Prediction of potential genes in microbial genomes Time: Fri Jul 1 05:57:49 2011 Seq name: gi|224461045|gb|GG657759.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_0, whole genome shotgun sequence Length of sequence - 2898417 bp Number of predicted genes - 2755, with homology - 2677 Number of transcription units - 1054, operones - 612 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 773 - 832 10.3 2 2 Tu 1 . + CDS 959 - 2353 1575 ## gi|225567829|ref|ZP_03776854.1| hypothetical protein CLOHYLEM_03902 + Term 2383 - 2424 8.3 + Prom 2440 - 2499 5.7 3 3 Tu 1 . + CDS 2543 - 3262 582 ## COG3279 Response regulator of the LytR/AlgR family + Term 3299 - 3367 3.8 4 4 Op 1 2/0.096 - CDS 3389 - 4489 1090 ## COG3535 Uncharacterized conserved protein 5 4 Op 2 . - CDS 4508 - 5794 1267 ## COG1457 Purine-cytosine permease and related proteins 6 4 Op 3 . - CDS 5828 - 7270 327 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 - Prom 7324 - 7383 11.9 + Prom 7349 - 7408 5.5 7 5 Tu 1 . + CDS 7510 - 8277 635 ## ELI_3461 transcriptional regulator + Term 8278 - 8336 22.6 - Term 8266 - 8324 22.6 8 6 Tu 1 . - CDS 8353 - 9549 1228 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 9744 - 9803 6.0 + Prom 9662 - 9721 6.6 9 7 Tu 1 . + CDS 9775 - 10431 936 ## COG4684 Predicted membrane protein + Term 10491 - 10532 6.3 + Prom 10564 - 10623 3.8 10 8 Tu 1 . + CDS 10655 - 13192 2507 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Term 13226 - 13265 4.4 + Prom 13195 - 13254 2.3 11 9 Op 1 15/0.000 + CDS 13297 - 14106 930 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 12 9 Op 2 11/0.004 + CDS 14103 - 14573 508 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 13 9 Op 3 . + CDS 14564 - 16834 2643 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs + Term 16837 - 16898 13.8 - Term 16823 - 16885 14.0 14 10 Tu 1 . - CDS 16929 - 17579 547 ## Closa_3092 hypothetical protein - Prom 17610 - 17669 4.8 + Prom 17623 - 17682 5.3 15 11 Op 1 . + CDS 17745 - 18647 865 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 16 11 Op 2 . + CDS 18640 - 19134 658 ## EUBREC_2155 hypothetical protein 17 11 Op 3 . + CDS 19149 - 19595 561 ## COG1490 D-Tyr-tRNAtyr deacylase + Term 19604 - 19649 14.1 + Prom 19696 - 19755 7.7 18 12 Op 1 4/0.036 + CDS 19802 - 20305 635 ## COG1846 Transcriptional regulators 19 12 Op 2 35/0.000 + CDS 20327 - 22684 2624 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 20 12 Op 3 . + CDS 22686 - 24533 206 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 24547 - 24605 24.5 + Prom 24587 - 24646 6.8 21 13 Op 1 . + CDS 24672 - 25478 588 ## COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II 22 13 Op 2 . + CDS 25525 - 26115 622 ## COG1896 Predicted hydrolases of HD superfamily + Term 26139 - 26172 4.1 - Term 26119 - 26165 8.2 23 14 Op 1 . - CDS 26185 - 26445 279 ## CPE0254 hypothetical protein 24 14 Op 2 . - CDS 26458 - 26640 215 ## Dhaf_0015 hypothetical protein 25 14 Op 3 . - CDS 26699 - 27421 382 ## COG2071 Predicted glutamine amidotransferases - Prom 27501 - 27560 7.5 + Prom 27440 - 27499 6.0 26 15 Tu 1 . + CDS 27553 - 28530 1110 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog + Term 28553 - 28588 8.1 - Term 28636 - 28676 8.3 27 16 Tu 1 . - CDS 28686 - 28892 166 ## gi|225567855|ref|ZP_03776880.1| hypothetical protein CLOHYLEM_03928 - Prom 28942 - 29001 10.0 + Prom 28859 - 28918 8.4 28 17 Op 1 . + CDS 29061 - 29258 265 ## Sbal223_2624 hypothetical protein 29 17 Op 2 . + CDS 29267 - 30163 554 ## gi|225567857|ref|ZP_03776882.1| hypothetical protein CLOHYLEM_03930 30 17 Op 3 . + CDS 30172 - 30648 538 ## gi|225567858|ref|ZP_03776883.1| hypothetical protein CLOHYLEM_03931 31 17 Op 4 . + CDS 30651 - 30914 208 ## gi|225567859|ref|ZP_03776884.1| hypothetical protein CLOHYLEM_03932 + Term 30958 - 30998 6.2 - Term 30946 - 30984 6.2 32 18 Tu 1 . - CDS 30994 - 32214 1533 ## COG0137 Argininosuccinate synthase + Prom 32395 - 32454 9.9 33 19 Tu 1 . + CDS 32521 - 32628 64 ## + Term 32701 - 32765 19.7 + Prom 32683 - 32742 4.7 34 20 Op 1 22/0.000 + CDS 32781 - 33773 1112 ## COG0263 Glutamate 5-kinase 35 20 Op 2 . + CDS 33748 - 34995 1355 ## COG0014 Gamma-glutamyl phosphate reductase + Term 35123 - 35164 1.0 + Prom 34999 - 35058 7.6 36 21 Op 1 1/0.168 + CDS 35240 - 36280 1237 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 37 21 Op 2 . + CDS 36301 - 36747 491 ## COG0456 Acetyltransferases 38 21 Op 3 10/0.008 + CDS 36767 - 37990 1755 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 39 21 Op 4 13/0.004 + CDS 38014 - 38913 1190 ## COG0548 Acetylglutamate kinase 40 21 Op 5 . + CDS 38919 - 40097 1391 ## COG4992 Ornithine/acetylornithine aminotransferase 41 21 Op 6 . + CDS 40152 - 40583 621 ## COG3238 Uncharacterized protein conserved in bacteria 42 21 Op 7 1/0.168 + CDS 40649 - 41278 544 ## COG1555 DNA uptake protein and related DNA-binding proteins 43 21 Op 8 40/0.000 + CDS 41302 - 41991 1005 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 41994 - 42053 1.9 44 21 Op 9 . + CDS 42080 - 43414 1412 ## COG0642 Signal transduction histidine kinase 45 21 Op 10 . + CDS 43431 - 44357 826 ## Closa_0837 Lipoprotein LpqB, GerMN domain protein 46 21 Op 11 . + CDS 44390 - 46618 1712 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 47 21 Op 12 . + CDS 46694 - 47707 1252 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 48 21 Op 13 . + CDS 47714 - 48694 907 ## COG1466 DNA polymerase III, delta subunit + Term 48706 - 48750 6.2 49 22 Op 1 4/0.036 + CDS 48785 - 50599 2257 ## COG0481 Membrane GTPase LepA 50 22 Op 2 . + CDS 50600 - 51703 1047 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 51 23 Op 1 7/0.008 - CDS 51704 - 52258 643 ## COG2059 Chromate transport protein ChrA 52 23 Op 2 . - CDS 52255 - 52788 544 ## COG2059 Chromate transport protein ChrA 53 23 Op 3 . - CDS 52818 - 53330 601 ## Closa_2357 hypothetical protein 54 23 Op 4 . - CDS 53333 - 54256 860 ## COG1242 Predicted Fe-S oxidoreductase - Prom 54396 - 54455 6.1 + Prom 54340 - 54399 7.7 55 24 Tu 1 . + CDS 54488 - 55195 763 ## COG1158 Transcription termination factor + Prom 55197 - 55256 80.3 56 25 Op 1 10/0.008 + CDS 55393 - 58269 3336 ## COG1196 Chromosome segregation ATPases 57 25 Op 2 . + CDS 58296 - 59255 791 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 58 25 Op 3 . + CDS 59282 - 60496 1498 ## COG1171 Threonine dehydratase 59 25 Op 4 . + CDS 60515 - 60979 579 ## COG4728 Uncharacterized protein conserved in bacteria + Prom 60981 - 61040 8.5 60 26 Op 1 . + CDS 61099 - 61524 470 ## Closa_2944 hypothetical protein 61 26 Op 2 16/0.000 + CDS 61607 - 64273 2372 ## COG2205 Osmosensitive K+ channel histidine kinase 62 26 Op 3 . + CDS 64270 - 64980 825 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 65054 - 65093 0.2 + Prom 65065 - 65124 9.6 63 27 Op 1 . + CDS 65181 - 66572 1281 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 64 27 Op 2 . + CDS 66596 - 67249 668 ## COG1802 Transcriptional regulators 65 27 Op 3 . + CDS 67273 - 68472 1249 ## COG0538 Isocitrate dehydrogenases + Prom 68505 - 68564 5.1 66 28 Tu 1 . + CDS 68634 - 69326 693 ## BP951000_2096 hypothetical protein + Term 69348 - 69388 12.9 - Term 69334 - 69378 16.2 67 29 Op 1 . - CDS 69381 - 70241 413 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 70261 - 70320 4.6 - Term 70324 - 70369 13.5 68 29 Op 2 . - CDS 70395 - 72314 1977 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 72382 - 72441 7.3 69 30 Tu 1 . + CDS 72468 - 73118 656 ## COG2344 AT-rich DNA-binding protein + Term 73132 - 73188 7.2 70 31 Op 1 1/0.168 + CDS 73240 - 74739 685 ## PROTEIN SUPPORTED gi|225093729|ref|YP_002662469.1| ribosomal protein S15 71 31 Op 2 . + CDS 74740 - 75906 1311 ## COG0787 Alanine racemase + Prom 75915 - 75974 2.3 72 32 Op 1 . + CDS 75994 - 76341 318 ## COG2337 Growth inhibitor 73 32 Op 2 . + CDS 76366 - 77166 949 ## COG1253 Hemolysins and related proteins containing CBS domains 74 32 Op 3 . + CDS 77223 - 77876 886 ## COG0217 Uncharacterized conserved protein + Prom 77878 - 77937 80.3 75 33 Op 1 . + CDS 78086 - 78850 896 ## Hbal_0324 hypothetical protein 76 33 Op 2 . + CDS 78861 - 80141 1346 ## COG2873 O-acetylhomoserine sulfhydrylase 77 33 Op 3 1/0.168 + CDS 80194 - 80892 890 ## COG0740 Protease subunit of ATP-dependent Clp proteases 78 33 Op 4 . + CDS 80958 - 83339 2620 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 79 33 Op 5 1/0.168 + CDS 83375 - 85045 1788 ## COG2759 Formyltetrahydrofolate synthetase 80 33 Op 6 . + CDS 85059 - 85898 826 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 81 33 Op 7 . + CDS 85914 - 87203 1109 ## EUBREC_1956 hypothetical protein + Term 87222 - 87296 19.4 + Prom 87270 - 87329 7.1 82 34 Tu 1 . + CDS 87402 - 88583 1317 ## COG1454 Alcohol dehydrogenase, class IV + Term 88590 - 88644 8.2 + Prom 88640 - 88699 8.4 83 35 Op 1 5/0.024 + CDS 88725 - 89612 874 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 84 35 Op 2 . + CDS 89612 - 91000 1550 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 91014 - 91057 7.0 + Prom 91005 - 91064 5.1 85 36 Op 1 . + CDS 91130 - 91927 947 ## COG0428 Predicted divalent heavy-metal cations transporter 86 36 Op 2 . + CDS 91985 - 92464 633 ## COG1576 Uncharacterized conserved protein 87 37 Tu 1 . - CDS 92436 - 93437 711 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 93513 - 93572 6.2 + Prom 93610 - 93669 4.8 88 38 Op 1 . + CDS 93729 - 96110 2108 ## bpr_I0747 ABC transporter permease 89 38 Op 2 . + CDS 96123 - 96893 222 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 90 38 Op 3 40/0.000 + CDS 96901 - 97578 744 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 91 38 Op 4 . + CDS 97565 - 98839 1111 ## COG0642 Signal transduction histidine kinase + Prom 98870 - 98929 7.6 92 39 Tu 1 . + CDS 98960 - 99793 763 ## COG2340 Uncharacterized protein with SCP/PR1 domains - Term 99804 - 99848 13.4 93 40 Tu 1 . - CDS 99916 - 100482 550 ## COG1633 Uncharacterized conserved protein - Prom 100553 - 100612 4.8 + Prom 100435 - 100494 6.9 94 41 Op 1 . + CDS 100654 - 102093 1485 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 95 41 Op 2 . + CDS 102151 - 103203 1105 ## EF1030 endonuclease/exonuclease/phosphatase family protein + Term 103206 - 103261 9.1 + Prom 103261 - 103320 4.8 96 42 Op 1 . + CDS 103342 - 103887 596 ## Cphy_0280 hypothetical protein 97 42 Op 2 . + CDS 103924 - 104757 838 ## Cphy_0279 hypothetical protein 98 42 Op 3 . + CDS 104851 - 105156 368 ## Cphy_2613 hypothetical protein 99 42 Op 4 . + CDS 105171 - 106484 1035 ## Closa_2070 sporulation protein YqfD 100 42 Op 5 17/0.000 + CDS 106459 - 107448 1278 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 101 42 Op 6 . + CDS 107454 - 107948 349 ## COG0319 Predicted metal-dependent hydrolase 102 42 Op 7 . + CDS 107963 - 109633 1819 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 103 42 Op 8 . + CDS 109704 - 110087 450 ## gi|225567936|ref|ZP_03776961.1| hypothetical protein CLOHYLEM_04009 + Prom 110089 - 110148 4.4 104 43 Op 1 . + CDS 110169 - 110390 253 ## Cphy_2602 hypothetical protein 105 43 Op 2 . + CDS 110368 - 110913 593 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 106 43 Op 3 . + CDS 110935 - 111117 299 ## Bacsa_1905 hypothetical protein 107 43 Op 4 . + CDS 111092 - 112525 635 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 108 43 Op 5 . + CDS 112603 - 113019 480 ## Clole_2737 hypothetical protein 109 43 Op 6 6/0.016 + CDS 113099 - 115744 3538 ## COG0249 Mismatch repair ATPase (MutS family) 110 43 Op 7 12/0.004 + CDS 115746 - 117833 1727 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 111 43 Op 8 . + CDS 117836 - 118807 1059 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 112 43 Op 9 . + CDS 118771 - 119082 378 ## gi|225567945|ref|ZP_03776970.1| hypothetical protein CLOHYLEM_04018 113 43 Op 10 . + CDS 119084 - 120367 1363 ## COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance 114 43 Op 11 . + CDS 120390 - 121619 860 ## COG2081 Predicted flavoproteins + Prom 121621 - 121680 1.9 115 43 Op 12 . + CDS 121705 - 123354 1298 ## COG2509 Uncharacterized FAD-dependent dehydrogenases + Prom 123357 - 123416 2.2 116 44 Op 1 . + CDS 123436 - 123696 404 ## Closa_2047 hypothetical protein 117 44 Op 2 4/0.036 + CDS 123770 - 124426 636 ## COG2003 DNA repair proteins 118 44 Op 3 22/0.000 + CDS 124443 - 125465 1178 ## COG1077 Actin-like ATPase involved in cell morphogenesis 119 44 Op 4 . + CDS 125467 - 126348 1217 ## COG1792 Cell shape-determining protein 120 44 Op 5 . + CDS 126351 - 126869 512 ## EUBREC_1743 hypothetical protein 121 44 Op 6 1/0.168 + CDS 126862 - 129792 3515 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 122 44 Op 7 22/0.000 + CDS 129811 - 130401 446 ## COG0850 Septum formation inhibitor 123 44 Op 8 . + CDS 130383 - 131174 860 ## COG2894 Septum formation inhibitor-activating ATPase 124 44 Op 9 . + CDS 131187 - 131399 166 ## gi|225567957|ref|ZP_03776982.1| hypothetical protein CLOHYLEM_04030 125 44 Op 10 . + CDS 131396 - 132520 1355 ## COG0772 Bacterial cell division membrane protein 126 44 Op 11 . + CDS 132533 - 132928 547 ## COG1803 Methylglyoxal synthase 127 44 Op 12 . + CDS 132954 - 133889 1017 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 133895 - 133936 4.0 - Term 133881 - 133924 5.0 128 45 Tu 1 . - CDS 133929 - 134141 276 ## COG2155 Uncharacterized conserved protein - Prom 134188 - 134247 9.1 + Prom 134119 - 134178 3.8 129 46 Op 1 . + CDS 134224 - 135180 878 ## COG1242 Predicted Fe-S oxidoreductase 130 46 Op 2 . + CDS 135197 - 136573 1606 ## EUBREC_1735 hypothetical protein 131 46 Op 3 14/0.000 + CDS 136591 - 137286 694 ## COG0325 Predicted enzyme with a TIM-barrel fold 132 46 Op 4 . + CDS 137310 - 137858 637 ## COG1799 Uncharacterized protein conserved in bacteria 133 46 Op 5 . + CDS 137867 - 138622 304 ## PROTEIN SUPPORTED gi|227874237|ref|ZP_03992436.1| possible ribosomal protein S4e 134 46 Op 6 15/0.000 + CDS 138657 - 139169 444 ## COG0597 Lipoprotein signal peptidase 135 46 Op 7 . + CDS 139141 - 140055 308 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Term 140057 - 140094 -0.9 136 46 Op 8 . + CDS 140136 - 140783 768 ## EUBELI_01147 cytidylate kinase + Term 140814 - 140858 8.1 - Term 140800 - 140845 12.1 137 47 Tu 1 . - CDS 140850 - 141587 721 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 141641 - 141700 3.9 + Prom 141598 - 141657 6.6 138 48 Op 1 40/0.000 + CDS 141771 - 142472 730 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 139 48 Op 2 2/0.096 + CDS 142465 - 143466 808 ## COG0642 Signal transduction histidine kinase + Prom 143469 - 143528 3.9 140 49 Op 1 36/0.000 + CDS 143559 - 145757 1608 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 141 49 Op 2 . + CDS 145769 - 146440 322 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 146490 - 146545 8.6 + Prom 146556 - 146615 8.0 142 50 Op 1 . + CDS 146641 - 147414 525 ## COG0778 Nitroreductase 143 50 Op 2 . + CDS 147432 - 147776 295 ## COG0640 Predicted transcriptional regulators 144 50 Op 3 . + CDS 147800 - 148552 499 ## COG1145 Ferredoxin + Term 148574 - 148617 4.4 + Prom 148687 - 148746 6.0 145 51 Op 1 . + CDS 148771 - 150492 1820 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 146 51 Op 2 3/0.052 + CDS 150545 - 151876 1266 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 147 51 Op 3 10/0.008 + CDS 151866 - 152675 186 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 152808 - 152852 0.2 + Prom 152797 - 152856 2.7 148 51 Op 4 . + CDS 152911 - 153660 824 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 153715 - 153776 12.3 - Term 153719 - 153747 1.4 149 52 Tu 1 . - CDS 153801 - 154712 862 ## COG0583 Transcriptional regulator + Prom 154775 - 154834 7.5 150 53 Op 1 5/0.024 + CDS 154998 - 157598 2408 ## COG2200 FOG: EAL domain 151 53 Op 2 . + CDS 157595 - 161179 3102 ## COG0642 Signal transduction histidine kinase 152 53 Op 3 . + CDS 161184 - 161549 500 ## ELI_3416 hypothetical protein 153 53 Op 4 . + CDS 161576 - 162973 1208 ## COG0534 Na+-driven multidrug efflux pump 154 54 Tu 1 . - CDS 162979 - 164037 1002 ## COG0582 Integrase - Prom 164198 - 164257 7.9 155 55 Tu 1 . - CDS 164382 - 164741 357 ## Closa_2009 Peptidoglycan-binding lysin domain protein - Prom 164789 - 164848 8.7 + Prom 164844 - 164903 8.7 156 56 Tu 1 . + CDS 164942 - 165559 669 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 165592 - 165645 10.2 - Term 165443 - 165490 5.0 157 57 Op 1 . - CDS 165653 - 166756 889 ## CD1890 hypothetical protein 158 57 Op 2 . - CDS 166734 - 167630 951 ## COG1131 ABC-type multidrug transport system, ATPase component 159 57 Op 3 . - CDS 167615 - 168403 401 ## gi|225567996|ref|ZP_03777021.1| hypothetical protein CLOHYLEM_04069 160 57 Op 4 . - CDS 168400 - 168603 112 ## Amet_2000 ECF subfamily RNA polymerase sigma-24 factor - Prom 168702 - 168761 80.4 - Term 169049 - 169082 2.3 161 58 Op 1 6/0.016 - CDS 169096 - 169449 470 ## COG0799 Uncharacterized homolog of plant Iojap protein 162 58 Op 2 9/0.008 - CDS 169455 - 170042 568 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 163 58 Op 3 7/0.008 - CDS 170044 - 170655 516 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 164 58 Op 4 1/0.168 - CDS 170697 - 170987 223 ## PROTEIN SUPPORTED gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 165 58 Op 5 14/0.000 - CDS 171006 - 172292 1632 ## COG0536 Predicted GTPase - Prom 172344 - 172403 5.7 - Term 172422 - 172460 10.2 166 59 Op 1 . - CDS 172473 - 172757 446 ## PROTEIN SUPPORTED gi|240144150|ref|ZP_04742751.1| 50S ribosomal protein L27 167 59 Op 2 . - CDS 172762 - 173094 282 ## EUBREC_1694 hypothetical protein 168 59 Op 3 . - CDS 173109 - 173417 418 ## PROTEIN SUPPORTED gi|160880683|ref|YP_001559651.1| ribosomal protein L21 - Prom 173500 - 173559 8.7 169 60 Op 1 . - CDS 173573 - 176260 2262 ## COG1061 DNA or RNA helicases of superfamily II 170 60 Op 2 . - CDS 176300 - 177184 950 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 171 60 Op 3 24/0.000 - CDS 177220 - 178263 955 ## COG0208 Ribonucleotide reductase, beta subunit 172 60 Op 4 . - CDS 178291 - 180516 2035 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 180552 - 180611 6.4 + Prom 180630 - 180689 4.8 173 61 Tu 1 . + CDS 180717 - 181727 935 ## COG2502 Asparagine synthetase A + Term 181740 - 181802 18.1 - Term 181872 - 181905 0.4 174 62 Op 1 . - CDS 182137 - 183036 878 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 175 62 Op 2 . - CDS 183062 - 183853 1042 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 176 62 Op 3 . - CDS 183912 - 184328 513 ## COG0517 FOG: CBS domain 177 62 Op 4 1/0.168 - CDS 184350 - 185069 699 ## COG0527 Aspartokinases - Prom 185158 - 185217 80.3 - Term 185119 - 185185 30.0 178 63 Op 1 . - CDS 185219 - 185770 532 ## COG0527 Aspartokinases 179 63 Op 2 . - CDS 185832 - 186437 496 ## COG1011 Predicted hydrolase (HAD superfamily) 180 63 Op 3 . - CDS 186475 - 186957 484 ## COG2606 Uncharacterized conserved protein - Term 186989 - 187013 -1.0 181 63 Op 4 . - CDS 187042 - 187959 264 ## COG1533 DNA repair photolyase - Prom 188033 - 188092 6.5 + Prom 187992 - 188051 6.4 182 64 Tu 1 . + CDS 188086 - 188829 147 ## COG1943 Transposase and inactivated derivatives + Term 188832 - 188879 17.3 - Term 188812 - 188874 28.5 183 65 Op 1 1/0.168 - CDS 188881 - 189588 728 ## COG5011 Uncharacterized protein conserved in bacteria 184 65 Op 2 . - CDS 189563 - 191437 1592 ## COG1032 Fe-S oxidoreductase - Prom 191489 - 191548 5.1 185 66 Op 1 . - CDS 191559 - 192272 292 ## MGAS2096_Spy1117 hypothetical protein 186 66 Op 2 . - CDS 192338 - 192991 331 ## ELI_2369 hypothetical protein 187 66 Op 3 . - CDS 192997 - 193173 160 ## gi|225568028|ref|ZP_03777053.1| hypothetical protein CLOHYLEM_04101 188 66 Op 4 . - CDS 193219 - 193650 391 ## COG0346 Lactoylglutathione lyase and related lyases 189 66 Op 5 . - CDS 193674 - 194258 245 ## ELI_1484 hypothetical cytosolic protein 190 66 Op 6 . - CDS 194289 - 194906 541 ## COG0693 Putative intracellular protease/amidase 191 66 Op 7 . - CDS 194938 - 195360 277 ## COG3871 Uncharacterized stress protein (general stress protein 26) 192 66 Op 8 . - CDS 195324 - 195404 73 ## - Term 195429 - 195470 7.6 193 66 Op 9 . - CDS 195477 - 195965 166 ## Clole_4115 hypothetical protein - Prom 196111 - 196170 5.7 194 67 Tu 1 . - CDS 196177 - 198429 1758 ## COG0178 Excinuclease ATPase subunit - Prom 198486 - 198545 6.6 + Prom 198577 - 198636 5.2 195 68 Tu 1 . + CDS 198670 - 199533 387 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 199565 - 199604 4.4 - Term 199549 - 199596 9.6 196 69 Tu 1 . - CDS 199644 - 200012 120 ## DSY4315 hypothetical protein - Prom 200148 - 200207 6.2 197 70 Op 1 . - CDS 200264 - 203278 2722 ## COG0642 Signal transduction histidine kinase 198 70 Op 2 . - CDS 203372 - 204670 1643 ## COG1301 Na+/H+-dicarboxylate symporters 199 70 Op 3 . - CDS 204671 - 205531 1080 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 205644 - 205703 7.1 - Term 205592 - 205638 9.0 200 71 Op 1 . - CDS 205715 - 206017 192 ## gi|225568041|ref|ZP_03777066.1| hypothetical protein CLOHYLEM_04114 201 71 Op 2 . - CDS 206109 - 207392 1574 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 202 71 Op 3 6/0.016 - CDS 207408 - 207995 485 ## COG0131 Imidazoleglycerol-phosphate dehydratase 203 71 Op 4 18/0.000 - CDS 208009 - 209304 1413 ## COG0141 Histidinol dehydrogenase 204 71 Op 5 11/0.004 - CDS 209339 - 209980 697 ## COG0040 ATP phosphoribosyltransferase 205 71 Op 6 . - CDS 209985 - 211250 1353 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis 206 71 Op 7 . - CDS 211326 - 211874 608 ## COG3331 Penicillin-binding protein-related factor A, putative recombinase 207 71 Op 8 . - CDS 211823 - 212848 699 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 208 71 Op 9 . - CDS 212887 - 213462 710 ## EUBELI_01028 hypothetical protein 209 71 Op 10 . - CDS 213481 - 214248 677 ## COG0300 Short-chain dehydrogenases of various substrate specificities 210 71 Op 11 . - CDS 214260 - 216170 1642 ## COG1032 Fe-S oxidoreductase 211 71 Op 12 1/0.168 - CDS 216167 - 216853 693 ## COG0637 Predicted phosphatase/phosphohexomutase 212 71 Op 13 . - CDS 216807 - 217577 649 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 213 71 Op 14 . - CDS 217562 - 218944 1098 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Prom 218964 - 219023 2.7 214 71 Op 15 . - CDS 219026 - 219739 640 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 219759 - 219818 6.8 - Term 219759 - 219810 9.5 215 72 Tu 1 . - CDS 219831 - 220409 640 ## CLOST_0692 hypothetical protein - Prom 220601 - 220660 8.6 + Prom 220385 - 220444 5.7 216 73 Tu 1 . + CDS 220617 - 221132 353 ## COG5418 Predicted secreted protein + Term 221185 - 221231 2.1 - Term 221050 - 221087 3.1 217 74 Tu 1 . - CDS 221167 - 222615 1355 ## COG2195 Di- and tripeptidases - Prom 222653 - 222712 9.0 + Prom 222606 - 222665 6.7 218 75 Tu 1 . + CDS 222738 - 223670 547 ## COG3314 Uncharacterized protein conserved in bacteria - Term 223598 - 223634 4.0 219 76 Op 1 . - CDS 223659 - 224291 1068 ## EUBREC_1679 hypothetical protein 220 76 Op 2 14/0.000 - CDS 224295 - 224783 439 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 221 76 Op 3 . - CDS 224777 - 225346 613 ## COG0742 N6-adenine-specific methylase - Prom 225379 - 225438 6.9 - Term 225494 - 225540 8.5 222 77 Op 1 . - CDS 225566 - 225772 351 ## Closa_1963 small acid-soluble spore protein alpha/beta type - Prom 225799 - 225858 3.5 223 77 Op 2 4/0.036 - CDS 225872 - 227902 2325 ## COG1200 RecG-like helicase - Prom 227922 - 227981 2.1 - Term 227926 - 227974 -1.0 224 78 Op 1 9/0.008 - CDS 227987 - 229657 2251 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 225 78 Op 2 . - CDS 229677 - 230036 481 ## COG1302 Uncharacterized protein conserved in bacteria - Prom 230086 - 230145 10.6 - Term 230110 - 230158 4.6 226 79 Tu 1 . - CDS 230166 - 230354 234 ## PROTEIN SUPPORTED gi|160881022|ref|YP_001559990.1| ribosomal protein L28 - Prom 230403 - 230462 6.4 227 80 Op 1 . - CDS 230466 - 231707 996 ## EUBREC_1016 hypothetical protein 228 80 Op 2 . - CDS 231710 - 231979 186 ## gi|225568068|ref|ZP_03777093.1| hypothetical protein CLOHYLEM_04141 229 81 Op 1 . - CDS 232120 - 232530 399 ## gi|225568069|ref|ZP_03777094.1| hypothetical protein CLOHYLEM_04142 230 81 Op 2 . - CDS 232622 - 232765 177 ## 231 81 Op 3 . - CDS 232826 - 233233 577 ## EUBELI_00954 hypothetical protein 232 81 Op 4 . - CDS 233256 - 234218 607 ## EUBELI_00953 hypothetical protein 233 81 Op 5 . - CDS 234220 - 234543 459 ## EUBELI_00952 hypothetical protein 234 81 Op 6 19/0.000 - CDS 234578 - 236113 1700 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 235 81 Op 7 . - CDS 235950 - 236690 403 ## COG0772 Bacterial cell division membrane protein - Prom 236805 - 236864 80.3 236 82 Op 1 . - CDS 236866 - 237498 894 ## Closa_2234 cell cycle protein 237 82 Op 2 . - CDS 237507 - 239660 1793 ## COG0826 Collagenase and related proteases - Prom 239761 - 239820 1.6 - Term 239797 - 239824 0.1 238 83 Op 1 . - CDS 239825 - 240238 554 ## bpr_I1647 cell division protein ZapA 239 83 Op 2 29/0.000 - CDS 240305 - 241312 1295 ## COG2255 Holliday junction resolvasome, helicase subunit 240 83 Op 3 . - CDS 241327 - 241944 730 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 241 83 Op 4 3/0.052 - CDS 241953 - 242444 703 ## COG4769 Predicted membrane protein 242 83 Op 5 . - CDS 242457 - 242822 493 ## COG5341 Uncharacterized protein conserved in bacteria - Prom 242996 - 243055 11.9 + Prom 242936 - 242995 6.5 243 84 Tu 1 . + CDS 243024 - 244007 1126 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 244 85 Tu 1 . - CDS 244109 - 244633 584 ## BBR47_44420 hypothetical protein - Prom 244657 - 244716 6.8 - Term 244684 - 244743 5.1 245 86 Op 1 12/0.004 - CDS 244763 - 245554 894 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 246 86 Op 2 3/0.052 - CDS 245567 - 246157 840 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 247 86 Op 3 13/0.004 - CDS 246174 - 246902 789 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 248 86 Op 4 12/0.004 - CDS 246917 - 247501 828 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 249 86 Op 5 12/0.004 - CDS 247501 - 248448 954 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 250 86 Op 6 . - CDS 248479 - 249798 1489 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC - Prom 249826 - 249885 4.0 - Term 249908 - 249953 10.0 251 87 Op 1 4/0.036 - CDS 249979 - 251109 1143 ## PROTEIN SUPPORTED gi|227872165|ref|ZP_03990534.1| possible ribosomal protein S1 252 87 Op 2 2/0.096 - CDS 251090 - 251947 558 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 253 87 Op 3 1/0.168 - CDS 251965 - 252621 265 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 254 87 Op 4 1/0.168 - CDS 252657 - 253886 1056 ## COG2081 Predicted flavoproteins 255 87 Op 5 . - CDS 253889 - 254812 1144 ## COG1737 Transcriptional regulators 256 87 Op 6 . - CDS 254779 - 254847 100 ## - Prom 254871 - 254930 3.2 - Term 254877 - 254930 12.3 257 88 Op 1 4/0.036 - CDS 254948 - 256363 1663 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase 258 88 Op 2 9/0.008 - CDS 256402 - 257553 1376 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 259 88 Op 3 . - CDS 257603 - 257980 450 ## COG0511 Biotin carboxyl carrier protein 260 88 Op 4 . - CDS 258009 - 258764 750 ## EUBELI_00921 hypothetical protein 261 88 Op 5 . - CDS 258809 - 260248 1472 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - Prom 260329 - 260388 7.3 262 89 Op 1 36/0.000 - CDS 260411 - 261172 916 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 263 89 Op 2 36/0.000 - CDS 261173 - 263707 1920 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 263748 - 263807 2.9 264 89 Op 3 . - CDS 263865 - 264596 312 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 265 89 Op 4 . - CDS 264599 - 267250 1791 ## CLM_3579 putative ABC transporter permease - Prom 267342 - 267401 2.7 + Prom 267198 - 267257 3.1 266 90 Tu 1 . + CDS 267322 - 268059 702 ## COG1228 Imidazolonepropionase and related amidohydrolases + Term 268199 - 268233 1.1 - Term 268182 - 268228 2.2 267 91 Tu 1 . - CDS 268288 - 268437 67 ## - Term 268569 - 268609 9.2 268 92 Tu 1 . - CDS 268790 - 270778 1925 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 270923 - 270982 5.6 - Term 270907 - 270945 4.4 269 93 Tu 1 . - CDS 270992 - 272521 1770 ## COG0591 Na+/proline symporter - Prom 272599 - 272658 4.9 - Term 272642 - 272696 20.3 270 94 Op 1 . - CDS 272745 - 273221 676 ## COG1803 Methylglyoxal synthase 271 94 Op 2 . - CDS 273247 - 274815 1579 ## CLM_3549 ABC transporter permease 272 94 Op 3 1/0.168 - CDS 274815 - 275510 224 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Prom 275562 - 275621 5.3 273 95 Op 1 . - CDS 275639 - 276439 745 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 274 95 Op 2 . - CDS 276440 - 277321 1159 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 275 95 Op 3 . - CDS 277372 - 278043 935 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 276 95 Op 4 . - CDS 278093 - 280123 1872 ## COG0550 Topoisomerase IA 277 95 Op 5 . - CDS 280151 - 282256 2152 ## COG0855 Polyphosphate kinase - Prom 282383 - 282442 6.0 - Term 282449 - 282493 11.0 278 96 Op 1 . - CDS 282497 - 283582 1251 ## COG0136 Aspartate-semialdehyde dehydrogenase 279 96 Op 2 . - CDS 283633 - 285015 1797 ## COG0165 Argininosuccinate lyase 280 96 Op 3 . - CDS 285092 - 285700 607 ## COG1636 Uncharacterized protein conserved in bacteria 281 96 Op 4 40/0.000 - CDS 285761 - 286885 975 ## COG0642 Signal transduction histidine kinase 282 96 Op 5 . - CDS 286888 - 287535 613 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 283 96 Op 6 . - CDS 287558 - 288169 564 ## gi|225568125|ref|ZP_03777150.1| hypothetical protein CLOHYLEM_04198 + Prom 288213 - 288272 2.9 284 97 Op 1 24/0.000 + CDS 288319 - 289086 223 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 285 97 Op 2 . + CDS 289079 - 289876 809 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Prom 290001 - 290060 6.9 286 98 Tu 1 . + CDS 290086 - 290457 324 ## COG1321 Mn-dependent transcriptional regulator 287 99 Tu 1 . - CDS 290454 - 292199 896 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 292264 - 292323 4.9 288 100 Op 1 . - CDS 292391 - 294004 1518 ## COG1283 Na+/phosphate symporter 289 100 Op 2 1/0.168 - CDS 294019 - 296190 1973 ## COG0342 Preprotein translocase subunit SecD - Term 296694 - 296732 2.4 290 101 Op 1 1/0.168 - CDS 296744 - 298483 1677 ## COG1001 Adenine deaminase 291 101 Op 2 . - CDS 298499 - 299803 1572 ## COG2252 Permeases - Prom 299911 - 299970 5.8 + Prom 299729 - 299788 6.6 292 102 Tu 1 . + CDS 299893 - 300870 901 ## COG0583 Transcriptional regulator 293 103 Op 1 . - CDS 300887 - 302434 1408 ## COG1070 Sugar (pentulose and hexulose) kinases 294 103 Op 2 . - CDS 302456 - 304195 1910 ## COG0277 FAD/FMN-containing dehydrogenases 295 103 Op 3 4/0.036 - CDS 304209 - 304571 401 ## COG3862 Uncharacterized protein with conserved CXXC pairs 296 103 Op 4 6/0.016 - CDS 304568 - 305836 1166 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 297 103 Op 5 . - CDS 305820 - 307568 1508 ## COG0579 Predicted dehydrogenase - Prom 307731 - 307790 5.5 + Prom 307659 - 307718 7.6 298 104 Op 1 . + CDS 307743 - 308306 644 ## Cphy_3395 TetR family transcriptional regulator 299 104 Op 2 . + CDS 308303 - 309286 741 ## Psta_0599 amidohydrolase + Term 309517 - 309562 -0.9 - Term 309186 - 309230 -1.0 300 105 Tu 1 . - CDS 309287 - 309835 751 ## COG0386 Glutathione peroxidase 301 106 Op 1 . - CDS 309895 - 310329 403 ## COG2258 Uncharacterized protein conserved in bacteria 302 106 Op 2 6/0.016 - CDS 310331 - 311227 1088 ## COG2896 Molybdenum cofactor biosynthesis enzyme 303 106 Op 3 . - CDS 311311 - 311835 488 ## COG0521 Molybdopterin biosynthesis enzymes 304 106 Op 4 . - CDS 311910 - 312242 369 ## gi|225568149|ref|ZP_03777174.1| hypothetical protein CLOHYLEM_04222 - Prom 312273 - 312332 7.5 + Prom 312253 - 312312 6.3 305 107 Tu 1 . + CDS 312400 - 313431 1190 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 313441 - 313474 3.6 - Term 313309 - 313345 4.7 306 108 Op 1 . - CDS 313428 - 314348 752 ## Tter_1839 integrase family protein - Prom 314390 - 314449 4.6 307 108 Op 2 . - CDS 314453 - 315364 917 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF - Prom 315523 - 315582 77.3 + TRNA 315506 - 315578 84.4 # Thr CGT 0 0 - Term 315573 - 315630 13.2 308 109 Op 1 . - CDS 315647 - 316375 666 ## Closa_2690 GCN5-related N-acetyltransferase 309 109 Op 2 . - CDS 316434 - 317309 1150 ## COG0668 Small-conductance mechanosensitive channel 310 109 Op 3 . - CDS 317330 - 318163 537 ## COG1496 Uncharacterized conserved protein 311 109 Op 4 1/0.168 - CDS 318173 - 318523 301 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 312 109 Op 5 4/0.036 - CDS 318555 - 319214 756 ## COG0164 Ribonuclease HII 313 109 Op 6 2/0.096 - CDS 319207 - 319764 792 ## COG0681 Signal peptidase I 314 109 Op 7 2/0.096 - CDS 319805 - 320653 826 ## COG1161 Predicted GTPases 315 109 Op 8 . - CDS 320664 - 321152 592 ## COG0681 Signal peptidase I 316 109 Op 9 . - CDS 321251 - 321322 68 ## 317 109 Op 10 . - CDS 321383 - 321436 83 ## PROTEIN SUPPORTED gi|240146493|ref|ZP_04745094.1| LSU ribosomal protein L19P - Prom 321480 - 321539 80.3 318 110 Tu 1 . - CDS 321543 - 321752 269 ## PROTEIN SUPPORTED gi|238916980|ref|YP_002930497.1| large subunit ribosomal protein L19 - Prom 321814 - 321873 1.5 319 111 Op 1 . - CDS 321876 - 322655 951 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 320 111 Op 2 30/0.000 - CDS 322684 - 323436 849 ## COG0336 tRNA-(guanine-N1)-methyltransferase 321 111 Op 3 12/0.004 - CDS 323436 - 323942 576 ## COG0806 RimM protein, required for 16S rRNA processing - Term 323982 - 324029 2.2 322 112 Op 1 19/0.000 - CDS 324035 - 324265 335 ## COG1837 Predicted RNA-binding protein (contains KH domain) 323 112 Op 2 23/0.000 - CDS 324289 - 324534 352 ## PROTEIN SUPPORTED gi|160880540|ref|YP_001559508.1| ribosomal protein S16 324 112 Op 3 8/0.008 - CDS 324575 - 325921 1506 ## COG0541 Signal recognition particle GTPase 325 112 Op 4 . - CDS 325923 - 326267 506 ## COG2739 Uncharacterized protein conserved in bacteria - Term 326290 - 326333 8.5 326 113 Op 1 . - CDS 326337 - 327734 769 ## gi|225568169|ref|ZP_03777194.1| hypothetical protein CLOHYLEM_04243 - Prom 327766 - 327825 7.3 327 113 Op 2 . - CDS 327827 - 328738 1099 ## COG1404 Subtilisin-like serine proteases - Prom 328828 - 328887 5.9 + Prom 328763 - 328822 5.6 328 114 Op 1 . + CDS 328854 - 329492 563 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 329 114 Op 2 . + CDS 329567 - 329836 235 ## + Term 329859 - 329904 7.1 - Term 329852 - 329886 1.3 330 115 Op 1 22/0.000 - CDS 329893 - 330744 1242 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 331 115 Op 2 32/0.000 - CDS 330762 - 331421 958 ## COG2011 ABC-type metal ion transport system, permease component 332 115 Op 3 . - CDS 331408 - 332445 1070 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 332478 - 332537 5.6 - Term 332512 - 332562 8.2 333 116 Op 1 . - CDS 332584 - 333495 1084 ## COG0583 Transcriptional regulator - Prom 333522 - 333581 4.8 334 116 Op 2 . - CDS 333583 - 333726 225 ## gi|225568178|ref|ZP_03777203.1| hypothetical protein CLOHYLEM_04252 - Prom 333795 - 333854 7.1 335 117 Op 1 . + CDS 333854 - 334363 430 ## gi|225568177|ref|ZP_03777202.1| hypothetical protein CLOHYLEM_04251 336 117 Op 2 . + CDS 334360 - 334860 219 ## gi|167758960|ref|ZP_02431087.1| hypothetical protein CLOSCI_01306 + Term 335086 - 335135 -0.5 - Term 334629 - 334673 8.4 337 118 Op 1 . - CDS 334678 - 335154 526 ## COG1607 Acyl-CoA hydrolase 338 118 Op 2 . - CDS 335151 - 335642 461 ## CPF_1774 hypothetical protein - Prom 335687 - 335746 9.2 + Prom 335666 - 335725 10.4 339 119 Tu 1 . + CDS 335822 - 336559 730 ## COG0101 Pseudouridylate synthase + Term 336584 - 336644 9.9 - Term 336571 - 336630 13.5 340 120 Op 1 . - CDS 336703 - 337143 538 ## COG4154 Fucose dissimilation pathway protein FucU 341 120 Op 2 . - CDS 337137 - 337520 194 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase 342 120 Op 3 6/0.016 - CDS 337533 - 338420 1157 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - Prom 338442 - 338501 3.6 - Term 338443 - 338493 12.5 343 121 Op 1 16/0.000 - CDS 338526 - 339638 1192 ## COG1879 ABC-type sugar transport system, periplasmic component 344 121 Op 2 11/0.004 - CDS 339709 - 340716 1235 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 345 121 Op 3 21/0.000 - CDS 340709 - 341722 1359 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 346 121 Op 4 . - CDS 341725 - 343236 185 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Prom 343375 - 343434 12.5 347 122 Op 1 5/0.024 + CDS 343592 - 344533 900 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 348 122 Op 2 1/0.168 + CDS 344555 - 346117 1292 ## COG1070 Sugar (pentulose and hexulose) kinases 349 122 Op 3 . + CDS 346147 - 346485 450 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 346494 - 346539 11.2 - Term 346367 - 346422 -0.5 350 123 Op 1 10/0.008 - CDS 346535 - 347170 969 ## COG2376 Dihydroxyacetone kinase 351 123 Op 2 . - CDS 347176 - 348177 1273 ## COG2376 Dihydroxyacetone kinase 352 123 Op 3 . - CDS 348202 - 348591 462 ## Ccel_1035 glyoxalase/bleomycin resistance protein/dioxygenase - Term 348614 - 348661 10.4 353 123 Op 4 . - CDS 348670 - 349662 1094 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 349719 - 349778 6.3 354 124 Tu 1 . - CDS 349821 - 350474 876 ## COG1802 Transcriptional regulators - Prom 350660 - 350719 3.5 + Prom 350590 - 350649 8.4 355 125 Op 1 5/0.024 + CDS 350688 - 351581 1024 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 356 125 Op 2 . + CDS 351611 - 353023 1019 ## COG3395 Uncharacterized protein conserved in bacteria + Term 353041 - 353108 13.1 357 126 Op 1 . - CDS 353097 - 354083 1008 ## COG1896 Predicted hydrolases of HD superfamily 358 126 Op 2 . - CDS 354089 - 354493 499 ## COG0432 Uncharacterized conserved protein 359 126 Op 3 . - CDS 354510 - 355367 888 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 360 126 Op 4 . - CDS 355387 - 356655 1296 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 361 126 Op 5 . - CDS 356668 - 357498 955 ## COG0005 Purine nucleoside phosphorylase 362 126 Op 6 . - CDS 357514 - 358587 1253 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family - Prom 358765 - 358824 3.3 + Prom 358631 - 358690 4.0 363 127 Tu 1 . + CDS 358793 - 360427 1983 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 360429 - 360491 29.0 + Prom 360516 - 360575 7.8 364 128 Op 1 . + CDS 360623 - 361201 433 ## SpiBuddy_2171 hypothetical protein 365 128 Op 2 . + CDS 361201 - 361707 302 ## bpr_I0658 hypothetical protein + Term 361717 - 361764 18.7 - Term 361699 - 361759 25.0 366 129 Op 1 . - CDS 361770 - 362774 1262 ## COG0180 Tryptophanyl-tRNA synthetase 367 129 Op 2 . - CDS 362794 - 363795 725 ## COG0406 Fructose-2,6-bisphosphatase - Prom 364029 - 364088 2.9 + Prom 363503 - 363562 5.7 368 130 Tu 1 . + CDS 363632 - 364111 490 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Term 363933 - 363976 5.2 369 131 Tu 1 . - CDS 364131 - 364574 481 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 364615 - 364674 3.4 + Prom 364575 - 364634 4.8 370 132 Tu 1 . + CDS 364656 - 365321 733 ## COG2364 Predicted membrane protein 371 133 Op 1 . - CDS 365318 - 365803 544 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 372 133 Op 2 . - CDS 365816 - 366175 473 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 373 133 Op 3 . - CDS 366172 - 366753 501 ## COG1247 Sortase and related acyltransferases 374 133 Op 4 . - CDS 366750 - 367592 788 ## gi|225568217|ref|ZP_03777242.1| hypothetical protein CLOHYLEM_04291 375 133 Op 5 . - CDS 367626 - 368150 630 ## COG1335 Amidases related to nicotinamidase - Prom 368186 - 368245 4.9 - Term 368227 - 368285 4.6 376 134 Op 1 . - CDS 368306 - 368782 582 ## COG1720 Uncharacterized conserved protein 377 134 Op 2 . - CDS 368823 - 369656 636 ## COG0789 Predicted transcriptional regulators - Prom 369692 - 369751 1.6 378 135 Op 1 . - CDS 369804 - 370160 522 ## PROTEIN SUPPORTED gi|239625929|ref|ZP_04668960.1| ribosomal protein L20 379 135 Op 2 . - CDS 370193 - 370390 240 ## PROTEIN SUPPORTED gi|228582464|ref|YP_002853165.1| ribosomal protein L35 380 135 Op 3 . - CDS 370425 - 370919 401 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 - Prom 371117 - 371176 5.8 + Prom 371148 - 371207 8.8 381 136 Tu 1 . + CDS 371251 - 372624 1470 ## COG0733 Na+-dependent transporters of the SNF family + Term 372760 - 372804 0.9 - Term 373237 - 373283 -0.5 382 137 Tu 1 . - CDS 373435 - 374100 676 ## COG3382 Uncharacterized conserved protein - Prom 374166 - 374225 2.6 - Term 374171 - 374200 -0.2 383 138 Op 1 . - CDS 374252 - 375115 914 ## COG1307 Uncharacterized protein conserved in bacteria 384 138 Op 2 . - CDS 375119 - 376540 1621 ## COG0534 Na+-driven multidrug efflux pump - Term 376587 - 376628 6.4 385 139 Tu 1 . - CDS 376676 - 378037 1424 ## Closa_1011 GerA spore germination protein - Prom 378091 - 378150 2.6 - Term 378115 - 378174 25.7 386 140 Op 1 . - CDS 378204 - 378719 676 ## COG0756 dUTPase 387 140 Op 2 12/0.004 - CDS 378712 - 379200 613 ## COG0602 Organic radical activating enzymes 388 140 Op 3 . - CDS 379204 - 381333 2263 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 381474 - 381533 8.6 - Term 381475 - 381502 -0.8 389 141 Op 1 13/0.004 - CDS 381555 - 382328 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 390 141 Op 2 9/0.008 - CDS 382321 - 383202 1205 ## COG4120 ABC-type uncharacterized transport system, permease component 391 141 Op 3 . - CDS 383239 - 384255 1346 ## COG2984 ABC-type uncharacterized transport system, periplasmic component - Prom 384440 - 384499 3.0 - Term 384519 - 384553 -0.9 392 142 Tu 1 . - CDS 384742 - 386127 1082 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 386313 - 386372 5.5 - Term 386402 - 386457 9.2 393 143 Tu 1 . - CDS 386628 - 386852 335 ## gi|225568238|ref|ZP_03777263.1| hypothetical protein CLOHYLEM_04312 - Prom 386877 - 386936 5.5 394 144 Op 1 . - CDS 386958 - 388115 1019 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 395 144 Op 2 . - CDS 388146 - 389438 1151 ## Amir_3209 hypothetical protein 396 144 Op 3 11/0.004 - CDS 389486 - 390472 683 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 397 144 Op 4 . - CDS 390485 - 391549 749 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 398 144 Op 5 . - CDS 391554 - 393020 1338 ## BcerKBAB4_3391 polysaccharide biosynthesis protein 399 144 Op 6 4/0.036 - CDS 393034 - 394491 1258 ## COG4267 Predicted membrane protein 400 144 Op 7 . - CDS 394491 - 395912 1267 ## COG0438 Glycosyltransferase 401 144 Op 8 . - CDS 395909 - 397564 1360 ## gi|225568246|ref|ZP_03777271.1| hypothetical protein CLOHYLEM_04320 402 144 Op 9 . - CDS 397561 - 398307 576 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 403 144 Op 10 . - CDS 398304 - 400523 1623 ## gi|225568248|ref|ZP_03777273.1| hypothetical protein CLOHYLEM_04322 404 144 Op 11 . - CDS 400530 - 401447 751 ## gi|225568249|ref|ZP_03777274.1| hypothetical protein CLOHYLEM_04323 405 144 Op 12 . - CDS 401462 - 403585 2057 ## COG0451 Nucleoside-diphosphate-sugar epimerases 406 144 Op 13 . - CDS 403582 - 403968 464 ## HM1_1178 hypothetical protein - Prom 404001 - 404060 6.0 + Prom 403948 - 404007 6.0 407 145 Op 1 9/0.008 + CDS 404158 - 404880 498 ## COG3279 Response regulator of the LytR/AlgR family 408 145 Op 2 . + CDS 404877 - 406235 728 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 406299 - 406349 10.0 - Term 406240 - 406277 -0.5 409 146 Op 1 . - CDS 406346 - 406687 217 ## gi|225568254|ref|ZP_03777279.1| hypothetical protein CLOHYLEM_04328 410 146 Op 2 . - CDS 406704 - 407561 314 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 411 147 Op 1 . - CDS 407680 - 407829 68 ## gi|225568256|ref|ZP_03777281.1| hypothetical protein CLOHYLEM_04330 412 147 Op 2 . - CDS 407835 - 408251 246 ## gi|225568257|ref|ZP_03777282.1| hypothetical protein CLOHYLEM_04331 413 147 Op 3 . - CDS 408278 - 409126 626 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 414 147 Op 4 . - CDS 409126 - 409815 310 ## Mbar_A0780 hypothetical protein 415 147 Op 5 . - CDS 409812 - 410498 396 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 416 147 Op 6 . - CDS 410485 - 410655 169 ## gi|225568261|ref|ZP_03777286.1| hypothetical protein CLOHYLEM_04335 417 147 Op 7 . - CDS 410672 - 411142 260 ## COG0716 Flavodoxins 418 147 Op 8 . - CDS 411144 - 411587 306 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 419 147 Op 9 . - CDS 411605 - 413050 628 ## COG1262 Uncharacterized conserved protein 420 147 Op 10 . - CDS 413062 - 413760 370 ## COG0716 Flavodoxins 421 147 Op 11 . - CDS 413782 - 414087 365 ## gi|225568266|ref|ZP_03777291.1| hypothetical protein CLOHYLEM_04340 - Prom 414149 - 414208 8.8 - Term 414155 - 414195 7.5 422 148 Tu 1 . - CDS 414228 - 414641 137 ## COG0583 Transcriptional regulator 423 149 Op 1 . - CDS 415498 - 415602 109 ## 424 149 Op 2 . - CDS 415616 - 415699 150 ## - Term 415767 - 415822 15.2 425 150 Op 1 . - CDS 415911 - 416111 95 ## gi|225568270|ref|ZP_03777295.1| hypothetical protein CLOHYLEM_04344 426 150 Op 2 . - CDS 416192 - 417112 1135 ## COG1897 Homoserine trans-succinylase 427 150 Op 3 . - CDS 417115 - 418488 1786 ## COG0628 Predicted permease - Prom 418514 - 418573 9.0 - Term 418530 - 418588 4.7 428 151 Op 1 1/0.168 - CDS 418592 - 420046 1954 ## COG1757 Na+/H+ antiporter 429 151 Op 2 1/0.168 - CDS 420050 - 420985 915 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 430 151 Op 3 . - CDS 421012 - 422259 1377 ## COG1228 Imidazolonepropionase and related amidohydrolases 431 151 Op 4 . - CDS 422277 - 423689 1802 ## COG1288 Predicted membrane protein 432 151 Op 5 3/0.052 - CDS 423694 - 424356 788 ## COG1042 Acyl-CoA synthetase (NDP forming) 433 151 Op 6 . - CDS 424349 - 425803 1636 ## COG1042 Acyl-CoA synthetase (NDP forming) 434 151 Op 7 23/0.000 - CDS 425822 - 426727 865 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 435 151 Op 8 14/0.000 - CDS 426733 - 427920 1509 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 436 151 Op 9 14/0.000 - CDS 427921 - 428187 312 ## COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 437 151 Op 10 . - CDS 428205 - 428747 661 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 438 151 Op 11 . - CDS 428761 - 430305 1112 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 439 151 Op 12 . - CDS 430309 - 430947 658 ## Psed_2086 microcompartments protein 440 151 Op 13 4/0.036 - CDS 430960 - 431223 477 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 441 151 Op 14 . - CDS 431244 - 431507 421 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 442 151 Op 15 . - CDS 431517 - 432968 1647 ## COG0520 Selenocysteine lyase 443 151 Op 16 . - CDS 433009 - 433287 458 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 444 151 Op 17 . - CDS 433290 - 433751 460 ## gi|225568289|ref|ZP_03777314.1| hypothetical protein CLOHYLEM_04363 - Prom 433805 - 433864 8.1 + Prom 433822 - 433881 9.4 445 152 Tu 1 . + CDS 433954 - 434670 724 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 434694 - 434762 25.1 - Term 434694 - 434738 6.0 446 153 Tu 1 . - CDS 434793 - 435524 460 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 435569 - 435628 5.9 447 154 Op 1 . + CDS 435730 - 436470 868 ## COG4126 Hydantoin racemase 448 154 Op 2 2/0.096 + CDS 436505 - 437842 1678 ## COG1457 Purine-cytosine permease and related proteins 449 154 Op 3 . + CDS 437870 - 438964 1259 ## COG3535 Uncharacterized conserved protein 450 154 Op 4 . + CDS 438977 - 440389 1073 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 451 154 Op 5 . + CDS 440386 - 441534 928 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 441566 - 441617 8.0 - Term 441554 - 441605 11.0 452 155 Op 1 . - CDS 441615 - 441935 316 ## CPE2333 hypothetical protein 453 155 Op 2 . - CDS 442006 - 442443 559 ## COG0824 Predicted thioesterase 454 155 Op 3 . - CDS 442460 - 445429 3321 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 455 155 Op 4 . - CDS 445442 - 446869 1578 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 446921 - 446980 6.3 - Term 446902 - 446944 7.5 456 156 Op 1 . - CDS 447015 - 447743 581 ## COG1434 Uncharacterized conserved protein 457 156 Op 2 . - CDS 447728 - 448234 538 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 448278 - 448337 7.0 + Prom 448235 - 448294 5.5 458 157 Tu 1 . + CDS 448325 - 448546 313 ## gi|225568303|ref|ZP_03777328.1| hypothetical protein CLOHYLEM_04377 + Term 448576 - 448610 -0.1 459 158 Tu 1 . - CDS 448549 - 448704 180 ## - Prom 448813 - 448872 5.5 - Term 448879 - 448922 7.9 460 159 Op 1 . - CDS 448930 - 450225 1550 ## COG0104 Adenylosuccinate synthase - Prom 450260 - 450319 6.3 461 159 Op 2 . - CDS 450322 - 451881 1681 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 452128 - 452187 5.0 + Prom 451969 - 452028 5.8 462 160 Tu 1 . + CDS 452065 - 452325 444 ## gi|225568308|ref|ZP_03777333.1| hypothetical protein CLOHYLEM_04382 + Term 452343 - 452383 8.6 - Term 452212 - 452254 -0.8 463 161 Tu 1 . - CDS 452385 - 452822 404 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 452872 - 452931 80.3 464 162 Op 1 . - CDS 452933 - 453814 732 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 465 162 Op 2 . - CDS 453821 - 455488 1800 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 455528 - 455587 4.9 466 163 Tu 1 . - CDS 455597 - 456964 1475 ## COG0534 Na+-driven multidrug efflux pump - Prom 456987 - 457046 6.0 - TRNA 457021 - 457093 80.1 # Thr GGT 0 0 - Term 456985 - 457016 3.1 467 164 Op 1 1/0.168 - CDS 457160 - 457771 862 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 468 164 Op 2 7/0.008 - CDS 457784 - 458536 1136 ## COG0566 rRNA methylases 469 164 Op 3 8/0.008 - CDS 458533 - 458982 267 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 470 164 Op 4 4/0.036 - CDS 458967 - 460373 1569 ## COG0215 Cysteinyl-tRNA synthetase 471 164 Op 5 . - CDS 460375 - 461073 817 ## COG1045 Serine acetyltransferase - Term 461346 - 461396 7.1 472 165 Tu 1 . - CDS 461403 - 462317 413 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 462337 - 462396 6.7 473 166 Op 1 40/0.000 - CDS 462418 - 464475 2263 ## COG0642 Signal transduction histidine kinase 474 166 Op 2 . - CDS 464447 - 465154 890 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 465234 - 465293 4.0 475 167 Op 1 . - CDS 465297 - 466052 680 ## COG0710 3-dehydroquinate dehydratase 476 167 Op 2 . - CDS 466068 - 467081 1024 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases - Prom 467109 - 467168 3.5 - Term 467133 - 467171 7.0 477 168 Op 1 . - CDS 467184 - 467732 731 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 478 168 Op 2 . - CDS 467737 - 468072 540 ## gi|225568324|ref|ZP_03777349.1| hypothetical protein CLOHYLEM_04399 - Prom 468115 - 468174 1.9 + TRNA 468283 - 468355 82.2 # Val TAC 0 0 + TRNA 468400 - 468473 80.9 # Met CAT 0 0 479 169 Tu 1 . - CDS 468616 - 469950 1697 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 470059 - 470118 5.1 - Term 470003 - 470044 9.1 480 170 Tu 1 . - CDS 470223 - 472970 2090 ## bpr_I1471 cell surface protein - Prom 473013 - 473072 4.0 - Term 473209 - 473246 5.3 481 171 Op 1 . - CDS 473267 - 477082 4552 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 477102 - 477161 6.5 482 171 Op 2 . - CDS 477164 - 477874 808 ## Closa_4227 integral membrane protein TIGR01906 - Prom 477945 - 478004 7.0 + Prom 477889 - 477948 7.2 483 172 Tu 1 . + CDS 477971 - 478867 185 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Term 478990 - 479027 -0.5 - Term 478812 - 478852 1.2 484 173 Op 1 . - CDS 478875 - 481259 2685 ## COG1199 Rad3-related DNA helicases 485 173 Op 2 . - CDS 481256 - 481966 624 ## Cphy_0819 hypothetical protein 486 173 Op 3 . - CDS 482048 - 483364 1250 ## COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif - Prom 483436 - 483495 6.7 + Prom 483488 - 483547 5.0 487 174 Op 1 . + CDS 483585 - 483992 390 ## gi|225568336|ref|ZP_03777361.1| hypothetical protein CLOHYLEM_04413 488 174 Op 2 . + CDS 484014 - 486752 2246 ## BSU21040 hypothetical protein + Term 486916 - 486966 16.5 + Prom 486856 - 486915 4.8 489 175 Op 1 . + CDS 487008 - 487271 459 ## gi|225568338|ref|ZP_03777363.1| hypothetical protein CLOHYLEM_04415 490 175 Op 2 . + CDS 487301 - 487849 560 ## gi|225568340|ref|ZP_03777365.1| hypothetical protein CLOHYLEM_04417 491 175 Op 3 . + CDS 487849 - 488640 608 ## gi|225568341|ref|ZP_03777366.1| hypothetical protein CLOHYLEM_04418 492 175 Op 4 . + CDS 488687 - 489418 933 ## CbC4_4178 hypothetical protein + Term 489519 - 489562 10.2 + Prom 489730 - 489789 4.1 493 176 Op 1 . + CDS 489850 - 490389 570 ## gi|225568344|ref|ZP_03777369.1| hypothetical protein CLOHYLEM_04421 494 176 Op 2 . + CDS 490450 - 490647 250 ## gi|225568345|ref|ZP_03777370.1| hypothetical protein CLOHYLEM_04422 495 176 Op 3 . + CDS 490665 - 490955 265 ## gi|225568346|ref|ZP_03777371.1| hypothetical protein CLOHYLEM_04423 - Term 492118 - 492154 -0.8 496 177 Tu 1 . - CDS 492180 - 492638 52 ## gi|225568349|ref|ZP_03777374.1| hypothetical protein CLOHYLEM_04426 - Prom 492760 - 492819 8.7 497 178 Tu 1 . - CDS 493834 - 494304 85 ## gi|225568352|ref|ZP_03777377.1| hypothetical protein CLOHYLEM_04429 - Prom 494482 - 494541 7.1 498 179 Op 1 . - CDS 494979 - 495104 70 ## 499 179 Op 2 . - CDS 495098 - 495478 102 ## gi|225568354|ref|ZP_03777379.1| hypothetical protein CLOHYLEM_04431 - Prom 495526 - 495585 2.3 500 180 Tu 1 . - CDS 495590 - 495994 198 ## gi|225568355|ref|ZP_03777380.1| hypothetical protein CLOHYLEM_04432 - Prom 496073 - 496132 7.3 501 181 Op 1 . - CDS 496475 - 496696 152 ## gi|225568355|ref|ZP_03777380.1| hypothetical protein CLOHYLEM_04432 502 181 Op 2 . - CDS 496708 - 496857 125 ## - Prom 497080 - 497139 4.6 503 182 Tu 1 . - CDS 497875 - 498477 50 ## gi|225568358|ref|ZP_03777383.1| hypothetical protein CLOHYLEM_04435 - Prom 498536 - 498595 6.9 504 183 Tu 1 . - CDS 499241 - 499732 -110 ## gi|225568360|ref|ZP_03777385.1| hypothetical protein CLOHYLEM_04437 - Prom 499835 - 499894 5.3 505 184 Tu 1 . + CDS 500616 - 500900 158 ## gi|225568361|ref|ZP_03777386.1| hypothetical protein CLOHYLEM_04438 + Term 501149 - 501193 1.6 + Prom 501171 - 501230 5.1 506 185 Tu 1 . + CDS 501271 - 501561 146 ## gi|225568362|ref|ZP_03777387.1| hypothetical protein CLOHYLEM_04439 + Term 501629 - 501665 1.0 - Term 502123 - 502163 -0.6 507 186 Tu 1 . - CDS 502260 - 502829 165 ## gi|225568363|ref|ZP_03777388.1| hypothetical protein CLOHYLEM_04440 - Prom 502860 - 502919 7.4 + Prom 502801 - 502860 6.8 508 187 Tu 1 . + CDS 502941 - 503048 79 ## + Prom 503134 - 503193 5.2 509 188 Op 1 . + CDS 503213 - 505723 1164 ## gi|225568364|ref|ZP_03777389.1| hypothetical protein CLOHYLEM_04441 510 188 Op 2 . + CDS 505795 - 508770 2819 ## COG5492 Bacterial surface proteins containing Ig-like domains 511 188 Op 3 . + CDS 508837 - 509937 1014 ## gi|225568366|ref|ZP_03777391.1| hypothetical protein CLOHYLEM_04443 512 188 Op 4 . + CDS 509940 - 514541 4409 ## COG4926 Phage-related protein 513 189 Tu 1 . + CDS 514604 - 516703 1151 ## gi|225568369|ref|ZP_03777394.1| hypothetical protein CLOHYLEM_04446 + Term 516731 - 516757 -1.0 - Term 517080 - 517111 2.0 514 190 Tu 1 . - CDS 517138 - 518097 326 ## COG0582 Integrase - Prom 518280 - 518339 6.5 + Prom 518715 - 518774 4.9 515 191 Op 1 . + CDS 519015 - 519473 372 ## gi|225568372|ref|ZP_03777397.1| hypothetical protein CLOHYLEM_04449 516 191 Op 2 1/0.168 + CDS 519478 - 520281 356 ## COG3409 Putative peptidoglycan-binding domain-containing protein + Term 520301 - 520337 -0.0 + Prom 520321 - 520380 7.2 517 192 Op 1 40/0.000 + CDS 520506 - 521204 594 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 521310 - 521369 2.1 518 192 Op 2 4/0.036 + CDS 521402 - 522238 562 ## COG0642 Signal transduction histidine kinase + Term 522245 - 522286 1.0 519 193 Op 1 36/0.000 + CDS 522310 - 522993 337 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 520 193 Op 2 . + CDS 522990 - 524801 1182 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 524830 - 524867 5.3 - Term 524818 - 524855 5.3 521 194 Op 1 . - CDS 524881 - 525126 146 ## gi|225568379|ref|ZP_03777404.1| hypothetical protein CLOHYLEM_04456 522 194 Op 2 . - CDS 525157 - 526086 818 ## gi|225568380|ref|ZP_03777405.1| hypothetical protein CLOHYLEM_04457 523 194 Op 3 . - CDS 526092 - 526259 57 ## gi|225568381|ref|ZP_03777406.1| hypothetical protein CLOHYLEM_04458 - Prom 526377 - 526436 4.5 + Prom 526329 - 526388 5.6 524 195 Tu 1 . + CDS 526410 - 526925 227 ## gi|225568382|ref|ZP_03777407.1| hypothetical protein CLOHYLEM_04459 525 196 Tu 1 . - CDS 526947 - 527564 703 ## COG0489 ATPases involved in chromosome partitioning - Prom 527646 - 527705 80.3 + Prom 527629 - 527688 80.4 526 197 Op 1 . + CDS 527735 - 528331 627 ## COG1158 Transcription termination factor 527 197 Op 2 . + CDS 528432 - 528635 327 ## PROTEIN SUPPORTED gi|227871848|ref|ZP_03990248.1| possible ribosomal protein L31 + Term 528649 - 528686 6.4 528 198 Op 1 1/0.168 + CDS 528706 - 529641 1057 ## COG3872 Predicted metal-dependent enzyme 529 198 Op 2 32/0.000 + CDS 529589 - 530515 416 ## PROTEIN SUPPORTED gi|223485211|ref|YP_002587537.1| ribosomal protein L11 methyltransferase 530 198 Op 3 . + CDS 530549 - 531622 1344 ## COG0216 Protein chain release factor A 531 198 Op 4 . + CDS 531629 - 533383 2019 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 532 198 Op 5 . + CDS 533406 - 535370 2219 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 533 198 Op 6 . + CDS 535442 - 536368 1005 ## COG4866 Uncharacterized conserved protein 534 198 Op 7 . + CDS 536365 - 537555 1621 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 535 198 Op 8 . + CDS 537577 - 538632 1140 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 536 198 Op 9 . + CDS 538644 - 539156 763 ## COG2426 Predicted membrane protein 537 198 Op 10 . + CDS 539166 - 539990 1006 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 540022 - 540060 4.2 + Prom 540157 - 540216 8.3 538 199 Op 1 . + CDS 540278 - 540895 729 ## Cbei_2388 hypothetical protein 539 199 Op 2 4/0.036 + CDS 540929 - 542413 1716 ## COG2407 L-fucose isomerase and related proteins 540 199 Op 3 . + CDS 542418 - 543878 1715 ## COG1070 Sugar (pentulose and hexulose) kinases - Term 543675 - 543711 1.1 541 200 Tu 1 . - CDS 543838 - 544113 155 ## COG3326 Predicted membrane protein - Prom 544240 - 544299 4.6 + Prom 544160 - 544219 5.6 542 201 Op 1 . + CDS 544279 - 545238 1274 ## COG0524 Sugar kinases, ribokinase family 543 201 Op 2 10/0.008 + CDS 545274 - 546599 1335 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 544 201 Op 3 . + CDS 546599 - 547333 925 ## COG3442 Predicted glutamine amidotransferase + Term 547551 - 547601 5.0 - Term 547072 - 547114 2.3 545 202 Tu 1 . - CDS 547347 - 547700 337 ## gi|225568403|ref|ZP_03777428.1| hypothetical protein CLOHYLEM_04480 - Prom 547888 - 547947 6.2 + Prom 547800 - 547859 9.2 546 203 Op 1 . + CDS 547895 - 548356 635 ## gi|225568404|ref|ZP_03777429.1| hypothetical protein CLOHYLEM_04481 547 203 Op 2 . + CDS 548436 - 549491 1353 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 548 203 Op 3 . + CDS 549484 - 553947 4610 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 549 203 Op 4 . + CDS 553992 - 554858 676 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 550 203 Op 5 . + CDS 554914 - 555411 304 ## gi|225568408|ref|ZP_03777433.1| hypothetical protein CLOHYLEM_04485 + Term 555644 - 555688 8.0 + Prom 555543 - 555602 3.4 551 204 Op 1 . + CDS 555704 - 557035 1718 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 552 204 Op 2 . + CDS 557060 - 557971 1002 ## COG2378 Predicted transcriptional regulator + Term 557977 - 558006 -0.7 + Prom 558027 - 558086 6.6 553 205 Op 1 . + CDS 558116 - 558595 572 ## COG3467 Predicted flavin-nucleotide-binding protein 554 205 Op 2 . + CDS 558613 - 559353 656 ## Ccel_1063 hypothetical protein 555 205 Op 3 . + CDS 559421 - 560731 1615 ## COG1541 Coenzyme F390 synthetase 556 205 Op 4 11/0.004 + CDS 560735 - 562489 1633 ## COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 557 205 Op 5 . + CDS 562489 - 563067 793 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 558 205 Op 6 3/0.052 + CDS 563106 - 563525 327 ## COG4747 ACT domain-containing protein 559 205 Op 7 3/0.052 + CDS 563550 - 564881 1683 ## COG1541 Coenzyme F390 synthetase 560 205 Op 8 . + CDS 564899 - 565342 568 ## COG4747 ACT domain-containing protein + Term 565356 - 565391 5.0 - Term 565342 - 565379 6.2 561 206 Tu 1 . - CDS 565487 - 565687 298 ## COG1278 Cold shock proteins - Prom 565713 - 565772 10.7 562 207 Op 1 10/0.008 + CDS 566052 - 568058 2091 ## COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit 563 207 Op 2 . + CDS 568071 - 569744 1577 ## COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit 564 207 Op 3 38/0.000 + CDS 569783 - 571366 1507 ## COG0747 ABC-type dipeptide transport system, periplasmic component 565 207 Op 4 49/0.000 + CDS 571391 - 572398 263 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 566 207 Op 5 . + CDS 572398 - 573231 1072 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 567 207 Op 6 . + CDS 573249 - 574337 1203 ## COG0006 Xaa-Pro aminopeptidase 568 207 Op 7 44/0.000 + CDS 574354 - 575334 598 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 569 207 Op 8 . + CDS 575340 - 576332 890 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 570 207 Op 9 . + CDS 576351 - 576836 503 ## Amet_4120 hypothetical protein + Term 576852 - 576892 -0.3 + Prom 576843 - 576902 2.2 571 208 Tu 1 . + CDS 576952 - 577602 684 ## COG1802 Transcriptional regulators + Term 577699 - 577743 8.1 + Prom 577930 - 577989 4.7 572 209 Op 1 . + CDS 578021 - 578215 140 ## CLOST_2283 hypothetical protein 573 209 Op 2 1/0.168 + CDS 578233 - 579138 458 ## COG0583 Transcriptional regulator + Term 579152 - 579213 19.4 + Prom 579223 - 579282 6.3 574 210 Op 1 1/0.168 + CDS 579311 - 579814 423 ## COG0716 Flavodoxins 575 210 Op 2 1/0.168 + CDS 579843 - 580598 652 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 576 210 Op 3 2/0.096 + CDS 580609 - 581598 727 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 577 210 Op 4 10/0.008 + CDS 581612 - 582442 913 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 578 210 Op 5 . + CDS 582529 - 583353 759 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 583361 - 583400 8.9 579 211 Op 1 1/0.168 + CDS 583426 - 584172 565 ## COG0716 Flavodoxins 580 211 Op 2 . + CDS 584195 - 584863 503 ## COG0716 Flavodoxins 581 211 Op 3 . + CDS 584868 - 585791 649 ## COG4925 Uncharacterized conserved protein 582 211 Op 4 . + CDS 585810 - 586499 609 ## Mbar_A0780 hypothetical protein 583 211 Op 5 1/0.168 + CDS 586560 - 587672 831 ## COG2768 Uncharacterized Fe-S center protein 584 211 Op 6 . + CDS 587665 - 588567 591 ## COG0701 Predicted permeases 585 211 Op 7 . + CDS 588625 - 589338 163 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 589358 - 589397 11.4 586 212 Tu 1 . + CDS 589400 - 589909 -15 ## CDR20291_1761 hypothetical protein 587 213 Op 1 . + CDS 590031 - 590483 -166 ## 588 213 Op 2 . + CDS 590568 - 590798 186 ## gi|225568448|ref|ZP_03777473.1| hypothetical protein CLOHYLEM_04525 589 213 Op 3 . + CDS 590890 - 592530 969 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 592615 - 592664 6.1 - Term 592510 - 592545 7.2 590 214 Tu 1 . - CDS 592631 - 593518 771 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 593752 - 593811 6.8 + Prom 593813 - 593872 3.0 591 215 Tu 1 1/0.168 + CDS 593943 - 594374 478 ## COG1959 Predicted transcriptional regulator + Term 594386 - 594419 -0.5 + Prom 594377 - 594436 3.7 592 216 Op 1 . + CDS 594459 - 596276 1254 ## COG0286 Type I restriction-modification system methyltransferase subunit 593 216 Op 2 . + CDS 596266 - 597276 367 ## ELI_2924 putative S-CspCI + Term 597280 - 597317 6.2 + Prom 597313 - 597372 5.7 594 217 Op 1 . + CDS 597419 - 597859 707 ## COG1959 Predicted transcriptional regulator 595 217 Op 2 . + CDS 597912 - 599195 1410 ## COG2873 O-acetylhomoserine sulfhydrylase 596 217 Op 3 . + CDS 599233 - 600162 782 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 597 217 Op 4 . + CDS 600244 - 601869 1760 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 601893 - 601941 15.2 + Prom 602028 - 602087 5.4 598 218 Op 1 10/0.008 + CDS 602151 - 602897 825 ## COG1349 Transcriptional regulators of sugar metabolism 599 218 Op 2 19/0.000 + CDS 602897 - 603817 1110 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 600 218 Op 3 2/0.096 + CDS 603831 - 605762 2328 ## COG1299 Phosphotransferase system, fructose-specific IIC component 601 218 Op 4 25/0.000 + CDS 605806 - 606063 380 ## COG1925 Phosphotransferase system, HPr-related proteins 602 218 Op 5 . + CDS 606091 - 607710 1908 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 607718 - 607755 5.1 + Prom 607718 - 607777 5.5 603 219 Tu 1 . + CDS 607816 - 609198 1774 ## COG2252 Permeases + Term 609213 - 609264 19.0 + Prom 609314 - 609373 5.5 604 220 Op 1 9/0.008 + CDS 609414 - 610133 647 ## COG3279 Response regulator of the LytR/AlgR family 605 220 Op 2 . + CDS 610134 - 611435 1083 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 606 221 Op 1 . - CDS 611432 - 612868 1257 ## COG1757 Na+/H+ antiporter 607 221 Op 2 . - CDS 612894 - 613949 1260 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 608 221 Op 3 . - CDS 613933 - 614319 234 ## HMPREF9243_1906 hypothetical protein - Prom 614343 - 614402 5.0 + Prom 614666 - 614725 6.8 609 222 Op 1 . + CDS 614749 - 616068 1442 ## COG3048 D-serine dehydratase 610 222 Op 2 2/0.096 + CDS 616096 - 617118 1127 ## COG0303 Molybdopterin biosynthesis enzyme 611 222 Op 3 . + CDS 617121 - 618161 978 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 612 222 Op 4 . + CDS 618212 - 619639 340 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 613 222 Op 5 . + CDS 619643 - 621442 2128 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 621557 - 621614 6.2 + Prom 621532 - 621591 2.9 614 223 Op 1 . + CDS 621629 - 622912 1249 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 615 223 Op 2 12/0.004 + CDS 622917 - 625220 2386 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 616 223 Op 3 15/0.000 + CDS 625213 - 626097 854 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 617 223 Op 4 . + CDS 626184 - 626612 447 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 618 223 Op 5 . + CDS 626636 - 626728 109 ## - Term 626626 - 626669 15.1 619 224 Tu 1 . - CDS 626687 - 628255 1191 ## COG2508 Regulator of polyketide synthase expression - Prom 628393 - 628452 9.7 + Prom 628409 - 628468 7.5 620 225 Op 1 . + CDS 628537 - 629718 1430 ## COG0477 Permeases of the major facilitator superfamily 621 225 Op 2 . + CDS 629719 - 631716 2250 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 622 225 Op 3 . + CDS 631735 - 632898 1260 ## COG1454 Alcohol dehydrogenase, class IV 623 225 Op 4 . + CDS 632915 - 634093 1210 ## COG1454 Alcohol dehydrogenase, class IV + Term 634275 - 634326 11.0 + Prom 634191 - 634250 4.1 624 226 Tu 1 . + CDS 634399 - 637056 2591 ## COG0474 Cation transport ATPase + Term 637068 - 637115 14.2 625 227 Tu 1 . - CDS 637048 - 638436 1125 ## COG0534 Na+-driven multidrug efflux pump - Prom 638471 - 638530 5.7 + Prom 638462 - 638521 5.7 626 228 Tu 1 . + CDS 638558 - 639091 654 ## COG1695 Predicted transcriptional regulators 627 229 Op 1 . - CDS 639221 - 640555 391 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 628 229 Op 2 8/0.008 - CDS 640570 - 641517 1241 ## COG0549 Carbamate kinase 629 229 Op 3 . - CDS 641537 - 642730 1330 ## COG0078 Ornithine carbamoyltransferase 630 229 Op 4 4/0.036 - CDS 642758 - 644068 1109 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 631 229 Op 5 1/0.168 - CDS 644136 - 645386 1253 ## COG1171 Threonine dehydratase 632 229 Op 6 . - CDS 645416 - 646066 672 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 646155 - 646214 15.5 + Prom 646197 - 646256 7.7 633 230 Op 1 1/0.168 + CDS 646504 - 647835 1616 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 634 230 Op 2 1/0.168 + CDS 647858 - 650848 2813 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 635 230 Op 3 . + CDS 650869 - 652251 1322 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 636 230 Op 4 . + CDS 652266 - 653030 865 ## CLH_0604 conserved hypothetical protein TIGR03172 637 230 Op 5 6/0.016 + CDS 653014 - 654369 1196 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 638 230 Op 6 . + CDS 654389 - 656947 3057 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs + Term 657024 - 657061 5.0 + Prom 657005 - 657064 7.0 639 231 Op 1 23/0.000 + CDS 657116 - 657964 1178 ## COG0725 ABC-type molybdate transport system, periplasmic component 640 231 Op 2 6/0.016 + CDS 658010 - 658687 676 ## COG4149 ABC-type molybdate transport system, permease component 641 231 Op 3 . + CDS 658687 - 659700 949 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 642 231 Op 4 . + CDS 659706 - 660074 302 ## COG2005 N-terminal domain of molybdenum-binding protein + Prom 660080 - 660139 4.9 643 232 Op 1 . + CDS 660171 - 660923 823 ## COG5523 Predicted integral membrane protein 644 232 Op 2 . + CDS 660961 - 662658 1987 ## COG1001 Adenine deaminase 645 232 Op 3 . + CDS 662724 - 663641 885 ## COG0657 Esterase/lipase 646 232 Op 4 . + CDS 663646 - 665466 1663 ## Clole_3204 hypothetical protein 647 232 Op 5 . + CDS 665509 - 665688 307 ## Closa_1280 hypothetical protein + Term 665707 - 665763 21.6 - Term 665694 - 665752 20.0 648 233 Tu 1 . - CDS 665777 - 666544 811 ## COG2188 Transcriptional regulators - Prom 666604 - 666663 12.3 + Prom 666580 - 666639 10.3 649 234 Tu 1 . + CDS 666759 - 667961 1212 ## COG0477 Permeases of the major facilitator superfamily + Prom 667977 - 668036 8.0 650 235 Op 1 . + CDS 668123 - 668956 229 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 651 235 Op 2 . + CDS 668977 - 669429 489 ## gi|225568516|ref|ZP_03777541.1| hypothetical protein CLOHYLEM_04593 652 235 Op 3 16/0.000 + CDS 669448 - 670410 1301 ## COG1879 ABC-type sugar transport system, periplasmic component 653 235 Op 4 21/0.000 + CDS 670549 - 672045 200 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 654 235 Op 5 . + CDS 672020 - 672997 871 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 655 235 Op 6 . + CDS 673015 - 673848 726 ## COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase 656 235 Op 7 . + CDS 673845 - 674624 757 ## COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase 657 235 Op 8 3/0.052 + CDS 674643 - 675476 851 ## COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase 658 235 Op 9 3/0.052 + CDS 675492 - 676706 985 ## COG5441 Uncharacterized conserved protein 659 235 Op 10 . + CDS 676703 - 677545 703 ## COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase 660 235 Op 11 . + CDS 677557 - 678429 447 ## COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase 661 235 Op 12 3/0.052 + CDS 678405 - 679229 503 ## COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase 662 235 Op 13 . + CDS 679258 - 680472 1232 ## COG5441 Uncharacterized conserved protein 663 235 Op 14 . + CDS 680540 - 681304 853 ## COG2188 Transcriptional regulators + Term 681315 - 681362 11.5 664 236 Tu 1 . + CDS 681398 - 682171 604 ## COG0149 Triosephosphate isomerase + Prom 682277 - 682336 4.1 665 237 Op 1 16/0.000 + CDS 682385 - 683470 1425 ## COG1879 ABC-type sugar transport system, periplasmic component 666 237 Op 2 10/0.008 + CDS 683545 - 685044 1518 ## COG1129 ABC-type sugar transport system, ATPase component 667 237 Op 3 . + CDS 685074 - 686303 1731 ## COG4211 ABC-type glucose/galactose transport system, permease component + Term 686328 - 686387 18.5 + Prom 686333 - 686392 4.9 668 238 Op 1 7/0.008 + CDS 686413 - 688047 1814 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 669 238 Op 2 . + CDS 688091 - 689875 1771 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 670 238 Op 3 . + CDS 689877 - 690848 995 ## Cbei_4429 periplasmic binding protein/LacI transcriptional regulator 671 238 Op 4 1/0.168 + CDS 690888 - 691919 1194 ## COG1879 ABC-type sugar transport system, periplasmic component 672 238 Op 5 . + CDS 691946 - 696178 4054 ## COG0642 Signal transduction histidine kinase + Term 696244 - 696299 15.2 - Term 696234 - 696261 -0.4 673 239 Op 1 . - CDS 696278 - 696949 436 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 674 239 Op 2 . - CDS 696952 - 698409 520 ## ELI_2456 transcriptional regulator - Prom 698449 - 698508 6.8 + Prom 698360 - 698419 4.0 675 240 Op 1 . + CDS 698444 - 698602 136 ## gi|225568540|ref|ZP_03777565.1| hypothetical protein CLOHYLEM_04617 676 240 Op 2 . + CDS 698616 - 701246 2578 ## COG0642 Signal transduction histidine kinase + Term 701281 - 701320 3.2 + Prom 701343 - 701402 8.0 677 241 Op 1 . + CDS 701533 - 702147 263 ## gi|225568543|ref|ZP_03777568.1| hypothetical protein CLOHYLEM_04620 678 241 Op 2 . + CDS 702128 - 702352 214 ## gi|225568544|ref|ZP_03777569.1| hypothetical protein CLOHYLEM_04621 + Term 702373 - 702416 5.2 + Prom 702375 - 702434 5.8 679 242 Op 1 7/0.008 + CDS 702496 - 704478 2117 ## COG0556 Helicase subunit of the DNA excision repair complex 680 242 Op 2 . + CDS 704553 - 707396 3033 ## COG0178 Excinuclease ATPase subunit + Term 707432 - 707489 23.1 + Prom 707566 - 707625 5.0 681 243 Op 1 . + CDS 707712 - 708701 1106 ## COG1077 Actin-like ATPase involved in cell morphogenesis 682 243 Op 2 . + CDS 708701 - 710911 2092 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 683 244 Tu 1 . + CDS 711040 - 711615 319 ## COG1040 Predicted amidophosphoribosyltransferases + Prom 711618 - 711677 3.8 684 245 Op 1 . + CDS 711699 - 712067 533 ## Cphy_3553 hypothetical protein 685 245 Op 2 . + CDS 712068 - 713228 1556 ## bpr_I2588 hypothetical protein 686 245 Op 3 7/0.008 + CDS 713269 - 714159 1086 ## COG1624 Uncharacterized conserved protein 687 245 Op 4 . + CDS 714137 - 715399 1404 ## COG4856 Uncharacterized protein conserved in bacteria 688 245 Op 5 . + CDS 715409 - 715672 357 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 715747 - 715794 10.3 + Prom 715854 - 715913 8.8 689 246 Op 1 . + CDS 715941 - 716315 276 ## gi|225568558|ref|ZP_03777583.1| hypothetical protein CLOHYLEM_04635 690 246 Op 2 . + CDS 716308 - 718077 1446 ## BBR47_42060 hypothetical protein 691 246 Op 3 . + CDS 718074 - 718877 641 ## gi|225568560|ref|ZP_03777585.1| hypothetical protein CLOHYLEM_04637 692 246 Op 4 . + CDS 718947 - 719909 931 ## BBR47_42250 hypothetical protein 693 246 Op 5 . + CDS 719928 - 721967 2072 ## gi|225568563|ref|ZP_03777588.1| hypothetical protein CLOHYLEM_04640 694 246 Op 6 . + CDS 721971 - 724271 2442 ## gi|225568564|ref|ZP_03777589.1| hypothetical protein CLOHYLEM_04641 695 246 Op 7 . + CDS 724276 - 725961 1851 ## COG3497 Phage tail sheath protein FI 696 246 Op 8 . + CDS 725988 - 726530 653 ## Fjoh_3151 phage tail protein 697 246 Op 9 . + CDS 726574 - 726936 480 ## BBR47_42170 hypothetical protein 698 246 Op 10 . + CDS 726969 - 727127 139 ## gi|225568568|ref|ZP_03777593.1| hypothetical protein CLOHYLEM_04645 699 246 Op 11 . + CDS 727127 - 727549 463 ## gi|225568569|ref|ZP_03777594.1| hypothetical protein CLOHYLEM_04646 700 246 Op 12 . + CDS 727546 - 728049 479 ## gi|225568570|ref|ZP_03777595.1| hypothetical protein CLOHYLEM_04647 701 246 Op 13 . + CDS 728064 - 728528 459 ## gi|225568571|ref|ZP_03777596.1| hypothetical protein CLOHYLEM_04648 702 246 Op 14 . + CDS 728522 - 728971 395 ## CAP2UW1_3670 hypothetical protein 703 246 Op 15 1/0.168 + CDS 728952 - 730082 1253 ## COG3500 Phage protein D 704 246 Op 16 . + CDS 730097 - 730849 793 ## COG3501 Uncharacterized protein conserved in bacteria 705 246 Op 17 . + CDS 730899 - 731288 480 ## COG3628 Phage baseplate assembly protein W 706 246 Op 18 . + CDS 731305 - 734091 1881 ## BBR47_42090 hypothetical protein 707 246 Op 19 . + CDS 734085 - 734249 112 ## gi|225568577|ref|ZP_03777602.1| hypothetical protein CLOHYLEM_04654 708 247 Tu 1 . - CDS 734334 - 734552 261 ## gi|225568578|ref|ZP_03777603.1| hypothetical protein CLOHYLEM_04655 - Prom 734634 - 734693 1.8 - Term 734637 - 734677 4.1 709 248 Op 1 . - CDS 734696 - 735070 581 ## COG0251 Putative translation initiation inhibitor, yjgF family 710 248 Op 2 . - CDS 735074 - 736024 1059 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog 711 248 Op 3 . - CDS 736029 - 737345 1722 ## COG0534 Na+-driven multidrug efflux pump - Prom 737384 - 737443 80.3 712 249 Tu 1 . - CDS 737507 - 738691 1370 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 738742 - 738801 6.6 - Term 738762 - 738821 24.0 713 250 Op 1 . - CDS 738835 - 739989 1226 ## ELI_2253 hypothetical protein 714 250 Op 2 . - CDS 739976 - 741103 1289 ## Cphy_1224 ABC-2 type transporter 715 250 Op 3 . - CDS 741115 - 742044 1111 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 742071 - 742130 5.2 + Prom 742050 - 742109 6.1 716 251 Op 1 19/0.000 + CDS 742160 - 743221 957 ## COG4585 Signal transduction histidine kinase 717 251 Op 2 . + CDS 743228 - 743848 842 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 718 251 Op 3 . + CDS 743882 - 745996 1910 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Term 745997 - 746028 0.1 719 252 Tu 1 . - CDS 746056 - 747417 1079 ## COG0534 Na+-driven multidrug efflux pump - Prom 747549 - 747608 3.1 - Term 747560 - 747599 -0.9 720 253 Tu 1 . - CDS 747610 - 747702 77 ## 721 254 Op 1 . - CDS 747767 - 748762 409 ## Kkor_1163 collagen triple helix repeat-containing protein - Prom 748832 - 748891 2.7 - Term 748848 - 748887 9.1 722 254 Op 2 . - CDS 748894 - 749970 1095 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Prom 750002 - 750061 80.3 723 255 Tu 1 . - CDS 750063 - 750179 141 ## gi|167758848|ref|ZP_02430975.1| hypothetical protein CLOSCI_01191 - Term 750206 - 750258 10.0 724 256 Op 1 29/0.000 - CDS 750300 - 752180 2323 ## COG0443 Molecular chaperone 725 256 Op 2 21/0.000 - CDS 752218 - 752901 965 ## COG0576 Molecular chaperone GrpE (heat shock protein) 726 256 Op 3 . - CDS 752919 - 753962 1338 ## COG1420 Transcriptional regulator of heat shock gene - Prom 754029 - 754088 7.4 - Term 754144 - 754192 6.0 727 257 Tu 1 . - CDS 754230 - 754523 428 ## gi|225568596|ref|ZP_03777621.1| hypothetical protein CLOHYLEM_04673 - Prom 754560 - 754619 7.0 + Prom 754596 - 754655 8.3 728 258 Op 1 . + CDS 754699 - 755427 222 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 729 258 Op 2 . + CDS 755429 - 756274 1003 ## ELI_2348 hypothetical protein + Term 756280 - 756336 13.3 - Term 756271 - 756320 7.1 730 259 Op 1 . - CDS 756335 - 757651 1487 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 731 259 Op 2 . - CDS 757638 - 758441 888 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 732 259 Op 3 . - CDS 758462 - 759217 690 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 759312 - 759371 5.4 + Prom 759271 - 759330 8.7 733 260 Tu 1 . + CDS 759362 - 760732 1583 ## COG0534 Na+-driven multidrug efflux pump + Term 760964 - 761011 -0.6 - Term 761101 - 761141 9.2 734 261 Op 1 . - CDS 761308 - 761877 635 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 735 261 Op 2 . - CDS 761902 - 763548 1934 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 763729 - 763788 4.5 + Prom 763619 - 763678 4.3 736 262 Tu 1 . + CDS 763744 - 764430 278 ## PROTEIN SUPPORTED gi|228002590|ref|ZP_04049584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P - Term 764351 - 764423 -0.2 737 263 Op 1 . - CDS 764445 - 764861 508 ## SpiBuddy_2157 C_GCAxxG_C_C family protein 738 263 Op 2 . - CDS 764891 - 766813 1952 ## COG0171 NAD synthase 739 263 Op 3 1/0.168 - CDS 766841 - 767716 1181 ## COG1281 Disulfide bond chaperones of the HSP33 family 740 263 Op 4 . - CDS 767737 - 768492 889 ## COG0500 SAM-dependent methyltransferases - Prom 768534 - 768593 7.0 - Term 768584 - 768632 14.1 741 264 Op 1 1/0.168 - CDS 768654 - 770588 2367 ## COG1511 Predicted membrane protein 742 264 Op 2 . - CDS 770606 - 772687 2588 ## COG1033 Predicted exporters of the RND superfamily - Prom 772739 - 772798 6.2 + Prom 772666 - 772725 2.5 743 265 Tu 1 . + CDS 772790 - 773482 696 ## Clole_0058 TetR family transcriptional regulator - Term 773476 - 773531 4.4 744 266 Tu 1 . - CDS 773536 - 774561 1084 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 774602 - 774661 6.2 745 267 Op 1 32/0.000 - CDS 774669 - 775184 657 ## COG0440 Acetolactate synthase, small (regulatory) subunit 746 267 Op 2 1/0.168 - CDS 775200 - 776921 2026 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 777095 - 777154 3.0 - Term 777034 - 777066 -0.1 747 268 Op 1 . - CDS 777283 - 778476 1022 ## COG0438 Glycosyltransferase 748 268 Op 2 16/0.000 - CDS 778473 - 778964 597 ## COG0262 Dihydrofolate reductase 749 268 Op 3 . - CDS 778977 - 779825 1042 ## COG0207 Thymidylate synthase - Prom 779849 - 779908 4.6 - Term 779851 - 779895 0.6 750 269 Op 1 . - CDS 779941 - 780225 322 ## Clocel_2128 hypothetical protein 751 269 Op 2 . - CDS 780256 - 780687 650 ## COG0716 Flavodoxins 752 269 Op 3 . - CDS 780719 - 781327 621 ## Closa_2904 hypothetical protein - Prom 781385 - 781444 9.8 - Term 781475 - 781534 23.6 753 270 Op 1 . - CDS 781575 - 782006 473 ## Clole_3441 MarR family transcriptional regulator - Prom 782036 - 782095 1.5 - Term 782026 - 782067 3.3 754 270 Op 2 . - CDS 782100 - 782813 1075 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump - Term 782862 - 782894 -0.3 755 271 Tu 1 . - CDS 782951 - 783511 801 ## Closa_2162 hypothetical protein 756 272 Op 1 . - CDS 783702 - 785090 1496 ## COG0534 Na+-driven multidrug efflux pump 757 272 Op 2 . - CDS 785107 - 786393 1718 ## COG0460 Homoserine dehydrogenase - Prom 786417 - 786476 2.6 758 273 Op 1 . - CDS 786485 - 787033 473 ## COG0778 Nitroreductase 759 273 Op 2 . - CDS 787078 - 787275 68 ## - TRNA 787116 - 787188 80.5 # Gly GCC 0 0 760 273 Op 3 . - CDS 787345 - 788568 799 ## ELI_4338 putative signal peptidase I - Prom 788602 - 788661 7.1 - Term 788607 - 788665 8.8 761 274 Tu 1 . - CDS 788688 - 789191 515 ## gi|225568632|ref|ZP_03777657.1| hypothetical protein CLOHYLEM_04710 - Prom 789232 - 789291 5.1 762 275 Op 1 . - CDS 789323 - 790237 981 ## COG0583 Transcriptional regulator 763 275 Op 2 13/0.004 - CDS 790253 - 792040 2189 ## COG0173 Aspartyl-tRNA synthetase 764 275 Op 3 . - CDS 792069 - 793334 1580 ## COG0124 Histidyl-tRNA synthetase 765 275 Op 4 1/0.168 - CDS 793325 - 794791 1384 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 794813 - 794872 2.2 766 276 Op 1 . - CDS 794890 - 795510 728 ## COG0491 Zn-dependent hydrolases, including glyoxylases 767 276 Op 2 9/0.008 - CDS 795526 - 797868 2745 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 768 276 Op 3 7/0.008 - CDS 797904 - 798428 596 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 798457 - 798516 7.3 769 277 Tu 1 3/0.052 - CDS 798518 - 800278 2112 ## COG0608 Single-stranded DNA-specific exonuclease - Term 800286 - 800329 10.8 770 278 Op 1 1/0.168 - CDS 800350 - 802515 2977 ## COG0342 Preprotein translocase subunit SecD 771 278 Op 2 . - CDS 802533 - 803939 1419 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 803957 - 803997 6.3 772 279 Op 1 . - CDS 804020 - 804163 171 ## - Prom 804186 - 804245 4.0 773 279 Op 2 . - CDS 804247 - 804621 565 ## Closa_0598 hypothetical protein 774 279 Op 3 . - CDS 804675 - 805223 740 ## COG2002 Regulators of stationary/sporulation gene expression - Prom 805281 - 805340 6.5 + Prom 805328 - 805387 9.5 775 280 Tu 1 . + CDS 805419 - 805865 264 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 + Term 805868 - 805909 12.7 - Term 805854 - 805899 16.0 776 281 Op 1 . - CDS 805946 - 806998 1317 ## Cphy_0113 hypothetical protein 777 281 Op 2 7/0.008 - CDS 807050 - 810391 3889 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 778 281 Op 3 . - CDS 810394 - 810978 756 ## COG0193 Peptidyl-tRNA hydrolase - Prom 811152 - 811211 5.7 + Prom 811003 - 811062 3.0 779 282 Tu 1 . + CDS 811150 - 811551 356 ## Closa_1014 hypothetical protein + Term 811655 - 811692 1.4 - Term 811510 - 811568 8.5 780 283 Op 1 . - CDS 811585 - 811848 356 ## EUBREC_1570 hypothetical protein 781 283 Op 2 . - CDS 811886 - 812533 742 ## COG0546 Predicted phosphatases - Prom 812629 - 812688 3.6 - Term 812612 - 812652 9.1 782 284 Tu 1 . - CDS 812694 - 813473 1031 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit - Prom 813547 - 813606 7.9 783 285 Op 1 . - CDS 813661 - 815271 1823 ## COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing 784 285 Op 2 . - CDS 815322 - 816062 789 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 785 285 Op 3 . - CDS 816075 - 816809 642 ## Cphy_2470 peptidase U4 sporulation factor SpoIIGA - Term 817168 - 817205 6.4 786 286 Tu 1 . - CDS 817233 - 818468 1216 ## COG0206 Cell division GTPase - Prom 818549 - 818608 12.4 - Term 818499 - 818551 -0.5 787 287 Op 1 . - CDS 818625 - 819401 1024 ## EUBREC_2248 hypothetical protein 788 287 Op 2 25/0.000 - CDS 819437 - 820519 1303 ## COG0772 Bacterial cell division membrane protein 789 287 Op 3 28/0.000 - CDS 820534 - 821883 1447 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 790 287 Op 4 4/0.036 - CDS 821893 - 822849 1221 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 791 287 Op 5 3/0.052 - CDS 822907 - 824631 2202 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 792 287 Op 6 . - CDS 824702 - 826540 2169 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 793 287 Op 7 . - CDS 826556 - 827092 451 ## Closa_2465 hypothetical protein 794 287 Op 8 29/0.000 - CDS 827112 - 828047 564 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 795 287 Op 9 . - CDS 828059 - 828499 316 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 828574 - 828633 6.5 - Term 828717 - 828773 13.0 796 288 Op 1 . - CDS 828796 - 829053 368 ## gi|225568667|ref|ZP_03777692.1| hypothetical protein CLOHYLEM_04745 797 288 Op 2 . - CDS 829113 - 829952 751 ## COG1307 Uncharacterized protein conserved in bacteria + Prom 829960 - 830019 5.0 798 289 Tu 1 . + CDS 830055 - 830180 117 ## - Term 830125 - 830163 -0.7 799 290 Tu 1 . - CDS 830321 - 831325 1162 ## COG0772 Bacterial cell division membrane protein - Prom 831347 - 831406 6.2 - Term 831395 - 831442 18.0 800 291 Tu 1 . - CDS 831452 - 832336 592 ## VCM66_A0418 hypothetical protein - Prom 832364 - 832423 11.1 + Prom 832302 - 832361 8.5 801 292 Tu 1 . + CDS 832470 - 832631 181 ## + Term 832670 - 832717 11.5 - Term 832658 - 832705 11.5 802 293 Op 1 11/0.004 - CDS 832714 - 833352 470 ## COG1180 Pyruvate-formate lyase-activating enzyme 803 293 Op 2 . - CDS 833420 - 835651 2502 ## COG1882 Pyruvate-formate lyase - Prom 835867 - 835926 8.0 - Term 835899 - 835956 18.4 804 294 Op 1 . - CDS 835968 - 836570 645 ## COG3546 Mn-containing catalase 805 294 Op 2 . - CDS 836574 - 836843 282 ## Clole_2722 hypothetical protein 806 294 Op 3 . - CDS 836840 - 837121 241 ## gi|225568677|ref|ZP_03777702.1| hypothetical protein CLOHYLEM_04755 807 295 Tu 1 . - CDS 837658 - 837738 120 ## - Prom 837808 - 837867 80.3 - Term 837753 - 837819 10.6 808 296 Tu 1 . - CDS 837869 - 838042 198 ## gi|225568678|ref|ZP_03777703.1| hypothetical protein CLOHYLEM_04756 - Prom 838084 - 838143 9.1 809 297 Op 1 . - CDS 838181 - 838372 347 ## Trebr_1860 Heavy metal transport/detoxification protein 810 297 Op 2 4/0.036 - CDS 838386 - 838688 405 ## COG1937 Uncharacterized protein conserved in bacteria 811 297 Op 3 . - CDS 838717 - 840990 2595 ## COG2217 Cation transport ATPase - Prom 841021 - 841080 6.1 - Term 841088 - 841141 18.0 812 298 Op 1 . - CDS 841151 - 842389 1339 ## COG0112 Glycine/serine hydroxymethyltransferase 813 298 Op 2 . - CDS 842448 - 843710 1467 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 843802 - 843861 3.0 - Term 843824 - 843874 10.0 814 299 Op 1 . - CDS 843901 - 845058 1434 ## COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 815 299 Op 2 . - CDS 845074 - 846840 1961 ## COG0018 Arginyl-tRNA synthetase - Prom 846974 - 847033 6.9 + Prom 846933 - 846992 8.1 816 300 Op 1 . + CDS 847028 - 847675 661 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 817 300 Op 2 . + CDS 847702 - 848622 907 ## COG0648 Endonuclease IV + Term 848639 - 848699 15.2 + Prom 848688 - 848747 6.5 818 301 Op 1 8/0.008 + CDS 848792 - 849160 346 ## COG1725 Predicted transcriptional regulators 819 301 Op 2 . + CDS 849162 - 849863 244 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 820 301 Op 3 . + CDS 849857 - 850681 796 ## ELI_0472 hypothetical protein + Term 850695 - 850741 -0.4 - Term 850683 - 850729 7.5 821 302 Op 1 8/0.008 - CDS 850771 - 851103 456 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) 822 302 Op 2 . - CDS 851094 - 851801 754 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Term 851826 - 851863 6.3 823 302 Op 3 . - CDS 851876 - 852520 747 ## gi|225568695|ref|ZP_03777720.1| hypothetical protein CLOHYLEM_04773 - Prom 852651 - 852710 6.3 - TRNA 852555 - 852626 70.3 # Arg CCG 0 0 824 303 Tu 1 . - CDS 852714 - 853181 527 ## ELI_3991 predicted membrane protein 825 304 Op 1 . - CDS 853283 - 853885 749 ## TDE2415 hypothetical protein 826 304 Op 2 . - CDS 853949 - 854824 922 ## EUBELI_01204 hypothetical protein - Prom 854980 - 855039 10.2 - Term 854982 - 855022 6.6 827 305 Op 1 . - CDS 855105 - 855662 684 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Term 855671 - 855697 -0.6 828 305 Op 2 . - CDS 855757 - 856257 583 ## COG2179 Predicted hydrolase of the HAD superfamily 829 305 Op 3 . - CDS 856257 - 857042 919 ## COG0703 Shikimate kinase 830 305 Op 4 . - CDS 857130 - 858020 1120 ## COG0583 Transcriptional regulator - Prom 858042 - 858101 5.4 + Prom 858077 - 858136 5.8 831 306 Tu 1 . + CDS 858181 - 860181 1872 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 860203 - 860262 22.0 - Term 860191 - 860250 22.0 832 307 Op 1 . - CDS 860287 - 862038 1897 ## COG0441 Threonyl-tRNA synthetase 833 307 Op 2 . - CDS 862428 - 863096 782 ## COG5632 N-acetylmuramoyl-L-alanine amidase - Prom 863116 - 863175 7.9 834 308 Op 1 . - CDS 863179 - 864207 427 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase 835 308 Op 2 . - CDS 864247 - 867291 2338 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 867320 - 867379 5.4 - Term 867363 - 867399 5.1 836 309 Tu 1 . - CDS 867419 - 868873 1705 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 868915 - 868974 6.7 837 310 Tu 1 . - CDS 868983 - 869471 699 ## Closa_1008 hypothetical protein - Prom 869496 - 869555 6.5 - Term 869516 - 869553 7.3 838 311 Op 1 41/0.000 - CDS 869585 - 871210 1571 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 839 311 Op 2 . - CDS 871259 - 871543 424 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 871583 - 871642 4.0 840 312 Tu 1 . - CDS 871655 - 871960 352 ## gi|225568713|ref|ZP_03777738.1| hypothetical protein CLOHYLEM_04792 - Term 871972 - 872006 4.0 841 313 Op 1 1/0.168 - CDS 872020 - 872802 1055 ## COG4465 Pleiotropic transcriptional repressor 842 313 Op 2 13/0.004 - CDS 872870 - 874948 1990 ## COG0550 Topoisomerase IA 843 313 Op 3 2/0.096 - CDS 874991 - 876079 1036 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 844 313 Op 4 . - CDS 876084 - 877622 1352 ## COG0606 Predicted ATPase with chaperone activity - Prom 877717 - 877776 7.5 845 314 Tu 1 . - CDS 877792 - 878409 548 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit - Prom 878612 - 878671 3.5 + Prom 878429 - 878488 3.3 846 315 Op 1 16/0.000 + CDS 878536 - 879804 1178 ## COG0642 Signal transduction histidine kinase 847 315 Op 2 . + CDS 879805 - 880662 874 ## COG0784 FOG: CheY-like receiver + Prom 880683 - 880742 