hypothetical protein Predicted protein(s) >gi|257441660|gb|ACYG01000027.1| GENE 1 1 - 322 411 107 aa, chain - ## HITS:1 COG:FN0659 KEGG:ns NR:ns ## COG: FN0659 COG2011 # Protein_GI_number: 19703994 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Fusobacterium nucleatum # 1 107 6 112 233 86 47.0 1e-17 MIEWIQNFFSGVIPKLLLNATLETLYMTFVSTALAFILGLVLAIVLILTRRGGLCENRIV YAVLDVVINTLRSFPFIILLIVLFPLTKLLVGTSIGTTAAIVPLTIG >gi|257441660|gb|ACYG01000027.1| GENE 2 587 - 2422 1884 611 aa, chain - ## HITS:1 COG:Cj0546 KEGG:ns NR:ns ## COG: Cj0546 COG0043 # Protein_GI_number: 15791907 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Campylobacter jejuni # 13 611 4 600 600 674 55.0 0 MQSFDEILNGNFWIKRLYENGLLREVKEQIGTELEIAHASYIEVKRERSQALLFTNVRNA QGKQMPPVLSNIFGSSSALNLILGREPDEIAAEIESLLKPKRPQNFSEKIDFLAHLISLR KIFVKRLSGRGECQHVAHLGADVDLGELPVLKTWEGDGGEFITMGQVYTKDLNSQTQNLG MYRLQIYGRDRLGMHWQIHKDGAGFFDEYRKAGRKMPVSVAIGGDPLYIWCGQAPLPKGF FELLLYGFIRRSPARLVKSLTNEIYVPEGADYVIEGFVDPAISEPEGPFGDHTGYYTPVE PFPVMEVSAITHKRAPVFHATVVGKPPLEDKFMGYATERIFLPLFRTSAPDLIDYKMPEN GVFHNLILAKIAVRYPAAAKQIMHAFWGVGQMSFVKHAVFVPQDAPSLDEYEALTKYVLN RIGAHSLVFSEGVCDQLDHASPNSCFGGKLGIDATVDLSSPPPQILSDEELLAKFQSEEP AILALKQHFCDTKNPLVLINIDKKEFVERSWRRLLKFSENFKILIFTDARNDASNLYMSV WRIVNSIDALRDVFVTQDDRICIDATSKHEWEGYTRRWPQETLCSREVVVSLIERGIVQD EPELFKKFEIF >gi|257441660|gb|ACYG01000027.1| GENE 3 2432 - 3421 1106 329 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0726 NR:ns ## KEGG: CHAB381_0726 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: Porphyrin and chlorophyll metabolism [PATH:cha00860]; Metabolic pathways [PATH:cha01100]; Biosynthesis of secondary metabolites [PATH:cha01110] # 2 323 1 323 330 256 41.0 9e-67 MVNLLNLTRIVNGTMLNNPAISAVESFAIEPAKVAKKSAFIALGANERDVRTAIDNGAYA IIFDNNFKPLNDEIAFIKVENLCSALVRLIKFLGETWRHGFVLINEVQSEILRYTSVPKN LMFAPRSKGELFISLLNAKEKNTYFTTDSELLQSLGISPVRVPASDDFRLLYGGSIFYSS FVFGGLYYSNLIFPQLFLPELCGVIEYLSRKNIPFKFQSLSAFGHFEPIFVDRFFNVSSL GGSYRAFIAESDPELFAREAEFLRAKFREKIIVCASWEDRLDGVKIDFRFNKLSALKSLP EFHYALVFAEKSAILQLLNQKPQEKNLFF >gi|257441660|gb|ACYG01000027.1| GENE 4 3421 - 4269 346 282 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKALARKASKLAICGAVGLCAQKSGASDKILNLCRDSSLAAKIGAGGLVCAAPLALKLGA PVVLEFAARKILTLGVCELSKFAALKCAKLGARAVVRLFSRTDKLTDERTKKRASADGES SNASAAPRRKRTAGVSSANAKKDASLSKSTSAKRDVATKSAPAKRSPLAKKPAPIAKTAS TTKNIAASVASISTAKSASVAKSASVKNAVRNKISAASTKVAPAKSMAQNVKSRRTAKNT TALAVIAAKDAAALGATSASTAKQSRRAAKSALPKSSAVGKS >gi|257441660|gb|ACYG01000027.1| GENE 5 4272 - 6269 2201 665 aa, chain - ## HITS:1 COG:Cj0838c_1 KEGG:ns NR:ns ## COG: Cj0838c_1 COG0143 # Protein_GI_number: 15792176 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Campylobacter jejuni # 3 508 2 507 525 699 62.0 0 MKKYIMTPIYYVNDVPHIGHAYTTIIADTMARFYRLQGHEVFFKTGTDEHGQKIEEAAAK HAQSPKQYADGVSAKFKDLWDEFDISYDMFSRTTDAAHEAAVQNVFRKMYEKGDIYKGEY EGNYCVSCESFFPSAQLIDGEYCPDCGKKTKILKEESYFFRLSAYAERLLKWYEDEKCIL PLGKKNEVISFVKSGLKDLSITRTGFDWGVKIPPELNDPKHVIYVWLDALMDYLSSLGFC AGGERMEYWSDALHIVGKDILRFHAVYWPAFLMSLGLNMPRSIAAHGWWTRDGKKMSKSL GNVVDPREVANAYGLEQFRYFLLREVPFGQDGDFSQKAIINRVNSELANELGNLLSRIVG MSAKYSDYVINSKDVMKFFTAEIKEANSYLSAAISALEEVATNRYLEELWRALALANASI AKYEPWNLIKNGEQAKALALVALVANILAKVAVLLSPAMPKTAARIADTLGFEISTPLYE KLVLRGEILDFKAKPCEPLFTKIDHELMPKADYDRLDGAANSASCSGADAAAKGAPSLNA NVTGSSATAQEAQGEATEAQIKIDDFKKCVIKVGTILECENIEGSEKLLRFMIDLGEERP RQIISGIAKFYDPAALIGKQICVLANLKPAKIFKHSSEGMILSAEDGSLTLLSTLAPVKN GAIVG >gi|257441660|gb|ACYG01000027.1| GENE 6 6316 - 6999 495 227 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0837 NR:ns ## KEGG: CHAB381_0837 # Name: not_defined # Def: N-methylation # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 214 1 207 232 204 52.0 2e-51 MKKAFTMIELIFIIVVVGILAAVAVPQINRNSLVEAADQVAAHIRYTQQLAMNDNKFDPD DPNWFKRFWRIQFTDQGAPGSAAGWRYNIYWDNGDFPGSNGQPNSLNSMAADPQNPNKLL TSGFARQPANTDGARMNQKLNLGATYNIRNIQFTNCGNRNNHTISFDSYGRPMGQLANSN VPYDRLFVGQCVITLTNDARETASITIEPETGYVRYTLNSNTGTAAQ >gi|257441660|gb|ACYG01000027.1| GENE 7 7027 - 8253 1135 408 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0835 NR:ns ## KEGG: CHAB381_0835 # Name: not_defined # Def: putative integral membrane protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 408 1 402 404 366 51.0 1e-100 MRVKKLYQNEIFVIFIMCLFQGIFLLYAISNLSISYYEAEIFYDKKSLVSLIANLSCEIF GRNDYALRVPFILIHFANAAMIYKISKFILKRRFDMVVATALFMALPASMSSAILLNPAG IIVFFTLLAIYFAKSEYNIALFVLLSVCALIDRAFFMLYVGFGIWALYTRKKELLLLCIA LFSFSVIFYDVSSEGKPKGYFLDTVGVFAGAFSPLVFLFFIYTIYRIWIKEEKSLLWFIA TSALCLTMLFSLRQRVPLEMMLPYCVIATPLIIRVLFNSYRVRLPKFRTFHKIAVGVTLV SLAVSYFAVIFSDVMYEAMFANKPQRHFIYKFDVARQLASELKNRGVKSVSCEDERLCLR LKFYGLPSGDSAFIYADKPEYVSDHKNSIQNIDIYKRGVRIAKFYVKI >gi|257441660|gb|ACYG01000027.1| GENE 8 8365 - 8814 657 149 aa, chain - ## HITS:1 COG:Cj1370 KEGG:ns NR:ns ## COG: Cj1370 COG2236 # Protein_GI_number: 15792693 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Campylobacter jejuni # 1 143 1 143 147 179 56.0 2e-45 MRFYSFDEMDRDARVIAKQVRDEFMPDAIVAIARGGLTFGHALANALDMRTIFSINSIHY ADTKKLDTIDVFNVPDLELYKRVLLVDDIIDSGDSMVEIKRVLLEKFPQIELKTAVIFYK PKALIQPDFKISKTDEWINFFWENYTIEE >gi|257441660|gb|ACYG01000027.1| GENE 9 8830 - 10125 1230 431 aa, chain - ## HITS:1 COG:jhp1102 KEGG:ns NR:ns ## COG: jhp1102 COG2252 # Protein_GI_number: 15612167 # Func_class: R General function prediction only # Function: Permeases # Organism: Helicobacter pylori J99 # 4 429 3 433 435 414 56.0 1e-115 MEKFFHLAAAKTSVRQELIAGLTTFLAMIYIVPVNANIMSIAGMPFDALVTATALITIIA TLFNGLFANTPVALSVGMGLNAYFTFALCVDAKMPWQSALGIVAISGALFTVLSFTNFRV WVIKSIPLDLRRAISAGIGAFICFIGLKQMGVIAPSQATLVTLGNLKDLNVLLGILGLAV VLVLFVLRIKAAFILSILITSCVAWVAGISPAPHGIVSAPSGITPIFAKLDIPGALKLAF VPFIITFFVTHLFDSIGTLTGVGNRAGLFGENSKDGMKKLSRNLTSDAIGSVAGAVIGTS TVTAFAESASGVEAGGRTGLTAVFCAIFFVLTLFMLPLFKAIPANAIYPILVMVGVLMFS ELGKIDYGDAGILIPAFFIVFLMPFTYSITNGLSFGFIAYIVVRLAQRRIKDLNFGVLTL GAISVLVFLMH >gi|257441660|gb|ACYG01000027.1| GENE 10 10144 - 11226 1083 360 aa, chain - ## HITS:1 COG:Cj1368 KEGG:ns NR:ns ## COG: Cj1368 COG1060 # Protein_GI_number: 15792691 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Campylobacter jejuni # 3 359 4 354 354 489 66.0 1e-138 MEILEKLQSGERLNYEDGVKLWDLDLFDLGKFAFAIRKEKNGKNVYFNANRHINPSNLCA DTCKFCAFSAHRKNENAYTMSDDEIMRIVDETVARGTKEIHIVSSHNPFVTPQQYLGIFK AIKQKYPLLHIKAMTAAEIDYWRRKWKMSYEETIGLMMQSGVDSMPGGGAEIFDEDVRDK ICKGKVSSEQWLRIHSLWHARGRQSNATMLFGHIESRAHRIDHILRIRALQDESLSRANG GGFNAFIPLVYQRENNYLDVKGFLGSVEILKTIAISRILLDNVAHIKAYWATSTLSLALV AQDFGADDLDGTIENESIQSSAGAGSKKGQSKRDFIDMIGTAGFVPVERDSLYNQIEIYE >gi|257441660|gb|ACYG01000027.1| GENE 11 11368 - 13185 1875 605 aa, chain + ## HITS:1 COG:Cj1366c KEGG:ns NR:ns ## COG: Cj1366c COG0449 # Protein_GI_number: 15792689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Campylobacter jejuni # 1 605 1 598 598 818 67.0 0 MCGIVGYIGNAEKKKIIINGLKELEYRGYDSAGLAVMDESANIKYFKAVGKLNNLEEKMK DFTSQGFGVAIGHTRWATHGKPTELNAHPHFGDFSFVVHNGIIENYIELKDELEADGVKF LSQTDTEVIVHLFEKNFKASNDAFKAYEATIKRLKGAYATLLITKAAPGEIFFAKNAAPL IVAKNDKNEIFFSSSDAPLIGLANTAAYLDDQIYGVAKLGQIDVFKNSKPHNCAFSELPK DKGYAQKEGFRFFMEKEIYEQAQVVTEAMMGRVIKGGKIKFDELDAAMFEGIDEVVLCAC GTSYHAALVSSYLFERIAKIRTKVEVASEFRYKEPFLNKNSLFIVISQSGETADTLEALH IAKKAGLRTLAICNVDNSSIVRMAGSVILTRAGIEKGVASTKAFATQVMVLWMFVVYLAN LREVISARTNSAEISAMLHIPQILKIKDGLQDKIYRMSKHYLHGHGFFFIGRDIFYPLAL EGALKLKEISYLHAEGYPSGEMKHGPIALADSNLFTVALMPKHLLYEKTKSNVEELAARD AYILAISPEEPEIADDFIKTSEQSHAMSEFFEMMIILQILALEISVRLGNDVDMPRNLAK SVTVE >gi|257441660|gb|ACYG01000027.1| GENE 12 13246 - 14379 908 377 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460343|ref|ZP_05625444.1| ## NR: gi|257460343|ref|ZP_05625444.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 377 1 377 377 655 100.0 0 MRLIGFIRGENVIVATGGVEYSYEMLGERDPSLTDGDEVSFDTLASSAINIKRVEGSKSK DRVAQKVAPQPKESAKQNDEIFGDKNSAENNISETPSFQSSTENIANDISAVKETKVAKK FNKFKFSRKAKPTSAKKPKFFGFEFVQTDDLRTTQSVESKIYTSSIRKEGLKSIILPIVP IVIILIFRSQIASIFLSFSQIEAYVNQDTVYMVMDLLIFLSFALFYLLPLNRAINLLSIA THDQYPMRQMANYNVFIILCVISTILQDKSLGLDEFEQIFICGVIGFGLISFYYKFKAFA FMFFKTAGSILFAPALLVELAAIIFIGIGDRYTGASMKFMELTGLFFASTAWRYIIIFIV MSPLYFLGFCMIRRIKK >gi|257441660|gb|ACYG01000027.1| GENE 13 15059 - 16225 1284 388 aa, chain - ## HITS:1 COG:Cj1010 KEGG:ns NR:ns ## COG: Cj1010 COG0343 # Protein_GI_number: 15792337 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Campylobacter jejuni # 1 383 1 371 373 552 69.0 1e-157 MEFQIDGADGAARACTIRTAHSTIRTPVFMPVGTVGAVKALDATDVAGILDAQIILANTY HMYLRPGSRVVAEFGGLHGFTKFPRSFLTDSGGFQAFSLRANTKNDEGGIKFKSHIDGSM HYFTPRSVLDTQYELNSDIMMILDDLVELPREPGALSSDDRSRLKKRIDLSVARTIKWAR EAIDYHEAMKSRGLHTHQNIFGIIQGGTDPQARKFCAEALCEMSFDGLAIGGLSVGEKNE LMYETVEAMMPYVDPARPRYLMGVGTPEDLVENVARGVDMFDCVMPTRNARNGTLFTSFG KISIKNASFISDCDPIDPHCDCYTCKRFSRGYLNHLFRARELSFYRLASIHNLHYYLRLA ADMREAIVHGRFAEFRREFYAARSGARD >gi|257441660|gb|ACYG01000027.1| GENE 14 16412 - 18172 1454 586 aa, chain - ## HITS:1 COG:Cj0008 KEGG:ns NR:ns ## COG: Cj0008 COG1479 # Protein_GI_number: 15791407 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 1 586 1 580 583 619 57.0 1e-177 MAGFHPPIKIAEAIREIETDRYLIPAFQREYVWSGKQVERLFDSIMRGYPIGSMLFWKVR SESAGQWKFYSFLRYFREWFHTHNEYKPTKSINEFSAILDGQQRLTSLYLALCGEYHTHI PYRKWENTDDKFKICEFYFNLTANQEPKKDNVEYEFLWLEKAETGSKTIYTDKFGQKWFR CKDIYPREHGKSKALKIQQENPLSPLSNDEFEKLNLFENIIFSENIINFYQEDDPNPEKA VNIFIRINSGGTHLSYSDILFSYAIANWRQKDARKEINELVDFINNSKGFSISKDLVLKA FLYLYHENIKFDIGSFNNGFIENIEQQWDSIKMAFHSVFDLLENFGFNAQTMSSNNAILP VLYYVYHKNLASSIVHGTGQKQTREVIRKYLLRATLFKPFGGSADSVLTATRKVFKKDFD GKVFFDENIDEFPLEGIEKSYRYSNIIDDGFLQDLMLYRKNSPEAFAVLSILYPNLDTKN NFHKDHLHPESRYKEYKKAMKENKKECYDFSMYDALPNLQLLDANENMAKNDKSLEEWVE VECRNKDKSKFLKDHLIPDVDLSLDNFNEFFEARKELLISKLKELI >gi|257441660|gb|ACYG01000027.1| GENE 15 18227 - 18535 304 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460347|ref|ZP_05625448.1| ## NR: gi|257460347|ref|ZP_05625448.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 102 25 126 126 176 100.0 4e-43 MGITALTALNMNSRMSQLHKISGAVMLASAIWHASLYGSPYSEFLQNRKAKALALRNEDL DFITSNMTDVVNVASDENMSSDLGTTKIAPKKRHRTRRNTKN >gi|257441660|gb|ACYG01000027.1| GENE 16 18597 - 20678 2209 693 aa, chain - ## HITS:1 COG:FN1190 KEGG:ns NR:ns ## COG: FN1190 COG2217 # Protein_GI_number: 19704525 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 5 692 10 731 735 327 30.0 6e-89 MQNFKILHETKSRLRIKVAGFKGLDTSALQKAAARLEGVTEARFNAKIGSLILKLDAGID RVGILKQLEVLNLSELKSIIPANHKNLPSKNEFILALLALGGNLIFRTSPLARAFSIVAC MPILKEGIKESFRHGLTSKGLEAAAVGISLARGDIFAANSTNAMLALGEYMEESTVYKSD DLIRELARPDIAEAWVEIDQNGKKTEVKIATSKLKVGDIVVVGAGDVIAVDGHVVSGEAM INQANMTGESVAVKKSRGDSVLSGTIVEEGRIRIWAENVGENTSTQRIKHYITASLNERS SIGMHTTHLADKLVPVTFGLAGVSYLINRNFMSVASVLQADYSCALKLPTPVAFKSSISK AGKNGILIKGAKALESLASADTFVFDKTGTLTYGNLEVAEIISFDGRFSKNDILNLTASA EEHYFHPVAEAIVDAAKKHGFIHKHHDEVEFVVAHGVKTSIEGKKLIIGSRHFLEDDEMI SFAAHEQTIDLAMQKGLALLYIAFDGRLLGLIGLRDEVRANARAVITRLRELGAKQIVML SGDVSSKARTVAKKLGVDRYYGELLPTQKTEILKQLKAEGRKVVFVGDGINDAPSLMKAD IGISMLNGAEIAKASAQIGLLKNDIEGVAQVKALANDTLRLVNRNFNATVGINSIILFLA TFGALSPVATALLHNGTTIGLLLNSIKGVKFEH >gi|257441660|gb|ACYG01000027.1| GENE 17 20682 - 21176 647 164 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0354 NR:ns ## KEGG: CHAB381_0354 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 76 164 40 118 120 65 48.0 1e-09 MSNPYITKKDLKEILDDYDFGDNKYASSSAGSFAGDEKLGGWAKWINERVNSAPFNSSAS SNNSDSKDSAAQSSSDVNSTQSSQNSTFGGIFNSLGGRQNANGLFGSNSFITGIALGAVA TYFLTDENAQKKLFKLIAKGTEMFQMGIEEMKERFEDAKAEMQE >gi|257441660|gb|ACYG01000027.1| GENE 18 21169 - 21471 387 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460350|ref|ZP_05625451.1| ## NR: gi|257460350|ref|ZP_05625451.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 100 1 100 100 145 100.0 9e-34 MNRSLTTQRSPLDHVLSGAIAGAIGGCAVELVKAKEGKSKSKAIRDALDIALSGGIIGGG AIYSANKLVQGEYLRAAAGVAVCVGALVAGRNFILKVGNE >gi|257441660|gb|ACYG01000027.1| GENE 19 21590 - 21970 338 126 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460351|ref|ZP_05625452.1| ## NR: gi|257460351|ref|ZP_05625452.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 126 1 126 126 145 100.0 8e-34 MPIPFLAGFALGCAAVYAYNNRDKIKEGANKIVSSKSVEELKNSVKGGAEKLSKKSKEIF AEAKEGLDDVAEAVKSKRKSGGKKAATSSASTEASAAKKTRKNRDQNRDLKELKNPPRAL RLAKRR >gi|257441660|gb|ACYG01000027.1| GENE 20 22066 - 22434 419 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460352|ref|ZP_05625453.1| ## NR: gi|257460352|ref|ZP_05625453.1| hypothetical protein CAMGR0001_1119 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1119 [Campylobacter gracilis RM3268] # 1 122 82 203 203 210 100.0 3e-53 MPPENGSEALAAKGMNEFLASALLIEKSSMMFYVDLINSCKNAEFKELLYKAQAVSYNEI LPILKELNSKCEVDSNSLNLTDLLNEILKNPQELERIFQKYDLQNILNSAFYNLIKGILH KN >gi|257441660|gb|ACYG01000027.1| GENE 21 22674 - 22991 370 105 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1384 NR:ns ## KEGG: CCC13826_1384 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 98 1 98 107 92 51.0 4e-18 MKINHNDILEFHKYFSKISHSKGRIRIRVSPKIRELRDSVSEESLKAKIAAIRGIKEYKF NSLIGSLTIHYDENIFPMHLWEQFLSGISSPELVALVNSNIEAIS >gi|257441660|gb|ACYG01000027.1| GENE 22 23057 - 23584 400 175 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 4 173 2 187 194 158 51 3e-37 MVKIGVLTISDRASGGVYEDLGGKEIIAVMDDWLTCEKQYFYEIVPDELELIKDKLIYLC DEAGCDLVLTTGGTGPAPRDVTPEATEAVSEKLMPGFGELMRAESQKIVPTAILSRQIAA IRKKSLIINLPGNPKAIKECLLPVFPAVPYCIDLMGGNYITADENKIKIFRPKRK >gi|257441660|gb|ACYG01000027.1| GENE 23 23614 - 24630 420 338 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 329 252 625 636 166 31 4e-72 IFIDEIDAVGGKRGIGRNDEREATLNQLLTEMDGFEENSGVMVIGATNKINMIDDALLRS GRFDRRVFIGLPNYKDRIEILKIYLEGKRCSANINKVSRLCVGFSGAGVATLVNEAAINA LKRGSDTIELSDFENVRMRVFYGVQKSRILTEYEKEIQAFYQGAKALSAYWYSFDFEKIE LLNDKFLNEDFEIESKTQILNQIKVLLSGMAALQIHKNDAFSNSASDVKQAIALAQKMVF ELAMGDSFTPSAQSVNKILQDCYDEVSEIIRTMQDKLNQISKQIFVYEFITFEDVQKICE SDGVEQEGVSAQEQDLQKSKEDSESSEEKPQDGTLNFD >gi|257441660|gb|ACYG01000027.1| GENE 24 24555 - 25379 730 274 aa, chain - ## HITS:1 COG:Cj1005c KEGG:ns NR:ns ## COG: Cj1005c COG0465 # Protein_GI_number: 15792332 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Zn proteases # Organism: Campylobacter jejuni # 14 250 6 247 538 196 44.0 3e-50 MEILHKIKKSKLNIILIFLVLLIVLLSIVYFKDDSRYITEREFSELVRKDQIKRAHIEDG NLNFTYDGKRYKILTDIVNLKELSNHALITKEEDSGSGGISATLVIFTFAFFLFVYYFET VLARRRRMDGAARQSASAGGDLGDLSPSVSDVRFSDVAGISEVKDELIEIVDFLKNPAKY RNFGIKLPKGILMIGEPGVGKTLIAKAVAGEADVPFFYQSGASFAEVFVGVGARRVRELF AKAKSCAPAIFLSTRSTQSAASAVSDATMSEKRR >gi|257441660|gb|ACYG01000027.1| GENE 25 25363 - 26595 371 410 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 1 392 19 439 462 147 31 7e-34 MKIYFKTFGCRTNIYDTQLIKSNLKSGEITHDEQGADVVVINSCTVTNGADADVRNYVNK MNRLGKKILLTGCGAVSRGEELYKNGAVFGVFGMSQKEKIDEFLGSESKFYDIGDLSSVE KNLVSDYEDHTKAFIKIQEGCDFNCSYCIIPSVRGRSRSSSEDAILKEAVSLVANGFSEI VLTGTNIGSYGKAAGTSLGALLQKLGGIRGIRRIRLGSIEPSQIDASFREILSEPWLERH LHIALQHTSQKMLSIMRRRNSALRDLELFCELAERGFALGTDFIVAHPGESEELWLEAVE NFKKFPLTHLHAFIFSPRQGTASASLKGRIDGKTAKARLKMLQNITALNNYKFRLSHKVP LNVLIERKNGEFYEGYDQFYDKIWIESDEDLSKKWMEIRDYEVKFDGNFA >gi|257441660|gb|ACYG01000027.1| GENE 26 26592 - 28301 1651 569 aa, chain - ## HITS:1 COG:HP0284_2 KEGG:ns NR:ns ## COG: HP0284_2 COG0668 # Protein_GI_number: 15644912 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Helicobacter pylori 26695 # 216 523 1 308 326 314 50.0 3e-85 MRALAAIFLIFNLAFCEANSTLSAAHTRLESNASSAASEKKDENSKLSASLKDQIRVIDD EIKNNIWISRFSNFIGYQNLQKQSSQLEAELKKSAGTDKIAEIQKRLRAVKEQLILLKEY EKSPFLDIIAMPETPEPARITNPFSIISGFSTIRNLQAQKMEQKNAIENIKALIDKLEAK RALYERLMQIDTDASAAAELKSLDYELGEFSSAYEIAQTTYDVYEKKINSQIAVQTADIK AQVKRAGNIAVWILVVIALSFFCKVVAKKYIKNDENFYIVNKIINVLNFTLIALILLFSY IENMTHFVTVLGFASAGLAIAMKDMFMSSLGWLTIVLGGSFRVGDRIRVHKNGETYVGDI IDISVLRMTLFEDVTLTTWKENKRAGRVIFIPNNYIFTDLISNYTHSGLKTVWDGISILL TFDSNHKKAMYLIKNIVRKYSKGYTDIAKKQMGKLRSQYSIKNPNVEPRIFSFFEPYGIE ISVWYMTNSYATLGLRSNISAEILDALRSEPDIKIAYPAYTLFNGKNYMAAGENFAAQDL GFEQQGSQNLNAAAQGAGFATGSGSGSEI >gi|257441660|gb|ACYG01000027.1| GENE 27 28298 - 29329 996 343 aa, chain - ## HITS:1 COG:Cj1008c KEGG:ns NR:ns ## COG: Cj1008c COG0337 # Protein_GI_number: 15792335 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Campylobacter jejuni # 1 343 1 351 351 385 57.0 1e-107 MKIDLNLGKKYSVFIDELQEIKLKGKVAIITNPKVGGLWLDFLLQRLDCEQKFIITIPDG EEYKNTASVEQILEQLFSSKLDRKSTLIALGGGVISDITGFCASIYERGIDFINIPTTLL AQVDASVGGKTGVNNRFGKNLIGSFYQPRVVYCESKFLSTLPAREFAAGVAEAVKMAVCF DGELFKFFETHDLKSADEISHIIARCVEIKASVVERDERESGVRAVLNYGHTFAHAIEKI TNYKKFLHGEAVAIGMVMANTLARRLGKLSGEQEERIRKVLQKFALPIKFHVEDAAEFYE LFFLDKKSENGKIKFILPDGIGKFYASKEIAKDEVIAALKEFE >gi|257441660|gb|ACYG01000027.1| GENE 28 29372 - 30790 1219 472 aa, chain - ## HITS:1 COG:Cj1009c KEGG:ns NR:ns ## COG: Cj1009c COG3400 # Protein_GI_number: 15792336 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 465 1 464 466 284 34.0 3e-76 MKQVLIIASGKFARHFLSKVCKIKDVIRSYRVIAKNMDAVPSELENESNFSVEIFDPTSI ERLRVVLAEEEFDRCIVIMEDEFDTKVTLENLKTLASDLELYVADFWGLLRENKNEAHVK IVNTLALNSSRFIGFLPDSPVFADNIGLGRGEIMEVKVPVGSSFAYKKISTLSNAKYQIP MIYRHNNYIVTTPGSRIYPNDTILVVGEPSALRVVFAEVKKQSGQFPSPFGLNIFALIDM KKMSDDEIARTVRALEFLDLHIRNHKIYLRILNPLLNDAFSELKALCERDKFEILINYSG ELNLKRDVSENKAGLVVCSSGVFEAKKAALKALEIPVLSLGEGELKDVRKSVVLSAGERL REESSIVFDISSQLGLDVYLYIFGESERGEFAQSYVSLSKLFKQSLFVISCERQNPILAL GSERDLLQFVPFNDRILARKLTSIFNQDLDQMYFKLGKNHQIFVPSDYGYEK >gi|257441660|gb|ACYG01000027.1| GENE 29 31081 - 33330 2738 749 aa, chain - ## HITS:1 COG:RSp0414 KEGG:ns NR:ns ## COG: RSp0414 COG1629 # Protein_GI_number: 17548635 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Ralstonia solanacearum # 64 749 95 746 746 155 24.0 3e-37 MKFKISLAACMCLLCSSLAAAQSGGNSAPEKSQNMGVIEVNSVGDNISESGIDEGFLSKN VQQGMLAGKRALDLPYQINTISKEIMNHQGVTGYEEAVKYFPSAQIQMRGGATVGRPQTR GFEGSVVGNSFWDGFYTISTTAIPMAMFESFQVQNGVAGSLYGAQNPVGIFSYTRKRPVK DQYIIWSDYMSRSNLGLGLDLSDKFEKFGYRTVFYGSNGDRQPKGSNLQRRLASVTMEFY PTGDLTFETAASYYEHNTKGFAGQFALGVRDGKIVDGMELPKAVDSSKRGLGQSFGGMHL KTTTASAKFKFTPTDKWYLEGGFQFQRADRDTHGVVNYILPSTHPQYTKPGDYKTRHSGG ATAAYRFDLPSGYLKANTQFNTGDIEHDFSVQTNGYHWTQDRYKNASTNYTSPTIGNIYD PKILNYTGARRGSGLYHYAVLDMYNVSVLDDITINDKFDVMLSASKAWMRQESYNARQQR LVKAYSDSGYSWASSLIFHPIEDASIYYTYADSLQQGSTYVYNSGPHNGEVSSTSPYRSK QHEIGAKIRVADMIDFSVAYFDIRRPIAYLNSSTGIYGINGEQRNRGFEFMSGGRITQNL SVLGGFTYIDPKMHNVSIAGANRKVANGIPKLNANLMLDYVIPGTDKLAISTNFHYTSKM YLDDLNTQHTPSFFVTDLGIRYTSERLLGDKTTLRFNVNNVFNKKYWAGMYPASADGAGG LNVTSVLGSANGVTLGESRSFMLSAEIKF >gi|257441660|gb|ACYG01000027.1| GENE 30 33557 - 34390 799 277 aa, chain + ## HITS:1 COG:Cj1212c KEGG:ns NR:ns ## COG: Cj1212c COG1295 # Protein_GI_number: 15792536 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 15 273 1 260 268 183 42.0 2e-46 MKKLIPALKQAQNRLKNFFRLYDTELMHHASSLSFHTILALLPVLMVSLSVFMQLPSFKG YYDKIMGFIFSNFLPANQASMAHYIEEFMANGLSLGVTGFCAVLVTSVLFFGDFEAIIAR ISHSPERSFFKSLSTYWTLMTLAPVGLGASFYISGELQELLNKTEFTSWINLLKILPYLI VWGIFAITYATAINREIRAKAVLASSLVASILWWLSRLVFAQYVFYNKTYLSIYGSFSVA LFFFLWIYISWIFYLYGVKFCVFLDAKFKRGGERQSA >gi|257441660|gb|ACYG01000027.1| GENE 31 34577 - 35062 476 161 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460363|ref|ZP_05625464.1| ## NR: gi|257460363|ref|ZP_05625464.1| hypothetical protein CAMGR0001_1130 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1130 [Campylobacter gracilis RM3268] # 1 161 1 161 161 306 100.0 4e-82 MAFVAEYISKEDLEKYDILSNMNELLMKHNYTYPIQDNDTDWMNWVIDRQRDAWLIHVCL ASMPDPRDGYTGEDIWLFHYKGRDIELDIRRIYDETTSKYFTENPFKIKYIFQSVNSDIG DISMDEIYEILNEALLEYGDDGINSRKFLPKEHEVVTFLHD >gi|257441660|gb|ACYG01000027.1| GENE 32 35137 - 35373 374 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460364|ref|ZP_05625465.1| ## NR: gi|257460364|ref|ZP_05625465.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 78 1 78 78 125 100.0 8e-28 MQKYPEVYSLEKSLAILEKYKDELSAEQYEQNRSIICNHAIEGMFANEQDIIDLIKVDKG EKTSDEIINEYKKEWGVL >gi|257441660|gb|ACYG01000027.1| GENE 33 35612 - 36367 705 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175501|ref|YP_001407903.1| 30S ribosomal protein S16 (BS17) [Campylobacter curvus 525.92] # 11 250 3 269 270 276 55 1e-72 MSYQKIALFSALFALILAGCSFRTAPPSRSSVGGAGKIGKNSPATMRPYKINGKTYYPEQ VSVGDTQIGIASWYGPNFHGKYTSNGEIYDMNGMTAAHKTYPMNTMVKVTNRDTGATATV RINDRGPFVDGRIIDLSKTAANLVGVFAKGTAPVKLEVVGFYGHTIAKGSPKATIVGGNF MVQIGAFRNRSGAQIYQRDYHGTAGYPAIIKEFSIDGAPIYRVFLSGFKSEDEARDFAHN GKFTGAFIVRE >gi|257441660|gb|ACYG01000027.1| GENE 34 36381 - 37379 842 332 aa, chain - ## HITS:1 COG:Cj0645 KEGG:ns NR:ns ## COG: Cj0645 COG0741 # Protein_GI_number: 15792005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Campylobacter jejuni # 85 288 84 293 372 159 42.0 6e-39 MKAIKFILLALLLVGEAFASQPGLMRANHDYILNQFGIENNESSKNVVAGIFRAINASDR KQFKHIVTSQSHNAYLVKSEVDNIEAPEFLLYLAMVESHLKNTVTSGASAGGMWQLMPAT AKNFGLRVDSAVDERRDPAASTDAAFSYILHLKQNFGKWYLALMAYNCGDQKLKNAIAAT GSDDLDRLLKSPALPNETKNFIKRIIKYAYIAQNENMRKILLFESEPWGLKRIAVAPGTK LSAVAKQIGISPSQMQDYNAHIKNGISPLNGKYFFYIPQSKYAEFVVNQGAFQAYEPRLK QRKPGRMLAGLANELSLKDKNEIALNNIKFNK >gi|257441660|gb|ACYG01000027.1| GENE 35 37376 - 38173 857 265 aa, chain - ## HITS:1 COG:Cj0644 KEGG:ns NR:ns ## COG: Cj0644 COG0084 # Protein_GI_number: 15792004 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Campylobacter jejuni # 2 257 13 267 271 304 57.0 1e-82 MIIDTHCHLDDASFDADLDAVIERATIAGVRSIIIPGADVADLDKACKISHARDNVYFAV GVHPYEIDSFDMEVLKRYADDPKCVGVGECGLDYFRLKQQESKETKALEISRQKDAFISQ IDLAAQLQKPLIVHIREANEDSFGILKDRAGDLCGGVLHCFNASKLLLGLSEYGFYFGIG GVLTFKNAKNLAEILPQIPQERLLIETDAPYLTPHPHRGERNEPAFTRLVVEKVAEILSL SVEEVEAITTQNACRLFGDKIKGEI >gi|257441660|gb|ACYG01000027.1| GENE 36 38299 - 39822 1403 507 aa, chain - ## HITS:1 COG:Cj0642 KEGG:ns NR:ns ## COG: Cj0642 COG0497 # Protein_GI_number: 15792002 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Campylobacter jejuni # 1 504 1 504 507 380 50.0 1e-105 MLERIYIKNNLGFCESELSFGPGLSVFTGISGAGKSVLIGAILAVFGLKECEAELIEADV EHKFDMENFGLINDTPNTFRVLKERSLRYFINSQSVSKKNLSTIAGEYVKFLGAKNAGEM SSDSLLKLLDFIAAKKDAAHAQSLSELQSAFVEFSRTKKQLDEILDQERKIEELKEFARF EIEKIERVSPKIGEYEELLQIKKKLSKKDKIEELWARAQGVFELERSVIEALSLSGLDSA FFEDAMNELRLKRESLNLDELENIDIEKILDRIEALSALNRRYGSVEEALATLEARKKEL EHYEQLSFEKTKLQAEFKRLSEGTAILAEKISEARKGAKKRLEDLINSYLKQLYMDGVEL SFKPAVLSERGTDEICVSLCKTEFKNLSSGETNRLRLAFIAASLELTNNGEGILILDEID SNLSGKEAMSIANVLVKISKFYQIFAISHQPQLSSKAASHFLVSKTNGKSSVRLLSENEK ITELARMISGETITAEALEFAKKLRQS >gi|257441660|gb|ACYG01000027.1| GENE 37 39816 - 40697 973 293 aa, chain - ## HITS:1 COG:Cj0641 KEGG:ns NR:ns ## COG: Cj0641 COG0061 # Protein_GI_number: 15792001 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Campylobacter jejuni # 4 290 2 286 286 247 43.0 2e-65 MESKNKIHENLKFAGLIAKKSEEIRPVAEEIREILKAQGIEPLMQQDSAEFLGFKPHTLA EILKKTNFLISLGGDGTLIGLARLLSDKNAFILGINAGTLGFLTDVQPSEFAKFLKEFLR GEYEIERPFLLEVILENGSGKIVRKTAFNDVVITRSHISSMAKIDAFLNRKYFNTYYGDG VIVSSAVGSTAYNMSANGSIVYPLCDVFCVTPICSHSLTQRPLILPKEYLASFKNVGSSE VSVVVDGQDVFDMAEFSSVSVKISHAKTNLIKRRSYDYFDVLKAKLRWGHGGC >gi|257441660|gb|ACYG01000027.1| GENE 38 40795 - 42549 1967 584 aa, chain + ## HITS:1 COG:Cj0640c KEGG:ns NR:ns ## COG: Cj0640c COG0173 # Protein_GI_number: 15792000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 580 1 580 583 910 75.0 0 MRSHYCTDLSKNDIGKSVTVCGWVNSYRDHGGVIFIDLRDRSGLLQLVCDPKDSHSAYEV ANTVRNEFVLKAVGKIRARGEGLENPNLKTGDIEVVVESLEIENPSKPLPFVIGDKSVNE ETKLKYRFLDLRAEGSFDKFKMRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLV PSRVYPGSFYALPQSPQLFKQLLMCSGFDKYFQIARCFRDEDLRADRQPEFTQIDIEMSF NTQYDVMRVAEEVLKDIFKSCGREIVTPFRHMEYKDAMELYGSDKPDLRYDMPFIDVADI FEKSSNEIFSNLAKDRKANRVKALKVEGGDLKFSKRQMQGFEEYVKKFGAQGLAFIQVKE DGLKGPLVKFFEKSELDELIKRCGLKVGDVVFFGAGKKKIVLDYMGRFRIFLANELGLID PNRLEFLWVVNFPMFEQNDDGSYSAMHHPFTMPNNPDEPDLEDITSIAYDVVLNGIELGG GSIRIHKADIQEKVFRLLKIEPAEQREKFGFLLDALSFGAPPHGGIAIGFDRLMMLVTGS SSIREVIAFPKTQRAQCPLTKAPSVVTDEQLRELGLRLHKKEQK >gi|257441660|gb|ACYG01000027.1| GENE 39 42546 - 43127 795 193 aa, chain + ## HITS:1 COG:Cj0639c KEGG:ns NR:ns ## COG: Cj0639c COG0563 # Protein_GI_number: 15791999 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Campylobacter jejuni # 1 185 1 186 192 233 67.0 2e-61 MKSLFLIIGAPGSGKTTDASMIAQMNQSIEHYSTGDLLRAEVASGSALGKQIDGFISKGN LVPLDIVVNAIVSAIKSSPKDFIIIDGYPRSVEQMNKLDEVLRGDDDVNLSAVIEVCVSE EVAKERVLGRARGADDNEEVFKNRMAVFSEPIEDIRKFYGDAGVFYSVNGERTVEEIVAD INAIIAAQIEKLG >gi|257441660|gb|ACYG01000027.1| GENE 40 43401 - 43757 426 118 aa, chain + ## HITS:1 COG:ECs2197 KEGG:ns NR:ns ## COG: ECs2197 COG3111 # Protein_GI_number: 15831451 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 2 115 1 113 114 71 35.0 3e-13 MVRKFLLSMALCAVAFGAGGFVPSGSAAQTQPLSVKEALKLRDDSFVVIDGKIKSQLKHE HYRFVDQNGDSIEVEIDDDVWRGVSVDENTLVRISGEIDKDFTKTTIDVKNIKILNSK >gi|257441660|gb|ACYG01000027.1| GENE 41 43767 - 44285 857 172 aa, chain + ## HITS:1 COG:Cj0638c KEGG:ns NR:ns ## COG: Cj0638c COG0221 # Protein_GI_number: 15791998 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Campylobacter jejuni # 1 172 1 172 172 254 76.0 5e-68 MDLSKIKVGSNPDKINAVIEIPYGSNIKYEIDKASGALCVDRVLYGAMFYPANYGFVPNT LADDGDPADVLVLNEYPLAAGSVIPCRLIGVLMMEDESGMDEKLLAVPVSKIDPRYEGIK GVSDLPKATLDKIKNFFETYKLLEPNKWVKVKDFASAAEAEKILDKAIKAYK >gi|257441660|gb|ACYG01000027.1| GENE 42 44858 - 47875 2390 1005 aa, chain - ## HITS:1 COG:HI0661 KEGG:ns NR:ns ## COG: HI0661 COG1629 # Protein_GI_number: 16272604 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Haemophilus influenzae # 31 1005 70 1010 1010 825 47.0 0 MSLFRFSIAAAGALCLCVATLAAQDDSEGNSQNLGQINVTGNVESDPLTKKVGETKKSAK QLAKEQVSDSRDMVRHETGVSVVESGRFGASGYSIRGVDENRVDISIDGLRQAETLSSQG FKDLFEGYGNFNNTRNGVEVENVRQVDITKSADSVKRGSGALGGSVAFETKDARDYLTEK DWYYGFKRGYQSADRQNWQSHAAAVRFKWFDLLAIHTDREGHELKNWGYKDYDPTVIRKV REKPDPYRIYKKSTLVKFGFQPTDTDRFSLGYDKSNIKSEGIDWSNQFALYNTQTPWGAL TNDIRHTNDRSERKNYSFSYENFDETPLWDSLKFSYNKQHIKLKSRTDEYCEGDNCAGNS NPSGLHINEDGKMVDKYGGELQHSTETYYEQPWWSPVPIPRTRDIVIDSRGNKVDDNAYQ GYTNELNTGGVSDILVNCDNYNCSKGIDLFDTNTWSYQHYDLTPVPTPNGKGNYAVINPK DSWNGDSLLLPSQYGFVDNNWKDRDLITDTKQLNLDLTKDFTIKSSEHTLSYGGLFSKSD KRMVNRQGYEPTNKQWWAETFFGVRNTNPDFPMLGTWYADKCKLYNGNDYVSLCGHEDDS FSFLIPVETKTGALYVGDDFRINDVLAFDLNYRYDKVKHNPSYTPGVTPKIPTDLFIGMF VPYTPLPGTPSNDEIKAHRDANAEANAVYLASQKRKYSANSYSLSTNIDPLDFFRIQLKY ANGFRAPTSDEIYFTFQHRDFSIYPNLDLKKETAKTKEIAFTLHNSPSFVTLNLFQTDYR NFIDLQYKGEFQLPYGNGGSTMPTSVYQNVNRPKARVRGIEIDSRLALDQIWQPLQGFSI GYKLSIQKGRMDIGNGKIDTPMNAIQPRTAVYSVSYQSPGDKFGADLFVTAVAAKKGDDT YNMYWYEQARSGKIVNGKPVSNSEVEWRSGGYTTIDFVTYVKPIKYLTLRAGAYNITNRK YITWESARSIRPFGTSNLIDQETGLGINRFYSPGRNYKLTWEMQF >gi|257441660|gb|ACYG01000027.1| GENE 43 48336 - 49361 563 341 aa, chain - ## HITS:1 COG:HP0235 KEGG:ns NR:ns ## COG: HP0235 COG0790 # Protein_GI_number: 15644863 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori 26695 # 22 318 34 314 355 138 33.0 1e-32 MKRYLYLAVIAMFCMGGVFEDADKLYEDGDYFKAIKMWQRSCDGGDTQSCYMLGNLYRFG RNVTQNYQKAANFYQKACDDGDMTGCYELAGLYFEGYGVRQDYQKAASLHQKACDGGNMF SCNLLAISYESGIGVPRDKHKAMVLRQMICDNGDADMCNNLAYLYKNGDKVRQDLQKAES LYKKAAVLYQKKAQINQKKCDEGDLYECQRLADLYLDGRGVEKDFKKAADLYQKACDGGR AAACLTLGDFYKAGNYQKAESLYQSGLNLLKNTCESGDADSCSYLGDLYKNGWQIKQDRS LAKEFYGKACDLAEQIGCDEYKQLNEAELIDDKHGIAPSAP >gi|257441660|gb|ACYG01000027.1| GENE 44 49496 - 51577 2338 693 aa, chain - ## HITS:1 COG:Cj1359 KEGG:ns NR:ns ## COG: Cj1359 COG0855 # Protein_GI_number: 15792682 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Campylobacter jejuni # 1 693 1 694 694 952 69.0 0 MQTQNNFINRELSWLRFNTRVLEQCKKDIPLIEKLKFLAIYSTNLDEFYMIRVAGLKQLF TAGVITSGDDEMTPLEQLRAIRSYLRNEQTELEQQYFGIQKELCKNGLFIKSYDELQPEL KPVADEFFFSQIMPVIVPIAVDATHPFPHLNNLSFSLAVKLCDEGAPESVHFGMIRIPRV IPRFVQVAQNTYVPIGTIVKRHAEEIFPGYKLISSAAFRVTRNADIVIEEEEADDFMMIL EAGLKLRRKGAFVRLQIEKDADAELLEFLNSHLKIFYKDIYECAVPLTLDGLWEIASNKD FSFLAHPQYLPKTLPPFNENTSVMSAMEKEDILLIHPYESFDPVQKLIKEAAKDPKVISI RMTLYRVEKNSPIVQSLIEAASDGKQVTVMVELKARFDEENNLHWAKALEDAGAHVIYGI TGFKVHAKVTQIIKKEDGKLKFYIHLGTGNYNGSSAKIYTDVSFFTCGDRFDKDTTNFFH ILSGYNKNRKLDNLAMSPMQIKERLLAMIKNEEKKGSAGRIIAKMNALVDGDMIKALYKA SAAGVKIDLIVRGICCLRPALKGVSENIRVISIVGKYLEHARIFYFAHAQPSLYIASADW MPRNLERRLELMSPIYNENLQNKLKEILKLQLSDNELAFELQSSGEYRKIVPKKGEDKID DQEFLEIYFNKIYKNIRKHDESGTALTKLLKES >gi|257441660|gb|ACYG01000027.1| GENE 45 51692 - 52477 637 261 aa, chain - ## HITS:1 COG:HP0235 KEGG:ns NR:ns ## COG: HP0235 COG0790 # Protein_GI_number: 15644863 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori 26695 # 31 259 117 352 355 67 28.0 2e-11 MKALFFILVSALFLKAASVSEIYSLGAPACDTYDLNLKKCSNGDGEACYLVALILNNKSC ARKNDDLALEFFEKSCSFGCAKDCIFMGQAYSLTSLDEKHAKIKTYYERACELDAKFCDD YGLLYFYGEGVKKDELAAKEYFKKSCDAGNPAGCGHFATSLNRENENINKVMKFYEIGCN GEHYPSCYAYGLLLWAKVDKNKGKNFCKKACDKGNIKEACKWVLDMSEEEEEQILYLKRY LKLGCKDGNAQMCKDLGKIGN >gi|257441660|gb|ACYG01000027.1| GENE 46 52659 - 53195 310 178 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460382|ref|ZP_05625483.1| ## NR: gi|257460382|ref|ZP_05625483.1| putative CoA-binding domain protein [Campylobacter gracilis RM3268] putative CoA-binding domain protein [Campylobacter gracilis RM3268] # 1 178 1 178 178 332 100.0 5e-90 MRSISVIFLLIMILSCPLSAKSTAEEQNLYNECNKGNGKYSSCTKLIEILSKKCDSGDME KCDDLGYVMGLELGMREAAFVPLEKSCKAGIAASCFNLGIHDIGLRGNVKRAAHNYAIAC EKYSEHLEKERIFKLKSCALKVALENCLRDEEEHDPVKCAKKVFWEISDKYDANSTKE >gi|257441660|gb|ACYG01000027.1| GENE 47 53192 - 53731 252 179 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460383|ref|ZP_05625484.1| ## NR: gi|257460383|ref|ZP_05625484.1| putative Hsp12 variant C [Campylobacter gracilis RM3268] putative Hsp12 variant C [Campylobacter gracilis RM3268] # 1 179 1 179 179 304 100.0 2e-81 MKKFYLKIWLLAFIMAFAATLAAAKSHLTSLIKLEDFNNEEQRMLFKSCDYGDGKYGSCN KLVEILSKECEDGNMRSCTIQSDFLQSLFREEEAMKYLIKLCDANLIEYCMGLGWEDIEF NGNIQRAIRSFEKVCDSKLKNSELFCKMNEELKSCLKDKECNPIIKGKALLKRTVEELK >gi|257441660|gb|ACYG01000027.1| GENE 48 53950 - 56112 1937 720 aa, chain - ## HITS:1 COG:no KEGG:HPG27_323 NR:ns ## KEGG: HPG27_323 # Name: not_defined # Def: hypothetical protein # Organism: H.pylori_G27 # Pathway: not_defined # 469 714 46 303 326 81 31.0 2e-13 MTTTRRWICEIALRLALIVSAFCFTLYAQDLDDAGFCALAAFWVYALFRVLFSFFYEAKQ RANAALFRSGGTLIKIFRGRLISGVLAFASAILLSATLALGLADLRGAELFVTLAALPAG LTLMRLAVLKLSLKEIKNPRILSLKLSILLLAMLAVAVNFAINLAYLRLADAADPAAHSL NSAINFTPPTSTASSAEDFARNDASAPIGNFATDNAAKSAKNSAANNAAIVIGNFETDNA VKYVQDAVKNPTASPANFKAGSVRIAHTSAANSKANAAAAPQTFAKNSTASPAAAQNLAQ NPAAPSMAADSSAEKSATSPASVAEIFEILKSTAPQAHFKSALLNEIYALKFYKNSLFEL ALSQSPSALKIVLLFLICAGDFLFYCAILHLCAFVLFMPRAAAAPKIGRFSGTIFALSYV TLCLICAAQTRTARGEAERPKSAVETGVQIVLQSGERLILSAREADALRGELNATRFAAE ANAASALNSYIDAVYDEGARLSAQRMADFNYSFLSDYLVLWHGVWDDDAGAYLNEKFASF VSESFPKDFGENIAKIAAANVKNYESSLNFTLKKYGAKVDLNVTQSFSLKSKAYRASGTG LGALGGVLGAKLISKSLAKTAAKTGAKTLTKAGASATSGSAGLVCGPGAVVCVPAFAVAT WFGLDFAFAKGDEALNREEFEAAIVRDMMAAKEELKRALAQDFNATIDEISSEILNLDGK >gi|257441660|gb|ACYG01000027.1| GENE 49 56084 - 58162 2142 692 aa, chain - ## HITS:1 COG:Cj0562 KEGG:ns NR:ns ## COG: Cj0562 COG0305 # Protein_GI_number: 15791923 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Campylobacter jejuni # 7 465 1 455 458 456 53.0 1e-128 MATKQNMPANLYDLDMERAILSSLLQNEDAYGELSEIISVGDFFYKPHADIYEAIVKCSS HNEPIAPSFVKKWLAERYDDGAFTEVVATSGVVDAPKYALELREKSIKRSLIKVAHEIPS MVNEAVRSKDTADKISSKIYELIDEERHGGIKKSHEIIADVVEELKRQKALAGSELVGLD TGFRFLNDCTKGLKPGELIIIAARPGMGKTAFALNLMMKTLQSGKGVVFFSLEMPSVQLM YRILSALSSIPLSDIMSAKLSDDDWTRFNDACDAVLNMPLFVYDSGYVNIHQVRTQLRKL KAADTNIELCVIDYIGLMTSTSNYSERHLQIAEISRGLKLLARELNIPIIALSQLNRSLE ARSNKRPMLSDLRESGAIEQDADIILFVYRDEVYKEQMERERISRLEAEGKDAGEPVFRR NDYQEKAEIIVGKNRSGEAGRTIEVGFQGRFTRFVDTSFGGEPSESAIFNENDNLDYVSQ LQDQGFEEPATPRLDAAQNLQQNLTQNFNEAQNSGVSLNTSSAGARNPGVNIDFDEMPSF GESGEQDGEEIDGESKLSAEQGLAEVRRAAQDAPQKQEFNGQNLDDAIAGGVSPQTERMR GNSAERNVKSAEGAKDARQDTKGASQGVSNILREGGAHVEDNDSNENDKPPFEAQEDEAK FKPARPLNIEEMGIPKINEANRLDDDDAPLDL >gi|257441660|gb|ACYG01000027.1| GENE 50 58929 - 59996 1388 355 aa, chain - ## HITS:1 COG:Cj0686 KEGG:ns NR:ns ## COG: Cj0686 COG0821 # Protein_GI_number: 15792035 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Campylobacter jejuni # 4 352 5 353 357 523 74.0 1e-148 MKNRYPTRQISVGSVKIGGGAPISVQSMSFSKTKDVEGTLEQINRLYFAGCDIVRCAVLD KQDADALARIKKSSPLPIVADIHFNFRLALQVAEFVDAIRINPGNIGGKERIKEVVRACK ARSLPIRIGVNLGSLEEQFEQKYGRSVEAMVQSALYNAALLQDEDFSDIAISLKTSDAPS TVAAYRALRPLCEYPFHLGVTEAGTKFHASIKSAIALGTLLMEGIGDTMRVSITGELEEE IRVARAILQDAGVQKSGVNIISCPTCGRLQSDLLSAIKIVEEKTAHIKTPLNISVMGCVV NAIGEAKGADVAIAFGNGRGIVMRHGEVVAKLDESKLVERFLQEVEDEVRAREGA >gi|257441660|gb|ACYG01000027.1| GENE 51 60771 - 61811 407 346 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460392|ref|ZP_05625493.1| ## NR: gi|257460392|ref|ZP_05625493.1| hypothetical protein CAMGR0001_1159 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1159 [Campylobacter gracilis RM3268] # 1 346 1 346 346 500 100.0 1e-140 MKNLARIFLIAFILASFSSAFAAQQNHKYKISSQNLRAKDHLSKNTSAKSLAEPHAKKSA NAKSLSNSKFTKNTRASRNSAKNSTQKSAKNFTKNPGQNSASHPVVRNKAPRRPASQSGS QNGASKSLVATLMRLPKTRIYEDEAPSARDTEQTYRGADMRRNASAQTHGGADEQTGKIV DARTRKLTTTRIAQPQARHGYSATRSVAMGHTAASHSSATKYTARQNARAPYLPTSARSS RVIGHPGGSALSKIPSPERSNALGQGAAMRYDERWAKPAPQPYEPAPETEKKRGLIFSSQ WGPAAPKSKWQQHEAPMDDASSRNESVMDMLQDKMSRVKVNMELVR >gi|257441660|gb|ACYG01000027.1| GENE 52 62407 - 64044 1716 545 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 545 3 547 547 665 64 0.0 MAKEIIFSDDARNKLYAGVRKLNDAVKVTMGPRGRNVLIQKSFGAPAITKDGVTVAKEIE LKDTLENMGASLVREVASKTNDQAGDGTTTATVLAHAIFKEGLRNVTAGANPIEVKRGMD KFSAAVIEELKKSSKKVSGKKEIAQVATISANNDSAVGDLIADAMERVGKDGVITVEEAK SINDELNVVEGMQFDRGYLSPYFITNAEKMLVELSSPLVLLFDKKITNLKDLLPVLEQVQ KSGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGTVI SEELGRTLESASMADLGQAERIVIDKDNTTIVGGAGKKKDIDARVLQIKAQIAETTSDYD KEKLQERMAKLSGGVAVIKVGAATETEMKEKKDRVDDALNATKAAVDEGIVIGGGAALIR AGLSVKLALSGDELIGADIVKRALFAPLRQIAENAGFDAGVVANKVEQGSDKKFGFNAAN GEYVNMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEIKEEKPAMPPMPDMGGMGG MGGMM >gi|257441660|gb|ACYG01000027.1| GENE 53 64057 - 64320 361 87 aa, chain - ## HITS:1 COG:Cj1220 KEGG:ns NR:ns ## COG: Cj1220 COG0234 # Protein_GI_number: 15792544 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Campylobacter jejuni # 1 87 1 86 86 107 65.0 8e-24 MKFQPLGKRVLIEREEETKKTASGIIIPDNASKEKPSTGKIVAVGSECEGVKNGDTVAFA KYAGSEISLDDKKYLILNLEDVLGIIK >gi|257441660|gb|ACYG01000027.1| GENE 54 64527 - 66773 3049 748 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0310 NR:ns ## KEGG: CCV52592_0310 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 748 1 676 676 313 32.0 2e-83 MKIFGIIAGILILLIVGTGCLFFSDFGNNLTKPYIENLIKEKSGLDVKLEKFDLNFGDLD ISANVNDAANVNVKGKYSLFARSFDLSYDANAHDLAKLGIKTSEGLSLKGQILGDLDKFG INGSGRIFDSNVKFLVNLKDLSPLDLQIDAKGLNVEKALSVASLPIYAKGNIDILSDIKA SSGGAEGNASIKSSNLVLNESAFKDMNISIPKGVQITLNSDITAQNDILRAASKIDSTLG KISAEKSEFDLKNKTLNSDFNLSLPDLAKLESLIGRKISGDVKANGNLKTDFSTLELSNS QISAFRDALKADTEAKYDLKNKNGELSAKLNANDLAALQNVLGVKLQGKANGELSAALAQ NELKNLNLNLNAMGGNLNASGNLSDLKLKASNLNLAMLSALFYGGAIGEGTINGDAKLSL KDSINGMAQISLANGVIFKKFLDGATGKNFPSDLKADAQAQTNIKNSVATFSVSANSDLA QLQSLNGTYELKNKALKANYALLIPSLQRLEFFLNRRLNGKIAATGELSHDGKSLFATIN SKVAGGELNGQIAGDEANFKLQNFIVKELTTLLNIDHVYDGTGNANLTYNTSSHSGKFDA IINNGRLPSGGLIDKIGKILGRDLGGEVYNDAKVNGTIKQNLINFNADMSAQKSKLNVTG GTLDSKTGAISVPVKANIEKTDLEINITGTIKEPKYNIQSDYLKGKLDKQIGKGIDKLFG VKKDDNSSKNDAKKEKSDVVKGLIKGLF >gi|257441660|gb|ACYG01000027.1| GENE 55 67366 - 68067 579 233 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460398|ref|ZP_05625499.1| ## NR: gi|257460398|ref|ZP_05625499.1| hypothetical protein CAMGR0001_1165 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1165 [Campylobacter gracilis RM3268] # 1 233 1 233 233 451 100.0 1e-125 MLIFTLCFCGFAVLCNLICRAMKRGDASLLARLKASKLARVFARAFVPFGEAPLIKIRLL QVAGIFAFVALFLSVILFLNAPENNDISGAQILSGELVSYERHRHYKSDYCDIEIRTSEG ELERLRSGICRDEMQFRRGERISIWYKRDLMHPGEIRIYQLKFEKDKGYLIEFNEGRRDT YLKTAAGSLFVLALCLALIYALNTDEAREAYERKKQKGENTARSMETKYFKKR >gi|257441660|gb|ACYG01000027.1| GENE 56 68241 - 68867 253 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460400|ref|ZP_05625501.1| ## NR: gi|257460400|ref|ZP_05625501.1| hypothetical protein CAMGR0001_1167 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1167 [Campylobacter gracilis RM3268] # 1 208 1 208 208 402 100.0 1e-111 MKLGEIWHNLDRKFDLFMIAFYLAAMWYGFLFSLNPKSLDDLKIANGIIMDVGSDDGREY MQIFTDERKFIKVFLNGDTDNLTSFYKNKILLNAAIAEANFKRSGADEWQGVNIKPSISL IAYEWLEGKRVKAWYQSRPFQGHGTAYQVLFLDYKASIDPQQREYLIKFRYDKYATMDDK FTAMVFGALTLIFLAIAASKIYRARQLS >gi|257441660|gb|ACYG01000027.1| GENE 57 68920 - 69549 740 209 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460401|ref|ZP_05625502.1| ## NR: gi|257460401|ref|ZP_05625502.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 209 1 209 209 377 100.0 1e-103 MKKFIAVLLAVLLVGCQCKQNVVPGANETPEKITAFFINDGKEYIVGEKLSYVLTDGSSL KNISEFYDGGYAKGLKREFVQIEVTDAKNGEARGSFSAFLNSAAGADVAKIKALANRIEI DEKKGEIEVIFNFDARVVQIKNLSEIMKPSDRLRSPIPANIEVRPERCEGNALLDTLGVI VAIPVIIVGVVLFLPVGAMEALAMQHSPR >gi|257441660|gb|ACYG01000027.1| GENE 58 69682 - 70125 242 147 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 142 1 142 147 97 33 6e-19 MGVREQILEDIKTAMKSGDHFRRDSLRMLNAALKQVEVDERISLSDERVFSILQSEIKRR NDSVEQYRAGGRDDLVQKEQGEIEIIASYLPAQLSDAELAAAVGSLIAQLGASGAKDMGR VMKAAKEALGSSVDGKRLSEAVKAALK >gi|257441660|gb|ACYG01000027.1| GENE 59 70370 - 72607 2726 745 aa, chain - ## HITS:1 COG:NMB1622 KEGG:ns NR:ns ## COG: NMB1622 COG3256 # Protein_GI_number: 15677472 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Neisseria meningitidis MC58 # 1 745 1 751 751 816 58.0 0 MAEFKRLWMALVAVLIVGFSFLGFYGGEVYRQSPPVVKFTDASGAELISTERIYRGQEAW QSIGGMQVGSIWGHGAYQAPDWSADWLHKELVAFMDIKAQERFGAKFDALSDEQKAQIKA LTKAEYRTNTVKDGAVKLSDDRLKAMAVVKDEYMGVFGNDPRFKKLREDYAMKENTLANE QHRAELVDFIFWTAWAVSTDRPSGEATYTNNWPHEPLIDNVPTTENVVWTIASLVILLTG IGLLVWFGNFYGKKDEDFEAPAKLNADPIAALALTPSQKALGKYLFVAVALFAFQAFIGG FVAHYTIEGQSFFGLDLSQYIPYSLARTWHVQASIFWIATGFLAAGLFLAPIINGGKDPK FQKLGVDVLFYALLFLVVGSFAGEYMAIAGKMDPSSSFWIGHQGYEYLDLGRIWQLILFV GLVIWMVLVLRGFIAGFRAEGDKNLLAIFTASVIAVGLFYGAGLFYGQRSPIPVMEYWRW WVVHLWVEGFFEVFATASLAFVFASLGLVSKKFATYTSIASASIFLIGGIPGTFHHLYFA GTTTPIMAVGASFSALEVVPLVLLGSEAFHYYKLQFAQDWAKRLKWPLYCFIAVAFWNML GAGVFGFLINPPLALFYIQGLNTTAVHAHTALFGVYGFLALGFVWLVALYIYKDKNFDDT LMKIGFWALNAGLLLMVLISLLPVGILQAFAAIDVGMWYARSAEFLQKDSLYGLRWARII GDTIFLVGSVCFLLQIVRMIFSRAK >gi|257441660|gb|ACYG01000027.1| GENE 60 72752 - 73402 485 216 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460405|ref|ZP_05625506.1| ## NR: gi|257460405|ref|ZP_05625506.1| hypothetical protein CAMGR0001_1172 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1172 [Campylobacter gracilis RM3268] # 1 216 1 216 216 380 100.0 1e-104 MEFQSYKSEMPLFMIKDYWTKISTECYLILAVFLVIFLFFCRGSAWAYQFLGAVTFLVGI LFINKHKFLNFYSDRIEYNSLCKNYNDVYSVHKSVKASNFDKIAIYKFSGLVIEDACKYN ANITRFKKFLLLILSYALHPINLLCFGVLKILRRIDSINLNVLILLDSTHSNYFAIPLTM LSEYERVNLKKYLKDKLNLNLDNIEIRDRFIDINFI >gi|257441660|gb|ACYG01000027.1| GENE 61 73444 - 73839 191 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460406|ref|ZP_05625507.1| ## NR: gi|257460406|ref|ZP_05625507.1| hypothetical protein CAMGR0001_1173 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1173 [Campylobacter gracilis RM3268] # 45 131 1 87 87 121 98.0 2e-26 MWIYGIIIFAVSSLYSLVYYIYFCRYDDDFILVAKKKRENDCPFLLLPFMFGLGIFMFEV YYTGYFASSGISIRTSHFMPEFQSRFSIFGYIFFFQSGFSLSGSVILMSTFEFVYKIYFY LKGVKDAEQSQ >gi|257441660|gb|ACYG01000027.1| GENE 62 73802 - 74095 180 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460407|ref|ZP_05625508.1| ## NR: gi|257460407|ref|ZP_05625508.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 97 1 97 97 153 100.0 3e-36 MQNLEFESKKIRIENTRVKFGKFFTKLCFIYFFYSLSAFIIPKNILDISPVCLNFVNFMK SYFPNIEIIGSISPYTQLSEFYVSYYVDIRDYYFCGF >gi|257441660|gb|ACYG01000027.1| GENE 63 74238 - 76148 2105 636 aa, chain - ## HITS:1 COG:Cj0508 KEGG:ns NR:ns ## COG: Cj0508 COG0744 # Protein_GI_number: 15791870 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Campylobacter jejuni # 1 626 3 631 643 732 56.0 0 MVRVLFSFITVCAFAAGGIFLYFYSQIRLESDSIIDYHPELTTKIYDRNGNLIANVFNEQ NRIYVKFDEIPGRVIEALVAIEDTAFFEHGGVNVEAIFRAIIKDVKAMKFVEGASTITQQ ITRNLVLSSEKKLDRKIKEAILSLKIENALSKEQILERYFNEVYFGHGYYGIRTAALGYF KKDLQDLSLKEIAILVGLPKAPSSFDPTKHLDLSLSRANNVIYRMHELGWINKTEYELAM NEQPTIYNETLTQNVAPYAVDEIIKEAEKILPDVRTGGYRIDTSLDLKAQAMAQEALVFG YNEILKRNKDANASNVNGAMIVTHPQNGEILALVGGVDYAKSNFNRASQSQRQTGSSFKP FVYQIALDMGYSTMTEVPDIAREFDDGSDKTWKPKNYDKTYSGYITIKEALTRSRNLASI NLMQSIGVDRAVKKLGEFGFKNVPPALSVAIGSYGISPLEYSTMYSMFPGLGITAKSKFI VSITDKDGKTRFIEPERRRVLRPEQAYLMTTLLKNIVQRGTGTRARVQGIDIAGKTGTSN DSIDAWFCGFTPDLQIIIWYGNDDYKPMRKVEGGGRTAAPVFAKFLDAYLKEYPQTKRNF TVPDGVFSRQYNGKEEYYTKISPLPKPRESSSDGSF >gi|257441660|gb|ACYG01000027.1| GENE 64 76142 - 76420 292 92 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0049 NR:ns ## KEGG: CCC13826_0049 # Name: not_defined # Def: Maf-like protein # Organism: C.concisus # Pathway: not_defined # 1 91 91 180 180 96 57.0 3e-19 MLQAQSGASCAVYTAMIFCSKALELSALSVASFEFAEFNEADLKGYIASGDWCGKAGAMS IEGFNEKYIKSSRGSKFTAMGLDLEILKRFVW >gi|257441660|gb|ACYG01000027.1| GENE 65 76453 - 76686 103 77 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0984 NR:ns ## KEGG: CHAB381_0984 # Name: not_defined # Def: Maf-like protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 56 1 56 182 78 67.0 1e-13 MIYLASSSPTRAQILKDNGVEFTQIPFNFDESGISKDDARTYAYRVTVAKKTQFLKFIKI MIECCLPIAPCLLVAKF >gi|257441660|gb|ACYG01000027.1| GENE 66 76686 - 77075 264 129 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0985 NR:ns ## KEGG: CHAB381_0985 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 14 126 45 154 158 87 42.0 2e-16 MNLSSKSQADAKDVKFTEILRYMKRYEQFFALFLAIVCVSGFFLADGGGFKFSDPMVKGA IATLWAGAGFILLNFIYMHYKISSLKRALDAGDELEANEHLIIVVKYFIPLNIVVTLICV YLGVTVGEF >gi|257441660|gb|ACYG01000027.1| GENE 67 77192 - 79735 2383 847 aa, chain - ## HITS:1 COG:Cj0506 KEGG:ns NR:ns ## COG: Cj0506 COG0013 # Protein_GI_number: 15791868 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 840 1 835 842 1186 70.0 0 MDIRSEYLNFFASKGHQIIPSAPLVPDDDSLLFTNAGMVPFKSIFTGAVPRPTPPIRTSC QTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGEYFKEQAIAYAWEFITEILKLPKDK LYVTVHEKDDKAYEFWARHIARERIYRFGDHDNFWAMGDTGPCGPCSEIFYDQGEEHFHS PEDYMGGDGDRFLEIWNLVFMQYERSKDGKLSPLPKPSIDTGMGLERVTAIKEGKFSNYD SSLFMPLIDEVAKLCGRPYVYESGASYRVIADHIRSVVFLLAQGTNFNREGRGYVLRRIL RRAVRHGYLLGIKEPFMYRLVDKVCELMGGHYAYLNEKKEAVKEQIKLEEERFFATLANG IELFNEELARTKEIFSGEVAFKLYDTYGFPLDLTADMLREKNLRVDEAKFDALMSEQRQI AKAAWKGSGDKNVRGDFKALLEKFGENKFSGYEELSRTSKVLALLNEDFAEVDELKAGDI GWAMFDVTPFYAQSGGQTGDSGEVESIADVFDTQKFYGLNLSHLRLNRNLKIGDIVGLKV SEEREQIARHHSATHLLHAALRAVLGAHIAQAGSLVEADRLRFDFSHPKALSDEELAKIE EFVNNAVCKGCAAKTEIMDIDDAKNSGAIALFGEKYGSKVRVVSFGEISKELCGGIHVRN LSEIGSFFIVKESGVSAGVRRIEAVCSRAALNLALQNRAKLAEISAELKGIEPLRAIEKL KDEIRSLKDQIKHASSSHALAFLNVGDTKLCVASVESGDIKTMIDEFKNSHEKAAIMLMQ VGADGKISIAAGVKNAPIKAGEWVKLVAQILGGGGGGRDDFATAGGKDVLKIEEAIKEAI SYAKGKI >gi|257441660|gb|ACYG01000027.1| GENE 68 79857 - 80729 973 290 aa, chain + ## HITS:1 COG:Cj0504c KEGG:ns NR:ns ## COG: Cj0504c COG0673 # Protein_GI_number: 15791866 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Campylobacter jejuni # 4 289 2 284 288 104 29.0 2e-22 MKKKIAIIGMGELGQKHFSELRRSDYFELVALYHKGSSENFGPRYPIFDNLTDLFNVAKP DAVVITAPPPSHKELILKCLPFTKNIFVESPLAQSLAEAREINYAVTTNGTRLAVGYSDR YNPVIVSLLRELAKGDKIFSMSFVSGFANDDRADIVANALFRDIDLVRLLSHSEIACIEL SKNISKERTLAACATLHTKSGCYCTLMQSNLYPIRRHGIEICTDSGVYFGDLISITLFKI TPDGRVNLRVDRDDFSLRREHEAFCAMCDSSTNAGLASVEDAIKIREIIS >gi|257441660|gb|ACYG01000027.1| GENE 69 80726 - 81823 901 365 aa, chain + ## HITS:1 COG:jhp1005 KEGG:ns NR:ns ## COG: jhp1005 COG0276 # Protein_GI_number: 15612070 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Helicobacter pylori J99 # 2 361 20 326 335 224 37.0 2e-58 MKKALILLNMGGPNNLSEVEVFLKNMFNDPFILGIKSDFWRSVLAALIVRSRAAAALSNY EKLGGRSPICSITEALCERVNSLARAELSARLKFEGAADASAANEPLQDISLQSKPPQDV PTHGEPLQNEAPQDKKPIDELICDYAMNYTPPFAEDVFKKYADFDEIILMPLYPHFSKTT VQSSLCSAEAALKRLGIKNYKIVDIFYDSAAYNEILLNLIAGCVAKFSVDEISQISLIFS AHSLPVKMVAAGDPYKAQVEAHVEILKDLLAARGIKFKEIILAYQSRLGPVKWLEPNVAD VLRDLQSKKALIFPIAFCVDNSETDFELDIFYRAQARELGYEYYEVCKCPNSREDFAKFI LAQAL >gi|257441660|gb|ACYG01000027.1| GENE 70 82119 - 83297 1131 392 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1159 NR:ns ## KEGG: CHAB381_1159 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 17 381 2 412 448 199 34.0 2e-49 MKTFLKTLLKIIKNIFKGIFYTAVFIGLFALALKVQTGRFKSTSSHYTVTANTKVDPNSE LAKYVTQKEINAVGYRYWDIDEEEVRDNPTMELLRRSLKSKDTDKILKFMQDNNISVDTP LHFGVTPLMYASFYDDEKTAKKLIEMGADPHKKDNYELSPMAYAMENNATKSVRLLLDSG VKFDEVEIVQETYGIMDVENWIDSVSFDENATPIIHYRTKEVLFSGGGEPYYFISHLVRN NMYDIMKMVLESGYRPYTYSTFNMGEVSVSNKLEEIPGYKNIKNTNKEYGVEEFRLYMSV YGGLLDVPEPGAMIDLLLQYDIGGIPNDEFLKRMYDDKCYETYRYDIAVGYYKMGSMFDS AFLQKHCSDKNATFKNIKEYILFAVGQKKLMK >gi|257441660|gb|ACYG01000027.1| GENE 71 83534 - 84790 1637 418 aa, chain - ## HITS:1 COG:PM1003 KEGG:ns NR:ns ## COG: PM1003 COG0677 # Protein_GI_number: 15602868 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pasteurella multocida # 4 418 2 422 424 485 55.0 1e-137 MKANEGKMKIAIIGLGYVGLPLAAAFAAKHEVVGFDVSQERIDELRGGHDRTLELSDEEL AAAIQNGLKFSAKLDDMRQSNFYIVCVPTPVDRLNRPDLTPLIKASESVGAVLKKGDIVV YESTVYPGATEEDCVPVLERVSGLKFNRDFFCGYSPERINPGDKIHTVTKIKKIVSASTL EALDVVDSVYLSILQNGTFRASSIKVAEAAKVIENTQRDINIGFINELAILFGKLGINTN DVIDAAATKWNFLSFRPGLVGGHCIGIDPYYLAQKATEVGYHPEIILSSRRINDNMGSYV ATEVVKMMIKYDEKVKGAKVLILGLTFKENCPDTRNTRVVDMINELKNFGCEVSVYDPWA SAADAKRYYDIDLLQKPDLRKFDCVVIAVAHKQFFELDYAGSLVYDVKNVYKGAQGKL >gi|257441660|gb|ACYG01000027.1| GENE 72 85279 - 87099 2047 606 aa, chain - ## HITS:1 COG:Cj0525c KEGG:ns NR:ns ## COG: Cj0525c COG0768 # Protein_GI_number: 15791886 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Campylobacter jejuni # 15 592 12 598 602 454 45.0 1e-127 MWQRDKSSSVGMIIVMFIFVPAALFVFLAILYFWGSTERKLPRLDVNETNSAIRGAIIAK DNYVAANSVKLYKVSVDARSIDKNKLDLFVRLYCIYTGDSEKRVKSAIEGSGGTTVLSYK IDAKTAVHLKELAYKLNLKKVFVSFMGSNGRLNPPIRMSVSESGEKRSYNVGDSLTPLIG YINKKEVDGITKVSGIKGIEKYYEYYLAPVRDEFIVGPRDIGGNIILERSSKKTGRIDGY NVRLSVPLTLQRKIERLSDEGADNYDAREIVVGIMNSKTGKILSLATNARYDPSNITKND LKNLNFTASEYAYEVGSIMKPIIFAIAYDAKAVKPGEIINTHNGSYKLGTRTIRDTHPAK QMSGEEIIIHSSNIGMIKISERLEGQAIYDGLMNFGMSQKTGIDLPYEQSGNIPSIKSLN NKIYKATISYGYGAQMTFLQMLNAYTVFNNGGVMISPRLVENLENNGKTYIVNESETRQV ISKPTADVIKGILIKTVESGTGRKGRVAGLQIGGKTGTARIAKGGGYSSAYNSSFFGFAN DADTSYTIGVLVREPKRGSYYAAQNALPIFKRAVGILIEEGYLKPAADANATQKVEIKDE AVEIKD >gi|257441660|gb|ACYG01000027.1| GENE 73 87168 - 87845 771 225 aa, chain - ## HITS:1 COG:Cj1109 KEGG:ns NR:ns ## COG: Cj1109 COG2360 # Protein_GI_number: 15792434 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Campylobacter jejuni # 11 219 11 213 215 219 44.0 2e-57 MARFYDFPDPMDAPDFAPLASGGDLSENCLLSAYSAGIFPWFNEDEPILWWSPDPRAVLD PREVRVQKSIKPYLKRYEVKFDANFKGFIERCKDVRKKESDGTWISEQIVQAYSRLAADG YAHSVEAYEDGELVGGLYGLIFGRVFCGESMLSLKSNASKVALIRLCEVLANFGFLIDCQ IMNEHLKFMGAKEMPRAEFLALFAELSAQDSGFERFADLKVPRGA >gi|257441660|gb|ACYG01000027.1| GENE 74 87845 - 90226 1211 793 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 209 766 175 806 815 471 43 1e-131 MIGFFLNKHFEQAISVANDGEDEYITTSHVVYAIFKYNKPFHGLIAKEIPDINYLNILDN LGGLLDMMPKSSGKAPAQTIEFKQFYTELNNAKEPKNELDFMLKILNDKENDCTKILNHY GINAAIFELIVRKYKSAFDHRDEVVSRDEAAAIKLNSYDIDDITHAMNYDESRKQWQNTE FEPAFEGEKDAINERDIKKDSPSSLYTANLNKIALEGKIDPLIGREKEIEKTLQTLCRRK KNNPILVGEAGVGKTAIIEGIALKIVRGEVPEKLKNKVIYALDAGALIAGTTLRGEFEER LKDLIDEFSANQNAILFIDEIHTIVGAGTGNRNELDMSNILKPSLASGELSVIGATTYGE YRSFSQDKALSRRFCKIDVSEPSIDDSVEILKGVAKKYEEFHGVKFSDEILRDSVTLAKK YQSDKFLPDSAIDLIDEVGASFAFKPHEAPLEISKDDLVNTLSISANIANLSSSVDNKQV LKNLEANIKREIFGQDEAVSSLCKALLRSYAGLGGASSPIGVFLFAGSSGVGKSELAKVL AAQLGVHFERYDMSEYMEAHSVSRLIGAPPGYVGFENGGILTNNIKKHPYSVILFDEVEK AHPSMTNIFLGIFDNASLTDNNGVTTDFKNTIIIMSSNLGTKEAPQVGFTKDESYKVDSA IKSFFAPEFRNRIDKIINFNRLSGEILEKIVDKTIGELESQLKNVKISLNKEAKDLIISR GYSDEFGARNLKREISSQISDHISGELLFGALQEGGLVSVSVKDGELSFSFASTPLPQIE KKQPALAQSSVVK >gi|257441660|gb|ACYG01000027.1| GENE 75 90242 - 90547 359 101 aa, chain - ## HITS:1 COG:Cj1107 KEGG:ns NR:ns ## COG: Cj1107 COG2127 # Protein_GI_number: 15792432 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 8 101 3 96 96 97 51.0 7e-21 MATKTGVQIRTRAKTKSFVPRPYKVILLNDDVTTMDFVVYILMEIFAKNFNDAVDLMMKV HKQGRAVCGAYPKEIAECKQQAVLQAAKAAGFPLRCEIEED >gi|257441660|gb|ACYG01000027.1| GENE 76 90537 - 91235 731 232 aa, chain - ## HITS:1 COG:Cj1106 KEGG:ns NR:ns ## COG: Cj1106 COG0526 # Protein_GI_number: 15792431 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Campylobacter jejuni # 55 231 24 199 200 139 39.0 5e-33 MKKFLLLCLAIFVLSGCGDDSQKKTGSAGENPAASENQIVKNSAQDKNGERIGGESGEEV AFTPFKTGERFTLKSVVGGEVTIERTEKGFKLADSDKILMFDIFGTYCQPCRIEAPHLMD FQLKNSADFLMVGLIYFEDITDAQVIENFTKKFNAYYFISNSKQNERIVGQILSDIGYRH ALSIPFKVVLKDGKYQRLTDINEGDERGKPYYLGMVDTDVIKSDIARIKNGN >gi|257441660|gb|ACYG01000027.1| GENE 77 91291 - 91755 651 154 aa, chain - ## HITS:1 COG:Cj1105 KEGG:ns NR:ns ## COG: Cj1105 COG0691 # Protein_GI_number: 15792430 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Campylobacter jejuni # 1 149 1 149 150 177 67.0 5e-45 MKELSKNRKAFHDFTILESFEAGIVLKGSEVKALRAGRGNLKDSFCRVIRGELFLLNAHI SYLESTNAHFRPDEGAARKLLMHRKQIDKLLGAVSKEGLTIVVLSLYLNDKNRVKARIAL AKGKNLHDKRESLKRKEADREAQSAMKRYDKHSF >gi|257441660|gb|ACYG01000027.1| GENE 78 91881 - 92624 769 247 aa, chain - ## HITS:1 COG:Cj1104 KEGG:ns NR:ns ## COG: Cj1104 COG1947 # Protein_GI_number: 15792429 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Campylobacter jejuni # 1 244 1 251 255 199 46.0 5e-51 MKAYAKINVFLKVVGTRGGYHEIASRFVLRRELFDEISFERASGFALECDAAQIADNIIL KAKAALERAGFARELAEFFSSHKIVLKKRIPIGAGLGGGSSDAAAFLRLANEELNLKISR ERLTKIAQNIGADVAFFVSGLEAANVRGIGEIIEPFEDSLPAIEILTPAIFCSTGAVYNE FRASFMQNIDATQARQMLSLSSEQLLAQYGGFQLNDLFAPCIKLYPQMDRYRDMFLSGSG SSVFFLK >gi|257441660|gb|ACYG01000027.1| GENE 79 93454 - 94302 881 282 aa, chain - ## HITS:1 COG:Cj1102 KEGG:ns NR:ns ## COG: Cj1102 COG0130 # Protein_GI_number: 15792427 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Campylobacter jejuni # 1 275 1 269 272 249 48.0 6e-66 MNRLFLADKPAGIGSNKFLSALKRKYGVKKAGFSGTLDPFASGALIVAFGQYARFFRFLK KEPKIYAATLWLGAQSPSGDNENIERVEQIPPLSRKVLDAAIAQMRGEIKFIPPAFSAKK IDGVRAYKLARAGEEVSLKESSMRVFDAEILSYAHPFVSFRVALSEGGYVRSFAQILAEK LGVCGTLSALRRESEGAFDLKDPRFADEAALNPLEFLDLAPNFYDGDARDVILGKKLAAK DLASRADGRYLLICGDFYSIIEISSGEVRYLWNDVPIAGGAF >gi|257441660|gb|ACYG01000027.1| GENE 80 94295 - 96355 2061 686 aa, chain - ## HITS:1 COG:Cj1101 KEGG:ns NR:ns ## COG: Cj1101 COG0210 # Protein_GI_number: 15792426 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Campylobacter jejuni # 3 681 2 689 691 611 51.0 1e-174 MSDILEGLNPTQREAASHVDGAMLILAGAGSGKTKTITARLAYLLSNGVPPGNTLTLTFT NKAATEMRSRALNLISGLNLSGVPLLCTFHKFGLLFLKFHISELGRSANFQVIDTDDKKK IIKGFEINLPTSLLAAKISTYKNSLIGPKDIDELLKGEEDELSRMYSGFYAHCADAYKRY EAYLAANNLVDFDDLLILPYKILSANERLCDEISRRYVYITVDEYQDTNDIQFKLLQKLC AAHENLVVVGDDDQSIYGWRGARIENILNFKDQFSNVKFIKLEQNYRSTDEILSAANELI SHNKNRLGKSLTSMNGGGEKIEILRSDEESIEAAKIAEAIKKLLSSGVAPSQIAVLYRVN ALSRALEEGLNRAKIPYKMVGGVKFYERAEIKDTIAYLRLVNDEHDDFSMRRIINVPKRG IGKVSLAKLEELSRLRLISLFDAFSEPDAGLSAKAAQALAELKSGIASISALADTIKKIE ALEPTFGLKAYYASLPDGADRVANIDEFLAMLKDEASNKPDFDLAEFLNELSLLSDQDAI MGDAINIMSVHASKGLEFEHLFVIGLEEGFFPLLGDSNDIEEERRLAYVAITRAKRTLTL SFAASRFYRGKRERLDASRFIAEAGLVAKEPPREQSSGFSKGELIKHKLFGIGQITAVNG DRLTINFGGISRVIMSNFVEKIGSYE >gi|257441660|gb|ACYG01000027.1| GENE 81 96352 - 96759 419 135 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0717 NR:ns ## KEGG: CFF8240_0717 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 1 133 1 135 147 106 44.0 4e-22 MIDKILKDDKFIAASSANIGAVLDYVLALGYGFGIVARTDQIKFDPPLPEEILKSFKMPA IFLQLEEYTLSSAHLSKDELVFEAGFGPQDFASTLSVPFYAVLQIVVDGKPIAVNFSQPE SEWLKREKSRKIFSK >gi|257441660|gb|ACYG01000027.1| GENE 82 96761 - 98674 1950 637 aa, chain - ## HITS:1 COG:Cj1099 KEGG:ns NR:ns ## COG: Cj1099 COG1164 # Protein_GI_number: 15792424 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Campylobacter jejuni # 1 452 2 458 573 375 47.0 1e-103 MNWNLGELFANEAEFSGAIDSASAQARDFELKFKDKLHALSAEEFLDALELYESISEQIG KIMSFAHLRFARDTSLGAQQAKTEQACNDISQSLLFFELEFNELDAAKQDEFIAGGGRFR YYLSLLKRRKAHQLSLPQESVLLKTSPVSGEAFSRLFDESMARMSFDFRGQKLGEEEILS LLHSSDREVRKDAAASLSAVLEQNSHLLGYIYNMIKTDLKIRCELRGYDKAEAVMHEENQ INIASVDALIAETERSFALVGKFYAKKREILGYDALYDYDRYAPLGGDESEFSFGQAKQI VLAAFEKFSPKFKQIALIAFERNWIDAMPTQNKQSGAFSHSGSRDTHPFVLLNFTRKRRD VFTLAHELGHAIHQYLSYGVGYFNSFTPLTTAETASVFCEMLVFDYMRENFSNLNGLSNF KSTAALDGSQNFKCSASQEAQGGEIPNERAVKNSASQDSAGSCELAASDTDTPSQTANDK AALRAMLAAKIEDIFATLYRQIGFTTFERRVHASADELSIERLGELWMEESRKMFAGELI LQDHYKSWWSYIPHFVHTPFYCYSYAYAQLLVLAFYGLYKSGRLENFVQIYTEFLSSGGS DAPQKLVAKFGFDINKSEFWRIGIEQVAALVDEFVRG >gi|257441660|gb|ACYG01000027.1| GENE 83 98786 - 100045 1392 419 aa, chain - ## HITS:1 COG:VCA0036 KEGG:ns NR:ns ## COG: VCA0036 COG3633 # Protein_GI_number: 15600807 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Vibrio cholerae # 15 416 14 399 405 397 58.0 1e-110 MSSIQKLVASYKDKNLVLRIVTGLIIGAILGFVARSAAGDIAAEHNSFLINVVAFGEILG NLFVGALKAVAPILVFILILSSIVNKQYGSASGLKRVVVLYIVGTFLASCVGVAASFLFP TELALSNVGAAENTAPASVWIVLKDLLFKVVDNPLNAIAHGNYVGILTWAIGLGVALKFC TNETKKIFTDLSEAVTKIVQFVIQLAPFGIFGLVASTVYQTGVDALLGYVRIVVVLVGAM AFVALVVNPLIVFAVIKKNPYPLVFTCLRESGLTAFFTRSSAANIPVNLNLCKKLGISDE LSSISIPLGATINMAGAAVVIAILALAAAHTLGVRPDFWTALLLCVVSAVGACGASGVPG GSLMLIPLACSLFNISNDIAMQVVAIGFIIGVIQDSVETAINSSTDVIFTAIASQSMQK >gi|257441660|gb|ACYG01000027.1| GENE 84 100190 - 101389 1679 399 aa, chain + ## HITS:1 COG:Cj1096c KEGG:ns NR:ns ## COG: Cj1096c COG0192 # Protein_GI_number: 15792421 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Campylobacter jejuni # 1 398 1 397 398 614 74.0 1e-175 MYLFTSEVVSPGHPDKCADIIADSIVDEILKQDPNGRVAAEVFIAGKHVVIGGEVNAKID FTHDDYRHIVKGALSEIGYNDNPHFTRAQCLHPQDLQVDVFLNQQSPDINQGVDQEGGEI GAGDQGIMFGFASCETKNFMPAAITYARLLCDHVYAYAKSHPNELGVDIKTQVSVDYGTK SNFEECKPQSIHTIVVSAPCVESMSIERVRDLIGNLIDSAGLPKELYDKSKTIIYINPTG RYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSSKDYTKVDRSGLYAARYIAKNIVAA GLAKKCIVQLSYAIGVAKPVSVSVDCMGTNLGAASDDELSAFVLEKFPLTPRWIIDKFGL DRPGKESFLYADVAARGQVGNDEYPWEKLDSVELFKALK >gi|257441660|gb|ACYG01000027.1| GENE 85 102410 - 103594 1065 394 aa, chain - ## HITS:1 COG:VC0488 KEGG:ns NR:ns ## COG: VC0488 COG4663 # Protein_GI_number: 15640515 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component # Organism: Vibrio cholerae # 9 347 14 355 359 351 49.0 1e-96 MKKSILVGLSLIIATSLWGADKKVYRLKLAQTYELSMPIVGDVAKRMADLADSMSDGRLK ISIDAPSKHKAPFAIYDMVKNGQYDLGYTASYYYKGKNSANMLFTTVPFGMTKDEQHAWY YFGGGKELADKFYAKSNLKVFNILNSGMQMGGWFKKEINTLDDLKGLKFRIPSFGGEVMS RLGVAVATIPVGELYMALEMGTIDAVEWASPSFDIPLGFHKVANYYYTGWQEPASEQQIV INLQTWQKLPKDLQNILEASIAKAREYAENETFYKNVIIWDEIKKKYPNVQIRSFSPEIM RALRKATDEILAEESEKNPDFKEIWESQKAFLAKARTWTKMGDFTYIEKTGDVEAEQNFT ASVKKISVPEPVNSAASEINASTAAPKNEDNQTK >gi|257441660|gb|ACYG01000027.1| GENE 86 103716 - 105062 1437 448 aa, chain + ## HITS:1 COG:Cj0393c KEGG:ns NR:ns ## COG: Cj0393c COG0579 # Protein_GI_number: 15791760 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Campylobacter jejuni # 1 447 1 448 448 535 58.0 1e-151 MQERHYDVIIIGGGITGSALAYVLAEFSGIENIALLEKYEGLATLNSKASANSQTIHCGD IETNYDLQKATEVKRKADMIVKYCQKHGYENKFLFQGQKMALGVGESEVELIKERFEKFK ELYPYLQLFGKEELKKIEPKLVFDGRGEERAEDIVAMGVQSEVYTTIDYGAMANSFVQNA KNVEGKTCDLYLNTEVQNITKVGDKLYIRTANRLSLSADFVVVDAGAHSLWLAHKMGLGQ DLSTICIAGSFYLTKQKLLNGKVYMVQNPKLPFAALHGDPDLLADGCTRFGPTALTMPKL ERYKGCRSVPEFFQSLNFDMDVAKVIWQNFGDSEVRDFLIRNIGFEIPILGKKLFVKNAR KIIPSIREEDIYYAKGFGGVRPQVISHSQKKLLLGEARIGENPGIIFNMTPSPGATSCLG NALRDAKSACEYLGVSFDDAKFDAEMMQ >gi|257441660|gb|ACYG01000027.1| GENE 87 105375 - 106844 2103 489 aa, chain + ## HITS:1 COG:Cj0392c KEGG:ns NR:ns ## COG: Cj0392c COG0469 # Protein_GI_number: 15791759 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Campylobacter jejuni # 1 477 1 478 480 548 58.0 1e-156 MLKKTKILATIGPASDSEEMMSAMVKAGCNAFRMNFSHGTHEYHEANLNKIRAVEKSLGV RVGVFQDISGPKIRVGKLEENFKLKTGDKITFLPREIIGKKTAPGEYELCINHPEILPLM KTGEFIYLYDGSIRAKVVAVSEQGVQAVLENDGFLSSNKGVNFPNTRLNIDVITQKDLAD LRWGAAHGVNFVGISFVQSQNDILRVREILNSLGSKAKIYAKIEKFDAVENIEQIIEASD GIMVARGDLGIEMPFYEIPRIQKRIIALANARSKPVITATQMMLSMTEHERATRAEISDV ANAVLDGTDAVMLSEESAIGKNPAAVVAAMSKTIRETEKIYPYDKFNDYDFYDETDMITS STAALAARLGAGAILSITGSGRSAIKLARNRAKIDIIAIAHDEQTAHALSLVWGVNPAMV KEKTSINSLLARIISEALQRGLIEEGGTYVMTAGFQSGHPGSTDYIRIIKKDQIDFYRDA AETGFESKI >gi|257441660|gb|ACYG01000027.1| GENE 88 106966 - 107157 65 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460440|ref|ZP_05625541.1| ## NR: gi|257460440|ref|ZP_05625541.1| hypothetical protein CAMGR0001_1207 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1207 [Campylobacter gracilis RM3268] # 1 63 1 63 63 106 100.0 6e-22 MTEQYFLATKTLVALRWLYFAHIKNQHENTYAFDFMAYRGLANFLVRYCTARHDQFIAAF SDK >gi|257441660|gb|ACYG01000027.1| GENE 89 107430 - 108128 808 232 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1506 NR:ns ## KEGG: CCV52592_1506 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 231 1 231 232 255 56.0 1e-66 MKKFRSLLLCAAAATLSAQGEDKVEKITSIDIYISPFYSAKEGKPEYVHVYEPIDDLLMK NDVASLKKAIKIIEDAPDMVAPTTLMTVAARAYDLGLKDDAVFWFYAGKNRFLTFARVID IKDEMFRQTESANAAFLQLVGNVVNPYAFCDLAKQRDAAARARDWVKAHPYKAIFDEKFP SRFVDRAAALKAAEDKMDAALLRQDEFFADPAKKADFLAKRKANNADKRFCD >gi|257441660|gb|ACYG01000027.1| GENE 90 108541 - 109776 1692 411 aa, chain + ## HITS:1 COG:no KEGG:FN0155 NR:ns ## KEGG: FN0155 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 42 404 43 406 413 71 23.0 8e-11 MKKLATILALLCAAAFAKEYEYMVQSMSYSSLGQRKESTHLSYDAAARKLEQVRDTNSSD GLGSSYKEISYFDEKGDMVKFEVFGLDLKSGKWKKIEDYTESVKDGITTRESNSIADDGT RNASKTVSSYDGNATEDVRYKLAKGKWQKESMNRSVKNAWDKEELTISFKWDGKSWQPKD KTEIFYDGSGEMSGYVTYEFANGAWQNSEREMLNGDRNGSYEQIRSTFQNGAWQNATMSK HELDAAKGEEIVTSFIWNDEKRAWDNMSKQTAIKKGADLNMTSYLWDEQLKDWVKSYSNG EIYDKSGERPLVQSHESNSSSGKYVYSYDKHGSNTAMDIYKLDASGKWVQTGRSEATYDT QIPADSVGYGAALMMFEMPSIYAITSFKEFKLKDGKSELITEQTWKYKKIK >gi|257441660|gb|ACYG01000027.1| GENE 91 110012 - 111442 1261 476 aa, chain + ## HITS:1 COG:no KEGG:FN0155 NR:ns ## KEGG: FN0155 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 96 472 36 412 413 105 22.0 7e-21 MRGVFKISPKDAADFAAANLKARAIISAGAFGVQTAVSADKLRARTAVLAGSILAATLAL AMPAGATEAAAKHSAANKICLQKTSYKTEGGAVPRYEYEVSQNYDAKTRRLEKIYRKSSE EGASVSKSFSKFDESGEREIENVEYDWDANTNKFRETAISKQEIAKDGSKIYFSLQSKDG KPYDGEKVVEKREGKTEILQNFTLKKGRWTPTYLTKRIVDESDRNNFVSTYEWNAKAKKW MPYEKSIYHYNGDVYTGSEGYAWRDKWVPLTKHTVFTATDGTRSEINFVWRDGAWGRDEK ILRKIEPKYRRFSELRSRWDAAKSEWREYYKNVHEETEESRPLREQTALWREESQRWEVV FENEFSYDASGNVIKNRTASDGKQYEYIYDYDEAGNNISIILREPDESGKWHETQRTQNV FEPEILARDVLDRGFIGDYIATGENAIKSSKQYFLKDGEYKLNETREWVYGKCEPQ >gi|257441660|gb|ACYG01000027.1| GENE 92 111459 - 111761 435 100 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460445|ref|ZP_05625546.1| ## NR: gi|257460445|ref|ZP_05625546.1| hypothetical protein CAMGR0001_1212 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1212 [Campylobacter gracilis RM3268] # 1 100 1 100 100 184 100.0 1e-45 MNEPYIVKISDSDAMMFGCEADERVREFAAKFDGWEYESEFERTSYLLGTDVFIEVASEE SLNEGTLRAQIPTEKALDADGGTTFLSLREWDGKGHSRKR >gi|257441660|gb|ACYG01000027.1| GENE 93 112151 - 112510 197 119 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460446|ref|ZP_05625547.1| ## NR: gi|257460446|ref|ZP_05625547.1| hypothetical protein CAMGR0001_1213 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1213 [Campylobacter gracilis RM3268] # 1 119 1 119 119 205 100.0 7e-52 MGDEMIKSIKFEGESIEELEVWYYAPKHEHSAAEFAQQCGKLVRADFGLASLYEIKFEKF TPCEPDDFMKERIAAALSAAALSDEPRNFAMGGENDWDWQECSFEASGQRFLRIWATSA >gi|257441660|gb|ACYG01000027.1| GENE 94 112880 - 113236 492 118 aa, chain + ## HITS:1 COG:no KEGG:A1I_07785 NR:ns ## KEGG: A1I_07785 # Name: not_defined # Def: hypothetical protein # Organism: R.bellii_OSU85-389 # Pathway: not_defined # 3 115 7 124 135 83 38.0 2e-15 MDVLQSFGREYVRQLRDGSLAWLDGVMNGRMKGARCERLYASIADFSPQQRETLRTLCAH LTDHVLHETLSFFEQSERWRLVDEAGENLAELSDGLCGELYGEDGWIEKFSGYPASLK >gi|257441660|gb|ACYG01000027.1| GENE 95 113299 - 114030 755 243 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1834 NR:ns ## KEGG: CCV52592_1834 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 235 1 233 242 87 31.0 5e-16 MKNLFLAALAALALSGCASLKCGAKDGRDVAEIDVPEDGWTRYLDTDGEVKEVAFFTAFF SKQFRPHPKEGEKIGFVLTKKSGERIPIRLGNMYKAADGAFSLADLDAEAGVWGGARELR GAKRVKFYKFQEGGVKVTDYEAQRGLCEAFYAGEKIRVKSVLSRHASKAGEASGEISAVQ TQGEISRNAVKALNSREKPSPKSSSKNLANKKSAAQKTDSEALKSETEALKNIICIIGKN EVD >gi|257441660|gb|ACYG01000027.1| GENE 96 114099 - 114524 621 141 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1222 NR:ns ## KEGG: CCV52592_1222 # Name: not_defined # Def: ecotin # Organism: C.curvus # Pathway: not_defined # 1 139 1 142 142 114 47.0 2e-24 MRKSVFFFLLPLFLFGGEAQKQLNVFQLTPSKMPPQQFKVEAIFSKEIKADCNDAYLIGG KIEQKEGSDGLYYEFSGGDELAQTLMLCDGKKQKRRIYYELTHPFAYDGGEIRILAPKDV KVELKIYELVESKEPKIRKMK >gi|257441660|gb|ACYG01000027.1| GENE 97 114541 - 114903 283 120 aa, chain + ## HITS:1 COG:no KEGG:Coch_0122 NR:ns ## KEGG: Coch_0122 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 6 115 4 113 199 145 59.0 6e-34 MQKSGFAKALCSDARSAKIPSEHDFFAPLIGDWDIWWTDGLQSGTPREVRGEWLFARVLD GSAVQDVFIVPSRAQRLANPQADAEYGTTIRIYEPANGTWDIFYGCVGTALRLTAHKEAE >gi|257441660|gb|ACYG01000027.1| GENE 98 115546 - 116241 879 231 aa, chain + ## HITS:1 COG:ECs2496 KEGG:ns NR:ns ## COG: ECs2496 COG2606 # Protein_GI_number: 15831750 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 126 227 66 167 167 125 59.0 6e-29 MSERIFESLKELLTQQGACFRLVAHESAGTSAEVAKIRGTQLGQGAKALVCTIKGFKDGQ ISFAQNLNLADNAQNPNASCVASAQGCENGACAGNLTLTADQICANVPQQLKLPSDKPAG RNGRIYVLAVFAADHKTDLKRLAQGLGGTKASLVSPDEVGDLTDCVIGSVPPFSFHDKLL LIADPSLFGRFEEIAFNAGLLDHSIILNAQDYARIAAPHIVSFTEKATEGE >gi|257441660|gb|ACYG01000027.1| GENE 99 116444 - 117061 456 205 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460455|ref|ZP_05625556.1| ## NR: gi|257460455|ref|ZP_05625556.1| hypothetical protein CAMGR0001_1222 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1222 [Campylobacter gracilis RM3268] # 1 205 1 205 205 419 100.0 1e-116 MKKVWISLLCLLALCGMENAAAKGDDAPRLEIYQSMKYIYDDLPIAQLPMRYPGEISPLA AIDKNLLDKNELFSFAKKNFLIDNLSAYRKRIKDIRACRLPEKSAKTILLRLYLMDFQDS ERGHEYVFMCLLNDAFRISDCREIYADYVHCGKSKPPMRAKQEFVIDANLRCTVTTHYYT LDAGKELHGNTCVHEIKNGAIVTKD >gi|257441660|gb|ACYG01000027.1| GENE 100 117521 - 117811 495 96 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1909 NR:ns ## KEGG: CCC13826_1909 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 96 1 96 96 103 81.0 2e-21 MKKSLLVLASFGFALSLSAADLSDSCKEYFADLDKMVDTYKQAGQEQQVKMYEDQKKQSM DQISALPKEQQEATCKQAKEMFKQMMDQMKQQGVMK >gi|257441660|gb|ACYG01000027.1| GENE 101 118149 - 119438 1707 429 aa, chain - ## HITS:1 COG:aq_782 KEGG:ns NR:ns ## COG: aq_782 COG0141 # Protein_GI_number: 15606160 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Aquifex aeolicus # 4 425 6 423 426 386 47.0 1e-107 MKILRSTDANFKEEFARLVRRGETDMRSVTPVVSGIIEEIRARGDEALVEQIEKFDRWRV QGDLAITQEQMSRAYEGLTAELKNALQIAYERIYAYHEKQLERSWFSFDPSGAMLGQQIT PVDRAGLYIPGGKAAYPSSLLMNAIPAIVAGVEDISVCTPAVGDVVNELLLAAMHVLGIK KAYKVGGASAIAAMAYGTRTIGKVDVITGPGNIFVATAKKLVFGDVNIDMIAGPSEVGII ANAAANPRNIAVDLLSQAEHDEIASSFLISDDEKFALAVAEHIERELPTLAREPIARASV QNKGAIIIARDMNECVELMNELAVEHLEIATENAYELLPRIRHAGAIFLGHYTPEAMGDY LAGPNHTLPTGGSARFFSPLGVYNFIKRSSIIALNKCAIDELGGACMALADAEGLGAHKK SVQIRFEEK >gi|257441660|gb|ACYG01000027.1| GENE 102 119586 - 121382 1031 598 aa, chain + ## HITS:1 COG:jhp1024 KEGG:ns NR:ns ## COG: jhp1024 COG0790 # Protein_GI_number: 15612089 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori J99 # 277 521 42 286 290 201 47.0 3e-51 MKKIFLALIATAVLSLAEATALSSTEQEDPGISKLRSKCDNNNTLACVNLAMAYYSGDGV KQDYEKSKELNSKACNLGDGWGCTTLGASYEYGKGAEQDYKKATELYSKACDLKNSIACG NLGVLYYSGKGVKQDYKKATELLSKACDLQEGRGCYNLGLLYASGEGAKQDYKKASELYL KACDLKHGESCHNLGILYEKGEGVKQSYQKADQFYSKACDLEVAEGCYNLGASYYLGNHT KQDYKKANELFSRTCDLGYSIGCYALGFWYASGEGIEQDFEKAINLYSRACDLGHSTGCY SLGVLYSSSESAKQDYKKASELYSKACDLGNGLGCSDLGVLYEQGKVIEQNHNKANELYS KACDLDVGEGCNSLGVLYESGKGVKQDFEKAKDLYSKACNLGDGLGCVNLGALYEQGEGV KQDYQIANKLFSKACDLEIAEGCYNLGFLYHSGYGVNQDYKKASELYSKACDLEYGIGCH NLGFLYYSGAGTKQDYEKASELFSKACDLEAGEGCDGLGHLYESGKGVKQDYRIANKLFS KACDLEIAEGCNNLGYLYESGKGVKKDKSMAKKYYGKACNLGIKRSCYTYKKLNEQGF >gi|257441660|gb|ACYG01000027.1| GENE 103 121723 - 122745 1403 340 aa, chain - ## HITS:1 COG:Cj0599_2 KEGG:ns NR:ns ## COG: Cj0599_2 COG2885 # Protein_GI_number: 15791959 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Campylobacter jejuni # 145 334 1 190 191 157 46.0 3e-38 MKTNNEEKETFWIAYADLMAGLLFVFVLLVGGIIVKYFLTQSNLQEKESQISSALASLQS QEKKSAELEALNKIFSDQLEKLNIENTDLRKQNSIYFIQIEDLTEMAEKLKKENLDINSL LQKAREDANATISQNELKIAFLLDQLTKKESDFNKILQDLNVTKNRIRNLTGMKVKIIAD LKEKLGGKIRIDNESGAMTLSSSILFDKGSSELKEGAKETLRSTLQSYFAALLNNDEIRE NLDQIIIEGHTDSDGGYLYNLELSQNRAFAVMDFINSWNKDERLQKYLIASGRSYTQPVM RRGVEDKDASRRIEIKFTLSNKEAMDEIRKFLQFDANATN >gi|257441660|gb|ACYG01000027.1| GENE 104 122732 - 124021 1222 429 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1219 NR:ns ## KEGG: CHAB381_1219 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 6 421 3 386 390 327 44.0 8e-88 MDRPNNEVLDITLPEAKERSLAGVFFKIAALPIAVFVVFLLGYLGLIGLKVETHSILMLA VLLIIALILARHNAEYGCLNFQNNIDDFKRELKNYIVANLLSIGGKKKSDASFDLFVDEY GYSLRNQNYASVASAVFPMLGILGTFISIAISMPHFSSNNIDGLETEIAQLLGGVGTAFY VSIYGIFLALWWIYFEKKGISKYERLLIKYKNSTKNFFWNKDEITQGYLSEILNANSEIS RSFAMMSSTNFTERLNRLIDEKIGAFESVMEAEKRSMAITQEELEKAGEMIQRTNLAHGE LDKSFAQILSALKSVSASLIEIQNGISAQYLSQSKALTDGQGELANVTSALSAQIKSLNA SLGGFAGEISSSQNAYAAKIDASFKGLSADLKALLAGEDTARTSNESIIEELRKTLASID EKALLDENE >gi|257441660|gb|ACYG01000027.1| GENE 105 124023 - 125087 1200 354 aa, chain - ## HITS:1 COG:Cj0597 KEGG:ns NR:ns ## COG: Cj0597 COG0191 # Protein_GI_number: 15791957 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Campylobacter jejuni # 1 354 1 354 354 573 77.0 1e-163 MGVLDIVKPGVLSGDDVSKVYAYAKQQGFAIPAVNVVGSNSINAVLESAKIANSPVIIQF SNGGAAFYAGAACPNAAVLGAIAGAHQVHALAAHYGVAVILHTDHAARKLLPWIDELIKA NTTHKKAHGVPLFSSHMLDLSEDDLELNLATCEKYLEILSDLGISLEIELGVTGGEEDGV DNTGVDNTRLYTQPADVALAYERLGKISDRFSIAGSFGNVHGVYKPGNVVLRPEILKNSQ KFVREKFNLQSEKPVNFVFHGGSGSETSDIKAAVSYGVVKMNIDTDTQWAFWDGVRAYEA KNRGYLQAQIGNPEGEDKPNKKFYDPRKWLRAGEQSMVARLQVAFDNLNCLNRN >gi|257441660|gb|ACYG01000027.1| GENE 106 125102 - 125911 984 269 aa, chain - ## HITS:1 COG:Cj0596 KEGG:ns NR:ns ## COG: Cj0596 COG0760 # Protein_GI_number: 15791956 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Campylobacter jejuni # 1 269 1 273 273 177 44.0 3e-44 MKKVLFTALSLAAAISLNATVYATVNGKDVTEKELAPLLQGIGNVDIAALNAEQKKELID KGIDLMLLTDEAKKSGVMDEDVYKKELEIVKDNLALRVWQAKEASKINIDDKEIADFYNK NKARFTEPARIKAAQIVVKTEAEANDIIKQLKGLSDSALFTKFAELAKAKSIDPQAKQTS GELGWMPSDQVKPFADAISKIKDGQITTKAIRSRVGYHVVLKEESQAKKQLSQSEAKPFI ERVLRQQKAAKVVEQKAADLHKNAKIEYK >gi|257441660|gb|ACYG01000027.1| GENE 107 126017 - 126652 730 211 aa, chain + ## HITS:1 COG:Cj0595c KEGG:ns NR:ns ## COG: Cj0595c COG0177 # Protein_GI_number: 15791955 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Campylobacter jejuni # 8 210 5 207 208 278 68.0 7e-75 MRSKKDILEIKKRILQNFAEERSELKFKDNYQLLVCVMLSAQCTDKRVNLITPRFFAEFP SVAELAKANLASVKLLISSCNFYNNKAVNLIKMAQAVVRDFDGVVPLDEAGLKSLAGVGQ KTAHVVLLEGAGANVMAVDTHVFRVAHRLGLSRAKTPELTERDLSEAFKTDLGKLHQGMV LFGRYTCKAIKPNCKECFLNELCSSKDKNFP >gi|257441660|gb|ACYG01000027.1| GENE 108 127101 - 128378 1654 425 aa, chain - ## HITS:1 COG:Cj0980 KEGG:ns NR:ns ## COG: Cj0980 COG2195 # Protein_GI_number: 15792307 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Campylobacter jejuni # 6 421 4 418 422 418 51.0 1e-117 MQKNEVMNDFKKLCEIPHCSCETEQMRGFLADFARSQGFSVNVDEAGNIHAVKGEPKICL QSHYDMVCVGAAPNLQLIEENGILRAKNSSLGADDGIGVAMMMGAMREFANLECLFTNDE EVGLVGANAFKGKILSPNLLNLDSEEDDRVTLGCAGGINVSAKISAQTVKKSGKIYEIGV TGLSGGHSGNEIHKNIPNATKLLAKFLAEEGCELISLDFGERSNSIPANAVCKALCTHEP KQRGLAWVKSLGEGEADVLVNSGKILALINSFAQGVRSYDTELNMVNESINLSTVKQKEG VIEFDFFGRAMKREGLENLGFETATLAGALGFEVRVADRSANWAPCISDFAHLVLEELQK QKPQAKFAAVHAGLECGVLVAKQPELQACSIGPNIHSPHSVNEHCEIASVEMIAEVVRSI IARLQ >gi|257441660|gb|ACYG01000027.1| GENE 109 128658 - 128918 384 86 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0117 NR:ns ## KEGG: CCV52592_0117 # Name: not_defined # Def: mercuric transport protein periplasmic component # Organism: C.curvus # Pathway: not_defined # 1 84 1 83 84 75 53.0 7e-13 MRKILFLMLGFTALFADKEVKIYVEKIHCPLCTTIVRKALLQTPGVISAKVSQQSKTATV AAKDDANETAMLEAIAKTGYEGVIVK >gi|257441660|gb|ACYG01000027.1| GENE 110 128911 - 129312 232 133 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_2065 NR:ns ## KEGG: CCC13826_2065 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 28 133 2 107 107 99 55.0 4e-20 MKTELENPAQETPAQKREYPGKNRFSTRSLWLIFAAIFSAVAATFCCLPALLFLIFGASF SIFSGAEALEGYRAPLSVLALFCFALSAFFFFKKPRACSLQSRRKKWILIYALLGALLAF MLTYPEILGGLYA >gi|257441660|gb|ACYG01000027.1| GENE 111 129695 - 130765 1260 356 aa, chain - ## HITS:1 COG:PM1211 KEGG:ns NR:ns ## COG: PM1211 COG1305 # Protein_GI_number: 15603076 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Pasteurella multocida # 50 355 48 366 368 298 47.0 8e-81 MQRRDFLRNTAILGAVMATPSTILGGEKVIGKKRTFGLSLNHEILEEGKQTRLWIPLPLI TKYQKVSDVKFDGNFNDPSVDYGEIPTLYAGYVGVAKPTLNIKFSVETFERNTDFSKVKF NPNEKLNPEVAKFLEPSAQIQIDGVVKQKSDEIAGGIKGDLEKARAIYTWVANTMQRDNS VLGCGLGDVKQILSSGKLSGKCTDINSVFVALCRAQGIAAREMFGIRVGASRFSAQMGAA PKDGVSHISGAQHCRAEFYLKGHGWIPVDPADVTKVRLGEKLSNDDSKLAKIREYLFGNW EMCWIGFNYGRDFTLSPRPAQFPINNFGYPYGEVDGNTLNYYSPKDFSYDYRSKEL >gi|257441660|gb|ACYG01000027.1| GENE 112 131122 - 132177 1050 351 aa, chain - ## HITS:1 COG:HI1048 KEGG:ns NR:ns ## COG: HI1048 COG1305 # Protein_GI_number: 16272980 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Haemophilus influenzae # 119 351 135 369 369 249 51.0 5e-66 MQEAKTRKFSLRFNHEISSSGAEVRLWLPLVLQEPYQRLLGEYHARSNAQESAICGDHIS TYYACFAPDKEARAGVGKYGEQGVVGEDDDYFELSFDIEISERNTDFSKVSFNENERLSP EIEEFLKPSKLIPVEGAAKQKSDEITGSLKGDLEKARAIYEWVAKNMSRDNSVIACGSGD AAAILSSGKLSGKCADINSVFVALCRAAGIPARAIYGIRTGAAQKFSPEMGVMGALSGGA LEISGAQHCRAEFYLKGHGWIPVDPADVTKVRLGENLSEDDSKLARVREYLFGNWEPCWL GFNYAREIVLNPRPAHVPIEIFSHPYCEVGGTPKDPYSPKNFIYEYFSREI >gi|257441660|gb|ACYG01000027.1| GENE 113 132284 - 133177 1012 297 aa, chain + ## HITS:1 COG:Cj0976 KEGG:ns NR:ns ## COG: Cj0976 COG0500 # Protein_GI_number: 15792303 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Campylobacter jejuni # 34 296 34 295 296 359 63.0 3e-99 MDLQKIRDENFKKLQSGQNREILSAIEALQIDKCDCECGDVVRASFNASAEQRDEILRIA RALKPWRKGPFALNDLFIDAEWQSFVKFNLLRPFLNLSDKTVADVGCNNGYYMFRASELA PARLVGFDPSALFYMQFRFIEKFLRSGAKFELLGVEHLPFYEHKFDTIFCLGVIYHRSDP VKMLKDLRASLNTGGEVFLDTMYIEGAGDFALCPKNSYSKISNIYFVPTVGALQNWCERA KFRDFEILAQKPTDASEQRKTEWIDGQSLENFLDPLDGSRTIEGYPAPRRIYVRLRA >gi|257441660|gb|ACYG01000027.1| GENE 114 133156 - 133419 63 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460477|ref|ZP_05625578.1| ## NR: gi|257460477|ref|ZP_05625578.1| hypothetical protein CAMGR0001_1243 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1243 [Campylobacter gracilis RM3268] # 1 87 1 87 87 155 100.0 1e-36 MKRNLKFCAALILVATIRSIRLEPAKFSQISRSAERKIFPREPINSIKFCENFTRFKGAD HARSSFHIGARVHEKCFKGADYALSRT >gi|257441660|gb|ACYG01000027.1| GENE 115 133922 - 134521 703 199 aa, chain - ## HITS:1 COG:Cj0809c KEGG:ns NR:ns ## COG: Cj0809c COG0491 # Protein_GI_number: 15792147 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Campylobacter jejuni # 1 197 1 198 198 176 46.0 3e-44 MQILKKAFGEYATNCYILKGEQGDLVIDPGEGSFDWVMQNTGKIAAVLNTHGHFDHVYDD AKLQRAGAKIYIHESDAFMLRADPFETMPELIEADVLVKGQEQSFEIAGFNVKFSLFAGH TPGSCMIEAGGAIFSGDVIFKGSIGRWDFPFSDAVQMRESLHKILQIKGDFTLHPGHGAN TSLATERQNLKYFLQLFER >gi|257441660|gb|ACYG01000027.1| GENE 116 134617 - 135420 853 267 aa, chain + ## HITS:1 COG:HP0329 KEGG:ns NR:ns ## COG: HP0329 COG0171 # Protein_GI_number: 15644957 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Helicobacter pylori 26695 # 6 262 8 255 260 212 46.0 6e-55 MFLDDLLPQLTDFLSERLDETGADAFVVGISGGLDSAVVSALCALTEIPTYGLILPSAGS NLENMADGIFHCESFNIPYEIQEIAPFVENFTALNPGASALRIGNFAARVRMSLLYDYSV AKRGVVVGTSNLSERMLGYGTIYGDLACAFNPIGEILKTDLFKFAKILCIDDAIIKKAPS ADLWENQSDERELGYSYEILDSVLRDIFSHEALRMKFRSGERINANDLKYLQNSRHNQEL VKFVVRRILKNNFKLREPAVARIEPAH >gi|257441660|gb|ACYG01000027.1| GENE 117 135431 - 136567 1193 378 aa, chain + ## HITS:1 COG:MJ1066 KEGG:ns NR:ns ## COG: MJ1066 COG0399 # Protein_GI_number: 15669255 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Methanococcus jannaschii # 34 377 40 386 386 198 33.0 1e-50 MKEIPFYKAQIDKKEEDLIKSALYNSDIRYSEIFEEDICKYFGVKHAISTTSGTTALHLA LCAMDIKRGDKILCSVNSFPNVAEVIRHFDAEPVFVDIDPISFNITSESLARTIDQNRHK KLKCAFISHIAGLAADIDAISEVAKSENIILIDDACRAMGATYKGAKIGALKSSLISCFQ INPQAQDAISTAGFFVTNDDEIASAAQILRNGGIVGDAFYKDGNMSFTYDVDRIGQKYDL NAINSAYAIAQFEKTDAFIKRRKQIAAAYREQLANCPHVTLPSDSEEHIYTQFIVKIDKN RDDFAKALIARGVSVSLHYVPVHLLSYYKSKYNYKVNDFPNALKNYQQILSLPIYTALSD DDVSYICEQIKEIAQNRV >gi|257441660|gb|ACYG01000027.1| GENE 118 136560 - 137666 658 368 aa, chain + ## HITS:1 COG:Cj0811 KEGG:ns NR:ns ## COG: Cj0811 COG1663 # Protein_GI_number: 15792149 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Campylobacter jejuni # 2 196 7 198 308 176 50.0 6e-44 MFKLLIERNLYDPSPAWLALGVILAPLSLLYTLIVCIKRLFAKPQKFKIPIISVGNLTLG GSGKTPLVRALFKEFNGEFKTCIILRGYGRKSRGLLEVALGGRILCDVEQSGDEAMEYAL FLRGANVIVSEDRAAGILRAQTLGFELVILDDGFSKFNISKFDILLRPQSAPKLPFCLPF AAYRYPPFFYKFADFIPAPSDIAQSFKIVSAADLQSKLNGADEILNPADEISNFAADKIS DSNLNRAADKISDLNLKTAEDKISSPKEASFERSRTILISAIAKPWRLERFLPLAKAHAF FPDHYDFKKEQILELLRREDAEHILCTAKDYVKLRDLSAEISVILLNLKLSENFIRKIQN YINQAMIK >gi|257441660|gb|ACYG01000027.1| GENE 119 137685 - 138542 1154 285 aa, chain + ## HITS:1 COG:PA5323 KEGG:ns NR:ns ## COG: PA5323 COG0548 # Protein_GI_number: 15600516 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Pseudomonas aeruginosa # 5 281 9 295 301 249 46.0 3e-66 MIKKSKTAEVIISALPYIRKFRDKIFVVKYGGAAQTDDALKLDFARDIVLLHMVGIKIIV VHGGGKKINQTLDKIGVQSEFCDGLRVTSKDAIEITEMVLSGAVNKEITALLNQNGAPAI GISGKDGGLLRAKFLDEKKYGFVGEITEVNTKLINDLLQKDYLPVIAPLAGGETDENVSF NINADLCASRIAAALKASKAIFLSDIDGVLDKEGNLISKLDAALISKLKKDGTIAGGMIP KVDACLQCVRNGANAAHIINGKIPHSILLELFTDGGIGSLIKEEI >gi|257441660|gb|ACYG01000027.1| GENE 120 138663 - 140204 1807 513 aa, chain + ## HITS:1 COG:Cj0812 KEGG:ns NR:ns ## COG: Cj0812 COG0498 # Protein_GI_number: 15792150 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Campylobacter jejuni # 1 513 1 470 470 466 49.0 1e-131 MKLVSTRDFSQKADLSYALLNPSARGGGLFSPERLPLLSEDFFKQCEDLSYKQIALKIIE SFGFDVSSEIFESALRRYDKFENSACPVQIKKLSENAYILELYHGPTLAFKDMALQPFGA LLKSIAKARNEKFLIMCATSGDTGPATLEAFADDENIKAVCLYPQGGTSEIQRQQMVKQS AANLKILGVRGNFDDTQRALKSLLADEDFKNELARANLNLSAANSVNFGRILFQIIYYLY ASIYFSKHGVLSPEQNLKQSDQCQACGKNFGGAAGANSAQSAKFNTFDVIVPSGNFGNAL GAYFAKKMGAKIGKIKIASNANNILTELFTRGIYDLRNRELIRTISPAMDILISSNVERL LSDMFGDARTSELMQSLARDKFYKLDASELAKLREVFEADFCDDTQCAKFIKQESSRGVL IDPHTATCFKLLDESRLNLVISTAKWIKFTPSMIGAIKGRACEDERADMIALSKEFRSDI PPQISRLFSAPQVHSSVVEQSEIKNAIMEWIKK >gi|257441660|gb|ACYG01000027.1| GENE 121 140201 - 140923 819 240 aa, chain + ## HITS:1 COG:Cj0813 KEGG:ns NR:ns ## COG: Cj0813 COG1212 # Protein_GI_number: 15792151 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Campylobacter jejuni # 1 234 1 234 239 271 60.0 1e-72 