7.9 848 316 Tu 1 . + CDS 880858 - 881907 1186 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 881941 - 881984 3.3 - Term 881932 - 881967 5.0 849 317 Tu 1 . - CDS 881991 - 883142 1506 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB - Prom 883194 - 883253 6.6 - Term 883238 - 883282 13.1 850 318 Op 1 4/0.036 - CDS 883292 - 884530 1223 ## COG0826 Collagenase and related proteases 851 318 Op 2 . - CDS 884514 - 885182 709 ## COG4122 Predicted O-methyltransferase - Term 885211 - 885267 8.7 852 319 Op 1 1/0.168 - CDS 885272 - 886939 1946 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 853 319 Op 2 . - CDS 886942 - 887421 186 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 854 319 Op 3 . - CDS 887428 - 887670 321 ## gi|225568727|ref|ZP_03777752.1| hypothetical protein CLOHYLEM_04806 855 319 Op 4 6/0.016 - CDS 887707 - 888138 513 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 856 319 Op 5 . - CDS 888144 - 888407 302 ## COG4472 Uncharacterized protein conserved in bacteria 857 319 Op 6 . - CDS 888465 - 889748 866 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 858 320 Tu 1 . + CDS 889946 - 890179 308 ## EUBREC_1899 hypothetical protein + Term 890203 - 890244 5.0 - Term 890188 - 890232 0.4 859 321 Tu 1 7/0.008 - CDS 890250 - 891431 1556 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Term 891452 - 891499 18.0 860 322 Op 1 . - CDS 891514 - 892674 1034 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 861 322 Op 2 9/0.008 - CDS 892718 - 893455 700 ## COG1385 Uncharacterized protein conserved in bacteria 862 322 Op 3 . - CDS 893457 - 894419 967 ## PROTEIN SUPPORTED gi|238917093|ref|YP_002930610.1| ribosomal protein L11 methyltransferase 863 322 Op 4 . - CDS 894430 - 894996 783 ## COG1971 Predicted membrane protein - Prom 895141 - 895200 5.3 - Term 895170 - 895216 11.0 864 323 Op 1 . - CDS 895349 - 896251 1028 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 865 323 Op 2 . - CDS 896264 - 898330 2147 ## COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain 866 323 Op 3 . - CDS 898402 - 899898 1911 ## COG0714 MoxR-like ATPases 867 323 Op 4 . - CDS 899895 - 901208 1067 ## Closa_4146 hypothetical protein 868 323 Op 5 . - CDS 901232 - 902218 750 ## Closa_4147 hypothetical protein 869 323 Op 6 . - CDS 902304 - 903119 780 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 870 323 Op 7 . - CDS 903190 - 903795 374 ## COG1434 Uncharacterized conserved protein 871 323 Op 8 . - CDS 903782 - 904573 850 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 904613 - 904672 6.4 + Prom 904670 - 904729 2.9 872 324 Tu 1 . + CDS 904753 - 905385 513 ## COG0586 Uncharacterized membrane-associated protein 873 325 Tu 1 . - CDS 905382 - 905975 753 ## COG1309 Transcriptional regulator - Prom 906091 - 906150 8.3 + Prom 906053 - 906112 8.1 874 326 Tu 1 . + CDS 906158 - 907165 603 ## COG0451 Nucleoside-diphosphate-sugar epimerases 875 327 Op 1 . - CDS 907107 - 908477 1128 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 876 327 Op 2 . - CDS 908493 - 911228 2769 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 911260 - 911319 3.6 877 328 Tu 1 . - CDS 911338 - 912471 1129 ## COG3858 Predicted glycosyl hydrolase - Term 912525 - 912579 13.0 878 329 Op 1 . - CDS 912607 - 913914 1106 ## COG1621 Beta-fructosidases (levanase/invertase) 879 329 Op 2 38/0.000 - CDS 913933 - 914793 994 ## COG0395 ABC-type sugar transport system, permease component 880 329 Op 3 35/0.000 - CDS 914793 - 915665 1085 ## COG1175 ABC-type sugar transport systems, permease components 881 329 Op 4 . - CDS 915682 - 917058 1739 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 917229 - 917288 7.8 + Prom 917212 - 917271 6.9 882 330 Tu 1 . + CDS 917325 - 918395 762 ## COG1609 Transcriptional regulators + Term 918403 - 918448 4.3 - Term 918335 - 918380 -0.9 883 331 Tu 1 . - CDS 918452 - 919033 535 ## Trebr_1792 helix-turn-helix domain protein - Prom 919058 - 919117 3.6 884 332 Op 1 10/0.008 - CDS 919148 - 922489 2745 ## COG0642 Signal transduction histidine kinase 885 332 Op 2 . - CDS 922507 - 924927 2410 ## COG0642 Signal transduction histidine kinase - Prom 924956 - 925015 3.3 - Term 924959 - 925002 2.5 886 333 Op 1 12/0.004 - CDS 925018 - 925758 291 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 887 333 Op 2 . - CDS 925768 - 927303 2018 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 888 333 Op 3 . - CDS 927307 - 927918 518 ## COG5015 Uncharacterized conserved protein 889 333 Op 4 . - CDS 927915 - 928775 879 ## COG0846 NAD-dependent protein deacetylases, SIR2 family - Prom 928931 - 928990 4.8 + Prom 928890 - 928949 5.7 890 334 Tu 1 . + CDS 928984 - 929313 280 ## COG1733 Predicted transcriptional regulators + Term 929451 - 929477 -0.6 - Term 929277 - 929336 17.0 891 335 Tu 1 . - CDS 929414 - 930013 434 ## COG1182 Acyl carrier protein phosphodiesterase - Prom 930132 - 930191 3.9 + Prom 930082 - 930141 10.8 892 336 Op 1 1/0.168 + CDS 930173 - 930559 365 ## COG3682 Predicted transcriptional regulator 893 336 Op 2 . + CDS 930561 - 932345 959 ## COG2602 Beta-lactamase class D + Prom 932373 - 932432 7.4 894 337 Op 1 . + CDS 932467 - 933024 552 ## Cphy_1856 TetR family transcriptional regulator + Term 933029 - 933061 1.5 895 337 Op 2 . + CDS 933097 - 933564 355 ## Cphy_1855 hypothetical protein 896 337 Op 3 . + CDS 933536 - 934216 719 ## Cphy_1854 hypothetical protein 897 337 Op 4 . + CDS 934213 - 934641 438 ## Cphy_1853 hypothetical protein + Term 934830 - 934884 3.0 898 338 Op 1 . - CDS 934652 - 935827 1310 ## Clole_2897 hypothetical protein 899 338 Op 2 . - CDS 935903 - 938008 2040 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Prom 938082 - 938141 7.1 + Prom 938046 - 938105 6.1 900 339 Op 1 . + CDS 938181 - 939272 933 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain + Prom 939275 - 939334 3.1 901 339 Op 2 33/0.000 + CDS 939359 - 940405 1101 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 902 339 Op 3 20/0.000 + CDS 940402 - 941394 878 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 903 339 Op 4 35/0.000 + CDS 941391 - 942428 764 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 904 339 Op 5 . + CDS 942425 - 943237 178 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 + Term 943402 - 943446 -1.0 - Term 943021 - 943056 -0.9 905 340 Op 1 . - CDS 943229 - 944245 913 ## COG2207 AraC-type DNA-binding domain-containing proteins 906 340 Op 2 2/0.096 - CDS 944226 - 945614 1438 ## COG0534 Na+-driven multidrug efflux pump - Prom 945638 - 945697 4.5 907 341 Op 1 . - CDS 945723 - 946283 554 ## COG1309 Transcriptional regulator - Prom 946311 - 946370 9.9 908 341 Op 2 . - CDS 946374 - 947375 874 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Prom 947426 - 947485 8.9 - Term 947482 - 947540 22.2 909 342 Op 1 . - CDS 947547 - 947906 520 ## Closa_2012 hypothetical protein - Prom 947934 - 947993 9.3 910 342 Op 2 . - CDS 948010 - 948084 96 ## 911 342 Op 3 . - CDS 948081 - 948710 406 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 912 342 Op 4 . - CDS 948715 - 949770 995 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis - Prom 949806 - 949865 3.9 - Term 949868 - 949908 3.4 913 343 Tu 1 . - CDS 949970 - 950257 318 ## gi|225568789|ref|ZP_03777814.1| hypothetical protein CLOHYLEM_04868 - Prom 950289 - 950348 6.5 + Prom 950409 - 950468 5.6 914 344 Tu 1 . + CDS 950489 - 950659 112 ## Ethha_1740 hypothetical protein + Term 950663 - 950707 7.7 + Prom 950727 - 950786 5.9 915 345 Tu 1 . + CDS 950826 - 951821 989 ## COG1533 DNA repair photolyase - Term 951954 - 951986 -0.8 916 346 Tu 1 . - CDS 952055 - 952477 453 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 952509 - 952568 4.1 - Term 952569 - 952614 5.8 917 347 Op 1 . - CDS 952678 - 953793 894 ## COG1408 Predicted phosphohydrolases 918 347 Op 2 . - CDS 953860 - 954378 212 ## LLKF_1361 GNAT family acetyltransferase (EC:2.3.1.-) 919 347 Op 3 . - CDS 954436 - 954990 509 ## COG0778 Nitroreductase 920 347 Op 4 . - CDS 955058 - 955594 372 ## BL02215 hypothetical protein - Prom 955681 - 955740 5.1 - Term 955725 - 955762 5.3 921 348 Op 1 . - CDS 955925 - 956704 191 ## gi|225568800|ref|ZP_03777825.1| hypothetical protein CLOHYLEM_04879 - Prom 956726 - 956785 2.0 922 348 Op 2 . - CDS 956819 - 957712 251 ## COG3177 Uncharacterized conserved protein - Prom 957732 - 957791 6.5 + Prom 958155 - 958214 6.2 923 349 Tu 1 . + CDS 958237 - 959799 1487 ## gi|225568803|ref|ZP_03777828.1| hypothetical protein CLOHYLEM_04882 + Term 959912 - 959954 6.1 - Term 959899 - 959942 10.1 924 350 Tu 1 . - CDS 960057 - 960344 85 ## gi|225568805|ref|ZP_03777830.1| hypothetical protein CLOHYLEM_04884 - Prom 960462 - 960521 4.3 925 351 Tu 1 . - CDS 960629 - 961000 254 ## BDI_2962 hypothetical protein - Prom 961215 - 961274 3.6 - Term 961075 - 961116 -0.9 926 352 Tu 1 . - CDS 961346 - 961483 147 ## gi|197302050|ref|ZP_03167111.1| hypothetical protein RUMLAC_00778 - Prom 961572 - 961631 3.5 927 353 Op 1 . - CDS 961647 - 961757 168 ## 928 353 Op 2 . - CDS 961847 - 961942 92 ## 929 353 Op 3 . - CDS 961953 - 963335 1614 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 930 353 Op 4 . - CDS 963361 - 964302 1149 ## COG1432 Uncharacterized conserved protein - Prom 964347 - 964406 2.7 - Term 964369 - 964418 1.9 931 354 Tu 1 . - CDS 964445 - 964687 389 ## gi|331091396|ref|ZP_08340235.1| hypothetical protein HMPREF9477_00878 - Prom 964732 - 964791 7.7 932 355 Op 1 . - CDS 964802 - 967033 2851 ## COG0210 Superfamily I DNA and RNA helicases 933 355 Op 2 . - CDS 967030 - 967422 497 ## CLJU_c14440 hypothetical protein - Prom 967448 - 967507 4.6 + Prom 967356 - 967415 3.3 934 356 Tu 1 . + CDS 967598 - 968884 1184 ## COG0726 Predicted xylanase/chitin deacetylase - Term 968788 - 968836 0.7 935 357 Tu 1 . - CDS 968849 - 970264 1658 ## COG0534 Na+-driven multidrug efflux pump - Prom 970405 - 970464 8.6 - Term 970309 - 970351 -0.2 936 358 Op 1 . - CDS 970481 - 971437 1000 ## COG1073 Hydrolases of the alpha/beta superfamily 937 358 Op 2 1/0.168 - CDS 971421 - 972065 711 ## COG1309 Transcriptional regulator 938 358 Op 3 . - CDS 972076 - 973158 751 ## COG0535 Predicted Fe-S oxidoreductases 939 358 Op 4 . - CDS 973250 - 973570 297 ## Closa_2289 hypothetical protein 940 358 Op 5 1/0.168 - CDS 973582 - 974850 1301 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 974870 - 974929 4.3 941 358 Op 6 . - CDS 974938 - 975516 592 ## COG2135 Uncharacterized conserved protein - Prom 975609 - 975668 4.9 + Prom 975565 - 975624 4.8 942 359 Tu 1 . + CDS 975644 - 976255 608 ## EUBREC_1394 hypothetical protein - Term 976236 - 976273 6.1 943 360 Op 1 . - CDS 976277 - 976570 354 ## COG4496 Uncharacterized protein conserved in bacteria 944 360 Op 2 . - CDS 976635 - 977375 883 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family - Prom 977531 - 977590 6.0 + Prom 977409 - 977468 3.8 945 361 Op 1 . + CDS 977585 - 977800 310 ## gi|225568827|ref|ZP_03777852.1| hypothetical protein CLOHYLEM_04906 946 361 Op 2 . + CDS 977837 - 978313 551 ## BcerKBAB4_5499 hypothetical protein 947 361 Op 3 . + CDS 978387 - 979382 1071 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 979400 - 979450 20.6 + Prom 979431 - 979490 3.3 948 362 Op 1 40/0.000 + CDS 979530 - 980225 703 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 949 362 Op 2 . + CDS 980215 - 981357 885 ## COG0642 Signal transduction histidine kinase + Prom 981387 - 981446 6.4 950 363 Op 1 . + CDS 981630 - 982490 695 ## COG1686 D-alanyl-D-alanine carboxypeptidase 951 363 Op 2 . + CDS 982544 - 983590 1242 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Term 983806 - 983841 0.9 952 364 Tu 1 . - CDS 984837 - 987533 2363 ## COG0480 Translation elongation factors (GTPases) - Prom 987570 - 987629 9.5 + Prom 987583 - 987642 5.7 953 365 Tu 1 . + CDS 987684 - 990908 3758 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 990912 - 990963 10.2 - Term 990900 - 990950 17.6 954 366 Op 1 . - CDS 990956 - 992818 1597 ## COG0366 Glycosidases 955 366 Op 2 . - CDS 992836 - 995016 1958 ## COG3345 Alpha-galactosidase - Prom 995164 - 995223 6.8 + Prom 994985 - 995044 5.3 956 367 Tu 1 . + CDS 995174 - 996073 748 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 995909 - 995945 -1.0 957 368 Op 1 . - CDS 996101 - 996928 847 ## COG0789 Predicted transcriptional regulators 958 368 Op 2 . - CDS 996961 - 997110 69 ## - Prom 997351 - 997410 2.2 + Prom 996910 - 996969 6.1 959 369 Tu 1 . + CDS 997043 - 998371 1176 ## COG0534 Na+-driven multidrug efflux pump + Term 998375 - 998434 5.1 - Term 998372 - 998413 7.6 960 370 Op 1 . - CDS 998417 - 999562 1479 ## COG0628 Predicted permease 961 370 Op 2 4/0.036 - CDS 999566 - 1000168 731 ## COG0218 Predicted GTPase 962 370 Op 3 18/0.000 - CDS 1000197 - 1002530 2571 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 1002558 - 1002617 3.7 - Term 1002595 - 1002634 6.6 963 371 Op 1 24/0.000 - CDS 1002641 - 1003900 280 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 964 371 Op 2 29/0.000 - CDS 1003933 - 1004514 639 ## COG0740 Protease subunit of ATP-dependent Clp proteases 965 371 Op 3 . - CDS 1004547 - 1005833 1655 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 966 372 Op 1 . - CDS 1005938 - 1006612 922 ## gi|225568851|ref|ZP_03777876.1| hypothetical protein CLOHYLEM_04930 967 372 Op 2 . - CDS 1006632 - 1007180 805 ## COG0693 Putative intracellular protease/amidase - Prom 1007304 - 1007363 9.8 + Prom 1007263 - 1007322 4.8 968 373 Tu 1 . + CDS 1007345 - 1007788 492 ## COG2954 Uncharacterized protein conserved in bacteria + Prom 1007813 - 1007872 3.4 969 374 Tu 1 . + CDS 1007899 - 1008315 379 ## Ccel_1565 XRE family transcriptional regulator + Term 1008387 - 1008423 -1.0 - Term 1008230 - 1008271 -0.7 970 375 Op 1 . - CDS 1008312 - 1009520 1439 ## COG0527 Aspartokinases 971 375 Op 2 1/0.168 - CDS 1009543 - 1010754 1262 ## COG3635 Predicted phosphoglycerate mutase, AP superfamily 972 375 Op 3 . - CDS 1010773 - 1011993 1484 ## COG0460 Homoserine dehydrogenase 973 375 Op 4 . - CDS 1012006 - 1012944 959 ## COG1186 Protein chain release factor B 974 375 Op 5 . - CDS 1013036 - 1013113 137 ## 975 375 Op 6 . - CDS 1013134 - 1015698 3033 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 1015734 - 1015793 4.7 976 376 Op 1 . - CDS 1015808 - 1016527 909 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 977 376 Op 2 1/0.168 - CDS 1016588 - 1017820 1432 ## COG1541 Coenzyme F390 synthetase 978 376 Op 3 11/0.004 - CDS 1017866 - 1018450 654 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 979 376 Op 4 . - CDS 1018452 - 1020257 1795 ## COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits - Prom 1020311 - 1020370 6.9 - Term 1020356 - 1020397 3.1 980 377 Tu 1 . - CDS 1020457 - 1020810 552 ## gi|225568864|ref|ZP_03777889.1| hypothetical protein CLOHYLEM_04943 - Prom 1020831 - 1020890 2.8 981 378 Op 1 . - CDS 1020917 - 1022869 2115 ## COG3855 Uncharacterized protein conserved in bacteria 982 378 Op 2 6/0.016 - CDS 1022892 - 1023650 942 ## COG0289 Dihydrodipicolinate reductase - Prom 1023706 - 1023765 10.5 - Term 1023703 - 1023771 5.9 983 379 Tu 1 . - CDS 1023789 - 1024682 927 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 1024724 - 1024783 9.1 984 380 Op 1 . - CDS 1024789 - 1025418 772 ## COG0629 Single-stranded DNA-binding protein - Prom 1025442 - 1025501 3.5 985 380 Op 2 . - CDS 1025503 - 1026240 740 ## COG2043 Uncharacterized protein conserved in archaea 986 380 Op 3 34/0.000 - CDS 1026255 - 1027061 913 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 987 380 Op 4 4/0.036 - CDS 1027064 - 1028854 1806 ## COG1122 ABC-type cobalt transport system, ATPase component 988 380 Op 5 . - CDS 1028860 - 1029420 797 ## COG4721 Predicted membrane protein - Prom 1029582 - 1029641 9.3 + Prom 1029523 - 1029582 7.8 989 381 Op 1 . + CDS 1029631 - 1031454 2383 ## COG1217 Predicted membrane GTPase involved in stress response 990 381 Op 2 . + CDS 1031454 - 1032347 747 ## COG0671 Membrane-associated phospholipid phosphatase 991 382 Op 1 . + CDS 1032478 - 1033089 633 ## EUBREC_1210 hypothetical protein + Prom 1033101 - 1033160 4.6 992 382 Op 2 . + CDS 1033193 - 1033729 487 ## PROTEIN SUPPORTED gi|28210085|ref|NP_781029.1| SSU ribosomal protein S30P + Term 1033766 - 1033829 28.5 - Term 1033762 - 1033810 19.5 993 383 Tu 1 . - CDS 1033820 - 1034476 643 ## COG1739 Uncharacterized conserved protein - Prom 1034631 - 1034690 10.1 + Prom 1034551 - 1034610 6.5 994 384 Tu 1 . + CDS 1034631 - 1037165 2559 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 1037213 - 1037261 10.3 - Term 1037201 - 1037247 9.0 995 385 Op 1 . - CDS 1037271 - 1038203 650 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 996 385 Op 2 . - CDS 1038218 - 1039144 949 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 997 385 Op 3 . - CDS 1039224 - 1041062 1857 ## COG0322 Nuclease subunit of the excinuclease complex 998 386 Tu 1 . - CDS 1041185 - 1042861 1682 ## COG0366 Glycosidases - Prom 1042914 - 1042973 6.5 + Prom 1042963 - 1043022 4.9 999 387 Tu 1 . + CDS 1043048 - 1044067 776 ## COG1609 Transcriptional regulators + Term 1044078 - 1044140 16.1 - Term 1044065 - 1044126 12.1 1000 388 Tu 1 . - CDS 1044135 - 1046126 1252 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Prom 1046146 - 1046205 9.8 + Prom 1046177 - 1046236 7.3 1001 389 Op 1 . + CDS 1046294 - 1047787 1424 ## COG4868 Uncharacterized protein conserved in bacteria + Prom 1047796 - 1047855 6.3 1002 389 Op 2 . + CDS 1047889 - 1049499 1550 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 1049507 - 1049555 19.4 - Term 1049488 - 1049549 28.1 1003 390 Op 1 . - CDS 1049551 - 1050231 668 ## COG3619 Predicted membrane protein 1004 390 Op 2 28/0.000 - CDS 1050250 - 1053411 3022 ## COG0419 ATPase involved in DNA repair 1005 390 Op 3 . - CDS 1053408 - 1054577 1033 ## COG0420 DNA repair exonuclease 1006 390 Op 4 . - CDS 1054594 - 1055379 851 ## COG0345 Pyrroline-5-carboxylate reductase 1007 390 Op 5 . - CDS 1055418 - 1056020 642 ## COG1357 Uncharacterized low-complexity proteins 1008 390 Op 6 . - CDS 1056114 - 1056656 528 ## COG4422 Bacteriophage protein gp37 1009 391 Op 1 . - CDS 1056862 - 1057590 757 ## Cbei_3432 hypothetical protein 1010 391 Op 2 . - CDS 1057574 - 1058377 766 ## COG1131 ABC-type multidrug transport system, ATPase component 1011 391 Op 3 . - CDS 1058404 - 1059075 451 ## Clole_3070 hypothetical protein 1012 391 Op 4 . - CDS 1059114 - 1059317 211 ## gi|225568897|ref|ZP_03777922.1| hypothetical protein CLOHYLEM_04976 1013 391 Op 5 . - CDS 1059375 - 1059464 195 ## - Prom 1059506 - 1059565 3.7 - Term 1059542 - 1059586 7.5 1014 392 Tu 1 . - CDS 1059623 - 1062046 2966 ## COG0495 Leucyl-tRNA synthetase - Prom 1062156 - 1062215 6.9 + Prom 1062115 - 1062174 6.9 1015 393 Op 1 . + CDS 1062218 - 1062640 517 ## FMG_1524 hypothetical protein + Term 1062643 - 1062679 2.2 + Prom 1062664 - 1062723 3.5 1016 393 Op 2 . + CDS 1062748 - 1063920 1006 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) + Term 1063922 - 1063986 28.0 - Term 1063905 - 1063977 31.2 1017 394 Op 1 . - CDS 1063985 - 1064899 1037 ## COG0679 Predicted permeases 1018 394 Op 2 . - CDS 1064917 - 1066548 1931 ## Ccur_02400 hypothetical protein 1019 394 Op 3 17/0.000 - CDS 1066577 - 1068010 1451 ## COG0168 Trk-type K+ transport systems, membrane components 1020 394 Op 4 . - CDS 1068041 - 1069399 1664 ## COG0569 K+ transport systems, NAD-binding component - Prom 1069444 - 1069503 8.3 - Term 1069461 - 1069493 -1.0 1021 395 Tu 1 . - CDS 1069505 - 1071583 2446 ## COG0480 Translation elongation factors (GTPases) - Prom 1071617 - 1071676 7.5 + Prom 1071560 - 1071619 5.9 1022 396 Op 1 6/0.016 + CDS 1071818 - 1072912 1176 ## COG0287 Prephenate dehydrogenase 1023 396 Op 2 . + CDS 1072902 - 1074200 927 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Term 1074273 - 1074299 -0.6 - Term 1074241 - 1074287 2.1 1024 397 Op 1 . - CDS 1074301 - 1075485 1147 ## Nther_1024 hypothetical protein 1025 397 Op 2 . - CDS 1075489 - 1076010 443 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 1076045 - 1076104 3.1 - Term 1076039 - 1076100 4.8 1026 398 Op 1 . - CDS 1076112 - 1077284 1483 ## Cphy_0091 protein serine/threonine phosphatase 1027 398 Op 2 1/0.168 - CDS 1077286 - 1078896 1941 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 1028 399 Tu 1 . - CDS 1078998 - 1079243 284 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit - Prom 1079293 - 1079352 2.6 1029 400 Op 1 . - CDS 1079356 - 1079595 336 ## ELI_2272 ribonuclease barnase inhibitor barstar 1030 400 Op 2 . - CDS 1079608 - 1080102 566 ## ELI_2271 S-layer-like domain-containing protein - Prom 1080133 - 1080192 6.4 + Prom 1080175 - 1080234 5.7 1031 401 Op 1 . + CDS 1080269 - 1081606 1482 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 1032 401 Op 2 . + CDS 1081673 - 1081780 60 ## + Term 1081859 - 1081898 -0.0 + Prom 1081896 - 1081955 3.4 1033 402 Tu 1 . + CDS 1081975 - 1083348 1529 ## COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) + Term 1083379 - 1083422 10.0 - Term 1083367 - 1083410 13.8 1034 403 Op 1 . - CDS 1083432 - 1084160 547 ## COG1876 D-alanyl-D-alanine carboxypeptidase 1035 403 Op 2 . - CDS 1084259 - 1085056 831 ## gi|225568922|ref|ZP_03777947.1| hypothetical protein CLOHYLEM_05001 1036 403 Op 3 40/0.000 - CDS 1085053 - 1086483 1380 ## COG0642 Signal transduction histidine kinase 1037 403 Op 4 . - CDS 1086487 - 1087140 659 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1087179 - 1087238 5.0 1038 404 Op 1 . - CDS 1087249 - 1087947 779 ## Cphy_3597 ABC-2 type transporter 1039 404 Op 2 . - CDS 1087951 - 1088796 828 ## COG1131 ABC-type multidrug transport system, ATPase component 1040 404 Op 3 . - CDS 1088774 - 1089274 420 ## Ccur_00250 hypothetical protein 1041 404 Op 4 . - CDS 1089277 - 1089714 621 ## COG3279 Response regulator of the LytR/AlgR family - Prom 1089736 - 1089795 5.0 - Term 1089818 - 1089869 14.2 1042 405 Op 1 36/0.000 - CDS 1089918 - 1092407 2258 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 1043 405 Op 2 4/0.036 - CDS 1092400 - 1093089 218 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 - Prom 1093112 - 1093171 3.0 - Term 1093144 - 1093183 6.1 1044 406 Op 1 40/0.000 - CDS 1093196 - 1094122 929 ## COG0642 Signal transduction histidine kinase 1045 406 Op 2 1/0.168 - CDS 1094110 - 1094778 621 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1094803 - 1094862 6.8 1046 407 Tu 1 . - CDS 1094908 - 1095666 664 ## COG0789 Predicted transcriptional regulators - Prom 1095687 - 1095746 2.3 - Term 1095752 - 1095791 9.3 1047 408 Op 1 . - CDS 1095812 - 1097350 1702 ## COG0661 Predicted unusual protein kinase 1048 408 Op 2 . - CDS 1097391 - 1097768 634 ## EUBREC_0665 hypothetical protein 1049 408 Op 3 . - CDS 1097761 - 1098108 226 ## COG2315 Uncharacterized protein conserved in bacteria 1050 408 Op 4 . - CDS 1098125 - 1099162 1127 ## COG0818 Diacylglycerol kinase - Prom 1099192 - 1099251 6.6 1051 408 Op 5 . - CDS 1099253 - 1100119 947 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 1100306 - 1100365 13.3 + Prom 1099770 - 1099829 4.0 1052 409 Tu 1 . + CDS 1100037 - 1100195 87 ## + Prom 1100305 - 1100364 12.9 1053 410 Op 1 11/0.004 + CDS 1100432 - 1101283 504 ## COG1180 Pyruvate-formate lyase-activating enzyme 1054 410 Op 2 . + CDS 1101296 - 1103359 1286 ## COG1882 Pyruvate-formate lyase + Prom 1103361 - 1103420 7.1 1055 411 Tu 1 . + CDS 1103442 - 1104329 791 ## COG1737 Transcriptional regulators + Term 1104380 - 1104418 2.1 - Term 1104349 - 1104417 11.5 1056 412 Op 1 . - CDS 1104420 - 1105358 1071 ## COG4989 Predicted oxidoreductase 1057 412 Op 2 38/0.000 - CDS 1105392 - 1106222 882 ## COG0395 ABC-type sugar transport system, permease component 1058 412 Op 3 35/0.000 - CDS 1106238 - 1107161 709 ## COG1175 ABC-type sugar transport systems, permease components - Term 1107212 - 1107254 14.0 1059 412 Op 4 . - CDS 1107274 - 1108575 1531 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 1108799 - 1108858 13.6 + Prom 1108636 - 1108695 8.3 1060 413 Tu 1 . + CDS 1108944 - 1110191 795 ## Spirs_3399 hypothetical protein + Term 1110197 - 1110236 4.3 - Term 1110181 - 1110228 14.0 1061 414 Op 1 . - CDS 1110233 - 1111063 628 ## Halsa_0172 xylose isomerase domain-containing protein TIM barrel 1062 414 Op 2 . - CDS 1111060 - 1112034 868 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 1063 414 Op 3 . - CDS 1112054 - 1112260 222 ## ABC3607 dihydrodipicolinate synthase (EC:4.2.1.52) - Term 1112318 - 1112343 -0.1 1064 415 Op 1 . - CDS 1112383 - 1113408 692 ## CPF_0647 hypothetical protein 1065 415 Op 2 . - CDS 1113419 - 1114324 604 ## Tpen_0839 xylose isomerase domain-containing protein 1066 415 Op 3 . - CDS 1114321 - 1114746 299 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 1067 415 Op 4 . - CDS 1114743 - 1116269 1272 ## COG3333 Uncharacterized protein conserved in bacteria 1068 415 Op 5 . - CDS 1116287 - 1116742 570 ## Spirs_0776 hypothetical protein 1069 415 Op 6 . - CDS 1116828 - 1117838 1160 ## COG3181 Uncharacterized protein conserved in bacteria 1070 415 Op 7 . - CDS 1117868 - 1118632 221 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 1118689 - 1118748 7.5 + Prom 1118653 - 1118712 9.4 1071 416 Op 1 13/0.004 + CDS 1118859 - 1119863 774 ## COG1609 Transcriptional regulators 1072 416 Op 2 . + CDS 1119857 - 1120783 862 ## COG0524 Sugar kinases, ribokinase family 1073 417 Tu 1 . - CDS 1120793 - 1121347 502 ## COG3760 Uncharacterized conserved protein - Prom 1121394 - 1121453 10.1 + Prom 1121423 - 1121482 4.0 1074 418 Tu 1 . + CDS 1121541 - 1121876 281 ## gi|225568961|ref|ZP_03777986.1| hypothetical protein CLOHYLEM_05040 1075 419 Tu 1 . - CDS 1121857 - 1122708 600 ## COG0789 Predicted transcriptional regulators - Prom 1122751 - 1122810 6.5 + Prom 1122798 - 1122857 4.5 1076 420 Tu 1 . + CDS 1122933 - 1123814 879 ## COG0789 Predicted transcriptional regulators + Term 1123980 - 1124022 -1.0 1077 421 Op 1 . - CDS 1123826 - 1124590 668 ## EF1959 hypothetical protein 1078 421 Op 2 . - CDS 1124571 - 1126403 920 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 1126423 - 1126482 6.7 - Term 1126472 - 1126509 -0.9 1079 422 Op 1 . - CDS 1126522 - 1127523 1064 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 1080 422 Op 2 . - CDS 1127551 - 1127739 201 ## gi|225568968|ref|ZP_03777993.1| hypothetical protein CLOHYLEM_05047 1081 422 Op 3 . - CDS 1127736 - 1128482 453 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 1128545 - 1128604 12.6 + Prom 1128498 - 1128557 8.7 1082 423 Op 1 . + CDS 1128716 - 1129405 745 ## COG1335 Amidases related to nicotinamidase 1083 423 Op 2 . + CDS 1129418 - 1130785 1280 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 1130805 - 1130853 18.5 - Term 1130795 - 1130839 16.0 1084 424 Op 1 7/0.008 - CDS 1130866 - 1133118 2552 ## COG0058 Glucan phosphorylase 1085 424 Op 2 . - CDS 1133123 - 1134562 1364 ## COG1640 4-alpha-glucanotransferase 1086 425 Op 1 38/0.000 - CDS 1134676 - 1135515 914 ## COG0395 ABC-type sugar transport system, permease component 1087 425 Op 2 35/0.000 - CDS 1135515 - 1136357 890 ## COG1175 ABC-type sugar transport systems, permease components - Term 1136368 - 1136408 5.9 1088 425 Op 3 2/0.096 - CDS 1136430 - 1137728 1597 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 1137760 - 1137819 5.2 - Term 1137809 - 1137855 2.7 1089 426 Op 1 1/0.168 - CDS 1137856 - 1139136 1205 ## COG1653 ABC-type sugar transport system, periplasmic component 1090 426 Op 2 7/0.008 - CDS 1139126 - 1140901 1915 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 1091 426 Op 3 . - CDS 1140898 - 1142487 1782 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 1142540 - 1142599 4.1 - Term 1142621 - 1142654 7.5 1092 427 Op 1 . - CDS 1142677 - 1143543 605 ## COG1284 Uncharacterized conserved protein 1093 427 Op 2 . - CDS 1143530 - 1145197 995 ## COG1292 Choline-glycine betaine transporter 1094 427 Op 3 . - CDS 1145163 - 1145600 269 ## gi|225568982|ref|ZP_03778007.1| hypothetical protein CLOHYLEM_05061 - Prom 1145654 - 1145713 3.5 1095 428 Op 1 2/0.096 - CDS 1145734 - 1147179 1187 ## COG1070 Sugar (pentulose and hexulose) kinases 1096 428 Op 2 . - CDS 1147255 - 1148031 682 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1097 428 Op 3 29/0.000 - CDS 1148050 - 1148988 737 ## COG2025 Electron transfer flavoprotein, alpha subunit 1098 428 Op 4 3/0.052 - CDS 1148978 - 1149790 487 ## COG2086 Electron transfer flavoprotein, beta subunit 1099 428 Op 5 5/0.024 - CDS 1149795 - 1150982 799 ## COG0477 Permeases of the major facilitator superfamily 1100 428 Op 6 . - CDS 1151078 - 1152547 842 ## COG0277 FAD/FMN-containing dehydrogenases + Prom 1152573 - 1152632 7.0 1101 429 Tu 1 . + CDS 1152793 - 1153524 309 ## COG1737 Transcriptional regulators - Term 1153388 - 1153441 -0.2 1102 430 Tu 1 . - CDS 1153541 - 1154125 486 ## COG1309 Transcriptional regulator - Prom 1154242 - 1154301 8.3 + Prom 1154193 - 1154252 8.8 1103 431 Op 1 10/0.008 + CDS 1154299 - 1155066 758 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1104 431 Op 2 . + CDS 1155117 - 1155890 906 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 1155942 - 1155998 14.3 - Term 1155928 - 1155986 14.7 1105 432 Tu 1 . - CDS 1156160 - 1156534 273 ## CLM_1089 hypothetical protein - Prom 1156754 - 1156813 6.2 1106 433 Tu 1 . - CDS 1156957 - 1157469 181 ## PROTEIN SUPPORTED gi|116511598|ref|YP_808814.1| acetyltransferase - Prom 1157702 - 1157761 3.3 + Prom 1158806 - 1158865 2.0 1107 434 Tu 1 . + CDS 1158916 - 1159107 218 ## 1108 435 Tu 1 . + CDS 1159454 - 1159651 283 ## gi|225568999|ref|ZP_03778024.1| hypothetical protein CLOHYLEM_05078 1109 436 Op 1 13/0.004 - CDS 1159942 - 1160232 178 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 1110 436 Op 2 12/0.004 - CDS 1160241 - 1161260 637 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 1111 436 Op 3 2/0.096 - CDS 1161274 - 1161933 286 ## COG1468 RecB family exonuclease 1112 436 Op 4 . - CDS 1161926 - 1162786 641 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair 1113 436 Op 5 . - CDS 1162788 - 1164752 1282 ## Dtox_3649 CRISPR-associated protein, Csd1 family 1114 436 Op 6 . - CDS 1164736 - 1165485 569 ## Rumal_1130 Cas5 family CRISPR-associated protein 1115 436 Op 7 . - CDS 1165500 - 1167917 972 ## COG1203 Predicted helicases - Prom 1168027 - 1168086 13.0 - Term 1167937 - 1167974 6.4 1116 437 Op 1 . - CDS 1168131 - 1168802 476 ## Closa_0515 hypothetical protein 1117 437 Op 2 2/0.096 - CDS 1168811 - 1169791 1136 ## COG2222 Predicted phosphosugar isomerases 1118 437 Op 3 1/0.168 - CDS 1169803 - 1170639 663 ## COG1082 Sugar phosphate isomerases/epimerases 1119 437 Op 4 38/0.000 - CDS 1170649 - 1171470 924 ## COG0395 ABC-type sugar transport system, permease component 1120 437 Op 5 35/0.000 - CDS 1171482 - 1172363 898 ## COG1175 ABC-type sugar transport systems, permease components 1121 437 Op 6 2/0.096 - CDS 1172420 - 1173115 648 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 1173175 - 1173234 80.4 1122 438 Op 1 1/0.168 - CDS 1173247 - 1173783 561 ## COG1653 ABC-type sugar transport system, periplasmic component 1123 438 Op 2 1/0.168 - CDS 1173813 - 1174700 754 ## COG0524 Sugar kinases, ribokinase family - Prom 1174743 - 1174802 11.6 - Term 1174831 - 1174866 3.5 1124 439 Op 1 . - CDS 1174897 - 1175625 845 ## COG2188 Transcriptional regulators - Prom 1175646 - 1175705 2.9 1125 439 Op 2 . - CDS 1175713 - 1176189 110 ## Mlab_1736 hypothetical protein - Prom 1176217 - 1176276 4.8 1126 440 Tu 1 . - CDS 1176426 - 1176998 282 ## Ethha_1033 regulatory protein TetR - Prom 1177024 - 1177083 5.7 1127 441 Op 1 . - CDS 1177182 - 1177631 100 ## Shel_17470 hypothetical protein 1128 441 Op 2 . - CDS 1177649 - 1177855 90 ## Closa_1763 GCN5-related N-acetyltransferase - Prom 1177925 - 1177984 2.6 1129 442 Op 1 . - CDS 1178072 - 1178605 161 ## bpr_I0658 hypothetical protein 1130 442 Op 2 . - CDS 1178583 - 1179176 248 ## COG1309 Transcriptional regulator - Prom 1179214 - 1179273 8.9 1131 443 Tu 1 . + CDS 1179503 - 1179961 94 ## Rumal_1830 GCN5-like N-acetyltransferase + Prom 1180008 - 1180067 6.6 1132 444 Tu 1 . + CDS 1180101 - 1180178 61 ## - Term 1180157 - 1180204 10.5 1133 445 Op 1 . - CDS 1180345 - 1181637 1462 ## COG0519 GMP synthase, PP-ATPase domain/subunit 1134 445 Op 2 . - CDS 1181702 - 1182898 1311 ## Cphy_2845 hypothetical protein 1135 445 Op 3 . - CDS 1182978 - 1183931 930 ## COG1396 Predicted transcriptional regulators - Prom 1183956 - 1184015 2.3 1136 446 Tu 1 . - CDS 1184079 - 1184726 789 ## COG0546 Predicted phosphatases - Prom 1184852 - 1184911 9.3 + Prom 1184787 - 1184846 7.5 1137 447 Tu 1 . + CDS 1184923 - 1186218 479 ## gi|225569028|ref|ZP_03778053.1| hypothetical protein CLOHYLEM_05107 - Term 1186091 - 1186134 -0.6 1138 448 Tu 1 . - CDS 1186243 - 1187346 1413 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 1187388 - 1187447 6.1 - Term 1187440 - 1187482 8.5 1139 449 Op 1 1/0.168 - CDS 1187503 - 1189245 1712 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 1140 449 Op 2 1/0.168 - CDS 1189261 - 1191048 1909 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 1141 449 Op 3 . - CDS 1191068 - 1191442 397 ## COG3411 Ferredoxin 1142 449 Op 4 . - CDS 1191465 - 1192022 567 ## COG0642 Signal transduction histidine kinase 1143 449 Op 5 . - CDS 1192025 - 1192519 630 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit - Prom 1192574 - 1192633 7.2 + Prom 1192705 - 1192764 7.7 1144 450 Op 1 . + CDS 1192794 - 1193138 245 ## Closa_3389 DRTGG domain protein 1145 450 Op 2 . + CDS 1193142 - 1193564 514 ## COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) 1146 450 Op 3 . + CDS 1193586 - 1194968 1223 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 1147 450 Op 4 . + CDS 1194971 - 1195300 492 ## Closa_3386 hypothetical protein 1148 450 Op 5 . + CDS 1195297 - 1196073 415 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 1149 451 Op 1 16/0.000 - CDS 1196277 - 1196969 905 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1150 451 Op 2 . - CDS 1196966 - 1198384 1640 ## COG2205 Osmosensitive K+ channel histidine kinase 1151 451 Op 3 17/0.000 - CDS 1198411 - 1199064 813 ## COG0569 K+ transport systems, NAD-binding component 1152 451 Op 4 . - CDS 1199081 - 1200421 1495 ## COG0168 Trk-type K+ transport systems, membrane components 1153 451 Op 5 . - CDS 1200418 - 1200891 516 ## Clos_0857 hypothetical protein - Prom 1200913 - 1200972 3.3 1154 452 Op 1 . - CDS 1201005 - 1201457 501 ## COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 1155 452 Op 2 . - CDS 1201483 - 1202127 754 ## COG2082 Precorrin isomerase 1156 452 Op 3 . - CDS 1202127 - 1203110 866 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 1157 452 Op 4 . - CDS 1203138 - 1204760 1631 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 1158 452 Op 5 13/0.004 - CDS 1204772 - 1206604 826 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 1159 452 Op 6 49/0.000 - CDS 1206612 - 1207433 924 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1160 452 Op 7 . - CDS 1207430 - 1208350 1031 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1161 452 Op 8 6/0.016 - CDS 1208384 - 1209925 1353 ## COG0007 Uroporphyrinogen-III methylase 1162 452 Op 9 . - CDS 1209909 - 1210805 523 ## COG0181 Porphobilinogen deaminase 1163 452 Op 10 2/0.096 - CDS 1210793 - 1212319 1575 ## COG1492 Cobyric acid synthase 1164 452 Op 11 9/0.008 - CDS 1212335 - 1213468 866 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 1165 452 Op 12 . - CDS 1213470 - 1214423 945 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 1166 452 Op 13 6/0.016 - CDS 1214432 - 1214980 499 ## COG0406 Fructose-2,6-bisphosphatase 1167 452 Op 14 11/0.004 - CDS 1215036 - 1215797 760 ## COG0368 Cobalamin-5-phosphate synthase 1168 452 Op 15 2/0.096 - CDS 1215808 - 1216899 1240 ## COG2038 NaMN:DMB phosphoribosyltransferase 1169 452 Op 16 . - CDS 1216901 - 1218292 1216 ## COG1797 Cobyrinic acid a,c-diamide synthase 1170 452 Op 17 . - CDS 1218292 - 1219524 1152 ## COG2242 Precorrin-6B methylase 2 1171 452 Op 18 2/0.096 - CDS 1219517 - 1220248 666 ## COG1010 Precorrin-3B methylase 1172 452 Op 19 9/0.008 - CDS 1220241 - 1221014 935 ## COG2875 Precorrin-4 methylase 1173 452 Op 20 1/0.168 - CDS 1221020 - 1221757 821 ## COG2243 Precorrin-2 methylase 1174 452 Op 21 . - CDS 1221758 - 1222912 1074 ## COG1903 Cobalamin biosynthesis protein CbiD 1175 452 Op 22 . - CDS 1222934 - 1223713 1004 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 1176 452 Op 23 34/0.000 - CDS 1223713 - 1224579 371 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1177 452 Op 24 8/0.008 - CDS 1224576 - 1225349 699 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 1178 452 Op 25 4/0.036 - CDS 1225372 - 1225695 493 ## COG1930 ABC-type cobalt transport system, periplasmic component 1179 452 Op 26 . - CDS 1225697 - 1226446 807 ## COG0310 ABC-type Co2+ transport system, permease component - Prom 1226605 - 1226664 3.3 1180 453 Op 1 1/0.168 - CDS 1226761 - 1227534 823 ## COG2099 Precorrin-6x reductase 1181 453 Op 2 . - CDS 1227550 - 1228626 1021 ## COG2073 Cobalamin biosynthesis protein CbiG 1182 453 Op 3 . - CDS 1228676 - 1229149 510 ## COG2032 Cu/Zn superoxide dismutase - Prom 1229243 - 1229302 7.5 + Prom 1229165 - 1229224 5.6 1183 454 Op 1 . + CDS 1229271 - 1230089 833 ## COG0726 Predicted xylanase/chitin deacetylase + Prom 1230092 - 1230151 3.9 1184 454 Op 2 . + CDS 1230172 - 1230525 354 ## gi|225569075|ref|ZP_03778100.1| hypothetical protein CLOHYLEM_05154 + Term 1230540 - 1230589 11.3 - Term 1230526 - 1230579 3.7 1185 455 Op 1 . - CDS 1230589 - 1231533 1061 ## COG1275 Tellurite resistance protein and related permeases 1186 455 Op 2 . - CDS 1231547 - 1232020 648 ## Closa_1050 C_GCAxxG_C_C family protein - Prom 1232062 - 1232121 3.6 1187 456 Op 1 5/0.024 - CDS 1232164 - 1232580 415 ## COG1786 Uncharacterized conserved protein 1188 456 Op 2 . - CDS 1232583 - 1233836 1063 ## COG1679 Uncharacterized conserved protein - Prom 1233890 - 1233949 7.4 + Prom 1233840 - 1233899 9.4 1189 457 Tu 1 . + CDS 1233987 - 1234865 1083 ## COG0583 Transcriptional regulator + Term 1234903 - 1234952 7.2 - TRNA 1234949 - 1235019 57.6 # Trp CCA 0 0 - Term 1234889 - 1234938 7.2 1190 458 Tu 1 . - CDS 1235100 - 1235333 282 ## Closa_0017 hypothetical protein - Prom 1235381 - 1235440 4.8 1191 459 Op 1 7/0.008 - CDS 1235447 - 1237186 1570 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 1192 459 Op 2 3/0.052 - CDS 1237170 - 1237949 841 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 1238011 - 1238070 6.6 - Term 1238014 - 1238064 11.2 1193 460 Op 1 . - CDS 1238073 - 1239218 944 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase - Prom 1239300 - 1239359 2.1 1194 460 Op 2 . - CDS 1239380 - 1239571 98 ## gi|225569085|ref|ZP_03778110.1| hypothetical protein CLOHYLEM_05165 - Prom 1239613 - 1239672 4.2 1195 461 Op 1 . - CDS 1240062 - 1240520 457 ## COG0346 Lactoylglutathione lyase and related lyases 1196 461 Op 2 . - CDS 1240573 - 1240986 200 ## Clole_2554 hypothetical protein 1197 461 Op 3 . - CDS 1241049 - 1241507 364 ## ELI_2084 hypothetical protein - Prom 1241537 - 1241596 3.5 - Term 1241566 - 1241602 -0.6 1198 462 Op 1 . - CDS 1241674 - 1242168 196 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 1199 462 Op 2 . - CDS 1242268 - 1242633 130 ## gi|225569091|ref|ZP_03778116.1| hypothetical protein CLOHYLEM_05171 - Prom 1242667 - 1242726 4.5 1200 463 Tu 1 . - CDS 1242895 - 1243371 200 ## COG4430 Uncharacterized protein conserved in bacteria - Prom 1243427 - 1243486 1.6 1201 464 Op 1 . - CDS 1243489 - 1243563 69 ## 1202 464 Op 2 . - CDS 1243569 - 1243832 188 ## Clole_3888 hypothetical protein 1203 464 Op 3 . - CDS 1243915 - 1244745 399 ## Ccel_2016 AraC family transcriptional regulator - Prom 1244797 - 1244856 4.6 1204 465 Op 1 . - CDS 1245035 - 1245322 357 ## Spico_0255 hypothetical protein 1205 465 Op 2 . - CDS 1245303 - 1245716 311 ## COG4898 Uncharacterized protein conserved in bacteria - Prom 1245765 - 1245824 6.5 1206 466 Tu 1 . - CDS 1245915 - 1246736 401 ## COG0789 Predicted transcriptional regulators - Prom 1246771 - 1246830 6.4 + Prom 1246684 - 1246743 5.6 1207 467 Tu 1 . + CDS 1246821 - 1248152 1021 ## COG0534 Na+-driven multidrug efflux pump 1208 468 Op 1 . - CDS 1248201 - 1249226 1141 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 1209 468 Op 2 3/0.052 - CDS 1249256 - 1249996 601 ## COG1714 Predicted membrane protein/domain 1210 468 Op 3 . - CDS 1249977 - 1250954 1299 ## COG0616 Periplasmic serine proteases (ClpP class) 1211 468 Op 4 40/0.000 - CDS 1250972 - 1253392 2700 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 1212 468 Op 5 . - CDS 1253411 - 1254430 1211 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Term 1254476 - 1254509 5.2 1213 468 Op 6 . - CDS 1254510 - 1254575 56 ## - Prom 1254722 - 1254781 3.8 1214 469 Tu 1 . - CDS 1254783 - 1255634 724 ## COG1295 Predicted membrane protein - Prom 1255706 - 1255765 4.8 + Prom 1255566 - 1255625 8.4 1215 470 Tu 1 . + CDS 1255756 - 1256328 685 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 1216 471 Tu 1 . - CDS 1256308 - 1258509 1415 ## COG2200 FOG: EAL domain - Prom 1258574 - 1258633 9.2 + Prom 1258618 - 1258677 11.1 1217 472 Tu 1 . + CDS 1258702 - 1260162 660 ## COG2188 Transcriptional regulators + Term 1260174 - 1260235 16.1 - Term 1260168 - 1260215 16.1 1218 473 Tu 1 . - CDS 1260229 - 1261554 1360 ## COG2385 Sporulation protein and related proteins - Prom 1261599 - 1261658 3.8 - Term 1261643 - 1261679 4.0 1219 474 Op 1 . - CDS 1261822 - 1261884 67 ## - Prom 1261905 - 1261964 2.0 - Term 1261906 - 1261942 4.2 1220 474 Op 2 . - CDS 1261967 - 1263658 1604 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) - Prom 1263772 - 1263831 6.4 - Term 1263793 - 1263846 13.4 1221 475 Op 1 . - CDS 1263851 - 1264195 502 ## gi|225569115|ref|ZP_03778140.1| hypothetical protein CLOHYLEM_05195 1222 475 Op 2 . - CDS 1264210 - 1265700 1767 ## COG0498 Threonine synthase 1223 475 Op 3 . - CDS 1265714 - 1266988 1495 ## COG1757 Na+/H+ antiporter 1224 475 Op 4 30/0.000 - CDS 1267004 - 1267495 591 ## COG0066 3-isopropylmalate dehydratase small subunit 1225 475 Op 5 . - CDS 1267495 - 1268769 1438 ## COG0065 3-isopropylmalate dehydratase large subunit 1226 475 Op 6 . - CDS 1268791 - 1270317 1315 ## EUBREC_3569 hypothetical protein - Prom 1270542 - 1270601 6.8 + Prom 1270450 - 1270509 5.8 1227 476 Tu 1 . + CDS 1270570 - 1272036 1598 ## COG0733 Na+-dependent transporters of the SNF family 1228 477 Op 1 . - CDS 1272031 - 1272102 69 ## 1229 477 Op 2 . - CDS 1272102 - 1272995 782 ## COG4905 Predicted membrane protein - Prom 1273016 - 1273075 6.3 + Prom 1272937 - 1272996 8.0 1230 478 Op 1 . + CDS 1273043 - 1273273 303 ## Cphy_3525 FeoA family protein 1231 478 Op 2 . + CDS 1273270 - 1275312 2286 ## COG0370 Fe2+ transport system protein B + Term 1275315 - 1275375 26.1 - Term 1275309 - 1275357 17.2 1232 479 Op 1 6/0.016 - CDS 1275373 - 1276740 1277 ## COG1012 NAD-dependent aldehyde dehydrogenases 1233 479 Op 2 . - CDS 1276751 - 1277944 1423 ## COG1454 Alcohol dehydrogenase, class IV - Prom 1277993 - 1278052 2.7 - Term 1278008 - 1278060 10.4 1234 480 Op 1 . - CDS 1278061 - 1278885 925 ## Metev_1246 phosphoresterase PHP domain-containing protein - Prom 1278906 - 1278965 5.4 1235 480 Op 2 . - CDS 1278967 - 1279152 274 ## gi|225569128|ref|ZP_03778153.1| hypothetical protein CLOHYLEM_05208 1236 480 Op 3 . - CDS 1279215 - 1279940 1092 ## gi|225569129|ref|ZP_03778154.1| hypothetical protein CLOHYLEM_05209 1237 480 Op 4 . - CDS 1279990 - 1280985 933 ## Closa_2784 hypothetical protein - Prom 1281050 - 1281109 7.9 - Term 1281599 - 1281633 6.0 1238 481 Tu 1 . - CDS 1281736 - 1282530 875 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 1282632 - 1282691 5.1 + Prom 1282662 - 1282721 7.8 1239 482 Tu 1 . + CDS 1282794 - 1283441 815 ## COG1802 Transcriptional regulators + Term 1283447 - 1283515 17.2 - Term 1283445 - 1283491 16.3 1240 483 Op 1 . - CDS 1283512 - 1284426 520 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 1241 483 Op 2 4/0.036 - CDS 1284452 - 1286818 2510 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 1286886 - 1286945 6.6 1242 484 Op 1 . - CDS 1286989 - 1287681 705 ## COG1180 Pyruvate-formate lyase-activating enzyme 1243 484 Op 2 1/0.168 - CDS 1287761 - 1288396 726 ## COG1309 Transcriptional regulator 1244 484 Op 3 . - CDS 1288453 - 1288740 393 ## COG1254 Acylphosphatases - Term 1288791 - 1288850 22.2 1245 485 Op 1 11/0.004 - CDS 1288872 - 1291247 2929 ## COG1882 Pyruvate-formate lyase 1246 485 Op 2 . - CDS 1291252 - 1292160 956 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 1292211 - 1292270 4.0 - Term 1292220 - 1292265 5.1 1247 486 Op 1 . - CDS 1292317 - 1293273 860 ## DSY1098 hypothetical protein - Prom 1293295 - 1293354 7.5 1248 486 Op 2 . - CDS 1293367 - 1293990 760 ## CDR20291_2714 hypothetical protein - Prom 1294046 - 1294105 2.3 + Prom 1294054 - 1294113 9.1 1249 487 Op 1 4/0.036 + CDS 1294137 - 1294685 195 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 1250 487 Op 2 . + CDS 1294676 - 1295065 334 ## COG3543 Uncharacterized conserved protein + Term 1295091 - 1295142 12.1 - Term 1295079 - 1295130 4.4 1251 488 Op 1 . - CDS 1295174 - 1295710 780 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 1252 488 Op 2 . - CDS 1295741 - 1299529 4162 ## COG0841 Cation/multidrug efflux pump - Prom 1299615 - 1299674 5.2 + Prom 1299654 - 1299713 6.0 1253 489 Tu 1 . + CDS 1299738 - 1300463 226 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Term 1300395 - 1300440 9.2 1254 490 Op 1 . - CDS 1300460 - 1301212 778 ## COG0708 Exonuclease III 1255 490 Op 2 . - CDS 1301242 - 1301976 699 ## COG0101 Pseudouridylate synthase - Prom 1302122 - 1302181 5.8 - Term 1302125 - 1302169 10.1 1256 491 Op 1 1/0.168 - CDS 1302221 - 1302742 495 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 1257 491 Op 2 . - CDS 1302758 - 1303000 353 ## COG1873 Uncharacterized conserved protein - Term 1303026 - 1303071 15.1 1258 492 Op 1 4/0.036 - CDS 1303124 - 1304338 1542 ## COG1668 ABC-type Na+ efflux pump, permease component 1259 492 Op 2 . - CDS 1304340 - 1305113 353 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 1260 492 Op 3 . - CDS 1305189 - 1305638 433 ## CA_C3323 hypothetical protein 1261 492 Op 4 . - CDS 1305641 - 1305847 305 ## COG1476 Predicted transcriptional regulators - Prom 1305890 - 1305949 6.0 - Term 1305952 - 1305987 6.1 1262 493 Op 1 . - CDS 1306010 - 1306195 280 ## gi|225569158|ref|ZP_03778183.1| hypothetical protein CLOHYLEM_05238 1263 493 Op 2 . - CDS 1306256 - 1307185 1146 ## COG0549 Carbamate kinase + TRNA 1307470 - 1307540 61.1 # Gly CCC 0 0 + Prom 1307467 - 1307526 74.0 1264 494 Op 1 . + CDS 1307669 - 1307824 142 ## gi|225569161|ref|ZP_03778186.1| hypothetical protein CLOHYLEM_05242 + Prom 1307879 - 1307938 3.0 1265 494 Op 2 . + CDS 1307980 - 1308309 328 ## ABC2457 stage 0 sporulation protein A + Term 1308388 - 1308416 1.3 - Term 1308376 - 1308404 1.3 1266 495 Tu 1 . - CDS 1308451 - 1309773 879 ## Tlet_1253 peptidase S41 - Prom 1309804 - 1309863 12.5 1267 496 Op 1 . - CDS 1309906 - 1310967 759 ## RCIX233 hypothetical protein 1268 496 Op 2 . - CDS 1310979 - 1311779 656 ## COG0789 Predicted transcriptional regulators - Prom 1311847 - 1311906 4.1 - Term 1311852 - 1311900 10.2 1269 497 Tu 1 . - CDS 1311927 - 1312151 346 ## gi|225569166|ref|ZP_03778191.1| hypothetical protein CLOHYLEM_05247 - Prom 1312200 - 1312259 4.0 1270 498 Op 1 . - CDS 1312267 - 1312398 80 ## 1271 498 Op 2 . - CDS 1312358 - 1313200 586 ## BCZK3470 triple helix repeat-containing collagen - Prom 1313224 - 1313283 5.0 - Term 1313349 - 1313378 -0.4 1272 499 Tu 1 . - CDS 1313400 - 1314140 443 ## BF1987 hypothetical protein - Prom 1314254 - 1314313 3.6 + Prom 1314238 - 1314297 9.0 1273 500 Tu 1 . + CDS 1314345 - 1314698 233 ## Bsph_3503 stage 0 sporulation protein A + Term 1314699 - 1314727 2.1 + Prom 1314925 - 1314984 10.0 1274 501 Tu 1 . + CDS 1315017 - 1315256 178 ## Dhaf_2870 XRE family transcriptional regulator 1275 502 Tu 1 . - CDS 1315595 - 1315858 257 ## CCV52592_2220 prevent-host-death family protein - Prom 1315880 - 1315939 6.9 - Term 1316064 - 1316110 4.1 1276 503 Op 1 . - CDS 1316219 - 1316614 437 ## Dhaf_4163 HEPN domain protein 1277 503 Op 2 . - CDS 1316607 - 1316939 302 ## EUBREC_2451 hypothetical protein 1278 503 Op 3 . - CDS 1317000 - 1317179 100 ## - Prom 1317409 - 1317468 6.6 - TRNA 1317213 - 1317287 80.5 # Pro GGG 0 0 + Prom 1317404 - 1317463 6.7 1279 504 Op 1 . + CDS 1317504 - 1318301 878 ## COG0289 Dihydrodipicolinate reductase + Prom 1318304 - 1318363 4.1 1280 504 Op 2 . + CDS 1318398 - 1318712 332 ## COG0393 Uncharacterized conserved protein - Term 1318728 - 1318789 23.1 1281 505 Op 1 . - CDS 1318797 - 1319396 619 ## Sfum_3306 nicotinamide mononucleotide adenylyltransferase 1282 505 Op 2 . - CDS 1319493 - 1321073 1770 ## COG0513 Superfamily II DNA and RNA helicases - Prom 1321177 - 1321236 5.3 - Term 1321179 - 1321227 10.2 1283 506 Op 1 . - CDS 1321305 - 1322237 297 ## PROTEIN SUPPORTED gi|90020671|ref|YP_526498.1| ribosomal protein S6 1284 506 Op 2 . - CDS 1322311 - 1323039 180 ## gi|225569184|ref|ZP_03778209.1| hypothetical protein CLOHYLEM_05266 - Prom 1323208 - 1323267 9.4 + Prom 1323215 - 1323274 8.9 1285 507 Tu 1 . + CDS 1323307 - 1324464 249 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 1286 508 Tu 1 . - CDS 1324514 - 1325752 1323 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain - Prom 1325801 - 1325860 2.1 - Term 1325901 - 1325944 12.3 1287 509 Op 1 . - CDS 1325948 - 1326433 701 ## Sterm_2242 hypothetical protein 1288 509 Op 2 . - CDS 1326446 - 1327108 925 ## COG3601 Predicted membrane protein - Prom 1327347 - 1327406 6.7 1289 510 Op 1 . - CDS 1327419 - 1328183 947 ## COG1878 Predicted metal-dependent hydrolase - Prom 1328204 - 1328263 4.8 1290 510 Op 2 . - CDS 1328273 - 1329430 1358 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases - Prom 1329521 - 1329580 3.7 + Prom 1329478 - 1329537 5.4 1291 511 Op 1 . + CDS 1329579 - 1329905 444 ## COG1695 Predicted transcriptional regulators 1292 511 Op 2 . + CDS 1329902 - 1330591 810 ## Amet_3017 hypothetical protein + Prom 1330593 - 1330652 4.0 1293 511 Op 3 . + CDS 1330681 - 1331358 592 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 1331373 - 1331421 10.4 - Term 1331361 - 1331409 11.2 1294 512 Tu 1 . - CDS 1331439 - 1332794 1657 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 1332836 - 1332895 2.9 - Term 1332845 - 1332885 5.2 1295 513 Op 1 . - CDS 1332924 - 1333685 841 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 1296 513 Op 2 . - CDS 1333732 - 1334691 1169 ## COG1052 Lactate dehydrogenase and related dehydrogenases 1297 513 Op 3 21/0.000 - CDS 1334743 - 1335693 1023 ## COG1984 Allophanate hydrolase subunit 2 1298 513 Op 4 . - CDS 1335693 - 1336421 723 ## COG2049 Allophanate hydrolase subunit 1 - Prom 1336492 - 1336551 11.6 1299 514 Tu 1 . - CDS 1336563 - 1337474 967 ## COG0583 Transcriptional regulator - Prom 1337527 - 1337586 8.8 + Prom 1337473 - 1337532 6.7 1300 515 Op 1 . + CDS 1337628 - 1338902 1232 ## COG0520 Selenocysteine lyase 1301 515 Op 2 . + CDS 1338959 - 1340092 1226 ## COG1929 Glycerate kinase + Term 1340099 - 1340162 1.5 - Term 1340087 - 1340150 1.5 1302 516 Op 1 . - CDS 1340167 - 1340478 462 ## COG0526 Thiol-disulfide isomerase and thioredoxins 1303 516 Op 2 . - CDS 1340549 - 1342231 1636 ## COG0249 Mismatch repair ATPase (MutS family) 1304 516 Op 3 40/0.000 - CDS 1342312 - 1343700 1307 ## COG0642 Signal transduction histidine kinase 1305 516 Op 4 . - CDS 1343691 - 1344353 533 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1306 516 Op 5 . - CDS 1344353 - 1345114 697 ## BAS3614 bacteriocin ABC transporter permease subunit 1307 516 Op 6 . - CDS 1345111 - 1345893 737 ## NT01CX_1430 antibiotic permease protein SpaE/MutE 1308 516 Op 7 . - CDS 1345895 - 1346602 253 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 1346633 - 1346692 8.8 - Term 1346661 - 1346713 16.3 1309 517 Tu 1 . - CDS 1346714 - 1348576 1963 ## Msm_0823 phosphoenolpyruvate synthase/pyruvate phosphate dikinase, PpsA - Prom 1348679 - 1348738 9.4 + Prom 1348647 - 1348706 9.8 1310 518 Op 1 . + CDS 1348738 - 1350000 1110 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 1311 518 Op 2 1/0.168 + CDS 1350029 - 1351291 1419 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 1351313 - 1351365 15.7 + Prom 1351326 - 1351385 5.2 1312 519 Tu 1 . + CDS 1351411 - 1352370 982 ## COG0583 Transcriptional regulator + Prom 1352405 - 1352464 4.7 1313 520 Tu 1 . + CDS 1352509 - 1354545 1784 ## COG0642 Signal transduction histidine kinase + Term 1354587 - 1354629 7.5 - Term 1354574 - 1354617 9.1 1314 521 Op 1 . - CDS 1354629 - 1356419 1766 ## COG2936 Predicted acyl esterases 1315 521 Op 2 . - CDS 1356434 - 1358170 1415 ## COG2936 Predicted acyl esterases - Prom 1358190 - 1358249 4.0 1316 522 Op 1 . - CDS 1358264 - 1359538 1269 ## COG3844 Kynureninase 1317 522 Op 2 . - CDS 1359578 - 1360954 1977 ## COG0531 Amino acid transporters 1318 522 Op 3 . - CDS 1360986 - 1361696 921 ## COG1878 Predicted metal-dependent hydrolase 1319 522 Op 4 . - CDS 1361712 - 1362650 926 ## COG4978 Transcriptional regulator, effector-binding domain/component - Prom 1362695 - 1362754 6.1 + Prom 1362888 - 1362947 5.5 1320 523 Op 1 . + CDS 1362994 - 1363476 429 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 1321 523 Op 2 . + CDS 1363492 - 1364310 691 ## GYMC10_6178 hypothetical protein + Term 1364327 - 1364381 16.2 - Term 1364313 - 1364367 16.2 1322 524 Op 1 . - CDS 1364408 - 1365427 961 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 1323 524 Op 2 . - CDS 1365424 - 1366299 1161 ## COG0682 Prolipoprotein diacylglyceryltransferase 1324 524 Op 3 . - CDS 1366320 - 1367420 1485 ## COG0012 Predicted GTPase, probable translation factor 1325 524 Op 4 6/0.016 - CDS 1367480 - 1368145 1003 ## COG1564 Thiamine pyrophosphokinase 1326 524 Op 5 10/0.008 - CDS 1368138 - 1368800 794 ## COG0036 Pentose-5-phosphate-3-epimerase 1327 524 Op 6 7/0.008 - CDS 1368804 - 1369682 881 ## COG1162 Predicted GTPases 1328 524 Op 7 17/0.000 - CDS 1369714 - 1371825 2321 ## COG0515 Serine/threonine protein kinase 1329 524 Op 8 5/0.024 - CDS 1371819 - 1372562 923 ## COG0631 Serine/threonine protein phosphatase 1330 524 Op 9 4/0.036 - CDS 1372540 - 1373550 995 ## COG0820 Predicted Fe-S-cluster redox enzyme 1331 524 Op 10 2/0.096 - CDS 1373603 - 1374907 1340 ## COG0144 tRNA and rRNA cytosine-C5-methylases 1332 524 Op 11 1/0.168 - CDS 1374930 - 1375637 771 ## COG2738 Predicted Zn-dependent protease - Prom 1375658 - 1375717 4.9 1333 525 Op 1 26/0.000 - CDS 1375723 - 1376637 1135 ## COG0223 Methionyl-tRNA formyltransferase 1334 525 Op 2 4/0.036 - CDS 1376654 - 1377127 843 ## COG0242 N-formylmethionyl-tRNA deformylase 1335 525 Op 3 . - CDS 1377142 - 1379370 2157 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 1336 525 Op 4 . - CDS 1379360 - 1380832 1798 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 1380862 - 1380921 5.7 + Prom 1380821 - 1380880 4.9 1337 526 Tu 1 . + CDS 1380997 - 1382220 1109 ## COG2195 Di- and tripeptidases + Term 1382227 - 1382277 17.7 - Term 1382222 - 1382256 4.1 1338 527 Tu 1 . - CDS 1382286 - 1383155 1250 ## COG1284 Uncharacterized conserved protein - Prom 1383213 - 1383272 6.5 - Term 1383225 - 1383272 10.2 1339 528 Op 1 . - CDS 1383333 - 1384586 990 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 1340 528 Op 2 . - CDS 1384652 - 1387246 1797 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 1387333 - 1387392 12.2 - Term 1387338 - 1387384 3.5 1341 529 Tu 1 . - CDS 1387400 - 1388878 1232 ## ELI_1104 hypothetical protein - Prom 1388906 - 1388965 4.9 + Prom 1388870 - 1388929 9.6 1342 530 Tu 1 . + CDS 1389043 - 1391481 2137 ## COG0642 Signal transduction histidine kinase + Term 1391705 - 1391738 -0.4 1343 531 Tu 1 . - CDS 1391496 - 1392392 906 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 1392426 - 1392485 10.0 1344 532 Tu 1 . + CDS 1392745 - 1393680 927 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Term 1393651 - 1393692 5.6 1345 533 Op 1 . - CDS 1393694 - 1394116 453 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 1346 533 Op 2 . - CDS 1394133 - 1394618 586 ## Cphy_0324 peptidase A8 signal peptidase II 1347 533 Op 3 . - CDS 1394619 - 1394909 300 ## gi|225569249|ref|ZP_03778274.1| hypothetical protein CLOHYLEM_05331 1348 533 Op 4 . - CDS 1394946 - 1396652 1893 ## COG1404 Subtilisin-like serine proteases 1349 533 Op 5 . - CDS 1396719 - 1397978 1592 ## COG0475 Kef-type K+ transport systems, membrane components 1350 533 Op 6 . - CDS 1397978 - 1399417 1932 ## COG1219 ATP-dependent protease Clp, ATPase subunit 1351 533 Op 7 . - CDS 1399435 - 1401405 2241 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 1352 533 Op 8 . - CDS 1401353 - 1402096 666 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 1353 533 Op 9 . - CDS 1402083 - 1403264 1177 ## CTC00591 hypothetical protein 1354 533 Op 10 . - CDS 1403274 - 1404677 1387 ## COG1696 Predicted membrane protein involved in D-alanine export 1355 533 Op 11 . - CDS 1404695 - 1405189 535 ## CbC4_0499 lipoprotein 1356 533 Op 12 . - CDS 1405189 - 1406055 1082 ## CbC4_0498 platelet activating factor acetylhydrolase-like protein - Prom 1406201 - 1406260 2.7 + Prom 1406045 - 1406104 7.2 1357 534 Tu 1 . + CDS 1406208 - 1406690 583 ## bpr_I1818 hypothetical protein + Term 1406715 - 1406760 6.1 - Term 1406695 - 1406751 11.1 1358 535 Tu 1 . - CDS 1406761 - 1408827 2824 ## COG0326 Molecular chaperone, HSP90 family - Prom 1408892 - 1408951 5.6 - Term 1408923 - 1408961 8.1 1359 536 Op 1 36/0.000 - CDS 1408979 - 1412407 3886 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 1360 536 Op 2 . - CDS 1412418 - 1413110 334 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 1413205 - 1413264 8.2 + Prom 1413180 - 1413239 8.7 1361 537 Tu 1 . + CDS 1413291 - 1413794 320 ## PROTEIN SUPPORTED gi|229884790|ref|ZP_04504247.1| acetyltransferase, ribosomal protein N-acetylase - Term 1413793 - 1413846 -0.8 1362 538 Op 1 . - CDS 1413865 - 1415013 1245 ## COG1454 Alcohol dehydrogenase, class IV 1363 538 Op 2 39/0.000 - CDS 1415042 - 1415962 1277 ## COG0074 Succinyl-CoA synthetase, alpha subunit 1364 538 Op 3 . - CDS 1415946 - 1417097 1204 ## COG0045 Succinyl-CoA synthetase, beta subunit 1365 538 Op 4 . - CDS 1417191 - 1418573 349 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 1366 538 Op 5 . - CDS 1418603 - 1420033 1337 ## COG0471 Di- and tricarboxylate transporters - Prom 1420065 - 1420124 5.2 - Term 1420221 - 1420267 11.4 1367 539 Op 1 . - CDS 1420281 - 1421075 602 ## COG1414 Transcriptional regulator - Prom 1421148 - 1421207 4.4 - Term 1421193 - 1421224 1.0 1368 539 Op 2 . - CDS 1421253 - 1421684 533 ## COG1959 Predicted transcriptional regulator - Prom 1421740 - 1421799 2.2 1369 540 Op 1 . - CDS 1421803 - 1421898 167 ## 1370 540 Op 2 . - CDS 1421873 - 1422748 754 ## COG0348 Polyferredoxin 1371 540 Op 3 . - CDS 1422750 - 1422863 85 ## 1372 540 Op 4 . - CDS 1422893 - 1423492 534 ## Tresu_1951 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen - Prom 1423536 - 1423595 8.6 + Prom 1423498 - 1423557 10.4 1373 541 Tu 1 . + CDS 1423643 - 1424521 838 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 1424537 - 1424583 13.0 - Term 1424529 - 1424565 7.0 1374 542 Op 1 . - CDS 1424586 - 1426433 1472 ## COG4905 Predicted membrane protein 1375 542 Op 2 21/0.000 - CDS 1426466 - 1427896 1512 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 1376 542 Op 3 31/0.000 - CDS 1427899 - 1429392 1649 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 1377 542 Op 4 . - CDS 1429418 - 1429711 372 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 1378 542 Op 5 . - CDS 1429723 - 1430832 914 ## gi|225569281|ref|ZP_03778306.1| hypothetical protein CLOHYLEM_05363 1379 542 Op 6 . - CDS 1430863 - 1432194 1480 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases - Prom 1432232 - 1432291 7.3 1380 543 Op 1 . - CDS 1432594 - 1434156 1896 ## COG0038 Chloride channel protein EriC - Prom 1434185 - 1434244 4.5 1381 543 Op 2 . - CDS 1434247 - 1435155 949 ## Closa_3658 hypothetical protein 1382 543 Op 3 4/0.036 - CDS 1435167 - 1436564 1409 ## COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component 1383 543 Op 4 24/0.000 - CDS 1436574 - 1437440 924 ## COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 1384 543 Op 5 . - CDS 1437424 - 1438407 1289 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 1438444 - 1438503 3.5 - Term 1438465 - 1438530 10.4 1385 544 Tu 1 . - CDS 1438537 - 1438878 338 ## Thit_1098 sporulation transcriptional activator Spo0A - Prom 1438911 - 1438970 6.1 - Term 1439017 - 1439059 6.1 1386 545 Tu 1 . - CDS 1439203 - 1440615 1514 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase + Prom 1440825 - 1440884 6.8 1387 546 Op 1 35/0.000 + CDS 1440904 - 1442673 1512 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 1388 546 Op 2 . + CDS 1442679 - 1444412 260 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 1444442 - 1444485 6.7 - Term 1444430 - 1444473 7.3 1389 547 Tu 1 . - CDS 1444518 - 1445642 1278 ## COG2768 Uncharacterized Fe-S center protein - Prom 1445887 - 1445946 10.6 - Term 1445742 - 1445789 6.3 1390 548 Op 1 1/0.168 - CDS 1445986 - 1447032 1069 ## COG0392 Predicted integral membrane protein 1391 548 Op 2 1/0.168 - CDS 1447025 - 1447714 584 ## COG0726 Predicted xylanase/chitin deacetylase 1392 548 Op 3 . - CDS 1447714 - 1448796 1134 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase - Prom 1448817 - 1448876 3.8 - Term 1448924 - 1448978 16.1 1393 549 Op 1 . - CDS 1449066 - 1451168 1876 ## COG3291 FOG: PKD repeat 1394 549 Op 2 . - CDS 1451168 - 1451374 104 ## gi|225569999|ref|ZP_03779024.1| hypothetical protein CLOHYLEM_06094 - Prom 1451483 - 1451542 3.8 - Term 1451503 - 1451547 5.1 1395 550 Op 1 4/0.036 - CDS 1451714 - 1453201 1620 ## COG4468 Galactose-1-phosphate uridyltransferase 1396 550 Op 2 . - CDS 1453231 - 1454463 1096 ## COG0153 Galactokinase - Prom 1454492 - 1454551 6.8 + Prom 1454448 - 1454507 7.1 1397 551 Tu 1 . + CDS 1454564 - 1455457 561 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 1455333 - 1455361 -0.3 1398 552 Tu 1 . - CDS 1455446 - 1456324 732 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 1456372 - 1456431 8.3 + Prom 1456328 - 1456387 5.4 1399 553 Tu 1 . + CDS 1456468 - 1457085 472 ## COG1309 Transcriptional regulator - Term 1456909 - 1456947 4.1 1400 554 Tu 1 . - CDS 1457048 - 1458961 1655 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 1459002 - 1459061 7.2 - Term 1458977 - 1459035 -0.9 1401 555 Op 1 . - CDS 1459065 - 1459436 426 ## COG0789 Predicted transcriptional regulators 1402 555 Op 2 . - CDS 1459472 - 1460008 485 ## COG0655 Multimeric flavodoxin WrbA 1403 555 Op 3 1/0.168 - CDS 1460086 - 1460904 590 ## COG1606 ATP-utilizing enzymes of the PP-loop superfamily 1404 555 Op 4 2/0.096 - CDS 1460888 - 1462180 947 ## COG1641 Uncharacterized conserved protein 1405 555 Op 5 . - CDS 1462182 - 1462925 952 ## COG1691 NCAIR mutase (PurE)-related proteins 1406 555 Op 6 34/0.000 - CDS 1462929 - 1463681 335 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1407 555 Op 7 8/0.008 - CDS 1463701 - 1464504 913 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 1408 555 Op 8 . - CDS 1464488 - 1465504 1138 ## COG0310 ABC-type Co2+ transport system, permease component - Prom 1465544 - 1465603 3.4 - Term 1465707 - 1465744 5.4 1409 556 Tu 1 . - CDS 1465777 - 1466193 590 ## Closa_1010 hypothetical protein - Prom 1466246 - 1466305 5.2 1410 557 Tu 1 . - CDS 1466314 - 1467453 1360 ## COG1453 Predicted oxidoreductases of the aldo/keto reductase family - Prom 1467482 - 1467541 3.3 1411 558 Tu 1 . - CDS 1467581 - 1467853 203 ## gi|225569317|ref|ZP_03778342.1| hypothetical protein CLOHYLEM_05399 - Prom 1468026 - 1468085 7.8 + Prom 1467814 - 1467873 5.1 1412 559 Tu 1 . + CDS 1468108 - 1469007 97 ## SPCG_1125 hypothetical protein + Prom 1469019 - 1469078 1.8 1413 560 Tu 1 . + CDS 1469141 - 1469995 468 ## Dtox_3883 KilA domain-containing protein 1414 561 Op 1 . + CDS 1470112 - 1471422 1002 ## COG1362 Aspartyl aminopeptidase 1415 561 Op 2 . + CDS 1471483 - 1472517 772 ## Clole_4127 ArsR family transcriptional regulator + Term 1472586 - 1472622 3.2 + Prom 1472612 - 1472671 6.9 1416 562 Tu 1 . + CDS 1472713 - 1474344 201 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 1474312 - 1474352 0.3 1417 563 Op 1 40/0.000 - CDS 1474374 - 1475417 521 ## COG0642 Signal transduction histidine kinase 1418 563 Op 2 . - CDS 1475405 - 1476073 415 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1476105 - 1476164 9.8 + Prom 1476154 - 1476213 5.4 1419 564 Op 1 36/0.000 + CDS 1476241 - 1477617 1295 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 1420 564 Op 2 . + CDS 1477634 - 1478320 259 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 1421 564 Op 3 . + CDS 1478317 - 1478463 239 ## gi|225569327|ref|ZP_03778352.1| hypothetical protein CLOHYLEM_05409 1422 564 Op 4 . + CDS 1478473 - 1479411 586 ## COG0348 Polyferredoxin 1423 564 Op 5 . + CDS 1479465 - 1480715 1088 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 1480733 - 1480792 2.9 1424 564 Op 6 . + CDS 1480814 - 1481275 434 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 1425 565 Op 1 11/0.004 - CDS 1481298 - 1482041 533 ## COG1180 Pyruvate-formate lyase-activating enzyme 1426 565 Op 2 . - CDS 1482067 - 1484436 2458 ## COG1882 Pyruvate-formate lyase - Prom 1484476 - 1484535 5.5 - Term 1484507 - 1484551 14.5 1427 566 Op 1 . - CDS 1484572 - 1485264 516 ## COG1011 Predicted hydrolase (HAD superfamily) 1428 566 Op 2 . - CDS 1485313 - 1485825 626 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1429 566 Op 3 9/0.008 - CDS 1485900 - 1486619 867 ## COG3279 Response regulator of the LytR/AlgR family 1430 566 Op 4 . - CDS 1486622 - 1488307 1463 ## COG3275 Putative regulator of cell autolysis - Prom 1488372 - 1488431 3.5 - Term 1488376 - 1488426 15.1 1431 567 Tu 1 . - CDS 1488481 - 1489734 1382 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 1489790 - 1489849 5.3 - Term 1489908 - 1489945 5.2 1432 568 Op 1 10/0.008 - CDS 1489973 - 1490602 693 ## COG2376 Dihydroxyacetone kinase 1433 568 Op 2 . - CDS 1490615 - 1491625 1156 ## COG2376 Dihydroxyacetone kinase 1434 568 Op 3 1/0.168 - CDS 1491638 - 1492597 1222 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 1435 568 Op 4 . - CDS 1492616 - 1493533 932 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 1436 568 Op 5 11/0.004 - CDS 1493552 - 1494493 1135 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1437 568 Op 6 21/0.000 - CDS 1494493 - 1495461 1073 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1438 568 Op 7 2/0.096 - CDS 1495480 - 1495914 533 ## COG1129 ABC-type sugar transport system, ATPase component 1439 568 Op 8 . - CDS 1495901 - 1496974 706 ## COG1129 ABC-type sugar transport system, ATPase component 1440 568 Op 9 . - CDS 1496961 - 1497089 115 ## 1441 568 Op 10 . - CDS 1497100 - 1498239 1596 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 1498267 - 1498326 2.6 1442 568 Op 11 . - CDS 1498328 - 1499488 974 ## COG0006 Xaa-Pro aminopeptidase - Prom 1499533 - 1499592 6.4 + Prom 1499673 - 1499732 8.7 1443 569 Tu 1 . + CDS 1499792 - 1501714 1502 ## COG0524 Sugar kinases, ribokinase family + Term 1501722 - 1501758 6.2 1444 570 Tu 1 . - CDS 1501786 - 1502547 580 ## COG0778 Nitroreductase - Prom 1502605 - 1502664 6.9 - Term 1502612 - 1502663 3.6 1445 571 Op 1 . - CDS 1502667 - 1503050 178 ## CD1006 acetyltransferase 1446 571 Op 2 . - CDS 1503103 - 1503492 425 ## gi|225569354|ref|ZP_03778379.1| hypothetical protein CLOHYLEM_05436 - Prom 1503738 - 1503797 6.0 1447 572 Tu 1 . - CDS 1503823 - 1503915 202 ## - Prom 1504017 - 1504076 4.1 - TRNA 1504474 - 1504547 73.1 # Pro CGG 0 0 - TRNA 1504602 - 1504672 55.9 # Gln CTG 0 0 - Term 1504751 - 1504796 -0.4 1448 573 Op 1 . - CDS 1504843 - 1506051 870 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 1449 573 Op 2 . - CDS 1506048 - 1507397 1699 ## COG0534 Na+-driven multidrug efflux pump - Prom 1507422 - 1507481 7.0 + Prom 1507401 - 1507460 10.4 1450 574 Tu 1 . + CDS 1507502 - 1508299 833 ## COG0789 Predicted transcriptional regulators + Term 1508312 - 1508351 5.4 - Term 1508300 - 1508339 6.2 1451 575 Op 1 . - CDS 1508360 - 1509574 1238 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 1452 575 Op 2 . - CDS 1509604 - 1510437 1071 ## COG0253 Diaminopimelate epimerase 1453 575 Op 3 . - CDS 1510462 - 1511010 685 ## Closa_1273 ANTAR domain protein with unknown sensor 1454 575 Op 4 . - CDS 1511058 - 1512389 1464 ## COG0174 Glutamine synthetase - Prom 1512511 - 1512570 8.8 - Term 1512520 - 1512561 7.0 1455 576 Tu 1 . - CDS 1512582 - 1512791 322 ## Closa_1999 hypothetical protein - Prom 1512956 - 1513015 6.3 + Prom 1512874 - 1512933 6.4 1456 577 Tu 1 . + CDS 1512986 - 1513630 755 ## COG4869 Propanediol utilization protein + Term 1513697 - 1513738 0.2 - Term 1513520 - 1513552 -0.4 1457 578 Op 1 . - CDS 1513676 - 1513921 286 ## BHWA1_00053 hypothetical protein 1458 578 Op 2 . - CDS 1513942 - 1515144 1256 ## COG0426 Uncharacterized flavoproteins - Prom 1515225 - 1515284 8.1 1459 579 Op 1 . - CDS 1515332 - 1515973 830 ## gi|225569367|ref|ZP_03778392.1| hypothetical protein CLOHYLEM_05451 - Prom 1516001 - 1516060 7.5 1460 579 Op 2 . - CDS 1516066 - 1516836 1027 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 1516863 - 1516922 3.2 1461 579 Op 3 . - CDS 1516935 - 1517612 730 ## COG1309 Transcriptional regulator - Prom 1517748 - 1517807 6.9 + Prom 1517630 - 1517689 6.8 1462 580 Tu 1 . + CDS 1517887 - 1519062 1211 ## CLB_1105 hypothetical protein + Term 1519074 - 1519131 16.5 - Term 1519062 - 1519119 16.5 1463 581 Tu 1 . - CDS 1519176 - 1519595 449 ## COG0071 Molecular chaperone (small heat shock protein) - Prom 1519635 - 1519694 8.9 + Prom 1519696 - 1519755 10.6 1464 582 Tu 1 . + CDS 1519798 - 1520415 90 ## COG1309 Transcriptional regulator + Term 1520553 - 1520592 -0.9 + Prom 1520929 - 1520988 4.7 1465 583 Tu 1 . + CDS 1521033 - 1521155 75 ## gi|225569373|ref|ZP_03778398.1| hypothetical protein CLOHYLEM_05457 + Term 1521237 - 1521269 2.3 1466 584 Op 1 3/0.052 - CDS 1521261 - 1522190 1009 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 1467 584 Op 2 1/0.168 - CDS 1522214 - 1523098 1108 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Term 1523126 - 1523167 4.2 1468 585 Op 1 3/0.052 - CDS 1523210 - 1525024 1836 ## COG2199 FOG: GGDEF domain 1469 585 Op 2 . - CDS 1525070 - 1525924 979 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 1526054 - 1526113 80.4 - Term 1526022 - 1526089 27.3 1470 586 Op 1 36/0.000 - CDS 1526163 - 1528649 2685 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 1471 586 Op 2 4/0.036 - CDS 1528650 - 1529318 315 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 1529372 - 1529431 3.4 1472 587 Op 1 40/0.000 - CDS 1529434 - 1530519 895 ## COG0642 Signal transduction histidine kinase 1473 587 Op 2 40/0.000 - CDS 1530492 - 1531184 761 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1474 587 Op 3 40/0.000 - CDS 1531225 - 1532535 1388 ## COG0642 Signal transduction histidine kinase 1475 587 Op 4 7/0.008 - CDS 1532547 - 1533221 895 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1476 587 Op 5 32/0.000 - CDS 1533243 - 1533896 964 ## COG0704 Phosphate uptake regulator 1477 587 Op 6 41/0.000 - CDS 1533898 - 1534647 330 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 1534666 - 1534713 14.6 1478 588 Op 1 38/0.000 - CDS 1534723 - 1535586 1077 ## COG0581 ABC-type phosphate transport system, permease component 1479 588 Op 2 39/0.000 - CDS 1535579 - 1536472 788 ## COG0573 ABC-type phosphate transport system, permease component 1480 588 Op 3 . - CDS 1536473 - 1537399 1310 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 1537455 - 1537514 5.6 + Prom 1537466 - 1537525 5.6 1481 589 Op 1 . + CDS 1537634 - 1538227 594 ## bpr_I0833 TetR family transcriptional regulator 1482 589 Op 2 . + CDS 1538227 - 1538991 666 ## COG2820 Uridine phosphorylase + Term 1539000 - 1539042 8.1 - Term 1538987 - 1539029 8.1 1483 590 Op 1 . - CDS 1539044 - 1539553 243 ## PROTEIN SUPPORTED gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase 1484 590 Op 2 . - CDS 1539556 - 1540014 313 ## gi|225569392|ref|ZP_03778417.1| hypothetical protein CLOHYLEM_05476 1485 591 Op 1 . - CDS 1540118 - 1541002 1025 ## COG1284 Uncharacterized conserved protein - Prom 1541044 - 1541103 8.9 1486 591 Op 2 . - CDS 1541121 - 1541828 747 ## COG2357 Uncharacterized protein conserved in bacteria - Prom 1541869 - 1541928 9.4 1487 592 Tu 1 . - CDS 1541949 - 1542497 525 ## COG2109 ATP:corrinoid adenosyltransferase - Prom 1542517 - 1542576 3.9 - Term 1542616 - 1542662 12.1 1488 593 Tu 1 . - CDS 1542672 - 1543736 1440 ## COG3641 Predicted membrane protein, putative toxin regulator - Prom 1543874 - 1543933 4.4 + Prom 1543866 - 1543925 7.8 1489 594 Tu 1 . + CDS 1544013 - 1545107 964 ## COG1509 Lysine 2,3-aminomutase + Term 1545126 - 1545184 17.0 - Term 1545117 - 1545142 -0.5 1490 595 Tu 1 . - CDS 1545149 - 1545685 556 ## COG1827 Predicted small molecule binding protein (contains 3H domain) - Prom 1545790 - 1545849 6.7 1491 596 Tu 1 . - CDS 1546102 - 1548375 149 ## COG3291 FOG: PKD repeat - Term 1548543 - 1548577 7.6 1492 597 Op 1 . - CDS 1548672 - 1550297 1309 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 1493 597 Op 2 . - CDS 1550167 - 1552806 1419 ## COG3291 FOG: PKD repeat - Prom 1552846 - 1552905 3.3 - Term 1552856 - 1552917 12.1 1494 598 Tu 1 . - CDS 1552921 - 1553610 653 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1553818 - 1553877 6.3 + Prom 1553818 - 1553877 5.4 1495 599 Tu 1 . + CDS 1553921 - 1554184 388 ## bpr_I0194 hypothetical protein + Term 1554200 - 1554241 11.1 - Term 1554188 - 1554229 7.3 1496 600 Op 1 . - CDS 1554251 - 1555669 191 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 1497 600 Op 2 . - CDS 1555632 - 1557143 1365 ## Closa_2183 hypothetical protein 1498 600 Op 3 . - CDS 1557140 - 1557862 315 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 1557983 - 1558042 11.2 + Prom 1557954 - 1558013 8.8 1499 601 Op 1 5/0.024 + CDS 1558041 - 1558361 298 ## COG1695 Predicted transcriptional regulators 1500 601 Op 2 . + CDS 1558354 - 1558944 701 ## COG4709 Predicted membrane protein 1501 601 Op 3 . + CDS 1558934 - 1559872 866 ## Cphy_3297 hypothetical protein + Term 1559900 - 1559941 7.1 - Term 1559884 - 1559931 7.2 1502 602 Op 1 . - CDS 1559936 - 1561576 1799 ## COG1283 Na+/phosphate symporter - Prom 1561596 - 1561655 1.9 1503 602 Op 2 . - CDS 1561660 - 1562016 462 ## EUBREC_2431 sporulation protein - Prom 1562068 - 1562127 7.2 - Term 1562051 - 1562095 12.2 1504 603 Op 1 . - CDS 1562141 - 1563145 1083 ## Cphy_0480 stage V sporulation protein AD 1505 603 Op 2 . - CDS 1563201 - 1565924 2554 ## COG0474 Cation transport ATPase - Prom 1565958 - 1566017 2.4 1506 604 Tu 1 . - CDS 1566045 - 1566506 606 ## Cphy_0479 stage V sporulation protein AC 1507 605 Op 1 . - CDS 1566628 - 1567044 352 ## Closa_1564 hypothetical protein 1508 605 Op 2 . - CDS 1567004 - 1567678 593 ## EUBELI_01606 stage V sporulation protein AA 1509 605 Op 3 . - CDS 1567681 - 1567836 209 ## gi|225569421|ref|ZP_03778446.1| hypothetical protein CLOHYLEM_05505 1510 605 Op 4 6/0.016 - CDS 1567911 - 1568624 797 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 1511 605 Op 5 8/0.008 - CDS 1568603 - 1569058 559 ## COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) 1512 605 Op 6 . - CDS 1569059 - 1569370 264 ## COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) - Prom 1569406 - 1569465 2.4 - Term 1569488 - 1569525 6.1 1513 606 Op 1 . - CDS 1569553 - 1570914 1499 ## EUBREC_2575 hypothetical protein 1514 606 Op 2 . - CDS 1570935 - 1571069 188 ## 1515 606 Op 3 . - CDS 1571062 - 1572369 1221 ## COG0285 Folylpolyglutamate synthase 1516 606 Op 4 . - CDS 1572381 - 1574528 2177 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 1517 606 Op 5 . - CDS 1574595 - 1577252 2778 ## COG0525 Valyl-tRNA synthetase - Prom 1577299 - 1577358 8.5 + TRNA 1577696 - 1577768 73.9 # Ala GGC 0 0 1518 607 Tu 1 . - CDS 1578177 - 1579166 318 ## HS_1632 large adhesin - Prom 1579191 - 1579250 2.3 1519 608 Tu 1 . - CDS 1579354 - 1580247 772 ## COG0679 Predicted permeases - Prom 1580290 - 1580349 1.8 1520 609 Op 1 . - CDS 1580381 - 1581184 619 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 1521 609 Op 2 . - CDS 1581210 - 1581704 405 ## COG3663 G:T/U mismatch-specific DNA glycosylase - Prom 1581729 - 1581788 5.0 + Prom 1581778 - 1581837 6.9 1522 610 Op 1 . + CDS 1581982 - 1583022 804 ## COG0502 Biotin synthase and related enzymes 1523 610 Op 2 . + CDS 1583060 - 1584481 1365 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes + Prom 1584484 - 1584543 2.6 1524 611 Op 1 . + CDS 1584584 - 1585798 982 ## COG1160 Predicted GTPases + Prom 1585914 - 1585973 6.8 1525 611 Op 2 . + CDS 1585994 - 1586593 392 ## COG4905 Predicted membrane protein + Term 1586611 - 1586672 22.8 - Term 1586599 - 1586657 20.3 1526 612 Op 1 . - CDS 1586664 - 1586921 399 ## gi|225569439|ref|ZP_03778464.1| hypothetical protein CLOHYLEM_05524 - Prom 1587046 - 1587105 4.5 1527 612 Op 2 . - CDS 1587113 - 1587748 667 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 1587817 - 1587876 7.9 - Term 1587956 - 1587991 7.2 1528 613 Tu 1 . - CDS 1588018 - 1588746 778 ## COG0846 NAD-dependent protein deacetylases, SIR2 family - Prom 1588830 - 1588889 5.0 - Term 1588838 - 1588887 11.5 1529 614 Op 1 . - CDS 1588900 - 1589568 663 ## COG0637 Predicted phosphatase/phosphohexomutase 1530 614 Op 2 2/0.096 - CDS 1589732 - 1590208 630 ## COG1846 Transcriptional regulators 1531 614 Op 3 . - CDS 1590254 - 1591321 986 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 1532 614 Op 4 . - CDS 1591332 - 1593044 1551 ## COG0825 Acetyl-CoA carboxylase alpha subunit 1533 614 Op 5 4/0.036 - CDS 1593057 - 1594391 1535 ## COG0439 Biotin carboxylase 1534 614 Op 6 4/0.036 - CDS 1594401 - 1594820 447 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 1535 614 Op 7 4/0.036 - CDS 1594851 - 1595318 533 ## COG0511 Biotin carboxyl carrier protein 1536 614 Op 8 11/0.004 - CDS 1595335 - 1596573 1221 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 1537 614 Op 9 26/0.000 - CDS 1596606 - 1597343 236 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1538 614 Op 10 3/0.052 - CDS 1597328 - 1598305 1180 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 1539 614 Op 11 4/0.036 - CDS 1598298 - 1599236 1258 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 1540 614 Op 12 6/0.016 - CDS 1599264 - 1599467 356 ## COG0236 Acyl carrier protein - Prom 1599501 - 1599560 2.3 1541 615 Tu 1 . - CDS 1599577 - 1600539 993 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III - Prom 1600610 - 1600669 11.1 1542 616 Op 1 . - CDS 1600702 - 1601214 202 ## Acfer_0575 heteropolysaccharide repeat-containing protein 1543 616 Op 2 . - CDS 1601261 - 1601548 226 ## BC5266 heteropolysaccharide repeat-containing protein - Prom 1601581 - 1601640 5.6 - Term 1601995 - 1602034 3.7 1544 617 Tu 1 . - CDS 1602124 - 1602411 71 ## gi|225569457|ref|ZP_03778482.1| hypothetical protein CLOHYLEM_05542 - Prom 1602455 - 1602514 5.6 - Term 1603128 - 1603159 -0.5 1545 618 Op 1 . - CDS 1603309 - 1604382 335 ## CPF_0915 putative polysaccharide polymerase protein 1546 618 Op 2 8/0.008 - CDS 1604386 - 1604769 279 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 1604862 - 1604921 8.1 1547 619 Op 1 8/0.008 - CDS 1604941 - 1605996 484 ## COG0438 Glycosyltransferase 1548 619 Op 2 2/0.096 - CDS 1606014 - 1606982 571 ## COG0451 Nucleoside-diphosphate-sugar epimerases 1549 619 Op 3 1/0.168 - CDS 1606998 - 1607588 233 ## COG0279 Phosphoheptose isomerase 1550 619 Op 4 1/0.168 - CDS 1607642 - 1608886 253 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 1551 619 Op 5 . - CDS 1608898 - 1609902 478 ## COG2605 Predicted kinase related to galactokinase and mevalonate kinase 1552 619 Op 6 . - CDS 1609951 - 1610919 232 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis - Prom 1611127 - 1611186 5.9 1553 620 Op 1 . - CDS 1611375 - 1612817 898 ## COG1316 Transcriptional regulator 1554 620 Op 2 . - CDS 1612833 - 1613537 705 ## gi|225569467|ref|ZP_03778492.1| hypothetical protein CLOHYLEM_05552 1555 620 Op 3 5/0.024 - CDS 1613551 - 1614237 748 ## COG0489 ATPases involved in chromosome partitioning 1556 620 Op 4 2/0.096 - CDS 1614252 - 1615025 906 ## COG3944 Capsular polysaccharide biosynthesis protein 1557 620 Op 5 . - CDS 1615012 - 1615749 643 ## COG4464 Capsular polysaccharide biosynthesis protein - Prom 1615873 - 1615932 11.0 - Term 1615912 - 1615941 -0.2 1558 621 Op 1 . - CDS 1615995 - 1616594 451 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 1559 621 Op 2 9/0.008 - CDS 1616674 - 1617540 1038 ## COG1760 L-serine deaminase 1560 621 Op 3 . - CDS 1617563 - 1618243 801 ## COG1760 L-serine deaminase - Prom 1618274 - 1618333 7.9 + Prom 1618233 - 1618292 6.6 1561 622 Op 1 . + CDS 1618412 - 1619320 410 ## Cthe_1430 hypothetical protein 1562 622 Op 2 . + CDS 1619317 - 1620195 525 ## Clocel_1217 hypothetical protein + Prom 1620229 - 1620288 2.6 1563 623 Tu 1 . + CDS 1620313 - 1621434 1186 ## bpr_I2100 hypothetical protein + Term 1621459 - 1621496 -0.9 + TRNA 1621498 - 1621580 60.8 # Leu CAG 0 0 - Term 1621580 - 1621626 11.0 1564 624 Op 1 . - CDS 1621690 - 1622235 433 ## COG0350 Methylated DNA-protein cysteine methyltransferase 1565 624 Op 2 . - CDS 1622311 - 1622904 461 ## gi|225569479|ref|ZP_03778504.1| hypothetical protein CLOHYLEM_05565 - Prom 1622949 - 1623008 4.6 - Term 1622980 - 1623029 9.4 1566 625 Op 1 . - CDS 1623078 - 1623674 674 ## FMG_0299 hypothetical protein 1567 625 Op 2 . - CDS 1623664 - 1623864 190 ## gi|225569482|ref|ZP_03778507.1| hypothetical protein CLOHYLEM_05568 1568 625 Op 3 . - CDS 1623877 - 1623969 221 ## - Prom 1624129 - 1624188 6.9 + Prom 1624083 - 1624142 6.2 1569 626 Tu 1 . + CDS 1624163 - 1624894 765 ## COG3103 SH3 domain protein + Term 1624907 - 1624955 10.1 - Term 1624898 - 1624939 9.4 1570 627 Tu 1 . - CDS 1624987 - 1625133 194 ## - Prom 1625166 - 1625225 10.5 + Prom 1625135 - 1625194 5.4 1571 628 Tu 1 . + CDS 1625230 - 1625394 226 ## gi|225569485|ref|ZP_03778510.1| hypothetical protein CLOHYLEM_05571 + Prom 1625405 - 1625464 2.9 1572 629 Tu 1 . + CDS 1625502 - 1626302 595 ## gi|225569486|ref|ZP_03778511.1| hypothetical protein CLOHYLEM_05572 1573 630 Op 1 . - CDS 1626289 - 1627146 965 ## Blon_1431 hypothetical protein 1574 630 Op 2 41/0.000 - CDS 1627179 - 1628108 1081 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 1575 630 Op 3 . - CDS 1628125 - 1628844 190 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 1628918 - 1628977 6.3 - Term 1628977 - 1629026 17.0 1576 631 Tu 1 . - CDS 1629040 - 1631199 1622 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain - Prom 1631259 - 1631318 8.1 + Prom 1631231 - 1631290 6.1 1577 632 Tu 1 . + CDS 1631448 - 1632299 556 ## COG1408 Predicted phosphohydrolases 1578 633 Op 1 10/0.008 - CDS 1632403 - 1633050 669 ## COG2376 Dihydroxyacetone kinase 1579 633 Op 2 . - CDS 1633052 - 1634041 771 ## COG2376 Dihydroxyacetone kinase 1580 633 Op 3 1/0.168 - CDS 1634088 - 1634960 911 ## COG0191 Fructose/tagatose bisphosphate aldolase 1581 633 Op 4 . - CDS 1634989 - 1636482 1240 ## COG1070 Sugar (pentulose and hexulose) kinases 1582 633 Op 5 2/0.096 - CDS 1636504 - 1637517 979 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1583 633 Op 6 3/0.052 - CDS 1637531 - 1638598 767 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1584 633 Op 7 21/0.000 - CDS 1638615 - 1639589 1130 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1585 633 Op 8 16/0.000 - CDS 1639665 - 1641155 210 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 1641178 - 1641237 1.6 - Term 1641180 - 1641214 4.0 1586 633 Op 9 . - CDS 1641253 - 1642254 1035 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 1642398 - 1642457 8.8 + Prom 1642327 - 1642386 10.4 1587 634 Tu 1 . + CDS 1642568 - 1643344 490 ## COG1349 Transcriptional regulators of sugar metabolism + Term 1643415 - 1643461 9.0 - Term 1643538 - 1643577 4.2 1588 635 Op 1 . - CDS 1643603 - 1646983 2085 ## gi|225569504|ref|ZP_03778529.1| hypothetical protein CLOHYLEM_05590 1589 635 Op 2 24/0.000 - CDS 1647041 - 1647616 178 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 1590 635 Op 3 21/0.000 - CDS 1647620 - 1648405 616 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1591 635 Op 4 . - CDS 1648380 - 1649384 1117 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Prom 1649410 - 1649469 5.9 - TRNA 1649593 - 1649672 65.2 # Leu TAG 0 0 1592 636 Tu 1 . + CDS 1649727 - 1649834 75 ## + Term 1650079 - 1650105 -0.6 - TRNA 1649744 - 1649816 83.7 # Lys TTT 0 0 - TRNA 1649826 - 1649897 70.6 # Gln TTG 0 0 - TRNA 1649907 - 1649980 67.8 # His GTG 0 0 - TRNA 1650048 - 1650121 79.2 # Arg TCT 0 0 - TRNA 1650187 - 1650257 75.8 # Gly TCC 0 0 - TRNA 1650265 - 1650339 85.3 # Pro TGG 0 0 1593 637 Tu 1 . - CDS 1650464 - 1650775 319 ## COG0622 Predicted phosphoesterase - Prom 1650893 - 1650952 4.9 1594 638 Op 1 . - CDS 1650956 - 1651576 364 ## PROTEIN SUPPORTED gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase 1595 638 Op 2 . - CDS 1651573 - 1652748 977 ## COG0116 Predicted N6-adenine-specific DNA methylase - Prom 1652775 - 1652834 6.8 - Term 1652877 - 1652911 6.0 1596 639 Tu 1 . - CDS 1652931 - 1653131 270 ## - Prom 1653206 - 1653265 8.8 + Prom 1653203 - 1653262 10.5 1597 640 Tu 1 . + CDS 1653374 - 1653700 217 ## Thit_1098 sporulation transcriptional activator Spo0A + Term 1653879 - 1653925 9.1 - Term 1653875 - 1653905 1.9 1598 641 Op 1 . - CDS 1654017 - 1654556 441 ## COG4739 Uncharacterized protein containing a ferredoxin domain 1599 641 Op 2 . - CDS 1654619 - 1655026 295 ## COG1846 Transcriptional regulators - Prom 1655058 - 1655117 8.7 - Term 1655138 - 1655166 2.3 1600 642 Op 1 . - CDS 1655167 - 1655487 258 ## gi|225569516|ref|ZP_03778541.1| hypothetical protein CLOHYLEM_05609 1601 642 Op 2 . - CDS 1655405 - 1655632 180 ## gi|167759974|ref|ZP_02432101.1| hypothetical protein CLOSCI_02346 - Prom 1655674 - 1655733 5.1 - Term 1655656 - 1655720 15.4 1602 643 Tu 1 . - CDS 1655750 - 1657861 2205 ## COG3968 Uncharacterized protein related to glutamine synthetase - Prom 1658020 - 1658079 6.8 - Term 1657964 - 1658015 11.7 1603 644 Op 1 . - CDS 1658081 - 1658944 1258 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 1659009 - 1659068 4.8 1604 644 Op 2 . - CDS 1659075 - 1660130 1002 ## COG1609 Transcriptional regulators - Prom 1660165 - 1660224 5.8 1605 645 Op 1 . - CDS 1660255 - 1660686 380 ## Mahau_1308 Glyoxalase/bleomycin resistance protein/dioxygenase 1606 645 Op 2 . - CDS 1660665 - 1661480 681 ## Calow_0353 amidohydrolase 2 1607 645 Op 3 . - CDS 1661481 - 1662218 461 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 1608 645 Op 4 . - CDS 1662196 - 1663155 801 ## COG0524 Sugar kinases, ribokinase family 1609 645 Op 5 . - CDS 1663152 - 1663952 830 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1610 645 Op 6 . - CDS 1663962 - 1665251 1507 ## gi|225569525|ref|ZP_03778550.1| hypothetical protein CLOHYLEM_05618 1611 645 Op 7 24/0.000 - CDS 1665276 - 1666073 975 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1612 645 Op 8 . - CDS 1666073 - 1666882 248 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 1613 645 Op 9 2/0.096 - CDS 1666879 - 1667754 834 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 1614 645 Op 10 . - CDS 1667726 - 1668649 876 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 1615 645 Op 11 . - CDS 1668643 - 1669710 932 ## COG1609 Transcriptional regulators - Prom 1669767 - 1669826 11.6 - Term 1669973 - 1670012 -0.8 1616 646 Tu 1 . - CDS 1670204 - 1671079 700 ## HS_1632 large adhesin - Prom 1671103 - 1671162 4.5 - TRNA 1671384 - 1671455 63.5 # Glu CTC 0 0 - Term 1671327 - 1671374 14.4 1617 647 Op 1 . - CDS 1671529 - 1672902 1357 ## COG0733 Na+-dependent transporters of the SNF family 1618 647 Op 2 . - CDS 1672918 - 1673907 1061 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 1673934 - 1673993 3.0 - Term 1673925 - 1673952 0.1 1619 648 Op 1 2/0.096 - CDS 1674001 - 1674258 325 ## COG1925 Phosphotransferase system, HPr-related proteins 1620 648 Op 2 . - CDS 1674270 - 1675151 893 ## COG1481 Uncharacterized protein conserved in bacteria 1621 648 Op 3 1/0.168 - CDS 1675187 - 1676068 929 ## COG1660 Predicted P-loop-containing kinase 1622 648 Op 4 . - CDS 1676070 - 1676981 973 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 1677027 - 1677086 6.7 + Prom 1676949 - 1677008 7.8 1623 649 Tu 1 . + CDS 1677139 - 1678416 1388 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 1678430 - 1678484 15.4 - Term 1678424 - 1678465 11.3 1624 650 Tu 1 . - CDS 1678468 - 1679178 967 ## gi|225569539|ref|ZP_03778564.1| hypothetical protein CLOHYLEM_05633 - Prom 1679241 - 1679300 6.5 + Prom 1679253 - 1679312 4.0 1625 651 Tu 1 . + CDS 1679361 - 1681364 1545 ## Spico_0262 tetratricopeptide TPR_4 + Term 1681385 - 1681442 19.1 - Term 1681375 - 1681429 20.3 1626 652 Op 1 . - CDS 1681447 - 1681689 291 ## gi|225569541|ref|ZP_03778566.1| hypothetical protein CLOHYLEM_05635 - Prom 1681729 - 1681788 4.4 1627 652 Op 2 . - CDS 1681797 - 1682558 903 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 1682585 - 1682644 5.6 1628 653 Op 1 . - CDS 1682650 - 1683585 1092 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 1629 653 Op 2 . - CDS 1683595 - 1684644 1278 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1630 653 Op 3 1/0.168 - CDS 1684647 - 1686161 1520 ## COG1070 Sugar (pentulose and hexulose) kinases 1631 653 Op 4 1/0.168 - CDS 1686185 - 1687036 1164 ## COG0191 Fructose/tagatose bisphosphate aldolase 1632 653 Op 5 1/0.168 - CDS 1687039 - 1687833 1008 ## COG1349 Transcriptional regulators of sugar metabolism 1633 653 Op 6 3/0.052 - CDS 1687868 - 1688545 616 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 1688601 - 1688660 5.7 - Term 1688736 - 1688790 4.1 1634 654 Op 1 . - CDS 1688804 - 1690339 1822 ## COG1070 Sugar (pentulose and hexulose) kinases 1635 654 Op 2 . - CDS 1690373 - 1691401 927 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 1691489 - 1691548 6.7 1636 655 Op 1 1/0.168 - CDS 1691563 - 1692432 873 ## COG1082 Sugar phosphate isomerases/epimerases 1637 655 Op 2 1/0.168 - CDS 1692491 - 1693891 1549 ## COG1070 Sugar (pentulose and hexulose) kinases 1638 655 Op 3 . - CDS 1693908 - 1695443 1488 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 1695490 - 1695549 7.0 + Prom 1695544 - 1695603 4.1 1639 656 Op 1 . + CDS 1695639 - 1696385 596 ## COG1349 Transcriptional regulators of sugar metabolism + Term 1696392 - 1696423 3.5 1640 656 Op 2 . + CDS 1696439 - 1697116 861 ## COG0176 Transaldolase 1641 657 Op 1 . - CDS 1697113 - 1698147 957 ## COG1609 Transcriptional regulators 1642 657 Op 2 11/0.004 - CDS 1698160 - 1700544 2450 ## COG1882 Pyruvate-formate lyase 1643 657 Op 3 . - CDS 1700603 - 1701469 927 ## COG1180 Pyruvate-formate lyase-activating enzyme 1644 657 Op 4 . - CDS 1701469 - 1702977 1534 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 1703003 - 1703062 4.3 + Prom 1703024 - 1703083 9.2 1645 658 Op 1 . + CDS 1703145 - 1703888 624 ## COG0789 Predicted transcriptional regulators 1646 658 Op 2 45/0.000 + CDS 1703958 - 1704692 316 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 1647 658 Op 3 . + CDS 1704679 - 1705422 823 ## COG0842 ABC-type multidrug transport