MIVIPARLASTRFKNKILCEFDGVPMFIKTAQNAAKADRVLIAVDEPQILKIAQDYGFDA VLTAREHQSGTDRIAEAVANAALAENEIIINIQADEPFFESENLIKFKDFAREKIAQKGA FMASCYKYISPQAAEDPNLVKLVLDNAGFAIYFSRSLIPYPRAACECYLGHIGIYAYSVR NLKRFCALPASALEDTEKLEQLRAISAGEKIAMLEIETKSIGIDTPADYERALKEFGNEI >gi|257441660|gb|ACYG01000027.1| GENE 122 140913 - 141164 208 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460488|ref|ZP_05625589.1| ## NR: gi|257460488|ref|ZP_05625589.1| hypothetical protein CAMGR0001_1255 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1255 [Campylobacter gracilis RM3268] # 1 83 1 83 83 127 100.0 3e-28 MKFDRAFLSTKFKASRLRDIKFNDNELLRNAEFNSARGIKFKTNEPLGAVFGAQGPAAER KILMRRKISAARGILKFKDASAR >gi|257441660|gb|ACYG01000027.1| GENE 123 141161 - 143167 2478 668 aa, chain + ## HITS:1 COG:Cj0586 KEGG:ns NR:ns ## COG: Cj0586 COG0272 # Protein_GI_number: 15791946 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Campylobacter jejuni # 1 644 1 644 647 718 54.0 0 MNYDEYRSAVDTLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRI GGAISEGFSKLAHGAQMWSMEDIFDDADLLAWLARGEKSGAQFYVEPKFDGASLNLTYEG GVLISAATRGDGLIGEDVTQNARAIKSVPLQIPYAGRIEIRGETLIAKSDFDALNDERAA NGESLFSNPRNAAAGSLRQLDSAIVAKRKLKFIPWGVGEHSLSFALHSQIMEFVRSLGFL RDEFCRICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTVKFPRFMVA YKFPAVEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEIARLGLMKN DFVGIIRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKLLDEGALIKCQNLDCKAR VIGSLIYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLADLEGFADKKISN LLGAINASKNAPLERFIASLGIEHIGEVAARKIAAAFGQDWLDASEDEILRLEGFGEAMA RSLAEFCKINREKILNLSEIIAPRAPQMQTVKSAFTDRSVVITGTLSRPRDEFKAKLLAM GAKVQGSVSAKTDFVLAGAEAGSKLQKARSLGVRVIDESEFEALASLATLGANPPGKSEP EALAGSSK >gi|257441660|gb|ACYG01000027.1| GENE 124 143434 - 143733 119 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460490|ref|ZP_05625591.1| ## NR: gi|257460490|ref|ZP_05625591.1| hypothetical protein CAMGR0001_1257 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1257 [Campylobacter gracilis RM3268] # 1 99 86 184 184 169 100.0 8e-41 MSIDAAASKNISNLTPLKHCTDRKNFKISASGKIKFATHGEQKFTMRSMAKFAARRGLKF EPCGAAARNFAMRDKILSSRLHKNCVSFKISPPRGEKTK >gi|257441660|gb|ACYG01000027.1| GENE 125 143730 - 144908 1055 392 aa, chain + ## HITS:1 COG:Cj0588 KEGG:ns NR:ns ## COG: Cj0588 COG1189 # Protein_GI_number: 15791948 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Campylobacter jejuni # 221 383 86 248 253 172 54.0 9e-43 MRFDLLVANTLKISRNQAAALIKQDKILLRGAVQNRPSAQIAPEQSGEISAIDQIYVSRG ALKLAGFLDELAENGLLASCGANLPSAAAEILKPHSGAKSADSKAAATQKAGAVTTQISS ADFAATDKILSADEATKIPSATATKIAETNTKAIRNAKTSADTAVLLQTGADKQTVEFLQ TGKGAEMAEILNAAKASKSGGKAGVCRRESSTGAIQTKPSQKDILNLAGADVLDVGSSTG GFVQILLQCGAKSVTALDVGSSQLSEILRRDPRVIVRENTDIREFASEKKFDLITCDVSF ISLNLILKSLASLAKNALIVLFKPQFEVGAEIKRNKKGVLKDEKAVRAARAKFEQLCAEL GLAVLHASACKITGKEGNREFFYLLKRMNDEI >gi|257441660|gb|ACYG01000027.1| GENE 126 144898 - 145410 550 170 aa, chain + ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 7 169 6 174 177 73 31.0 1e-13 MKFKNLIILAFCALFLGACAKSLSPKAPLVKNFDIAKFSGGWYEIARMKGGGELQNTAYE CFIDKNSTINLLKTAKTSSGKIENEQHVLEFAGDKSVGLLYQKGLISDSLYRVAQVDGDY RYALIFGADTSELYILSRTKTLPEPIRILYLKKAKHSGYDTKKIIWTKQQ >gi|257441660|gb|ACYG01000027.1| GENE 127 145410 - 146792 782 460 aa, chain + ## HITS:1 COG:Cj0589 KEGG:ns NR:ns ## COG: Cj0589 COG0196 # Protein_GI_number: 15791949 # Func_class: H Coenzyme transport and metabolism # Function: FAD synthase # Organism: Campylobacter jejuni # 119 456 5 279 284 212 37.0 1e-54 MANQKSCKDHTKASLRNFKEQNFVAQNSSLQNFTERNSTSNGGNSSKSIEHPKQELRENK TGDAHRADEADTDAACSNETAYGSTCDNGVDAQAQGMLPACAEVLRARLSEQFTRGEFFA TLQGANREEVRAVAIGNFDGMHLGHQKLFENLGEHGAIIVILAGGGTKLTPFASRQAFTD KKIFYCDLRAIKSLSGGEFIALLRQNFINLQKIVVGEDFRFGRDRAWDVEFLRREFRGRT CVVGEFCLSGGGVHSSRIKELLSRGRCEEAAELLGRDYEICGRIVRGQGRGAREFVATLN LDASGYFMPKSGVYATLARAESKEFASVSFLGHRLSTDGAFALETHILGDFAGFEVGLNS AQDHAPCCGGQTAHSARNLDEISACNSVEISTQNFAASESLRAKNKNLEAVDKNGGVKFV CVKFIKFLRENQNFTDLAQLKEQILKDASEAEAVLRSYKF >gi|257441660|gb|ACYG01000027.1| GENE 128 147643 - 148347 884 234 aa, chain + ## HITS:1 COG:Cj0590 KEGG:ns NR:ns ## COG: Cj0590 COG0500 # Protein_GI_number: 15791950 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Campylobacter jejuni # 1 234 2 235 236 260 55.0 2e-69 MKDEIFKEPIKKQFEFDASVASVFDDMIGRSVPFYEASTRLSSELLARILPQNARVIDLG CSTATALLALFALRSDLRLCGIDSSEAMIQNARAKAAAFGAKLELSVSDVLDASLADCDA VILNYTLQFIRPPRRAALVSKIYDGLREGGVLIFSEKIVYEEPALARQMIEIYEDYKRAQ GYSRYEIAQKREALENVLVPYTEAENRALALSAGFKRVESIFKWANFMSFAAFK >gi|257441660|gb|ACYG01000027.1| GENE 129 148813 - 149085 361 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154149212|ref|YP_001406498.1| ribosomal protein S15 [Campylobacter hominis ATCC BAA-381] # 1 90 1 90 90 143 80 1e-32 MALDTAQKAQIVAKFARREKDTGSAEVQIALLTERITLLTTHLQANPKDFSSRLGLLKLV GQRKRMMKYLKNKDYAVYSKLVSELNLRDK >gi|257441660|gb|ACYG01000027.1| GENE 130 149190 - 149603 589 137 aa, chain + ## HITS:1 COG:Cj0883c KEGG:ns NR:ns ## COG: Cj0883c COG1959 # Protein_GI_number: 15792214 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Campylobacter jejuni # 1 137 1 135 136 134 54.0 6e-32 MLFTKASEYALLSMICIAGKEESMDVDSISSELGISRSFLAKILQNLARAGLLNSFKGAK GGFVLARNADKITLSEIIKSAERRKATVFDCTAEGIDACPNGRTLCRVNLMFGELQEKVD EYMDTITLADIIGKERK >gi|257441660|gb|ACYG01000027.1| GENE 131 149600 - 150652 1174 350 aa, chain + ## HITS:1 COG:Cj0881c KEGG:ns NR:ns ## COG: Cj0881c COG2404 # Protein_GI_number: 15792212 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase (DHH superfamily) # Organism: Campylobacter jejuni # 1 349 1 345 348 396 59.0 1e-110 MKIYHLSHTDLDGYGAQFVAAHYLTDVEFFNANYGKEINEKFDLILAHIDERLAVDADEK SLVLITDLNLLSAQCEKFSGEIARRNARVILLDHHQSGLECAKKFPWYFLDSSRCATKIT YDFFSAMFGGSPRLDKLVRVVNAVDIWLKDESEFELGKVCLGMVSGAKEINKIMFERESR DYIFFLLEKIFKFQDEPSAHIALDSALHGIKKEFFKIERDDTLSNLVSHFVVDRLSAQKQ RFEIRYLDKKGILTYNIGNVSVIGNDFLTQNPDVDFFIDVTSKKTLSFRADGKIDVSEMA KLLLGGGGHVNASGGMFAGFKDASSYEAVKAQIVDLIEKKTQISKEEDEK >gi|257441660|gb|ACYG01000027.1| GENE 132 150642 - 150884 504 80 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0934 NR:ns ## KEGG: CHAB381_0934 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 6 77 3 74 74 70 50.0 2e-11 MKNNDEKIAEQDLIYEINILLDAMLLYAGVRRERLADAAQLYIENIDTVLANSDASGADE VIAVVEFLRDKHAELFENKG >gi|257441660|gb|ACYG01000027.1| GENE 133 151340 - 151840 -220 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460504|ref|ZP_05625605.1| ## NR: gi|257460504|ref|ZP_05625605.1| hypothetical protein CAMGR0001_1271 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1271 [Campylobacter gracilis RM3268] # 80 166 1 87 87 160 98.0 4e-38 MSILSTHCFLFYFTTLHLIGTLLCKRLISRYFVSKCSTQAFYFTMPGFATIECRVRLISL RSDVTTPAPYLAIIFYQARLLKSFRRGSFSLRNDKSILKCHLCAFADKILPSFQSELCHF SKLRRYAISLILDGRIVFLNLKSTICALFAPHWQAESAPLYLNFAL >gi|257441660|gb|ACYG01000027.1| GENE 134 151949 - 153142 1397 397 aa, chain + ## HITS:1 COG:VC0488 KEGG:ns NR:ns ## COG: VC0488 COG4663 # Protein_GI_number: 15640515 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component # Organism: Vibrio cholerae # 12 347 21 356 359 384 53.0 1e-106 MKKIFLFACLMLLGSQLFGDDKVYRLRLASTWEATTPVLGAAAEDFKNYAESLSGGRLQI RIDTPSKHKASFGIFDFVKSGQYDLGYTSLYYYKGKDAKTMLWTAVPFGMTTDEQHAWYY YGGGRELNDKMFAQYGMKTFLMGSTGMQMGGWFKKEINSVADLQGLKFRIPGLGGEVMSK LGATINTVPTGELFMALEMGTIDAVEWVSPVYDMPLGFHKVAKYYYTGWQEPMGDCQLLV NQKALEKLPADLQAILEAAARLAGENFQNKGFYENARIWAELKAQFPDVQVRDFPADVIA ALKKATNEILDEEAAKDPMFKEILDSQRAFLKIGREWNKISTVAYINNVSGIAGESAANP ISAGSSGTTNSDSASSENHGAASDSNATDGKNLGATK >gi|257441660|gb|ACYG01000027.1| GENE 135 154064 - 155815 2040 583 aa, chain - ## HITS:1 COG:MJ1353m KEGG:ns NR:ns ## COG: MJ1353m COG0243 # Protein_GI_number: 15669895 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Methanococcus jannaschii # 1 550 162 673 673 422 42.0 1e-117 MMIGSNPENGHPIVAMHVQRALNRGAKLIVIDPVKTEFANRADIHLQLEPEHNIPVINAL IHAIIDEDLVNHEFVEKYTKGFEYVKEAVKDYSPEAVAKYTRLNAEDIRKAARIYATTRP AVITHGMGVTHFNHGVGGVCDISNLMLVTGNVGELGSGDLPIRGQENVQGCCDMGMLPNV FTGYKAVTDESARDWFERQWNLPKGHLNGKIGIHKTEVPDAILDGRVKFFWTMGENPVMT DPNANHFLRAISQVEMYVIQDIFLTETSRKADVVLPGACSGEKEGTYTNAERRVQHSEIV VTPPGQARQDWAIICELARRLGLGDYFTFQSPEQIWEEVRRVAPHNYGGMSYYRIKKYHG LHWPCPDENSMGGPALYLDKKFFTPDGKGNFVPVLFVDDKSKIESAKEEFAKRMNMPKDY PVMAGSVDEKTDEEFPIQLLTTRKVYEYAGGAMTRRSKTVEQGGDAIGPIAEMNPKLAER YGISQGDFIVAWSRYGYIAIKADITECIMDGIIQMSYHYWESCCNELTSGGWDLIAKTPT FKAAIQIKKIDEEEFLRIRELKRIKFQTNKVVYDDFHHHPIKF >gi|257441660|gb|ACYG01000027.1| GENE 136 155909 - 156331 481 140 aa, chain - ## HITS:1 COG:Ta0045m KEGG:ns NR:ns ## COG: Ta0045m COG0243 # Protein_GI_number: 16082475 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Thermoplasma acidophilum # 8 139 5 128 669 147 50.0 6e-36 MANKGKVICPYCGTGCQIELTAEDNYIKSATGVSDNPVNQGCLCLKGYYGWNYVGSRDRL TTPLIRKKNGKFSKDGDLVEASWDEALDLVAKKMLEVKEKYGADAIAGNYSARCTHEDNY VAQKLLRILGTNNIDHCARI >gi|257441660|gb|ACYG01000027.1| GENE 137 156725 - 157324 539 199 aa, chain + ## HITS:1 COG:ZhydN KEGG:ns NR:ns ## COG: ZhydN COG1142 # Protein_GI_number: 15803230 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 EDL933 # 4 159 2 156 175 111 42.0 9e-25 MKQHKFVICDYKRCIGCTTCMAACYSSAYERGKLAKSRLTVLRQAYGVMPTQCRQCDDGP CANVCPTGALRFDNNYIELHEEICIGCKMCTLACPYGAISSNAELMPSVNYAVEPKYYLE IESQAGAKSTAIKCDLCNGRENGPACVEVCPTSAIIMIDPKEGKHKLGFAIDYDAANAFA KDVLNGEISCVAKKEGGAK >gi|257441660|gb|ACYG01000027.1| GENE 138 157321 - 159294 1884 657 aa, chain + ## HITS:1 COG:ZhyfB KEGG:ns NR:ns ## COG: ZhyfB COG0651 # Protein_GI_number: 15803005 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 EDL933 # 68 650 77 667 672 333 35.0 6e-91 MISVYTLFIVSAVISILLYCAPKTAVKVGFGLGAISCFYAMCHFVANMGVSDSFVLGGTF LYAPKFALSPLGNFFSFVVVFIGFASSVYGMSYAEEYIGKANIGVFACLFNTFILSMLLV ISADNVFCFAVLWELMTLISSFLIIVNDGKGTLKAVMVYLGIAQIGAFCITCGLLIIANY AGSFEFAEWGKVNMPMGASVAAFILFLVGFGSKAGMWPFHVWLPQAHPAAPSNVSALMSG VMIKVALFTLVKFTLFLPLSIYFGLAVLILGAASSLFGVLYALCQHDFKALLAYHSVENI GIILLGLGTGIYGVAAGNVTLAAVGFLAGCYHVVNHAIFKGLLFLCAGSVIHATHTQNMD VLGGLAKKMPLTAVGMFIGIMGIAALPPVNGFVSEWFTYQGMLQGAKESGIFIRYAFSLA VVALALTGVLVGMHLKLYAVIFAGTPRDEKIWENAKESPLGMVLGMIILMIGCVGFGVGA HFIVDYIMQAVNSITSNREFVASLGASSITSPLGSIVSTPLIAVILCSTMLLPFIILAVM KANRDKPRETDPWACGFKYSPRMQMTGGPFTGDLRKIMDWLFRGHKRRIEQNGYFGPIEY HNHPQDIWWTMIYQPVIDWSKKVADKIGIIQSGYANLYTLYILIYLCAVLGVGFFLI >gi|257441660|gb|ACYG01000027.1| GENE 139 159305 - 160234 651 309 aa, chain + ## HITS:1 COG:STM2850 KEGG:ns NR:ns ## COG: STM2850 COG0650 # Protein_GI_number: 16766156 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Salmonella typhimurium LT2 # 6 302 2 301 307 170 36.0 3e-42 MQTIQTIFLMIFQVAVIVLVAPLFDGMARKLRAKLQSKQGSDFFQTYRDIIKLFKRGRTV PACSHWVFRWAPFFLFATSAAILAAIPITYSKDTLFGAYSDIFVILYLGALLRFVFGAAS IDSGNPFAATGGGREQMLAVFVEPVMMMCLIVVMMAAGTSNLVEIQQMVRSGQIGYQIPS FAVASIAFLWCMYVETGRKPFDLAEAEQELQEGLLGEYAGSDLGLVQAALILKQFAMIGL FLTIFEPWNFSNPLLAIIIFVLKTGVFYVAAVFIDNFGPRFRMTSSMRKISCGALAIAFA ALTLYVVGF >gi|257441660|gb|ACYG01000027.1| GENE 140 160236 - 160880 731 214 aa, chain + ## HITS:1 COG:ECs3347 KEGG:ns NR:ns ## COG: ECs3347 COG4237 # Protein_GI_number: 15832601 # Func_class: C Energy production and conversion # Function: Hydrogenase 4 membrane component (E) # Organism: Escherichia coli O157:H7 # 4 214 7 216 216 113 37.0 3e-25 MNSIDILAICMIVTSLAVFGLRNLKLSIGIYAIQTLLLVSIFFMLYSNFNAPQLRIWAIV AFFTKVIFVPGILFWLVKKLDVISEDEPVGGFFVSPVIAMGFSLAIAMTINPILLQFSLI QERIVLIAAVTVFMMGIFGFMLRNSFIKQILAYCLFENGIHLSLALMAYNSHELVELGIL TDAIFAVIIMSVLAVRFYKAYDGLDTSKASNLRG >gi|257441660|gb|ACYG01000027.1| GENE 141 160883 - 162364 1293 493 aa, chain + ## HITS:1 COG:ECs3348 KEGG:ns NR:ns ## COG: ECs3348 COG0651 # Protein_GI_number: 15832602 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 52 410 57 415 526 311 45.0 2e-84 MNSLAFILIFPLLGALILFLCPKNFKLLSTLHVLISAVTSAGLLCNVGKLLSGNAEAFYA YDKFLFLDSLGCVFLVLIAVTGFLVNLYSTTYMKWEIQGGHLDLSDLRKYYSLCHVFVFT MTLSVICNNVAFMWAAVEATTLASVFLVAIHKDKKSTESGYKYIVICSIGLAFALYATVL LYAATFKITGDGEASMLWTSIMDNAKNLNGDAAKLIFIFALIGFGTKAGLAPTHTWLPDV HAEGPAPISALLSGVLLKCAMLAIFRYYAITAQAVGFDFVQSVMLISGTITLFIAGIFLV RQHDVKRMFAYHSVVHMGVIAFALGIGGYFGLLAAIFHCLAHSFTKALAFCSTGNIARIY GHKDMSRMGGMVKIAPLTTIMFGAAVCSLVGVPAFAIFVSEFNVFKGAIASGQYIAVALF AIALVIIFIADFAHFNLASFGTPKGEVVYAKEMSLFENLPLILLCALVIIFGVWHVGDFW MLVENGVRIMMRG >gi|257441660|gb|ACYG01000027.1| GENE 142 162367 - 164103 1724 578 aa, chain + ## HITS:1 COG:ECs3349_2 KEGG:ns NR:ns ## COG: ECs3349_2 COG3261 # Protein_GI_number: 15832603 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 569 1 409 416 458 50.0 1e-128 MRGDKFIEILKTKVKVLEVTRQAEDQITVLVDRNDLPLAVKTLYYDIGGFISTMIPNDER ELNGNFALYYAISMEGGKMTEAEDFAAEDKCFITVRTLIPGSDPTFPSVTPLVPACVWYE REAFDMFGLIAEGLPDKRRLVLSDDWPDGLHPLRKDAMDYRYRPDPVDHKDEPNAEFLFP SGDGVVDVPLGPLHVTSDEPGHFRLFCDGDEIIDADYRLFYQHRGMEKLAENRMNYDQMG YLAERVCGICGYAHAIACIEAAEKAIKLEIPLRAQAIRVICLEIERLHSHLLNIGLACEV TGNYNAFMHIFRVREYSMELAQLVTGGRKTYGNVIMGGLRRDMTDNEIRKSIEIINKLDV QISEIWDAVMEDKRQIGRWKGVGVLDRKVARDFSPVGPNMRASGFKRDNRYDHPYDFFNK IEFEVAVEHGGDVFSREVVRYKELKQSIHIIRQCLHQMPQTPIMIDPQTMIRPENYALGH DEAPRGENVHWIMQGNAQKVYRWRCRAATYNNWPSLRFQFRGNNISDAALIVCSMDPCYS CTERVTLVDINSGKSKILTEKDLKKFCQDGKVSKKDLR >gi|257441660|gb|ACYG01000027.1| GENE 143 164100 - 164639 574 179 aa, chain + ## HITS:1 COG:STM2848 KEGG:ns NR:ns ## COG: STM2848 COG1143 # Protein_GI_number: 16766154 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 10 167 10 164 180 132 42.0 3e-31 MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPEYTYELCIGCAACGIACPSNAIELKMN EAQTKLIWEFDCGRCIFCGRCDEVCPTGAVRLGNSFELAVKFDKSALIQHGELEMEKCSC CGKPMTPKRLINYTLEKLSTANLLPGRLEEAKKYLYICPECKKAQAVERMTKGLEEAIK >gi|257441660|gb|ACYG01000027.1| GENE 144 164636 - 165460 588 274 aa, chain + ## HITS:1 COG:ECs3575 KEGG:ns NR:ns ## COG: ECs3575 COG3260 # Protein_GI_number: 15832829 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli O157:H7 # 17 251 25 249 255 226 47.0 3e-59 MSLYQVPENIKNANDLTAKLELLKNIKRSFSVYRIDCGSCNGCEIEIFASITPMWDPERF GFKLVANPRHADILVCTGPVTRQMYYPLLRAYEAAPDPKIVVALRACGSTGGIFHDAYSV WSGIDKIVPVDVYIPGCPPHPASIIYGLGMALGIIDQKLQKKSYEQDSTLPPPVERSVIG DILFERDLQAEAKRLMSYIFGRVLFAKYMDAIKTSSDVHDPKASREALLNAIHTEEDPRY AECMALLHNDVYLKYARATEEFKIDPQKEVWSKR >gi|257441660|gb|ACYG01000027.1| GENE 145 165457 - 165801 513 114 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0714 NR:ns ## KEGG: CCC13826_0714 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 114 1 114 114 175 78.0 5e-43 MIEVFKLTKRHMDENENLPKELKDIKVFSTCVGHGVGTIDFSEKVLEIDDEEFKRIIENS GDYVKFKIGNLSKYFEIEIFAEHAAKLIPQLCECELKDLLKNMREGYFVLRKDF >gi|257441660|gb|ACYG01000027.1| GENE 146 165801 - 166253 501 150 aa, chain + ## HITS:1 COG:STM2845 KEGG:ns NR:ns ## COG: STM2845 COG0680 # Protein_GI_number: 16766151 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 1 139 1 139 156 70 29.0 8e-13 MRKALLCIGNPLRGDDDVGNETGRIVEANLKDWHVFYGQDVPENEFAALREFAPEILIVV DAMSGFDEDKIEFFDLSNDRDYIYSTHNLPTPVLLSYLRKICPKTLFLGISVLLDNVLDF KEGLSESAKKSAQKAYERILEIDSNLNEEE >gi|257441660|gb|ACYG01000027.1| GENE 147 166254 - 167117 949 287 aa, chain + ## HITS:1 COG:HI0181 KEGG:ns NR:ns ## COG: HI0181 COG2116 # Protein_GI_number: 16272146 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Haemophilus influenzae # 2 273 13 275 284 143 34.0 4e-34 MLNPAETAQAVSSSMQHKAHTPLISIIFLAIMAGAAIAMGDIFWAHSTVGMAEKQSIGLS NFIGGITFSCGLMMVVFYGGHLFTSSVLTGVPAADGKLPLGKTIGYWAIVWCFNFVGGAL IAYMYYYSGLPLKYDGYILQHFIPAAAGKINAPFHELFIRGIFCNVFVCMSIWTATSESN LSGKFFAIMWMIGAFVACSMEHCVANMFILTEGIIAKGHYLAAAGGDVNALASSLHGVTA AQIDSINWGNFIVKNMIPVTLGNICGGLFFVGLVGFMVNKYDMKKKD >gi|257441660|gb|ACYG01000027.1| GENE 148 167592 - 168230 673 212 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1641 NR:ns ## KEGG: CCV52592_1641 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 210 1 210 215 236 62.0 3e-61 MEKSRLGLLQTEAIATLSDEELAMFEHQVIKKGYVFYSEAPKVFIFKSGQAKLSFFEDGE EFIINYLNKDNITILNEICALEFLEDSEIYTIDASGLGEILANRSFCEAYIKILTEIILL QRKITRSILFENAKGRIASFLIELANEQNFHQNGYKYVFLPFSLKVLSSFVGLKRQSAST AFNELVKDNVIQKISQHEFLILDYDRLLSYCV >gi|257441660|gb|ACYG01000027.1| GENE 149 168583 - 168840 356 85 aa, chain + ## HITS:1 COG:PM1322 KEGG:ns NR:ns ## COG: PM1322 COG3315 # Protein_GI_number: 15603187 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Pasteurella multocida # 10 85 13 88 276 60 36.0 5e-10 MQKLNFKNNVSETLLINVYMRHLDFKDRGPILNDPFSSAVVEQIDYDFAKFDDARLSKTG TVIRAKFFDDETLRLAAELDRPIIV >gi|257441660|gb|ACYG01000027.1| GENE 150 168874 - 169413 534 179 aa, chain + ## HITS:1 COG:MA3472 KEGG:ns NR:ns ## COG: MA3472 COG3315 # Protein_GI_number: 20092284 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Methanosarcina acetivorans str.C2A # 10 166 112 262 274 73 31.0 2e-13 MQKALPNALFYDLDLPDVISVRDELLPKAKNNFSLSYSMLDPSWMDELVAKHGSMGYIFI LEGVSMYFEKEEFKKFFIALSQKFSGYVLSDFMSEFSIRKFDSKRHDAMRHMQNAPFKMG ISGGAEVQSWEPERIRFIKEAAMMKMYREHWSLKARLFSLIPAFCNACKMFVFKIGGDE >gi|257441660|gb|ACYG01000027.1| GENE 151 169640 - 171052 893 470 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 8 458 3 440 456 348 44 2e-94 MQNFLDKLTATIDAINSFLWGPYFLIALLCGTGAYFTARLHLVQIFKFRMGARKLFGNFS LHGEAAGKSGMSSFQAVATAIAAQVGTGNLVGASTALVMGGPGAIFWMWCAAFLGMATNF AEICLAQIYRTKDDSGHMIGGPAFYISRGLKNPLAKPLAAFFALAIIFALGFMGNMVQAN SISDGFSSAFGIPKWVSGAALALICCVIFFGGVKAIARVAEKVVPLMAICYVLVGLVIIG SNFDKIPSVIALIFKAAFDPSAAWGGATGATIATAMRYGIARGLFSNEAGMGSTPHAHAA ANVKHPVDQAVLGIMGVFVDTFIVLNITVFVVLSTDVVTFENGKAVFSGISLVQEAFASQ ILGRSGGYGFVAICLFFFAFTTILGWYYFAEINVRYLLGAKFVKLLQILVVAFVFIGSVQ KIDLVWGLADMFNGLMVIPNLIAIILLSPVVVRLLSDFNDGKSYDANDYK >gi|257441660|gb|ACYG01000027.1| GENE 152 171199 - 171885 908 228 aa, chain + ## HITS:1 COG:Cj0602c KEGG:ns NR:ns ## COG: Cj0602c COG2258 # Protein_GI_number: 15791962 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 26 226 15 219 222 196 45.0 4e-50 MPVLKALLTGQPHAYGDEHATQPLKKRWETAIFKQARADEVRANELGFEGDAVADTLHHG GEEKAIFANSLQNYAAWERFLGLKNLAYGAMGENLTISGLHEQNVCIGDVHRIGSLVLQV SQPRKPCYKLSMRWGNAKMTAEIARSGLTGWYYRVLEAGSCRAGDEIYVVERDPATMSIM ELNRLFYGERIDKGLLAKFNLLTTLTPKWREDMRRKLEGSYDDSFMRL >gi|257441660|gb|ACYG01000027.1| GENE 153 172849 - 173820 987 323 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_2062 NR:ns ## KEGG: CCV52592_2062 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 40 323 59 339 340 283 51.0 8e-75 MRPDGIFIGGVNCEFDLAKLNEALGQPRVIDDGEGKSRYFWDEAGIFAFVRAGELAEPKL TEMILMLEVAKGVQHEVPHKLYGGAFTLEGRPPLEAVPEQELRGAYIFLELSLGKFEVSL ALAEAVQERIGAMDFAERFAKRDTDEIADIVRAAKMPIGRVCINQKEKKVKRKPSDKFKL PRAAGETLAFKNLNFKVAVMNELMYEKALLEPKFDVFEYCEERGIDPYADFGALPQAKKW FKDYPVPANLAEQVSELYLDGGNEIYLQIAPDWDGEDELFDIKNIDAAELAQFKNLKKIE TTGIDISKKARKACADAGITVVD >gi|257441660|gb|ACYG01000027.1| GENE 154 173898 - 174491 511 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460530|ref|ZP_05625631.1| ## NR: gi|257460530|ref|ZP_05625631.1| hypothetical protein CAMGR0001_1297 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1297 [Campylobacter gracilis RM3268] # 1 197 6 202 202 310 100.0 5e-83 MLLRYASVSAARIELKTIAPPKFADSADADICYTYEVNLKNGLFAADELVFLQLEDEEYY FKISPASDIADGLPNTARGKTAESMSGEAAGATARDTVVATVANGAENRASGDEARAERS PDVARNINAEAPDETTCKTAGATTSEAADEAASGATKEIASERAGAAPCEYKVYVRDYAE GEDRLFADDFYGFLEKF >gi|257441660|gb|ACYG01000027.1| GENE 155 174833 - 175210 595 125 aa, chain - ## HITS:1 COG:BH0063 KEGG:ns NR:ns ## COG: BH0063 COG0251 # Protein_GI_number: 15612626 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Bacillus halodurans # 1 124 1 124 124 135 55.0 2e-32 MQIISTPDAAQAIGPYSQAIKAGGFIFTSGQIALKPDGEFVAGGVEAQTRQVLQNLAAIL KEAGATLQDAVKTTIFLADMGDFAAVNEIYAAAFGEHKPARSTVQVAKLPKGALVEIEVI ALARA >gi|257441660|gb|ACYG01000027.1| GENE 156 176457 - 177218 1013 253 aa, chain - ## HITS:1 COG:Cj1468 KEGG:ns NR:ns ## COG: Cj1468 COG0730 # Protein_GI_number: 15792785 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 8 248 11 250 254 197 48.0 1e-50 MELELWQFAVLFAAAFFGGFIDSIAGGGGLISLPALLAVGIPPHVAIATNRFQGSFGSFT AALNFIRKGYVDVAEILRGVVFTFIGGLVGAYVLLLIDAKFLNYLIPILLLALFFYMIFS PNLGEAPAKPKMSKKSFYAIFGLVLGFYDGFFGPGTGSFWTFALVGILGLYMKKAVAHTK VLNFTSNIVSLGVFIIGGQILWLVGAVMAVGQIAGSFAGSSLVMRCDVKFVRKMLLFVVA ATILKLLYGLIAN >gi|257441660|gb|ACYG01000027.1| GENE 157 177692 - 178480 770 262 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0721 NR:ns ## KEGG: CHAB381_0721 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 250 1 250 254 344 67.0 2e-93 MKSLKQILDYYADLKNCDADLFGAPDPLQVAKGHRNDVVALICALFAYGNAAQILKFLRS LDFSLLDESDECIGAELAGKKYRFQSPRDVAEIFITLKRLKNSLSIEESVLRGMQKNGRI EDGINFLIGEIYRLNPYRSQGYEFFFGRGFAQRPASPYKRYNLFLRWAVRDSDIDLGLYK KIEKSRLLIPLDTHTHKVSLKLGLIDRKSYDFEAVLQLTQSLRRFDPSDPIKYDFALYRL GQSGEIDKILPVLSASLDKTAK >gi|257441660|gb|ACYG01000027.1| GENE 158 178477 - 179937 1341 486 aa, chain - ## HITS:1 COG:Cj1461 KEGG:ns NR:ns ## COG: Cj1461 COG0742 # Protein_GI_number: 15792778 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Campylobacter jejuni # 11 118 42 149 227 100 50.0 7e-21 MAKFSKPDGALFTQISSGIYKGKKLALPALSSTRSTKSIVKGSFFDTWRAELRGATFIEC FGGSGAMALEALSNGAKNVYAIEKDAVAHKIMRKNFELFGLGANAILGDCFERLPEILHE LQAGTNGCSGANSLNLSGKNFKNHANDDACCKNSSSEKEGCRKSFSSVEQGKNGYRAAQS IEAEDNAQSGVKNLAKCGTGNGAPDSAQNGAQSGTNGDHASEGFGDCARIGDYAGASSIK YCVNSLATDVASFSEKFDDNCASQYDASGTETANCNLNLNSKCGESSNFDVNRGAGLDVG CEEKKSLNLGENFDSSCRKSLHSSANFVYDSRKNSTENSDGKFSPKCEENSRPNVNLTRG SRKNSAANSRENFSCGLGESSTANGLGECSAVNFSESHTANSSENSVSDPARRVFVYLDP PFAIRQGFGEIYERVLALIARLGSVQCELLIAIEHMSELELPPKIGDFALLKSRKFGATT MSYYAR >gi|257441660|gb|ACYG01000027.1| GENE 159 179930 - 180256 356 108 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0780 NR:ns ## KEGG: CCV52592_0780 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 106 1 113 114 82 44.0 5e-15 MKAFIDCDCEILQKTLELFLKDHAASAQDCDFVISDEPQSSAKPLFLISEGGDLTLPFSK NTLLSKLEDFQGLLKRNLSGYDAAEEEICALFDEFKTRIIEILRRQNG >gi|257441660|gb|ACYG01000027.1| GENE 160 180256 - 181353 770 365 aa, chain - ## HITS:1 COG:Cj1236 KEGG:ns NR:ns ## COG: Cj1236 COG1565 # Protein_GI_number: 15792560 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 1 363 1 315 316 191 36.0 2e-48 MKFSDFFEGWLNERYYANAAKIGKSGDFYTAVSVGSFFGICIAHEILRLSADFGATQALS LDAATSPIASRQNFAANPGEPNLDIVLAEKSQNNAKIAIVEIGSHDGRLLCDIAQAIFTL GGVAALNRFSFAIIEPHERLRELQRASFVECFGGEIALKHFASAREAKFKDVIFVANELF DAFKCEAVDGENMLFIKSGAAKFAPIKEGEILTIARRFGISRGEIPVGYFRFAREICASA QRFYFIAFDYGQMGASGDFSLRIYRNHEVFSFFEVQNLSDFYGKSDLTYDVNFEILRAAF EDAGAAATDFKRQIAALMDFGAVQLLELFMQKSGEKGYHNALLQFNHLRAEFGEKFKMIK FKKGL >gi|257441660|gb|ACYG01000027.1| GENE 161 181350 - 182519 1654 389 aa, chain - ## HITS:1 COG:MJ0721 KEGG:ns NR:ns ## COG: MJ0721 COG4992 # Protein_GI_number: 15668902 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Methanococcus jannaschii # 3 386 13 392 398 288 46.0 1e-77 MNYLMDNFARVNVALVRGEGSIVYDEAGKDYVDFGAGIGVNCLGHANEIVLEAIGTQAAQ IIHGSNIYRILPQEALAQKISELLGYRTYAVFCNSGAEANEAAIKMARKYGTVNFPNKKF EILTLRNSFHGRTLATLQATGQEKFHPEIFAPYMPGFKFFDDIEEIIAHIDENSVAVMIE LVQGEGGIKPLDKASVQKLAAVLKERKLLLITDEVQCGVYRTGEFATSQIYGIRPDIITF AKGLAGGVPIGACVAQQNIFAPGEHGSTFGGNFLATSTALAVLSQLQFLKASGKLDKTIK RFIKKLDAIAADYPSLIEKRVGLGLMQGLVLRDEKNLGEIFNKALQNGLLILKSGKRTLR FLPALNIKKSEIKEGFARLRKSLDEIVRA >gi|257441660|gb|ACYG01000027.1| GENE 162 182516 - 183133 872 205 aa, chain - ## HITS:1 COG:PA1037 KEGG:ns NR:ns ## COG: PA1037 COG2860 # Protein_GI_number: 15596234 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 3 204 2 201 206 91 29.0 1e-18 MSILELTECVGIASAALSGFLFGVKKGCDWLGIFIAAFLTALGGGIMRDTLVSREIYSFT HYAPVTIVLAVSAVAIFAKLYENRDLEGKFLFILTDAIDVISFSIVGAMVALSYNHNVFG VVLIAFCNGVGGGILRDVLLNEVPWFLHTGLYGTISMGVGLIYFVLDGLGLSGVVSVLIL LVLGVAFRMMAYYKSWHLPKVEYKK >gi|257441660|gb|ACYG01000027.1| GENE 163 183691 - 184737 1068 348 aa, chain - ## HITS:1 COG:all8511 KEGG:ns NR:ns ## COG: all8511 COG1073 # Protein_GI_number: 17232884 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Nostoc sp. PCC 7120 # 133 345 23 234 245 65 27.0 2e-10 MRVLLRLCVIVACLYAAIAAGLYIFQERLIFLGEPLDKNFKFSFENSEFTGLVNAPESGA HLDMRASATQNSASTKSSADEGASAASGTKESGAAAGEIKSENTQTSSERVGENTSQDAA TGNNANVAVIKFQEINIPFGGGSINGLKFSAAEPKGAILFFHGNFGDVSGWGAYGADFAA LGYDFYIFDYPGYGKSDGKISSQQQLFTSADAMSRYVLAQHSPRKLAMIGYSIGSGIAAQ QAAKWDATRLILLAPYFSFERLAHEKIPFVPKFLIRYKIPTAEFLQAARGTQITLIHGAA DELIPVQHCRDLAGSLKAGDLFYEIPNARHNGLLAMPRIWEILKERLQ >gi|257441660|gb|ACYG01000027.1| GENE 164 184805 - 185392 689 195 aa, chain - ## HITS:1 COG:Cj0447 KEGG:ns NR:ns ## COG: Cj0447 COG0494 # Protein_GI_number: 15791811 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Campylobacter jejuni # 6 192 4 190 198 146 41.0 3e-35 MDTTIKNFKISELKSSNFVKPFRLNFEMDGVARAWDCVKVHDSVSILLYHTQRDALLLVK QFRPSVWFYQEENLINSPEKGYTYELCAGILDKGISEEQTAIEEVLEETGYAVKDLKFIT SYYSALGFAANRQILYFACIDESMKLGSGGGVDGEKIELFYLPAAKVREFMFDEKIVRAP GLILAFQWFLSEFKA >gi|257441660|gb|ACYG01000027.1| GENE 165 185377 - 186756 1768 459 aa, chain - ## HITS:1 COG:mll1318 KEGG:ns NR:ns ## COG: mll1318 COG2239 # Protein_GI_number: 13471369 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Mesorhizobium loti # 24 456 45 465 470 257 37.0 3e-68 MENKEQLDDVEEAKALLDAHLDDTLEHELSAADLTEHLKTLKKHDEEKYVEFLKKLDPED LADAALEMPEHMLEDVIETLPHEKIVKAIEELESDDQAELLQNIGEIDEDKAEQIFYGLD EDDRHDILTISKYSEDEAGAYMQTEVFSARQDQTLGQAVEMLRVMREKDEIENVFQLFVL DKKGHLLTTFSTSDLILYDFSLTLEQISQKFGAENKIHFATDTDKIDDVIKDFEEFDLNV IPVVDANGVLIGRITADDIHDLIQERATEQIYNLAGVDDEAEDDETTIFKAGRARAVWLA VNLCTAIVSSTIIGLFDATIEKLVALAVLMPIVASMGGNTGTQALTVTVRRLALGEIAFK DKKQVLFREITIAFINGLIFATLMGFVAYFWFGIKLLGLVIAMSMVLNLTLAGLFGAVIP ITLKKLNIDPAVGSSVLLTTVTDIVGFFSFLGLATWILL >gi|257441660|gb|ACYG01000027.1| GENE 166 186765 - 187934 1122 389 aa, chain - ## HITS:1 COG:Cj1215 KEGG:ns NR:ns ## COG: Cj1215 COG0739 # Protein_GI_number: 15792539 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 5 386 4 384 386 368 47.0 1e-101 MTRIFILLFLWIGVVFANNPSVEKFAWPDGVSLLQFMETAGIPASVYYDLDKEDQELAAE VRAGVECQILRDPAGRVSQLLIPVSEELQIHIYRDKFGTFRFVYTPIVYEENSYSLGIQI ESSPYQDIIKATGNAALANEFMLVFKNEVNFKKLQKGDRLVILYEQKTRLGKPFGGVNIT AGMIEENKKPKSLYFFDDKYYDRSGKKVESFLLITPLVYTRISSYFTPKRFHPILKRYRA HLGVDYAAPKGTRVNAAGAGKISFVGRKNGYGNTVEINHGGGISTLYAHLSGFASGTKAG VSVKQGQLIAYVGSTGLSSGPHLHFGLYKNKQAIDPLKVVKIEKTNVISAEELKFKALVK DMDARMAAAKDGSKNPAKFENYESLITIN >gi|257441660|gb|ACYG01000027.1| GENE 167 188136 - 188801 754 221 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1628 NR:ns ## KEGG: CHAB381_1628 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 216 22 237 239 298 63.0 1e-79 MPRYETALLSVADGSGEITDSPTIAVGSSGVVMHNFGSGASSIIARAVVTQKSAGKAKVR FEVFDMLAQEALPLPKILPSSGDKVILNFLYNRAIIVAPNAEIYEQVIKAFPNINFIHPD LGGAYLSYNHKPNPSRDDFRKICAQNSAGLIFIAMDKQGVFADCGSFKPLRTFASGSVAY YQLPFYSRVGEIKTVIWDFTNGPISDYDKHYRYLLGLDGDE >gi|257441660|gb|ACYG01000027.1| GENE 168 188794 - 190176 1428 460 aa, chain + ## HITS:1 COG:Cj1213c KEGG:ns NR:ns ## COG: Cj1213c COG0277 # Protein_GI_number: 15792537 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Campylobacter jejuni # 1 460 1 460 460 676 70.0 0 MNSAAQAFFTNLLGADNAYFDEAHRTAYCYDATKRRCLPDGVLFPRSEDDVSQILKFCNE NLIPIVPRGAGSGFTGGSLAANGGVILAFEKHMNKILEIDMQNLLAVVQPGCINIDLQKA AAVRGLFYPPDPASQDYSTLGGNVAENSGGMRAAKYGITKDYVMALRAVLPNGEVIRAGK RTIKDVAGFNVAGILIASEGALAIITEITLKLIPMPKLKKTAMGVFPSVDAAMNAVYKTM AAGITPVAMEFLDALCIAAVEEKFHKGLPRDAGAILICETDGNLEAVLLEELALIKEIFV QNGASDFRIAESEEERAGIWFARRNCSQAINIYGTLKLNEDITVPRSQLPELLRRIARIG DKYGVRVPCFGHTGDGNVHTNVMVADKKDEAQVRRGHDAITEIFKAAVGLGGTLSGEHGI GLSKAEFMPLAFSAAEMELFRAIKRAFDPKGILNPGKMGL >gi|257441660|gb|ACYG01000027.1| GENE 169 190817 - 191200 264 127 aa, chain - ## HITS:1 COG:Cj0413 KEGG:ns NR:ns ## COG: Cj0413 COG0790 # Protein_GI_number: 15791780 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Campylobacter jejuni # 2 127 80 205 234 58 29.0 3e-09 MRAGSPKACYNAAIISYKNADKKNTFAFFAKSCDLGLGEGCLNAAVASYEEKDYQGALKF FLKSCDAALAEGCQRVGLAYSKKEFGEPDLDKAMIYYDKACKLGAEFSCNVVAAMNKINA SEANATK >gi|257441660|gb|ACYG01000027.1| GENE 170 191158 - 191502 420 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460553|ref|ZP_05625654.1| ## NR: gi|257460553|ref|ZP_05625654.1| cysteine-rich protein H [Campylobacter gracilis RM3268] cysteine-rich protein H [Campylobacter gracilis RM3268] # 1 114 1 114 114 215 100.0 1e-54 MKILASITALIVAAYLLAQIFFPQGVSFVGCGIGRANSCEDYGTYLLEERDYEAAKKPFE KACEAGLENSCAIAGDLYYDEQNLYKTTKDKGKSARFYSKACELGAPKLATTPR >gi|257441660|gb|ACYG01000027.1| GENE 171 192279 - 192647 582 122 aa, chain - ## HITS:1 COG:no KEGG:Coch_0018 NR:ns ## KEGG: Coch_0018 # Name: not_defined # Def: ethyl tert-butyl ether degradation EthD # Organism: C.ochracea # Pathway: not_defined # 1 119 1 121 245 112 49.0 3e-24 MFKITMLVKRAPGITQQEFVAHWAAHSQKVLVNQKGLNIVRYAKTMPIFIEGQSTKRETA AFNYDAMGELWYESVQAFADARNSEAARAVLAELMADEARFCDMKNSVMWFGEEEAVIEF EH >gi|257441660|gb|ACYG01000027.1| GENE 172 193110 - 193502 397 130 aa, chain - ## HITS:1 COG:Cj0635 KEGG:ns NR:ns ## COG: Cj0635 COG0816 # Protein_GI_number: 15791995 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Campylobacter jejuni # 3 127 4 126 127 118 50.0 2e-27 MIVAIDLGLKRIGVAAAPDDKTPLPCEPILRKNRTQAARELSELLREKGASVLVLGVPRG GASEEEMSRRIRHFASLLDFDGEIKFQDESFSSAEAAEFASKCAKGGGKDPRFDSIAATI ILQRFLASMG >gi|257441660|gb|ACYG01000027.1| GENE 173 194341 - 195129 852 262 aa, chain - ## HITS:1 COG:Cj0634 KEGG:ns NR:ns ## COG: Cj0634 COG0758 # Protein_GI_number: 15791994 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Campylobacter jejuni # 26 256 25 250 257 233 50.0 2e-61 MSTTSELSFKIQSLARLGASEPAQLYFRGEPALLQKRRISIVGSRKMSVYSKNLILRLAR ALSDADFCVVSGAAIGCDIAAHEGAFPNTIAVFGNGLDQIYPAQNAAMIGKIYERSLALS EYEDGVSARGFQFLQRNRIVVALSEALIVAQAEPRSGSLQSARLAREMGVPVYVLPHRMD ESAGTNDLLAKSQARLIADFGEFVASLAPQTPQNTERTQDEVMEFLAINSDLQAAIERFG DKIYEYELEGRIEILGAKIVAK >gi|257441660|gb|ACYG01000027.1| GENE 174 195113 - 196318 866 401 aa, chain - ## HITS:1 COG:Cj0633 KEGG:ns NR:ns ## COG: Cj0633 COG2861 # Protein_GI_number: 15791993 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 186 397 146 358 360 165 43.0 1e-40 MANANPRGHRKKRPINYIAIAFVVILCFLSGAVTYAVLDLVFSGNKAALQQSSRKQASKS TSDPRGKKPRLSAAEKEALIQKELDKIAEQNVTAPKMSIEPARQNSAGQNLVRQNSSNGD SQNSANSMASANSAAVNSAGDGSDVNFTAANSASENSINSTAQSPASGSADDLSKSPRKA LPAGSRAKLAIIIDDVGTDEQAQKIAALPVRVTPSIFPPEYQRKDTRSLARGFEHYAIHL PMEASSAKNNSATLRASDNYEKLRGVIAKLRADFPNAKFINNHTGSKFTADERAMQNLLR AMNEHGFLFIDSRTSPATKAKAAMNGFGMRYVHRDVFLDNQNSVAAVRKKLREAVALAKK QGYAIAIGHPKSSTLRALANSSDILGEVDLVYLDEIYEYYE >gi|257441660|gb|ACYG01000027.1| GENE 175 196332 - 197354 1476 340 aa, chain - ## HITS:1 COG:Cj0632 KEGG:ns NR:ns ## COG: Cj0632 COG0059 # Protein_GI_number: 15791992 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Campylobacter jejuni # 1 340 1 340 340 520 75.0 1e-147 MAINVFYDKDCDLGLIKAKKVAMIGFGSQGHAHAENLRDSGVEVIVGLKKGGASWSKAEA KGFKVMSVGEATKAADLVMILTPDEFQNDIFKAEIEPNLSEGNAIAFAHGFNIHFGQIVP PKGIDCIMIAPKAPGHTVRNEFVSGGGVPMLIAVSQNESGRAKELALSYASAIGGGRTGI IETTFKAETETDLFGEQAVLCGGLCALINAGFETLVEAGYEPEMAYFECQHEMKLIVDLI YQGGMADMRYSISNTAEYGDYVSGNRVVNESSKAAMKEVLKEIQNGKFAKDFILERKAGY VRMNAERNITANSLLSKTGEKLRAMMPWIAKGKLINKDKN >gi|257441660|gb|ACYG01000027.1| GENE 176 197493 - 198449 811 318 aa, chain + ## HITS:1 COG:CAC3252 KEGG:ns NR:ns ## COG: CAC3252 COG0345 # Protein_GI_number: 15896497 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Clostridium acetobutylicum # 93 317 38 265 270 149 39.0 9e-36 MKVGFIGGGNMGEAMIAALCGAGGRDCAASGENFAEYKENFAHGGRNFISDTQNFTACER NSANLEQDFASHERDSACAQSDSDTKLQVLAYARSKNEALRKRYGVQILQDEAQLAHAAD MIVLATKPASYEGILRLIAPELAGKILLLLAPNFKLERAQNIVGADVLVARAMPNVAAGI GASATALCYGEYFDEASREIVRALAAKIGKFYEIDEACFAAFTGIAGSLPAYVCAFIEAA ADAGVRGGLPRALCYDAVAAAVEGTARLVQSGKRPSELKDAVCSPAGTTIEGLAALEAAG FRAAVMAAIEACIAKARS >gi|257441660|gb|ACYG01000027.1| GENE 177 199142 - 199780 725 212 aa, chain - ## HITS:1 COG:no KEGG:Bacsa_0467 NR:ns ## KEGG: Bacsa_0467 # Name: not_defined # Def: hypothetical protein # Organism: B.salanitronis # Pathway: not_defined # 19 211 12 207 208 87 30.0 5e-16 MTKDQCCVLKHLTAGETGGFEKIGEMNDGEFLNALIGKGLVWMLDWAGEDETGDVGKFIS SRLGALQSGVSLECDKIYARLEKEAKKEDFERGDASLFLMNEFQKALKKSYFRLFTLDLH SDAYYLLVAHKDAEKDFKKLGKREELFWDIAPWGKRRKRQILYVINCECGEMSAWQLDAD EPSPRDEVCEVCGRVLFDADGNAMQPLEKEFI >gi|257441660|gb|ACYG01000027.1| GENE 178 199956 - 200678 737 240 aa, chain + ## HITS:1 COG:no KEGG:Celal_1460 NR:ns ## KEGG: Celal_1460 # Name: not_defined # Def: hypothetical protein # Organism: C.algicola # Pathway: not_defined # 10 239 4 234 235 215 45.0 1e-54 MQMDLQEKIKELQRKIAREITYFQTGGVRPRGAIDECWIGRVLACAADEELPVDQNDAPM LPLAQFYLPALPYVPQILDGVKLLTVFISQDLIGKFDDDMDGLWAIREYSDVSELVIKEL SNPRSQIRPFPLQPKFAADDTPVWDGGGLEPDVVHEILELKRSVGLYYSDVTAGLEYYNC TKLGGYPSFCQSGVSFGEGYQFVFQVSSDEKANFNVIDGGSLMFAKNPQSGAWSLYYDFD >gi|257441660|gb|ACYG01000027.1| GENE 179 201006 - 201815 1111 269 aa, chain + ## HITS:1 COG:no KEGG:MSMEG_5752 NR:ns ## KEGG: MSMEG_5752 # Name: not_defined # Def: hypothetical protein # Organism: M.smegmatis # Pathway: not_defined # 13 143 2 151 159 92 41.0 1e-17 MNANELANIWRKPIYLPYLQDPLTPEALRAAEEELGHALPRELVMMLSVQNGGYLRYELE GYPLDAVSGIGEAHPSLTRFSWGEERECVSFELDGLVPFSGDGHWYLCLDYRTSEQPAVA YIDVECDEQSIIAQDFASFLALLRLDASGKLALQTGLDLDGTKARLEEILSVRAKAADPQ LYGFIVYNFAREGGMLSLSPNEVRLGFTRRGERRFKELKNFSEPALRYAELDASAMILDV FKEELMGEILRKLNDAGLCAQSLKDAIGA >gi|257441660|gb|ACYG01000027.1| GENE 180 201960 - 202889 1079 309 aa, chain + ## HITS:1 COG:no KEGG:FN0976 NR:ns ## KEGG: FN0976 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 304 1 300 305 265 45.0 1e-69 MSVEFHVKNKKRPLFMGYSDAMSVGKALELLPDLSVFDIDESAEGFDERAFLKSPLSEQE CLILGVRGKSGRGMELRYDEERQSYAVRVNTPATVFDWVLAISYLQALSKQLQSEIADEN GEIYTPDSIEQFDYERDISAGLHSIDQHLSGDTEVNFCYGVERPFAINRAMMDEILASYN PSAEFSKRLTEVQYLGAYSARQRFYRNGDDGTIMGSYALTQDLPTILPYKPFVEWQNTEM LKNNDVARWQIALIGIDGDENDADNYHAIAELEYDEFIARLPKQNYRFIDASYILVGGLN AEQLKALAG >gi|257441660|gb|ACYG01000027.1| GENE 181 203227 - 204207 703 326 aa, chain - ## HITS:1 COG:no KEGG:Saut_1457 NR:ns ## KEGG: Saut_1457 # Name: not_defined # Def: putative galanin # Organism: S.autotrophica # Pathway: not_defined # 81 318 82 316 324 100 28.0 8e-20 MNINEAIVATAKKQKECRLAFVKYLFLGILFIIILPVGGGFAVGHLFENRLAPLFFIIIY IPFFLAALMANASRVIDELGDYKAFYKDVFVRAAIRSTDPNFSYDPNAGISRKEFRKIGI YSPDEFRAEDQISGIYKGVKFSLSEAINIPNGATLELSDSAALNLLSAIVFAWSTMKDMQ AFSGSVLVCEFYKKFSGQTIVASRTLNTRFLGEKEQMDDLFFSKEFRVFADDKVEARYLL TPAFMQRLRELKEKFAGKMGLSAAFMDDKLYLFLNGAKNKFETTLFSPPPSLEDAAGIKN EILELLRVIDELSLNPDLSRAAILAD >gi|257441660|gb|ACYG01000027.1| GENE 182 204350 - 204778 316 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460576|ref|ZP_05625677.1| ## NR: gi|257460576|ref|ZP_05625677.1| hypothetical protein CAMGR0001_1343 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1343 [Campylobacter gracilis RM3268] # 1 142 1 142 142 266 100.0 3e-70 MEYEITGEVRNLRVHAARGNSKIWVFFEIDGVKLRGEFNDIPVEEGELARAYFIRGGYAG SYVITRVWVARKPSPLRRKLGIATAVCTLGFGAALWIVGFGILNVGGRGSLINFICIAAA GFGVLKEGVGNLKMWLNQRTSR >gi|257441660|gb|ACYG01000027.1| GENE 183 205250 - 206032 894 260 aa, chain - ## HITS:1 COG:jhp1024 KEGG:ns NR:ns ## COG: jhp1024 COG0790 # Protein_GI_number: 15612089 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori J99 # 43 257 35 290 290 107 33.0 2e-23 MRKIIDIAALSIAVCILVIVLFWPSPVLSFKCYRGDGVSCAQLGRDKLSRGDYDGAKPAL AKACEAGEKDSCFDLGALYDGEGNATQAGVFYDAACDKNVAVACHKLGNLYQQGRLSRDF VAAARHYVKACDLGYAKSCHNAAVVYFTGGFGLAADQAKAVSFFERGCDGGLLDSCYNAG VAYDKGLGAPQDRDKAEKLYTKSCELGYGDACNNLGYLYVSKGDLRGFSKGLGWVKKGCD AGNKKSCQLYEFMKNEILKK >gi|257441660|gb|ACYG01000027.1| GENE 184 206242 - 207045 416 267 aa, chain - ## HITS:1 COG:jhp0220 KEGG:ns NR:ns ## COG: jhp0220 COG0790 # Protein_GI_number: 15611290 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori J99 # 31 250 90 314 355 130 35.0 2e-30 MRKTISIVALVIAVCVLIKILFPTPILSLKCHFDDNKSCVELGRDKQSRGDYESSRTIFA KACDLGDIDSCFEVGTLYDNGDKVDAIKASKFYLKACEKSKAVSCHKLGNLYQKGLLEKD YKKAVKFYEKACDLGYGKSCHNGGSVYIMGGFGLEVDHEKAFELFKKGCEHGLLDSCYNV AFSYQQGDGTQMNYDKAIEFYTKACDLGFSYACGNLGVLYVGGSQNVKQDLRKALDYFVR ACDLGNEKICEKLQWIKDTISIDQPQN >gi|257441660|gb|ACYG01000027.1| GENE 185 207186 - 208982 1725 598 aa, chain - ## HITS:1 COG:Cj1175c KEGG:ns NR:ns ## COG: Cj1175c COG0018 # Protein_GI_number: 15792499 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Campylobacter jejuni # 174 598 104 528 530 525 61.0 1e-149 MKNLVLNEIFKILSRKVVLEKPKDKSLAHYASPEAFALAKELRKAPKLIAEELAAKFKDS EILSATAVNGYLNFHLKPVVLGALAENALRLGGDFAKNDAELGRGILPASERICAGEPVC NGFAANLAASGNDAAKSQNSAARQNFISQNSEAASNSVAVPKCDEARNSAAASQKILLEY ISANPTGPLHIGHVRGAVYGDTFARIGGYLGHRVDTEYYINDAGNQIELLGTSIALRARE LAGEDVSYPEKYYRGEYIDEIIPLAHAQFGDEIFRDESRILQLAEFAKDEVLKIIQKDLA DAGIHIQNWASEKSLYGELEPTIRKLERSGKMYEQESKIWIRSSQLGDEKDRVVIREDAR PTYLAGDIVYHNNKFERGYERCINIWGADHHGYIARLKAAVHFLGYDESRLEIILMQMVN LLKDGQTYKMSKRAGNAILMSDVLAAIGRDAMRFIFISKKGETPLEFDVDELAREDSSNP IFYINYAHARVNQIFTKAGKREADVLGADFGTLDEAGLGLAFAALGLNEILNDAFNSRGL QKLPDFLKALAADFHKYYNENRVVGSENEDAKLKLFALVALSIRTAFALMGLSAKEKM >gi|257441660|gb|ACYG01000027.1| GENE 186 208988 - 209200 488 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460581|ref|ZP_05625682.1| ## NR: gi|257460581|ref|ZP_05625682.1| twin arginine-targeting protein translocase, TatA/E family [Campylobacter gracilis RM3268] twin arginine-targeting protein translocase, TatA/E family [Campylobacter gracilis RM3268] # 1 70 1 70 70 70 100.0 3e-11 MGVSVQQLLIILAIIVLLFGAKKIPELAKGVGKGIKTFKKEMEEDDEPQKVEKKMEQEIK DAEISDTKKA >gi|257441660|gb|ACYG01000027.1| GENE 187 209211 - 209810 500 199 aa, chain - ## HITS:1 COG:Cj1177c KEGG:ns NR:ns ## COG: Cj1177c COG0194 # Protein_GI_number: 15792501 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Campylobacter jejuni # 1 197 8 203 207 202 52.0 4e-52 MLVSGPSGSGKSTLIKRLITEFGEQIYFSISSTTREMRAGEADGVNYHFISESEFRAGIE RGEFLEWALVHGKYYGTSLKAATSELERGKIVIFDIDVQGYEIVRGKVPKNELTSVFITT PSLSELRDRLRARGDNDPADIALRLQNAQEEMERLGEYDYFIINDRLEAAYENLRSIYKT IKLETASRDIGKLIEIWKI >gi|257441660|gb|ACYG01000027.1| GENE 188 209825 - 211897 1568 690 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1250 NR:ns ## KEGG: CHAB381_1250 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 322 1 330 432 80 25.0 2e-13 MKILLDNHNEQVASVVNICCERIGADLVAYSADESEYDLTIKNYEDGDDISKFDLNKTLF LTPKNVSVPGARYTLTKPFSPLELITFISEFSVQNMSVQAKEKMAKEFADASSVMKEIDA IDQANSASGSNFEELVDSFYDSGKDIPLSQLANDIAPEIADDVPLSQLVGDMPRTDEIAD DIPLSQLADEAALADTIADDTPLNAVAEKIADNIADDMPLNLAASDIPEDVPLNSISTSE PAESNHTPQDEIPLAKDDAPIALAALDDENPKNSKTDKMQTEDEIPATRASETLPLVQQD ELQRASSSNGTAVEKKADAAPNLEEAKDFADVTLKQHESDGSFAYKTEERKSASQVVQDV AGAPVNSGFDMDFSRLFDSAGMPVEEFGGYDNFATAAFASDEKEDKKSAHDKNTAATDFQ KTQIPSQYEVASDMPIALAGAGDIPRENLYNAVPFQSMEFTGGLAQNTPMSAHNEAWNSI GANFAASANSSNTGIINSTPAPNFSELNLPHILDASDLPKQSEQANSVAGGFADGFLRAM EGDFANSFAESSADSEQFKSGKPAKSAAQQIKFNASKASERTEFKSPKFGVSEQVNEMKF GAQAMPNELAASAAAEFASLMASELELSSKSEPLRNEHSKKPSAEELKTKLRDDLEAGIA STIERFAGSKDAKDALKDFKINIDISFGDR >gi|257441660|gb|ACYG01000027.1| GENE 189 211955 - 212596 232 213 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 2 191 3 199 223 94 33 9e-18 MELLKGVNLTHAYDYSLFENVSLSVQESESIAILGVSGCGKSTLLHILCTLLKPNSGEVI YGGRSIYELSSDERLKIRRNDFGIIFQSHYLFKGFSSGENIELAAKLTNNAIDDEILKKL QIEHTLKQGVGELSGGQQQRVSIARILCKKPRIIFADEPTGNLDKDTANEVMDVIFDYIK SSRGALVLVTHDENLAQKCCKVYRLNNRNLAQI >gi|257441660|gb|ACYG01000027.1| GENE 190 212599 - 213663 415 354 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 2 354 3 280 283 164 31 5e-39 MEISAQMVKELRESTGAGMMDCKKALVETDGDMDKAVDLLREKGLGKAAKKADRLASEGL VSVEVGADHKIATISEINSETDFVAKNQNFINLVKNTTLHIQSKGISSIDELNSSIIDGV KFDEHLKSQIATIGENLVVRRFETIKAGANGVVNGYLHSNGRVGVIIAAACDSERTAEGA KDLIKNLCMHAAAMKPQVISYKELDPDFIEKEFLALKGEFEKENEEFVRLGKPLHKIPQF GSRAHISDEILAKEIEALKDELRKQNKPEKIWDKILPGQIDRFIADNTQIDQRLTLLGQF YVMDDKKTVEQVIDEEAKKLGGKIEIVKYVRFEVGEGLEKKSEDFAAEVAAQIG >gi|257441660|gb|ACYG01000027.1| GENE 191 213663 - 214460 1196 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|118474889|ref|YP_892581.1| 30S ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40] # 1 259 1 256 258 465 88 1e-129 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA EGKTILFVGTKKQAGATLKEYAEKCGMPYVSHRWLGGMLTNFSTIKQSIRKLEVIETMEE DGSINLLTKKEALMLRRKKEKLELYLGGIRNMKGLPDMIFVIDVVKEKIAVAEANRLKMP VIAPLDTNCDPDVVDFPIPGNDDAIRSVQLFCQEMAEAINEGKALRDQDASEDVEQSEAV SDEEKEEVVAEAMSEEDFDVNEDEE >gi|257441660|gb|ACYG01000027.1| GENE 192 214745 - 215884 1462 379 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0552 NR:ns ## KEGG: CCC13826_0552 # Name: iadA # Def: isoaspartyl dipeptidase (EC:3.4.19.5) # Organism: C.concisus # Pathway: not_defined # 1 379 1 379 379 603 78.0 1e-171 MLLLKNADLYAPEHVGRSDVLLGGGKILAVSKGLDFRVDGLEIYDLEGKILAPGLIDQHV HITGGGGEAGYHSRTPEITLSQIIRYGTTTVVGTLGTDGCTRSLENLYSKAKALEYEGIS TFIHTGSYALPSVTFTGSVTRDLVLIDKVIGCKIAMSDNRGSYPTSQELIKTLTQIRIGG MISKRGGVLHMHMGGLADKFDPIFSVIKDYSFPINYFSPTHCARTKELFDEAIKFQKMGG YIDITSGGSKFAPLHEAIAYGLANGLNLERLTMSSDGNGSVPRFDENGALVGYGCASCET NLEVLQACVKNKILTIPQALSMMGKNVAKYLNLGGKGEIKVGFDADFAVFDEALNLDSVI AKGEFCVKEGKLVKKGFFE >gi|257441660|gb|ACYG01000027.1| GENE 193 216072 - 216806 624 244 aa, chain - ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 18 238 9 240 246 175 44.0 7e-44 MDKIEICRENLEFVLDRRGVLAGFSTRLGGVSGGAYASLNLGDHVGDDPQSVAQNREILA AALGIAPRNLKFMRQIHSNRVEILRADSDEIPPCDGLITDLRGVALCVLVADCSPVLIAD ERRGVVAAVHAGRAGVSQRICTNAINLMSERFGCVAAEMKVFVGANIKARNYELGELDLG EFERYKTQGHFDLNAALRDELAAAGVRNVKFDPRCTFESERHFSYRRDGVTGRFCGFVMN KLCR >gi|257441660|gb|ACYG01000027.1| GENE 194 216817 - 217671 962 284 aa, chain - ## HITS:1 COG:Cj1218c KEGG:ns NR:ns ## COG: Cj1218c COG0307 # Protein_GI_number: 15792542 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Campylobacter jejuni # 1 284 1 203 203 208 41.0 7e-54 MFNGLIREIAQVASFSGDLLRLRAKYRPALGDSVAVNGACLSVTRLFADGFAVQLSSETA RVIAVQNLRGSVHIEPAMRIGDRIDGHLIQGHVDAVGEIYKISKLASGVDFFIRAPLHIA PLLAPKGSVAIDGVSLTINEVLEGSGTPGRNFNSQGLDGGNFTRKEPRGANSNGASSHGP NSSGSNSVRDLNSSDANLKSGAQSCAIRLTIIPLTLKDTLFGSYKIGRRVNIETDLLARY VAAQLGFACGQPVGRGTVAARDESAKGEKEGLSWDAVDKILSLY >gi|257441660|gb|ACYG01000027.1| GENE 195 217773 - 218093 456 106 aa, chain - ## HITS:1 COG:Cj1153 KEGG:ns NR:ns ## COG: Cj1153 COG2863 # Protein_GI_number: 15792477 # Func_class: C Energy production and conversion # Function: Cytochrome c553 # Organism: Campylobacter jejuni # 1 106 1 100 100 68 44.0 3e-12 MKKVLIACAALAAFSSSVFAADGATLYKKCVACHGANAEKPYLGGKVPALNTLSKEDIIA SLKGYKDGTLGEGKGKFGMMGVMKGQAASLNDESIEALADFIVSKK >gi|257441660|gb|ACYG01000027.1| GENE 196 218373 - 219926 195 517 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 318 511 133 340 398 79 31 2e-13 MKKYTKQILAMLALNAIYSGSGILILSFINKYLLGEGERGGRIIALFFGLLAIFLLLSVL SRIMLCKMENDFVFDLRTKIIKQIIDTKFERIEAASKANLLASLSSDISRLTEGFMRISE LIQGAMIVLFCGIYVLYIAPMMFAFLFVWIGALMIFNRFLMKKVMQNYDLYRQNEDVLYK NYAAAIEGHKELSLSLAKAKSLYENDFLPNAQNLRQSSLRAEVYGAFASNFMNVMMLGAV GFVLYFGLSGGKADLANAVTIALTVLFLRAPLMMLIFSLPSVLRAKIAYAKINELGLDPF VQGFELAQMQPWRSLELKDVGFSYPDGKFGIKGVNLQLNAGETVFLVGENGSGKSTLFMI LAGLYTPQAGEILADGAALKPSDLRAYSNNISAVFSDFYLFDYATGDADIAREWLALTHL QDKVGLNEAKFSTTSLSSGQRKRLALVSVLMDGRKFLMLDEFAADLDPQFRAEFYERILP ELKSRGYTIFAISHDDKYFGAADKIYKMQRGEISRIK >gi|257441660|gb|ACYG01000027.1| GENE 197 220635 - 221912 1096 425 aa, chain - ## HITS:1 COG:Cj1262 KEGG:ns NR:ns ## COG: Cj1262 COG0642 # Protein_GI_number: 15792586 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Campylobacter jejuni # 138 422 126 406 411 143 33.0 6e-34 MRNISIIKLISFFFFAALITVNLAFFIESKRQVRDAEYLTYERFMLGMRIRGQVEGNAAK QLAQIGLKNSELDPIKIRQGGEKIFSDSYTDMIRYNKKFYFVPRFSSIDPKMFSRIMDAA GLNISNKDDIAKNDVPLENLEEISSNGIWILWLVVNIVMVAFFIAVLKKLLRLRNLKNMI RRAGEEDKFRLIKVEANDEIGQIAGEFNTTMQKIDAIKQARALFLRNILHEFRNPIMKGR IMADMIAEILQDDKFKSRLKQIFIRLEIILGEVVKVEKLVSNEWELKKNKHRVIDIIDHS VDMLLIKDTSRIEVRADGEISAVKVDFELYATGVKNLIDNALKYSSGKVLVNIDKNAVCI SSMGDELEPERLDFDRAFNRKIETSSSGLGLGLYIANQIFKKHGHTLKYKHEDGKNNFLI CFINA >gi|257441660|gb|ACYG01000027.1| GENE 198 221905 - 222576 557 223 aa, chain - ## HITS:1 COG:Cj1227c KEGG:ns NR:ns ## COG: Cj1227c COG0745 # Protein_GI_number: 15792551 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Campylobacter jejuni # 1 220 1 222 224 186 47.0 4e-47 MIEILLIEDDLELAELLKFALAKSEIGVTIVTNPLEGLKILNEKNTFDALVLDLGLPNMD GLEVCKHVRHSYPSLPIIISSARSETLDKIKGFELGADDYMAKPYEPIELAFRLKAILRR GIQNSNDSKTFCVDKQRRIVIKNKEEIALTKVEFDIFIYLYEKEGMVIPREDILISLGQA KFQSGLKSIDVAIGRLRQKIGDDPKNPRFIHPVRGIGYKFINA >gi|257441660|gb|ACYG01000027.1| GENE 199 222488 - 224152 1558 554 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_2207 NR:ns ## KEGG: CCV52592_2207 # Name: not_defined # Def: metalloid reductase RarA # Organism: C.curvus # Pathway: not_defined # 92 553 5 457 458 295 40.0 3e-78 MVTPISLFANANFKSSASSRSSSISKISIIAIIIPNLKFKTKKYFSDNVTKILPFLTGLR VMISLINPRRYPKRNLKEFMVKTRFLTTNKSKFALSLATLMAMATCASASDSLAEALQAS TMGATVFSYYDMDSTEYFPPASRTNRIREHIGGLGAELRFLTGSYYGFKLGLTAQGLVNF GPSKAAKDYFAYDWNGEGIALSEAYLGYENEYIDFKIGRQYYNSKYTGLVPPLVATNTDV GYKEAFEGVSARIKLDSIDTIIGLADFWKFAGRSSAVTGGDHGAPRFKDRVVIGGFGPYG YEFDNIFNSFVEYRGPQGLNFTVAYANVSGLEYDDALNSKGDINFYHAAVGYKSPVLFEN ANVGAIFMYKGSRTNGSLKENFDFNGNFYVGMVGLYNAYGFDLAYAYSTVSKNQMALQGV GNDCGAPTATPIYGPFLFMNFAGMNLHKFSAGYDFSNVGAEGLRLDADYWYGKQHNGSNV RSGGLHGQAPGTRIDVEGWDVQVSYKVPAVKGLKLSAIYETMDRKLKYTNGSSDGKTTDE ELWLRASYDFDILK >gi|257441660|gb|ACYG01000027.1| GENE 200 224175 - 225938 1323 587 aa, chain + ## HITS:1 COG:Cgl2564 KEGG:ns NR:ns ## COG: Cgl2564 COG1053 # Protein_GI_number: 19553814 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 277 582 3 305 320 64 24.0 7e-10 MAENNELSRRSFLKRSGALTLGSVAAGSALLTGCDNPNNHLIHPKKEVAKAPEVPKWLGV EPEISDKDIKETLETDVLIIGAGVSGLHAARAASEKGAKVIVIEKAGRFQVRSGQYGTLG NKFQRELGIKYDKQAAINEHLKQMGYRADQRVWNYWADHSGEDFDWMLELAPAVHFMRET DTQLDRSKINLMLMHYPLPAAYDPSQENSPSYPTVMTFLPSQEPMMELVYEKSIKQGAKY IFKTRAQKLLRDKTTGKMQGAIAQDMADGSYIKINAKSVILATGDYMNDHEMVKTFVPWV ANFFCPFPNKDYKNNPTNTGDGHKLGSWIGAKLEDGPHAPVAHTLGGPLGVDAFLLTNAK GERFTNEDLSGQQVTQPLSRQPGGFGWQVFDSKFPEQVGLMGVSHGSVNHCVAPEDNPKL PPDCQWAIGKTSYISVKDLEETPGVFKANSIEELAGMLYPDNKKAQTQFLATIKRYNELC DKGHDDDFGKTAKRMFPVRHAPFYAGKMGVGASLVVMGGFTVEPSTANVLDTDYNEISGL YACGNVMGGRFLGDYPVVLAGTSHGTCLCYGRLAGYQAAANAKGERA >gi|257441660|gb|ACYG01000027.1| GENE 201 225935 - 226462 624 175 aa, chain + ## HITS:1 COG:no KEGG:Slip_1675 NR:ns ## KEGG: Slip_1675 # Name: not_defined # Def: NapC/NirT cytochrome c domain protein # Organism: S.lipocalidus # Pathway: not_defined # 1 167 15 177 179 110 36.0 3e-23 MNKKRKYTIIGLVIAAIVGFISFHQVQAASHKAEFCIMCHNMQPEYDSYTKGNLLAKKHN DANVTCHDCHTPTIGEQLNEVRMYVTGDFETPTKQRGFTNEQCTSCHKIADIRKKTAHYG LSNPHEGTHNKGNEMLQCQSCHAVHHPQKLNTCMSCHPIDWKVDSSWKMYPPSEK >gi|257441660|gb|ACYG01000027.1| GENE 202 226579 - 226743 114 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLQFEPKLCFDNYANSKFRFIVKNYSKMLFYIQYVAETFFLHFPVQNDFSNSIS >gi|257441660|gb|ACYG01000027.1| GENE 203 226817 - 228709 2327 630 aa, chain - ## HITS:1 COG:Cj1188c KEGG:ns NR:ns ## COG: Cj1188c COG0445 # Protein_GI_number: 15792512 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Campylobacter jejuni # 3 618 2 613 619 801 64.0 0 MKYDVIVVGGGHAGIEASLAAAKMGAKTLLITILAEQIGAASCNPAIGGLAKGHLVKEID ALGGQMGLAADACGLQFRILNESKGPAVRGSRAQIDMDEYRIYMRNLLLNTQGLDISQEI ASEILTCEQGGEQRVCGVKSHLGNVYETERLIITAGTFLNGLIHVGENKLQAGRVGELAS VELAESLRSLGLQMGRLKTGTCPRIDAKTIDFSVLERQDGDADPRPFSFRSKDFAPKQLA CFIAYTNERTHEIIRENFTRAPMFTGQISSTGPRYCPSIETKIYEFPNRDRHHVFVEPQT REATEYYVNGLSTSLPYDVQIAFLRTIRGFENAKIVRPGYAIEYDFIDPTELKHSLETKK IRGLFLAGQINGTTGYEEAAAQGLMAGINAVLDLRGRQPLILRRDEAYIGVLIDDLVTKG TNEPYRMFTSRAEFRLLLREGNAVLRLSEYGREIGLLDEASYERASKFKHDVQSGMEFLL KTQITPSKQTLSLLQSIGAEPISQSCSLQKIASQSGFSKAGLLALVPHFKGFSDEVLDEI LTQCKYHFYIAMQRAEVERMKGLLDVAIPPQIDFSKIGGLSNEIVQKLNRFAPPTLFAAS EISGVTPAAIDILHIYIKQNFGDKLGIKRE >gi|257441660|gb|ACYG01000027.1| GENE 204 229042 - 230031 924 329 aa, chain + ## HITS:1 COG:FN1000 KEGG:ns NR:ns ## COG: FN1000 COG0502 # Protein_GI_number: 19704335 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Fusobacterium nucleatum # 4 324 33 360 360 369 57.0 1e-102 MIDKFYISELKDRVIGGCEIAKQQALNLARCEDLDALFAAADEIRREFCGDKFNLCTIIN VKSGRCSEDCKYCAQSAHFDTGCETYGILGEQQVLSAALANEAEQTHRFSLVASGRGISQ KSSDLVAYCAIYERLRSKTQLHLCASLGIASKPALALLKASGVQTYHHNLETSRKFYPQI CTTHSYDDRIQTIENCRAVGLDVCSGGIFGLGENMEDRIDMALQLRELGISSVPINILTP IKGTPLQNAAPLAHDEILKSIAIYRFILPRAYLRFAGGRRNLGEHVRTALGCGINSALTG NFLTTTGDSIASDKALVAQCGFDLAKGAD >gi|257441660|gb|ACYG01000027.1| GENE 205 230071 - 230496 359 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460601|ref|ZP_05625702.1| ## NR: gi|257460601|ref|ZP_05625702.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 141 1 141 141 181 100.0 2e-44 MKLKFFLALILVVLLGGCSLLSQGDEEASLVADASRCDVANSLSKEQPNRCAKWQKTDAK VAQTAQKQAVSQDTLNSFRADSAQAQQRAQERYIATQRSLMQHQAQQQMRQMQQRQNMRN LQNEQNWNRLRNLENISSGGI >gi|257441660|gb|ACYG01000027.1| GENE 206 231376 - 231573 139 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460605|ref|ZP_05625706.1| ## NR: gi|257460605|ref|ZP_05625706.1| hypothetical protein CAMGR0001_1373 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1373 [Campylobacter gracilis RM3268] # 1 65 1 65 65 120 100.0 3e-26 MNEDFQRAKLQGTLGALCLLVASIAYSIKGEITYLDSQILVWIFAFTFLYHALKNIQNTR VRRFL >gi|257441660|gb|ACYG01000027.1| GENE 207 231726 - 231965 66 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460606|ref|ZP_05625707.1| ## NR: gi|257460606|ref|ZP_05625707.1| hypothetical protein CAMGR0001_1374 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1374 [Campylobacter gracilis RM3268] # 1 79 19 97 97 118 98.0 2e-25 MRAATGCKLFAVYAALLIVDVAADIIYGMLQVLAPPLITPSVVKYMALANLLFEPLAPAV LLLAWPSMKSSASSQDLWH >gi|257441660|gb|ACYG01000027.1| GENE 208 232602 - 234752 2556 716 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1393 NR:ns ## KEGG: CCV52592_1393 # Name: not_defined # Def: putative high-molecular-weight surface-exposed protein # Organism: C.curvus # Pathway: not_defined # 24 716 20 714 728 266 31.0 3e-69 MHSKTIGASLSLALTGQLYAIPVANPLTIDKTTDLNNYDVYEKDVDDGTLTVKNPTVAQI ITLDSQPSDNSPLNNIIVNSATAADQTLKGNALTMNGGTLNSINVASSQQDGTVFSENTL NLNGGELRKTHLVESNGRATATKNVLNLNGTMIYHGLSVVDINGGAANENTLNINGTKGE RLTTTFTAAYLGNSGTADGNVLNINGGTIGDSLSAMRAAFAWGNSKLTNNVVNLKDADDL RGRIDVANIMWAHDGAEARDNVLNVYVRDKDWSRLDLCVAFGRENQKLSGNTFNVYGKND TFKSIAGFEKLNFYLAADTANDETILNLVSGELTDISKATIGVGIANGADKLKSGDRVNL IKTASGIKFGDMANRSEQLVQSGLSTAYTFALRSANDDKDLIADVTKITINPDPQPLPNS DRIGAKLMAQNKNTLETGAAVLGAINQSDDILSGITDTADGTFAYAGGFNMRYNSGSYVE NKGISVLAGAMGRIGDGASLGGYVETGGGKYESFNDFAVKGSGDLKYAGAGIVSEFDLAE NFYAKSGAKIGRIKSDYEASLASGRAEYDVTRTYYGANLALGKIFELSANLNADVYVKGF YTHIDSKKTEVLGEGIKLEGIDSVRSRVGARFNFDVSDNVELFAGAAFEREFKGKIGGYN STYAMDIDAASVKGNTAIGEIGAKYSSGKLDTSLKLEGLSGKKEGINAGLRFVYKF >gi|257441660|gb|ACYG01000027.1| GENE 209 235252 - 235422 119 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460611|ref|ZP_05625712.1| ## NR: gi|257460611|ref|ZP_05625712.1| phosphoribosylformylglycinamidine cyclo-ligase [Campylobacter gracilis RM3268] phosphoribosylformylglycinamidine cyclo-ligase [Campylobacter gracilis RM3268] # 1 56 1 56 56 102 100.0 1e-20 MSDDLAHVLADILGIEPLQFNVRKSPLRDEFDASRRRMTNGVDYDENLKGRGGYGR >gi|257441660|gb|ACYG01000027.1| GENE 210 235446 - 235865 169 139 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_2111 NR:ns ## KEGG: CCC13826_2111 # Name: not_defined # Def: phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) # Organism: C.concisus # Pathway: not_defined # 6 85 372 451 571 87 50.0 2e-16 MRVAHDGALLPIIKEAKKSQRERNFYVVHLMGNHMDYKKRYPEEFDKFKSDDIALPFTQK QKVALACCDNSVLYNDYVVNEIHRMRTASSSISAIMERISMSKTASSGTTSIPDSPTKFR CFSSLQKALSPIMRSFGGA >gi|257441660|gb|ACYG01000027.1| GENE 211 235867 - 236199 175 110 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_2111 NR:ns ## KEGG: CCC13826_2111 # Name: not_defined # Def: phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) # Organism: C.concisus # Pathway: not_defined # 1 98 257 352 571 91 45.0 1e-17 MSLYGYGKDTTPLLNDLQRRGLLIKFSDTVSCYGATNPALMRILNFSDYESERERPWFES LSIIDMFALSGFRTMWISNQEAFSKFALSAKSAADRAEKKHLSFHKRSAR >gi|257441660|gb|ACYG01000027.1| GENE 212 236209 - 236478 70 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460614|ref|ZP_05625715.1| ## NR: gi|257460614|ref|ZP_05625715.1| phosphoribosylformylglycinamidine cyclo-ligase [Campylobacter gracilis RM3268] phosphoribosylformylglycinamidine cyclo-ligase [Campylobacter gracilis RM3268] # 7 89 1 83 83 154 98.0 2e-36 MIYTICVVIFCIFTATKIASGGERYRATLGTYAPLEFAFVVKDYLGDANFLADLQSIDRG YDEAKRANFALDFNATQIKNVVLIIGESL >gi|257441660|gb|ACYG01000027.1| GENE 213 236480 - 236998 476 172 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460615|ref|ZP_05625716.1| ## NR: gi|257460615|ref|ZP_05625716.1| hypothetical protein CAMGR0001_1383 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1383 [Campylobacter gracilis RM3268] # 1 172 1 172 172 258 100.0 8e-68 MVQLLLDKARALLAPAPKFYFGLCGAVGVFWLVVALNLIVCAARAYYFYGVEDRIFSRIF EDFCCILIINLLIFHLCFVVFRRFFGLAALFALAINALCAAISLFLVIFFDSAFNVVALD AIIHTDVNESKEFAAQFLSAGVICSLLAFATATFVALKFKKKLVQREAASRI >gi|257441660|gb|ACYG01000027.1| GENE 214 237666 - 238118 439 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460618|ref|ZP_05625719.1| ## NR: gi|257460618|ref|ZP_05625719.1| hypothetical protein CAMGR0001_1386 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1386 [Campylobacter gracilis RM3268] # 1 150 1 150 150 272 100.0 7e-72 MELFKALFKIYFARILAFMDACARAWQRFYEPIRLRKEKKRLRAKGYFTEDATWAEFFAD FKFCKCFIIKKILYPNFYAIKNSSKWEAGSKRASFTVGSFAYDEIAWVWVPRAFDGGRKN DLAKLKDLLQKIPALRYEQSDTGIKIFGYE >gi|257441660|gb|ACYG01000027.1| GENE 215 238119 - 238778 916 219 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1372 NR:ns ## KEGG: CHAB381_1372 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 3 218 24 237 238 230 64.0 3e-59 MFFKMRKSSEQASKPQIATDITRLKSIGELSVFKIYSKEIVTRKQNVGSGLLGSLVSPLM TKKQIAIIFEFEIEFVYDLLSPEFAILPQGEDRYEIKMPPCKYKYSIKDMKIYDEKNAKL LPFLLPDSLNGLFGASFDESDKNHLIDDAKDEVKQLSLKIINDLGGKIHKSATDTLEAIA KSFGAKEVGFIFQDKALQSIDINSNEIAIDKSLKSQIEK >gi|257441660|gb|ACYG01000027.1| GENE 216 239791 - 241002 1794 403 aa, chain - ## HITS:1 COG:Cj0828c KEGG:ns NR:ns ## COG: Cj0828c COG1171 # Protein_GI_number: 15792166 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Campylobacter jejuni # 1 401 1 401 403 514 69.0 1e-145 MVDLNKIIQAKRTINDFVYKTPFALAPKLSKLYGAEVYLKSENLQRTGAYKIRGAYNKIA HLTDEERAHGVIAASAGNHAQGVAMSAQKFGVHAVIVMPEATPLLKVSGTKALGAEIILK GDNFDEAYAFALEYAKEHNLTFVHPFNDEFVQAGQGTIALEMIEEVADLEYIVVPVGGGG LATGVCSCAKQINPDIKIIAVAAKGAPAMHDSFVAKKPLNSKSVRTIADGIAVRDTSEIT LSTIIECVDEFVQVDDEEIASAILYLLEQQKIIVEGAGAAGVAALMNAKFAFPAGAKIGI ILSGGNIDVQMLNIIIEKGLIKSHRKMTINVTLVDKPGALTGLTEILRRANANIVKIDYD RFSTNIEYGDAQITITLETKGKAHQEDIAWALKNAGYDFREIL >gi|257441660|gb|ACYG01000027.1| GENE 217 241103 - 242662 1551 519 aa, chain - ## HITS:1 COG:Cj0831c KEGG:ns NR:ns ## COG: Cj0831c COG2265 # Protein_GI_number: 15792169 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Campylobacter jejuni # 365 517 204 356 357 189 60.0 1e-47 MNCESFGSCGSCTLGEPYEDQILYKKQLIGDKFREFFDGEFEFFASQPQNYRIRAEFGIW HDIWHSAFDLAYTMGGARSKKILINECPKVALPIANLMPRLLEVLRRSEALKEKLFGVEF ISCASGILATLLYHKRLGEREQEAICELAGKLGIRVMARARGQKLLSGELSLTDELCVDE RVYKFRFGENAFIQPNRGVNEKMIAWARSCVDFGKEGMGVVCAAQNFAVKNSIAENSVAQ NSSHEQSDAQNSTDRNSASENSAEFDAACRNFVKANSACIEFNGENFVKFNYASADESSA DKNSARKDLDVRNSASQNLDCEKRCVQNSACEKLIAQNSSCEQSAPQNSSCEKHSVRPEN SAARDLLELYCGHGNFTIPLAAKFNRVLASEISKSSIANARINCELNGVCNAQFVRLSAD ELMSAFARRREFERLKGIDIFGYDFSHVLIDPPRAGLEPSVIDFIKNFENLIYISCNPQT LFENLRSLCATHEVRRFAIFDQFAHTAHIECGVLLKRRS >gi|257441660|gb|ACYG01000027.1| GENE 218 242659 - 244359 1953 566 aa, chain - ## HITS:1 COG:Cj0832c KEGG:ns NR:ns ## COG: Cj0832c COG1757 # Protein_GI_number: 15792170 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Campylobacter jejuni # 8 564 5 576 577 581 56.0 1e-165 MLKNLLIFTAIFLPALALADVEPAVRNSELYGVLTLIPPVAAIVLAFITKDVILSLFLGV LSGTFLIGMVDQNIAASALFAFTDLCSRMVKSMADTWNAGILLQVMCIGGLIALVTKSGG TKALALWLSKHADTPVLGQIYTWLMGIVIFFDDYANALIVGPIMRPLMDKFKISRAKFAF IIDATAAPITGIAVISTWVGVEISAIKEAYSQIGVENINAFTVFVETIPYRFYNIFMIFF VVATAVMSREFGSMYRAEIASRGGKSGAADFKIKNLEDQIFVPKEGVVLRKINAIIPLGA MIVLSVIGFYLNGYSSLEGEALEAVKAAPLSFTSIRTAFSAADASVVLFQSALFSSIIAV VLGIAQKIYGVKEAIEVWVGGWKSMLNTVIILLFAWSLSSVIKELGTSRYLVELLSDATP RFALAIVIFVLSSFISFSTGTSFGTMGIVTPLAVPLAHAVGQKYGLSGEEFHVFMCVNIS AVLTGAIFGDHCSPISDTTILSSMGAGCDHIEHVSTQMTYALVVCGISIVCGYLPAGFGL SVWGCLILGIAAIILLLRVVGKRVDV >gi|257441660|gb|ACYG01000027.1| GENE 219 245044 - 246294 1363 416 aa, chain - ## HITS:1 COG:Cj0834c KEGG:ns NR:ns ## COG: Cj0834c COG0666 # Protein_GI_number: 15792172 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Campylobacter jejuni # 9 399 2 403 412 141 28.0 3e-33 MQFEVAMRKILMGSFVFCGTLFGASCEQILSDPRGFFSKEPADEELLQSDFGCQGSLAGA EFLQNLKSAASEIRDENIDCVGNEALLNEKRLERTLAFAGMDGEGFLSYAKEKNYAQISE KSLEALEFYSERKIGNFIAYGNFMGEIPAAREALRDYFAAKFNKNDADELASVVIAEFIA YAAKDRKAGDYGELEMALKGGVGADEFRTLLFSKDFAIYELDNALDLALLLGYDERFSGA LIERGAQVNAGEENSLFYAMNNVQSAKFMISKGALVGYKNSLGQTPIFFAAAAKNYELVK LLIYSHASVNVRQIGSAEAQALASLGERSDGCERSGAGKTLLMFAAQTSTKQIVELLVKS GANEKAVDEAGLNALDYALAGGEAATQSYLRSLGLSPTQASDDFTSDPQDAPEREN >gi|257441660|gb|ACYG01000027.1| GENE 220 246758 - 248935 2422 725 aa, chain - ## HITS:1 COG:Cj1161c KEGG:ns NR:ns ## COG: Cj1161c COG2217 # Protein_GI_number: 15792485 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Campylobacter jejuni # 4 721 3 697 699 473 41.0 1e-133 MSSKITLNIVGMSCVNCSNAIERVSRKIEGVQEAHVNFANGSGEFVLADPALEETLKAKI KKLGYDIAVDYEDLERKKRSNLKAALFRLILALVLAAAVMAVEMSGFLSFVPKALLCAAM ACVSLFYCGKNFFYHAYGSLKNRSFDMNVLVAMGSFFAFAYSLTAAAWVYTHGAQNEFTN LYFSSASMIIAFISLGKYLEERSKMKANDYIKGLIDLSPKTALLIKDDGTIAEVRAEALK PGDKVLVKNGSRIPCDGLIVEGGAQIDASLISGESLAVYKSVGDEVNAGCVSTDGVIYVK VTKFPHQTLLAEIKNLLNEAGNKKMPIARFADKISNIFVPAVILIALVSFIAWMALDGRL SYAASAAICVLIISCPCALGLATPIAIVCAISNAAKAGILIKNPEILEILKDADVAVFDK TGTLSKGEISVSFSDLSAQDLYALASAQKLSEHPISKAIVKFAELKFGEISKFNGEFESV AGKGIVAKNPTGEILCGSAGFLHERGVDTGVEVEAEELLDKGFGVVYCAIGGSYAGFIAF SDEIRAEARDVVQALQKSGVKTVMLTGDNAKTANFVARNLGIDEVRSGVLPSGKYEFIKS LTDEGKRVLFVGDGVNDAPSLKAASIGIAMNGGSDVAKGAGDAIFIKNDLTGVLYLFRLS GAAMRTIKQNLFWALFYNAVCIPIAAGALYPALGVLLKPMYGAAAMCFSSVTVVLNSIRL KFAKF >gi|257441660|gb|ACYG01000027.1| GENE 221 248947 - 249162 364 71 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1516 NR:ns ## KEGG: CCC13826_1516 # Name: not_defined # Def: asparagine synthase, glutamine-hydrolyzing (EC:6.3.5.4) # Organism: C.concisus # Pathway: not_defined # 9 70 4 67 67 63 56.0 4e-09 MALKQSVKFKAQNIHCENCARTIKNALKDDFGEIEVDVASGVVSLSLDPRDEAKFKEEMD DLGFSVAEKLA >gi|257441660|gb|ACYG01000027.1| GENE 222 249295 - 250029 882 244 aa, chain + ## HITS:1 COG:Cj1172c KEGG:ns NR:ns ## COG: Cj1172c COG0217 # Protein_GI_number: 15792496 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 1 243 1 234 235 261 66.0 9e-70 MGRAFEYRRASKEARWGKMSKLFPKLGKAITMAAKEGGEDPLMNSKLRAAIATAKAQNMP KDNIDAAIKRASGKDSADIKTIFYDGKAPHGALLIIECATDNPTRTVANVKSILNKAKGE FLPSGSLKFMFSHKAVFETKLPSRDIEELELELIDFGLSELEINEFENDKGELEKTLLIY GEYESFGTLNEGIEKIGLEIISASLKFVANEKHEFSEEQLSDIDALLERLEDDDDVQAVY TNIA >gi|257441660|gb|ACYG01000027.1| GENE 223 250038 - 250526 589 162 aa, chain + ## HITS:1 COG:Cj1171c KEGG:ns NR:ns ## COG: Cj1171c COG0652 # Protein_GI_number: 15792495 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Campylobacter jejuni # 6 158 2 156 160 238 73.0 4e-63 MESLKIYDIDAAALARDKYAVIKTEKGDMKLELFGDEAPQTVTNFASLARSGFYKGLNFH RVIPNFVIQGGCPRGTGTGGPGWRIKCECDRQKHKHVRGALSMAHAGRDTGGSQFFVCHS AQSHLDGVHTVFGQIVDQPSLAVLDAIRQGDKIIDIEIKESL >gi|257441660|gb|ACYG01000027.1| GENE 224 250561 - 250926 262 121 aa, chain + ## HITS:1 COG:Cj1409 KEGG:ns NR:ns ## COG: Cj1409 COG0736 # Protein_GI_number: 15792727 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Campylobacter jejuni # 2 115 1 114 115 87 43.0 8e-18 MIKIGTDITAVRRISALRTKYGAKFLKRILKKSERSSALRDESIAGIYAAKEALSKALGT GIGAEFGFKDAKIYKDALGAPHLKIRKKIRKKFHIKSASLSITHDANVAIAVVALDIKLT K >gi|257441660|gb|ACYG01000027.1| GENE 225 251045 - 251938 557 297 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460640|ref|ZP_05625741.1| ## NR: gi|257460640|ref|ZP_05625741.1| hypothetical protein CAMGR0001_1408 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1408 [Campylobacter gracilis RM3268] # 1 297 33 329 329 574 100.0 1e-162 MPINMGLNYAGVCTNPLHFGILSDNELKEIAFKQYLKNEHAKSNYPFYEIFLRDSRPKDL DFDIDWWEIYRKCNGDKRPDDKCEFWKVSKELNLENLLSIGRQICKDGKQVTQIDKSILK AIDDEDVVYPWEDNKLFNDKGELNYSVYYKRKYHDEKTHQESDWILKFFQYNSIAVFKSD KNFTASDKIRGESDKIVYIIKYSGTTGSLMAMLKNRNFDSFCEDIDSIETGKRDLNKLTY RGTTLLEDNTTKTWTSNNYGEIRIRVDNCGNGLETLYHGPWDYFEEYMKLNKIKFKE >gi|257441660|gb|ACYG01000027.1| GENE 226 252428 - 253771 1682 447 aa, chain - ## HITS:1 COG:Cj0716 KEGG:ns NR:ns ## COG: Cj0716 COG3200 # Protein_GI_number: 15792065 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Campylobacter jejuni # 3 445 2 443 446 665 69.0 0 MSWSRTSWKDYKILQQPIYQDESAVQAAKERLYKLPPLIFAGEVRNLKAELARASEGKSF LLQGGDCAESFNDFSANNIRDMFKVMLQMAIILTFAAGRPVVKVGRIAGQFAKPRSSDFE EVGGVSLPSYRGDIINGFEFNEAARKPDPARMIEAYHQSASTLNLLRAFSRGGLANLHEV HKWNLGFLKRGELEAKFNELSDEISRTLKFMEACGLSAANSPSLAETVLYTSHEALLLHY EECLTRIDSTSGDWYDCSAHMLWIGERTRGADDAHVHFLSGIKNPLGVKIGPSGTADEIL RLCDKLNPQNEAGRLNVIIRMGADKIGARLPQILRELKREGRAILYSIDPMHGNTVKAAN GYKTREFSKILSEVQSFFEIHAAEGTHAGGIHLEMTGQNVTECTGGSFNVTQETLKQRYE TQCDPRLNADQALELAFLLADNLKKAE >gi|257441660|gb|ACYG01000027.1| GENE 227 253876 - 254748 1047 290 aa, chain + ## HITS:1 COG:VC0195 KEGG:ns NR:ns ## COG: VC0195 COG2962 # Protein_GI_number: 15640225 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Vibrio cholerae # 2 286 7 293 302 207 42.0 1e-53 MEENRTKGLMLAFATFFMWGVFPIFFKLIKDVDAVQILAHRVVWSFLLLLVFLCFTHRLK NVARLLSTPKIALTLLCTGLLISTNWGIYIYAVNSDQILATSLGYFINPLFSVLLGALFL RERLSTAAKLSLLLAFAAIGVQIYALGRLPIISLVLPLSFAFYGLIRKKVKVPSFEGLFC ETTLMLLPALAFLIYCALKGNGAFGFSASGALLFASGLITILPLLTFAVSTQYLPLSTIG FMQYISPSMSMLIAVFIYGEELETYKILSFSLIWFGLAVVGLDGLRRKNG >gi|257441660|gb|ACYG01000027.1| GENE 228 254741 - 255151 572 136 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0850 NR:ns ## KEGG: CHAB381_0850 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 136 1 142 142 97 39.0 2e-19 MANFALMFAVALAVGALVYFQVQKASARADAADPELSSQRYMKFCDILEDKLRDLKRLEL HDEGARESYLDELEALSKELVYIKTMHQSNLNPAVWEGKLFEFLNKTDALIEKYAAGAER SLQYWRKQLEMEFKNL >gi|257441660|gb|ACYG01000027.1| GENE 229 255888 - 256277 387 129 aa, chain - ## HITS:1 COG:Cj1386 KEGG:ns NR:ns ## COG: Cj1386 COG0666 # Protein_GI_number: 15792709 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Campylobacter jejuni # 1 123 34 155 156 141 58.0 2e-34 MIKAGLSVNLKSAKGDTLLMLASYNNALKTVNMLLSNGARVDERNDRGQTPLAGAAFKGH LEVVEALVDAGADVEATSGLGMTPYAFAIMFGRSETAKFLLSKRKKQGLLQKLAVKFLGI FTKKSARAV >gi|257441660|gb|ACYG01000027.1| GENE 230 256373 - 257809 1557 478 aa, chain - ## HITS:1 COG:Cj1385 KEGG:ns NR:ns ## COG: Cj1385 COG0753 # Protein_GI_number: 15792708 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Campylobacter jejuni # 1 475 1 473 474 678 72.0 0 MKKLTTTSGNPIADNQNSLTAGSRGGIMLQDYQLLEKLAHQNRERIPERAVHAKGSAAYG TLEITQDISQYTKAKVLQKGEKTKLLLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWD LVGNNTPVFFVKDPYKFPDFIHTQKRDPRTHLRSNEAAWDFWSLSPESMHQVTILMSDRG IPASYRHMHGFGSHTYSLINDKNERFWVKFHFKTRQGIKNLTNAQASQIIAKDRESNQRD LFESIEKGDFPSWDFKIQIMTLQQAKEVKFNPFDLTKTWPHKEFPLIDVGVMTLNENPKN YFNEVEQAAFSPSNIVLGISFSPDKMLQARIFSYPDAQRYRIGTHYAQLNVNRPVSEVNT YVVGGAMNNGMYELDDKAYYEPNSFGGAKEDRALLESDISIEGAMQRYDHRAEDQDYYSQ PRALFELMSNEQKSQLFSNIADSMEGVSEAIKERAIGHFEKNSADYANGVRAALKAKN >gi|257441660|gb|ACYG01000027.1| GENE 231 258196 - 259551 893 451 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1161 NR:ns ## KEGG: CHAB381_1161 # Name: not_defined # Def: ankyrin repeat-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 47 384 77 393 491 132 30.0 4e-29 MDRSETQPAQNSTASRIAASGNSSNPPLTDEDRAAIARYRYERLGAELDLDECVVHGDER MEYFCKLLRSKDTARILAFMREQRITAGDPLYFGITAIMYSSFYNDANTTEELIYHGADI NRTDDFSHSALSYAIENNSTAAAEVLLKHGASFSSVKYVRPWLATPGCCDAYLVADTSDA QVRTYYGTPKSEGTSAVSDPLYYAVAGGFLQMTELMLSSGVRPEITAWTDDHCIAFTLKH RKDERQPNCSIYQMLPQRYDVSMLNLLLKYDLAGLPDDERIQKKYDDCCKDLDTLRKYKK IYLEHMDDYCYDEIILDWSWLDSFNYDIVRFIMRERSKDWEKGAIGFNRGSLPDLNRCGS VTPNTALLGIYDTLIKRYSALCGDELNGASGFDLDKFFRYLHLKGLEFDLKIEYEGKVIR VEEYDKILRRDASKQLEQAGSKTADTASANK >gi|257441660|gb|ACYG01000027.1| GENE 232 259883 - 260266 228 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460650|ref|ZP_05625751.1| ## NR: gi|257460650|ref|ZP_05625751.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 7 127 1 121 121 192 99.0 1e-47 MYVTNVLIKFVVYFCINKGIKGFKIFPFIKVDEPWHGGYLYYSVVVSAHYYLIYLYSSEI YDEVREYFLQKNINIDYIKKTIRFLSRRICEGAVNLKLQFQYFMVAVTKFRSDTEYKYVK FSAKFYA >gi|257441660|gb|ACYG01000027.1| GENE 233 260159 - 260449 95 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPRLIYFYKWENFKSFYAFIYAKIHNEFYQHICHIHKKIITPRKTQRVNTIKNSDIFGKS EKYSYNNLRLPVIGAPLPMLFPLIYISFIGGFDYIK >gi|257441660|gb|ACYG01000027.1| GENE 234 260437 - 261288 623 283 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1432 NR:ns ## KEGG: CHAB381_1432 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 61 283 61 290 296 90 31.0 8e-17 MNEAKPKELKKILNERRQNVEQGSQENSDAQNFDVSKSDNSNLNIEGNLKFQNSNSDDAA SNKNSKTGARDYDKDPIVIKNYSIMHLLFYIIIAIIIPSIFIKILYNKGLIDLYYGGRTY LLYNQNSTFILSVLFLCLFALYCYFAKENDIIINNSHITYFKNISSGLEIFKINNDSFIK KNYKLKINVLCFILCLISLLSGFGYQEIIFVISILVVRFLPIFLFSILQNKKFEFYNPGY LCIKTRTGKQIVPLVSKKDTKEVREYFLNKLDIDISDKVNYFM >gi|257441660|gb|ACYG01000027.1| GENE 235 261465 - 262202 1016 245 aa, chain - ## HITS:1 COG:Cj0410 KEGG:ns NR:ns ## COG: Cj0410 COG0479 # Protein_GI_number: 15791777 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Campylobacter jejuni # 1 238 1 238 241 377 73.0 1e-104 MSRKITIKAFKYNPLSKISKPHFATYELEETDGMTLFIALNVIREKFDPELSFDFVCRAG ICGSCGMLVNGKPQLACRTLTKDYPDGVIELMPLPVFKLLKDLSVDTGNWMNAMSKRVES WIHTDHETDISKLEEKVEPEVAQEVFELDRCIECGICVAACGVAIMRKDYIGAVGINRVA RFQIDALDKRSDEDFYELIGDDDGVFGCMTLLGCEDNCPKHLPLQSKIAYIRRKLAAQGK CGCGK >gi|257441660|gb|ACYG01000027.1| GENE 236 262195 - 264213 2216 672 aa, chain - ## HITS:1 COG:Cj0409 KEGG:ns NR:ns ## COG: Cj0409 COG1053 # Protein_GI_number: 15791776 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Campylobacter jejuni # 1 672 1 663 663 1048 74.0 0 MNVIYCDSLVIGGGLAGLRAAIATGEKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKM SEGDNEDVHFADTVKGSDWGCDQDVARMFAQTAPKAIRELAGWGVPWTRITRGERSAIIN AQKTTITEKDEVHGLIHSRDFGGTKKWRTCYTADATGHTMLFAVANEALKHNVDIHDRKE AIALIHANNRCYGAIVRDLVTGELIAYVSKGTLIATGGYGRVYKHTTNAVVCEGIGAAIA LETGVAQLGNMEAVQFHPTPIVPSGILLTEGCRGDGGILRDVDGYRFMPDYEPEKKELAS RDVVSRRIMEHIRKGKGVKSPYGEHVWLDISILGREHIEKNLRDVQEICEIFNGIDPADT EVITDEQGRKRGKGWAPILPMQHYSMGGIKTKATGESPTLEGLFSAGEAACWDMHGFNRL GGNSVAETVVAGMIVGEYFAEYCQGHDVDINTHDIQKFVDKEQNYMKSLLEKEGKFNVFE IKNKMKDVMWEHCAIFRTGDGLAKAVKELEELYKQSLDVKVSNKELFGNPELEEAYRVPK MLKLALCIAKGALDRTESRGAHFREDYPKRDDLNWLKRTLASWKEGDTMPTLSYEPLDIM KMEMPPAFRGYGAKGNIIEHPDSAVRQKEVDEIREKMQAEGKGRYEIQEALMHYELQPKY KAPNERAGIGYE >gi|257441660|gb|ACYG01000027.1| GENE 237 264224 - 264907 623 227 aa, chain - ## HITS:1 COG:Cj0408 KEGG:ns NR:ns ## COG: Cj0408 COG2009 # Protein_GI_number: 15791775 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Campylobacter jejuni # 5 219 5 226 260 158 42.0 9e-39 MLGRIEGFTGRSIDGKKSRIMALQDVAQSISGLILACFMLCHMIFTGTILIGKGAFEGVV HFAEPGGIYFVTNIVAFVIFVIFVVHAFLAMRKFPANYAAYRAFKAHKMRMKHCDTTLWW FQFWTGFLLFFFAAAHILTIVFGPKITADLAIARFGQLHLFYFVLLIFVVTHASIGIYRL YMKWISIDGTKAEIQRKRALIKKTVFIVWGAFFLLSIIADFKWLSLE >gi|257441660|gb|ACYG01000027.1| GENE 238 265002 - 265820 859 272 aa, chain - ## HITS:1 COG:Cj0407 KEGG:ns NR:ns ## COG: Cj0407 COG0682 # Protein_GI_number: 15791774 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Campylobacter jejuni # 1 269 1 269 271 313 62.0 3e-85 MNYWNEIYAHFDPVAFSAFGINVHWYGIMYVLALLTALFVAKYFVRKDGLGFSDKMLDRY FIWVEVGVILGARLGYIAIYSGEAAWYFSHPWQIFNPFHNGEFVGIRGMSYHGAVVGFVI ATVWFCKKFKTDMWVLLDLVALSVPLGYFFGRVGNFLNQELFGRETSEPWGILVGGTLRH PSQLYEAVLEGLVIFVILFFYRKRKKFNGELICLYAMLYTAFRFFVEFFRQPDDGLGFIF LNLSMGQILSLVMFLIAVFLKQSLKKKLICRN >gi|257441660|gb|ACYG01000027.1| GENE 239 266485 - 267024 741 179 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0854 NR:ns ## KEGG: CHAB381_0854 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 179 1 186 186 206 55.0 3e-52 MKLGELYSVICIIFATNFKGVIDEQKLRGLGKNWIIVNKNIENKNGHELWQKVQGEDYAA LGRDFEALKGAFEMDFFKLISESEVELFYEKCRFKKPFAELKSAHAANMLALLAMIFKQN TDAKSHKILTLYLAQFIIPSFSALATHVQINAKSSYYKALGWFLADFCRVMKETPGLGI >gi|257441660|gb|ACYG01000027.1| GENE 240 267044 - 268201 1047 385 aa, chain - ## HITS:1 COG:BH1472 KEGG:ns NR:ns ## COG: BH1472 COG0389 # Protein_GI_number: 15614035 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Bacillus halodurans # 1 235 6 234 413 151 36.0 2e-36 MIAHIDLDSFFVSVARLADPVLVGKKIAVVGGGDEEIFGGKSELGSVILSASYEARADGV HSAQPVKIALGLCPQLILVRARHGEYRKASREIYEFLLSFTPEIEKFSIDEFFLNLRGTP YDADALGFAAFLQSEIMRRFSLPCSVGLSEAKLIAKLATSLTKPFGVRQILKSQIARELS SVPVAKFPGIGKAAQKTLGKYGIVSFGDALGHREIFEKMGANGRKIFAALSGEDEGRVVS KRERKSIGFGRSFAPCADRDELRRKILILARHLAGEVLARGLKPATYDLKIRYKSREEFS HQISQDRAFSLSLLSETALELFKLCDVKKGAQIIHVALNLSNFSGKSGSSLLFCEIDKKQ QSLDRSLSRIWEKFGIEKLKKASEI >gi|257441660|gb|ACYG01000027.1| GENE 241 268198 - 269199 1231 333 aa, chain - ## HITS:1 COG:Cj0572_1 KEGG:ns NR:ns ## COG: Cj0572_1 COG0108 # Protein_GI_number: 15791932 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Campylobacter jejuni # 2 196 4 198 198 273 67.0 3e-73 MISVEQAIEDLKNGKMLVMVDDVDRENEGDLVFASTFSSAQKVNFAITHARGVLCVALSP QIAQQLGLSLMVDKNTSSHETAFTVTIDAKDAKTGVSAYERNMTIELMSRVGARADDFVR PGHIFPLIAKSGGVLARTGHTEGSTDLCRLAGLSQSAVICEIVKDDGDMARRDDLEKFCA QHGINMISVAQIVQYRLKHETLVKFSEPREGMLCGEAAKFYDVSDHEGNEHRAYIFGEPE KSAQTNVKFHKISSDLEFLSDTKFNDFMRDLDVLRKEGGVLLMLKSAQNRADFKSFGIGA QILAHLGVKKIKILSKSEPKDYAGLSGFGIDIV >gi|257441660|gb|ACYG01000027.1| GENE 242 269199 - 269555 420 118 aa, chain - ## HITS:1 COG:Cj0499 KEGG:ns NR:ns ## COG: Cj0499 COG0537 # Protein_GI_number: 15791863 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Campylobacter jejuni # 1 110 48 157 161 147 63.0 7e-36 MNLYPYSPGAFMVIPYEHVDNIECLSDDTWAEMSRYVRAGVGILKRTLGANGVNIGMNLG AAAGAGIAEHVHYHLVPRWQRDTNFITTIANVRVNGVSFAPLFEKLKAAFVELNLKER >gi|257441660|gb|ACYG01000027.1| GENE 243 270291 - 270758 -194 155 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460665|ref|ZP_05625766.1| ## NR: gi|257460665|ref|ZP_05625766.1| hypothetical protein CAMGR0001_1433 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1433 [Campylobacter gracilis RM3268] # 18 155 1 138 138 223 99.0 4e-57 MRSYRKHSSSGRLRSRAVIKFTTPYIIAKTGLESALGIQGVTIDAQLSALNATSATPRAR SFANVKLNLNPRFLHQLVIRRKAIQTKGVNLNLAPQPLSQRVIINSRRQSAARMLTPRAI FDHVAAAKFKEPLNFKVRRILRILKFTALKFRSLR >gi|257441660|gb|ACYG01000027.1| GENE 244 270807 - 271607 944 266 aa, chain - ## HITS:1 COG:Cj0498 KEGG:ns NR:ns ## COG: Cj0498 COG0134 # Protein_GI_number: 15791862 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Campylobacter jejuni # 1 258 1 257 258 328 67.0 7e-90 MILDEILKRTREDLALRKERLPEDLLGRSLSANPYEPRDVISALRSDEKDPLRIIAEIKK ASPSKGIIREDFEPLSLAVEYENAGASAFSVLTEPHYFRGDLEFIPQIRRYTRTPILRKD FIVDRYQILEALVYGADFILLIAKALEGKQLRELLEFARRLGLEALCEIHDKDDLKKVVF AGADIIGINHRNLETFEVDTSLSERLIPLIPNGKIIVAESGLHSHEQLLSLHEAGVDAFL IGEYFMRQNDVGAALREIKLGAGGEI >gi|257441660|gb|ACYG01000027.1| GENE 245 271610 - 273454 1753 614 aa, chain - ## HITS:1 COG:Cj0497 KEGG:ns NR:ns ## COG: Cj0497 COG0457 # Protein_GI_number: 15791861 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Campylobacter jejuni # 147 474 94 423 425 137 33.0 6e-32 MYRGKVFGGILIAAMILAPQYLSAERGTNAAAAKQSVTDKKASDRNSSIGTKNGAKDAIK KSLINRGVSAKSITKEKLNHAMRAQEDAELNFDLLTALELLHKDPVASMFLYEKAYNKTG SSVYLLEALKTAFAIKDRKNTARYLKLGEKSLSSDSEYLRVKIGYYLGIKDNLNANTAAL KLVTVDPVSRSYAILAATYYAMENFTLAKTYFEKAYELDKTDENLIRLCDVLLNKLDDSD GAIRIIETHRRIYGCVQGMACELLADVYRANKRYLDVAKIDEALYEAKGDNKFLDDMIAI YYYSNDFDKIIELLKKYDYKRELLIDAYAHKKDYKTAIKMARDEFMKTKNYDFLAIEAIY EYESAGKNVDAKTLSSVVAKFENIAPQLKDPVHLNYYGYILIDHDLDVRKGIELVRRALQ KDPDSPYYLDSLAWGYYKLGECDKAKNEMAKIKDAEFFNSPEGKEHLEAIDACVAGTGVA PQNSISQNPTTIKGSAPKDQAPQSPAIKTPAPDSIKSTAPESSALDSARPGPAATRDLTP KDSASQNSAGSANSAVQNQTPNSATSENFAMPINSAAQNSASSRQNSISRQGFMPEQNST SKEPTGSKIQTPRQ >gi|257441660|gb|ACYG01000027.1| GENE 246 273421 - 273792 343 123 aa, chain - ## HITS:1 COG:Cj0496 KEGG:ns NR:ns ## COG: Cj0496 COG0727 # Protein_GI_number: 15791860 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Campylobacter jejuni # 4 121 7 124 124 132 55.0 2e-31 MSEFGFSFDASACERCGGKCCTGESGYIWIDESEIAALAVKFKILSARLKEIYLQKIGAR FSVKEKPFEGGLACVFFDETQRNCGIYELRPKQCRSFPFWEYFKTHTKELEEECIGVRFL AEF >gi|257441660|gb|ACYG01000027.1| GENE 247 273785 - 275026 476 413 aa, chain - ## HITS:1 COG:Cj0495 KEGG:ns NR:ns ## COG: Cj0495 COG4123 # Protein_GI_number: 15791859 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Campylobacter jejuni # 209 411 30 232 233 179 43.0 7e-45 MRLYQPKKGYRYTSDTIFLWNFIRSSGVRKADVASQNDSWALGCGAEFKGATDGGFNAKF CAADYVGDEVEFCAEDCAFSKEESYAANHSVGDDRDFGGKGCAEFQAEFKMEFQAEFWEK FQSGRYKNSYFQNDEARHALKPGSASGENFKFCDEQIAQSLESQKTHDKDFASKFEDAKA RADFAAERLCDGGFAVCDERSPKGALNPRAIYGDVLDVGAGCGILGLLLKRDFKSINLSL LEIQERNLEILKLNSSQNGLAAEILHADFAEFKSEKRFDFIVSNPPFYRERISLSKEPHM ALSKSTASLSLRDFVRSANAHLKPGGTLIFCYEAGKLAKICELLGEFRLNLTRLGFVYPD ISKPAKLALLQARKNSRSPCEIVLPIYASAHGRRTAQAHAIYKSADLTSVDYE >gi|257441660|gb|ACYG01000027.1| GENE 248 275023 - 275970 1137 315 aa, chain - ## HITS:1 COG:Cj0559 KEGG:ns NR:ns ## COG: Cj0559 COG0492 # Protein_GI_number: 15791920 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Campylobacter jejuni # 6 310 5 308 311 304 51.0 1e-82 MIDVYDLAVIGGGPCGIASVVEAKRNGLAHVLLLEKGDNHSQTIRQFYKDKKRVDKEYKG FDSETRGSISFETGTKESVLNYFDELLDSDEIDTNFKSEVEKIEKHADEFYITTSSAGYR ARNVIVAIGRMGKPNKPAYKIPPSITQRVNFNLDKCTINEKILVVGGGNSAAEYAIALCK TNVVTLCYRKPKFTRLNETNESDVMRETKYGNIILRLGIDIEALENENGKVLVKFDDGTE LVFDRVIYAIGGTSPIDFLKKCGIAYDENGVPIVDENLQTATSGLYVGGDLISRSGGSIV VAINHAHTIIKNIRR >gi|257441660|gb|ACYG01000027.1| GENE 249 276317 - 277051 824 244 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460671|ref|ZP_05625772.1| ## NR: gi|257460671|ref|ZP_05625772.1| protein TonB [Campylobacter gracilis RM3268] protein TonB [Campylobacter gracilis RM3268] # 1 244 36 279 279 250 100.0 5e-65 MPDMIAFSIDSIMDDAKQGDISDEPNIPPPSDQSEPEPIPEPEPEPEPEPTPPEPEPIPE PEPIPEPEPIPEPVVEKPKPVEKPKPKPVEKPKPVEKPKPKKEHKVQSSDRNLTAKFDPT KPISLGSGGGGGSSAAGGGSDAITSRGDPSNSDVGKKIFAIISRYAQSHYPKNAQRMRKI GVVGVHFTYTASGDVKGLRVTSSSNVDSLDEGALSAVERTKGSFPKVEKDMEFNFSIKYT LNFN >gi|257441660|gb|ACYG01000027.1| GENE 250 277153 - 277536 523 127 aa, chain - ## HITS:1 COG:Cj1629 KEGG:ns NR:ns ## COG: Cj1629 COG0848 # Protein_GI_number: 15792934 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Campylobacter jejuni # 1 127 2 129 129 109 50.0 1e-24 MSIPRRDGLNIVPFIDIMLVLLAIVLSVSTFIAQGHIKVNLPSSSSSQNPQEDKKVTIKV DSESKIYLDDVAISEDELEKKIAALDKNDLVVLKNDKDSKFSSFISIMDVLKKAGHEKFA IVTEKEQ >gi|257441660|gb|ACYG01000027.1| GENE 251 277537 - 277965 577 142 aa, chain - ## HITS:1 COG:Cj1628 KEGG:ns NR:ns ## COG: Cj1628 COG0811 # Protein_GI_number: 15792933 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Campylobacter jejuni # 4 142 1 139 141 146 56.0 1e-35 MGIMEFLAHYVDYIIFAILGFMSFLVVWFTIERLLFYSKVKASDYKSKALYEEALTKNLT TLYIVYSNAPYIGLLGTVIGIMITFFDMSTASGIDTKAIMQGLSLALKATATGLVVAVPT LIIYNGFVRKVDVLLNRYDEVK >gi|257441660|gb|ACYG01000027.1| GENE 252 278241 - 280310 2256 689 aa, chain + ## HITS:1 COG:ECs4380 KEGG:ns NR:ns ## COG: ECs4380 COG1629 # Protein_GI_number: 15833634 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 53 689 51 660 660 145 27.0 3e-34 MKKFHLALSLCAVFCLSAQADEKSSATDASKSKDSNTQSLGVIEVTSDSSTPSTVDDVKI NTRNATLVKDVFRDIPGVYVGGTNGMNQKIYMRGVSDRGLNITIDGAKQNGNTFHHNADL LIDPDLIKAVEVDVGARSVVNGSGALGGSVAFKTVDASDLLEDGQDIGAKLKAGYTSNNE GYSQSAMLYGRAFDSLDMLAAFKHYGYGFGESGNGKPTGGDGNDINYLFKVGYSFLDFHK ISLSTEHMQYKGLYPLRPEFGSWLNGQLDNRKYERDTHTIKYTYNPSDLLELDITGYYTK HQRIGSTSTNVKWGVETKGGKIGAKSKFETSDLAHTLRYGFDYYRSENYVKPGNLRPERV DNYSVYLEDAMRYGGLTVTPGVRYERHELKTYNGRGANISSYKYKFDEVSPALALDYEIG AGFGAFASYARVFRGPDVIESMMAAGTSRGRPLSWMANENLKATTGNAYEIGGRYKSDLA ENSSVSLTAKYFRTEYKNLIVDNNAAGGIVGCPGGAQGTLCRANAGGADIDGVELYARLI LDDLSLAAGYTHQHVEYKDRVRSGSGYLSSNIIGYRDYGDKYTFNAEYAISAADLLLGYN LLFFDSKNVASAASDEKTKVPSYAVHDLYVTYAPDSGRFKGLEINAGVYNLFDKAYASHS QRSADFTGDSNAIDWEPGRNFKLSVAYKF >gi|257441660|gb|ACYG01000027.1| GENE 253 280672 - 282066 1440 464 aa, chain + ## HITS:1 COG:STM4590 KEGG:ns NR:ns ## COG: STM4590 COG4452 # Protein_GI_number: 16767831 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Salmonella typhimurium LT2 # 24 447 17 427 449 194 28.0 4e-49 MLNSTKNAIRGAFWTKPFIVLVLLLLLLIPLSFIDNLTYSRSETKQLAQDSILTPVGGEL QIQGLAIVVPYAEIIEAIDKSNNELVKRRVEKNFIIVPKNYSLAAEIDPTYLKRGIFRVP IYNGDFALKADFEAINYTELGVDPARLNFDEAVLVLGVGNQKSFTASPALSLNGKELKQY HGNTEAKIFDRSLIYKLPASALSSDFSISGTLKIQGGEALHLAPIAQNSRFEISSTWASP SFGGGFIAKSREVSASGFKASWEVTGLAAGIAPAWLADQDDRVAMTNWRSNDDRNDAVSI GFIEPVNNYSLIKRCTDYALLFLAVPFLAIFLCEVYTHERIHPIQYLLIGLEDVVFYLLV LSLSEHMGFALSYAASAIAVSAIVFFYASAIFKGARWGIFITCVQLVSYAILYVILNSED YALLMGSLMIFAVISLVMYFTRKLDWYDTAIPSGEKKQEQEPEI >gi|257441660|gb|ACYG01000027.1| GENE 254 282425 - 283432 536 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Slackia heliotrinireducens DSM 20476] # 1 330 439 777 781 211 39 5e-53 MILAIESSCDDSSVAVMDERSFELKFYEKISQEADHAKYGGVVPELAARLHTEALPRILQ RAKPYFSELSAVAATNTPGLSVSLIGGVNMAKALALALNLPLIGVNHLIGHVYSLFLGSE ARFPMGVLLVSGGHTMVLDIGAAGGIEILATTGDDSFGESFDKVAKMLGLGYPGGALIEE LAKDGEPRFELPVPLKGDRRLEYSFSGLKNAVRVQIEKLKEAGELDERAMRDLARCFEDA ACAHILDKLQRIFELRRFARFGVVGGASANLHLRGLLTDLCERAGCEILFAPMKFCSDNA AMIARAAIEKLRKKEFTAPAELEIIPHLNLRSAFE >gi|257441660|gb|ACYG01000027.1| GENE 255 283491 - 283955 416 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460679|ref|ZP_05625780.1| ## NR: gi|257460679|ref|ZP_05625780.1| hypothetical protein CAMGR0001_1447 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1447 [Campylobacter gracilis RM3268] # 1 154 1 154 154 281 100.0 8e-75 MAFENAIITKEDDEKYGLSKIYYKYNPYYKIFVGRLDWTIDRVRNCWLWKVYNFPDYEYD HNTLEKAIWILYYNGDFIEVVLDYEIDKTVGPKRLHRIWQLLGLSPMHTKTLSTDEVISI LNESLETYGEYGYTETMQSSYSYSMEIQNLIKEK >gi|257441660|gb|ACYG01000027.1| GENE 256 284277 - 285452 1052 391 aa, chain - ## HITS:1 COG:Cj0016 KEGG:ns NR:ns ## COG: Cj0016 COG0603 # Protein_GI_number: 15791415 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Campylobacter jejuni # 237 387 70 222 224 179 61.0 1e-44 MRALCVISGGMDSATCAYIARREGYEIVALHFDYDQRTMGKERECFGKICDDLGVAKRLI LDARFIAQIGGSALTDGTLPIRKGAAELCGAANTTGAEIDSAANSKSAELGELNFIETNS IAEVNGQNSIAANSTNAETGGQNFTASNFMASSADATLGADSARDSRLQSGEILIQDAEI LLGGDEFSPQGSKILACDDKISSQGSKILVQEGEISSQSGAQPQQGDKISSKRAEGEIPS QSQSDKISPSSGESAFSDLPSTYVPFRNGVFLSIAAALAEKERCDAIFIGVVQEDSSGYP DCGASFIAAFERALELGTSRDFHPRIKTPLVHLSKAQIVSLALEIGVPLELTWSCYERED AACGLCDSCLLRLKGFAGAGAKDKIPYAIEA >gi|257441660|gb|ACYG01000027.1| GENE 257 285507 - 286136 877 209 aa, chain + ## HITS:1 COG:Cj0121 KEGG:ns NR:ns ## COG: Cj0121 COG0319 # Protein_GI_number: 15791509 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 135 204 63 132 135 90 64.0 3e-18 MILCEQPYPEILDAIAAELGGESVELIFVRGEEMRQLNAQTRGIDKATDVLSFPLDPAAF AGFGEDLSEESSAHENSGDKILNAANSASENTGAANSASKNSNTMNSENSEGESPNDENL KNENFDGGNFAPALLGSVVINLDLVELKAAQLGHGRDDETALLFTHGLLHVLGYDHESDD GQMRAKECEIIEKFRLPKSLIVRTEGNEE >gi|257441660|gb|ACYG01000027.1| GENE 258 286341 - 286910 403 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460684|ref|ZP_05625785.1| ## NR: gi|257460684|ref|ZP_05625785.1| hypothetical protein CAMGR0001_1451 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1451 [Campylobacter gracilis RM3268] # 1 189 1 189 189 332 100.0 1e-89 MKNPLRYVDYCNDLIKFGFAKKHNFLAMIAVFSMVLMPICFSAAYAVAPSEKSLQNPYIF SGTVEKFFRFHSYKSGNGCKISVAGNGKIFSWEFIDFHIDTNKYDYEEKYFCDFIFSRYI NNKCVILKMINLHIVEFGDCDNKVIIEVDLRQNFFEQKLFLCSGIILALILFLIFFKLNK AYKNLLKGV >gi|257441660|gb|ACYG01000027.1| GENE 259 287201 - 287815 381 204 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460685|ref|ZP_05625786.1| ## NR: gi|257460685|ref|ZP_05625786.1| hypothetical protein CAMGR0001_1453 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1453 [Campylobacter gracilis RM3268] # 1 204 1 204 204 384 100.0 1e-105 MRVLKFIFIIAASILFCYVAEELINYLIIKPRIPMEFTDINLTKAGNKAELYINNKDDKI CRYFTLDFVSYDYDRDMKLLDDEFANTYIGGEYDVNETLLRGTKIPLSLKIYKIDNEPNK FGRGKEYFYYKLKPVFAEVRNLRPAYMQTSIYRGEKHYDAYSATIACTPLQKGMYKVELE NLQDLPIFSNVKIYFTTKDSGLKY >gi|257441660|gb|ACYG01000027.1| GENE 260 287991 - 288797 499 268 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460686|ref|ZP_05625787.1| ## NR: gi|257460686|ref|ZP_05625787.1| hypothetical protein CAMGR0001_1454 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1454 [Campylobacter gracilis RM3268] # 1 268 1 268 268 515 100.0 1e-144 MRIHILILMIAFALFANANDVSDTEIPFDLKIALWKANDRKVVRNNPSGMVEGETTFNGK TVSFWQIDRNATLKKEYEEHLSKERDFCNDFYDDLFEWKNISVIKPLVFDTTDYNNPVLK KNMGDCWYMDMNTTIRDGFSGRGFTLYKFDNKLLYIMTYRDFRQYEMSFANFMYILDPQE CSKIIKDPSYDSYYSRADFEDYRNKIAGDTLIYFGPIKYKSEDYLLFIDSVNLINGLKAV FIKISKFKDKVSQTSVCRNLYLNTKIYR >gi|257441660|gb|ACYG01000027.1| GENE 261 288806 - 289606 418 266 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460687|ref|ZP_05625788.1| ## NR: gi|257460687|ref|ZP_05625788.1| hypothetical protein CAMGR0001_1455 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1455 [Campylobacter gracilis RM3268] # 1 266 1 266 266 520 100.0 1e-146 MQIRAFILAILFAVSFAKADDIKHPSMPWQLEPILWKIQDKKVVRKTLHEPMIRGATTFN GKSFYFFTIEDNATLKKEYEEHLSKERDFCNDFYDDLFEWKNINIIKPLVFDTTDYNNPV LKKNMGDCWYMDMNKTIKDGFSGRGFTLYKFDNKLLYIMIYKTTPYIYQTDDFANLAYIL DPQECSKIIKDPRSRVNLEILGNIIYKPRLFYAEPIRYKDIDYLLFIDFDNTDSGQLFNV TIRKFKDGILQMPVCSNSYLNTKLYR >gi|257441660|gb|ACYG01000027.1| GENE 262 289794 - 290144 126 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460688|ref|ZP_05625789.1| ## NR: gi|257460688|ref|ZP_05625789.1| hypothetical protein CAMGR0001_1456 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1456 [Campylobacter gracilis RM3268] # 1 116 1 116 116 217 100.0 2e-55 MAAIGLATCIIKCSDAIINGENGHCKIYYNLDFDYIHFYDGRNQDIALGYDFDNESIEFY KKLSDHYDYKGKKCRSRRVYSEHHATFALDNFEYVTFWLGDHGEFTLKDPYIHECE >gi|257441660|gb|ACYG01000027.1| GENE 263 290231 - 293038 2285 935 aa, chain - ## HITS:1 COG:Cj0684 KEGG:ns NR:ns ## COG: Cj0684 COG1198 # Protein_GI_number: 15792033 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Campylobacter jejuni # 321 756 114 549 617 545 57.0 1e-154 MLYYEVAVLGASLKPLTYSSNFKILSYQIVFVPVKSSVKSAVILREVAKPAFKTKAIAEI SQLKFTPFQIALANFIAYYYVCENGVAFGIFEPASDTAQDLRNSQEDPTTEQNRACKQIP VSKPTSACKQTSTCEQKFISEQNSITAQNSTLDGNFNATQNSISIQNSALTKNSTTTENS VTVINSAIAPNSMQRQNLKQAPNSTSQNLALNSTLTQNSIQERDFVDEQNSASIQNFALI QNSAAMKTAINFAAAPGSAYKQNFAIAQNSIQERDFAEGENYVSIQNSASAQNSVLIQNF DATAQNPISQPLSPLQIGKIPNLTPAQEQARKFAEANETSLIFGDTGSGKSEIYIALIAQ ALAAGKQALFLMPEISLTPQMTKRLQSYFGERLGVWHSKISPKKKREILAKFNAGEIRLI AGARSALFLPFSDLGLIVVDEEHDDSYKSAAAPRLNARDAAIFVGKKLGIRVVLGSATPA LSTYAKQPHFRLRGTYFSSAKRFIFDESETGLSPKILTEIGRSLEAGKQAVVFLPTRANY KYMVCENCGQIVRCPFCAVGMSYHADAAALKCHYCGFSTFYKASCENCGGEVMQARKIGT GELAAQLAARFPSARIAKFDRDEITTQRKLEALLNNFNAHKIDILVGTQMLSKGHDYHGV DLAVIMGIDEHLSYPDFRAREKTLALAMQVAGRAGRSGQGRVVIQTRQSGFFRDYIENYD DFLRDEAEFREGLYPPYMRLLRVLISHKNENAASEIMNIALELLRRKQAGGSAFVLHDGL DAGQINLSALNLQNFAQQGGKQMSNSKFQSPDLRASNAKLSPQKNASNLKNNAQITACDG DADSVNLKPKRNGAAQNFINLETENPAENSAQYLKEKASESFEIIGYGKAGIAYIASKFR FEILLRASSHVPLINAARALEHLPVEIDMDPVNFG >gi|257441660|gb|ACYG01000027.1| GENE 264 293043 - 293516 364 157 aa, chain - ## HITS:1 COG:Cj1343c KEGG:ns NR:ns ## COG: Cj1343c COG2165 # Protein_GI_number: 15792666 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Campylobacter jejuni # 5 83 3 84 171 59 36.0 3e-09 MKNLKAFTMIELVFVIVVLGILAGIAVPRLAATRDDATIAKMRGDIAAIRSGLSLVRSEN MMRGVTTWPALEGSDNATLFEGVLQQPIYPMRDGGRNGWTLVTNGNANATSTYIARVAGK RTTFDYYPTSALATAAGRNVGSFDCDHKDELCQSLAQ >gi|257441660|gb|ACYG01000027.1| GENE 265 293599 - 294669 775 356 aa, chain - ## HITS:1 COG:Cj0847 KEGG:ns NR:ns ## COG: Cj0847 COG0688 # Protein_GI_number: 15792185 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Campylobacter jejuni # 198 347 119 266 266 176 59.0 7e-44 MRSFISRIFGVIAAVKFPKFIQNFINRKYVEFFKIDMSEFDPPQSYASLNALFTRRLLRP REIAADERAFISPSDGVIFESGTCADLRAFSVKGCEYSLSELLGRTFTASESGGAVKNLD DGAVTTNGSGEAGTGCAKDAGTWMKFRAAQAKIMDGESGATYAASGVRAKIYSDESGVSR ETSTIGARSSENTKGVNLSYANIYLSPRDYHHYHAPCDLSVTEALYIPADLYSVAKKFLL KIPNLYAKNERVILKCKMPNGGILWMVFVGALNVGKMKFDFDARIQTNACASRAEALYEY ENLNFKKGDHLGNFELGSTIVLVAQSEFLKFETPTDTSVKFGQKIAEFNEISQNSI >gi|257441660|gb|ACYG01000027.1| GENE 266 294670 - 295797 869 375 aa, chain - ## HITS:1 COG:jhp0380 KEGG:ns NR:ns ## COG: jhp0380 COG1408 # Protein_GI_number: 15611448 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Helicobacter pylori J99 # 72 372 61 364 370 206 39.0 5e-53 MKSAYIFPIVGTVLFLFFNLYIYRSISARFTPYKGFATFLPALILLCVALAILDAIFFVG FGLNGSFKNELLYKLCVFCMAASFSLFFICLAYDVLSAAAHVVKFSQNRRKFLKTFIDVT FVIMAFSYIFKGLYNALKIPKITEREIKIKNLARELNFAVISDVHLGEFLKKEFLQGVVA QINSLNYDALLIVGDMFDLRSDELGDILQPLEVIKKPIFFVTGNHEYYRDDASGLIKAMQ KAGVRVLQNESVEFEGLNLMGVHDLSGFRFGYMQPDLSAVLAQADPDKPKILLAHQPKYV VDFVRDEVDLCICGHTHAGQIFPWTLLVLLSQKYLYGLYNDGLKQIYVSSGVGFWGPPIR VFADAEIALLKLRKA >gi|257441660|gb|ACYG01000027.1| GENE 267 295801 - 296439 632 212 aa, chain - ## HITS:1 COG:Cj0466 KEGG:ns NR:ns ## COG: Cj0466 COG0664 # Protein_GI_number: 15791830 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Campylobacter jejuni # 19 206 8 193 198 91 32.0 1e-18 MLERIPYFKALSAAQINRLEQISIHKSYKKGEILFFEGERSQYLLILLKGILKIYKTSAK GREIHMREIRPISLVAEMVNFEETSYPASGVFSTNGEVLKIDYEKFKNEFMSDPKICLEL LKSMSEKIRALNAVFDNQVVLNCDGKIAKFISENFDIFMSTKYTRIAKILNVTPETFSRT ITKFKKSGALILDDKQEITGFDKDKLDEYIQG >gi|257441660|gb|ACYG01000027.1| GENE 268 296449 - 296850 619 133 aa, chain - ## HITS:1 COG:PM1564 KEGG:ns NR:ns ## COG: PM1564 COG1970 # Protein_GI_number: 15603429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Pasteurella multocida # 1 133 1 133 133 169 69.0 1e-42 MSFIQEFKEFAMKGNVIDMAVGVVIGGAFGKIVTSLVSDIMMPVLGLLTGGMNFTDLKIV LKEAVGQTPAVTINYGSFIQVTVDFIIIAFCIFCAIKAINKLKKPAPAPEPAAPAEPSEE IKLLTEIRDLLKK >gi|257441660|gb|ACYG01000027.1| GENE 269 296965 - 298281 1442 438 aa, chain + ## HITS:1 COG:Cj0845c KEGG:ns NR:ns ## COG: Cj0845c COG0008 # Protein_GI_number: 15792183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Campylobacter jejuni # 1 433 1 428 431 525 63.0 1e-149 MYRFAPSPTGDMHIGNLRAAIFNYICSLQDKSGFILRIEDTDTARNIEGKDQEIIEILKR FGISWQSLYYQSKNLKFHQQFAAKLLSEKKAFCCFCSEEELEAKKQAAKDAGEAYRYDGH CEHLSDEEVLNCGKPFTIRLKKPDHALEFTDAIKGRIAFEPQNIDSFVIMRADKTPTYNF ACACDDMMQGVSFVIRGEDHVSNTPKQNWIRQSLGYDGEIKYAHLPIILNSEGKKMSKRE DSSSVKWLLQSGYLPEAIANYLILLGNKTPREVFSMDEAVEFFDIAKISKSPAKFDEDKL AFINREHIKRASKQRLAELFELEPKFAPLIKFYTQEASLIPRIKEKIAAIYGMKDIPQEW ATQAQALREAILNLLSSNGASAEFNDFKAALSQATNLKGKSLFMPLRFLLTGAPHGPELS ELYPLIRADLKEILDATK >gi|257441660|gb|ACYG01000027.1| GENE 270 298268 - 298564 342 98 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1379 NR:ns ## KEGG: CHAB381_1379 # Name: not_defined # Def: YGGT family protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 93 1 90 97 68 47.0 1e-10 MLLNSVFYGILVSIHYVIQAYMMLIFVACVLSFIRPNPFGKFYKIVRVISALTEPAFALV RRYLPTTFGGFDLSPLVILFVLMFFDNMIIYILNRSVL >gi|257441660|gb|ACYG01000027.1| GENE 271 298561 - 300225 1693 554 aa, chain + ## HITS:1 COG:Cj0843c KEGG:ns NR:ns ## COG: Cj0843c COG0741 # Protein_GI_number: 15792181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Campylobacter jejuni # 6 553 3 538 541 403 41.0 1e-112 MRAICKFCLILTLLCTASSGKILSYEQIKDEPKSLAKDYYIYRLIDETKYNKAEIRALKQ SIFRYKGKLKEKLDRIFGAIRPPKRPDRCAGVTAANILDANLTCKKARSYPNFIAKLSPS VREMLASQLEKYQDAASKNAVNLLRGFNDENPSEYFMQSRNAQNYFLYYDYLKGAGKDAL IDIDADAAFVSELASQKGFKAVLNDALINRKYPHLRRSLTGVDPSAVEKDVAFMLGVNAV MQGDEGAALAFFNRAAASFEKPHDVHNAKFWIYLLNGDQNVLRQLASSDYYSLYALYAKE VLGDRNLNIIIPNPAKNSIEGYDITDPFAWVRTKNSADRMSRPQLLEFAKKFDTKQSIGE YSYIMNKASGGKDNFYPTPFMEYIGDGDNRRKALILALARQESRFVPASVSTSYALGMMQ FMPFLANEIGKKQLKIDGFDQDDMFRPEVAYRFANIHIDWLERKIYSPVFIAYAYNGGLG LVKKMLQRGDMFNKGKFEPWLSMELVPYAESRDYGKKVLANFIIYSQILDPRAKISVQQE LQDLLIPNRSDDFR >gi|257441660|gb|ACYG01000027.1| GENE 272 301107 - 302063 1002 318 aa, chain - ## HITS:1 COG:no KEGG:Celly_3065 NR:ns ## KEGG: Celly_3065 # Name: not_defined # Def: hypothetical protein # Organism: C.lytica # Pathway: not_defined # 1 238 1 228 269 196 42.0 2e-48 MGYDISYHAIGKDEISQWYFKPLKLAQKGDFEAIAKIAREAGMDEFYVEKYADGFRSALQ YGTGGIFNKTHGFHLAVAQGYFREYFYTRGTAFSFLAAQNSKFKPYISDWREVLPAEFLA EFSGEIHNEIIENYCCGAYLGAADVQNLLRDYEADGEIKEAIDEFYAQNLPVFLNALNFA AELGVGLLEATEVVEPNPIDLNRSESFSNLFNCDTQGALIYAEIAAQQIGEAIERSKAGG GVRMVRENFTLRSANATGGSSAMETDGGEMKASGENSVPRSGDTIEDGSENSAAEDREDA TSAGGEKSLFGKIKGLFK >gi|257441660|gb|ACYG01000027.1| GENE 273 302074 - 302595 563 173 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0731 NR:ns ## KEGG: CHAB381_0731 # Name: not_defined # Def: putative lipoprotein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 23 173 11 163 165 165 52.0 9e-40 MKKFYFGGALNGLLKGSLLAALALFLNSCSANDPRHDPLKNEFLAYTQKFESVRAGDRYL SVATYLNPVAPELRNAAEDEVFLLTSYPKEIQILAVQINGANANVTPLHDGDPLLQKELF KIAWASRYKITAPKSDKDELMLSYRTSNGLDATMKFRKISKSLYWQPQIDLKD >gi|257441660|gb|ACYG01000027.1| GENE 274 302696 - 303184 564 162 aa, chain + ## HITS:1 COG:Cj0841c KEGG:ns NR:ns ## COG: Cj0841c COG1763 # Protein_GI_number: 15792179 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Campylobacter jejuni # 1 162 1 159 163 165 53.0 3e-41 MKRLVIAFSGPSNSGKTTLICKIAKIFIASGLRIAIVKHDPGDKARFDVEGKDSAKFSEL GAETVVMSPTRTSYFSQRCMQIDEVVRMLGEFDILLVEGLKTLPLPRISLFRDKIDPAYL PFSDAIASNLSGEQMDKFCCVNFDIDDAAGISEWILKNAKKM >gi|257441660|gb|ACYG01000027.1| GENE 275 303194 - 304042 932 282 aa, chain + ## HITS:1 COG:Cj0840c KEGG:ns NR:ns ## COG: Cj0840c COG0158 # Protein_GI_number: 15792178 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Campylobacter jejuni # 1 280 1 280 280 368 62.0 1e-102 MQEIVKSIQNIALQIAEELKYADFGYTDHHNSTGDTQLKLDVKSDAIIEAEFRKNPLVRA LISEEKDEILTLREDARLIVAYDPLDGSSLVDVNFAVGSIFGIYEDEISPTNLKAAIYCI YGPRLEMVVCEDAPKLYRLNREGKFSFVKDLRLQQKGKLNATGATQKGWSEPHRKLVRAL FDEGYRLRYSGAMVSDLHQILLKGGGLFSYPATSDHPQGKLRVTFEVLPFAFIFERAGGA TSDGANGSLLQLKIEKIHQSSPCFFGSKYEIAKMHEIYGEKN >gi|257441660|gb|ACYG01000027.1| GENE 276 304042 - 304251 311 69 aa, chain + ## HITS:1 COG:no KEGG:Nitsa_1094 NR:ns ## KEGG: Nitsa_1094 # Name: not_defined # Def: hypothetical protein # Organism: N.salsuginis # Pathway: not_defined # 9 69 11 71 71 67 49.0 2e-10 MADTEVAAPRDVYDEILDKSLAALQACQAEHNLTSCLECEKLLDCAVRDKYVKAVYESMS HGATGDFSF >gi|257441660|gb|ACYG01000027.1| GENE 277 305285 - 305854 607 189 aa, chain + ## HITS:1 COG:Cj1049c KEGG:ns NR:ns ## COG: Cj1049c COG1280 # Protein_GI_number: 15792376 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Campylobacter jejuni # 1 182 11 194 199 91 39.0 8e-19 MGLGVSVPIGPVNVLIMSYALRSYTKALCLGLGAMSADMLYLVLSAFGISQLAKIPIVFA CISVFGACFLLYTAYAIWHGAASSVQPASVEASSGVALYGKGFLINLLNPYVIMFWLSVS AGTARADFALALAGLVSGILAWITLFPLAIYLARSKLPNIVVRAFAYISAFILVFFALKL LYAIIFAKI >gi|257441660|gb|ACYG01000027.1| GENE 278 305870 - 307048 1332 392 aa, chain + ## HITS:1 COG:Cj1048c KEGG:ns NR:ns ## COG: Cj1048c COG0624 # Protein_GI_number: 15792375 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Campylobacter jejuni # 1 391 1 365 365 413 54.0 1e-115 MKPIEILKELIKFRSLTPSDDGAFNYVSMLLADFSEDRFELNGVTNAIFTKRFGQGPHLC FAGHIDVVPPGEGWASDPFKPVEADGFLYGRGAQDMKSGIAAAICALAAARDFKGTLSLL LTSDEEGEGIYGTREMLSKLREQGALPDFAVVAEPTCEVRFGDTIKIGRRGSINGILTLT GIGGHAAYPDKCINPVHILAPVLASLAGHDLDAGSEDFAPAKIVITDIRGGSQVVNVTPK DVRVMFNVRGGVGLGLKDVRDYVLRLFELDAKDALCSESESCGKLEMSCTAQLRAGASLH LALKSSSKPFLTQRNSKIVQKLSASVQKICGAAAELNTAGGTSDARYFAEFGVETAEFGV RNDTIHQINERVEISDVENLAKIFIDLIENFG >gi|257441660|gb|ACYG01000027.1| GENE 279 308107 - 308667 617 186 aa, chain - ## HITS:1 COG:MA4322 KEGG:ns NR:ns ## COG: MA4322 COG0350 # Protein_GI_number: 20093111 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Methanosarcina acetivorans str.C2A # 1 177 1 153 156 125 41.0 6e-29 MQKAFFNSPIGMLEIWDDEIGICSIDWVKSSVYGPNDEIFKKHDAGLIGFVRATDDKGRD LRLSDLRKNLALCTDELSAYFRGELESFSVKLSQNGTQFQKSVWSALLDTPYGEVVTYGE LARAIGRPHASRAVGSANGKNKIPIIVPCHRVVASGGLGGYSGAGGVATKAWLLNFEREN LAKLGK >gi|257441660|gb|ACYG01000027.1| GENE 280 308811 - 310763 1078 650 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460719|ref|ZP_05625820.1| ## NR: gi|257460719|ref|ZP_05625820.1| hypothetical protein CAMGR0001_1487 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1487 [Campylobacter gracilis RM3268] # 18 650 1 633 633 1115 100.0 0 MKWFLASAKMSYNPKELMKKILAGSDFKLKGSVKGRVRVASRDGAIVNFTAADFGVQSLN DKISLSGEQFERFRARIFGILNSGGRELTGRLTLSSTPKKKARADRLRTADGYAEFDGAF DFGSFCGGDSGAVSSEAGGSLAKTSYATNARRGERDFSARSAQSAQGFTSQAEFQDVSQA EFYGAAQAEFCADTAWDTARENCILQNDAAQDDMSVGLAASFEESANARSKNFMPQSSVS ANSAKGQSFIPASRNFISAQSSALVRDSAFEAQNSNFTAQAENFVAENSFVAEQDADLRS KNSTAQSSASKNSTFANSALDIKCANDCKPQGSEFSKGQSAKFASCRAANFALENALEFA PQDENLVGEDSIFLAKGQNYALKNSDEQNLAQKSSTQEWQPLNLPPQSGNEFALEFERSA QPALTGENSTVASSMAEGALGDEPASAAFGSESTFATKPVNFYGKPAHKAPTKERARLPG RPQALPIVSASRPISPSQAPRARLIELKPRFIGIAHRIKISFLKKSASEPGEGVLARVRI PLLMENFGLNDILSSTASYQMAKKMVRTIADLYIAKDLRGVHIDVPVRLEMGFKSGISDV SNHAFIFKLIEDSLVKNGVIDDDNADIVREIKLFKQDVFDGVLVNLVRFE >gi|257441660|gb|ACYG01000027.1| GENE 281 310738 - 311550 855 270 aa, chain - ## HITS:1 COG:Cj1235 KEGG:ns NR:ns ## COG: Cj1235 COG0739 # Protein_GI_number: 15792559 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 1 265 1 271 273 239 49.0 3e-63 MKFLAIFALLAIKIFALDIVNGDVVILKLDKSTTELSFGSKQIPLITAPNSSDKIAVLAA NYRAKGDFALRIVDQSGSHEQIVALKKGEYKKEALSVAPGKVKPPKEAATRIKKELDEAN AIYAITTPRYLFSTPFELPLNSKITSAFGNARTFNGELKSYHSGTDYRAAVGTAVRAAND GVVVIAKDRYYAGGSVVIDHGGGIYSQYYHLSEIKVTLGDHVRKGDEIALSGESGRVSGP HLHFGIAINGVSVNPLSFVAKFNEVVFGER >gi|257441660|gb|ACYG01000027.1| GENE 282 311659 - 312474 839 271 aa, chain + ## HITS:1 COG:XF0565 KEGG:ns NR:ns ## COG: XF0565 COG2930 # Protein_GI_number: 15837167 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 46 189 50 192 301 89 32.0 9e-18 MKKFLLLASVALCGLLHADVVANQEVIAATNVVRSFVAANNFGTDERYLTSAKAVAILTD VKRLAAGASLQYGDGIFSVKGENGEWSSPIFIKYKGYGVGLQAGYETSDIVMIFHTTKSY QDIFTGTDTLEINVGAAAGGVGRRTGRATDLPDISAWMVSPGEQTGVYLGVSIDNGRITI DDQLTNDFYERIYDYEDILNDSPRANKYAKRWKEVMRKYFTNGEKYGASSSAAIPVNHVQ KKYPDGKPIISNRSPRTHAKATRSKKAKKAK >gi|257441660|gb|ACYG01000027.1| GENE 283 312976 - 313704 560 242 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1186 NR:ns ## KEGG: CHAB381_1186 # Name: not_defined # Def: type I secretion target GGXGXDXXX repeat-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 2 236 6 247 618 102 35.0 1e-20 MSRELVAKQELDKAEVRLRKNSDLVRQLTELLKDALSGADMSLNGLQRYIEINGKKYTKA QLDELGKKPRYAGIGKALAGIADDYADGQSFGHTVVGAAVDFGLIAITKFIHVVGWITLW YDIGNLLDKLDGKDSGIFDLRKQVQNLWDKITGDGLSDIDMNALQKGILKVTMPDKTAYA RPLSSIFFPYEVTPSGLLTGDYKDDVLLGGYGDDTLMGKGSGDLLIGGYENGKTNYKSFQ RV >gi|257441660|gb|ACYG01000027.1| GENE 284 313723 - 314529 325 268 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1187 NR:ns ## KEGG: CHAB381_1187 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 268 1 257 260 72 26.0 3e-11 MENFENWNKNVKKRDLNSNENANLNDFNQRDYDKEPIVIKNPYEFFLKNLDLFCFIGAFV ILSTACIDYTDNIHKKEIKILLYFPFAFVILHIIWAFYYYIIKNKCETKFTNKTIEFIIN GEVKRVKNLIDLEPITRNFKLSYSLGVYFHLFLFFLIILISISEKSLLYVFIIMVYYILW FLLNFLFKLIFHLILGGKLKDFSLYPAIIFDYPQYIGGRLWRLATIDMRPYNGKFHMVYI IHKQDYLDLQKYFSDKKHINLNLVEKKF >gi|257441660|gb|ACYG01000027.1| GENE 285 314516 - 314902 164 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460725|ref|ZP_05625826.1| ## NR: gi|257460725|ref|ZP_05625826.1| hypothetical protein CAMGR0001_1494 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1494 [Campylobacter gracilis RM3268] # 1 128 1 128 128 230 100.0 2e-59 MKGTNSNGITDKGEPSSLADNNIKSIDLNYKEITIDENSNTVKQGFKATLINELIYEWAG VSEAAKDSRGIYSCLSKVDIEFAKAIKLKARRGLRFYNIHCRQIASLVKFTRNDEKSKEN GRIKFGKF >gi|257441660|gb|ACYG01000027.1| GENE 286 315596 - 316906 1109 436 aa, chain - ## HITS:1 COG:STM2082 KEGG:ns NR:ns ## COG: STM2082 COG2148 # Protein_GI_number: 16765412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Salmonella typhimurium LT2 # 4 435 11 475 476 243 34.0 7e-64 MKKQLCVLIILAVDIFGIWLCFGLAVVLKNLLYGDSVLLDIGRYQGFAPSYVIMIFLFFY QGIYSRRYDFWHESRILVRSCFFGLLLSLALLALIKVNYEFSRASFILSFAFMAVVLPLF KLITKRELFKFGLWRKRAKILGEGEEFESAVLESAYLGYVRALGNDYDVLFIGGSRLGAK ALNELIEHNIKKNKEILFTPVLRSYDFTQVDIYSVFASRTSLFAIRNSLKSPLNLALKRG LDLALIFLALPLLVPIFGVIALMMKLKEPTGRIFFSHQRMGFGGKPFGCLKFRSMKENGD EILAQYLKQNPQEVEYFEKYHKYEHDPRITTLGDFLRKSSLDELPQLINVLKGEMSIVGP RPCAQYERKDMGEYADLILAVKPGITGLWQVSGRSDVDFATRAGMDTWYMKNWSIWNDIV IILKTFKVVLAREGAS >gi|257441660|gb|ACYG01000027.1| GENE 287 316908 - 318272 1606 454 aa, chain - ## HITS:1 COG:jhp0037_1 KEGG:ns NR:ns ## COG: jhp0037_1 COG0836 # Protein_GI_number: 15611108 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Helicobacter pylori J99 # 1 330 3 340 340 288 46.0 1e-77 MTNIILSGGSGTRLWPISRTLMPKQFVRLFDDRSLFMMSYERNSPLCERTLVVSNEQQYF LALDQLEILGARGVKFLLEPVGRNTAPAIALACLSLKAEEIVFVTPSDHLIRDEAAYKNS VLRARELAKQGFLVTFGIRPADANTGYGYIEASGEDVLKFHEKPGLAAAQSYIAAGNFYW NSGMFMFKAGVFLSELKAQSPEIYEACVRAYENSNAENPLRIKLDDMQEIPADSIDYAVM EHTSLAKVVPADIGWSDLGSFDSLDAELPKDANGNTASEQNIALNSKNNLIIGSGRTIAA IDIEDLAIVDTKDALLVCKKGSTQKVKQVVERLGDSDLARVHVTTHRPWGSYTVLEDERG YKIKRIVVKPGKRLSLQKHYHRNEHWIVVSGTATVTVGERNFLLRENESTFIRMGEVHRL ANEGKIPVVLIEAQVGSYTGEDDIVRLQDDFNRS >gi|257441660|gb|ACYG01000027.1| GENE 288 318265 - 319389 1229 374 aa, chain - ## HITS:1 COG:AGl3095 KEGG:ns NR:ns ## COG: AGl3095 COG0438 # Protein_GI_number: 15891662 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 361 34 399 407 395 52.0 1e-110 MKKALIHDWFSTYAGAEKCVESFTDIWDDFEIYSLIDFLSDADRNKILKGKRAHTSFIQK LPFAKDKYRNYLPLFPLAIEQFDLSGYDVVLSSSHAVAKGVLTHSNQLHIAYVHTPIRYA WDLYYQYLRESGLDRGLKGMLAKYFLHKIRLWDASTANRVDHYVANSRYIARRIKKTYGK PSDVIYPPVDVDKFTLREAKEDFYLTASRMVPYKKIDLIVEAFSQTDKKLLVIGDGPDMA KIKSKAGKNVELLGFTDDETMADLMGRAKAFVFAAEEDFGITPVEAQACGTPVICFGRGG ARETVLDGESGLYFMEQNTKELLAAVAKFEQNYDKFEPVKIRENSLKFSRARFEAEIKSY VEKKYEEFKDGLND >gi|257441660|gb|ACYG01000027.1| GENE 289 319386 - 320489 785 367 aa, chain - ## HITS:1 COG:SA0125 KEGG:ns NR:ns ## COG: SA0125 COG0438 # Protein_GI_number: 15925834 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Staphylococcus aureus N315 # 1 354 1 382 388 100 26.0 3e-21 MKILFITLRADHGGGPKHIDLLINNLSSEIEIYLACPQDRPYYDLWNESKKIKDIFILPH RKFSVKKLLGLNKFIKDNDIEIVHSHGKGAGIYSRILKILNQRLKIVHTLHGVHIGEYGF FKKSAYIFLERFLTLFTDKFINVSMNENSLCLKLKLFKKSKSEVVHNGVKALLKDDDAKI KFNLSGKRMVTTISRFDYAKNMSLAYEIAQNFKDNSDIVFLWLGDGDDRAKFESMAQKDG VNIIFTGFTDEVPAYLSATDIYLSTSRWEGLPYALIEAQSLGIPVVATNVVGNNEVVENG KSGFLFENAQQACRDIEILLNDEKIYGKMQSEALLNFKDKFDIGIAIRKVEKIYEQIFEN RSTRELQ >gi|257441660|gb|ACYG01000027.1| GENE 290 320486 - 321616 716 376 aa, chain - ## HITS:1 COG:CAC3066 KEGG:ns NR:ns ## COG: CAC3066 COG0438 # Protein_GI_number: 15896317 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 140 366 137 374 385 95 30.0 1e-19 MAVANYYTSPFQVGSHHYARAFEKLGYEVLFISNPISPIHKIFANSNELKERERIYKKGG ESAGSIFYYVPRSIFTPQNKPFLSSNFVLNNWQNFMYPNLLNFIKECGFGEVDILWFDSP LFGFLLDTITYKKSILRIADYSKGFNAVSDTQFKAEINIANKVDAVIYTAKNLKEKYNQI KDKSKMKYVPNGIDLDFFKEADRSLPQELEDIPEPRVIYVGAIHDWFDVDLVYYCAKNLP NYNFIIIGPEQKDLSLLKKLKNVHILGSVPYAKIPAFLYNSQVGIIPFNVKDYPDLVNSI NPLKMYEYLACGLKVVSVEWEQIKDMADYVYFAEDKEEFLSCISNKEERRPLDLEKMTWL GRLKELLAGSSLKKEK >gi|257441660|gb|ACYG01000027.1| GENE 291 321627 - 323717 1736 696 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_1535 NR:ns ## KEGG: NT01CX_1535 # Name: not_defined # Def: hypothetical protein # Organism: C.novyi # Pathway: not_defined # 8 694 4 723 724 582 45.0 1e-164 MSRISYYLKKARSMPFDELAIKIADKILNTAKNKFQKMCDVLGNTHINFNVSIIKTSYIN TKELDLSNIDPDVAKYLSKMYIEHKFDLLGSGWVKNSYDSAALGLEGYKYDMNVAAPASA PEDYEPIDWQKDFKSGFRWDEKKCYKDQRIAHKPGSDIKVPWELARFQHLPQLAIFAMAD PSLKEQNLKEFKNQILDFVHNNPPRMGVNWTCTMDVGIRVANMLAAYDMFRQMDEGGILD QNFKQTFSNSVYEHALHIVNNLEYSPHLTSNHYLSDIVGLLFACAYLDGGCETDAWLAFA VQEITCEMKKEFYEDGGNFESSTSYHRLSGELMAYSAALILGLKSEKILSLQNYDAKLWR KKPKLLPPDEQEFKILNGQISLPQWFVHRLYKIGRFTADITKPNGEVPQFGDNDSGRFFK FSPNGEFLSNEQAVRKYLNLSGFEGGDEPFWDENILNHSTLISCMGGIFDDEIFKNDMRF ERSFTRALAGRTLQVGDKAYRRPIASGVKFSELPHRKSIEFKIPNSQEIKNIFYPDSGIF IFKSDKFYLAICTTPLGQKGHGGHTHNDKLGYELWIDGLDIARDPGTYLYTPIPRRRNEF RSVGAHNVPIVGDLEQNSWGEGAIGLFGMFAECRCEVADFGENFISLAAEYKGVKIIRKF EIKEDKLEIIDMANREFYYSKFELYSNGYGKLMKNV >gi|257441660|gb|ACYG01000027.1| GENE 292 323710 - 324915 878 401 aa, chain - ## HITS:1 COG:all5194 KEGG:ns NR:ns ## COG: all5194 COG0438 # Protein_GI_number: 17232686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 85 395 94 374 386 128 27.0 2e-29 MKILYLRTLYWFGLKAGGSVGHTAGVINAMDKKVRLSVVSNDELWGVDKEITVVKPIKFP FIPKDVLEFFYNFKIIKHCSDLEADAIYQRYSGFSFCGAYIAKRKKIPFVLEFNSSDVWK IKNWKNNDALFKRIFKTIYYKIFKLPIVCAIESYNLKNAKCVVAVSEALKDILLNLGVDE GKIIVNPNGIDENKYNPQVSCEDVKQKYGLENKIVIGFIGTFGQWHGAENIALAFGGLLK KYPEYKNKAKLFMIGDGVRMSAVKKYILEFDLQENVVLTGLIPQEQGAKFLNACDILINA TVPNPDGSEFFGSPTKLFEYMAMGKAIICSNMAQMSEILEHGKTAYMVEPGNIDELEIAM KKLVDDGELRQRLGDSVRDEVVQKYTWDKHVDKILKAVGNE >gi|257441660|gb|ACYG01000027.1| GENE 293 324915 - 325883 718 322 aa, chain - ## HITS:1 COG:no KEGG:CLJ_B2942 NR:ns ## KEGG: CLJ_B2942 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_Ba4 # Pathway: not_defined # 41 242 36 228 441 116 37.0 1e-24 MKQILITCDTEVGELHANRADAFEIFIKGETDGKEVGVKLINDLANEYGGVAEHFIDVYP YERYGEDKFKRLCRQIVKSGHGVNLHTHPSGKYDKNRKFMRQYSLDEQIKIINFGKQKIK EWIGVDVIAHRAGGYGANDDTLRALRINDIFIDSSFFYKNINCAINYDYVNKTSKKCGVL QLPVSVYEKQKRYGFLKAKSVFQKFDFRYGSSADEILRAIDLMPKDCIITLFLHSFNFLN LKYNFKSGRYVDISINEGLIGEYKKLLEKIAGNKECKFTSIKDLNLSSLSYSDYMPKISV NAEILKPAMDKFRLKFMQIGDI >gi|257441660|gb|ACYG01000027.1| GENE 294 325883 - 326614 670 243 aa, chain - ## HITS:1 COG:no KEGG:Desac_1658 NR:ns ## KEGG: Desac_1658 # Name: not_defined # Def: Methyltransferase type 12 # Organism: D.acetoxidans_DSM11109 # Pathway: not_defined # 41 241 41 242 242 91 30.0 3e-17 MTTQEKILDRYKEIRGDFIDTKDEKLRQEFFDNLLKYNYLKFINPYINGKILEIGCNKGY MLKALQGLGFKNLHGIDLSNSDLSIAKNRTGLDTLKQENAFDNLKYNKYDLILCKDVMEH IQKDKQEEFVKGIYNSLNIGGTAIIQVPNMDWMMSNHERYMDFTHEIGYTRESLADIFRL YFAEVEVLPASYIFKNSKKKIVVSLVRSIMIKCIRFALRILGEGASDVWFEHREIMVVAK KDK >gi|257441660|gb|ACYG01000027.1| GENE 295 326617 - 327573 708 318 aa, chain - ## HITS:1 COG:no KEGG:Odosp_3034 NR:ns ## KEGG: Odosp_3034 # Name: not_defined # Def: hypothetical protein # Organism: O.splanchnicus # Pathway: not_defined # 123 288 112 275 321 98 36.0 4e-19 MEIRILAKDLIDPIEWNIDIKNPTQLFEFANTSGKFSIPYFLIIKDKDIIFKWQFFVVGF RYFRYINIISEPNIQTTELTNIAFKEILRVFNPFKVVFYSITLSKFTNMDFLELNNFNEI YRYGSSVLDLTQNEDVIFSNIHSKHRNVIKKAQKEDVEVFEDTSEQGIYDFYKIGVETYA RSNKEALEVEYLLKYFFALNKTGNIKIFFAKKDNVIQAGAIFLVSKHMSIYWHGASINNC ATGSSNLLQWEAIKYFKQNGTKIYDFGGCSDLDEKAKSISRFKGRFGGMTFNYIGFIKIN NILKNMLFIFIKNFTNKG >gi|257441660|gb|ACYG01000027.1| GENE 296 327563 - 328621 391 352 aa, chain - ## HITS:1 COG:VC0244 KEGG:ns NR:ns ## COG: VC0244 COG0399 # Protein_GI_number: 15640274 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Vibrio cholerae # 3 158 47 208 367 75 29.0 1e-13 MPKYKIYTSYARTAIYLALLSIGAKGKKVLLPAFICATTLPDAMVQAGGIPVFVDIDVHS LEMIQDDIKSKISSDTVAIISHHYYCAYMDYVVKIQDISKKYNLIHIEDRAHCYGLKKDL IGDAAIYSFSKNMISPGGGLIVTKDHKIWQECLSIQDKNKSIFHTFILNTEAFSYMEAIK NDRSCKGYKKWGLLKFIKMSASKLLKILGFYQKNYFYKITSNDIGKNFHIFDTRMTSEQL KYILIAIRKLRLAINTRKKVASRLNEILPSFLNVDNNIFTNYVIYSDELEKLEPIFGDLN IKTRRVWPYFQKYWHQQKTASVEELSKKLLLIDLDCFNEEKIGKLRGVLNGN >gi|257441660|gb|ACYG01000027.1| GENE 297 328608 - 329831 442 407 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_1534 NR:ns ## KEGG: NT01CX_1534 # Name: not_defined # Def: RfbX family O-antigen/teichoic acid exporter membrane protein # Organism: C.novyi # Pathway: not_defined # 17 391 13 379 409 104 23.0 8e-21 MLKKILGSKVAHQTLFLFTAQIFGMVVGFVSNMLLAKQMGAVDFGIYSLSLAIIIFISIF FEFGYFSSASKMLANNHDINLEKKIFGASIIIVCVIATLFLLFTLIVSFLMDIVFNDKVG HIIRLSSFISWSFVIPFFMELILKGSNHIGYLAGFNIFSKILFVVFLFILFIFERLNPLN ALLSFSLSYAFAFVIYGCILRPNFGGFSEILRTINLENKRYGIHVYIGRVIDVSTYNIDR LLIGYFIGAKDVGFYGLANSMATPINSLSNAMSSTMFKTLANSNKIPTAVLKANLAWVFL AFILANMLGNLIINFYLKEEYSDVSLLLLLMSIAVCFQALCQPYNAWISGHGYGKELKNA NIKMTIVTAASSVLLVPFMGAVGACISSLISNLYSLFLYVKIYYAKI >gi|257441660|gb|ACYG01000027.1| GENE 298 329824 - 330300 233 158 aa, chain - ## HITS:1 COG:Cj1435c KEGG:ns NR:ns ## COG: Cj1435c COG0560 # Protein_GI_number: 15792753 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Campylobacter jejuni # 18 144 74 200 211 94 39.0 6e-20 MQVFYGIEEETINKYCSEFYSKVILNRLHKCVIEALLYHKKERHIIAIVSGGFDIYLKYF ARDYGIDYLICTKLEFKSGIFVSKILGDECLGNGKLELLSKNLNLSDYDLLNSFCYSDSR SDLPLFSLVGNKVIVKNNQDISWANDSFQILEVDRKYA >gi|257441660|gb|ACYG01000027.1| GENE 299 330476 - 331561 421 361 aa, chain - ## HITS:1 COG:Cj1437c KEGG:ns NR:ns ## COG: Cj1437c COG0079 # Protein_GI_number: 15792755 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Campylobacter jejuni # 1 355 1 355 367 279 46.0 7e-75 MFENKYIAKLKPYKLASHKVWELNDDEILKLDWNEATIQPSPRVKETLIEFIKNGHINWY PDTNNTLLLKELSLYCDISVDNIQYFGSSDYLHEYIAKTFIQDNDKVLIVAPTYDNFRST MESCGGIVESFYLNKDFTFSNNLFCATLNKFEPKIVYICNPNNPTGTVYNNDLIEGLVAR FQNILFIIDEAYWEFTSITCKDLAKKYNNILICRTFSKAFALASFRIGYVISSAGNINMI SKIRNPKNITALSQIAAIAALQNKEYMKKYVKEVNDAKLFFDKGLRELGYNVFGIGGNFS LIKFQDKTSKNKFIEFLEMNKIFIRDYGHIPNMENCVRITIGTTRQMEKVLNIIRGLRIE K >gi|257441660|gb|ACYG01000027.1| GENE 300 331563 - 332840 654 425 aa, chain - ## HITS:1 COG:MA1063 KEGG:ns NR:ns ## COG: MA1063 COG1541 # Protein_GI_number: 20089933 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Methanosarcina acetivorans str.C2A # 30 423 33 442 445 166 31.0 8e-41 MTGQICKKIKSKIKNYIFIKRNFSEYDKFQWRSAEEIERIRTKKLKDIVKKAVDFVPFYK NLDLKIDFENFSLDELKKFPVINKQLIKENFKDFCSIKFNGKASHTSGSTGAPFEFKVPY ESDAIEKIVANRAWGMGKDYAYKSGDPIIVLRTYSPKAGEPLYKISGDYWYLSPFHINES NLALYLSVIKKSKAKIIRGYASSIYIFTLLLKQKNIKIPQIKTIVTSSETLLPAYRSAIE EYWGLSVLDWYGQNERTVTVQQCWAGNYHNNDDYGIIELSDKNEIIATSLNNYVMPFIRY NTGDKAIPLDGKAPICPCGRHLSIPFKGIEGRSDDILIKDDGTKVPSINIYTIMHELEFI KQFQIIQFKNTDIVINAIGNLDDVKELLLCDNIRNRLGNVAIKINVVDEIERDLSTGKIK TIIRK >gi|257441660|gb|ACYG01000027.1| GENE 301 332853 - 334979 2311 708 aa, chain - ## HITS:1 COG:RSp1011_1 KEGG:ns NR:ns ## COG: RSp1011_1 COG1063 # Protein_GI_number: 17549232 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Ralstonia solanacearum # 15 370 17 367 397 301 43.0 2e-81 MIQAIVKKGKVLAEQIPAPSVSKGCVLIKVVNSCISAGTEISGVSNSGKSLIKRALEQPE NVKKVINMIKSDGIANAYAKVKGKLDSGSPTGYSLSGVVIAVGEGVLNFKIGDRVTAAGA GLANHAEYVDVPKNLVMKMPQNMDFERACTVTLGGIAMQGVRRIDLRLGETCVVVGAGIL GLLAVQMLKISGVRVAVSDFDDRRLQIAKEYGAELVINPSRDDLLGVVSSWSGGYGADGV LFTAATSSSEPLSQSFQMCKKKGRVVLVGVAGMQINREDMYKKELDFLISTSYGPGRYDK SYEEGGLDYPFSYVRWTENRNMSEYLRLVNENLIKLDKLIDAKYPIEQVTEAFESLQTSQ NKPLMVLLDYGEANLTELDNYLNHDKKIIISSAPVNRDVINVAFVGVGGFATGMHLPNIS KLMDKYKIYAIMNRSGHKAKAVAQQYGANYATSNLDDILNDKNVDLVIISTRHDSHAELT LKALEAGKNVFVEKPLATNKDELEKIKKFYEVGGDKPVLFVGFNRRFSAYAQEIKKHTSA RINPMIIRYRMNAGYIPMDHWVHENGGRMVGEACHIIDLMTALTGSEIQSVFSQSITPSN EKYSAEDNKSIVLKYKDGSVANIEYFANGSKELSKEFMEIHFDGKSIVLDDYKSLKGYGV RVKEISTNVSQKGQLEELEVLFETLKKGKGWPIELWDMVQTTEISFLI >gi|257441660|gb|ACYG01000027.1| GENE 302 335000 - 336199 1007 399 aa, chain - ## HITS:1 COG:VC0918 KEGG:ns NR:ns ## COG: VC0918 COG0677 # Protein_GI_number: 15640934 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Vibrio cholerae # 3 381 4 394 413 423 55.0 1e-118 MKKVCILGLGYIGLPTAALLANRGYKIHGVDVVQSVVDTINEGKIHIVEQGLGELVKKSV ESGNLKADVKPDFADVFIIAVPTPFRDGYVPNIDYVISAAKSIIPYVKDDNMVVLESTSP VGTTEKIGEILKNGGIDISKIYIAHCPERVLPGKILKELTQNDRIVGGTTKIATKKIAEF YAEFVEGEILQTDSKTAEMSKLTENSFRDVNIAFANELSILCDKFGINVWELISLANRHP RVNILNPGCGVGGHCIAVDPWFIVHAGGYEARLIKSAREVNDHKAEWCIEKIKNAALKFE LQNGKKPKVACMGLAFKPDIDDLRESPALNITRRLIADGVDVVAVEPNIKAHKDFEIADY KKAIEISDIIVFLVGHKEFKGLKIEKEVLDFCGVRNTNI >gi|257441660|gb|ACYG01000027.1| GENE 303 336196 - 337332 890 378 aa, chain - ## HITS:1 COG:STM3920 KEGG:ns NR:ns ## COG: STM3920 COG0381 # Protein_GI_number: 16767195 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Salmonella typhimurium LT2 # 5 375 2 370 376 453 57.0 1e-127 MTKRKILIVFGTRPEAIKMALLIKEFQKHAEFEVKVCVTAQHRQMLDQVLEFFEIKPDFD LNLMKQGQDLYDITSGVLLGMRNVFSKYSPDIVFVHGDTTTTYAVSLAAYYQKIDVAHVE AGLRTHNIYSPFPEEINRQMTGLIAKYHFAPTADARDNLLKEGKDSRNIVVSGNTVIDAL LWTIDKIENDELLKNKILSFINSKYKLSDRKFILVTGHRRENFGEGFVNICEALREIALK NENIDIVYPVHLNPNVRKPVGEILSGIPNIFLIDPLEYDSFVYLMSKSYMIVTDSGGIQE EAPSLCKPVLVIRETTERPEGIRAGCVKLIGTKRENIIKEVQKLLNLKDEYDKMSKSVSP YGDGKACKKILEFLKGIL >gi|257441660|gb|ACYG01000027.1| GENE 304 337398 - 339440 836 680 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460746|ref|ZP_05625847.1| ## NR: gi|257460746|ref|ZP_05625847.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 680 1 680 680 1129 100.0 0 MNNAIKYAINFFVALLVVVQVIFFVYGIFTDFKLINEFKNIDEETLVGDKFVKNSEYIKQ NLIFEPLKSSMYQYNSYNDIVSKCKSISSGCKYSVIHGDAHNSQFATLYNRDYNITMFDA LINPSSNSSANAIVNTLMNYNDRTKNQDTGAWDAYPLFWADSLDKLQEKVDFIANNLYEQ QTQLINRYFWHEAPFMLNAVNELNLGRDKSEIFSQYGFLSAYTVKFIMQSLGGINVENFD KAKNIINLIYYIISIVFIILFTKNYFIRFIFIILFSIYFFSIGFHSYHFAPTHVYIRHFF DILIALMLFWSMEFKELRLYYVAIVFALGILSILLVKDFGLFLFLSIVGTFIIKYVLEFI ERRRVDLKELWIFIIFILFSIIACIKYPLMDNPSTKYFLDGFYSLPISMPIYMLLLFAIS LLWLGLIWFYVELKRSNYLLSYIFLLFYTEFLCVFFVWKGNFDNINFAIITLPMLILFHF IVKRVRDILYIIIVPILIFAYAKYCYEYISQMTLYENTFATHRNYKWDHERAGGIITTYS FERFDDALRLINKYSKNSNELYMISKYDNMLQFFSKKYSGLKYFELKSFIVTDNEYNEVL DLINSKADILYVDTDIFNVYYKELKERRFFDVYNNQWLPNDVMRRIIQLKILLNLFDDVR DKYELVEHGKLIDVYKRKKE >gi|257441660|gb|ACYG01000027.1| GENE 305 339681 - 341714 535 677 aa, chain - ## HITS:1 COG:no KEGG:Pnec_0344 NR:ns ## KEGG: Pnec_0344 # Name: not_defined # Def: hypothetical protein # Organism: P.necessarius # Pathway: not_defined # 11 551 13 603 627 93 22.0 3e-17 MNDIRLEKFIIALSLITVLILHLLIFNHYFSLQEGWWETYAYLVNKGEVINKDFYLAWTP LFVYINAFYQKIFGINFFAFACIGVVAAMIQVILLYLVLREFFSRVSSILGATFASFLWF GMETYIAKDYHTYVFIIEFSTLLFLVKSIKNENSKKGIIYQILGILFLVLLFFIKQNVGL VLFASLFVSYAFISSNVKDYLKRIGFLLLFTAIFFASINFIMPFDLSSITDNDSKGSLWT IATRFIFEPLLFKNLIVAFTIFIFILVLKRYFDCICCIYDKTMMKIMHDVASPIRFAMVG AIFIVLGYFIIHFTSKHIYIGFSISIILFIITMVFIIKNAKIYKSKEYKFMTLAITAIVY SGTLTSYALDMNTILLCLSFAFAYILNQNLRNFVRAIFLFWMLFIMALIFYSKLLNPYNW LENYQPSIFRADSEASYPQLKGIKMDKKISEILDFFHEYVGKKSKSDKDFYFFNFPIMYL LNDKIPPYKLMTQWFDVVPTKLANKEYEDFINNPSDNVVLYQYSALAFDVHKRFLQKDHF MQEEFHKTMNEWVKEGKYKFIRSFIVPSYLEYAPRYQNGAIKMEVIIQNSALIVENYKKL KIWLDANGIILEKVKRDGANIYSSDDLDDVSQSISIGDVVVIEGPIKYVFAIFPQIGVMP IDRSGRLNSINIYERIK >gi|257441660|gb|ACYG01000027.1| GENE 306 341717 - 343774 604 685 aa, chain - ## HITS:1 COG:no KEGG:Pnec_0344 NR:ns ## KEGG: Pnec_0344 # Name: not_defined # Def: hypothetical protein # Organism: P.necessarius # Pathway: not_defined # 29 565 30 609 627 85 22.0 7e-15 MFNTKILENLMVAFCFCITLALHLLIFNHYFSLQEGWWETYAYLVNRGEVINKDFYLAWT PLFVYINAFYQKIFGINFFAFACIGVVAAMIQVILLYAVLREFFSKVSSAVAAIFASLLW IVGGSYIAKDYHTYVFIIEFSTLLFLVRSIKNENSKKGIIYQILGILFLVLLFFIKQNVG LVLFASLFVSYAFISSSVKDYLKRIGFLLLFTIIFFASINFIMPFDPSSIIDNDSKGSLW TIATRFWTNNVNFETLLNGFYVFCIILILFYLRNYIKDFYAKILLKIISVTTKEFRIFIL ILIYIFPIYGFIYIINNFGISMYRFISAAIGLILFIMYAFFIKNNRFYNSQKYVFITLSM TAISYAGTFADLFTANSNMICIAFLCAFIINYTRIKHIKNILVCFLLISIYFNIESVLYT PYQWNYNYQTNVFNARTQSTYPQLKGIYMDERTANIYNYFMIYVNEKSKSKDDFYFFNLP IMYLLNNKIPPYRLVTHWFDVSSSKAIEEEYNEFIKSPTRNIVMYQYQTYFSLAHKRFQG KSSFKQADFYEIMNKWVKEGKYKFIGSIIVPYDDASLEEEKNHILKNLLIILQNDKFFGM SRDEFTNWLKDNGITLTYVKHEEVKADDQNPKQLDENKQDLMQNGDILQMDGSVADLSRI FPQLGVAPIESTFFNTINIYERQED >gi|257441660|gb|ACYG01000027.1| GENE 307 343777 - 344475 717 232 aa, chain - ## HITS:1 COG:Cj1083c KEGG:ns NR:ns ## COG: Cj1083c COG2231 # Protein_GI_number: 15792408 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein related to Endonuclease III # Organism: Campylobacter jejuni # 1 231 1 228 228 147 40.0 1e-35 MSATELFIALFRAVEIKDFRWWPEFGSFEVVVGAILIQNTAWRNADAALQNLRSKGLLSL DGIAGLDKAELAEIIKVSGFYNQKARRLSLLCKAIIADFGDFESFKAGVSREWLLARKGI GAESCDAILCYACERAVMVADSYSARLLEALDYEFESYDELSAWLSELEFERIYELVNSA NLPCDAVAKVDKLENENGAYALFHGLIVEFCKAHLKGKIFDESAKIILNDLR >gi|257441660|gb|ACYG01000027.1| GENE 308 344594 - 345577 873 327 aa, chain - ## HITS:1 COG:Cj1084c KEGG:ns NR:ns ## COG: Cj1084c COG2607 # Protein_GI_number: 15792409 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Campylobacter jejuni # 55 318 1 252 253 283 55.0 5e-76 MRTCDENIKKSASKSRSEELNLAAASGLNLAPQAVLKSAQSDASEQIYFSDFSAIDWRTA QVAVFRASKKALKIVRDIDFTDLDALVGLESQKSALIKNTGAFLRDCSANHVLLWGESGC GKSSLAKAVFSKFIPQGLKIIEIGRDDLGYLVDIIDAIRERNFKFIIFCDDLSFELGESG YKHLKPLLEGSLERAPRNVLMYATSNRRHIVGECTSDNDAAQISRGELHLSDAANERISL SERFGLQLSFYGGSMREYLGIVDAYFAAAQGMSAAEFRLSFAANLDALHAKAREFAMLRA SRSGRAAKQFFLSFGEEFFANLKGGDR >gi|257441660|gb|ACYG01000027.1| GENE 309 345561 - 348521 3135 986 aa, chain - ## HITS:1 COG:Cj1085c KEGG:ns NR:ns ## COG: Cj1085c COG1197 # Protein_GI_number: 15792410 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Campylobacter jejuni # 1 978 1 977 978 999 56.0 0 MQAEVYEYFLQNQKELLICEDDKEAAACEQVLKFMGYAAFCLPDFRASFGEDLRSYMGEL AGISTALSAFYKASGKKILISPVRTILNKLPAASHLRPLNIKFGSELNLGGLKEEILRLG YDVRDIVESVGEVSFRGEIVDIFSVGSESAVRILLEGETVESIRRFDVATQKSEKDELAQ AEIAPFLANLSEDEFESVSEKISRADSDALARDLGSLGFWFIDGFVDYAEAFDCVLLHEI KKDEIFSERNLDFLDAIEVLPAARKFKDLTVTPSQEFFEFHRSEAITLIARNDALLAPFD LGGFSNIEILREDFVVNLISAERIILSLNKAAPKKRVRRSSLALDELNVGDFVVHEDHGI AKFNGLELIEVMGHSKEFVSLLYEGGDKLLLPVEYLNKIDRYVASGGAVSLDHLGRASFS KIKERVREKLFAIASNIIALAAKRELVRGLVIKNESADYAKFLSASGFSYTSDQQKAVGA ILADLQSGKVMDRLLSGDVGFGKTEVAMNAIFACIRSGHSVLFFVPTTLLSSQHYATLSE RFREFEIPVFKLDRFSSARQKSEILKRLQSGEAIVVVGTHSLLNLNPANLGLIIIDEEHK FGVKQKERLKEKSAASHLLSMSATPIPRSLNMALSSIKSYSTLLSPPQDRLDVRTFVKQW DEKIVKEAISRELRRGGQIFYVHNHIATMQSAKKKLLEILPSLKILILHSKIDAKTTEDE ILKFVAGGYDLLLCTSIVESGIHMPRVNTIIVENADKFGIADLHQLRGRVGRSNKQGFCY FLIEDKTALTQDALKRLVALESNSFLGSGSVLAYHDLEIRGGGNLLGEAQSGHIEAIGYS LYLKMLEEEIGKLLSRKSAAASVELKISVNAFLNSEFIREDRLRLDLYRRLSKCAEASEV LEIFGEIEDRFGRADIYTKQFIDVMMIKVLATKLGLRVISSMDENILITLANGDKVRLKA QTRDDDDVINEILIYLRRELKNANLR >gi|257441660|gb|ACYG01000027.1| GENE 310 348521 - 349414 896 297 aa, chain - ## HITS:1 COG:Cj1087c KEGG:ns NR:ns ## COG: Cj1087c COG0739 # Protein_GI_number: 15792412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 3 292 5 291 300 176 35.0 6e-44 MAKTKLTLSDHFGTKTLYFGENFRFQLKILSAFFVIFLLVLFFAIFKLASDRSNLKELNK TLYAENLALKEQNIALEGKNEEVLAKLDGREDDGGGLDSDIQVMLAMNEMKKERKKGSGA HIAASEKTASAILSAVPNGLPMQYRGVTSPFGMRTHPISGVMRMHHGIDLRASEGTPVFA TAEGFVQFAGGSGSGYGILVILSHNYGFETRYGHLSSAVVTPGSWVKKGDLIGYSGNTGY STGPHLHYEVRFLAQSVDPANFMSWNAQNFKNISTLEPNVSWQEIANVVQHQIERFK >gi|257441660|gb|ACYG01000027.1| GENE 311 349407 - 350984 1353 525 aa, chain - ## HITS:1 COG:Cj1088c KEGG:ns NR:ns ## COG: Cj1088c COG0285 # Protein_GI_number: 15792413 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Campylobacter jejuni # 218 517 92 387 394 206 40.0 7e-53 MSGRSIKEFLQNRPIYYKKIDYERFPRAYAAIKDKIPLKNVIQIIGTNGKGSTGRFLANA IAAAGFSVGHYTSPHVFKLNERIYLGGRIAQSPVFALNSGASNFKNEQNSASASNFTEKQ NSAKMQNFANRENSASQISISNLQNSATQNLHSEQNSALQSFVSTTRNFCSEHNFIARNS IDTQNYASTQNLWNSQDLKSPSEQNFKSAQSSLPISLGRDATDEELDFAHEFLQESLPAE FKDSLSYFEYLTLAAAVIFKDCDYCVIEAGMGGEFDATSSFGRTLSLFTPIGTDHLGMLG QNLEQIAHTKLITMDKEAILSDEMSEVPLRIAQQIAEQKGTHLRFATELLSKSEQAQIAE FCAHNNLPKFQISNLALALAAMKFLNLKFEISQLPPLNLRGRMEVLAPNLRVDVGHNELA AQQVAREITEIYGGKKIVLIYNAFADKDVAAVLRTLAPVVERVEIFNYEVADREMAAEAI TRALDALKIPHSPFRGELRADEEYLVFGSFHLVENFILWLEARRG >gi|257441660|gb|ACYG01000027.1| GENE 312 350965 - 351504 623 179 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0472 NR:ns ## KEGG: CHAB381_0472 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 173 1 173 174 233 65.0 3e-60 MRKALTVFCLIFLIGCGYKPVSRIAKETMSGSVFVDVMMSKTDPQNTVAIKDAIRQGIVQ RLGMSLSDKNSAQTIVVASIKSLSFSELSYDQFGYVTSYRANLIVNFSTKLKNGEVFSKD CVGDYDFKVSRLVKNSYDTSSIISDKDRYKAIENASAQAFDEFISALAIRGFRLERAQH >gi|257441660|gb|ACYG01000027.1| GENE 313 351511 - 353958 2820 815 aa, chain - ## HITS:1 COG:Cj1091c KEGG:ns NR:ns ## COG: Cj1091c COG0495 # Protein_GI_number: 15792416 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 815 1 809 809 1182 70.0 0 MPYDSKSIELKWQKIWDEEGVFEPKDDYSLPKKYILSMFPYPSGRIHMGHVRNYSIGDAL SRYYRLRGYNVLQPIGFDSFGMPAENAAIKHGIHPKTWTYENIDYMKNELHRLGFSFSAR RMLATSDPLYTRWEQEFFIKLFEKGLIYRKSAVVNWCEHDQTVLANEQVEEGRCWRCGNE VVQKQMPGYYLKITAYAQELLDCLKQLEGKWPAQVLTMQENWIGRSEGLEFSFKFDEQSS AKLGGIEGFRVFTTRPDTIYGMSYAALAPEHEVVKRLLDNNLLGAEAAAKVREILNQSPR ERQASDKDGVSLGISVLHPLSGKKIPVWTANFVLAEYGGGAVMAVPAHDERDFEFAKKFN LPIIQSIAPKSGDYDASKAYVESGVLINSAEFSGMDSEKAKSAVISKFEELGLGRRVVNF KLRDWGVSRQRYWGAPIPMIHCPKCGLVSEEISNLPVELPQDVKITGKGNPLDAHPSWKF CKCPKCGGDGVRETDTLDTFFESSWYFARYASDERTWQQRAFDEQSVNYWMNVDQYIGGI EHAILHLLYARFFQKALRDIGYLRDSEPFERLLTQGMVLKDGAKMSKSKGNTVDPDDIIE TYGADTARLFMLFAAPPQKELEWNDSAVEGAYKFLSRLYDRAENAYATDKIPQIDHAALN KEEKYARLKVYEALKKSQQVYESSFAFNTLIAACMEALNALNAQSNKDVFTEGYFVILCL LEPIVPHICAELSERLFKRQNFGELRVCEEVFESDTIKLAVTINGKKRAEFEAGASLSEG EILSLAKQNCAKWLEGKSIVKEIYVKNKLVNLVIK >gi|257441660|gb|ACYG01000027.1| GENE 314 353968 - 354309 447 113 aa, chain - ## HITS:1 COG:no KEGG:Cla_1046 NR:ns ## KEGG: Cla_1046 # Name: not_defined # Def: hypothetical protein # Organism: C.lari # Pathway: not_defined # 1 112 1 112 113 124 67.0 1e-27 MNWGRVIYIFFALMSMTTIGGFLYEKNEILLFIATSVNAVSTLLKVGVRNMLAAELFASS LVADLHLIPAFVLIVVAPGDLSIVTSLAIGALLANFFSLILIAIESAKTKDEF >gi|257441660|gb|ACYG01000027.1| GENE 315 354319 - 355287 1124 322 aa, chain - ## HITS:1 COG:Cj1092c KEGG:ns NR:ns ## COG: Cj1092c COG0341 # Protein_GI_number: 15792417 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Campylobacter jejuni # 1 322 1 323 323 342 53.0 6e-94 MQVFDKGKIYDFMKFRYFTFTLSAVLIIGSIALFFIKGVSYGIDFSGGTLIQVKYDVKAP LDEIRKRFEAANLGNINVTEFGSDQEVTIRYSGAASELGDNPALAAQKILQGSGNFDIRK VDIVGPKVGEELRTNGILAVCVSFALILVYITLRFEWRFAVAAVLSDLHDVVVAVGAMIL AGVDFNLEILAALLTIMGYSLNDTIVVFDRIREGVKDSKSIKLDEVINESISHTLSRTLL TSLTTLIVIVILFVWGGEMIHGFSFVMLIGVVAGTFSSVFVAAPMLILFKFNVEKYRAFL AEKQRRIKEKEKNRAMYEKGTV >gi|257441660|gb|ACYG01000027.1| GENE 316 355274 - 356875 1858 533 aa, chain - ## HITS:1 COG:Cj1093c KEGG:ns NR:ns ## COG: Cj1093c COG0342 # Protein_GI_number: 15792418 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Campylobacter jejuni # 2 526 3 526 526 596 63.0 1e-170 MSSKISYRLLIFLAAVIFSAIFAAPSIFQTEKGSKINLGLDLQGGLHMLLEVQSDEAVVS KIKSIAASVNYAAKRDDLLMDGLKLEGDSFEFEILDADEASKFDAILHSAASGLDIQKSG EKYRVTLTPEEVEATKKYAIEQAVETIRNRLDQFGLAEPTVAKQGESYILVELPGVKSAA DEQRAKDLIAKAAHLQLMAVDDVRQDRAQTISAADARAYGDVIYPDVKNPNYKYLINEIP VLDGAMLVDAKVAFDQHTNQPIINFTLNSQGAQIFGDFTGKNVGKRLAIVLDGKVYSAPR INERIGGGSGQISGGFNVEEAHDVAIALRSGALLAPVKVSETRSIGPSLGQDSIDKSMAA LSLAAVAILIFMIFYYGVAGLFADIALVVNILFLIACMALFGATLTLPGMAGIVLTIGMA VDANVIINERVREVLRTGVSIRQSINKGYENAMSAIVDSNITTLITSAALYAYGTGPVKG FAVTMSIGIVASMITAILGTHGMFELVMDKMEKSKNTALWLGYKVRGGANASV >gi|257441660|gb|ACYG01000027.1| GENE 317 356865 - 357137 402 90 aa, chain - ## HITS:1 COG:Cj1094c KEGG:ns NR:ns ## COG: Cj1094c COG1862 # Protein_GI_number: 15792419 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Campylobacter jejuni # 1 88 1 89 90 99 57.0 2e-21 MEQGNFFASILPIVVIFAIMYFLIIRPQQKQAKDHKAMVDALGKGDKIITSGGIKCTVVK TNNDFITVKLNDEVMVELDKQFVARKLDEQ >gi|257441660|gb|ACYG01000027.1| GENE 318 357113 - 358456 1122 447 aa, chain + ## HITS:1 COG:Cj1095 KEGG:ns NR:ns ## COG: Cj1095 COG0815 # Protein_GI_number: 15792420 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Campylobacter jejuni # 6 437 7 424 441 230 35.0 4e-60 MQRSFLVPCVSFIRNLKSSYFTLSYINKGFVLALALSNFIFVEILSSKFDGLGALAAEFF SPLIAIAALFYLLKASKAEWFWCGFFIGALWMHWISFSLIYFDLAFLIPIEILGICLVYA FIFRIFVIFDAPVLRAACLLILKFIHPFGFDWLNFELLLSHGIFRADLSALALILAGLCT VLYLRGRGARAKLNATIFAVFLICALQFSQKEPEPLPIKISLANTDISQHDIWAKDKILS AALANLARIDEAIAEGQDAIILPESAFAMPLNLENALVEALKEKSRAITIVAGAEAYEDG KFYNSAYLFANGEMKRFDKHILVPFGEMVPLPEFARNFINRVLLGGATDFSTASGFSDYE LGGRSVRSAVCYEATRAELYEGSPKYVVAISNNGWFVPSYEPYLQRLIIRYYASLHGTLV YHAVNGSASEIIAPKKIWINRLKDHLK >gi|257441660|gb|ACYG01000027.1| GENE 319 358521 - 359240 964 239 aa, chain + ## HITS:1 COG:Cj1274c KEGG:ns NR:ns ## COG: Cj1274c COG0528 # Protein_GI_number: 15792598 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Campylobacter jejuni # 1 239 1 238 239 310 73.0 2e-84 MAKYNRILVKFSGEALAGENGFGIDSEILKFIAKEIKQLVEGGIEVGIVIGGGNIIRGVS AAASGIIKRTSGDHMGMLATVINAIAMREALEYAGMDVRVQSAIKMEAICETFIIGRAKR HLEKGRVVIFAAGTGNPFFTTDTAGTLRAIEIGADAIIKATKVMGIYDKDPQKFKDAKLL SKVTYDQALHDNIRVMDDTAIALAKDNALPIIVCNMFKSGNLYKIVDGGDLSSCSIVKN >gi|257441660|gb|ACYG01000027.1| GENE 320 359264 - 359482 313 72 aa, chain + ## HITS:1 COG:Cj1273c KEGG:ns NR:ns ## COG: Cj1273c COG1758 # Protein_GI_number: 15792597 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Campylobacter jejuni # 2 72 4 73 74 66 53.0 1e-11 MRTEQIVAKALKVTGGDRYKLSLMISKRAEQLAAGEPPLIDNVDTRRMKFADIAILELAE GKIALDGIVDKD >gi|257441660|gb|ACYG01000027.1| GENE 321 359460 - 361652 2533 730 aa, chain + ## HITS:1 COG:Cj1272c KEGG:ns NR:ns ## COG: Cj1272c COG0317 # Protein_GI_number: 15792596 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Campylobacter jejuni # 11 729 9 729 731 862 59.0 0 MESLTRINDNFLESLIDDVVDTKDIQSAKQLLYNLKEPTPLLVDAINLCIAQHDGQFRKS GEPYAIHPILVACFVSFMGGDDAMVISALLHDVVEDTDYSIEQVRQRFGDEVAKIVEGLT KIVNIREDKLAPSGDSNAKLRTTALTFRRMLMISINDQRVLVVKLCDRLHNMLTLDALRP DKQKRIGEETLLVYAPIAHKLGISSIKNVLEDLSFKYVMPKEYSAIADYVEEHKQQLQMS LSKFSEKIKEYMLSNGFSEGSFEIQKRMKHYYSIFLKMQRKGISIEEVLDLLAIRIIVQK PMDCYLALGIIHTKFNPLISRFKDYIALPKQNGYQTIHTTVFNESMIVEVQIRTFDMHNT AEFGVAAHWKYKYSGSINPKLDWLNDIGMQEEDDANAEDLYEYAKDSLYVEDIAVYSPKG GIFTLPRGATALDYAYEIHSQVGLKATEAFINRVKVPLLTELKNGDIVHIITGSEPHYRC SWLSSVKTGKARATIKAFCKQKIRDINFEVAIKILCAIFTTSKESILSWLEKENLSKKID KAAYDSVFLKDVVNALKKYPLKEKFFNMKFRSKYEIEKQKFDNIVVYSNFKIDEVEFDYC CNPKRGDDIIGFRNGHGVTVHHKLCERASELIKTDEMIFVKWTRNAPHRYKIILNLENKR GSLATFLNYLVKLEIDLVSISLNENSETTSDYFEIIIELNENLDSTEIKDKLKNRFKIVD FVSLTDVYKN >gi|257441660|gb|ACYG01000027.1| GENE 322 361667 - 362872 264 401 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 42 401 41 417 418 106 26 2e-21 MADIQGIMENFKRGVAEIIGEEQIEALIRRYYDSGEVFYVKVGMDPTAADLHLGHAVVLN KLAFLQNHGAIVQFLIGDFTAQIGDPTGKSETRKKLAREIVLQNAKTYEQQVFKILNPAK TKVMFNSEWTNRLGASGMIELSSTFNVARMLERDDFEKRYKAEQPISISEFMYPLLQGYD SVCMKCDIEFGGTDQKFNLLMGRQLQRIYDIGKEQSVVMMPLLVGTDGTNKMSKSLGNYI GVTDTPHDMYGKVMSISDALMWDWYNLLSQKSSEDIELIKGFVADGSIHPKAVKEELASE IVTQFYDENTAFEAKQEFDRVHGAGELPSEIKEYHVSSPAWIVKALISCKLAVSSSDARR LIKSNAVSIDQNKILDEQLQLSSGEYTLQVGKKKFAKLKVD >gi|257441660|gb|ACYG01000027.1| GENE 323 362872 - 363960 1267 362 aa, chain + ## HITS:1 COG:Cj1270c KEGG:ns NR:ns ## COG: Cj1270c COG2070 # Protein_GI_number: 15792594 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Campylobacter jejuni # 3 360 6 363 363 543 70.0 1e-154 MSIKIGKHEIAHPIIQGGMGLGISWDNLAGNVSLNGCLGVISSVGTGYYENLKFAKKSLD GRPYQSENFYSKEALFAIVQNARKICGDAPLGMNVMCAANDYEHIVRDTCEAGIDIIISG AGLPTNLPEFTADFPDVALVPIVSSAKALKIIAKRWKQRYDRIPDAVVLEGPLSGGHQGF TYEQCGDPAFALDNLIPQVKAEIAQWGSFPLFVAGGIWDKTDIDRVKSLGADGVQMGTRF IGTFECDAAEEFKQVLLNAKKEDIQLLKSPVGYPARGIHTNLQDMIAAGSAPKIRCISNC VSPCERGKGANAVGYCIADRLSDAYLGKTQSGLFFTGANGWRLNEIISVKELIEKLVNGE DS >gi|257441660|gb|ACYG01000027.1| GENE 324 363944 - 365860 1745 638 aa, chain + ## HITS:1 COG:Cj1269c_2 KEGG:ns NR:ns ## COG: Cj1269c_2 COG0860 # Protein_GI_number: 15792593 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Campylobacter jejuni # 293 638 13 329 329 282 50.0 1e-75 MAKIVKIFLIAAFSCVLAFGASSEAFFAKFDKDFIVATPNYKRSLHKELKSLYQGASDKE VRIKALKRLVYSSKNLGLDSSAYEKELARINTKDADKTKSKSSSDESKQSSSSAEKKSSK NSKKTSSASNEDSQASSSSKTKSTKSKKSSEAENSKSSSNLADKNPKASASENSKASTSK NSSAKKTQAAKNADLSSLSKEDLEFLRSTRPIGADEAVDSQEDDGGEDAIAQNEDEEEAA DQSSELRKSSVKKADKNAQLALNSLRGDKNEIVLEFNRDLSQSDYKDFTIASNDHFRFVI DFSARQKSQKTRLKDSFVSDVRVSQYNDKTVRIVLSDPKEFNANVEINGNMMILSTAEGL KAAKSARAEKNKDQKSGRKRGREQDSEPQVSTIDETQGAKTVSVAAGKIYKSTKGKLIVI DPGHGGSDSGAVGNGLKEKNVVLATSKKLGALLTKRGYKVLYTRSTDVFINLRSRTAFAA KKNADMFISIHANAAPNASSALKMSGVETFFLSPARSERSKNAAALENRGDLEDMNTFSK QTFLNFLNREKIISSNKLAIDIQSYMLSSVKKSFSSKDGGVREAPFWVLVGATMPAVLVE IGYITHPQEGKNLGKSAYQDRIAQGIANGVDAYFQKNK >gi|257441660|gb|ACYG01000027.1| GENE 325 366528 - 367148 728 206 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460771|ref|ZP_05625872.1| ## NR: gi|257460771|ref|ZP_05625872.1| hypothetical protein CAMGR0001_1540 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1540 [Campylobacter gracilis RM3268] # 1 206 1 206 206 338 100.0 2e-91 MKKIVFLILLFAAVALALYVTSRVNPSLFAEIKVLGALLNATIFGVALIALAIGEKDVVR FPFLTASLLALFSGLVEGVLLFENRYYIAITAVAFVAFVFYLQIRHKRFSNKIYKNSADA GSKNLDGNESENFKESGEISNSQNEDEILNSSGDLDENFASGADENSDENFKILNDGTDE GDESKNSAQNFNQGGENSVPDARRDR >gi|257441660|gb|ACYG01000027.1| GENE 326 367145 - 367471 321 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460772|ref|ZP_05625873.1| ## NR: gi|257460772|ref|ZP_05625873.1| hypothetical protein CAMGR0001_1541 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1541 [Campylobacter gracilis RM3268] # 1 108 1 108 108 120 100.0 4e-26 MIKSALIALAVIFLLLLNLANLFGMIGISGPVPAMIWFAISFCGVFYLYKFCGAKPVAAR IGIFAVAFVGGFFTSVLYYGFFNSQTLEFAFTYAFFAVVFTLGIGVIL >gi|257441660|gb|ACYG01000027.1| GENE 327 367576 - 368682 1172 368 aa, chain - ## HITS:1 COG:Cj1282 KEGG:ns NR:ns ## COG: Cj1282 COG0772 # Protein_GI_number: 15792605 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Campylobacter jejuni # 1 356 1 357 366 416 66.0 1e-116 MFKIDKKILAYFDFIQPFLIVPIVVFSYVLISEANDVLSSKQVVYFGVGFAVFTLFFLFP IRKFLYLIPIFYWTNIILLLSVDFFGVSKLGARRWLEIPFVHFTLQPSEVMKPAFILMLM YLIHKNPPPKNGYGLKDFLRLSFYILLPFVLIAKEPDLGTAAILFLTGFAILFIIGVDKK IWLTLIIVFVASSPILYENMHDYQKKRIADFISEEPNYQVKQAIIAIGNGGIYGKDKDEA TQTHFKFLPIATSDFIFAYTIERFGFVGAAALIALYALLILHLLSLNYDFKSDYLIRVFT SALASLIFIYTGVNISMVVGFAPVVGVPLPFFSYGGSSFITFMILFGILQNLLTFRMKDN YKTYKIRM >gi|257441660|gb|ACYG01000027.1| GENE 328 368735 - 370222 1143 495 aa, chain + ## HITS:1 COG:Cj1280c KEGG:ns NR:ns ## COG: Cj1280c COG0564 # Protein_GI_number: 15792604 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Campylobacter jejuni # 1 218 1 223 322 201 48.0 2e-51 MDNLIAQCSERLDVFLSSQLGISRNQISNLIKSAAVRVNGAVQTKPGYKLSAGELVRIDY PASAPQQTSAERLNFDVEILYEDDDLLVVNKPAGLTVHPAASVKEPTLVDWLKSRGYLLS TLGGELRAGIVHRLDKLTSGALLVAKNNAAHAALSAQLSDKSMGRIYLALIDLPLKEPCV IERPISRNPANRLKMGIVPGGRSAKSAFYEILSGAELTELQNSAERCDEILGAGDGTAAN ASASRISTEEKILGDAMDKISTGDANKISAVSTGKDKILNASRDADASKILATHASANPN AGTDKILNNRADNVDEISNNCMQSADKILIQSADKIPNNRADNADKILTADMSADQTQTA RLAENKALNFKNPAQNYKLPPINLKSFNLVAAKLFTGRTHQIRVHLSSINRHILGDHLYG FKSENAKISRILLHAYLLYFIHPRSGKEVKICAGLPSEFLNFTTNQKVKDEIYEKILPTN VERYFSDISGWLRYV >gi|257441660|gb|ACYG01000027.1| GENE 329 370152 - 370817 758 221 aa, chain + ## HITS:1 COG:Cj1279c KEGG:ns NR:ns ## COG: Cj1279c COG3401 # Protein_GI_number: 15792603 # Func_class: R General function prediction only # Function: Fibronectin type 3 domain-containing protein # Organism: Campylobacter jejuni # 1 217 1 226 411 160 40.0 2e-39 MKKFYRLTLSATLAILVAGCATSSAPSASDESLPRVESIRTITSDNEIGLEWPRYDSNTA VLGFVVYRAPASGGEAKKIATIADPYSTHYVDTRLQPGTSYKYTVRTYGAKGVSAPSPVA IASTAKMLESVPFAQAIYGLPGRVKIIWRPHPDLRVSSYLIERRPKGGESWSTIKEVRGR LSAEYIDNIDYGEGYEYRITVKTENGELSKPSAVIAAAQAE >gi|257441660|gb|ACYG01000027.1| GENE 330 370845 - 373013 1711 722 aa, chain + ## HITS:1 COG:Cj1278c KEGG:ns NR:ns ## COG: Cj1278c COG0220 # Protein_GI_number: 15792602 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Campylobacter jejuni # 6 329 14 336 392 305 48.0 2e-82 MSLPPLPARFGEVEFLETARGRNLTLVRTKSFDSEFFITLKPSDGKVIVKGEKITKPAKI GHLQRALEIFKERFCGSIISQAFAYKDSSLTEKTPLILDENEILSLVKSSKFNKIFIEIG FGSGRHLLHQAHSNQDALLIGIEIYKPAIEQVAKLAIREGLQNIALIATDARILLSLLPA GCLQRVFLHFPVPWDDAPHRRVISDEFASQIARTLELGGRFELRTDSEEYFLYAMQKLSP YVQRKAGEISHFKNRDAAVASKYEDRWRKMDKDIYDLIYENKTAGLGEPQQFEMEFLKFD AAAIARNFKNSTFKGEDFFVHFEEIFYFDAQKSLDADWACTADGGVNFDAGSDSNFTSKT NSNPCANLDGGFISYEAGADGMSEAINLNAMRGKNLTKRASMDEISSGGGKILATTASDK ISACENATQILKKASGALNTNRADKTSAKDGVNLKEDRLSTNGVNLTGGGVASARNTIST GAATSAKFNRPASSEKRALACEQIATSSALNASGTEGALAAIDATGASTTPAAIGTIDAS NMPNLDGSFAATRAAEANATSNATHTDEANVTQILKKASAILCKNELQTELKNELNHAAE PQAELQNKSNSIKSQVGRRSEPSHDELQAEHQGKLNRAEQQDKQQSKPCCTEPQNERQSK SGAAEPQDVLILLSLGAFDFPQQCFIRANASGTRYFIRRPLPTRENHAAHQKISEIFSQW QR >gi|257441660|gb|ACYG01000027.1| GENE 331 373001 - 373690 700 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 10 228 4 222 223 274 62 5e-72 MAEITDDYNIITAAGLTLGYEKAGAVIQDASFGIGAKDFVIITGKSGSGKSTLLKSFYGG IDIIGGELNVCLCDLKGITNSDLRTLRQRIGIIFQNYRLINEWTIERNIMLPLMIMGYNQ QVCQDQAKKLLRHVELGHKMGKYPLELSGGEQQRVALARAMAHNPRLLLCDEPTGNLDDY SSAIIWNLLRSACESWNACVVIVTHKMPSTLRFRHRHFEIKDAKVNEID >gi|257441660|gb|ACYG01000027.1| GENE 332 373677 - 374492 977 271 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1285 NR:ns ## KEGG: CHAB381_1285 # Name: not_defined # Def: cell division protein FtsX # Organism: C.hominis_BAA-381 # Pathway: ABC transporters [PATH:cha02010] # 1 266 1 266 271 272 57.0 1e-71 MKSIKTHFGVIFSLVALLFSVQFGIFMSNLTKSYERSIQNEYNIVLVSKTPLSLQDAQKA VPKISSLSEISTAGITERLKGKISQNAFAELSKNLPKFYSVKLESFPDAAQLAKIEQDLK SIGSLTRVEIFKKTHDEIFKILLLIKSLVYGFAFLIVLLGVMLIHRQMRIWVYEHKERIE IMELFGASFLIKSGKLYRMAIIDSFIATLIVTCFYIALPSWEMFSTTLKGIGDLRTAIVL PYDALILLGVALALSIIAVSFVMLQIGNKRA >gi|257441660|gb|ACYG01000027.1| GENE 333 374489 - 375871 1843 460 aa, chain + ## HITS:1 COG:Cj1275c KEGG:ns NR:ns ## COG: Cj1275c COG0739 # Protein_GI_number: 15792599 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 28 459 18 396 397 226 36.0 1e-58 MKKAFLAPLLTLGLAAALTYAAPAKGQSTKDKIAKAGQELKSSQKEGMQLSQKIDEIAGQ IVKEQEGFKKREGEIKQLSDTIEGLKDQYATEAQELEKLNSQKVTLLSVQNDLESKIVSV ISQELSFDLITDVNSTTTPDSIMASEILEALGVVMNDELKGLIKDYENNQNFINEQNKKI KSIQASMAGYDKKKTDLDAKQTTQKEKLAQMKKDKEDYIAKLEKINDEQDAISKTLQELK IIDDAEEKAKAQKEEAARQAKLEAQKQKERQAREKEYAKAKVAAKKAGKPEPAPPSEPEP EVSEPADERVSKINQKVKQYGSSYQSSRVKKYGGAKTTAPLNGAYLKRKFGNYNDPVYNI KLFNENIVLGSNSGDTQVKAVLPGKVVFAKETAVLDKVVILEHSGGIHTIYAHLNQIPPT VRVGSNVKKGYIIGRIGSDLTFEVTQQNYHINPLDLISLR >gi|257441660|gb|ACYG01000027.1| GENE 334 375875 - 376219 142 114 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460780|ref|ZP_05625881.1| ## NR: gi|257460780|ref|ZP_05625881.1| hypothetical protein CAMGR0001_1549 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1549 [Campylobacter gracilis RM3268] # 1 114 1 114 114 119 100.0 6e-26 MSRENPKFGESCEDAESLNLSEQSSDCELNLSDENSAATLNLNDQSSAAIDIASTSNLDS ENSATGATALNFKNKNSATADIIATSKTMAGAAKTGSYNERRRSKNDENSAKRY >gi|257441660|gb|ACYG01000027.1| GENE 335 376245 - 377060 847 271 aa, chain + ## HITS:1 COG:Cj1166c KEGG:ns NR:ns ## COG: Cj1166c COG2966 # Protein_GI_number: 15792490 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 15 269 3 257 258 250 51.0 2e-66 MIAEMAPTKEVEEARPQIQELTNFLSEYTAKMLSIGTYTARIERCVRRIADAYDYEASLM IFVRHFIISVMDPADNSIRRTYVKTGAAAQISFDLISELSALSWEIYDEKIPLARARASF AEILASQKKSFAKTLILLSVANAAFCELFGGDGGAMALVFAATAFGICARYLLSKLKINL KIQYIAVSFAVSFIVSLGARYGLSATPDVAVGSSILFLIPGVWLINSVFDILNENMLVGI SRGLNTGLLIICIAIGLFLTLSISNLGLVNV >gi|257441660|gb|ACYG01000027.1| GENE 336 377053 - 377553 409 166 aa, chain + ## HITS:1 COG:Cj1165c KEGG:ns NR:ns ## COG: Cj1165c COG3610 # Protein_GI_number: 15792489 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 8 164 5 162 164 147 60.0 7e-36 MFDLAFSVFKDACFAAAAGLGFAYACMPPKKTLIFSALLAAVAHSCRFLLIQSQIFSIAA ATLFASFLIGVLGMLCAKRLKVPAEIIAFPALLPMIPGIYAYKAVLALFSYIRAAGAEHK LAHLISFFDNALATVSISLALGTGVSITLLIFYEQSLMITRGARGK >gi|257441660|gb|ACYG01000027.1| GENE 337 377860 - 378873 619 337 aa, chain + ## HITS:1 COG:no KEGG:BMULJ_06181 NR:ns ## KEGG: BMULJ_06181 # Name: not_defined # Def: hypothetical protein # Organism: B.multivorans_T # Pathway: not_defined # 161 323 58 222 363 96 37.0 1e-18 MALTEEDMKMWQGVSDHLTRMENDAEYHKEIEKQLYRGAPKKSIERIRQAGIKNSQSKLV SAIKKIDFSSNAELVKIQDEAIVLAENSLKNFLKEYNEHPNTSGGRYICSDTFKELFPCF EAKENRALVNDAIHNSSAVLAATQFEEVLKRDEPNKTKAIFITGIPGAGKTTSVKNFMSD DKVKLIFEGQLANPTPTIPKIEQCLQKRLDVTIAAVHIEPEKALDNTFKRFNEYGRGGSI EVMSSIQGNLPSGLKKLKEHFGDKINIIAIDRNSDRNKILTDEKEIYKLISIGSKEEIFK RLKTKLDQDFQKGRIDKACFAQANETKLNKIMSIRTH >gi|257441660|gb|ACYG01000027.1| GENE 338 379081 - 380241 1074 386 aa, chain - ## HITS:1 COG:PA4513_1 KEGG:ns NR:ns ## COG: PA4513_1 COG3182 # Protein_GI_number: 15599709 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Pseudomonas aeruginosa # 9 374 3 362 395 126 28.0 6e-29 MSSLLKRNKILFNVHLILSIVFSIPLLIIGVTGAILSYQYELEALINAGSKKVEKTGEMQ SIEKILQSFSEQTGAKQPVRLVVPKSDDEAFVVYANRNDAYLVDPYTAQIIGKDRGTSFV LTVMSLHRNLGLALSGNKTAAEVGKQIVGASAVAMILLVISGVWLHFPRLRRKFIEAIKP NFKLKKYALFYNLHTSLGSLSAVIYLLICLTGLNWSYSWYNDAVMKLFVSSQNLPQASAP KAAASKDHAAAPAKEESKKPATYKFSDAQRAYEIFRSSGIEYKEFILMLAAGDKIGVRYY EPDAPATARPKGASVKLKEGKVAEQKQTDGITVGEFKDANYQLHTGYFFGLAGKILWSIV SLCMALFIFSGFYMTVKRAFKSEKLG >gi|257441660|gb|ACYG01000027.1| GENE 339 380597 - 381028 252 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460787|ref|ZP_05625888.1| ## NR: gi|257460787|ref|ZP_05625888.1| hypothetical protein CAMGR0001_1556 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1556 [Campylobacter gracilis RM3268] # 1 143 1 143 143 276 100.0 5e-73 MSQSIVEFATIILYVTIGFCLIVSLLQTNRSYKTVYRGTLFIPTDPLLKIPMFIICLSFG VVTLSSPHVAKHNGNPIPCFYTHDKVCSQEYKAAGINLRYFEEGDPRCVDGYLQISEPRL ILSKIISVCAIIFSFIVSNSKRN >gi|257441660|gb|ACYG01000027.1| GENE 340 381105 - 381287 73 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460788|ref|ZP_05625889.1| ## NR: gi|257460788|ref|ZP_05625889.1| hypothetical protein CAMGR0001_1557 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1557 [Campylobacter gracilis RM3268] # 1 60 1 60 60 96 100.0 5e-19 MSYAVGFIRGVKIISIRGKISSVKFGAGFLYARRDIDFLQNFISEKLAEISKAKAVERNA >gi|257441660|gb|ACYG01000027.1| GENE 341 381332 - 382054 393 240 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460789|ref|ZP_05625890.1| ## NR: gi|257460789|ref|ZP_05625890.1| hypothetical protein CAMGR0001_1558 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1558 [Campylobacter gracilis RM3268] # 1 240 1 240 240 477 100.0 1e-133 MRLLYFVLFANVVLFVLCGLKNFLFKSSASYKTVQNGAWLIPPSPVAKFTLVIFLLSWGS IVAFDEPWIKRIKGKGKVTCFDANDPLCIDGFLHRSGDETALVIAMGIVLILISLWLLTE KGVIIDSRSIRREWECSPFKFSTKIDIENALMEKGMKGEMPILKIKDGQSGKNFTLSFPY TQQDIKFIEAEIRKRRYKMMKSKEAKTPLKSALRKTISLKDANERANIEILKNDKEGAGD >gi|257441660|gb|ACYG01000027.1| GENE 342 382363 - 383256 1097 297 aa, chain + ## HITS:1 COG:CAC1074 KEGG:ns NR:ns ## COG: CAC1074 COG0697 # Protein_GI_number: 15894359 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 8 283 6 285 298 112 29.0 8e-25 MNKSLEFRADIGMLFVAIAFGLGYLPTSQALASNNAFVLLFWRFFAASIIAGAIFFPKLK AITSREIKHGAVLSLFLFAGFTSQTFAFKFAQSSSVAFIIGLNVALVPFIAAALFRHKIY SYAYAGIALAVIGLYLIGDTQLGLGKGEALALVCACAYSFHIVLTNRFVQSCDVAGIAYV QILCLSVLCCFAAIFFERVSIVPVMDRSFFVAMAVICLLGTVFGFFAQALMQKYTTPVKT ALFFTLEPVTAGIMGVFVGGERLSAMQILGAALILAGVLISEIGNYLSARRSRSADV >gi|257441660|gb|ACYG01000027.1| GENE 343 383590 - 384303 1067 237 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1750 NR:ns ## KEGG: CCV52592_1750 # Name: not_defined # Def: von Willebrand factor type A domain-containing protein # Organism: C.curvus # Pathway: not_defined # 1 236 1 231 231 253 67.0 6e-66 MKKIILLVAALAGIMFAKSVELATPADHKDGVNHLELVLILDKSGSMSGLESDTIGGFNS MIEKERKEGIDASVTTVLFDTKFNVIHDRTPLKKVENLTSKEYYAGGNTALLDAVGSTIA RIERVPDIYAKNNRVLFVIITDGMENSSREYSKAQIKKMISDKQEKYDWEFIFLGANIDA ASEAQSIGIKSENALKYENSKEGVSKNFEAAAEISKDVATDNKANSKWRDKVLQDKK >gi|257441660|gb|ACYG01000027.1| GENE 344 384655 - 385761 1292 368 aa, chain + ## HITS:1 COG:BMEII0546 KEGG:ns NR:ns ## COG: BMEII0546 COG3616 # Protein_GI_number: 17988891 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid aldolase or racemase # Organism: Brucella melitensis # 2 368 12 360 360 186 34.0 4e-47 MSVSDIDTPALLIDREIVLRNLQKMQSYADAAGVSLRPHTKTHKMPYFAKLQKSLGAAGI TVAKTGEAEIMAANGLKDIFIANEIVGELKFRRIIALLRAGINLSFGTDSIEQAGLIERA FERSGTKACVLAEIEVGENRSGFVEKQDFAAFIKFIKGCKNIEFRGVFSHDGHSYKAADK SECERIHLAAQRRTLEFADIARELALPARVVSIGSTPSLINDFEILKGITEIRPGTYIFM DASQAQAYGDYSMNAASILTTVISRPTADRIITDVGAKGLTQQRRTEGFTATPGLGRIKG TEVWINGVYDEHAIIYDRALRDAVRVGDRLEIYPNHICPVVNLHEFAYLVSGGEVVEKIA VLCRGKLQ >gi|257441660|gb|ACYG01000027.1| GENE 345 385905 - 386345 577 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165346|ref|YP_001466236.1| 50S ribosomal protein L23 [Campylobacter concisus 13826] # 1 145 1 145 148 226 72 9e-58 MRLWTISFKYLDAKGLVALWREALLAKNVLAELTKGYKNHPQLDRFYAHENALEAVNAYL AEVYAQACARGYKFDAAKVGEFDARNLAQISVARGQIEYEFAFLQKKLKSRDVKAYERNL SVKNVEIASIFKEVEGGIEPWEKVKI >gi|257441660|gb|ACYG01000027.1| GENE 346 386262 - 386552 170 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLALIRHVTPLIDRGVCDAAEAARRAILYDATLSLALWQTDKFKSSAAYEKLARISRVC SSPLPRETALNFNLLPRLDSALDLFKNARDFYIFYA >gi|257441660|gb|ACYG01000027.1| GENE 347 386721 - 387353 541 210 aa, chain - ## HITS:1 COG:jhp0318 KEGG:ns NR:ns ## COG: jhp0318 COG0790 # Protein_GI_number: 15611386 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Helicobacter pylori J99 # 35 182 55 203 251 95 40.0 8e-20 MKNKILILALIATLAANFALAENFEITADDISRATKSCDKGDMKSCGALAQIYNYGWGVP QDLLKAAPLYVKACKGGDAESCVNLGILYQSGEGMPRDEAKAAELFDKACDDGHAIGCSN AGSAYIRGRGVRKDAIKGVGYYVRGCDMDIADSWLACLNLARLYEGSDNVKAVEYYKKAC ELGGKDRFMSSVAEHEQIWKSSCESYERLK >gi|257441660|gb|ACYG01000027.1| GENE 348 387410 - 390049 1823 879 aa, chain - ## HITS:1 COG:no KEGG:HDN1F_00180 NR:ns ## KEGG: HDN1F_00180 # Name: not_defined # Def: hypothetical protein # Organism: Gammaproteobacterium_HdN1 # Pathway: not_defined # 44 412 52 384 567 122 25.0 9e-26 MDKLDKEGLAEAFVARLKALARSGGADLRELDREFYGFSVRLGVRYDFDGKFSVSQISGG ERAQLHFADIAQFEAHARECLRAASTDAELSETFMLRLRADPQKAAMNADQIIKFHDFKP FSVQLRCEHCGGSGRRRCKACEGAGKTPCANCGGRGRLICSTCKGAGGYSRAALSSTDAH VRGLSGGDSAGSASNSMGYRFISCASCGGSGSRICPACGGAGRLRCEKCGGAGDFRCEHC DGRGYFTRTGKVSVYARPSVSIGASSQVFGRELLEFLCSKGVGFAARRLLFRLSSLRAAQ GGCEAVFSAEDDFLRLSFAVCGKAYDAACFGGVTFVRPNFFDEVFASELAAARGAPARLG RNDAQSLFTLFRAKPALDAAMRLASAKLRGETLNLDQLRGSDGYFNSVNSTCGTADRDAL SLAKDASRKENLEGGASVKFAGMKFASAPANSMGAEDNHLGLRGEQGRFAGGVGGGIKFA GADLLEGGENSAGDFEARQQSSEALAQNRPNFAGLQEGLGGTSDCAAEDLYKLRSKRDYR GLSALGAENSTNSIDSSAINSANSKNFAAAKFKNRANTQSPAASNSKISLFARLKKFFFP RSLREDCAQSFAAAIMRVCEGFISQQCARDLGSAMAGALGVLSPRYDRAVWCIGGGALIA AAALACEGCFEMIFAEHYFWALACGVAIAAAGLLGGVALWLASVVQCTVKARKIPREYRC GRGGAAFARFCKALLCAVLASAIYGGAANTGYVPKTGAAGLLRGWMPTFFEDENSTSASD GVNSVDENSTSASSNGSESPASNSASGATKDSAAMQKDKILYIQKSIGVRQDGIFGARTL KKAREVLDQNLSGVDEIYEALKSKEQARSNPNSSDQTAP >gi|257441660|gb|ACYG01000027.1| GENE 349 390884 - 391087 65 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460803|ref|ZP_05625904.1| ## NR: gi|257460803|ref|ZP_05625904.1| hypothetical protein CAMGR0001_1572 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1572 [Campylobacter gracilis RM3268] # 1 67 1 67 67 103 100.0 4e-21 MPHKLVVRFKISRGRAQCHVSLRDSKFHVERTVKLIRRSRSRSPHDLKFALAPRHAPPRV KLCGIAS >gi|257441660|gb|ACYG01000027.1| GENE 350 391430 - 393076 2157 548 aa, chain - ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 547 1 555 556 595 54.0 1e-170 MLSDIEIANAAKPDKISNVAKNLGLSEDEIELYGHYKAKLNIKPRSRASKLILVTATNPT PFGEGKTTTSIGLADALKRLGKSVCLALREPSLGPVFGIKGGAAGGGYSQLVPMDDLNLH FNGDFHAITSANNLISAVIDNSLYQENPLKIDKILWKRCMDMNDRALRHITVGQGGRTDG VQREDGFNITAASEIMAVLCLSNDLAELKENIANIMVAYDTQGEPIYVRDLGCADAVAIL LKDAMKPNLIQSLEHTPTLVHGGPFANIAHGCNSIMASKLALSLADYAVTEAGFGSELGA EKFIDIKCRRAGIAPDAAVLVSTIRSLKYNGGADKENIASPDLAALQRGIVNLGGHIEIL QNFGLNPVVALNRFSFDSDGEIAFVRDYCKQRGVQMAICENFAKGGEGALELARLVVDEC ERAKELKFAYELSDDTASKIEKIATKIYGASEVIFEPEAQKALQHIKALGLERLNVCIAK TQYSFSDDAKALGRARDFKLSVKDLQIRTGAGFIVAVCGKIMLMPGLPKVPNALNMRITS EGVISGLA >gi|257441660|gb|ACYG01000027.1| GENE 351 393217 - 393975 833 252 aa, chain - ## HITS:1 COG:Cj0255c KEGG:ns NR:ns ## COG: Cj0255c COG0708 # Protein_GI_number: 15791626 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Campylobacter jejuni # 1 252 1 252 252 339 61.0 3e-93 MKLISWNVNGLRAVLGKDGFAWLAEQNPDFLGLQEIKVSEKDAPKGLYELGFSQIDLNSA ARAGYSGVASLAKFKSETSKALFFPDDEGRVLQHRFGDVVLFNIYFPNGQKDEARLAYKM EFYAKFLAYARSLAEQGLGVIFCGDVNTAHREIDLANPKANSKTSGFLPIERAWLDEVEA AGFVDTFRAVHGELRDAYSWWSYRFNARAKNVGWRIDYFFISANLRSQLKDAFILSDVMG SDHCPVGIEIEI >gi|257441660|gb|ACYG01000027.1| GENE 352 394043 - 394405 549 120 aa, chain + ## HITS:1 COG:Cj0257 KEGG:ns NR:ns ## COG: Cj0257 COG0818 # Protein_GI_number: 15791628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Campylobacter jejuni # 4 113 2 111 118 74 42.0 4e-14 MRNQPKYRFFANWSYAMAGLCEMLRSERSFRLELCVFVPLLLSLFFWNFSATLNLFLIFG TVFTIALECVNSAIERAVDLATSEIHPLAKGAKDTASTAVMMSLFLNAALWGYAFIGKFF >gi|257441660|gb|ACYG01000027.1| GENE 353 394972 - 395928 729 318 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1998 NR:ns ## KEGG: CCV52592_1998 # Name: not_defined # Def: amino acid carrier family protein # Organism: C.curvus # Pathway: not_defined # 1 317 60 358 361 241 39.0 3e-62 MKFSTLQSEINSKFKEYAIIGWSIAQDASKTDKIRLSSQKLQKQALIYLDAFSGEIKGAP MPRDEGFIGAINKLHAELFLGRGGRIFTGIVGLSALLIGISGFFIYKKFWQNLFSLRLDR AIYFMRGAHRLIGVASTPVMFAITISGAWWELRAVTYKPLANPCGAVLQNFKTERNSTVA ASNGTVSMKTAQNLATLDEALAKIAVKFKEFRSTYIAFPLCPGGAFTVYGFEAGQNPLQS PYASRITISDAGEILKADFINDADFSDKLQDGFRRAHAGSYGAITKLIWFLTGLAPLFLS ICGFYITLKNRNSKRRKL >gi|257441660|gb|ACYG01000027.1| GENE 354 395925 - 398060 2175 711 aa, chain + ## HITS:1 COG:STM1204 KEGG:ns NR:ns ## COG: STM1204 COG4773 # Protein_GI_number: 16764559 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Salmonella typhimurium LT2 # 30 711 37 724 724 365 33.0 1e-100 MKKVSLSLVVVLNMLTSLYAENNATASTPEDLGTIEVQDTQKLRRDDRDYEARKLVKSTT RLDLTARETPQSLTVVTEAKLKDMGITDYQVLMRNIAGITSGRMDERLYPTARGFSIDYY LLDSMPSFGGFSLGANDLNLLPYERVEVVKGANGLLAGAGNPAASLNFIRKHADSTIPKG YISLNGGSYDKYGLKTDVQSPLNQSGSVRGRLAFMHERSHSYMDYYNRRNTAVYGVLDID VTDDSRLSFGSFYQTLRRHGTRWGGMPAFNSDGTRTHFGKNKIFSQPWTRYDISTLDFYA DFKQYFSNEASLSLSYSFRRAHTDSNLLYYGGRVGPGGIGNVADLSVYANKREENIHNID AYANIPYELFGQDHEFVFGVMYNLYKKGSDNVSSYWNNRNTPAGLAYAARTRINFNDLHI EDPRLPYVDQNNADRTIQKAIYAANKLSITEDLKLLLGTRMSYYKYKITGGADNRNFTRE ITPYTGITYDLDDHHTLYASYTSIFKPQTYKDKNNKYLDPIQGKDYEAGIKGEYFDGDLQ ASLGVFKIIQDKLGIRTDEYITGTNSYAYRQGRGVTSRGFEADVNGKITDALSLSMGLAH YKAKDADGNIYASDSSRTSANLFAKYEIGTFRIGAGAMYRSKIYSDSPYGRIEQKAYTIA NVMLGYKASKNLDVQLNVDNITDKRYFEGIGSNRMIYGDPRTFNLSLTYSF >gi|257441660|gb|ACYG01000027.1| GENE 355 398282 - 400735 2975 817 aa, chain + ## HITS:1 COG:Cj0264c KEGG:ns NR:ns ## COG: Cj0264c COG0243 # Protein_GI_number: 15791635 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 1 812 2 834 838 594 38.0 1e-169 MKRRDFLKLGALAAASAQAKQFNALAQAIFDEQMGLCANKFGAFYVQTIGGRVVGTEPFE GDAMPTVLNNALSDHIQNETRVKYPYVRKIFLADPSNPKPQLRGKEPFVRVSWDEAIKLS AKILKENFDKYGSQAIYGQLYQWGSLGKVGHSQRTAKRMLNALGGYVSELGGYSYGAATA FLPHVTGSIDPTHNPTRWEGVVKEAKTIVFWGTNPVVSNKIATSVPMHNSYAYYEIMKEK FKKGEMKIYSVDVYRNETAEYFGAHYLAVRPCTDTAMLIGLCEYLYENGLYDKEFIERYT VGFNKFKEYFTGAKDGVKKDLAWASKICGVSEKELKSLADTLAKKDTLIVTGYAIQRQHH GEMAYWALIALAAMLGDIGKTGRGYVMNDQMHKNADISFIAPKLQAFNPAVNEKYIAPQG KLAKAKYHEIPNSRLIDAIMEPGKQIERNGKKYVMPHIRVMFNANGSTFTRHPDTNRAVA AMRKIEAIITTEPFWTSTARLSDIVLPSALECERTDIEFANSTSEYLFAIKPLVKPAGES KSDFEIARLICAQWGEEYEQAFSESKTELEWVKEIYADAVQKAEGMGIAMPKFEEFWQKG YVKFDQVDEKKRYFTNYADFRADPEKNALKTPSGKIELYSEAVEKLGYADCPPHATWMEP FEWLGGDVSKYPIAISGAHSKFRLHSQLNSSLIRNYAEIAGREPALISLATAKARGIKTG DVVRIYNDRGEILCGALVSDTAQDNVVIVSEGAWYDPAVWGERSLCKHGNINVLTRDVPS SQLSQSNTAHTSMVQIEKFKGQLPSVTAFDRPATIEV >gi|257441660|gb|ACYG01000027.1| GENE 356 401361 - 402014 783 217 aa, chain - ## HITS:1 COG:aq_806 KEGG:ns NR:ns ## COG: aq_806 COG0044 # Protein_GI_number: 15606174 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Aquifex aeolicus # 2 211 214 421 422 196 46.0 2e-50 MIARDLLLAKKTGGHIHIAHVSSAWSLKLIKQAKREGIRVTCEATPHHFTFDERELMGYD TNFKMSPPLRTQSDVQAIREALKSGLIDAIVTDHAPHNTDDKFVEFDHAPFGILGLQTLV PLTLRLVNEGVISLEDMVRLCSFNPAKILNLKDKGEIKEGFLADVAIIDPQISYVYDEAL NKSKSRNSPLFGKQLTGAAVCTIKSGRVVYEFPNVVA >gi|257441660|gb|ACYG01000027.1| GENE 357 401914 - 402639 862 241 aa, chain - ## HITS:1 COG:aq_806 KEGG:ns NR:ns ## COG: aq_806 COG0044 # Protein_GI_number: 15606174 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Aquifex aeolicus # 1 197 2 200 422 177 46.0 2e-44 MKILIKNGTIVNWGGSEEANVLIEGDKISKITRECPAADRVIDAAGKLVMPGLIDMHVHF RDPGLEYKDDVISGSETAVAGGVTTCLPMANTRPVNDNSSITRAMIAKAKARGLIDLLPI GAISQDCKGAKIVEMGDMLEAGCVAFSDDGLPVTDSSVMRQALEYSAHFGSFVINHSEDC SLCHGGVMNEGKISAILSKGDGERKRGDHDRARSTACQKDGRAHPHRARELGVVAKAHKA G >gi|257441660|gb|ACYG01000027.1| GENE 358 402636 - 403565 1155 309 aa, chain - ## HITS:1 COG:CC2443 KEGG:ns NR:ns ## COG: CC2443 COG0540 # Protein_GI_number: 16126682 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Caulobacter vibrioides # 5 302 26 323 332 281 50.0 9e-76 MYKLKHLLSAQDLSREDIYDFIDLAREFKALNRSDVKKSDSLRGKTVINAFFENSTRTRT SFEIAAKRLGADSVNFTAADSSTKKGETLIDTIRNMQAMRTDIFVLRHSCSGAAKFVAAN CDASIVNAGDGLNEHPSQALLDLFTISERKGRIENLNVAIIGDIFRSRVARSDIWAMKKL GINVRLFGPPMMLRDCDAFGCPICKSVEEAIEGADVIIMLRIQLERQDGEPSFPSVREYS KFFGLTARRMQAAKEGVMIMHPGPINRGVEINSDVADDPRYSCVLDQVENGEAMRMAILH TINLNRSAR >gi|257441660|gb|ACYG01000027.1| GENE 359 403845 - 404375 690 176 aa, chain - ## HITS:1 COG:BS_ydeQ KEGG:ns NR:ns ## COG: BS_ydeQ COG2249 # Protein_GI_number: 16077597 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus subtilis # 1 176 4 176 197 159 45.0 4e-39 MKTLIILAHPNIANSLVNRHWRDAVLAHPDKFELHDLYALYADFKIDVEKEQKLLESHDK IVLQFPFRFSNCTPLLKQWFEDVFTRGWAYGGEDGGKLKGKKFALAISLGATEANYSKNG IVGFSVDEVLAPFKATFNFVGAIALPNFVSYGFTYDKSEQAVENSAKNYIKYLNKL >gi|257441660|gb|ACYG01000027.1| GENE 360 404933 - 405763 527 276 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460819|ref|ZP_05625920.1| ## NR: gi|257460819|ref|ZP_05625920.1| hypothetical protein CAMGR0001_1588 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1588 [Campylobacter gracilis RM3268] # 1 276 1 276 276 433 100.0 1e-120 MKRRILKGCGRDLAHNFIRASGEQGFGRLRNSVSAGGGQNFTSAYVGQNFIKIGSEQNFI SADRARNFNFINDFSFISAARNFTLALAATCVLSGCDGGSDAQDREQSARSEQNFSAGNQ GRNFNKSTDSSEQNSAQNYTQGSAQNSAPQGFESKKKSDLNSTIDELANDAKVLGEALQN LQKKAPEVLNDFATRNADRTKDLLKQGEAAAREAGKNLDQMGQSLQGIIKDANESLGKVL EGFGVQPRQEPRGGRSQERDDNSDPEEAAGRQSFRI >gi|257441660|gb|ACYG01000027.1| GENE 361 405775 - 406905 250 376 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 199 355 743 898 904 100 38 7e-20 MKNIILVIGEEIRYDAALMSYISRSYERVFGRMDDLKFLSENDKVLPFALEKMIDSYDFI TIFAANSAYAVVGKILSTLSFDSLELKNGETLAPSMARAVAKNSFLLNVRGCSVNVIKAL CLQSLPPILQDAPNAGESFYLFDCEYESVKQRLESLAISYKISLTISRPSSFLLLVRASA MKFGALDAFLQSVGKYYESCYIEGGDFMGFVVDRLREIGAKITFAESCTAGLIAAKFGAV AGVSDVFDGSLVSYANEIKNLWLNVGEDTLARYGAVSAQTVGEMLEGALQSSGASFALAV SGIAGPGGGSAQKPVGTVFIGAKEQGGKQIVGEFHLKGDRNYIREQSADIAICLLLKLRS DLFFGRLPSAIARDEI >gi|257441660|gb|ACYG01000027.1| GENE 362 407024 - 409783 3011 919 aa, chain + ## HITS:1 COG:Cj1061c KEGG:ns NR:ns ## COG: Cj1061c COG0060 # Protein_GI_number: 15792388 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Campylobacter jejuni # 1 916 1 912 917 1248 65.0 0 MDYKDTLFLPTTDFAMRGALPQNEPARFRAWYDERKIYEKMKARRKGASVSFNIHDGPPY ANGHLHIGHALNKILKDIITKTHYFFGEDIRYVPGWDCHGLPIEQQVEIKLGERKKSLSK VQIRELCRQHAKEFIDVQRNEFKDMGILGDWDDPYLTLKFEFEAEIYKALCQIAKKGILI ERSKPVFWSWAAKSALAEAEVEYKDKEDYSIFVAFDLSDEANAKIGAKGAKAVIWTTTPW TLPANGAISLNPNEIYALTSENLILAKPLVESLVSLGITEGKIVKEFKATELEGLNAINP LNDRASKLILGEHVLMDGGTGLVHTAPGHGEDDYFVGLKYGIEVIMPVDEGGCFDQTLKT KKLFRADVVDELVGMHIFKANEKILELLGPALIKSGKFVHSYPHCWRTHKPVIYRATKQW FIAMDEPMPSGKTLRQVALEQIGKVKFYPQSGINRLTSMIENRPDWCISRQRDWGVPIAF FRDKSTKEPIFDEKILNNIYEIFKAKGADAWWQMEISELLPQDSGYRPENLEKVMDILDV WFDSGSTWKAVLQSGAYDAGKFPADMYLEGSDQHRGWFQSSLLLSCAINECAPYKSILTH GFTVDEKGQKMSKSVGNVVYPQEVAKSHGVEILRLWVAMSDYSTDLKISDNILKQVSEQY RKIRNTIRFLLASTSDLNEIETSNFTRLDRWILTRAANAFSSAEAAFRNYDFSKGFNALL NFLSADLSGIYLDICKDRLYCDESDEPRRRSAQSAIALITRALLPLIAPTLTYTIDEVMQ FAPHIIKEGKQDAFDLIYKPIEFDDFLEFDEILIKSREKFFELIDALKKDKIIKSTLELV LQTSSNEILSNDILGVADWFMVSDVDTLQSEEALAEFKINDEIFRLVKSSKHKCPRCWKF NAKEPDELCPRCAKVMHAR >gi|257441660|gb|ACYG01000027.1| GENE 363 409880 - 411238 1746 452 aa, chain + ## HITS:1 COG:Cj1059c KEGG:ns NR:ns ## COG: Cj1059c COG0154 # Protein_GI_number: 15792386 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Campylobacter jejuni # 1 451 1 452 453 585 70.0 1e-167 MISLKEALKLSADEISALRAELKDKILKTKELGAYVEQLTGEALNVSGEGVPIAIKDNIQ VKNWNVTSASKILQGYVAPYDATVIKKLRERGLAPFGRTNMDEFAMGSTTESSFYGKTLN PTDHSRVPGGSSGGSAAAVAANIAVAALGSDTGGSIRQPAAFCGCVGFKPSYGRVSRYGL AAYSSSLDQIGPITRSVEDAAILYDIIAGRDEMDSTSYAGAYESTADKLNADRKLKIAVI KNYIDEASQQVKEALSLSIEKLKSFGHEIVYRDLCSSKYDIATYYIIATAEASANLSRYD GVRYGNRAKALNLKELYANTRGEGFGDEVKRRMLLGTFVLSSGYYDAYYIKAQKARAFIK SEYEEILKDADLIFMPIAPGVAYKFGELSDPLRAYLSDIYTIGVNLAGLPAISVPVAKNK EALNISAQLIGRAYDEQTVLDGGLSLEKIVKG >gi|257441660|gb|ACYG01000027.1| GENE 364 411241 - 412692 1901 483 aa, chain + ## HITS:1 COG:Cj1058c_3 KEGG:ns NR:ns ## COG: Cj1058c_3 COG0516 # Protein_GI_number: 15792385 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Campylobacter jejuni # 201 483 1 284 285 408 72.0 1e-113 MKIVKKALTFEDVLLVPQYSEILPKEVDISTSFTKNITLNTPLVSAAMDTVTEYRTAIMM ARLGGIGVIHKNMDEDSQAKMVRRVKKSESGVIIDPISIKADATIKDALDLMGEYHISGI PVIDNNGVLIGILTNRDLRFETDTAALVGEKMTKAPLITAPKGCTLDDAEKIFRNNKVEK LPIIDANGHLEGLITIKDLKKRIEYPSANKDKFGRLRVAAAIGVGHLQRAEALVKAGVDA LVMDSAHGHSKGIIDTLKELKRNFDVDVVVGNVANPASIKDIANAGADAIKVGIGPGSIC TTRIVAGVGVPQFTAINDCAIEAAKFGIPIIADGGIKYSGDIAKALAAGASSVMMGSLLA GCYETPGELITFQGRQYKTYRGMGSLAAMHKGSSDRYFQDGTAKEKLVPEGVEGRVPYAG MLKDVIFQLLGGLRSSMGYCGSKDIATFQQKAEFVEITSAGLKESHVHDVIITQEAPNYR VNQ >gi|257441660|gb|ACYG01000027.1| GENE 365 412689 - 413795 1122 368 aa, chain + ## HITS:1 COG:MA2714_1 KEGG:ns NR:ns ## COG: MA2714_1 COG2021 # Protein_GI_number: 20091538 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Methanosarcina acetivorans str.C2A # 16 365 41 416 419 300 42.0 2e-81 MILQSKIQNFDEPLYLESGRVFSNFKLVYETYGELNPDKSNVIVICHALTGSAHAAGLYE GDVKPGWWDGLIGDHKAVDTTKFFVICINILASPFGSTCPLDVDESSGREYRLRFPVVVV SDVVRAQMMLLKRLGIARARAVIGGSLGGMQALCYAIEYPEFADEIFVLASTYATQPWAI AFNKIATEAILRDPNFKGGNYDKNLIAEHGLDGMAVGRMAGHISFLSPSSMQEKFGRNYV ETDGLYEINGRFQVDRYLEYNGENFARRFDPLCYLYIAKMMNIFDCTRHYGNLKNACAQI KSRLHLISFKGDVLFPPGLMKEIYDAMSDLGKKDRTSYAQIDSDYGHDAFLVEIEKFDYI IKRILDEF >gi|257441660|gb|ACYG01000027.1| GENE 366 413785 - 413970 325 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460826|ref|ZP_05625927.1| ## NR: gi|257460826|ref|ZP_05625927.