system, permease component + Term 1705452 - 1705499 16.7 - Term 1705438 - 1705487 17.1 1648 659 Op 1 1/0.168 - CDS 1705512 - 1706531 1220 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1649 659 Op 2 . - CDS 1706557 - 1707657 1071 ## COG1940 Transcriptional regulator/sugar kinase - Prom 1707772 - 1707831 8.3 1650 660 Op 1 21/0.000 - CDS 1707834 - 1708781 1051 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1651 660 Op 2 16/0.000 - CDS 1708778 - 1710292 192 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 1652 660 Op 3 3/0.052 - CDS 1710378 - 1711403 933 ## COG1879 ABC-type sugar transport system, periplasmic component 1653 660 Op 4 10/0.008 - CDS 1711473 - 1712249 233 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 1712437 - 1712496 11.3 - Term 1712335 - 1712361 1.0 1654 661 Op 1 1/0.168 - CDS 1712591 - 1713640 1507 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1655 661 Op 2 . - CDS 1713668 - 1714840 1131 ## COG1940 Transcriptional regulator/sugar kinase - Prom 1714926 - 1714985 9.7 1656 662 Op 1 . - CDS 1715017 - 1716102 950 ## COG0006 Xaa-Pro aminopeptidase 1657 662 Op 2 . - CDS 1716117 - 1717181 1270 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 1717245 - 1717304 6.4 - Term 1717344 - 1717377 3.1 1658 663 Tu 1 . - CDS 1717421 - 1718359 897 ## BALH_3339 triple helix repeat-containing collagen + Prom 1718490 - 1718549 9.6 1659 664 Tu 1 . + CDS 1718770 - 1718904 67 ## gi|225569576|ref|ZP_03778601.1| hypothetical protein CLOHYLEM_05670 - Term 1718814 - 1718856 0.3 1660 665 Tu 1 . - CDS 1718912 - 1719799 913 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1719844 - 1719903 5.6 + Prom 1719839 - 1719898 4.2 1661 666 Tu 1 . + CDS 1719993 - 1723265 2577 ## BVU_0750 TPR domain-containing protein + Term 1723270 - 1723316 13.1 - Term 1723257 - 1723303 13.1 1662 667 Op 1 . - CDS 1723318 - 1724001 677 ## gi|225569579|ref|ZP_03778604.1| hypothetical protein CLOHYLEM_05673 1663 667 Op 2 . - CDS 1724032 - 1724793 947 ## COG1349 Transcriptional regulators of sugar metabolism 1664 667 Op 3 . - CDS 1724833 - 1725336 613 ## Cphy_0345 hypothetical protein - Prom 1725370 - 1725429 3.2 - Term 1725346 - 1725400 7.6 1665 668 Op 1 . - CDS 1725432 - 1726481 1234 ## MS0384 2-keto-3-deoxygluconate permease 1666 668 Op 2 3/0.052 - CDS 1726503 - 1727846 1663 ## COG3395 Uncharacterized protein conserved in bacteria 1667 668 Op 3 . - CDS 1727879 - 1728898 447 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 - Prom 1729105 - 1729164 6.0 1668 669 Tu 1 . + CDS 1729246 - 1729992 840 ## COG0149 Triosephosphate isomerase + Term 1730009 - 1730063 21.0 - Term 1729998 - 1730049 19.0 1669 670 Op 1 . - CDS 1730062 - 1730901 832 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - Prom 1730925 - 1730984 2.1 - Term 1730930 - 1730986 20.0 1670 670 Op 2 . - CDS 1731006 - 1732751 2163 ## COG2376 Dihydroxyacetone kinase - Prom 1732779 - 1732838 4.8 1671 671 Op 1 . - CDS 1732896 - 1733477 546 ## COG2755 Lysophospholipase L1 and related esterases 1672 671 Op 2 . - CDS 1733494 - 1734495 1144 ## COG0095 Lipoate-protein ligase A 1673 671 Op 3 . - CDS 1734485 - 1736035 2028 ## COG1070 Sugar (pentulose and hexulose) kinases 1674 671 Op 4 30/0.000 - CDS 1736048 - 1737439 711 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 1675 671 Op 5 . - CDS 1737457 - 1738719 1187 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 1676 671 Op 6 . - CDS 1738734 - 1739648 1154 ## COG0191 Fructose/tagatose bisphosphate aldolase 1677 671 Op 7 28/0.000 - CDS 1739682 - 1740695 1170 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 1678 671 Op 8 . - CDS 1740695 - 1741678 983 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - Prom 1741758 - 1741817 6.6 + Prom 1741702 - 1741761 7.3 1679 672 Tu 1 . + CDS 1741943 - 1742734 749 ## COG1349 Transcriptional regulators of sugar metabolism - Term 1742723 - 1742759 -0.7 1680 673 Op 1 . - CDS 1742779 - 1743447 711 ## COG0406 Fructose-2,6-bisphosphatase 1681 673 Op 2 . - CDS 1743454 - 1744206 1032 ## gi|225569600|ref|ZP_03778625.1| hypothetical protein CLOHYLEM_05694 - Prom 1744275 - 1744334 3.7 1682 674 Tu 1 . - CDS 1744367 - 1745254 1152 ## Rru_A1362 xylose isomerase-like TIM barrel - Prom 1745363 - 1745422 4.8 - Term 1745366 - 1745414 12.1 1683 675 Op 1 . - CDS 1745465 - 1746511 1462 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1684 675 Op 2 . - CDS 1746547 - 1747191 693 ## COG0554 Glycerol kinase - Prom 1747260 - 1747319 80.4 1685 676 Op 1 . - CDS 1747331 - 1747513 137 ## GYMC10_3004 transketolase domain protein 1686 676 Op 2 . - CDS 1747521 - 1747586 95 ## - Prom 1747621 - 1747680 80.4 1687 677 Op 1 2/0.096 - CDS 1747692 - 1748198 671 ## COG3959 Transketolase, N-terminal subunit 1688 677 Op 2 21/0.000 - CDS 1748240 - 1749226 1327 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1689 677 Op 3 16/0.000 - CDS 1749241 - 1750728 1778 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 1750867 - 1750926 4.4 - Term 1750933 - 1750994 17.0 1690 677 Op 4 . - CDS 1751045 - 1752121 1163 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 1752353 - 1752412 9.7 - Term 1752389 - 1752456 13.1 1691 678 Op 1 . - CDS 1752468 - 1753481 1095 ## COG1609 Transcriptional regulators 1692 678 Op 2 . - CDS 1753513 - 1754391 952 ## COG1737 Transcriptional regulators - Prom 1754476 - 1754535 10.5 + Prom 1754512 - 1754571 8.7 1693 679 Op 1 12/0.004 + CDS 1754636 - 1755571 946 ## COG3958 Transketolase, C-terminal subunit 1694 679 Op 2 . + CDS 1755581 - 1756411 794 ## COG3959 Transketolase, N-terminal subunit 1695 679 Op 3 . + CDS 1756426 - 1757952 1144 ## COG1070 Sugar (pentulose and hexulose) kinases 1696 679 Op 4 . + CDS 1758016 - 1758702 709 ## COG1878 Predicted metal-dependent hydrolase + Term 1758706 - 1758763 24.1 - Term 1758693 - 1758750 24.1 1697 680 Op 1 . - CDS 1758754 - 1759737 414 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 1698 680 Op 2 . - CDS 1759766 - 1760344 227 ## SpiBuddy_2171 hypothetical protein - Prom 1760383 - 1760442 5.7 - Term 1760410 - 1760462 12.7 1699 681 Op 1 10/0.008 - CDS 1760485 - 1761129 905 ## COG2376 Dihydroxyacetone kinase 1700 681 Op 2 2/0.096 - CDS 1761159 - 1762154 1215 ## COG2376 Dihydroxyacetone kinase 1701 681 Op 3 3/0.052 - CDS 1762184 - 1762951 222 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1702 681 Op 4 16/0.000 - CDS 1763013 - 1763981 1370 ## COG1879 ABC-type sugar transport system, periplasmic component 1703 681 Op 5 21/0.000 - CDS 1764050 - 1765009 1211 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1704 681 Op 6 . - CDS 1765027 - 1766508 1648 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 1766631 - 1766690 6.0 + Prom 1766583 - 1766642 6.6 1705 682 Tu 1 . + CDS 1766837 - 1767130 351 ## ELI_0302 hypothetical protein + Prom 1767159 - 1767218 4.9 1706 683 Tu 1 . + CDS 1767238 - 1767804 302 ## COG4332 Uncharacterized protein conserved in bacteria + Term 1767869 - 1767907 -0.4 - Term 1767698 - 1767734 1.4 1707 684 Op 1 7/0.008 - CDS 1767791 - 1769371 1835 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 1708 684 Op 2 . - CDS 1769375 - 1771168 2058 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 1771285 - 1771344 5.4 + Prom 1771038 - 1771097 4.7 1709 685 Tu 1 . + CDS 1771319 - 1773805 1834 ## gi|225569630|ref|ZP_03778655.1| hypothetical protein CLOHYLEM_05724 + Term 1773816 - 1773852 6.3 - Term 1773795 - 1773852 6.9 1710 686 Op 1 . - CDS 1773914 - 1775401 931 ## ELI_2097 regulatory protein GntR 1711 686 Op 2 . - CDS 1775421 - 1778012 1815 ## COG0642 Signal transduction histidine kinase 1712 686 Op 3 . - CDS 1778045 - 1780102 1599 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 1780133 - 1780192 5.3 - Term 1780208 - 1780266 14.4 1713 687 Op 1 . - CDS 1780286 - 1781296 1123 ## COG0673 Predicted dehydrogenases and related proteins - Prom 1781342 - 1781401 2.6 1714 687 Op 2 . - CDS 1781407 - 1783149 2234 ## COG2376 Dihydroxyacetone kinase 1715 687 Op 3 . - CDS 1783175 - 1783738 672 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 1716 687 Op 4 . - CDS 1783752 - 1784636 1093 ## Rru_A1362 xylose isomerase-like TIM barrel 1717 687 Op 5 21/0.000 - CDS 1784692 - 1785693 1339 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1718 687 Op 6 16/0.000 - CDS 1785714 - 1787195 1607 ## COG1129 ABC-type sugar transport system, ATPase component - Term 1787206 - 1787260 3.5 1719 687 Op 7 16/0.000 - CDS 1787280 - 1788266 1283 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 1788307 - 1788366 6.7 1720 687 Op 8 . - CDS 1788395 - 1789783 1556 ## COG1129 ABC-type sugar transport system, ATPase component 1721 687 Op 9 7/0.008 - CDS 1789788 - 1790738 1001 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 1790760 - 1790819 6.6 1722 688 Tu 1 . - CDS 1790847 - 1792451 1823 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 1792502 - 1792561 6.4 - Term 1792554 - 1792610 20.0 1723 689 Op 1 . - CDS 1792614 - 1793381 647 ## COG4126 Hydantoin racemase 1724 689 Op 2 . - CDS 1793402 - 1794469 1202 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 1725 689 Op 3 . - CDS 1794481 - 1795287 799 ## COG0388 Predicted amidohydrolase 1726 689 Op 4 . - CDS 1795316 - 1796725 1351 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1727 689 Op 5 . - CDS 1796747 - 1797793 967 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 1728 689 Op 6 . - CDS 1797798 - 1798847 1047 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 1729 689 Op 7 44/0.000 - CDS 1798844 - 1799842 964 ## COG4608 ABC-type oligopeptide transport system, ATPase component 1730 689 Op 8 44/0.000 - CDS 1799842 - 1800828 503 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 1731 689 Op 9 49/0.000 - CDS 1800829 - 1801692 1173 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1732 689 Op 10 38/0.000 - CDS 1801705 - 1802727 262 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 1733 689 Op 11 . - CDS 1802763 - 1804418 2022 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 1804452 - 1804511 7.9 + Prom 1804519 - 1804578 9.2 1734 690 Tu 1 . + CDS 1804610 - 1805518 704 ## COG0583 Transcriptional regulator - Term 1805262 - 1805309 8.7 1735 691 Tu 1 . - CDS 1805472 - 1806167 542 ## COG0655 Multimeric flavodoxin WrbA - Prom 1806224 - 1806283 5.2 - Term 1806252 - 1806322 15.2 1736 692 Op 1 . - CDS 1806352 - 1808115 1904 ## COG2376 Dihydroxyacetone kinase 1737 692 Op 2 1/0.168 - CDS 1808130 - 1809173 1493 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 1809209 - 1809268 5.6 1738 693 Op 1 16/0.000 - CDS 1809340 - 1810332 1497 ## COG1879 ABC-type sugar transport system, periplasmic component 1739 693 Op 2 21/0.000 - CDS 1810350 - 1811297 1300 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1740 693 Op 3 2/0.096 - CDS 1811297 - 1812823 1819 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 1812965 - 1813024 7.3 - Term 1813051 - 1813083 3.2 1741 694 Op 1 . - CDS 1813116 - 1814564 1607 ## COG1129 ABC-type sugar transport system, ATPase component 1742 694 Op 2 7/0.008 - CDS 1814539 - 1815579 1193 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 1743 694 Op 3 . - CDS 1815593 - 1817203 1786 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 1817237 - 1817296 9.3 - Term 1817362 - 1817400 9.3 1744 695 Tu 1 . - CDS 1817432 - 1817872 552 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 1817913 - 1817972 4.8 1745 696 Op 1 . - CDS 1818028 - 1819458 1061 ## COG2195 Di- and tripeptidases 1746 696 Op 2 . - CDS 1819462 - 1820496 990 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 1747 696 Op 3 44/0.000 - CDS 1820525 - 1821520 1063 ## COG4608 ABC-type oligopeptide transport system, ATPase component 1748 696 Op 4 44/0.000 - CDS 1821527 - 1822501 508 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 1749 696 Op 5 49/0.000 - CDS 1822501 - 1823364 872 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1750 696 Op 6 38/0.000 - CDS 1823379 - 1824395 288 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 1751 696 Op 7 . - CDS 1824422 - 1826071 1900 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 1826106 - 1826165 5.2 + Prom 1826110 - 1826169 10.4 1752 697 Tu 1 . + CDS 1826215 - 1827849 875 ## COG2508 Regulator of polyketide synthase expression - Term 1827687 - 1827717 -0.4 1753 698 Tu 1 . - CDS 1827858 - 1828901 1053 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) - Prom 1829122 - 1829181 14.6 1754 699 Tu 1 . + CDS 1829486 - 1832281 1397 ## COG3291 FOG: PKD repeat + Term 1832316 - 1832366 15.4 - Term 1832449 - 1832499 -0.1 1755 700 Op 1 . - CDS 1832520 - 1833569 1346 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1756 700 Op 2 12/0.004 - CDS 1833579 - 1834529 1254 ## COG3958 Transketolase, C-terminal subunit 1757 700 Op 3 1/0.168 - CDS 1834532 - 1835374 973 ## COG3959 Transketolase, N-terminal subunit 1758 700 Op 4 10/0.008 - CDS 1835409 - 1836176 196 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1759 700 Op 5 1/0.168 - CDS 1836210 - 1837250 1391 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 1837357 - 1837416 7.2 - Term 1837341 - 1837377 5.1 1760 701 Op 1 16/0.000 - CDS 1837419 - 1838423 1077 ## COG1879 ABC-type sugar transport system, periplasmic component 1761 701 Op 2 21/0.000 - CDS 1838501 - 1839496 1394 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1762 701 Op 3 . - CDS 1839501 - 1840988 1717 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 1841175 - 1841234 7.7 + Prom 1841326 - 1841385 11.7 1763 702 Op 1 1/0.168 + CDS 1841457 - 1842413 872 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 1764 702 Op 2 1/0.168 + CDS 1842425 - 1843030 657 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1765 702 Op 3 3/0.052 + CDS 1843056 - 1843880 1018 ## COG1349 Transcriptional regulators of sugar metabolism 1766 702 Op 4 3/0.052 + CDS 1843898 - 1845364 1476 ## COG1070 Sugar (pentulose and hexulose) kinases 1767 702 Op 5 . + CDS 1845407 - 1846219 950 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1768 702 Op 6 . + CDS 1846242 - 1847009 251 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 1847182 - 1847224 11.2 - Term 1847123 - 1847181 6.3 1769 703 Op 1 . - CDS 1847406 - 1848260 618 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 1770 703 Op 2 . - CDS 1848262 - 1848711 596 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 1848744 - 1848803 9.9 + Prom 1848706 - 1848765 8.5 1771 704 Tu 1 . + CDS 1848803 - 1849582 694 ## COG0561 Predicted hydrolases of the HAD superfamily 1772 705 Tu 1 . - CDS 1849528 - 1851000 1457 ## COG2199 FOG: GGDEF domain - Prom 1851030 - 1851089 4.6 1773 706 Op 1 5/0.024 - CDS 1851139 - 1852644 1565 ## COG2160 L-arabinose isomerase 1774 706 Op 2 3/0.052 - CDS 1852680 - 1853378 777 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1775 706 Op 3 . - CDS 1853412 - 1855004 1769 ## COG1070 Sugar (pentulose and hexulose) kinases 1776 706 Op 4 11/0.004 - CDS 1855034 - 1856083 1386 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1777 706 Op 5 21/0.000 - CDS 1856085 - 1857182 1258 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1778 706 Op 6 16/0.000 - CDS 1857169 - 1858710 1749 ## COG1129 ABC-type sugar transport system, ATPase component 1779 706 Op 7 . - CDS 1858813 - 1859802 1242 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 1859858 - 1859917 3.2 + Prom 1860065 - 1860124 8.5 1780 707 Tu 1 . + CDS 1860193 - 1861284 804 ## COG1609 Transcriptional regulators + Term 1861410 - 1861439 -0.2 - Term 1861190 - 1861232 8.0 1781 708 Op 1 . - CDS 1861281 - 1862897 1659 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 1782 708 Op 2 1/0.168 - CDS 1862946 - 1863971 928 ## COG1879 ABC-type sugar transport system, periplasmic component 1783 708 Op 3 . - CDS 1863975 - 1865507 1738 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 1784 708 Op 4 10/0.008 - CDS 1865578 - 1866216 834 ## COG2376 Dihydroxyacetone kinase 1785 708 Op 5 . - CDS 1866228 - 1867223 1341 ## COG2376 Dihydroxyacetone kinase 1786 708 Op 6 . - CDS 1867238 - 1868437 1196 ## Slin_0968 hypothetical protein 1787 708 Op 7 . - CDS 1868450 - 1869862 1676 ## COG2407 L-fucose isomerase and related proteins 1788 708 Op 8 1/0.168 - CDS 1869878 - 1870552 871 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1789 708 Op 9 . - CDS 1870568 - 1871614 1250 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1790 708 Op 10 1/0.168 - CDS 1871607 - 1873112 1285 ## COG1070 Sugar (pentulose and hexulose) kinases 1791 708 Op 11 1/0.168 - CDS 1873125 - 1873991 1147 ## COG0191 Fructose/tagatose bisphosphate aldolase 1792 708 Op 12 2/0.096 - CDS 1874004 - 1875470 960 ## COG1070 Sugar (pentulose and hexulose) kinases 1793 708 Op 13 . - CDS 1875485 - 1876456 982 ## COG0524 Sugar kinases, ribokinase family 1794 708 Op 14 1/0.168 - CDS 1876473 - 1877501 1039 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1795 708 Op 15 . - CDS 1877542 - 1878651 1209 ## COG3839 ABC-type sugar transport systems, ATPase components 1796 708 Op 16 . - CDS 1878669 - 1880462 1733 ## COG2407 L-fucose isomerase and related proteins 1797 708 Op 17 . - CDS 1880515 - 1881279 221 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1798 708 Op 18 . - CDS 1881293 - 1881928 731 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1799 708 Op 19 38/0.000 - CDS 1881964 - 1882836 755 ## COG0395 ABC-type sugar transport system, permease component 1800 708 Op 20 35/0.000 - CDS 1882850 - 1883746 1073 ## COG1175 ABC-type sugar transport systems, permease components 1801 708 Op 21 . - CDS 1883843 - 1885207 1459 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 1885255 - 1885314 2.8 1802 709 Tu 1 . - CDS 1885335 - 1886459 1349 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 1886617 - 1886676 6.2 + Prom 1886587 - 1886646 9.0 1803 710 Op 1 . + CDS 1886708 - 1887043 241 ## CKR_1531 hypothetical protein 1804 710 Op 2 . + CDS 1887126 - 1887914 440 ## COG1349 Transcriptional regulators of sugar metabolism - Term 1887870 - 1887915 4.6 1805 711 Op 1 . - CDS 1888101 - 1889837 2439 ## COG1966 Carbon starvation protein, predicted membrane protein 1806 711 Op 2 . - CDS 1889908 - 1890441 512 ## bpr_I1011 hypothetical protein 1807 711 Op 3 . - CDS 1890419 - 1890484 126 ## - Prom 1890532 - 1890591 5.4 - Term 1890598 - 1890658 28.4 1808 712 Op 1 . - CDS 1890677 - 1891936 1582 ## COG2233 Xanthine/uracil permeases 1809 712 Op 2 . - CDS 1892008 - 1892928 971 ## COG0524 Sugar kinases, ribokinase family 1810 712 Op 3 . - CDS 1892918 - 1894456 1523 ## Amet_1887 peptidase S41 - Prom 1894528 - 1894587 4.5 - Term 1894609 - 1894644 7.4 1811 713 Op 1 30/0.000 - CDS 1894678 - 1895871 1491 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 1895936 - 1895995 4.5 1812 713 Op 2 51/0.000 - CDS 1896008 - 1898077 1966 ## COG0480 Translation elongation factors (GTPases) 1813 713 Op 3 56/0.000 - CDS 1898135 - 1898605 761 ## PROTEIN SUPPORTED gi|240146972|ref|ZP_04745573.1| 30S ribosomal protein S7 - Prom 1898632 - 1898691 1.6 1814 713 Op 4 . - CDS 1898779 - 1899198 661 ## PROTEIN SUPPORTED gi|240146973|ref|ZP_04745574.1| 30S ribosomal protein S12 - Prom 1899286 - 1899345 6.7 1815 714 Tu 1 . - CDS 1899408 - 1900451 1210 ## COG1609 Transcriptional regulators 1816 715 Tu 1 . - CDS 1900839 - 1901966 982 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Term 1901980 - 1902016 10.3 1817 716 Op 1 . - CDS 1902022 - 1902762 796 ## COG5426 Uncharacterized membrane protein 1818 716 Op 2 . - CDS 1902781 - 1904055 1250 ## GM18_1721 dihydroorotase, multifunctional complex type (EC:3.5.2.3) 1819 716 Op 3 . - CDS 1904076 - 1905353 1250 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1820 716 Op 4 . - CDS 1905346 - 1905969 572 ## COG2755 Lysophospholipase L1 and related esterases 1821 716 Op 5 15/0.000 - CDS 1905966 - 1906778 210 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 1822 716 Op 6 34/0.000 - CDS 1906765 - 1907625 337 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1823 716 Op 7 . - CDS 1907613 - 1908407 822 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters - Term 1908419 - 1908461 8.8 1824 716 Op 8 . - CDS 1908467 - 1909048 688 ## Spirs_3925 signal transduction histidine kinase, LytS - Prom 1909202 - 1909261 7.4 1825 717 Tu 1 . - CDS 1909395 - 1909961 930 ## COG2316 Predicted hydrolase (HD superfamily) - Prom 1909991 - 1910050 7.8 + Prom 1910046 - 1910105 7.0 1826 718 Tu 1 . + CDS 1910199 - 1910942 775 ## COG0730 Predicted permeases 1827 719 Op 1 . - CDS 1910914 - 1911948 558 ## gi|225569754|ref|ZP_03778779.1| hypothetical protein CLOHYLEM_05848 1828 719 Op 2 . - CDS 1911945 - 1913321 1493 ## Amet_4741 RND family efflux transporter MFP subunit 1829 719 Op 3 38/0.000 - CDS 1913333 - 1914166 682 ## COG0395 ABC-type sugar transport system, permease component 1830 719 Op 4 . - CDS 1914163 - 1915020 649 ## COG1175 ABC-type sugar transport systems, permease components 1831 719 Op 5 . - CDS 1915038 - 1917173 2065 ## Clole_2648 extracellular solute-binding protein family 1 1832 719 Op 6 . - CDS 1917253 - 1917315 82 ## - Prom 1917351 - 1917410 2.7 - Term 1917379 - 1917436 6.2 1833 720 Tu 1 . - CDS 1917488 - 1917856 205 ## gi|225569759|ref|ZP_03778784.1| hypothetical protein CLOHYLEM_05853 1834 721 Tu 1 . + CDS 1918165 - 1918647 121 ## COG1396 Predicted transcriptional regulators - Term 1918529 - 1918575 4.1 1835 722 Op 1 . - CDS 1918685 - 1919797 1305 ## COG3839 ABC-type sugar transport systems, ATPase components 1836 722 Op 2 . - CDS 1919766 - 1920539 739 ## COG0546 Predicted phosphatases 1837 722 Op 3 . - CDS 1920517 - 1922049 916 ## BcerKBAB4_2798 hypothetical protein 1838 722 Op 4 14/0.000 - CDS 1922055 - 1923353 1389 ## COG1653 ABC-type sugar transport system, periplasmic component 1839 722 Op 5 38/0.000 - CDS 1923407 - 1924315 776 ## COG0395 ABC-type sugar transport system, permease component 1840 722 Op 6 2/0.096 - CDS 1924331 - 1925203 952 ## COG1175 ABC-type sugar transport systems, permease components 1841 722 Op 7 1/0.168 - CDS 1925232 - 1926557 916 ## COG0534 Na+-driven multidrug efflux pump - Prom 1926646 - 1926705 4.8 - Term 1926730 - 1926765 7.2 1842 723 Tu 1 . - CDS 1926792 - 1927841 1295 ## COG0006 Xaa-Pro aminopeptidase - Prom 1927902 - 1927961 2.9 - Term 1927904 - 1927936 1.4 1843 724 Op 1 . - CDS 1927981 - 1928163 219 ## gi|225569769|ref|ZP_03778794.1| hypothetical protein CLOHYLEM_05863 1844 724 Op 2 22/0.000 - CDS 1928184 - 1930373 2814 ## COG0370 Fe2+ transport system protein B 1845 724 Op 3 . - CDS 1930424 - 1930645 281 ## COG1918 Fe2+ transport system protein A 1846 724 Op 4 . - CDS 1930660 - 1930869 293 ## EUBELI_00572 hypothetical protein 1847 724 Op 5 . - CDS 1930894 - 1931136 356 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 1931175 - 1931234 5.8 - Term 1931234 - 1931303 27.5 1848 725 Op 1 58/0.000 - CDS 1931317 - 1934949 4059 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 1849 725 Op 2 . - CDS 1934964 - 1938827 4090 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit - Prom 1938958 - 1939017 5.3 1850 726 Op 1 44/0.000 - CDS 1939030 - 1940052 894 ## COG4608 ABC-type oligopeptide transport system, ATPase component 1851 726 Op 2 44/0.000 - CDS 1940076 - 1941068 600 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 1852 726 Op 3 49/0.000 - CDS 1941079 - 1942014 952 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1853 726 Op 4 38/0.000 - CDS 1942007 - 1942954 925 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 1854 726 Op 5 . - CDS 1942994 - 1944562 1868 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 1944752 - 1944811 14.7 1855 727 Tu 1 . - CDS 1945007 - 1946239 715 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 1946432 - 1946491 2.7 1856 728 Tu 1 . - CDS 1946579 - 1947262 275 ## ELI_1000 plasmid recombination protein - Prom 1947494 - 1947553 3.1 + Prom 1947546 - 1947605 4.2 1857 729 Op 1 . + CDS 1947633 - 1948046 152 ## CDR20291_0527 hypothetical protein 1858 729 Op 2 . + CDS 1948068 - 1948274 264 ## Tresu_1922 helix-turn-helix domain protein 1859 729 Op 3 . + CDS 1948326 - 1948871 303 ## CDR20291_1780 hypothetical protein 1860 729 Op 4 3/0.052 + CDS 1948916 - 1949473 210 ## PROTEIN SUPPORTED gi|229879086|ref|ZP_04498585.1| acetyltransferase, ribosomal protein N-acetylase + Prom 1949501 - 1949560 2.3 1861 730 Op 1 . + CDS 1949584 - 1950078 226 ## PROTEIN SUPPORTED gi|229236536|ref|ZP_04360958.1| acetyltransferase, ribosomal protein N-acetylase 1862 730 Op 2 . + CDS 1950151 - 1950237 57 ## - Term 1950704 - 1950748 7.5 1863 731 Tu 1 . - CDS 1950897 - 1951589 1037 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Prom 1951622 - 1951681 2.9 1864 732 Op 1 . - CDS 1951708 - 1954767 3106 ## COG0668 Small-conductance mechanosensitive channel 1865 732 Op 2 . - CDS 1954779 - 1955576 941 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 1955615 - 1955674 6.4 - Term 1955791 - 1955826 7.1 1866 733 Tu 1 . - CDS 1955847 - 1959218 1862 ## COG3291 FOG: PKD repeat - Prom 1959430 - 1959489 4.9 - Term 1959575 - 1959629 13.5 1867 734 Op 1 55/0.000 - CDS 1959724 - 1960416 985 ## PROTEIN SUPPORTED gi|238916246|ref|YP_002929763.1| large subunit ribosomal protein L1 1868 734 Op 2 45/0.000 - CDS 1960499 - 1960924 647 ## PROTEIN SUPPORTED gi|240143818|ref|ZP_04742419.1| ribosomal protein L11 1869 734 Op 3 . - CDS 1960981 - 1961496 601 ## COG0250 Transcription antiterminator 1870 734 Op 4 . - CDS 1961530 - 1961724 187 ## EUBREC_0372 hypothetical protein 1871 734 Op 5 . - CDS 1961746 - 1961895 236 ## PROTEIN SUPPORTED gi|160881814|ref|YP_001560782.1| ribosomal protein L33 - Prom 1961954 - 1962013 6.0 - Term 1962038 - 1962077 10.5 1872 735 Op 1 2/0.096 - CDS 1962089 - 1962829 799 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 1873 735 Op 2 . - CDS 1962826 - 1963575 762 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 1874 735 Op 3 . - CDS 1963644 - 1965128 1714 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 1875 735 Op 4 . - CDS 1965143 - 1966867 1506 ## COG2508 Regulator of polyketide synthase expression 1876 735 Op 5 . - CDS 1966764 - 1968086 1061 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 1877 735 Op 6 1/0.168 - CDS 1968089 - 1968877 857 ## COG0434 Predicted TIM-barrel enzyme 1878 735 Op 7 . - CDS 1968874 - 1969854 1189 ## COG0524 Sugar kinases, ribokinase family 1879 735 Op 8 . - CDS 1969867 - 1971057 1232 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 1880 735 Op 9 15/0.000 - CDS 1971047 - 1971871 356 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1881 735 Op 10 34/0.000 - CDS 1971884 - 1972729 1073 ## COG1122 ABC-type cobalt transport system, ATPase component 1882 735 Op 11 . - CDS 1972714 - 1973529 718 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 1883 735 Op 12 . - CDS 1973544 - 1974164 843 ## Spirs_3925 signal transduction histidine kinase, LytS - Prom 1974198 - 1974257 4.9 - Term 1974368 - 1974420 21.3 1884 736 Op 1 . - CDS 1974453 - 1975211 1053 ## COG1402 Uncharacterized protein, putative amidase 1885 736 Op 2 . - CDS 1975226 - 1976719 1620 ## COG4145 Na+/panthothenate symporter 1886 736 Op 3 . - CDS 1976719 - 1976991 300 ## Spirs_3016 hypothetical protein - Prom 1977099 - 1977158 9.8 + Prom 1977058 - 1977117 10.7 1887 737 Op 1 . + CDS 1977229 - 1978071 515 ## COG1737 Transcriptional regulators 1888 737 Op 2 . + CDS 1978137 - 1979216 1033 ## Spirs_0032 hypothetical protein - Term 1979236 - 1979286 17.1 1889 738 Op 1 . - CDS 1979330 - 1980475 1284 ## CCC13826_0178 isoaspartyl dipeptidase (EC:3.4.19.5) 1890 738 Op 2 . - CDS 1980560 - 1981411 739 ## COG0789 Predicted transcriptional regulators 1891 738 Op 3 . - CDS 1981446 - 1982186 926 ## Clole_4062 ABC transporter 1892 738 Op 4 . - CDS 1982183 - 1982905 316 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Term 1982964 - 1983005 7.2 1893 739 Op 1 36/0.000 - CDS 1983041 - 1985077 2010 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 1894 739 Op 2 4/0.036 - CDS 1985067 - 1985834 870 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 1985858 - 1985917 6.2 1895 740 Op 1 40/0.000 - CDS 1985958 - 1986977 887 ## COG0642 Signal transduction histidine kinase 1896 740 Op 2 . - CDS 1986974 - 1987639 648 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1987681 - 1987740 7.5 1897 741 Op 1 . - CDS 1987742 - 1987927 83 ## gi|225569826|ref|ZP_03778851.1| hypothetical protein CLOHYLEM_05920 1898 741 Op 2 3/0.052 - CDS 1987924 - 1989426 1615 ## COG1070 Sugar (pentulose and hexulose) kinases 1899 741 Op 3 3/0.052 - CDS 1989444 - 1990496 1233 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 1900 741 Op 4 3/0.052 - CDS 1990511 - 1991164 822 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1901 741 Op 5 3/0.052 - CDS 1991184 - 1992221 1332 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 1902 741 Op 6 5/0.024 - CDS 1992226 - 1993755 1681 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 1993856 - 1993915 6.9 - Term 1993937 - 1993978 6.4 1903 742 Tu 1 . - CDS 1994009 - 1994896 918 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 1994981 - 1995040 8.5 - Term 1995028 - 1995071 10.0 1904 743 Op 1 10/0.008 - CDS 1995101 - 1995739 881 ## COG2376 Dihydroxyacetone kinase 1905 743 Op 2 . - CDS 1995761 - 1996756 1361 ## COG2376 Dihydroxyacetone kinase 1906 743 Op 3 1/0.168 - CDS 1996770 - 1997861 1399 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1907 743 Op 4 5/0.024 - CDS 1997894 - 1999015 1197 ## COG3839 ABC-type sugar transport systems, ATPase components 1908 743 Op 5 21/0.000 - CDS 1999020 - 2000171 1368 ## COG3839 ABC-type sugar transport systems, ATPase components 1909 743 Op 6 38/0.000 - CDS 2000182 - 2001003 900 ## COG0395 ABC-type sugar transport system, permease component 1910 743 Op 7 35/0.000 - CDS 2001049 - 2001987 952 ## COG1175 ABC-type sugar transport systems, permease components - Prom 2002016 - 2002075 8.1 - Term 2002038 - 2002078 6.2 1911 743 Op 8 . - CDS 2002126 - 2003556 1353 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 2003702 - 2003761 7.8 + Prom 2003671 - 2003730 7.5 1912 744 Op 1 . + CDS 2003899 - 2004501 487 ## Closa_0515 hypothetical protein 1913 744 Op 2 . + CDS 2004531 - 2004614 88 ## + Term 2004681 - 2004743 7.9 - Term 2004663 - 2004709 -0.5 1914 745 Op 1 . - CDS 2004854 - 2005939 1479 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1915 745 Op 2 2/0.096 - CDS 2005974 - 2007482 1624 ## COG1070 Sugar (pentulose and hexulose) kinases 1916 745 Op 3 . - CDS 2007507 - 2008376 862 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase - Prom 2008430 - 2008489 9.4 - Term 2008502 - 2008554 15.2 1917 746 Tu 1 . - CDS 2008566 - 2009615 1136 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 2009694 - 2009753 6.7 + Prom 2009752 - 2009811 10.1 1918 747 Tu 1 . + CDS 2009858 - 2010643 749 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 2010664 - 2010737 18.4 - Term 2010467 - 2010502 3.0 1919 748 Tu 1 . - CDS 2010743 - 2011435 749 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 2011529 - 2011588 5.6 1920 749 Tu 1 . - CDS 2011634 - 2011738 241 ## - Prom 2011760 - 2011819 4.2 - Term 2011926 - 2011966 8.3 1921 750 Op 1 . - CDS 2011980 - 2012975 1040 ## bpr_I1973 hypothetical protein 1922 750 Op 2 . - CDS 2013025 - 2013753 542 ## COG1802 Transcriptional regulators 1923 750 Op 3 . - CDS 2013827 - 2015269 1330 ## COG1757 Na+/H+ antiporter 1924 750 Op 4 . - CDS 2015303 - 2016379 694 ## Mahau_2054 NAD/NADP octopine/nopaline dehydrogenase - Prom 2016434 - 2016493 6.6 - Term 2016535 - 2016585 10.8 1925 751 Op 1 . - CDS 2016652 - 2016840 192 ## Tresu_2680 hypothetical protein 1926 751 Op 2 . - CDS 2016842 - 2017366 290 ## Tresu_2679 hypothetical protein - Prom 2017389 - 2017448 8.1 1927 752 Tu 1 . - CDS 2017468 - 2017551 81 ## - Prom 2017597 - 2017656 4.5 - Term 2017625 - 2017670 9.8 1928 753 Op 1 2/0.096 - CDS 2017718 - 2019658 2187 ## COG1190 Lysyl-tRNA synthetase (class II) 1929 753 Op 2 1/0.168 - CDS 2019698 - 2020180 601 ## COG0782 Transcription elongation factor - Prom 2020350 - 2020409 9.0 - Term 2020349 - 2020405 7.8 1930 754 Op 1 1/0.168 - CDS 2020422 - 2021384 613 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 1931 754 Op 2 . - CDS 2021362 - 2022135 963 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 1932 754 Op 3 . - CDS 2022145 - 2022474 508 ## Closa_1095 hypothetical protein 1933 754 Op 4 . - CDS 2022467 - 2023447 1005 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 1934 754 Op 5 . - CDS 2023457 - 2025502 2173 ## COG0078 Ornithine carbamoyltransferase 1935 754 Op 6 26/0.000 - CDS 2025517 - 2026464 1189 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 1936 754 Op 7 . - CDS 2026464 - 2026904 719 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 1937 754 Op 8 . - CDS 2026975 - 2027766 264 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 1938 754 Op 9 17/0.000 - CDS 2027779 - 2028429 920 ## COG0569 K+ transport systems, NAD-binding component 1939 754 Op 10 . - CDS 2028479 - 2029822 1740 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 2029889 - 2029948 3.8 - Term 2029990 - 2030046 7.8 1940 755 Op 1 40/0.000 - CDS 2030086 - 2030775 1048 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1941 755 Op 2 . - CDS 2030768 - 2032264 1819 ## COG0642 Signal transduction histidine kinase - Term 2032287 - 2032323 4.0 1942 755 Op 3 4/0.036 - CDS 2032343 - 2033530 1411 ## COG0192 S-adenosylmethionine synthetase - Prom 2033768 - 2033827 1.6 - Term 2033790 - 2033830 0.6 1943 756 Tu 1 . - CDS 2033836 - 2035053 1442 ## COG0477 Permeases of the major facilitator superfamily - Term 2035063 - 2035097 6.0 1944 757 Tu 1 . - CDS 2035163 - 2036455 1383 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Prom 2036523 - 2036582 9.6 1945 758 Tu 1 . - CDS 2036615 - 2037115 651 ## COG0703 Shikimate kinase - Prom 2037143 - 2037202 6.3 - Term 2037185 - 2037229 1.3 1946 759 Tu 1 . - CDS 2037239 - 2037595 361 ## gi|225569875|ref|ZP_03778900.1| hypothetical protein CLOHYLEM_05969 - Prom 2037720 - 2037779 5.3 - Term 2037854 - 2037902 3.0 1947 760 Tu 1 . - CDS 2037913 - 2038572 774 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 1948 761 Op 1 16/0.000 - CDS 2038891 - 2040264 1472 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 1949 761 Op 2 12/0.004 - CDS 2040268 - 2042034 1711 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 1950 761 Op 3 13/0.004 - CDS 2042062 - 2042382 444 ## COG1436 Archaeal/vacuolar-type H+-ATPase subunit F 1951 761 Op 4 11/0.004 - CDS 2042375 - 2043343 743 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 1952 761 Op 5 11/0.004 - CDS 2043377 - 2043970 661 ## COG1390 Archaeal/vacuolar-type H+-ATPase subunit E 1953 761 Op 6 16/0.000 - CDS 2044012 - 2044497 700 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 1954 761 Op 7 . - CDS 2044497 - 2046515 2439 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 1955 761 Op 8 . - CDS 2046554 - 2046862 329 ## gi|225569885|ref|ZP_03778910.1| hypothetical protein CLOHYLEM_05979 1956 761 Op 9 . - CDS 2046856 - 2046954 72 ## 1957 761 Op 10 . - CDS 2047024 - 2047515 451 ## COG0219 Predicted rRNA methylase (SpoU class) - Prom 2047607 - 2047666 13.1 1958 762 Op 1 . - CDS 2047702 - 2048607 1061 ## COG0309 Hydrogenase maturation factor 1959 762 Op 2 . - CDS 2048610 - 2050088 1711 ## COG2720 Uncharacterized vancomycin resistance protein 1960 762 Op 3 . - CDS 2050174 - 2050278 187 ## 1961 762 Op 4 . - CDS 2050310 - 2050936 202 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 1962 762 Op 5 . - CDS 2050972 - 2052711 1382 ## COG1032 Fe-S oxidoreductase 1963 762 Op 6 . - CDS 2052686 - 2053699 974 ## BCG9842_B1002 putative lipase/acylhydrolase - Prom 2053719 - 2053778 2.0 - Term 2054142 - 2054186 13.6 1964 763 Op 1 . - CDS 2054206 - 2054685 508 ## COG0590 Cytosine/adenosine deaminases 1965 763 Op 2 . - CDS 2054722 - 2055816 713 ## EUBREC_0291 hypothetical protein 1966 763 Op 3 . - CDS 2055877 - 2057304 1429 ## COG0232 dGTP triphosphohydrolase 1967 763 Op 4 . - CDS 2057339 - 2058361 1172 ## gi|225569897|ref|ZP_03778922.1| hypothetical protein CLOHYLEM_05992 - Prom 2058463 - 2058522 9.9 1968 764 Op 1 . - CDS 2058548 - 2060296 1374 ## COG3250 Beta-galactosidase/beta-glucuronidase 1969 764 Op 2 . - CDS 2060334 - 2060975 541 ## COG2091 Phosphopantetheinyl transferase 1970 764 Op 3 . - CDS 2060993 - 2061193 266 ## gi|225569900|ref|ZP_03778925.1| hypothetical protein CLOHYLEM_05995 - Prom 2061270 - 2061329 6.6 + Prom 2061248 - 2061307 5.0 1971 765 Op 1 3/0.052 + CDS 2061407 - 2062420 1294 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 1972 765 Op 2 . + CDS 2062442 - 2063503 862 ## COG0337 3-dehydroquinate synthetase 1973 765 Op 3 . + CDS 2063524 - 2064267 914 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 2064287 - 2064321 7.6 - Term 2064273 - 2064309 8.0 1974 766 Op 1 . - CDS 2064330 - 2065424 861 ## COG0006 Xaa-Pro aminopeptidase 1975 766 Op 2 4/0.036 - CDS 2065421 - 2066854 1387 ## COG2407 L-fucose isomerase and related proteins 1976 766 Op 3 3/0.052 - CDS 2066861 - 2068405 1724 ## COG1070 Sugar (pentulose and hexulose) kinases 1977 766 Op 4 . - CDS 2068398 - 2069075 605 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 2069139 - 2069198 3.6 1978 767 Op 1 1/0.168 - CDS 2069225 - 2070091 822 ## COG1737 Transcriptional regulators 1979 767 Op 2 4/0.036 - CDS 2070072 - 2071598 1289 ## COG1070 Sugar (pentulose and hexulose) kinases 1980 767 Op 3 . - CDS 2071582 - 2072994 1314 ## COG2407 L-fucose isomerase and related proteins 1981 767 Op 4 . - CDS 2073024 - 2074322 1605 ## COG4091 Predicted homoserine dehydrogenase 1982 767 Op 5 . - CDS 2074370 - 2075419 1332 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 1983 767 Op 6 . - CDS 2075379 - 2076200 662 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation - Prom 2076395 - 2076454 3.9 1984 768 Tu 1 . + CDS 2076420 - 2077256 741 ## CLH_2455 hypothetical protein + Term 2077286 - 2077337 21.1 1985 769 Op 1 7/0.008 - CDS 2077344 - 2078978 1458 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 1986 769 Op 2 . - CDS 2078992 - 2080797 1877 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 2080873 - 2080932 6.1 + Prom 2080840 - 2080899 6.4 1987 770 Op 1 . + CDS 2080946 - 2082202 865 ## Cbei_0732 extracellular solute-binding protein 1988 770 Op 2 . + CDS 2082215 - 2083228 1117 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 2083232 - 2083278 6.0 - Term 2083223 - 2083261 3.1 1989 771 Op 1 21/0.000 - CDS 2083280 - 2084272 1293 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1990 771 Op 2 21/0.000 - CDS 2084274 - 2085794 202 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1991 771 Op 3 16/0.000 - CDS 2085796 - 2086902 1311 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1992 771 Op 4 . - CDS 2086974 - 2088008 1235 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 2088049 - 2088108 6.5 - Term 2088057 - 2088092 3.4 1993 772 Tu 1 . - CDS 2088170 - 2089201 1163 ## COG2855 Predicted membrane protein - Prom 2089236 - 2089295 15.9 + Prom 2089258 - 2089317 16.1 1994 773 Tu 1 . + CDS 2089374 - 2090252 867 ## COG0583 Transcriptional regulator - Term 2090006 - 2090044 1.1 1995 774 Op 1 42/0.000 - CDS 2090253 - 2090669 464 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 1996 774 Op 2 42/0.000 - CDS 2090673 - 2092067 1418 ## COG0055 F0F1-type ATP synthase, beta subunit 1997 774 Op 3 42/0.000 - CDS 2092078 - 2092974 1042 ## COG0224 F0F1-type ATP synthase, gamma subunit 1998 774 Op 4 . - CDS 2092987 - 2094492 1412 ## COG0056 F0F1-type ATP synthase, alpha subunit 1999 774 Op 5 . - CDS 2094498 - 2095031 558 ## Closa_4167 ATP synthase F1, delta subunit 2000 774 Op 6 37/0.000 - CDS 2095012 - 2095512 574 ## COG0711 F0F1-type ATP synthase, subunit b 2001 774 Op 7 40/0.000 - CDS 2095528 - 2095755 339 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 2002 774 Op 8 . - CDS 2095788 - 2096510 868 ## COG0356 F0F1-type ATP synthase, subunit a - Prom 2096689 - 2096748 9.1 - Term 2096805 - 2096848 8.7 2003 775 Op 1 . - CDS 2096874 - 2098613 1654 ## COG2199 FOG: GGDEF domain - Prom 2098645 - 2098704 4.1 - Term 2098648 - 2098686 2.0 2004 775 Op 2 . - CDS 2098708 - 2098944 270 ## Closa_3433 carbon storage regulator, CsrA 2005 775 Op 3 . - CDS 2098947 - 2099384 397 ## COG1699 Uncharacterized protein conserved in bacteria 2006 775 Op 4 . - CDS 2099409 - 2100026 765 ## Closa_3431 hypothetical protein 2007 775 Op 5 . - CDS 2100061 - 2101056 1074 ## Closa_3430 Flagellin and related hook-associated protein-like protein 2008 775 Op 6 . - CDS 2101071 - 2102618 1680 ## COG1256 Flagellar hook-associated protein 2009 775 Op 7 . - CDS 2102640 - 2103089 567 ## Closa_3428 FlgN family protein 2010 775 Op 8 . - CDS 2103082 - 2103426 315 ## gi|225569940|ref|ZP_03778965.1| hypothetical protein CLOHYLEM_06035 2011 775 Op 9 . - CDS 2103477 - 2104802 1318 ## Closa_3434 hypothetical protein 2012 775 Op 10 . - CDS 2104774 - 2105526 871 ## COG2884 Predicted ATPase involved in cell division - Prom 2105553 - 2105612 2.3 + Prom 2105512 - 2105571 3.1 2013 776 Tu 1 . + CDS 2105591 - 2106286 378 ## Cphy_3539 hypothetical protein + Term 2106293 - 2106342 3.1 - Term 2106281 - 2106328 11.1 2014 777 Op 1 . - CDS 2106334 - 2106750 378 ## Closa_3436 hypothetical protein 2015 777 Op 2 . - CDS 2106747 - 2107112 491 ## Closa_3437 flagellar protein FliS 2016 777 Op 3 . - CDS 2107134 - 2109539 2852 ## COG1345 Flagellar capping protein - Prom 2109564 - 2109623 8.9 2017 778 Op 1 . - CDS 2109626 - 2110288 679 ## Closa_3440 Late competence development protein ComFB 2018 778 Op 2 . - CDS 2110304 - 2111077 801 ## COG1192 ATPases involved in chromosome partitioning 2019 778 Op 3 . - CDS 2111111 - 2112436 1428 ## COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains 2020 778 Op 4 3/0.052 - CDS 2112436 - 2113350 1026 ## COG0784 FOG: CheY-like receiver - Prom 2113379 - 2113438 1.9 2021 779 Op 1 8/0.008 - CDS 2113452 - 2113922 624 ## COG1871 Chemotaxis protein; stimulates methylation of MCP proteins 2022 779 Op 2 . - CDS 2113927 - 2114553 898 ## COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation 2023 779 Op 3 8/0.008 - CDS 2114573 - 2115283 927 ## COG4786 Flagellar basal body rod protein 2024 779 Op 4 . - CDS 2115299 - 2116051 929 ## COG4786 Flagellar basal body rod protein 2025 779 Op 5 2/0.096 - CDS 2116032 - 2116856 1086 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 2026 779 Op 6 13/0.004 - CDS 2116866 - 2118935 2136 ## COG1298 Flagellar biosynthesis pathway, component FlhA 2027 779 Op 7 10/0.008 - CDS 2118939 - 2120000 1048 ## COG1377 Flagellar biosynthesis pathway, component FlhB 2028 779 Op 8 . - CDS 2120017 - 2120790 1105 ## COG1684 Flagellar biosynthesis pathway, component FliR 2029 779 Op 9 . - CDS 2120803 - 2121066 344 ## Closa_3451 export protein FliQ family 3 2030 779 Op 10 . - CDS 2121082 - 2121744 699 ## COG1338 Flagellar biosynthesis pathway, component FliP 2031 779 Op 11 . - CDS 2121741 - 2122091 403 ## Closa_3453 flagellar biosynthesis protein FliZ 2032 779 Op 12 . - CDS 2122105 - 2123487 1679 ## COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation 2033 779 Op 13 . - CDS 2123522 - 2123965 479 ## COG1558 Flagellar basal body rod protein 2034 779 Op 14 . - CDS 2123990 - 2124349 507 ## COG0784 FOG: CheY-like receiver 2035 779 Op 15 . - CDS 2124406 - 2125416 1105 ## COG1868 Flagellar motor switch protein 2036 779 Op 16 19/0.000 - CDS 2125455 - 2126222 831 ## COG1360 Flagellar motor protein 2037 779 Op 17 . - CDS 2126240 - 2127064 1104 ## COG1291 Flagellar motor component 2038 779 Op 18 . - CDS 2127067 - 2127270 179 ## gi|225569970|ref|ZP_03778995.1| hypothetical protein CLOHYLEM_06065 2039 779 Op 19 . - CDS 2127326 - 2128210 1002 ## COG4786 Flagellar basal body rod protein 2040 779 Op 20 . - CDS 2128297 - 2128665 387 ## Closa_3462 flagellar operon protein 2041 779 Op 21 . - CDS 2128652 - 2129167 525 ## COG1843 Flagellar hook capping protein 2042 779 Op 22 . - CDS 2129182 - 2130279 1148 ## Closa_3464 hypothetical protein 2043 779 Op 23 . - CDS 2130334 - 2130831 545 ## Closa_3465 flagellar export protein FliJ 2044 779 Op 24 . - CDS 2130821 - 2132128 1531 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 2045 779 Op 25 . - CDS 2132149 - 2132898 957 ## Closa_3467 hypothetical protein 2046 779 Op 26 19/0.000 - CDS 2132891 - 2133916 1204 ## COG1536 Flagellar motor switch protein 2047 779 Op 27 . - CDS 2133894 - 2135474 1651 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein 2048 779 Op 28 . - CDS 2135536 - 2135844 364 ## Closa_3470 flagellar hook-basal body complex protein FliE 2049 779 Op 29 . - CDS 2135855 - 2136232 482 ## COG1815 Flagellar basal body protein 2050 779 Op 30 . - CDS 2136302 - 2138431 2447 ## COG2200 FOG: EAL domain + Prom 2138722 - 2138781 5.3 2051 780 Tu 1 . + CDS 2138877 - 2140673 1891 ## COG0840 Methyl-accepting chemotaxis protein + Term 2140842 - 2140885 11.1 2052 781 Tu 1 . - CDS 2141122 - 2141859 795 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 2141934 - 2141993 6.5 + Prom 2141879 - 2141938 10.8 2053 782 Tu 1 . + CDS 2141986 - 2142594 308 ## Closa_3420 type IV pilus assembly PilZ - Term 2142326 - 2142359 2.1 2054 783 Op 1 . - CDS 2142597 - 2142950 500 ## COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 2055 783 Op 2 . - CDS 2142937 - 2144376 1577 ## Closa_3422 hypothetical protein - Prom 2144433 - 2144492 4.7 + Prom 2144315 - 2144374 5.6 2056 784 Op 1 20/0.000 + CDS 2144509 - 2146593 1801 ## COG0643 Chemotaxis protein histidine kinase and related kinases 2057 784 Op 2 5/0.024 + CDS 2146618 - 2147085 607 ## COG0835 Chemotaxis signal transduction protein 2058 784 Op 3 13/0.004 + CDS 2147110 - 2147919 562 ## COG1352 Methylase of chemotaxis methyl-accepting proteins 2059 784 Op 4 . + CDS 2147960 - 2149048 652 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain + Term 2149121 - 2149159 5.2 - Term 2149101 - 2149155 9.1 