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 61 1 61 61 67 100.0 3e-10 MSFEEKMEKINALLKSLNDKDLSLEESVKLYKQGVALLKEAKEILENAKLEVAEINAPEQ A >gi|257441660|gb|ACYG01000027.1| GENE 367 413980 - 415155 1187 391 aa, chain + ## HITS:1 COG:Cj1056c KEGG:ns NR:ns ## COG: Cj1056c COG0388 # Protein_GI_number: 15792383 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Campylobacter jejuni # 214 385 92 255 258 143 45.0 5e-34 MINVCVLQLPTLSMSENRIDYYMKVAKDNGARIVLLGEYELNSFFSELKKMPRSIACEQS EHKQELMARLAAKYDLHIVAPIIRAASGAILRQAGIFGGAAQKSARCGGENSASLKSEQG RKGELNSKSDLNSNDGSNSKGALNSKNEQNCKGGLSSCGAHALNFKAANSADGLNLSASI PSNSNASNLKAESQKDASEEEIFCASENEPIWVKSCAKFSPSEVKFYDQNILMDYPHWNE EGFFANRKSRKIGKISPMIFSEGGVKFGVCFGYEAHFDIFWRYFMQKNVGCVLVPCASTF ESGGRWRELLKMRAFTNSLYVIRANRIGEAKFGESEFKFYGESFVATPGGEIANELKNEE GVLMCEVDADEIAAARGLWKFRKNLVSRGLL >gi|257441660|gb|ACYG01000027.1| GENE 368 415152 - 415817 668 221 aa, chain + ## HITS:1 COG:MA0255 KEGG:ns NR:ns ## COG: MA0255 COG0476 # Protein_GI_number: 20089153 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Methanosarcina acetivorans str.C2A # 4 221 9 231 247 107 32.0 2e-23 MNYFHRQIQLWGEQTQRALSDKRILIIGAGGLGSSLSYALGASGIGRISVVDFDTVALHN IHRQILFTLADEGKFKADVFKSRTEARYDGVSVEVHKSRADEFFTSATASGEKFDLILDA TDNLATRAQIDAFAKQIGVPWVFASVDSWQCQVCFVQNADFKFFPSLNATPAGITAAIVM FAASFEANLALRYLAGLEVEKDLLYYANFFGGELEVRKIKL >gi|257441660|gb|ACYG01000027.1| GENE 369 415827 - 417158 892 443 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1159 NR:ns ## KEGG: CHAB381_1159 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 13 419 10 447 448 261 39.0 4e-68 MKYLKAILQFIAVFACLILYLFISGRVGLHKSQSHYTITIGSDATKEAGLDKYVSEAEMQ SFAFRHWDIDYNSNPKNVFKEPATDVELKRLLKSKQTDKILKFMKDNNLTVDHTMHGGVT PVMYSSFWDDTNTTQELIKLGADIHKKDEYKLSAMAYAIENNATKAVRLLLDNGVKFEEA EVVRNRLLPPNYNHIKSLQISDDGNFTLIYDTDYPMISIGEPNYFFSYLTNTNMYEIAKM ALESGYKPYIWKFQNSTVGLRYGNDIKKVVPEGILNDKAEPTDGFDITEYDFSLYDTFPG TPNYEPILKLLMQYNVGGQPSPEFLKRKYDDCHRNYIYSLDSYYKINYDATYYIPKSEIS LIMTVYRKYCKDKNFTFKDVYEYTKFTSKLNEMKAVSIHMYTRDKDGRKLDQPYKDNLKK LDKYIDEISSDEIKNAIKESYEN >gi|257441660|gb|ACYG01000027.1| GENE 370 417317 - 417727 485 136 aa, chain - ## HITS:1 COG:SP1636 KEGG:ns NR:ns ## COG: SP1636 COG1959 # Protein_GI_number: 15901472 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 134 1 138 145 100 39.0 6e-22 MQVGIKFSLAVHIMLCVAYFREEKVTGDFVAASSGINPAIARKLISQLKNAALVLTTAGV GGITLARDARLITLLDIYEAVSEEDAMFRLHKGSPSACPVGGKIEAVLAPRFARIQNDFK KSLSSVSLADLLSDLG >gi|257441660|gb|ACYG01000027.1| GENE 371 418687 - 419322 971 211 aa, chain - ## HITS:1 COG:SP1627 KEGG:ns NR:ns ## COG: SP1627 COG2910 # Protein_GI_number: 15901463 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Streptococcus pneumoniae TIGR4 # 3 197 2 195 209 185 46.0 4e-47 MKKVAIIGANGKSGSALVAEALKQGYDVTGFARNKEYKNGAIKLVHKDVFELSKADLAGF DVVISAIATWTPQTFPLHAKMTQHIAELLSGTQTRLFVIGGAGVLYTDASRKTRLMDTPS FPAEYMGVAGATAASYEVLKASKDLIWTYVIPAAEYDANAARTGSYVLGGDELILNGKGK SYIGYADLALAVIDEIKAQKFIGKPFTAVGE >gi|257441660|gb|ACYG01000027.1| GENE 372 419533 - 419907 479 124 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0851 NR:ns ## KEGG: CCC13826_0851 # Name: not_defined # Def: mate efflux family protein # Organism: C.concisus # Pathway: not_defined # 1 124 1 124 124 189 72.0 3e-47 MSNFKIVSTKSEPRVELKEALGLSGCELSINELPANASVPFVHSHKQNEELYLVLKGGGA LFIDGEEKAVKEGDAIRIDPAGKRCFKAGAQGMKFICIQTKRGSLEQYTNGDGVINDDVK PSWL >gi|257441660|gb|ACYG01000027.1| GENE 373 420073 - 420912 803 279 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0852 NR:ns ## KEGG: CCC13826_0852 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 274 1 274 294 333 64.0 4e-90 MQNSAFKTLTLIAKKNFKRLFLTFSLVLAENGLFLAYPVLAGIAINAIVAGDTILALSYS GLVFVGWGLGSIRRRVDTQVFTRIYAGLAVSVIMNEKRAAKDESVIIARANLSREFVDFF EQHFPVFFTSVVSIFGSAIMLLFIEFYVGLAVFALLAVFGILLPKYITKNDRLYLKLNNQ LEREAGRISVGDENTLNRHYDVLSKLRIRISNREAMSFFIIGASAAAIFSLAIFLLSSNH ANAGHIYSVLTYLWTFAISLDDAPRLVEEFSKLKTSASA >gi|257441660|gb|ACYG01000027.1| GENE 374 420999 - 421955 1150 318 aa, chain + ## HITS:1 COG:BS_czcD KEGG:ns NR:ns ## COG: BS_czcD COG1230 # Protein_GI_number: 16079718 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Bacillus subtilis # 10 316 5 311 311 317 51.0 3e-86 MHENHAHCAHSHASNKVVLRNSFLIIFAYMLVEVAGSFATNSLALLSDAGHMLSDAAALG LSLFAFKFGERKGNLQNTFGYRRIEILAATINAVMLIVIAVFIVIEATRRLQNPPEVATT GMLAISTLGLVVNIVVAYYMLRGGDVRENVNMRGAYAHVLGDALGSVGAITAALLMMCFG WGWADAAASVLVAALIVKSGWGVLKDSLNILMEGSPKGVCLDGLVAQIRGVDGVLSAHDL HVWSITSGANALTAHIVVSGELSVREAEQIMAEISHEMEHLGITHTTLQLESSENECGGE LICEVRSNAAGVHLGHSH >gi|257441660|gb|ACYG01000027.1| GENE 375 422699 - 423154 308 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460840|ref|ZP_05625941.1| ## NR: gi|257460840|ref|ZP_05625941.1| hypothetical protein CAMGR0001_1609 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1609 [Campylobacter gracilis RM3268] # 1 151 54 204 204 226 100.0 3e-58 MSLLKGYFLFPGDIRLPFTTAILELFAFYVSSSLSDFYVKEVDRKLNFIFFIAFATIGIL ALTAVTYIIVFGFMLFGLDLDKKLVAILSAAILFIGTYSTAFSFRKSNYELSKFLQIVSL KRRWNANETLSSILLLIGVIIWLNFIVFESK >gi|257441660|gb|ACYG01000027.1| GENE 376 423843 - 424403 225 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460843|ref|ZP_05625944.1| ## NR: gi|257460843|ref|ZP_05625944.1| hypothetical protein CAMGR0001_1612 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1612 [Campylobacter gracilis RM3268] # 1 186 32 217 217 270 99.0 3e-71 MRKNIKYLIYKFLLGNVFLAVFLISFYVASWHLTMLSGLDVIGFLKGYFLFPGDIRLPFT TAILELFAFYISSSLSDFYVKGIDRKLNFIFFIAFATIGIFIVNILSLFMIFGTIVWQKS NAAFSAMCLFLGIIWTAWLFKSSEYELGKFLQNCSSKRHYKIDKALLIVLLIIALLVIIP IIAKSF >gi|257441660|gb|ACYG01000027.1| GENE 377 424489 - 425712 1235 407 aa, chain - ## HITS:1 COG:Cj1622_1 KEGG:ns NR:ns ## COG: Cj1622_1 COG0117 # Protein_GI_number: 15792927 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Campylobacter jejuni # 4 186 13 172 177 159 41.0 7e-39 MNDEFYMDLALRAAWRYQALTLPNPAVGCVLLDRGGRVLGIGAHKKAGFLHAEANAVFAA LCDLDVNFAQDFACEYAREFGVKFQNLEALKSALLQPSFAYDFILNRHGGLLRGACAYVT LEPCAHRGKTPSCAELLAQLGLSRVVIGARDTNAQAAGGAEILRRGSIEIKFDVCHAAAE ELAEPFYLARESGFCFIKINATLNGAAHGRIGSEKQRVFVHELRSVCDYVGVGGQTVRAD RPTLDVRAAKFDEISALVGSVDKPLLDTRVAKLGEIGTLTNSTDKLINTSCTAPRNLKLR APDVWIRSRRALSDFDASIPLFGVAGRKVEVSRSLPADAKITMIEAGASSFDEFAQFASH ALIFYSAQMRNAGNFRANAALRPLFISRAGDPHLEANEFYGWFKILK >gi|257441660|gb|ACYG01000027.1| GENE 378 426247 - 426501 360 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460845|ref|ZP_05625946.1| ## NR: gi|257460845|ref|ZP_05625946.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 13 84 1 72 72 77 98.0 4e-13 MSEQPTVQPQSNVLGILSIVFAILGIFFLGIVFVPLAFLCAIAATYQAVKKQASLVIAIL AWILTIVGLMTSPVLLATIGISAS >gi|257441660|gb|ACYG01000027.1| GENE 379 427220 - 427639 657 139 aa, chain - ## HITS:1 COG:Cj0138 KEGG:ns NR:ns ## COG: Cj0138 COG0779 # Protein_GI_number: 15791526 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 2 139 1 140 140 149 52.0 1e-36 MVDLEALARECGVQLYDVETVSENGRTIYRISITKAGGVGLDDCERLSRLLSPIYDVEPP LEGEWTLEVGSPGLERKLSKPQHFANSVGELVRLSCTDGQKLSGEVLDCEGGVLRLRTDG GEVSVRLDEIKKARTYVQW >gi|257441660|gb|ACYG01000027.1| GENE 380 427632 - 427997 578 121 aa, chain - ## HITS:1 COG:Cj0137 KEGG:ns NR:ns ## COG: Cj0137 COG0858 # Protein_GI_number: 15791525 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Campylobacter jejuni # 1 116 1 116 120 157 65.0 5e-39 MNPTELRRLRTQSVLKQLIPEALASLEDELLRGLCVTDVECKRGRYDAFVYLDKNAFDER EQEFVLEKLGRVARYLQNFCAEAEGWYRCPAFHFKFDDRLEYQNKMDDLFDKIEEELRKN G >gi|257441660|gb|ACYG01000027.1| GENE 381 429090 - 431798 3788 902 aa, chain - ## HITS:1 COG:Cj0136 KEGG:ns NR:ns ## COG: Cj0136 COG0532 # Protein_GI_number: 15791524 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Campylobacter jejuni # 165 901 128 871 871 919 72.0 0 MGVLIKDIADELGYASKEIIEKAQEMGFKKVKTASNKVSEEEAAAIYDYIQTGILPGKKS KPAKKSSEKAQEDENKPAKKQSETKKTAKKESPKKAESLKASGSKESAQSAKEPSDEKTR TQEPEVKTEKSQNQKEEISSAPQEKEEKQNAASKPAPVQINSGDSIANESLQKRRGLVIV KKKKEVQVPAAQDRTEPRREKISASLEAIFSNAELNLKKKKIEKKKAPAAKKEDALKIDI IPDHEMADIVIEDEDVVVMPDFTVKPIQTENRTKSKNQPNIYRASQNQIFSSEGGISRGG RKKHKKAPREQGSEIVSSVNIPKEIRVYEFADKIKKQPSEIIGKLFALGMMTTKNDFLDE DAIEILASEFGIEVNIIDEAQEFDYIKAYEDSEGEENLIARAPVITIMGHVDHGKTSLLD YIRNSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTSMRARGAEVTDIVIIVV AADDGVKPQTKEAIAHAKAANVPIIIAINKMDKPNANPDLVKTGLAELDIMPTEWGGSYE FVPISAKTGDGIENLLEIVLLQADLLELKADPSKQAKATIIESSLQKGRGAVATVIVQNG TLHVGDTVVAGIAYGKVRALSDDKGRALKQILPGECGVIIGLSEVPGAGETLIGVSSDKE AREYASKIYEHQRQKELSKSTKVTIDELSAKIAEGSLKSLPVIVKADVAGSLEAIKASLE KLRNDEVKVDIIHSGIGGITQNDIALASASENCVILGFNVRPTGEIKELAKERGAQIKTY NVIYNLIDDIKALLGGLMSPIISEEALGQAEIRQVINVPKIGQIAGCMVTDGLIARGAKI RVIREGVIIFEGNVSSLKRFKDDAKEVAKGLECGVGIEGYDDMRVGDFIESYKQKEEQAT ID >gi|257441660|gb|ACYG01000027.1| GENE 382 431782 - 432009 188 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460854|ref|ZP_05625955.1| ## NR: gi|257460854|ref|ZP_05625955.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 7 75 1 69 69 128 100.0 2e-28 MSEPIRMCVICKGRFAKRELHAFLQNFKNISSNRQFYICDGCINQKEKISKYLSKFASSA DLGHIKERVLNGCSD >gi|257441660|gb|ACYG01000027.1| GENE 383 432031 - 432912 753 293 aa, chain - ## HITS:1 COG:Cj0134 KEGG:ns NR:ns ## COG: Cj0134 COG0083 # Protein_GI_number: 15791522 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Campylobacter jejuni # 1 292 1 291 292 313 58.0 2e-85 MIIRIPATSANLGPGFDALGLSLGLFNEVEITEQKFFCVSLSGEGSDRAWLKKGNAFLNI FNEIYRKLGGRQEINFKFAFHNNIPFSRGLGSSSAVIVGAIASAYKICGFEIDRAKILNT ALEYENHPDNIAPATLGGFVSSVVDGKTVRTQKCEISQDLQAVVVIPDTPMPTNESRGRL PKSFSIKDCVSNLSHAAFLSACFMRRDYDSLRYACIDKMHEQMRMGVLPQLFEVREIAYA NGALMSSLSGSGSSFLNLAYRSDAAKLKACLSENFKNFRVEILDIDNGGFNID >gi|257441660|gb|ACYG01000027.1| GENE 384 432921 - 433319 334 132 aa, chain - ## HITS:1 COG:Cj0133 KEGG:ns NR:ns ## COG: Cj0133 COG1214 # Protein_GI_number: 15791521 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Campylobacter jejuni # 1 132 4 133 133 114 46.0 4e-26 MYENGAKIAEFASAEGEKADKFLVAKFSEILKTYKIKELIYANTPGSFMGMKVSYVILRT LSIALDVPLYAISGFELSGFGPIRANKNFSYVYENGEIKMKKCAPAALSLPQDLSVLNKS DDILPNYIIEAV >gi|257441660|gb|ACYG01000027.1| GENE 385 433383 - 434267 755 294 aa, chain - ## HITS:1 COG:Cj0132 KEGG:ns NR:ns ## COG: Cj0132 COG0774 # Protein_GI_number: 15791520 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Campylobacter jejuni # 1 294 1 294 294 420 68.0 1e-117 MRQTTIAKKVHNVGIGLHKGEPIRLTLEPLEAGSGIVFYRSDLGVSFKAEPKNVINTQMA TVVGNEKGYISTIEHLMSAINAYGIDNIRIIVDANEIPVMDGSSASFCMLLDEAGVRELD ANKKALIIKRAVEIREGDKLVRLSPSKSPKFDYTIKFSHPLIGTQHHVFEFSKKAYLKEI SRARTFGFLKDVQALRSMGLALGGSLENAVVIDENKILNPEGLRFENEFVRHKILDAIGD LALVGAPILGDYTAFAGSHDLNHKLTLAVLADAKNFELVDLTAEVVREYQKVFA >gi|257441660|gb|ACYG01000027.1| GENE 386 434318 - 435697 1099 459 aa, chain - ## HITS:1 COG:Cj0131 KEGG:ns NR:ns ## COG: Cj0131 COG0739 # Protein_GI_number: 15791519 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 35 455 31 453 457 406 49.0 1e-113 MRRNGNGTKLKILIFLIIICALVYGIFRIFTSPKFEKNPPQIALENEIYWNLTSPLKIKI SDDTGIKVVRVNLNDGASTIPLLNEELNVPQTTLELAVQFPKNLMLNKDKNYKLEVFAND ISSWNFAQGNKSVKTANIIIDDKKPLINIINQSYKITKGGSAVVVFSAKDERLNEVYVKT NYGKIFKAIPFVKEGYYASLVAWPANLEEFRAEAVATDRAGNESISQIKYFYQDKKYKVS TIKLNSGFINGKVSDLASQYAQNFNSMSDLEKFKFVNETLRKKNGDDLHAATSAVHEDKI NGFELKPFYPLAKGAAVASFADHRIFFMNDEQVSESWHMGLDLASVANADIKESNYGKVV FAQENGIFGLNLGIYYGFGLYGIYGHCSATQLSVGSDVKPGDILAQTGSSGFAFGDHLHF GIVVQGVDVRPEEWMDPKWMKDNITDVLESSKKVIEKGK >gi|257441660|gb|ACYG01000027.1| GENE 387 436253 - 438466 2515 737 aa, chain - ## HITS:1 COG:Cj0129c KEGG:ns NR:ns ## COG: Cj0129c COG4775 # Protein_GI_number: 15791517 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Campylobacter jejuni # 1 736 14 739 739 760 53.0 0 MACAAQIKSIKFEGLRHLSPQVAQQISGLKVGDELNGENTNAAISKLFEQGYFSDVYISE QGGAVTINVTEKPTIAKVEIKNVVTNDRDKINELIGLRPGQVYDEVAAKKAETRIKQYYE VKGFFDTVVEFYPKPINDDKSVILLTIEVNRGENIIIDKVNLVGADKLDYDDIEPSVANK ERETLGWMWGFNDGKVKTAELPNDANRIQEEYYKKGYLDAQVSAPLLNADMDNYTADLTY YISEGEQYTVSSVDIEYPADIIKLDKEKVLDDFKLQKGDTMNSERLRRDMNTLETLVADQ GYAYVRIVPKTKQDKEARTVAITYQVIPEDKVYIRNVTISGNDKTEDKVIRREMYLTEGN LYSKTDYNDSLNSLKRTGYFDEVEIKENRVSNDQIDLEVAVKEAPTGSITGGIGYGSEDG ILLSGGISDRNVFGTGLHGAFSVEKSDDQLSGRLSLTNPRVFDSEYSLGGSIFANDYDWD DYDEKSYGFSITGGRKIGRNTDVSLTYYLEKSEIKGLNEYYAKAGYLDGKNLKSSIIPSI TYNSTDDYYLPRSGMIASASLEYAGLGGDMDYTKARGSFNYYFGLRDYIDHDIIFRYKAA TGYMWEGNKKIPINEKLFLGGMKSIRGYEGRSIPKKEICLNANNCRYIETGGMQSFNNSF ELSFPVVDRLKMRFVTFFDYGMIGDHDWNEEERYSTGAGIEWMTPMGPLQLYFVKPLNKK PHDDTNSFEFSIGARFN >gi|257441660|gb|ACYG01000027.1| GENE 388 438589 - 439419 858 276 aa, chain + ## HITS:1 COG:Cj0130 KEGG:ns NR:ns ## COG: Cj0130 COG0287 # Protein_GI_number: 15791518 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Campylobacter jejuni # 1 276 1 275 275 316 62.0 2e-86 MKIGIIGLGLIGGSLGLCLKSTKIISAVYGCDISRENEKEALRLGLVHEILSLEQMKQSC DAIFLAIPVEAIIETLQKLSDCRSETTIIDLGSTKFKILQNCPPQIRRNFIAAHPMAGTE NSGPQAAFKELLNGAVVVICDDHGADEVHIKRAVEIFSFAGMKIVFMDAKSHDHHVALIS HLPHAISYSLVNSVLKEENRRNIINLAGGSFSGMSRIAKSSPQMWVDIFKQNRTNLLGAI DAFKNELDLCVGMIRDERWDELEAWMYEARKLRDII >gi|257441660|gb|ACYG01000027.1| GENE 389 439528 - 440259 662 243 aa, chain - ## HITS:1 COG:TM0742 KEGG:ns NR:ns ## COG: TM0742 COG0639 # Protein_GI_number: 15643505 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Thermotoga maritima # 5 240 3 204 209 84 29.0 2e-16 MENIYIIGDVHGCYRSLLALIEQLPHKFDSKICFVGDLIDRGPASADVVELVSTRGYDAV MGNHEKRFVGNAKTALRCAKTGKFTNSNDPYAFFSLDESWLFNNGGEATLASYYRHGGVK QCKEHLRFVSRLPIYLEYDLRDESGRALVVSHSAVGRAWGIRHDAERAKSFAAHVLSGRG DDSANDGIFNVYGHTPVKKPVITEFSANIDLGCVYKKHWGEKARLCALEFPSKKIFTQEC IDF >gi|257441660|gb|ACYG01000027.1| GENE 390 440372 - 440809 233 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|223040831|ref|ZP_03611097.1| ## NR: gi|223040831|ref|ZP_03611097.1| hypothetical protein CAMRE0001_3103 [Campylobacter rectus RM3267] hypothetical protein CAMRE0001_3103 [Campylobacter rectus RM3267] # 1 139 1 147 147 68 36.0 2e-10 MIILKIIACAFSMSFCLMNISSLGDFVVWRIFDTSSVWDDDPIEWLQQKCVYFIFLWISF CGVCAVLAVKLKDFGKLADFFVNLFLPIVAIWILSPYLGIIIAAVCISDTNLVDFYSALL SALISIVLFMIVVAEVLKQIYPPKS >gi|257441660|gb|ACYG01000027.1| GENE 391 440832 - 441758 391 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] # 8 308 36 345 353 155 34 3e-36 MTEDFFKKDPLFLAPLAGFSDPPLRGVVKKFGCDATVSEMISANALVFEGEKTLKMLEKN AAETPFFVQIAGSDAEIIKKAVLLINKFDGIDGIDLNCGCPVPKVVKQGAGSALLLDLPR LSRLVETIKKYSNKKFTSAKVRLGFSAVDIENIARAVQSAGADFIAIHGRTRAGGYSAAV DYGAIARAGRVLQIPVIANGDINSANAPAVRDLSGADALMIGRAVIGRPWIFREIKTGEQ ASDALKKEVVLYHFAQMLSHYGVRGVAIFRKHLHEYSKGRENAASFREQINHVAAESETT RLIEEFFS >gi|257441660|gb|ACYG01000027.1| GENE 392 442299 - 443300 1256 333 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0534 NR:ns ## KEGG: CHAB381_0534 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 332 1 329 330 335 53.0 1e-90 MKTKQFFLYSIVYIAIVAILVFTQQSSSYTLGLFGFTLTLPVAVWIVLPLILYMILAIFH IVFHSFAFYRTKRAIAKDLSAYDAMSKEVLLGLDTNKDFKTEYFKDPSELTKILSPWYDS TGIDVKNEDLKEVIGVIEKVKNGEVADLRKYKLPKDNGLFLQNELNRLDAEPAYAYEILK TKGVYSENITKKAYAVALAKGSYDKIKAYKIPQDIAEVNILVDRAVNDASFEISSEELFD LVNNEKFNEQDFIGFAKKLKNHLAPEQYKAFFERLKNENQEATEAYLYALYELGMIDEFR EQLSLADGDEFEKFKILLFLRDNGKNVPASLLF >gi|257441660|gb|ACYG01000027.1| GENE 393 443303 - 443659 451 118 aa, chain - ## HITS:1 COG:Cj0125c KEGG:ns NR:ns ## COG: Cj0125c COG1734 # Protein_GI_number: 15791513 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Campylobacter jejuni # 1 117 1 117 120 89 41.0 2e-18 MKKNELKFYKKILEEKREQLIANINSSVNEISELRENKAADDFDVASMNTDLSIEYSLNV NQQKAFLEIESALKRIENGTYGLCESCGEQISLERLKVNPEARLCISCKEQAEKQNRS >gi|257441660|gb|ACYG01000027.1| GENE 394 443669 - 444049 321 126 aa, chain - ## HITS:1 COG:Cj0126c KEGG:ns NR:ns ## COG: Cj0126c COG1576 # Protein_GI_number: 15791514 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 1 126 28 153 153 132 51.0 1e-31 MAAKFAAVRDETFFNANIARAQAASRELALRAYDEAYLPRLSGYVVALDERGQALDSVEF ASMLKDKSAVSFFIGGAYGLSENFKAKADKIISLSRLTLAHKIAKLLLFEQIFRALCINA NHPYHK >gi|257441660|gb|ACYG01000027.1| GENE 395 444121 - 445020 1041 299 aa, chain - ## HITS:1 COG:Cj0127c KEGG:ns NR:ns ## COG: Cj0127c COG0777 # Protein_GI_number: 15791515 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Campylobacter jejuni # 1 278 1 278 280 420 72.0 1e-117 MNFGDLFSKIRRTQPAPSEAPTHWIKCPGCGALMYSKEVEQNHSVCPKCNYHLRFDAQAR IDLICDEGSFVEYDQNLQPVDPLKFVDKKSYKKRISESKEKTGRFSAVIAGEGAISRQKI QLVVFDFNFMGGSLGSVEGEKIVRAVKRSLDKNEPLIIVSASGGARMQESTFSLMQMSKT SAALKILSEHKIPFISVLTDPTMGGVSASFAWLGDIIIAEPGALIGFAGQRVIKQTIGAD LPEGFQRSEFLLEHGLIDAIVPRAEMRQYLSDIINVLSKNAVQIDDTSDKSLHEEGSEE >gi|257441660|gb|ACYG01000027.1| GENE 396 445114 - 445728 524 204 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1258 NR:ns ## KEGG: CHAB381_1258 # Name: not_defined # Def: putative recombination protein RecO # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 204 1 204 204 274 60.0 1e-72 MQGFILKTTKVRDEDCIVDVLSESALVRAYRFYGARHSNIIQGYKIDFELSQNQNFLPRL SGVMHLGYAWLGNREKLLFWQQFMRLLHAHLKDAEHLDKFYYELLSRAAARFGKQNPRRI IVESYAEILKFEGRLHDEPYCFLCDEEILENIALCRGFLPAHEHCAQRAGFAQDEILEFL RSKKTLNLNDETVGYLYDIVAEGF >gi|257441660|gb|ACYG01000027.1| GENE 397 446017 - 446703 367 228 aa, chain - ## HITS:1 COG:lin0088 KEGG:ns NR:ns ## COG: lin0088 COG0338 # Protein_GI_number: 16799166 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Listeria innocua # 1 225 22 252 270 92 28.0 5e-19 MAPHQKYIEVFGGALSVFYRKEPSKIEILNDINGDLINLHRIIQTRPQSLNSCINGLLRS REIFYAIKHRTIKPRNKIEAATFFYFQIAASFGAKGDHFAMPKGRSAKNIYRDFCVYSRR LKRATIENLSYEKLIKEYDGEDSLFYLDPPYVGTENYYKTADGFSRQDHESLAEILRSIK GKFMLSYNDCELVRELYKGFNMKELKISYSLNNAAERKNSKELLIMNY >gi|257441660|gb|ACYG01000027.1| GENE 398 446831 - 447247 466 138 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_2458 NR:ns ## KEGG: Pecwa_2458 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 2 127 5 131 148 92 40.0 5e-18 MVLEIVRFKEIDDMTLGRFVLRDGEREVLKGYTCEPAGPDTTQSGMDRRIPQGQYQIAWH ESSKFRARLPLLYNEQVPKSRCILIHAGNTGSNTEGCVLLGSSLGTHGVKDSRAALSALL ATVKGQEFIVKIKNEIER >gi|257441660|gb|ACYG01000027.1| GENE 399 447259 - 448257 749 332 aa, chain - ## HITS:1 COG:RSc1912 KEGG:ns NR:ns ## COG: RSc1912 COG3500 # Protein_GI_number: 17546631 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Ralstonia solanacearum # 4 331 13 360 374 72 23.0 1e-12 MVRKPSFKLEANGKNITDAIKRNLLNLNFDDKEGFKSDEISFQVFGIYAKPAFGDKLKLW LGWANDLSSANQESGLYFCGSFSVQTVSRDYKAKTTEVRATAVNFASPQKDKKRCSWENT SVFAIAGKIAEQNNLNLKTTGADQPVMSELQDGISDIEFLYTLCFKLGYKAFIKNDTVIV TPKEAKGDETQTSGTSKNNNLPEFSINLTDLSSLEITEANRNSYTAVILEWQDISSGKTK SIKVGKGEQVYKMQIPEPKSDNEAFKHGEAKLNELQRGGISGRCETLGANIVAGGKLKFK DALGLEKSEFTIKSVSHKLSVENYSVEIEFEG >gi|257441660|gb|ACYG01000027.1| GENE 400 448251 - 448436 172 61 aa, chain - ## HITS:1 COG:no KEGG:CJE0253 NR:ns ## KEGG: CJE0253 # Name: not_defined # Def: tail protein X, putative # Organism: C.jejuni_RM1221 # Pathway: not_defined # 2 61 4 63 63 62 53.0 7e-09 MIYKAKDGERLDQVVYKYYGHLKYFEQVLELNAKLDPILKAGDIVLLPEIEKATKEQAKL W >gi|257441660|gb|ACYG01000027.1| GENE 401 448426 - 448800 304 124 aa, chain - ## HITS:1 COG:no KEGG:CJE0252 NR:ns ## KEGG: CJE0252 # Name: not_defined # Def: phage tail protein, putative # Organism: C.jejuni_RM1221 # Pathway: not_defined # 1 123 1 123 124 91 34.0 9e-18 MVLNIGGFKFEWKQTLGIDMQTDFSIESIDRIENHPTLLSAALESQTISVSAQTLPFRND GQNALKALYILAATRQSYPLVGGNGRYFGRFAIIKISEKRAIFTPNGAFLTQNFTMELKR DYDI >gi|257441660|gb|ACYG01000027.1| GENE 402 448802 - 451129 1336 775 aa, chain - ## HITS:1 COG:XF0730 KEGG:ns NR:ns ## COG: XF0730 COG5283 # Protein_GI_number: 15837332 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Xylella fastidiosa 9a5c # 5 636 34 651 739 193 24.0 1e-48 MDSTQIGISISLITKGFSVLSGDVKRLNALSESLKKAGRDVTELNQKISKIKSFKEKIGI NQDKILGEFSHFQSRLAAVGSFGLPLKLAIDYEDAFADIKKVVDFKDEAEKEAFSNELLR LTQIIPLTAKELTQIAAAGGQMGISKDELLDFTQMVAKVATAFDMSADSAGESIGKIKNI LNLDLSGTKDLMDVINGLSNSNPAKAGELVDVMKRIGAQGKQIGLTKEQTVALGSAFISL GKVPETASNAANKLMKTLGNISTSSEKEKKALAELGFDVDFIQAGMKTDSKKMMMDFLRA VKNIEDSKRGAILNTLFGDNYDTDIATLVGGLDTLEKAMNDVTDPAKFKNSSDTEFQNKA NTTLAALKRFRGAWTAIGIQIGNAFLPVLNTVTSFFSAVAKFISYFLKEFPRLSKVIFGI VGGFLAIVTLAPMFRILGWSIGILINQARILGTAFSFLIKVFRLKWLATLKLNLAYIAVT AQTKATAAATWIANTASKAYAFTTGILSKALAALKAGFAAAGLGAKILRIALISTGIGAI AVGIGIAAAYIIEHWDEVKAFFMGFWQKIQPYWESIAAWFEKVWSTVANFFSSVWDSAKA LFSGSWDGIETRFSAAVETIKAFFSPLTDFFSDIAKSISAAFDWVIDFWKNTFGSFFDWI GEKVNWMKDMARSVKEFFGFGEDMDTPQKSAINLFGQNARGELADINKTYAGQTRSAVLK TADGREVNVNFSGNFNLHSNDGKFDLQSFKSQVTRGVQDALRRDELNSQNTDVRG >gi|257441660|gb|ACYG01000027.1| GENE 403 451561 - 451824 397 87 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_1799 NR:ns ## KEGG: CFF8240_1799 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 4 87 19 102 102 109 59.0 4e-23 MAKAKSNVVEENGNQYTVIALSDGREIKIRHPKGKDLRFAMNGSGGNDADIVFKLSSTLT CLSLDELDELQAKDCSLIIKEVAAFLA >gi|257441660|gb|ACYG01000027.1| GENE 404 451842 - 452357 517 171 aa, chain - ## HITS:1 COG:no KEGG:ICDCCJ_692 NR:ns ## KEGG: ICDCCJ_692 # Name: not_defined # Def: phage major tail tube protein, putative # Organism: C.jejuni_ICDCCJ07001 # Pathway: not_defined # 2 169 1 167 169 140 42.0 1e-32 MLRRQVPQAIQEGNVFINGQGYLGVTKKLKIPMIEFETIEAKGAISANYSAGIIKPMEVE FTISVLDKNMLAAIGLNSFTSRIPFLFKASIHQSGKDGPVPFSAAFTGDITSYEVKEFES GNEMEITIKLAANFVDINVDSVPMVLIDVENMICRISGIDYMASVRSNLGE >gi|257441660|gb|ACYG01000027.1| GENE 405 452390 - 453553 780 387 aa, chain - ## HITS:1 COG:PA0622 KEGG:ns NR:ns ## COG: PA0622 COG3497 # Protein_GI_number: 15595819 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Pseudomonas aeruginosa # 6 362 6 363 386 147 30.0 3e-35 MAAKFGVNITVSAEAARPISVESTTPIGIAGYEEVLGNGLHFYMTTDKAITALEEIYEAK KKASEQFKKGSIYRALKAISDQSVQTQIILSVFSRTDNNDDSDDITACKAAIEAFKNAKS ATGYRPNLLIAPEYSGEDAIKAALEAMATRLKATGIVDLKASAANEAIAKMKDFGTARLI AAYPYVKIWDDETNGYVMSPQSARIAGMIAYVDGLSEFGYSDSYSNRVMGGISGTAIDVD FEPGETCTADELRAAHISTVIREQGFRAWGGETSDVDSIWQDLARVRIFDRISQACQRGV FFAIDRKADQLYHAKRSVDELLRALVGARVLLGYELSWSAKNTLANITAGKFYLDVRMQN NPIVKQLTLDFIYVDSYGKALMDSLNA >gi|257441660|gb|ACYG01000027.1| GENE 406 453674 - 454213 452 179 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460883|ref|ZP_05625984.1| ## NR: gi|257460883|ref|ZP_05625984.1| hypothetical protein CAMGR0001_1652 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1652 [Campylobacter gracilis RM3268] # 1 179 1 179 179 311 100.0 9e-84 MFWLLNRLRGSYNYFAKVNAIYLAAIIYLSTKNIYASILCGLGYILGESFGWGVWVGALI THSGFKDERENRLIERGAARLFEPKTHWLAYCRLCLFLRGLLWWLPVFVPLVFAGLYGAP LLAVLLAAGFPLACELGYRTHFKFRLKKFEVNTAWARQELFYGAMQDLAFTAIYLISKF >gi|257441660|gb|ACYG01000027.1| GENE 407 454218 - 454475 254 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458664|ref|ZP_05623791.1| ## NR: gi|257458664|ref|ZP_05623791.1| hypothetical protein CAMGR0001_2767 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2767 [Campylobacter gracilis RM3268] # 1 84 1 84 84 134 69.0 2e-30 MSYVIITVLSLVVGIIACPFIIFLRARKCDQWDKSNMMNILRVFAHLATHPDDFAKMQYA DGKKPFWYLSGDEFADVVKTRPEDK >gi|257441660|gb|ACYG01000027.1| GENE 408 454475 - 454963 568 162 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0024 NR:ns ## KEGG: CCV52592_0024 # Name: dhs # Def: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase # Organism: C.curvus # Pathway: not_defined # 36 162 54 181 186 70 31.0 2e-11 MRYFLKNNDVYAYDDEQIALGYAEGLKELTEEELQEKLAPSIDQLKEGKTAALNEWYKNM TENFKVNIKDFGVVEGGYKALVQIQAIIDTSDDLAVRAYPLANGKMAKVSGVEDIKKIKK ALQRAITGLNALKTIYEAKISKAKNSADIEKIVFADTVQETL >gi|257441660|gb|ACYG01000027.1| GENE 409 454979 - 455797 952 272 aa, chain - ## HITS:1 COG:no KEGG:GBP346_A2705 NR:ns ## KEGG: GBP346_A2705 # Name: not_defined # Def: GP26 # Organism: B.pseudomallei_MSHR346 # Pathway: not_defined # 1 57 1 57 487 82 63.0 1e-14 MANIKEEKTWEEGIYQLEVTDPVVGGIDGISNKQAKQLANRTRYLKEQIKNNKSSMDTAL ATKRNVTDSYSKTQTDEKFLKIGDYGLGGVDNMPILNNLDDFTTKTGIYRTVEDRTTGTP PATWSKIRHSSVIVERVDQNWIKQTMTYIDSEHIPLVWYRTNKSNTIWHSWTCLNPLGVG QTWQEVTSQRLKGVIYTNTTGRPILVCATDYNGNGGGSSVIEIDGADRGVIMGGTATQTS CTVIVPVGSTYKVKDNVPTPGSENYYRCHELR >gi|257441660|gb|ACYG01000027.1| GENE 410 455790 - 456344 552 184 aa, chain - ## HITS:1 COG:no KEGG:B565_2477 NR:ns ## KEGG: B565_2477 # Name: not_defined # Def: tail fiber protein # Organism: A.veronii # Pathway: not_defined # 9 181 292 470 471 96 33.0 4e-19 MSILPSGKPKFDKKLDDLFGLSLAGLDIGVINTLADSCPASLLGILADSLDINIDGLNET GARLLIKEAFKIHYYSGTFYAVKKAVNAIDSGAIIVEGNLGQKYDGSIKHDRSRFYGSNS HWAEYSIISSVPLSKSRAAAIATAAKAAAPAKCVLALIEHQASQITYNGQIKYNEQFNYG AYNG >gi|257441660|gb|ACYG01000027.1| GENE 411 456341 - 457426 953 361 aa, chain - ## HITS:1 COG:STM4202 KEGG:ns NR:ns ## COG: STM4202 COG3948 # Protein_GI_number: 16767452 # Func_class: R General function prediction only # Function: Phage-related baseplate assembly protein # Organism: Salmonella typhimurium LT2 # 49 340 41 349 371 98 27.0 2e-20 MSFLKNLPYPNVIEQLSYDEILKAVKGLFKGHLNDDEIALLESDRFSALLETLAYRELFL RARINSTVKSMLLPFAQGADLDNIVAMYGIARKKGERPVAEVEFTLSMARDSDVLIPKGT ILCASSGELAAIKDDITIAAGQLKGTGHSVLQTFVKQSDLKCELIQTPFSFVLKARQTSR FEGGADEESDERLRDRAVLSLERFSTAGSRKAYIYHALSANAKVEEVSVINGGPGIVKLY LKTADMSEETRVSVQSYIGGERVRPLCDTVVVENAKIINAVIKAELELKDMLLQASIQSE IEAGRTSLSLGEDLNLSYIYSTLHREGVYRVNLKQPAADIKADVDSFVKIKFELSFAKAV L >gi|257441660|gb|ACYG01000027.1| GENE 412 457423 - 457710 390 95 aa, chain - ## HITS:1 COG:PA0617 KEGG:ns NR:ns ## COG: PA0617 COG3628 # Protein_GI_number: 15595814 # Func_class: R General function prediction only # Function: Phage baseplate assembly protein W # Organism: Pseudomonas aeruginosa # 5 95 15 106 108 58 31.0 2e-09 MSKYLISIEDSIKDILSTPIGSRVMLPQYGSRLFELIDRRVNDEFRADLSYFVIEAVQRW EKRVQIDEVKLISLRDHKLSFKILLTNGKEIGVEI >gi|257441660|gb|ACYG01000027.1| GENE 413 457712 - 458317 761 201 aa, chain - ## HITS:1 COG:no KEGG:ICDCCJ_684 NR:ns ## KEGG: ICDCCJ_684 # Name: not_defined # Def: baseplate assembly protein V, putative # Organism: C.jejuni_ICDCCJ07001 # Pathway: not_defined # 5 195 1 199 210 178 50.0 1e-43 MSNNLNEIGIVSEVSGDRARVAIGLLVTDFLPVFQPFANSFATGFAPIRVGEQVLVLPVR GELNVGVILRGIYQSAHRAAATDKKIHASFEDGVSFSYDTASSTLEISSPKQINITCENA SLNAKSVNVKADDTTIQSGNIKLLGNTLIQGSISTAGSDGGSGSFSINGDLNITGSLKTS GDISDGRGSLSSHTNGGVARD >gi|257441660|gb|ACYG01000027.1| GENE 414 458307 - 458600 247 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460890|ref|ZP_05625991.1| ## NR: gi|257460890|ref|ZP_05625991.1| hypothetical protein CAMGR0001_1659 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1659 [Campylobacter gracilis RM3268] # 1 97 1 97 97 179 100.0 9e-44 MEYLLYILAAGVAGSVTAFLKYGERGAGNFIKRVLDGCFSAYIVYEISFFFCKDMRLSLA ICGIGAFKGSGILDLAVGFIRNKFDLDDRNKDEQYEQ >gi|257441660|gb|ACYG01000027.1| GENE 415 458604 - 458786 88 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460891|ref|ZP_05625992.1| ## NR: gi|257460891|ref|ZP_05625992.1| hypothetical protein CAMGR0001_1660 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1660 [Campylobacter gracilis RM3268] # 1 60 1 60 60 82 100.0 7e-15 MKALICLLRAFVLVVFNLELYVVFDNFIRSENLVLLLWSLCIGIAGALFSPTLLYKTFRV >gi|257441660|gb|ACYG01000027.1| GENE 416 458786 - 459007 252 73 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0274 NR:ns ## KEGG: CHAB381_0274 # Name: not_defined # Def: putative lipoprotein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 6 69 7 73 79 65 50.0 6e-10 MHIKNFLIALFSVLCLFGCSTKEPQIKQVYVPVRCNLKMPLKPAANGNFEAHKELVRYFL KCEEIAKDCTRSE >gi|257441660|gb|ACYG01000027.1| GENE 417 458973 - 459284 396 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460893|ref|ZP_05625994.1| ## NR: gi|257460893|ref|ZP_05625994.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 103 1 103 103 160 100.0 3e-38 MGFLLNIKFILAAFAVIAVLCGAEILSLKSDVSQLSTENAGLKAKLQQCELNLSLQNAAI KSLEVNASRRNEDKIQSVSKIYVKDKSCEAQLNAYKKLLDSAF >gi|257441660|gb|ACYG01000027.1| GENE 418 459262 - 459705 525 147 aa, chain - ## HITS:1 COG:no KEGG:mma_2188 NR:ns ## KEGG: mma_2188 # Name: not_defined # Def: hypothetical protein # Organism: M.massiliensis # Pathway: not_defined # 3 139 5 131 146 62 31.0 5e-09 MSLIANIKENEGFCGEIYEDTRGYKTIGYGFLVAALSKNELALNGGKVEPMSREAADQIL ELKLKKLKPRVFEAFAWLQDKPQNVQDVVIEMCYQMGVVKVQKFVTTLHHIRMGEYEKAI TNGLRSLWAQQTPNRAKKVLNGLLAKH >gi|257441660|gb|ACYG01000027.1| GENE 419 459749 - 460069 424 106 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460895|ref|ZP_05625996.1| ## NR: gi|257460895|ref|ZP_05625996.1| putative zinc finger protein 131 [Campylobacter gracilis RM3268] putative zinc finger protein 131 [Campylobacter gracilis RM3268] # 1 96 1 96 106 125 100.0 1e-27 MKYFALKNICAGGNFVREGEYVELGGEVAAEYLSVGAIEQAESLELDKTQTDEPQAEGAA QELQPDIDKASSEVAGQQPTESESQAGQAEKTAPDEAAAKKNKGKK >gi|257441660|gb|ACYG01000027.1| GENE 420 460079 - 460972 1102 297 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0652 NR:ns ## KEGG: CFF8240_0652 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 3 295 4 300 311 264 46.0 3e-69 MNNLSEILKGSINAQNVTLSGSLTPAQAHNFVDAIKNNNGFLSKIHTEKMGRLTKELDAW DVAKGILVRVASGEKPTEAQRAALGKVGTKLDAKGVQLFARILQDALEDNADNPNFETET LNAFTKAFGNDLALLGFIGESDTYDGTFKKLHKGWIQVAKDASDTTKLTYASSDKVSDRL GALVGSINSDILGESVVLINPADAQAYNKELSALNSPIHLIQGGADKILGVPLEITPLMP KGVYMATPLKNLVLGMGLDVRRNRWYDAEERALKYVFDLYTDYEIVIKRWVSLATAA >gi|257441660|gb|ACYG01000027.1| GENE 421 460969 - 461745 937 258 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0651 NR:ns ## KEGG: CFF8240_0651 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 1 245 1 233 245 139 39.0 1e-31 MAKEITDLQIHLISLVNAGANNKTVIYKDKNFEELLRVSFSKDSAGEEGIVYGIVYAPDE VDSQGEFANAAEIKKAAYDFMKRADLSYCVDVNHDLRPAPAYICESWIVKEKDAFFSETG AWAVGIKLEDEDLRARVKSGELSGLSMYGSGVIKSGDGTGKEGGMLEAVRQGLREFFSKK DESGATPQGVVSNKTEKGEEITELIKAKTAASDEKMANLEKSLEDLGVKLGALQEQINKS AQDTSVSKQKTSGSEGIL >gi|257441660|gb|ACYG01000027.1| GENE 422 461923 - 462939 1016 338 aa, chain + ## HITS:1 COG:STM2723 KEGG:ns NR:ns ## COG: STM2723 COG5518 # Protein_GI_number: 16766036 # Func_class: R General function prediction only # Function: Bacteriophage capsid portal protein # Organism: Salmonella typhimurium LT2 # 18 299 47 335 346 77 24.0 3e-14 MDRIFKAAAEASAQIKDETVGADGIIEPFCAPEHLLGLFYANTYHRRAIQLKASLLSNVQ DGKALEGMAGTPKDFLYAFILNLEIFGNAYLEIAGRNLYILPSVEARVDKNKEVFQVKNG RKIALNARQLAYYSPMSRYYGEPDYLGALLAIMTNQKADSFNNAFFENSARADTAIIFEN SEPDEAQLNAFRDFFGVNFKGHQKAHKTLVLTANGENAKVRIEDLSKVEDISFEKLKNLN RDEIIAAHGVPPRMMGIINASQLGGGGEVAQQLHSFNELTIIPKQKQIEWFFDSLGFKIK LNPIDVSSFKDDGELMSSLVASGILSLAEARGILGYDK >gi|257441660|gb|ACYG01000027.1| GENE 423 463133 - 463459 424 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460899|ref|ZP_05626000.1| ## NR: gi|257460899|ref|ZP_05626000.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 108 1 108 108 176 100.0 4e-43 MDEILNEIRRYNKLKMISDEEIIPYIEMAEYEIKKYDISGLNLIKAKAYMSLALLGQKLW LKIQQRANEYDESLETFKDVKQWEEYWMDKFYKLTTKKNTNGYFYAAV >gi|257441660|gb|ACYG01000027.1| GENE 424 463469 - 463783 546 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460900|ref|ZP_05626001.1| ## NR: gi|257460900|ref|ZP_05626001.1| hypothetical protein CAMGR0001_1669 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1669 [Campylobacter gracilis RM3268] # 1 104 1 104 104 178 100.0 9e-44 MDLGEKITTEKALIALCEELILKHEDDYKVFVSERSALNLTQYRVNLSVIVPIASGETVL KELMRLTPLLSFTGSSVDATDERGVDILNFTFTLDFLAMASLDE >gi|257441660|gb|ACYG01000027.1| GENE 425 463783 - 465339 1305 518 aa, chain + ## HITS:1 COG:DRA0094 KEGG:ns NR:ns ## COG: DRA0094 COG4373 # Protein_GI_number: 15807762 # Func_class: R General function prediction only # Function: Mu-like prophage FluMu protein gp28 # Organism: Deinococcus radiodurans # 114 501 3 443 458 112 25.0 2e-24 MYSKKTKELILNLLHSGYAASELAKSYGVNAATIARWRKKGAEEGGAMTIQNLKAQIATL SKGKSSDSKAKQIAMLTASLSRLQGAKAKEQKVKNKKKPIALMNGAYESLKEIALKSGEL FDYQKDFLNDASQFRIVLKSRQIGFSYVSSLDALLGAVAGRNQLFLSASEEQARILMNYS QMWAKKLGVSFAKDSEYEKSLDNGATIRVMAHNFRTVQGFTGDIWMDEFAWYPNQKRIWH AFVPSIGAVAGRLTILSTPFEENSFFAELFGDELKFYMFSRHRVDIYRAMAGGLKFDLET MRALFDADTWASAYECQFVDDESALLGIDLIKSCVSDFTPTLPPKNIPVFSGYDVGRTKD RSVHMGVYDAGEGIKRLCLYDVIAKASFEAQENLLTDFLRLNLLAYLKIDKTGIGMPVAE RLKSRFTSRVSGVYFTASVKEALALNLKKHFEDKSISIPNDPLLIADLHAIKRKAGQKSF LYDSDRNEHGHADRFWALALALSYFEKVRERRNKAYII >gi|257441660|gb|ACYG01000027.1| GENE 426 465365 - 466561 803 398 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460902|ref|ZP_05626003.1| ## NR: gi|257460902|ref|ZP_05626003.1| hypothetical protein CAMGR0001_1671 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1671 [Campylobacter gracilis RM3268] # 1 398 1 398 398 679 100.0 0 MFQIFIILLGLFAILLLISIINRKKWSKILGYEPTLDEMSIILELRAAGCSQEKVIEILH AFNSKMLDKKAIDAIIKDKKQRLKFQTKRQELQNRPTEITAYEQESEESADVIDIDPSDE QMIYSTDICANRYADIVYQSLHIAINSKKLDTIESRIGVAEDDFEKIIQYDSYFAKAIEN KYKDLLKRAYTAKYINVAQAYYEKYQTLKSQKAKDKYFDMAKEHLEKGMEDFAADQDTIR GKYRELFDENFKVLPQILEAEVIDSDEYPAGTTNEMIKLFKMGSFDELRMLISQMAYKFA STPQSDAVKKIGMFFVKHDPIYIDILSKVQKIVSKSQGVKQSTIYNDVSPDEVYSVEDIR YVLYYAAEYGDIIRKPFGNSYKLYTKEYPQDNLLISGS >gi|257441660|gb|ACYG01000027.1| GENE 427 466664 - 467098 309 144 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0648 NR:ns ## KEGG: CFF8240_0648 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 4 140 1 137 137 79 39.0 3e-14 MKNLDKALRNFIYRVGAETVNVAKEHTAPIKTGALKRNIKVIRIDARSVTIGNTAGVGYA KFVHEGTGLYGAKKRKITPKKARALKTPYGYRKSIKGQKPNPYLLRAWNEYKLKGLAKAH VALTKDIGQELAAEIKASLQKMTP >gi|257441660|gb|ACYG01000027.1| GENE 428 467095 - 467412 357 105 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460904|ref|ZP_05626005.1| ## NR: gi|257460904|ref|ZP_05626005.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 105 1 105 105 206 100.0 4e-52 MRDFILYIDEPEWGVYQKGYNLWAGEDYDKKLADRYPFATLCVKDGLIMGFFDISVSDKV IKISQNDEMMREVCNFRVLIHNKFKEIFKGSFIDALKYIKEHSAK >gi|257441660|gb|ACYG01000027.1| GENE 429 467409 - 468638 1126 409 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_0671 NR:ns ## KEGG: CFF8240_0671 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 153 404 1 253 260 278 56.0 3e-73 MRNLARSLIRFKILKAKGEVEALLQNYSQTQRQRLEQILDEIVALSTQETDASTLKKLLL DKAASANIEVSPQDLESIYIILAQKVSKKLAVAAAGHIKEAVKFSFDTVDAEAIEAMRKG FYWMGKEYNERLQNRLKDIIERVFKAEIANEEVGSALKEEFGSIINADESYFKGVADHIA LQAQNVAAVTQGSKYGVQFYKVLAILDDRTTKICRSMHGRIIPAEHLSAQADKILNAHSL ADKKAAAAWRDQAFFGKSLPKNFGLPPYHFRCRTEVTPVWVDEEEEDGVMMRNTQPLSND EIIRHIDKIGVERVLDLKAANGEHGLKNRLKRNEKLKSDIIKALNSIIAIAPKKDEENLS NAVSSNGYFMVFDGNRIVTAYKPGKGAQTYFKEKSLALQQEIIKRWWQK >gi|257441660|gb|ACYG01000027.1| GENE 430 468791 - 468976 56 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460906|ref|ZP_05626007.1| ## NR: gi|257460906|ref|ZP_05626007.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 61 1 61 61 109 100.0 5e-23 MFCPKCAHEKTAVLKTIKGLKNIRMRRCEKCGYTWITEEKPLKDKDLAGYVEYIDEIDKK V >gi|257441660|gb|ACYG01000027.1| GENE 431 468976 - 469374 476 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460907|ref|ZP_05626008.1| ## NR: gi|257460907|ref|ZP_05626008.1| hypothetical protein CAMGR0001_1676 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1676 [Campylobacter gracilis RM3268] # 1 132 1 132 132 246 100.0 3e-64 MTKSQEIYRKKLLAMIHLHPFHKHAVQEGAWDVFLQSWGVGSCAELNVKELVNVLAVMDG KAAPRRFEDAATAPQVFAIRNAWQRVAVNVSETALLAFVGRIIKQPCTDVSKLSKKQASW VIAALRKMREAR >gi|257441660|gb|ACYG01000027.1| GENE 432 469467 - 469688 204 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460908|ref|ZP_05626009.1| ## NR: gi|257460908|ref|ZP_05626009.1| hypothetical protein CAMGR0001_1677 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1677 [Campylobacter gracilis RM3268] # 1 73 1 73 73 125 100.0 1e-27 MREVSIAYIDAADRARDMLLCLGVLMQGLGLVCENYESPSGLKEALYLLSRSCDDASDDM ARAKAEGLPPAKA >gi|257441660|gb|ACYG01000027.1| GENE 433 469685 - 470368 732 227 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460909|ref|ZP_05626010.1| ## NR: gi|257460909|ref|ZP_05626010.1| hypothetical protein CAMGR0001_1678 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1678 [Campylobacter gracilis RM3268] # 1 227 1 227 227 423 100.0 1e-117 MNAVVNFNGLDLEVLEFNDTWALSNKQVADGFGVSEEAIRQQKSRGEYRNNVHFYTVTNC NGGAYKTFWTKKGVITLGFKLRETPQTIAFRDWASDFILKSNDIISKSNPYLDKLVDNMG ILNEKIDKLQAKNSALAGELIEASRKYTAALERENALLRRDAEGAGRLLKKSTKLSEAER DEVARLYESGLSQAQICRRLGRSDTAVRNAIRSRSLGSAGGLFEGAL >gi|257441660|gb|ACYG01000027.1| GENE 434 470580 - 470816 316 78 aa, chain - ## HITS:1 COG:no KEGG:Arnit_1914 NR:ns ## KEGG: Arnit_1914 # Name: not_defined # Def: hypothetical protein # Organism: A.nitrofigilis # Pathway: not_defined # 7 78 185 256 257 70 52.0 2e-11 MAEASDNLIKRTCKQLGLTYKQLGELIGYSESALNNAARQDKISEPLTFAINLYLENLKL KEELKDFRTLKDILSKTL >gi|257441660|gb|ACYG01000027.1| GENE 435 471003 - 471398 546 131 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0257 NR:ns ## KEGG: CHAB381_0257 # Name: not_defined # Def: putative host-nuclease inhibitor protein Gam # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 120 1 121 162 134 64.0 9e-31 MEIKNFADVDNALKRVCELEVALADINGEITLKCNEIKDAQKAKVEKLDSEKKYIEAQIT AFCESNKAEFAEKRSKDFTFGKIGYKLSKSVSLPRIKEKVEKLIKALKSYKLDDCISYEE TIKQRSDLRAR >gi|257441660|gb|ACYG01000027.1| GENE 436 471632 - 471982 267 116 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0256 NR:ns ## KEGG: CHAB381_0256 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 6 116 2 111 111 162 71.0 6e-39 MDKRTARLCFVSSPYASIKCKHDRDRDYYARKLAEQACAIVRANGYEPISPVLAWLGVYS ELERDRIMKNCEELLSVCSYYYFFPCEYSENSKGMAYERELARQLGVNELKFSLFD >gi|257441660|gb|ACYG01000027.1| GENE 437 472047 - 472817 980 256 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460913|ref|ZP_05626014.1| ## NR: gi|257460913|ref|ZP_05626014.1| hypothetical protein CAMGR0001_1682 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1682 [Campylobacter gracilis RM3268] # 1 256 1 256 256 461 100.0 1e-128 MQEKESKYVVPSVVLDEDKRAILRHQDYGISEVLLKEPLRNKYTVDALDVDSFVDLVNEY KEPSSKLFFDDKSIKCIVDFNSKDKAEFCEKRINLGLGYTPFYETFAASVGKNLGQRDFV FLLKSLFMFISDIDGKANDDMDVIELAESLQAVKKFDSVQKNTSSKISLDVEIKSGAKET ISIPKTITFTLPVYEADTEIRGKFECELFVSIDEERFGLKLVCYTAEVSRREVLSKIVSK ISERCEGVKAYKASIN >gi|257441660|gb|ACYG01000027.1| GENE 438 472837 - 473145 401 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460914|ref|ZP_05626015.1| ## NR: gi|257460914|ref|ZP_05626015.1| hypothetical protein CAMGR0001_1683 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1683 [Campylobacter gracilis RM3268] # 1 102 1 102 102 154 100.0 2e-36 MTIVNSDIDVLVDALRSLGAGALLGAAAENLKEAIRAVQITGKTAGVTIKISVKSDPNSE GEVLVFGTTSASLPKEPVKARFYVSNELLPVRNAPNQLVMKM >gi|257441660|gb|ACYG01000027.1| GENE 439 473285 - 473506 87 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460915|ref|ZP_05626016.1| ## NR: gi|257460915|ref|ZP_05626016.1| hypothetical protein CAMGR0001_1684 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1684 [Campylobacter gracilis RM3268] # 1 73 30 102 102 155 100.0 1e-36 MPSMVSVGLRSVRRDEIRGGLLVKGWAFYVSFWCKSKKECAEIACFGRLHICADETMAAD PYIEKILRHLKEP >gi|257441660|gb|ACYG01000027.1| GENE 440 473590 - 473865 397 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460916|ref|ZP_05626017.1| ## NR: gi|257460916|ref|ZP_05626017.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 91 1 91 91 161 100.0 1e-38 MQRIQGYRTDKVCAERVRMLKGDADVAYHELAAMLGISVERVAMIERTALAKLRHPKNRK KWMEIFETIAELERCEAQRLGSGWSLKGTKS >gi|257441660|gb|ACYG01000027.1| GENE 441 473902 - 474063 151 53 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0426 NR:ns ## KEGG: CHAB381_0426 # Name: not_defined # Def: anaerobic ribonucleoside triphosphate reductase # Organism: C.hominis_BAA-381 # Pathway: Purine metabolism [PATH:cha00230]; Pyrimidine metabolism [PATH:cha00240]; Metabolic pathways [PATH:cha01100] # 6 47 852 893 893 68 66.0 7e-11 MKFPKELEAKRTKCIVYTRVMGYLRPVESFNIGKIGEHKQRVLFEEKKRCRPH >gi|257441660|gb|ACYG01000027.1| GENE 442 474128 - 474310 193 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460918|ref|ZP_05626019.1| ## NR: gi|257460918|ref|ZP_05626019.1| hypothetical protein CAMGR0001_1687 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1687 [Campylobacter gracilis RM3268] # 1 60 1 60 60 110 100.0 4e-23 MKISKDMKMSDLKACRDEIIIAHSFILFHTPRGWIAKMRKRESIVVPMPRFRRGLGTIWS >gi|257441660|gb|ACYG01000027.1| GENE 443 474321 - 475214 1021 297 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460919|ref|ZP_05626020.1| ## NR: gi|257460919|ref|ZP_05626020.1| hypothetical protein CAMGR0001_1688 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1688 [Campylobacter gracilis RM3268] # 1 297 13 309 309 537 100.0 1e-151 MSLKEKFEVCKAYGITLGKIADAIGKREGTVSGVLNGKYDSSKSELYAAAIEAFLDKVIA ANTPKKEARNGGEWLSLAQQKIKERIYKMEQTKLSFFELILGESGMGKTYLLQKLTGDLG GIYVKARKSLSASAFMSLLLRAVGEKPKGNTDDKFEQFCEAISNLKTRLIVIDEADLFVR DNDLTFERKFELLREIYEFSKRENLGIAVIAVGIGVLKKRIDRLGGYLQSRLTYSPEMTL SRDELIKIGKLAGIDTEVAEFLAEGQNARLYEKTALNLALGYEQKVAANLVYHVRKR >gi|257441660|gb|ACYG01000027.1| GENE 444 475292 - 476620 1071 442 aa, chain - ## HITS:1 COG:no KEGG:Spico_0833 NR:ns ## KEGG: Spico_0833 # Name: not_defined # Def: hypothetical protein # Organism: S.coccoides # Pathway: not_defined # 18 394 174 586 700 89 24.0 4e-16 MSALEWAVGFMLHNPLASKSFTYEQLQSYAKDNALKIGSYQSFARLTAAPEIKAMLLRAS CGDRGVRNEWAMHIIRDLNCYESMEMICGDQIVFDFDAVGPAGEVVNPNAYVWIDMGSGA IIGIDIVLGKYNRLSVGNSLKMALRFGIPDAIYTDNGKPELSEYIAGVRSQLGGIKFRDF DDLAPNLLHKKAKVRNSRAKPIENIFNHVQRRMGEMVIAERGGAGYHKDGDRQSEIVAKY MKQNPLNFTDFISYFERAVRWWNEHYNASRKIHPLKSFLDKLEAKPRAVFDETTLEYIFS ERRSIRVRNSCIALSVMGQRRTYSHPALCKLVGQNVEVRINRGEVESVFVVDMKNNRPIC EAHLIDRIDPRDHAALSAQLAKNEAVVSAVRQAFGYYANLYKRPNTISSYASTAFEVEAQ RQNSRRLHSKIAMSNEELLAAM >gi|257441660|gb|ACYG01000027.1| GENE 445 476621 - 477226 682 201 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0251 NR:ns ## KEGG: CHAB381_0251 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 62 1 62 215 73 62.0 6e-12 MWVNSKCAAEILGVSDRALQKSTKLASQKGKKICSVKHNILCFTYTDGIGRGGKTLQIWI DDNLINGENGEISQQSAPAAIKNSAESEDKYQEPALSAEQNERSDAGRGGVSCERSEAEQ NAPSLKIKDIEKMNKLKAVNELKSCPAGMSKTLWGKGVAAKYEVSLKTLYSWAKLFKQSE VEVKNDELSIDFKAKFKSSSF >gi|257441660|gb|ACYG01000027.1| GENE 446 477524 - 477724 244 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460924|ref|ZP_05626025.1| ## NR: gi|257460924|ref|ZP_05626025.1| hypothetical protein CAMGR0001_1693 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1693 [Campylobacter gracilis RM3268] # 1 66 1 66 66 116 100.0 6e-25 MESLSQVAKERLALSILEKLGCFDEAKRIASKAHLEPHGLPEDSVEYITNRYIAALEMID EVCKSH >gi|257441660|gb|ACYG01000027.1| GENE 447 477737 - 477877 105 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460925|ref|ZP_05626026.1| ## NR: gi|257460925|ref|ZP_05626026.1| hypothetical protein CAMGR0001_1694 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1694 [Campylobacter gracilis RM3268] # 1 46 1 46 46 68 100.0 1e-10 MSKIDELHKEYLRQRDELIAKMFMEEDAKAALSREKRGLQGMILPP >gi|257441660|gb|ACYG01000027.1| GENE 448 478014 - 478715 754 233 aa, chain + ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 229 3 220 231 62 26.0 9e-10 MNLGLRIKNLREERGLTQLELANLSGISRASIQLYEADKVEIPVKKLSDISKVLDVDIDF FTKDKSSLVLRKSFVSNKNSVVSPANLKKSQKEQIAEDQIFIRKLSSAVGAGESVDIEGV EVYDTDVLVPFSRMLFNLPVNEHNIRCLKVVGYSMIPMLYPDSWVIARMGPSFDGDGLYI IDFGGNFMVKLLQKHPNGTLFVNSVNQEYRSYEIGPNDEVRVQIVGKVLRCVI >gi|257441660|gb|ACYG01000027.1| GENE 449 478848 - 479756 642 302 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460927|ref|ZP_05626028.1| ## NR: gi|257460927|ref|ZP_05626028.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 302 1 302 302 617 100.0 1e-175 MDQNRLEELRKLLQKRHQEPRQGLEQNSNGDNFKASNSETKNSEVSNSETKNSDPDTLNL KAELEAEADHNSACENSAEPQNFISDDGGSLQQNSKTRDYDKNPLIIKDHTYYDYMKYSI IPTMVGLLVALAFATIVNPINIEMFRLVPLVLVIFVTNFMNRDGAYFVFYNDKILYYNKN KIRKTFELNKIGAMVLSFDWRWSWKQKIPIFIKIFLVIWFLLGWLATGEPINGVAIIFTF CFSILTTKAYMHLLNGSLGFFGLHDQLVLYDKSHIKGKKSEIDKKCGANSDLGDICKHIG VR >gi|257441660|gb|ACYG01000027.1| GENE 450 479778 - 482234 3193 818 aa, chain - ## HITS:1 COG:Cj0342c KEGG:ns NR:ns ## COG: Cj0342c COG0178 # Protein_GI_number: 15791710 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Campylobacter jejuni # 1 806 131 935 941 1164 70.0 0 MSSSDIIAEIMKLPRGAKVILGAPLVREKKGSFADMLQSLREQGYVRAQIDGVLVRLDEE IELSKTKKHSIKVIIDRTIIDEENSIRIASDVEKALKLSFGELEVEIANAAELGLAQSLI HYSEHMACFDCKISFKPLEPLAFSFNSPKGACESCDGLGIKFSLDLGKIINENASIEGGA IKVMSGFNKSYYYKFLLGFCEANGINVKIPYANLSEEQKKLILYGSVKEIDFYWKKHKLV RKFEGAIKYAYDLLKNESDLDDYMSEKICPDCGGLRLRPESLAVKVAGKGIGDVINMSIA DCVEFFSDEKRFSNLSEKDAQIAAPILKEINERLFFLKDVGLGYLTLGRDARTISGGEAQ RIRIASQIGSGLSGVMYVLDEPSIGLHERDTQKLIKTLRNLQEKGNSVIVVEHDKKTIEA ADFVVDIGPGAGNLGGEVVFAGDVAHLLKSNTQTALYLNNQKEINYQKHRKQELWLSIKN VNINNIHGLCAKFPLRNLVGITGVSGSGKSSLVLQTILPTALEELNRARKVHAVKDAKIS GLDSLDKVIYLDQTPIGRTPRSNPATYTGVMDEIRALFAATKEAQLRGYKIGRFSFNVKG GRCEKCAGEGEITIEMHFLPDISVVCDVCHGTRYNAQTLEILYKNKSIADVLAMSIDEAL EFFKAVPKIYQKLKTLADVGLGYVSLGQPATTLSGGEAQRVKLAKELSRTDTGNTLYILD EPTTGLHFADVDRLVAVLHHLVDLGNSVFVIEHNLDVIKNCDYIIDMGPEGGEGGGQIVA CGTPEKLAKDFKKTGSYTGEFLAQELAAMKSASKNKRG >gi|257441660|gb|ACYG01000027.1| GENE 451 482417 - 482623 390 68 aa, chain - ## HITS:1 COG:Cj0342c KEGG:ns NR:ns ## COG: Cj0342c COG0178 # Protein_GI_number: 15791710 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Campylobacter jejuni # 1 68 1 68 941 117 82.0 6e-27 MNDLITITGAREHNLKNINLQIPKDKLVVFTGLSGSGKSTLAFDTLYAEGQRRYVESLSS YARQFLDR >gi|257441660|gb|ACYG01000027.1| GENE 452 482699 - 483859 859 386 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460930|ref|ZP_05626031.1| ## NR: gi|257460930|ref|ZP_05626031.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 386 8 393 393 720 100.0 0 MILICTALRCEAQAIIESFKLTRSGDLFAGEQMLLYICGVRFGAKFEADAAGDIEIEFKS EPGAKFVRRADTDAEFGRELRRDRLGADVKFEHRSDADALCGGDAETGSAQNAIKNFKIL DLGSAQNSERFGEILLSRRVDFALNIGVCGCADKGVQIGEAFYFDGTAAQEFCGEDGSKF YSSQVREHSARALKFQNVCEREFCGASLGDKLRANLICVSEPKILNAAEQTDEANIAAIE ACGEINAQTPTQGANGAANTKNFTREATRATIQGVTQVETQNLASVKPSQIAVGRHSIAT NTAARATQNTLCTAKGATCERANRGVTLYDMESALFVGACERAGVPWAMMKIVSDHLRGE RLSKSFVYELVKARLPQIRAAIKGEI >gi|257441660|gb|ACYG01000027.1| GENE 453 483964 - 484443 429 159 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460931|ref|ZP_05626032.1| ## NR: gi|257460931|ref|ZP_05626032.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 159 1 159 159 213 100.0 3e-54 MKIKGSYLYFALLACACVAACAYAVADLFADPPSLVFLALLLAFACIGLWLKDTLIGARY LFYCVCVQLLFVAVIFAVHKFPAMAQFVRSAEIGVGGAGIPLGIALLVLPAFFCALPYYY RTGVKKIPQKLILGGILILNVAITLAYAFYFERLFYDAI >gi|257441660|gb|ACYG01000027.1| GENE 454 484517 - 485791 1276 424 aa, chain + ## HITS:1 COG:FN0898_2 KEGG:ns NR:ns ## COG: FN0898_2 COG1533 # Protein_GI_number: 19704233 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Fusobacterium nucleatum # 142 371 83 314 330 81 23.0 2e-15 MTEAKKEPGAQFGVNLDERSSAFLGALFDKFHFSFQQRKQLAEFASDFEAWDETPVYELL ADERCGLNFNKAKFNNAGKNPSGEQIFNFVREVWLDLKSRPHSYASFKSDYAPRKFEISS FRADRIALGRCPVASENTRCCNLLTLDAVNSCGFDCSYCAIGSFYKQGKIGFDENFAANL ARLRLDPARSYHIGTGQSSDSLMWGDRFGILSALCDFAARHENVILELKSKSNNIRFFLQ REIPRNLIVTFSLNTPAIIANEEHLSASLDARLAAAEALAERGILVGFHLHPMVWYEGWQ SDYGALFERLLRSFDPSGVAMVSLGTLTFIKPVVKKLRSRGLRSKILQMPLADANGKLSY PLQIKRELFKFAADALSSWRERVFFYLCMEDASLWREVLGHEYESNDAFEEAMKAAYFAK IRQC >gi|257441660|gb|ACYG01000027.1| GENE 455 486177 - 486845 772 222 aa, chain + ## HITS:1 COG:YPO1993 KEGG:ns NR:ns ## COG: YPO1993 COG1028 # Protein_GI_number: 16122235 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Yersinia pestis # 2 157 6 187 226 78 35.0 8e-15 MKALITGASGGIGSAVAELLRQNGYEILTLASRFEDTDALAKECRALAAACEVDALILCA GTAKFAPLEAMSESEISKILNVNLAANIIITRTLLPNLKRNRAHIIGISSIEALRSSRFS AVYSASKAGLRAFLLCLFEEARKQIRVSCINPDVTKTPFYEDLSFEPAYDEASFVDTGEI ANFTLQILRTKSNVSEFTIRPQIVNLRKKSKFNREGGELENR >gi|257441660|gb|ACYG01000027.1| GENE 456 486832 - 487332 287 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460936|ref|ZP_05626037.1| ## NR: gi|257460936|ref|ZP_05626037.1| hypothetical protein CAMGR0001_1705 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1705 [Campylobacter gracilis RM3268] # 1 166 1 166 166 303 100.0 4e-81 MKIGKSHVFVLILALIIIYAAFISGSGGYCSAREFFSGRHDEEDDACIAKLVKRADDGNS FAESRLRYPTMEYIKRVCEKGVENLSERERYYFQGFGGDRCEIWGFKTPKSKGGEANTTS DDTNVTSGERNLTRAEANNGEARTTGSKADKTKREGNSTEEQNTGR >gi|257441660|gb|ACYG01000027.1| GENE 457 487421 - 487936 457 171 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460937|ref|ZP_05626038.1| ## NR: gi|257460937|ref|ZP_05626038.1| dihydropteroate synthetase [Campylobacter gracilis RM3268] dihydropteroate synthetase [Campylobacter gracilis RM3268] # 1 171 1 171 171 310 100.0 2e-83 MVKKRSLKIKGSISIAIILLWVYFLITTLGGDRYCGIWDYIANSEEDDACIAKLIKRADA GSELALNRLRYPSKAYIKRVCERGVENLGERERYYFERLGVDRCEAPNFRDNEANTTSGG GNLARGDTNATDGERNLTRAEANNGEADTTGSKVDKTKRKGNSTEEQNAGR >gi|257441660|gb|ACYG01000027.1| GENE 458 487923 - 488972 917 349 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1357 NR:ns ## KEGG: CCV52592_1357 # Name: not_defined # Def: sulfate/thiosulfate import ATP-binding protein CysA (EC:3.6.3.25) # Organism: C.curvus # Pathway: not_defined # 126 347 20 184 186 169 45.0 2e-40 MLGDENLEKFFSKIDAAEFGISAGSKLASKNPKLAGSTRDGSGDKPLKSQGGAEFRGEQP YFSGAQQDEILKFNAKPPFDAEQARLDTEQAHLKFNVRPSQLEPGVRQALAFDAELPQAP FDAERAQTKIQNFMRDLLQNYVLCVSGAEFAFAEIEAYFTCADRNTYKRTSRAGEIFFHN FGFDISFRSVPQSGGGILVRSLRVLSGAEFLAGSLPDSTGCLPGLAGDLHGLTESDSLGS AAPLIQNGDFIAGPRKCMGKILNLQTQNLSFSLKYAPKTARAAGFSNRIRRSEIVNEANL DANTPNGAAGAAKLANEPRRLTSKEFEAYLSAGCAAAKTYKKSLQRYEG >gi|257441660|gb|ACYG01000027.1| GENE 459 489073 - 490089 501 338 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1200 NR:ns ## KEGG: CHAB381_1200 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 98 336 2 242 242 77 30.0 8e-13 MDKSRLEELKRLLQKRHQEPKRGLEQNFNGENFKAPNSEIQNSEASNFESLNSRAPNFEA SNSETLNSDSDALNLETEADQNSACENNAEQQNFISDDSDALPQNSKARDYDKDPIVIKN YEKFFVYSFLVLLLPISTLHAFLIINFINHEDIDIVQYFAILFIILLSTVIISIFTIIRP RQEIKFTNKYIEFINDGLVEKRCEIDENALSLNFSIGILASSYEIGKSEKIFLYFIAIFI CVTWWDIFFIAVFFTYLFGFLLNFILYLFINRNLKGFRALPFIRIACPSYGRWFRNKPVY PRYYLVYLYNQKIYDEIKEYFLLKNVNINNVKKDYLFI Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:50:00 2011 Seq name: gi|257441603|gb|ACYG01000028.1| Campylobacter gracilis RM3268 contig00014, whole genome shotgun sequence Length of sequence - 40533 bp Number of predicted genes - 42, with homology - 41 Number of transcription units - 17, operones - 6 average op.length - 5.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 75 - 134 5.7 1 1 Tu 1 . + CDS 311 - 1030 820 ## COG0598 Mg2+ and Co2+ transporters + Term 1135 - 1171 1.1 + Prom 1396 - 1455 1.9 2 2 Op 1 . + CDS 1508 - 2044 373 ## gi|257460945|ref|ZP_05626045.1| methylated-DNA--protein-cysteine methyltransferase 1 3 2 Op 2 . + CDS 1938 - 2450 295 ## COG0350 Methylated DNA-protein cysteine methyltransferase 4 3 Tu 1 . - CDS 3145 - 3444 318 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase - Prom 3587 - 3646 4.9 + Prom 3406 - 3465 5.8 5 4 Tu 1 . + CDS 3712 - 4440 880 ## COG3340 Peptidase E + Term 4513 - 4550 -0.7 + Prom 4655 - 4714 2.9 6 5 Tu 1 . + CDS 4775 - 4948 83 ## gi|257460953|ref|ZP_05626053.1| hypothetical protein CAMGR0001_1770 + Term 5167 - 5199 0.1 + Prom 5714 - 5773 5.3 7 6 Tu 1 . + CDS 5793 - 6536 888 ## CCC13826_0433 hypothetical protein + Prom 6826 - 6885 5.1 8 7 Op 1 . + CDS 6912 - 8315 993 ## MAE_17480 hypothetical protein 9 7 Op 2 . + CDS 8312 - 8881 273 ## gi|257460959|ref|ZP_05626059.1| hypothetical protein CAMGR0001_1776 - Term 9015 - 9073 1.2 10 8 Tu 1 . - CDS 9090 - 9485 619 ## COG2077 Peroxiredoxin - Prom 9515 - 9574 2.5 11 9 Op 1 51/0.000 - CDS 10103 - 12178 2722 ## COG0480 Translation elongation factors (GTPases) 12 9 Op 2 56/0.000 - CDS 12188 - 12658 732 ## PROTEIN SUPPORTED gi|154148658|ref|YP_001407178.1| 30S ribosomal protein S7 13 9 Op 3 . - CDS 12728 - 13102 619 ## PROTEIN SUPPORTED gi|154148589|ref|YP_001407179.1| 30S ribosomal protein S12 14 9 Op 4 . - CDS 13186 - 13575 499 ## CCV52592_0183 DoxX family protein 15 9 Op 5 58/0.000 - CDS 13612 - 18126 5351 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 16 9 Op 6 28/0.000 - CDS 18123 - 22259 3164 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Term 22282 - 22316 5.1 17 9 Op 7 47/0.000 - CDS 22350 - 22730 526 ## PROTEIN SUPPORTED gi|157165629|ref|YP_001466544.1| 50S ribosomal protein L7/L12 18 9 Op 8 43/0.000 - CDS 22751 - 23230 620 ## PROTEIN SUPPORTED gi|154148718|ref|YP_001407182.1| 50S ribosomal protein L10 - Prom 23267 - 23326 4.5 19 9 Op 9 55/0.000 - CDS 23344 - 24045 987 ## PROTEIN SUPPORTED gi|222823476|ref|YP_002575050.1| 50S ribosomal protein L1 20 9 Op 10 45/0.000 - CDS 24102 - 24527 635 ## PROTEIN SUPPORTED gi|223038861|ref|ZP_03609153.1| ribosomal protein L11 21 9 Op 11 . - CDS 24548 - 25078 561 ## COG0250 Transcription antiterminator 22 9 Op 12 . - CDS 25093 - 25266 146 ## gi|257460974|ref|ZP_05626074.1| preprotein translocase, SecE subunit - TRNA 25279 - 25354 74.3 # Trp CCA 0 0 - Term 25280 - 25326 -1.0 23 9 Op 13 4/0.000 - CDS 25362 - 25535 256 ## PROTEIN SUPPORTED gi|154149108|ref|YP_001407187.1| 50S ribosomal protein L33 - Term 25546 - 25585 8.6 24 9 Op 14 . - CDS 25592 - 26791 1450 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 26973 - 27032 4.0 + Prom 26597 - 26656 1.8 25 10 Tu 1 . + CDS 26748 - 26996 59 ## - TRNA 26848 - 26922 88.3 # Thr GGT 0 0 - TRNA 27036 - 27112 91.4 # Gly TCC 0 0 - TRNA 27125 - 27209 62.7 # Tyr GTA 0 0 - TRNA 27246 - 27321 91.2 # Thr TGT 0 0 + Prom 27364 - 27423 8.7 26 11 Tu 1 . + CDS 27448 - 27660 443 ## gi|257460977|ref|ZP_05626077.1| conserved hypothetical protein + Prom 27790 - 27849 4.7 27 12 Tu 1 . + CDS 27936 - 28145 158 ## gi|257460979|ref|ZP_05626079.1| hypothetical protein CAMGR0001_1801 - Term 28045 - 28083 0.1 28 13 Op 1 3/0.000 - CDS 28277 - 29581 1034 ## COG0247 Fe-S oxidoreductase 29 13 Op 2 . - CDS 29593 - 30957 1344 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 30 13 Op 3 . - CDS 30950 - 31432 561 ## CHAB381_1696 hypothetical protein 31 13 Op 4 . - CDS 31447 - 32370 875 ## COG0078 Ornithine carbamoyltransferase 32 13 Op 5 . - CDS 32367 - 32759 286 ## COG3654 Prophage maintenance system killer protein 33 13 Op 6 . - CDS 32770 - 32985 265 ## gi|257460985|ref|ZP_05626085.1| hypothetical protein CAMGR0001_1807 34 13 Op 7 . - CDS 32988 - 33962 1221 ## COG0113 Delta-aminolevulinic acid dehydratase - Prom 33990 - 34049 5.8 + Prom 33934 - 33993 5.8 35 14 Op 1 1/0.333 + CDS 34026 - 34586 668 ## COG0807 GTP cyclohydrolase II 36 14 Op 2 . + CDS 34583 - 35161 420 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 37 14 Op 3 . + CDS 35161 - 35367 293 ## gi|257460989|ref|ZP_05626089.1| conserved hypothetical protein 38 14 Op 4 . + CDS 35364 - 35906 795 ## CHAB381_1702 hypothetical protein + Term 36035 - 36070 0.3 + Prom 36290 - 36349 6.6 39 15 Op 1 . + CDS 36521 - 37678 968 ## COG0038 Chloride channel protein EriC + Prom 37797 - 37856 3.6 40 15 Op 2 . + CDS 37877 - 38299 781 ## COG1652 Uncharacterized protein containing LysM domain + Term 38319 - 38356 6.1 + Prom 38435 - 38494 4.5 41 16 Tu 1 . + CDS 38526 - 39152 393 ## gi|257460995|ref|ZP_05626095.1| conserved hypothetical protein - Term 39136 - 39184 1.2 42 17 Tu 1 . - CDS 39362 - 40420 1166 ## CHAB381_1735 hypothetical protein - Prom 40443 - 40502 5.8 Predicted protein(s) >gi|257441603|gb|ACYG01000028.1| GENE 1 311 - 1030 820 239 aa, chain + ## HITS:1 COG:Cj1011 KEGG:ns NR:ns ## COG: Cj1011 COG0598 # Protein_GI_number: 15792338 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Campylobacter jejuni # 36 237 40 238 255 105 35.0 8e-23 MNPITEKRSVSGYYYAEDREYVYFVTDAPREQNYRFIFDAGAIYLQEGAAEPRLSSEAEF FAVVKKILAQYRDKILEHSAELENYEKIYTRHGDFSKFMKRHSILKYEIRKFQNKISHFY EALLICGNEQPALKKRLKNYAYEAGVFKGVMSEYAVRIEDIYQFIQGLKNDKISRNIYIL TIISSLLLPLNFITSFFGMNTTGLFLSDSQHGTLIVTLAMCVIFVVMVSFFMLYVKKRN >gi|257441603|gb|ACYG01000028.1| GENE 2 1508 - 2044 373 178 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460945|ref|ZP_05626045.1| ## NR: gi|257460945|ref|ZP_05626045.1| methylated-DNA--protein-cysteine methyltransferase 1 [Campylobacter gracilis RM3268] methylated-DNA--protein-cysteine methyltransferase 1 [Campylobacter gracilis RM3268] # 1 178 1 178 178 251 100.0 2e-65 MKFIAYYDSPLGKITLAGDEAGLCGLWFEGEKYYAHALVTSSANGKFCARDIAAKTDAAA RKGCYEKGRALETKSSADKKRGDDDLLAKEQHATSKTQRDFAALKKSEKSDIAAKAESST DVKFYARTLIESEKFFTRDFAAYDASKKPRATNLSAQSASEKFCAKRAKRAKRAKRVL >gi|257441603|gb|ACYG01000028.1| GENE 3 1938 - 2450 295 170 aa, chain + ## HITS:1 COG:SA2335 KEGG:ns NR:ns ## COG: SA2335 COG0350 # Protein_GI_number: 15928126 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Staphylococcus aureus N315 # 28 170 29 173 173 147 49.0 9e-36 MRVKNLARPIFRRKARAKNSAQNEQNEQNEQSGYFEEKNLAVFDQTRRWLDLYFSGREPG FTPALNPSGSAFRRTVWEILLKIPYGKTTTYGQIAREIDAARGLAKMSAQAVGGAVGHNE ISIIIPCHRVIGAHGNLTGYAGGIDRKIKLLQPGGVDMRGLFTPPNSTAP >gi|257441603|gb|ACYG01000028.1| GENE 4 3145 - 3444 318 99 aa, chain - ## HITS:1 COG:lin0580 KEGG:ns NR:ns ## COG: lin0580 COG3695 # Protein_GI_number: 16799655 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Listeria innocua # 11 98 10 98 98 79 44.0 1e-15 MVLTQNLIYEILSVVEEIPAGRVASYGQIARLIGLPACSRLVGRVLSQAELYGDYPCHRA LYHAGALAASFAAQRELLEAEGVEFRGRRVRMKKHRWEC >gi|257441603|gb|ACYG01000028.1| GENE 5 3712 - 4440 880 242 aa, chain + ## HITS:1 COG:PM0454 KEGG:ns NR:ns ## COG: PM0454 COG3340 # Protein_GI_number: 15602319 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Pasteurella multocida # 35 242 3 208 243 243 55.0 3e-64 MQNQRRNLLKVAALAAGAAMLSTSELAASEKAFKLSKRDHSKQRALLLSSSGYKDTKYLS HAVSWIGKFAKENNLAGKKIVFIPYASLRRSYDEYEKRVKEALASLNLNIVGVHHAKNAA KEVASADCIFVGGGNTFKLVHDMYENELIALISKMVEDGTPYIGWSAGSNVAGATMMTTN DMPIIEPESFNTFNISPHQINPHFISGKPAGHNGESREERLEEFLIANQKSTVYAMPEGT AF >gi|257441603|gb|ACYG01000028.1| GENE 6 4775 - 4948 83 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460953|ref|ZP_05626053.1| ## NR: gi|257460953|ref|ZP_05626053.1| hypothetical protein CAMGR0001_1770 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1770 [Campylobacter gracilis RM3268] # 8 57 1 50 50 96 100.0 5e-19 MPHVHLLMPLGDFIPYIADILAGCGGTVYLQKRSGSAYGAAKIYSSNRRNLTNQGKA >gi|257441603|gb|ACYG01000028.1| GENE 7 5793 - 6536 888 247 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0433 NR:ns ## KEGG: CCC13826_0433 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 22 247 3 225 225 282 60.0 7e-75 MTFSDFFKKGGKNSANAAKIGKTAQERKDISIEILKSQGVPYTLHLPLRYETDEVTPREK DEVIARAICSYAAIMCACSIRDEGKLADEDRQGVQGFLTNRYGCIDKLTRIERRVTQGEA SRDEAGNMGWKYESLWALMWAMGLVEKLRFPSEICDCAFVMDTFSGGDFSARVKLRGTDE ILQALDLIYRYHWACVNARVHGSDSAGLDEEVVMERRGGLEWLCCKGAENDNLTDEYNAW DYPDLNT >gi|257441603|gb|ACYG01000028.1| GENE 8 6912 - 8315 993 467 aa, chain + ## HITS:1 COG:no KEGG:MAE_17480 NR:ns ## KEGG: MAE_17480 # Name: not_defined # Def: hypothetical protein # Organism: M.aeruginosa # Pathway: not_defined # 1 457 1 457 462 226 37.0 1e-57 MKISLKNVGMLDEANFEVGGLTIICGENNTGKTYATYSLYGYLDFIRNNRYFWNFYRNLA EKYVNDIEVDGLDIKIFTDKFIEILTDFSNFIFKLYRDALVEILAGKDGDFDKVIFEDDI IRNLINFLKSENFEYIKEYFSLSNIFSLSQIDDDILLFTLKRDIGHDIEMGIISAIFNYI CILSYPNSFIISAERTGASMFQKELDVNKNEIVEQISMADTKDMTHAVIELLQKRYSRYP KPVKDNIYFIRDLGEVAKKKSFIVEDKNELNAEILGLLFKIVGGKYIVSDEGIEFAPGAK QRITKGKFAIQRASSSVRSLLMLNYYILHRVSKNDILMIDEPELNLHPNNQILIGRLIAL LVNAGIKVFITTHSDYIVREISNCIILNNLENEKIIKFKKNGYSKEYKLDSKKVRAYLAK NTKGKNTLNPVKINERGIFMETFDDPIDIQNENQELIFTEFLNSSKK >gi|257441603|gb|ACYG01000028.1| GENE 9 8312 - 8881 273 189 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460959|ref|ZP_05626059.1| ## NR: gi|257460959|ref|ZP_05626059.1| hypothetical protein CAMGR0001_1776 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1776 [Campylobacter gracilis RM3268] # 1 189 1 189 189 318 100.0 1e-85 MTNKILKNLRNSIDSDLRILPSRTLFSIIEDRRESLIKRINFKFTNQDDILIIRQKENIH TIKFFEDKNFATNKHCDFIVLIVVSNELKIYFCEIKSSDKKIDEANMQIKSSKLFLKYLF SCYGEYFNNEYFVTINIDNISKKYYIYPKINISSKKRVCADFLDMLPKQIKIDSNGTTDT IDGYQFFED >gi|257441603|gb|ACYG01000028.1| GENE 10 9090 - 9485 619 131 aa, chain - ## HITS:1 COG:Cj0779 KEGG:ns NR:ns ## COG: Cj0779 COG2077 # Protein_GI_number: 15792117 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Campylobacter jejuni # 1 126 1 125 175 128 53.0 3e-30 MQQTKLQGVSVGLSGGELKLGNKAPEVSLVAADLSEVKVSGGTGKARVIIAVPSLDTDVC ATETHKFNERAASIKNTEVFVVSMDLPFAAGRFCSTEGIKNLRALSDFRDKEFARAYGVL IADGRLARPQL >gi|257441603|gb|ACYG01000028.1| GENE 11 10103 - 12178 2722 691 aa, chain - ## HITS:1 COG:Cj0493 KEGG:ns NR:ns ## COG: Cj0493 COG0480 # Protein_GI_number: 15791857 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Campylobacter jejuni # 1 691 1 691 691 1227 89.0 0 MARKTPLHMVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHEGAATMDWMEQERERG ITITSAATTCFWNNHQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVW RQANKYHVPRIIFVNKMDRVGANFYNVEQQVKDRLKAHPVPIQIPIGAEDDFKGVIDLVT MKALVWDDSKGPSAPEIVEIPAELREKAQEYRDKMIEAVAETDEALMEKYFNGEELSVEE IKKGIKKGCLSLSFFPMLCGTAFKNKGVQPLLDAVVDYLPAPDEVPAIKGQYEDGSEVHV SSTDEGEFAGLGFKIMTDPFVGQLTFVRVYRGVLESGSYVVNTGKGKKERIGRLLRMHSN KREEIKELYAGEIGAVVGLKDTLTGDTLASEKDKVILERMEFPDPVISVAVEPKTKADQE KMGIALQKLAQEDPSFRVATDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVA YRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGTGYEFVNDIKGGAIPKEYIPAV DKGCQEAMQNGVLAGYPVEDVRVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVIL EPMMKVEVETPEEYMGDVIGDLNKRRGQVNNMSERGGNKIIDAFCPLSEMFGYSTDLRSQ TQGRATYSMEFDHYDEVPKNVGEEIIKKRNG >gi|257441603|gb|ACYG01000028.1| GENE 12 12188 - 12658 732 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148658|ref|YP_001407178.1| 30S ribosomal protein S7 [Campylobacter hominis ATCC BAA-381] # 1 156 1 156 156 286 89 1e-76 MRRRKAPVREVMPDPIYDSKVITKFINSLMFDGKKSVATEIMYGALNFIDNKGGEKKGIE VFNDAIDNVKPLMEVKSRRVGGATYQVPIEVRPARQQALAIRWIISFARKRSERTMIERL AYELMDAANSKGSSFKKKEDTYKMAEANKAFAHYRW >gi|257441603|gb|ACYG01000028.1| GENE 13 12728 - 13102 619 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148589|ref|YP_001407179.1| 30S ribosomal protein S12 [Campylobacter hominis ATCC BAA-381] # 1 124 1 124 124 243 96 2e-63 MPTINQLVRKERKKITEKSKSPALKNCPQRRGVCTKVYTTTPKKPNSALRKVAKVRLTSG FEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVAKRTVARSKYGAK RPKK >gi|257441603|gb|ACYG01000028.1| GENE 14 13186 - 13575 499 129 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0183 NR:ns ## KEGG: CCV52592_0183 # Name: not_defined # Def: DoxX family protein # Organism: C.curvus # Pathway: not_defined # 3 129 1 127 127 120 51.0 2e-26 MNMININFGLLFIRLGLGVCLLMHGIFKLTHGIDGVKSMLVARGIPDLVAYGAYVGEVLA PAMIIIGVFCRIGALLVIANVLMIIYVLHTPLSALTGVGGFELEIVYLYLSAAICLVICG GGEFVLIRD >gi|257441603|gb|ACYG01000028.1| GENE 15 13612 - 18126 5351 1504 aa, chain - ## HITS:1 COG:Cj0479 KEGG:ns NR:ns ## COG: Cj0479 COG0086 # Protein_GI_number: 15791843 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Campylobacter jejuni # 5 1504 2 1515 1517 2322 76.0 0 MSDNSNLERIEIKEDARVHDFDAFAIRLASPEQIKAWSHGEVKKPETINYRTLKPERDGL FCAKIFGPVRDYECICGKYKKMRYKGWKCEKCGVEITSSKVRRTRMGHIELVTPVAHIWY VNSLPSRIGTLLNIKMKDLERVLYYEAYIVESAGEAFYDNENSKKVEKYDVLNEEQYQSL KERFSQTGFVAKMGGQVIRDMLAELDLVEILNSLKEEMANTNSEAKKKTIVKRLKVVESF LNSGNKPEWMMITNLPVLPADLRPLVSLEGGKFAVSDVNDLYRRVINRNSRLKRLMELDA PEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRV DFSGRSVIVVGPNLRMDQCGLPKTMALELFKPHLIARLQEKGYATTVKQAKKMIENRINE VWECLEEVVKDHPVMLNRAPTLHKMSIQAFHPVLVEGKAIRLHPLVCAAFNADFDGDQMA VHVPLSQEAIAECKILMLSSMNILLPASGKPVAVPSQDMVLGIYYLSLEKPGAKGTNKIF ANVDEVMLAVEANALDIHAKIKTMIDRRIIFTTAGRLIIKSILPSFIPDHLWNKIMKKKD IAELVDYVYKNGGLEISAEFLDNLKNLGFESATKAGVSISVSDIIVPKSKPGLVEEAKKQ VREVQNQYGAGLLTDGERYNKTIDIWTSTSKKLADEMMKMMEKDKDGFNSIYMMADSGAR GSAEQIKQLAGMRGLMSKPDGSIIETPITSNFREGLNVNEYFISTHGARKGLADTALKTA NAGYLTRKLIDVAQNVRITMHDCGTHEGIEVTEIVENGTQIESLADRIMGRVLSSDVIDP VSNEILFTEGMLLGVNEVRTIVDAGIKSVSIRTPITCKAEKGVCAKCYGVNLGEGKLVKP GEAVGIISAQSIGEPGTQLTLRTFHAGGTASTEQQDRQVIADKEGFIRYYNVKTYENGGK NIVMNRRNAAVLLVEPKIKAPITGKVSIDITHDDVNITLKGKKEEFKYTIRRHDLAKPTE LAGVSGKVEGKFYIVFKDGETVGENDSLVEVIKEDWNIPTRIPFASELRVKDGEPVTQKI KAGANGTLKYFILKGDYLERLRDIKKGHVVSEKGMYVVISDENGREAIRHYIPRESVITY DDNSVVKSDDLIAKPKKDDRLIIAEWDPYSIPVAAECEGKISFEDIEPGYTATEQYDETT GQSRLVINEYLPQGVKPAIIVTPSKGEPIKYNLGPKTAIFTDKGDQVAIADILARTPKAA AKSKDITGGLPRVSELFEARRPKNTAIIADIDGTVRFDKALRAKERIVIEGEDGTSAEYL IDKSRQIQVRNGEFVHAGEKLTDGVISSHDVLRILGEKALHYYLISEIQQVYRSQGVVIS DKHIEIIVSQMLRQVRIVDSGDTQLIVGDLISRRRFREENERIMKIGGEPAIAESVLLGV TRAAVGSDSVISAASFQETTKVLTEASIAGKFDRLEDLKENVILGRIIPVGTGLYKDKEV KLKK >gi|257441603|gb|ACYG01000028.1| GENE 16 18123 - 22259 3164 1378 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1371 6 1387 1392 1223 47 0.0 MLNSLYSGNRLRVDFSKVPKDIEIPNLLQLQKKSFDHFLNLDNSGGESGIEKVFKAIFPI HDAQNRLSIEYVSSEISKPKYSIRECMERGLTYSVNLKMKLRLLVHERDEKTGKKIGVKE IKEQDIFIRDIPLMTDRISFIINGVERVVVNQLHRSPGVIFKEEESPTVLNKLIYTAQII PDRGSWLYFEYDVKDVLYVRINKRRKVPITILFRALGYKKQDIIKLFYPIKTIYIKKGKF LTDFDPKEYAGRLDYDIISEKGEVLHQASKRLTVKKAEKLAEDGLKLIEYPAEILAERYL ADAIVDKNSGEVLFDSLTALDEGKLAKIANTEKKFTIANDLASGVDTSIINSFIQDADAL KLLQQSEGIDDENDLAAIRIYKVMRPGEPVVKEAAKSFVNDLFFNPERYDLTKVGRMKMN HKLGIEAPEYVTVLSSEDIIKTAKYLIRVKNGDGFIDDRDNLGNRRIRSIGELLANEMHL GFIKVQKAIKDKFTGISGNLDELMPYDFVNPKIITTTLMEFFTGGQLSQFMDQTNPLSEV THKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYAKVNDL GFVEAPYKKVVNGKVTDEIVYLTATQEEGLVIAPASAKLDEEGNIVEELLEVRKDGENIM AKREDISLIDLCSGMVAGVAASLIPFLEHDDANRALMGSNMQRQAVPLLHSTAPIVGTGM EAIIARDSWEAIKANRDGVVEKVDNKNIFILGEDEKGPFIDHYSMEKNLRTNQNTTFSQR PIVRKGDVIKAGQIIADGPSMDGGELAIGKNALIAFMPWHGYNYEDAVVMSEKMIRADEY TSVHVYEKEIEARELKDGVEEITRDIPNIKEEELTHLDDSGIVKIGTHVKPGMILVGKVT PKGEVKPTPEERLLRAIFGEKAGHVVNKSLYATASMEGVVIDVKIFTKKGYEKDPRTNKA YEDEKTELEREHHDRLLMLDREEMLKVVALLSKSALQSDQSLNKKDYKKGDKVKKEELES SNRFTLNSFVKAYSKAVQKEYEELKNHFQNEKRKLKEEHDEKIEILEKDDILPSGVVKLV KVYIATKRKLKVGDKMAGRHGNKGIVSNIVPEVDMPYLPSGQRVDIVLNPLGVPSRMNIG QIMESHLGLVGWRLGEQIAKILEEKTGEWIKTLRAKMIEIAGVSKLMQAKKTLEKISDED LLKYARDWAKGVRFSAPIFEGIVPEDFKKLFEMAGIDQDGKTELYDGRTGEKIKERVNVG CMYYLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAYTLR EMLTIKSDDVDGRLAAYKALTKGENVPSTGIPETFFVLTNELKSLALDVEIYENGENK >gi|257441603|gb|ACYG01000028.1| GENE 17 22350 - 22730 526 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165629|ref|YP_001466544.1| 50S ribosomal protein L7/L12 [Campylobacter concisus 13826] # 1 126 1 125 125 207 87 1e-52 MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGAAAGGAGAAAAEEKTEF DVVLLDAGDKKINVIKVVRALTGLGLKEAKDATEATPSVLKEGLNKEDAEKAKKELEEAG AKVELK >gi|257441603|gb|ACYG01000028.1| GENE 18 22751 - 23230 620 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148718|ref|YP_001407182.1| 50S ribosomal protein L10 [Campylobacter hominis ATCC BAA-381] # 1 157 1 157 157 243 76 1e-63 MTRDEKSKIVAELGEAFKASEAIVISDFKGLSVKQLEDLRNSAREAGVKVRVIKNTLANI ALKNAEKNGLSFKDTNIFLWGEQLSVCKVAAKFEEKNEIFKLKIAHIDGEVAGVDKVRAL SKMPSRDELIAMLLQVWNAPIQNFTIGLNALKQKKEASA >gi|257441603|gb|ACYG01000028.1| GENE 19 23344 - 24045 987 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|222823476|ref|YP_002575050.1| 50S ribosomal protein L1 [Campylobacter lari RM2100] # 1 233 1 233 233 384 81 1e-106 MPKNSKRFNELLKKVDVNKIYSVDEAVSTVKALASAKFDETVEIALKLNVDPRHADQMVR GSVVLPAGTGKSVRVAVIAKDAKASEASEAGADIVGADDLIEEIQKGNINFDVLIATPNL MGLVGKVGRILGPKGVMPNPKTGTVTMDVAQAVKNAKGGQVNFRVDKQGNIHAGLGKASF SKEQLLDNLTTFIKTINKHKPATAKGRYVTHASLSLTMSPAVTLDNQEIIDLK >gi|257441603|gb|ACYG01000028.1| GENE 20 24102 - 24527 635 141 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223038861|ref|ZP_03609153.1| ribosomal protein L11 [Campylobacter rectus RM3267] # 1 141 1 141 141 249 87 2e-65 MAKKVVGEIKLQIAAAKANPSPPVGPALGQKGVNIMEFCKAFNERTKDMAGFNIPVIITV YADKSFTFITKQPPATDLIKKAAKIDKGSDNPLKKKVASLTKAQVLEIVEKKIADLNTKD REQAARIIAGSARSMGITVTD >gi|257441603|gb|ACYG01000028.1| GENE 21 24548 - 25078 561 176 aa, chain - ## HITS:1 COG:Cj0473 KEGG:ns NR:ns ## COG: Cj0473 COG0250 # Protein_GI_number: 15791837 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Campylobacter jejuni # 3 176 4 177 177 250 72.0 1e-66 MANKWYAIQTYAGSEMAVKRAIEALKQDEALEAKIGEVLVPTEDVIEVKNTKQTIKERSL YPGYCFANLDLDTTLWHRIQMLPKVSRFIGEAKKPSALPEKDIEIILEKINNREAPKPKI NFDEGETVRIIDGPFANFNGIVEEYDMIHGKLRLNVSIFGRSTPIEISYSQVEKII >gi|257441603|gb|ACYG01000028.1| GENE 22 25093 - 25266 146 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460974|ref|ZP_05626074.1| ## NR: gi|257460974|ref|ZP_05626074.1| preprotein translocase, SecE subunit [Campylobacter gracilis RM3268] preprotein translocase, SecE subunit [Campylobacter gracilis RM3268] # 1 57 1 57 57 66 100.0 6e-10 MEKVKEYYKQAKVELDKVIFPTKDQTKTAYISVVVVVVVIALFLALVDLIMSALITA >gi|257441603|gb|ACYG01000028.1| GENE 23 25362 - 25535 256 57 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154149108|ref|YP_001407187.1| 50S ribosomal protein L33 [Campylobacter hominis ATCC BAA-381] # 1 56 1 56 56 103 80 2e-21 MAKNSSRVKVGLKCSESGDINYTTYKNSKTTTEKLELKKYCPRLKKHTLHKEVKLKG >gi|257441603|gb|ACYG01000028.1| GENE 24 25592 - 26791 1450 399 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 398 1 406 407 563 68 1e-160 MAKEKFNRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRKGLAELKDYDNIDNAPEEKERG ITIATSHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLSRQVGVPYIVVFLNKTDMVDDPDLLELVEEEVRDLLKEYKFPGDETPIIKGSALKALE EAKAGQDGEWSAKIMELMDAVDSYIPTPVRDTDKDFLLPIEDIFSISGRGTVVTGRIEKG IVKVGDTIEIVGIKPTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVERGMVLCK PKSITPHTKFEGEVYILTKEEGGRHTPFFNNYRPQFYVRTTDVTGSITLPEGTEMVMPGD NVKITVELIAPIALEQGTRFAIREGGHTVGSGVVSKIIA >gi|257441603|gb|ACYG01000028.1| GENE 25 26748 - 26996 59 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFTCGLLRLNFSLAIISSVIDLWITQQTKRLYFMELIAGLEPATSSLPRKCSTSEPYEPK LRQREIATNTQQCNQNLDYVSI >gi|257441603|gb|ACYG01000028.1| GENE 26 27448 - 27660 443 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460977|ref|ZP_05626077.1| ## NR: gi|257460977|ref|ZP_05626077.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 70 29 98 98 107 100.0 2e-22 MKIVPWIIIVFMIYLIYYFISRSEKRLNTLEKRLNKIEENLSELKKATEANRLLIEEAKL DSEDDAKEQE >gi|257441603|gb|ACYG01000028.1| GENE 27 27936 - 28145 158 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460979|ref|ZP_05626079.1| ## NR: gi|257460979|ref|ZP_05626079.1| hypothetical protein CAMGR0001_1801 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1801 [Campylobacter gracilis RM3268] # 1 69 1 69 69 115 100.0 1e-24 MPHKIKILPKSIPQFNFLKFCANPSAKIINYKILVFKIILINPTAAAKLMGSTARHFRLI YQKAQKCRP >gi|257441603|gb|ACYG01000028.1| GENE 28 28277 - 29581 1034 434 aa, chain - ## HITS:1 COG:Cj0991c KEGG:ns NR:ns ## COG: Cj0991c COG0247 # Protein_GI_number: 15792318 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Campylobacter jejuni # 11 426 3 421 421 518 59.0 1e-147 MSRAKLGAFDFAALSERCVKCGKCIQICTIHGINGDEVTSPRGFVDLLGAYGRNELKLDK NAKKIFESCFLCTICVDICGESLPIDTAIENIRAHIAEKFGIAWYKKAAFWLLGHRKALD LAAALGYVFFSCGFKMRKDTQSSMSPRFGLPILKKERLLPAPAKKSFMNSHAEFIDNGGE KTIGIFIGCMANYAYTGVGEAVLHIARALKLNVNLMKEQACCGAPAYFTGDFAAVERVAK FNIAYFEKALPALDAIIVPEATCSAMLRVDYAHFFENEPQWKARAQKLASKIFMASEYFY KFTNLSDLLMRRGKRALAITYHDPCHARKMQGIWKEPRGLLAQNYEITEMDEPNKCCGFG GVTMQTERYELARAVGLAKARAMADLPVRVVSAECSACRMQLNNSLSLSGSQIRCVNPLE LIAEALMSEKNSNG >gi|257441603|gb|ACYG01000028.1| GENE 29 29593 - 30957 1344 454 aa, chain - ## HITS:1 COG:Cj0992c KEGG:ns NR:ns ## COG: Cj0992c COG0635 # Protein_GI_number: 15792319 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Campylobacter jejuni # 5 454 3 451 451 611 66.0 1e-175 MNSIDFDAYAKFSRPGPRYTSYPTALEFSESFSYDGYLNELKNQKSSTPLSLYFHMPFCR SACYFCGCNVIYTGKRDKMDRYLDYIEREMQILSGVVDGSRQVVQMHFGGGTPTYFSAEQ LARHIKNIKKYFTNFSSEAEISCEIDPRFLNAEQLDVLVSNGFNRISYGVQDFDERVQKG IHRIQPFELTRDVIAMARERGIKSINMDLIYGLPYQSLASFKRTLELALSLDPDRFAIFN YAHVPWIKKSMRKFDETTLPEPKVKLEILKFTHDFLSANGYEMIGMDHYSKPADELHAAL KNGSLHRNFQGYTTKGGADLIGIGLTSIGEGARHYAQNFKDMDAYEAAIDAGRLPYCRGV LLNEEDLLRKEVIMGLMSNFCVDIEAIEEKFKIKFFEHFDVSLKQLEALKDFVQVSPHRI SVTPTGTLLIRNIAMCFDEYMVKNLGEKRFSKTV >gi|257441603|gb|ACYG01000028.1| GENE 30 30950 - 31432 561 160 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1696 NR:ns ## KEGG: CHAB381_1696 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 153 2 152 156 170 58.0 1e-41 MEEKDKALKKIDKASEFFGLDSSKRTVFEISQGEDNEKKLTLKSGSWSDEEPWFGIDENN EVHTMISIKSLANLIAATKNAMQENFNLKLERSILQHTPVDFGDAWIVCMDEIRRLTGAN PSAKRLSLDVDAVVSRVKSLHPNLFIDIEELIKTKAGGRE >gi|257441603|gb|ACYG01000028.1| GENE 31 31447 - 32370 875 307 aa, chain - ## HITS:1 COG:Cj0994c KEGG:ns NR:ns ## COG: Cj0994c COG0078 # Protein_GI_number: 15792321 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Campylobacter jejuni # 1 307 1 303 306 340 55.0 2e-93 MRHFLTLNDFSKDEIIEILNLAFEIKKEAKARNFKPYLKDQKLAMIFEKSSTRTRVSFDV GMNELGGHALFLSSRDIQLGRGEPIKDTARVISRMCDLIMARVNRHETLMQLAEFSCVPV INGLSDKFHPVQLMADLMTIVERGIETPKIKAAYVGDGNNMAHSWLMLASKLGFELRIAT PKGYEADPQILAQAQENAKISGAKILITNDIKEAVAGANVVTTDTWVSMGQEAEKEQRIR DFAGFCVDESLMALAGSGAIFLHCLPAYRGYEVSEAVFEAHADEIFAEAENRLHAQKGVM VWLDRKR >gi|257441603|gb|ACYG01000028.1| GENE 32 32367 - 32759 286 130 aa, chain - ## HITS:1 COG:alr9029 KEGG:ns NR:ns ## COG: alr9029 COG3654 # Protein_GI_number: 17227494 # Func_class: R General function prediction only # Function: Prophage maintenance system killer protein # Organism: Nostoc sp. PCC 7120 # 1 125 2 126 128 60 30.0 9e-10 MKYLTLHQAIFIHDKMLEKIGGSKGYNKTSLSYLSSALQNIKNDLYYPTMADKLAHLTHS CIKFHPFTDGNKRTAILLADMFLSANSIILDDEEFYAAMEDIVVKVAAGDMTKGDLKEFF SKFIKDKGAI >gi|257441603|gb|ACYG01000028.1| GENE 33 32770 - 32985 265 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257460985|ref|ZP_05626085.1| ## NR: gi|257460985|ref|ZP_05626085.1| hypothetical protein CAMGR0001_1807 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1807 [Campylobacter gracilis RM3268] # 1 71 1 71 71 95 100.0 9e-19 MNKIALEIKSNEMEAVLDAVMKLAKKMKFEAKILSENKDECIENFGELSSAIIAKLDKPS NRAVFERLKDK >gi|257441603|gb|ACYG01000028.1| GENE 34 32988 - 33962 1221 324 aa, chain - ## HITS:1 COG:Cj0995c KEGG:ns NR:ns ## COG: Cj0995c COG0113 # Protein_GI_number: 15792322 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Campylobacter jejuni # 1 321 1 323 327 467 68.0 1e-131 MFKRFRRLRINPVLRDLVRQTDLQTRFLIYPLFVVEGSGIKKEIASMPGVFQMSLDEILK ECEALISLGLDKILLFGIPSLKDSIGSDALSEDGIIATSLRAIKAKFPNLLVITDLCFCE YTDHGHCGIIDHVHQTVDNDATLEISAQQALIHAKAGADMIAPSGMMDGIISTLRETLDR GGFENLPIMAYSSKFASGYYGPFRDVAESAPSFGDRSSYQMDPANRFEAINESLQDEAQG ADILMMKPALAYLDLIRDLRERTLLPICAYNVSGEYSLLQAGKKAGVIDYERVMMETMIG IRRAGADMIITYHAKEIAEILNRG >gi|257441603|gb|ACYG01000028.1| GENE 35 34026 - 34586 668 186 aa, chain + ## HITS:1 COG:Cj0996 KEGG:ns NR:ns ## COG: Cj0996 COG0807 # Protein_GI_number: 15792323 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Campylobacter jejuni # 1 185 1 185 186 281 71.0 4e-76 MDIKISEVANLPSRFGSFRVQSFKQGEKEHLVIFKQPLEGIVNVRIHSECLTGDAIGSLK CDCGEQLEASLKYIEARGGMVIYLRQEGRNIGLFNKINAYALQDQGLDTIEANHQLGFKA DERTYEIVDFILAHFGISRINLLTNNPQKLHDLKVEVVARVPIIITPNKFNENYLRVKKE QMGHLL >gi|257441603|gb|ACYG01000028.1| GENE 36 34583 - 35161 420 192 aa, chain + ## HITS:1 COG:Cj0997 KEGG:ns NR:ns ## COG: Cj0997 COG0357 # Protein_GI_number: 15792324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Campylobacter jejuni # 7 189 15 188 188 126 41.0 3e-29 MKLAPGEHFNEQVAKFKACLQKFNRVHSLTNYDDLDAVVCDSLSGVNFIPRYPRIACDIG SGAGFPGIFLALAMPLCEWHLFEPNQKKAAFLTYAKVSLALTNVKIHAERVQDGAKLRAD LISSRALMSAQSLIEICRGFYNQNTTFLLYKGSGAEAEAAEFRKEFTSARCEIFSGENAL KNRKFLVIKGVK >gi|257441603|gb|ACYG01000028.1| GENE 37 35161 - 35367 293 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460989|ref|ZP_05626089.1| ## NR: gi|257460989|ref|ZP_05626089.