2060 785 Op 1 . - CDS 2149242 - 2150969 1024 ## COG3291 FOG: PKD repeat 2061 785 Op 2 . - CDS 2150969 - 2151181 87 ## gi|225569999|ref|ZP_03779024.1| hypothetical protein CLOHYLEM_06094 - Prom 2151290 - 2151349 3.8 - Term 2151381 - 2151424 1.6 2062 786 Tu 1 . - CDS 2151536 - 2153044 953 ## COG1344 Flagellin and related hook-associated proteins + Prom 2153267 - 2153326 6.0 2063 787 Op 1 . + CDS 2153543 - 2154637 229 ## COG0582 Integrase 2064 787 Op 2 . + CDS 2154749 - 2156308 925 ## COG1344 Flagellin and related hook-associated proteins + Term 2156327 - 2156360 4.4 + Prom 2156550 - 2156609 6.6 2065 788 Tu 1 . + CDS 2156754 - 2158205 1154 ## COG1344 Flagellin and related hook-associated proteins + Term 2158292 - 2158347 17.5 - Term 2158285 - 2158331 15.1 2066 789 Tu 1 . - CDS 2158382 - 2158576 276 ## Ldb2064 hypothetical protein - Prom 2158784 - 2158843 5.4 + Prom 2158759 - 2158818 7.3 2067 790 Tu 1 . + CDS 2158876 - 2159343 404 ## COG1309 Transcriptional regulator + Term 2159368 - 2159407 5.0 + Prom 2159463 - 2159522 6.1 2068 791 Tu 1 . + CDS 2159688 - 2160638 412 ## gi|225570009|ref|ZP_03779034.1| hypothetical protein CLOHYLEM_06104 + Term 2160742 - 2160793 11.5 2069 792 Op 1 . - CDS 2160653 - 2161060 385 ## Closa_0167 hemerythrin-like metal-binding protein 2070 792 Op 2 . - CDS 2161086 - 2162429 1603 ## COG2200 FOG: EAL domain 2071 792 Op 3 . - CDS 2162422 - 2164068 1480 ## COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain 2072 792 Op 4 . - CDS 2164096 - 2168610 4532 ## COG4886 Leucine-rich repeat (LRR) protein 2073 792 Op 5 . - CDS 2168647 - 2170065 1468 ## COG0840 Methyl-accepting chemotaxis protein - Prom 2170210 - 2170269 5.2 - Term 2170224 - 2170292 27.2 2074 793 Op 1 . - CDS 2170299 - 2171096 906 ## COG1378 Predicted transcriptional regulators 2075 793 Op 2 . - CDS 2171113 - 2171325 282 ## gi|225570017|ref|ZP_03779042.1| hypothetical protein CLOHYLEM_06112 2076 793 Op 3 . - CDS 2171341 - 2172327 1185 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog - Prom 2172357 - 2172416 2.1 2077 794 Op 1 . - CDS 2172438 - 2174288 1925 ## Closa_1353 ATP-dependent OLD family endonuclease 2078 794 Op 2 . - CDS 2174324 - 2174503 314 ## gi|225570020|ref|ZP_03779045.1| hypothetical protein CLOHYLEM_06115 - Prom 2174532 - 2174591 6.1 - Term 2174566 - 2174617 10.2 2079 795 Op 1 . - CDS 2174707 - 2174793 76 ## - Prom 2174884 - 2174943 2.8 2080 795 Op 2 . - CDS 2174978 - 2175247 170 ## lhv_0422 hypothetical protein - Prom 2175297 - 2175356 9.6 - TRNA 2175430 - 2175502 85.9 # Lys CTT 0 0 - Term 2175367 - 2175425 9.8 2081 796 Op 1 11/0.004 - CDS 2175610 - 2176878 1504 ## COG0477 Permeases of the major facilitator superfamily - Term 2176919 - 2176954 3.7 2082 796 Op 2 . - CDS 2176961 - 2177599 798 ## COG1309 Transcriptional regulator - Prom 2177640 - 2177699 9.0 + Prom 2177637 - 2177696 5.7 2083 797 Tu 1 . + CDS 2177733 - 2178242 256 ## Hore_02780 hypothetical protein + Prom 2178264 - 2178323 7.9 2084 798 Op 1 . + CDS 2178366 - 2179070 780 ## gi|225570026|ref|ZP_03779051.1| hypothetical protein CLOHYLEM_06122 2085 798 Op 2 . + CDS 2179057 - 2180319 971 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 2086 798 Op 3 . + CDS 2180410 - 2181207 814 ## COG0345 Pyrroline-5-carboxylate reductase + Term 2181260 - 2181302 10.4 - Term 2181238 - 2181299 8.4 2087 799 Tu 1 . - CDS 2181306 - 2182496 1440 ## COG4086 Predicted secreted protein - Prom 2182572 - 2182631 6.5 2088 800 Tu 1 . - CDS 2182640 - 2182969 289 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 2183052 - 2183111 1.6 2089 801 Tu 1 . - CDS 2183187 - 2183843 712 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 2183966 - 2184025 6.1 + Prom 2183914 - 2183973 6.6 2090 802 Op 1 . + CDS 2184021 - 2184332 328 ## gi|225570033|ref|ZP_03779058.1| hypothetical protein CLOHYLEM_06129 2091 802 Op 2 . + CDS 2184336 - 2185385 1227 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 2092 802 Op 3 . + CDS 2185382 - 2187322 2002 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 2093 802 Op 4 . + CDS 2187347 - 2187781 516 ## Closa_4195 H+transporting two-sector ATPase C subunit 2094 802 Op 5 . + CDS 2187783 - 2188091 419 ## Closa_4196 Vacuolar H+transporting two-sector ATPase F subunit 2095 802 Op 6 . + CDS 2188108 - 2188695 611 ## Cphy_3443 hypothetical protein 2096 802 Op 7 16/0.000 + CDS 2188649 - 2190454 1983 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 2097 802 Op 8 16/0.000 + CDS 2190470 - 2191852 1647 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 2098 802 Op 9 . + CDS 2191865 - 2192482 721 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D + Term 2192496 - 2192542 3.1 + Prom 2192549 - 2192608 10.8 2099 803 Op 1 1/0.168 + CDS 2192685 - 2193332 477 ## COG1802 Transcriptional regulators 2100 803 Op 2 . + CDS 2193390 - 2194412 774 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 2101 803 Op 3 . + CDS 2194447 - 2195880 1525 ## COG1457 Purine-cytosine permease and related proteins 2102 803 Op 4 . + CDS 2195907 - 2196668 845 ## COG1402 Uncharacterized protein, putative amidase + Term 2196680 - 2196725 7.4 - Term 2196667 - 2196713 3.0 2103 804 Op 1 40/0.000 - CDS 2196740 - 2198290 1379 ## COG0642 Signal transduction histidine kinase 2104 804 Op 2 . - CDS 2198262 - 2198966 878 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 2199006 - 2199065 3.6 - Term 2199063 - 2199106 6.1 2105 805 Op 1 . - CDS 2199137 - 2199868 295 ## gi|225570048|ref|ZP_03779073.1| hypothetical protein CLOHYLEM_06144 2106 805 Op 2 . - CDS 2199940 - 2201850 2196 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 2201881 - 2201940 7.7 - Term 2201899 - 2201952 14.0 2107 806 Tu 1 . - CDS 2201964 - 2204930 3611 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 2205066 - 2205125 9.5 - Term 2205150 - 2205213 10.8 2108 807 Tu 1 . - CDS 2205344 - 2205412 61 ## - Prom 2205627 - 2205686 3.7 2109 808 Op 1 . - CDS 2206047 - 2207960 1856 ## COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats 2110 808 Op 2 . - CDS 2207988 - 2208452 517 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 2208487 - 2208546 3.0 - Term 2208585 - 2208634 4.1 2111 809 Op 1 . - CDS 2208656 - 2210935 2812 ## COG1048 Aconitase A 2112 809 Op 2 . - CDS 2210948 - 2212033 1167 ## COG2508 Regulator of polyketide synthase expression - Prom 2212062 - 2212121 6.2 + Prom 2212213 - 2212272 6.3 2113 810 Tu 1 . + CDS 2212417 - 2213742 1124 ## COG0534 Na+-driven multidrug efflux pump + Term 2213749 - 2213782 5.2 - Term 2213734 - 2213773 6.4 2114 811 Tu 1 . - CDS 2213789 - 2214901 1482 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 2214956 - 2215015 8.6 - Term 2214965 - 2215005 7.4 2115 812 Op 1 1/0.168 - CDS 2215065 - 2215901 955 ## COG0313 Predicted methyltransferases 2116 812 Op 2 1/0.168 - CDS 2215937 - 2216674 867 ## COG4123 Predicted O-methyltransferase 2117 812 Op 3 7/0.008 - CDS 2216664 - 2217575 1201 ## COG1774 Uncharacterized homolog of PSP1 2118 812 Op 4 . - CDS 2217580 - 2218569 1137 ## COG0470 ATPase involved in DNA replication 2119 812 Op 5 . - CDS 2218622 - 2220079 1157 ## COG1982 Arginine/lysine/ornithine decarboxylases 2120 812 Op 6 . - CDS 2220144 - 2221493 1700 ## COG0166 Glucose-6-phosphate isomerase 2121 812 Op 7 . - CDS 2221559 - 2222437 1098 ## gi|225570064|ref|ZP_03779089.1| hypothetical protein CLOHYLEM_06160 - Prom 2222492 - 2222551 4.7 2122 813 Tu 1 . - CDS 2222568 - 2223260 681 ## COG0775 Nucleoside phosphorylase - Prom 2223457 - 2223516 5.2 + Prom 2223353 - 2223412 9.7 2123 814 Tu 1 . + CDS 2223495 - 2223737 261 ## Closa_0054 hypothetical protein + Term 2223772 - 2223819 9.6 - Term 2223764 - 2223803 4.6 2124 815 Op 1 . - CDS 2224031 - 2224492 200 ## gi|225570067|ref|ZP_03779092.1| hypothetical protein CLOHYLEM_06163 2125 815 Op 2 . - CDS 2224449 - 2224568 64 ## 2126 815 Op 3 . - CDS 2224585 - 2225409 399 ## gi|225570068|ref|ZP_03779093.1| hypothetical protein CLOHYLEM_06164 - Prom 2225467 - 2225526 8.8 + Prom 2225495 - 2225554 5.2 2127 816 Tu 1 . + CDS 2225578 - 2226645 862 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase + Term 2226677 - 2226709 2.3 - Term 2226665 - 2226697 -0.9 2128 817 Op 1 . - CDS 2226701 - 2227243 437 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 2129 817 Op 2 . - CDS 2227264 - 2227671 539 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 2227777 - 2227836 4.7 + Prom 2227678 - 2227737 6.8 2130 818 Tu 1 . + CDS 2227758 - 2228495 441 ## COG0642 Signal transduction histidine kinase - Term 2228289 - 2228318 -0.4 2131 819 Tu 1 . - CDS 2228424 - 2229050 572 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 2229070 - 2229129 1.8 2132 820 Op 1 . - CDS 2229144 - 2229878 802 ## Closa_0140 FHA domain containing protein 2133 820 Op 2 . - CDS 2229884 - 2230285 377 ## gi|225570075|ref|ZP_03779100.1| hypothetical protein CLOHYLEM_06171 2134 820 Op 3 . - CDS 2230287 - 2230718 384 ## gi|225570076|ref|ZP_03779101.1| hypothetical protein CLOHYLEM_06172 2135 820 Op 4 . - CDS 2230706 - 2231512 489 ## bpr_I0071 hypothetical protein 2136 820 Op 5 . - CDS 2231596 - 2232963 1322 ## bpr_I0070 hypothetical protein 2137 820 Op 6 . - CDS 2232986 - 2233162 270 ## gi|225570079|ref|ZP_03779104.1| hypothetical protein CLOHYLEM_06175 2138 820 Op 7 . - CDS 2233177 - 2234448 1384 ## Cphy_0034 hypothetical protein 2139 820 Op 8 . - CDS 2234385 - 2235140 575 ## Cphy_0033 Flp pilus assembly protein TadB-like protein 2140 820 Op 9 . - CDS 2235097 - 2236299 1262 ## COG4962 Flp pilus assembly protein, ATPase CpaF 2141 820 Op 10 . - CDS 2236296 - 2237216 699 ## COG1192 ATPases involved in chromosome partitioning - Prom 2237374 - 2237433 8.2 - Term 2237341 - 2237373 -0.8 2142 821 Tu 1 . - CDS 2237446 - 2237655 194 ## gi|225570084|ref|ZP_03779109.1| hypothetical protein CLOHYLEM_06180 - Prom 2237703 - 2237762 4.7 + Prom 2237684 - 2237743 6.5 2143 822 Tu 1 . + CDS 2237778 - 2238014 213 ## gi|225570085|ref|ZP_03779110.1| hypothetical protein CLOHYLEM_06181 + Term 2238051 - 2238102 6.0 - Term 2238038 - 2238089 6.0 2144 823 Op 1 1/0.168 - CDS 2238094 - 2238582 640 ## COG2131 Deoxycytidylate deaminase 2145 823 Op 2 . - CDS 2238613 - 2239242 875 ## COG0035 Uracil phosphoribosyltransferase 2146 823 Op 3 . - CDS 2239263 - 2240315 1052 ## COG0009 Putative translation factor (SUA5) 2147 823 Op 4 . - CDS 2240336 - 2241016 768 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 2241061 - 2241120 5.3 2148 824 Op 1 . - CDS 2241125 - 2243119 2070 ## COG3858 Predicted glycosyl hydrolase 2149 824 Op 2 . - CDS 2243174 - 2243437 226 ## gi|225570092|ref|ZP_03779117.1| hypothetical protein CLOHYLEM_06188 - Prom 2243457 - 2243516 2.5 + Prom 2243796 - 2243855 10.2 2150 825 Tu 1 . + CDS 2243908 - 2244636 475 ## Closa_0328 Negative regulator of genetic competence + Term 2244645 - 2244695 14.4 - Term 2244628 - 2244683 10.8 2151 826 Tu 1 . - CDS 2244696 - 2244896 274 ## EUBELI_01948 hypothetical protein - Prom 2245034 - 2245093 7.6 - Term 2245305 - 2245336 -0.1 2152 827 Tu 1 . - CDS 2245360 - 2246262 896 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 2246324 - 2246383 10.6 + Prom 2246381 - 2246440 8.7 2153 828 Tu 1 . + CDS 2246537 - 2246935 356 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Prom 2246951 - 2247010 8.1 2154 829 Op 1 2/0.096 + CDS 2247044 - 2247586 342 ## COG1592 Rubrerythrin 2155 829 Op 2 . + CDS 2247687 - 2248223 692 ## COG1592 Rubrerythrin + Term 2248237 - 2248286 12.5 2156 830 Tu 1 . - CDS 2248334 - 2248936 511 ## CLH_1589 hypothetical protein - Prom 2248959 - 2249018 4.9 2157 831 Op 1 . + CDS 2249290 - 2250933 531 ## COG3666 Transposase and inactivated derivatives 2158 831 Op 2 . + CDS 2250990 - 2251652 484 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 2251669 - 2251725 22.5 - Term 2251658 - 2251712 19.6 2159 832 Tu 1 . - CDS 2251731 - 2252051 210 ## COG2827 Predicted endonuclease containing a URI domain - Prom 2252072 - 2252131 1.6 - Term 2252067 - 2252126 21.1 2160 833 Op 1 . - CDS 2252138 - 2252896 806 ## EUBREC_0243 hypothetical protein 2161 833 Op 2 . - CDS 2252943 - 2253833 791 ## COG2385 Sporulation protein and related proteins 2162 833 Op 3 . - CDS 2253875 - 2254471 657 ## gi|225570107|ref|ZP_03779132.1| hypothetical protein CLOHYLEM_06203 2163 833 Op 4 . - CDS 2254474 - 2256963 2554 ## COG0058 Glucan phosphorylase 2164 833 Op 5 . - CDS 2256947 - 2260096 3387 ## COG0060 Isoleucyl-tRNA synthetase - Prom 2260167 - 2260226 6.7 - Term 2260473 - 2260511 8.8 2165 834 Tu 1 . - CDS 2260549 - 2262321 514 ## SOR_0328 cell wall surface anchor family protein - Prom 2262351 - 2262410 3.1 - Term 2262413 - 2262464 1.5 2166 835 Op 1 . - CDS 2262503 - 2263867 1423 ## COG1686 D-alanyl-D-alanine carboxypeptidase 2167 835 Op 2 . - CDS 2263886 - 2264452 633 ## COG0681 Signal peptidase I - Prom 2264483 - 2264542 12.8 - Term 2264525 - 2264579 13.9 2168 836 Op 1 . - CDS 2264582 - 2264773 292 ## gi|225570113|ref|ZP_03779138.1| hypothetical protein CLOHYLEM_06209 2169 836 Op 2 . - CDS 2264795 - 2266600 1889 ## COG4886 Leucine-rich repeat (LRR) protein - Prom 2266649 - 2266708 80.3 + Prom 2266632 - 2266691 80.4 2170 837 Op 1 . + CDS 2266780 - 2268663 970 ## BBR47_42080 hypothetical protein 2171 837 Op 2 . + CDS 2268670 - 2269620 711 ## BBR47_42070 hypothetical protein + Prom 2269721 - 2269780 1.6 2172 838 Op 1 . + CDS 2269840 - 2270406 377 ## GSU0973 hypothetical protein 2173 838 Op 2 . + CDS 2270414 - 2271952 1282 ## COG0464 ATPases of the AAA+ class 2174 838 Op 3 . + CDS 2271968 - 2272357 419 ## BBR47_42240 hypothetical protein 2175 838 Op 4 . + CDS 2272395 - 2272721 398 ## PCC7424_1737 hypothetical protein 2176 838 Op 5 . + CDS 2272751 - 2273569 395 ## gi|225570121|ref|ZP_03779146.1| hypothetical protein CLOHYLEM_06217 + Prom 2273571 - 2273630 5.6 2177 839 Op 1 . + CDS 2273660 - 2274979 1166 ## gi|225570122|ref|ZP_03779147.1| hypothetical protein CLOHYLEM_06218 2178 839 Op 2 . + CDS 2274963 - 2275463 540 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 2275530 - 2275589 5.8 2179 840 Tu 1 . + CDS 2275636 - 2276796 857 ## Cphy_2506 hypothetical protein + Term 2276801 - 2276839 1.3 + Prom 2276843 - 2276902 4.2 2180 841 Tu 1 . + CDS 2276960 - 2277928 595 ## BC0954 TcdA-E operon negative regulator + Prom 2277935 - 2277994 8.3 2181 842 Tu 1 . + CDS 2278044 - 2281049 1405 ## COG4193 Beta- N-acetylglucosaminidase + Term 2281057 - 2281113 3.5 + Prom 2281194 - 2281253 7.3 2182 843 Op 1 . + CDS 2281488 - 2282510 389 ## COG1316 Transcriptional regulator 2183 843 Op 2 . + CDS 2282563 - 2283492 461 ## Closa_3994 hypothetical protein 2184 843 Op 3 . + CDS 2283556 - 2284653 476 ## COG0438 Glycosyltransferase + Prom 2284656 - 2284715 4.8 2185 844 Op 1 . + CDS 2284744 - 2287392 1258 ## COG5263 FOG: Glucan-binding domain (YG repeat) 2186 844 Op 2 . + CDS 2287382 - 2287444 67 ## + Prom 2287448 - 2287507 9.0 2187 845 Op 1 7/0.008 + CDS 2287590 - 2289497 688 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 2188 845 Op 2 5/0.024 + CDS 2289494 - 2290693 326 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 2189 845 Op 3 12/0.004 + CDS 2290711 - 2291391 -203 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis + Prom 2291485 - 2291544 5.0 2190 846 Op 1 1/0.168 + CDS 2291686 - 2292660 362 ## COG0438 Glycosyltransferase 2191 846 Op 2 10/0.008 + CDS 2292699 - 2294042 405 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase + Prom 2294067 - 2294126 1.5 2192 847 Op 1 . + CDS 2294175 - 2295134 106 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 2193 847 Op 2 . + CDS 2295175 - 2296248 335 ## COG0673 Predicted dehydrogenases and related proteins + Term 2296462 - 2296504 6.1 + Prom 2297005 - 2297064 7.0 2194 848 Op 1 4/0.036 + CDS 2297267 - 2297983 151 ## COG0438 Glycosyltransferase 2195 848 Op 2 . + CDS 2297990 - 2299120 421 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 2196 848 Op 3 . + CDS 2299195 - 2300523 197 ## gi|225570141|ref|ZP_03779166.1| hypothetical protein CLOHYLEM_06237 2197 848 Op 4 1/0.168 + CDS 2300537 - 2302249 248 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) + Term 2302356 - 2302401 4.3 2198 849 Tu 1 . + CDS 2302617 - 2303426 123 ## COG0438 Glycosyltransferase + Prom 2303453 - 2303512 3.4 2199 850 Tu 1 . + CDS 2303546 - 2303659 133 ## + Prom 2303832 - 2303891 5.3 2200 851 Tu 1 . + CDS 2303911 - 2304474 252 ## gi|225570144|ref|ZP_03779169.1| hypothetical protein CLOHYLEM_06240 + Term 2304638 - 2304671 -0.5 + Prom 2305498 - 2305557 2.5 2201 852 Tu 1 . + CDS 2305621 - 2306049 149 ## Rumal_3609 polysaccharide biosynthesis protein 2202 853 Tu 1 . - CDS 2306046 - 2306177 59 ## + Prom 2306629 - 2306688 5.5 2203 854 Op 1 . + CDS 2306803 - 2307537 163 ## SPAP_1394 hypothetical protein 2204 854 Op 2 . + CDS 2307567 - 2310683 1228 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 2310880 - 2310933 1.1 + Prom 2312092 - 2312151 4.0 2205 855 Op 1 . + CDS 2312245 - 2312910 162 ## gi|225570148|ref|ZP_03779173.1| hypothetical protein CLOHYLEM_06244 2206 855 Op 2 . + CDS 2312922 - 2313698 411 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 2207 856 Tu 1 . + CDS 2314952 - 2315062 117 ## gi|225570150|ref|ZP_03779175.1| hypothetical protein CLOHYLEM_06246 + Prom 2315066 - 2315125 2.6 2208 857 Op 1 1/0.168 + CDS 2315164 - 2316801 223 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 2209 857 Op 2 12/0.004 + CDS 2316847 - 2317791 466 ## COG0451 Nucleoside-diphosphate-sugar epimerases 2210 858 Op 1 12/0.004 + CDS 2318150 - 2318728 325 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 2211 858 Op 2 . + CDS 2318718 - 2319785 187 ## COG0451 Nucleoside-diphosphate-sugar epimerases 2212 858 Op 3 . + CDS 2319800 - 2320318 274 ## Closa_0554 GtrA family protein 2213 858 Op 4 . + CDS 2320337 - 2321986 94 ## Ccur_10460 hypothetical protein + Prom 2321993 - 2322052 7.4 2214 859 Op 1 3/0.052 + CDS 2322072 - 2323298 550 ## COG0438 Glycosyltransferase 2215 859 Op 2 . + CDS 2323298 - 2324164 292 ## COG3475 LPS biosynthesis protein 2216 859 Op 3 . + CDS 2324203 - 2324643 248 ## gi|225570159|ref|ZP_03779184.1| hypothetical protein CLOHYLEM_06255 2217 859 Op 4 . + CDS 2324660 - 2325379 215 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 2218 859 Op 5 . + CDS 2325384 - 2325737 314 ## Olsu_0597 hypothetical protein 2219 859 Op 6 . + CDS 2325808 - 2327412 614 ## bpr_I1244 hypothetical protein 2220 859 Op 7 . + CDS 2327464 - 2328858 984 ## COG1316 Transcriptional regulator + Term 2328872 - 2328914 9.5 + Prom 2328901 - 2328960 8.6 2221 860 Tu 1 . + CDS 2329030 - 2330856 1771 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 2330869 - 2330900 2.1 + Prom 2330929 - 2330988 8.2 2222 861 Op 1 3/0.052 + CDS 2331015 - 2331731 188 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 2223 861 Op 2 5/0.024 + CDS 2331724 - 2332737 757 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2224 861 Op 3 26/0.000 + CDS 2332749 - 2333729 736 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 2225 861 Op 4 . + CDS 2333730 - 2334815 1013 ## COG0438 Glycosyltransferase 2226 861 Op 5 . + CDS 2334845 - 2336338 1349 ## BCE_5386 polysaccharide transport protein, putative 2227 861 Op 6 . + CDS 2336346 - 2337440 1354 ## COG0562 UDP-galactopyranose mutase + Term 2337457 - 2337493 0.0 + Prom 2337455 - 2337514 4.0 2228 862 Op 1 . + CDS 2337546 - 2338760 1192 ## COG1316 Transcriptional regulator + Prom 2338764 - 2338823 2.5 2229 862 Op 2 . + CDS 2338846 - 2340330 1746 ## Closa_1330 cellulosome anchoring protein cohesin region + Prom 2340342 - 2340401 5.2 2230 862 Op 3 . + CDS 2340421 - 2340549 84 ## gi|225570173|ref|ZP_03779198.1| hypothetical protein CLOHYLEM_06269 + Term 2340710 - 2340760 11.5 - Term 2340439 - 2340481 8.1 2231 863 Op 1 . - CDS 2340554 - 2341213 205 ## gi|225570174|ref|ZP_03779199.1| hypothetical protein CLOHYLEM_06270 2232 863 Op 2 . - CDS 2341227 - 2342009 379 ## Cphy_2506 hypothetical protein - Prom 2342197 - 2342256 8.4 + Prom 2342155 - 2342214 6.9 2233 864 Tu 1 . + CDS 2342381 - 2343280 865 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 2343287 - 2343340 1.2 + Prom 2343365 - 2343424 4.7 2234 865 Op 1 16/0.000 + CDS 2343565 - 2344590 1210 ## COG1879 ABC-type sugar transport system, periplasmic component 2235 865 Op 2 21/0.000 + CDS 2344713 - 2345630 1236 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2236 865 Op 3 . + CDS 2345642 - 2347171 2001 ## COG1129 ABC-type sugar transport system, ATPase component 2237 865 Op 4 2/0.096 + CDS 2347213 - 2348388 1201 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2238 865 Op 5 1/0.168 + CDS 2348422 - 2349606 1296 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2239 865 Op 6 16/0.000 + CDS 2349623 - 2350771 1214 ## COG0673 Predicted dehydrogenases and related proteins 2240 865 Op 7 16/0.000 + CDS 2350785 - 2351762 1191 ## COG1082 Sugar phosphate isomerases/epimerases 2241 865 Op 8 . + CDS 2351813 - 2352847 1036 ## COG0673 Predicted dehydrogenases and related proteins + Term 2352890 - 2352940 17.1 - Term 2352824 - 2352859 -0.5 2242 866 Tu 1 . - CDS 2352941 - 2353843 820 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 2353883 - 2353942 10.9 2243 867 Op 1 1/0.168 + CDS 2354189 - 2355217 500 ## COG1879 ABC-type sugar transport system, periplasmic component 2244 867 Op 2 2/0.096 + CDS 2355313 - 2356260 363 ## COG0673 Predicted dehydrogenases and related proteins + Prom 2356321 - 2356380 2.0 2245 868 Tu 1 . + CDS 2356410 - 2357909 190 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Prom 2358060 - 2358119 3.4 2246 869 Tu 1 . + CDS 2358255 - 2358914 428 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Term 2358981 - 2359038 -0.0 + Prom 2359243 - 2359302 2.6 2247 870 Op 1 3/0.052 + CDS 2359398 - 2359757 89 ## COG1082 Sugar phosphate isomerases/epimerases 2248 870 Op 2 . + CDS 2359784 - 2360959 397 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2249 870 Op 3 . + CDS 2360990 - 2361820 698 ## Halsa_0172 xylose isomerase domain-containing protein TIM barrel 2250 870 Op 4 . + CDS 2361849 - 2362685 591 ## Halsa_0172 xylose isomerase domain-containing protein TIM barrel 2251 870 Op 5 21/0.000 + CDS 2362734 - 2364227 188 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 2252 870 Op 6 11/0.004 + CDS 2364251 - 2365252 766 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2253 870 Op 7 16/0.000 + CDS 2365245 - 2366198 981 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2254 870 Op 8 1/0.168 + CDS 2366274 - 2367299 1056 ## COG1879 ABC-type sugar transport system, periplasmic component 2255 870 Op 9 16/0.000 + CDS 2367333 - 2368484 1146 ## COG0673 Predicted dehydrogenases and related proteins 2256 870 Op 10 . + CDS 2368489 - 2369496 1072 ## COG1082 Sugar phosphate isomerases/epimerases + Term 2369526 - 2369594 22.2 + Prom 2369571 - 2369630 9.7 2257 871 Tu 1 . + CDS 2369685 - 2370470 196 ## PROTEIN SUPPORTED gi|163783284|ref|ZP_02178277.1| 50S ribosomal protein L16 + Term 2370509 - 2370559 13.8 + Prom 2370654 - 2370713 8.5 2258 872 Op 1 12/0.004 + CDS 2370754 - 2371665 990 ## COG3959 Transketolase, N-terminal subunit 2259 872 Op 2 . + CDS 2371678 - 2372634 1158 ## COG3958 Transketolase, C-terminal subunit 2260 872 Op 3 . + CDS 2372670 - 2373770 1254 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2261 872 Op 4 . + CDS 2373789 - 2373896 104 ## 2262 872 Op 5 . + CDS 2373889 - 2374908 1047 ## COG1402 Uncharacterized protein, putative amidase 2263 872 Op 6 1/0.168 + CDS 2374937 - 2376130 1569 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 2264 872 Op 7 . + CDS 2376142 - 2377044 976 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 2265 873 Op 1 . + CDS 2377155 - 2378573 354 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 2266 873 Op 2 . + CDS 2378604 - 2379749 1139 ## COG2828 Uncharacterized protein conserved in bacteria 2267 873 Op 3 30/0.000 + CDS 2379782 - 2381035 1271 ## COG0065 3-isopropylmalate dehydratase large subunit 2268 873 Op 4 . + CDS 2381050 - 2381526 565 ## COG0066 3-isopropylmalate dehydratase small subunit 2269 873 Op 5 . + CDS 2381531 - 2382223 1034 ## COG0822 NifU homolog involved in Fe-S cluster formation 2270 873 Op 6 . + CDS 2382233 - 2383234 938 ## CLL_A2793 hypothetical protein 2271 873 Op 7 . + CDS 2383256 - 2383744 424 ## gi|225570214|ref|ZP_03779239.1| hypothetical protein CLOHYLEM_06310 2272 873 Op 8 . + CDS 2383798 - 2385843 1617 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 2273 873 Op 9 . + CDS 2385803 - 2387101 1248 ## COG0738 Fucose permease + Term 2387181 - 2387214 -0.6 + Prom 2387189 - 2387248 7.1 2274 874 Op 1 24/0.000 + CDS 2387303 - 2389225 1609 ## COG0845 Membrane-fusion protein 2275 874 Op 2 36/0.000 + CDS 2389237 - 2389908 329 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2276 874 Op 3 . + CDS 2389902 - 2391086 371 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 + Prom 2391094 - 2391153 1.9 2277 874 Op 4 . + CDS 2391175 - 2391966 366 ## gi|225570221|ref|ZP_03779246.1| hypothetical protein CLOHYLEM_06317 + Term 2391996 - 2392039 10.4 - Term 2391984 - 2392027 11.2 2278 875 Op 1 . - CDS 2392043 - 2392534 638 ## COG3760 Uncharacterized conserved protein 2279 875 Op 2 . - CDS 2392551 - 2393105 711 ## COG1396 Predicted transcriptional regulators - Prom 2393141 - 2393200 6.1 + Prom 2393177 - 2393236 7.3 2280 876 Tu 1 . + CDS 2393277 - 2394044 690 ## COG1349 Transcriptional regulators of sugar metabolism 2281 877 Tu 1 . - CDS 2394049 - 2394300 265 ## CDR20291_3072 hypothetical protein - Prom 2394520 - 2394579 7.0 + Prom 2394523 - 2394582 6.4 2282 878 Tu 1 . + CDS 2394643 - 2395251 0 ## COG2020 Putative protein-S-isoprenylcysteine methyltransferase + Prom 2395802 - 2395861 7.5 2283 879 Op 1 . + CDS 2395976 - 2396563 161 ## COG1396 Predicted transcriptional regulators 2284 879 Op 2 . + CDS 2396579 - 2396716 185 ## + Term 2396735 - 2396797 5.2 + Prom 2396933 - 2396992 8.8 2285 880 Op 1 3/0.052 + CDS 2397034 - 2398053 464 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 2286 880 Op 2 . + CDS 2398066 - 2399412 1317 ## COG3395 Uncharacterized protein conserved in bacteria 2287 880 Op 3 . + CDS 2399428 - 2400393 1150 ## CDR20291_2840 2-keto-3-deoxygluconate permease + Term 2400446 - 2400485 6.6 2288 881 Op 1 . - CDS 2400413 - 2400805 141 ## Rumal_1830 GCN5-like N-acetyltransferase 2289 881 Op 2 . - CDS 2400826 - 2401392 585 ## COG3859 Predicted membrane protein - Prom 2401488 - 2401547 6.6 + Prom 2401589 - 2401648 7.1 2290 882 Tu 1 . + CDS 2401675 - 2402616 1075 ## COG1266 Predicted metal-dependent membrane protease + Term 2402853 - 2402888 1.5 - Term 2402585 - 2402628 5.9 2291 883 Op 1 24/0.000 - CDS 2402780 - 2404030 947 ## COG0004 Ammonia permease 2292 883 Op 2 . - CDS 2404067 - 2404405 428 ## COG0347 Nitrogen regulatory protein PII - Prom 2404605 - 2404664 7.6 2293 884 Op 1 21/0.000 + CDS 2404750 - 2409285 4172 ## COG0069 Glutamate synthase domain 2 2294 884 Op 2 . + CDS 2409298 - 2410797 1224 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Prom 2410804 - 2410863 7.5 2295 885 Op 1 7/0.008 + CDS 2410933 - 2412012 1272 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 2296 885 Op 2 7/0.008 + CDS 2412060 - 2413127 917 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 2413139 - 2413176 6.1 + Prom 2413178 - 2413237 4.8 2297 886 Op 1 7/0.008 + CDS 2413320 - 2414405 1097 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Prom 2414410 - 2414469 5.1 2298 886 Op 2 . + CDS 2414551 - 2415795 1125 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 2415846 - 2415893 13.5 + Prom 2415844 - 2415903 5.6 2299 887 Op 1 38/0.000 + CDS 2416014 - 2416763 1111 ## PROTEIN SUPPORTED gi|240145469|ref|ZP_04744070.1| ribosomal protein S2 2300 887 Op 2 . + CDS 2416814 - 2417734 556 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 2417767 - 2417818 13.3 2301 888 Op 1 . + CDS 2418169 - 2418777 616 ## gi|225570247|ref|ZP_03779272.1| hypothetical protein CLOHYLEM_06343 2302 888 Op 2 . + CDS 2418862 - 2420673 1365 ## COG2866 Predicted carboxypeptidase + Term 2420726 - 2420781 8.0 + Prom 2420770 - 2420829 5.7 2303 889 Op 1 40/0.000 + CDS 2420892 - 2421557 498 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2304 889 Op 2 4/0.036 + CDS 2421592 - 2422518 720 ## COG0642 Signal transduction histidine kinase 2305 889 Op 3 . + CDS 2422572 - 2423252 283 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 2306 889 Op 4 . + CDS 2423249 - 2426035 2367 ## CKR_2998 hypothetical protein + Term 2426258 - 2426312 12.1 + Prom 2426079 - 2426138 8.7 2307 890 Op 1 18/0.000 + CDS 2426388 - 2427476 1311 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 2308 890 Op 2 16/0.000 + CDS 2427523 - 2427903 581 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 2309 890 Op 3 12/0.004 + CDS 2427916 - 2429244 1487 ## COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain 2310 890 Op 4 . + CDS 2429231 - 2430661 1604 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 2311 890 Op 5 3/0.052 + CDS 2430679 - 2431677 1002 ## COG0095 Lipoate-protein ligase A 2312 890 Op 6 . + CDS 2431694 - 2433097 846 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 2313 890 Op 7 3/0.052 + CDS 2433190 - 2434869 1925 ## COG2759 Formyltetrahydrofolate synthetase 2314 890 Op 8 . + CDS 2434886 - 2435512 794 ## COG3404 Methenyl tetrahydrofolate cyclohydrolase 2315 890 Op 9 . + CDS 2435530 - 2436387 807 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 2316 890 Op 10 . + CDS 2436414 - 2437037 669 ## Tresu_0483 formate/nitrite transporter + Term 2437042 - 2437069 -0.8 2317 891 Tu 1 . - CDS 2437030 - 2437446 468 ## CDR20291_1132 hypothetical protein - Prom 2437480 - 2437539 3.7 + Prom 2437543 - 2437602 5.5 2318 892 Tu 1 . + CDS 2437641 - 2438216 493 ## COG1309 Transcriptional regulator + Term 2438217 - 2438266 7.5 + Prom 2438219 - 2438278 2.2 2319 893 Op 1 . + CDS 2438303 - 2438593 197 ## COG5470 Uncharacterized conserved protein 2320 893 Op 2 1/0.168 + CDS 2438597 - 2439427 733 ## COG0491 Zn-dependent hydrolases, including glyoxylases 2321 893 Op 3 . + CDS 2439498 - 2440457 879 ## COG0042 tRNA-dihydrouridine synthase 2322 893 Op 4 . + CDS 2440487 - 2441110 514 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases + Prom 2441131 - 2441190 4.8 2323 894 Tu 1 . + CDS 2441218 - 2444217 2994 ## COG4886 Leucine-rich repeat (LRR) protein + Term 2444237 - 2444284 13.5 + Prom 2444316 - 2444375 9.9 2324 895 Tu 1 . + CDS 2444404 - 2446068 1302 ## COG2199 FOG: GGDEF domain + Term 2446159 - 2446214 1.5 2325 896 Tu 1 . - CDS 2446072 - 2446830 757 ## COG2188 Transcriptional regulators - Prom 2446876 - 2446935 7.8 + Prom 2446829 - 2446888 4.1 2326 897 Tu 1 . + CDS 2447038 - 2447784 684 ## COG2188 Transcriptional regulators + Term 2447832 - 2447875 0.5 + Prom 2447805 - 2447864 5.2 2327 898 Tu 1 . + CDS 2447897 - 2448304 430 ## COG0346 Lactoylglutathione lyase and related lyases + Prom 2448334 - 2448393 10.3 2328 899 Op 1 16/0.000 + CDS 2448456 - 2449520 1347 ## COG1879 ABC-type sugar transport system, periplasmic component 2329 899 Op 2 21/0.000 + CDS 2449592 - 2451103 206 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 2330 899 Op 3 . + CDS 2451126 - 2452091 966 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2331 899 Op 4 . + CDS 2452109 - 2452861 951 ## SLGD_00878 deoxyribose-phosphate aldolase (EC:4.1.2.4) 2332 899 Op 5 . + CDS 2452864 - 2453505 693 ## gi|225570278|ref|ZP_03779303.1| hypothetical protein CLOHYLEM_06374 2333 899 Op 6 . + CDS 2453524 - 2454462 917 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 2454494 - 2454566 31.2 - Term 2454398 - 2454426 -1.0 2334 900 Tu 1 . - CDS 2454547 - 2461311 6227 ## Ccel_2644 cell wall/surface repeat protein - Prom 2461504 - 2461563 11.7 + Prom 2461456 - 2461515 11.5 2335 901 Op 1 . + CDS 2461561 - 2462247 426 ## COG2199 FOG: GGDEF domain 2336 901 Op 2 . + CDS 2462267 - 2462857 524 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 2337 901 Op 3 . + CDS 2462850 - 2463575 750 ## Closa_3855 hypothetical protein 2338 901 Op 4 . + CDS 2463596 - 2464519 981 ## EUBREC_1535 hypothetical protein 2339 901 Op 5 . + CDS 2464562 - 2465611 1124 ## COG1459 Type II secretory pathway, component PulF 2340 901 Op 6 . + CDS 2465630 - 2465968 356 ## bpr_I2055 hypothetical protein 2341 901 Op 7 . + CDS 2465965 - 2466450 435 ## bpr_I2056 hypothetical protein 2342 901 Op 8 . + CDS 2466447 - 2466884 290 ## bpr_I2057 hypothetical protein 2343 901 Op 9 . + CDS 2466898 - 2467377 331 ## EUBREC_1530 hypothetical protein 2344 901 Op 10 . + CDS 2467390 - 2468448 1010 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Term 2468451 - 2468512 1.3 - Term 2468448 - 2468488 6.1 2345 902 Op 1 . - CDS 2468501 - 2469001 526 ## Ethha_1177 transcriptional regulator, SARP family - Prom 2469075 - 2469134 7.0 2346 902 Op 2 . - CDS 2469162 - 2469812 446 ## Shel_26010 PAP2 superfamily protein - Prom 2469846 - 2469905 7.3 2347 903 Tu 1 . - CDS 2469992 - 2470105 67 ## - Prom 2470135 - 2470194 6.3 - Term 2470788 - 2470825 0.8 2348 904 Op 1 . - CDS 2470826 - 2471407 214 ## COG2020 Putative protein-S-isoprenylcysteine methyltransferase 2349 904 Op 2 . - CDS 2471456 - 2471920 312 ## COG0346 Lactoylglutathione lyase and related lyases 2350 904 Op 3 . - CDS 2471952 - 2472776 -131 ## COG1357 Uncharacterized low-complexity proteins - Prom 2472808 - 2472867 2.9 2351 905 Op 1 1/0.168 - CDS 2472870 - 2473625 393 ## COG0500 SAM-dependent methyltransferases 2352 905 Op 2 . - CDS 2473662 - 2474156 238 ## PROTEIN SUPPORTED gi|229872047|ref|ZP_04491633.1| acetyltransferase, ribosomal protein N-acetylase 2353 906 Op 1 . - CDS 2474273 - 2474635 168 ## ELI_1514 hypothetical protein 2354 906 Op 2 . - CDS 2474667 - 2475452 227 ## COG0500 SAM-dependent methyltransferases 2355 906 Op 3 . - CDS 2475471 - 2475794 242 ## gi|225570301|ref|ZP_03779326.1| hypothetical protein CLOHYLEM_06397 - Prom 2475852 - 2475911 5.2 2356 907 Tu 1 . - CDS 2475981 - 2476067 67 ## - Prom 2476184 - 2476243 4.0 2357 908 Op 1 36/0.000 - CDS 2476290 - 2478914 1644 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 2358 908 Op 2 . - CDS 2478926 - 2479597 196 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Prom 2479761 - 2479820 5.5 - Term 2479719 - 2479760 4.5 2359 909 Op 1 . - CDS 2479837 - 2479908 57 ## 2360 909 Op 2 . - CDS 2479871 - 2480239 252 ## COG3603 Uncharacterized conserved protein 2361 909 Op 3 . - CDS 2480274 - 2481335 337 ## COG0477 Permeases of the major facilitator superfamily - Term 2481479 - 2481514 0.5 2362 910 Tu 1 . - CDS 2481686 - 2482171 120 ## Sgly_1223 isochorismatase hydrolase - Prom 2482212 - 2482271 5.5 2363 911 Op 1 40/0.000 - CDS 2482308 - 2483255 400 ## COG0642 Signal transduction histidine kinase 2364 911 Op 2 . - CDS 2483248 - 2483934 115 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - TRNA 2484182 - 2484254 66.3 # Arg CCT 0 0 2365 912 Op 1 . - CDS 2484510 - 2485385 786 ## Closa_4282 hypothetical protein 2366 912 Op 2 . - CDS 2485412 - 2486695 1147 ## COG0172 Seryl-tRNA synthetase 2367 912 Op 3 . - CDS 2486724 - 2487266 677 ## Cphy_3933 hypothetical protein 2368 912 Op 4 25/0.000 - CDS 2487273 - 2488193 838 ## COG1475 Predicted transcriptional regulators 2369 912 Op 5 . - CDS 2488199 - 2488960 693 ## COG1192 ATPases involved in chromosome partitioning 2370 912 Op 6 . - CDS 2488966 - 2489160 92 ## gi|225570316|ref|ZP_03779341.1| hypothetical protein CLOHYLEM_06413 + Prom 2489403 - 2489462 7.9 2371 913 Tu 1 . + CDS 2489637 - 2490260 224 ## Closa_4292 alpha/beta hydrolase fold protein + Term 2490283 - 2490330 5.1 - Term 2490264 - 2490324 15.1 2372 914 Op 1 24/0.000 - CDS 2490332 - 2491045 562 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 2373 914 Op 2 11/0.004 - CDS 2491056 - 2492957 1265 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 2374 914 Op 3 4/0.036 - CDS 2492923 - 2494338 1042 ## COG0486 Predicted GTPase - Prom 2494390 - 2494449 6.5 - Term 2494396 - 2494443 5.3 2375 915 Op 1 16/0.000 - CDS 2494451 - 2495263 658 ## COG1847 Predicted RNA-binding protein 2376 915 Op 2 18/0.000 - CDS 2495276 - 2496346 683 ## COG0706 Preprotein translocase subunit YidC 2377 915 Op 3 16/0.000 - CDS 2496385 - 2496597 97 ## COG0759 Uncharacterized conserved protein 2378 915 Op 4 . - CDS 2496612 - 2496965 272 ## COG0594 RNase P protein component - Term 2496987 - 2497014 -0.8 2379 915 Op 5 . - CDS 2497015 - 2497149 192 ## PROTEIN SUPPORTED gi|160882064|ref|YP_001561032.1| ribosomal protein L34 - Prom 2497209 - 2497268 8.3 + Prom 2497431 - 2497490 8.7 2380 916 Op 1 . + CDS 2497543 - 2498931 1392 ## COG0593 ATPase involved in DNA replication initiation 2381 916 Op 2 . + CDS 2498956 - 2499084 62 ## 2382 916 Op 3 6/0.016 + CDS 2499179 - 2500285 1209 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 2383 916 Op 4 9/0.008 + CDS 2500321 - 2500530 268 ## COG2501 Uncharacterized conserved protein 2384 916 Op 5 9/0.008 + CDS 2500535 - 2501605 706 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 2385 916 Op 6 24/0.000 + CDS 2501616 - 2503550 1979 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 2386 916 Op 7 . + CDS 2503561 - 2506062 2929 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 2506079 - 2506131 6.5 - Term 2506068 - 2506120 7.4 2387 917 Op 1 . - CDS 2506161 - 2506898 531 ## gi|225570331|ref|ZP_03779356.1| hypothetical protein CLOHYLEM_06428 2388 917 Op 2 8/0.008 - CDS 2506911 - 2507759 786 ## COG1131 ABC-type multidrug transport system, ATPase component 2389 917 Op 3 . - CDS 2507756 - 2508124 411 ## COG1725 Predicted transcriptional regulators - Prom 2508254 - 2508313 8.5 + Prom 2508224 - 2508283 9.2 2390 918 Op 1 7/0.008 + CDS 2508346 - 2509929 1424 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 2391 918 Op 2 . + CDS 2509975 - 2510907 908 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 2392 918 Op 3 16/0.000 + CDS 2510921 - 2512264 982 ## COG1129 ABC-type sugar transport system, ATPase component + Term 2512280 - 2512321 11.3 + Prom 2512378 - 2512437 11.7 2393 919 Op 1 16/0.000 + CDS 2512488 - 2513462 1027 ## COG1879 ABC-type sugar transport system, periplasmic component 2394 919 Op 2 21/0.000 + CDS 2513523 - 2515010 210 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2395 919 Op 3 . + CDS 2515022 - 2515972 1179 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2396 919 Op 4 . + CDS 2516028 - 2516705 703 ## COG1878 Predicted metal-dependent hydrolase 2397 919 Op 5 6/0.016 + CDS 2516732 - 2518015 778 ## COG3395 Uncharacterized protein conserved in bacteria 2398 919 Op 6 . + CDS 2518056 - 2518649 391 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 2399 919 Op 7 . + CDS 2518654 - 2519634 1050 ## COG1052 Lactate dehydrogenase and related dehydrogenases 2400 919 Op 8 . + CDS 2519706 - 2520530 635 ## SpiBuddy_0718 xylose isomerase 2401 919 Op 9 . + CDS 2520570 - 2521319 721 ## Isop_2964 putative transferase protein 2402 919 Op 10 10/0.008 + CDS 2521354 - 2522361 1027 ## COG2376 Dihydroxyacetone kinase 2403 919 Op 11 . + CDS 2522377 - 2523006 585 ## COG2376 Dihydroxyacetone kinase - Term 2523008 - 2523047 10.1 2404 920 Tu 1 . - CDS 2523079 - 2525343 974 ## gi|225570348|ref|ZP_03779373.1| hypothetical protein CLOHYLEM_06445 - Prom 2525440 - 2525499 9.9 - Term 2525500 - 2525544 10.2 2405 921 Op 1 . - CDS 2525568 - 2526740 1250 ## COG2199 FOG: GGDEF domain 2406 921 Op 2 . - CDS 2526778 - 2527218 449 ## BHWA1_01097 putative redox-active protein - Prom 2527265 - 2527324 7.7 + Prom 2527354 - 2527413 5.8 2407 922 Op 1 11/0.004 + CDS 2527453 - 2528295 523 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 2408 922 Op 2 . + CDS 2528328 - 2528879 407 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 2409 922 Op 3 . + CDS 2528897 - 2529595 763 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 2410 923 Tu 1 . - CDS 2529587 - 2530645 782 ## COG2017 Galactose mutarotase and related enzymes - Prom 2530884 - 2530943 6.7 + Prom 2530548 - 2530607 5.6 2411 924 Op 1 . + CDS 2530842 - 2532014 1261 ## COG1609 Transcriptional regulators 2412 924 Op 2 . + CDS 2532064 - 2533467 1529 ## Halhy_4525 hypothetical protein 2413 924 Op 3 21/0.000 + CDS 2533500 - 2534981 189 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 2414 924 Op 4 11/0.004 + CDS 2535002 - 2535994 1173 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2415 924 Op 5 16/0.000 + CDS 2536006 - 2536977 1257 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2416 924 Op 6 1/0.168 + CDS 2537006 - 2538049 1365 ## COG1879 ABC-type sugar transport system, periplasmic component 2417 924 Op 7 . + CDS 2538085 - 2538987 987 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold + Term 2539117 - 2539155 3.1 - Term 2539492 - 2539533 7.0 2418 925 Op 1 12/0.004 - CDS 2539642 - 2540628 743 ## COG3958 Transketolase, C-terminal subunit 2419 925 Op 2 . - CDS 2540628 - 2541467 787 ## COG3959 Transketolase, N-terminal subunit 2420 925 Op 3 . - CDS 2541481 - 2542152 957 ## COG0274 Deoxyribose-phosphate aldolase 2421 925 Op 4 . - CDS 2542178 - 2543212 1117 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 2543247 - 2543306 7.2 + Prom 2543291 - 2543350 8.5 2422 926 Op 1 16/0.000 + CDS 2543458 - 2544576 1426 ## COG1879 ABC-type sugar transport system, periplasmic component + Prom 2544590 - 2544649 2.8 2423 926 Op 2 21/0.000 + CDS 2544680 - 2546191 1318 ## COG1129 ABC-type sugar transport system, ATPase component 2424 926 Op 3 2/0.096 + CDS 2546181 - 2547146 1170 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2425 926 Op 4 1/0.168 + CDS 2547162 - 2548040 905 ## COG1082 Sugar phosphate isomerases/epimerases 2426 926 Op 5 . + CDS 2548058 - 2549539 1511 ## COG1070 Sugar (pentulose and hexulose) kinases 2427 926 Op 6 16/0.000 + CDS 2549556 - 2550635 1024 ## COG0673 Predicted dehydrogenases and related proteins 2428 926 Op 7 3/0.052 + CDS 2550635 - 2551462 750 ## COG1082 Sugar phosphate isomerases/epimerases 2429 926 Op 8 . + CDS 2551474 - 2552277 571 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 2552291 - 2552330 10.2 - Term 2552272 - 2552319 1.5 2430 927 Tu 1 . - CDS 2552332 - 2553105 833 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 2553130 - 2553189 9.3 + Prom 2553213 - 2553272 11.1 2431 928 Tu 1 . + CDS 2553450 - 2554067 600 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 2554186 - 2554253 30.2 + Prom 2554164 - 2554223 80.4 2432 929 Tu 1 . + CDS 2554375 - 2554638 269 ## gi|225570378|ref|ZP_03779403.1| hypothetical protein CLOHYLEM_06475 + Term 2554774 - 2554815 7.2 + TRNA 2554674 - 2554761 60.2 # Ser GCT 0 0 + TRNA 2555360 - 2555433 88.3 # Ile GAT 0 0 + TRNA 2555466 - 2555538 86.3 # Ala TGC 0 0 + Prom 2556036 - 2556095 80.4 2433 930 Op 1 . + CDS 2556250 - 2556720 606 ## COG1070 Sugar (pentulose and hexulose) kinases 2434 930 Op 2 . + CDS 2556763 - 2557368 687 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes + Term 2557519 - 2557565 -0.5 2435 931 Op 1 . - CDS 2557948 - 2558895 895 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 2436 931 Op 2 . - CDS 2558901 - 2559533 507 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 2437 931 Op 3 . - CDS 2559554 - 2560519 682 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 2438 931 Op 4 . - CDS 2560543 - 2561475 788 ## COG0169 Shikimate 5-dehydrogenase - Prom 2561500 - 2561559 7.7 + Prom 2561602 - 2561661 10.3 2439 932 Op 1 . + CDS 2561690 - 2563015 1546 ## COG0534 Na+-driven multidrug efflux pump 2440 932 Op 2 33/0.000 + CDS 2563095 - 2563790 947 ## COG0528 Uridylate kinase 2441 932 Op 3 19/0.000 + CDS 2563809 - 2564360 849 ## COG0233 Ribosome recycling factor + Term 2564372 - 2564417 8.6 2442 932 Op 4 32/0.000 + CDS 2564433 - 2565149 785 ## COG0020 Undecaprenyl pyrophosphate synthase 2443 932 Op 5 15/0.000 + CDS 2565142 - 2565939 730 ## COG0575 CDP-diglyceride synthetase 2444 932 Op 6 17/0.000 + CDS 2565977 - 2567119 1385 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2445 932 Op 7 . + CDS 2567130 - 2568161 1110 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 2446 932 Op 8 . + CDS 2568199 - 2568891 714 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 2568905 - 2568944 5.2 + Prom 2569475 - 2569534 2.2 2447 933 Tu 1 . + CDS 2569602 - 2569691 72 ## + Term 2569756 - 2569796 7.5 2448 934 Op 1 . - CDS 2569728 - 2569901 115 ## gi|225570398|ref|ZP_03779423.1| hypothetical protein CLOHYLEM_06498 2449 934 Op 2 . - CDS 2569920 - 2571185 1064 ## COG3409 Putative peptidoglycan-binding domain-containing protein - Prom 2571280 - 2571339 9.4 + Prom 2571235 - 2571294 4.2 2450 935 Tu 1 . + CDS 2571314 - 2572534 1253 ## COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain + Term 2572540 - 2572586 4.1 - Term 2572529 - 2572573 4.5 2451 936 Tu 1 . - CDS 2572601 - 2573107 449 ## Cphy_2664 CarD family transcriptional regulator - Prom 2573280 - 2573339 6.6 + Prom 2573242 - 2573301 6.6 2452 937 Op 1 24/0.000 + CDS 2573453 - 2574523 1113 ## COG0505 Carbamoylphosphate synthase small subunit 2453 937 Op 2 . + CDS 2574523 - 2577720 3846 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 2577727 - 2577775 9.0 + Prom 2577842 - 2577901 4.9 2454 938 Op 1 40/0.000 + CDS 2577936 - 2578610 869 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2455 938 Op 2 4/0.036 + CDS 2578607 - 2579626 1174 ## COG0642 Signal transduction histidine kinase + Prom 2579654 - 2579713 5.3 2456 939 Op 1 36/0.000 + CDS 2579752 - 2580519 300 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2457 939 Op 2 . + CDS 2580512 - 2582497 2295 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 2582503 - 2582567 23.7 + Prom 2582553 - 2582612 6.7 2458 940 Tu 1 . + CDS 2582645 - 2582989 437 ## COG0662 Mannose-6-phosphate isomerase + Term 2583003 - 2583042 10.1 - Term 2582991 - 2583029 10.7 2459 941 Tu 1 . - CDS 2583060 - 2584157 1100 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase - Prom 2584230 - 2584289 7.2 + Prom 2584179 - 2584238 10.9 2460 942 Op 1 . + CDS 2584259 - 2587579 3655 ## EUBREC_1826 hypothetical protein 2461 942 Op 2 . + CDS 2587597 - 2588880 1317 ## EUBREC_1825 hypothetical protein 2462 942 Op 3 . + CDS 2588855 - 2589637 869 ## EUBREC_1824 hypothetical protein + Prom 2589646 - 2589705 2.7 2463 943 Op 1 31/0.000 + CDS 2589741 - 2590610 1162 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 2590633 - 2590667 3.4 2464 943 Op 2 34/0.000 + CDS 2590709 - 2591359 888 ## COG0765 ABC-type amino acid transport system, permease component 2465 943 Op 3 . + CDS 2591371 - 2592060 254 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 2466 943 Op 4 . + CDS 2592110 - 2592223 73 ## 2467 943 Op 5 2/0.096 + CDS 2592273 - 2592980 1056 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 2468 943 Op 6 . + CDS 2592999 - 2594426 1663 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 2469 943 Op 7 . + CDS 2594477 - 2595910 1756 ## COG0015 Adenylosuccinate lyase + Term 2595955 - 2596005 15.4 + Prom 2596116 - 2596175 4.8 2470 944 Tu 1 . + CDS 2596232 - 2597596 866 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 2597623 - 2597662 1.2 2471 945 Op 1 . + CDS 2598041 - 2598424 344 ## Shel_25250 hypothetical protein 2472 945 Op 2 . + CDS 2598496 - 2599776 1744 ## Shel_25240 glycine/sarcosine/betaine reductase component B alpha/beta subunit 2473 945 Op 3 . + CDS 2599795 - 2600847 1121 ## Shel_25230 glycine reductase, selenoprotein B 2474 945 Op 4 . + CDS 2600875 - 2601105 152 ## Shel_25230 glycine reductase, selenoprotein B 2475 945 Op 5 11/0.004 + CDS 2601176 - 2602120 566 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 2476 945 Op 6 . + CDS 2602133 - 2602450 530 ## COG0526 Thiol-disulfide isomerase and thioredoxins 2477 945 Op 7 . + CDS 2602515 - 2602646 130 ## Amet_3592 glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.3 1.21.4.4 1.21.4.2) 2478 945 Op 8 . + CDS 2602662 - 2602985 213 ## Shel_25200 glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4) + Term 2602991 - 2603028 6.1 2479 946 Op 1 . + CDS 2603043 - 2604581 1733 ## Shel_25190 hypothetical protein 2480 946 Op 2 . + CDS 2604594 - 2605748 1379 ## Shel_25180 fatty acid/phospholipid biosynthesis enzyme + Term 2605786 - 2605836 16.1 + Prom 2605794 - 2605853 4.3 2481 947 Tu 1 . + CDS 2605873 - 2606856 857 ## gi|225570434|ref|ZP_03779459.1| hypothetical protein CLOHYLEM_06534 + Term 2606875 - 2606924 9.6 + Prom 2606914 - 2606973 5.8 2482 948 Op 1 . + CDS 2607000 - 2608232 1234 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 2483 948 Op 2 . + CDS 2608229 - 2608699 573 ## COG3610 Uncharacterized conserved protein 2484 948 Op 3 . + CDS 2608752 - 2609492 840 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 2485 948 Op 4 . + CDS 2609495 - 2610127 645 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Prom 2610129 - 2610188 80.3 2486 949 Op 1 . + CDS 2610231 - 2611049 937 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 2487 949 Op 2 . + CDS 2611059 - 2612900 1801 ## COG0210 Superfamily I DNA and RNA helicases + Term 2612982 - 2613016 4.3 - Term 2612834 - 2612869 3.3 2488 950 Tu 1 . - CDS 2612883 - 2613218 482 ## Closa_1312 hypothetical protein - Prom 2613327 - 2613386 5.8 + Prom 2613202 - 2613261 3.5 2489 951 Op 1 . + CDS 2613315 - 2613416 104 ## gi|225570442|ref|ZP_03779467.1| hypothetical protein CLOHYLEM_06542 2490 951 Op 2 . + CDS 2613413 - 2614423 1320 ## COG1879 ABC-type sugar transport system, periplasmic component 2491 951 Op 3 . + CDS 2614439 - 2616130 1380 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 2492 951 Op 4 . + CDS 2616133 - 2616795 691 ## EUBREC_1055 hypothetical protein 2493 951 Op 5 . + CDS 2616824 - 2617381 531 ## EUBREC_1818 hypothetical protein - Term 2617355 - 2617398 10.5 2494 952 Tu 1 . - CDS 2617403 - 2618284 1037 ## COG0583 Transcriptional regulator - Prom 2618422 - 2618481 8.0 + Prom 2618249 - 2618308 7.5 2495 953 Tu 1 . + CDS 2618509 - 2620179 1910 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 2620383 - 2620449 30.0 + TRNA 2620353 - 2620437 51.0 # Leu AAG 0 0 + Prom 2620355 - 2620414 80.3 2496 954 Op 1 . + CDS 2620642 - 2621565 521 ## BALH_3339 triple helix repeat-containing collagen + Term 2621575 - 2621609 4.0 + Prom 2621594 - 2621653 4.6 2497 954 Op 2 . + CDS 2621722 - 2625129 3201 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Term 2625160 - 2625204 7.4 + Prom 2625292 - 2625351 7.8 2498 955 Op 1 . + CDS 2625429 - 2626973 1740 ## COG2326 Uncharacterized conserved protein 2499 955 Op 2 . + CDS 2626970 - 2627992 791 ## ELI_0698 hypothetical protein 2500 955 Op 3 3/0.052 + CDS 2628011 - 2629018 1131 ## COG0232 dGTP triphosphohydrolase + Term 2629066 - 2629108 6.1 + Prom 2629038 - 2629097 1.7 2501 956 Op 1 31/0.000 + CDS 2629124 - 2630893 1931 ## COG0358 DNA primase (bacterial type) 2502 956 Op 2 5/0.024 + CDS 2630933 - 2632045 1306 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 2503 956 Op 3 9/0.008 + CDS 2632059 - 2632754 578 ## COG2384 Predicted SAM-dependent methyltransferase 2504 956 Op 4 . + CDS 2632768 - 2633547 927 ## COG0327 Uncharacterized conserved protein 2505 956 Op 5 . + CDS 2633617 - 2635284 704 ## PROTEIN SUPPORTED gi|39938628|ref|NP_950394.1| ribosomal protein L13 + Term 2635386 - 2635430 9.7 - Term 2635216 - 2635263 11.8 2506 957 Op 1 . - CDS 2635315 - 2636190 692 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 2507 957 Op 2 8/0.008 - CDS 2636204 - 2638087 1880 ## COG0687 Spermidine/putrescine-binding periplasmic protein 2508 957 Op 3 30/0.000 - CDS 2638084 - 2638893 1082 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 2509 957 Op 4 4/0.036 - CDS 2638904 - 2639977 1411 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 2510 957 Op 5 . - CDS 2640000 - 2640584 738 ## COG1396 Predicted transcriptional regulators - Prom 2640613 - 2640672 5.2 + Prom 2640575 - 2640634 6.3 2511 958 Tu 1 . + CDS 2640711 - 2640860 80 ## gi|225570466|ref|ZP_03779491.1| hypothetical protein CLOHYLEM_06567 2512 959 Tu 1 . - CDS 2640834 - 2640992 74 ## gi|225570467|ref|ZP_03779492.1| hypothetical protein CLOHYLEM_06568 - Prom 2641101 - 2641160 5.4 - Term 2641297 - 2641343 2.0 2513 960 Tu 1 . - CDS 2641478 - 2642584 968 ## COG0082 Chorismate synthase - Prom 2642612 - 2642671 5.9 + Prom 2642655 - 2642714 4.5 2514 961 Op 1 . + CDS 2642745 - 2644628 1761 ## COG1376 Uncharacterized protein conserved in bacteria 2515 961 Op 2 15/0.000 + CDS 2644656 - 2645789 1112 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 2645792 - 2645851 6.5 2516 961 Op 3 . + CDS 2645882 - 2646184 360 ## COG1862 Preprotein translocase subunit YajC + Term 2646200 - 2646235 5.1 + Prom 2646213 - 2646272 6.6 2517 962 Tu 1 . + CDS 2646340 - 2648676 2711 ## COG0058 Glucan phosphorylase + Term 2648677 - 2648739 21.5 - Term 2648666 - 2648727 23.4 2518 963 Tu 1 . - CDS 2648729 - 2649403 313 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 - Prom 2649429 - 2649488 6.5 + Prom 2649453 - 2649512 3.4 2519 964 Op 1 . + CDS 2649535 - 2650323 751 ## COG2820 Uridine phosphorylase 2520 964 Op 2 3/0.052 + CDS 2650326 - 2651009 785 ## COG0274 Deoxyribose-phosphate aldolase 2521 964 Op 3 . + CDS 2651006 - 2651434 465 ## COG0295 Cytidine deaminase 2522 964 Op 4 . + CDS 2651461 - 2652651 1449 ## COG1015 Phosphopentomutase + Prom 2652657 - 2652716 4.4 2523 965 Op 1 1/0.168 + CDS 2652747 - 2653835 1300 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 2524 965 Op 2 6/0.016 + CDS 2653839 - 2655512 2088 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 2525 965 Op 3 . + CDS 2655530 - 2657212 1992 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 2526 965 Op 4 6/0.016 + CDS 2657246 - 2658328 949 ## COG1932 Phosphoserine aminotransferase 2527 965 Op 5 1/0.168 + CDS 2658331 - 2659494 1386 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 2528 965 Op 6 . + CDS 2659561 - 2660994 1414 ## COG0726 Predicted xylanase/chitin deacetylase + Term 2661239 - 2661282 9.2 - Term 2661227 - 2661269 -0.0 2529 966 Tu 1 . - CDS 2661300 - 2662475 1172 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 2662621 - 2662680 6.0 + Prom 2662580 - 2662639 7.8 2530 967 Op 1 1/0.168 + CDS 2662671 - 2663978 1396 ## COG1625 Fe-S oxidoreductase, related to NifB/MoaA family 2531 967 Op 2 2/0.096 + CDS 2664012 - 2665340 1633 ## COG1160 Predicted GTPases 2532 967 Op 3 1/0.168 + CDS 2665343 - 2665984 822 ## COG0344 Predicted membrane protein 2533 967 Op 4 . + CDS 2665997 - 2667010 1264 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 2667162 - 2667208 -0.5 2534 968 Op 1 . - CDS 2667629 - 2667790 105 ## gi|225570494|ref|ZP_03779519.1| hypothetical protein CLOHYLEM_06595 2535 968 Op 2 . - CDS 2667821 - 2668708 1039 ## COG0583 Transcriptional regulator - Prom 2668873 - 2668932 7.3 + Prom 2668772 - 2668831 8.9 2536 969 Op 1 1/0.168 + CDS 2668907 - 2669746 969 ## COG1082 Sugar phosphate isomerases/epimerases 2537 969 Op 2 1/0.168 + CDS 2669782 - 2671707 2145 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 2538 969 Op 3 4/0.036 + CDS 2671731 - 2672603 1125 ## COG0169 Shikimate 5-dehydrogenase 2539 969 Op 4 . + CDS 2672642 - 2673925 1390 ## COG0477 Permeases of the major facilitator superfamily + Term 2673938 - 2673975 5.5 2540 970 Op 1 . + CDS 2674039 - 2675475 1696 ## CDR20291_1888 hypothetical protein 2541 970 Op 2 . + CDS 2675537 - 2677009 1903 ## Closa_2078 stage IV sporulation protein A + Term 2677031 - 2677095 29.6 + Prom 2677075 - 2677134 6.6 2542 971 Op 1 23/0.000 + CDS 2677180 - 2677566 600 ## COG1380 Putative effector of murein hydrolase LrgA 2543 971 Op 2 . + CDS 2677559 - 2678236 748 ## COG1346 Putative effector of murein hydrolase 2544 971 Op 3 . + CDS 2678292 - 2678759 571 ## COG0521 Molybdopterin biosynthesis enzymes 2545 971 Op 4 . + CDS 2678769 - 2679452 740 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 2546 971 Op 5 . + CDS 2679465 - 2679938 574 ## COG0328 Ribonuclease HI + Prom 2680301 - 2680360 6.2 2547 972 Op 1 . + CDS 2680414 - 2680917 448 ## COG2606 Uncharacterized conserved protein 2548 972 Op 2 . + CDS 2680914 - 2681456 664 ## COG0655 Multimeric flavodoxin WrbA + Term 2681461 - 2681500 10.7 - Term 2681447 - 2681488 11.1 2549 973 Op 1 19/0.000 - CDS 2681499 - 2681939 511 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 2550 973 Op 2 . - CDS 2681952 - 2682869 794 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 2551 973 Op 3 . - CDS 2682880 - 2683416 548 ## COG0778 Nitroreductase - Term 2683429 - 2683472 4.7 2552 973 Op 4 . - CDS 2683476 - 2683763 179 ## Cphy_0824 hypothetical protein - Prom 2683999 - 2684058 4.8 + Prom 2683861 - 2683920 4.0 2553 974 Op 1 . + CDS 2683947 - 2685077 1375 ## COG0077 Prephenate dehydratase 2554 974 Op 2 . + CDS 2685095 - 2686387 1606 ## COG2607 Predicted ATPase (AAA+ superfamily) + Term 2686453 - 2686506 10.1 - Term 2686299 - 2686327 0.3 2555 975 Tu 1 . - CDS 2686505 - 2688112 186 ## ELI_3403 cell wall/surface repeat protein - Prom 2688243 - 2688302 5.5 - Term 2688299 - 2688329 -0.9 2556 976 Tu 1 . - CDS 2688406 - 2690142 1508 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 2690213 - 2690272 8.8 + Prom 2690233 - 2690292 7.0 2557 977 Op 1 8/0.008 + CDS 2690351 - 2691232 1097 ## COG1561 Uncharacterized stress-induced protein 2558 977 Op 2 . + CDS 2691247 - 2691867 727 ## COG0194 Guanylate kinase 2559 977 Op 3 . + CDS 2691871 - 2692113 398 ## bpr_I1283 DNA-directed RNA polymerase omega subunit RpoZ (EC:2.7.7.6) + Term 2692130 - 2692166 5.6 2560 978 Op 1 2/0.096 + CDS 2692185 - 2693510 810 ## PROTEIN SUPPORTED gi|229215236|ref|ZP_04341567.1| SSU ribosomal protein S12P methylthiotransferase 2561 978 Op 2 4/0.036 + CDS 2693498 - 2694049 390 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 2562 978 Op 3 . + CDS 2694052 - 2695299 346 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 2563 978 Op 4 . + CDS 2695313 - 2696797 1603 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 2696800 - 2696859 1.8 2564 979 Op 1 . + CDS 2696893 - 2697585 734 ## COG0822 NifU homolog involved in Fe-S cluster formation 2565 979 Op 2 . + CDS 2697622 - 2698632 1185 ## Closa_2929 hypothetical protein + Term 2698657 - 2698709 10.3 - Term 2698651 - 2698691 2.7 2566 980 Op 1 . - CDS 2698735 - 2699277 509 ## gi|225570528|ref|ZP_03779553.1| hypothetical protein CLOHYLEM_06630 2567 980 Op 2 . - CDS 2699279 - 2700508 817 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 2700576 - 2700635 7.3 + Prom 2700484 - 2700543 4.5 2568 981 Op 1 1/0.168 + CDS 2700718 - 2702262 1297 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 2569 981 Op 2 . + CDS 2702307 - 2704229 1994 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 2570 981 Op 3 . + CDS 2704276 - 2704785 664 ## nfa24700 hypothetical protein 2571 981 Op 4 1/0.168 + CDS 2704811 - 2706085 1396 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 2572 981 Op 5 . + CDS 2706139 - 2707566 1529 ## COG0477 Permeases of the major facilitator superfamily 2573 981 Op 6 . + CDS 2707586 - 2709571 2093 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 2574 981 Op 7 . + CDS 2709610 - 2710158 599 ## gi|225570536|ref|ZP_03779561.1| hypothetical protein CLOHYLEM_06638 + Term 2710310 - 2710334 -0.3 2575 982 Op 1 . - CDS 2710155 - 2710358 110 ## gi|225570537|ref|ZP_03779562.1| hypothetical protein CLOHYLEM_06639 2576 982 Op 2 . - CDS 2710365 - 2710457 67 ## - Prom 2710489 - 2710548 7.2 + Prom 2710477 - 2710536 9.5 2577 983 Tu 1 . + CDS 2710564 - 2711901 1462 ## COG0069 Glutamate synthase domain 2 - Term 2711850 - 2711894 -1.0 2578 984 Tu 1 . - CDS 2711952 - 2712467 672 ## COG4767 Glycopeptide antibiotics resistance protein - Prom 2712594 - 2712653 5.4 + Prom 2712520 - 2712579 5.5 2579 985 Op 1 . + CDS 2712608 - 2713525 1365 ## COG0598 Mg2+ and Co2+ transporters 2580 985 Op 2 . + CDS 2713540 - 2714232 670 ## TDE0353 GDSL family lipase/acylhydrolase 2581 985 Op 3 . + CDS 2714249 - 2714500 266 ## gi|225570543|ref|ZP_03779568.1| hypothetical protein CLOHYLEM_06645 + Prom 2714528 - 2714587 6.4 2582 986 Op 1 . + CDS 2714607 - 2715710 1191 ## COG1396 Predicted transcriptional regulators 2583 986 Op 2 . + CDS 2715714 - 2715923 427 ## LC705_00137 hypothetical protein 2584 986 Op 3 . + CDS 2715924 - 2716835 339 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 2585 986 Op 4 . + CDS 2716832 - 2717596 905 ## Cthe_1535 hypothetical protein + Term 2717621 - 2717659 5.5 2586 987 Op 1 . + CDS 2717676 - 2718509 846 ## Cphy_0207 hypothetical protein 2587 987 Op 2 . + CDS 2718516 - 2719166 736 ## COG2214 DnaJ-class molecular chaperone 2588 987 Op 3 . + CDS 2719157 - 2719690 555 ## Cphy_0209 hypothetical protein + Term 2719714 - 2719760 7.1 - Term 2719702 - 2719748 10.3 2589 988 Tu 1 . - CDS 2719754 - 2720617 136 ## SpiBuddy_2600 hypothetical protein - Prom 2720676 - 2720735 11.3 + Prom 2720716 - 2720775 8.6 2590 989 Op 1 2/0.096 + CDS 2720890 - 2722299 1549 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 2591 989 Op 2 . + CDS 2722327 - 2723292 1300 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases + Prom 2723294 - 2723353 80.3 2592 990 Op 1 . + CDS 2723409 - 2723717 235 ## Pden_0678 permease for cytosine/purines, uracil, thiamine, allantoin 2593 990 Op 2 2/0.096 + CDS 2723733 - 2725106 1598 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 2594 990 Op 3 . + CDS 2725135 - 2726496 1521 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases + Term 2726616 - 2726650 4.5 - Term 2726599 - 2726643 3.0 2595 991 Tu 1 . - CDS 2726871 - 2727725 760 ## COG0657 Esterase/lipase - Prom 2727841 - 2727900 5.5 + Prom 2727921 - 2727980 5.8 2596 992 Op 1 . + CDS 2728038 - 2728826 1005 ## COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization 2597 992 Op 2 . + CDS 2728849 - 2729244 433 ## COG0251 Putative translation initiation inhibitor, yjgF family 2598 992 Op 3 . + CDS 2729272 - 2730324 1247 ## COG2055 Malate/L-lactate dehydrogenases 2599 992 Op 4 . + CDS 2730339 - 2733350 3555 ## COG0074 Succinyl-CoA synthetase, alpha subunit 2600 992 Op 5 . + CDS 2733368 - 2734303 1208 ## COG0549 Carbamate kinase 2601 992 Op 6 . + CDS 2734318 - 2735928 1813 ## COG1620 L-lactate permease 2602 992 Op 7 . + CDS 2735948 - 2736151 348 ## gi|225570566|ref|ZP_03779591.1| hypothetical protein CLOHYLEM_06668 2603 992 Op 8 . + CDS 2736165 - 2737430 1417 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 2604 992 Op 9 . + CDS 2737457 - 2738461 913 ## COG2186 Transcriptional regulators + Term 2738474 - 2738523 4.1 + Prom 2738473 - 2738532 2.7 2605 992 Op 10 . + CDS 2738637 - 2740307 2147 ## COG2508 Regulator of polyketide synthase expression + Term 2740321 - 2740386 14.3 + Prom 2740364 - 2740423 6.4 2606 993 Op 1 . + CDS 2740534 - 2741781 1240 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 2607 993 Op 2 . + CDS 2741816 - 2742976 1238 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 2608 993 Op 3 29/0.000 + CDS 2743002 - 2743796 959 ## COG2086 Electron transfer flavoprotein, beta subunit 2609 993 Op 4 . + CDS 2743797 - 2744780 1230 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 2744835 - 2744885 10.5 2610 994 Tu 1 . + CDS 2744924 - 2745442 635 ## COG0778 Nitroreductase + Term 2745593 - 2745639 -0.5 - Term 2745560 - 2745621 2.3 2611 995 Tu 1 . - CDS 2745688 - 2745798 65 ## - Prom 2745873 - 2745932 2.5 - Term 2746016 - 2746050 1.1 2612 996 Op 1 . - CDS 2746192 - 2747079 589 ## COG0642 Signal transduction histidine kinase 2613 996 Op 2 . - CDS 2747090 - 2747923 538 ## Dhaf_3947 hypothetical protein 2614 996 Op 3 1/0.168 - CDS 2747916 - 2748830 688 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 2748854 - 2748913 3.1 2615 996 Op 4 . - CDS 2748920 - 2749600 472 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 2749720 - 2749779 4.3 + Prom 2749558 - 2749617 8.9 2616 997 Op 1 15/0.000 + CDS 2749779 - 2750276 620 ## COG0440 Acetolactate synthase, small (regulatory) subunit 2617 997 Op 2 . + CDS 2750347 - 2751360 1245 ## COG0059 Ketol-acid reductoisomerase + Term 2751371 - 2751419 17.1 + Prom 2751426 - 2751485 6.4 2618 998 Op 1 . + CDS 2751534 - 2752175 664 ## Rumal_0148 hypothetical protein 2619 998 Op 2 . + CDS 2752231 - 2752872 878 ## Rumal_0148 hypothetical protein + Term 2752896 - 2752956 22.5 - Term 2752966 - 2753004 2.9 2620 999 Tu 1 . - CDS 2753025 - 2753312 264 ## PROTEIN SUPPORTED gi|160880450|ref|YP_001559418.1| ribosomal protein S20 - Prom 2753371 - 2753430 6.0 + Prom 2753349 - 2753408 3.5 2621 1000 Tu 1 . + CDS 2753471 - 2754424 1249 ## Closa_0874 spore protease (EC:3.4.24.78) + Prom 2754506 - 2754565 4.3 2622 1001 Tu 1 . + CDS 2754591 - 2755754 1294 ## EUBREC_1620 stage II sporulation protein P + Term 2755817 - 2755865 -0.2 + Prom 2755802 - 2755861 2.5 2623 1002 Op 1 24/0.000 + CDS 2755934 - 2757856 1992 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 2624 1002 Op 2 . + CDS 2757872 - 2760112 2622 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 2760237 - 2760274 7.3 + Prom 2760156 - 2760215 7.7 2625 1003 Op 1 32/0.000 + CDS 2760290 - 2760757 626 ## COG0779 Uncharacterized protein conserved in bacteria 2626 1003 Op 2 22/0.000 + CDS 2760778 - 2761971 749 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 2627 1003 Op 3 8/0.008 + CDS 2761981 - 2762259 205 ## PROTEIN SUPPORTED gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein 2628 1003 Op 4 10/0.008 + CDS 2762246 - 2762569 319 ## PROTEIN SUPPORTED gi|240146074|ref|ZP_04744675.1| ribosomal protein L7Ae/L30e/S12e/Gadd45 2629 1003 Op 5 32/0.000 + CDS 2762584 - 2765421 2600 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 2630 1003 Op 6 4/0.036 + CDS 2765456 - 2765836 482 ## COG0858 Ribosome-binding factor A 2631 1003 Op 7 1/0.168 + CDS 2765826 - 2766791 911 ## COG0618 Exopolyphosphatase-related proteins 2632 1003 Op 8 12/0.004 + CDS 2766799 - 2767716 708 ## COG0130 Pseudouridine synthase 2633 1003 Op 9 . + CDS 2767727 - 2768656 338 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 2634 1003 Op 10 . + CDS 2768674 - 2770326 2150 ## COG1283 Na+/phosphate symporter + Prom 2770328 - 2770387 4.0 2635 1004 Tu 1 . + CDS 2770471 - 2770737 362 ## PROTEIN SUPPORTED gi|238924297|ref|YP_002937813.1| ribosomal protein S15 + Term 2770763 - 2770808 12.1 + Prom 2770858 - 2770917 8.8 2636 1005 Op 1 23/0.000 + CDS 2770953 - 2771426 597 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 2637 1005 Op 2 1/0.168 + CDS 2771429 - 2773315 1824 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 2638 1005 Op 3 . + CDS 2773328 - 2775010 1683 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 2775147 - 2775202 9.2 + Prom 2775059 - 2775118 6.4 2639 1006 Tu 1 . + CDS 2775241 - 2777328 1388 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 2777338 - 2777384 9.5 2640 1007 Tu 1 . + CDS 2777433 - 2778338 1160 ## COG1893 Ketopantoate reductase + Term 2778495 - 2778529 -0.8 + Prom 2778438 - 2778497 4.3 2641 1008 Op 1 40/0.000 + CDS 2778545 - 2779078 327 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2642 1008 Op 2 . + CDS 2779075 - 2780151 567 ## COG0642 Signal transduction histidine kinase + Term 2780168 - 2780219 0.4 + Prom 2780172 - 2780231 3.4 2643 1009 Op 1 . + CDS 2780325 - 2780480 128 ## gi|167757751|ref|ZP_02429878.1| hypothetical protein CLOSCI_00082 2644 1009 Op 2 . + CDS 2780477 - 2781325 205 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 2781363 - 2781394 -0.7 + Prom 2781371 - 2781430 2.7 2645 1010 Op 1 . + CDS 2781454 - 2782320 412 ## CDR20291_3060 putative ABC transporter permease 2646 1010 Op 2 . + CDS 2782323 - 2783333 286 ## CD3199 putative ABC transporter permease 2647 1010 Op 3 . + CDS 2783375 - 2783530 64 ## gi|225570616|ref|ZP_03779641.1| hypothetical protein CLOHYLEM_06718 2648 1010 Op 4 3/0.052 + CDS 2783575 - 2784207 631 ## COG1309 Transcriptional regulator 2649 1010 Op 5 . + CDS 2784194 - 2785090 1126 ## COG1131 ABC-type multidrug transport system, ATPase component 2650 1010 Op 6 . + CDS 2785090 - 2785887 945 ## Cphy_1635 hypothetical protein + Term 2785909 - 2785974 20.5 - Term 2785901 - 2785957 15.2 2651 1011 Tu 1 . - CDS 2785964 - 2787142 898 ## COG1408 Predicted phosphohydrolases - Prom 2787219 - 2787278 6.7 + Prom 2787183 - 2787242 4.3 2652 1012 Op 1 . + CDS 2787290 - 2788240 936 ## COG3854 Uncharacterized protein conserved in bacteria 2653 1012 Op 2 . + CDS 2788247 - 2788642 400 ## gi|225570622|ref|ZP_03779647.1| hypothetical protein CLOHYLEM_06724 + Prom 2788662 - 2788721 80.4 2654 1013 Op 1 . + CDS 2788875 - 2789069 298 ## Closa_3250 stage III sporulation protein AC 2655 1013 Op 2 . + CDS 2789090 - 2789476 575 ## Closa_3249 stage III sporulation protein AD 2656 1013 Op 3 . + CDS 2789473 - 2790699 1547 ## Cphy_2520 sporulation stage III, protein AE 2657 1013 Op 4 . + CDS 2790709 - 2791068 449 ## gi|225570628|ref|ZP_03779651.1| hypothetical protein CLOHYLEM_06728 2658 1013 Op 5 . + CDS 2791058 - 2791660 563 ## Cphy_2518 hypothetical protein 2659 1013 Op 6 . + CDS 2791689 - 2792327 762 ## Closa_3245 hypothetical protein + Term 2792365 - 2792400 4.3 + Prom 2792407 - 2792466 6.7 2660 1014 Tu 1 . + CDS 2792532 - 2794133 1796 ## COG4108 Peptide chain release factor RF-3 + Prom 2794143 - 2794202 11.4 2661 1015 Op 1 10/0.008 + CDS 2794234 - 2794617 606 ## COG1302 Uncharacterized protein conserved in bacteria 2662 1015 Op 2 1/0.168 + CDS 2794633 - 2795016 469 ## COG0781 Transcription termination factor 2663 1015 Op 3 . + CDS 2795034 - 2796242 1115 ## COG1570 Exonuclease VII, large subunit 2664 1015 Op 4 . + CDS 2796235 - 2796459 398 ## gi|225570635|ref|ZP_03779658.1| hypothetical protein CLOHYLEM_06735 2665 1015 Op 5 13/0.004 + CDS 2796449 - 2797351 1161 ## COG0142 Geranylgeranyl pyrophosphate synthase 2666 1015 Op 6 6/0.016 + CDS 2797367 - 2799241 2319 ## COG1154 Deoxyxylulose-5-phosphate synthase 2667 1015 Op 7 5/0.024 + CDS 2799238 - 2800047 857 ## COG1189 Predicted rRNA methylase 2668 1015 Op 8 1/0.168 + CDS 2800064 - 2800903 1002 ## COG0061 Predicted sugar kinase 2669 1015 Op 9 8/0.008 + CDS 2800908 - 2801357 598 ## COG1438 Arginine repressor 2670 1015 Op 10 3/0.052 + CDS 2801366 - 2803039 1822 ## COG0497 ATPase involved in DNA repair + Term 2803074 - 2803107 2.3 + Prom 2803058 - 2803117 1.9 2671 1016 Tu 1 . + CDS 2803188 - 2804252 983 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Prom 2804274 - 2804333 8.1 2672 1017 Op 1 . + CDS 2804371 - 2805162 797 ## COG0784 FOG: CheY-like receiver 2673 1017 Op 2 . + CDS 2805227 - 2806669 1308 ## COG0297 Glycogen synthase 2674 1017 Op 3 . + CDS 2806706 - 2807575 720 ## COG0685 5,10-methylenetetrahydrofolate reductase 2675 1017 Op 4 . + CDS 2807629 - 2808237 647 ## Ethha_1377 vitamin B12 dependent methionine synthase activation region 2676 1017 Op 5 . + CDS 2808265 - 2810649 2673 ## COG1410 Methionine synthase I, cobalamin-binding domain + Prom 2810704 - 2810763 4.4 2677 1018 Tu 1 . + CDS 2810804 - 2811628 827 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Prom 2811648 - 2811707 80.4 2678 1019 Op 1 . + CDS 2811731 - 2812378 761 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 2812400 - 2812454 22.4 + Prom 2812441 - 2812500 7.9 2679 1019 Op 2 . + CDS 2812569 - 2815208 2637 ## COG0013 Alanyl-tRNA synthetase 2680 1020 Tu 1 . + CDS 2815617 - 2816981 1564 ## COG0531 Amino acid transporters + Prom 2816988 - 2817047 3.8 2681 1021 Op 1 . + CDS 2817079 - 2817255 285 ## PROTEIN SUPPORTED gi|227872333|ref|ZP_03990687.1| ribosomal protein S21 + Term 2817270 - 2817306 5.1 2682 1021 Op 2 . + CDS 2817354 - 2817947 609 ## COG4905 Predicted membrane protein + Term 2818011 - 2818053 7.0 + Prom 2817996 - 2818055 6.0 2683 1022 Tu 1 . + CDS 2818095 - 2819330 1262 ## COG4992 Ornithine/acetylornithine aminotransferase - Term 2819052 - 2819094 -0.1 2684 1023 Op 1 . - CDS 2819317 - 2819430 122 ## 2685 1023 Op 2 . - CDS 2819476 - 2820057 563 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 2820114 - 2820173 2.8 + Prom 2820424 - 2820483 7.0 2686 1024 Op 1 . + CDS 2820530 - 2821066 614 ## COG3760 Uncharacterized conserved protein 2687 1024 Op 2 . + CDS 2821115 - 2822821 1800 ## COG3044 Predicted ATPase of the ABC class + Term 2822824 - 2822878 21.2 - Term 2822812 - 2822866 21.2 2688 1025 Op 1 . - CDS 2822887 - 2824158 929 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 2824206 - 2824265 9.3 - Term 2824246 - 2824303 23.4 2689 1025 Op 2 . - CDS 2824314 - 2826101 1696 ## COG0006 Xaa-Pro aminopeptidase - Prom 2826181 - 2826240 9.8 + Prom 2826131 - 2826190 8.3 2690 1026 Op 1 . + CDS 2826211 - 2827011 715 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 2691 1026 Op 2 . + CDS 2827048 - 2827884 703 ## COG1408 Predicted phosphohydrolases + Prom 2827899 - 2827958 9.1 2692 1027 Op 1 21/0.000 + CDS 2828020 - 2828763 982 ## COG1354 Uncharacterized conserved protein 2693 1027 Op 2 . + CDS 2828784 - 2829362 641 ## COG1386 Predicted transcriptional regulator containing the HTH domain 2694 1028 Tu 1 . + CDS 2829477 - 2830667 1183 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Prom 2830690 - 2830749 5.2 2695 1029 Tu 1 . + CDS 2830789 - 2830878 135 ## + Term 2830911 - 2830979 10.0 2696 1030 Tu 1 . - CDS 2830972 - 2831838 922 ## COG0583 Transcriptional regulator - Prom 2831887 - 2831946 5.4 + Prom 2831910 - 2831969 7.4 2697 1031 Tu 1 . + CDS 2832023 - 2832511 618 ## COG2606 Uncharacterized conserved protein + Prom 2832795 - 2832854 6.9 2698 1032 Op 1 14/0.000 + CDS 2832902 - 2833978 1449 ## COG0468 RecA/RadA recombinase 2699 1032 Op 2 1/0.168 + CDS 2833981 - 2834595 687 ## COG2137 Uncharacterized protein conserved in bacteria 2700 1032 Op 3 . + CDS 2834668 - 2836221 1222 ## COG1418 Predicted HD superfamily hydrolase + Term 2836234 - 2836289 13.7 2701 1033 Op 1 . - CDS 2836358 - 2836489 211 ## 2702 1033 Op 2 . - CDS 2836553 - 2836618 69 ## - Prom 2836742 - 2836801 8.1 + Prom 2836704 - 2836763 9.1 2703 1034 Op 1 . + CDS 2836852 - 2837907 840 ## COG2706 3-carboxymuconate cyclase 2704 1034 Op 2 . + CDS 2837934 - 2839349 1519 ## COG0362 6-phosphogluconate dehydrogenase 2705 1034 Op 3 1/0.168 + CDS 2839291 - 2840733 1154 ## COG0364 Glucose-6-phosphate 1-dehydrogenase + Prom 2840845 - 2840904 7.9 2706 1035 Op 1 1/0.168 + CDS 2840948 - 2842144 1331 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 2707 1035 Op 2 . + CDS 2842182 - 2842721 654 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 2842740 - 2842799 3.6 2708 1036 Op 1 . + CDS 2842822 - 2843361 634 ## gi|225570682|ref|ZP_03779705.1| hypothetical protein CLOHYLEM_06782 2709 1036 Op 2 . + CDS 2843377 - 2844165 714 ## COG4974 Site-specific recombinase XerD + Term 2844175 - 2844208 5.2 - Term 2844128 - 2844168 2.3 2710 1037 Tu 1 . - CDS 2844235 - 2845599 1184 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 2845664 - 2845723 5.0 + Prom 2845623 - 2845682 5.3 2711 1038 Op 1 13/0.004 + CDS 2845729 - 2846187 574 ## COG1959 Predicted transcriptional regulator 2712 1038 Op 2 20/0.000 + CDS 2846211 - 2847392 1311 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 2713 1038 Op 3 1/0.168 + CDS 2847420 - 2847863 633 ## COG0822 NifU homolog involved in Fe-S cluster formation 2714 1038 Op 4 . + CDS 2847878 - 2848963 1163 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 2715 1038 Op 5 . + CDS 2848968 - 2849774 945 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Prom 2849813 - 2849872 2.6 2716 1039 Op 1 26/0.000 + CDS 2849912 - 2850925 909 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 2850948 - 2850986 7.5 + Prom 2851004 - 2851063 2.6 2717 1039 Op 2 13/0.004 + CDS 2851083 - 2852276 1515 ## COG0126 3-phosphoglycerate kinase 2718 1039 Op 3 8/0.008 + CDS 2852342 - 2853091 970 ## COG0149 Triosephosphate isomerase + Term 2853102 - 2853142 7.3 + Prom 2853097 - 2853156 3.9 2719 1040 Tu 1 . + CDS 2853181 - 2854722 1683 ## COG0696 Phosphoglyceromutase + Term 2854775 - 2854824 8.3 - Term 2854760 - 2854815 12.1 2720 1041 Tu 1 . - CDS 2854867 - 2859111 4031 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 2859179 - 2859238 7.8 + Prom 2859189 - 2859248 6.0 2721 1042 Op 1 . + CDS 2859335 - 2860204 900 ## Cphy_2901 hypothetical protein 2722 1042 Op 2 . + CDS 2860237 - 2861673 1631 ## COG0469 Pyruvate kinase + Term 2861677 - 2861714 6.2 + Prom 2862005 - 2862064 4.0 2723 1043 Tu 1 . + CDS 2862115 - 2863404 603 ## gi|225570697|ref|ZP_03779720.1| hypothetical protein CLOHYLEM_06797 + Term 2863405 - 2863439 -1.0 + Prom 2863421 - 2863480 5.5 2724 1044 Op 1 . + CDS 2863516 - 2864235 831 ## COG1378 Predicted transcriptional regulators 2725 1044 Op 2 . + CDS 2864232 - 2865509 1371 ## COG0019 Diaminopimelate decarboxylase 2726 1044 Op 3 . + CDS 2865578 - 2866213 874 ## gi|225570700|ref|ZP_03779723.1| hypothetical protein CLOHYLEM_06800 + Term 2866305 - 2866371 30.0 + TRNA 2866279 - 2866361 64.9 # Leu CAA 0 0 - Term 2866505 - 2866547 1.0 2727 1045 Tu 1 . - CDS 2866612 - 2869845 1284 ## Elen_1195 hypothetical protein + Prom 2869834 - 2869893 5.6 2728 1046 Tu 1 . + CDS 2870006 - 2870140 65 ## gi|225570703|ref|ZP_03779726.1| hypothetical protein CLOHYLEM_06804 + Prom 2870153 - 2870212 7.1 2729 1047 Op 1 . + CDS 2870235 - 2870750 92 ## gi|225570704|ref|ZP_03779727.1| hypothetical protein CLOHYLEM_06805 2730 1047 Op 2 . + CDS 2870692 - 2870835 147 ## 2731 1047 Op 3 . + CDS 2870914 - 2871804 991 ## HS_1632 large adhesin + Prom 2871806 - 2871865 6.1 2732 1047 Op 4 . + CDS 2871944 - 2872573 621 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 2872600 - 2872653 19.3 - Term 2872587 - 2872641 15.7 2733 1048 Tu 1 . - CDS 2872642 - 2874927 2251 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 2875018 - 2875077 8.7 + Prom 2875084 - 2875143 5.9 2734 1049 Op 1 4/0.036 + CDS 2875171 - 2877786 3029 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 2735 1049 Op 2 . + CDS 2877802 - 2878395 648 ## COG0237 Dephospho-CoA kinase 2736 1049 Op 3 . + CDS 2878447 - 2879244 880 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 2737 1049 Op 4 9/0.008 + CDS 2879263 - 2879535 457 ## COG3830 ACT domain-containing protein 2738 1049 Op 5 . + CDS 2879566 - 2880930 1702 ## COG2848 Uncharacterized conserved protein 2739 1049 Op 6 . + CDS 2880943 - 2881794 997 ## COG1307 Uncharacterized protein conserved in bacteria - Term 2882429 - 2882463 1.1 2740 1050 Tu 1 . - CDS 2882605 - 2883888 1266 ## COG1323 Predicted nucleotidyltransferase - Prom 2883913 - 2883972 8.3 + Prom 2883875 - 2883934 8.1 2741 1051 Tu 1 . + CDS 2883997 - 2885439 1823 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 2885529 - 2885568 6.8 + Prom 2885513 - 2885572 5.4 2742 1052 Op 1 21/0.000 + CDS 2885605 - 2886606 1392 ## COG0280 Phosphotransacetylase 2743 1052 Op 2 1/0.168 + CDS 2886642 - 2887832 1547 ## COG0282 Acetate kinase + Prom 2887856 - 2887915 5.7 2744 1053 Op 1 . + CDS 2887936 - 2888469 188 ## PROTEIN SUPPORTED gi|170754849|ref|YP_001782001.1| ribosomal protein L32 family protein 2745 1053 Op 2 . + CDS 2888473 - 2888652 277 ## PROTEIN SUPPORTED gi|227872300|ref|ZP_03990657.1| possible ribosomal protein L32 + Term 2888667 - 2888704 6.0 + Prom 2888740 - 2888799 4.8 2746 1054 Op 1 . + CDS 2888826 - 2888936 208 ## 2747 1054 Op 2 . + CDS 2888979 - 2889056 83 ## 2748 1054 Op 3 20/0.000 + CDS 2889100 - 2890827 1776 ## COG2060 K+-transporting ATPase, A chain 2749 1054 Op 4 18/0.000 + CDS 2890855 - 2892921 2116 ## COG2216 High-affinity K+ transport system, ATPase chain B 2750 1054 Op 5 15/0.000 + CDS 2892934 - 2893581 758 ## COG2156 K+-transporting ATPase, c chain 2751 1054 Op 6 . + CDS 2893681 - 2895720 1675 ## COG2205 Osmosensitive K+ channel histidine kinase 2752 1054 Op 7 3/0.052 + CDS 2895780 - 2896802 1128 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 2753 1054 Op 8 7/0.008 + CDS 2896838 - 2897071 311 ## COG0236 Acyl carrier protein 2754 1054 Op 9 6/0.016 + CDS 2897131 - 2897826 844 ## COG0571 dsRNA-specific ribonuclease 2755 1054 Op 10 . + CDS 2897834 - 2898416 648 ## COG1196 Chromosome segregation ATPases Predicted protein(s) >gi|224461045|gb|GG657759.1| GENE 1 166 - 678 674 170 aa, chain + ## HITS:1 COG:CAC0845 KEGG:ns NR:ns ## COG: CAC0845 COG1528 # Protein_GI_number: 15894132 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Clostridium acetobutylicum # 12 170 12 170 170 194 59.0 8e-50 MLDKKVVELINDQINKEFYSAYLYLEFSNFYFDMGLEGFGNWYKVQTQEERDHAMLMIQY LQNNGEKVVLQTVDKPDIPLGDAKGVLEEGLKHERYVTSLIHNIYDAAYSVKDFRTMQFL DWFVKEQGEEEKSAEDLIKRFELFGEDAKSLYMLDSELGTRTYTAPSLVL >gi|224461045|gb|GG657759.1| GENE 2 959 - 2353 1575 464 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567829|ref|ZP_03776854.1| ## NR: gi|225567829|ref|ZP_03776854.1| hypothetical protein CLOHYLEM_03902 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_03902 [Clostridium hylemonae DSM 15053] # 1 464 14 477 477 843 100.0 0 MKRKLLVFGLLVSLILTVVLAAAGCGKKATPENLLADVNKNIKEIKSVSANMNVTAEMSV DSKTAGIVMDMDIDSTRKPAATHMKGSLSFKADGSDMSTDVEVYAVEEDDELAAYTYARG EWSRTGSDNVDNALDENVFKAISKAHASFEKKDKLVEVNGKDCFELEGKVKGKVLNAVIG EGMLNSFDPSGSMIDEEELGKKTIPCTIDIYKDKVLPARIHVDLKKVAEEIYADAYDKLE VKDYYVEINYLGYDEVEKIKVPKEAREAAGGSSPDFDDNTGSKEKGNGKKESSPAGQSKE LKDEWNSYTVQVNDKVLTLPCKIEDLEAAGLSMDTVNTPEDYIVNAGEYELAFFEDNNGN SIMVDMVNQTDSACKVSECLIGGIQADKYSVEAGELSVIFPGGIQIGDDEAKVLSKYGET DDEYKGESSSDYSWYDDGSYENRCQIIVDAKEKTVSQMTLIRHE >gi|224461045|gb|GG657759.1| GENE 3 2543 - 3262 582 239 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 210 2 209 234 103 27.0 4e-22 MKIAVCEDNVKERELLCEQIRTAMELRDVNAEVEIFETAEELLKAAEKTFFSMFFLDILL PGLSGMDAALKLRRAGNYSPVVFTTVTKDYLAQSYSVWAAHYLVKPIEQRDMEEAFSRAL KMLEGTERKLELTVARHTEQIPYSEIYYVEGNNRNCIVHTRTGTHTPYTSLLGIVEKLDD KRFLHCHRRYVINLDHVLAVQRSKVAMRDDVLLPIRRGEAEQIRRAWEDRRFEIVNGRE >gi|224461045|gb|GG657759.1| GENE 4 3389 - 4489 1090 366 aa, chain - ## HITS:1 COG:mll9130 KEGG:ns NR:ns ## COG: mll9130 COG3535 # Protein_GI_number: 13488077 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 36 366 39 358 361 106 26.0 9e-23 MSRILHKQDFIEMCHGAVLRSDGGDYPLRCALEEIERIDREKPIEIELVDVDEMDEDLYA VTVGKLGPVSTDAAVCHDSRDGMIALRKMQELMEAKGKKIGYLYTLEHDCIQLPYFLKVA SQAGLPLLNADSCGRSVPTLSNILTCVYRHPVSPLVYASIYGESVVIETPDPCDTAAMEL IGRSIVVAYNNILIAYCLPPLDKAGCRECLVAGSAASLQETGKALLRAKEDRTDPVEEVL KVIDGKFLCKGKISEKEWVCRDGFDFGRTTVDTGEGTYTLLVQNENLALREDSTGKLLLT APDSIGMIHLERGEGITNDELEIGMELAIIGIKAAEPWYRIPEGFSCWDDVFRNIGLDNV EHVPFD >gi|224461045|gb|GG657759.1| GENE 5 4508 - 5794 1267 428 aa, chain - ## HITS:1 COG:lin0473 KEGG:ns NR:ns ## COG: lin0473 COG1457 # Protein_GI_number: 16799549 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Listeria innocua # 23 391 9 377 427 249 36.0 5e-66 MNSEQEKNSLFEEDAFKPVPPGERHGWWKTSFIWAGSSICVPTIMVGALMIKGLSFMEMI LAVIIGTVLLSIVFCLQGMEGTDTGLPTVVLARSAFGREGAGIIISFILATTLICWTGSD CQIAGESFIQILTLNNIHWNREATIIILGIIMLTVSILGEKIISKLNIIAVPALILLCIY GIVTCLQDISFLDLVRSSPVEPVSLAEGVAMVFGMQAVGSTISPDYHRFCRDRKSSCLAA VVGIIPYCLFLFIAGSIMGAATGESDISILIAKLGLPVIGLLILVLATWTTMACDAYTGG LAITSLLHLSGKRRAAATAIAGIVGILLAVFGIMNYFTNFLDLMAGCIPPVAGVMITDYW ILKRGKVENWEERPGFHWTGIVCLVCGVLAALFLPFGFATINGIVVSGVLYYAAMKLTDR KEPRRDIV >gi|224461045|gb|GG657759.1| GENE 6 5828 - 7270 327 480 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 15 463 16 448 468 130 27 3e-28 MDVTKESISCQQEQMSRGNLSSKELTAAYLKRIQQYDQNGPKINAVAELNPDAIFTAEAL DRERMLRGPRGPLHGIPVLLKDNISTGDKMHTTAGSEALADNFARKDAPLVKQLRKAGAV ILGKANLSEFARYIAQEFPDGYSSRCGQVKNPYDASFPVSGSSSGSAAAAAGCFCSAAVG TETAGSITYPSIFSGICGLKPTVGLVSRSGIIPICGQDTAGPMARTVTDCAILLSAMTTG PDADDAATGCTEHLIPKDYTVFLKPEDFRGMRIGVNRVRCDKESFPEDSDDMFEKELLLM QQAGAELVDCDIAFTGMDSGILGQATMLYEFKTALNFYLSRYAAGQCRSLADIIAYNQRH AKTALRYGQDLLLLAQEQTTGRLVESSYWSQKFRAIEEGQAALDTCLSQYELDVITSPCY SNLPAITGYPSITVPMGLSRSGVPAGISFYAGAFQEGKILTAAYGYEQVSKRRIPPAFDR >gi|224461045|gb|GG657759.1| GENE 7 7510 - 8277 635 255 aa, chain + ## HITS:1 COG:no KEGG:ELI_3461 NR:ns ## KEGG: ELI_3461 # Name: not_defined # Def: transcriptional regulator # Organism: E.limosum # Pathway: not_defined # 30 251 9 230 232 88 27.0 2e-16 MCIILWKMDSARYLRDCRCEGAMAMDRVKQVGERIRFYRKQEKMTLEMLAAKMNKSKATI SKYENGTIVMDIGTLYDFADVFRIPVYCLIDDTRKETGVHGHMPFSSSILYFYIFKGSGN REIAESYLSLAEKDGECQVTLYYGGLPDKRNKSCLVYIGKGCGTDTTFSFMVTNYQNPLD QMYFTASLPYINWNGYLAGFWVGLTFEGVTPICMKAVISETSMEDRETLRKLLTVTNAEL NYFKKHDKFLLRSED >gi|224461045|gb|GG657759.1| GENE 8 8353 - 9549 1228 398 aa, chain - ## HITS:1 COG:CAC1720 KEGG:ns NR:ns ## COG: CAC1720 COG0452 # Protein_GI_number: 15894997 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Clostridium acetobutylicum # 6 396 4 396 398 348 46.0 1e-95 MLLKGKTILLGVSGGIAAYKSACLASRLVKSGAEVHVLMTEHARNFINPVTFETLTGNKC ITDTFDRNFEFNVEHVALAKKADSVIIAPATANVIARLAHGLADDMLTTTVLACQCPKII APAMNTRMYENPVTQENLKLLEKFGMEVISPASGRLACGDTGSGKMPEPDILLQYVLKSC ALPKDMAGLKVLVTAGPTQEAIDPVRFITNHSSGRMGYSIARMCMLRGADVTLVSGQTAL DPPLFVNTIPVISAMDMFHAVTSNSQDKDIIIKAAAVADYRPAHVSDEKVKKADSEMSLA LERTDDILKYLGEHKVPGQFLCGFSMETEHMIENSRKKLINKHLDMIVANNLKEEGAGFA GNTNVVTFITPDTQTELGVMDKEDVAMCLLDEILKRIR >gi|224461045|gb|GG657759.1| GENE 9 9775 - 10431 936 218 aa, chain + ## HITS:1 COG:CAC0331 KEGG:ns NR:ns ## COG: CAC0331 COG4684 # Protein_GI_number: 15893623 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 8 206 9 192 192 95 37.0 7e-20 MKERKHDTRWMVSVALMAAIVIVLANTPLGMIQLPIIKATTVHIPVIIGAVLLGPGAGAV LGGVFGICSLVSNTMAPTLLSFAFSPFMSTTGLAGAAKAVWISVGCRILIGVAAGWLWIL LTRLKVNQLIALPIVGFIGSLVNTVTVMGSIYVLFAQQYADAKQVGITAVWGLIMGTVTA SGIPEAAAAAILVLALGKVLIQVTKKMNFGTISAQAVR >gi|224461045|gb|GG657759.1| GENE 10 10655 - 13192 2507 845 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 429 841 345 754 776 202 31.0 2e-51 MAADNIFANELMRNILNRLYTNIFVTDAETDEIIYMNDVMKETFGLEHPEGHPCWQVLQK DMKARCGFCRIGELLGEKDRKLCIWDEKNVLSGRVYRNYDSLIELGGKTYHIQNSMDITN RMTFSDTANIDELTELWNRRAGKEKLRQLLEQAKKEKKTTVVALFDINELKSVNDRFGHL EGDRFLRYAATAVREVLREKDLALRLSGDEFVVAFYAESSEEADANMHRIQDGLKEMEKQ YGLSYRMGFSYGLMEVYPEDSYTVTQIIAKADSQMYIQKRRYHIEQAKQRLRDIDYGRDT VFQYDKDHLYTALTASTDDYIFVGNMKTGVFMYPPAMVREFGLPGPVLENAAAFWGELIH PHDESRFLESNQEIADGRTEYHNIEYRARNVRGEWIWLRCRGKMVRDVQGMPELFAGFIT NLGRREQIDHMTGLYNRFKFEGAVKKHLVSRTVSHVGIMILDMDTFKDINDLYNRSFGDE ILRMTAEKIRSVLPENASAYRLDGDEFGIVLLNGEKKAYDKLYTDIQEELERQKEWNGRK YHCTVSAGYAVYPEDADNYLDLIKYSDYALEESKRQGKNRLTVFTRDIIFERTRRLKLTE LLRECVGRGFAGFDVYYQPQVESATGRLYGAEALARWNCPDYGNISPVEFIPLLEKSGLI VEFGRWVFRQAVLQCREWRKRCPDFNISINLSYVQVIQDDVVGFVESVLSETGLKPQAVT LELTESYLAKEDKLVKDCMESLKDQGLLIAMDDFGSGYSSLKSLKTIPANIVKIDREFTA GITSDAFNMSFIRAITELCHKVGKTVCLEGVETEEEYRMVSGSGLELIQGYYFGKPVKAE EFPIA >gi|224461045|gb|GG657759.1| GENE 11 13297 - 14106 930 269 aa, chain + ## HITS:1 COG:ECs3753 KEGG:ns NR:ns ## COG: ECs3753 COG1319 # Protein_GI_number: 15833007 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli O157:H7 # 4 255 2 244 259 69 25.0 8e-12 MFSVNQYVKAKSLKEAYELNQARNSRVMGGMMWMRLTNARVQTIIDLSGLGLDEIEETDH VFKIGAMCTLRTLEQHEGIREMYGGAVAEALRHIVGVQFRNQATVGGSIYGRYGFSDVLT CLLALDTFVELYNGGTIRLSEFVSHRPDNDILVSVIIRKRERKLRYASVRRTATDFPVLS CAVVTGLLHGEEYWYVSVGARPMRASLLEKAWKISGGTSEEQIAAYAKEAAAQFSYGSNM RGSAQYRRQLAEILIRRAVTSIVTEDEKE >gi|224461045|gb|GG657759.1| GENE 12 14103 - 14573 508 156 aa, chain + ## HITS:1 COG:SSO2433 KEGG:ns NR:ns ## COG: SSO2433 COG2080 # Protein_GI_number: 15899181 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Sulfolobus solfataricus # 3 143 15 157 171 126 44.0 1e-29 MIVQFTLNGKEAEADIRPDAILLDVLRELGCSSVKCGCETTNCGLCTVWIDGVSRLSCSV LAASVEGRKITTLEGVGKEAEEFGAFLAAEGAEQCGYCSPGFIMNVLAMVRELSDPSIDE IKEYLSGNLCRCTGYMGQLRAIQKYLKAREEGRACV >gi|224461045|gb|GG657759.1| GENE 13 14564 - 16834 2643 756 aa, chain + ## HITS:1 COG:Z4220_2 KEGG:ns NR:ns ## COG: Z4220_2 COG1529 # Protein_GI_number: 15803418 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli O157:H7 EDL933 # 1 751 3 783 790 460 35.0 1e-129 MRVVNQSVRKVDHKALVTGKAVYTDDLAPKECLIVKVLRSPHAHALIKEIDLEKAGKVPG IECILTYEDCPDKRFTMAGQTYPEPSPYDRLILDRRVRFAGDAVAIVAGCTKDAVDKALR LIKVKYEVLEPVLDFRTAKDNGILVHPEDNWKSLCPVGADNKRNLCASDVCADGDVDSVL DGCEYVVDQTYHTQANQQSMMETFRTYTYIDAYGRLNVVSSTQIPFHVRRILANALDIPK SRIRVIKPRIGGGFGAKQTVVSEVYPALVTWVTGKPSKMIFTREESLTASSPRHEMEVRV RIGADKDGFIKAIDVYTLSNTGAYGEHGPTTVGLSGHKSIPLYGKAEAFRFAYDVVYTNV MSAGAYRGYGATQGIFAVESAVDELAAKMGEDPAALREKNMVREGQVMPAYYGEKAESCA LDRCLERAKEMIGWDGKYPRRDMGNGKVRGVGAALAMQGSGISGVDTASVGIKVNDDGFY SLMIGATDMGTGCDTILAQMAAECLDCSMEEIIVHGVDTDASPYDTGSYASSTTYVTGMA VVRTCETLRDLIREKGAQYLGCDADDTEFDGENVIDLKTGEMISRADIGNRVMCSNQNAL YASEAFSSPVSPPPFMAGIAEVEVDKETGQVELLDYVAVVDCGTVVNPALARVQTEGGLA QGIGMALYEEVVYGSQGKNYSNSFMQYKIPTRLDVGNIRVEFESSYEPTGPFGAKSIGEI VINTPSPAIANAVYNAVGVRIRELPITAEKIYWGMH >gi|224461045|gb|GG657759.1| GENE 14 16929 - 17579 547 216 aa, chain - ## HITS:1 COG:no KEGG:Closa_3092 NR:ns ## KEGG: Closa_3092 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 9 210 49 250 258 162 44.0 8e-39 MIKYIRLHLNRIFLICGLAMAASEIWKQLCLTFIVNSGHYYWWYFPFQLCSIPMYICLIL PWTTSVRLRKVLLTFLMDFGLLGGIFTFFDTSGLHYPYPPLTVHSFAWHILLILLGLTAG LAVEGGCTWRDYGRCTALYGGACIIATILNMLFYRFGAINMFYISPHYYMTQVIFKDIAA SLGNTAGIFVYIAAILAGAAVFHMLWRLARRHMNIQ >gi|224461045|gb|GG657759.1| GENE 15 17745 - 18647 865 300 aa, chain + ## HITS:1 COG:CAC0076 KEGG:ns NR:ns ## COG: CAC0076 COG0697 # Protein_GI_number: 15893372 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 4 298 7 296 303 238 44.0 1e-62 MRPKNAFMLILTAFIWGTAFVAQSVGMDYLGPFTFNGVRSFIGGAALLPCIFLLERFNEK NSSAAPVKGSRKELIAGGTLCGLLLFAASSLQQLGIQYTTAGKAGFITAFYIVIVPVLGI FLRKKTGIKVWTAVLIALTGLYFLCITETFTIGKGDVLLFFGALIFSVHILVIDYYSPRV EGVKMACIQFFVCGAASLVPMFALETPKAADMAEGWLPLLYAGVLSCGVAYTLQIIGQKN VNPAIASLILSLESCFSVLAGWIILGETLSVRESVGCVLMFAAIVLAQLPDKKKEEVQYG >gi|224461045|gb|GG657759.1| GENE 16 18640 - 19134 658 164 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_2155 NR:ns ## KEGG: EUBREC_2155 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 161 12 168 174 174 54.0 1e-42 MDNELLMNMTEYYAGQPNRIQHFMKVYAYSRMLGEMEGLDSRTQHILEAAAAVHDIGIRR SEELYGDCSGKHQEELGPEEAEKMLTGLGYGRELTERVCFLVGRHHTYTDIDGMDHQILV EADFLVNLFENEDGINKKAVENALERIFVTKSGKAVLKTMFLAE >gi|224461045|gb|GG657759.1| GENE 17 19149 - 19595 561 148 aa, chain + ## HITS:1 COG:CAC2273 KEGG:ns NR:ns ## COG: CAC2273 COG1490 # Protein_GI_number: 15895541 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Clostridium acetobutylicum # 1 148 1 148 149 150 51.0 8e-37 MRFVIQRVSESTVKVDGEVIGQIGKGFMVLIGVSDSDTKETADKMVKKMLGLRIFEDEQG KTNLSLDTVGGGLLLISQFTLYANCKKGNRPSFIEAGGPEMAEEMYQYIIDRCSEQVEVV EHGRFGTDMKVSLTNDGPFTIILDSDQL >gi|224461045|gb|GG657759.1| GENE 18 19802 - 20305 635 167 aa, chain + ## HITS:1 COG:SMc02976 KEGG:ns NR:ns ## COG: SMc02976 COG1846 # Protein_GI_number: 15966621 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 34 141 53 160 167 59 30.0 3e-09 MNENKDNVPVYVILHRLIHMSKYQAFKRLDDFDLKPSQAGILFVLSCNGKLSQRELAEKI GITPPSMTVALRKMENRGYIKKEPDEKDQRIIRILLTEKGEDCVEDIRAVVDKMEAVLYR NMTQEEKMLLRRLLLQMQENLLDSKEFKGMDMALIMERTRPTLKDRI >gi|224461045|gb|GG657759.1| GENE 19 20327 - 22684 2624 785 aa, chain + ## HITS:1 COG:CAC3282 KEGG:ns NR:ns ## COG: CAC3282 COG1132 # Protein_GI_number: 15896527 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 243 778 51 584 584 578 53.0 1e-164 MSKLLKFLKPYAGAVLAILCVLIVQAYCDLSLPTYTSEIVNVGIQQGGISETIPEEIGEK DLDKLLLFVASDRQDTVRDAYEVSKKEYDYDGKVYTLKKSVRDDEKKLEKLTGILGKPML LVSGFESGSDMTKKMQDEMKSQMQSQMQAQVEAQVNEQIEARTAGQNLPEEAKEQMKQQA LEQAKSQLPDVGSMSVFEMFENMEPEQRDEAVAQIEKNMVSMPETMVEQAAASYIKTAYG NLGINVDDIQNHYVLYTGGKMLALAALGMLASILVGLLASRVGASVGRGLRGDVFKKVVG FSNGEFDKFSTASLITRSTNDIQQIQMLSVMILRMVLYAPIMAVGGIWKVFNTNADMSWI IALAVGLILCVVVTLFVVVMPKFKIVQSLVDRLNLVSREILTGLPVIRAFSTEKYEEKRF DKANMDLTRVNLFVNRAMTFMMPTMMLIMNGITVLIVWSGAHNVNDGTMQVGDMMAFIQY TMQIIMSFLMICMISVMLPRAAVSAVRVDEVLRSSTLIHDPENPEALPQDGKGEVTFDHV SFRYPGAEEDVLHNLTFTAKPGETTAIIGSTGSGKTTLVNLIPRFYDVTEGQVLVDGKDV RSISQHELRGQLGFVPQKGILFSGDIASNIMYGNPGGSEEEMREAAQIAQAAEFIDNKKK KYESPISQGGANVSGGQKQRLSIARAIAKHPKVYIFDDSFSALDYKTDVKLRNALKEKTA ESTVIIVAQRISTILHAEQIIVLDDGVIAGIGTHKELLKNCDAYYQIASSQLSEKELSED MKEVG >gi|224461045|gb|GG657759.1| GENE 20 22686 - 24533 206 615 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 363 598 119 353 398 84 28 3e-14 MAETGQTGRRRGPMGGPHGAAMAGEKARDFKGTMKKLMNYMGKYKIAIFFVFIFAIGGTI FNILGPKILGKATTEIFNGLVGKVSGGSGIDFTRVAEILITVLCLYVVSAAFSFIQGYIM TGISQKMTYRLRKEISEKINRMPMNYFDKMTHGEILSRITNDIDTLGQSLNQSATQVITS VTTIIGVLVMMLSISPLMTLIALLILPISMGLISAIVKRSQKYFKNQQEYLGHINGQVEE VYGGHNIVKVFNKEGDVIDTFDETNEILYQSAWKSQFLSGMMMPVMQFVGNLGYVGVTIL