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 68 1 68 68 119 100.0 1e-25 MGKILAVAVIAALIYFLIVPRFRIKKKDDATELLACDECGTYFSSDELALRDKKRLCKSC EAKLRGGK >gi|257441603|gb|ACYG01000028.1| GENE 38 35364 - 35906 795 180 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1702 NR:ns ## KEGG: CHAB381_1702 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 119 1 119 150 110 53.0 2e-23 MIILGHALVPYEPLYLIKNGDEVFKYDNLLFKFNDRLIAAAQKAQKKFSVITNDINEILL ANGAGARFIVVDKKSAAVAQKLANDYLFDAKIAMFIGSARALKALAELGIDAAIFKDAIA NAPKSLLASIGDSVGSKFHFGLPKKDEIFGGAQKLADKISALDKKLSAPAAGKNDDIWKK >gi|257441603|gb|ACYG01000028.1| GENE 39 36521 - 37678 968 385 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 33 351 26 348 380 158 33.0 2e-38 MGLCAGLLNFGINEIETFAFGHNDEEFHIVTEQTTELRRFLSVLAAGAIVTLIRILLIRL KPFLNVSSMMEGRNPPFWQNLIHSVLQLAAIAMGAPVGSEAAPRELGGLFAAKICRALNI SGDELRLFVACGAGAGLGAVYNVPLAGALFSLEILLKSFDTRAILCAFATSAVATATAEF GASKEIYYAVSNFAPTPQNLIAAAIIGLVTGVAAKYFQDGVRLCEKWRIKSLKIALTLPF AFLLTAAIGAYVPEILGNGRSAAQFAFNSASFSPYLLAILLCKAFCILMIFRCGGYGGTL TPSFALGAVLGLCVGFAIGEILPINLSAAGVCGGAAFLAINLNAPLCAFALSAGFCGLNL NSYSVVVFSIVCAVIARNLLTKNLA >gi|257441603|gb|ACYG01000028.1| GENE 40 37877 - 38299 781 140 aa, chain + ## HITS:1 COG:RSc2148 KEGG:ns NR:ns ## COG: RSc2148 COG1652 # Protein_GI_number: 17546867 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Ralstonia solanacearum # 1 140 1 160 160 95 38.0 3e-20 MGLLSFVAEAGKKLLGLGDDAKSVKDEIATNLSSTPVEGLEVEVQGDTVKISGNANKETL EKAALIAGNTAGIKNVQIEGIREDSAENYYTIVKGDNLSKIAKKFYGDANKYKVIFDANR EVIKDANLIYPGQKIRIPKI >gi|257441603|gb|ACYG01000028.1| GENE 41 38526 - 39152 393 208 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257460995|ref|ZP_05626095.1| ## NR: gi|257460995|ref|ZP_05626095.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 208 1 208 208 377 100.0 1e-103 MDKFKISTTLEKANPRDYDKYPIIIKDNAIEMIKLYLPFLFLLDIISYLSPYRHPGELTR RPKELGSCYIKFKNSAIEYFSTKKNLILFKIELSNIVEIKRTFGPSEFQSPIATKKFGFC VVMIYFVLMSAVFYFKGYAIAPFIVPIAFGLGMFPLLIFRIINGLGLGLDMLSGDSLIIF DKHFIIDASILTSREYQELKTYFFTKNG >gi|257441603|gb|ACYG01000028.1| GENE 42 39362 - 40420 1166 352 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1735 NR:ns ## KEGG: CHAB381_1735 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 140 352 91 320 330 133 34.0 2e-29 MTIYDLERLRLDAKKHVEQLKLVAVISTIALFAVFGVIAYFADRRGAQSLSATMLMLLAV ASLAVSLKEVHLNGWQKDLIGTENILKFGAVAISFLIFKYSAALPQALIGLAALTLGAWL ARELYALGVKSMQEIFTGRYRQSYKQHYLAPFVRELGYEYVSYGSVPFWRVVQSDLFEFI ENLRGNDRVGGAWQGVSFEFSDVSFFHQNLQHELVGAFFVAEFNKHIIAPVFIYPREIQN KQHVGLKPVAMDNVEFAARYKVLSDEPQNAMYVLTPAFMERFLAVGDALGAQIWASIRER RIHIFVHTGRDNFEPSVYESVLRRDPASEIKSEILSFLSIVKILKLNVRIWI Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:51:31 2011 Seq name: gi|257441602|gb|ACYG01000029.1| Campylobacter gracilis RM3268 contig00007, whole genome shotgun sequence Length of sequence - 613 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 611 96.0 # CP000487 [D:135975..138755] # 23S ribosomal RNA # Campylobacter fetus subsp. fetus 82-40 # Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter. Prediction of potential genes in microbial genomes Time: Wed Jun 29 07:52:23 2011 Seq name: gi|257441372|gb|ACYG01000030.1| Campylobacter gracilis RM3268 contig00003, whole genome shotgun sequence Length of sequence - 197819 bp Number of predicted genes - 175, with homology - 175 Number of transcription units - 99, operones - 40 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 61 - 110 12.1 1 1 Tu 1 . - CDS 118 - 1890 2296 ## CCC13826_0901 fructose-bisphosphate aldolase (EC:4.1.2.13) - Prom 1992 - 2051 5.9 + Prom 1929 - 1988 7.7 2 2 Tu 1 . + CDS 2079 - 2288 340 ## CCC13826_2113 hypothetical protein (EC:5.3.2.-) - Term 2523 - 2587 8.0 3 3 Op 1 . - CDS 2662 - 2928 348 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 4 3 Op 2 . - CDS 2998 - 3957 991 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 4203 - 4262 3.7 5 4 Tu 1 . - CDS 4291 - 4941 338 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 4990 - 5049 1.8 - Term 5075 - 5103 -0.9 6 5 Op 1 . - CDS 5129 - 5602 631 ## CCV52592_0503 hypothetical protein 7 5 Op 2 . - CDS 5624 - 7207 1447 ## CCC13826_1906 flagellar biosynthetic protein FliQ - Prom 7232 - 7291 4.1 - Term 7275 - 7319 6.1 8 6 Op 1 . - CDS 7327 - 7926 872 ## COG3477 Predicted periplasmic/secreted protein - Prom 7958 - 8017 7.8 9 6 Op 2 . - CDS 8198 - 9349 951 ## COG0477 Permeases of the major facilitator superfamily - Prom 9374 - 9433 8.3 - Term 9667 - 9706 2.7 10 7 Tu 1 . - CDS 9911 - 11011 876 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 11108 - 11167 12.4 + Prom 11077 - 11136 9.6 11 8 Op 1 27/0.000 + CDS 11185 - 12318 1535 ## COG0845 Membrane-fusion protein 12 8 Op 2 9/0.000 + CDS 12318 - 15476 3277 ## COG0841 Cation/multidrug efflux pump 13 8 Op 3 . + CDS 15463 - 16920 1046 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 + Term 16990 - 17036 8.1 + TRNA 17298 - 17385 63.0 # Ser GGA 0 0 + Prom 17648 - 17707 5.0 14 9 Op 1 . + CDS 17733 - 18686 1141 ## COG2837 Predicted iron-dependent peroxidase 15 9 Op 2 . + CDS 18714 - 19328 751 ## gi|257461020|ref|ZP_05626118.1| hypothetical protein CAMGR0001_0146 16 9 Op 3 . + CDS 19333 - 19653 304 ## gi|257461021|ref|ZP_05626119.1| putative TPR domain protein + Prom 20025 - 20084 3.2 17 10 Tu 1 . + CDS 20204 - 20935 391 ## gi|257461024|ref|ZP_05626122.1| hypothetical protein CAMGR0001_0150 + Term 20959 - 21015 5.0 - Term 21114 - 21170 7.5 18 11 Tu 1 . - CDS 21229 - 23955 3017 ## CCV52592_2212 putative TonB dependent receptor - Prom 23988 - 24047 9.8 - Term 24227 - 24276 -1.0 19 12 Tu 1 . - CDS 24286 - 27027 2103 ## COG0612 Predicted Zn-dependent peptidases - TRNA 27762 - 27849 66.4 # Ser TGA 0 0 20 13 Tu 1 . - CDS 27907 - 28062 124 ## CCV52592_2099 hypothetical protein - Prom 28212 - 28271 2.2 - TRNA 28083 - 28156 74.9 # Cys GCA 0 0 - TRNA 28173 - 28259 75.4 # Leu TAA 0 0 - TRNA 28287 - 28361 83.8 # Gly GCC 0 0 + TRNA 28495 - 28570 83.8 # Ala GGC 0 0 + Prom 28852 - 28911 7.2 21 14 Tu 1 . + CDS 29030 - 29395 487 ## CCC13826_1678 putative aminotransferase + Prom 29405 - 29464 4.0 22 15 Op 1 . + CDS 29519 - 29908 253 ## gi|257461031|ref|ZP_05626129.1| hypothetical protein CAMGR0001_0162 23 15 Op 2 . + CDS 29901 - 30422 472 ## CCC13826_1690 hypothetical protein 24 15 Op 3 . + CDS 30467 - 30856 491 ## gi|257461033|ref|ZP_05626131.1| hypothetical protein CAMGR0001_0164 25 15 Op 4 . + CDS 30905 - 31279 332 ## gi|257461034|ref|ZP_05626132.1| coproporphyrinogen III oxidase 26 15 Op 5 . + CDS 31320 - 32072 417 ## gi|257461035|ref|ZP_05626133.1| hypothetical protein CAMGR0001_0166 27 15 Op 6 . + CDS 32086 - 32712 517 ## gi|257461036|ref|ZP_05626134.1| hypothetical protein CAMGR0001_0167 28 15 Op 7 . + CDS 32732 - 32953 230 ## CCC13826_1947 hypothetical protein + Prom 32968 - 33027 6.3 29 15 Op 8 . + CDS 33051 - 33965 956 ## CHAB381_1734 hypothetical protein 30 16 Tu 1 . - CDS 34174 - 36546 2929 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 36679 - 36738 5.9 - Term 36875 - 36921 4.4 31 17 Tu 1 . - CDS 36930 - 38378 1700 ## CHAB381_0359 hypothetical protein - Prom 38409 - 38468 7.0 + Prom 38432 - 38491 4.8 32 18 Op 1 3/0.000 + CDS 38517 - 40148 2135 ## COG0504 CTP synthase (UTP-ammonia lyase) 33 18 Op 2 . + CDS 40138 - 41718 1830 ## COG0608 Single-stranded DNA-specific exonuclease + Term 41732 - 41779 4.2 - Term 42133 - 42177 -0.6 34 19 Tu 1 . - CDS 42191 - 42520 451 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 35 20 Op 1 . - CDS 42587 - 45148 1250 ## COG3213 Uncharacterized protein involved in response to NO 36 20 Op 2 7/0.000 - CDS 45141 - 45830 909 ## COG4525 ABC-type taurine transport system, ATPase component 37 20 Op 3 21/0.000 - CDS 45830 - 46627 816 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 38 20 Op 4 . - CDS 46621 - 47580 1024 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Prom 47627 - 47686 4.4 + Prom 47873 - 47932 6.2 39 21 Op 1 . + CDS 47955 - 50426 2122 ## COG2189 Adenine specific DNA methylase Mod 40 21 Op 2 . + CDS 50433 - 53258 1701 ## C8J_0265 hypothetical protein 41 21 Op 3 . + CDS 53309 - 54982 2347 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 42 21 Op 4 . + CDS 55038 - 56621 695 ## gi|257461055|ref|ZP_05626153.1| putative membrane protein 43 22 Tu 1 . - CDS 56661 - 56837 86 ## gi|257461056|ref|ZP_05626154.1| biotin carboxyl carrier protein - Prom 56932 - 56991 2.2 44 23 Tu 1 . - CDS 57086 - 58351 1709 ## COG0065 3-isopropylmalate dehydratase large subunit - Prom 58377 - 58436 5.7 45 24 Op 1 . + CDS 58449 - 58973 546 ## COG0778 Nitroreductase 46 24 Op 2 . + CDS 58979 - 60301 984 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP 47 24 Op 3 15/0.000 + CDS 60351 - 61115 924 ## COG0575 CDP-diglyceride synthetase 48 24 Op 4 . + CDS 61109 - 62194 1212 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase + Term 62311 - 62341 -1.0 + Prom 62230 - 62289 3.4 49 25 Tu 1 . + CDS 62384 - 63358 676 ## CHAB381_1736 putative galanin + TRNA 63753 - 63828 77.2 # Val GAC 0 0 + Prom 63755 - 63814 80.4 50 26 Op 1 . + CDS 64063 - 64332 237 ## Caci_3518 hypothetical protein 51 26 Op 2 . + CDS 64364 - 64684 334 ## CCC13826_1688 hypothetical protein + Prom 64705 - 64764 2.8 52 27 Op 1 . + CDS 64790 - 65194 249 ## CCC13826_1940 NADP-dependent malic enzyme (NADP-me) (EC:1.1.1.40) 53 27 Op 2 . + CDS 65227 - 65655 291 ## gi|257461067|ref|ZP_05626165.1| putative adenylate kinase + Term 65696 - 65739 1.2 + Prom 65912 - 65971 4.4 54 28 Tu 1 . + CDS 66016 - 68088 2266 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 68149 - 68201 0.1 + Prom 68102 - 68161 3.9 55 29 Tu 1 . + CDS 68209 - 69000 1280 ## COG0500 SAM-dependent methyltransferases - Term 68878 - 68914 2.5 56 30 Op 1 . - CDS 69048 - 69254 123 ## COG0824 Predicted thioesterase 57 30 Op 2 . - CDS 69254 - 70255 626 ## Cphamn1_2323 hypothetical protein 58 31 Tu 1 . - CDS 70907 - 71809 758 ## CCC13826_1612 prophage protein GP49 - Prom 71947 - 72006 4.6 59 32 Tu 1 . - CDS 72011 - 72565 659 ## COG1971 Predicted membrane protein - Prom 72590 - 72649 7.2 + Prom 72573 - 72632 7.3 60 33 Op 1 . + CDS 72652 - 73281 716 ## CHAB381_1655 hypothetical protein 61 33 Op 2 . + CDS 73325 - 74854 1210 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 62 34 Op 1 42/0.000 - CDS 74807 - 75610 906 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 63 34 Op 2 . - CDS 75603 - 76370 864 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component - Prom 76397 - 76456 7.7 + Prom 76267 - 76326 4.4 64 35 Op 1 1/0.250 + CDS 76470 - 77384 872 ## COG0500 SAM-dependent methyltransferases 65 35 Op 2 1/0.250 + CDS 77347 - 78219 745 ## COG1858 Cytochrome c peroxidase 66 35 Op 3 . + CDS 78209 - 80629 2106 ## COG2200 FOG: EAL domain - Term 81142 - 81176 -0.0 67 36 Tu 1 . - CDS 81222 - 82730 1565 ## COG0427 Acetyl-CoA hydrolase - Prom 82752 - 82811 6.1 - Term 83605 - 83651 4.1 68 37 Tu 1 . - CDS 83680 - 84198 528 ## gi|257461087|ref|ZP_05626185.1| hypothetical protein CAMGR0001_0219 - Prom 84390 - 84449 3.6 69 38 Tu 1 . - CDS 84464 - 85030 490 ## CCC13826_1720 Sel1 repeat-containing protein - Prom 85050 - 85109 2.8 - Term 85059 - 85110 2.5 70 39 Tu 1 . - CDS 85168 - 85638 604 ## CCV52592_0580 putative BcpB - Prom 85662 - 85721 4.9 + Prom 85653 - 85712 5.8 71 40 Tu 1 . + CDS 85734 - 86816 822 ## CHAB381_0874 hypothetical protein + Term 86818 - 86868 6.6 72 41 Tu 1 . - CDS 87028 - 88038 1453 ## COG2899 Uncharacterized protein conserved in bacteria - Prom 88062 - 88121 5.8 + Prom 88000 - 88059 4.2 73 42 Tu 1 . + CDS 88131 - 89450 1691 ## COG2056 Predicted permease + Term 89478 - 89521 7.1 + Prom 89628 - 89687 5.8 74 43 Tu 1 . + CDS 89709 - 90152 417 ## COG3399 Uncharacterized protein conserved in bacteria 75 44 Op 1 9/0.000 + CDS 90766 - 91575 906 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 76 44 Op 2 9/0.000 + CDS 91598 - 92401 1053 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 77 44 Op 3 9/0.000 + CDS 92467 - 93270 899 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 78 44 Op 4 . + CDS 93287 - 94090 920 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 94140 - 94181 6.1 - Term 94126 - 94167 6.1 79 45 Tu 1 . - CDS 94312 - 95268 662 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 95326 - 95385 4.7 + Prom 95366 - 95425 3.0 80 46 Op 1 . + CDS 95591 - 97348 1435 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 97350 - 97390 -0.4 81 46 Op 2 . + CDS 97399 - 98544 688 ## COG3182 Uncharacterized iron-regulated membrane protein + Term 98604 - 98631 0.1 82 47 Tu 1 . - CDS 98734 - 99666 1261 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 99837 - 99896 5.2 - Term 100127 - 100176 6.0 83 48 Tu 1 . - CDS 100224 - 101408 1542 ## COG0754 Glutathionylspermidine synthase - Term 101681 - 101717 1.9 84 49 Op 1 . - CDS 101767 - 102096 320 ## CFF8240_1659 hypothetical protein - Prom 102118 - 102177 2.5 85 49 Op 2 . - CDS 102186 - 102353 107 ## gi|257461111|ref|ZP_05626209.1| putative lipoprotein 86 49 Op 3 . - CDS 102350 - 102988 731 ## CHAB381_0040 hypothetical protein - Prom 103180 - 103239 10.6 + Prom 103152 - 103211 7.0 87 50 Tu 1 . + CDS 103267 - 103890 716 ## COG1309 Transcriptional regulator + Term 104137 - 104176 2.1 + Prom 104050 - 104109 6.6 88 51 Tu 1 . + CDS 104217 - 105557 421 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 105624 - 105659 -1.0 89 52 Tu 1 . - CDS 105736 - 106293 506 ## gi|257461117|ref|ZP_05626215.1| hypothetical protein CAMGR0001_0249 - Prom 106330 - 106389 6.5 90 53 Op 1 . - CDS 106401 - 106766 369 ## gi|257461118|ref|ZP_05626216.1| hypothetical protein CAMGR0001_0250 91 53 Op 2 . - CDS 106802 - 107284 367 ## gi|257461119|ref|ZP_05626217.1| hypothetical protein CAMGR0001_0251 92 53 Op 3 . - CDS 107315 - 107719 317 ## gi|257461120|ref|ZP_05626218.1| hypothetical protein CAMGR0001_0252 93 53 Op 4 . - CDS 107760 - 108113 356 ## gi|257461121|ref|ZP_05626219.1| hypothetical protein CAMGR0001_0253 94 53 Op 5 . - CDS 108160 - 108687 419 ## gi|257461122|ref|ZP_05626220.1| hypothetical protein CAMGR0001_0254 95 53 Op 6 . - CDS 108701 - 109108 403 ## gi|257461123|ref|ZP_05626221.1| hypothetical protein CAMGR0001_0255 - Prom 109157 - 109216 2.9 96 54 Tu 1 . + CDS 109604 - 109861 323 ## CCC13826_2193 hypothetical protein + Prom 110062 - 110121 4.7 97 55 Tu 1 . + CDS 110152 - 110997 1032 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 111024 - 111080 6.2 + Prom 111066 - 111125 9.0 98 56 Tu 1 . + CDS 111296 - 113800 2083 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Term 113967 - 114002 3.8 + Prom 113903 - 113962 2.6 99 57 Tu 1 . + CDS 114191 - 116092 1653 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components + Prom 116931 - 116990 1.9 100 58 Tu 1 . + CDS 117010 - 117498 626 ## CCC13826_1714 hypothetical protein + Term 117678 - 117722 0.8 101 59 Op 1 3/0.000 - CDS 117510 - 118577 1375 ## COG0216 Protein chain release factor A 102 59 Op 2 . - CDS 118602 - 118874 372 ## PROTEIN SUPPORTED gi|157165436|ref|YP_001465967.1| 30S ribosomal protein S20 - Prom 118990 - 119049 7.6 + Prom 118946 - 119005 6.9 103 60 Op 1 3/0.000 + CDS 119027 - 120367 1494 ## COG1109 Phosphomannomutase 104 60 Op 2 . + CDS 120466 - 120927 422 ## COG0597 Lipoprotein signal peptidase 105 60 Op 3 . + CDS 120914 - 121306 441 ## CHAB381_1791 TM2 106 60 Op 4 . + CDS 121316 - 121756 610 ## COG1981 Predicted membrane protein 107 60 Op 5 . + CDS 121821 - 122984 1239 ## COG3004 Na+/H+ antiporter - Term 123051 - 123104 -0.8 108 61 Op 1 . - CDS 123128 - 123655 837 ## COG1335 Amidases related to nicotinamidase 109 61 Op 2 . - CDS 123655 - 124461 655 ## COG0388 Predicted amidohydrolase 110 61 Op 3 . - CDS 124470 - 124949 473 ## COG0817 Holliday junction resolvasome, endonuclease subunit - Prom 125048 - 125107 5.7 + Prom 124891 - 124950 8.0 111 62 Op 1 16/0.000 + CDS 125060 - 126388 1292 ## COG0593 ATPase involved in DNA replication initiation + Prom 126408 - 126467 3.2 112 62 Op 2 5/0.000 + CDS 126545 - 127624 1264 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 113 62 Op 3 . + CDS 127634 - 129946 2302 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 114 62 Op 4 . + CDS 129946 - 131376 966 ## COG2200 FOG: EAL domain 115 62 Op 5 . + CDS 131376 - 131756 239 ## COG0780 Enzyme related to GTP cyclohydrolase I 116 62 Op 6 . + CDS 131753 - 132988 1210 ## COG1896 Predicted hydrolases of HD superfamily 117 63 Op 1 . + CDS 133137 - 133556 528 ## CFF8240_0007 hypothetical protein 118 63 Op 2 . + CDS 133621 - 135423 2475 ## COG1217 Predicted membrane GTPase involved in stress response + Term 135450 - 135492 10.5 + Prom 135452 - 135511 8.9 119 64 Tu 1 . + CDS 135536 - 136123 716 ## COG0560 Phosphoserine phosphatase + Term 136168 - 136213 1.3 - Term 136491 - 136529 -0.1 120 65 Tu 1 . - CDS 136533 - 137345 837 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 137370 - 137429 8.9 121 66 Tu 1 . + CDS 137263 - 137478 94 ## gi|257461156|ref|ZP_05626254.1| hypothetical protein CAMGR0001_0289 122 67 Tu 1 . - CDS 137570 - 138373 934 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 138441 - 138500 7.0 + Prom 138373 - 138432 5.9 123 68 Tu 1 . + CDS 138471 - 139499 922 ## gi|257461158|ref|ZP_05626256.1| hypothetical protein CAMGR0001_0291 - Term 139771 - 139815 -0.3 124 69 Tu 1 . - CDS 139881 - 140462 615 ## CCC13826_2145 hypothetical protein - Prom 140485 - 140544 6.4 + Prom 140488 - 140547 5.7 125 70 Op 1 7/0.000 + CDS 140590 - 141156 740 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 126 70 Op 2 . + CDS 141170 - 143617 2838 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 143789 - 143827 -0.6 127 71 Tu 1 . + CDS 144075 - 144581 473 ## gi|257461164|ref|ZP_05626262.1| conserved hypothetical protein - Term 144735 - 144773 0.5 128 72 Tu 1 . - CDS 144864 - 145388 454 ## COG2077 Peroxiredoxin - Prom 145413 - 145472 4.7 + Prom 145398 - 145457 2.8 129 73 Op 1 . + CDS 145478 - 146956 1276 ## gi|257461166|ref|ZP_05626264.1| TM2 domain protein 130 73 Op 2 . + CDS 147017 - 147460 393 ## COG3152 Predicted membrane protein + Term 147466 - 147503 -0.7 + Prom 147587 - 147646 7.6 131 74 Tu 1 . + CDS 147678 - 148190 871 ## COG3721 Putative heme iron utilization protein + Term 148195 - 148229 5.6 + Prom 149265 - 149324 3.0 132 75 Op 1 . + CDS 149354 - 149830 414 ## COG1495 Disulfide bond formation protein DsbB 133 75 Op 2 7/0.000 + CDS 149851 - 150459 869 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 134 75 Op 3 . + CDS 150456 - 152972 2983 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 152980 - 153019 -0.9 - Term 153259 - 153294 1.6 135 76 Op 1 . - CDS 153360 - 154172 594 ## CHAB381_0601 hypothetical protein - Prom 154195 - 154254 4.7 136 76 Op 2 . - CDS 154362 - 155675 1424 ## COG0733 Na+-dependent transporters of the SNF family - Prom 155735 - 155794 7.0 137 77 Op 1 . - CDS 156318 - 157655 1367 ## COG1253 Hemolysins and related proteins containing CBS domains 138 77 Op 2 . - CDS 157675 - 157854 86 ## gi|257461179|ref|ZP_05626277.1| hypothetical protein CAMGR0001_0312 139 77 Op 3 . - CDS 157937 - 158746 945 ## COG0501 Zn-dependent protease with chaperone function - Prom 158795 - 158854 7.1 - Term 159703 - 159741 -1.0 140 78 Op 1 . - CDS 159875 - 161134 1565 ## CHAB381_0038 hypothetical protein 141 78 Op 2 . - CDS 161143 - 161403 150 ## CHAB381_0037 hypothetical protein 142 78 Op 3 . - CDS 161381 - 161851 717 ## COG0315 Molybdenum cofactor biosynthesis enzyme - Prom 161961 - 162020 7.8 - Term 162391 - 162429 3.2 143 79 Op 1 . - CDS 162462 - 162908 585 ## gi|257461187|ref|ZP_05626285.1| hypothetical protein CAMGR0001_0320 144 79 Op 2 . - CDS 162909 - 163271 677 ## ELI_4348 protein YegP - Prom 163293 - 163352 6.3 + Prom 163304 - 163363 7.5 145 80 Tu 1 . + CDS 163388 - 163867 477 ## CHAB381_0035 putative periplasmic protein + Term 164106 - 164157 3.1 + Prom 164218 - 164277 7.2 146 81 Op 1 . + CDS 164301 - 165143 1040 ## EUBELI_20127 hypothetical protein 147 81 Op 2 . + CDS 165145 - 166338 1350 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 166417 - 166459 -0.9 + Prom 166364 - 166423 6.8 148 82 Tu 1 . + CDS 166539 - 167924 1561 ## CCV52592_0635 hydrogenase expression/formation protein 149 83 Tu 1 . - CDS 168169 - 168735 470 ## Sph21_0071 hypothetical protein - Prom 168919 - 168978 3.1 150 84 Op 1 . - CDS 168989 - 169315 342 ## gi|257461196|ref|ZP_05626294.1| conserved hypothetical protein 151 84 Op 2 . - CDS 169408 - 170922 1496 ## Sph21_0071 hypothetical protein - Prom 171081 - 171140 7.0 152 85 Op 1 . - CDS 171215 - 171406 57 ## gi|223039188|ref|ZP_03609478.1| conserved hypothetical protein 153 85 Op 2 . - CDS 171387 - 171722 262 ## CCV52592_0751 hypothetical protein 154 86 Tu 1 . - CDS 171870 - 172097 325 ## CCV52592_0751 hypothetical protein - Prom 172149 - 172208 1.8 - Term 172168 - 172201 0.6 155 87 Op 1 16/0.000 - CDS 172213 - 173073 1094 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 156 87 Op 2 34/0.000 - CDS 173094 - 173831 552 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 157 87 Op 3 17/0.000 - CDS 173831 - 174487 805 ## COG0765 ABC-type amino acid transport system, permease component 158 87 Op 4 . - CDS 174490 - 175143 621 ## COG0765 ABC-type amino acid transport system, permease component - Prom 175164 - 175223 10.3 - Term 175254 - 175291 6.2 159 88 Tu 1 . - CDS 175310 - 176782 1387 ## COG0471 Di- and tricarboxylate transporters - Prom 176914 - 176973 7.3 + Prom 177125 - 177184 7.1 160 89 Tu 1 . + CDS 177300 - 177929 633 ## CCC13826_0601 putative outer membrane protein + Term 177951 - 177992 6.2 161 90 Tu 1 . - CDS 178740 - 180071 1338 ## COG0015 Adenylosuccinate lyase - Prom 180110 - 180169 7.4 + Prom 180054 - 180113 8.8 162 91 Tu 1 . + CDS 180147 - 181559 1108 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 181790 - 181832 -0.7 + Prom 181641 - 181700 6.7 163 92 Tu 1 . + CDS 181849 - 182169 326 ## gi|257461211|ref|ZP_05626309.1| hypothetical protein CAMGR0001_0344 + Term 182252 - 182294 -0.2 164 93 Op 1 . - CDS 182382 - 183467 752 ## COG0820 Predicted Fe-S-cluster redox enzyme 165 93 Op 2 . - CDS 183488 - 184033 303 ## CCC13826_1891 bacterioferritin comigratory protein Bcp - Prom 184271 - 184330 5.7 166 94 Tu 1 . - CDS 184386 - 185306 1001 ## COG0107 Imidazoleglycerol-phosphate synthase - Prom 185537 - 185596 8.5 + Prom 185308 - 185367 5.8 167 95 Op 1 3/0.000 + CDS 185398 - 186261 413 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 168 95 Op 2 2/0.050 + CDS 186242 - 188467 2573 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Prom 188595 - 188654 4.9 169 96 Op 1 . + CDS 188845 - 189807 1060 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 170 96 Op 2 . + CDS 189807 - 190577 898 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 171 96 Op 3 . + CDS 190593 - 191066 531 ## COG2606 Uncharacterized conserved protein 172 97 Tu 1 . - CDS 191429 - 191992 771 ## COG1704 Uncharacterized conserved protein - Prom 192080 - 192139 79.6 + TRNA 192063 - 192139 80.2 # Met CAT 0 0 173 98 Tu 1 . + CDS 192399 - 193211 629 ## COG5551 Uncharacterized conserved protein + Term 193289 - 193322 2.1 + Prom 193221 - 193280 1.7 174 99 Op 1 . + CDS 193344 - 195539 1544 ## COG3344 Retron-type reverse transcriptase 175 99 Op 2 . + CDS 195536 - 195808 316 ## Cpha266_2060 CRISPR-associated Cas2 family protein + Term 196008 - 196056 2.0 Predicted protein(s) >gi|257441372|gb|ACYG01000030.1| GENE 1 118 - 1890 2296 590 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0901 NR:ns ## KEGG: CCC13826_0901 # Name: not_defined # Def: fructose-bisphosphate aldolase (EC:4.1.2.13) # Organism: C.concisus # Pathway: not_defined # 1 590 1 588 588 1065 86.0 0 MRKNFFGSIVLAAALASGALIAVPQTASAGVLAHQVKTQGELGSVFINPYDVAPLTAVID RAGKDIKDIHVRVLGKPNGGIDIAYNVSEHALLTHDGVPIWGLYPDYLNEVEVSYVFNGE KKVEKYKIYAQPIVTYSRDYRFSHMQKMKVKKVDPAFKNRLYLINNTITSVYKPLDWKNG GAASWNDFTENFVVDTQGEVRWYLDYQKFYDRSERRVMDGGMMMGFHQLPNGDLSWGMAQ RYMRYDMMGKEVYNRELPRGYIDLSHEVMPLKGDHLLLRVGKYNYHHADGRISHTIRDHI IEVDGSGKVVDEWDLNEIFGKNVYRSNLIKALDARAVCLNIDMDAKEIKISDDLPFGDVT STGTGRNWAHVNSISYDPSDDGIILSLRHQGIVKIGRDKKVKWILASPEGWSADFKEKVL APVDKNGNKIKCENSRCEGDFDWSWTQHTAWLTPRYDNKGSVKHISVFDNGDGRGMEQPA LKEQKYSRAVEYKIDEKKGTVEQTWEFGKERGFDFYSAVTSNVEWQKDKSTYFISSSNVY LLKPDKTIKMVLVEIDPKTNDVKFEMDAESASRDDVAYRALVIDPNIFDY >gi|257441372|gb|ACYG01000030.1| GENE 2 2079 - 2288 340 69 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_2113 NR:ns ## KEGG: CCC13826_2113 # Name: not_defined # Def: hypothetical protein (EC:5.3.2.-) # Organism: C.concisus # Pathway: Benzoate degradation [PATH:cco00362]; Metabolic pathways [PATH:cco01100]; Microbial metabolism in diverse environments [PATH:cco01120] # 1 64 1 64 67 62 53.0 7e-09 MPFVNIKVAAPEPTKEQKKQIIAEITNTLARVLGKDPAAILVMIETLGMDSIGKSGLSLE EIKQNKEKK >gi|257441372|gb|ACYG01000030.1| GENE 3 2662 - 2928 348 88 aa, chain - ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 5 84 22 105 205 65 36.0 3e-11 MALKPVELHKAYRLINHGPTVMASAEFDGVRDVMSASWVCPLDYDKLTAVMGAGSFTRSL FEKSGKFAVQVPFVSQTQLVAKMGKWAR >gi|257441372|gb|ACYG01000030.1| GENE 4 2998 - 3957 991 319 aa, chain - ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 8 319 4 303 310 137 32.0 2e-32 MKNFNQSTKLCEILGISLPIVQAPMNNVTNAALVAAVSNAGGMGVLGPNAGRDAENLNTK ERYKREFERIKALTDKPYGVNIVCRNDNDKKYVLRVMETAFEAGVKAFFFVGIVETELFK FIKDNGGVLVHRALTPSVNSARAAQEEGADIIIATGYDKGGVLPQNKIGTFSIVPIIADT VSVPVMAAGGINDVRGVRAAFALGASGVYVGTRFIASTECPAAQPAKESIVSMGSSELFF VSDYQRVVPSKFAKELNAMYLNGDKEVVAQKIERLNPLRLAMIDGDIENGIIYVNSGISL IKEIKSAKEIVGELMADFV >gi|257441372|gb|ACYG01000030.1| GENE 5 4291 - 4941 338 216 aa, chain - ## HITS:1 COG:RSc2520 KEGG:ns NR:ns ## COG: RSc2520 COG0702 # Protein_GI_number: 17547239 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Ralstonia solanacearum # 1 183 28 218 250 99 34.0 4e-21 MVVGATGAVGREIVRGPCESQNYDKLVVWARRELKFSHEKLEVQIVNFDKIKEIEPRGVD EIFCALGTTMKQAGSRRQFYKVDVSYPVNTAKWGIAAGTRRFVLISAYGADERSRFFYMR AKGKAEKKIGALGYENLQIARLPAIKSERNELRLSELFTIWLFGLLPRGILANYRPMSAQ NRAPPSSPPLKRTARACKFIIQKSLRSSSNLMGLQD >gi|257441372|gb|ACYG01000030.1| GENE 6 5129 - 5602 631 157 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0503 NR:ns ## KEGG: CCV52592_0503 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 149 1 117 122 93 38.0 3e-18 MRGKILTAAFAALLLCGCAAHDAKIGKEADKRSEGAAADCGTSEGVCKVPAVQTPMVGGG TDEYGCLIAAGQSFSKIKNSCVQVFDVADMKLDDPDNTALAIYGIFSADKSRVEIFWASL PQSEILSKVKGGYYVSKDGKISLLKTKSGKGYKIHRK >gi|257441372|gb|ACYG01000030.1| GENE 7 5624 - 7207 1447 527 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1906 NR:ns ## KEGG: CCC13826_1906 # Name: not_defined # Def: flagellar biosynthetic protein FliQ # Organism: C.concisus # Pathway: not_defined # 14 527 1 514 514 779 73.0 0 MKHKILVATFTAALGLQGALASDFDERACAALKGTKIYDTKISEAIWNQSGEIGADKMSA LTGGAKKTLKAAPHCIIHGEIASRTGSDGKHYGIKFELRLSSDWNGKLLFQGGGGLDGFV APALGAVPIRTSSATPALMRGYAVVTTDSGHPTPTPEFGLEQQARLDYAYQAIGKVASVS KQLVFAAYKKAPAHSYFMGCSNGGRSALMAAQRYPLEFDGVIAANPGFRLSRAAIAEQWD NRQLMKIAPKNAAGDKIFANALTQEDLDKLSKAVLDKCDALDGLKDGIIGAWERCKFDPS GLDLPKDKISAIKAIFEGAKNSKGEQIYSGWFYDAGVNQPGWRMWKLGDSQSAEPNARNI VLSKGSMNYYFLTPPQPEFDLMSFDFDKDVERTFETAAINDAISTKLDSFRANGGKLIIV TGVSDPVFSAMNQRDWFKKLVETNANADEFARFFALPGMNHCGGGNGIDDVDPLSALEAW CEQGTAPSSLLGKSTSRAGKQIPICAYPKVAIYVGGDENSASSFECR >gi|257441372|gb|ACYG01000030.1| GENE 8 7327 - 7926 872 199 aa, chain - ## HITS:1 COG:ECs0317 KEGG:ns NR:ns ## COG: ECs0317 COG3477 # Protein_GI_number: 15829571 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Escherichia coli O157:H7 # 8 190 14 196 204 276 69.0 2e-74 MQKTQTHFGLMALLGIPAGIIGAFVKWGGEVPLPPRSPQDMFEAACGAEKLIRSADTIDC SRNFLNPPYVFLRDYIGLSDPNAAIYTFAGHAFNSIMLTHIIFSVCFAVFYCVAAEKFPK ITLFQGVAFGIVVNIAVHCITLPLLGLTPPLFQLPWYEHVSEFFGHAVWFWAIEVFRRDL RNRVTGEPDPADRSGASLF >gi|257441372|gb|ACYG01000030.1| GENE 9 8198 - 9349 951 383 aa, chain - ## HITS:1 COG:CAP0124 KEGG:ns NR:ns ## COG: CAP0124 COG0477 # Protein_GI_number: 15004827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 7 318 15 331 393 155 39.0 1e-37 MRCKKGLLPLIIASGTISAADNWIASLLLPSIADTFGVQVSAASAVLTAYLIPYGLLQPV YGHLSDRYGRGKILISLMLFLAIFTLLCSTAKSLAWLVLFRFCTGCAAAGIIAVCLGVIG DAYDEKDRQKIVAIFLGSVFLGQGLSAALGGWAVARFSWREIFLAFSALSAVSFVSLFTL NFKDAPKSKGESFVKSIASLRGDAALLRSYFLALCNGVIVLGAYSFIGAYLLKKLGLSSN FAGACLMLYGVACFLAGNAARYLKEKLPLKEILSLGFLASASALCLLASCFAATAYVGTF LLGFGYVCAQSVLASAALRCGSAKGLSSGIIGTAIFFGGGIGTAVGGKALEYLSYQGLFC GFAALAAALLIFYRASFKGTREI >gi|257441372|gb|ACYG01000030.1| GENE 10 9911 - 11011 876 366 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 177 4 180 265 197 58.0 3e-50 MRKILTIAGSDSGGGAGIQADIKTISAHKMFAMSAITALTAQNSRGVFGVLDVSPDFVGA QLDAIFSDIFPDAVKIGMISNEGVAEAIAKSLSKHGAKNVVLDPVMVATSGGVLMKQSAL HALKYELAPAAEIITPNVREAEVLAEMKISSLADMRAAAVKISQFFSGAILIKGGDLAGA SGACGAEDADTAQNFKAFGREMGENGALKNSAGLTERANFASENFTSECKNLTANEKPSF EQNLSAASLGAGFEPSREGADLTNFAVDILYENGKFYEFSAPKISTRNTHGTGCTLSSAI ACALAAGLSLPRAVAHAKGFVRRALGWGEQIGHGCGAIDHYFTVQDPFGADFGGSCANEI KIIAPD >gi|257441372|gb|ACYG01000030.1| GENE 11 11185 - 12318 1535 377 aa, chain + ## HITS:1 COG:Cj0367c KEGG:ns NR:ns ## COG: Cj0367c COG0845 # Protein_GI_number: 15791734 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Campylobacter jejuni # 12 354 16 366 367 256 42.0 7e-68 MKKVASLIFAAFLVSGCSYFEKKEESGAKQGGETPALPVGVFIAKSADVPIILKFNGQTV SELEIMLKPQVSGTIEKQLFEPGHSVKKGDVLYEIDRSRYQAAFDSANANLQNASADYKR AKALKASNTISQKDFDTAKAAFMVAEANFKSAKIDLDHSLVTAPFDGMAGDTQKDVGAYV NVGEDLVRLSKFDPIDVEFGIADVDRLELDANLRNGQWKQLGRQVSINLGGKDYNGTLSF IDSVINTNTASVSAKAQIPNPSLEIRPGVFTKVSVDGFYQKNGFKIPQVALKQDLSNTIV YVVQDGKVAKKVVKISAQDTRTATISSGLQDGDQIILDNFKKINVGSKVTPVPASTDPYV AGQPNEQPSQSNAESGK >gi|257441372|gb|ACYG01000030.1| GENE 12 12318 - 15476 3277 1052 aa, chain + ## HITS:1 COG:Cj0366c KEGG:ns NR:ns ## COG: Cj0366c COG0841 # Protein_GI_number: 15791733 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Campylobacter jejuni # 1 1040 1 1037 1040 1177 57.0 0 MFSKFFINRPVFACVVSIIIVIAGVLALKNSSVEEYPQLTPPQIVVSATYSGADAQTIAD VVAAPLENAINGVENMIYMESSASSSGDVRINVYFQIGTNPADAKVNVNNRVTPALTLLP DEVRRYGVTVTERSSTMLEVLAFYDPSEQMDVVEMQNYVAINVVDELKRVSGVGEAQALG TKDYAMRIWVKPELLKKFNVTTAEIIAAISEQNSQYAAGKMGEQPMNLGNPYVYAIKPEG RLKTVEEFENIIIRAQKDGNFLRVKDVAEVKLGGASYNISAKFNGKEMVPVLIFMQSGAN ALAVVEAVNKRIDELKPNFPGELTYDVAYDTTSFVKVSIEEVIHTFIEALILVIIVMYMF LGNLRATIIPTLAAPVSICGAFIGIYAFGFSINLITLFALILAIGIVVDDAIIVIENVER ILHEEPDLSVKEATTKAMGEIVAPVISIVLVLSAVFVPVAFMEGFTGVMQRQFALTLVAS VCFSGFVALTLTPALCALILQKKESEPFFFIRWFNNLFSISTKIYAAGVGMVLRHVLISL VFVGIIIYAMVKLLVLTPSGLVPNEDKGSIMAMTTLPSASTLPRTEADQDFIASIAKKYP NVKDITQITGYDMLAGALRENAGAFFMKLKDWKDRPGDENSNFALAAALNGQLYGADRNS MTYVVTPPPIMGLSLTGGFELYAQSTTGKSYDEIRADMDRVTAKANQHPALKLVRTTLDT DFPQYKLYLDKEKIKMLGVKIADIFTVLNSTIGQYYINDFNLLGRTFKVYIRATQNYRDD PNDLKSLYVRSGSGDLIALNSLVRLERSLGPDSVNRFNAFPAAQIMGEPNTGYTSGQAIA AIQEVIKEELPSGYSIGWAGSAYQEVSETGKGAQAFVFGMIFVFLILAAQYERWLMPLAV LTAVPFSVFGALVFTYFRGLNNDIYFQIGLLLLIGLAAKNAILIVEFAMNEHLNNHRPIA EAAVEAAKMRFRPIVMTSLAFGLGVLPMVIATGAGAASRHALGTGVVGGMLAASTIAIFF VPLFFYLLESFNAWLDRRGKKAQTNEVNDENK >gi|257441372|gb|ACYG01000030.1| GENE 13 15463 - 16920 1046 485 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 11 457 8 459 460 407 45 1e-112 MKINNALLSALTLGILLCGCNFKPVTPQKQTGFKADYASTNVSTQWWKSFNDPQLNALIQ SALEQNSDLQTALNNVEYARVNLGLNKLEYLPNVNLSGSAVRQNNFGNRPDRNSHGSYQI GAVLSYEIDFWGRVRNSVDSAQAKFNATKYDYETAKNTITSTVATTYFTLLALKQQEKIL KDSLKSYQDTQNYRKKQLDAGAVSEIVFYQAKAAVQSAEASLISVQNQLSAAQTSLNILT GKSYDEILRGTAQTAAKMPSAPQIPSGIPSDVILHRPDVASSLENLRSSNFLVGVAKAGY FPTFSLTGSAGYASGEFDRLFTANASTWSIGGSLVGPLLDFGRQKRRVELANLEQNASFI AYDKALKTAFGDVRDALVGVQNAKLRQASLADLVASQSKIYSNASSRYQAGYSDHLEFLD SQRNLLSAQLNKVQADLDVLSATVNAYKALGGGFSIEDSEIKALIGAEKDVQPDMSAFPK DRIFN >gi|257441372|gb|ACYG01000030.1| GENE 14 17733 - 18686 1141 317 aa, chain + ## HITS:1 COG:MT0820 KEGG:ns NR:ns ## COG: MT0820 COG2837 # Protein_GI_number: 15840211 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Mycobacterium tuberculosis CDC1551 # 26 311 20 306 335 249 44.0 5e-66 MSEEKSCACAHVKSQNVTDAPGNNTVFMIWRFGADKTACKKAFEGLCALVINLNKTAVTR FGAASETSCVLGVGFEAWKMLGLPKPLPKELKNFEEIRGDKHAAPATGGDIHIHIRAANQ AVCYDMASEIRAALKDVATCEEEICGFKYYDGRAIIGFVDGTENPQGADRDFFAKVGDED AAYKGGSYLFVQKYIHDMSAWNAAGVAEQERVIGRSKQNDIEMSEEIKPSNSHSAAANVG DDKKVVRDNMPFMQGGETGTYFIAYASTFSTLELMLESMFIGRPRGNYDRLLDFSVAKTG ALFFAPTFDMLQAYGAE >gi|257441372|gb|ACYG01000030.1| GENE 15 18714 - 19328 751 204 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461020|ref|ZP_05626118.1| ## NR: gi|257461020|ref|ZP_05626118.1| hypothetical protein CAMGR0001_0146 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0146 [Campylobacter gracilis RM3268] # 1 204 1 204 204 396 100.0 1e-109 MFCDLSPYQSRRCKEIIENRAENSENISGLLEFINSKFKVRPISAFYGAGRDSARLKIVL RFDKDAAKITDKKCIEHYLVRTPLFEKLNGLKNFYISVESFESQIRTDLIQGAVEELLRN RNELLAPLKIWYIAAVSDAPVVFYFTRQDAARREGGGKIERLIRNFIEKAQDAKYLSHME FKLFFDSKESVDLECGGNLFYYFK >gi|257441372|gb|ACYG01000030.1| GENE 16 19333 - 19653 304 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461021|ref|ZP_05626119.1| ## NR: gi|257461021|ref|ZP_05626119.1| putative TPR domain protein [Campylobacter gracilis RM3268] putative TPR domain protein [Campylobacter gracilis RM3268] # 1 106 15 120 120 182 99.0 1e-44 MQRRENGCEALQKVTQLSRGLEEGGVQSLKAALEGEGDEVSKTQARVILGEYYVMKGEPA QAREYLGPVAQDAERLRDQYDDLLDDEICRADMLLDMIERFGFLAE >gi|257441372|gb|ACYG01000030.1| GENE 17 20204 - 20935 391 243 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461024|ref|ZP_05626122.1| ## NR: gi|257461024|ref|ZP_05626122.1| hypothetical protein CAMGR0001_0150 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0150 [Campylobacter gracilis RM3268] # 1 243 1 243 243 407 100.0 1e-112 MKNFNDEPQKSQKLQQSQSRQNAERRNPPQFGNKPLVVKDYNIAVFFIYNLFFAPLAVPV FLYIGDIFPYYTPFVSVAFAVVSYLNSAHTRFVHLTNRSINYVNKGKITKSIKFDEISLI KLTATPLFGHIVPARNSAGIVLSFIVIGVAFAGFLQSLRGFIIFIMSLTALVLPFFISKL IFSKITEGKFSFRAIDTLIIYDGKGGFISFMMSRADFERVCRYMLKERRISPSKFQKQFV IFQ >gi|257441372|gb|ACYG01000030.1| GENE 18 21229 - 23955 3017 908 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_2212 NR:ns ## KEGG: CCV52592_2212 # Name: not_defined # Def: putative TonB dependent receptor # Organism: C.curvus # Pathway: not_defined # 75 908 32 862 862 996 61.0 0 MIVGFWACKPCKSGAGRNYSASVKGEKSTQNRCGGGLARSLIVAACLCGLSAAQDSSENN ATRSASTKENPGAQSSAATTNSYKFPEIVVVGNIDSSLTSVGDSYGGTQKISRTMIESMP SGNGDFVQLLRTNPNVQFSSTNRQSTTLGEISPANISINGAKYWQNNFMLDGANMNNDLD PARNPGGNPTRFSAFDTMNSVSQGMAIDSDFLRSVEVHDSGVSAKYGGFTGGVVEAKTRD PRAGFHGKFSMQHTEDSWTRYHIYGDEQSFENSATPLNQPRFDKWITRLNLEGTVTEDLG LMFGYTNTRSKIPLKAYDRRYNADTTITERVQRRNIDNYFLKALWYANDRLTITPSVTYA PERNKMFNDHVKDSYADMKSGGLNLALKADYDGDFARFNQILSYSKLESSRDAENEYYRA WQYSNVKNWGSKILSAAAIEGGFGDLDQTQKSLSYNADLEFNEFDLGGSKHRFITGFEFK KQEAKFNVKKEFMTAGGIAPLPAGVNACDPNDELCSIDDSFARRGRSGQFFTRKSYYKGN TKVDMKSLAVYLEDEIKIGDLTLRPGVRLNRDDYMKQTTAAPRFNSYYDIFGDGDSIISF GANRYYGRNLFTYKLREGREGLATTYTRPRNAYTQNWTQLPKDPSLTKFNELKVPYEDEL VFGAKQKLGNFEFFGKYVSRKGRDQIIKSTRRDLGLAPNPNYQNNYQTFTNDGRSENKIL TFGIKTIDDYEAFGTLNGFELGFEHIKMKTNNTLYDISLDRETLEDEKIIEYDGRLMRLS ELPAQDYARPWTASLNIITKIPSYGISVNNFLSFKGSQEAIARTGRTPAGKYPARYDKYE KVNLGKSYSWDARIGYAKKMAGEVEFFTNLDIYNVLNKRNKARLSSDTSLDLVYEAGRQF WLEAGIRW >gi|257441372|gb|ACYG01000030.1| GENE 19 24286 - 27027 2103 913 aa, chain - ## HITS:1 COG:PM0804 KEGG:ns NR:ns ## COG: PM0804 COG0612 # Protein_GI_number: 15602669 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Pasteurella multocida # 1 872 1 877 923 268 25.0 5e-71 MRKILLFLLLCAGAFALEWDGAVLRGALPNGLKYYILENSVPKNSAVFYLVVDAGSIDES PNERGLVHFIEHMSFNGSRDFSKNELIKKLQSLGVKFGADVNAQTGYDSTIYTLSIAVSE ENLKDVFKIFASIADGVEFNPLELVKERGVIIEEARSRDTPIARLYERMDEELYGGSAYF NRAPIGDMAVVKSVSAQRIKELYQKIYQPRSMKFIAVGDFKRDKILKLLKQNFSPLKNTN SYARQDMGIPSRQGLKIYNYDTNETSLNSVKISFWEEFAPPSSEANARKILKSELISSLI STIYERAKASEGALLRVNFSRSNLQFQKTIYSFDVAVLGGDFDGAISQALGLIKGLRDSG FDARDFALAKDALISSRHSAFKRRKSANSAFFAREILHAVKSGAVLPSAVKQRDLEVKLL REISLEELNLEFRRLTDLSEVHASVFSGSGYNLDEAKFKKLQSGAKAVNTHAAHKKLPDS LVSKNLPEGKILSKSLDSQFKFYTYLLENNATVILKPLKTRKDFISFAAVSRGGMSNLAH PGLGSFAAMLSNESGAGEFNNYEISQILSGRQVNYRKNISAFSHGFYGSCGSRDLKWLLE AINLELSSPRVDEKALQNLKIKSLDELARNEKLPGYKFSREFSEFFYGGNARMRPLSAAQ IKALNAEELKKIIYDKFSNAASYTFVLSGDFELKDAEALIKKYLASLPVRGEREDFKDDG IRSLSGRHVFMRNYQNSPRSDVALTAINRSAPHSLENTIKISALASVLQEALRERIREDE GRTYGFSVASSLSRIPYEHSSLHISFSCAPQNTDQILSAIREIFAEIAGGGSDVARHLEN FKKSQIITARTARESPEFWNDALVKYALWNEEIADFKTFEKIINSISPKDIAEAAQTYIF DTDETVRINAPKF >gi|257441372|gb|ACYG01000030.1| GENE 20 27907 - 28062 124 51 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_2099 NR:ns ## KEGG: CCV52592_2099 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 51 1 51 51 63 62.0 3e-09 MRYILAALLALMAFSGCSNTWHGVKEDSRNAAQWTKEKVHNGAEWVGEKTE >gi|257441372|gb|ACYG01000030.1| GENE 21 29030 - 29395 487 121 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1678 NR:ns ## KEGG: CCC13826_1678 # Name: not_defined # Def: putative aminotransferase # Organism: C.concisus # Pathway: not_defined # 11 110 3 103 112 110 55.0 2e-23 MSVEEDGAAFIDEDYVNIVPQDLLERGIRLREEYGIYDIAWKFDDVMEVLKITRGKGMII LGGDVYRLNGNEPIITYDNWYTEEEDDNAFELAIEYITKYRARNGDDFAYCPTICPGRVP K >gi|257441372|gb|ACYG01000030.1| GENE 22 29519 - 29908 253 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461031|ref|ZP_05626129.1| ## NR: gi|257461031|ref|ZP_05626129.1| hypothetical protein CAMGR0001_0162 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0162 [Campylobacter gracilis RM3268] # 1 129 1 129 129 231 100.0 1e-59 MKDNEVVLILSIESDRDLSETISSSGISTTKTWHKGDLKIKGSILKYKNFGFSIEEKFYD IPSAGDLIKKFLADINVARSIKLQSVKKLLRVVIYSNCSLPGLYYDTDLLRLLAGNNINL DNDVYFLDE >gi|257441372|gb|ACYG01000030.1| GENE 23 29901 - 30422 472 173 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1690 NR:ns ## KEGG: CCC13826_1690 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 6 165 11 173 176 120 46.0 3e-26 MNKFELHTKIKELKVRLKLQKPEIITNPVQKDKFVEQDLCSKDLCDLDHSTIKLLSGDLQ VFNDYSFRYYILDFIDFYERFGDEAIIEDMFIQAFAPPMRRARAKQFSRDEVKIIIDFLQ KHYENITRITHTKKYKKLKLYEQDEIYIPFKHFEKEMKNAIKFWEKYYKGKNL >gi|257441372|gb|ACYG01000030.1| GENE 24 30467 - 30856 491 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461033|ref|ZP_05626131.1| ## NR: gi|257461033|ref|ZP_05626131.1| hypothetical protein CAMGR0001_0164 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0164 [Campylobacter gracilis RM3268] # 1 129 1 129 129 223 100.0 3e-57 MCLIKTDLGKYEEYIYFFIEKNRAYFSAYQEQIFPFDMEYIPSLLWLLASFAETTIKIFD DLDEKTRNEIFDFVEKGAASEDEYIGTAFCTGFVETIVNIAKEDEYKIVSKYFRNETQEY AAAWMKFGE >gi|257441372|gb|ACYG01000030.1| GENE 25 30905 - 31279 332 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461034|ref|ZP_05626132.1| ## NR: gi|257461034|ref|ZP_05626132.1| coproporphyrinogen III oxidase [Campylobacter gracilis RM3268] coproporphyrinogen III oxidase [Campylobacter gracilis RM3268] # 1 124 1 124 124 230 100.0 3e-59 MPKHEFLLKKTKENIFSKGHSVVISDDLILHISHSLEWVQTTWNDEENLKKGLNYYGYSW IEDKAKFRDIICTWRSLFLSADEQIVFDKNCALNKSSVIEQLDSLLELIDSAIKNDLYIL HLGI >gi|257441372|gb|ACYG01000030.1| GENE 26 31320 - 32072 417 250 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461035|ref|ZP_05626133.1| ## NR: gi|257461035|ref|ZP_05626133.1| hypothetical protein CAMGR0001_0166 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0166 [Campylobacter gracilis RM3268] # 1 237 1 237 250 466 100.0 1e-130 MKRNYKKIIPVRGRRKFSINNFRKIFAEGDILQIGQRRFLFCSWNNLLRINGDNSGKFIV LPPEANAKNNNGLISKKWILENLDFVCDTESPRNISIFSYYDSFLAEYKRINDKIPAKFT YKFLEFKDDLKNGDIIECHKAFRPYDRKIKFIVATDTKGCPRLPYLEGFYSGMFAPIGYS DKMHSNKGREYAISSSWLIKNWEAAFVGNCDIRHTYVNLQNRKEILNFTDKQLENFVKKK RKKLKFKWKK >gi|257441372|gb|ACYG01000030.1| GENE 27 32086 - 32712 517 208 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461036|ref|ZP_05626134.1| ## NR: gi|257461036|ref|ZP_05626134.1| hypothetical protein CAMGR0001_0167 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0167 [Campylobacter gracilis RM3268] # 1 208 1 208 208 405 100.0 1e-112 MIVKCIKEDRHEHLRLNRTYFVHGIQYEEGRIYYWILPFEDDIDYNRFNSEYFQVIDETV PTNWKFGMHKGFFGCFTASYEEAATDEDHYGRLIDGDPIEKKIFKKRRAEMIDDVYNTHI IKDFNRFIHDLSSNLSIQMNIANKVLDIEISDANAEAKHHKMNILKDDGYSWYLIESDAS TFKANFTNDYLRPVLKYLKLWLGRKNFR >gi|257441372|gb|ACYG01000030.1| GENE 28 32732 - 32953 230 73 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1947 NR:ns ## KEGG: CCC13826_1947 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 9 72 5 67 69 72 60.0 6e-12 MASASDKEIFIKILNEDIDVWRPVKAAQIAQYIFKITDTTNFESELDEILEFKQGDIVKC REKDGDFYAFELL >gi|257441372|gb|ACYG01000030.1| GENE 29 33051 - 33965 956 304 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1734 NR:ns ## KEGG: CHAB381_1734 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 48 290 52 291 295 77 28.0 7e-13 MSLVSYELKKQKLDGTCNVALWKARGGVAAVVLALFIAMRKDFGDFSFLFLLVLLALAYP AYKYLAVRISRKFEALSEEAFKNEFLLWIAKELRLTFQPFGAFLLDEIYKNPLRKEANLC TCKHAIVGKTPEFGIKIGDICLSRDFDKNRENRVFELDKILHLKKKDDTAIFDGLFAKFD FSETFDSKILVVPRGEFIFGASDLKLLKDSPHLSASFDVYLNNSAAAAFLQNKKILENMQ TITVNLFGKTELYLGENSLVIGVENSEIFKSAPSSQSAKLLESLNKMIEIAKIFAYLKKL GQVE >gi|257441372|gb|ACYG01000030.1| GENE 30 34174 - 36546 2929 790 aa, chain - ## HITS:1 COG:Cj0024 KEGG:ns NR:ns ## COG: Cj0024 COG0209 # Protein_GI_number: 15791423 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Campylobacter jejuni # 1 790 1 789 789 1298 78.0 0 MKVIKRNGRTEELDVSKIKKYTSEAVEGLENVSLSELEVDAKIQFRDMITTEEIQQTLIK TAVEKIDVDRPNWTFVAARLFLYDLYHKVTGFSGYNSLEDYFARGEAAGRIMLGLKEKYD LEDLNSYLQPQRDLQFNYLGIKTLYDRYLIKDKSGAPIELPQQMFMAIAMFLAQNELDCQ SWAKKFYDLISKFEVMLATPTLSNARTTRHQLSSCYVGSTPDNIEGIFDSYKEMALLSKF GGGIGWDWCKVRAMGGSIDGHKNAAGGIIPFLKITNDIAVAVDQLGTRKGAIAVYIEPWH MDVSDFLDLRKNSGEERRRAHEIFPALWINDLFMKRLQSGGKWTLFDPAEVSDLSDLYGA EFEARYEQYEADDKISKSTILAKELWKKILTSYFETGMPFLCFKDNANRINPNAHQGLIR SSNLCTEIFQNTAPNHYKIKVVFADGSERLFEENEDVRTDAGIVKKAKKITALDTLGGKE IFIVEKGCSEGATAVCNLASVNLSKINSREEIARVMPIAVRMLDNVIDLNFYPHAKVKHT NLKTRAIGLGVMGEAQMLAERGVKWGSYEHFELIDRIMENVSFNAIKASSNLAVEKGRYP DFAGSKWSEGIFPIDLANENAKALVKRGGLFEQSSCDWDGLREKVKRDGMRNGYLMAIAP TSSISILVGTTQTIEPVYKRKWFEHNLSGMIPVVVPNLSPKTWQAYVPAYELDQRLLVKA GAIRQKWIDQGQSLNIFMSLDKASGGYLSEIYTLAWQLGLKSTYYLRSESPDSEKLNNVA DRSIECEGCQ >gi|257441372|gb|ACYG01000030.1| GENE 31 36930 - 38378 1700 482 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0359 NR:ns ## KEGG: CHAB381_0359 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 53 475 1 423 541 88 23.0 6e-16 MKKIIAALVVIVALIVGVFVATKDAKTGVAKSVNDSITKTVDGAVGKSASAAIEQQIAEF IARNEIFETKSAKFYPGDSNSSGFIEGVVKKEKLQKSLAEGFSKLKEKAGAQDSNDTDEP DPAKIFPEDFAFRYDYTIKHSVKNAADGFESDGILTIKTPYYAEPCKKLFKTDAPLSTHL NYGPTEVKFSAKLADINVLEDGGMGRLAGLSLNGTSDMSGKTIKALGFKIGEIFIDDGKD SGLDIKDLIYEANFKNGIQDLDDNITKLFLNDIDFAGSTKELVVTVDKQRFVVVTDMSTE GSYRVKDGILNFNESDKAQSLKIADVLVRNIHLGVDTSFSAALFEKYLSVVSNPQEGEKL AENKELFMKLLKDDMKINVNDFSFENSLGKKFAFNASALVGGYIDETQLFKRMSLDGKAT INTTITDFLSPYDSLRDFAPMAEVYGSQFLKPDGDGVKMEFSFDKASNSMILNGKPIPLP HN >gi|257441372|gb|ACYG01000030.1| GENE 32 38517 - 40148 2135 543 aa, chain + ## HITS:1 COG:Cj0027 KEGG:ns NR:ns ## COG: Cj0027 COG0504 # Protein_GI_number: 15791426 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Campylobacter jejuni # 3 539 2 538 543 887 80.0 0 MAKQTKYIFVTGGVLSSLGKGIAAASIATLLKHAGLKVRILKADPYINVDPGTMSPLEHG EVFVTDDGAETDLDLGHYERFLDENLSQDNNFTTGKVYSSVIEKERRGDYLGKTIQVIPH IVGEIVRRIKKAGEGNDVLIVEIGGTVGDIEGLPFLEAIRAMRVELGRVNTMNIHLTLVP FIKVAGELKTKPTQHSVGELRRIGISPDMIICRSEMPLNRALKDKIALSCGVDKNCVIES PDSASIYQIPLAFLKQDILTPIAETLSLNKLEVDMSNWDSLVKRVIVPTNETTIAFVGKY IDLKESYKSLTEGIIHAGATLDTRISLKWVDSEKIEASNVDEIFRDVNGILVAGGFGSRG VEGKILAINYARMHKVPFLGICLGMQLAMVEFARNVLKLKNANSSEFDPQTEDPVIYLID SFIDASGKKQIRTHKSPMGGTMRLGGYDCDVKKGSLLGKIYGEQKTIRERHRHRYEANPK YRAEFEKHGLIVCGESDGLIEAVELKNHPFFLGVQFHPEFTSRLVRPNPAILGFIEASIK NAR >gi|257441372|gb|ACYG01000030.1| GENE 33 40138 - 41718 1830 526 aa, chain + ## HITS:1 COG:Cj0028 KEGG:ns NR:ns ## COG: Cj0028 COG0608 # Protein_GI_number: 15791427 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Campylobacter jejuni # 1 521 3 522 523 613 56.0 1e-175 MLGKNEIREILKSRFANDRHTKISEIPLPCDLKDTYKAALRIKTAIEENQRIAVVGDYDV DGIVSTVIMSDFFNQIGAEYVIKIPNRFTDGYGLNSEIIGELEDVDLIITVDNGTSATEA AEICAQKGIDLIITDHHMPPPVLPRAYAIINPKQPDCTFPNIEICGAQVAWYLVGALKET LGVNYDMASSMDILIIAIIADMMELRDMNRALLRFGIKRLNSSNRACFKAIKEHYFKKHF EFDDISYTIAPLINCTGRMDDATMSYNFLCAKNIREANHYLETINSINNSRKEEEKSLYD EIVKSVDPNDNVIVVWGPQWHEGIIGIVASRLSKTYKKPAIVFSVSDSRAKGSARSIGKF DILELISSQSEILTTFGGHKGAAGVGIDPALLQEFKRRVNERITPKDLSDFSAQDDLLGE LDASQIDFELLEILEFYEPYGQKNPRPLFCIKGARARNIREIGKEGKHIKMALDKNGGSV EALFFNYDFLPRAGERVDVIFTISKNNFRGTITPELIIKELAPSES >gi|257441372|gb|ACYG01000030.1| GENE 34 42191 - 42520 451 109 aa, chain - ## HITS:1 COG:SPy1581 KEGG:ns NR:ns ## COG: SPy1581 COG1917 # Protein_GI_number: 15675470 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Streptococcus pyogenes M1 GAS # 1 108 1 108 112 99 46.0 1e-21 MQHIKNIDAAKAVELASLVEVAPHKVISRTLAQNPALNMTLFAFDGGEEISSHKSDGDAF VYVLEGEGDFTIDGQKHRVKAGQSIVMPAGLPHAISAPAPFKWFLVVVF >gi|257441372|gb|ACYG01000030.1| GENE 35 42587 - 45148 1250 853 aa, chain - ## HITS:1 COG:NMA0732 KEGG:ns NR:ns ## COG: NMA0732 COG3213 # Protein_GI_number: 15793708 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in response to NO # Organism: Neisseria meningitidis Z2491 # 493 853 1 357 357 264 41.0 5e-70 MNRNFIFSAREQGGSARNLNLRCGLCASKRSFGAHRDPGAGRHSLSQDTGRCDFITPKYE LRSRANCDYSVSVLLNGAGRCDFAARNSAKFSGDAYCGSSASTYLRRVDAKQGVHLYYKF GANRDAFPRCSFDACGLSAYRSLFCDASGLGSEQNPALGTFCAVRNFLILHDACNFKNFG SVNLKKFNLAASQFVNLKKQIRAGEGADKSANPRNLTGFGREAPTPRRLGFESKILAPRS SYFESEAGTLCRPSLWHRHRGCEAARNFRRSAPDFTENFKNFARSLETEPAQNFKIFALN FIRNFWNFARGREAGSMQGFGNSGRNFEPKFPQSAKNSDRNLEADPAQSFKNQNLAQDFS QNGKSYDQNSTQGFSQSGRNYEPNSKPSFLQNIKNSERNFPLSFLQSAKNSDQSQNFKSA RAQSHAEPSSVQTFSQSSKNSDQDSKVNSTQNQTEPVSSQELKNSEPCPAQRLGFYAPKF KGERARNFFSHPMRAFVLCACFFAALGALSFLAPDALAIDYVAAHKFYFLFLAPSCIYAA FLLTALPDWTNFEGSLKPVSLAFAACLIAAFIASFLNLRLAAAITALFWAVFFIFAAWLL WLDKNSNNFSILAVLAAFCACSAAYGASENEKFLLSFVHINVAAIAVVSYRISVVIGNEA LREAGLKDAVFIPNFIYKNLAAFLAFALALATPFLSEPACGFIALGIGFLFLAKLRELHY VEILSRHYMAFYYALQAACAAGYAWLGWELIRGGYAAAPLHVIAICYIYGAILFVGMIAG QRHSGISPLNFPRLSRAALVLALSAGTLRAVFAGESFVLYVMIPSALFIAAVALYLINFI PIFLKNPFSADPD >gi|257441372|gb|ACYG01000030.1| GENE 36 45141 - 45830 909 229 aa, chain - ## HITS:1 COG:AGl926 KEGG:ns NR:ns ## COG: AGl926 COG4525 # Protein_GI_number: 15890579 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 189 12 206 255 117 35.0 2e-26 MLKISNLRYEILRDVIISDFSLQLRAGEVKTLFGPSGCGKTSLLRLVCGLEDKKSGQIEN GFKKISFLFQENRLLPNLTALKNIEIFSPAGVSEIYALAAKIGLSPSDLNKFPRELSGGM QKRTAFLRTILSGCDLALLDEPFVGLDRDLRGVLIEILVSKIEHEGLACLLVTHDRFEAA RLSHEIIELEPKGMGLRRIVSLDEPLSARDEQYEERVVSEQFRGVSYYE >gi|257441372|gb|ACYG01000030.1| GENE 37 45830 - 46627 816 265 aa, chain - ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 263 14 258 269 137 35.0 2e-32 MLKIDKIRKAQNPVFYVIDYLWGGFASLGAVCFFIAVWQVASEAYGPLILPEPAAVFSKA CEILKNFAANDLVLSLKRALAGTFLALFAGICSGLAAGYFKSLRAFLNPLITVLLSTPPI VWIVLAIFWFHFGDTSVLFTVVIVVAPMTFASAAQAMASVSAEYTELFDSYKSSFFKKLR YLYAPHLIERLLPAIYVAVSNGAKVLVMAELLGANDGIGAKIAEARVNIDTVEVMAYVCL AIAFTALFDYLVTKPLQILLMPWSR >gi|257441372|gb|ACYG01000030.1| GENE 38 46621 - 47580 1024 319 aa, chain - ## HITS:1 COG:AGl928 KEGG:ns NR:ns ## COG: AGl928 COG0715 # Protein_GI_number: 15890581 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 318 6 326 327 164 36.0 3e-40 MQRRNFLKLTSALAASGLASPLFAKEAFTIYGAPAMPSLIIGVACMQGQIGKKYDAKLEL WRDPDQLRAGVASGEYKVMMSPSNVGVNLANQGRKIGMVNILTEGLNFVMSKGEKITEFA QLKGKKIVMPFKNDMLDIIVRAIAKKQGIGGLNIDYTASPAESAQLFLAKDYDVAITVEP LASAMILKGKVSGIAVQRGANLSDMWAQAFSVKPIIPQAGIIADTDFYAARKADFEILNA DLADALAWIKANKQSAAAIGTNFFPTPPPAIFMSIDMSNLCVKKPSEIKDELLKFYEILM EFNPKLIGGAMPKDEFFLC >gi|257441372|gb|ACYG01000030.1| GENE 39 47955 - 50426 2122 823 aa, chain + ## HITS:1 COG:jhp1284 KEGG:ns NR:ns ## COG: jhp1284 COG2189 # Protein_GI_number: 15612349 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Helicobacter pylori J99 # 114 784 1 621 649 305 33.0 3e-82 MDYKKAFYSKLEDCYLGAKIKDTKDKSGFGNLLSIKERYFEHIKQILDKRIPSTDDFDEH EIYNKLYTFFDSYLNETGTPFFTDTPIYKNIYAKIYSNSKDTSLFYKTQNLYYVKSDVIY KSMTLSDENAKFAVEFNADEFRRSIDNVKSKLIFKFAGLDQGANSQAQTSLIKINVTNQS ELFKDLKSVFKQGSGEFTDDFLKEIKLLKIDEDELKKVFRSYKKQNEVDFFIHKDAENFL KEQFELWMFSHLYGDSETHKWQSYAIERLQKIRNIAFELIEIIAKFENELKAIWLKPKFA KNTQYVFTLDLIPNFDVSLVTDKQIAEWKELNLVDVNFTTDTLKTEFEKFKFLPLDTKFL SNKNRLDLLSRFENLDEILNGELVKSDNFAALNTLMPRYKGKIDLIYIDPPFNTGSDFEY KDRFQDATWLTLMQNRLELAREILSDRGSFYLHLDENADFLGRMLLDEIFNFDECKKITF NTNATKDEEADLFGYKSFGNNFALKSSTIFFIKNGNSIFNKLWKPNRNISQLNLGQLDLI AVAKTNCPKKIKDYNFLIEQYENDKLKLQSVDISNEKIYPVGDIWNDIYSFTQSEMRVSE NISFYSSQKPEHMIRRIIQASSNQNNLVLDFFTGSGTTCSVAHKLKRRWIGIEMGNHFYE KYLSFNKESKTFEYRLGLLGRMKNVLAGDKSFFAMNKSRRSSLSNIIGYKGGGAFRYYEL ESYEEALNECEYALDENGVIDYRRSRKLIKKLNKGEKVCLDMVGYRGEFDIFLSYSNLTG AKIKRIFARDDVECAEFENGEIMQKDDIDMAKFPKIRDLIWWE >gi|257441372|gb|ACYG01000030.1| GENE 40 50433 - 53258 1701 941 aa, chain + ## HITS:1 COG:no KEGG:C8J_0265 NR:ns ## KEGG: C8J_0265 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_81116 # Pathway: not_defined # 8 936 12 947 947 702 48.0 0 MKILTDKLILAEILKERNLSAEADALNLSDFSKFKLTDYQQSAVKSALKILEFYYASHQI RGSDSANLHSSNNQSKFSEREILLKNYRKFGANLNTHEINRASFWMATGSGKTIVMIKLI WAISRLIKFDILPKKPILLLAPTEQILSQFKERINEFNRYQNEQIYARDLKDFESANSGL NLYDTTLFIARSDLLESTENTSKKDAGKRLNYANFKNENGWYILLDEAHKGDSTDSVRKG YINELASGKKDEFPRGFILNFSATFTDGIDLKTCAFNYNLQKFNDQGYGKNIAIFENKLN LDDLEQILQSFIIFTSIKISNRRISRRLSDALYHAPLIIAVSDKVNTQDAGIKRYFEAIC KVLTNDVDIPKIVENLVQILNQLEFVFGGEKIGDEFIKIVKNVDAKTMREELFYSQGISS LEACIIKGNDKEVAFKSKNAGKPFMLLNIGDTKGWKKEYLNELGVQSEIDVDSGFFAHIN ERNSPINIMLGSKVFSEGWDSNRVNLISFINIGSRSAKKYVTQTIGRGVRIEPFKNERRR LQYTSNFAALEFDEKERLKELASGPETLFVFASDPKAIEAILSELEQFKTGEILKGFKKS QTIKPLLLPQYEDEACESKPYVISRPDYKNLNKFINSYDLDVLLLSSELKSPDLGLSTIN KTLKKDEKFIKISGATEKFQNPKFTLCEIDKFHKFKNKKLKGFKEVENEISHFTKFSTTF DKDEISKINEAILNLLKSKSEDELIDELESKKITSREFANLIKQNKKDCKILGFKLDANL ARHYYNPLVIDADNKAQIVYAISEKSEIEFLEDLKTGLNALDGFEWNFCKIVQNVDEIYV PYFDEEEQIWRKFYPDFIFWLKQDEIYEIVFVDPKGLKHGEGARFKANGFEMIFGSKNLE FNDNKIIVKLAYYNKDPHIPQGLEKYVFSSINEIFKTERKI >gi|257441372|gb|ACYG01000030.1| GENE 41 53309 - 54982 2347 557 aa, chain + ## HITS:1 COG:Cj0013 KEGG:ns NR:ns ## COG: Cj0013 COG0129 # Protein_GI_number: 15791412 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Campylobacter jejuni # 1 556 1 556 558 858 76.0 0 MRSDIIKKGYTRAPHRSLLRATGLKDEDFEKPFIGVANSFIEIIPGHFFLNKYSEILKDE IRKNGCVPFEFNCIGVDDGIAMGHSGMLYSLPSRELIANSIETVMNAHALDALVCMPNCD KIVPGMVMGALRVNVPTVFVSGGPMKKGYTKKGEPIDLSTAFEAVGKFETKEISAEELKE IECAACPSGGSCSGMFTANSMNTLCEAMGIALKGNGTVPALTPEREELIRKAGRRICQIA LDEKYKIRNIVNEKSIQNALVVDMAMGGSSNTVLHILAIAREAGVNLQIAGLNEISRKIA HIAKISPSLPNIHMEDIDRAGGLSAVINEISRRDNGLLGLDALTVSGESLGERVGASAIK DESIIRKVENAYSQVGGLAILFGNLAEQGCVIKTAGIIGERKFSGKAVCFNSQDEAIEGI SNGKVNKGDVVVIRYEGPRGGPGMQEMLSPTSLIMGRGLGADVALITDGRFSGATRGLSV GHVSPEAAEGGMIGLLQDGDIIDIDVDMYAINVRLSEEEIAARRAKFKPIEKPLPFRWLR MYRKLVTNASNGAILEA >gi|257441372|gb|ACYG01000030.1| GENE 42 55038 - 56621 695 527 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461055|ref|ZP_05626153.1| ## NR: gi|257461055|ref|ZP_05626153.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 527 1 527 527 945 100.0 0 MFEGNFTYKDLKLVDDEIDALSNFKNLNKQWCHAHNINKIIDKFKHKISIGWGIECIENL LTKCIKYENKIDKIRSYVKDIMDNKYNLLSEESKKDIDEIYISLTYLKENGINSISIYTI KKLSTDYEKILRILKTQKEIAKKSIKTIDIEDKKKLYTKFLKNESEIYRIYNNLPDKFIK DKKTYISHVSNSMLSDAKEIIAKGIKYKIFSVLNFVVFGALLCIPYFLELRRVPEISIGS IPISLVAVFAIAVFLTLYFCILVFLQNYFLFRCWYESKNKIKYCFIGVDFVAILLMALFP LIYYILNLSYSSHRCLNDIGCLFGRCLGLHAILLVYFFCKFWWDNKDELSNIFLAAFLIF ISDLLILIAIYFNYADEYILIVVSMAILSFLIRLLQISRQFAYRVLLFVLSFMALVFLLF ASNSGFFVRVVGLANYQTDFDIKKENIPEYVNLENINKCKNTQDKDINFIKYTCISDEMP SSTVKFKNILVKVKSDGRYWLEVVAKDQNKSKINDYRFWISEKNIIN >gi|257441372|gb|ACYG01000030.1| GENE 43 56661 - 56837 86 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461056|ref|ZP_05626154.1| ## NR: gi|257461056|ref|ZP_05626154.1| biotin carboxyl carrier protein [Campylobacter gracilis RM3268] biotin carboxyl carrier protein [Campylobacter gracilis RM3268] # 1 58 1 58 58 94 100.0 3e-18 MTSFAIKIVGIKGETLDEIVNLAYDYAVNWRKDKLYTKENIKAIFEIANDKFEDIVKI >gi|257441372|gb|ACYG01000030.1| GENE 44 57086 - 58351 1709 421 aa, chain - ## HITS:1 COG:aq_940 KEGG:ns NR:ns ## COG: aq_940 COG0065 # Protein_GI_number: 15606262 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Aquifex aeolicus # 1 421 1 423 432 460 53.0 1e-129 MKQTITEKIFSEHVGKAVFAGQIIESTIDMVIGNDITTPISIKQFELSGAKKLANPDGFA IVMDHYIPTKDILSANQAKISREFAYKHDLKNYFDEKDMGIEHALMPEKGLVVPGDVIIG ADSHTCTHGALGAFATGMGSTDLAFAMITGKNWFKVPPTIKVIFHGKPAPHIYGKDLILE VIRLIGVDGARYKALEFCGDALEYLDMDSRFSLCNMAIEAGGKSGIVAVDEITKEFLADK NLRAEPKFHYSDEGANYEQILQIDVSKLDPVIAYPFLPSNGKSVREAVRDDIAVDQVFIG SCTNGRLSDLRIAAQILKGRKVARKTRLIITPATQKIALAAQKEGLWDIFVEAGAVVSNP TCGACLGGYMGILGVGERCVSTTNRNFVGRMGDRTSEVYLANSAVAAASAVAGKIADPRD L >gi|257441372|gb|ACYG01000030.1| GENE 45 58449 - 58973 546 174 aa, chain + ## HITS:1 COG:CAC3555 KEGG:ns NR:ns ## COG: CAC3555 COG0778 # Protein_GI_number: 15896791 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 3 174 1 172 174 134 36.0 7e-32 MEILDIFANRRSVRKYTDTPLEDEALDKILKAGLLAPSGHARRPWEFILVRDKRMLERLS ACRSSGANMLKQAAAAIVVIADEQKQDVWIEDCSVALGYMHLAASALNLGSCWVQARLRA AADGRSCEEFLREALGFPPNFKAEAILALGVPQQRPSPHDLQKLNLSKIHKEKF >gi|257441372|gb|ACYG01000030.1| GENE 46 58979 - 60301 984 440 aa, chain + ## HITS:1 COG:Cj1349c KEGG:ns NR:ns ## COG: Cj1349c COG1293 # Protein_GI_number: 15792672 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Campylobacter jejuni # 1 439 1 434 435 308 42.0 1e-83 MKYQNLIQICEYLCAKRFLSHIKRVGDNLFKVCFDGNETLFFDMNKSGCNIHENDAFTEG KVYAAPFDVLLAKRFVKSRITSVSVPENNRILCLSVSQNASYKTQSSNIYFEFTGRFTNV IITDENDVILEALRHFETEFRQIKVGRKLRHLPPANIKEAPVPKISDFRAFFRAEFNALN ADRLNSLKSAKITALNKKLDSVREALGSLQSSAELLRSAELLGAKAALLKENIYKIPTSA REFTLQKEDAEAVEFKLQKPASATLGELYSEAKRLRQKAANIHIEEQNLKEKLAFYENLK SLVLAAQDAHEIEILMPKRTQTRQKSKEKNSEYVANFYLGDFKISVGKNEKGNELLLKNS SKSDHWFHLKDIPSAHVIVKTNKQSLSEEVIEFAAKICVSFSASGSGKYLVDYTKRQNVK INEGAFVNYVNFKTISVLKP >gi|257441372|gb|ACYG01000030.1| GENE 47 60351 - 61115 924 254 aa, chain + ## HITS:1 COG:jhp0201 KEGG:ns NR:ns ## COG: jhp0201 COG0575 # Protein_GI_number: 15611271 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Helicobacter pylori J99 # 2 251 9 250 266 142 38.0 5e-34 MKQRIITASILLAVFLALILINARWLNFAVFALILVLAFFESLKLWGLEETSKKWLALAI AFFALLPFTQTDEPFVSALKVSILMILCVASVVAFTKGPSLKITLPFIYPVAPIFFMWAA YDDFGEVFHFVWLIFIIVASDSGAYFIGRAFGKTPLSASSPNKTVEGVLGGLALALIVSL IYARIFTNMPPLEILGKTIIIAIFGVFGDLFESYLKRAAGLKDSGALFPGHGGILDRIDG YMFGAIAMAIVYSW >gi|257441372|gb|ACYG01000030.1| GENE 48 61109 - 62194 1212 361 aa, chain + ## HITS:1 COG:Cj1346c KEGG:ns NR:ns ## COG: Cj1346c COG0743 # Protein_GI_number: 15792669 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Campylobacter jejuni # 1 355 1 353 356 358 50.0 1e-98 MVVLGSTGSIGTNTLDVAARSGSMIEALSCGRNIKLLNEQIAKFHPKLVCIADAQQKSEV DHERVFCGADGILQMLAECKSTTVVNALVGFAGMMPSLKTQELGKRLCLANKESLVVGGK FLQTDKIYPIDSEHFGLKFLLSNAKTPVSRLIITASGGAFYDVPLTQLGSLTPQNALKHP NWKMGAKITIDSATMANKLFEVIEAFWLYGTREIDALIERTSQIHALVEFADGSTTAHIS RADMRLAIAHAMFSGDVREQIAAPVDLCSLRPIEFKPIDEMKFQIFTLKDALLANPDLGI VINAANEAGVNAFLQQRCRFTDIARVVLKCAEKFNSPSVTDADALVAVDASVRAYANELL K >gi|257441372|gb|ACYG01000030.1| GENE 49 62384 - 63358 676 324 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1736 NR:ns ## KEGG: CHAB381_1736 # Name: not_defined # Def: putative galanin # Organism: C.hominis_BAA-381 # Pathway: not_defined # 6 324 4 315 315 161 35.0 3e-38 MDIKTVIDLEKQRKQLKKSRKFWKILSYLVAFAVFGPMLALALIIIFLDFPKLDLGVESL FLLAASILAIIGMRDEFYEWIFERKTERFLMRYKELYLKPYIESLGFSYKMGALFQEKEV RASEIFDGFDRFRADDLVCANVDGVDFMFCDIRLEKDVGTGIPFIFKNNYATSFEGPFFV ANFNKKVRSDVFVFSDVAAPAGIDLPPSGLPRGLWSNRKIPIDNADFNANFSVYASDTVA AMYILTPALMEKILSLKQLVKSNISLSFKQNKIYIAIARGADSFEPSLDQPILNARIAKD IKADLDAMLQIVKILKLNEKIWTS >gi|257441372|gb|ACYG01000030.1| GENE 50 64063 - 64332 237 89 aa, chain + ## HITS:1 COG:no KEGG:Caci_3518 NR:ns ## KEGG: Caci_3518 # Name: not_defined # Def: hypothetical protein # Organism: C.acidiphila # Pathway: not_defined # 10 89 12 91 92 73 46.0 2e-12 MGQYVIKTLDYCAEKGLRLQWEKDFAISVNTLENEVTIRANKSGLISLARHLLTLAQDSA PKHSHIHLDEYNSLEEGSAELINQKDTER >gi|257441372|gb|ACYG01000030.1| GENE 51 64364 - 64684 334 106 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1688 NR:ns ## KEGG: CCC13826_1688 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 106 1 106 106 145 69.0 4e-34 MREKHIVELLSSAIEGDGIISVVFKFFHIDWGYTLEELDLIINFGIKNGDLLIEDMHDEN KHYDKIDWRLDNVYQEIVVVDIYKYMPLLFSKHPTVPDPYKQFITE >gi|257441372|gb|ACYG01000030.1| GENE 52 64790 - 65194 249 134 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1940 NR:ns ## KEGG: CCC13826_1940 # Name: not_defined # Def: NADP-dependent malic enzyme (NADP-me) (EC:1.1.1.40) # Organism: C.concisus # Pathway: not_defined # 1 133 1 131 131 99 41.0 4e-20 MLDRIASFLTGIMCFLYLINFTVHKHVKIGEKYIKFDDAGILWALPATVFLIAGICFFYL AFRSEKSIKRYPEYMWCADCSKFYRYEDVKDTDQICPDCGKKLTEYNDGDYWKRNAPHQG AKTPKIKKRKFKKR >gi|257441372|gb|ACYG01000030.1| GENE 53 65227 - 65655 291 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461067|ref|ZP_05626165.1| ## NR: gi|257461067|ref|ZP_05626165.1| putative adenylate kinase [Campylobacter gracilis RM3268] putative adenylate kinase [Campylobacter gracilis RM3268] # 1 142 1 142 142 272 100.0 5e-72 MLNRIFALIGFFAFFAWGLTAALLEKVDIKPGFMASVKLESTYLRIIIGILCFATCAFFL YLAFRPEKSVKYYPKFIRCKGCLKFYNFSDVKDRSVCPKCGGELQDYAEIEKWNQIEKNK KLERYYKFEKEWLKKVSHDKNN >gi|257441372|gb|ACYG01000030.1| GENE 54 66016 - 68088 2266 690 aa, chain + ## HITS:1 COG:Cj1614 KEGG:ns NR:ns ## COG: Cj1614 COG1629 # Protein_GI_number: 15792919 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Campylobacter jejuni # 55 690 29 709 709 361 34.0 2e-99 MFKKFYLSNAAIALSLCAALQLNGAENNATSANISAPSAGAVNSAAHKSASGANATKLGT IVVTATGFEDMLKNEVRNVSVITAEDMENRGYRDLREILEKAPGVSFHGDTVDLRGQGQK ANTSVKVLLNGVALNMIDTTPTSIPIDLVPIEDIERVEIIPGGGSVLYGSGTSGGVINII TKKGARYPYANISTKIASYNYNDLNLGLGGGVSDNLFLKTAVKGFKQRGYRKGEKNTGYY GSLGMHYKISDDQSISFDPSFYRARTYSVPTLGLAELKADRRQQGGERTFTKSTRLNFDL DYAVKFGDRFEANLQPYYQDIRILQKGFVMKDRKEGANLKGKLDYDSGEFIAGYDYLKNK GFRRINFDAAMNPMMSLSQLTIFDMQKLTHSVYALEKHNFTDLFSLSAGGRFERAEYKVD REVSTTVRRMGRIFHTQESTHVTDDKNNYAFEITPNFNYSKDGNVYFKFERGYISPGPNQ LIDKLGRNGPYVLNNLKSETFKTYEIGLKDLIYGQYVSATIFWTDTKNEIINETLGSSIT DGWLFINIDETRRKGVELYAEQSLLSNLKLSETFSYVDAKIQSGANKGKQVPLVERSKFV LGVDYEPIRNLTLMSDFKYFSSSHDANHDRIDSRTIVDLGAAYRFASGFLISAGVKNVFD EEYNYNQNLRADDYTPAPGRNYYVEFKYTY >gi|257441372|gb|ACYG01000030.1| GENE 55 68209 - 69000 1280 263 aa, chain + ## HITS:1 COG:MA2730 KEGG:ns NR:ns ## COG: MA2730 COG0500 # Protein_GI_number: 20091554 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 94 205 37 141 269 68 38.0 1e-11 MKPDYKNWVPKGMIASFAAGAGVALVLFLIFGVCGLGVSGALRGVLAGLFGAATLVLIGF TIYCIFWYRAFDYGGKRQLSRAIVEGTAKYVDLPEGGRGLDVGCGSGALTIAVAKRNPHA SVLGVDRWGFEYASFNKQLCESNARAEGVQNTSFEQADATQLPFEDGSFDAVASNYVYHN IMRKDRQALLLETLRVLKKGGSFAIHDLFSRGNYGDMDAFIAHLKEQGYERVELIDTTQG LFMGPREAKWLMLGSSKLLAGKK >gi|257441372|gb|ACYG01000030.1| GENE 56 69048 - 69254 123 68 aa, chain - ## HITS:1 COG:Cj0965c KEGG:ns NR:ns ## COG: Cj0965c COG0824 # Protein_GI_number: 15792294 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Campylobacter jejuni # 1 66 1 67 124 78 53.0 4e-15 MKIRIYYEDTDAGGIVYHANYIKYCERARSEMFFDPEVKPFSKDGHFVVSEIWAKFKKLS RPGRHINS >gi|257441372|gb|ACYG01000030.1| GENE 57 69254 - 70255 626 333 aa, chain - ## HITS:1 COG:no KEGG:Cphamn1_2323 NR:ns ## KEGG: Cphamn1_2323 # Name: not_defined # Def: hypothetical protein # Organism: C.phaeobacteroides_BS1 # Pathway: not_defined # 126 326 3 207 219 66 24.0 1e-09 MKKAQMRGYLYEIFISYWLEQNGFVKCKKDCSGILNGNIVSEDGEIEGRGTNHQIDFVGI YSKNIPFVFPIRLLTECKFWDKKVDKSFIRQYIGTYKDISENYISSQRNDKYRFLDIPII FSASGFDEEATNLAWAQGINIVSHSRLPVLNNMLQAINNIVNTIEQNDCNFNEVKTYIKK YLDCHEICIDEYTELLKDCFHHNNALEIPKINTFLFATNDKGALINLISKDEFPDKLFSE TNEADCGIYFENDSSGSNNERVFYIVLNMDDMRRRFYFQANEALMRKDFPELPLDARLSE KIKFISELSIIKEIKGLTRIIKLKVNFESRGLM >gi|257441372|gb|ACYG01000030.1| GENE 58 70907 - 71809 758 300 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1612 NR:ns ## KEGG: CCC13826_1612 # Name: not_defined # Def: prophage protein GP49 # Organism: C.concisus # Pathway: not_defined # 1 300 50 372 372 281 45.0 4e-74 MKKKWESLKKGYVLQNAGAKAGEASSHVYIGGGYTGALAFAGAEGAIKGDIILPKPLAWQ AERAGEVLLLDLDHFIFKFDPASGEFSDLSQRLSFKNGKEFTSFVCAAKDTAAFAMFGQI FTFRGGEISPLSEYKSEMKNYTPTLCAAISDDGARLALHCKQNEIKILSTLNGEILNEIK GDFGIFDKICFLADGSVLGKERYAGKLVCLDAASGERLKPAWLRGECAEADELCVSADGL RLALISYGKAHIVDLKSANLTLSFELEHVVKRCETKFENSNGNKNLVVRTDYGCFSLYQV >gi|257441372|gb|ACYG01000030.1| GENE 59 72011 - 72565 659 184 aa, chain - ## HITS:1 COG:STM1834 KEGG:ns NR:ns ## COG: STM1834 COG1971 # Protein_GI_number: 16765175 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 4 179 25 204 206 112 40.0 5e-25 MELLLIAFALAMDSVALSISNGAKYPNFKFAQIARVAFFYAAAQFIMPLAGYALGINFVK FISEIDHFVAFGILSFLGIKMIAESHREQDEPDLRLSTKELVLGAIATSIDAMAVGMTFA FGEINILYACSVIGLVCFALCVAACYAGKLTGEYLHSKALVLGGVILILIGVKILLSHLG VIDI >gi|257441372|gb|ACYG01000030.1| GENE 60 72652 - 73281 716 209 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1655 NR:ns ## KEGG: CHAB381_1655 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 208 1 212 214 105 30.0 1e-21 MLKKLIFCLLPLFATASWEEVAVKGLDVMLSAGAGDSENFKNSLSTLIERAANEYERTGV QDYELDLPSYITERAGKKSIAVQNMQRLASKKLSLAIEPIKKLVLAKIKDMSEADTKAVM SGEVLFSHYLRTNAFDEIYEIIRPLARELGADASFAKSFKSAVGREPGDDFSSEFSSAFI NESFDFLSKNEREFRKNSGAILNAIKTIR >gi|257441372|gb|ACYG01000030.1| GENE 61 73325 - 74854 1210 509 aa, chain + ## HITS:1 COG:TM1722 KEGG:ns NR:ns ## COG: TM1722 COG0697 # Protein_GI_number: 15644469 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Thermotoga maritima # 207 491 6 267 288 100 29.0 8e-21 MKNSISELAENFNSKSALNFATLSPNLKSAQIPSCAESKALNSVKVSTINLRENSARNFR RNFILHCTKNFTCNGANSASSLSRASAANDPNLSSAKSLAAAHTRRYERNFTWILANDPG AARTPRSFEFKNLKVRNFAKKSNSVENSSSARSLNPAQNFDFAQSSDSTQSPAAAQNSAS AQNCTQGSNPAQSRTQNPAPPSRLWDLGLLFVAIVWGCTFVPVQRALHSGDVFSFLFWRF LAASIFTYLACLRFGVKFDRGTIERGVFCGLMLFCDFSCQTIALDYALSSTVAFILGLNV VIVPFLMLAFFGKKVGPSAFGGAVVALLGLYLLSGASGAVGFGIGERLTLVSAFAYALHI VFTGVCARKSNLYGFVIVQFICVCVCALIAAVFVPHAEFEGEIKVLGNLIFSPDFDFVFA LVLTSIFATVAAFVIQTMAQNRGVSEIKTVLIFALEPVGAGIMGYAFGEKLSALQILGAA LILAGILLSELGGLLGAKFAKDRACEKAD >gi|257441372|gb|ACYG01000030.1| GENE 62 74807 - 75610 906 267 aa, chain - ## HITS:1 COG:Cj0141c KEGG:ns NR:ns ## COG: Cj0141c COG1108 # Protein_GI_number: 15791529 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Campylobacter jejuni # 1 261 1 261 267 206 49.0 4e-53 MAEILSYDFMRNALLGGLLVSIVCGVVGSLVVINRMSFIAGGIAHGAYGGIGIALFLGIS PVLGASVFALFLGLLIAYVTLRNTERFDAVIGAIWAFGMALGIIFADLTPGYKSDLMSFL FGSILAINHENLIFIGICGATFAALTACFYRQFLAISFDKEFALLRGVNTSVFYYVLVVM ASLAVVASIQIVGLILVISLMTIPPFIAEKISKSLGSMMAISCGLSALFCAAGLVLSFKL NLTSGASIILVASVCFFASSIFSKLRA >gi|257441372|gb|ACYG01000030.1| GENE 63 75603 - 76370 864 255 aa, chain - ## HITS:1 COG:Cj0142c KEGG:ns NR:ns ## COG: Cj0142c COG1121 # Protein_GI_number: 15791530 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Campylobacter jejuni # 6 251 6 246 284 242 50.0 4e-64 MADVTIRNLNFAYEKREILKDINLSYELRDFLAIFGPNGGGKSTLLKLLLGLLRPSSGTI EILGRSPALARAQMGYVPQFIAINKSFPISVLEVVLMGLIDKKILGFYSKSEREQAMQAL GRVGMQDLADCRISELSGGQRQRVYIARALCAKAKILLLDEPLASIDTMGQVQIYELLKS LNESGCGIILISHDVQLALNYANRALYVANGSAHTHEIDPGGRAEFLDHLRREHGHFCAV DLALNECCCKEGENG >gi|257441372|gb|ACYG01000030.1| GENE 64 76470 - 77384 872 304 aa, chain + ## HITS:1 COG:Cj0261c KEGG:ns NR:ns ## COG: Cj0261c COG0500 # Protein_GI_number: 15791632 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Campylobacter jejuni # 11 304 2 236 239 132 31.0 6e-31 MEKIGEKSDENSWDKKSESYAKFNGELGDFGKRVFEILRGWGVSFAGKSVLDVGAGTGVY SLYLASLGAKITAIDSSEGMLRELRRSAEEFGIPLQNVLNLSFAEFCERLSRDGFADAAG EDFKIYPRPQSKISNVKAQESAARALNLKDAMSKTRESENFKIPVVFDIAFLTMSPALKS TEDFEAFLALGERKIYLNWASERNSSMLAPLFERFGTGAKRLATAAEKFEALLKARDIKF KSEILTERREQKRSLQEAVQNAAWHLHMDGAEASEREIEEILKKWVRGGMINDEIEASFK LFYI >gi|257441372|gb|ACYG01000030.1| GENE 65 77347 - 78219 745 290 aa, chain + ## HITS:1 COG:Cj0020c KEGG:ns NR:ns ## COG: Cj0020c COG1858 # Protein_GI_number: 15791419 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Campylobacter jejuni # 23 282 20 300 304 99 28.0 1e-20 MRSKRVLSCFIFSLVPLLGLCGNLFTPLEMPKYDPQKARLGAKIFTDVRFSRKGRSCESC HNFYLNDSGASVRDGRVPTLINSYYFDRYLGDYNFAGFEARIAVSVFSENELDASEDRIL ELIRKNLAYKQAFESAYGEANTANFIDALKEFLKSKTAINSKFDRFLRGEVKLNDAEYNG YVLFVRLCSACHNGVSLGTGSFTKIRPSVEEEDAPRHRLTSDGFELRRVPSLRNITQTAP YVNGQTDLRLAVRQIAKDLLKYDLSDGELDALMSFLATLKGEMTEAQDER >gi|257441372|gb|ACYG01000030.1| GENE 66 78209 - 80629 2106 806 aa, chain + ## HITS:1 COG:VC0130_3 KEGG:ns NR:ns ## COG: VC0130_3 COG2200 # Protein_GI_number: 15640161 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Vibrio cholerae # 598 798 16 214 218 132 36.0 4e-30 MKDKIMWALMVGIMILGIIIAGNYFSSLRDVARFSTISRELALIDNADNRLNILFDAKIA RRDFSIANADMRGIYQVLQALQKDKIIDKIGLSSDVRAIGSAFSDKISLLDELGALNSQN LILFQSLQQKFLSSGANAQRANLYSQILGLNYKNRSEISALKSALESADASSPDEAAFIG IARQILRNFERQNIIVSDNLSLLNERFASLRERFSYASEEFYGSFMQMTMLYTAVFLSFL LLTYIINSDALRSKRALAPYHALCEQAGEAIVLADQSFKILYANKSALSLSGYEQSELQG SDLGVLMPKDKGIELPAMVNKGAKDTRLLRKNGELADVSLRLSNIAAASKPPLYALYAHD IGEREIMKLALASAKESLNNQVYIDHLTGQGNEAALYELINAEKTGVAIYITIVNFANLR LFYKAETTNEILRSFARTLAMCIESHEIKASIFRIQSDEFCLFYEGLNVARDVEIINKYF TDKVFNLHTTEGFASAPLNITMGVSERADVAGGANRVFQAVMAMYEAQSKNEHVGFYSRP NAIEEKYLQNQIMINTIQNAIKKNQVFVLVQPIFDITHRDPSGNTYGTEGGDYVPLVYEI LIRLIDRSGKTRCPGEFIDIAKQTSLYIPLTQVVINEAFRLLDRFAGTCFSINLSYFDIA NEGIKELLERKLASSPNASNLFIEILESEEFDDYESLRSFIAVAKNYGCKVAIDDFGSGY SNYYRILTLDVDYIKIDGALIKNIANDKNSRAIVETIANFARKQDYELIAEYVENHEISI ILEEMGIKYMQGYFYSKPMEPSRIKF >gi|257441372|gb|ACYG01000030.1| GENE 67 81222 - 82730 1565 502 aa, chain - ## HITS:1 COG:Cgl2515 KEGG:ns NR:ns ## COG: Cgl2515 COG0427 # Protein_GI_number: 19553765 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Corynebacterium glutamicum # 1 502 1 502 502 505 51.0 1e-143 MNSRVQNEYLKSKVMSAEKACELIPNGASVGFSGFVGAGCALALPQALAQRATALHEKGE PYQIEIFTGASTDPLLDGVLAKAGAVSFRAPFFTDTDMRRAINSGAVRYADVHLSSLAAQ LKAGFFPHLNFAVIEVVAIKESGELVPSTSLGNNQAWLDIADRVILEVNYYQPLELEGIH DVTDLRLPPHAEDLPIKHVGDRVGSPYMHVDPAKVVAVIEARTHDRVNNFTAVDEISSAI GRNVVKFLKNEEACGRLPAKKLLPLQSGIGNVANAVLSSLQDAGYQGLQCYSEVIQDGML DLIKRGVVGTASATALSLSPAGVEEFQKNIDFYRKHIILRSQDVSNSPALIRRLGVVSMN GMLEADIYGNVNSTNVMGSQMKNGIGGSGDFARNGYLSLFLSPSLAKDGAISAIVPFVSH VDHTEHDTQVIITEYGIADLRGKCPRERARAMISIAHPIYQDALRDYFERACAQPCAGHT PHILSEALSWHQRFKDTGSMKA >gi|257441372|gb|ACYG01000030.1| GENE 68 83680 - 84198 528 172 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461087|ref|ZP_05626185.1| ## NR: gi|257461087|ref|ZP_05626185.1| hypothetical protein CAMGR0001_0219 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0219 [Campylobacter gracilis RM3268] # 20 172 20 172 172 245 100.0 1e-63 MKALKLALAAALALSLANADGKAKEFKFSGAKTSALLAKCGKKDAAACYEAAMRYELGGR GVVRNRLKAQGFFADACELATLAERKQGDKMGGAGGRAMSDLRERACLGNAAALESFASG QCRSLVIYDELCEGGSQEACDNLARMKRDGWAPKESCSEEIVAKFGDGKPQR >gi|257441372|gb|ACYG01000030.1| GENE 69 84464 - 85030 490 188 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1720 NR:ns ## KEGG: CCC13826_1720 # Name: not_defined # Def: Sel1 repeat-containing protein # Organism: C.concisus # Pathway: not_defined # 75 188 22 135 135 139 63.0 4e-32 MKKFLFLALFCALAANCDESARVDKISAAGKADKTTSIGETAAQNAHFLKSGEASAGSQS SADAVIQTDGISRADLQSCIVKSDEGSCERVARGLKSGCERKDQLSCFFYADALGRGLGV EKDVVASFELFREQCDAGSSEACYELSVKYLQGIGTSQSFELSGQALDRACKMHNKRACA VLDLLPKN >gi|257441372|gb|ACYG01000030.1| GENE 70 85168 - 85638 604 156 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0580 NR:ns ## KEGG: CCV52592_0580 # Name: not_defined # Def: putative BcpB # Organism: C.curvus # Pathway: not_defined # 20 155 28 162 165 131 49.0 7e-30 MLFLRPISIKRREMINLPKNCVVFTYPKMGDSGKFLPEELRGVAGLTGCTLQCKAYESAF AQIKALGFELIAVGSMGEAGTSEFKRATGATFEFINDEKFELEAPLGLETFTTGDGKKFY HRQTLIFRGGKEIKRFSRIAEPEQDAQNVLAALKSL >gi|257441372|gb|ACYG01000030.1| GENE 71 85734 - 86816 822 360 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0874 NR:ns ## KEGG: CHAB381_0874 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 21 295 24 291 324 113 31.0 1e-23 MDIDRAIEELAKKQQQCKIKFLKPLILLLCIAVFSVGWFIHGLIQNEYSSAVLMSAMIPI IAVSCLWGIFDDSIAKWEYNAFYKNAFIRAIISDIDPAFRYEPQSGIDEEEFRKTGIYSN NEFVAEDQIDGVYKGVKFSLSEAIKIYETRESMRLVELSQRSKSDLSATFLLSAIALWNA WRLGEYVQAFSGSVLVCEFYKKFKGQTIIADRSPGTKFLGDQELMDDVIFGEEFRVFASD KIEARYLLTPSFMGRLGALKLRLAPNIALSAAFMDGKFYLFLNGAKNRFEAALFSPRTTL RDAERIKAEVLQLLGIIDELRLNEGFFGGASESGEPANSPPPGGEELQRLRDKGLSSRDR >gi|257441372|gb|ACYG01000030.1| GENE 72 87028 - 88038 1453 336 aa, chain - ## HITS:1 COG:AGc359 KEGG:ns NR:ns ## COG: AGc359 COG2899 # Protein_GI_number: 15887561 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 322 9 354 368 256 44.0 5e-68 MKYFYSSFAVSFIAVIIAFYIGGAGAAYICVLLCVLEISLSFDNAVVNAKVLKDMAPVWQ SRFILWGIPIAVFGMRFLFPVLIVAASAHLGLWETLVLALKQPQRYHEILSENEAQIYVF GGAFLLMVFCDFFFDAQRELHWLGIIENNGLVRFLKRIPNAPTLIALAAGLVLLAKTGSA TLGAAYFGAILLYLLISCFDRLFGTDGVKNGLAGFLYLETLDASFSFDGVIGAFALSDNI FIIMLGLGAGAMFVRSITLYLIARGTLSHFAYLEHGAHYAIACLAFIMFAKLKFEVSEII TGTVGILFIALSLLSSVLYNRRNKRKLIETIAGNNE >gi|257441372|gb|ACYG01000030.1| GENE 73 88131 - 89450 1691 439 aa, chain + ## HITS:1 COG:Cj0006 KEGG:ns NR:ns ## COG: Cj0006 COG2056 # Protein_GI_number: 15791405 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Campylobacter jejuni # 1 439 5 435 435 402 53.0 1e-112 MLTNPVFISICVMCALCLLRCNVMLAILIGTICAVLSSKIPLGDAINLFINGNPENAGSL GMGGNLETALSYLLLGVIASAISKTNLTAILVRAVANLISDKKYVFIFSIAFFACFSQNL IPVHIAFIPILIPPLVKIMNSLKIDRRAVACALTFGLQTPYMALPLGFGLIFMGLIEKNM NANGIAVSLSDISSVMWLSAVPMLAGLILAVIYYRKPREYAETKQSLDAHFSELKMGMHE WGALAGIAVCFAVQIWIKSLPFAALSGILVMLASKGIEWKKLDNVFDEGVHMMGYIAFLM LIAAGYGTILKETGGVDELVHVASTLSGGKLGGALLMIGIGLLVTMGIGSSFGTIPIIAT IYCPLAAQLGFSTAATIFIIGVAAGIGDAGSPASDSTLGPTVGLNIDGEHSHIWDTCVPT FIFFNIPLIIFGIIFSMML >gi|257441372|gb|ACYG01000030.1| GENE 74 89709 - 90152 417 147 aa, chain + ## HITS:1 COG:jhp1395 KEGG:ns NR:ns ## COG: jhp1395 COG3399 # Protein_GI_number: 15612460 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Helicobacter pylori J99 # 1 147 1 145 145 123 50.0 1e-28 MEQIYPYVQIVHLICAIIFLGYIFFDVVIFSRLKGALGADFERVKKAIGSRAIKIMPVCL FTLIITGGMMMSRWVGSANGGYFGTPLQKIFMLKVTLALIIAACVAINLSCRAMGKPAPE FLRENIHKIAFVFGFIIVLCAKLMFVV >gi|257441372|gb|ACYG01000030.1| GENE 75 90766 - 91575 906 269 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 1 251 1 263 279 164 36.0 1e-40 MKKFILSLLVAALASSALCARSLSEIKSSGVLRIGVYDAQPPFSKIEDGVHQGFEVDMAN TIAKDMLPSGGKVEFTSVLANQRIKFLQEDKVDAVIATLTVTPEREKQIDFTTPYFSVNI GILTRVEDKIKSLNELQDKTILVLSGGTAETYFEKQGYNIARCDNANACYKALKAGQGDG YADDNLVVLAYPVLDKKVEVNIKNLGTSDFLAIGVKKGNSELLDFLNGELIKLSKEGFFK NSFDNFIEPYYKGTAEKKYFLLDDLYSLL >gi|257441372|gb|ACYG01000030.1| GENE 76 91598 - 92401 1053 267 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 1 249 1 263 279 148 36.0 1e-35 MKKIILALMLAVCSLLSNTLTQIKEKGVIRIGIDGSSPPFSVAKDGGYSGFEILLIEGLV KEIFGDKGSKIQYVVTVGDDRIKAVQDNRVDLDIALISVTKEREKLVDFSDPYFSVNIGV LTRSDDNIRKVSDLNGKTILAQPGTTVFDYFTKQGYNVVPCASANECFNDLKSGKGDGYG DDNLLVFAYAVVDRKVEVNIKNLGSTDFLAIAVQKGNTELLNAVNAGLIELSKKGFFTKI FDESIEPFYKGTIDKKYFLLDDLYSLF >gi|257441372|gb|ACYG01000030.1| GENE 77 92467 - 93270 899 267 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 1 249 1 263 279 145 34.0 9e-35 MKKIIFALLIASCSLFANSLAQIKEKGLIRIGIDGSLPPLSVSEDGKYSGFEISLIEELS KEIFGDKGGKIEYVVTLGNDRITAVQDNKVDLDIAAITVTKEREKLVDFSNPYFSVNIGV LTRTDDNIKTVDDLQDKEILAEPGTTAFDYFNKEGFKVISCASSSECFRALKSGRGSGYA DDNMVVLGYSVVDRKVEVNIKNLGTTDFLAIAVQKGNDDLLNALNDGLVKLSKNGFFKKI FNDSIDPFYKGKAEKKYFLLDDLYKMF >gi|257441372|gb|ACYG01000030.1| GENE 78 93287 - 94090 920 267 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 1 253 1 267 279 150 36.0 2e-36 MKKILLSILLGAGALCANSLADIKQAGEIRIGLQDSQPPFSFDDNGTLKGFEVDLANELV KNLFGNKKIKIDFISVASKDRVPSLEQNKVDLIISKLTVTKDRVQKVDFSYPYYSVQIGV LSRKDDNISRIDQIAHKKILSVKGTTAEEHFKNAGYEIATCADANECVARLKAGEGIGFA DDNTVVLGYARNDAALDAKIINLGKVDYIAVALSKGNTELLDAVNSSLVKMYKAKFFHKA FDEDIKPYYGGKIDKKHFTLDEVYSLF >gi|257441372|gb|ACYG01000030.1| GENE 79 94312 - 95268 662 318 aa, chain - ## HITS:1 COG:alr2178 KEGG:ns NR:ns ## COG: alr2178 COG2207 # Protein_GI_number: 17229670 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Nostoc sp. PCC 7120 # 101 307 95 321 332 100 30.0 4e-21 MSKEISLDDFLQKISNDIEPSKQCGYNKTELESESIKFDFSSFYTGGEIGYYSSDIICRD SLLHRHERGSRYSFLFFNTGENPICFRSDKDQFVLNKGEFWLGTMQSKLRGVHELENKHY KSSCIALSTAFANELGILKNLNLDQAVCMKKFKTSAVQNIILKELENAAIYDGKIREIFM ESKILEMLYRSFHKFNEPENALSLDENRIKTVQKAKKILLENMQNPPGIKELAHLCATNE FALKRDFKAYFGTSVYAMLTNERLEIAKELLSLDQISVNEAAKMVGYNNLSHFSKIFRAK FNILPTQLKKDIKFYYSD >gi|257441372|gb|ACYG01000030.1| GENE 80 95591 - 97348 1435 585 aa, chain + ## HITS:1 COG:YPO1313 KEGG:ns NR:ns ## COG: YPO1313 COG4771 # Protein_GI_number: 16121595 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Yersinia pestis # 2 585 79 665 665 305 35.0 2e-82 MVEDLPSAFTATLGAASRKGISLRGLSQKYTKILIDGKPATSDSAYKGLRSIGSSQNFLP PANAIERIEVIRGPMSSLYGSDAMGGVINIITKGFSNELSGNVNGYYTFAKKSQIKGDYQ TGFYLNGAIVPDVLGIALYGRFFEKIEDKEPYANRNNEETNMGAKLMYNITQNDEVALDY RKVNNKFRRTYGRTRTTSGGNNDIAKEDMKGYTASLSHQGKYDKFMIDSYANYDSMKESG AQDLHLRTTTLNSKGSYFFDSNALSLGVQYRSERLNEAATTADEANVKRWDYSIYGEDDF YLTDDLTLTGGIRYNRDKDYGGHISPRAYAVYRLNESFSIKGGVSTGYSTPDIKQRSEGL ALPFAGGQGAQIGRSSLKPESSISYEGGFSYDDNNKFNFSATAFYTEIKDGISTKLICRP RPGNPCVHNGKTYRRGIWDTINIGEAEVRGLELSSDYQILDNLKLHANYAYTKSEQKTGS EKGKTLNNFPIHSVKLGFDYDVSSKLNLWSQINYYSRTRDSLSYDEDIRSYTLFDLGANY KVTKDASLNFTLYNIFNEFVLTRSGNYQMMVVDGMKAQVGFNVNF >gi|257441372|gb|ACYG01000030.1| GENE 81 97399 - 98544 688 381 aa, chain + ## HITS:1 COG:PA4513_1 KEGG:ns NR:ns ## COG: PA4513_1 COG3182 # Protein_GI_number: 15599709 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Pseudomonas aeruginosa # 7 372 2 361 395 115 23.0 1e-25 MAILKRKKFWFNVHLVLTLICCVPILIIALSGAIISYHDEIIDALNQSKSFVSPSGKDAL EPAEILNIFRKVKPGFTLSYYRIPQNKNEAIRLSGTDSSGEFKSYFIDPYSGEITSENIG DTFIGVILNLHTNLGFGLSKNETLRLIGKNIVALSTVMFILVLISGVVIYYPSFRGKILR AFRINFKARGYTFLYSLHGAVGVLLLPVLLTISASGLYWSYDWIAKITNRALGEKEIFRK TSFTEVRGFSLEDEDKILNLQTAFDIFKRECGENYEFFNIIAQKDGENFMIFYFDKGEKS EEHMNTMSVNVKKGILRHARYDDTKSTMPRPFAIHKAVLSVHSGYIFGEAGKFLFCVAAI SVLFFIVTGFWMSIKRIGKKR >gi|257441372|gb|ACYG01000030.1| GENE 82 98734 - 99666 1261 310 aa, chain - ## HITS:1 COG:Cj0373 KEGG:ns NR:ns ## COG: Cj0373 COG1052 # Protein_GI_number: 15791740 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Campylobacter jejuni # 1 307 1 307 311 321 53.0 1e-87 MKIVCLDAATLGSDADLSEIASLGEFESYEMTESAQTAQRLAGAGVVITNKVLITDEIMA QTALKLICVSATGTNNIDMQAAQARGIAVKNVAGYSTNSVVQQTFASLFALTNALGYYAD YGSSGKWYESEIFTHINAPISEIYGKEFGVIGLGQIGEKVARIAAAFGANVRYYSTSGAN DNGEFARVSLDALLRACDIISIHAPLNEKTAGLIGEAELAKMKEGAILMNFGRGGIVDEE ALARAVDERGLRVALDVLQTEPMRADHPLLRVKNRRNVVITPHIAWASIEARKRLIKMIA QNIRDFMSGK >gi|257441372|gb|ACYG01000030.1| GENE 83 100224 - 101408 1542 394 aa, chain - ## HITS:1 COG:Cj0372 KEGG:ns NR:ns ## COG: Cj0372 COG0754 # Protein_GI_number: 15791739 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Campylobacter jejuni # 1 392 1 389 389 529 66.0 1e-150 MQLKKITPLSNEYLEKLGFYWHTDADETPYVSDEIVRVSAAEADAYYEAANELYEMFVAA AQHVIDNNLFHELGVPFSLVDLIKQSWENEVHWHLYGRFDFAGGLDGKPIKLIEFNADTP TAVFETAIIQWAMLKENGMDEASQFNDLYDALRDNFKRLVVLDGELEDFSKFYEGWKILF SSVAGNVEDEKTTKLLQQTAEDAGFKTRFAYVDEVEFNDEEGVFFDGENYEYWFKLIPWE AIAIEEGELALILKNIVQNQKAIILNPAYTLLFQSKGIMKILWDLYPNHPLLLQSSFSPI IGKKMIKKPFLAREGANVAIFDADGKKIEENGGEYGNQKFLYQEFYELNKDERAQSYQAG VFFAYEGCALGFRKGGEILNNLSKFVGHYIEDAK >gi|257441372|gb|ACYG01000030.1| GENE 84 101767 - 102096 320 109 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_1659 NR:ns ## KEGG: CFF8240_1659 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 1 101 98 200 211 107 72.0 1e-22 MAEENAKIDAGTSNLTNQNAQLSSGGMSLGEAILASAAGAIIGSWIGGKLFNNPAYQSQR QTAYKSPSAYSRSVDSFNQAKQQNDKARSGRSGFFGGSKGGKSGGFFGG >gi|257441372|gb|ACYG01000030.1| GENE 85 102186 - 102353 107 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461111|ref|ZP_05626209.1| ## NR: gi|257461111|ref|ZP_05626209.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 55 1 55 55 90 100.0 4e-17 MKLRKIASYALVSGFGLVMAGSLAGCDDRGQEQNVRLQEGALSGSKRSRRENIKF >gi|257441372|gb|ACYG01000030.1| GENE 86 102350 - 102988 731 212 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0040 NR:ns ## KEGG: CHAB381_0040 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 212 1 205 207 134 46.0 2e-30 MKKVSIGEAAEILGISKEAVYNRIRRNSLRAEENGGVRYVLLDDEMQQSEPASQSSAKSS RTGGGAGTQSFIDYLIKEISELKGKIEALQSDKDRLHKEKEEILIASKDEIKLMYKERDE KLRYFLSFFDKPLLSSKSREAKPYDVEIKEKTFDRSEWTSLAKFVKSLKRKKRPKAQSLI IENIGKSEFIRVEGNELLINQSLDIKSLKGSK >gi|257441372|gb|ACYG01000030.1| GENE 87 103267 - 103890 716 207 aa, chain + ## HITS:1 COG:Cj0368c KEGG:ns NR:ns ## COG: Cj0368c COG1309 # Protein_GI_number: 15791735 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Campylobacter jejuni # 13 204 14 205 210 77 31.0 2e-14 MPESPKYKKSEIRCKLILDAALELFLAKGYEATSLSDIIELSGGSLSSVYKYFDNKESLF LRIIELQSKKLDERMNERMRINKDLKLREYLQEFAGIYLEFLFTPEAIKFYRLILFSGFN GALSQSPKIFLKSGVLGSPNALDEYLAAHADEFAPGRTAKSLALYFCFLLREPHFSRLLF FDEKLNFKASELIKDRIDMFLLGVKKR >gi|257441372|gb|ACYG01000030.1| GENE 88 104217 - 105557 421 446 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 3 439 4 444 458 166 26 6e-40 MDYDIIVIGFGKAGKTLAAKSAALGKKVALIERSPQMYGGTCINVGCIPTKRLVTASKEA GFVNFGVLGEYFVLSMQKKDELVEALRAKNLAMLKGNPNIDVIDGEGSFTSANSVRVLSP DGQTREISAETIVVNTGSREVEPSFEVNSQIAYSSEEILNLKILPKHLVIIGGGFIGLEF ASMFAGFGSKVSVLMRSKFMKNEDEDVAASVKSALQAQGVEIIEGCEFLSLKGDELKFNL AGESKAVTADAFLYALGRRANTGELNLAAAGVQTDAHGNIITNEHLQSSAAGIYAAGDVR GGEMFTYTSLDDFRIIFSALFGDGARTTKNRAPHASVLFTHTPLARIGLSERQARESGRE IKVLKLSMAAVPGAKVVAHDEGMMKAVVDAASGEILGAALHCVNAHEIVNELAIAMALGA KADFFKNQIFTHPSISEALNDLFGQF >gi|257441372|gb|ACYG01000030.1| GENE 89 105736 - 106293 506 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461117|ref|ZP_05626215.1| ## NR: gi|257461117|ref|ZP_05626215.1| hypothetical protein CAMGR0001_0249 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0249 [Campylobacter gracilis RM3268] # 1 185 1 185 185 372 100.0 1e-102 MQPKIRNLCLSLENRILNLHPFNPEQVCCCIATWFIENKILFRMKEYDGCGLDELLKLNF KDYPTELSIYGDGKAKDLLGAKIIKSDEYRLINKIRALKDQKSLRLVYEELNSIVFDSLV VSVDLDLAYECPQWSASDYRVMLNEATDKIVFAYINCEKKFYPHTLTECQIDCNLAIPKR GYFIN >gi|257441372|gb|ACYG01000030.1| GENE 90 106401 - 106766 369 121 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461118|ref|ZP_05626216.1| ## NR: gi|257461118|ref|ZP_05626216.1| hypothetical protein CAMGR0001_0250 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0250 [Campylobacter gracilis RM3268] # 1 121 1 121 121 218 100.0 2e-55 MTDYFVRKESAIKLNKLLGLDSTGDEQDWELELADIGKITSMLNLLENKTLNFHDKIALS HLIVASFEKEDEELGSVDGDRIKIFADFLGDNLQIKNIVREYWVVAYGNLSKNLAYLIFG D >gi|257441372|gb|ACYG01000030.1| GENE 91 106802 - 107284 367 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461119|ref|ZP_05626217.1| ## NR: gi|257461119|ref|ZP_05626217.1| hypothetical protein CAMGR0001_0251 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0251 [Campylobacter gracilis RM3268] # 1 160 1 160 160 316 100.0 4e-85 MIKNEFEFLIASVPDREKVVAEIWHMDREALIQINHETNKLLVAATETRHNINFYELIWA LYAGGLWLKDGNQTPNFTEQFEKFSKRNGRCSKNIFKFTRYENKVSIEHKGNLIAHVIKD GDALSVGLLNFGFELKDCVELENFVWALQNSRKLLDGAVV >gi|257441372|gb|ACYG01000030.1| GENE 92 107315 - 107719 317 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461120|ref|ZP_05626218.1| ## NR: gi|257461120|ref|ZP_05626218.1| hypothetical protein CAMGR0001_0252 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0252 [Campylobacter gracilis RM3268] # 1 134 1 134 134 238 100.0 1e-61 MLNLEGQEFRVKGIYNNIEEASNIKQQKMYWLNENNVEGYISSYIELMCTLFDDFDFDDF VKNTACRLGFPPKLIELLQEFRDAIKHYQAKDETDDRAIIEDPNWHIVVKKARDVIKEWN KYDLGSNDRAFKLN >gi|257441372|gb|ACYG01000030.1| GENE 93 107760 - 108113 356 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461121|ref|ZP_05626219.1| ## NR: gi|257461121|ref|ZP_05626219.1| hypothetical protein CAMGR0001_0253 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0253 [Campylobacter gracilis RM3268] # 1 117 1 117 117 202 100.0 5e-51 MLSGREIYENFLLRFSDNERDIMKNLAKNIYELNKREFIIEFDENNIYKVRFYDDFEGCC DPGLEEGEEGWDELFFGFEFVVLEVLSTRATKFKKGDYIEINYKNYPKIFDMDRNLI >gi|257441372|gb|ACYG01000030.1| GENE 94 108160 - 108687 419 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461122|ref|ZP_05626220.1| ## NR: gi|257461122|ref|ZP_05626220.1| hypothetical protein CAMGR0001_0254 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0254 [Campylobacter gracilis RM3268] # 1 175 11 185 185 327 100.0 2e-88 MQQNEELYYLVAGFIYDWCDIELFCDEFYKMYDLESQYCATNKAEEQALKELDMMVGRFS EFDEDFKKAPNVFFKEGEIRQKAEEIFRLFSNIKISKEEFFRFLKEQRGLNFPIGVDLGE GYVMCPNCSNAMKVDERQSVITCDNKYCIAKLINPLAKLTLAEIESAKYNSQEVD >gi|257441372|gb|ACYG01000030.1| GENE 95 108701 - 109108 403 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461123|ref|ZP_05626221.1| ## NR: gi|257461123|ref|ZP_05626221.1| hypothetical protein CAMGR0001_0255 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0255 [Campylobacter gracilis RM3268] # 1 135 1 135 135 239 100.0 4e-62 MLNYKNIGSICELDSLSKSGSDIYLLIGSHFMDKIDIFSNITTDFLIGVKWIFFYAEKAS QLEDIFDSFIERHDLLDIVTLSYGIDEKTELVNLFLSKITPTTMGVSILDEKNAAENELL HEILKGVNNKNGDKI >gi|257441372|gb|ACYG01000030.1| GENE 96 109604 - 109861 323 85 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_2193 NR:ns ## KEGG: CCC13826_2193 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 85 1 85 85 138 80.0 8e-32 MSERNLQILGWAGTCLSVIMYVSYVPNIMANLDGNKVPFLQPLAAAINCTIWVSYGLLKP KKDYPLAAANFPGIIFGLLTAITAL >gi|257441372|gb|ACYG01000030.1| GENE 97 110152 - 110997 1032 281 aa, chain + ## HITS:1 COG:alr1634 KEGG:ns NR:ns ## COG: alr1634 COG0589 # Protein_GI_number: 17229126 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Nostoc sp. PCC 7120 # 1 280 1 286 287 94 26.0 2e-19 MKKVITCVDQNALAPAVRDYGIYVAKTLGAELVFIHVVEIPELGENFYGLAAGGIVLGEN DILANSYGSPTLGGVDAEKDHEEAEAMLDEYICAATAAGVKASKIIKDGDFIDVIAEYKD EAEIFVLGIKGSNNEDVGFNASVLIKELHVPSLLVNKEFSPINSVLIAFDGTDAAKRTLE FIKSSKLLASAHKHVLHINAGAAEGERMLNLAREILGTQNATFKCIQAEVPADEIIKYRR ANNLDLIATGAFTKGFFKKLFLGSVSEDILHNALVPVLVLS >gi|257441372|gb|ACYG01000030.1| GENE 98 111296 - 113800 2083 834 aa, chain + ## HITS:1 COG:PA4221 KEGG:ns NR:ns ## COG: PA4221 COG4773 # Protein_GI_number: 15599417 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Pseudomonas aeruginosa # 139 830 56 716 720 333 32.0 1e-90 MKKSKILLSFALLCSPFWLTAAQNSGASQGQSATASSASKISSSQSSRASTAPRSSTPRA SNLASNSTAPKNSAQKPGSPTAANSAPQGNAVVSPATKGVAQNSMPQSGSTANSTLQGSD GDNLGTINVTGKADLSTTEGTGSYTTGNMSTATGLNLSIRETPQSISVISNQLLKDLSLH NAEEALSKYATGISLNNDAGGNRIVSRGFYVDNIQEDGIASSVSSSVFGPLGSSKEFTDL EFYDRVEVLRGVAGLTQSNGEPGGTINLIRKRPSDQFGFNASLSGGSWDNYRGMIDVTDA VNQSGTARARLIGILSKTGSFKDYPRNGYREGVGVSTEFDVTDKTLLSAGFLWQKTVGVY DIYGVPVLDNHGNLLNLPRRSYFGSDWDKSKYEKFNVYSELSHEFSDDLKAYARLNYTDS DSMLKFGALGGANPYNGSSSHTVRYRIYDNDSKEIGFQTGLDGKFEAFGQKHDFFLNGSL SNEKLNWRETRTRDSSLASLGMNIYNWDRSRIAQPDWSSAASFKDRSSTTIKQRAISLGT RLNLTDNFHFLLGGRFSKVTYSRYYYNILRGTASHRASPSKSDFTPYAGVVWDFADNFSW YASYAEIFKPQAARDKDGKILDPVVGYNLETGVKGEFFDGALNTNVALFQIIQKNRAMSD PLNTNYSIAEGKVRSRGVDAELQGSLTENWKLFAGYTFNRSVYLKTERTSATVDYSKGAN AKRYIPKHLFKLYTNYEIPLGENRKITLGAGVRYQSKTASIYRENVAYYAAPQKAYALWD ANVGYHFDKHFSVNFAVKNIADKKYFQNTQNRVAGMNNYYGEPRNFMLTLNYTY >gi|257441372|gb|ACYG01000030.1| GENE 99 114191 - 116092 1653 633 aa, chain + ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 203 633 127 556 564 298 37.0 2e-80 MKTLKQFFEILRPHWFGKGAAKLWALLLLALGFSLAIIKISVLMNAWDKRFYDALSELKG ELIPALVGEFLLYTALIVLFIVCGSWLRKLLVIVWRERLSAMMERKWLHNANFYRTSLEG NFSAVGGSNLEKPGDVNLDENLNEHAECSAAEADSAALHRDVNELEILPSTAKQNAAGQS GASENKISSKTRADCEISKTIAKLDNPDQRIAEDSLLLVQKSVDLVKSLVYNLAKLIAFV AILWQVSKVLKFEIFGMRFEIEGFLLYVALLYTLLCSLITHLIGRRLRGLNFAKQRAEAD YRSDLLLVRENAEAVAFMRGEDAERGRFRASFGKIMRNWRSIMNTEFRLECFSASYLKIT NLIPIFACLPLYLSRAMSFGDMMQARSAFYSVQDGFAWFMDYYKQIMEWAASVQRIYEFI SRMDGESANLRACVKQSDENSARCEGLSVFTPAGEPLIEDLRFELAPAQFIMLRGKSGAG KSTALRYVAGLWRYGRGEISLPRTGVIFIPQKPYLAPLSLKELIAYPQPPRADDAEFLEI LRRVGLKKFARMLNSRADYVKILSGGEAQRLSFARIRYHKPSFVFADEITSALDLASARE LLLGLRADLPRLGMLAIVHQTGLEDIFERTIEL >gi|257441372|gb|ACYG01000030.1| GENE 100 117010 - 117498 626 162 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1714 NR:ns ## KEGG: CCC13826_1714 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 156 1 156 170 170 51.0 2e-41 MLKAGIVYKFALIVLLGCALCVLGFSGVNFARGEYDEAWMSLHKIAGFGLLCVAILHLIT RRKKLIKLWGEFLDVILSRKNPGFCNMDRIIGAIESYNIREIAGKMGFGADELAAILKSN GIKLVSADQDLRELAKFNDEKIFFILVLLIEAKFGKASGCKV >gi|257441372|gb|ACYG01000030.1| GENE 101 117510 - 118577 1375 355 aa, chain - ## HITS:1 COG:Cj1612 KEGG:ns NR:ns ## COG: Cj1612 COG0216 # Protein_GI_number: 15792917 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Campylobacter jejuni # 1 350 1 350 355 506 77.0 1e-143 MLADKLKPFLDRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIE ENKALLSDADLGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGTGGDE AALFAGDLLGAYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEGGTHR VQRVPETESQGRVHTSAITVAVMPEIEDSEIQINPNDLRIDVMRSSGHGGQSVNTTDSAV RITHIPTGLVVTNQDGKDQHKNKEAAMKVLKARLYDMQEQERLEKERKDRKDQVGTGDRS GRIRTYNYPQNRISDHRINLTLYRLDAIMAGGLFDEIIDPLIAHSQAEAIANAGY >gi|257441372|gb|ACYG01000030.1| GENE 102 118602 - 118874 372 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165436|ref|YP_001465967.1| 30S ribosomal protein S20 [Campylobacter concisus 13826] # 1 89 1 89 89 147 84 3e-34 MANHKSAEKRARQTIKRTERNRFYRTRVKNITKAVREAVESKDLDAATQALKTANESFHS FVSRGFLKKQTASRKVSRLAKLVNSLKTAV >gi|257441372|gb|ACYG01000030.1| GENE 103 119027 - 120367 1494 446 aa, chain + ## HITS:1 COG:Cj0360 KEGG:ns NR:ns ## COG: Cj0360 COG1109 # Protein_GI_number: 15791727 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Campylobacter jejuni # 1 445 1 444 445 615 70.0 1e-176 MKLFGTDGVRGKAGEFLTAELAMRLAMAAGIYFRKNSVTNMILVGKDTRRSGYMIETAIV AGLTSVGYNVRQIGPMPTPAIAFLTEDMRCDAGIMISASHNPYYDNGIKFFNSEGFKLDE KEEAQIEKIYFSDELIAEARTKMMQIGAAKRVDDVIGRYIVHIKNSFPKQKTLHGLRVVL DCANGASYRVAPTVFNELGAETIVIGDEPNGKNINDACGALSPQNLASEVKRLRADVGFA FDGDADRLVVVDENGEIIHGDALLGILAVYLKGKNRLAGNKMVATVMSNSALEDFLAKHD IALHRCNVGDKFVLETMHELGANFGGEQSGHVIFGDYAKTGDGIASALQFAACMLDTHKK ASDLSAMLKPYPQILRNLKIADKKPLEKLKGLKELETSLKADKIRSLFRYSGTENVIRLL IEGKNEKLLQKRMDEVEKFFIKALNE >gi|257441372|gb|ACYG01000030.1| GENE 104 120466 - 120927 422 153 aa, chain + ## HITS:1 COG:Cj0361 KEGG:ns NR:ns ## COG: Cj0361 COG0597 # Protein_GI_number: 15791728 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Campylobacter jejuni # 1 150 1 153 156 124 48.0 9e-29 MAKTCIKFILLFAVIFAIDQTIKLAFLNGFSWQGEFFSLELTLNRGVAFSMFAFLGENLK FIQIALISALAGYVFYHKKFFCEHWMPFALMLAGGCSNLLDRFIRGGVVDYVAWHKWFEF AVFNFADVMIDLAVVIFIFQGLRTAKKEKNEEK >gi|257441372|gb|ACYG01000030.1| GENE 105 120914 - 121306 441 130 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1791 NR:ns ## KEGG: CHAB381_1791 # Name: not_defined # Def: TM2 # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 130 1 123 124 127 53.0 1e-28 MKRNNYIAYALWFLGAFSWIAAMPIGGGLHRIYCGKFISGFAQIALFWLGSFTLWFLVGF LFWAIWGIWILLDIFFVGIWVEDLNAFASETEEDDYEGRLKKVDALFELYQKGAISKEEF EARKEILIRD >gi|257441372|gb|ACYG01000030.1| GENE 106 121316 - 121756 610 146 aa, chain + ## HITS:1 COG:slr1790 KEGG:ns NR:ns ## COG: slr1790 COG1981 # Protein_GI_number: 16329400 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Synechocystis # 1 144 18 166 210 103 40.0 1e-22 MSYYWFKFVHFAGFISWMAMLFYMPRLYVYHAENLDKPDFVRVVKKMERMLYHAIGWIAM AVTVFSGVMLIILNPGLMKMGYFHIKLLAGVLLICYHLWLYYYMYKFEKNECHRSGKYFR AINEGPTIIMFIILYAMLIMPNLPSN >gi|257441372|gb|ACYG01000030.1| GENE 107 121821 - 122984 1239 387 aa, chain + ## HITS:1 COG:Cj1654c KEGG:ns NR:ns ## COG: Cj1654c COG3004 # Protein_GI_number: 15792959 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Campylobacter jejuni # 3 380 6 383 389 305 45.0 1e-82 MQHIIKKILSSESSAGVILLLSAVFAIVAQNVEFLSKYYEAFLHLSFTIGVGSAKLDESM HFLVNDVLMAIFFFAIGLELKREKIEGQLRHFSQILLPSFAALGGVMMPAIIFSIINWGD AVAMKGWAIPTATDIAFAVGVMALLGKKIPASLKIFVLTLAIMDDLCAILIIALFYSSTI NAIYLGGAAACVAIMLAMSRLGVDKKLPFIIVAVVLWVMVLNSGIHATIAGVLAGFCIPL KTRSGSMLKDMEHGLAYPVNFFILPIFAFTNAGVSLAGISPSFLFGPVPMGIMLGLFFGK QIGIFAFSWILIKAKIAYMPENAGWPQLYAVAIICGIGFTMALFVDGLAYGGSDMYHYTD KLAVFLGSIISGVVGFFVAKAVAVKQS >gi|257441372|gb|ACYG01000030.1| GENE 108 123128 - 123655 837 175 aa, chain - ## HITS:1 COG:CAC1778 KEGG:ns NR:ns ## COG: CAC1778 COG1335 # Protein_GI_number: 15895054 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Clostridium acetobutylicum # 2 175 29 212 216 107 37.0 1e-23 MKTLVFVIDMVNGFVKFGAMADPSIAKIAPAVLKQIEAAKNVHFICDAHAERDLEMKRYP IHCLVGSPEAEVIEELAPYVSEQNVTFKRSTNGFHNLDKKILDGFDRFVITGCCTDICVM QFTLSLRTYLNETGEDKDVIVPRDAVATYDAPNHERGYYDECALSLMQNAGILVI >gi|257441372|gb|ACYG01000030.1| GENE 109 123655 - 124461 655 268 aa, chain - ## HITS:1 COG:SA1841 KEGG:ns NR:ns ## COG: SA1841 COG0388 # Protein_GI_number: 15927609 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Staphylococcus aureus N315 # 1 266 1 261 261 152 31.0 8e-37 MKIAILQMDVKVAQNFADCEQNFIRARELINRALKRGADVAVLPEAFNTSFNTAKFKELA DTNAAHTKKFLSEISQKNGAVLIGGAINSRQDKIYNSAFVYQNGAKILRYDKIHAFSLAR ENEIVSGGDKLGICEIKFQNRAVKIGVVICYDLRFCEIFRALALCGAQIVFVIAQFAQSR IEHFITLAKARSIENQIFICAVNGCGDTGQGESFGGNSMLIGPGGEIVARLGKKEAVKIA RANLDEILKFRAKMDLLKDMKPEIYKEF >gi|257441372|gb|ACYG01000030.1| GENE 110 124470 - 124949 473 159 aa, chain - ## HITS:1 COG:Cj1731c KEGG:ns NR:ns ## COG: Cj1731c COG0817 # Protein_GI_number: 15793033 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Campylobacter jejuni # 1 156 3 158 160 214 69.0 8e-56 MKILGIDPGTRNLGYAILKKDVNKITLIEAGLVKMKAENVQFQMTQMSEAIDQIFSAHKI DEVAIESMFYAYNPQSVLKLAQFRGALALKILQIFGNFAEYTPLQVKKSVTGKAKAAKEQ VAFMVKRILGINKEIKPLDITDAIAIALTHANVMRLAPK >gi|257441372|gb|ACYG01000030.1| GENE 111 125060 - 126388 1292 442 aa, chain + ## HITS:1 COG:Cj0001 KEGG:ns NR:ns ## COG: Cj0001 COG0593 # Protein_GI_number: 15791400 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Campylobacter jejuni # 8 440 5 440 440 405 51.0 1e-113 MATSQAQEILSNLEKEILPTEYSRYIKNLKFNDKNSTPEFFIYNATNEFIAKYTQTKYGT KIKELIKKQFGLNDVIVKITSKAKISPKEKVKIISEKPKSTILSENYNFENFIIGDSNKF AFECSVSVAKEPGIRFNPLFIYGPSGLGKTHLLQSIGNYCIKKGKTVICVTSEQFANDFV FNLKNNSIDKFKQKYRNCDVLLIDDIQFLIGRDKAQEELFYTFNELKDKNCQIVLTNDLP PKFLKGFENRLTTRFESGIIANITPPNLETKIAIINKKSEENRVRIPHDVVEYIAANMGD NIREIEGAINKLNAYSSILRTKITLEFTKSTLQDQIHQKYSSVSLEHVIEVISKELNVKP SELKSKTRAKNVVEARQICIYLTKQLTQNSMPKIAAFFNLKDHSAISKNIKKINELIQTD EMLKIKIEELKNKITKKDKNEI >gi|257441372|gb|ACYG01000030.1| GENE 112 126545 - 127624 1264 359 aa, chain + ## HITS:1 COG:Cj0002 KEGG:ns NR:ns ## COG: Cj0002 COG0592 # Protein_GI_number: 15791401 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Campylobacter jejuni # 1 356 1 353 355 314 49.0 2e-85 MKVLITKKLLEEIVSNTSSYLDKKDLSSITSHLLMSAKDGIFSIKATDHEIGLSYNLQNV SIETEGEATANGGKLLSVIKGLSDDSVTLETVNGALFVKQKKSKYKLPMFETRDFPSFPV VEGKNSFDVNAGILGRSLKKIYPSIDTNNPKYELNGALIDVKEGFLNLVGTDTKRLSVYK LITQSKAGELDTKILIPKKAIGEIQKLFSDKIKIYYDENVLLAVSENFEFFTKLINGKFP NYERVIPSDTAHKISIPRDKMVSGVRAINAMCEEMKVTIKKDGMIFESINEDNSEAKTEI EATIEINGEIVFGVKNRFLLDFLSNIESEIFELDFNSSDTAFVLSADGLKTVIMPINNI >gi|257441372|gb|ACYG01000030.1| GENE 113 127634 - 129946 2302 770 aa, chain + ## HITS:1 COG:Cj0003 KEGG:ns NR:ns ## COG: Cj0003 COG0187 # Protein_GI_number: 15791402 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Campylobacter jejuni # 1 770 1 769 769 1175 75.0 0 MKQNYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGYCDTIDV EITSEGSCIVSDNGRGIPVDIHPTEKIPAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVS VVNALSKKLVATIKRDGNIYRQEFAKGIPTTELEKIKTTNRTGTTIEFWPDGEIFEILEF DDEILSKRFRELAYLNPKITINFKDNRTGRDEHFHFEGGLESFVNDMNKAPAISKAVSFS DSADDVMVDFALMYNETYNENLLSFVNNIKTPDGGTHEAGFRAGLTRAITNYVAANAAAR EKDTKITGDDVREGLIAVISVKVPEPQFEGQTKGKLGSSYVKPIVQKMAFEVLSKYFEEN PIEARAIMNKALLAARGREAAKKARDLTRKKDNINSVGTLPGKLADCQSKDASISEIYLV EGDSAGGSAKQGRDRVFQAILPLRGKILNVEKARLDRILQSEEIKNMITAFGCGIGEEFN EEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPIVENGYVYLAQPPLFRYKKGKKEI YLKDEKALSEFLIETGIDMGEFEGIGNEDLIDYLKIVSNYRSLLNELKKRFSVLSAIRFL IENDEARSLGYEELFKILKPRLESEGFNILNSYVNDEGIRIYVQTPSGLEQLVIDENLFG NYIFEEAIRIYSKIKDRDVNFGKDFIEILDEIEKSSKKGAYIQRYKGLGEMNPEQLWETT MSPENRRLLKISIADAQSASDTFNLFMGDEVEPRRNYIQDHAKDVKHLDI >gi|257441372|gb|ACYG01000030.1| GENE 114 129946 - 131376 966 476 aa, chain + ## HITS:1 COG:aq_367_3 KEGG:ns NR:ns ## COG: aq_367_3 COG2200 # Protein_GI_number: 15605874 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Aquifex aeolicus # 296 468 72 245 250 86 29.0 1e-16 MSVLFSETKERENRFITALKISVPFTCVLIVFGIILFRNGEFKFDDVILFLILLICYVYY VIYQIYFGFQKTLIDPVTHVFVREEIEKILSNDLAKNRQINIVLLRIKNIIDINDRYGYK NGDEILYEYCKELSNFMAEQGFKDLPIGRFINGYFVFGVESKATNLSHILRMFEHKISSQ TIKNVEIKSEFTMLPSSYDRNLNNIVNALFYKINHLDDEEHGEKAIDVEKVLIDVFSADV MEAIDSENFSFKYQRVADKNGVKSHINLIPKLDLRSGEKITKSRILDILLLNHYDIKYDI SMMRQISRIIYFKDIDAKIFIEIMPQTLRNNEFRNEILKLIDNNLIDPKKIVFEFNEKLI YSEIKRFDEILIKFRELGFSFALSQFGGSNASFEYLKFLEVDFIVYDIEFNKNLNDEKIK NIFIGINEACAKSGIKTVMRFVDKEEFQMQLYKMGIDYIQGFCVEKPNDISNLRRS >gi|257441372|gb|ACYG01000030.1| GENE 115 131376 - 131756 239 126 aa, chain + ## HITS:1 COG:Cj1724c KEGG:ns NR:ns ## COG: Cj1724c COG0780 # Protein_GI_number: 15793027 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Campylobacter jejuni # 1 124 1 124 127 193 74.0 5e-50 MRYGEEEIEKFDIENLEVWPNKQERDYLIKITLPEFCCRCPRSGYPDFATIYLEYIPDKL VVELKAIKLYINSFMNRYISHEDSINEIYGALQSKLKPKFMKITGDFNPRGNVHTVIEIN SDQIYR >gi|257441372|gb|ACYG01000030.1| GENE 116 131753 - 132988 1210 411 aa, chain + ## HITS:1 COG:Cj0015c_2 KEGG:ns NR:ns ## COG: Cj0015c_2 COG1896 # Protein_GI_number: 15791414 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Campylobacter jejuni # 183 404 1 224 226 308 67.0 1e-83 MISSNLVEQIFKSASISRWNDYPKMVSLVELDKQAHKFIIAYFIASFERDVNINYVIEAG IFEFLARIVVTDIRPDVFHQIQKTKKKKINEWVLSVLESDLLPIQNGEFFERFKKYLNSK DHKKEAVILKAASYLSTRWEFNIVYQTSQFLNDIEELKSKVEEELEDYYELIGVRKIVMN KKLARIVDLSGRLRFQKRWAQTPRIPETSVLGHMLVVAILSYFFSLEVGACRSRTAYNFF CALFHDLPESLTRDIISPVKYGVKGLSDIISEYEMRLIDDKILPFVPEHMRDDFSYILGI RKESSKFIKDEFENRTFELGREPKFAEGSLKMFNEDKFRAIDGKALKYCDKLAAFFEAGI SISYGVKSKELLSGYNSMLEFFKAKPKIEGVDFQSVCEDFKEHFGLNRIDL >gi|257441372|gb|ACYG01000030.1| GENE 117 133137 - 133556 528 139 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_0007 NR:ns ## KEGG: CFF8240_0007 # Name: not_defined # Def: hypothetical protein # Organism: C.fetus # Pathway: not_defined # 1 139 1 140 140 156 62.0 3e-37 MNFKNHLLFVFREVFIPHHRSIEFRAKIFAAMLLAKKKQTDEDYDVIKDIAGEIYPGDEQ RIGVLVSIVKEYIIKAKTYKGLNLDSLLKEIDRDIKNNKKYIKKIDFSHLRRLIGDDDDD ALIQQRVYEFFVCEVKEYS >gi|257441372|gb|ACYG01000030.1| GENE 118 133621 - 135423 2475 600 aa, chain + ## HITS:1 COG:Cj0039c KEGG:ns NR:ns ## COG: Cj0039c COG1217 # Protein_GI_number: 15791438 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Campylobacter jejuni # 1 599 1 599 602 1026 85.0 0 MENIRNIAVIAHVDHGKTTIVDELLKQSGTFGNHQEVGERVMDSNDIERERGITILSKNT AIHYGGVKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSLGL RPIVVVNKIDKPAADPDRVVNEIFDLFVALDANDEQLEFPVIYAAAKNGYAKYDLSDEST DMKPLFETIISHVPTPSGSDDNPLQLQVFTLDYDNYVGKIGIARIFNGTINKNQSVMLAK ADGTHINGRISKLIGFNGLERTDIDTAGTGDIVAIAGFDALDVGDSIVDPNNPIPLDALH IEEPTLSVIFSVNDGPLAGTEGKFVTSNKIDERLEAEMKTNIAMRYENAGEGKFKVSGRG ELQITILAENMRREGFEFCLGRPEVIIKEIDGIKCEPFEHLVIDAPDDCTGTVIEKLGRK KAEMKVMNPTGDGQTRMEFEIPARGLIGFRSQFLTDTRGEGVMNHSFLEFRPFIGAVEKR QNGALVSMENGVALGYSLWNLQDRGVLFIAPQAKVYLGMIIGEHSRPNDLDVNPIKGKNL TNVRASGSDDAIKLVPPRVLNLERALEWIEEDELVEVTPVNIRVRKRYLDPTTRRRMAKK >gi|257441372|gb|ACYG01000030.1| GENE 119 135536 - 136123 716 195 aa, chain + ## HITS:1 COG:PA5547 KEGG:ns NR:ns ## COG: PA5547 COG0560 # Protein_GI_number: 15600740 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 3 194 15 206 207 97 30.0 1e-20 MNLVLFDFDGTITRDDSLLEFVAYVVGFKKFFRGILVLSPILAAYKLGLASNNFTRRKLL GYFFAGMSADKFDKICKKYSTTHIEDILKQSAMDKIASYKAAGDRVVIVTASLEDWLRPW CEAQGLELLGTKIRRKGGIITGEIEGQNCYGAQKVARVRAAYDVQAFDRVIAYGDSRGDR EMLEFADEAHYKAFE >gi|257441372|gb|ACYG01000030.1| GENE 120 136533 - 137345 837 270 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 17 252 30 263 279 147 35.0 2e-35 MRSLFILALFCASIFANTLDEIRQAGVIRVGVREGRPPLSESNNGKFEGFEIELASSIAK DIFGDKKGEVQFVAVTAGERIPFLKNNKVDMVIGTFMITQERKKQVDFSLPYLSVNFGIV TRKEDQVKDFAQVRDMRISIEKNPNGSMTERYLRKEKFSNLVYCKNTSECYAMMKDGRAD GYANDNIIVLAYAVVDDTLEVPFKNLGAAEFLGVGVQKGNQSLLDFINADLIKLSKEGFF KKAYEDTFEPFYRGTADKKYFLLDGIYNML >gi|257441372|gb|ACYG01000030.1| GENE 121 137263 - 137478 94 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461156|ref|ZP_05626254.1| ## NR: gi|257461156|ref|ZP_05626254.1| hypothetical protein CAMGR0001_0289 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0289 [Campylobacter gracilis RM3268] # 15 71 1 57 57 100 100.0 3e-20 MTPACLISSSVFAKMLAQNKAKIKSDLIKSPLLFSFEIIIALYILEKINASGLKFNHRAY AGLKFRGEVGI >gi|257441372|gb|ACYG01000030.1| GENE 122 137570 - 138373 934 267 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 17 249 30 263 279 140 35.0 3e-33 MKLLFTLILLCAGLFANTLQEIRNSGVIRVGVRDGRPPFSEISGGKFEGFEIELANAIAK AIFGAKQGEVQFVSLSAADRVSYLVNNKVDMVAATFVIDSARKNHVDFSMPYFSTNLGVL TRKADAIKDISRLRDMRLITEEGTTVDNYLKKEKFTNASYCKSTSECYAMIRDGKADGYV NLNITVLAYAVVDDTLEVPFQNFGKPDFIGIGVQKGNKELLDFINAELVKLSKEGFFKKA YQDTFEPFYRGTADKKYFLLDGIYDLL >gi|257441372|gb|ACYG01000030.1| GENE 123 138471 - 139499 922 342 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461158|ref|ZP_05626256.1| ## NR: gi|257461158|ref|ZP_05626256.1| hypothetical protein CAMGR0001_0291 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0291 [Campylobacter gracilis RM3268] # 1 342 4 345 345 617 100.0 1e-175 MKFQDAVKFSLRFDIIVQNLSEGDMKNFIFLWLLLAGCAFGAAKEDAAASTTQQVASNLP QPNFEIFYDENASDAQIDAGLDALLEFAAQNRGRIDEDFGEFKDRIFTAFIFNPKVLRNS KFDFERIEKILKFKPNLNYGGDGGFFSPLKLAIFFGSKFSSEIAKLYHFDKADAMRLLEL LVRNGADVKASGLLRDAAANDNFEAFKFLIANGARDTKDVVGSVAGSELIFLSDNNVSIL GYKEALPLAARKFATGAKFKEFRDGRLCYLDEILKFQSFASIDKKEIKTLIKVAMVLDDE MTAKFLLTRGLCKQKELCEFLKAQAKTYDAVKISKILSRKEK >gi|257441372|gb|ACYG01000030.1| GENE 124 139881 - 140462 615 193 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_2145 NR:ns ## KEGG: CCC13826_2145 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 13 193 14 202 212 87 30.0 3e-16 MIDRLNNDYSEKFDFLSRERIAKFRRESYARGDVIYAQKFKFIILLRGRAKLNCYENGKE FIFSFIRSGAYVCLDKNTSLEILSDCETLQINISELFGLLGDEFASSIINALIKNIYSQR ILIKEIVFAKIQTRILNFLNRIANADKIVELPFNIMTLASLLGAPRQNVSQAITKLVNDK KIVKLKGNRIKIL >gi|257441372|gb|ACYG01000030.1| GENE 125 140590 - 141156 740 188 aa, chain + ## HITS:1 COG:Cj0265c KEGG:ns NR:ns ## COG: Cj0265c COG3005 # Protein_GI_number: 15791636 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Campylobacter jejuni # 1 185 1 186 191 76 30.0 2e-14 MRKIFISFICACSLFGGEIISKTATISQDGKAIGEAEILTPIEVISSEGGVTKIKIKGVV SENYQLQIQKNMKEAEIYAIFTNEAEANFKKGKKLEDDYGEIWYEAEGIYEISSDAVAKD AKALYAEAKTNYEQICSACHRLHEPKSFTANQWPANLQEMINANYVALEGDELNLIIKYL QHNAKKPE >gi|257441372|gb|ACYG01000030.1| GENE 126 141170 - 143617 2838 815 aa, chain + ## HITS:1 COG:Cj0264c KEGG:ns NR:ns ## COG: Cj0264c COG0243 # Protein_GI_number: 15791635 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 1 810 2 835 838 613 41.0 1e-175 MKRRDFLKAGILGASAASASRIEGVTQTIFDNKKVFGANRFGPFWLNLNSSQIVSVSDFE GDKFPNTMNYSLPDNIQNENRVLYPMVRKSYLKAKGAAKSELRGKEEFVRVSWDVALDLA AKALKENFDKYGAEAIYGECYWWGGSGKIGWGRTVAHRMLKILGGYVEESGDYSTGAGLV IMPHVLGSSAVYDAPTTWKAIVKNAKNVVFWATDPAVTNQISSIPPTHDGYIGMQELKKS GIKTYSVNVMRNDTARYFGSEDIIVRPNTDTALIIGMCHYLFTNNLYDEEFIKKYTVGFN KFKAYFLGESDKIVKDAAWASKICGLSEEAIAKFATALAKEPSTILIGRGLQRADHGEQP FWALVALNAMLGHIGKEGLGFEFSLGYDSAGATNKVAPILKGLSTRIDEKYENTGSAPWK SAKNITIPSSRSIEALEHPGKQIDYDGTKIKLPHMRVAYMACGSMFTRHQDVNNIVKQWR KLDTVITAEPYWTSTAKLSDIVLPVAVEVERNDINQTGATGEYIVAYRPAIEPMGESKSD FWICEQICKRWGYGEVFSEGKDELGWMKEFYADAVEQAKGLNITMPSFEEFYDKGFVRFE KDDESSALYTRLAAFRENPAKNRLGTPSGKIELYSPVIAKMGYADCPPMPTWIEPKEWLG DAKKTAKYPIHIVSPHSRYRLHSQLNNSIIRNFAEVSGREPVLINPKDAEARGLANGDIV RVFNDRGEILAGVLITDIVPERVAAICEGAWYDPEVWGEKSLCQHGCVNVLTFDKGTSSL AQSNSAHTVLAQIEKFKGEIKPIQAFSKPKILQSL >gi|257441372|gb|ACYG01000030.1| GENE 127 144075 - 144581 473 168 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461164|ref|ZP_05626262.1| ## NR: gi|257461164|ref|ZP_05626262.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 168 1 168 168 309 100.0 4e-83 MDDPFFVDFALGAASPVYFAYHGAGSWEPIKVADNIVKFEEILTALAALEAPCSLEAIAP LADLNNEFYRELADDYARADEAREEPGYRYFSVFIEDLGADRVKTLVFLKKFFEDGSFTA TKERTQNLPLCLFSGIEELALALQDKLASLGVKFYAREISFSEIYRTE >gi|257441372|gb|ACYG01000030.1| GENE 128 144864 - 145388 454 174 aa, chain - ## HITS:1 COG:Cj0779 KEGG:ns NR:ns ## COG: Cj0779 COG2077 # Protein_GI_number: 15792117 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Campylobacter jejuni # 1 156 1 155 175 184 62.0 8e-47 MPTVTFQGKPVELSGQEINLGDRAPQVRLVAQDLSEIEIASGKHVQIIVAVPSLDTPVCA TEARKFNERAASLPNTEVIVVSMDLPFAMGRFCTTEGIKNLRVASDFRDKEFCRRYGTLI ASGALAGLSARAIFVIDTAGVVVYKELVSDIASEPDYDAALDFAELVARNSCSN >gi|257441372|gb|ACYG01000030.1| GENE 129 145478 - 146956 1276 492 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461166|ref|ZP_05626264.1| ## NR: gi|257461166|ref|ZP_05626264.1| TM2 domain protein [Campylobacter gracilis RM3268] TM2 domain protein [Campylobacter gracilis RM3268] # 1 492 1 492 492 948 100.0 0 MGEDIWGSSSNPASLASIRRKSGEEKKPLDEKPQAQPENLDLTQEALAADDTSEQNSTAQ NSIEQNSAFTKQNFIPQNSAEQNLAFAAQGLDEENSILRDSAATGSGEQDSNGKDLNSTK NAASSQNFVEQNSTWQNLASLNSDRINSTQSSTRAYDLNKAYVFYMFLGPFGAHRFYLGR IISAIFQLLGGLPFLIWLFLVVVTVMWTSIEGNDLLALINSSRPDLGVQASDLKDIEQGF FHFMVIFSVPNVLFLIWLVSDFFRLPDMVRKLNVSVGVGDITYLYADDVMECGESLSNAE TALYVAFGLEVLSAVSGYIKNADKAGALQGIGIILVICLAVGLYFLARAIRSTDLLSNAA IAGVFSTISALIIVFIGFGLFKPSVFALCVSCVCMLVYLIYRLLISKELYDCSGEKDYLR AFYVIATTEMITLVLAILGSQLLVLVSTIGQVVAAVLNISAVYATKGVTASKGGYNLANL AYHVRQMNRREF >gi|257441372|gb|ACYG01000030.1| GENE 130 147017 - 147460 393 147 aa, chain + ## HITS:1 COG:ECs3986 KEGG:ns NR:ns ## COG: ECs3986 COG3152 # Protein_GI_number: 15833240 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 11 146 7 113 118 91 39.0 6e-19 MTFMESVQTCVKQKYAAFSGRASRSEYWWFFLFTVLGGIVLSLIDGVLGTTIGYNQIIAG KIVHQEIGIIDALFQLAMLVPAIAVSVRRLHDTDRSGWFFLLILTPIVGAFFGDIGLLVS FVGWIVLLVFFVQRGDSGSNRFGYDPL >gi|257441372|gb|ACYG01000030.1| GENE 131 147678 - 148190 871 170 aa, chain + ## HITS:1 COG:VCA0908 KEGG:ns NR:ns ## COG: VCA0908 COG3721 # Protein_GI_number: 15601662 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme iron utilization protein # Organism: Vibrio cholerae # 1 167 30 188 193 112 35.0 5e-25 MKERIEALFAQNPKISIAQICKELGAKEIDVLLNLPERFGKSAGGDKFGEVIRELESWGE VLFVKNTPSFIIEFKTKIPSGKSAQGYYNFGMGANGDEAHGLGILGGHLKTDEIDKIILV TQTFMGMLSKFVGFYDKAGENIFKIYVSRDEKGQLLAEQDAKFEALKAAI >gi|257441372|gb|ACYG01000030.1| GENE 132 149354 - 149830 414 158 aa, chain + ## HITS:1 COG:Cj0865 KEGG:ns NR:ns ## COG: Cj0865 COG1495 # Protein_GI_number: 15792203 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Campylobacter jejuni # 1 150 49 220 266 73 29.0 2e-13 MSPTQTSALVRLGFAVAGVGALIGLLLPFSFITRLIAYALGFAGAIYGYLQSSAPHPAAD TANCLAAPAFPFAAPLDSLLPELFRPASCTGTPSFPAGTALSEVQSFFGGFYGEGFYLVP NIKFADAAQCAQVAFAAFAVVLVVMFVGFLYGRFTRSF >gi|257441372|gb|ACYG01000030.1| GENE 133 149851 - 150459 869 202 aa, chain + ## HITS:1 COG:Cj0265c KEGG:ns NR:ns ## COG: Cj0265c COG3005 # Protein_GI_number: 15791636 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Campylobacter jejuni # 27 199 17 191 191 130 38.0 2e-30 MKFLNSIAAAAALTAAIASYAGAEVKAGETLYGTALKQVSVSGDLSHKDGRLLPTNAIEV LEVKDGVVKFSLTGYQNPKAPNVIYFTPKARIIAVAFSKQAKFQSESLGEEDGFNKVKIT AYTDEGALSGDVDKIFAGAKEKFEASCSVCHALHQPASYEANRWPGYIKSMLSRTPISKD ESWTVVQYLQKHSKDVNLKDMK >gi|257441372|gb|ACYG01000030.1| GENE 134 150456 - 152972 2983 838 aa, chain + ## HITS:1 COG:Cj0264c KEGG:ns NR:ns ## COG: Cj0264c COG0243 # Protein_GI_number: 15791635 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 1 837 2 837 838 1116 63.0 0 MKRRNFLKLGAAVSALPLIPSSMLAADKLTALKKNGEILTAARWGILKASVKNGKIVKSA PWKIISKIPNTLQNTMADLVYNTRIKAPMVRKSYLADPDNPKPELRGLDEWVEVKYEDAI KLVARELKKTREQKGADSVFAGSYGWQSTGNVHVSRTLLHRFMNLTGGFTGVTGDYSTGA AQVIMPHVTGSNQVYEQQTSWPVVLENSKVVVFWGLNPISTLRVAWTSSDEQGFKYFEQL KNSDKEIIIIDPIKTVSGKYFEGKARWIAPRPNTDVAMMLGMAQHLYSQGKYDKEFLQNY TVGFEKFVPYLTGQSDGAAKTPEWASEICGISADVIKELAIKFYENRTMIMAGWGIQRAH HGEQAHWMIVTLCAMLGQIGLAGGGFGFSYHYANGGAPTCAGGVIGGMNAASVGIVKDGK FLGLAQDQKQGGEAAQAWLVNTAKVAFPLARIADALLNPGKTIDANGAKITYPKIDFIYW VGGNPIVHHQDTNTNIKAWRKPRTIVVNEIYWTPTAKMADIVFPTTTQYERNDITMSGDY SNMHIIPMKQVVAKQHGAKDDYQIFTDLCKAYADGLAEVYTDGGKTEMDWIKEFYKGAAG AVNANTALGIQMPSFEQWWEKNEPTEFYETPESAAYVSFEDFRNDPVLEALGTPSGLIEI YSDTIEAMNYKDCGAHPMWFEPVEWLGMKDKPAKFHLLSLHPLDRLHSQQSNTSNRKRYA IADREPVLINTEDAKELGIKQGDLVRVYNARGEILAGANVSDDIMRGVVQIFEGAWYDPN AEGLCKNGNPNVLTIDLPTSELANGNIAHTALVDIELYKHKAGEDIKLTAFMPPKGAK >gi|257441372|gb|ACYG01000030.1| GENE 135 153360 - 154172 594 270 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0601 NR:ns ## KEGG: CHAB381_0601 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 270 17 291 291 259 52.0 1e-67 MRDYDKEPLIINDYTVYHVFSWSIFTCILGFSLLAYDLITTGTTGKFSAFGIVSLIFVTY SFIRLRISAEQNFSKNPSYFYFSNSLIRYVENIDMKDSIISETKIAPDPSANISSVHFCV VCELENSYGRFHYLSSYELYRYSSIGVHIGKLALYIKHLMLYLIFALPYKIYKLKKSSEP LWLLKRNFVIKFNNRNYFLINAVSTKEYYELLQYFKALNVKIEDRTNFIPQAQNSGYFTD KNEIYSDDFSDTQIPKKNFKWKLRRFFSLD >gi|257441372|gb|ACYG01000030.1| GENE 136 154362 - 155675 1424 437 aa, chain - ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 2 417 4 418 438 423 54.0 1e-118 MTKHKFSSRWAFIIACVGSAVGMANVWGFPYKLGTNGGGAFLLIYVFFVALFSYVGLSAE YAIGRRAKTGTLGSYEYAWKSRGLGAIGKVIGWLPLAGSMCIAVGYAVIIAYVLKALVQA IDGSLMSENTDTWFNSFALTPYSVVPYHCIIVAGTLLTLFFGAKSIEKTNKIMMPLFFVL FAILAVRVATLQGAAGGYAFLFGADFTKLADPMVWISAMGQAFFSLSITGSGMIVYGAYL SKDEDVVSAAKNTALFDTLAAMVAALVMIPAVFAYGMDPAAGPKLLFVTLPKILQDMAGG RIFAVILFTAVIFGGISSLQNMFEVVAESLMHKFPRLSRAFTLALLCAICLGAGLGMEAI SSWGPWMDFVSIYIIPIGAVIGAISWFWVIKRNEILDEINLGAERIRGKLWYDIGRFVYV PLALLLCIIALSMHISF >gi|257441372|gb|ACYG01000030.1| GENE 137 156318 - 157655 1367 445 aa, chain - ## HITS:1 COG:Cj0183 KEGG:ns NR:ns ## COG: Cj0183 COG1253 # Protein_GI_number: 15791570 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Campylobacter jejuni # 2 430 18 446 452 524 62.0 1e-148 MDTDSSVLMLVLAFVFIFMNAFFVLSEFSIVKIRKSRLEELIKDKIPNAKLAFKISNSLD TYLSATQLGITISSLALGWIGEPAVSRLIELPLRSISIGSGAAAHTIAFVISFTLVTLFH VVLGELVPKSIAIAKTEKIVLFISRPLHIFWIMFFPIIKAFDFIAAVSLKIIGVKPAKES ELALSDEEIKIIASESLKGGVLDSLETEIIKNAVDFSDTVAKEIMTPRRDLVCLNKQKSY DENYATVLQSKFTRFPYIDGSKDNVLGLIHIRDIIQQKGDKSFDKIVRKLIIVPENSPIS KILPMMNKQRIFAALVIDEYGGTAGFLTMEDIIEEIFGDINDEHDANAQNFKRIDENTFE FRGRFEIEGVEEVMGIDFDEETEQLTIGGYVFNLFGSLPEIGDKISDENCDYEVLRMDGT RVSLVKAIKKAVAQPQENEEAEKNN >gi|257441372|gb|ACYG01000030.1| GENE 138 157675 - 157854 86 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461179|ref|ZP_05626277.1| ## NR: gi|257461179|ref|ZP_05626277.1| hypothetical protein CAMGR0001_0312 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0312 [Campylobacter gracilis RM3268] # 15 59 15 59 59 88 100.0 1e-16 MGLRAALGLSAAALEFCRDKDLPQREILNYRRILRTGARHFPHLLDFKAFLDIIINIYF >gi|257441372|gb|ACYG01000030.1| GENE 139 157937 - 158746 945 269 aa, chain - ## HITS:1 COG:PA4632 KEGG:ns NR:ns ## COG: PA4632 COG0501 # Protein_GI_number: 15599828 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Pseudomonas aeruginosa # 21 269 23 273 273 234 48.0 2e-61 MKKLALLISFAAMMIFTGCASTTQGGAVGIDRSQFITVSEAEMDQSAALAYKQITAQANA KHVLNTDKKLTDRVRGISKRLIAQVGAFRKDALKWNWQVNVINDPTINAWCMPGGRIVVY TGIIEKLKLTDAELAAILGHEMSHALREHSRERASTEQMKDVGIAVASSAAGLGDLGSAA LNMAAQYTFTLPFSRTHETEADLMGVELMARAGYDPRAAINVWEKMNKLNESHPLKFMST HPSNDDRIADLKEVMPKVLPLYEAATRNR >gi|257441372|gb|ACYG01000030.1| GENE 140 159875 - 161134 1565 419 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0038 NR:ns ## KEGG: CHAB381_0038 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 19 413 16 402 403 198 35.0 4e-49 MKEKLIEKLGADLAQIRGEELAACVQNLAFEQSLQALRGLSEDAKSAKSAELILSFAAEL NEIGALKDASSEALIEGVKKALCDEDEQGLYKLIYDYDDLRKKIACKQKAIKTLVLRSYD DLDTALQNASETELKERIGSALQRAIASKLPLADVLKEASELAFISVLESGTDIEDTAHE TAKNIAFSAIGDGEFTKFRTKEISKIIINRAIFVANESKNTASALIRGAILGCYDGINKA AERYRDELSFSPASDAQSLEDKKLQITQMSELFSAVLSDAVASSEEPAKSEIAKIADEEF GGYLAKFRKISSDLAEQLSAKIGEIELGERAKKASAKAREITQELSQKSAKIIENLDLDE KLDAIKKELSEFEKKMSQKFAELKSSDVAKNVSERAREMSAKAYEAAKETIAKLKSKKD >gi|257441372|gb|ACYG01000030.1| GENE 141 161143 - 161403 150 86 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0037 NR:ns ## KEGG: CHAB381_0037 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 86 1 88 88 84 51.0 2e-15 MACILGAEKPKIDYPLFWEYKVVLDATTQKREQIDEILKGENYKIDFSRFSNGGKYMSFN VSVFVNSDTHRNEIFERLKARFKYIL >gi|257441372|gb|ACYG01000030.1| GENE 142 161381 - 161851 717 156 aa, chain - ## HITS:1 COG:Cj0252 KEGG:ns NR:ns ## COG: Cj0252 COG0315 # Protein_GI_number: 15791623 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Campylobacter jejuni # 2 155 3 156 157 197 69.0 6e-51 MLTHIDENNMPRMVDVGAKDESERVATASGIIRMSAEAFAAVKQNTAKKGPVLQTAVIAA IMGAKKTSELIPMTHPLTITSIKTDIEELTSECAFKLFVTVKITGKTGVEMEALTGVSVG LLTIYDMLKAIDKSMQITGIVLQRKEGGKSGVYIRG >gi|257441372|gb|ACYG01000030.1| GENE 143 162462 - 162908 585 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461187|ref|ZP_05626285.1| ## NR: gi|257461187|ref|ZP_05626285.1| hypothetical protein CAMGR0001_0320 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0320 [Campylobacter gracilis RM3268] # 1 148 1 148 148 196 100.0 7e-49 MDINGLVNMVSALKSDDKNLREFQSGPVAFIEKFLGVDLPDDQINAIIAGISSNFLSKNE SGGSSSLGSMLGGLLGGGEDVQANAVDSKGVDFSALIGKIASAKLDLNGDGKIDINDASS FLGDLLGGGANGEDKGLSLGSLLKTFKI >gi|257441372|gb|ACYG01000030.1| GENE 144 162909 - 163271 677 120 aa, chain - ## HITS:1 COG:no KEGG:ELI_4348 NR:ns ## KEGG: ELI_4348 # Name: not_defined # Def: protein YegP # Organism: E.limosum # Pathway: not_defined # 1 117 1 119 124 89 47.0 3e-17 MAEFLIKDAKDGCKFDLLYDGHVLCTSEVYTSKAACKNGIESVAKNAALNKIEDQIAGGE KLNNPKFELYTDKADKVRFRLTASNGQIIAVSKDFEAKADALKVIELIVKQAAKAKIKEA >gi|257441372|gb|ACYG01000030.1| GENE 145 163388 - 163867 477 159 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0035 NR:ns ## KEGG: CHAB381_0035 # Name: not_defined # Def: putative periplasmic protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 33 143 28 135 137 71 34.0 1e-11 MIKALRFSLIFAATLGFGADESDALFKDIRTRLGCNLAAQDCETNAGGQKALFSVARHPI EAGANELKISGISRELKNPSVKISGVSMNMGNAEFPLKRSADGYEATLDVAVCTHAVMRY KLEIYEDGEPSGLFVYFDLRKRATDRDRGEDAHSHHHEH >gi|257441372|gb|ACYG01000030.1| GENE 146 164301 - 165143 1040 280 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_20127 NR:ns ## KEGG: EUBELI_20127 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 2 275 13 287 290 316 53.0 6e-85 MQILKQKHFSGERALFGAKDLRIENSVFGEGESPLKHSANIVAQNCKFEWKYPFWYAENI RAQDCFFDEIARAGIWYSRGVVLKDCLYGAPKGLRRVKDAALQNVEFHDAQETLWHCSDV TLKNVTAKGAYFGLDCENLSIENLSLFGDYCFDGCINVTIKNSKLLSKDAFWNCENILIE DCFIAGEYFGWNSKNVTLRNCKIESLQGFCYMQNLHLQDCELINTTLAFEYSDVRAEVKG AIDSVKNPSSGLIRAASIGELILDGATDASKTEIITELRA >gi|257441372|gb|ACYG01000030.1| GENE 147 165145 - 166338 1350 397 aa, chain + ## HITS:1 COG:BS_patB KEGG:ns NR:ns ## COG: BS_patB COG1168 # Protein_GI_number: 16080196 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Bacillus subtilis # 14 392 2 386 387 339 43.0 5e-93 MGLFDFISGKEKYDFDTLPNRRGTKSLKWDVGENELPMWVADMDFAVAPEIIEALQKRLN ERVLGYSIIDDEWRSAYQGWWLARHDYEIQKEWLIYAGGTLPAIDSIIRKLTSPAENVLL MSPVYNCFYYCIKNAARVPMENELAYANGDYSINWEDLQAKLADPQTTLFILCNPHNPVG RTFSRDDLARIGELCEKHGVTVLSDEVHCDLTEPGVRYTPFAAASKSCERISASIIAPTK AFNIAGLQSAAVFAADKRLRHKISKALNSDDIAEPNFFGVQGAIAAFTKGAPWLDALREY LSENRKFATEFIARELPQVHVVPQDATYLMWLDAGAYTQDSAELARFIREKTGLYLSCGA QYGKGGEKFLRLNIATSRALLKDGLGRLKEALKICPH >gi|257441372|gb|ACYG01000030.1| GENE 148 166539 - 167924 1561 461 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0635 NR:ns ## KEGG: CCV52592_0635 # Name: hypE # Def: hydrogenase expression/formation protein # Organism: C.curvus # Pathway: not_defined # 176 459 83 365 367 268 46.0 4e-70 MDRNGDSQKLYLLEKRREKLSRISKLISFLIILLLLGLYVLLNTRAEPVSFDTNWLIVAL FIIFPVLNGLLYRLFCGLSSSKNEGAQRANFDKFSGFDTAQDRGALGQGAAQTEQIFSVD AKEGQVLKAEAGEDSGSKDSDSRTSSTYGRFESKVAEGEGGGKESGVAGSKFNFLADLQS LEDERAALQKAVKKAGLIAAVVGTSVGALVARFWDEVAASVFFGISVYGVVSALLTASKR RNFRSNFKNRVVASIAKSFGLSYDENGGLGTDEFFEIYDCYINEQSSEDMMSGEVQGVRV SFSDFYAAEKVRTKNGTRTDVKFQGVLFVADFHKRLNCEVRVCHKNSRNLRRYGQRANMD DVKFEEFFDVYTTDQVGARYALTPLLMQRLTEVYLRLGSQINAVLREDKIYVAIETWRDN FEPRIDCSLKQDATIALYVDEIGALVGIVSELNLNRKIWSE >gi|257441372|gb|ACYG01000030.1| GENE 149 168169 - 168735 470 188 aa, chain - ## HITS:1 COG:no KEGG:Sph21_0071 NR:ns ## KEGG: Sph21_0071 # Name: not_defined # Def: hypothetical protein # Organism: Sphingobacterium_21 # Pathway: not_defined # 14 188 47 237 464 75 29.0 1e-12 MFAGKWFFINTNIDIAFYLRDDGTYASRLEKPDWRTRIDGKQSAYSCEDADCEFLWSDGG YHLFKAQILNEVPRGSYSFTSASSMSVYNASGGLDVVGGGASGYYDFDGKGRFKDGSSSY SSVSTSAGGGGGTSSSSSAGSYTLDAGELTLRYDDGRTQRHSFFYIPPTSEGKAGGAVVD GVIYFLDE >gi|257441372|gb|ACYG01000030.1| GENE 150 168989 - 169315 342 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461196|ref|ZP_05626294.1| ## NR: gi|257461196|ref|ZP_05626294.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 108 1 108 108 191 100.0 1e-47 MVKFKIFAACAFAGICGLNLNASELQGKWSIISADVNGQSMQTTGQKCLEDSFFEINGDV AKFTLSNASGDSCKSGKQSYGYKSLGGGRYALIASGEFRRLVQDGRGK >gi|257441372|gb|ACYG01000030.1| GENE 151 169408 - 170922 1496 504 aa, chain - ## HITS:1 COG:no KEGG:Sph21_0071 NR:ns ## KEGG: Sph21_0071 # Name: not_defined # Def: hypothetical protein # Organism: Sphingobacterium_21 # Pathway: not_defined # 315 503 51 233 464 85 30.0 4e-15 MTGFANKAKFKIFAVCVCIGFSGLSLSASELEGRWSIVSVTAQGQTFKTARQKCLEGSFI EASGDSARLSLSSANGNSCEKAEHDFALKSLGGGRYSLGGGELRLNNGSLEYKQGADGDE IVFTFKKDEVNLAGIVNGAVNQAGLDGSNLSGIEGRWELVSLKAQGQSFKVAGQKCFSDS FFEISGDEATVGIVGVNPDGSCNKSAGKSGYESLGGGKYALSAKGLGEFWLRDGMLEYKQ VADGQEILFVFKKSAAQAGYSANSAQTKSSSNLSKPAKDPSVKHSSAGASKKGSGVFGGT KFNMLLNTSEDYSFYLRDDGTYASRLEKPDWRTRIDGTYKVKDGILTITSNDDYDTSYYC ENDDCTFLWNSIGTGYYMFQAQISSQMPKDCFSFRKASSSSLHGWSGGSDTVSVGVSGYY CFDGKGRFNSGGSSYATATSGTAGGGIGGGSSKSRSDEGSYTLDQGELTLKYDDGTVVRH SFFYTSPRSKDNKAMAIIDGEVYR >gi|257441372|gb|ACYG01000030.1| GENE 152 171215 - 171406 57 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|223039188|ref|ZP_03609478.1| ## NR: gi|223039188|ref|ZP_03609478.1| conserved hypothetical protein [Campylobacter rectus RM3267] conserved hypothetical protein [Campylobacter rectus RM3267] # 5 63 255 313 313 105 93.0 2e-21 MAERGDDDEKYEILATLKYENFIQNLPKDEYEFIDAKNIVVSAFSKAEFDALIAKCGEEG LAD >gi|257441372|gb|ACYG01000030.1| GENE 153 171387 - 171722 262 111 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0751 NR:ns ## KEGG: CCV52592_0751 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 11 110 159 257 311 94 46.0 2e-18 MQKEAQISTIYGKRNEVSFDQKIIARILGTKDPAGEFSKFVTDIQNLDAYFANQMFYRGN DSGEIIGQYVLSQGVVTTLPFEPSVEYKNLQMLGDEKVARWSVAIFGGEGR >gi|257441372|gb|ACYG01000030.1| GENE 154 171870 - 172097 325 75 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0751 NR:ns ## KEGG: CCV52592_0751 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 75 20 96 311 89 54.0 6e-17 MSVEEALRLVPNLSQFNADEDDEEFDAEGFYGAKLDELDCLVAGTDGLSGRGFEIGYEDG TYNIRVSTPSTHADW >gi|257441372|gb|ACYG01000030.1| GENE 155 172213 - 173073 1094 286 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 1 286 1 279 279 347 64.0 2e-95 MKKTLSTLFILGALFFAGCNDEGKGSSNSAQGSAAPQSYIDGIKKRGVVRIAVFGDKPPF GYIDETGKNAGYDVYFAKRIAKELLGDESKVQFVLVEAANRAEFLASDKVDITLANFTVT PERKEVVDFALPYMKVALGVASKDGDITDVSQLKDKTLLINKGTTADLYFTKNHPEIKLL KFDQNTETFGAMLDGRGDAIAHDNTLLFAWTKSNPGFKVGIRSLGDQDVIAPAVKKGNDE LRKWLDDLIVKLADEKFFHADYDATLAPVYGDDIKADDVVIEGGKL >gi|257441372|gb|ACYG01000030.1| GENE 156 173094 - 173831 552 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 239 1 240 245 217 46 4e-55 MGILELHKINKFYGELHALKDVSLSVAQGEVVVILGPSGCGKSTLLRTINGLEPVQSGNF IIEGERIDQNFKEWRRIRQKIGMVFQSYELFDHLSVLHNIILGPMKVQNVPKEEAITLAR EWLKIVGLADKENSYPKELSGGQKQRIAIVRSLVMKPKIMLFDEVTAALDPEIVREVLDV MLNLAKEGQTMLIVTHEMGFARAVADRIIFMDDGHIVEINEPEAFFTAPKSERAKKFLNM FEFKK >gi|257441372|gb|ACYG01000030.1| GENE 157 173831 - 174487 805 218 aa, chain - ## HITS:1 COG:Cj0468 KEGG:ns NR:ns ## COG: Cj0468 COG0765 # Protein_GI_number: 15791832 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Campylobacter jejuni # 1 218 2 218 218 214 55.0 9e-56 MELLSGENLIRLLEGLGVTLQIALISIAVSLALGLVLGILMASGRRALYIPLKICLEIVR IMPPIVWLFIVYFGASKAFGIHISNIAASIIVFSVWGVFEMMDLVRGAVLSIPKHQFESA EALAFSRSQIYLYVILPLAMRRLVPATINLFSRMIKTTSIAVLIGVIELVKVGQQIIEVN VFRDNYAPLIIYGAIFFVYFLICYPISALSKKLENRWS >gi|257441372|gb|ACYG01000030.1| GENE 158 174490 - 175143 621 217 aa, chain - ## HITS:1 COG:Cj0467 KEGG:ns NR:ns ## COG: Cj0467 COG0765 # Protein_GI_number: 15791831 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Campylobacter jejuni # 1 214 1 232 233 196 53.0 3e-50 MDFDFIAKFSPMFVKAGVLTLKLAFYGILLSIIIGFICTLIKYKRLPLLSPLVSAYIELS RNTPLLIQLFFLYYGLPKLGVQISGFTCAIVGLAFLGGSYMSESFRLGFEAIKKSQIESA MSLGLSEAQIVFYVVLPRAFAIALPSISANIIFLLKETSIVSIVALADLVYAAKDVIGLY YKTNEALFMLSVSYLIIILPLSLALTLLEKRLAYMRG >gi|257441372|gb|ACYG01000030.1| GENE 159 175310 - 176782 1387 490 aa, chain - ## HITS:1 COG:NMB0792 KEGG:ns NR:ns ## COG: NMB0792 COG0471 # Protein_GI_number: 15676690 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 38 486 28 467 471 440 56.0 1e-123 MEEHKVELRNSRLQGPLDSDVDELGLDRLTDTVPFPKRGVIIMAIAAAVGFALYAALPFE PNVKKGLALLAFIAIMWLTEAVHITVTALMVPVLAVAIGLGKFAKDGTFTAATIKSTLAN FANPTIFTFFGGFALATALHMQKLDKKIAMWLIARAGGRLGVAAILICLATAILSMWVSN TATAAMMLPIALGICANMDESKDRGTLVFLLLGIAYSASIGGLGTLVGSPPNLIVAQALH YSFADWMKVGLPLMCVMLPIMLVVLYIIFKPNLSHKIEMDLEHIPWTRERIITIVVFALT ALGWIFSKQISALVGFKVDDAYVAICSAVVIVILGLAKWHDIAENTEWGVLLLFGGGLTL SAVLGDSGASKVLGDLVAHTFGGAPTYIVLLVTAVFIICLTEFTSNTASAALLVPVFAGV AAQMGLPKETLTIVIGVGASCAFIMPVATPPNALVFGTGRIRQAEMVRSGGILAIFSAFL VSGYAYIFYS >gi|257441372|gb|ACYG01000030.1| GENE 160 177300 - 177929 633 209 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0601 NR:ns ## KEGG: CCC13826_0601 # Name: not_defined # Def: putative outer membrane protein # Organism: C.concisus # Pathway: not_defined # 1 209 1 199 199 142 44.0 6e-33 MKNKILIAAFAAAACVSVGSSEGLLLGIEGDYSFKSSLTAKWSEDGDSGTVKDHKGQAAI GFKAGYDFGIARAYGEYMYDFKVTKNGSDEDGDFKHSWNKHSLLVGGDFTPEITNSFRLV AGAYTGVSFLKYKDSYNDFSGDSDSISKTVPGWVIGARLGGLYSFDEHNEIEFGYKADYT RYKASKLGEDIDKAYETNHGLYLGYNFKF >gi|257441372|gb|ACYG01000030.1| GENE 161 178740 - 180071 1338 443 aa, chain - ## HITS:1 COG:Cj0023 KEGG:ns NR:ns ## COG: Cj0023 COG0015 # Protein_GI_number: 15791422 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Campylobacter jejuni # 1 441 1 441 442 723 80.0 0 MVERYARKEMSEKWSLQAKYDAWLKVELAAVKAWNKLGLISDCDKDKILQNASFRIERID EIEKTTKHDVIAFLTSVSESLGQESRFVHYGMTSSDCIDTAVALQIKESMELIIEDVQNL KAAIKSQAMKHKMTLMVGRSHGIHGEPITFGLVLAVWYDEINRALELLQHAKSVISYGKI SGAMGNFAHAPLELEELVCEYLGLKPAPASNQVIQRDRYAQVMSALAILASSCEKIAIAI RHYQRTEVYEAEEFFSPGQKGSSAMPHKRNPVLSENVTGLCRMIRSFVIPAMEDVALWHE RDISHSSVERFILPDGFITADFMLNRLTSLIEKLLVYPENMMRNLNLTGGLVFSQRVLLE LPKRGVSREDAYKIVQRNAMKVWADLQEGKKAIDEQGHSLFLQNLLADTKLREKLSESEI KECFDYRYYTKNVDAIFARVFGK >gi|257441372|gb|ACYG01000030.1| GENE 162 180147 - 181559 1108 470 aa, chain + ## HITS:1 COG:Cj0022c KEGG:ns NR:ns ## COG: Cj0022c COG0564 # Protein_GI_number: 15791421 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Campylobacter jejuni # 1 161 1 161 300 136 43.0 8e-32 MGYEKRSLGSFEGRKIYEILLSLGYDMKSAQRICDKRRVTDAEDQNLHKNSVACGEIFLI DYKCEPRGLKPIFECDAFAAFDKPSGILSHPSGRNSPYNMYDEIWSLYGQDACVAHRLDL ETSGILIVAKDKDAARELKECFEQRRVMKSYLALVQGDLREGLRGDLQSAACNGEIESCY ALGFDEICGSKFAGDAVSLPSSVSDLRDTLALKGTGNKFGFNILSNGASRGLWCDALSYD AQVKFNSGAPTGDVDSRSEFDDLSCGVSDKLKPAITMSSADNGHKPCALSAAKSLPATSK GCVNLKKFEPAKYAKFSEKLKFLKDFEGFVIDAPIAPSGEFADLKIRMKISRDSKEAITL IRPLRYFSDIDASLIECYPLTGRQHQIRLHLFAAGAPILGEPLYGLSREQAERILDKKMD ETERVRTTGAPRLLLHANAICFELGGERYEIKSKFDAAREFYNLAKIGKI >gi|257441372|gb|ACYG01000030.1| GENE 163 181849 - 182169 326 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461211|ref|ZP_05626309.1| ## NR: gi|257461211|ref|ZP_05626309.1| hypothetical protein CAMGR0001_0344 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_0344 [Campylobacter gracilis RM3268] # 1 106 1 106 106 183 100.0 4e-45 MLQDKLGGSIKDFKSGVDSFKKYNQEHGIFKKEFDEYANFLFKQKGGAGSSVNLESSALI ASMGSKTVVASFGEYCKRMLGLGIDRSIEQKQTIEISQDIGMRLGL >gi|257441372|gb|ACYG01000030.1| GENE 164 182382 - 183467 752 361 aa, chain - ## HITS:1 COG:Cj1713 KEGG:ns NR:ns ## COG: Cj1713 COG0820 # Protein_GI_number: 15793016 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Campylobacter jejuni # 2 344 13 355 356 491 70.0 1e-139 MKELENFVEPKFRAKQIYEWIYKKNVDDFAQMLNLPKEIRQSLAQNFYLDPLKCVRSETS SDGSIKYLFALKDGKTIESVLLPMKDELRDENEKIIRHARYSICVSSQVGCKIGCSFCLT AKGGFVRNLTPGEIVAQIWLIKKMNAIPYERRVNVVYMGMGEPLNNLDNVAKAVQILKEN DGLAIAPRRQTISTSGLSTQIKKLGEMDLGVLLAISLHAVDDELREKLMPINRAYNIASI MQAVREFPIDLRKRVMFEYLMIDGVNDRPSDAKTLVKLLHGIRAKVNLIYFNPHEGSSFG RPSPENMIKFQDYLCAHGITCTIRQSKGLDISAACGQLKQRNEQGKILAQSSISADKISN K >gi|257441372|gb|ACYG01000030.1| GENE 165 183488 - 184033 303 181 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1891 NR:ns ## KEGG: CCC13826_1891 # Name: bcp # Def: bacterioferritin comigratory protein Bcp # Organism: C.concisus # Pathway: not_defined # 1 176 2 223 226 210 56.0 2e-53 MIISAGRNEIFDFALPMGVGLVDMSINLTKFLCENRQSLPSEIIFVGSAGLYKEGEILKI YESRSAANCEISALYELSYSPISFEIAARNSADVSYETITNSSNFITTDKKSALKFFERG YFLENMEFFSVLKVAQKFQIPASGIFCATNFCDSNAHADFLKNHAAAKENLTKYLKTKAL I >gi|257441372|gb|ACYG01000030.1| GENE 166 184386 - 185306 1001 306 aa, chain - ## HITS:1 COG:AF0819 KEGG:ns NR:ns ## COG: AF0819 COG0107 # Protein_GI_number: 11498425 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Archaeoglobus fulgidus # 4 306 2 271 271 290 52.0 2e-78 MNRFAKRIIPCLDVKDGRVVKGVNFVGLVDAGDPVEIAKRYNEEGADELCFLDITASHLG RDTIVDVVERVARELFIPLTVGGGIRTIDDISRLLNVGCDKISLNSAAIKNPNLIDEAAN KFGSQCVVIAIDAKRNSIEISRGDLYGEARNSNGDLHGGMRNPDTNLGSEARNFGEILRG AQDEILTGNGELCGYSVFINGGRLDTGRDALAWAKEAQERGAGEILLTSMDCDGVKNGFE LNLTRIFSALDIPVIASGGAGKMEHFKDAFLAGADACLAASIFHFREIEIKALKAYLQEQ GIEVRL >gi|257441372|gb|ACYG01000030.1| GENE 167 185398 - 186261 413 287 aa, chain + ## HITS:1 COG:Cj1711c KEGG:ns NR:ns ## COG: Cj1711c COG0030 # Protein_GI_number: 15793014 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Campylobacter jejuni # 1 287 1 264 266 227 43.0 2e-59 MIRAKKEFGQNFLKDEAVLSKIIQAIPGSVQNVVEIGAGLGDLTRKLLEFYRLKSFEIDE DLYQILSAKFAQQIASGELELVLGDALRIWQERRGLERGEYFLVANLPYYVATKMILQAI DDELCGGFLVMIQKEVALKFCARAGQSDFSALSILADLAGGCELLFDVEPDCFEPAPKVT SSVIRLIKGKNFKPGIEINADGLGVKSCARFQNLDEYEKFKSFLRVSFSAPRKTLIKNLS AKFDRGLVEEISLNLQIPPTVRAHELNSTFFLEIFKNLRVKDGRKQK >gi|257441372|gb|ACYG01000030.1| GENE 168 186242 - 188467 2573 741 aa, chain + ## HITS:1 COG:Cj1710c KEGG:ns NR:ns ## COG: Cj1710c COG0595 # Protein_GI_number: 15793013 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Campylobacter jejuni # 113 741 35 664 664 919 72.0 0 MEENRNENGVERLKKSNRYKKRKENLKKSIASEGSAGGAEFSGEHENGSHKNKGAKNGQN SARSKGSKNGSRNGSNSAGGSSNGNSNGASGAHFGGAYPKSNENGAGGNGANLNGAVKPN GNNAKSANSSAADDASSADMQKKKKHKKRSNMPKSLTGNEPWQKAMEEAIAENKLIHEER LHPLKDANRSDETVRITPLGGLGEIGANMTVFETNTSAIIVDVGMSFPEESMLGVDILIP DFDYVRKIKNKIKGILITHAHEDHIGAMPYFFKEFQFPIYATPLPLGMISNKFEEHGLKA ERSYFRPVQKRQLYQIGDFEVEFIHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDG YPTDLNRLAYYGDRGVMLLMSDSTNSHKEGITKSESSVGKTFDTIFSSCKGRVIMSTFSS NIHRVYQAIERGVKYGRKVCVIGRSMERNLFTAMELGYVNLDKKIFVDADQVSKYPDNEV LIVTTGSQGETMSALYRMATDEHKYIKIKSTDQVIISAKAIPGNESSVSTVLNYLLKSGA KVAYQDFSEIHVSGHASIEEQKLMLRLIKPKFFLPVHGEYNHIVKHKETAIECGIEEKNI YLMNDGDQMEVCEKYLKRVKTVKTGKVFIDNQINKQISDEIVKHRQNLADAGVAVIIAQI DKNEKRLIQTRVITYGLVAENQTAHFTKEMQGIIEQFLANLKDEILLDHWALEGKIRQAV RKHIFRKIKKYPTIVPVIYLM >gi|257441372|gb|ACYG01000030.1| GENE 169 188845 - 189807 1060 320 aa, chain + ## HITS:1 COG:Cj1443c_1 KEGG:ns NR:ns ## COG: Cj1443c_1 COG0794 # Protein_GI_number: 15792761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Campylobacter jejuni # 5 206 4 205 205 212 54.0 7e-55 MSEILDMAREVLRLEGAELLRHADLIGGEIERAVSLILACKGKVIVTGVGKSGHIGVKIA ATLASTGTPSFFVHPTEALHGDLGMIGKDDMVLAISFSGESEELVRILPHLKRFGVKIIA MARDKNSSLGKVCDEFISLSIVKEACPLGAAPTVSTTLTLGLGDALAICLMRQRRFGKED FANFHPGGSLGKRLFVKVKDVMQSKNLPVANRNASLKQAIDIMTHGKLGTVLLVNEKGAL EAILSDGDLRRALMREDFDINDGALKYATKNPKILDDKNMLAIDALNLIEQFKIQVLPVV ENGVPAGILHIHDLTSLGLK >gi|257441372|gb|ACYG01000030.1| GENE 170 189807 - 190577 898 256 aa, chain + ## HITS:1 COG:Cj1709c KEGG:ns NR:ns ## COG: Cj1709c COG1187 # Protein_GI_number: 15793012 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Campylobacter jejuni # 4 256 1 253 253 306 62.0 2e-83 MQKMRLNKFISHNTAYSRREADELIKQGKVSINGRVVSDFIEVSGEEKIRIGSRLIKPKT EFTMIVYNKRKGELVTKKDDRGRRTIYDSLPEGFSRFVSVGRLDFASEGLLLLTDAPAIA TALMNSDIEREYYLKVKGEVKEEVVTAIREGFFAADASKGAHAKSKIKSMEFKPFLGYRI MPSSGGYTKIKAIINEGQNRELRRFFGYFDLDVVELKRTAFGRMTLGMLKPGKWRYFDHS EYEDLRDFLKENKIRY >gi|257441372|gb|ACYG01000030.1| GENE 171 190593 - 191066 531 157 aa, chain + ## HITS:1 COG:lin0783 KEGG:ns NR:ns ## COG: lin0783 COG2606 # Protein_GI_number: 16799857 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 157 1 158 158 140 48.0 9e-34 MSSKTNAARVLDGLKIPYEIKEYAVDPLNLDAVHVANSVNEPIERVYKTIVCTADHEYVV ACLQGDLNLDLKALAHICGAKRCELMDLKDLQKVTGYVRGGCSPLGMKKHFRTFIDERAL TQEKIYVSAGVRGKQIALAPKDLATATEAQICKITHD >gi|257441372|gb|ACYG01000030.1| GENE 172 191429 - 191992 771 187 aa, chain - ## HITS:1 COG:SP1284 KEGG:ns NR:ns ## COG: SP1284 COG1704 # Protein_GI_number: 15901144 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 6 181 4 179 186 129 38.0 3e-30 MNAALVLLVVIVLLVLALVGAYNSFIAKRNQVRNIASTVDTQLKKRYDLIPNLVSATREY MSHENAVLTRVSELRSQAISASSNADKFRLNSEISALLGQIRVAVEAYPNLKANESFAKL QNALGECEEQISAARRAYNGAVTVYNNACEMFPTNIIANVFNFVKAEFFAASEQEKQAPN VSELFKK >gi|257441372|gb|ACYG01000030.1| GENE 173 192399 - 193211 629 270 aa, chain + ## HITS:1 COG:AF1859 KEGG:ns NR:ns ## COG: AF1859 COG5551 # Protein_GI_number: 11499443 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Archaeoglobus fulgidus # 19 267 23 287 289 65 23.0 8e-11 MLKYLELGICGTDLKPSHPFIGSAIRGAFGYALRKASCPFVSANCEKCDISGECVYNEFF ENVSDTPNFRLDINLNQKSFDFKILLFEHAVRYLPHVAIAIANMQEIGLEASRRKFKFSN FTLNGEIVEPKFLLSNEPGPLNFTPDFAAGDYEISLLTPLRMKQKNVLVRREIDLKSFIR QIAMRFENITGEAIDKFEVKFRRFEQDLRFYDINRYSNRQHTKMQFGGLLGRMRVFGLDE RSAKFLQLAQITGVGKSTVFGLGKIKVERI >gi|257441372|gb|ACYG01000030.1| GENE 174 193344 - 195539 1544 731 aa, chain + ## HITS:1 COG:SMb21167 KEGG:ns NR:ns ## COG: SMb21167 COG3344 # Protein_GI_number: 16264581 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Sinorhizobium meliloti # 6 316 46 367 453 157 31.0 5e-38 MFDLSLEDIFTAGAFEYALKRLKRTALGFDGLSADDICSGEFYAELKSEIFSLSYSPQPL KRAFIPKEAKDELRKLAVPSLKDKFVQNILTRELSGYFDKSFSNRSYAYRNGKSYANAIY RARDFFQIFSFAVKTDIKDFFENIDHEKLLEILRANIRDARIIRLIELWIKNGIFERFDY RAHTKGVHQGDVLSPLLSNIYLNQMDKFLENSGVEFVRYADDFVMFFASYEAAEMRLARL KDFLKTISLSLNEAKTSIHGKDSEFVFLGVSFKGTNLSIGEEKFKRILAKLASSAKKQAI SQSVENLNAYAYHLKAISLKLFSPSQKDRFCLHFGEVVTSLIRRFLKTADKRTLAEALIN LNFPYELGKTAKKAKILTYFKNAKRPAVKSVQNALEAKKREYLKTFSQSSIIHITTPFYF LALSQGKLVLKSKGAIKHKFPINQISQIIINAQISLSSAVIKECAKKKISINFIDEKTNL SYATLISANSAIPKTAASQISLLTTKKSLRIAQQFIIGKLKNQINYLKYLGKYHKNLGAE IKAMQEILKLRVPGAASVSELMGFEGSAANSYWQAIAKAVDYEFGFSARVTQGATDIVNS ALNYGYAILYSKILKSIAAAGLSPHVSYLHALDEQKPTLAFDLIEEFRAFIVDRAVISMV NKNEPFEIKDGLLSVATRQNIAKNVNEKLFACTQYRGEQLKAQDIIDRQAYALKRAVTQN EKYKPFIGRFQ >gi|257441372|gb|ACYG01000030.1| GENE 175 195536 - 195808 316 90 aa, chain + ## HITS:1 COG:no KEGG:Cpha266_2060 NR:ns ## KEGG: Cpha266_2060 # Name: not_defined # Def: CRISPR-associated Cas2 family protein # Organism: C.phaeobacteroides # Pathway: not_defined # 3 90 1 88 89 72 37.0 8e-12 MNLIICYDVCKTKRRNKLAALLESYGLRANYSVFELDVSERIYAELKQCIARIIEPKTDK VLFYRICKTCMAKSESLGEGEIFRSPGTYV Prediction of potential genes in microbial genomes Time: Wed Jun 29 08:00:12 2011 Seq name: gi|257441256|gb|ACYG01000031.1| Campylobacter gracilis RM3268 contig00054, whole genome shotgun sequence Length of sequence - 94354 bp Number of predicted genes - 86, with homology - 86 Number of transcription units - 37, operones - 21 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 317 - 347 1.1 1 1 Op 1 . - CDS 371 - 1417 1140 ## COG0407 Uroporphyrinogen-III decarboxylase 2 1 Op 2 1/0.333 - CDS 1420 - 1911 473 ## COG2862 Predicted membrane protein - Prom 2103 - 2162 4.4 - Term 2053 - 2090 3.9 3 2 Op 1 . - CDS 2216 - 3247 1410 ## COG0136 Aspartate-semialdehyde dehydrogenase 4 2 Op 2 1/0.333 - CDS 3240 - 5984 3366 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 5 2 Op 3 . - CDS 6023 - 6640 439 ## COG1040 Predicted amidophosphoribosyltransferases 6 2 Op 4 . - CDS 6641 - 7189 564 ## CHAB381_1214 hypothetical protein - Prom 7252 - 7311 5.2 + Prom 7196 - 7255 6.3 7 3 Tu 1 . + CDS 7282 - 9573 2150 ## COG2812 DNA polymerase III, gamma/tau subunits + Prom 10234 - 10293 4.8 8 4 Tu 1 . + CDS 10339 - 11268 1394 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 11379 - 11430 8.2 - Term 12020 - 12061 3.5 9 5 Tu 1 . - CDS 12068 - 12586 601 ## CHAB381_1131 hypothetical protein - Prom 12804 - 12863 5.7 10 6 Tu 1 . + CDS 12892 - 13635 958 ## gi|257461244|ref|ZP_05626341.1| hypothetical protein CAMGR0001_2793 + Term 13703 - 13748 -0.6 - Term 13767 - 13816 -0.1 11 7 Op 1 . - CDS 13850 - 14335 294 ## CCC13826_0483 phenylalanyl-tRNA synthetase alpha chain (phenylalanine--tRNA ligase alpha chain; PheRS) (EC:6.1.1.20) 12 7 Op 2 . - CDS 14311 - 14553 364 ## gi|257461246|ref|ZP_05626343.1| phenylalanyl-tRNA synthetase alpha chain 13 8 Tu 1 . - CDS 15171 - 16967 2349 ## COG0481 Membrane GTPase LepA - Term 17270 - 17329 13.9 14 9 Tu 1 . - CDS 17341 - 23853 4105 ## CHAB381_0739 hypothetical protein - Prom 23908 - 23967 9.5 15 10 Op 1 . - CDS 24186 - 24728 532 ## PROTEIN SUPPORTED gi|229532345|ref|ZP_04421727.1| SSU ribosomal protein S30P; sigma 54 modulation protein 16 10 Op 2 . - CDS 24744 - 25280 311 ## Sdel_0854 hypothetical protein 17 10 Op 3 . - CDS 25280 - 26353 926 ## CHAB381_0553 prepilin-type N-terminal cleavage/methylation domain-containing protein 18 10 Op 4 . - CDS 26366 - 27106 694 ## CHAB381_0552 prepilin-type N-terminal cleavage/methylation domain-containing protein + Prom 27075 - 27134 6.4 19 11 Op 1 3/0.167 + CDS 27360 - 28007 682 ## COG4105 DNA uptake lipoprotein 20 11 Op 2 . + CDS 28016 - 30532 2816 ## COG0466 ATP-dependent Lon protease, bacterial type + Term 30755 - 30806 6.5 + Prom 30815 - 30874 6.0 21 12 Op 1 . + CDS 30941 - 31111 132 ## gi|257461256|ref|ZP_05626353.1| conserved hypothetical protein 22 12 Op 2 . + CDS 31108 - 31818 588 ## CHAB381_0669 hypothetical protein 23 12 Op 3 . + CDS 31818 - 32009 163 ## gi|257461258|ref|ZP_05626355.1| protein DpnD 24 12 Op 4 . + CDS 32017 - 32838 663 ## CHAB381_1228 restriction endonuclease R.IB 25 12 Op 5 . + CDS 32831 - 33646 645 ## COG0863 DNA modification methylase + Prom 33910 - 33969 4.7 26 13 Op 1 . + CDS 34217 - 35116 957 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 27 13 Op 2 . + CDS 35130 - 35552 378 ## CCC13826_1127 hypothetical protein + Prom 36528 - 36587 7.3 28 14 Tu 1 . + CDS 36661 - 38037 1921 ## COG2610 H+/gluconate symporter and related permeases + Prom 38231 - 38290 5.4 29 15 Tu 1 . + CDS 38371 - 39507 1197 ## COG1929 Glycerate kinase - Term 41276 - 41333 18.0 30 16 Op 1 3/0.167 - CDS 41376 - 42182 801 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 31 16 Op 2 . - CDS 42204 - 42845 733 ## COG0036 Pentose-5-phosphate-3-epimerase - Prom 42917 - 42976 5.3 + Prom 42810 - 42869 5.1 32 17 Op 1 2/0.167 + CDS 42990 - 43181 265 ## PROTEIN SUPPORTED gi|154173798|ref|YP_001408511.1| 50S ribosomal protein L28 33 17 Op 2 . + CDS 43200 - 44330 942 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 34 17 Op 3 . + CDS 44323 - 45516 1049 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) + Term 45568 - 45610 3.6 + Prom 45579 - 45638 6.4 35 18 Tu 1 . + CDS 45764 - 45994 406 ## COG2841 Uncharacterized protein conserved in bacteria 36 19 Tu 1 . - CDS 46859 - 47299 560 ## CHAB381_1224 hypothetical protein - Prom 47325 - 47384 9.6 37 20 Tu 1 . - CDS 47434 - 47787 418 ## CHAB381_0515 zinc uptake regulation protein - Prom 47817 - 47876 4.8 + Prom 47821 - 47880 8.3 38 21 Op 1 . + CDS 47901 - 48827 890 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 39 21 Op 2 . + CDS 48831 - 50984 1402 ## CHAB381_1499 transporter, Ni2+-Co2+ transporter + Term 51186 - 51219 -0.9 + Prom 51145 - 51204 4.8 40 22 Tu 1 . + CDS 51226 - 52176 855 ## CHAB381_0874 hypothetical protein - Term 52719 - 52763 6.2 41 23 Op 1 . - CDS 52776 - 54353 1838 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 42 23 Op 2 4/0.000 - CDS 54408 - 56075 2070 ## PROTEIN SUPPORTED gi|154147885|ref|YP_001406069.1| 30S ribosomal protein S1 - Prom 56120 - 56179 4.7 43 23 Op 3 3/0.167 - CDS 56188 - 57024 539 ## PROTEIN SUPPORTED gi|168184863|ref|ZP_02619527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog 44 23 Op 4 3/0.167 - CDS 57014 - 58288 1361 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 45 23 Op 5 40/0.000 - CDS 58285 - 60615 2414 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 46 23 Op 6 . - CDS 60612 - 61607 1211 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 61748 - 61807 6.1 + Prom 61650 - 61709 5.7 47 24 Tu 1 . + CDS 61737 - 62093 510 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases + Term 62120 - 62173 3.3 - Term 62576 - 62614 -0.9 48 25 Tu 1 . - CDS 62637 - 63080 688 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 63102 - 63161 9.6 + Prom 63085 - 63144 9.1 49 26 Op 1 7/0.000 + CDS 63263 - 64165 1116 ## COG0739 Membrane proteins related to metalloendopeptidases 50 26 Op 2 . + CDS 64117 - 64533 597 ## COG1664 Integral membrane protein CcmA involved in cell shape determination + Term 64541 - 64580 -0.9 - Term 64710 - 64765 -0.6 51 27 Tu 1 . - CDS 64797 - 64991 117 ## gi|257461302|ref|ZP_05626399.1| hypothetical protein CAMGR0001_2851 - Prom 65090 - 65149 7.0 + TRNA 65447 - 65537 63.2 # Ser GCT 0 0 52 28 Tu 1 . - CDS 65589 - 66218 764 ## gi|257461303|ref|ZP_05626400.1| putative lipoprotein 53 29 Op 1 2/0.167 - CDS 66591 - 67808 1120 ## COG3581 Uncharacterized protein conserved in bacteria 54 29 Op 2 . - CDS 67808 - 70807 2797 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 70875 - 70934 6.6 55 30 Op 1 33/0.000 - CDS 71057 - 71413 525 ## PROTEIN SUPPORTED gi|154175495|ref|YP_001408552.1| 50S ribosomal protein L19 56 30 Op 2 30/0.000 - CDS 71410 - 72111 636 ## COG0336 tRNA-(guanine-N1)-methyltransferase 57 30 Op 3 12/0.000 - CDS 72108 - 72638 515 ## COG0806 RimM protein, required for 16S rRNA processing 58 30 Op 4 19/0.000 - CDS 72631 - 72873 372 ## COG1837 Predicted RNA-binding protein (contains KH domain) 59 30 Op 5 23/0.000 - CDS 72875 - 73105 328 ## PROTEIN SUPPORTED gi|223039455|ref|ZP_03609743.1| ribosomal protein S16 60 30 Op 6 1/0.333 - CDS 73184 - 74524 1376 ## COG0541 Signal recognition particle GTPase 61 30 Op 7 3/0.167 - CDS 74591 - 75340 169 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 62 30 Op 8 3/0.167 - CDS 75340 - 76728 926 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 63 30 Op 9 7/0.000 - CDS 76725 - 77432 1136 ## COG1579 Zn-ribbon protein, possibly nucleic acid-binding 64 30 Op 10 3/0.167 - CDS 77442 - 78164 685 ## COG0327 Uncharacterized conserved protein 65 30 Op 11 . - CDS 78170 - 79168 1405 ## COG0752 Glycyl-tRNA synthetase, alpha subunit - Prom 79192 - 79251 4.1 66 31 Op 1 . - CDS 79436 - 79663 268 ## CCV52592_0283 CTA2 subfamily 1 protein 67 31 Op 2 1/0.333 - CDS 79667 - 80167 819 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 68 31 Op 3 . - CDS 80164 - 81432 1309 ## COG0826 Collagenase and related proteases - Prom 81470 - 81529 6.3 + Prom 81415 - 81474 6.5 69 32 Op 1 . + CDS 81498 - 82286 1183 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Prom 82382 - 82441 5.1 70 32 Op 2 . + CDS 82480 - 83907 1909 ## COG0174 Glutamine synthetase + Term 83920 - 83975 15.4 + Prom 84027 - 84086 6.9 71 33 Op 1 . + CDS 84121 - 85290 728 ## COG0658 Predicted membrane metal-binding protein + Term 85301 - 85339 5.1 72 33 Op 2 . + CDS 85370 - 85660 393 ## COG2350 Uncharacterized protein conserved in bacteria + Prom 85728 - 85787 1.6 73 34 Op 1 . + CDS 85836 - 86609 582 ## COG1247 Sortase and related acyltransferases 74 34 Op 2 . + CDS 86625 - 87470 977 ## CCV52592_0756 hypothetical protein 75 35 Op 1 . - CDS 87732 - 88121 372 ## gi|257458973|ref|ZP_05624093.1| putative phytanoyl-CoA dioxygenase - Prom 88148 - 88207 4.6 76 35 Op 2 . - CDS 88214 - 88486 287 ## gi|257461332|ref|ZP_05626429.1| conserved hypothetical protein 77 35 Op 3 . - CDS 88508 - 88780 312 ## gi|257461333|ref|ZP_05626430.1| hypothetical protein CAMGR0001_2883 78 35 Op 4 . - CDS 88827 - 89306 473 ## CCC13826_1692 serine hydroxymethyltransferase (serine methylase; ShmT) (EC:2.1.2.1) - Prom 89494 - 89553 5.1 79 36 Op 1 . - CDS 89642 - 89959 282 ## CCC13826_1677 hypothetical protein 80 36 Op 2 . - CDS 89985 - 90296 269 ## gi|257461336|ref|ZP_05626433.1| hypothetical protein CAMGR0001_2886 81 36 Op 3 . - CDS 90391 - 91002 475 ## CJE1136 hypothetical protein 82 36 Op 4 . - CDS 91034 - 91372 286 ## gi|257461338|ref|ZP_05626435.1| hypothetical protein CAMGR0001_2888 83 36 Op 5 . - CDS 91398 - 91793 363 ## gi|257461339|ref|ZP_05626436.1| hypothetical protein CAMGR0001_2889 - Prom 91840 - 91899 6.9 84 37 Op 1 . - CDS 92233 - 93396 870 ## XBJ1_0293 hypothetical protein 85 37 Op 2 . - CDS 93471 - 93860 216 ## gi|257461342|ref|ZP_05626439.1| conserved hypothetical protein 86 37 Op 3 . - CDS 93865 - 94251 366 ## gi|257461343|ref|ZP_05626440.1| conserved hypothetical protein - Prom 94275 - 94334 5.6 Predicted protein(s) >gi|257441256|gb|ACYG01000031.1| GENE 1 371 - 1417 1140 348 aa, chain - ## HITS:1 COG:Cj1243 KEGG:ns NR:ns ## COG: Cj1243 COG0407 # Protein_GI_number: 15792567 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Campylobacter jejuni # 1 348 1 340 340 489 62.0 1e-138 MVFIDACFGKETPYTPIWMMRQAGRYLPQYMVVRERAGDFLSLCRDYRAASEVTIQPVEI LGVDAAILFSDILVVPMQMGMDLRFEAGEGPRFSDPIRSQSDLARLDPQKAAAELGYVYD TISLTRSRLAADKALIGFCGAPWTIATYMIEGGGSKNYAVCKRMLYENPQLLHEILRLVT EATKLYLAHQIGSGVDAVQIFDSWAGALEPSAYEEFGWRYILEITEFLKAKFPHIPLIVF AKGTGAQMSRLSSIAARRGEASFDVWGVDWSTPIELAREQLGGKFALQGNLEPMRLYDRG AIESGVREILVAMKGAAHIFNLGHGILPDVSVQNAKYLVDLVHELSAR >gi|257441256|gb|ACYG01000031.1| GENE 2 1420 - 1911 473 163 aa, chain - ## HITS:1 COG:Cj1022c KEGG:ns NR:ns ## COG: Cj1022c COG2862 # Protein_GI_number: 15792349 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 1 160 2 165 168 111 44.0 5e-25 MKAIFEKFLLCSKFLTLLPVLFCIAAGAAIFVMASYEICSALYKIVEFFLAPQSEGALYV DILSEIITAIDLYLVAIVLLIFVFGIYELFIDEFVDLNLQVLKIASLEELKHKLGSVIIM VLVVDFFKRILRTDFTTPLDMLLLAGAIFAVCLALYILSKFKG >gi|257441256|gb|ACYG01000031.1| GENE 3 2216 - 3247 1410 343 aa, chain - ## HITS:1 COG:Cj1023c KEGG:ns NR:ns ## COG: Cj1023c COG0136 # Protein_GI_number: 15792350 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Campylobacter jejuni # 6 340 7 341 343 510 72.0 1e-144 MSSYNIAIVGATGAVGEEILRVLDEMNFPVKDILPLASAKSAGEKVEFRGKEYVVRELTD STFDENEIDIAFFSAGGSISAHYVPFAAASGAVVIDNTSHFRMQENVPLVVPECNPQDIK LWEETGIIANPNCSTIQMVQILKPLDDAFDIERVDVSTYQAASGAGKEGMEELVFQLQKF FEFKLDECKPKVFAHQLAFNVIPHIDVFLDNDYTKEEMKMVNETQKILHKNFAVSATCVR VPVLRSHSEAITIKFKKDFEISHVREILRNAPSIVLADDPSKNEYPMPLLSSDTNETYVG RLRRDNFDDKILHLWCSADQIRVGAATNAVRIALRWIDMQQDK >gi|257441256|gb|ACYG01000031.1| GENE 4 3240 - 5984 3366 914 aa, chain - ## HITS:1 COG:Cj1027c KEGG:ns NR:ns ## COG: Cj1027c COG0188 # Protein_GI_number: 15792354 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Campylobacter jejuni # 1 888 1 858 863 1152 74.0 0 MQSNMFENQEIIDIDVEESIKTSYLDYSMSVIIGRALPDARDGLKPVHRRILYAMNDLGV GSRQPYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQSFSMRIPSVDGQGNFGSIDGDGA AAMRYTEARMTPLAEELLKDLDKETVDFVPNYDESLNEPDVLPARVPNLLLNGSSGIAVG MATNIPPHSLDELVGGLLILLENKNASLEEIMGEIKGPDFPTGGIIYGKKGIIEAYKTGR GRVKIRAKTHIEKKASKDVIVIDELPYQTNKARLIEQIADLVKEKQIEGISEVRDESDRD GIRVVIELKRDAMSEIVLNNLFKQTTMEATFGVIMLAIDGKEPKIFTLIELLKLFLNHRK TVIIRRTIFELQKARARAHILEGLKIALDNIDEVIDVIRNSADTNVARENLMSRFDLSEA QSGAILDMRLSRLTGLEREKIEEELKEILAEIKRLDAILKSEELIEGIIKDELLEIKDKF KCPRITEIVDDYEDIDIEDLIANENMVVTITHRGYIKRVPSKTYEKQKRGGKGRVAVTTY DDDFIESFFTSNTHDTLMFITDRGQLYWLKVYKIPEGSRTAKGKAVVNLIQLGADEKIMA IIPTTDFDPSKSLVFFTRNGIVKRTNLSEFKNIRSLGIRAISLDEDDTLVTALIAPNSAE EMQNYKGGALSGDDLDGGEAEEILEQTEQDILEGSEDEISDEISQDEGAQDGEPQSTNEN MLFIATKKGMCLKFNLNKIRQMGRIARGVKGIKFKEKGDEVIGAAFILSDMQEILSVSQK GIGKRTTASEYRLTNRGGKGVICMKLTNRTGELIGVVMVDEEMDLMALTTSGKMIRVDMQ SIRKAGRNTSGVIVVNVEGDDVVSIATCPKAEEGDEGEADELAQDENLLNSNLDSKDSQS DGPSDEILKGGEDE >gi|257441256|gb|ACYG01000031.1| GENE 5 6023 - 6640 439 205 aa, chain - ## HITS:1 COG:Cj1028c KEGG:ns NR:ns ## COG: Cj1028c COG1040 # Protein_GI_number: 15792355 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Campylobacter jejuni # 1 204 1 190 191 162 43.0 5e-40 MRCVNCGAFSLRTICAACAANLAECRLSMRQVEGFSVFYYYGYSEIRELILSKHHEYGAA VLARIASLSLAKFPLHLQREISANPQNYEAFKTGGIFKFNAVPLDDDARSGYSHTAILAR ALKSELIEPKFRCLRAQNRVKYTGQSLEFRLKHKRNFKILTPPQFPVILVDDIITSGLSM LQARETLIDGGFMPVCGLVLANAKE >gi|257441256|gb|ACYG01000031.1| GENE 6 6641 - 7189 564 182 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1214 NR:ns ## KEGG: CHAB381_1214 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 182 7 190 190 126 41.0 4e-28 MKKFLLGVFALFFVACSQTSSVISLNPYLSKADQTVSGKSVNINAINDQRENQMVIAVIN DNDGKLVDEVLLKNNLSAWFDKALRAELEARGVRIDPASPNIVTVNIRSISAAINGYSKE NMSARGEIAISIVQGNKTTTKRVSQDQSQFTALRTARSLNPFVQSLLGDIVKKSADQIIL TL >gi|257441256|gb|ACYG01000031.1| GENE 7 7282 - 9573 2150 763 aa, chain + ## HITS:1 COG:Cj1157 KEGG:ns NR:ns ## COG: Cj1157 COG2812 # Protein_GI_number: 15792481 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Campylobacter jejuni # 1 346 2 345 509 417 60.0 1e-116 MQALALKYRPKSFEQLIGQDAVAKSLAHALDSGRLSHAYLFSGLRGSGKTSTARIFAKAL LCDKGPTGKPCEVCDNCVMANEGRHIDIIEMDAASHRKIDDIRELIEQTKYHPASARFKI FIIDEVHMLTKEASNALLKTLEEPPAYVKFILATTDPLKLPVTVLSRTQHFRFKPIAKSA VVAHLAQILKTENIAYEDGALEILARSGSGSLRDTLTLLDQAIIFSREGITQRAIADMLG LLDPAKIGEILDIVLRQDRAGAIEIIKEVENYNAETIIDEMIANLKDKFLRRDAKFSLLM YERFFRILAGAKSMLAISPDNTYAISMMIFMMMEAVNLREIDELIEVGRSLDQGEDYASA SAPNLNAQSSAPNFRSNSNQSAAFTSNNEPGGAAFASSDRGSAISGVPSFTASAKRPVNT AQNSGAGGAAKQSHDANGEIKPGAAAQAQNSSSSVKTGAQNEIYENFLAKIYDRDYDMGE KFSKCVEFLKFERGTLYLLSRAQGQDREYLRKGSRAINSVLKSLFGEGAKIKIEQSAPQN GDVPAQSERDQNSARGATATQSKNSTQDAASESGVDTTRPANSASQSPVNSAAQNFTESP TSSSVQENHAATQAGKQYHKNLTGEQESEQSCAPQINSTANEAQAAKLQTDAARNSEQQN LKNSATQNSAQRNSTTNSNSQNSASNSKLQNSEISVGDDDGEKDDLLRSTDPQNYAAKPR DTSKSVRAAKAGLAELANGAQDGKEILISEINRLFGEPTKITE >gi|257441256|gb|ACYG01000031.1| GENE 8 10339 - 11268 1394 309 aa, chain + ## HITS:1 COG:Cj0918c KEGG:ns NR:ns ## COG: Cj0918c COG0462 # Protein_GI_number: 15792247 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Campylobacter jejuni # 1 308 1 308 309 476 78.0 1e-134 MRGYKIFSGTANPEFAKKISKYLSLPLSECAIKTFSDGEISVQIGESVRGKDVFVIQPTC APANSNLMELLILTDALKRSSANSITAVVPYFGYARQDRKAAPRVPISAKLVANMMQTAG IDRVVTMDLHAGQIQGFFDVPVDNLYGSLIFLDYLKEKNLKNPIIASPDVGGVARARSFA KKLSLDLVIVDKRREEANKSEVMNIIGDVAGKDVILIDDMIDTAGTIVKAAGAFKEQGAK SVSAFCTHAVLSGPAYERIESGALDGLVVTDTIPLKQESDRIKVISVAPLFGEVIRRVYH DESVNSLFK >gi|257441256|gb|ACYG01000031.1| GENE 9 12068 - 12586 601 172 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1131 NR:ns ## KEGG: CHAB381_1131 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 172 1 170 171 206 60.0 3e-52 MKKFFALLFAALFFVGCGQSQPKVPIASAYKFKGITYQHFQNHNPKKFIYQSPEAVEKKY NEQLLAALKEANLLDQNSTDELKITIKHHRGFTGEATPFPSDRIGGIEFIYEVKLVRNGQ ILRSYVQNDIEHYDPGFFGNMKTIALQNTDDSYENAAIAAMVKHLMEIIKKF >gi|257441256|gb|ACYG01000031.1| GENE 10 12892 - 13635 958 247 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461244|ref|ZP_05626341.1| ## NR: gi|257461244|ref|ZP_05626341.1| hypothetical protein CAMGR0001_2793 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2793 [Campylobacter gracilis RM3268] # 1 247 1 247 247 428 100.0 1e-118 MPTFTTKDYKAALRSRSARTTSAGGFSIKNDNSFIVIFVIAMMAFIFFYGMSAGLDLDNF FLGNGHGRGGGGILGLLIAGVAWYQGRDGGGLFKFNDHAITFVSNERKSEILLFNIDYVR LTPGFLRTCTGYTALSHSRYVKHEQFFTFGIGSIIVLWLVGIAMSERVGMAFVIMVVGVV IFIFAKALSSWRLNGDFHDILLRDTVLIRGKDLNDRVLWFAITPGRNDRRRLRAYFKEHL DFDIDGG >gi|257441256|gb|ACYG01000031.1| GENE 11 13850 - 14335 294 161 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0483 NR:ns ## KEGG: CCC13826_0483 # Name: not_defined # Def: phenylalanyl-tRNA synthetase alpha chain (phenylalanine--tRNA ligase alpha chain; PheRS) (EC:6.1.1.20) # Organism: C.concisus # Pathway: not_defined # 4 161 84 235 235 113 39.0 3e-24 MAVGYENINRLDKRLFTLARDVRDFGLQHGLAELSTSKLALSEEINGHALSAIACGLSQE PAIYYRCPHAGGAVFVAFVAGECVAPDSTIKAGMDASELISLACDYIGAFQLNHAVLSGA LLMRNGTKFSEAAGKIVANFKNDALFSFDNLGRLSEVEFAV >gi|257441256|gb|ACYG01000031.1| GENE 12 14311 - 14553 364 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461246|ref|ZP_05626343.1| ## NR: gi|257461246|ref|ZP_05626343.1| phenylalanyl-tRNA synthetase alpha chain [Campylobacter gracilis RM3268] phenylalanyl-tRNA synthetase alpha chain [Campylobacter gracilis RM3268] # 1 80 1 80 80 151 100.0 2e-35 MKFLDRLGVDRSSFTDLFSACLGCGARVQEMGSKLIMKGRCRSVDFERGETLLGDDAPRT IWYIGSEASGSRTWPWGTRT >gi|257441256|gb|ACYG01000031.1| GENE 13 15171 - 16967 2349 598 aa, chain - ## HITS:1 COG:Cj1030c KEGG:ns NR:ns ## COG: Cj1030c COG0481 # Protein_GI_number: 15792357 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Campylobacter jejuni # 1 598 1 598 598 965 80.0 0 MKTKNIRNFSIIAHIDHGKSTLADRLISECNAVEARQMSSQIMDTMDIEKERGITIKAQS VRLEYELGGEKYVLNLIDTPGHVDFSYEVSRSLASCEGAILVVDASQGVQAQTIANVYIA LQHNLEIIPVLNKIDLPAADPQRVKDEIEHVIGLDCSSAIEVSAKTGVGIKELLEAIIIR IPAPKTDDDAPLKALIYDSWFDNYLGALALARLYDGVLKKGDEVYIMGSENRHEVLDLMY PNPLAPTKTRELSSGEVGIVVMGLKNVADVQVGDTITLFKKRAAAPVGGFEKAKPFVFAG IYPVQTDKFEDLRDALDKLSLNDSSLSYEPETSLALGFGFRVGFLGLLHMEVVKERLERE FDLDLIATAPTVTYAVYLTDGSCVRIHSPSELPAPNFIERIEEPYVRATIITPSEFLGNL ISLLNLRRGIQTKMDYITPERVLLEYDVPTNEIIMDFYDKLKSCTKGYASFDYEPIDYRR GDLVKLDIRVAGEAVDALSIIVPASKAESKGRDLVKAMKEIVPRQLFEVAIQASIGNKII ARENVRAMGKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGKVNLPSEAFLSVLKID >gi|257441256|gb|ACYG01000031.1| GENE 14 17341 - 23853 4105 2170 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0739 NR:ns ## KEGG: CHAB381_0739 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 326 2144 1110 2989 3010 352 26.0 9e-95 MKVKNFGFAPLLALLFCFSTGAFADDDRSNVKIVPATQLGNEYRTDGGADWRQGWIFRKN MKDSKSAGCGDSDCFFGVYNFSNIKKFPEDMRDQKPAVRFGGAGSYVFGDYAVTSGSVIT SSWPNSGTHYMFDSKGTYINDGGFTLNSSTSTLKLPKGVTADDIVYARLYWQGNVFNTEA LDGFKATKDYHKVQFRMRSSKSSKATDIEEIERDRCDGYAAWNYNANTRDGGQYDAKEAG VYKECKSGSGPHGCATNAKGQVLATKRLAVNYPRNRGWYYRSETDRNIPDTFTYNYTDRN GVKHSDLYYRWKNRGPIPGTENHLFWRYEWTDVLNEMRLQYGCSKDITNIVRANFKDYSD SIDFTVGNIKTSAGWDAYGASFLNGGFETARVGAYGGWGVVIVYDKTLASRRKLMDDLQN STEVTGAKASLAEAKKIRDTYFKPKNVTIYGDFITITPWSTPEPGYSPINVNLKLSGFYT PRQGKVNAKLGFLGFAGEREMREQEFFKVENKNKNTMDTLSGSVVNANLGNGFANIYDGS TSILELDSDGNYKLTYPKGTDYKWGMDLDEFDISSKMGNKQSSLDVQLGGASTQRPGGGE SADQNFISMLAVSVDMYVPNMCYQYEVYNASNWVKFFDKDGNRRSEEDVKKLHEPPEQIK NGVVAGENIYYRIRFENRYNGGNSEDAVGSIVSVNFNRAGATYTPNSATINNRLDDSEYS GVTTKINAIPMKASQNLVYLRDGQLGAYQTMKDVITDGKAPNVTDAIYKNRQFTTLENGL LKVYIGEDAGRWVPPSKPDEQPTLIGGRMKPGKAAYAEFNATVNTGAKILQAPEMLLSYK ISLDVGTGTPVEISLEGASELEICDDKLLSDSVNIQPLEGLQVVNKNFKNSDDDDRLYTQ VSEMPFDGKLIFRPDYESHFCKKYNSTGECEQYTAEAASRTDLFVKDPATGELKYIGGKK QLEKFNLDGKLYLSVVRAKNAAMTAAKAVKDRNSTAYSCRAITDNLKIPFKLKQKGGGAS SYALDHELDFKNKSILDLEDIEIGDAYQGVTFMLSYRPDGQANKTTKNDYAVDEDDPVKY YLALKKMELREKYGVCYTGDTYGWCKPLSDAEKAEKEELIKKELAKFANEISKASNTFGI TMSSDGSFHVCGSDNFVIRPAYFNVDTAELTKYGKLVDTSADGDITNKGSSDASVVSHPK DLRVGGDYTENVDILAKVISARSYKGNGVPNYNAVIGGDLGNERYHIRDSYKYSDADSAQ DISTKVRGIQTYLRPFISNQCAAELSTQSYYIKRAGGNATLQTGHKLDGCYGGTQTEYNG IEYDSKTGSYSVKKGISDADIKKNTFGKGNTQCKTTSGEINFDETYRRIWDKNAISLWAD FNARNVSVTDAVATYKSKGNAEGSYLLTQSRMSPEQKDKVNGVLYTEMAYTTTEPKIAKH YFNYYNVGDVLVNVYDNSWTDAYADQTYSTKWKSAKCVINSSSNVPNNKGMVGCDVGMKN KSIVESSDPKISATNTNLVLRYRPDRIRVSLVSLDNGVTSGVGSIIGSRNVPVTDNNITG GISAYTYFNSPDIENNVVIYPGEDPRQNLAVTRQISQLAMLRVNAVAYLSDKVYKDVIAT LYDGYKRDIGGNPQAVCGFSSDLDFALDFGFDCEHNNADGRCSKATNASKTSANINYAPY PDRSTVIYQIDKDTQFFAANSNECLGSTGYDSRCYKYNIRSQNNASTTDGIPDWEEAASG GGYGLPIPLRTALNYYSDANLVGGLINRPQGGTGINYDSKSSLFRILAQGFKEGQTPGST VYFNFARMQKSPSTPVLIYASDFDIRDGVSTSENFWPSKFDKLYNAISDTTSEQYNKDGI KLSHESFDDFVTRKVEETTGVKKADMSVANKAAYINTANTNSKTYKTGTTITDFSDNIGT YALFVYGASYDKSLGSRVYNTTTRSSVTIPIYAQIYCGRTDGCSNMPAPNENLAYEVPGV VNASGNVIASNIFTVLAAQDHSLTDFTKFVVNTRATLNNIDAEFVSAYDSLTKVGEVGVN VTRGNVISAGKEDIIVSGSTAGQARVRIITSPWFIHTPAGNENTMFMVAGGGAYSRQYPG VRQYFNPLNVSIRAAQPTVWGGEGQVKSGIADDVGSFAGGSSSDNSTSDTSTRKLDTGDV RDIYNQKTDW >gi|257441256|gb|ACYG01000031.1| GENE 15 24186 - 24728 532 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229532345|ref|ZP_04421727.1| SSU ribosomal protein S30P; sigma 54 modulation protein [Sulfurospirillum deleyianum DSM 6946] # 1 180 1 171 171 209 57 4e-53 MNLNIVGKQFELTEAIKNYVENAFETLEKYNLDIISGRCVISADEKQGKKGFVVDFSLNL AHQDTIVVRQKDKDLYAAVDLIVERASKVLRRYHDKVNSHKNRDEMKQNAVDNAISSKEP NLNDEVDEIVPTELELYKPLEIDEALNKLKESTDQFLVFNDMDAKMRVLYKRKDGKFGLF >gi|257441256|gb|ACYG01000031.1| GENE 16 24744 - 25280 311 178 aa, chain - ## HITS:1 COG:no KEGG:Sdel_0854 NR:ns ## KEGG: Sdel_0854 # Name: not_defined # Def: hypothetical protein # Organism: S.deleyianum # Pathway: not_defined # 4 178 1 153 153 74 33.0 2e-12 MKTMQKGFALVAAIFFIIIVSTTAITALSIASMTARDVNNIQGREQALLLAQSATELAVL AMQKHQYLTTELKNGGATAATNPTLNRIRLAYPSNNAGEKMFDITVTFGYFDRQLGADAD HTVAYSNFGQGSSEALPSGKGVGKILSHAALIDVVVRSNVEVMGRPQITYHRRTIQKP >gi|257441256|gb|ACYG01000031.1| GENE 17 25280 - 26353 926 357 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0553 NR:ns ## KEGG: CHAB381_0553 # Name: not_defined # Def: prepilin-type N-terminal cleavage/methylation domain-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 356 1 310 311 187 37.0 8e-46 MKRGFTLIELVFVIVVLGIISMFGADLYTKIYKSYVHVRAVNQLEARTQNAMMLITNRLE DRIKSSTIGRELSSNEFVPISDLTDPRYDILEWIGQSVETRNINQRTPGWSGFMSMSQLK DSTWTAGTQDAGYIANTRAEFNMVSLGSDFPQVANIVGNLRATAYNTPSNNTQVAVIFKV VTNDASPTSVGIGFGYDRRIDENGSNRVLIAVGTPSNAGSGNIQGETIRINQYPLNPNND NSQEFSEQYYIAHSAYAIVPDLGGRDSIVYTRDNDGNVLSKNFDLVLKYNYRPWSTVEKD AHSYDKASSSLLAEDVSLFRFKDDNGAVALKLCMRDDGRNFDPSELDLNVCKAQVVY >gi|257441256|gb|ACYG01000031.1| GENE 18 26366 - 27106 694 246 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0552 NR:ns ## KEGG: CHAB381_0552 # Name: not_defined # Def: prepilin-type N-terminal cleavage/methylation domain-containing protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 213 1 184 203 99 35.0 1e-19 MKKGFTLIELIFTIVILAITTMAIPRIVAQTTELNALAIKEELVYNAKAFMSRISKAQWD SAYAGDASCGGDSSCMKRILTVNPPADGAPEVRPGILNEASRREVSAQAPATKKQFGRKG ISFGGARYNDIDDYDRFTTDITVGDLVGSSSKGDFILNTRINVDVDYVVEPFSAAQYATG TDIRGVLSDLPNDESAAPTNIKMVRVAATDLNDAVAKDGTAKSVVLKAFLSNIGVGVQTT ATRRYN >gi|257441256|gb|ACYG01000031.1| GENE 19 27360 - 28007 682 215 aa, chain + ## HITS:1 COG:Cj1074c KEGG:ns NR:ns ## COG: Cj1074c COG4105 # Protein_GI_number: 15792399 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Campylobacter jejuni # 4 215 1 213 215 192 46.0 3e-49 MTNLSKILSALLFIAFIGGCSGKGDGELFNLSPEAWYSKILEDINNASMEDAEKHYTSFS SEHIASPLLEEMTLIMAWAFVEDENYEKANKYLDEYIRLYGTTQKIEYARFLKIRANFDS FSRPNRNQKLMLNSIDEIRKFIAEYPQSEYRPLLETMLTKLRLAEHQLNIDIKDLYQRTD RESSAKIYEQRIEESPLNGTDVIKPHSPWYRAIFE >gi|257441256|gb|ACYG01000031.1| GENE 20 28016 - 30532 2816 838 aa, chain + ## HITS:1 COG:Cj1073c KEGG:ns NR:ns ## COG: Cj1073c COG0466 # Protein_GI_number: 15792398 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Campylobacter jejuni # 1 838 1 791 791 962 60.0 0 MQLMQNTTFPSDLPIIVEDELFLYPFMIAPLFIGDEHNKKALDLAAKNESMIMVVSSKSE FSGDRSFGGIYNAGVVGSVMRTVPLPDGRVKILFQGALKGKIVKEISQDPLVATVDIIHD ERGNDQKLDALVSVLKEKTKTLSTLTHFFPNDLLKTIDDGTDAARVCDLILSALRLKKQV AYSFFTESNLQKRLFNLINYISDEIEANRLEKEIKSKVHSKIDKTNKEYFLKEQLKQIQK ELGGDADRDVEIEEYRKKLEAKKPYLGEDAYKEIKKQIDKFARLHPDSADAGLVQSYLDW VLEVPFEKTAKHKMSIEGVTAQLNKDHHSLKKPKARIEEYFALKQLLELRGTSGKKSKED GKNGGAILCFYGPPGVGKTSLANSIATALKRKLIRIALGGLEDVNELRGHRRTYIGAMPG RIVQGLIEANQMNPVIVLDEIDKISSSYKGDPTAVLLEILDPEQNSSFRDYYLNFNIDLS KIIFIATANDVSLIPAPLRDRMEFIELSSYTPQEKFQIAKDYLIPQELQRHGLKSADVAI NPAALAEIIEEYTRESGVRNLRRQIAAIFRKVAVKILKDKEFKKIVVTTKNLSEFLNKKV FEIDEVEKRDQIGIVNGLAWTAVGGDVLKIEAVKIKGKGAMTITGQLGDVMKESAQIAFS VVKVLIDEGKLKAAQDAKGGTEKASRASKNSALRANGGASKSSAAAQNLGVEENSEGQNS EQIYNKFDLHIHVPEGATPKDGPSAGITMSTAIASILSEREVRADLAMTGEITLSGKVLP IGGLKEKLIAAHKAKIAEVLIPRKNYERDLAEIPDEVKNDLKITLVDRIEEVLKLALV >gi|257441256|gb|ACYG01000031.1| GENE 21 30941 - 31111 132 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461256|ref|ZP_05626353.1| ## NR: gi|257461256|ref|ZP_05626353.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 56 1 56 56 104 100.0 2e-21 MFDFKKEFRQLYAPKQVPQILTVPPANFVCVRGEGLFNMKLNFIRALATTKTDEQR >gi|257441256|gb|ACYG01000031.1| GENE 22 31108 - 31818 588 236 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0669 NR:ns ## KEGG: CHAB381_0669 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 2 236 6 242 242 249 53.0 8e-65 MKQKDFVIAAMIELGGAATLSQLYSATDVSSWSAKTPFASIRRIVQENAEFFKIRPGLWG LKSLETQILKEFESGANPRDSFTHSYFQGLIVEIGNLRKFQTYVPPQDKNKSFVASKKLD DLTSLKAIYEFAYPSILNKARSVDAIWFNERNLPYAFFEVEHSTDFKNSLNKFYELQDFN AKMFIVADEGRLRQFQSVISASIYKDIAGNVKFASYESIAKQYDLESESTKVKMGV >gi|257441256|gb|ACYG01000031.1| GENE 23 31818 - 32009 163 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461258|ref|ZP_05626355.1| ## NR: gi|257461258|ref|ZP_05626355.1| protein DpnD [Campylobacter gracilis RM3268] protein DpnD [Campylobacter gracilis RM3268] # 1 63 2 64 64 82 100.0 1e-14 MKEFEVEITETLAKKVVIKAKNKEEACKIARTAYENCEIVLSAENFVCADFKATIADEPK TEI >gi|257441256|gb|ACYG01000031.1| GENE 24 32017 - 32838 663 273 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1228 NR:ns ## KEGG: CHAB381_1228 # Name: not_defined # Def: restriction endonuclease R.IB # Organism: C.hominis_BAA-381 # Pathway: not_defined # 4 272 3 272 273 298 60.0 1e-79 MEPNLTKFDDFLRSLRKTNASLDYFTDFEKCGKNLKAVSIKLHTLDFLLGSKDLKTDIFT LFGQNKWCFDVLNLLIAVRDKNTDVIATSGELTKLGTYFKSPEKIYEFCQESGLDKIFTD GKVKNLHDYVFGVEVGLDTNARKNRGGVNFARTISEYLKSENICFQTEVSSRNFALNLGS DQKIFDFVISIGGVTYLIEANFYGTGGSKLNEVARSYIEIAQKIALCGGFKFIWITDGQG WLAAKNKLEEAYKSVKIYNLATLYYFIKELKNV >gi|257441256|gb|ACYG01000031.1| GENE 25 32831 - 33646 645 271 aa, chain + ## HITS:1 COG:jhp0085 KEGG:ns NR:ns ## COG: jhp0085 COG0863 # Protein_GI_number: 15611155 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Helicobacter pylori J99 # 1 261 13 274 277 373 70.0 1e-103 MFKLADDFKLFKGDCFNILPKFKGEFDLIFADPPYFLSNDGLSIQNGQIVSVNKGEWDKS YGIDEIDKFNLEWLALAKDALANNGSVMISGTYHNIFSIGRALQKLDYKILNVITWAKTN PPPNFSCRYLTHGSEQIIWARKSEKFKHIFNYELMKKLNGNKQMRDVWSLPAIAPWEKAC GKHPTQKPLPLLVRLILMASTQNSVVCDPFAGSATTGVAANLLGRKFVGIEKEDEFIDIA VKRKRDLDANFAKFRRKIVDLRLLEQESLKF >gi|257441256|gb|ACYG01000031.1| GENE 26 34217 - 35116 957 299 aa, chain + ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 4 298 3 297 301 221 44.0 1e-57 MRSQNEFFGVFITLLGGVLWGFSSVCGQYLFTQKGVSADWLVPYRLSLAGLAMVAYYVAR SPRLAFAPLKDRVLLPQLLIYAFFGLMMTQYSYFCGVELSNAAVATAIQYSAPALILAVV CFLERRVPKKVELIALIFAVLGVVLLATHGDLGSLVISAEALVWCLISALGVVIYSLIPT KLNQKYPVPLNLGWGMVIGGGALALYTRVWQLGGVSDADGFAVLVAVVILGTICASSFYM TGLKIIGASRASMIACIEPVSAAAFAYFWLGTEFVFLDFAGFTLIISCIFLLAKDRKKA >gi|257441256|gb|ACYG01000031.1| GENE 27 35130 - 35552 378 140 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1127 NR:ns ## KEGG: CCC13826_1127 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 129 1 129 140 182 69.0 4e-45 MIYLAQTDTTAGFLSKDFREINALKRRAADKPCLITTAKLSELKNLARVPAKFKNLVRRA RKTTFLYPNGTAVRVVKECAHEEFLRQFDWLYSSSANLNGQNFDEAWAKAAADEVVDQNF SQNASSKIYKISKTKILRIR >gi|257441256|gb|ACYG01000031.1| GENE 28 36661 - 38037 1921 458 aa, chain + ## HITS:1 COG:PM1740 KEGG:ns NR:ns ## COG: PM1740 COG2610 # Protein_GI_number: 15603605 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Pasteurella multocida # 1 458 1 458 458 562 75.0 1e-160 MSGVALIICFAIAVVVMIFLISKAGVHPFLALMLISLALAIVAGIPLAKIPAIIGDGFSG TFKSIGIVIIFGALIGTVLEKTGAALKLADMVVNVVGQKRPELAMLIMGWIVGIPVFCDS GFVVLNPIREAISKKIGENPVALAVALSGGLYASHVFIPPTPGPIAAAGAVGLGGNLLLV IAMGAVVSLPVLIATYFFSKKVAKSVHISEAEANEVIAKSYDDLLKQYGKLPGGFLSLAP ILVPILFMALGSVAKILKVGGFAGEISQFLGNPIIALALGVVFAVFLLAQTGKLGEFSEI TNESLKIVGPILFITAAGGVLGKVITDAGFVTYIKDNATAIKAAGIFFPFLISAVLKTAQ GSSTVAIITTASIMGAFNADGSLMQVLGFTSEMSGALVVMAIAAGAMTVSHANDSYFWVV TNFSKMNPQQGYRTQTMLTLIMGITGMISVWVLSLFLI >gi|257441256|gb|ACYG01000031.1| GENE 29 38371 - 39507 1197 378 aa, chain + ## HITS:1 COG:SA2220 KEGG:ns NR:ns ## COG: SA2220 COG1929 # Protein_GI_number: 15928010 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Staphylococcus aureus N315 # 2 373 5 379 380 283 44.0 5e-76 MKVLVAIDSFKGSLSSLEAGNAVKSGIEKLGCEVLVKPIADGGEGSVEALADALKARFMD VIVANPLGEKTPARYALKGELGILEMASASGLPLIEKSRRNPLKTSTYGFGEMIAHAIAH GARKFIIGIGGSATNDAGMGMLRALGFKFKDANGAELAGAGEDLIKLATIDYTSVLPHLK ECEFLIACDVDNPLFGENGAAYIYAPQKGADAAMVKQLDAGLINFASVVSKHLGRELWNS PGAGAAGGLGFGFVSFLNATLKPGIDIITEEIGLDRDMKGAELVITGEGRLDFQSSMGKT PCGVAKIAASYGVPVIALAGGISPCAGSCNERGIGAFFCILNEPMSLERAMEKETATQNL ARVAEQAVRLFLLGHGAK >gi|257441256|gb|ACYG01000031.1| GENE 30 41376 - 42182 801 268 aa, chain - ## HITS:1 COG:Cj0452 KEGG:ns NR:ns ## COG: Cj0452 COG0847 # Protein_GI_number: 15791816 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Campylobacter jejuni # 3 250 4 249 253 229 49.0 5e-60 MTHRIENLINLLAQKSINYYDFISKASDIAEITELFEPKDLSMWRALGIEIIKLDSGKIT LKTRETDILDEIFCFVDIETNGGLSNGQIIEIGAIKTRGTQELDRFESFVYAPVVPENIT ELTGICADDLVGAPPLASVLERFRLFLGDSVFVAHNVKFDYGFIDASLQKCGFGMLLNRR LCTVELARRTIEAQRYGLGSLKELLGVQNVHHRALSDAVSCFEIFKFALSRLPWSVQSTE DLILFSKTAKSLALPKPQISERGEGEIL >gi|257441256|gb|ACYG01000031.1| GENE 31 42204 - 42845 733 213 aa, chain - ## HITS:1 COG:Cj0451 KEGG:ns NR:ns ## COG: Cj0451 COG0036 # Protein_GI_number: 15791815 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Campylobacter jejuni # 1 213 1 213 215 285 64.0 3e-77 MYVAPSILSADFGRLAEEIRAVCEAGADLIHVDVMDGHFVPNLTIGPLVASAVAKASSKP LDIHLMVKNVPFFVDLFLPLKPKFLSFHIEEEQHPLRLIDHIRRSGVSPAVVLNPHTPLS ALEFILGEVDMVLLMSVNPGFGGQKFIPSALEKIKQLRDLIDRKGAKCLIEVDGGVNGLN IADIDEAGADVVVAGNYIFSSNDYAEAIRALKI >gi|257441256|gb|ACYG01000031.1| GENE 32 42990 - 43181 265 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154173798|ref|YP_001408511.1| 50S ribosomal protein L28 [Campylobacter curvus 525.92] # 1 62 1 62 63 106 83 4e-22 MARRCAITGKGAMVGNNVSHANNRTKKKFQVNLRTIRVQLEDGSTRRIKVAASTLRTMKK QSK >gi|257441256|gb|ACYG01000031.1| GENE 33 43200 - 44330 942 376 aa, chain + ## HITS:1 COG:jhp0442 KEGG:ns NR:ns ## COG: jhp0442 COG1226 # Protein_GI_number: 15611509 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Helicobacter pylori J99 # 3 376 1 376 378 343 46.0 3e-94 MSVLDKIKRFLDWSGSTKPDINLYTEIYDQLRPFRLPLITIVLMMLIGTLGYVFIAGFSL VDAFYQAGMTFTTVGFTEVAPISPAGRIFTVLFILMGFGTFSFCLGVVVEVIKNGKLQNL LREQRMINNIARLKNHYIICYNNIYCAELAKQFRENHLPFVVIDPDPALAKIAEENRYPY FIVGEPHVETTMLKAHLSSAKSVITLSPNLADNIAIISLVRLYEKELGRITPYFIMANSD DDSDTERLKKLGANSIVSPSKLAAQRLSAISVRPDMENILERFLYKKDSLIDIEEITVPD FSWIRFKRLKETRLRDLTNADVVGIKEPNSRFIPMPDGDYLIGTGVKFLVIGTAEGIRNT KKLIRSKYKPQEMRYV >gi|257441256|gb|ACYG01000031.1| GENE 34 44323 - 45516 1049 397 aa, chain + ## HITS:1 COG:lin1632 KEGG:ns NR:ns ## COG: lin1632 COG1364 # Protein_GI_number: 16800700 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Listeria innocua # 7 397 4 398 398 249 37.0 6e-66 MFKITKLEGGLQNVEGFYFDGVNSGFKKQGNDLGFIRADEPFAISAIFTSNKFQAAPIRH FKRAQERAGGELKTNFILVNSKNANSMTGEQGIADIDEIFSELGKKTALINPVMSSTGVI GYRLKKEKIIAAAQNFNLSARNSDALATAIMTTDTIKKELAYEISLENGEKFHIAAVCKG AGMINPTLATMLCFVLTDAKIPRADMDELLKKAAEQSFNTISVDGDTSTNDTIMLCSSAK CAYEKDAFASALNALTRELALMLVKDGEGATKLVRFRVSGAANAEDARRAAKALSNSPLV KTAIFGEDPNWGRIASTIGACGIECDEEKLRIKYDDVLLYDAQNRELDAAREAAAHAVMQ QKSFTIWCDLGLGEGDFSAYGCDLSYDYVKINADYRS >gi|257441256|gb|ACYG01000031.1| GENE 35 45764 - 45994 406 76 aa, chain + ## HITS:1 COG:Cj0449c KEGG:ns NR:ns ## COG: Cj0449c COG2841 # Protein_GI_number: 15791813 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 1 70 1 70 71 65 58.0 2e-11 MFHEYRDLITELKGKNARFDSLFEKHDELDHKIADAQAGRVHMSDLEIDAMKKEKLRIKD ELGSLLAQYKAEKADK >gi|257441256|gb|ACYG01000031.1| GENE 36 46859 - 47299 560 146 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1224 NR:ns ## KEGG: CHAB381_1224 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 146 1 145 145 134 47.0 9e-31 MNKNDTIKAIEKFVSSQEMTMFRLKKGIYGDAMKNLDQVFTPYKEFAEFFKNPANRLQEL LGNIAYESILNYTEAGLSHCEKIHSIYFVESKGFFKSGLKYIEPDATARERAKSYYDKLL ENNEKLNEYIDIGLQRLHGLEAKVFE >gi|257441256|gb|ACYG01000031.1| GENE 37 47434 - 47787 418 117 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0515 NR:ns ## KEGG: CHAB381_0515 # Name: not_defined # Def: zinc uptake regulation protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 115 1 115 117 154 66.0 1e-36 MDPKDFLASHDIAPTALRVQIVQILSEKKCPVSYDELVEQTGANKTTIYRNIALLEEKNL IITSENNHKSFYELTDGAKAYFVCESCHKMEEISMPALSQKNVKSVLVRGLCEKCGG >gi|257441256|gb|ACYG01000031.1| GENE 38 47901 - 48827 890 308 aa, chain + ## HITS:1 COG:Cj0143c KEGG:ns NR:ns ## COG: Cj0143c COG0803 # Protein_GI_number: 15791531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Campylobacter jejuni # 21 308 34 296 296 207 40.0 2e-53 MKKLIFTLLAASCVVFAKPTVTTTILPTKYFVEQIAGDTLQVNTMVGKGADPHTYEPKPS EMKMLENSDLYFAVGIEFDEVWLPKLAASYPKMKIIRTEDGITKMAMAEHHHHDEHDHSA HHDDHDHDAHHEHGDKDHEAHEHHHHHGGLDPHIWLDPQLVKIQAKNIKDALTKQYPKDA KIYEANFDKFAKKLDELDAYAKQKLAGVKGKKFMVYHPSWGYFAHRYDLKQIAVEVEGKE PKPADLAELIEEAKEEKIKVIFVAPQFSKKAAQTIAAQTGAKVMEIDQLPLDWYETMKKT IDVFGENL >gi|257441256|gb|ACYG01000031.1| GENE 39 48831 - 50984 1402 717 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_1499 NR:ns ## KEGG: CHAB381_1499 # Name: not_defined # Def: transporter, Ni2+-Co2+ transporter # Organism: C.hominis_BAA-381 # Pathway: not_defined # 280 716 133 490 490 210 33.0 2e-52 MKFIKILLLSAIFSSRIFACALCALYTPTAHVSITPVAQDGKIVSLHFSWLFSQNFTDVI MQTYDINSNGKLENSELAEITKAMTDYLTPKNYLCEAEFYDQAPKNAKPALSNLVGTQIK GNFKNAISLVKKGRLVFEFDQKVGFELQNNRVLKISINDDQGFFNFKMLDDKPINLGEGF VAKPNSNLATTFIEFSGEKPKIADKKPPISGAPNSDLAQDDLASSQQSLAGSEDKLAQSR QTKPNASSARRSNQRSVGDIVSEAAAEAQKNIAASDALAQINKTAKKDAQAKDGPANSAA SVDKDAGENFAARRDNSLNSTQNFATPPEESSLNLVQNSASKNGAASGSSDISSEQHKET ALGFVAQKTMDFMKSLKTAFRASSEHASASTILWVLALSFIYGFFHAAGPGHAKLLTASY FLAHGGSYVKAFGFALKIGLLHVLGALVLVSASMFVLQNVAGIVSANSASITTKISALLI IIITALIIYDKARRVRSGAGHDAGCSCAACASAANTAETDAHLKNTAFANAGNSAGAASK SYKFSKFNIQSGESAQYLDTQNLDAATAELNSDSNLAANLEENSSSQNKQKQTLNSTNSK NQTSSRSLQNGATGGGERGREWLIALAAALVPCPGTILIFVLAFSLGSFALSVASALFIG FGMSVVIFLAALFGAKANELSSKRLVSLKLYIEFAGLFVMFGLGIFMYFISDTLRIL >gi|257441256|gb|ACYG01000031.1| GENE 40 51226 - 52176 855 316 aa, chain + ## HITS:1 COG:no KEGG:CHAB381_0874 NR:ns ## KEGG: CHAB381_0874 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 60 310 67 313 324 93 28.0 1e-17 MSPALQDVVSQTLTEQKACARAFNRYRYLSIAAFFTVLFAIMSLDGVKADTPLIKIAEFL GALIFFPIFWIFFLHCAGQKTEAEIRYYKFYKEIFVHAVINDMNADLNYYPYTGMQEEEF QKFRIGRKSGIESEDRITGVHCGIQFSLSEVHSNSRFYMGTDNPLIAAIALIKIFYDNYM DFNGNVLICELAKKTSGKTIVVSRELNAKIFGEKEMMDDVDFMRDFRVFADDKVEARYLL TPAFMERLREINRETNGEFSLSAVFMDKRLYLFLKGAPDLFETTLFDRPASIELALEYQT QIRKILSLIETLKLTN >gi|257441256|gb|ACYG01000031.1| GENE 41 52776 - 54353 1838 525 aa, chain - ## HITS:1 COG:Cj0891c KEGG:ns NR:ns ## COG: Cj0891c COG0111 # Protein_GI_number: 15792221 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Campylobacter jejuni # 2 525 3 527 527 656 63.0 0 MKTIIVCDAIHKIGFDLLKQESDVKVIDATSVPKSELYGILGDADVAITRSSTAVDEKFL GAGTKLKAIVRAGVGVDNCDIDGCSKRGIILMNVPTANTIAAVEMTMCHLLNAARKYVNS CNDLKINRIWKREKWYGTELYKKSLGIIGFGNIGSRVGVRALAFGMNVIAYDPYIEPEKA TKLGVKYTKNFDEILSCDFITIHTPKNQETINMVGEPQIAKMKDGVRLINCARGGLYNEK ALANNLRSGKIAYLGIDVFDKEPATDHELLDIENLSATPHLGANTLESQSNIAREAAEQA ISAARGLNYPNALNLPLKLEDLPRGIEPYINLVSKMAYLAAQINKGPIKSIRIEGSGEVV QYLKSMLVFAIVGALHDSLGDSLNYVNAKFLADEKGIETSFGELTNSVYKSEIAVKIMTD EAISNVAGTVFDGSEERIVNIGGFKTDFKPKGKMIIFKNTDVPGVIKSVSTILADENINI ADFRLGRGEEGDALAVILVDSEVQKSTLDKLAALQTCLMVRYAAL >gi|257441256|gb|ACYG01000031.1| GENE 42 54408 - 56075 2070 555 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154147885|ref|YP_001406069.1| 30S ribosomal protein S1 [Campylobacter hominis ATCC BAA-381] # 4 555 3 556 557 801 71 0.0 MAEVNEKVQNHAEEDFATLLEEYDTGKSRDEVVTGKVIALKDGEVFIDVGRKSEGILDAA EVSDEQGNPQVNVGDDIKVAIIGSRGGRPVVSYKKALKKEKVKAFIDSYDENAENVYDVK ILSFNKGGFVCANADDVEFFMPRSQSALKNPNGAVGKNFKVKIIKVDRDEQSIVVSRKKL LDEDRKASKEAIEKVIATEGIIEGVVKKITTYGMFVDVGGVDGLVHYSEISYKGPVNPSS LYKEGDKVPVKVIKYDNDKKHLSLSIKEAMPDPWNEIKDSLEVGDTIRVKVSNIEPYGAF VDLGNDIEGFLHISEISWDKNIKNPKDFISEGEELDVEVVEINPSERRLRVSLKNLLTKP FDEFVAKHKVGDVLKGSVTTITNFGAFVRIDGVEGLLHNEDASWDRGEKCKNLFKVGDEI EVKIIKIDKDTQKISLNHKELGDSPISDYAKSHNQGDVVKGKIRDIKEFGIFVELGGGID ALIRKEDLGNVSVDSLKVGDEIEAAIAFIDEKKNRIRLSVRRLAHQKEREALNEINSNDD EKQSLGDLIKDQLNK >gi|257441256|gb|ACYG01000031.1| GENE 43 56188 - 57024 539 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168184863|ref|ZP_02619527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog [Clostridium botulinum Bf] # 1 273 1 277 644 212 37 7e-54 MKIEMAKSYGFCFGVKRAIKIAESAGEAATIGELIHNSEEINRLRQNFGVKTLEGVSEIK DEQKLIIRTHGIQKDDLQRLKAQNKELIDATCPFVTKPQQIVEKMSAEGYDIVIFGDKNH PEVKGVKSYAKSRVFVIMDTKELQDVKLGPRVALVSQTTKKIESFTKIADFLMQRARELR IFNTICNATLENQEAVKSLSQKADVMIIVGGKNSSNTKQLFLISQNFCKDSYLIENESEL ERSWFENKSLCGISAGASTPDWIIKKVVARIENLTQNL >gi|257441256|gb|ACYG01000031.1| GENE 44 57014 - 58288 1361 424 aa, chain - ## HITS:1 COG:Cj0895c KEGG:ns NR:ns ## COG: Cj0895c COG0128 # Protein_GI_number: 15792225 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Campylobacter jejuni # 1 423 1 427 428 481 58.0 1e-135 MRIFAQASPLRAEISNIAADKSISHRAAIFSLLAEETSKISNYLAAEDTLNTLKIVELLG ASVQRVEGEILITPPEIIKEPNVPLDCGNSGTAMRLFMGFLAGCEGFFVLCGDRYLSERP MRRVADPLCKVGAKIYGRAGGEKAPIAVLGQKLGYFEYASKIASAQVKTALILAALRGSG CKFSEPELSRDHSERMLKAMGAQISQNGLEIEVAPLSSPLKPFEIFIPNDPSSAFFFAVA AAITPGSCIVLKNMLLNKTRIEAYEILKRMGAEVKFHKTSEIYEQIGDIEVAYAPLHAVE VSENISWLIDEAPALAIAFACAQGSSVLRNAAELRVKECDRIKVTCEGLRACGIKARELQ DGWQIEGGEANAAIITPCGDHRIAMSFAILGLRSGMIIEDSDCIATSFPNFAAILRQIGA GVED >gi|257441256|gb|ACYG01000031.1| GENE 45 58285 - 60615 2414 776 aa, chain - ## HITS:1 COG:Cj0896c_2 KEGG:ns NR:ns ## COG: Cj0896c_2 COG0072 # Protein_GI_number: 15792226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Campylobacter jejuni # 142 776 1 632 632 520 45.0 1e-147 MIITRNWLQEWIDISEIPSERLLSTLNSIGLEVDAHDKISLPKGVVVGLVKSKRRHENSD HLNVCEVDVGKQSLQIVCGAKNVEAGQYVAVSLIGAVLPSGLEIKPAKLRGVESFGMICS ATELGLAKTNDGIMVLDSSIGELVLGKELREYEIFNDDLIEIELTANRGDCLSILGIARD LGAALDLPLKEKHEFEDADGAPGIGRILSVRASDEVSAKFAFRAYEIKGELKLNLKQTLR LASVGILQSCAVQNFINYATHSTGVLLRAYDFEKIASVDGKVALDIKPMPNGEFGVYAGK RLLSVAGICQDAELKACCSSKVVLLEANYTAPLIIAKAVNENKSLKGDEHVYRSSRGSEP KLRLGLDLLFRLLLKNKAVSLYAGTQKISNALEPLIVGFSEKEINSMIGAQIPRDKIVKI LKRLGFDVGVEADLITAKVPPFRHDIVNSHDVCEEIVRIVGIDNIAAAPLSFYEKNRLND TYVSLCNGRKLRSKAAAVGFFECVHYVFDDSKALQSLGFAPCKVKILNPINGELDALRPT LINHLLESAERNLKNSRRSVKLFELGEVFDADGSQCLRLGFIASGLKAEPSIAVGAKPAA VDFLYFANLIQSVIGKFKVRLPGENLKFLSEFEQAQIEQGGEIVGFIGRVDYAVEAGRDL DKSYLCEIDFSKLKFENIVADAYSKFPSVSRDLSILVPSGMRFEQIKQCIDALKIEALKE LIPSDLYSDESLGDSKSLTIRLVFQDLQKTLCDEQVAGFTDKILAALSSELGLGLR >gi|257441256|gb|ACYG01000031.1| GENE 46 60612 - 61607 1211 331 aa, chain - ## HITS:1 COG:Cj0897c KEGG:ns NR:ns ## COG: Cj0897c COG0016 # Protein_GI_number: 15792227 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Campylobacter jejuni # 1 331 1 330 330 480 69.0 1e-135 MQEIKAKIDAAASLGELEAVRLELFGKKGIITQLFAELKSAAPEQKKELAVSANEKRDYF SELIATKKASLEAAEQKEAMKNEAIDVTLFNENVSCGALHPVMETMDKIIDYFIAQNFSV ESGPLIEDDFHNFEALNLPKYHPARDMQDTFYLNDGRLLRTHTSGVQIRTMEKFKAPPVR MIAPGAVFRRDMDLTHTPMFHQVEGLVVEQGDRVSFANLKYVLEEFLRYMFGDVKVRFRP SFFPFTEPSTEVDISCIFCHGEGCRVCKQTGWLEVLGSGVVDPNVFKAVGWKNVSGYAFG LGVERFAMLLHGIPDLRSLFEGDIRLLEQFK >gi|257441256|gb|ACYG01000031.1| GENE 47 61737 - 62093 510 118 aa, chain + ## HITS:1 COG:Cj0898 KEGG:ns NR:ns ## COG: Cj0898 COG0537 # Protein_GI_number: 15792228 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Campylobacter jejuni # 3 118 6 121 121 155 61.0 2e-38 MNVFEKIVNGEIPCNKVLENEEFLAFHDINPKAPIHILAIPKKCYENFQVTPPEVMSKMS AFIQEVTRKMGLDKSGYRLVCNCGENGGQEVMHLHFHILGGMKLPWDRVSDRNTEENF >gi|257441256|gb|ACYG01000031.1| GENE 48 62637 - 63080 688 147 aa, chain - ## HITS:1 COG:Cj1534c KEGG:ns NR:ns ## COG: Cj1534c COG0783 # Protein_GI_number: 15792842 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Campylobacter jejuni # 6 145 5 143 149 143 56.0 9e-35 MSKTVKQLNKLQADAHAFFVAFHDYHWNVKGLQFAQVHAYTEKAYDEMGELFDDMAERAL QIGGKAVTKAKDLIELSKDAPISVKDSYSVSEVLEDVKKAYEYLVKEFKKLQEVAEEEGD DTTSNIAQDHYGDYEKRLWMLSSMLSK >gi|257441256|gb|ACYG01000031.1| GENE 49 63263 - 64165 1116 300 aa, chain + ## HITS:1 COG:Cj1087c KEGG:ns NR:ns ## COG: Cj1087c COG0739 # Protein_GI_number: 15792412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 2 293 8 288 300 258 44.0 1e-68 MITITDLNGSRNFLLSQIIKKIALYLVLFVFTVFVTGALYIRYLGSKIDSLSRTKTELNE LNQKLRDGIAASQMEFEAIEGKISDLEHQFGLDPEEDERAIDRLSHIKTTSEQEIKERAQ KIINEKFSDALIKEIFMQIPNGRVMRTHQLSEKFGWRNHPILKRKQFHPGVDLRTPPKTP IYAPADGIIQYSGAGATGYGNLVEIRHNYGFTTRYAHLDSNLTRKVGEFVNKGDLIAFSG NTGLSTGPHLHYEIRFLQLPLDPLNFINWNEKNYKEIFTKEEDVPWQSLIKAMQTPLKQQ >gi|257441256|gb|ACYG01000031.1| GENE 50 64117 - 64533 597 138 aa, chain + ## HITS:1 COG:jhp1457 KEGG:ns NR:ns ## COG: jhp1457 COG1664 # Protein_GI_number: 15612522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Integral membrane protein CcmA involved in cell shape determination # Organism: Helicobacter pylori J99 # 1 101 1 105 136 81 48.0 5e-16 MAIFNKGDANTAQTTIISSGTLIKGELHLSCILHIDGNVEGDVISDNTVVIGKNGTARGS IRAKHIVISGKFFGNIEAELVELLGGGVLVGDVLSQSFGIEVGAKFNGKSAVSGGDQALV IDGSASEDVKLIDKALGE >gi|257441256|gb|ACYG01000031.1| GENE 51 64797 - 64991 117 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461302|ref|ZP_05626399.1| ## NR: gi|257461302|ref|ZP_05626399.1| hypothetical protein CAMGR0001_2851 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2851 [Campylobacter gracilis RM3268] # 1 64 18 81 81 95 100.0 8e-19 MNSIDTLASLFGNFYNPSFVVDFLAFEKGVDQLKVTYVIAFVIIFVVLAILIDKFMINSK DSKK >gi|257441256|gb|ACYG01000031.1| GENE 52 65589 - 66218 764 209 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461303|ref|ZP_05626400.1| ## NR: gi|257461303|ref|ZP_05626400.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 209 1 209 209 417 100.0 1e-115 MKFWIYGVVLALCCGVFSGCASKNLPGYMQGREHIVAMSAASGGQLRMSGEIYDYVFDAN LSAVRAKVASLASLNKDAIRRNVSMLTIDRYNEGSDAAYIQHEIELVKYDLPLSVQAKLM DDPEQLEPAYSSTFRYSYLIEGKYFKRLKDHDELRRSHRLSVPIEYPARIAVDSGIKSER DAKMDTDIQGLIVMPLMMPVLLLGSILGG >gi|257441256|gb|ACYG01000031.1| GENE 53 66591 - 67808 1120 405 aa, chain - ## HITS:1 COG:FN1140 KEGG:ns NR:ns ## COG: FN1140 COG3581 # Protein_GI_number: 19704475 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 9 402 1 397 407 452 55.0 1e-127 MFAKFTKDMKATHTILIPTMIDPHFRFMQGVLRDEGYKSVLLGENRQNIVEEGLRSVHND MCYPALLVIGQFIDALKSGEFDTHKVALLISQTGGGCRASNYINLLRKALEDSGFSYVPA ISLNFGSLDENEFSLGKKSLLKLFAAIFYGDLMMGLYNQCKPYEKIKNQTNEIYELCAER IKNLTDQRSFFNLKKNFKFILSQFAKIERDDKPRVKVGIVGEIYLKYSPIGNNGLNAYLI RENAEPVNTGLMDFVLTCIYDAVYDKQLYGKGGAAYYGSLAVAKIVEFFQRMMIKQMKRF GFRAPSPFSEVRAAADGYIGHGVKMGEGWLLTAEMVEFMRHGIQNVVCAQPFGCLPNHII ARGMIRKIKQNYPQANIAAIDYDPGASAVNQENRIKLMLANANRK >gi|257441256|gb|ACYG01000031.1| GENE 54 67808 - 70807 2797 999 aa, chain - ## HITS:1 COG:FN1139_1 KEGG:ns NR:ns ## COG: FN1139_1 COG1924 # Protein_GI_number: 19704474 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 19 652 5 639 640 845 63.0 0 MRIRPSKNLFNKERDVIFLGIDVGSTTVKTVVLNEKYEILSKSYERHLAKPKELVLDKIL QIQKTYAGEQFSVAIAGSAGMGIAKNCKIPFVQEVFATSLGVKRMFPKTDVVIELGGEDA KILFLTGGLEERMNGSCAGGTGAFIDQMTNLLHLDITELDRLSFAANKIYPIASRCGVFA KSDIQPLLNQGVRKEDICASIYAAVVEQTISGLAQGREVKGNILFLGGPLFFLKGLQVRF KEVLKLTDETATFPDIAPYFVAYGSALYAKDTGETLNLDETIALLKKEPDRTALEAEPPL FKDRAEFDEFTARHARASVPKVDIHTYSGDAYLGVDCGSTTIKVVLMGANYELLYKFYSS NKGDPVDILLPRLKELYDLCEGRIKIKGSGVTGYGEDLIKTAFRFDYGIVETIAHYSAAR HFNPKVDFIIDIGGQDIKCFSIKDGNIDSIVLNEACSSGCGSFLQTFSNSLGYDIKDFAS LALFATHPAKLGSRCTVFMNSSVKQAQKDGATIEDISAGLAISVIKNAIYKVIRVRNADD LGQNIVVQGGTFLNNAVLRAFEKELGKDVIRLDISELMGAYGAALFAKNNANEHTDMISR AELENFTHRSEFSVCKLCTNKCPLTISYFGDTKFVSGNKCERGAGKEIRHDITNLFEFKN ELLRKYRKPPKQDAPRVGIPFVLNMFEMIPFWSAFFENLGMSVVLSQKPRKETLFLASQS IPSDTVCYPAKSVHGHIYDLLNKSVDFIFYPCMSYSLDENISENCYNCPVVAYYPELIRA NVGALEEKKFLYPHVDLNMQDSFCKTMQAELADAGYKFHSDAVKNAVLQGLKELQNYKNT VLIKGEETLKEIQSSGASAVVLAGRPYHIDKTINHGIDRYLNSLGFIVLSEDALPLSRVQ TKSLNQWTYHARLYSAARFVCKYPRMQLVQLVSFGCGIDAITGDEVRDILRQNGKIYTQL KIDEVTNLGAVKIRLRSLKATMIERERQGAQQEARKDAR >gi|257441256|gb|ACYG01000031.1| GENE 55 71057 - 71413 525 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175495|ref|YP_001408552.1| 50S ribosomal protein L19 [Campylobacter curvus 525.92] # 1 118 1 118 118 206 88 3e-52 MKNKYIQAFEDAQITSKSVPDFRAGDTLKVAIRIKEGDKSRIQNFEGTCIARRGNGVSET FIIRKIGANSVGVERIFPIYSESIESIEVLRKGRVRRAKLFYLRDRRGKAAKIKELRK >gi|257441256|gb|ACYG01000031.1| GENE 56 71410 - 72111 636 233 aa, chain - ## HITS:1 COG:Cj0713 KEGG:ns NR:ns ## COG: Cj0713 COG0336 # Protein_GI_number: 15792062 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Campylobacter jejuni # 1 230 1 234 234 276 58.0 3e-74 MNFIFVSLFENLIAPYFEDSILKRAVDKKIISTHFFNPRNFTTNRYKKVDDYMIGGGAGL LIGTEPLAGTIEQVRAKFKNAKFIYLSPAGKKFNQNDAKRLSDKESLCFICGRYEGIDER IVERYVDEIFCIGDFVLTGGELGALCMCDAISRNIRGVLGNESSLVEESFEGGILEAPAF TKPDVFENLPIVSEFLKGNHAKMRSLKNQMALCKTRFFRPDMYRKIARNKGNL >gi|257441256|gb|ACYG01000031.1| GENE 57 72108 - 72638 515 176 aa, chain - ## HITS:1 COG:Cj0712 KEGG:ns NR:ns ## COG: Cj0712 COG0806 # Protein_GI_number: 15792061 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Campylobacter jejuni # 4 176 5 179 179 166 50.0 2e-41 MPDDLLEVAKLGRTIGLKGAVKIFDRSDFPSQFKKGAKFYLRNGEILEILSFSGANFSAI FKNYESVEAAANLTNQILYRSKEDTRKFCKLQKGEFFYFDIIGLEIYEDGAVLGRVRDIS QIGSGYLFEVETDESLISQTLPKEFFIPYVDAYVKEISLSERKIFTQNARAILENS >gi|257441256|gb|ACYG01000031.1| GENE 58 72631 - 72873 372 80 aa, chain - ## HITS:1 COG:Cj0711 KEGG:ns NR:ns ## COG: Cj0711 COG1837 # Protein_GI_number: 15792060 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Campylobacter jejuni # 1 77 1 78 80 96 67.0 1e-20 MVENFIKEYAKLIADYPQSVSTQKRVGENFTEIIVYADKADTGKLIGKDGKMINAIKTVI IGYKAKDPINYKITVKAKDA >gi|257441256|gb|ACYG01000031.1| GENE 59 72875 - 73105 328 76 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223039455|ref|ZP_03609743.1| ribosomal protein S16 [Campylobacter rectus RM3267] # 1 76 1 76 76 130 81 2e-29 MATVVRLTRIGRKKQPFYRIVVTDSRKRRDGGFIETIGFYNPLKDSDNIKFDAERLAYWK SVGAKLSDRVAQITSK >gi|257441256|gb|ACYG01000031.1| GENE 60 73184 - 74524 1376 446 aa, chain - ## HITS:1 COG:Cj0709 KEGG:ns NR:ns ## COG: Cj0709 COG0541 # Protein_GI_number: 15792058 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Campylobacter jejuni # 1 442 1 444 445 626 77.0 1e-179 MFEIISESFKNAVNKLKTIDDEKALKNALETLKKALLKADVHHKVVKDFLALVEADLRIG TIGQKPFLQSIKTNLTKILTAPRGSSQGFVFASTPPTVALMTGLQGSGKSTSTIKLANYL KLRKKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIEGESDPLKVAQKALSKAKSGLYD VLLVDTAGRLAIDEALMAQLAEMKKALNPHEIFYVADAMSGQDGIKTAAKFDEILGLTGV ILSKFDADTKGGVALGIAQQLGIPLRFIGTGEKVADLEGFIPDRITGRIMGEGDLATLAE KTSAVFDEREAKALNKKIKKGEFNFNDFVNQLESVKKLGNMKNLIGMIPGLSGMANKIKD IDLENSKEILHIKAMINSMTPKERENPDLLNNSRKRRLAVGAGLSQVEVNRFLKQFAGAS KLAKKFSGKGGMQGLASIAQRQNLPR >gi|257441256|gb|ACYG01000031.1| GENE 61 74591 - 75340 169 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 57 226 81 266 287 69 29 5e-11 MQEKAYKLLAAQENISHNEAKALIDAGLVSARGAKIALAREMLGENTKFSVMKPAKPAII YEDENVLAVNKPPFMSSENLEKIYKFGLLNRLDKETSGVVLLYKNEEFREAAIAEFKNLR VKKSYIAIVKGIVSEEMKFGEPILTIKTRSGAFSKISPNGKSAFSEVYPLMVSGKKSLVK VRIETGRTHQIRVHLANAGFGVIGDEKYAKSRAKRMFLHSYETEILGLKFKAPLDKSFNE FGFEIPKDL >gi|257441256|gb|ACYG01000031.1| GENE 62 75340 - 76728 926 462 aa, chain - ## HITS:1 COG:Cj0707 KEGG:ns NR:ns ## COG: Cj0707 COG1519 # Protein_GI_number: 15792056 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Campylobacter jejuni # 3 228 5 228 385 209 50.0 1e-53 MIYTALAFLAWLAAAPFIFILSFKKKYRTSLKARFFLYKNPKFSPAAVHFHACSLGEVNA LAPLISKFESVALSTTTQTGFGAARALTPNSRYLPFENWLPFWLTGSRVLVIFEAELWLN LIRSAKARGSYVILLNARISDRSYASYLRFKFYYRKAFENIDLVLAQSELDAARLRELGA KNIKVAGNVKSANIAVATKDYSAAAASSFVLTISNTHEGEEELILSNLNDFIKFRSSQNA PEKDPRAASTRSDKSLPAAELHGETGSLEPVNLNAASLDTASSSNASSAVPNTAPLNGAS LNFTAPNTATSTAAPQKLKIILAPRHPERFEKVREICEIWAREHGLSFERFSDGAGLGSD FILLDAFGELANFYKISNVVILGGSFLRNIGGHSPIEAASFGVPIISGRFFHNQKALYAL VQNIALCEANEISNALKEPLKGTRIDKICDLKEIENLIKERI >gi|257441256|gb|ACYG01000031.1| GENE 63 76725 - 77432 1136 235 aa, chain - ## HITS:1 COG:Cj0706 KEGG:ns NR:ns ## COG: Cj0706 COG1579 # Protein_GI_number: 15792055 # Func_class: R General function prediction only # Function: Zn-ribbon protein, possibly nucleic acid-binding # Organism: Campylobacter jejuni # 1 235 1 235 238 187 51.0 2e-47 MNKYLSQLVELCEFDKQLDGFKPKIEAAQEKLSKKSTEINGAKEQIETLNAEIAELKSQI LQANAQLSAFSSKLKSTGKKSGAAKTEKEIKALSVEEDIAKEQLEATNEEIERLEKIVAA KETLVKEQSEKQEAFEAELKSLQEQVSAEMGEVEVARGAIYAKRDKLMQAMNPKTVSFYE KIRKWAGNTAVSPVRKQACYGCFMRISDKTYSAVIKSDDIVTCPYCGRILYKEAE >gi|257441256|gb|ACYG01000031.1| GENE 64 77442 - 78164 685 240 aa, chain - ## HITS:1 COG:Cj0705 KEGG:ns NR:ns ## COG: Cj0705 COG0327 # Protein_GI_number: 15792054 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 1 240 1 241 241 239 49.0 5e-63 MKTGEIYEILNATAPFCDAEAWDNSGLMLGNLDDEISKIYLSLDVTSELVREAEADSLFV VHHPLIFSPLKSLDPRLYPANLIYDMIRKNISLIAMHTNFDKHVLNGFVAREILKFEITD EREFLVFMRADLSFEALCAQIKRKLGIEHLRAVKTKNFIRNIALCTGSGSELNQSLGVDC FITGDIKYHAALQNLENGVSLIDINHFESERYFGRALAPFLQKSEIEVIISEQKNPFTYY >gi|257441256|gb|ACYG01000031.1| GENE 65 78170 - 79168 1405 332 aa, chain - ## HITS:1 COG:Cj0704 KEGG:ns NR:ns ## COG: Cj0704 COG0752 # Protein_GI_number: 15792053 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Campylobacter jejuni # 1 278 1 279 287 486 80.0 1e-137 MTFSQIILTLQNYWHEQGCLLVQPYDMPAGAGTYHQATFLRSLGSKPWRAAYVAPSRRPT DGRYGENPNRLGAYYQFQVILKPSPDNIQELYLKSLEKLGLDLKSHDIRFVEDNWESPTL GAWGLGWEVWLDGMEVTQFTYFQQVGGITCELISGEITYGLERLAMYLQNKDDVYDIVWD DKAGLVSYGDVHKRGEFEFSKYNFELADTAMLFSQFENCFGECKSILKHGLALPAYDYCM LAAHTFNVLDARGAISVTQRQDYILKIRDLAKNCALCYADPQKYVAELDAATCSDKKSGK DGGAVDANSTGANLKNAHGKKNAADKADKSEK >gi|257441256|gb|ACYG01000031.1| GENE 66 79436 - 79663 268 75 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_0283 NR:ns ## KEGG: CCV52592_0283 # Name: not_defined # Def: CTA2 subfamily 1 protein # Organism: C.curvus # Pathway: not_defined # 1 73 1 76 158 87 59.0 2e-16 MKILKLSEGFEICGLKTRTNNADEMSGRGVIANLWGEFLKFNASRSSAAKNEIYAAYYDY ENGAQGEYSVLIGTC >gi|257441256|gb|ACYG01000031.1| GENE 67 79667 - 80167 819 166 aa, chain - ## HITS:1 COG:Cj0702 KEGG:ns NR:ns ## COG: Cj0702 COG0041 # Protein_GI_number: 15792051 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Campylobacter jejuni # 1 164 1 164 164 174 68.0 6e-44 MKFVSIIMGSKSDYEVVYEAAKILNEFGAPYEMIVSSAHRSPARTAKYVADAEKKGAQVF ICAAGMAAHLAGAVAANTTKPVLGVPLGGSALSGVDALYSTVQMPAGIPVATLAIGKAGA KNAAYLAVQILALSDEVLSSKLKVDRAAKAEALKKDSEQIEVLLED >gi|257441256|gb|ACYG01000031.1| GENE 68 80164 - 81432 1309 422 aa, chain - ## HITS:1 COG:Cj0701 KEGG:ns NR:ns ## COG: Cj0701 COG0826 # Protein_GI_number: 15792050 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Campylobacter jejuni # 6 421 4 417 417 512 60.0 1e-145 MYLKKPELLAPAGNLTKLKIALAYGADAVYASTGSFSLRQRSAKEFSKESFAQGVAYAHE RGKKLYATVNGFATNGQLGNIERHLEFLRDLRVDGILIATLGVASLARAVAPQIPIHVST QANVLNYLDAQVWAELGAVRIVAAREMTLKDAVQIKDKIPNLEIEIFVHGSMCFAYSGRC LVSAVQSGRFSNRGSCANDCRFNYEIYAKNPETSALFRLQEREGEGTFVMNAKDLSLISH VQKIMQTGAIDSFKIEGRTKSEYYVACATNAYRAAIDDAASDKFEARVYEREIATLKNRG FSDGYLIKRPYEREDTQNLDRSIELGTHQVCAISQDGEFINVKDKILPGESYEIFAPRGF EICACDNEIGEIYELDGKPYLKFKKLQSRSGKEFSEIHSGNLNEIKLPAKLAEFCFLRKE IE >gi|257441256|gb|ACYG01000031.1| GENE 69 81498 - 82286 1183 262 aa, chain + ## HITS:1 COG:DR0470 KEGG:ns NR:ns ## COG: DR0470 COG1387 # Protein_GI_number: 15805497 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Deinococcus radiodurans # 4 257 6 259 260 194 39.0 1e-49 MRADLHNHTYLCNHASGEPRQYLEAAIARGIEIFGFADHAPMNFDQKYRMSFEQMELYER MIRGLRDEFSGRIDVRLGYEVDFMTKKELMDERIFAREVDYLIGSVHFLNNWGFDNEEFL DQWSGREIDDVYREYFALICALCKSGKFDILGHMDLIKIFKFTPKKDIRVLAGGAINAIK KSGIVVELNSAGLRKPANEIYPSDALLEVLADADVPITLSSDAHSVAQVALNYDKIYAKA REFGYERIAVFKNRERQFVNLA >gi|257441256|gb|ACYG01000031.1| GENE 70 82480 - 83907 1909 475 aa, chain + ## HITS:1 COG:Cj0699c KEGG:ns NR:ns ## COG: Cj0699c COG0174 # Protein_GI_number: 15792048 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Campylobacter jejuni # 1 475 1 476 476 749 71.0 0 MGKFVNDVKEFFKFCDENEVEFVDFRFTDLKGTWHHVAYNYKRLPKDFADGIPFDASSVA AWQPIDKSDMMLKPDVATAFLDPFTADVTIIVICDVYDIYKNELYEKCPRSIAKKAEQFL QTTGLGDTCYFGPENEFFIFDDVKIIDDMNCAMFKVDTEEGHWNSGKNYKDGFNSGHRPG VKGGYFPVQPVDSMVDLRAEMLKVLEQIGLETFICHHEVAQGQGEIGVKYGTLVEAADNV QKYKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHVHQSIWKKGKNTFYKKGNYANLSDAA RWYIGGVLKHARSVAAFTNPSTNSYKRLIPGFEAPSILTYSSQNRSASIRIPYGSGEHSV RAEMRFPDSTACPYLAFAAMLMAGIDGIKNKTEPVGPMDENLFKLHLDEIRERGIEQLPH TLRGSLEAVIRDNEYLRPIMSELFIETYQHFKFETQVWPYEARPTPFEFATNYSC >gi|257441256|gb|ACYG01000031.1| GENE 71 84121 - 85290 728 389 aa, chain + ## HITS:1 COG:Cj1211 KEGG:ns NR:ns ## COG: Cj1211 COG0658 # Protein_GI_number: 15792535 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Campylobacter jejuni # 12 388 43 417 419 214 40.0 2e-55 MKFYEFKEFRAKNYAFYDAQILNAYTKTNERGRTYTVLKLKTADFTLYTTAGLGREFHRF ARVNIGIVTKNVKFLDFLKQRFYAPNFKISAETAPSGAKWRAISFVRAQHEDEMTADLYS ALYFATEISKPLRASVTNWGIAHIISISGFHLGIIFSTVFLLAMPIYRYFQDRYFPYRSA KRDLSVFVIVLMSGYLFVLDFTPSFLRSLAMCCVGFYLAMRNFYVVKFTNLFLTIALLLA FFPHLAFSIGFYFSCLGVLYIFLYLHHFAPKFKLWQNVILFNLYVWLSMNVAVYYFFPTA SLQQLSVMPLGYVFVIFYPLSIFLHLFGLGGALDTPLLAFLNFALPSFQAQIPPLLFALA NICALAAIKLRYAALGCAIIGISPIFFIT >gi|257441256|gb|ACYG01000031.1| GENE 72 85370 - 85660 393 96 aa, chain + ## HITS:1 COG:CAP0038 KEGG:ns NR:ns ## COG: CAP0038 COG2350 # Protein_GI_number: 15004742 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 90 1 90 96 95 47.0 2e-20 MFIANLTYVKEISEVDRFINEHNAFLDRFYAADKFICSGRKVPRTGGIILINAKDRTELD EIIAQDPFFQNGVAKYEIIEFAPTKFAPEFWRLFGE >gi|257441256|gb|ACYG01000031.1| GENE 73 85836 - 86609 582 257 aa, chain + ## HITS:1 COG:L19745 KEGG:ns NR:ns ## COG: L19745 COG1247 # Protein_GI_number: 15673759 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Lactococcus lactis # 117 229 54 161 187 97 42.0 3e-20 MLIKLRLAKPQDADALLEIYAPYVKQTAISFEYDVPSTAEFAERIEQTLQRYPYLLAYAS DEAACANDERNENFKISASAAGAGSEILPADEARNRASAAAKQNSANLIASAKQSGVNLK HRQILGYAYASAFKERAAYDWSAESSVYVSQNVRALGIGRLLYEALQRALKAQNIADMNA CIACGDDEYLNDASVRFHERMGFRFVGKFERCAYKFGRWYDMAWMQKPIGEHLQNQPTMR PFARFRDEICASADIEI >gi|257441256|gb|ACYG01000031.1| GENE 74 86625 - 87470 977 281 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0756 NR:ns ## KEGG: CCV52592_0756 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 276 1 246 251 125 34.0 2e-27 MTHFIIDDENIDVDNIFDVVNLKEGDELNIVSNTAKKIGALTLARLSKMGVSIGEVFTIG KQRKDFADKIIVFLMGKLCGAEGKIGIVSNDKFYDDVIEFFNNLNYRKNPKFEKISLTSH AVGASAKQSKTNGAAEKKAEKPEPKTAKREPKAQKQGTKAAKREPKAANSKISKIELAAA EALIPQCVSLQALYAACVAKLGRAKGCEAYREIKDGARARYASIAYDSDLKDGAVRRNAI KLYRESGGDMAEFHNKLTSEYKHAGPEIYKEFKEKLVGKMI >gi|257441256|gb|ACYG01000031.1| GENE 75 87732 - 88121 372 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257458973|ref|ZP_05624093.1| ## NR: gi|257458973|ref|ZP_05624093.1| putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] putative phytanoyl-CoA dioxygenase [Campylobacter gracilis RM3268] # 1 129 1 128 128 169 74.0 9e-41 MQINGKEIFEKGALMCRLSRMASLEYQVKYLVHATAEYYEDPSEMAELLCDECWRALDEK FEFCFLPYEREILKELAELIYKYFKDQSLLEGDTYDYLVYQNKSWIEVRELALKTLHIFG YDLGDFDYD >gi|257441256|gb|ACYG01000031.1| GENE 76 88214 - 88486 287 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461332|ref|ZP_05626429.1| ## NR: gi|257461332|ref|ZP_05626429.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 90 1 90 90 142 100.0 7e-33 MIEEYIKIIEDFLQNRIDVFEFEKIYWDKFMNDKNFPDEYYEPLNRLLTDIDEFEPDEEL RGDDTVGDSLSEEDLRECAKRALKQIALLK >gi|257441256|gb|ACYG01000031.1| GENE 77 88508 - 88780 312 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461333|ref|ZP_05626430.1| ## NR: gi|257461333|ref|ZP_05626430.1| hypothetical protein CAMGR0001_2883 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2883 [Campylobacter gracilis RM3268] # 1 90 1 90 90 168 100.0 2e-40 MRYNDPIFLNLFRNYEDEFAGVGRRDFVIYLEELLRAGEYGIALEDFLVQMYEYDIKISS NDLTIIKNLCEGVNVDSNLWLVLSIKAAGD >gi|257441256|gb|ACYG01000031.1| GENE 78 88827 - 89306 473 159 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1692 NR:ns ## KEGG: CCC13826_1692 # Name: not_defined # Def: serine hydroxymethyltransferase (serine methylase; ShmT) (EC:2.1.2.1) # Organism: C.concisus # Pathway: not_defined # 1 159 1 153 153 142 52.0 5e-33 MIEVVIDFDELQKDRRYIDERHDYCPKEIEHKLYSYLSEKLSLPLRIGPDAFADFFWFLR FKEWKDYSEEEWEQYKDKDEWESYSEYIQEKEENSRYGLKSKQGVRDDLKLIFLNFNAFK KKYSDLTKQLLDVIKFTLSETAKYPDNDDLLDIQIEIRS >gi|257441256|gb|ACYG01000031.1| GENE 79 89642 - 89959 282 105 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_1677 NR:ns ## KEGG: CCC13826_1677 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 93 1 93 188 85 46.0 6e-16 MYKQIKELLEKSGIELSEGLKESEIDKIEQIYEFKFPKSLRDFLSYTLPISVEFYNWRDF SDENIKEIKQAMNYVFEYLKNDPIDEIFPNENYWNTQKWGPMPED >gi|257441256|gb|ACYG01000031.1| GENE 80 89985 - 90296 269 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461336|ref|ZP_05626433.1| ## NR: gi|257461336|ref|ZP_05626433.1| hypothetical protein CAMGR0001_2886 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2886 [Campylobacter gracilis RM3268] # 11 103 1 93 93 162 98.0 7e-39 MLNPTKDKYLLCIDLIEDCESACKIALAESNKIYFSIEERKAIAKMLDKFTECDSKFWEE EERASMADYEDFIYHNSTFCELRELALETIHIFGYDLGDLNYD >gi|257441256|gb|ACYG01000031.1| GENE 81 90391 - 91002 475 203 aa, chain - ## HITS:1 COG:no KEGG:CJE1136 NR:ns ## KEGG: CJE1136 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_RM1221 # Pathway: not_defined # 82 202 108 240 248 68 35.0 1e-10 MRIKALDLNLSPYVYFFSEAEDFRFKIFKDFQAASGKRSLDFYELEAFSLMKSTEVYETD SIASTLIHNFSLCDENVRDILIMLFGQFYLNNFIDTDIKYKTSANINLNIRKFEEWKILR ENFFYNLDKFIARPYEPLKNYTHADGAFWEEPNRWCHHNMYIFITECGKKYYDEILIPSL YNKYKHIEVDTDKEGNATKWYGI >gi|257441256|gb|ACYG01000031.1| GENE 82 91034 - 91372 286 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461338|ref|ZP_05626435.1| ## NR: gi|257461338|ref|ZP_05626435.1| hypothetical protein CAMGR0001_2888 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2888 [Campylobacter gracilis RM3268] # 1 112 1 112 112 214 100.0 2e-54 MNKKAFLIILSVIIEDGDYVSLWEIVWELNSINVVNSLKVAKEILLFLCEQGYIRLFSSN WGYDTETKEICNKSEILNILRDDKNYEPVGVNSKYFCVTETQQGRAYYAKQG >gi|257441256|gb|ACYG01000031.1| GENE 83 91398 - 91793 363 131 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461339|ref|ZP_05626436.1| ## NR: gi|257461339|ref|ZP_05626436.1| hypothetical protein CAMGR0001_2889 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2889 [Campylobacter gracilis RM3268] # 1 131 1 131 131 238 100.0 1e-61 MQIDGKHIFRKGVLLYKLCVMASLEYQDKYLVHATDEDCENPKEMVYFLCDSCANALLEK FEFCFLPYERDALRELKSFILKNFKDDRSLYVDDYEYLVYHNKSWIEVRELALKTIHIFG YDLDDFSYDFN >gi|257441256|gb|ACYG01000031.1| GENE 84 92233 - 93396 870 387 aa, chain - ## HITS:1 COG:no KEGG:XBJ1_0293 NR:ns ## KEGG: XBJ1_0293 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 1 195 1 194 195 125 37.0 5e-27 MKKLLNLTNNSLKLSDINFSSFSASKNWIGFFEIESRGWLSGVSLAIKLFDNFFRKYSDE VFIVSALMCDDKVYKKYKAISQVKPLYDKFKDLGILQEQNEYFSLTRDKEYPLPAMCVRM DILKWNDIKELAKFLMCYDYSINEWCFIVFPSLNLAVYPHDSKGFGCIGLNDEIKYGINF LKFCEKNSKAKVTIDKKEVNLNKAVFLLPKNNEELFSRVQEVREIKRGTLYADPNLIKFI ALSGSIKDLKISQLKQLLREGLIYLDTGIFFIKNLKRERIATTENILINSSIYQGLSDFE WSINEVEIKNPNLKEDDFIKECLLFLKLVKEKIENMNIENSRFALCLDFYNIDELSADFE LYTLRDNEKIVDFSETKFNQSSVYVIV >gi|257441256|gb|ACYG01000031.1| GENE 85 93471 - 93860 216 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461342|ref|ZP_05626439.1| ## NR: gi|257461342|ref|ZP_05626439.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 129 1 129 129 232 100.0 6e-60 MNLVNFYRNTAFDDRYDANSFIGMILDYNLWSDDEYWKLEADLKKILQHYKNKELDPEIM QGIISISNDIFLNGSWRDVDIDAKSECFKTYEYQEDTKPNIFDRFRRIKSLLLAVASGDE NFYKIKFFY >gi|257441256|gb|ACYG01000031.1| GENE 86 93865 - 94251 366 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461343|ref|ZP_05626440.1| ## NR: gi|257461343|ref|ZP_05626440.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 128 1 128 128 247 100.0 3e-64 MDLELLYRNSTNSDKFSINSFVGKFIYQKTWSDCDYWKLDKTLMQILSFYHNKTLPREIF VAIIAIFNDVIGVEDKSEIYVSNILCAKNSDGVVPRIYDRFERLNVLCNSIVFKEEFSNS GFWYVPKD Prediction of potential genes in microbial genomes Time: Wed Jun 29 08:04:19 2011 Seq name: gi|257441067|gb|ACYG01000032.1| Campylobacter gracilis RM3268 contig00021, whole genome shotgun sequence Length of sequence - 154447 bp Number of predicted genes - 159, with homology - 155 Number of transcription units - 59, operones - 34 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 56 - 115 5.5 1 1 Tu 1 . + CDS 234 - 746 18 ## - Term 842 - 886 4.0 2 2 Tu 1 . - CDS 979 - 2046 1324 ## COG0225 Peptide methionine sulfoxide reductase - Prom 2194 - 2253 5.6 - Term 3594 - 3628 -0.9 3 3 Op 1 . - CDS 3630 - 5168 1818 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 4 3 Op 2 . - CDS 5165 - 5629 270 ## gi|257461354|ref|ZP_05626450.1| hypothetical protein CAMGR0001_1921 5 3 Op 3 . - CDS 5626 - 6408 531 ## SO_1732 cold shock domain-contain protein 6 3 Op 4 . - CDS 6425 - 7015 721 ## gi|257461356|ref|ZP_05626452.1| hypothetical protein CAMGR0001_1923 - Prom 7154 - 7213 4.9 - Term 7210 - 7276 4.2 7 4 Op 1 . - CDS 7507 - 8538 1276 ## COG0616 Periplasmic serine proteases (ClpP class) 8 4 Op 2 . - CDS 8565 - 9188 516 ## gi|257461358|ref|ZP_05626454.1| putative lipoprotein 9 4 Op 3 . - CDS 9203 - 9820 435 ## gi|257461359|ref|ZP_05626455.1| putative lipoprotein 10 4 Op 4 . - CDS 9837 - 10478 396 ## gi|257461360|ref|ZP_05626456.1| putative lipoprotein - Prom 10526 - 10585 1.8 - Term 10532 - 10568 -0.5 11 5 Tu 1 . - CDS 10587 - 11474 937 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 12 6 Op 1 . - CDS 11571 - 13766 2711 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 13 6 Op 2 3/0.000 - CDS 13831 - 14586 893 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 14 6 Op 3 . - CDS 14583 - 15374 804 ## COG0726 Predicted xylanase/chitin deacetylase 15 6 Op 4 . - CDS 15371 - 16615 655 ## gi|257461365|ref|ZP_05626461.1| O-antigen polymerase family protein - Prom 16696 - 16755 5.5 - Term 16731 - 16774 3.0 16 7 Tu 1 . - CDS 16931 - 17164 301 ## gi|257461366|ref|ZP_05626462.1| hypothetical protein CAMGR0001_1933 - Prom 17205 - 17264 3.0 17 8 Op 1 6/0.000 - CDS 17283 - 18515 994 ## COG0438 Glycosyltransferase 18 8 Op 2 . - CDS 18512 - 19333 927 ## COG0726 Predicted xylanase/chitin deacetylase 19 8 Op 3 . - CDS 19330 - 19512 142 ## gi|257461369|ref|ZP_05626465.1| hypothetical protein CAMGR0001_1936 20 8 Op 4 . - CDS 19509 - 20585 1040 ## COG0438 Glycosyltransferase 21 8 Op 5 . - CDS 20582 - 22021 874 ## CHAB381_0656 hypothetical protein 22 8 Op 6 . - CDS 22006 - 22887 828 ## COG1560 Lauroyl/myristoyl acyltransferase 23 8 Op 7 . - CDS 22947 - 24695 1040 ## COG0486 Predicted GTPase 24 8 Op 8 . - CDS 24698 - 25453 824 ## CHAB381_0653 hypothetical protein 25 8 Op 9 18/0.000 - CDS 25450 - 26985 1502 ## COG0706 Preprotein translocase subunit YidC - Prom 27023 - 27082 4.8 26 8 Op 10 . - CDS 27093 - 27431 96 ## COG0759 Uncharacterized conserved protein - Prom 27512 - 27571 6.1 27 9 Op 1 . - CDS 27751 - 27885 209 ## PROTEIN SUPPORTED gi|157163975|ref|YP_001466644.1| 50S ribosomal protein L34 28 9 Op 2 . - CDS 27961 - 28314 301 ## gi|257461379|ref|ZP_05626475.1| hypothetical protein CAMGR0001_1946 29 9 Op 3 3/0.000 - CDS 28316 - 29674 398 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 30 9 Op 4 13/0.000 - CDS 29688 - 31616 397 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 31 9 Op 5 1/0.333 - CDS 31638 - 32819 1325 ## COG0845 Membrane-fusion protein 32 9 Op 6 . - CDS 32884 - 33753 876 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 33850 - 33909 12.8 + Prom 33823 - 33882 8.2 33 10 Op 1 1/0.333 + CDS 33905 - 35206 1584 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 34 10 Op 2 . + CDS 35199 - 36380 1561 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 35 10 Op 3 . + CDS 36414 - 37061 707 ## COG0020 Undecaprenyl pyrophosphate synthase + Term 37073 - 37104 -0.1 + Prom 37090 - 37149 5.5 36 11 Op 1 . + CDS 37291 - 37716 246 ## gi|257461388|ref|ZP_05626484.1| hypothetical protein CAMGR0001_1955 37 11 Op 2 1/0.333 + CDS 37782 - 38537 952 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 38 11 Op 3 . + CDS 38530 - 39561 1110 ## COG0795 Predicted permeases 39 11 Op 4 . + CDS 39545 - 40414 288 ## 40 11 Op 5 . + CDS 40324 - 40935 365 ## COG0101 Pseudouridylate synthase + Prom 41064 - 41123 5.8 41 12 Op 1 8/0.000 + CDS 41169 - 42110 1259 ## COG2358 TRAP-type uncharacterized transport system, periplasmic component 42 12 Op 2 . + CDS 42119 - 44200 2051 ## COG4666 TRAP-type uncharacterized transport system, fused permease components + Term 44211 - 44253 8.1 + Prom 44684 - 44743 10.2 43 13 Op 1 1/0.333 + CDS 44873 - 46996 2002 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins 44 13 Op 2 . + CDS 46990 - 47892 582 ## COG2819 Predicted hydrolase of the alpha/beta superfamily 45 14 Tu 1 . + CDS 48062 - 48310 373 ## gi|257461397|ref|ZP_05626493.1| hypothetical protein CAMGR0001_1964 + Prom 48315 - 48374 4.4 46 15 Op 1 23/0.000 + CDS 48514 - 48972 422 ## COG1380 Putative effector of murein hydrolase LrgA 47 15 Op 2 . + CDS 48984 - 49661 701 ## COG1346 Putative effector of murein hydrolase 48 15 Op 3 . + CDS 49671 - 50237 872 ## EUBELI_00438 cytidylate kinase + Term 50259 - 50302 8.7 + Prom 50336 - 50395 7.3 49 16 Op 1 . + CDS 50499 - 51890 1478 ## CCC13826_0383 putative cytochrome c family protein + Prom 51893 - 51952 7.2 50 16 Op 2 . + CDS 51975 - 53033 1334 ## CCC13826_1328 hypothetical protein 51 17 Tu 1 . + CDS 53827 - 54063 145 ## FN0968 hypothetical protein - Term 54205 - 54234 -0.3 52 18 Op 1 3/0.000 - CDS 54254 - 55396 1147 ## COG0294 Dihydropteroate synthase and related enzymes 53 18 Op 2 . - CDS 55393 - 56013 498 ## COG0470 ATPase involved in DNA replication 54 18 Op 3 . - CDS 56010 - 56543 791 ## CCV52592_1569 hypothetical protein 55 18 Op 4 3/0.000 - CDS 56543 - 57748 1527 ## COG0527 Aspartokinases 56 18 Op 5 . - CDS 57748 - 58218 480 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 58240 - 58299 7.3 + Prom 58238 - 58297 8.5 57 19 Op 1 1/0.333 + CDS 58355 - 59428 900 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 58 19 Op 2 28/0.000 + CDS 59486 - 60208 974 ## COG1826 Sec-independent protein secretion pathway components 59 19 Op 3 3/0.000 + CDS 60224 - 60979 912 ## COG0805 Sec-independent protein secretion pathway component TatC 60 19 Op 4 . + CDS 60981 - 62000 938 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 61 19 Op 5 . + CDS 61997 - 63034 1058 ## gi|257461415|ref|ZP_05626511.1| hypothetical protein CAMGR0001_1982 62 19 Op 6 . + CDS 63074 - 63526 289 ## gi|257461416|ref|ZP_05626512.1| hypothetical protein CAMGR0001_1983 - Term 63792 - 63830 3.2 63 20 Op 1 . - CDS 63856 - 64350 425 ## gi|257461418|ref|ZP_05626514.1| hypothetical protein CAMGR0001_1985 - Prom 64381 - 64440 5.5 - Term 64407 - 64446 1.6 64 20 Op 2 . - CDS 64449 - 64745 322 ## - Prom 64768 - 64827 10.7 65 21 Op 1 21/0.000 - CDS 64864 - 65124 416 ## PROTEIN SUPPORTED gi|154148306|ref|YP_001405849.1| 30S ribosomal protein S18 66 21 Op 2 24/0.000 - CDS 65138 - 65731 663 ## COG0629 Single-stranded DNA-binding protein 67 21 Op 3 2/0.000 - CDS 65742 - 66155 529 ## PROTEIN SUPPORTED gi|154148390|ref|YP_001405847.1| 30S ribosomal protein S6 68 21 Op 4 3/0.000 - CDS 66240 - 67244 1118 ## COG1466 DNA polymerase III, delta subunit 69 21 Op 5 . - CDS 67244 - 69169 547 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 70 21 Op 6 . - CDS 69163 - 70425 924 ## CHAB381_0373 hypothetical protein - Prom 70452 - 70511 6.7 + Prom 70707 - 70766 6.1 71 22 Tu 1 . + CDS 70893 - 72017 944 ## gi|257461426|ref|ZP_05626522.1| hypothetical protein CAMGR0001_1993 + Term 72194 - 72226 -0.6 + Prom 72174 - 72233 4.4 72 23 Op 1 . + CDS 72300 - 73259 474 ## gi|257461427|ref|ZP_05626523.1| hypothetical protein CAMGR0001_1994 73 23 Op 2 . + CDS 73246 - 73521 294 ## APP7_1051 RTX toxin protein + Term 73559 - 73594 -0.2 + Prom 73552 - 73611 3.4 74 24 Op 1 . + CDS 73773 - 74438 412 ## gi|257461430|ref|ZP_05626526.1| conserved hypothetical protein 75 24 Op 2 . + CDS 74450 - 74602 110 ## gi|257461431|ref|ZP_05626527.1| hypothetical protein CAMGR0001_1999 - Term 74438 - 74477 1.5 76 25 Op 1 . - CDS 74595 - 75296 498 ## COG3676 Transposase and inactivated derivatives 77 25 Op 2 . - CDS 75235 - 75678 281 ## - Prom 75703 - 75762 7.2 - TRNA 75929 - 76013 59.6 # Leu GAG 0 0 - Term 76050 - 76076 -1.0 78 26 Tu 1 . - CDS 76084 - 76422 435 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K - Prom 76499 - 76558 3.2 79 27 Op 1 1/0.333 - CDS 76580 - 78094 1901 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 78118 - 78177 7.4 80 27 Op 2 . - CDS 78179 - 78928 711 ## COG1183 Phosphatidylserine synthase - Prom 78987 - 79046 2.6 81 28 Op 1 3/0.000 - CDS 79055 - 81004 1232 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 82 28 Op 2 . - CDS 81001 - 81864 864 ## PROTEIN SUPPORTED gi|154148737|ref|YP_001406076.1| ribosomal protein L11 methyltransferase 83 28 Op 3 25/0.000 - CDS 81943 - 82650 850 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 84 28 Op 4 . - CDS 82650 - 83309 583 ## COG0118 Glutamine amidotransferase 85 28 Op 5 7/0.000 - CDS 83351 - 85156 1900 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 86 28 Op 6 9/0.000 - CDS 85156 - 86253 1326 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - Prom 86295 - 86354 2.3 - Term 86266 - 86304 7.0 87 28 Op 7 3/0.000 - CDS 86370 - 86969 650 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 88 28 Op 8 12/0.000 - CDS 86956 - 87561 677 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 89 28 Op 9 3/0.000 - CDS 87554 - 88681 950 ## COG0438 Glycosyltransferase 90 28 Op 10 3/0.000 - CDS 88755 - 91535 2255 ## COG1287 Uncharacterized membrane protein, required for N-linked glycosylation 91 28 Op 11 25/0.000 - CDS 91538 - 92656 1203 ## COG0438 Glycosyltransferase - Prom 92715 - 92774 2.0 92 28 Op 12 26/0.000 - CDS 92902 - 93945 1154 ## COG0438 Glycosyltransferase 93 28 Op 13 26/0.000 - CDS 93942 - 95207 721 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 94 28 Op 14 . - CDS 95207 - 96286 978 ## COG0438 Glycosyltransferase 95 28 Op 15 . - CDS 96288 - 97349 921 ## CHAB381_0960 putative WfaX 96 28 Op 16 . - CDS 97346 - 98968 807 ## COG1035 Coenzyme F420-reducing hydrogenase, beta subunit 97 28 Op 17 . - CDS 98965 - 100503 1320 ## CHAB381_0962 virulence factor MviN family protein 98 28 Op 18 . - CDS 100585 - 101574 1316 ## COG1087 UDP-glucose 4-epimerase 99 28 Op 19 . - CDS 101627 - 102481 1022 ## COG1793 ATP-dependent DNA ligase 100 28 Op 20 . - CDS 102471 - 103835 1363 ## COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB - Prom 103969 - 104028 4.6 - Term 103997 - 104031 -0.8 101 29 Op 1 . - CDS 104091 - 104435 208 ## gi|257461457|ref|ZP_05626553.1| hypothetical protein CAMGR0001_2024 102 29 Op 2 3/0.000 - CDS 104457 - 105284 1123 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) - Prom 105427 - 105486 5.4 - Term 105330 - 105378 -0.3 103 29 Op 3 13/0.000 - CDS 105578 - 106291 706 ## COG0149 Triosephosphate isomerase 104 29 Op 4 26/0.000 - CDS 106288 - 107499 1175 ## COG0126 3-phosphoglycerate kinase 105 29 Op 5 . - CDS 107501 - 108505 1115 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 108532 - 108591 5.2 + Prom 108563 - 108622 7.6 106 30 Tu 1 . + CDS 108643 - 109020 481 ## CCV52592_1000 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.-) + Term 109028 - 109085 5.1 + Prom 109144 - 109203 3.4 107 31 Tu 1 . + CDS 109262 - 109705 461 ## gi|257461464|ref|ZP_05626560.1| hypothetical protein CAMGR0001_2032 + Term 109740 - 109783 -0.8 108 32 Op 1 . - CDS 109807 - 110088 220 ## gi|257461465|ref|ZP_05626561.1| hypothetical protein CAMGR0001_2033 109 32 Op 2 . - CDS 110085 - 110816 442 ## CA_C0843 ribonuclease precursor (barnase), secreted 110 32 Op 3 . - CDS 110819 - 111382 590 ## COG0586 Uncharacterized membrane-associated protein - Prom 111556 - 111615 7.1 - Term 111586 - 111628 3.2 111 33 Op 1 . - CDS 111864 - 112445 760 ## COG2930 Uncharacterized conserved protein 112 33 Op 2 4/0.000 - CDS 112456 - 114009 2058 ## COG1418 Predicted HD superfamily hydrolase 113 33 Op 3 . - CDS 113942 - 114559 430 ## COG0212 5-formyltetrahydrofolate cyclo-ligase - Prom 114584 - 114643 8.1 + Prom 114561 - 114620 8.6 114 34 Op 1 1/0.333 + CDS 114640 - 115221 725 ## COG0526 Thiol-disulfide isomerase and thioredoxins 115 34 Op 2 . + CDS 115221 - 116084 474 ## PROTEIN SUPPORTED gi|157804145|ref|YP_001492694.1| 50S ribosomal protein L32 + Term 116272 - 116329 -0.9 - Term 116712 - 116745 2.1 116 35 Tu 1 . - CDS 116764 - 118095 1320 ## COG1114 Branched-chain amino acid permeases - Prom 118228 - 118287 9.0 117 36 Tu 1 . + CDS 118306 - 119655 1580 ## COG1066 Predicted ATP-dependent serine protease + Term 119726 - 119782 -0.8 + Prom 120325 - 120384 4.5 118 37 Tu 1 . + CDS 120406 - 121149 895 ## gi|257461483|ref|ZP_05626579.1| putative membrane protein 119 38 Op 1 9/0.000 - CDS 121381 - 122187 929 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 120 38 Op 2 9/0.000 - CDS 122205 - 123011 1020 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 123064 - 123123 6.2 - Term 123396 - 123440 2.2 121 38 Op 3 . - CDS 123441 - 124247 915 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 124268 - 124327 3.1 122 39 Tu 1 . - CDS 124420 - 125115 894 ## COG0692 Uracil DNA glycosylase - Prom 125144 - 125203 5.2 123 40 Tu 1 . - CDS 125252 - 125470 194 ## gi|257461488|ref|ZP_05626584.1| hypothetical protein CAMGR0001_2056 - Prom 125568 - 125627 5.4 - Term 125526 - 125567 -0.8 124 41 Op 1 . - CDS 125637 - 126251 371 ## gi|257461489|ref|ZP_05626585.1| hypothetical protein CAMGR0001_2057 125 41 Op 2 . - CDS 126331 - 126927 709 ## COG0693 Putative intracellular protease/amidase - Prom 127058 - 127117 4.4 - Term 127056 - 127123 14.4 126 42 Op 1 . - CDS 127150 - 127896 664 ## gi|257461491|ref|ZP_05626587.1| hypothetical protein CAMGR0001_2059 127 42 Op 2 . - CDS 127932 - 128570 765 ## COG1351 Predicted alternative thymidylate synthase - Prom 128590 - 128649 5.9 128 43 Tu 1 . - CDS 128697 - 129323 482 ## COG0778 Nitroreductase - Prom 129432 - 129491 3.1 + Prom 129288 - 129347 5.3 129 44 Tu 1 . + CDS 129445 - 130794 1545 ## COG0733 Na+-dependent transporters of the SNF family + Term 131029 - 131072 0.5 + Prom 131222 - 131281 5.3 130 45 Tu 1 . + CDS 131311 - 132654 1499 ## COG0733 Na+-dependent transporters of the SNF family + Term 132846 - 132889 1.2 131 46 Tu 1 . - CDS 133138 - 133506 338 ## gi|311697103|gb|ADP99975.1| conserved hypothetical protein, secreted - Prom 133530 - 133589 9.6 - Term 133913 - 133946 -0.4 132 47 Tu 1 . - CDS 134041 - 135387 1723 ## COG1158 Transcription termination factor 133 48 Op 1 3/0.000 - CDS 135449 - 136387 1007 ## COG0825 Acetyl-CoA carboxylase alpha subunit 134 48 Op 2 27/0.000 - CDS 136387 - 137574 968 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 135 48 Op 3 22/0.000 - CDS 137623 - 137859 451 ## COG0236 Acyl carrier protein 136 48 Op 4 1/0.333 - CDS 137928 - 138671 216 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 138712 - 138771 4.0 137 49 Tu 1 . - CDS 138774 - 140240 1630 ## COG0696 Phosphoglyceromutase - Prom 140313 - 140372 6.6 + Prom 140399 - 140458 6.6 138 50 Op 1 . + CDS 140545 - 141504 973 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 139 50 Op 2 . + CDS 141506 - 142030 595 ## CCC13826_0565 hypothetical protein 140 50 Op 3 . + CDS 142027 - 143502 1399 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase - Term 143443 - 143470 -0.1 141 51 Tu 1 . - CDS 143676 - 144833 1141 ## COG3596 Predicted GTPase - Prom 145018 - 145077 79.3 + TRNA 145001 - 145076 85.4 # Phe GAA 0 0 + Prom 145430 - 145489 1.6 142 52 Op 1 12/0.000 + CDS 145519 - 146007 456 ## COG0582 Integrase 143 52 Op 2 . + CDS 146046 - 146762 234 ## PROTEIN SUPPORTED gi|239524421|gb|EEQ64287.1| 30S ribosomal protein S15 144 52 Op 3 . + CDS 146771 - 147469 490 ## gi|257461514|ref|ZP_05626610.1| hypothetical protein CAMGR0001_2083 + Term 147474 - 147527 0.0 + Prom 147580 - 147639 4.3 145 53 Op 1 . + CDS 147677 - 147883 268 ## gi|257461515|ref|ZP_05626611.1| conserved hypothetical protein 146 53 Op 2 . + CDS 147867 - 148331 386 ## gi|257461516|ref|ZP_05626612.1| hypothetical protein CAMGR0001_2085 147 53 Op 3 . + CDS 148318 - 148554 307 ## gi|257461517|ref|ZP_05626613.1| hypothetical protein CAMGR0001_2086 148 53 Op 4 . + CDS 148551 - 148817 298 ## gi|257461518|ref|ZP_05626614.1| putative beta-lactamase HcpC + Prom 148908 - 148967 2.5 149 54 Tu 1 . + CDS 149039 - 149578 401 ## CCC13826_0309 aspartate carbamoyltransferase (aspartatetranscarbamylase; ATCase) (EC:2.1.3.2) 150 55 Tu 1 . + CDS 150231 - 150458 335 ## gi|257461522|ref|ZP_05626618.1| hypothetical protein CAMGR0001_2091 151 56 Tu 1 . - CDS 151028 - 151231 243 ## CHAB381_1465 hypothetical protein - Prom 151257 - 151316 5.1 + Prom 151278 - 151337 10.6 152 57 Op 1 . + CDS 151377 - 151637 320 ## gi|257461524|ref|ZP_05626620.1| conserved hypothetical protein 153 57 Op 2 . + CDS 151639 - 152085 576 ## gi|257461525|ref|ZP_05626621.1| conserved hypothetical protein 154 57 Op 3 . + CDS 152078 - 152452 382 ## gi|257461526|ref|ZP_05626622.1| hypothetical protein CAMGR0001_2096 + Prom 152458 - 152517 2.8 155 58 Op 1 . + CDS 152538 - 152729 181 ## gi|257461528|ref|ZP_05626624.1| conserved hypothetical protein 156 58 Op 2 . + CDS 152726 - 153175 366 ## CCC13826_0303 co-chaperone protein GrpE 157 58 Op 3 . + CDS 153238 - 153504 197 ## gi|257461530|ref|ZP_05626626.1| hypothetical protein CAMGR0001_2099 + Prom 153540 - 153599 4.6 158 59 Op 1 . + CDS 153623 - 153871 414 ## gi|257461531|ref|ZP_05626627.1| hypothetical protein CAMGR0001_2100 159 59 Op 2 . + CDS 153852 - 154130 264 ## CFF8240_1705 plasmid stabilization system protein Predicted protein(s) >gi|257441067|gb|ACYG01000032.1| GENE 1 234 - 746 18 170 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFKQCEPKFHPRHGFSVARSFWQRCDRSRTLLKFYSEPPSPRLNSIAQILPSAKAEDEP PPLCLNSAAPTDRRPAPGSVTSSVAGPIGSKPAAKPKQLARANDLAKPTRTAADKPVVKP RDRRSRRTAEAPDRSSIWFQNRLVRQMSRPINNPSRKSPTDCNPSGLIRK >gi|257441067|gb|ACYG01000032.1| GENE 2 979 - 2046 1324 355 aa, chain - ## HITS:1 COG:HI1455_1 KEGG:ns NR:ns ## COG: HI1455_1 COG0225 # Protein_GI_number: 16273361 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Haemophilus influenzae # 1 208 1 205 205 202 47.0 9e-52 MKISKVLICLFALAAGYLVALNAADGGSAADANFKVKGGGMNANVKEIYLAGGCFWGMEA YFKQLDGVVATQVGYANGKSDKASYEGLHSSDHAETLMLKFDANVISEPEILAHYFRIID PFSIDKQGNDRGRQYRTGIYYADEASGELARFFIAAQQAKFKEKIAVEVAPLKNFVRAEE YHQDYLGKNPGGYCHIDLRLAKKPLEDDEKFKVQSKEELKKNLTELQYQVTQEKATERPF SSEYDKNYKKGIYIDIVSKKPLFSSTDKFDAGCGWPSFSKPITTDAIAYAQDDSHGMQRV EVSSRVGGSHLGHVFDDGPREKGGMRYCINGASLKFIPLEEMDALGYGDYKIYVE >gi|257441067|gb|ACYG01000032.1| GENE 3 3630 - 5168 1818 512 aa, chain - ## HITS:1 COG:Cj0953c KEGG:ns NR:ns ## COG: Cj0953c COG0138 # Protein_GI_number: 15792282 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Campylobacter jejuni # 1 512 1 510 510 716 71.0 0 MRALISVSDKKGVVEFAKGLQRLGFEILSTGGTHKLLLQNGVKAAEVSQYTDSPEMFEGR VKTLHPKIHGGILYKRNDANHVSQAAQHDIGGIDLVCVNLYPFKATVAHTDDFSEIIENI DIGGPAMVRSAAKNFASVYVVTSPLDYDAVLQNLASSDESEKLKFRQNLMIKAYEHTAAY DAMIANYMNERFNGGFGAKKFITGSKVFDTRYGENPHQKGALYEFEDFFSNHFKSLKGEA SFNNMTDMHGALMLASSFGKAPAVAICKHANPCGFAVKSSLLESYVEALKCDPVSAYGGV VAINGVLDEELAHKINEIFVEVILAARVKPAALAVFEKKKRIKIFEQGGEFLIRENDKYD FKFIDGGFVYQQRDYVGADEVANARCVTGRAASESELNDLKIAWQIAALTKSNCVVYVKA RAMVAIGMGMTSRVDAARAAVAKARDVGVDLRGCALASEAFFPFKDSIEIAHAAGVAAVV QPGGSIRDDEVIASADEFGMAMYFTGVRHFLH >gi|257441067|gb|ACYG01000032.1| GENE 4 5165 - 5629 270 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461354|ref|ZP_05626450.1| ## NR: gi|257461354|ref|ZP_05626450.1| hypothetical protein CAMGR0001_1921 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1921 [Campylobacter gracilis RM3268] # 1 154 1 154 154 223 100.0 3e-57 MTEFFGFIAEAFKFIISVFENISGFILSLGLKAYFLKFNSFLYENLQFLGDADLIKFVLF SIYFIIVSTLISYFMSGNFMFIFKNLSLYIFFMVCYFIFHCITSGGGLWTYILSAIAFIF VGSRVISNIHDNLLKREVKIVAKRILENQSKEKR >gi|257441067|gb|ACYG01000032.1| GENE 5 5626 - 6408 531 260 aa, chain - ## HITS:1 COG:no KEGG:SO_1732 NR:ns ## KEGG: SO_1732 # Name: not_defined # Def: cold shock domain-contain protein # Organism: S.oneidensis # Pathway: not_defined # 5 236 1 221 224 63 26.0 9e-09 MGEVISGSVKKFFLDKGFGFITDDDGVEYFFHKNDILNAKIASGDFVLFKPSVGPKGSIA KQISLVSFEIPSKIFFENEIPREYKILERSSYRFSIFGVDGRIIGCKNSTKNRLKIYAEA FGANALLNIQYNKGQEERTNDTIIYDEDGDINCIIPNTYYVNTHLFSANLARVGKKVSSE AKKDPNLLHKIPLDTLIEESKKYLDEKSGYALIRSAALFAIIVLLFNSLLVAPSALIFII SLVIAFFVTRFIFPNFKALA >gi|257441067|gb|ACYG01000032.1| GENE 6 6425 - 7015 721 196 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461356|ref|ZP_05626452.1| ## NR: gi|257461356|ref|ZP_05626452.1| hypothetical protein CAMGR0001_1923 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1923 [Campylobacter gracilis RM3268] # 1 196 33 228 228 354 100.0 2e-96 MKFFISSLFLALSLLGCAGKNSLATDKTYVLSSELGDTKYALCGGNLYENGAILGPYETR GDARLAILGGSGANLDKNAKLIKLYFFERRYGVIYTASHKNGVCAEYNKGNFVDFQILFN IFQSKEWFNYSGGISPGGERLKELSSARMAKFNGAKLGAADEKARREYQKARREAILYFQ LNANDMRELIFKKLCE >gi|257441067|gb|ACYG01000032.1| GENE 7 7507 - 8538 1276 343 aa, chain - ## HITS:1 COG:mlr4682 KEGG:ns NR:ns ## COG: mlr4682 COG0616 # Protein_GI_number: 13473926 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Mesorhizobium loti # 64 294 84 330 380 64 26.0 3e-10 MGFLSKDEEPQKQGAKKAAKQPPILMKQTQEVITNIEKYLGAPLLTYFNSGAGSVCGNDA ISINDHLKGKHFEKLYLYIKSDGGSGIASLKIVSILRNHCDELIALVPANCASAATMMAL GANKILMGPLGYLTSVDTSLRHELSPVTNTNDQANVSMDELSRVVKLWKNNERPNDENPY KELYKYIHPLVFGAVDRASSLSLKICREILRYHFEDEQKIAFISDKLNSGYPSHDYPILF REANELGLQVEKMDTRLSEMLQILNELYAEMGQRTFTDFDENNYHDNNIANIIEILGCQI YYQIDKDWFYREEEKRWIVLNDESSWRKNEIDGKNIKNSIYYI >gi|257441067|gb|ACYG01000032.1| GENE 8 8565 - 9188 516 207 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461358|ref|ZP_05626454.1| ## NR: gi|257461358|ref|ZP_05626454.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 207 1 207 207 355 100.0 1e-96 MDKIKILALLAAVALLAGCMKVKYSQAELHPENSVMMSYDGQTVTEYKISGGALLKDDAI LGRYEEEGSNLYLFTDERGVGTAKDQISQRALNKFTIYVFTPNKELRIAEYSASGGVCKT FAEGKFVSLKEHFSGYASSAPLYSYSFSASVSQSASANVISRYEYVSSSLKNSRAFLQSP HTALGNTVKESIEWHRDRLRDICKLKF >gi|257441067|gb|ACYG01000032.1| GENE 9 9203 - 9820 435 205 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461359|ref|ZP_05626455.1| ## NR: gi|257461359|ref|ZP_05626455.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 205 1 205 205 387 100.0 1e-106 MKNFIIFAVLAALLGGCGVLRPAKSDKEFKFYDGNKTVIYKFAGENLYENGRNLGVYSIY RNNIRTIAVDGAGRSYGNNYRSALNAKRMKFYHFDDGGAMIFSVWHKDGICSVYNAGRYV NFDFISNTFKDGDWLYADGKISKSDDEGIIQNGASKELGVYKTSDISKLIQDKKMDRAVK ISVTSVYLHGYAKAMKTRKLDDFCR >gi|257441067|gb|ACYG01000032.1| GENE 10 9837 - 10478 396 213 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461360|ref|ZP_05626456.1| ## NR: gi|257461360|ref|ZP_05626456.1| putative lipoprotein [Campylobacter gracilis RM3268] putative lipoprotein [Campylobacter gracilis RM3268] # 1 213 1 213 213 408 100.0 1e-112 MKNFIVFAVLAALLGGCAGKKDQNGIADSEDIAMLSFDKNISTKYRAHNGKLYKNGKVLG KYLTAPGLGMHIYTDEMGNGYIDPSAIKEHNSKKITEIIFVPNEFIKVISYSHNDGVCKA LSAGKYVHIKEYITMYSRGEPIVAYSYDVLMSRKGMGKISSRYDFANEKLSYVDKKILEK LNSTVADHVQASVVLSGATLLGLLCREKSKRLD >gi|257441067|gb|ACYG01000032.1| GENE 11 10587 - 11474 937 295 aa, chain - ## HITS:1 COG:SA1408 KEGG:ns NR:ns ## COG: SA1408 COG0484 # Protein_GI_number: 15927159 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Staphylococcus aureus N315 # 226 290 2 58 379 65 55.0 8e-11 MQLAEAKILVALLAKVAKSDGHVSESEAAMISEILDDLVRQMGAGEREREALKLVYKLEK ENFANVRELAEKYNQIYRPSPSRKTGLIYFFLNLAYVDRGFSAAERRTISQICDGLGIAE HIQSQIFATFERSFYGTYYENGGAQSSSAYDEYDGYSTRSGGYWDKYGGRSTGGYGSSSY GGGTGYGYGGTAGSGYGGSQSSSGYGGYSSGYSDGYSGSSQGSAKSKRDPYEILGLSKDA TFSEIKKKYRELVKKYHPDILMGKGADEEIIQEGTKKLQEINEAYKILKERFGEK >gi|257441067|gb|ACYG01000032.1| GENE 12 11571 - 13766 2711 731 aa, chain - ## HITS:1 COG:Cj0955c KEGG:ns NR:ns ## COG: Cj0955c COG0046 # Protein_GI_number: 15792284 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Campylobacter jejuni # 1 728 1 728 728 976 65.0 0 MDKKVVAAHKISDEEYEKILKILGREPNLLELGIFSAMWSEHCSYKSSKKYLSGFPTKAP WVIQGPGENAGVIDIGGGMAAVFKMESHNHPSFIEPFQGAATGVGGILRDIFTMGARVEA NMNSLRFGEVRGRSESARKQRYLLKGAVAGIAHYGNCMGIPTIGGETSFDKSFDGNILVN AFALGIVKKDEIFYGRAEGVGNSVIYVGSKTGRDGLGGAVMASDSFNDANKSLRPTVQVG DPFAEKLLMEACLELFKTDYVVGIQDMGAAGLTSSSFEMAGRSGSGMRLNLDLVPMREAG MSPYELMLSESQERMLICAKKGCEEKIKEIFAKWDLDAAVIGEVTDSGKMELFWHGELAG VIPIEPLSEAAPVLDRPIKEPAYMAQIARQNLCGCGASERELEAAFDKIFEDPEVLNKSY IYDQYDANVGLNSAKRPGMLGAAVMRVKQNGVKLAMAADCNTRMNYVHPRIGAALAVASA GRKVAMSGATPLAITDCLNYGNPQNPEVMWQFAQGCEGIKQACATLNTPVISGNVSLYNE TGGVSIQPTPAIVCVGTNEGEIIPSDFCASGVSVYLVGDTKGVFAGSLYMKAVENRVAGS LPELNLKAERALWDFAIEAGKSGVLEFANSVGIGGVAITLAKMACVGGIGGEFEMSCDDS RDIFDESFSRAIFGVRNEAKFKELAAKYGLSLMRLGVSGGEAFRINSVRKNLKALKEIYF GEFAKIVKSED >gi|257441067|gb|ACYG01000032.1| GENE 13 13831 - 14586 893 251 aa, chain - ## HITS:1 COG:FN0542 KEGG:ns NR:ns ## COG: FN0542 COG0463 # Protein_GI_number: 19703877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 5 245 8 249 263 162 39.0 8e-40 MIKASVYAIVMNEERHIERMLRSVSDFAEIIIVDSGSTDATLQIARKFTDKIYHHDWQGE GVQKNYAFSLCSNEWVLNLDGDEEVSPELKGEIEEFMSQSDYSALDIKFHEYSLGRKCSD LVHKNTHIRFFRKECGEYRNMGVHAQISIVKGAVKKSKFCVNHFSEKPIAELVTKNNNYS TLRAQGDFEKGKKPSLAKLLLIYPFAFFKSYILRRSLFDGRKGFITANINAFYAFLKEAK LYEKYLKKGED >gi|257441067|gb|ACYG01000032.1| GENE 14 14583 - 15374 804 263 aa, chain - ## HITS:1 COG:FN1244 KEGG:ns NR:ns ## COG: FN1244 COG0726 # Protein_GI_number: 19704579 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Fusobacterium nucleatum # 34 244 15 228 250 118 35.0 1e-26 MNYIFMFLIFAAAVGVSLRYNWWRIPQGWHKARVLMYHSVEEHKGDKFDKWRLKPADFER QIAWLAKNGFESFKLSELIALERLPKKAVCITFDDGFENNFTDAFEILKKYDFKASIFLV PDAVQNDWERANTTHLARMLNEEQILKMQASGLVEFGAHTMHHVNLDLTYASDPQLATDE IIESKARVARICGRPCEVFAYPYGKFNDEILNIARSNFKGAVVVKRGLYEAGDDKYAVKR IGILGTEGFFDFWLKFTRIRNKL >gi|257441067|gb|ACYG01000032.1| GENE 15 15371 - 16615 655 414 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461365|ref|ZP_05626461.1| ## NR: gi|257461365|ref|ZP_05626461.1| O-antigen polymerase family protein [Campylobacter gracilis RM3268] O-antigen polymerase family protein [Campylobacter gracilis RM3268] # 1 414 1 414 414 721 100.0 0 MLSKFSYEKIMGYLLYILSLSFFVGKSYNVFSALIVVIFLFHTFKERLFCVFKDKFFIFM SIWCIYMLSSVIWATHKDGIISAAGVLFLWVLLYLAIKTYLDSKDKLERFFKFQTYIVLF VAFNALLQFLIGYNIFGVPILDGRATDIFFSSNSRIFPFILPLYVGVFGAMLSLKDRSSS HYILYGSALFGILIAVPLSGSRGPLLLLSVFIPIIVWTSPYRKTAFIMLAVLCVCVISIA FNSDKLQDRLISLAHPFENQKHLRVAIWKTAIEEFKDNPILGVGFKNFKYRQFDYYKPEF ESYEIDKEQNKMVEHAHSPWMDILAEQGIVGFGFAITLFFSILYNVYRKGTFILIGAFSV FYAFSFLNSTFVISKSRWSFFMIFSITIFMLVANYYKYINSSSDRKVDDVKESR >gi|257441067|gb|ACYG01000032.1| GENE 16 16931 - 17164 301 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461366|ref|ZP_05626462.1| ## NR: gi|257461366|ref|ZP_05626462.1| hypothetical protein CAMGR0001_1933 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1933 [Campylobacter gracilis RM3268] # 1 77 1 77 77 123 100.0 5e-27 MSKLDEAKERLMTLRFWLGIIVGLMISLGGWLLNNYETAKAFILILSGLGMIALCFALVL VNRKIEKKYKEIRELKK >gi|257441067|gb|ACYG01000032.1| GENE 17 17283 - 18515 994 410 aa, chain - ## HITS:1 COG:CC3173 KEGG:ns NR:ns ## COG: CC3173 COG0438 # Protein_GI_number: 16127403 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Caulobacter vibrioides # 243 352 173 285 349 76 40.0 1e-13 MKIAYLCCSRFYGGVEKIVIDSLNELCKSEQAALIVPDRCEFLQRLDARVQIYEYKSRDK RYNPFLFAEIYRFLRSGGFEILHSHGAKAAQIGFVVEKFLSLKLVATKHNDRKAPVFDRV RNVIAASRKVATTINHAAKVIYFGIEPRQEFANREIYARCKDLEGAANEALKETKDARSD SAGAAGASQNMADAAYTSQDMPGRAGVSQDRALDADASQNKTSSVFVSQQGANAAAGNFK FSIVAVGRLDKIKGFDLLIRAASELKFDFELKIYGQGGERQNLQNLIDSLNLRDHVRLCG FCDDVAAALAASHLHVISSRKEGFPVILIEGIFYSPVLISTRAGGISEILSEEFLCEAAD LGAKIDEIYRTYGKYARAFAQKHAKFKQTLTLQNYISSLKNYYEELLCEA >gi|257441067|gb|ACYG01000032.1| GENE 18 18512 - 19333 927 273 aa, chain - ## HITS:1 COG:BS_yxkH KEGG:ns NR:ns ## COG: BS_yxkH COG0726 # Protein_GI_number: 16080931 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 24 255 55 263 279 127 33.0 2e-29 MIYAAAVLAFAAAALFAWFCLRFAWWAKDLPYEYPRVLMYHMIREHLPKRASKFNRLRVT PTAFEKQLAWLKRNGFTSYTLSELASLDKKPAKAVCITFDDGYRDNLTGALPLLQKYGFK ATIFIVNRRFEGNWATDKDLKKSSDELNREQMLSDQEVCELLQSGLIEIGSHTLDHANLP SLDAAEQLRQMSESKREIEAKFDISCSAFAYPFGFYDEISVRCAREAGFSCAVTTQNDVL RPHYSNFEIPRIMVSGRQGLFSFILKMKKGRNR >gi|257441067|gb|ACYG01000032.1| GENE 19 19330 - 19512 142 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461369|ref|ZP_05626465.1| ## NR: gi|257461369|ref|ZP_05626465.1| hypothetical protein CAMGR0001_1936 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1936 [Campylobacter gracilis RM3268] # 1 60 1 60 60 97 100.0 3e-19 MKNFFYENGAPNGWRITFLTLLLLWCASLFFKNAVYQISFAALSLATILSFLAYRMKIER >gi|257441067|gb|ACYG01000032.1| GENE 20 19509 - 20585 1040 358 aa, chain - ## HITS:1 COG:XF0102 KEGG:ns NR:ns ## COG: XF0102 COG0438 # Protein_GI_number: 15836707 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Xylella fastidiosa 9a5c # 1 357 9 374 376 189 32.0 7e-48 MRVVQILPELNEGGVERGVVELNREFARCGIENFVISNGGKLASKIEKDGGVHVQLDVCS KNILSVAARVLKLRKILSGIAPDIVHVRSRVPAWLVKFARPRAKIVSTVHGINSVNFYSK IMTDADAIICPSGYTRDHVVRSYGVDAAKITIIPRGIDLEKFNPKNLDERFIAEFREKFH LAQDDFIVSSIGRITQIKDYKTLIRAAALASEQKLKILIVGGVRADRDEYFSELKSLVAE LSLCERVIFTGSQSKVAEIYSLSSVTVSASSKPESFGRSMAEAIALNCPVIATRHGGALD IIKEGENGYFFDVGDAQALAELFAPARELKFDGYGYVSQNFSLEQMVEKTIKVYESLI >gi|257441067|gb|ACYG01000032.1| GENE 21 20582 - 22021 874 479 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0656 NR:ns ## KEGG: CHAB381_0656 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 130 479 2 298 298 318 48.0 3e-85 MEDGLMARQISRGESKQGVIRNLSAPQGSRFFVKEQSVVNLGGAAREGKILNRESSMTIA AARDGKNSDLKNFISVCGSPSYILRRENFRGKNLRSSAPSWAWHAGSGSLNLNSESSCVN PPAAKNPYRKALILSDGRKGHENQSIAFCELRGLEFCICKIAYANKLLKLFSYALDFLGL YFKIFKCDLGESGAAADCKNGSNLNNSALNSPVAPDSANLDAAPNGTNSDAVSYSANLDA ASDRNLNFADFDLFVGAGSTTYYALKFYARRYAKPSIALMYPKGYRKDFSVIIAGAHDRP KPRANLKISPVSLSFSRPQGLYQPQRKAVGFIIGGPNSCFEMGDEILKQIEGVRAQFADC EFALTTSPRTPRATENALEKLSWDYSVIYSREPVNPIGDFLAQCEWVFISEDSVSMISEA ASNGSASVAILSLKRKDAHNKFDDFISALVSTGHARRYDEALKKTAKYDLKAFVREIKI >gi|257441067|gb|ACYG01000032.1| GENE 22 22006 - 22887 828 293 aa, chain - ## HITS:1 COG:mlr1179 KEGG:ns NR:ns ## COG: mlr1179 COG1560 # Protein_GI_number: 13471259 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Mesorhizobium loti # 10 292 29 310 328 120 31.0 2e-27 MKEKIQYFLALGLIKFAKFAPKSFIFAFFDKLALFASWKLSRRVKVAQDNLRAAYPQKSE SELHALAIENFRSIARTLTDTLLFYNGRLKFDDLISNGEQALGRVRELKGDNPHGILFFT AHFGNWEILANFFGANGFPVSVVGRRSDNELIEERLVAPFRERYGNDLIYKDDAMRRLVQ ALKQGRNVGILPDQKPGPKNSLITTFFGRQCYTTKTIASLYLKFRPVLIPIFARRGEDNR YEIVIKDFPPLSEGLNKDEAELFITQKCNDIFEEVVRTAPQQWFWIHKRWKMD >gi|257441067|gb|ACYG01000032.1| GENE 23 22947 - 24695 1040 582 aa, chain - ## HITS:1 COG:Cj0956c KEGG:ns NR:ns ## COG: Cj0956c COG0486 # Protein_GI_number: 15792285 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Campylobacter jejuni # 1 339 1 338 442 370 59.0 1e-102 MSETIAAIATAHGIGGICIVRISGEEALSIALSLSHRSSLRPRYATLVNLFDASGEAFGE AILIYFKAPHSFTGEDVVEVQTHGGFTASSLALDAVLALGARIANPGEFSKRAFLNGKMD LSKAEAISDLINSRSQSAAKILARNLRGELADFVANLRAALVKTLAFVEVCIDYAEDDLP SDVLQNSQEMLSQNIASLEKITRISRSRRGLIEGFKVAIVGKPNVGKSSILNSMLSFSRA IVSDEAGTTRDLIEESLQIGTHLIRIVDTAGIRHSGSKLESIGISYSLRAASEADVILAV FDASREWDAEDAQILKILREQKGKKIIYVLNKCDLLRKFHPSAEDLGDDLEAFSAKNFAV KNPISENFAAENLKQSQTCDASLNSCAQNLKAKNLKHDLSAQNFTSINSAPTSQTALANS INLVGQNSAAKAGLASLNTERATVSCAAENFTQDDFKQNSSNSIAPSSSAINSAGQNTQA NSIFTPLEISANEGVDQILTALESYLNSQNFDGLMLSNERQILSCESALAALKNASERLA CGELELFAFEINRAIEAIARISRPFERDEILDEMFSNFCLGK >gi|257441067|gb|ACYG01000032.1| GENE 24 24698 - 25453 824 251 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0653 NR:ns ## KEGG: CHAB381_0653 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 251 1 240 243 182 42.0 2e-44 MIIEAENLKDAYNKAAAELGCSVTQLNVRVLQHPSGGFLGFFKKNAVIEAVLEGEKFSEN PEFSAPQNKAGKAEKKQGDKSESQSPRATHSKHRKEKQKGVVTDEILSDIKEKLSALFRS SEFNIEVSDVSKIDENTVYIKLQGEDSALLIGKEGHRYKALSYMIYNWISIRYDLAVVFE IAEFLQNQERFIDSYVNALVERSGNERIVTKAFDGAFIKIVADKLKQAYPDRFVGIKSTR SGKIVIVDEKS >gi|257441067|gb|ACYG01000032.1| GENE 25 25450 - 26985 1502 511 aa, chain - ## HITS:1 COG:Cj0958c KEGG:ns NR:ns ## COG: Cj0958c COG0706 # Protein_GI_number: 15792287 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Campylobacter jejuni # 1 507 39 528 528 530 54.0 1e-150 MEANATAAQIAQKNTAKSAPQTSAAGVSAQGANLNTANSISAPLVRVVGKEANFTIDGLG RISSYALNDAKFRNENGDAINLIDPKSHSKPLEMRFEDAALNAMAFDTPYSASSNELDVR NGEASVTLSQSLGAVSINKILTFYPNGSYKLDLKLGGNARYFISPGSRPNVEVDSYTVHG VIVGKPGEAGISDKIASFFTGSQAISESVEIFKDGDVDKNERISGANIAASSDRYYTTLF YGESLNATVTDADKISQVFIGSDGDLSLTGYIGAKDHATLSSINPALTHIIEYGWFTFIA RPMFKFLNWLHGYIGNWGWSIVVLTLIIRLILFPLSYKGMLSMNKLKDLAPKMKELQEKY KDDKQKLQMHMMDLYKKNGANPMGGCLPILLQIPVFFAIYRVLLNAIELKGAEWALWIHD LSLKDPYYILPITMGILMFLQQKITPTTFTDPMQEKMMKFLPLIFTVFFVMFPAGLTLYW TVNNFCSIIQQYVINKAFARHKQAQIAEKKS >gi|257441067|gb|ACYG01000032.1| GENE 26 27093 - 27431 96 112 aa, chain - ## HITS:1 COG:Cj0959c KEGG:ns NR:ns ## COG: Cj0959c COG0759 # Protein_GI_number: 15792288 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Campylobacter jejuni # 11 109 9 106 113 74 45.0 4e-14 MKRFFIAAIGFYRKFISPLLPRCCRYYPSCSEYALYEFKFNSVFGAFCAVTARILRCNPL FSGGIDYPIIARNFKFCVFSKIRSSNASADKFKLWFIPYKKNRYYVIRLGEK >gi|257441067|gb|ACYG01000032.1| GENE 27 27751 - 27885 209 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157163975|ref|YP_001466644.1| 50S ribosomal protein L34 [Campylobacter concisus 13826] # 1 44 1 44 44 85 86 2e-15 MKRTYQPHNTPKKRTHGFRVRMKTKNGRRVLSARRAKGRRRLAA >gi|257441067|gb|ACYG01000032.1| GENE 28 27961 - 28314 301 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461379|ref|ZP_05626475.1| ## NR: gi|257461379|ref|ZP_05626475.1| hypothetical protein CAMGR0001_1946 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1946 [Campylobacter gracilis RM3268] # 1 117 1 117 117 187 100.0 2e-46 MKKALIFWLLCGAIFADCTALRAQDGAVSLSASAYVANDKQSEFEKNHSEILLNRQKNEL DRQSLQNNLQRESKGAGDHDDFSMKKQPMQDIKERNNRNEQDLKLRRKKLQGDAYRR >gi|257441067|gb|ACYG01000032.1| GENE 29 28316 - 29674 398 452 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 1 450 1 457 460 157 26 2e-37 MINSKVILSGVLAVFIGGCASNQSEVEFKPVEHFKDENASYEIDTLWYKKYGESYLNKLV DQALANNYDLKTAALNVESAYANLGLSRADLFPTLSSSWSAGANRDISTGSNWNKTYSSG FNVSYELDLFGKIRSAVNAEGWNAKASEFDLENTRLTLINSVVSGYFEMLYLNDSLKWTK QNLSDYREIEKIIKAKYDYGKSEQLDYRQIQNSILGLENKVLSIQKNIEDNHKYMRNLIS SSLQFDDNTDSINSIEFQGVDLNVPYTALANRPDIRAAIARLNSSFYDEQTAKLNFFPSV NLGAGLTNGQGVSANDSFKLNFLSGNVSISLPFLDYARVENRLKISEIAFRKNVVNYEQT LSNATNEVLNLYRIYQINLASLKNLSAAYDEKARIADLYAAKYEAGSSELKDMLEARTDA VNAKINELNQRYLTLQNEAAIYRAMAGKFKRK >gi|257441067|gb|ACYG01000032.1| GENE 30 29688 - 31616 397 642 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 251 642 7 413 413 157 27 3e-37 MLELKDINKKFILGDNEIHVLKDVSLNIEAGEFISIIGQSGSGKSTLMNIIGCIDTPSSG SYKIEGRETANLIGDELAALRSKKFGFVFQKYNLIATMDAIANVSLPAVYAGVGASERTK RAVELLNKLELGDRTKNLPSKLSGGQQQRVSIARALINGGEVILADEPTGALDSKSGETV MQILTALHKEGHTIIIVTHDAHIAEFADRIIEIKDGKILSDKRKAERVFERKKEQIKTKN SFIFCKDQLIESFKMSISAIFSHKLRSILTMLGIIIGIASVICVVALGNGSQERIISQIR AIGTNTINIYPGKNFGDVRAGFVSTLTISDSKVLARQPYVDYATPNSYASGTITYANLSS KAQLRGGGVNSLAVNGIDIEEGRNFSDDDIKNSASVVIIDPNTKKTFFKNTDPIGKTILF LGRPLKIIGVSGKDKNAFGSSENLRIYAPYSTVMNKISGDRKIGSITIKIKDDVDTHVAE ESLTQLLIQRHGSRDFHTMNADTIKQTIESTVGTMTILISSIAVISLVVGGIGVMNIMLV SVTERTREIGIRMAIGAKQSNILQQFLIEAILLCSLGGALGILIALALGFAFNTISPDFA MKFTTAPFVIAFAASSAIGIVFGYLPARNASRLNPIDALAQE >gi|257441067|gb|ACYG01000032.1| GENE 31 31638 - 32819 1325 393 aa, chain - ## HITS:1 COG:Cj0606 KEGG:ns NR:ns ## COG: Cj0606 COG0845 # Protein_GI_number: 15791966 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Campylobacter jejuni # 22 386 20 388 390 270 46.0 5e-72 MKKTLKFIVSIVLIFIAIYFLYGKFFKQEEAPKALTTRLEKGDIRGTVTAAGEVYARDLV DVGAQVSGQIKKLYVKVGDKVQKGDMIAQIDSVTQENEIAQQKAQLLIHEANLASAKIAA ANAKTQYNRELELYKRNAASKEAVENAKNSAALKEAEQKQIEAQIEQTKLQLSTAETNFG YTKITAPISGTIVSMPVEEGKTVNSNQTTPTIVKIADLSKMEIKMQIAEGDISKVKVGMD VEYSILSDLDNIKKAKIYKIDPGLTTLSDGTYDKTSSGSSSSSSSDSAIYFYAKMLVDNE NDFLKIGMTTENNIIVSEANNTSYLPTSVIKRDAKGDYVTVLNGKEPEQRYVKTGVSDDL NTEILSGLDEKDEVLIADGKAAPLNMDGPPMVF >gi|257441067|gb|ACYG01000032.1| GENE 32 32884 - 33753 876 289 aa, chain - ## HITS:1 COG:VC0075 KEGG:ns NR:ns ## COG: VC0075 COG0697 # Protein_GI_number: 15640107 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Vibrio cholerae # 1 280 1 282 295 254 51.0 2e-67 MKKLILVTCIWAFSFSLIGEFLRGIDSAYLAFSRVSLALICFLPFMKFRGINPALALKIC AVGAVQIGVMYIFYYRSFAYLKVYEVALFTIFTPFYVTLLYDALKLRFRALYLFSVAVAV LGALVIKFGAINSEFLTGFLLVQGANLCFGLGQSAYKFMLERHGFSEQKELFGYFFVGAA AVTAIAAIVLGDFSKFNPSFSQGAVIMYLGTVASALGYFLWNKGACEVDSGVLAIMNNAL IPAAIVVNLVFWQKDADLARLLAGSALIYVSLILHKKIMKFYAVREQRI >gi|257441067|gb|ACYG01000032.1| GENE 33 33905 - 35206 1584 433 aa, chain + ## HITS:1 COG:Cj0821 KEGG:ns NR:ns ## COG: Cj0821 COG1207 # Protein_GI_number: 15792159 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Campylobacter jejuni # 5 427 4 427 429 479 58.0 1e-135 MNDVSVIVLAAGLGTRMKSQKAKVLFELCGEPMIIHILKKAYEISNDVSVILHYQFDEVK SAVLAHFPNAKIYKQDHEHFPGTAGGLKEVEIRGGKTLIICGDMPLVKSAELRKLCEGDA EVNLSVFSARDPFGYGRVITRGGEILKIVEQKDASEEEKAVKDANAGCYCFKSEALKQIL PQIKPDNAQKEYYLTDAIKIAKDMGLKCAAVWVDEQSFMGINDKFALSIAENLMQNEIKE NLMKQGVLMRLPQSIYIDSRAKFIGECELQENVSIVGPCVIESSLIKSGCVIEDSVVKNS DIGPMAHLRPKCEVIGTHIGNFVELKNAKVNKIKAGHLSYLGDCEIDEGSNIGCGTITCN YDGKKKYKTIIGKNVFIGSDTQLVAPVQVADDVIIAAGTTVTSDVPSGALAISRSKQINK DGFFHKFFRSEDE >gi|257441067|gb|ACYG01000032.1| GENE 34 35199 - 36380 1561 393 aa, chain + ## HITS:1 COG:Cj0822 KEGG:ns NR:ns ## COG: Cj0822 COG0452 # Protein_GI_number: 15792160 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Campylobacter jejuni # 4 393 2 384 384 308 46.0 2e-83 MSKKKVLLAVCGSISFYKAFEILSALKKSNFDVYVALSDGVQEFVSYKAFEALCDHPVLC KANENWQAGINHIAYSKVDLVLIAPATANTINKLAWGVCDNVFLEVLNAAFAHAKVVIAP AANPALLENNITKNCIDMLKASVNAYFVDPIEKTLACGDTGKGGLASTEAIMQTLKRALY NDKFWEDKTVIITGGATIEKIDSVRGITNFSSGKTSKAIADALFYLGADVTLISSNEYEN LPYKLVKFESTIGLKSALDSTKFPDGAYLIMAAAVSDYSPKVRYKDKVKKAEIGEIWNLR LGENEDLLSSVRGNIKKVGFKLETDRENAVGEAKRMLNEKHLDAVCLNVLDDIIKLGGDV LKVTFITKEAQVVIDTAPKDEVALKIAAQLKKI >gi|257441067|gb|ACYG01000032.1| GENE 35 36414 - 37061 707 215 aa, chain + ## HITS:1 COG:HP1221 KEGG:ns NR:ns ## COG: HP1221 COG0020 # Protein_GI_number: 15645835 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Helicobacter pylori 26695 # 1 215 12 232 234 219 51.0 3e-57 MDGNGRWAKKRGLLRTGGHEAGAEVVEQICEFCIDEGIANLTLYAFSTENWKRPKSEVEF LMKLLQKFLISRREKFIQNGIKFHPIGDISAFSGDLRSEIEYLSNLTQNGRALNFNLAIN YGSRDEIVRACERLLASGERLSEAGIGAHLDTAHSGDVDLLVRTGGEQRLSNFLLWQASY AELAFTPTLWPDFTREELARIVSDFRRKQRRFGGL >gi|257441067|gb|ACYG01000032.1| GENE 36 37291 - 37716 246 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461388|ref|ZP_05626484.1| ## NR: gi|257461388|ref|ZP_05626484.1| hypothetical protein CAMGR0001_1955 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1955 [Campylobacter gracilis RM3268] # 1 141 1 141 141 252 100.0 6e-66 MSYYIQCDCGKKLTKKPMKTLKCPRCGSVYKKSNKFIYTVNACLFLLITLVFIIVPKDTE ILTSLASAIFMYVVAWLFLDTLNVDILDVAILACGFLIFNYLSQILNEPLIAGLIAILFC VGAAAIFVKFFPYERQKINEN >gi|257441067|gb|ACYG01000032.1| GENE 37 37782 - 38537 952 251 aa, chain + ## HITS:1 COG:alr1315 KEGG:ns NR:ns ## COG: alr1315 COG1989 # Protein_GI_number: 17228810 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Nostoc sp. PCC 7120 # 9 243 11 261 269 126 36.0 4e-29 MDLNIVYGVIFAVFGTCVGSFCNVLIYRLPRGQSVNFPASHCPKCSHALKFYHNIPLLSW LFLGGKCAFCKTKISIRYPIVELLGGALALAAYFGEPDLAKAAVLGLCFILLMALSAIDF EYKAVPESLLYVVTALSLAYTLMYDFDLSGVGAAAGYAAIFFVLRFIVTFVLKREAMGSA DIFIAGVMGAILGWKLGGISIYIGAILTLPAYLIAHRKGYELPFVPFLSMGLLLTFIFRD QILRLLDVIYG >gi|257441067|gb|ACYG01000032.1| GENE 38 38530 - 39561 1110 343 aa, chain + ## HITS:1 COG:Cj0826 KEGG:ns NR:ns ## COG: Cj0826 COG0795 # Protein_GI_number: 15792164 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 6 343 6 341 341 254 43.0 2e-67 MDRVQRYLFSNFVGSFASLFSTLFIIMSIVFFLQIARITSFIEINFSELVKLYLFMLPRI LIFTVPIAFFVALSISLFRLSKENETIVIFTIGYATRKIVLFFGISAALCSLALLFVSLF MMPIAENLKDNFIDYKKISATLNIKSNEFGQKFSDWLVFIDSQENNGTSTLYKDLVLYNP GGSQDHERMIVARSGEFKNENASFSAMLHDGKIYTMGGDQWHVSEFESLTLRTQSDRNIR GGGGVIGYWSEMGGSEKRRKEFSIYTLVSLFPLASFLFALSLGIVTYRYEKGFVYAGIFG VLFSYFALIMLLSKHPSIALPVTFGVTLIASLLYYRIKIAPRY >gi|257441067|gb|ACYG01000032.1| GENE 39 39545 - 40414 288 289 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPRGTEKSSELCGGKILNKSSSARNLADKISASKASASEILSGINLEHEAQNGEQVFVSK DELSNFKNSALASSASDTATYTALDCGLNHESAKQSSSAVRTKKTARGADLNSTCKNYTD AAASDICAANAARANVASGDALKIYMSPVAKFYTTCPASARTENSRKANAAHKADAPANT PANASELKNIIKSASTNDFAASELAHISKISATPNTPADACAYATSANSERVKLKLIYSY DGSKFSGSQSQPHGRGVEDVCARLWGEWGSLRRSSAARAPIKGYMRCAR >gi|257441067|gb|ACYG01000032.1| GENE 40 40324 - 40935 365 203 aa, chain + ## HITS:1 COG:Cj0827 KEGG:ns NR:ns ## COG: Cj0827 COG0101 # Protein_GI_number: 15792165 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Campylobacter jejuni # 4 203 34 241 241 171 40.0 7e-43 MRTALGRVGIFAPLISSSRTDKGVHALRQVSCVECTVHWELPRLKELINRHCAPYIFVQH ISPVPRDFHPRYDAVARSYRYVLNHERPSPFLSDFCVFYPRVDLAALNAALANFIGEHDF REFMKSGSDIKSPVRKLYVARAYSFRNLTLINFKANGFLRAQVRLMVANALKSVQSGRKI SFSRALSRIPFPPNGLYLSSVSY >gi|257441067|gb|ACYG01000032.1| GENE 41 41169 - 42110 1259 313 aa, chain + ## HITS:1 COG:SMb20292 KEGG:ns NR:ns ## COG: SMb20292 COG2358 # Protein_GI_number: 16264030 # Func_class: R General function prediction only # Function: TRAP-type uncharacterized transport system, periplasmic component # Organism: Sinorhizobium meliloti # 9 313 18 327 327 256 44.0 3e-68 MKKFSVALAGLALLASVSGAKEFINIGTGGMTGTYYPVGGAICRLVNMDKNMKCSVQSTG GSTYNVNNVLKKELNFGFVQSDVVYDKYNGTGKFQGAADKNLRSVISIYPELLAFVVSKE SGIKAYGDAAGKKINIGNPGSGNELTSTIVFENYDFDLKKLAQHGVLTAQECPMALKDKK IDGYFYVVGHPTANITDAATSLPIDLVGIDDEHIKKILEKYPYFAKGVIPAKMYDGVDHD TQTIGVKAVLVTDASQSDEAVRAVVKAILDNFDEYKKLHPALNLVSKESLLEGLSAPLHP AAEAVYKEAGLLK >gi|257441067|gb|ACYG01000032.1| GENE 42 42119 - 44200 2051 693 aa, chain + ## HITS:1 COG:VC0429 KEGG:ns NR:ns ## COG: VC0429 COG4666 # Protein_GI_number: 15640456 # Func_class: R General function prediction only # Function: TRAP-type uncharacterized transport system, fused permease components # Organism: Vibrio cholerae # 23 642 31 716 854 405 39.0 1e-112 MEKSTQNDEQVLEVKSREFTSKKLFWLVTLVCFAWSVFQLYIAYFTLNTNIARSIHLAFA IFIIFSLFPFRPRSKAHFYIPFYDYILLIVGVAAILYPAIEFNGLAQRPGNYLSRDIVAA FIGIFILFEAGRRMMGPALGIIAFTFLLYCYFGPYMPDIIAHRGASFELLAGHMFLTTEG VFGVPVGVSTSFIYLFVLFGALLERAGAGQYFINVAFAILGRFCGGPAKASVIASGLTGM VSGSSTANVVTVGTFTIPLMKKAGLTATKAGAIEVAAGVNGQLMPPIMGAAAFIIAEFLG MSYTNVMIAAVIPAFVCYAGLFFIVHLESCKLGLHGSRDYAKVSKLKIIFSGIHYIIPIL VLLFTLLILKESAISAAFNSICVLFLIMIVQEPAKKTIFGEKVGKSDFIVGFVDIFWAMV GAAKNMVTVAVATALAGIIIGSISLTGLGQVLSELVEAVAGNSIVLILLMTAIMSLILGM GLPTTANYIVVSSLIAPVILILAGKNGFLIPAIAVHLFVFYFGILADDTPPVGIAAYAAA GIAKANPVTVGLQGFVYDLRTAVLPFAFFFNNKLLLIQSIGDPMDSKSIVWISDPLQIVL IFATAIVGMFAFSSSLQGWFVTKCNPLERLLLLLVTPLMLVPNICTKFIEFIPSEYASYG IGAAIYALIFTKQWLLRPKDSGDTHAENSAPAA >gi|257441067|gb|ACYG01000032.1| GENE 43 44873 - 46996 2002 707 aa, chain + ## HITS:1 COG:VC0475 KEGG:ns NR:ns ## COG: VC0475 COG4771 # Protein_GI_number: 15640502 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Vibrio cholerae # 10 704 2 649 652 338 32.0 2e-92 MQKDMYFKKAKFIALSICASVSILCGVEGSHLSSDANSTNLGEIVVSASGFRQDIRQAPA TISTLDNKEISSGSFTSLHDIANKMPGVSVIAGDDGPASGISIRGMESSQTLVLIDGKRV SSAAANPKGGAGDMNSNFIPPAGAIERIEVIRGPMSSLYGSDAVGGVINIITKKNFSKFS GSATISTTIQDHEGIGDGKMGEAYVNIPFGQYAALQLWGYKKLRDEDGYKGGYQKSDKSD SNAKLWLTPDENNKFYVQTGRQNHDYSRTLGKTAVYPNARGLNHYKYKRENHGVGYLGEF ESLSADISYFWDKTRRTSIFDSLSPAIVKNRNFNSKFTTYLGINTLTFGYDFSKQDVQTT FIVSNANRQNLRSPQRFSMSEHAGFLEDEIEILENTLFLTLGGRLTHNEYFGNHFSPRAY ATFNIGDTWTIKGGVATGYKTPDVNQISPEVGTIQGGWRIIDFGNKDLKPEKSTTYEIGL YYDNADDLRGNITLFKNDFKDKILDTDGSNINRIPAYGGCAGAPSVNCPGWGTYFNIEGA EVYGVELSGDYDITKRLNFKANYTYSHSEIETGDPTIYTPNGAVKFSQTNLSRLDGKSLT ATPKHAAHATLNYRPIAPLSTFIGLNYESELTSVQFGPGNRVSKNDKKLFTTDLGAQYDL NDNLSLNLTAYNIFDNVRYDEGLADDGNYYWYPEEGRRFWFKVNAKW >gi|257441067|gb|ACYG01000032.1| GENE 44 46990 - 47892 582 300 aa, chain + ## HITS:1 COG:Cj1376 KEGG:ns NR:ns ## COG: Cj1376 COG2819 # Protein_GI_number: 15792699 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Campylobacter jejuni # 4 291 1 259 269 150 35.0 3e-36 MVSLKSFLAVFNALFLACLFACDLGAKPPQKIERISEAAREMFNVSDFILKSKSGEKYKI FIARQKNIARYDRVVFMVDANAQVAMLLNSYAQIYAGLNSAKENAETGPKLNKTVLIVGI GYDSPLAYDTKRRTRDLTPAASGEEYANGGGAAEFYDFVKDELFPLVEKKYSTAKSDKIY FGHSFGGLFGIYALLRDDGIFDEFFIASPSLWWGESQLIRDALDEGKLRSNLKAKFIMLV AGSREMRKGKTDKAGILKAADLAEILKTKGLSCEFKLYEGASHGEVIPLALRDLALFTQR >gi|257441067|gb|ACYG01000032.1| GENE 45 48062 - 48310 373 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461397|ref|ZP_05626493.1| ## NR: gi|257461397|ref|ZP_05626493.1| hypothetical protein CAMGR0001_1964 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1964 [Campylobacter gracilis RM3268] # 1 82 1 82 82 149 100.0 5e-35 MQSFKWQISKRLKQAMRERDIDNLTLVRRTDELYSRSHPGHDEDMRAEVYTVLDEYAPNV DIEIFDLVCKILDVKIELGKDA >gi|257441067|gb|ACYG01000032.1| GENE 46 48514 - 48972 422 152 aa, chain + ## HITS:1 COG:MA3263 KEGG:ns NR:ns ## COG: MA3263 COG1380 # Protein_GI_number: 20092079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Methanosarcina acetivorans str.C2A # 4 125 2 123 165 70 30.0 1e-12 MNYLIQFSVILGISFVAEILAALVPVPIPASIYGLVIMLLALIFKLIKVSQIRETVSFFM QIMPVIFIPAGAAIIIAGDALRQHLFAIIAITAVSTVVVIGASGAVTQIFYKIALARVKR RLYAAAHEQDGVNTKGVDAKLEREILSGDDKK >gi|257441067|gb|ACYG01000032.1| GENE 47 48984 - 49661 701 225 aa, chain + ## HITS:1 COG:MA3262 KEGG:ns NR:ns ## COG: MA3262 COG1346 # Protein_GI_number: 20092078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Methanosarcina acetivorans str.C2A # 1 218 10 227 238 177 49.0 1e-44 MNSAFFGVFLCLGSFELGLYLKKRFKLTIFNPLLIGIVLTVCVLLLFKIPYEKFNASASH ISFFLTPITVCLAVPLYEQLALLRSNFLAIFAGLISGMIAGLGSIYAMSVIFGLNHTMYV TLLPKSVTAPIGMGISESLGGIVTLTVACIIATGIIGSVFGEALLKIFGIKKAMAKGIAL GCASHAMGTARALEIGDVEGAMASLAMAVTGLLTVIGAGIFAHFI >gi|257441067|gb|ACYG01000032.1| GENE 48 49671 - 50237 872 188 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00438 NR:ns ## KEGG: EUBELI_00438 # Name: not_defined # Def: cytidylate kinase # Organism: E.eligens # Pathway: not_defined # 1 179 1 182 191 106 34.0 4e-22 MIISIARQTGAGGRETARKLAERLGYTYLAKADLLRKADELGCFEQMYEFYNEMPVNTLL QAISHNELANEQKRDRIVAIYEKIVSGGNVIVLGRCAGFFLRGHPDLLTVFLRASDEFKL ARLEKEGHTDAREYMENSDAGRMSFHQYYTNQVWGASANYNICIDTSYCGIDNAVNIIEY LVKHHIEK >gi|257441067|gb|ACYG01000032.1| GENE 49 50499 - 51890 1478 463 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0383 NR:ns ## KEGG: CCC13826_0383 # Name: not_defined # Def: putative cytochrome c family protein # Organism: C.concisus # Pathway: not_defined # 3 185 2 182 359 174 48.0 7e-42 MQSKAHLCPKCGENTIYFDGICHSCRQRQRREEILNLSADEVEAMILKIVDRIDEIEKWD EIYNDFWALFSLLGIHDPRIARAAAAAEIYCPPELYFGAPKDVRDALVRKLASIQDNAKN TLNDLLCALAWQGDEQTTQLFYELYQNPRPWRQKLYAGTEIYAQIGGCSFDRMGERKSLV FDKCLTAVRAKDSAEKNGGGASERGDESADEILNFKGSAGGANSEQNAQNGADEISNLHA GAQSARTGMDEDAILQNERANFKSDAQKYASDSSNLSENAKDACEDANQNADEPVRIGRP TGQKCEFCGCEMLDMLRLKASEPQLAFLNLKHDAIFRCCPTCIGSVIYFCKRGADGELEL SYEGEWMEKSYFSQQDMARLSGMKFKLSDEVSPFYGCFDELDVTVGGYPQWVQDATYLSC PSCGGTMKHLAQIPFGELVQGEGVIYVQICEKCEILGGCFQCT >gi|257441067|gb|ACYG01000032.1| GENE 50 51975 - 53033 1334 352 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1328 NR:ns ## KEGG: CCC13826_1328 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 17 352 9 342 342 377 54.0 1e-103 MGLFGLSKKAEKAQIPSTFAGRVDKFWAEFSGAIDEIKANLAAEEFEKAMRKTDEKLRIC LAEPYFMTGLAGDKLDLVLTPEGMRHRLFWLSFIKNAMPKQLESKMRCTLGKPRAPRGIG GLEMYGTRVSAEESMIYAQFNESDVDIKIYNENLAALLAQDEGKAGNLSFILLDNIIGET AVINTLGMLEVLDKPQENGVPLSEFADLIDEKFGEKATREPLKNFFSYEMQPRGSEVRED VIVGTTCLRNLIGEYLGGKRDIYNEAFELGIKFCFLSIGNGGDMQAGFDLRNKIEDEELE SCGSFLEIIGGATGQRHAYIDLICYDEERLKEKVSELCKKYGANIEIHDFKR >gi|257441067|gb|ACYG01000032.1| GENE 51 53827 - 54063 145 78 aa, chain + ## HITS:1 COG:no KEGG:FN0968 NR:ns ## KEGG: FN0968 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 11 78 177 244 247 77 52.0 2e-13 MSAPIVLFKLTPNIHKVAINSQLNAMGFYLDADFVWQSLAEFLSAKKDASAPAGTIPNDI KIASKGFDVKRSFRPEMK >gi|257441067|gb|ACYG01000032.1| GENE 52 54254 - 55396 1147 380 aa, chain - ## HITS:1 COG:Cj0585 KEGG:ns NR:ns ## COG: Cj0585 COG0294 # Protein_GI_number: 15791945 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Campylobacter jejuni # 1 378 1 380 380 384 53.0 1e-106 MKIYKISNEADFALICERIGVRNAGRAIMQKKSRLNFFYLKDLRAPAANILKQDALSIGA ELACNEGVILGRDDTDAVLIANDRQIEALAQKEALQDFGLKELAKFLSEKFTKPQSCEIM GVVNINSDSFNPASRAASLKEAICKIEKMIEQGAAIIDIGGVSSRPGSQYCGRDEEFARI KDVLSEIYRLRLHEKAKFSLDSFDEYCLEFALDRGFSIINDISANLALAPLALRYDAAYV LMHMQGKPQNMQLAPKYDDLMGEIDEFFAQNLQQLQSAGLKKIILDVGIGFGKTAEQNLV LIKNLEHFLHFGCPLLVGASRKSVIDFYSPSAVADRLAGSLYLHQIAALNGAAIIRTHDV FEHVQMLRLMRAMDAAAVKF >gi|257441067|gb|ACYG01000032.1| GENE 53 55393 - 56013 498 206 aa, chain - ## HITS:1 COG:Cj0584 KEGG:ns NR:ns ## COG: Cj0584 COG0470 # Protein_GI_number: 15791944 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Campylobacter jejuni # 4 206 3 199 199 103 37.0 2e-22 MKIINQIVLTNDYEGFKDKILAEIPRKNLRFFESTELKIDEARKIIDEAYVAEREDKIIV ISATKFGEEAQNALLKILEEPPKNTVFFLITPFINALLPTIRSRLIVQNLCVRKPRYRTG LSLTRLSLKEAVEFIDAQIALERKGELDKTALKALIGEIALECFEAGVSLSGDELQRIDR LSYLAEHNAKAHAVLTPLLLMIEEKR >gi|257441067|gb|ACYG01000032.1| GENE 54 56010 - 56543 791 177 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_1569 NR:ns ## KEGG: CCV52592_1569 # Name: not_defined # Def: hypothetical protein # Organism: C.curvus # Pathway: not_defined # 1 177 1 180 180 197 59.0 2e-49 MQDLHTWSVTAMRSEPGLEWLEDRKEDWTPLLASKLKFLHDGFAFIVICDDERSWFSEYI IKKINSSTNSRPLLPFFSLRSLYRGGVNSLEDALLLNDMLSLAFANGFIYFYIGNGNHPL AKIAKSHEDSYLWLIDERLQNSFYMSESDPSLDLKLIQLFKILDKSIDAVLFDEVVL >gi|257441067|gb|ACYG01000032.1| GENE 55 56543 - 57748 1527 401 aa, chain - ## HITS:1 COG:Cj0582 KEGG:ns NR:ns ## COG: Cj0582 COG0527 # Protein_GI_number: 15791942 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Campylobacter jejuni # 1 401 1 400 400 551 76.0 1e-157 MLIVQKYGGTSVGTLERIEAVAQRVIKTKNEGHDVAVIVSAMSGVTNQLIEQAEFFTKTP IGREMDVLLSSGERVTSALLAIALNAKGYAAIAFSGRGAGIVTDNFHTKARIVSIDPKSM QEALKQGKIVVVAGFQGISTAGEVTTLGRGGSDLSAVAVAGALNADLCEIYTDVDGVYTT DPRIEPKAKKLDRISYDEMLELASLGAKVLQNRSVELAKKLNVNLVTRSSFNDHEGTLIT GEEKMEDAVISGIALDKNQARITIRNVEDRPGVAAEIFSALASKEINVDMIVQNIGRNGE TNLGFTVPQNELETAYRVMKEVNPNPNSIIESDADIVKVSLVGVGMKSHSGIASKAFKTL ADEGINIQMISTSEIKISMIVEAKYGELAVRALHKAYDLDK >gi|257441067|gb|ACYG01000032.1| GENE 56 57748 - 58218 480 156 aa, chain - ## HITS:1 COG:Cj0581 KEGG:ns NR:ns ## COG: Cj0581 COG0494 # Protein_GI_number: 15791941 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Campylobacter jejuni # 1 156 1 156 156 215 66.0 2e-56 MEKEKNYRPNVAAIVLSPSYPFNCEILIAQRSDIKGAWQFPQGGIDDGETPKMAIRRELG EEIGTSKVDIIAECPKWLSYDFPDGVAQKMRPYDGQIQRYFLVRLRSLADININTKLPEF DAFKFVGANEVLRHVNHFKKPIYATVLKYFKEEGYI >gi|257441067|gb|ACYG01000032.1| GENE 57 58355 - 59428 900 357 aa, chain + ## HITS:1 COG:Cj0580c KEGG:ns NR:ns ## COG: Cj0580c COG0635 # Protein_GI_number: 15791940 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Campylobacter jejuni # 1 350 1 354 355 310 46.0 3e-84 MHIYIHVPFCTSKCPYCAFGSFSDKFSLAKSYFRALKLEVRDFLAKNPHAQISTLFIGGG TPSAVDAGLYDEIFALLAPHFTAKAEISSEANPNSASPAWLRAMCELGVNRISFGAQSFN DAKLKFLGRAHSAAQIFLAVQNAKAAGFDNINLDLIYASKFDDKRNLKFEMDALARCEVP HLSAYALSLEENTPFFGRESFKRESVALAKFLFALAADSGFRQYEISNFAARGLRCKHNL AYWRGEDYVGFGAFAVGTSAQMRLSSPKNLQDYIADPLQKQREALSAQDKKLERIFLGLR CVLGFEAQILDAAELSNAQLLVREKKLKFAEGKFYNLNFLLADEIALFITQESRHGR >gi|257441067|gb|ACYG01000032.1| GENE 58 59486 - 60208 974 240 aa, chain + ## HITS:1 COG:Cj0579c KEGG:ns NR:ns ## COG: Cj0579c COG1826 # Protein_GI_number: 15791939 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Campylobacter jejuni # 4 93 1 90 138 88 53.0 9e-18 MFGISMPEITVILIIAIIVLGPEKLPKVLVELAKYFKVIKKTINDAKSSFDQELRIAELK EDAKKYKESITQASEGVRKKLTFEELDEIKGGIDSVKETLNAGLKDAESSLKETLSSDAA KDALNSAKVSAQKQSETANLKSNSSGENSAQSSARAANSTQDSADGAMNSGAESKSANSG TGNKGKNFMPSTDGGAGNSAQNTNASSEAKSAAQNFNANLNGDAQNSMQNSAQNSDTQKS >gi|257441067|gb|ACYG01000032.1| GENE 59 60224 - 60979 912 251 aa, chain + ## HITS:1 COG:Cj0578c KEGG:ns NR:ns ## COG: Cj0578c COG0805 # Protein_GI_number: 15791938 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Campylobacter jejuni # 1 243 1 244 245 232 56.0 4e-61 MFEELKPHLAELRKRLVICVLSVIVLFIACFGFWENILGFMTRPLVRVLPKGSEIIFTQL GETFFTAMKVSFFTSLLLAMPIIFWQVWLFVAPGLYDNEKKYVIPFVSGASIMFFLGAAF CYFFVIPVAFNFLVNFGAKQFTAMPTIGEYVGFFAKLVVAFGISFELPVVTFFLAKIGLV TNKSLSDFFRYAIVIIFIFAAVMTPPDVLSQFMLATPLIALYLLSIFIAKMINPYKPEDD ESENSTDVAQA >gi|257441067|gb|ACYG01000032.1| GENE 60 60981 - 62000 938 339 aa, chain + ## HITS:1 COG:Cj0577c KEGG:ns NR:ns ## COG: Cj0577c COG0809 # Protein_GI_number: 15791937 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Campylobacter jejuni # 6 339 6 342 342 410 58.0 1e-114 MADLNLVGSYDYELPSELIASAPVMPKQSARLLIYDRAKQQITHAHFGDLADALPPCDII FNDTRVIKARLFGHKNSGGKIELLLNSPLEGNKFSAYIRGSVKVGSELKFQSGLEARVCE LMEGGLRIVQFECGGKALNTHDVFEICERIGHVPLPPYIKRADTKQDVSWYQSIFAREQG AVAAPTASLHFNDAMLNDLRKRHEIYFITLHVGAGTFKPVEVADLREHKMHGELYSIPPQ TTQILKSERKILGVGTTVTRTIENFARNGQSSGICELFLHPGNPPIRQNFLLTNFHLPKS TLIMLVASFIGLERTLELYRIAVEKRYRFYSYGDGMLVL >gi|257441067|gb|ACYG01000032.1| GENE 61 61997 - 63034 1058 345 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461415|ref|ZP_05626511.1| ## NR: gi|257461415|ref|ZP_05626511.1| hypothetical protein CAMGR0001_1982 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1982 [Campylobacter gracilis RM3268] # 1 345 1 345 345 667 100.0 0 MKAVVLGALAILAATAGFAARKLFAKKPAASGKIFSAVPKAKESDSVVLRREDIAQIDIL KILKFQSEILFEECTKYDSTLYLSFPPQLPRIYGGEVLNLTSAVFDACEFFLQNIAEPIR VSVEFSSKELRANMSSIKLDVRVGIDRELKDPRTYALKSALESAASTDDEYLTSAQTHLR ALGSHPSIGADGRGTFIKMDAVLSCFAQQSFSAKKYDYNVIITHKNRAIFEELRDFLNGL GCDVMPNSNWESAKRHLNDFIYVADVVILDAEILRANISEINYLNALEKDGVFFIFLLKN KHSLKVLEGLNFKFFKLEMPYFYDEFYATLDLIEKIKNDENFLGL >gi|257441067|gb|ACYG01000032.1| GENE 62 63074 - 63526 289 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461416|ref|ZP_05626512.1| ## NR: gi|257461416|ref|ZP_05626512.1| hypothetical protein CAMGR0001_1983 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1983 [Campylobacter gracilis RM3268] # 1 150 1 150 150 281 100.0 1e-74 MLYFDLDWIKGNIKDSEYASREQRYEAYLAGLHKNMHALERIFAGISFNDALLLPKKQIN EKLHLKFYIGDLQNGYYELKCVMSSDQRCGAAAGEIITSEIFYENGNYRFSFILACLKEY AVNFSRIDSLKFNAISQKKYHFEHKKFKLL >gi|257441067|gb|ACYG01000032.1| GENE 63 63856 - 64350 425 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461418|ref|ZP_05626514.1| ## NR: gi|257461418|ref|ZP_05626514.1| hypothetical protein CAMGR0001_1985 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1985 [Campylobacter gracilis RM3268] # 1 164 1 164 164 293 100.0 4e-78 MNFFLGFLAGSGAFDGLAAAVIVFGVIAILGGFNAVIASIPAFIVFCVAKAFLEGLTSNV NNRFVTLVVPITGALVLAYFTADAVYKSEQAKDAEREVQKQQNMTQQDKVYYIQRSLMFG SYGVAIDGKWGKKTMQAAQKYSGSSATSIDELYEAVKAKKEGRR >gi|257441067|gb|ACYG01000032.1| GENE 64 64449 - 64745 322 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAENEHPDHLMCPFCGKDDIKYGAIVCGGCQAEISYSRPWLKTLLISILWLFFGGAFTKD SGTLFYIVLGIGVLGIIGSIFMARDHSPQFHRIMKHVK >gi|257441067|gb|ACYG01000032.1| GENE 65 64864 - 65124 416 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148306|ref|YP_001405849.1| 30S ribosomal protein S18 [Campylobacter hominis ATCC BAA-381] # 1 86 1 86 87 164 95 2e-39 MADKRKYTRKYCKFTEAKIEFIDYKDTALLKHCLSERFKIMPRRLTGTSKKYQEMVEKAI KRARQAALIPYIVDRKGVVVNPFENL >gi|257441067|gb|ACYG01000032.1| GENE 66 65138 - 65731 663 197 aa, chain - ## HITS:1 COG:Cj1071 KEGG:ns NR:ns ## COG: Cj1071 COG0629 # Protein_GI_number: 15792396 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Campylobacter jejuni # 1 197 1 183 183 167 52.0 9e-42 MFNKVVLVGNLTRDIELRYLQTGTAVGKTGIAVTRRYNSSNGEKREETCFIDIDFFGRTA EIANQYLRKGSKILIEGRLKLDQWQDQNGQNRSKHSISVDTMEMLGSNQGGSGGYNQGGN YEGGNYGGSSGGYGGGNSSYGNYGGGNSYANRQNSNSRGAKNDYNAPKQKEQSYESTIPE VDVDADKYDDGNDTIPF >gi|257441067|gb|ACYG01000032.1| GENE 67 65742 - 66155 529 137 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148390|ref|YP_001405847.1| 30S ribosomal protein S6 [Campylobacter hominis ATCC BAA-381] # 1 137 1 138 145 208 76 1e-52 MRNYEVLFIVKPTLTDDEVKTKVDFVKEIITKNGGEIASVIEMGARKLAYKIDKYERGVY FVIYFKAEPSLISELVRNLRITEDIIRFLTVKYETKREISAWDKLSKGIKLSPAKKEREP KAPVEPKEPEEAAKEGE >gi|257441067|gb|ACYG01000032.1| GENE 68 66240 - 67244 1118 334 aa, chain - ## HITS:1 COG:Cj0630c KEGG:ns NR:ns ## COG: Cj0630c COG1466 # Protein_GI_number: 15791990 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Campylobacter jejuni # 1 323 1 319 321 196 37.0 7e-50 MYRKEFDGLIASGRVPNFVLLRGGDDFSNELYAQRLKQIYAAENFLSLYFLEYDFEQARS FLEPSLFGGSNTLHIKTASLIKKEELRRLIALCKSDANNHLIYELNDSEISVSADFVKEF ERNEVRFFKPSGVNEAIALLAQKCEMCGLFANTAALSRIYAIHNESLSLSASEIEKFASL GLELNLQNVNLMVYGLSEVSYDELFDKIFSLCDFRVDFYKMALGGGYNEMELINYFYRLI YRIFRLHAYVKINGRFDFKAVLGYQPPPSVAAQMQRYATSFSTRTFYKIFAHLNDLEFEL KSEKNAAKDELLLASFLRLQRMLLSSLGQKANIK >gi|257441067|gb|ACYG01000032.1| GENE 69 67244 - 69169 547 641 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 614 20 657 730 215 28 1e-54 DMKEFLRAFNSGVFEKDLSGEQKELVRNLLNIGAISAHKGKLYLNDGYVFGRLDIARDGT GYLQSFDDRFKADLIIENRYLSGVHLGDLILAKILSSRKPRLHAKVLMCVKPAFLTSVVY TKSFGREILGVNVKTGLANPLKATQKSLKQLPANTLLKIDNLTNEITEVIGSLADPFVDE KISLAIYDKNDEFNEACKQQAASFGSEVDEALYPQRVDLQHLPFCTIDPIDAKDFDDAIY FDVKERTLYVAIADVSEYVSEYSPIDKEAKFRGFSIYFPHRSVPMLPRELSENICSLMPN LPRLAFVFKIALDENLNPQKQELFEAIIRSKRRYDYDEVDEILRTRKASEPEILSWLLPL NEICERLRRARLKRGFDFRTKELRITLDERGLISSTRFETDTPSHKLIEDCMLLANKAAA ARIERGVFRNHGSAELKKIYALLDDLALFGIDAPYQSNLAKMIGEIQAQADAMGIREEVD KLIIKAQKRAEYGSESRGHFGLGFDNYTHFTSPIRRYSDLILHRLLKAQMRGDEKFYNYL LLNIDATCARLNELEREADKVAFDFMDRKFARWAAENLGKKFRCYIDENGNSVTAKLDDK LKGAKIFVSNFAGDILTPVLVELTDANIASGVILGRVVKKI >gi|257441067|gb|ACYG01000032.1| GENE 70 69163 - 70425 924 420 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0373 NR:ns ## KEGG: CHAB381_0373 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 217 420 61 264 264 199 50.0 2e-49 MNKFITQKIGALAGFSDEILKILASFDADVSNVRLALQISKNAPLADKILDLAFCGLSKF SAEGLARQNFTAANGRCYLQSTEPVKSIGCHLQDAANDWLQNECTSSEQKGADLAGRSDS LKFNHSNDANGANCSDENFKFNLSQAASDTQQQNQHAAAKADCALGSSISAQAERAPGRE QIQTQQQKQEQEWERAQEQGQEQGAAALKTLNLQQPFGNLQRAFELYGREQMRAFFLFAI FDEMLKPSLQAYRIDREKLTQVSLLRNLLMFSWIKSYPQIEQSILSSVILVEFGRVFIDE QVCAAGKAEEFYHAIKGSIFPQDFTDVEMKFCGTNRESVSHALFAHFGLEQIAQDELYSN APDDVPFENKSRYAMLKIAKTAVNIYHHFDELSIDNALNLLVEFGFEQEAFLEAKGEISI >gi|257441067|gb|ACYG01000032.1| GENE 71 70893 - 72017 944 374 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461426|ref|ZP_05626522.1| ## NR: gi|257461426|ref|ZP_05626522.1| hypothetical protein CAMGR0001_1993 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1993 [Campylobacter gracilis RM3268] # 1 374 1 374 374 728 100.0 0 MRSIVFLFIIPAFFTISFFVALIAPKGKRKRFWLFVWFVVFFGDGFIVSAIFHCYGYLYG KINVYEKPAIRAYYAGEKKFDLGFPKANQFSSQDYTKDIAFTMLINGDLDYIDYRVQAKD SANNGKFFRIYVDNNTSNKCFMSIDEELKDYLSDKKIPYSEFKQLYDEYHSKPGEYKEIY YDAWFDNEERKKSYPQQQRIVVDKIIKIVQERYRSPNPINMNGKVFTWDDYQIKRVIDRL QDVDKKMEYYKQIYKDKCIARKEISKDEIAPTELIVEDPYHLLEPKPNIKTIFDNMLGMG FNYGGIIKDINTGKILADNIYIYESYHTWILQALVSALGPQSGGEFWMCNKNETNSIEKC NQKMIEEFFRKDRK >gi|257441067|gb|ACYG01000032.1| GENE 72 72300 - 73259 474 319 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461427|ref|ZP_05626523.1| ## NR: gi|257461427|ref|ZP_05626523.1| hypothetical protein CAMGR0001_1994 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1994 [Campylobacter gracilis RM3268] # 1 319 1 319 319 528 100.0 1e-148 MKKLFKILFIIFILFTLCLIISFAYQLYKDDKRHIAELEAMFDKYDKVKYLENKIDFKTA TEHEKINFYIKDFLKKIHYLDNYPAKDIKKMKNIHRDINDFAETRFYFCNGDKYPDDKCE FFKLDKRLNLEYLLNLGSKICNADTPMQNAQEIIDNDEILKIEPFYPFNEKYIIDENGKF LENFVYIGENKHILFSDFVFINKKVLKYHDTKNDIVIASNIMFSWLLANAIVNNEISEFC VTHNLLTTNKKRFFEKTYGREYYFKYIPANRPTLQNIVFNDFSYNGDYYYNAILEQYQTL KNNNFNKNLNLQGDGNAEN >gi|257441067|gb|ACYG01000032.1| GENE 73 73246 - 73521 294 91 aa, chain + ## HITS:1 COG:no KEGG:APP7_1051 NR:ns ## KEGG: APP7_1051 # Name: not_defined # Def: RTX toxin protein # Organism: A.pleuropneumoniae_AP76 # Pathway: not_defined # 4 87 165 247 1002 73 50.0 2e-12 MPKIDLNGDGVKTISRKNNKIYFDLDNNKFAENISWIDKNDGILINKTLITNSITNGSEL FGNHTLLNDNSLTPNRFEALKEFANLNLLIV >gi|257441067|gb|ACYG01000032.1| GENE 74 73773 - 74438 412 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461430|ref|ZP_05626526.1| ## NR: gi|257461430|ref|ZP_05626526.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 221 1 221 221 389 100.0 1e-107 MRDYDKAPLIIKNNFIMIMYGFTFLLVCNTIMIYIVFFTGVVDWNSGEFFEILKNEMRNP RFSFMVVAFPIANIWAFIDFIRKFRKPEKVYLYNDKVYWDKRDTTVEKQNIVLVRKSIYP MIGKIPDNSVQKIFAPFGFVIAGFFLILSNLLACLAKLVALLINKDYKFILFCTIVFYDN QKNAVNVYLMTKQDYEQVNEYLLQNFNLQIENLDKNYKFYK >gi|257441067|gb|ACYG01000032.1| GENE 75 74450 - 74602 110 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461431|ref|ZP_05626527.1| ## NR: gi|257461431|ref|ZP_05626527.1| hypothetical protein CAMGR0001_1999 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_1999 [Campylobacter gracilis RM3268] # 1 50 1 50 50 81 100.0 2e-14 MPEDNNTSNNSSQGVAWYIKPTSDTIDFIKGIPVNVLADPDNVKVFDRLN >gi|257441067|gb|ACYG01000032.1| GENE 76 74595 - 75296 498 233 aa, chain - ## HITS:1 COG:NMA0769 KEGG:ns NR:ns ## COG: NMA0769 COG3676 # Protein_GI_number: 15793744 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis Z2491 # 10 217 3 208 217 124 38.0 1e-28 MMRSMKNKYIYRSRISQKKFREILKYFAEDIEATKIANLTGISRISINKILKSIRVLISQ ECENISKFSGEIEIDESYFGAKRVRGKRGRGASGKQPVFGMLKRDGKVYTQIVKNCSANE LIPILSQFSELDSSTIYSDCWKAYDGLVDYGAKAHYRVKHSKNEFANGKNHINGIENFWG YAKHRLSKFKGIKKENFLLHLKECEFRYNTKTIQENLYQKLLKLIRENPLKFN >gi|257441067|gb|ACYG01000032.1| GENE 77 75235 - 75678 281 147 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEVFTKIKDNPIFKSDPDKVVRNFILPQYKRTMVEVLDDFIAVKFYSSLSRDGTVKTHR HYHYTQGGKLIKALGNADEITFEGARILLKKLISNSHTNGVTAPKNTLASVFKLALFNLS SRKGVARYDEKHEKQVYLSFPNFAEEI >gi|257441067|gb|ACYG01000032.1| GENE 78 76084 - 76422 435 112 aa, chain - ## HITS:1 COG:Cj0936 KEGG:ns NR:ns ## COG: Cj0936 COG0636 # Protein_GI_number: 15792265 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Campylobacter jejuni # 1 103 1 109 112 73 57.0 7e-14 MKKVLVLLFALCGAAFASEQLSAYTQIVSFSAITVAVVLGLAALGGALGMGNAASATLNG IARNPSVASKLSTTMYISLAMIEAQVIYALVIAFILLFANPFVTEGLAAAAK >gi|257441067|gb|ACYG01000032.1| GENE 79 76580 - 78094 1901 504 aa, chain - ## HITS:1 COG:aq_2090 KEGG:ns NR:ns ## COG: aq_2090 COG0119 # Protein_GI_number: 15607049 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Aquifex aeolicus # 5 497 8 503 524 501 54.0 1e-141 MDKNKIIIFDTTLRDGEQSPGASMNTDEKIHLALQLEKLGVDVIEAGFAAASPGDFDAIE KIASAVSKARVCSLARALEKDIKAAGEAIKGAKLGRIHTFIATSPIHMEFKLKMQPQEVI KRAVESVQYAKSLCDDVEFSCEDACRSDMGFLKEICDAAINAGASTINIPDTVGYLYPDE ITARIGEIVKLIGERAVVSVHNHNDLGMATVNSLAAILAGARQVECTINGIGERAGNAAL EEIVMAIKTRKDKFAPLYTDINLKEIYPSSRLVASITGIEPQPNKAIVGKNAFAHESGIH QDGVLKHKETYEIMHAEDIGLDKNSLVLGKHSGRHAFKDKLVSLGYELSNEQIEIAFNKF KALADSKKDVFDEDIRELVNDEFVGAEKTYEVLVLSSNSCNKGHASTALTLRYKDEILSD SALGNGGVDAIFKAIDRISGISGSLKDYQVKAVSQGKDALAKVTVKVEFAGEGAIIGRGL DVDTMLASAKAYVAALNTYLDAKH >gi|257441067|gb|ACYG01000032.1| GENE 80 78179 - 78928 711 249 aa, chain - ## HITS:1 COG:Cj1114c KEGG:ns NR:ns ## COG: Cj1114c COG1183 # Protein_GI_number: 15792439 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Campylobacter jejuni # 7 243 6 241 242 255 62.0 6e-68 MEEEKGKLIYILPNFFTAASIFLAVISIISTIKGNFSAAIFYIILSLICDGLDGRVARLT HATSKFGVEFDSLADIVAFGVAPALLFYCAVGHDYGKVGSLVAALYVVFGAIRLARFNVT TGTYEPSVFIGLPIPTAAITMAFWIGIYLKYDLSKGFGVFLIIAMAALSFLMVSNIRFPS FKKISLKRPNAIKILVLLIVVFFSLLYLFRLEFPAVLTLVYIVYGLVRGALNLSAAKFHK KDKPEETAK >gi|257441067|gb|ACYG01000032.1| GENE 81 79055 - 81004 1232 649 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 26 647 13 622 636 479 42 1e-134 MNNNPNNQPPQNGGGNNFFNKNPIGVFIIFALILIVVFKAISPSGGFDSGGVLGSVSGES RNVTYSELKSQIKNSQVSMVSIGSSTIKAQVGNVIYTAKRVDDPELVQILESRKIPYGAY NESNFLTDLLFSWVLPLVIFFGIWMFLANRMQRNMGGGVLGIGSSKNLVSAEKPKVKFSD VAGVEEAKEEVKEIVDFLKNPERYISLGAKIPKGVLLVGPPGTGKTLLAKAVAGEADVPF FSVSGSSFIEMFVGVGASRVRDLFDNAKKQAPAIVFIDEIDAIGKSRTAGGIGGGNDERE QTLNQLLAEMDGFGSESSPVIVLAATNRPETLDAALLRPGRFDRQVLVDRPDFDGRMAIL KVHMRDVKFARDIDIEEIARLTVGFAGADLANIINEAALLAGREAKAEVEQKDLLEAIER VGIGLAKKSRRVSPIEKRIVAYHESGHALIAELTKGAMPVSKVTIVPRGLSAAGYTLNSP FENRYLHQRHEIFAEIDTFLAGRAAEDVFLGEITDGAGNDLQRATDMLKFMATQVGMTEA LGLAVLEKQQYSFLNGGQSIKDYSEVTAVKIDEYVRKTLDERYAAVKETLRTYAPAIEEM VKALYEKETVSGEQIVEIISKFEKDNGMPTRLVRNLGANDDIESAKSEA >gi|257441067|gb|ACYG01000032.1| GENE 82 81001 - 81864 864 287 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154148737|ref|YP_001406076.1| ribosomal protein L11 methyltransferase [Campylobacter hominis ATCC BAA-381] # 1 285 1 300 301 337 56 2e-91 MKDFFYEMIVKSANASELFKNFAFELGVTCVEERGERFIIRDEEDPQNLKFAFEEFKKAL ARSLNLDADLQIEISKKPNVDWIEQYKKGVAPVAVGKFYVRPSWCERSQDCALIDLLIDP ALAFGSGHHESTNMCLALLSELARDGMSALDVGCGSGILSIAMKKLGAKVSACDTDEQAV AATQQNAEKNGVQIDQIWLGSVSSLNERGSSAAAQPQFDLVVANIIADVILILSVDLKKA LKPGGKLVLSGILEKYKDRIERAFSDLDFVQMKKQNEWLSFVYERKI >gi|257441067|gb|ACYG01000032.1| GENE 83 81943 - 82650 850 235 aa, chain - ## HITS:1 COG:mlr5014 KEGG:ns NR:ns ## COG: mlr5014 COG0106 # Protein_GI_number: 13474184 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mesorhizobium loti # 1 235 1 239 247 202 47.0 5e-52 MEIFPAIDLKQGCAVRLSKGEMQSAKIYSKDPCELAKKFEDLGAKWLHLVDLDGAFAGEA VNFKAIERIVKSTRLRVEVGGGIRDEARIKEYLNLGVDRFILGSAALKNRDFVRRMTKLY RIVVGIDAKDGLVATEGWAELSRVKATDLARDYADAGVCAIICTDISRDGMLSGVNVEFS RSIAKASGIDTIASGGVKDINDIIALKNAELIAGVIVGKAYYEGTLDLKKAFEAL >gi|257441067|gb|ACYG01000032.1| GENE 84 82650 - 83309 583 219 aa, chain - ## HITS:1 COG:MJ0506 KEGG:ns NR:ns ## COG: MJ0506 COG0118 # Protein_GI_number: 15668683 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Methanococcus jannaschii # 10 219 26 197 198 155 41.0 5e-38 MNALSFCGAKFTLARSGEELLSCDKALLPGVGAFGEAMDRLRASGMDAAIKEFVASGRYF LGICLGMQLLFEQSEEFGARSGLGILPGRVVKFDKTKFNNREAESGSEDMKFRSDGVEPS EHGGQNFTCVESLKIPHVGWNSAHFIKHSPINVGLGEFEYLYFVHSYHVLCEREITLAST FYGYEFASAIWRENVFAFQPHPEKSHDAGIKIIKNFTEL >gi|257441067|gb|ACYG01000032.1| GENE 85 83351 - 85156 1900 601 aa, chain - ## HITS:1 COG:Cj1120c KEGG:ns NR:ns ## COG: Cj1120c COG1086 # Protein_GI_number: 15792445 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Campylobacter jejuni # 7 592 5 585 590 647 57.0 0 MLLKPTKFSRFAFFLLGDIFISILSVYIAFLLRFSGDIPNEFYKGALLSASSLTAIKIFY FWFLRIYLVPWRFFGLYEARKLFYAHVMAALTFLILFFLASKIFNPFPRSVIIIDAAISF ILIGGIRISKRMFLSEKKNITNNEPCIVVGATSKTFHVLKGMRQKYINYYPVGVVDGRPE LVGTYCENYVVRAKSEIPQMIKDSGAKTAIIALALYPDELKQLYDELFAYGLKDIKLFSL LEDESKKIRDVSIEDLLARKPKDLDTKAIENFIKDKIVLVTGAGGTIGSEICKQCLKFGA KRLIMVEHSELNLYSINEATGADARNELKMINVVYRHELEEVFAEFHPEVVVHAAAYKHV PLCEFNPHLAVKNNVIGTKNVIDLSKKYGAKKVVLISTDKAVRPTNIMGTTKRICELYAL NSNDAASDTQIVAVRFGNVLGSSGSVIPKFKRQIEANEPLTVTHPEITRYFMLVSEACQL VLQAASIAQGGELFVLDMGEPVKIADLAKRMLQLAGKEELGIKFVGLRPGEKLYEELLID ENDKSTKYQSIFVTHSAKYDLQELSSQIEELSECEDAQVADKLKRIVPEFSHRLNDMKGT A >gi|257441067|gb|ACYG01000032.1| GENE 86 85156 - 86253 1326 365 aa, chain - ## HITS:1 COG:Cj1121c KEGG:ns NR:ns ## COG: Cj1121c COG0399 # Protein_GI_number: 15792446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Campylobacter jejuni # 3 365 2 384 386 433 57.0 1e-121 MARVFLSPPNMGGNELEYIKKVFESNYIAPLGEYVDRFENSIKAYTKTRGALALNAGTAA LHLALRCSDAKDGDVVLGSTFTFMASLNPIFYERCVPVLIDSDESWNLSPKLLKEAIKKS PKKPKVLVVTHLYGQAAKMDEICEICANEGIDVIEDAAEALGGFYKGKTLGGIGKCGALS FNGNKIITTSGGGMLISNDEELVAKARFLSTQAREPLLHYEHKDYGYNYRLSNVLGAIGV GQMEVLPQRVKRKREIFKIYEDLFRGTDVEFMPEVEGGEGNRWLTTLLFKQKGAHLKVVD ALNKADIESRPLWKPMHLQSIFAGALSVVDGTSEDMFSRGICLPSGTDMSDETIERVVKI VKENI >gi|257441067|gb|ACYG01000032.1| GENE 87 86370 - 86969 650 199 aa, chain - ## HITS:1 COG:Cj1123c KEGG:ns NR:ns ## COG: Cj1123c COG0110 # Protein_GI_number: 15792448 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Campylobacter jejuni # 3 193 4 193 195 178 49.0 5e-45 MDTTKIYVYGASGHGLVVADVALAARGAKFNEVVFLDDAAGLKFSEDLPKHPVIIAIGDN KTRAKIQERVSRAGFEIATLIHQSAIVSPSAAIGEGAVVMPGAVINARAKIGRGAIINSG VVIEHECEIGEFAHISPNAALAGGVKVGAFSHIGIGASVIQRLSIGQRCIIGAGAAVVRD IASDSVAVGVPARVIKKNS >gi|257441067|gb|ACYG01000032.1| GENE 88 86956 - 87561 677 201 aa, chain - ## HITS:1 COG:Cj1124c KEGG:ns NR:ns ## COG: Cj1124c COG2148 # Protein_GI_number: 15792449 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Campylobacter jejuni # 1 201 1 200 200 266 67.0 3e-71 MYRGFLKRALDFTAALILIILVSPVMALTWFLIRKHISKSTIFTQSRPGFDEQIFKIYKF KTMSDERGADGELLPDEERLNDYGKKIRALSLDELPQLFNVLKGDMSFIGPRPLLIEYLP LYSPQQRLRHSVRPGITGLAQVNGRNAISWEKKFEFDTYYAQNLSFALDLKIALLTIKKV LAKEGVNKEGMATTEKFNGHN >gi|257441067|gb|ACYG01000032.1| GENE 89 87554 - 88681 950 375 aa, chain - ## HITS:1 COG:Cj1125c KEGG:ns NR:ns ## COG: Cj1125c COG0438 # Protein_GI_number: 15792450 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Campylobacter jejuni # 3 373 2 373 376 341 50.0 1e-93 MARIGFLSHADMSLHFFRRPIMQALKERGHEVFAIAPRGAYTQDLARDFNAVTYDLDRAS LNPFTVFSNTKALARELKRLNLDLLQTAAHKSNVFGTLAAREAGIKYVINLVEGLGSFYI DDDIKTRLVRAVLEKLYKFSFSQADACVFVNDADPDYMLSRGLIAKQKVIRIKSVGVNAE RFNPEIVSAADLGEDLHGKKIVLMIARAMWHKGVREFYEAAEILKDRSDAKFVFVGEGFA GNKSTADPAFLRSGAVYYLGARNDVPELLKASYLLALPSYKEGFPRTVLEAMSMARACVV SDCSGCVEAVQEGVNGLICRTRDAEGLARKIEILLDDTALCERLGRNGREMVLANYDEKI VTEKYLEVYRKFIDV >gi|257441067|gb|ACYG01000032.1| GENE 90 88755 - 91535 2255 926 aa, chain - ## HITS:1 COG:Cj1126c KEGG:ns NR:ns ## COG: Cj1126c COG1287 # Protein_GI_number: 15792451 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for N-linked glycosylation # Organism: Campylobacter jejuni # 237 925 14 712 713 561 44.0 1e-159 MGEEKKAFSVREIDEGSDDQKDAQSMGADKAALSENFASEGNFDAGHSAGGGENFSGENA ELEGGEDAVPQSDKNSALDAKNSASKNSAQVGVKNLSDDQARAVSAKMRAQKKSKKAKKS SGRNSASVNSENSAGANSTNSNLKGAANSTSKNSTNKNSAGTANSTNKNSAKAANLTKFK NANSASALNSTNGINSDNSKNSTAENSQNSKNQSAGALPARRRIFGFIKNYEFSKHILLM ILLAFAFSVAFRMWWVHWASGFPNYFFWDGELMINTNDGYAFAEGARDRLAGFHQPNDLS YFSAPLSIVTAFLAEILPFKIETIFVYLPALFSSLIVVPILLISSEFRCMRAGFIGALVA SVANSYYNRTMAGYYDTDMLNIVLAMCILWALIRICTRGSRSTLFWLGVFVIFYMWWYPS SFSLNSMMLAVFFAYTLIFKRKSAVNYEAMIIFLIALCSTPLVAKILISLALFWLFAFRG KLLNFKILAIIGALAVVFFVANGGLSPIIFQAKFYIFRSFADNADTAFHFFNVNQTIQES GIVPPKIFMERISSHVAVFVIAAIGYLVLCFRHKEFLLSIPLLLLGFAANKAGLRFTIYA VGVMGLSFGYILYFCVKRLDLPKIAGRAILLILTALAIYPAWQHIVSYKVDTVFYQSEVR VFDELKDKAQREDYALSWWDYGYGIRYYSDVKTLIDGGKHLGNDNFPVSFALFRDQMSSA NMARLDVEYTERGYSEKIPNKLKQILKDYNATDVNDFILGLGLADFKPPKPTRDIYYILP DRMMNIFPVVTQFSNIDITDGKQLGELFFITSDRFVQDQSGVHMDNGFSISPNLLSLEFS GRKFAINTFYETSYDASGRLAVKELNMDSSAQFYVVFMRDYGRFLLLDKTMLNSSYIQLF VFERYRPELFEPVILSPAVKVYKLKR >gi|257441067|gb|ACYG01000032.1| GENE 91 91538 - 92656 1203 372 aa, chain - ## HITS:1 COG:Cj1127c KEGG:ns NR:ns ## COG: Cj1127c COG0438 # Protein_GI_number: 15792452 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Campylobacter jejuni # 1 362 1 360 365 395 56.0 1e-110 MKKLSVFIYSMAGGGAERVVSNLLGELTARYEVHLVLMNERIFYEIPSGVQIHFIEKSAP FENGLLKLAKLPFLALRYKKLCERLGIDIHFVWMNRPCYVAALARVYGLGGTMIFNECST PSVLYKEPSFKSKISKLLLRKLYPKADFIFPNSLGNLRDLADNFGIDERKMSVLYNAIDL DEISRKASEQVAQERPFFLSVGRLDAGKNHALLIRAYANLKNNDKDLLILGDGVLRAELE ALIEELGLGGRVKLLGFDANPYKYMARCYAFVFVSLFEGFSNALIEALACGKLVISSDHQ SGARELLGQSEWGVLVGVNDLESTQAAMQKALDDENYVKFYEKKAKIRASFFDKKRIASE LIAKIEQIDEGK >gi|257441067|gb|ACYG01000032.1| GENE 92 92902 - 93945 1154 347 aa, chain - ## HITS:1 COG:Cj1129c KEGG:ns NR:ns ## COG: Cj1129c COG0438 # Protein_GI_number: 15792454 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Campylobacter jejuni # 1 341 2 353 359 225 39.0 1e-58 MKILFVIAALRNGGAERVLQVLANHFARANDVTIAILENDEGRYKFSEKIKFLHLDVYKN GGRFDKYRILRECFKRERPSVIISFMDWTNVACVIASFGLGIPLIATEHNAHDYLRSGFF SRVRDLCYKKADALTVLTRSDFEYYSRFVKNCFVVYNPFFGEICDAKGAKRNVILSVGRL EPVKGYEIYFDALSRIDKSLLAKWEILIAGDGSLRESLHELVARLGLEVRFLGHKQDVSE LYKEAKIFVLSSLNEGLSNVLIESAFYGCARLSSDTAGAKELIKDGFSGILFKRGDANEL TSKLENLMRDEELRDALVQNANENLDEFSQERIIKLWQGLIDRFARK >gi|257441067|gb|ACYG01000032.1| GENE 93 93942 - 95207 721 421 aa, chain - ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 6 274 5 250 328 144 32.0 3e-34 MSVGPLISVIIPVYNVKEFLRACVERITAQTYANLEILLVDDGSNDGSEAICDEYAARDL RVRVLHKSNGGQASARNAALDVARGEFISFVDSDDLISLDLIETLFRLTQKFCTKIAMCG YAAFSDESEINNFKAALNSKENQNSKEISNPGGVANSNANAGEYKISPQELFRRSCTQDP YFSTAVWRALFAREIFTALRFPAGQIYEDVAIFFDIFNASIAAYTDEILYFYRVRAGSTV NSFARRHLAVIAAVRRYTEAIAANYPSLAREANFTRCESALNTAFLIIKSSFDAAGSDGD ATSPSEANTCSLANEADLRGADSLFCACSKNSVVKNSVGQNYMRNSKQNSASQRKTADPR SPLSAAEAADQIRSLHALVRERLDFGFFATHASRTQTLMMVLFYASPALLQLFYKIYRKL K >gi|257441067|gb|ACYG01000032.1| GENE 94 95207 - 96286 978 359 aa, chain - ## HITS:1 COG:Cj1129c KEGG:ns NR:ns ## COG: Cj1129c COG0438 # Protein_GI_number: 15792454 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Campylobacter jejuni # 1 352 2 354 359 256 41.0 6e-68 MKIAMVISALGKGGAERVLSVLANFFCRENEVCVIKFDADEPFYALDPKIELISLDLGVG DLGVFGNIKKRYDKILALHRLLKSRKFDIVISFLDNTNVLTLIANLGVGQKIIVSEHTNH RFLKSPIWRALKRIFYPQAAGLSVLSKFDLDHYTYVQNRVIMPNPMFEISHAKDARPPKE NIILAAGRLNVYKGFDVLLKALALIDFNLLKEWKVVIAGDGEERKSLESLAAKLRLNVQF IGFVRDIESLYERAKIVVVTSKMEGFCNILMESIFFGTARISTDCIAGPSELISDGVDGF LCPVGDSASIAKKLEILMSDEKLRERLVQNASKREESFKIETIGRRWLDFIAATIHREE >gi|257441067|gb|ACYG01000032.1| GENE 95 96288 - 97349 921 353 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0960 NR:ns ## KEGG: CHAB381_0960 # Name: not_defined # Def: putative WfaX # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 351 1 347 348 267 43.0 4e-70 MKIGIFTLPLVNNYGGILQAYALSRVLVELGHEPRLINLRLQRSKLSIAYIKFLVARTLK KELSGAKFNPSYERDTSEFVAENIPLTAPVCTPTDLKALCEKERFEAVILGSDQVFRPSY FADFADCFSLGFLPPNCTRIAYAASFGGDRLCGLKNPADLKAHAANLAKFKAISVRERDG VKLARECFGVDASWVLDPTLLANKEIYDKFLSHAPKRKGFAYILDPSPRSEAAIELLKKQ SGLEIDEVNDRGNRIGIKAWLSAIAGAEFVLTDSFHGCVFSIIFNKPFFVLVNASRGASR FSSLLDSFGLEDRALQDPKDARLDATIDWDGVNEALHRKREDSMKFLKISLGS >gi|257441067|gb|ACYG01000032.1| GENE 96 97346 - 98968 807 540 aa, chain - ## HITS:1 COG:SMb20252 KEGG:ns NR:ns ## COG: SMb20252 COG1035 # Protein_GI_number: 16263990 # Func_class: C Energy production and conversion # Function: Coenzyme F420-reducing hydrogenase, beta subunit # Organism: Sinorhizobium meliloti # 242 448 124 327 454 132 35.0 2e-30 MSFNVISEVVTKDRCIGCGVCASSCPFGVLKMRLGGNGFYAPEEGEGCRDKCDICLKVCP FYKKDTLENELNSKSYAELESFSPDFGRFLATYKFYKKDEAQRLSSASGGAGDYIFRELF ARGLIDYAICAVPADEGDFIAQNSKRDFSARENLVVAQNLQNSATKNSEQNSVIPNLTQN LADDDYINFTSVQNSFCENFTQNSAQNFTNENSAQKSKASCENSVSTQDFACENSKNARN YAGENFVPLFKFSVIKNAGELTRARSSAYYPLTLEAVLNEMSRREGRYAISALPCFAKAL RLAASKNPRLKSRISFIIGLVCGQGKGAGFTHKLADLAFKERKQLAAVNYRYKIAGKSAM SFGFKFRATDGSEAIDDRSSSAFAYWSSRAFTPLACNACTDVFAKCADVVLMDAWLQSEM SEWRGTSLVITRAAQIDALFSQPTKQAREAIFCERISAAEVHRSQKSQVECKNEIFYGAK NPLKRYILRQKLQIQRYSATHFDCDDFIAARLKKIAAANKVLALLALPKIAAYKIYRKFA >gi|257441067|gb|ACYG01000032.1| GENE 97 98965 - 100503 1320 512 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0962 NR:ns ## KEGG: CHAB381_0962 # Name: not_defined # Def: virulence factor MviN family protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 2 509 1 508 511 497 60.0 1e-139 MLKILNAPEAAQRKLGVVLSYVNIFVSTILTLVYTPFFLRALGQSEFGLYSLASSVIGYL AILDLGFGNAVTVYTAKYASSGEVERMHKLHGTIFSVYLVMSAVIVLAGAALLANLHAIF GAKLSTSEMGEIRIMLMLLTANLAISFPFSIYSSILTAHENFVFIKLIGIFRTIALPLAA VPALLLGYKAIAIVIIATAVNLICVAADFIYCKRKVSPVISVRNFDAPTLKQIFGYSFFI FLGIVVDQVNWNVDNFILGAVAGATAVSTYAVASTINATFVTLSLTISGVMLPKIAKMVS ANSTDSELSAEFIKIGRLQFYVIFFIASLLVIFGREFIVLWAGANYEISYAIALILVLPV SVPLIQNLGLAVLQAKNKVKFRSIAAFCVTLVNIAISIPLAKAYGGVGAACGTAFAITLL NICVMNIYYSRVIGLDIAKFWRNIGAMVVKFAPAIAVSLAINYALDLRGVSFLLICGGLY SAMFVLSAYFWAMNDYERAIFGGIAAKIRRRA >gi|257441067|gb|ACYG01000032.1| GENE 98 100585 - 101574 1316 329 aa, chain - ## HITS:1 COG:Cj1131c KEGG:ns NR:ns ## COG: Cj1131c COG1087 # Protein_GI_number: 15792456 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Campylobacter jejuni # 1 328 1 327 328 443 65.0 1e-124 MKILITGGAGYIGSHVAKALLEANRHDVVILDNLCKGSMRAIEALRKIGEFEFVQESLEN TPAIEKLFKREKFDAIIHFAAFIEVFESTQNPLKYYLNNTANAMNLIALANKYGVKDFIF SSTAATYGEPDIPQVSEDTPQNPINPYGRSKLMVEWVLKDAAAANPNFKYGILRYFNVAG AASDGTIGQNYPNATHLIKVATQTIVGKRDKMSIFGDDYDTKDGTCIRDYIHVEDLASAH LAVLDYLQTNDSAVFNVGYGTGFSVKEVVNEAKKVSGVDFKVQIAPRRAGDPACLISNAD KIRTKTSWQPEHESLDEIILSALNWEKKL >gi|257441067|gb|ACYG01000032.1| GENE 99 101627 - 102481 1022 284 aa, chain - ## HITS:1 COG:NMB2048 KEGG:ns NR:ns ## COG: NMB2048 COG1793 # Protein_GI_number: 15677870 # Func_class: L Replication, recombination and repair # Function: ATP-dependent DNA ligase # Organism: Neisseria meningitidis MC58 # 33 281 28 271 274 217 42.0 2e-56 MRSEIFKILKGAVLGALFLVCGAIADEAKFKPMLLKEYVPGMNITGWVVSEKLDGVRAIW DGKNLRSRRGKIINAPEGWSAGFPPFFVDGELYTARGEFEQLVSIVSSSVPDERWSRVKF YAFDLPKEQKNLSAKMEILRNFIASSGAQNLLIVQQTPVSTHADVQVYFDRVIASGGEGV VLRDPNALYESGRSDKILKYKKTHDSDCKVVKINPGYSKNEGKMGSLSCVDLRSGVKFKV GTGFSDEMRANPPKVGTIITYQYQNLTREKKPRFPVFLRVRPAI >gi|257441067|gb|ACYG01000032.1| GENE 100 102471 - 103835 1363 454 aa, chain - ## HITS:1 COG:Cj1132c KEGG:ns NR:ns ## COG: Cj1132c COG3298 # Protein_GI_number: 15792457 # Func_class: L Replication, recombination and repair # Function: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB # Organism: Campylobacter jejuni # 218 450 35 260 264 237 47.0 4e-62 MKKDYICVFDCETIPDVAALVRVLDEDAIADCFEPFDKKSFAKLLDAQLSQKIGGEKQNA SLNFAVNSAEQNFKIENSEQNSALQSFTQQDVALQSFASENSAENPTHGNFTSENSMSQN TAPKNSALLNLTYDDTSPQSSAAQGAAVENSTLRSSAPQNFAAESFASRSSASQSSKSEN LALNSAQDPASNALNFKIYGEQPIFNADKSKILNHKLLSLRAMEIFKEKTGSEFLPVCFH RVVSISAVMADGFGRFLRVSTLDGENERDKIAKFLAFIEDFNPRLVSFNGRGFDLPMIMA RAMCYDLSAAAYFETNDRDNNKSKWENYRSRYDGRFHLDLLDHISDFGAVRGLKLDHVCA SVGLPGKYDVHGDQVLQLYYSGEQAKIDEYCRSDVLNTYWLFLKYELLRGKITKDDYLNY IAVMGEFLQKECAGMSYTPVFCDFIERELAAYAK >gi|257441067|gb|ACYG01000032.1| GENE 101 104091 - 104435 208 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461457|ref|ZP_05626553.1| ## NR: gi|257461457|ref|ZP_05626553.1| hypothetical protein CAMGR0001_2024 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2024 [Campylobacter gracilis RM3268] # 1 114 1 114 114 216 100.0 4e-55 MTRTVYYEARHKAIAEGGVEGIATVLRGDDEVEKASLLFCLDYYLDPYYGCTLAHESEIF ALLQELLLTERSQAIRDDILQLLGDYCGDFSVLRSRICKASGELLPGIKRLIER >gi|257441067|gb|ACYG01000032.1| GENE 102 104457 - 105284 1123 275 aa, chain - ## HITS:1 COG:Cj1400c KEGG:ns NR:ns ## COG: Cj1400c COG0623 # Protein_GI_number: 15792718 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Campylobacter jejuni # 1 274 1 274 274 441 80.0 1e-123 MILKGKKGLIVGVANAKSIAYGIAEACHAQGAQMAFTYLNDALKKRVEPIAEEFGSKFVY ELDVNNQAHLDGLADRIKADLGEIDFVVHAVAYAPKEALEGEFVNTTKEAFDIAMGTSVY SLLSLTRAVLPVLKEGGSVLTLTYLGGPKFVPHYNVMGVAKAALESSVRYLAHDLGARGI RVNAISAGPIKTLAASGIGDFRMILRYNEINAPLKRNVTTQDVGKSAMYLLSDLASGVTG EVHYVDCGYNIMGMGDVATDTEGKTILAWDAAKAE >gi|257441067|gb|ACYG01000032.1| GENE 103 105578 - 106291 706 237 aa, chain - ## HITS:1 COG:Cj1401c KEGG:ns NR:ns ## COG: Cj1401c COG0149 # Protein_GI_number: 15792719 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Campylobacter jejuni # 1 227 1 222 223 236 52.0 2e-62 MILAANLKCNHTRASFERYAKALDEGLAGGISREDEILVFPPASAFCAKVKNFTQGAQNF YPAAHGSFTGEVGGDMLAEFDIKTVLIGHSERRAILGESAELIREKFGFAAARGWRIVFC IGEDEAAFAQDRSEEFVAAQLEGIDLKYPSLVLAYEPVWAIGTGRSAQCQQIERMLNFLR AKSSAPLLYGGSVNVANIGGIAGIASCAGVLVGTASWDASKFLELIRVVSHRYTSLP >gi|257441067|gb|ACYG01000032.1| GENE 104 106288 - 107499 1175 403 aa, chain - ## HITS:1 COG:Cj1402c KEGG:ns NR:ns ## COG: Cj1402c COG0126 # Protein_GI_number: 15792720 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Campylobacter jejuni # 1 399 1 397 400 568 72.0 1e-162 MGEILSIKDLKFKDGARVFIRCDFNVPMDEFCNITDDRRIRSSIPTIKYCLDEGCAVILA SHLGRPKNGYEERLSLKPVVKRLSRLLEREIKFVSDVAGEEAGAAVNSLKKGEVLLLDNL RFEKGESKNDEALAKRLASYAEFYINDAFGVCHRAHASVEAITKFYDEAHKAAGFLLLKE IKFAKDLIKDPARPFVAVTGGSKVSGKLQALKNLLPKVDKLIIGGGMAFTFLKAVGYDIG KSLLEEDLIEEAKNILRNARELGVKIYIPVDAVAAPQCSQDAVTKKVTVQEIPSDWMGLD IGPATVALFKEALDDAQTIWWNGPMGVFEIDKFARGSLHISHTIADSDATTVVGGGDTAD VVERAGNADDMTFISTGGGASLELIEGKELPGVRVLTAKTELR >gi|257441067|gb|ACYG01000032.1| GENE 105 107501 - 108505 1115 334 aa, chain - ## HITS:1 COG:Cj1403c KEGG:ns NR:ns ## COG: Cj1403c COG0057 # Protein_GI_number: 15792721 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Campylobacter jejuni # 1 332 1 331 332 427 63.0 1e-119 MAVKIAINGFGRIGRCAARIALSRDDVELVAINDTAKRELTRYLLQYDTVHGEFRKKVEI LSDECIAVDGKKIRVYSTREPAELDFAGDGAEAVLECTGAFLTSEKCKPFIDNGIGVVVM SAPAKDDTPTFVIGVNEGAYAGQRVISNASCTTNGLAPIAKILDDELGIEKGLMTTIHAY THGQSLVDVKAKDFRRSRAAALNIAPTTTGAAKAISKVLPQLSGKMHGQSVRVPVANVSM VDLTVLTRKQTSAEELNEIFRRYASKEMKGILLVDDDSRVSSDFCTSEYSSIVASDCTQV IDGNLIKVMSWYDNEWGYSERLIDLALYAAKRRK >gi|257441067|gb|ACYG01000032.1| GENE 106 108643 - 109020 481 125 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1000 NR:ns ## KEGG: CCV52592_1000 # Name: not_defined # Def: NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.-) # Organism: C.curvus # Pathway: not_defined # 1 107 1 107 115 71 42.0 1e-11 MRRIVLSSLAAIAILSGCNQPKADTAPQQKQESVAHTIVFLLGDTGDKRISLSSNDMFAT GVLTDEKGKKHNLKRAASASGIMLTNAEGIELLFKRGEGVYTPGKGKKDIPVTYTEHEHK SGEMM >gi|257441067|gb|ACYG01000032.1| GENE 107 109262 - 109705 461 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461464|ref|ZP_05626560.1| ## NR: gi|257461464|ref|ZP_05626560.1| hypothetical protein CAMGR0001_2032 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2032 [Campylobacter gracilis RM3268] # 1 147 1 147 147 278 100.0 6e-74 MDSIKFYLNDYEIEGESFTEVVVAINGEPLLELIKRREQSFAAKEGQASIAGGYAYLSLI DFEELFLRAALEADLAQDERDVVLLGCPCGIWDCWYLALKIKFETETVKLYEFKNLRRKD WQYGLEFKFDRVSFVSEISKIASFNKL >gi|257441067|gb|ACYG01000032.1| GENE 108 109807 - 110088 220 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461465|ref|ZP_05626561.1| ## NR: gi|257461465|ref|ZP_05626561.1| hypothetical protein CAMGR0001_2033 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2033 [Campylobacter gracilis RM3268] # 1 93 1 93 93 154 100.0 2e-36 MSLNFKTRSTAKIIIDGAKIRRKDQIFALFAVALDFKPEYVANLDALYDALGERGGRILV VIKRGGILKLRLGKFYDILLDVLRSGEAKILIL >gi|257441067|gb|ACYG01000032.1| GENE 109 110085 - 110816 442 243 aa, chain - ## HITS:1 COG:no KEGG:CA_C0843 NR:ns ## KEGG: CA_C0843 # Name: not_defined # Def: ribonuclease precursor (barnase), secreted # Organism: C.acetobutylicum # Pathway: not_defined # 145 241 57 154 156 129 61.0 1e-28 MAKKLIPLAIFAALLLALNFISNSRSPASKDERVFTSKTLDTASRKSGAQNSKSGTDRKI SSSQNPASGADAKDERGAGSADGGVDLGDLKSHPRENEPTVTNPKNEADAHRRRSADYEA SNSQNPAANSKNQLADEPCISRECVSAHIRRTGTLPQNFITKKQAGELGWQGGDLWRYAR GKSIGGDRFGNFERRLPDKKGRIWRECDIEYRGGPRGAKRLIFSNDGLIFYTADHYESFE RVQ >gi|257441067|gb|ACYG01000032.1| GENE 110 110819 - 111382 590 187 aa, chain - ## HITS:1 COG:Cj1210 KEGG:ns NR:ns ## COG: Cj1210 COG0586 # Protein_GI_number: 15792534 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Campylobacter jejuni # 1 185 1 185 185 145 43.0 4e-35 MESMFANLHTWGYLILFLYSLGGGFLALAAAGVLSSAGELNIVLCIVIACISNFIGDSGL FLVSRYNKKEIMPYLRKQRRNLALAQILFRKYGDRIILIKKFIYGLKTLVPIAIGITKYS FLKFSLINAVSSLIWALVVGLLSYYAGDFVRELYAHVKDAPWIAPLALGAIVAAIVLYFR FATRKRG >gi|257441067|gb|ACYG01000032.1| GENE 111 111864 - 112445 760 193 aa, chain - ## HITS:1 COG:XF0565 KEGG:ns NR:ns ## COG: XF0565 COG2930 # Protein_GI_number: 15837167 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 42 181 52 195 301 73 32.0 3e-13 MKKFIIALFLLFSAAFAEDELIIDSASAYSSVMRTNAQYKYLAQQARAIVIFPSVKKLGF IIGGMYGEGIIIYNNDGAHSVSGAEISSASVGLQIGYEDNYLVIFVMHDDVIQKMRNSQI TLSGDATAVAGNYSADSGAIDVLNQDMYVFTNKGGLFAGVSLGGSVLETKNDRAFDPNTE GYALLMRVIGADE >gi|257441067|gb|ACYG01000032.1| GENE 112 112456 - 114009 2058 517 aa, chain - ## HITS:1 COG:Cj1209 KEGG:ns NR:ns ## COG: Cj1209 COG1418 # Protein_GI_number: 15792533 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Campylobacter jejuni # 1 517 1 517 517 649 74.0 0 MIEILIALCALAVGAGIGYLVARKINNANYDFFVEQAKAKAKAIEFEAEGILRNSKISVQ EAEFEAKKKYEDKASKLQKEFNVKFDELGKKEHALLTEQEILKDSKKELESAKKEAKFLY EEGSNLKKSYEEKLAEALKVLERVAGFTQDEARAQVLKKVEEQSRTDIAHIVRKYEEEAK KEARKKANYILAQATSRFAGEFAAERLINVVNIKNDELKGRIIGKEGRNIKALEMTLGVD VIIDDTPNAIIVSSHNLYRRAIAVRVIETLIEDGRIQPARIEDIYKKVSDEFEASIAEEG ENIVMDLGLSKIHPEILKLIGKLKFRASYGQNALAHSLEVAHLAGIIAAETGGDQKLAKR AGLLHDIGKALTHEYEGSHVDLGAEVCRRYKEHPVVINAIYAHHGHEEATSVESAAVCAA DALSAARPGARREVLESYLKRVSDIEAIAMSKTGVKQAYAINAGREIRVIANAKLMNDDE AVLVAKEIASEIQDKVQFPGEIKVNVIRELRAVEIAK >gi|257441067|gb|ACYG01000032.1| GENE 113 113942 - 114559 430 205 aa, chain - ## HITS:1 COG:Cj1208 KEGG:ns NR:ns ## COG: Cj1208 COG0212 # Protein_GI_number: 15792532 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Campylobacter jejuni # 1 174 1 172 208 143 45.0 2e-34 MQKNEFRAICKSRLKSHTARAARCEHYALLWRLERLIKFLKARKILIFLPMSYEPNVLIL RKKLSKSCEFYVPFMVDISLKMVRLRQPFKISRFGLRQTLPQNGYFKKVDLAVVPAIGVD GAMARIGHGKGFYDMFFSGLKLKPAIAFVSIKDCFCSEILSLDHDVKGDFYITPSQNYLK RGKYDRDFNRLVRSCGGRWHRILSS >gi|257441067|gb|ACYG01000032.1| GENE 114 114640 - 115221 725 193 aa, chain + ## HITS:1 COG:Cj1207c KEGG:ns NR:ns ## COG: Cj1207c COG0526 # Protein_GI_number: 15792531 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Campylobacter jejuni # 1 191 1 182 185 118 30.0 7e-27 MKFRFFLALFTAVLFLTGCGDDEDKKSSDTPTEANTTQPQSETEAVIQVDYTAPFTLQLS NGKILNMQKTKQGFRIDNNSTVTLFAFFTPWCDACAVQVSALNAAKQAYSGKLDIIGVMI GDASLDDAKNYASAHEVNYAIAYGEGTDFFTKALGGINEVPYMAIYDEKGEFSAQYFGLM PEEILMTELEKIF >gi|257441067|gb|ACYG01000032.1| GENE 115 115221 - 116084 474 287 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157804145|ref|YP_001492694.1| 50S ribosomal protein L32 [Rickettsia canadensis str. McKiel] # 1 281 4 300 303 187 36 3e-46 MFEFFKKGLSKTIDAMRGAKSEDKISKEILEEMLLEADVGYELVEEILEKLPAKKLVAKD DLKGVLKNYFDYEIAKAADEKPFVELIIGVNGAGKTTTTAKLANLYKNSGQSVILGACDT FRAGAVEQLKKWAQILNLPIVATAQGHDPAAVAFDTVSSASAKNIDRVLIDTAGRLQNQK NLAAELEKIVRICDRAKSGAPHRKIIVLDATQGNHSVAQARAFNEIVRLDGIIITKLDGT PKGGALFAIARELRLPILFVGVGERMEDLAEFNSDQFVDTLADGIYA >gi|257441067|gb|ACYG01000032.1| GENE 116 116764 - 118095 1320 443 aa, chain - ## HITS:1 COG:CAC1610 KEGG:ns NR:ns ## COG: CAC1610 COG1114 # Protein_GI_number: 15894888 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Clostridium acetobutylicum # 4 438 3 436 440 305 41.0 9e-83 MKGKLSRSQFLTISLTLFAMFFGAGNFIFPPGLGRESGQNFYIAIMFFCATAVLLPVLGV AAIARAKGLQSLVRRIDPVFAIVFTALLYLTIGPLFAIPRAANMPFDIAIKPFIAEERLQ IWLFVYSAAYFALNYYICMNPSKLVDLLGKYLTPILLALILLLFGAGFLFPIGSFVAPSG EYVDHAAAKGFVEGYQTMDALASLAFGIIVINAIKATGVSDEKHLVTSTIKAGMMSGVIL MTIYFMLGYLGATSAELFKDTPNINGAELLSRVSDHYFGRVGVVILGSAFFLACLTTTLG LISSASEYFEELTKGKIKYKTWAIAWCVIGFGVANFGLTTIIKGSIPVLVAIYPISIMLI ILSLINPWIDSSKLIYRACVYVCVVEGVINGLDILGISAPLVTFIVKKMPFYDSMLGWIV PSTVTFAVAYVLHLIFEKRDDSF >gi|257441067|gb|ACYG01000032.1| GENE 117 118306 - 119655 1580 449 aa, chain + ## HITS:1 COG:Cj1205c KEGG:ns NR:ns ## COG: Cj1205c COG1066 # Protein_GI_number: 15792529 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Campylobacter jejuni # 1 449 1 446 446 632 70.0 0 MAKVKTTIFECQHCGNQQSRWLGRCPDCGAFDSFVELKPAQIKALKEIEGELARASSASA KAISEIQIEQISRIDTKDSELNLVLGGGVVEGSLVLIGGSPGIGKSTLLLKIAANLASGG RAVLYVSGEESASQIKMRAQRLGAISEQLFLLTEINLGAVLEEVERRDYKFIVIDSIQTL FSDKAPSAPGSITQVREITFELMRLAKARGISIFIIGHITKEGSIAGPRILEHMVDVVLY FEGDASKQLRILRGFKNRFGATSEVGIFEMGPHGLVSAKDVASKFFTRGKAVSGSAITIT MEGTRALVVEIQALVCESGYPKRSATGFDKNRLDMLLALLDRKLEIGLGGYDVFVNVSGG VKITETACDLAVVAAIVSSFKNRPISKESVFIGEVSLNGEIREIFNLDARLKEAAMQKFK NAIVPMKPQNAQGLKIFHATEIAQILDWM >gi|257441067|gb|ACYG01000032.1| GENE 118 120406 - 121149 895 247 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461483|ref|ZP_05626579.1| ## NR: gi|257461483|ref|ZP_05626579.1| putative membrane protein [Campylobacter gracilis RM3268] putative membrane protein [Campylobacter gracilis RM3268] # 1 247 1 247 247 387 100.0 1e-106 MSPNVIVKFVILFFIRAQSLNVKFSRLDAVVSRAYAKYGVLFKLSVPLLAVASVFALFNL YDFAKSNYALTIFLLALGSPLLTYSFFKAIKSAMTFALFVIPFAAVFAIIAVTGAQKLDN SLNFNIVFPLFFTIVWFAMSVIADEDVAQIMNKIVSKLSTLFVTIFILYNYEALHGILTA SSGGYRASEDELSALDLVFMTIRFFTLPSIFTLMIFEIKDYLFARYDAFVQAQQERMEDL KNSKGSE >gi|257441067|gb|ACYG01000032.1| GENE 119 121381 - 122187 929 268 aa, chain - ## HITS:1 COG:jhp1099 KEGG:ns NR:ns ## COG: jhp1099 COG0834 # Protein_GI_number: 15612164 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Helicobacter pylori J99 # 5 250 12 265 277 126 30.0 5e-29 MKKSLFLILLSCIFALANSLSQIKQSKVIRIAVYENEPPFSRVTDNGFEGFDVELANAIG GKILGDTGGRIELIPVSAQARFPSIQNNQADMLIAAASVTEERKKNYEFSMPYLSVNSGV LTRKSDNIQKMSDLRGKKVGVIRGSTGEAFMQKDGGYNLVYCKNSSDCYKRLKSGEIDGA CDDNLFVMVYPVADPSVEVNIKSLGENVFLGIAMQKGNADLAEAVNQALISLSKEGFFKK AYNDTFEPFYKGTVDKKYFLLDDIYSFF >gi|257441067|gb|ACYG01000032.1| GENE 120 122205 - 123011 1020 268 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 18 250 30 263 279 126 32.0 3e-29 MKKSFFLILLSAIFVFANSLSEIKQSKVIRVGVYENEPPFSKSSEKGFEGFEVELANALA GKIFGNSGGRIELIPVTNEVRFPMLQNNQADMIIAAASITEERKGSVDFSMPYFTVNLGI LTKKDSNIHKIGDLMGKKIGIIRKTTGEAYIKKDGGYNVSYCNDSVDCYRRLKSGEIDGY CNNNLFVMVYPIVDPAVEVNIKNLGDNVFLGVAVQKGNAELLEAINKGLIALSKEGFFKK AYEDTFESFYKGTVDKKYFLLDDLYSFF >gi|257441067|gb|ACYG01000032.1| GENE 121 123441 - 124247 915 268 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 1 250 1 263 279 165 36.0 8e-41 MKKIILGILLLFTSSVVANTLSEIRQSGSVRVGVFEAQPPFSKFEDGKFQGFEVTLAEAL SKDIFGGKAGKVEFVPVKASERLKVLEENKVDMVLATFTITNERKQLVDFTTPYFAVNIG VLTRAGDRIKTVSDLHGKPIIAETGTTGEAYFRKEGFEIINCATANECYKMLKDGKGIGY ATDNLIVLAYAVIDSDTEVNIKNLGVSDFLGIAVSKGNKDLLEFLNGELVKLSKNGFMKK TYDETIEPYYKGTAEKKYFLLDDLYSLF >gi|257441067|gb|ACYG01000032.1| GENE 122 124420 - 125115 894 231 aa, chain - ## HITS:1 COG:Cj0086c KEGG:ns NR:ns ## COG: Cj0086c COG0692 # Protein_GI_number: 15791474 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Campylobacter jejuni # 1 226 4 230 231 288 59.0 7e-78 MQINLDDVRIESGWKEALREEFLSEYFVKIKENLLAAKEREIVYPPGNLIFNAFNLTPFE RVRAVILGQDPYHGAHQAMGLSFSVPRGVRIPPSLVNIYKEIKSDLGISEPESGDLSYWA KQGVLLLNASLSVGANRANSHSGFGWQAFTDAVIKILSARRQSLVFMLWGNFAKAKSALI DAQKHLILTAAHPSPLAGGAFFGCKHFSRCNEYLRAHGLGEIDWDLNHGAG >gi|257441067|gb|ACYG01000032.1| GENE 123 125252 - 125470 194 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461488|ref|ZP_05626584.1| ## NR: gi|257461488|ref|ZP_05626584.1| hypothetical protein CAMGR0001_2056 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2056 [Campylobacter gracilis RM3268] # 1 72 1 72 72 103 100.0 4e-21 MKPAQILSLLSHISFVAAIIYRLKFRDNNPWEFAIALFAYAILFAFYPQSLLNDNKKTIA LLLFMALLIVIV >gi|257441067|gb|ACYG01000032.1| GENE 124 125637 - 126251 371 204 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461489|ref|ZP_05626585.1| ## NR: gi|257461489|ref|ZP_05626585.1| hypothetical protein CAMGR0001_2057 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2057 [Campylobacter gracilis RM3268] # 1 204 1 204 204 395 100.0 1e-109 MQAVKILKILWKVIKIAMLVIAILFFLLIAYIYLAIQISPLSKFPYVKDRDLAKFEALTN TKGETLLIYRKKAIPYHCRDKLQTCICYAHFIKADKPFILTQQKMLQEGYEFVSKSDCIA ETTNLHEFKLSWAMPSYHYAGSREYLIYGSIKNLNITAIVNDKRRIWYKKEHEWGQPIDY DHEVIFYPELNIVQINTLGYYSVR >gi|257441067|gb|ACYG01000032.1| GENE 125 126331 - 126927 709 198 aa, chain - ## HITS:1 COG:MT0058 KEGG:ns NR:ns ## COG: MT0058 COG0693 # Protein_GI_number: 15839429 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Mycobacterium tuberculosis CDC1551 # 4 187 3 182 212 92 36.0 6e-19 MKNLALVMFSGQTHLDFVGFYDCMLRLKAVHPQLEMRFCSRERQVSDSGGLTIDAGEITT DLGGFDAVFVPGGMATRRLKDDAGFISWLATARDAKYKFSVCTGSLLLGAAGFLRGRRAT THPLCYDLLAPYCADMVHERLVRESLPAGGEIITAGGVSSSIELGLCVIEKFAGVQAREA AAAAMDYPYYGLRSKLVR >gi|257441067|gb|ACYG01000032.1| GENE 126 127150 - 127896 664 248 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257461491|ref|ZP_05626587.1| ## NR: gi|257461491|ref|ZP_05626587.1| hypothetical protein CAMGR0001_2059 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2059 [Campylobacter gracilis RM3268] # 1 248 1 248 248 512 100.0 1e-144 MIKLTQMRAAFEKEEPNELYLSYLGWVKTLIPFWRQAVARIAELSGTADEKRDKHLRVID NSLELMPHWRFKKIKYVQARRKEIDSAISFIRNGALTQQACRYAFAPVCRNLASILRSFL YVSTFGYSDEQLPTVFAQKIYGIALCHTLFPFDTGDFVYYLPREKSIHTDDPADLDNWHL MMEIAGGDLGISALIERLNERAYEIWTNYKTPFEWKYDEGIWNLEFENVSKRLHYAGVRA FAGLSKAE >gi|257441067|gb|ACYG01000032.1| GENE 127 127932 - 128570 765 212 aa, chain - ## HITS:1 COG:Cj0026c KEGG:ns NR:ns ## COG: Cj0026c COG1351 # Protein_GI_number: 15791425 # Func_class: F Nucleotide transport and metabolism # Function: Predicted alternative thymidylate synthase # Organism: Campylobacter jejuni # 1 202 1 202 207 303 73.0 2e-82 MQVKLLNFTPLWVCSNAIRTCWQSFERGDCGGAKDLALIDRVGNQLKHSSTLEHLYYNFY ISGISRALLQELARHRLASLSVKSTRYTLKELRGEDSFAQGDFENAARYIVLTGNEAVDN ASVAALENLRVILQTPISLDIAKYCLPECYKSELSWSINARSLQNFLALRSSKAALWEIR ELASKIYDALPQEHKFIFQSCMASREKTQDEG >gi|257441067|gb|ACYG01000032.1| GENE 128 128697 - 129323 482 208 aa, chain - ## HITS:1 COG:Cj1066 KEGG:ns NR:ns ## COG: Cj1066 COG0778 # Protein_GI_number: 15792391 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Campylobacter jejuni # 1 199 1 198 201 123 34.0 3e-28 MKSIKEVMLSRHSCRKFCSDKLNSELVREILDLARLSPSSCGLEPWRMMIISDPCELKEL SVACNSQPQVAECSHAVILIARNDLRVGEAYLERTVRRRANTPQKYEAAMNYFRAKFAGL DDEALMNYATKQLYILAANIANIAEGFDVRSCIMTGFDAAALEKLCALEAKFRPAIVVAL GHGEPSKYPHTRYELDEILISRGGSEKR >gi|257441067|gb|ACYG01000032.1| GENE 129 129445 - 130794 1545 449 aa, chain + ## HITS:1 COG:Cj0935c KEGG:ns NR:ns ## COG: Cj0935c COG0733 # Protein_GI_number: 15792264 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Campylobacter jejuni # 1 441 1 439 444 422 60.0 1e-118 MNDKFSKIGFILAVAGSAVGLGNAWKFPTLVGTNGGSAFILLYLLLTLLVSFVIFLAEIV IGRLSESDPVRAFEKLAPSYKGAWKYAGFFMISALLIYAFYSVVMGWILKYVVSSALYLP KSIDESGAAFNALLGSDFLSAAICFTIASAFCFFIVSKGVKSGIERLNVWMMPALFILLV LMLIYAASFDGFGRSAKFLLVPDFSKLNKDSVLSALGLAFFTLSLGVTTIMTYAASLPAR TNILTSSINIVCINVLIGVMMGLIVFTFIFEFGGDPKAQGPGLVFVSLVVLFSKLGAIGN ILAFLFFTSLLFAAITSAISMLEPAIYYLVNSRKLSRKCASLLVFAVTYVLGICCILGYY GGTSEYFSLGGKSFFDVLDYLTSNILMPLSGIIVAIFVGFAIKKRAVEILLRPYMGRMGF KLWYFVLLRFVAPAAIVVIALNQLKILNF >gi|257441067|gb|ACYG01000032.1| GENE 130 131311 - 132654 1499 447 aa, chain + ## HITS:1 COG:Cj0935c KEGG:ns NR:ns ## COG: Cj0935c COG0733 # Protein_GI_number: 15792264 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Campylobacter jejuni # 1 438 1 438 444 370 52.0 1e-102 MNDKFSKIGFILAVAGGAVGLGNAWKFPTLVGQNGGSAFVLLYLALTLGVGFSIFLAEMA LGRLSGRDLPSAYETLAPRGGRKWRAAGVFIAGGMLVLSFYLVILGWVIRYIFLGFSPLP ATAEEAGAVFDDLISHSLATSLGFYALALVLTLSVVARGIKSGIERLNVVMMPLLFVLLL AMLAYACTMQGFGAAAKFLFYPDFGKITVNSVLSALGLALFTLCVGVGCIAAYAASLSEG VRLVRSSVNIVFINIAIGLMMGLIVFTFIFEFRTDPAQGAGLVFVSLTTMFAKMGLAGQV LEVAFFVSLFFAGITSAVSMIEPFVFYLIGRFKISRLRAVCISGCVIAVLGACSLLSMHA DYASRFKLFGASFFDCLDFVSSNVMLPLGALTSAIFVGFVMDAQRLRGLFGADMGELGFK IWYFSLRFVAPVAIVIIMANLLFFSGK >gi|257441067|gb|ACYG01000032.1| GENE 131 133138 - 133506 338 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|311697103|gb|ADP99975.1| ## NR: gi|311697103|gb|ADP99975.1| conserved hypothetical protein, secreted [marine bacterium HP15] # 12 122 6 116 117 69 37.0 6e-11 MKYLVSKSLFALAASFAVASVLSGCGFIKKPMTSEATLLDRAEMATGIDKSNLSVVPDSV KSEIDSVHYKVRSKNGDLYRCYFSSVIVVDSDVLCTKIVGAGGTGGSKSGNCNALLKKAG KC >gi|257441067|gb|ACYG01000032.1| GENE 132 134041 - 135387 1723 448 aa, chain - ## HITS:1 COG:Cj1156 KEGG:ns NR:ns ## COG: Cj1156 COG1158 # Protein_GI_number: 15792480 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Campylobacter jejuni # 21 447 5 431 432 723 85.0 0 MENTNQNSAQTAVSNSNQNGRKTYAKTHVPVEGYQIEELRSMDLENLIAIADELGVENPR EFRRQALVFEILRMQTKQGGFILFTGILEVTAEGYGFLRGIDSNLSDSANDAYVSLSQIR KFALRVGDIVTGQVREPKDQEKYYALLKIEAINYKSIQEARERPLFDNLTPLFPTEKLKL EYDPMRLTGRVLDLFTPIGKGQRGLITAPPRSGKTELMKELANGITRNHPEVELLVLLVD ERPEEVTDMERSVRGEVFSSTFDQPAFNHVRVAELVIEKAKRAVENGKDVVILLDSITRL ARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIETGSRMDDV IFEEFKGTGNSEIILDRNISDRRIYPAINITKSGTRKEELLQGSENLQKIWALRSAISTM DDVEALKFLYAKMLKTKDNTELLSIMNG >gi|257441067|gb|ACYG01000032.1| GENE 133 135449 - 136387 1007 312 aa, chain - ## HITS:1 COG:Cj0443 KEGG:ns NR:ns ## COG: Cj0443 COG0825 # Protein_GI_number: 15791810 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Campylobacter jejuni # 1 311 1 311 312 468 73.0 1e-132 MASYLDFEKSIKQIDEDITAAKIRGDEDAVEILNKNLEKEISKVYKNLNEYQRLQLARHP DRPYAIDYIRALLQDARELHGDRAFRDDPSIVCYLGIMGNRKIAVIAEQKGRGTKNKLKR NFGMPHPEGYRKALRVAKLAEKFNLPILFLIDTPGAYPGLGAEERGQSEAIARNLYEFSD IKTPTIAVVIGEGGSGGALAIGVADRLAMLQNSIFSVISPEGCAAILWNDPSKSEAATKA LKITAEELKELGLIDDVIKEPKTGAHRDKDGAIKALGNYVLTELHKLDDLSIDELISRRQ QKILRFGAYKEN >gi|257441067|gb|ACYG01000032.1| GENE 134 136387 - 137574 968 395 aa, chain - ## HITS:1 COG:Cj0442 KEGG:ns NR:ns ## COG: Cj0442 COG0304 # Protein_GI_number: 15791809 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Campylobacter jejuni # 1 395 11 404 404 557 69.0 1e-158 MITSLGLDKQSSFENICNGKTGVDKISLFDASEFPVQIAAEVKGFDPSSIIEDGKEIKKM DRFIQLGLKAAGEAIDDAKFSGFDSDEFGVSSASGIGGLPNIEINANTCLQRGPRRISPF FIPSALVNMLGGFVSIYYNLKGPNLSSVTACAASAHAIMDAARAIMIGEAKKMLAVGAEA AVCPVGIGGFAAMKALCARNDDPAHASRPFDAERNGFVMGEGAAALVLEELEDAKARGAK IYGELVGFGASGDAYHITSPSLDGPIRAMKKAYEMAGRPKIDYINAHGTSTAINDKNETA ALKELFGEGKVPAVSSTKGQLGHCLGAAGAVEAAISLLAMQNGIIPPTINQISKDPDCDL DYVPNVARKAKLDCVMSNNFGFGGTNASLIFKRVD >gi|257441067|gb|ACYG01000032.1| GENE 135 137623 - 137859 451 78 aa, chain - ## HITS:1 COG:DR1942 KEGG:ns NR:ns ## COG: DR1942 COG0236 # Protein_GI_number: 15806940 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Deinococcus radiodurans # 1 74 35 108 110 77 50.0 4e-15 MAVFEDVRDVVVEQLSVSPDQVKLDSKIIEDLGADSLDVVELVMALEEKFGIEIPDSESE KLVSIKDVVDYIENLPKK >gi|257441067|gb|ACYG01000032.1| GENE 136 137928 - 138671 216 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 247 4 242 242 87 29 3e-16 MKFSGKNVLITGASRGIGAQIARTLAGYGLKVWINYRSAPEPADALLEEIRANGGEGAVI KFDATNEAEFSEALSLIAQSDGELSYLVNNAGITNDKLALRMKLEDFMGVIEANLSSAFI GCREALKLMSKKRFGAVVNIASIVGEMGNAGQVNYSASKGGMIAMSKSFAKEGAARGIRF NCITPGFIATDMTDALSDDVKASYEASIPLKRLGSTSDVAEGVAFLLSDGAGYITGETLK INGGLYM >gi|257441067|gb|ACYG01000032.1| GENE 137 138774 - 140240 1630 488 aa, chain - ## HITS:1 COG:Cj0434 KEGG:ns NR:ns ## COG: Cj0434 COG0696 # Protein_GI_number: 15791801 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Campylobacter jejuni # 1 488 1 492 492 647 63.0 0 MGQKTILLITDGIGFNASDKFNAFANAKKPAYDYLFKNVPNTLLRTSGLAVGLPQGQMGN SEVGHMTIGSGRILYQNLVKIDRAIDEGSLEKNEALQSLLSKCRRVHVIGLYSDGGVHSH LRHFDAICEIAQNAGCETWAHAITDGRDVSPSSGAEFLKHLQAKFKVASVCGRFYAMDRD KRFDRVRRAYDVLMGETASLEISPSQYILQSYEHGVSDEFIEPASFNGFSGIGADDGVIF INFRNDRARELCAALGDESFSEFKRKLVVQNLITMSEYDASFKFPLLFEKPVLKNTLCEV IAEAGLTQLHTAETEKYAHVTFFFNGGVEEPLPNETRVLIPSPKVKTYDEQPQMSAPAVC DAVIRGIEAGIDFIVVNFANGDMVGHTGNYDAAIKAVEAVDECIGKILSAAKAHDYAYVQ ISDHGNCEAMRGDDGEILTNHTTFDVFCFVLGRGARELKSGLGLSNVAATVLKLMGLPKP TEMDEALF >gi|257441067|gb|ACYG01000032.1| GENE 138 140545 - 141504 973 319 aa, chain + ## HITS:1 COG:Cj0433c KEGG:ns NR:ns ## COG: Cj0433c COG0472 # Protein_GI_number: 15791800 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Campylobacter jejuni # 1 319 35 353 353 368 61.0 1e-101 MPRFIRWAQARHAAQPIYELAPQNHQKKSKTPTMGGLVFVTAAVLASLLCAKLNNVFVLC GLLCLVGFGYIGFKDDISKILGRQNHAGLSARAKFALQNFLAFLIGATLYAFSDLGGEFF VPFFKYPLLNLWIFAPLFWTIVISASSNAVNLTDGLDGLATIPSVFSLCSLGVFAYLCGH AIYSQYLLLPRVAGAGEVCIIVSALIGALLGFLWFNCYPAEVFMGDSGSLSVGAFLGYCA VITKNEILLIMIGFVFVIETLSVILQVGSFKIFKRRIFLMAPIHHHFELKGWVENKIIIR FWIIALIANIIALTSLKLR >gi|257441067|gb|ACYG01000032.1| GENE 139 141506 - 142030 595 174 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0565 NR:ns ## KEGG: CCC13826_0565 # Name: not_defined # Def: hypothetical protein # Organism: C.concisus # Pathway: not_defined # 1 172 1 171 171 204 65.0 9e-52 MRAQIEPDFETTRERYGEILKQILVYKAYCDDNGDPDGAKYRELEATLHKITGKDMSKFD LWEWWEADGAENLAFDIALPEPQLVPDITKDELREIVERMNTFEPREMGDAFLDAFYYRP NFAANGGYFTEFLKLNFKDTYDPRLFERCERSGEIAGLSADEITQISWGKRGEK >gi|257441067|gb|ACYG01000032.1| GENE 140 142027 - 143502 1399 491 aa, chain + ## HITS:1 COG:Cj0432c KEGG:ns NR:ns ## COG: Cj0432c COG0771 # Protein_GI_number: 15791799 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Campylobacter jejuni # 1 375 1 368 402 407 55.0 1e-113 MKKSLFGYGLTTKAIAERYRDEGGWDIYDDKFEISSGAPKLDEFGNALLNPSEFDPAASE LEIPSPGFPPHHELVRKARNLISEYDYFDDYEGLKIWISGTNGKTTTTKMMQHLLERYGS QMGGNVGVPLAKLDKSAKIWVLETSSFTLHYTKHARPDIYVLLAITPDHLSWHGDFAEYE RAKLSPLLAMREGSVALIPRAYESSAAAQNSLARVICYENEADLAQKFGIDLGEIKFRTP FLIDALLALCVEKILFDRCDAMRLNDFVIEGNKLEEFTDAHGRIWVNDTKATNIDACAQA LKRYAGRKIHLILGGDDKGVDLRPLFAEFKKYDLQIYAIGSNTDKIVLLCDEYKLPCVRC EILQTAVSEISKRYRDADFKKSGASELEVQNLSANSRCDGDKAKENAKIGENTLQEGGGS SAASDDAFSPKRRTNDGETRNSQNSKNFENFKNSINSASEIALLSPACASLDQFKSYAER GEEFKKAVLNL >gi|257441067|gb|ACYG01000032.1| GENE 141 143676 - 144833 1141 385 aa, chain - ## HITS:1 COG:jhp0681_1 KEGG:ns NR:ns ## COG: jhp0681_1 COG3596 # Protein_GI_number: 15611748 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Helicobacter pylori J99 # 40 232 45 246 257 88 31.0 3e-17 MEQNNSKAAQEGTAINLDIQELASKGKEIAGEISRDINQRLNVLIVGKTGVGKSTLINAI FGANVVKTGSGEPVSKEINEIKISDKFYIYDSKGLEMKDFEQTYADIENFLKENEQKSAQ EQINFVWYCICESGRRVEEGDIKLFELIKSSGYPIAAVITKAQQDKDENGEKFSDIVKER LGADTVFRVRALAIRDDEGYVKKIMGLEELVEATYAGLPEGIRRAFAREQRVSKKIKFEA ASGIVTKYSAMAAAIAVTPIPFSDIALLIPTQIAMITHITSIYGFNLDGKQIAELTVSFA AVAAGGFVARAAVGNFLKLIPAVGSVFGGAVSAAVASSTTKLMGNAYLAYLNDNFELIFK GDFDLIRNLTSGAIKEYFENTKTKE >gi|257441067|gb|ACYG01000032.1| GENE 142 145519 - 146007 456 162 aa, chain + ## HITS:1 COG:VC0847 KEGG:ns NR:ns ## COG: VC0847 COG0582 # Protein_GI_number: 15640863 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 1 160 1 160 422 110 36.0 1e-24 MARIVKPLSDKQIKEAKPKAKDYKLTDGDGLGLIVSKTGRKRWVFAFISPDTGKLNNTGL GNYPVLSLAEAREKRTELKKLVMRGIDPITEKKRARAQRISEHNRSFEKVFNEWLEFEAK SILPQTLKTKRGRIENHVMPILKDRGIKSITHGEIADILKET >gi|257441067|gb|ACYG01000032.1| GENE 143 146046 - 146762 234 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239524421|gb|EEQ64287.1| 30S ribosomal protein S15 [Helicobacter pullorum MIT 98-5489] # 1 236 162 388 391 94 26 2e-22 LNRVFLFAVSSGYAEVNIMANIDAKSLIPKTKVEHYAKLTERQDLKAFFNAIYDYPHFET IKNAMKLCLHLPLRAAPLSRLKWDYVDFDRRLLTIPRAEQKIKRSEIGDFKLPLSDEVMR ILQDQAKLSRAYEYVFINSHFTDHIHKDTATNAIKGFDFRDRQTGRVVTLHSLRGIFMTQ AFNNMQKHGVSKEAIKKALDHLHGDKVDLSYSEKADFLDELKILLDWWSSYILEIKDN >gi|257441067|gb|ACYG01000032.1| GENE 144 146771 - 147469 490 232 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461514|ref|ZP_05626610.1| ## NR: gi|257461514|ref|ZP_05626610.1| hypothetical protein CAMGR0001_2083 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2083 [Campylobacter gracilis RM3268] # 1 232 1 232 232 418 100.0 1e-115 MAKLSEPRDTQSAKDEREKRETEAIEQVLIDIRKRLRIADKANRNFDLLIAFNGMMNETI DESFCITHDPNLFPEFKILTHFYQSEEAKDEILTAFVDFFKNIMEAKAKKNDIIIRYENY LEAIELLNHAFYFSEYSTGEPYIRDPFGRNCDCDPYPEYERFMRAATEYFAPFKEQKERY DLLNNTQKIRDKFSDTLILKARMYQIVGVDKNKKATLANKIYKYFYPNDKDA >gi|257441067|gb|ACYG01000032.1| GENE 145 147677 - 147883 268 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461515|ref|ZP_05626611.1| ## NR: gi|257461515|ref|ZP_05626611.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 68 1 68 68 117 100.0 3e-25 MKKSEVKPKYLRAAQIASIYGIGLSTVWYFAKQGFLRPIKFSKNITFFNPAEVEAFFMRK AAQDEAAV >gi|257441067|gb|ACYG01000032.1| GENE 146 147867 - 148331 386 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461516|ref|ZP_05626612.1| ## NR: gi|257461516|ref|ZP_05626612.1| hypothetical protein CAMGR0001_2085 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2085 [Campylobacter gracilis RM3268] # 1 154 1 154 154 264 100.0 2e-69 MKPLFKNEAEKRRYLRFYAHLSAYPDIKAIYAQKQDSQLKEGVIKALGVAFDLFEERENE INRKAIADFASECKDLKDAPELYEKMLKACYPDIYLKYLQDERDGSKTADFKDVAFDLFL ALSAQREQMQELQSENERLALTFLTTEGASNGAK >gi|257441067|gb|ACYG01000032.1| GENE 147 148318 - 148554 307 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461517|ref|ZP_05626613.1| ## NR: gi|257461517|ref|ZP_05626613.1| hypothetical protein CAMGR0001_2086 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2086 [Campylobacter gracilis RM3268] # 1 78 1 78 78 145 100.0 8e-34 MGRSKLNFTPSAFCFSAGDKDMLKAFKRQLHIYKVQSLDGASQELLDCAYDLFHITRTQE ESIKALEVKAGIRKERER >gi|257441067|gb|ACYG01000032.1| GENE 148 148551 - 148817 298 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461518|ref|ZP_05626614.1| ## NR: gi|257461518|ref|ZP_05626614.1| putative beta-lactamase HcpC [Campylobacter gracilis RM3268] putative beta-lactamase HcpC [Campylobacter gracilis RM3268] # 1 88 1 88 88 153 100.0 4e-36 MKSINHKRTLLKIMLEQGRVTAGRVFGISNANQYLGELKREGAIKDRWTQEDGRRFKWWY IVDFDKAKKKIGNWGDKEAKANNTPRET >gi|257441067|gb|ACYG01000032.1| GENE 149 149039 - 149578 401 179 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0309 NR:ns ## KEGG: CCC13826_0309 # Name: not_defined # Def: aspartate carbamoyltransferase (aspartatetranscarbamylase; ATCase) (EC:2.1.3.2) # Organism: C.concisus # Pathway: not_defined # 2 173 60 232 252 154 52.0 1e-36 MQDTKEIKIAGRYEFRGLKIINIYELEDLSIFYATTKSLNSCDKKAIIEFYGLRQYHKPA PPLDLIAELLDAINNVSSIDLCYDSHTPFNLDAFKIIKYGSTAYVKAEFGTLQRIYFYDK ALKNDLSFSLYRAEATAPIIDLNKPALLPKTERLELQLHQAVSDFKDILKLATSSPNNR >gi|257441067|gb|ACYG01000032.1| GENE 150 150231 - 150458 335 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461522|ref|ZP_05626618.1| ## NR: gi|257461522|ref|ZP_05626618.1| hypothetical protein CAMGR0001_2091 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2091 [Campylobacter gracilis RM3268] # 1 75 1 75 75 130 100.0 3e-29 MQIALNIKNANPALFKALSAFLKTQPNLDYELTEKTINGYSPKYEAEVLKDLDEIEPKTF DSVKAFRKAIDNGEI >gi|257441067|gb|ACYG01000032.1| GENE 151 151028 - 151231 243 67 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_1465 NR:ns ## KEGG: CHAB381_1465 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 66 1 66 78 73 57.0 4e-12 MDKKAFNELLKRANLSKKEFAELVGVLPSSVNNWGGSQNVPYWVESWLINYIKAGNFEKI KELTKDI >gi|257441067|gb|ACYG01000032.1| GENE 152 151377 - 151637 320 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461524|ref|ZP_05626620.1| ## NR: gi|257461524|ref|ZP_05626620.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 86 1 86 86 124 100.0 2e-27 MQHNHSVRQGFSQFLATYESTQDCAYDLFAKLTELSNAYDALEAKADEAAQSLARIERIA HIYESGALEQEALYRAIKQSTNQQGA >gi|257441067|gb|ACYG01000032.1| GENE 153 151639 - 152085 576 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461525|ref|ZP_05626621.1| ## NR: gi|257461525|ref|ZP_05626621.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 148 1 148 148 253 100.0 2e-66 MILTGTDRPIIKSFHELLKQTAGSDEVSEQVLYDVGYSLFYQRNHIQNENKRVLKGNGVL HRRTAEAEEQNAELKEAHEYFLRILGEDRIKIQTLLADKIILEDRNKKLSKLYNELHLKW CETCDELYEVQQERDALKNKLSERASNE >gi|257441067|gb|ACYG01000032.1| GENE 154 152078 - 152452 382 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461526|ref|ZP_05626622.1| ## NR: gi|257461526|ref|ZP_05626622.1| hypothetical protein CAMGR0001_2096 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2096 [Campylobacter gracilis RM3268] # 1 124 1 124 124 209 100.0 4e-53 MNKRDFNIALKYLAKGADAPSYEQLKDFAFRLWTSLHKRELERAADDKQRAKFKTEIAKR AQDMDEAQATFEVGLQAYRIFNYYASECEKLEERISYLYEQAGALQDEAEPRGSYKWHTP LKGA >gi|257441067|gb|ACYG01000032.1| GENE 155 152538 - 152729 181 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461528|ref|ZP_05626624.1| ## NR: gi|257461528|ref|ZP_05626624.1| conserved hypothetical protein [Campylobacter gracilis RM3268] conserved hypothetical protein [Campylobacter gracilis RM3268] # 1 63 1 63 63 104 100.0 2e-21 MELLTPKQVGEILNLSRSTLSKMRSDKYKGRFNIVLPFIKIGRAVRYEREAVNQAIKELK ASK >gi|257441067|gb|ACYG01000032.1| GENE 156 152726 - 153175 366 149 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_0303 NR:ns ## KEGG: CCC13826_0303 # Name: not_defined # Def: co-chaperone protein GrpE # Organism: C.concisus # Pathway: not_defined # 2 126 3 128 168 79 41.0 5e-14 MKISPEIRARILAKHKAGTTQRELQKLFNLSAGAVNKITKGITKNLKSTIAKGTEYLTEL SDLNEYEREAVTQAVSDNARAITFFKQTAIKNQIMANRLLNEASDLSDIELHSRITARNK ETMLGKNYELQEQGSTSAITQIVIRRDDI >gi|257441067|gb|ACYG01000032.1| GENE 157 153238 - 153504 197 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461530|ref|ZP_05626626.1| ## NR: gi|257461530|ref|ZP_05626626.1| hypothetical protein CAMGR0001_2099 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2099 [Campylobacter gracilis RM3268] # 1 88 23 110 110 142 100.0 1e-32 MAHAVAYALNLDAKVIYKDFTFGRYKEEYLKALQEAKDNPQKAYLNLLIKFKDKSPIFDR DDFANAEAYSVFNRSYDKKRTQAGSDDA >gi|257441067|gb|ACYG01000032.1| GENE 158 153623 - 153871 414 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257461531|ref|ZP_05626627.1| ## NR: gi|257461531|ref|ZP_05626627.1| hypothetical protein CAMGR0001_2100 [Campylobacter gracilis RM3268] hypothetical protein CAMGR0001_2100 [Campylobacter gracilis RM3268] # 13 82 1 70 70 103 100.0 3e-21 MQTLTIRTDETIMRQLVAIGKILASSANASFETLTTELTDEYVKELNARADEALKGKGLI DEATARDTIERIKAGKYARKIS >gi|257441067|gb|ACYG01000032.1| GENE 159 153852 - 154130 264 92 aa, chain + ## HITS:1 COG:no KEGG:CFF8240_1705 NR:ns ## KEGG: CFF8240_1705 # Name: not_defined # Def: plasmid stabilization system protein # Organism: C.fetus # Pathway: not_defined # 3 91 2 90 91 89 53.0 6e-17 MRVKFHSRFFDELDAIKDFIAKDSPNRADSFVDEVFRKCLDLKNMPLAHRLSQKVKKDNA RDLILKGYVIPYLIESETIYVLGIYGANEWQE Prediction of potential genes in microbial genomes Time: Wed Jun 29 08:11:42 2011 Seq name: gi|257441065|gb|ACYG01000033.1| Campylobacter gracilis RM3268 contig00004, whole genome shotgun sequence Length of sequence - 1465 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1465 959 ## CCC13826_2335 putative transcriptional activator Predicted protein(s) >gi|257441065|gb|ACYG01000033.1| GENE 1 1 - 1465 959 488 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_2335 NR:ns ## KEGG: CCC13826_2335 # Name: not_defined # Def: putative transcriptional activator # Organism: C.concisus # Pathway: not_defined # 12 488 1380 1780 2350 267 43.0 1e-69 AALISQGAAASSSWVTWGFSVGASAELSGTTSKDSSKSSSSVASNLSGNNIKILTDSNKD TAINIKGSNLYASNDIYLNTHNLFMEASQDSYEAKQSSKTISGRVSATMYGGGGGSAGLD YSKSNMKEESLSHNNAKVYAGHNIYALASNDALIKGANLRADNALALKVGHDLSLASLRD SYNYDSKSSSIGAGIGISGSKTTSDPDNPSDISNNIVRYSNSKLSSINANYSRSKSSTMV KQTVLSSITAKELNIEVGANTDLKGSLIAAGYYDESGNFIDNGKLRLKTNTLTFSNLSNT RYDKSNSLSIGANYAFKDPQQGGEGGSKDGGSQAKESTAGSNAFSSNHMSGMQTSGIIGQ SGTSLQDKKNDTDPKSKISSINYANNRNLSYSMSKSLATIGKGELIVGDKDISSLSKDEL ASLQSDPNNKALYNSDDLTRLNRDSSKLNKELYSTKLNSDVDASVDMRLFSEGGRNEIKD ELNRGSAI