GGYLAIKKTIEVGDIQSFIQYVRSFTQPIQQVAQVANMLQSTAAASERVFAFLEEQEEDQ TVSDPVSVDGLDGRVEFEHVHFGYNPDHTIINDFSARIEPGQKIAIVGPTGAGKTTMVKL LMRFYDVNSGSIKVDGHDIRDFNRSELRQLFGMVLQDTWLFKGSIEDNIRYGRLDASHEE VVEAAKAAHVHRFVQTLPNGYEMELNEEASNVSQGQKQLLTIARAILADPKILILDEATS SVDTRTEVRIQKAMDNLMKGRTSFIIAHRLSTIRDADLILVMKDGDIIEQGNHEELLAQN GFYAELYNSQFERSA >gi|224461045|gb|GG657759.1| GENE 21 24672 - 25478 588 268 aa, chain + ## HITS:1 COG:CAC0535 KEGG:ns NR:ns ## COG: CAC0535 COG1237 # Protein_GI_number: 15893825 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily II # Organism: Clostridium acetobutylicum # 1 266 1 266 268 296 51.0 2e-80 MKLRVLIDNNTYIDQYFLGEPALSYYIESGDKRILFDTGYSDAFMYNARKMGIDLGNLTH IILSHGHNDHTGGLAYLKEKFDLKETELIAHPACFNEKKAPEGNIGAPVTEKEMRSLCRL NLKKEPFWVDEEMVFLGEIQERLPFEKRKCMGQCRDGGSWEADHVTEDSAAVFKTPKGLF IVTGCSHSGICNIIEQAKDVCRCGRIAGVIGGFHLFNVDERLEDTIRYLRQTDAEMLYPC HCVSFAVKAKMNETMPVREVGTGMTIEL >gi|224461045|gb|GG657759.1| GENE 22 25525 - 26115 622 196 aa, chain + ## HITS:1 COG:DR0704 KEGG:ns NR:ns ## COG: DR0704 COG1896 # Protein_GI_number: 15805731 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Deinococcus radiodurans # 3 142 4 144 198 106 46.0 3e-23 MDRLDQQFEFIREIDKEKFIGRQTYLSDGLRKENDAEHAWHMAVMTLLLSEYANDEIDVL KTISMLLIHDIVEIDAGDTYAYDEEAKSTQEAREQKAAERIFGLLPEDQGRKMKSLWEEF EERKTPEARFARTMDNIQPVMLNAAADGKAWREHKVRLEQIMKRNECTRTGSEQLWEYAR SEFIEPNVEKGNIDTK >gi|224461045|gb|GG657759.1| GENE 23 26185 - 26445 279 86 aa, chain - ## HITS:1 COG:no KEGG:CPE0254 NR:ns ## KEGG: CPE0254 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 4 77 3 76 82 68 48.0 8e-11 MFDDKTMVSDALAGVNGELTRFGEMISQTENKELKQCLKQMRNECEMSQEKLYQVAREKS YYVPAAKATQQEVDHVKSVLTGLSMK >gi|224461045|gb|GG657759.1| GENE 24 26458 - 26640 215 60 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_0015 NR:ns ## KEGG: Dhaf_0015 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 1 60 1 60 61 67 55.0 2e-10 MSEISVLDLQNLRHLIGGYDTSHCKMTEYANEAKDPEVKKLFQDAANSAMKNKQDLMKFL >gi|224461045|gb|GG657759.1| GENE 25 26699 - 27421 382 240 aa, chain - ## HITS:1 COG:CAC1764 KEGG:ns NR:ns ## COG: CAC1764 COG2071 # Protein_GI_number: 15895041 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Clostridium acetobutylicum # 1 232 1 240 241 164 34.0 1e-40 MNPIIGIVSCGFMNERQFVPQTYIHAVEASGGTPVLLPCTSQEETYAGYTDICDGFLFCG GDDVTPFLFGEELLTDRGHTDLNTDRSHLSLMRHIIDSKLPLLAVCRGMQILNIASGGTI YQDISLRPSPSINHVQLSQSRADVSHKVTLSSNSLLYNICGESLYTNTFHHQCIKTVGED LRITGITADGMIEAVESVTHPFRLGVQWHPECMYCTSAAMQKLFHEFIKFSSNSKVIHVV >gi|224461045|gb|GG657759.1| GENE 26 27553 - 28530 1110 325 aa, chain + ## HITS:1 COG:SPCC965.12 KEGG:ns NR:ns ## COG: SPCC965.12 COG2355 # Protein_GI_number: 19076022 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Schizosaccharomyces pombe # 34 318 63 355 416 134 31.0 3e-31 MKLIDMHCDTVWKLMDLGGEGDLMTGSCDVTIPRMRQAGTLAQFFACFGYLDDFKDKGGY DACYRHILDMAAYLKEQTEIHKNDIALARSADDICRNARSGKISAVLTVEEGGVLNGDLE RLDVLYDQGVRLITLMWNYENCIGYPNSRDASVMWQGLKPFGIEVVEKMNDKGMIIDVSH ASDGTFRDVMEYAPGAVVASHSNCRALCDHPRNLTDEMIRRLANEGGIAGLNLYGPFLGT QDESRLDEMTAHVLHMIDVGGSEFPAIGTDFDGFDGMKTLDIPDAGQMELLWEALKKKGL GEDQLDKIWSGNVLRVFKSLRDLQQ >gi|224461045|gb|GG657759.1| GENE 27 28686 - 28892 166 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225567855|ref|ZP_03776880.1| ## NR: gi|225567855|ref|ZP_03776880.1| hypothetical protein CLOHYLEM_03928 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_03928 [Clostridium hylemonae DSM 15053] # 9 68 1 60 60 91 100.0 2e-17 MFSIKKSEMITKTFRLPAETLKKLEELAQKNNISLNNLIIQCCEYALENLEPCAEEKSSG ENPDAKKS >gi|224461045|gb|GG657759.1| GENE 28 29061 - 29258 265 65 aa, chain + ## HITS:1 COG:no KEGG:Sbal223_2624 NR:ns ## KEGG: Sbal223_2624 # Name: not_defined # Def: hypothetical protein # Organism: S.baltica_OS223 # Pathway: not_defined # 9 63 30 84 142 63 49.0 4e-09 MDSTASLGFAGIFLIIIGIAAYFIPTIIAFKKERDNKVSILALNLLLGWSMIGWVVSLVW ALKEA >gi|224461045|gb|GG657759.1| GENE 29 29267 - 30163 554 298 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567857|ref|ZP_03776882.1| ## NR: gi|225567857|ref|ZP_03776882.1| hypothetical protein CLOHYLEM_03930 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_03930 [Clostridium hylemonae DSM 15053] # 1 298 1 298 298 598 100.0 1e-169 MPDRDKKEARQKPKTGLVLSGGMLKGAYQIGALRNIRERFAGLPFSFISAASIGALNSYA FLTDRLDMAEQLWQESAAHHSELTRLVKSSYIDEVISAIYKPGNLPSDFYVPLFNSGRHS LEYVLMNGLESEEIRLGLKAGVSLPPFQSGVRLRGESYYDGALIDNIPVGPLLEKELDYI ICIYFDNRNYIFENVEFDKKVIKLNFSGDSFIKSSFWADTGEIREMMNIGYEKTDMLLEK VFRRGVDDVSYIIEKNIWLNKAYSGEKTRLSGDVVVNRLNKVARKFVKMGTVQTRRKE >gi|224461045|gb|GG657759.1| GENE 30 30172 - 30648 538 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567858|ref|ZP_03776883.1| ## NR: gi|225567858|ref|ZP_03776883.1| hypothetical protein CLOHYLEM_03931 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_03931 [Clostridium hylemonae DSM 15053] # 1 158 5 162 162 289 100.0 5e-77 MKRLLAVILAACIVLSGCKAVQGEENLYETPEDTVSQIESALNDKDEKALIACFDKNVQK VLSGGTKVVSSLLGVDTEGVFEIVAGLYGMSESEIQCADYELTVMDVVYDGDKNCVVYVH GKAVNSTGETAEGDFEMPLKLQKEQWKIKVTLKDLGLE >gi|224461045|gb|GG657759.1| GENE 31 30651 - 30914 208 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567859|ref|ZP_03776884.1| ## NR: gi|225567859|ref|ZP_03776884.1| hypothetical protein CLOHYLEM_03932 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_03932 [Clostridium hylemonae DSM 15053] # 1 87 1 87 87 150 100.0 3e-35 MGIIIIFLLVIYMLPSIIASCKNHLELKAVLCVNVFLGITGIGWITALIWAISDSRVHYL KKNKEKLETGLISLQEYEENLKKIDKK >gi|224461045|gb|GG657759.1| GENE 32 30994 - 32214 1533 406 aa, chain - ## HITS:1 COG:CAC0973 KEGG:ns NR:ns ## COG: CAC0973 COG0137 # Protein_GI_number: 15894260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Clostridium acetobutylicum # 1 402 1 398 400 456 55.0 1e-128 MKEKVVLAYSGGLDTTAIIPWLKENFDYEVICCCVDCGQGEELDGLEERAKLSGASKLYI EDIVDDFCDNYVVPCVQAHAVYENKYLLGTSMARPAIAKKLVEIARKEGATAICHGATGK GNDQIRFELGIKALAPDIKIIAPWRMTDVWTMDSREDEIEYCRQHGIDLPFDASQSYSRD RNLWHISHEGLELEDPANEPNYEHLLVLGVTPEKAPDEGEYVTMTFEKGVPKSINGESMK VSDIIRKLNELGGKHGIGICDIVENRVVGMKSRGVYETPGGTILYEAHQQLEELVLDRAT YETKEEMGNKLSQIVYEGKWFTPLREAVQAFIESTQEYVTGEVKFKLYKGNIIKAGTTSP YSLYSESLASFTTGELYDHHDAEGFINLFGLPLKVRALKMQETDKK >gi|224461045|gb|GG657759.1| GENE 33 32521 - 32628 64 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDHSDIINNVNSPLLSAGSVVFVPCIPYPLGVLHA >gi|224461045|gb|GG657759.1| GENE 34 32781 - 33773 1112 330 aa, chain + ## HITS:1 COG:lin1228 KEGG:ns NR:ns ## COG: lin1228 COG0263 # Protein_GI_number: 16800297 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Listeria innocua # 4 267 2 265 276 223 44.0 3e-58 MDFRQALKEKKKIVIKIGTSTITYPETGNINLDKLEKFVRILINLRNKGREVIVVSSGAV GIGRNVLGFTKRPKEKDVRQACAAVGQGRLMMMYEKLFAEYSQLTAQVLLTKESITNEVC AANARNTFDRLAAMNVVPIVNENDAISVDEELYGNFGDNDTMAAHVAALVEADLLILMSD IEGLYTDDPKDNPYARFVHTVGKIDRELEEMGKGAGTAVGTGGMATKIEAAKIATGAGAD MVIASGDNIYTINDIMAGKKIGTLFLSCGSGYTGKNELAPEREQFRRQAKRMKKEAVRKD TSEKDTSEKDRSIKQVELGGAYYGLRAGNW >gi|224461045|gb|GG657759.1| GENE 35 33748 - 34995 1355 415 aa, chain + ## HITS:1 COG:L0116 KEGG:ns NR:ns ## COG: L0116 COG0014 # Protein_GI_number: 15673590 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Lactococcus lactis # 4 414 2 413 413 452 57.0 1e-127 MGYVQEIGRKAKEASKKVQFFGQSEKNEGLEAVARELRQQMGYLLVENDKDVKNARAAGM KPALIDRLLLTSQRIQAMSEGLEQIAMLEDPVGQMERVKIRPNGLQIGQRRVPLGVVGII YESRPNVTADAFGLCFKTGNSVILRGGSDAIHSNKAIVKVIRDGLAKEKLPADAVLLLED TDRAAVTEMMRMKEYIDVLIPRGGAGLIASVVENSTVPVIETGTGNCHIFVDESADLKMA VDIIENAKTQRPGVCNACESIVVHSSIADKAVPLIYERLHQKQVEIRGDERAVAIEAGIV PADEEDWGTEYLDAILSLKTVDTIEEAIEHINRYNTGHSEAIITKDYDNALKFQNEIDAA AVYVNASTRFTDGHEFGFGAEIGISTQKLHARGPMGLEALTTVKYIISGNGQTRP >gi|224461045|gb|GG657759.1| GENE 36 35240 - 36280 1237 346 aa, chain + ## HITS:1 COG:Cj0224 KEGG:ns NR:ns ## COG: Cj0224 COG0002 # Protein_GI_number: 15791596 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Campylobacter jejuni # 2 339 3 336 342 403 56.0 1e-112 MIKVGIIGATGYAGGELVRILAGHKDAQIVWYGSRSYIDREYADIYQNMFQIVEGSCLDD NMEALAEKADVIFTATPQGFCASMISGEMLGRTKVIDLSADFRIKDVPTYEKWYGIEHKS PQFVEEAVYGLCEVNREAVKSARLVANPGCYPTCSFLSVYPLAKEGMIDMSTLIIDAKSG TSGAGRGAKVDNLYCEVNENIKAYGVAGHRHTPEIEEQLGLAANEQVLLNFTPHLVPMNR GILVTAYASLKQNVTYEEVKAVYDKYYDGEKFVRVLKKDICPQTRWVEGSNYVDVNFKID ERTGRIIMMGAMDNLVKGAAGQAVQNMNLMFGLPEDEGLALVPLFP >gi|224461045|gb|GG657759.1| GENE 37 36301 - 36747 491 148 aa, chain + ## HITS:1 COG:Cj0225 KEGG:ns NR:ns ## COG: Cj0225 COG0456 # Protein_GI_number: 15791597 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Campylobacter jejuni # 1 145 2 146 148 183 56.0 9e-47 MVRIMTIEDYDGVYALWTKIRGFGLRSVDDSREGVERFLKRNPTTSVVAVEDGKVVGSIL CGHDGRRGCLYHVCVDEDYRRRGIGRAMVGMAMEALKKEEISKVSLIAFTKNDVGNAFWN TIGWTRRLDLNYYDFVLNEKNITAFIGQ >gi|224461045|gb|GG657759.1| GENE 38 36767 - 37990 1755 407 aa, chain + ## HITS:1 COG:TM1783 KEGG:ns NR:ns ## COG: TM1783 COG1364 # Protein_GI_number: 15644527 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Thermotoga maritima # 12 407 5 397 397 382 53.0 1e-106 MDIIKGGVTAAKGFEAAAAAAGIKYKDRTDMALVYSQAPCEAAGTFTQNVVKAAPVKWDQ KVVKSGSKVQAVIVNSGIANACTGAEGYGYCEDTAVAAAEALGISGDGVVIGSTGVIGKQ IPIEKLTAGIKVLAEKKNDSLENGTQAARAIMTTDTFEKELAVTLKVGGKTVTIGGMAKG SGMIHPNMCTMLAFITTDADITKEALQKALSGDVDDTYNMISVDGDTSTNDTVLLLANGL AGNPQIRYGSEDYKAFAEALHVVNEYLAKKIAGDGEGATALFEVKAVGCESTEQARLLAK SIVCSNLTKTAIAGHDANWGRILCAMGYSGAQFDPEKVDLFFESRAGKIQIIENGTAVDY SEAEATKILSEPEVTATADVKLGSSSATAWGCDLTHGYIEINADYRS >gi|224461045|gb|GG657759.1| GENE 39 38014 - 38913 1190 299 aa, chain + ## HITS:1 COG:Cj0226 KEGG:ns NR:ns ## COG: Cj0226 COG0548 # Protein_GI_number: 15791598 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Campylobacter jejuni # 5 287 3 280 281 338 62.0 7e-93 MNKGMQKYLDKAEVLIEALPYIQRFNRKIIVVKYGGSAMVDEDLKEQVIKDVTLLKLVGF KPIIVHGGGKEISRWVGKVGMEPEFVNGLRVTDEATMELAEMVLGKVNKSLVQLVESLGV RAIGISGKDGGLLTVDKKLADGEDIGFVGEIKKVNADILYDLLEKDFLPIICPVGLDDSF NTYNINADDAACAIARAMRAEKLAFLTDIEGVYKDPHDPETLISELKVSEARNLMNEGYI GGGMLPKLHNCIDAIEHGVSRVHILDGRIPHCLLLEIFTNRGIGTAILNDSEERYFYGE >gi|224461045|gb|GG657759.1| GENE 40 38919 - 40097 1391 392 aa, chain + ## HITS:1 COG:Cj0227 KEGG:ns NR:ns ## COG: Cj0227 COG4992 # Protein_GI_number: 15791599 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Campylobacter jejuni # 11 392 9 392 395 412 52.0 1e-115 MKNQYIADTDTNLVHTYNRFPVVLERGEGVYLYDEKGKKYLDFAAGIAVSSLGYGNREFN DALKEQIDSLIHSSNLYYNTTCGKAAKALGRITEMDRVFFTNSGTEAIEGALKASRKYAY KKQTGRCEFIAMKDSFHGRSMGALSVTEHEAYRAPFEPLIPGVSFAEFNNLESVRALVTD KTCAVILEPLQGEGGINRADEAFMQGIRKLCDEEGILMICDEIQCGMGRTGTMFAWQGYG TKPDIIAMAKAIGGGVPVGAFAMTEEVARYSLEPGDHGTTYGGNPFVCAAVAKTVEIFER EKLTEHVKEMGRYLTAQLEALKETCDMILEVRGTGLIQGIRLKKPVGETVQAAIKEGLLV ISARSDVIRLVPPLVIEKEHIDEMIEKLKKVL >gi|224461045|gb|GG657759.1| GENE 41 40152 - 40583 621 143 aa, chain + ## HITS:1 COG:CAC3547 KEGG:ns NR:ns ## COG: CAC3547 COG3238 # Protein_GI_number: 15896783 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 14 143 14 142 143 84 38.0 5e-17 MIGFFIALLSGALMSVQGVFNTQVTKTTGMWVSNGWVQLSAFALCLVAWLIAGRDNVMTL AKVEPKYVLLGGVIGAGITWTVIKSMEQLGPAKAALLIVISQLIIAYVIELFGLFGVDKQ PLEWRRVIGMAIALIGVAIFQWK >gi|224461045|gb|GG657759.1| GENE 42 40649 - 41278 544 209 aa, chain + ## HITS:1 COG:BS_comEA KEGG:ns NR:ns ## COG: BS_comEA COG1555 # Protein_GI_number: 16079613 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus subtilis # 49 209 45 204 205 105 38.0 5e-23 MLDRSRKIGCLMCMLLVLALPGCRGEGAEEVRELDNAQSAAEEHGESAEEETLETEGKDT EGSGRQQEMYVHVCGQVHQPGVYRLPADSRVFEAVEAAGGMKEEADSAYLNQAEILSDGQ QLYIPALGEDISRAETAGVHPDEKDDGKININTAAKEELMTLNGIGEARADSIIKYREEH GGFRSIEELKEVEGIKDGIFNKVKDQVKV >gi|224461045|gb|GG657759.1| GENE 43 41302 - 41991 1005 229 aa, chain + ## HITS:1 COG:TM1655 KEGG:ns NR:ns ## COG: TM1655 COG0745 # Protein_GI_number: 15644403 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Thermotoga maritima # 3 228 12 241 247 216 51.0 2e-56 MSKRVLVVDDEKLIVKGIRFSLEQDGMDVDCAYDGEEALKLSRENAYDMILLDVMLPKYD GFQVCQQIREFSDVPVVMLTAKGDDMDKILGLEYGADDYITKPFNILEVKARIKAIMRRT SKRDSKTVNDKVIIKREMKIDCESRRVFIEEKEINLTAKEFDLLELLAMNPNKVYSRENL LNIVWGYEYPGDARTVDVHIRRLREKIEKNPSDPKYVYTKWGVGYYFRG >gi|224461045|gb|GG657759.1| GENE 44 42080 - 43414 1412 444 aa, chain + ## HITS:1 COG:lin2643 KEGG:ns NR:ns ## COG: lin2643 COG0642 # Protein_GI_number: 16801705 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 211 439 358 588 591 151 37.0 2e-36 MKAVILNSYEKRAVEVRTADIQNQCTILCNQLSGIDYLNGITSEVIRTELTQLTNIYNGR VMVIDSDYEIEEDTYNLDKGKTIISEDVIKCFQGKSTSHYDAKNRYIEVTAPITEAESDA VKGVMLVSVSTDSIADSMAVLEGNANVVAIIIIVTMTVLAFFAGVVMVKPFKRITDSIGA VTEGYDDNYLHENAYTETVLLSEAFNKMLGRMKVLDDSRQEFVSNVSHELKTPLTSMKVL ADSLLSQEEVPVELYQEFMGDLSEEIERENKIINDLLSLVKMDKTATTLNIKSENINELV EKILKRLRPIAANRNVEVVYESFRPVSAEVDEMKLSLALSNLVENAVKYNHDGGWVHVSL NADHKYFYVEVADSGIGIPEDAVEHIFERFYRVDKSHSREIGGTGLGLSIARNAIVMHRG AVKVYSQEGEGTTFTIRIPLTYVS >gi|224461045|gb|GG657759.1| GENE 45 43431 - 44357 826 308 aa, chain + ## HITS:1 COG:no KEGG:Closa_0837 NR:ns ## KEGG: Closa_0837 # Name: not_defined # Def: Lipoprotein LpqB, GerMN domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 34 301 40 313 330 194 38.0 3e-48 MKKKYVRCLCILSAAILLSGCQRGGKPGTTGTCMYYVNAEGTGLGKEAYDIKGDSAEEEI KSVLKDMYKEPEDDDYRSAFPGEIKVDDWKLEKGRLNLYFNESYKDMDAASEILLRAAVV QTLVQIAGVDYVNFYAGGEPLTDNEGDEIGYMHAEDFVQNTGSSLHSYQLANLHLYYINK KGGRLGEEEVSVRYNSNMSIEKLVVEQIIKGPSMQEHQPSVPPETKLLGISVKDGICYVN FDDGFMNAVYGVSPELTVYSLVNSIVEAGDANEVQISVNGETDVKYQGVIDLSKPLSRNL ELEEGGVK >gi|224461045|gb|GG657759.1| GENE 46 44390 - 46618 1712 742 aa, chain + ## HITS:1 COG:BS_comEC_2 KEGG:ns NR:ns ## COG: BS_comEC_2 COG2333 # Protein_GI_number: 16079611 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus subtilis # 436 725 1 284 307 132 27.0 2e-30 MFSVVLTAAVCLGGDRFVKERKITPLMREARSGDSLSITGQVYAIEEKSEYQILYLKNNT VKFQRQMLEESKFIVYDTSKQKVKAGNKAAAEGKVKFFEEPRNPGNFNEKQYYEKQGIHA CMWADSMKVTDSRVWKVRDGLFSFRRKWKAVLYEFMGEKQGALLSGIMLGDKSDIDPEVK ELYQINGIGHILAISGLHLTFIGFGLYRAVRRLSGSCTAGGICGILFLAVYILMTGVSVS AVRAAVMFLFRAGAEMAGRHYDAPTALSAAAVTVLVWRPLHLYDGGFWLSFGAVFGAAVI LPLFKKLPVQGLWANVSIQISILPVLLYYFYEFPLYSLFLNLLVVPLMSVLLFLGLAGSA AGLIAELPGEAVFTVCRMILKLYEWICRTAAAFPAARIITGKPPLAGVVCYYILLAFVLL MWSRRGQRQNGVKREKYIAKYIIISGITWVLAFLILLLPAKIGRGGMLEITMLDVGQGDG IYMKSPSGTTYFFDGGSSDVRQAGKYRIESFLAYKGTGTLDYVFISHGDSDHMNGIREMI ERGPLGISVRHLVLPRKEVWDDSLASLARLAGEKGTEVLIMKPGQSIRDGRLSLLCMHPG SRYGNEPGNAASMCIWARYAGFDMLFTGDVEGAGEAELTGFLRETKAEREKEGFDGVLEI LKVAHHGSKNSTAEEFLTETDPVYGFISAGRNNRYGHPHEETVERLKERGCRLFCTQTDG AVTVRTDGVQMYLSVFVSSADK >gi|224461045|gb|GG657759.1| GENE 47 46694 - 47707 1252 337 aa, chain + ## HITS:1 COG:BMEII0377 KEGG:ns NR:ns ## COG: BMEII0377 COG1304 # Protein_GI_number: 17988722 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Brucella melitensis # 184 336 228 377 382 118 41.0 2e-26 MTYEEVLANARTCMGEHCKACPVCNGKACTNKVPGPGAKGSGTVAVRNYEKWQELCVNMD TICENRPVDMTFEVFGKTFKYPVFAAPIGAMKLHYGDKYDDLEYNDILVSACADAGIAAF TGDGTNPDVMKAAAKAIGRKEGRGIPTIKPWDINTLKEKFALVKEAGPFAAAMDIDAAGL PFLKNLTPPAGSKTVEELKEIVAEAGVPFVIKGVMTVKGALKAKEAGAAAIVVSNHGGRV LDQCPATAEVLEEIAEAAGSDMKVFVDGGIRSGVDIFKALALGADAVLIGRPYVTAVYGG GAEGVAAYTSRLAAELSDTMAMCGAHSLDEITRDMVR >gi|224461045|gb|GG657759.1| GENE 48 47714 - 48694 907 326 aa, chain + ## HITS:1 COG:BH1337 KEGG:ns NR:ns ## COG: BH1337 COG1466 # Protein_GI_number: 15613900 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Bacillus halodurans # 4 321 6 333 342 147 28.0 2e-35 MKSLNEDIRTGQFKQVYLLYGEEAYLKKQYKDKLTRAMLPDGDTVNYAYYEGKGIHITEL IDLAETMPFFAERRLIVVENSGLFKNAAPELADYIRSMPGTACFLFVESETDKRGKMFKA VKDKGRVVEMGRQDEKTLIMWVGGNVKREGKQIKESTVRYLISKTGTDMENLDRELEKLF CYAIDRSEITPADIDAVCTTQITNKIFDMIEAVAAKHQKKALDYYYDLLALKEPPMRILY LLSRQFKLLYEVKDLLGRGFDKAQIAKTAGLHPFVAGKYISQSRTFAVHELKRIMEDAAD TEELVKTGRLNDVMSVELFIVKYSAA >gi|224461045|gb|GG657759.1| GENE 49 48785 - 50599 2257 604 aa, chain + ## HITS:1 COG:CAC1278 KEGG:ns NR:ns ## COG: CAC1278 COG0481 # Protein_GI_number: 15894560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Clostridium acetobutylicum # 1 602 1 602 602 864 70.0 0 MAEVEQSKIRNFCIIAHIDHGKSTLADRIIEKTGMLTSREMQSQVLDNMELERERGITIK AQAVRIVYQADDGEEYIFNLIDTPGHVDFNYEVSRSLAACDGAILVVDAAQGVEAQTLAN VYLALDHDLDVMPVINKVDLPSADPDRVIEEIEDVIGIEAEDAPQISAKTGFNVEKVLEQ IVEKIPAPGGDPKAPLQALIFDSVYDSYKGVIVFCRIKEGTVRKGTKIKMMATGASAEVV EIGYFGAGQFIPCEELSAGMVGYITASLKNVKDTRVGDTITDAEHPCSEPLPGYKKVNPM VYCGMYPADGAKYPDLRDALEKLQLNDASLQFEPETSIALGFGFRCGFLGLLHLEIIQER LEREYNLDLVTTAPGVIYKVYKTNGDMIPLTNPSNLPDPSEIEYMEEPVVKAEIMVTSEF IGAIMDLCQERRGVYDGMEYIEETRAVLRYHLPLNEIIYDFFDALKSRSRGYASFDYEMA GYERSDLVKLDILINKEEVDALSFIVHAETAYERGRRMCEKLKEEIPRQLFEIPIQAAVG SKIIARETVKAMRKDVLAKCYGGDISRKRKLLEKQKEGKKRMRQVGNVEIPQKAFMSVLK LDDK >gi|224461045|gb|GG657759.1| GENE 50 50600 - 51703 1047 367 aa, chain + ## HITS:1 COG:CAC1279 KEGG:ns NR:ns ## COG: CAC1279 COG0635 # Protein_GI_number: 15894561 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 1 363 1 374 374 284 44.0 2e-76 MRPLELYIHIPFCIKKCRYCDFQSAPSTKEERQEYVTGLCRKIRSYGELAEAYHVVTVFI GGGTPSVLEGAQILDIMDAVRGTFPIDAGAEITMEANPGTVTKEKFKTLRHAGINRLSIG LQSTDNSELKMLGRIHTYEDFLQTFDAARETGFDNINVDLMSAIPFQSVDSWDTTLIRTA GLGPEHISAYSLIIEEGTPFFERYGNGKRAGELPSEEEERLMYMHTRDILSEYGYHRYEI SNYARPGYECRHNLGYWNRAEYLGIGTGAASLMQEYRFTEGEEPVKLSVQEQMEEFMFLG LRKTEGISKKAFQKCFGRAVESVYGKVIIEMCRKGLLEMEGDAVRLTEKGTDVSNYVMSE FLLDKEA >gi|224461045|gb|GG657759.1| GENE 51 51704 - 52258 643 184 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 124 1 125 176 84 42.0 1e-16 MIYITLAYEFFKIGLFSIGGGMATLPFLMDLTSRYDWFSASELANMVAISESTPGPVGIN MATYAGYNAAGIPGALVATLSLVAPALIIIVIIARFLENFSENPTVKAVFYGIRPTVAAL IAYAVWELLKIALFSVSGGQIRIDYLSLFICAAVFGLLQIRKLAKLHPVIWIAAGAAAGI ILKL >gi|224461045|gb|GG657759.1| GENE 52 52255 - 52788 544 177 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 158 7 165 186 98 34.0 5e-21 MELYASFFRIGGLTFGGGLAMLPMLKREVVEQRKWCTEEEVLDMYAIGQCTPGVIAVNTA TYVGYRQAGFTGGVCATLGVISPSIIIICLIASILQNFIHLPAVVHALAGIRIVVCALMV NTVVTMARKGIVDKLGVALFAAAFLLACFTPVPTAAVIVLAAAAGVIAKKAEGRKLS >gi|224461045|gb|GG657759.1| GENE 53 52818 - 53330 601 170 aa, chain - ## HITS:1 COG:no KEGG:Closa_2357 NR:ns ## KEGG: Closa_2357 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 170 2 171 174 163 47.0 3e-39 MAEPFTLYKLIILYMLKKVDFPLTNSQISEFVLDEGYTTYFKLQQAISELIASGFVREES THSRTFYHLTAEGDETIRYFKNDISPAIQQDIDSFLKEKQYELKNEVAVKSDYYQNSNME YSVRCQVFEQGAPLIDLTLTVPTESEAVTISNNWTKKNPQIYAFIMENLL >gi|224461045|gb|GG657759.1| GENE 54 53333 - 54256 860 307 aa, chain - ## HITS:1 COG:CAC3238 KEGG:ns NR:ns ## COG: CAC3238 COG1242 # Protein_GI_number: 15896484 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 5 304 16 315 324 297 46.0 2e-80 MAVYWGGKRYHSLDFFLKNTYGEKLYKIALDGGMTCPNRDGTLGTRGCIFCSEGGSGDFA SDRKLTVTEQIECGKLRTAGKYAGSSYIAYFQAYTNTYAPLPYLRRIFTEAARHPDVRII SIATRPDCLDKDVISMLEDIRRIKPVWVELGLQTIHEETAAFIGRGYSLPVFEQAAAMLQ DAGIDVIVHTILALPGEDLSMMLDTLHYLNGAGIQGLKLQLLHVLRGTALAAYYEAHPFW IPSMEEYFYLLGRCIGSISPDIVLHRLTGDGPKQLLIAPKWSGNKRLVLNQMQSYLKKHD IWQGKEL >gi|224461045|gb|GG657759.1| GENE 55 54488 - 55195 763 235 aa, chain + ## HITS:1 COG:CAC2889 KEGG:ns NR:ns ## COG: CAC2889 COG1158 # Protein_GI_number: 15896143 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Clostridium acetobutylicum # 7 232 10 272 483 185 42.0 7e-47 MMKAKYESLPLATLKDLAKARGLKGISTMKKAELIELMLEEDEKEKKAERENVKEMSANT GDKEVHDIDKLDSGVTARGILEVLPDGYGFIRSDNYLPGDNDVYVSPSQIRKFNLKTGDI LEGNTRIKTQQEKFSALLYLSRINGMEPMRALRRSNFEDMTPIFPDERLRLECGKTSTAM RIVDLLSPIGKGQRGMIVSPPKAGKTTLLKQVALSVRQNNPEIHLLILLIDELAS >gi|224461045|gb|GG657759.1| GENE 56 55393 - 58269 3336 958 aa, chain + ## HITS:1 COG:BH2487 KEGG:ns NR:ns ## COG: BH2487 COG1196 # Protein_GI_number: 15615050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Bacillus halodurans # 20 955 234 1183 1188 367 31.0 1e-101 MFLLETKRLSDQIQSIDGRLDTTRAELDEANSRYEDMKTEYESVEEQVDSIDASVEKAKS QLNETNMLKQQLENQIALLKEQIHSAHMNDEHYDQRAKTIDSEIAEREKQLTELVTEQES IQAELDEKGKLERLARAELIEVETRIATLTASVESNKKDIIELLNSRASTKAKIQRYDTM LEQIEVRKSQMNKQVIECESEAAKQEVHLETFQKELREISGQIIELTEESSTYEDKIKVV QDKLAGQNEQFRIGQTAYHREQSRLESLKNITERYDGYGNSIRKVMDNREKEKGLLGVVA DIIKVDKDYEIAVETALGGSIQNIVTSDEDTAKRMIQFLKQNKYGRATFLPLTAIKANGG IYRQEALKEPGVVGTADKLVTTGEKFKGLAEYLLGRTLVVDHIDHGIAIARKYRQSIRIV TLEGELINPGGSMTGGAFRNSSNLLSRRREIEEFEKTVRQLKREIDELEAASDALRQERT GYYDKLEELKSRLQKAYVIQNTAKMNVDQAEARIRTARNSASGLKREADELDSQITDIID NQESINVELDTSESLEKELTDKIEKEQKILEAEREEEGRKQKAAEEIHLSYAGLEQKYTF LLENTERIQEEIAKFQEELSELEASKGGTSREIEEKEEQIEDLKNTIINSKELFAEIQQE IERLKQEREELNRKHKVFLQKREELSRHMSELDKEIFRLESQKEGYEEASEKQMNYMWEE YEVTYNHALEIRDESLTDLARMKKQIQTLKGEIKGLGDVNVNAIEDYKILSERYEFLKNQ HDDLVEAEATLVQIIEELDEAMRKQFREQFDLISGEFDHVFKELFGGGKGTLELMEDEDI LEAGIRIIAQPPGKKLQNMMQLSGGEKALTAIALLFAIQNLKPSPFCLLDEIEAALDDSN VVRFAKYLHKLTKNTQFIVITHRRGTMTAADRLYGITMQEKGVSTMVSVSLLEEQLDK >gi|224461045|gb|GG657759.1| GENE 57 58296 - 59255 791 319 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 21 312 25 320 336 309 51 4e-82 MEEVKQESGEKQGFFRRLVSGLTKTRDNIISGMDNIFSGFSRIDEEFYEELEEVLIMGDL GVQATDNILEDLKEKVRARHIKEPSECRQLLIDSIKEQMDIGETAYEFEDRTSVVMVIGV NGVGKTTTIGKLAGKLRSRHKKVVLAAADTFRAAAGEQLKEWADRAQAELIGGQEGSDPA SVVYDAVAAAKARHADVLLCDTAGRLHNKKNLMEELKKMNRIIDREFPDAYRETLVVLDA TTGQNALMQAKEFNEVADITGIILTKMDGTAKGGIAVAIQAELGIPVKYIGVGETIEDLQ KFDADEFVNALFTTEKPEE >gi|224461045|gb|GG657759.1| GENE 58 59282 - 60496 1498 404 aa, chain + ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 1 403 1 403 404 394 55.0 1e-109 MMTLEKFEQASELVKKVTNPTKLVYSEYLSQQSGGKIYLKPENMQYTGAYKVRGAYYKIS TLSEEERGKGLITASAGNHAQGVAYAAQKYGCKATIVMPTVTPLIKVNRTKSYGAEVILH GDVYDDACDYALKLAEENGYTFVHPFDDLDVATGQGSIAMEIVQELPTVDYILAPIGGGG LISGVSTLAKMLNPKIQIIGVEPAQAASMTAALANEGPVTLPSANTIADGTAVKRVGEKI FPYVQENVDRIVTVEDDELIGAFLDLVENHKMVVENSGLLTVAALKQLDLKGKKAVAILS GGNMDVITMSSIVQHGLIQRDRIFSVSVLLPDKPGELVRVAATIADAQGNVIKLEHNQFV STNRNAAVELRITMEAFGTEHKHEIMQALEDEGFRPREIGAKLY >gi|224461045|gb|GG657759.1| GENE 59 60515 - 60979 579 154 aa, chain + ## HITS:1 COG:CAC1208 KEGG:ns NR:ns ## COG: CAC1208 COG4728 # Protein_GI_number: 15894491 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 7 88 78 159 173 78 46.0 5e-15 MEHHIPQKGERYRHFKGNLYEVLAVASHSETAQQLVIYEGLYREHPVYARPLEQFMGRVD AEKYPDRGQEYRFELEEESEAGNGQSLIMEFLDLDTKEEKVEFLQRERMNITEDFLCAAA MSLDYVESKEDPDLRYEDLMHYLKTLIRYENRRR >gi|224461045|gb|GG657759.1| GENE 60 61099 - 61524 470 141 aa, chain + ## HITS:1 COG:no KEGG:Closa_2944 NR:ns ## KEGG: Closa_2944 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 15 111 12 106 130 84 40.0 2e-15 MKNREKDQAGTDGPQMAELCAKVKEYVENEDWESCMELIPKYMEQYPDSAVPHNLMGIVL ESQGKHPEAMRHFRAAWSLDSTFVPANRNMDAYAVYDRTQKVEPAYTMEDCMPKTEPGAL QKTSFFLRSLLANHSKKAGAA >gi|224461045|gb|GG657759.1| GENE 61 61607 - 64273 2372 888 aa, chain + ## HITS:1 COG:pli0050 KEGG:ns NR:ns ## COG: pli0050 COG2205 # Protein_GI_number: 18450332 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Listeria innocua # 19 888 16 886 888 831 48.0 0 MDLEENKIIPDARAKRHGRGKLKIFFGYAAGTGKTYAMLQSAQKAKEAGIDVVAGYIEPH TRPETMALAQGLEMLPAKELPRRNMILREFDLEAALERRPELILIDELAHANAAGCRHEK RYQDIRELLKAGINVHTTVNVQHLESLNDLIAGITGVIVKERIPDSVFDGADQAELVDIE PEELLERMKEGKIYGKSGADRAMGNFFTEENLVSLREIALRRMADRVNRARDTMTPLRNG TAEHILICLSPSPSNGTVIRQAARMAAAFHGDFTALYVETPEASDRSRADIRQMNENMRL AEQLGAKIVTSYGSDIVEEIAAYAKVARVTKIVLGRTYTRRRLLFIKDSFSEQLSRLAPT LEIFLIPDTYDKSYRAEKRRKKPADVQSSTAKDAVVCVLSLICSTAIAFLLNRFFGFSAA NIVMVYMLSVLMSAVFTSRQVWGIIASVMSILIFNFFFTEPYRTLQVNDPGYLITFCVMF ITAVISSALTKKVKNYARQNAKKAYRTEILLETSRKLQDAGTLENIAKKTAEQLNMLLER NVYFYLGRPEKKNRPVVCKADETAPDMLEDDELAVAQWTYQNNKHAGYSTQTLPGARCLC MAVRSADKVFAVVAIDMQLREIPAFEEGIMGAILNECAFALEKEELIIERKEADVKLQKE QLRANLLRSISHDLRTPLTSISGNAETLMGNDSELSRQQRNAIYKDIYDDSMWLVNLVEN LLSVTRIENGSMELNIQGEILEDVITEALRHVNRRGREQVITVECDELLMARMDVKLMLQ VIINLTDNAVKYTPPHSEIMIKARRHGDKAVVTVADNGPGIKEDEKDRLFQMFYTSSNTV SDGRRGMGLGLTLCQAVVGAHGSEIKVYDNVPHGAVFRFELEVEEVIL >gi|224461045|gb|GG657759.1| GENE 62 64270 - 64980 825 236 aa, chain + ## HITS:1 COG:pli0051 KEGG:ns NR:ns ## COG: pli0051 COG0745 # Protein_GI_number: 18450333 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Listeria innocua # 4 236 2 232 240 254 55.0 8e-68 MTANGKPYVLVVEDDAPVRNLITTTLESQNYKYMTSANGSQAVMSAASGNPDIILMDLGL PDMDGVDVIKKIRTWSVAPIIVISARSDDKDKVDALDAGADDYLTKPFSVEELLARLRST LRRIQYLTQKGEEEPSVFHNGSLTIDYGAGTVYVGEQEIHLMPLEYSLLCLLAQNVGKVL TYQFILDKVWVNAIESDMSSLRVYMASLRKKIEKNSSQPQCIQTHIGIGYRMVRLN >gi|224461045|gb|GG657759.1| GENE 63 65181 - 66572 1281 463 aa, chain + ## HITS:1 COG:CAC0970 KEGG:ns NR:ns ## COG: CAC0970 COG0119 # Protein_GI_number: 15894257 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Clostridium acetobutylicum # 24 447 6 428 448 567 59.0 1e-161 MEDRKVYLDKHSNLLQLEEHMYPLVDVEKPNVFRNLFHYDEIPKIAFNDRIVPHSMPDEI WITDTTFRDGQQSRAPYSTEQIVTMYDYFHRLSGPKGKIRQCEFFLYSGKDRDAVYKCLE RGYEFPEVTSWIRASRKDFELVKEIGLKETGILVSCSDYHIFYKLKMTRREAMEHYLSVI RECLETGIRPRCHLEDITRSDIYGFVIPFCLELMHLMEEYKIPIKIRVCDTMGYGVNYPG AVIPRSVPGIIYGLRVHAGVPSSLIEFHGHNDFYKAVSNSTTAWLYGASGVNCSLFGIGE RTGNTPLEAMVFEYAQIRGTLDGMDTTAITELAEYYEKEIGYRVPSRTPFVGRNFNVTRA GIHADGLLKNEEIYNIFDTEKFLNRPALVAVSNTSGLAGIAHWINTYYRLRKDEQVDKSS ELVAMVKAWVDREYEDGRVTVLTDEELTGVIETACKQLGICLK >gi|224461045|gb|GG657759.1| GENE 64 66596 - 67249 668 217 aa, chain + ## HITS:1 COG:AGl2035 KEGG:ns NR:ns ## COG: AGl2035 COG1802 # Protein_GI_number: 15891135 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 212 18 222 238 95 30.0 6e-20 MEEYQDRSLRGRVFQKLREDILSGVYKEHDELREITLGETLGVSRTPVREALRQLELEGL VTIVPNKGAYVTGITQKDVHDIYKIRSMLEGLCAHWATEHITDRQIEELEEIILLSEFHL GKKGSEQAEQVSELDGKFHKVLYEASDSRILEHVLSDFHKYVQMARTMSVGAKERAEKSI EEHRAILEAIKLKDADRAERLANAHIMKVMENLHIEE >gi|224461045|gb|GG657759.1| GENE 65 67273 - 68472 1249 399 aa, chain + ## HITS:1 COG:TM1148 KEGG:ns NR:ns ## COG: TM1148 COG0538 # Protein_GI_number: 15643905 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Thermotoga maritima # 1 398 1 395 399 483 59.0 1e-136 MAKIKMATPIVEMDGDEMTRILWQMIKENLLEPFIELNTEYYDLGLEHRNETDDQVTVDS ANATKKYKVAVKCATITPNAARMEEYDLKEMWKSPNGTIRAILDGTVFRAPIVVKGIEPC VKNWKKPITIARHAYGDVYKGTEMKIPGEGKVELVYTAKDGSKSRELVHDFTGAGIVQGM HNVNESIESFARSCFNYALDIGQDLWFATKDTISKKYDHTFKDIFQEIFEEEYENKFKEA GITYFYTLIDDAVARVMKSEGGYIWACKNYDGDVMSDMISSAFGSLAMMTSVLVSPEGYY EYEAAHGTVQRHYYKHLKGEETSTNSVATIFAWSGALRKRGELDGSRELMEFADRLEKAT IDTIEEGKMTKDLALITTVEKPVVLNSEEFIKAIAEKLA >gi|224461045|gb|GG657759.1| GENE 66 68634 - 69326 693 230 aa, chain + ## HITS:1 COG:no KEGG:BP951000_2096 NR:ns ## KEGG: BP951000_2096 # Name: not_defined # Def: hypothetical protein # Organism: B.pilosicoli # Pathway: not_defined # 1 229 1 229 231 245 48.0 1e-63 MKILMINGTMQKGSTYTIGKMFIERTASEEDSVKELFLPKDMPEFCRGCAVCIRQDEKKC PDYLIYMRRITEMIDEADLLVFTSPVLVYHVSGQMKALLDHYGYRWMVHRPDASMFRKQA VCITTAAGAGMKKALRDMTDSLRYWGVARIYTYGVAVGGGIDDTNREKIETAVHNLAEKI EHDASKVTPGLRVRILFYIMRFMQKRTGTTETDKNYWEEKGWLGRNRPWK >gi|224461045|gb|GG657759.1| GENE 67 69381 - 70241 413 286 aa, chain - ## HITS:1 COG:BH3634_1 KEGG:ns NR:ns ## COG: BH3634_1 COG2207 # Protein_GI_number: 15616196 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 5 115 4 112 132 98 46.0 2e-20 MQINIISVKAAIDYIESNLAGKLDLEIVANAVHYSKYHLHRVFIDTVGLTIHDYVQRRRL TEAAKLLVFSDKPIIEIALTAGYKSQQSFTTVFKHMYKKTPNQYREAEEFYPLQLTYILN DNPTKTSTDIDWQADIVYAVENDIPAWMDLLCLVVDGFPYLNEDEYLERLKQSVQKKQAL IMKDKNIIIGAMIFNNAAGSIDFLGIHPQYRKNDIAKAFLQKVRGELLTDVPISITTFRE GDKADTGYRKVFRQLGFSEAELLIEFGYPTQKFILQKQNHLSLPGL >gi|224461045|gb|GG657759.1| GENE 68 70395 - 72314 1977 639 aa, chain - ## HITS:1 COG:CAC2714 KEGG:ns NR:ns ## COG: CAC2714 COG0488 # Protein_GI_number: 15895971 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 638 2 638 643 529 45.0 1e-150 MILACHGISKAFGEDVIVRDASFHIEDYEKAALVGPNGAGKSTILKMMVGELPADAGEVI LTKGKTLGYLAQHQEMTGGNTIYEEVRTAKADIIETERQIRTIELELKHLEGDALKARLD TYNRLTAAFERANGYAYESEITGVLKGLGFDESDFAKSVDTLSGGQKTRVSLGKLLLTKP DILLLDEPTNHLDLNSIAWLETYLLNYQGAVLIVSHDRYFLNRVVTKVLEIELGTLSVYM GNYSQYAEKKKMIRDAKLKEYMNQQQEIKHQEAVIEKLRSFNREKSVKRAESREKMLSKL QPVEKPKETNTEIHLSLEPSCISGNDVLSVEHLGKSFPSQRLFSDVSFEIKRGEHVAVIG DNGTGKTTLLKILNNVVPADSGTFTLGTNVEIGYYDQEHHVLHMDKTIFEEISDDYPHLT NTQIRNMLAAFLFTGDDVFKMIGDLSGGERGRVSLAKLMLSEANFLILDEPTNHLDITSK EILEKALNDYTGTVLYVSHDRYFINETATRILDLVNQTFVNYIGNYDYYLEKKEELTAVY AGSGQSEDLSRAQEAVSESKLSWQEQKEAQAKERKRQNDLKKTEERITALEERDTEIDIL MTQEEVYTNSVQCQELAAEKAAIHTELEELYIRWEELAD >gi|224461045|gb|GG657759.1| GENE 69 72468 - 73118 656 216 aa, chain + ## HITS:1 COG:CAC2713 KEGG:ns NR:ns ## COG: CAC2713 COG2344 # Protein_GI_number: 15895970 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Clostridium acetobutylicum # 2 202 3 203 214 228 56.0 4e-60 MEEREISQAVIRRLPRYYRYLGELLENGVERISSNDLSKRMKVTASQIRQDLNNFGGFGQ QGYGYNVKYLYTEIGKILGLEEDHNIVIIGAGNLGQALANYAAFEKRGFILKGIFDVNPR LNGVSIRGVPIRMMDELKDFVQNNNVEIAVLTIPKEKAIEVANMLVENGVRAIWNFAHTD LNLPDHIIVENVHLSESLMRLSYNISRYNDEHSGKK >gi|224461045|gb|GG657759.1| GENE 70 73240 - 74739 685 499 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225093729|ref|YP_002662469.1| ribosomal protein S15 [gamma proteobacterium HTCC5015] # 4 488 8 490 497 268 35 9e-70 MKYLLNASQMKRADEYTTGRLRIPSLELMERAAAGCVDHMEESGLDLTNVCVVCGTGNNG GDGFAAARMLTEKGHRVTAVLCGEEEHCTKETKEQIKRLRQTGAAITTEFREDSYSVVID ALFGVGLNREIEGKRRELIDAMNRSGGFKLAVDIPSGVCADSGAVMGTAFRADATVTFQE MKLGMELYPGKEYAGKTVTVNIGIDTSEIKKEKDAAFTYECGEYKSLLPVRRADSNKGTY GRVLVIAGSRGMSGAAYLNARAAYTAGAGLVQIYTSEDNRVILQTQLPEAIIRTYDFYDE VELLKLLNWADVVSVGSGIGTSDKSRKILRTVMENVEVPCVIDADGLNLIADHKKYLDRL RHENFIFTPHMKEMSRMTGKDIPQLRARRIEILREFAEEYSVTCVLKDARTVTMPAGGRP YVNLSGNASMAKAGSGDVLAGIIAGLLAQGLDLTDAAVLGTYLHGRAGELASRDKGSYSV MASDLIEYTGRAMKEEEDR >gi|224461045|gb|GG657759.1| GENE 71 74740 - 75906 1311 388 aa, chain + ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 7 386 8 385 386 298 40.0 9e-81 MKAYNRVCARIDLDAVEYNIEMMKNNVRDGAKMLGVVKTDGYGHGAVQIAKMLSPKDYMW GFAVATLDEAVVLRHGGIEKPILVLGCIFPDQREDMIKHDIRMTLYTEEMAREVSELAVK IGKQAYIHIKLDTGMSRLGFLIGEEAADIIERISKMPNLVMEGMYTHFAKADEIDKSFTG KQIRNYVWMKETLEKRGVAFTYYHCSNSAGIIDVPEANMDLVRAGISTYGLYPSEEVHKE NVPLKPAMELISHVAHVKWVDAGTPVSYGGTYITDRRTKIATIPVGYGDGYPRSLSNKGY VLIHGKKAPILGRVCMDQFMVDATEIDDVKYADKVTLVGNDGGEKLPVEVLSGLSGRFNY EFVCDLGKRIPREFIRHGEIVEQMDYFV >gi|224461045|gb|GG657759.1| GENE 72 75994 - 76341 318 115 aa, chain + ## HITS:1 COG:BS_ydcE KEGG:ns NR:ns ## COG: BS_ydcE COG2337 # Protein_GI_number: 16077533 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Bacillus subtilis # 1 113 1 113 116 161 71.0 3e-40 MQVRRGDIYYADLSPVVGSEQGGIRPVLIIQNDIGNKHSPTVICAAITSKMNKAKLPTHV EIDAKKYQIVKNSVILLEQVRTIDKQRLKDLVCHLDKQIMNKVDEALKISFELHT >gi|224461045|gb|GG657759.1| GENE 73 76366 - 77166 949 266 aa, chain + ## HITS:1 COG:TM0845 KEGG:ns NR:ns ## COG: TM0845 COG1253 # Protein_GI_number: 15643608 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Thermotoga maritima # 32 265 201 433 455 155 38.0 8e-38 MEEGSLFQRMKQIFQIKEDVEDEGVWKEAAELIRNIFRYMDKDAKDIMTHRKNIVAIDGN EKLADALRFMLDESYSRFPIYEEGIDEIIGTIHLREAMTCYFNEDLRQMPVKQLDDYIRP VAFIPETKSIDTLFKEMQAEKNHIAIVLDEYGQTSGLVAMEDILEEIVGNILDEYDEEEE LIEILPDGRCIASGMTDLEDLEDMLPMTFEKEEYETLNGFLVDQLDRIPSEEETCIVEYD GYRFTVLSVDNNTIERVKIEKLNEEC >gi|224461045|gb|GG657759.1| GENE 74 77223 - 77876 886 217 aa, chain + ## HITS:1 COG:CAC2295 KEGG:ns NR:ns ## COG: CAC2295 COG0217 # Protein_GI_number: 15895562 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 213 1 211 246 211 55.0 8e-55 MSGHSKFANIKHKKEKNDAAKGKIFTKIGKELAVAVKEGGSADPANNSRLRDVIAKAKAN NMPNDTIDRNIKKADGDANAANYEYITYEGYGPNGTAIIVEALTDNRNRTATNVKNAFTK GSGNVGTPGCVSFMFDKKGQIIVSKEEYEGDADDLMMQALDAGAEDFAEEEDSYEIVTTP EDFSTVRLALEEAGIPMAAAEVTMIPQTYVELTDPKD >gi|224461045|gb|GG657759.1| GENE 75 78086 - 78850 896 254 aa, chain + ## HITS:1 COG:no KEGG:Hbal_0324 NR:ns ## KEGG: Hbal_0324 # Name: not_defined # Def: hypothetical protein # Organism: H.baltica # Pathway: not_defined # 145 249 247 351 354 79 39.0 1e-13 MEQTKQELIQLFEEMLTQIKHFKRKTYEGIFKDCYDKYKGTVAAVARLCEEAPEDEREAV AAELALVIPDYAFEKMQALSKGKKERFSVDYNMNMAVYVVPMLTYTHNEYCEKIASKMVE AWNEKGVTTLTLGQSSYDDIAGGFKKGFCFITTAVCEQQDKPDDCYELRTLRAYRDDYMM STEDGKALVEEYYDIAPGIVQIINMQKDAEHIYEALYRDCLAPCISCIEAGEKERCKELY TRMVRGLQKKYLYS >gi|224461045|gb|GG657759.1| GENE 76 78861 - 80141 1346 426 aa, chain + ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 8 423 5 418 422 528 59.0 1e-150 MSNYKMETKCIQSGYQPGNGEPRILPIYQSTTFKYDNSEQMGRLFDLEESGYFYTRLQNP TNDAVAAKICDMEGGVAAMLTSSGQAASFYAIMNIVEAGDHIVCTSALYGGTYNLYAHTI RKMGVEATFVDPDCTEEELDGAFRDNTKAVFGETIANPALVVLDLEKFAKAAHTHGVPFI VDNTFATPVNCRPFEWGADIVTHSTTKYMDGHATSVGGAIVDSGNFDWEAHAGKFPGLTT PDETYHGIVYTERFGKGAYITKATAQLMRDLGSIQAPQNAFLLNIGLETLALRMERHCQN ALAAAMYLKNHEKVAWVSCPALPGDKYYDLAQKYMPDGTCGVITFGLKKGRDAAVRMMDS LKMIAIVTHVADARSCVLHPASHTHRQMNEQELLEAGVQPDLIRFSVGIENIDDITADLE QALMQV >gi|224461045|gb|GG657759.1| GENE 77 80194 - 80892 890 232 aa, chain + ## HITS:1 COG:BS_ymfB KEGG:ns NR:ns ## COG: BS_ymfB COG0740 # Protein_GI_number: 16078742 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Bacillus subtilis # 5 230 10 238 241 215 48.0 6e-56 MADQEKEEQKNNEIKEMGSINLDENKSSHRIKLLTIIGEIEGHEAVSGNTKATKYEHLLP MLAEVEDSEEIEGMLILLNTLGGDVEAGLSIAEMIASLSKPTVSLVLGGSHSIGGPLAVS AQYSFIVPSGTMIIHPVRSSGMFIGVEQSLRNMLRTQDRITRFLSKHSNMSQERIEKLML NPTELVKDVGTLLEGEDAVKEGLIDEVGGMSQALHKLHEMIDGERQKKHKNM >gi|224461045|gb|GG657759.1| GENE 78 80958 - 83339 2620 793 aa, chain + ## HITS:1 COG:CAC1812 KEGG:ns NR:ns ## COG: CAC1812 COG1674 # Protein_GI_number: 15895088 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 7 787 21 765 765 562 42.0 1e-160 MAAKSKKRKSTRQTKKKNNEQSFVRDEIIIWSALAVSILILISNFGMGGLVGAAISSFLI DVFGWAAYVIPFVLFGFVAFIVSNKGNFSAYMKAAAGLVLLVLVCMLLHLIDGRGGDLGE VLAGALVPAIGTAGTYVVDIILIIICLVIITGKSALKGVKKHSDKAYDKAKKDAQRRREQ AEERKAERETRRDARREDKKRTAHHVEGVSFDTTIAKKSPELKELTAAPPDLSVQEKAEE PQFVINRGEMPRMAEVQEEQVPEAEEEPAIPVRSANAAGKGQDRAGIAAEAAGVAASVAA AEARPKKAYKYPPISLLTKGKKNSGESDAALRETAMKLQQTLQNFGVNVTVTNVSCGPAV TRYELQPEMGVKVSKIVGLADDIKLNLAAADIRIEAPIPGKAAVGIEVPNKENAAVMLRD LLETAEFKNSASKLSFAAGKDIGGKAVVTDIARMPHLLVAGATGSGKSVCINTLIMSILY KAAPDEVKLIMVDPKVVELSVYNGIPHLMIPVVTDPKKAAGALNWAVAEMERRYKAFAEY NVRDIKGYNDKVPEMPVIEGRKPEKMPQIVIIVDELADLMMVAPGEVEEAICRLAQLARA AGIHLVIATQRPSVNVITGLIKANMPSRIAFSVSSGVDSRTIIDMNGAEKLLGKGDMLFY PSGYQKPARVQGAFVSDKEVQSVVEYLKDHNGDATYSEEIENHVNTSAAGGNAGPGSADG EERDLYFADAGRLIIEKEKASIGMLQRTFKIGFNRAARIMDQLCEAGVVGGEEGTKPRKI LMTAEEFERYMEE >gi|224461045|gb|GG657759.1| GENE 79 83375 - 85045 1788 556 aa, chain + ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 556 1 556 556 735 65.0 0 MKTDIQIAQEAEMAHIKEVAAQVGIEEDELEFYGKYKAKLSDDVWEKIKDRPDGKLVLVT AINPTPAGEGKTTTTVGLGEAMARLDKKAIIALREPSLGPCFGIKGGAAGGGYAQVVPME DLNLHFTGDFHAITSANNLLAALLDNHIQQGNALQIDPRQVVWKRCLDMNDRNLRNIVVG LGSKMDGMVREDHFVITVASEIMAILCLADDIHDLKKRLGRIIVAYDFAGEPVTADDLEA TGAMTALLKDAIKPNLIQTLEHTPALVHGGPFANIAHGCNSVRATKMALKLSDITITEAG FGADLGAEKFLDIKCRKAGFKPDAVVLVATVRALKYNGGVAKNDLSKENIEALKRGIVNL EKHIENIQKYDIPVVVTLNSFITDTDAENEFIRKFCEQKGCEFALSEVWEKGGEGGVALA EKVLDTLENKESNFHTLYEDELSLEEKIETISREIYGARGVVYEPAAQKQLAKIASMGFG NLPVCMAKNQYSLSDDAKKLGRPTDFDIHIREVYVSAGAGFVVALTGAVMTMPGLPKVPA ANGIDVSESGSITGLF >gi|224461045|gb|GG657759.1| GENE 80 85059 - 85898 826 279 aa, chain + ## HITS:1 COG:BH2784 KEGG:ns NR:ns ## COG: BH2784 COG0190 # Protein_GI_number: 15615347 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus halodurans # 2 279 3 279 279 318 59.0 5e-87 MAMLIDGKAISAQIKEELKKETALLAEEGRHVCLAVVQVGGDPASSIYVGNKKKACDQVG IESLSYELEEQTSEAELLSLIDRLNRDDKVNGILVQLPLPGHINEDAVIRAIHPDKDVDG FHPESVGRLCIGEKGFVPCTPAGIIQMLKRSGIEIEGKECVVVGRSNIVGKPMAMLLLRE NGTVTVAHSRTKQLREVTKRADILVAAVGKPKFITAEYIKEGAVVVDVGIHRNENNKLCG DVDFDGVKEKAAAITPVPGGVGPMTIAMLMSNCVEAARK >gi|224461045|gb|GG657759.1| GENE 81 85914 - 87203 1109 429 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1956 NR:ns ## KEGG: EUBREC_1956 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 411 1 414 433 167 29.0 6e-40 MKCRYCGHEIPEGMLYCGECGKEVRIVPDYNPLDDMLTAQIKVSINEEDGALSGSDYDMF TGDIPARRRNTGTGRNTNARRNTNTGRNTGRSSVGRNTGRNTGRNTTGRMMSEKEQRRRQ MERRKALKRKKRRKVLIILAVLVVAAVAAGVVCYQNSYNGIVNKGYSAQKEKAYEKAETY FKKAISKKPEKAEAYTGLSKVYIAQDDLEKAEDVFLNAIDKQTKNADLYEACVSFYMDTD QKMEIPVLLEDVDDSVAERLGGFIIDGPSFSLDDKETYEEVQELTLKSDEAAIYYTTDGS EPSTKSEKYKEPIQLGEGENIITAIAVNKEGVPSLPVKKTFTIELPVEDAPAVSPSTGQY DTAAQIEIKVPDGYEAYYTMDKSDPTTASTKYEGPIDMPQGETIFKAVLVNAKGRMSGIT TRNYMYEPE >gi|224461045|gb|GG657759.1| GENE 82 87402 - 88583 1317 393 aa, chain + ## HITS:1 COG:YPO2180_2 KEGG:ns NR:ns ## COG: YPO2180_2 COG1454 # Protein_GI_number: 16122410 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Yersinia pestis # 6 390 6 416 441 320 43.0 2e-87 MSRFTLPRDVYHGKGCMEELKNLKGKKAILVVGGGSMKRQGFLDKAAGYLKEAGMEVELF EGVEPDPSVETVMKGAEAMRKFEPDWIVAMGGGSPIDAAKAMWAFYEYPETTFEDLCIPF NFPELRQKAKFAAIPSTSGTATEVTAFSVITNYETGVKYPLADFNITPDVAIVDPELVEA LPVKQVAYTGMDALTHAIEAYVSTLNCAFTDPLALQAIEMVLDHLPASYHGNMDAREQMH YAQCLAGMAFSNALLGIVHSMAHKTGAAFSTGHITHGCANAMYLPYVIKYNAKDATAASR YAEIARRMGLDGTSERSLINSLCKKIDAMNAEFDIPKTLKDFGIIENEFKEKIAKISELA VGDACTGSNPRSIDPAAMEKLFTCIYYGTEVDF >gi|224461045|gb|GG657759.1| GENE 83 88725 - 89612 874 295 aa, chain + ## HITS:1 COG:PAB1737 KEGG:ns NR:ns ## COG: PAB1737 COG0543 # Protein_GI_number: 14521153 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Pyrococcus abyssi # 1 277 1 270 278 266 51.0 3e-71 MYKILKAENPADKIYLMDVEAPRVARHCEPGQFVIVKMDEKGERIPLTICDYDREAGTIT IVFQTVGASTEKMAGLKAGDYFRDFTGPLGCPSEFIHEDIESLKNKKMLFVGGGVGAAPV YPQVKWLHEHGVDVDVIVGSKTKDMLILEDEMESVAGNYYPCTDDGTYGHAGMVTTKIEK LVEEGNKYDVCVAIGPMIMMKFVCLLTKKLGIPTIVSMNPIMVDGTGMCGACRLHVGEDI KFACVDGPEFDGHLVNFDEAMKRQQMYKTQEGRALLKIQEGDTHHGGCGNCGGDN >gi|224461045|gb|GG657759.1| GENE 84 89612 - 91000 1550 462 aa, chain + ## HITS:1 COG:MA3787 KEGG:ns NR:ns ## COG: MA3787 COG0493 # Protein_GI_number: 20092583 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 6 462 15 469 469 502 60.0 1e-142 MADVLKKVPVREQEAKVRAANFEEVCYGYNKEEAMEEAVRCLNCKNAKCIQGCPVAINIP GFISKVKEGDIEGAYKVIGESSALPAICGRVCPQESQCECKCIRGIKGEPVSIGKLERFV ADYALEHDIKPQKAEKMNGHKVAVIGSGPSGLTCAGDLAKLGYDVTVFEALHELGGVLVY GIPEFRLPKEKVVKKEIEKVKELGVKFETNVVIGKSTTIDQLMEEEEFEAVFIGSGAGLP MFMGIPGETANGVFSANEYLTRSNLMKAFDDNYDTPIAAGKKVAVVGGGNVAMDAARTAL RLGAEVHIVYRRSEAELPARVEEVHHAMEEGIIFNLLTNPKEILVDENGWVRGMRVIKME LGEPDASGRRRPVEIPGSEYEIELDTVIMSLGTSPNPLIASTTKGLETNRRKCIVAEEEN GQTSKACVYAGGDAVTGAATVILAMGAGKAGAKGIHELLSSK >gi|224461045|gb|GG657759.1| GENE 85 91130 - 91927 947 265 aa, chain + ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 22 265 25 269 269 223 54.0 3e-58 MKEGFIYMTIFWGLMIPFIGTTAGAACVLFMRRELKPLIQKALLGFAAGVMVAASVWSLL IPAMDMSEDMGKFAFMPAAVGFIIGIAFLLFLDKAIPHLHIGCDESEGPKCTLKKSTMLV LAVTIHNIPEGISSGAVFAGLLTNNANVTVAGAFALSIGIAIQNLPEGFIVSLPIRSEGN GRGKAFLYGTLSGVVEPIAGGITVLLAAYITPILPYLLAFAAGAMIYVVVEELIPESAEG SHSNIGTVGFALGFVLMMVLDVALG >gi|224461045|gb|GG657759.1| GENE 86 91985 - 92464 633 159 aa, chain + ## HITS:1 COG:SA0023 KEGG:ns NR:ns ## COG: SA0023 COG1576 # Protein_GI_number: 15925729 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 1 159 1 159 159 167 53.0 1e-41 MNITILAVGKVKESFYRQAVEEFKKRLSRYCRLQIVEVQDEKTPDNAGDALERQIKAKEA ARLQKYIKDTDYVVTLEIEGQQPDSVALADKLQRLGVDGTSSIVFAIGGSLGLHEDITKR SNYRLSFSNMTFPHQMMRVILLEQIYRSYRIINGEPYHK >gi|224461045|gb|GG657759.1| GENE 87 92436 - 93437 711 333 aa, chain - ## HITS:1 COG:BH3634_1 KEGG:ns NR:ns ## COG: BH3634_1 COG2207 # Protein_GI_number: 15616196 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 8 124 4 116 132 77 37.0 5e-14 MYEWQKQIQMIVDEIDSCIKNYNGEDLTLRFLSRRLGYSEFYTTRKFKEILGIQFRDYLR LRKLAFALKEIRDSEKSILDIAFDYGFSSHEAFTRAFKGTYGVTPSEYRKNPKPVVLRTK INPFDRYFLGLGEIGMIKSTDDVKIYFVTIPAHKFLHIKNYESNGYWDFWQKQNQIPGQD IETICGLLDSIKGKLDDDGGSDSNSGNGQVMAYINDPDGRLCDWGILRTECYGARLPADH KGEVPAQMLMIDIPEAEYIVFEHGPFDYEQENRSVEEKVEKAMADFDFEGTGYCYDTSPG RIIYFYHNPEKFWKYIRPIRKSETLICDTVPHL >gi|224461045|gb|GG657759.1| GENE 88 93729 - 96110 2108 793 aa, chain + ## HITS:1 COG:no KEGG:bpr_I0747 NR:ns ## KEGG: bpr_I0747 # Name: not_defined # Def: ABC transporter permease # Organism: B.proteoclasticus # Pathway: not_defined # 1 793 1 790 790 365 29.0 5e-99 MIRNILKKDMRRRKSVNIILFLFITMATVFLASSVNNILVVTSSVEYYMDYANVPDVNLI VIGDSERTEIESWIKKNGPGVKEYDYNTLMALINKNITVEKDGKDGPLDSGGGGMYLGTT DAGYCRVYDRNGAPFVLNDNEAAVSKSIMERNGLKEGDTVTVRLGDENREYRIKAETKDA AFGNEMVGMSRILVNEDEYAHFTDKNDSDIFGLYYVDTDKVNPFIKELNDQNFGTVINAI TKDTYSLVYSFDMIMAALLILIGICLILVALLLLRFTLVFTIEEDYREIGIMKAIGMKES AIQKIYLAKYFVLVCAGALTGFAASVPVSRQMVAGVSNNMIMEDSSANLGVNIVCTLSVV FFVLLFCYKCTSRVNKISAIAAIRGGHTGENYKRKRGLTLHLRKKLPVPVYLGLNDICRQ TRRYLILMIAFCLSFILITIPLNTLNTMRSREMAAKFAIDPDSAVYVGGIERPGESSYKT GRELEKGMKRVEEELAEKGYDASLTGLPIYFFSYGEPGKKGRNKIMTVQTLGENNKYMTY IDGEAPVLQNEIAFSQKIMEENGWEIGDKVETEIGGEKFSFLITGTYSDYMQLGRSARLN PGTDLRDEAMFGWWNIMVDMETDNSQAKTAEILEKELPGYDWSTAQEAVDSNVGGIQDSL HDLVMPMTAMLCGVIMLITLLMERLFIVREKGEIAMMKSTGFRNGSIRSWQVLRMTGVAL VSMAAAVPLSLASNQWVLKPIFAVMGADVDIQVVPWQIYGVYPGILLAGIIAASYLAARK IKKIDIRELNNLE >gi|224461045|gb|GG657759.1| GENE 89 96123 - 96893 222 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 22 228 16 220 245 90 28 4e-16 MRALNVRNLCKTYINNKRQINVLRNVDLEIEEGEMVGIMGPSGSGKTTLLYTVSGMDSAT AGNVEFFGRNMSGLTAGEMSDLRLTEMGFVFQQMYMLKNLSIYDNIILPACQSPEGRSRE GRERINDRAKVLMHKLGISEIAGNDINEVSGGQLQRACICRSLINCPKIIFADEPTGSLN KQNSIEVMEELNHIHAEGTSILLVTHDMKVASRCSRVLYIEDGNIRDEIALGGWKETEDP RQRERVLNDWLIKLGW >gi|224461045|gb|GG657759.1| GENE 90 96901 - 97578 744 225 aa, chain + ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 222 1 228 230 169 39.0 3e-42 MYDILLVEDNEELAGLLRDFLVDRGYSVLRAARGDDAVRYAERGEVRLVLLDIMLPGMDG FAVCRQIRKSQNVPVLIMSAKSGKQNKLTGYELGADDYMEKPVDPEILSAKVNALLKRSG RAQEEMLLVSGEITLNRKARTVNLRGKPLELNVKEYELLLLFVRNPGKTLRKEYIFGNVW GTDSFSESQTLTVHIKMLRAKIEENPREPKRILTVWGVGYRYEEI >gi|224461045|gb|GG657759.1| GENE 91 97565 - 98839 1111 424 aa, chain + ## HITS:1 COG:lin2515 KEGG:ns NR:ns ## COG: lin2515 COG0642 # Protein_GI_number: 16801577 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 199 421 151 375 380 102 26.0 2e-21 MRKFNTVIAAAVLFYLLTAAAAGYGIHNAATVQEQVHKIEINRIYSSLRDGVPQENIDLS EFRYVKGISYLPAGQMEEEDMAAAFYEEKNHLGSQVIPVFTDGSLEGLWRFDYEKPVFQA ENILLITEVCLGIMGAVLISVLCYLRSQLIGPFLRLKTLPYELANGHLSGEVPEEKSRFF GDFFWGMSQLKDTLALSRKRRLELEKEKKTMLLSLSHDIKTPLHAIRLYGRALEEDLYHG EAQRRHAARQIGEKASEIERHVEEIMRNSREDILDIHVDNGEFYQAELVKRILDTYEEKC KIRMVDLEVGPYDDLLLKGDMERTLEVIGNLFENAFKYGDGRSITLTFYEEDYCHLVRVY SSGNPVTDNEFNHIFESFFRASNSRGLEGNGLGLYICREIMRKMDGEIFAQKEEEGMAFV LVFR >gi|224461045|gb|GG657759.1| GENE 92 98960 - 99793 763 277 aa, chain + ## HITS:1 COG:BH1803_2 KEGG:ns NR:ns ## COG: BH1803_2 COG2340 # Protein_GI_number: 15614366 # Func_class: S Function unknown # Function: Uncharacterized protein with SCP/PR1 domains # Organism: Bacillus halodurans # 155 275 7 129 132 103 43.0 3e-22 MKNRIFITLAAAAVATSMAAPVVSQAAEGNGPVRKGYIIAGNGSSVSVNEITNEELKQKL NIEEIINKLCPGGTGGGQNKPDNKPDNRPDNNKPDNNKPDNNKPDNNKPDNNKPDNNKPD TNVPETPDKPGTPEKPETPDTPDGQPDQGENSGKSFAEQVAVLVNKERAKEGLPALKMDA SVSKAAFVRAKETEISFSHTRPDGRGFNTALTEQGVKFRGAGENIAWGQKSPEEVMKGWM NSPGHRANIMNSKYTTIGVGYYQNAKGTNYWTQLFTY >gi|224461045|gb|GG657759.1| GENE 93 99916 - 100482 550 188 aa, chain - ## HITS:1 COG:CAC1633 KEGG:ns NR:ns ## COG: CAC1633 COG1633 # Protein_GI_number: 15894911 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 14 187 44 231 236 74 26.0 1e-13 MNNELNRNCECECNDVKPQASKEPSYAASGPYPPVRICERNRAYGRMMLDNMGGQNSEMS AVSLYVYNNLLIDEDARLSGIFHKISIVEMHHLHIFGEIARMMGENPRLWTYRGNQMTYW SPSYNNYPIEIRPLLTNALNGERKTVQKYEEQCRRIKDIHIVECLKRIIQDEEIHIHIFE TLLEEYCR >gi|224461045|gb|GG657759.1| GENE 94 100654 - 102093 1485 479 aa, chain + ## HITS:1 COG:mlr9675 KEGG:ns NR:ns ## COG: mlr9675 COG1502 # Protein_GI_number: 13488516 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Mesorhizobium loti # 66 436 22 413 466 112 24.0 1e-24 MKKRTSEKTVFKWRYLLAVIILFISYVFLGTVLSYVRQPGVSRAYEKEFDPKDCYCDEVS CDRACVIEDNERALEERLRMIGQAKERIILSTFDFHDDSSGKDVIAALIDAAKRGVDIKI LVDGFSALQQMDGSEYFYALSTMDNVEIRIYNRINLLTPWKSMGRLHDKYVIVDAGLYLL GGRNTYDYFLGDNGYKNYDRDVLVYSQDPENEESSIHQLEAYFESVWNLEDCKVFHDDEE DASRPDTVKAKRELEGRYRRLLQQYPAIGESADYVSMTFEVNKITLLSNPVHVYSKEPRV FYSLVQLMKETEEEIDIHTPYIICNDWMYDSLEEVCKGGGKAALMTNSAANNGNPFGASD YVKNKGRLLETGITVYEYEGGVSYHGKSITIGDELAVVGSFNMDMRSAYLDTELMLVIDS KEVTGQLKGYMKEYEADSVKVLDEKHYEVPEGVERQKISGKREFRVKVLALFNWLRFLM >gi|224461045|gb|GG657759.1| GENE 95 102151 - 103203 1105 350 aa, chain + ## HITS:1 COG:no KEGG:EF1030 NR:ns ## KEGG: EF1030 # Name: not_defined # Def: endonuclease/exonuclease/phosphatase family protein # Organism: E.faecalis # Pathway: not_defined # 1 348 1 350 351 372 52.0 1e-101 MKKVLKAVVVILLVIAAVIAAALILLTVREYRPEAVETLKPADGTETLKAGDTFTVLTYN TGYAGLSRDEDFFMDGGEKVMPDSRELVEHNLKGITSVLREQKADVYFLQEVDLDSKRSY HLNEKEYYEKELGLPGIFAYNFKCDYVPYPLPPIGKVESGLLTMTGIGMSEASRISLPES FTWPVKTCNLKRCMLETRIPVGGGDKELVLINFHLEAYDSGEGKIAQSKMLAQKLETEYK KGNYVIAGGDFNQTFEDMDKYPVHSRDNWTPGVVGKDDIPEGFSFAVSDNAPTCRLLNGP YSGNYEDSQVYVLDGFIVSDNVEVKELENIDTQFEYTDHQPVRMEAVLIQ >gi|224461045|gb|GG657759.1| GENE 96 103342 - 103887 596 181 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0280 NR:ns ## KEGG: Cphy_0280 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 180 1 179 180 201 57.0 1e-50 MDNELYELLAVNRNREELAAINSRNEKIGAQFGLGLTAEETKALIEAKNVSLKRHQRVEF GRGILDHIMFTFCDSQYISRENYAGTLMKLQDIFYKFKNEAQDRLTDEELLTFMKEQFEG VCFGDTEYLEGTCLERFAAAVRAGYRGYESDGGKGEYERLSCEKRWDSELYMEVLRELFW E >gi|224461045|gb|GG657759.1| GENE 97 103924 - 104757 838 277 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0279 NR:ns ## KEGG: Cphy_0279 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 277 1 277 280 245 46.0 1e-63 MEYKMEELIPVTAVLAEKYTSKESSSVTYETARMLLEAVVYCIEEPGLPGSFVPAKRKRP EAPEAYARGYKRVLDKVYSAKEVYDRLTEAFEDYGCGNYRDTIIKGMPRFFLYYDARFQP HDHILTLDYPTVNHYGNLCGIDLIYEYLCDIETESRLLSCFETAAVKELLGRTEERFGIR YMENLCALVLLNAIGCVIAERPLQSLTLADNEIEKIRRYFQEDDLQTVGQKTGAYIRIIT EAAGCGEIQDYFQVLRREYALRIFNGVEHRSLGGVFM >gi|224461045|gb|GG657759.1| GENE 98 104851 - 105156 368 101 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2613 NR:ns ## KEGG: Cphy_2613 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 101 28 125 127 79 39.0 5e-14 MKARKKERRQDIESQSFKNKVAEASEMPKDVVLGMPVLTITGQLEMSLENYRGILEYTDA LVRIQTKIGQIRIGGKNLQVAYYTNDEMKVTGRIESIEYHH >gi|224461045|gb|GG657759.1| GENE 99 105171 - 106484 1035 437 aa, chain + ## HITS:1 COG:no KEGG:Closa_2070 NR:ns ## KEGG: Closa_2070 # Name: not_defined # Def: sporulation protein YqfD # Organism: C.saccharolyticum # Pathway: not_defined # 1 432 1 414 414 263 34.0 9e-69 MLLSMIRYIKGYVQIRVIGYSAERFLNACSHRGIYIWGLRPSNGAYEMYMSVDGFRRLKP IIKKTGTRVVIVRRFGLPFFLHRYRKRKLFFIGAFLSVALIYILSLFIWDIDIEGNLSQT DENILEFLQTKEVEHGMKKSNVDCARIVKDIRKEYDGIIWVSASIQGSRLLIQVKENEDS LPAAGGDEEIEEGADKESAETEEEPQDIVADRDCTITEMITRKGIPVVKEGDAVKKGDIL VCGRVPVNNDAGETTGYHYNRSDADIKGKTVLPYEQEQDLTYIEKEFPAVTREELYLKVG KYRFGLGSRNHDYENYEVTSHEKRWKIGEEFYLPVSTGTRTIQPYTPKKHKYSEKQLQSI LSARFNKYCEDLEKKGVEIIENDVKIYTGSEEARAKGNLTVIMPIGTPAPTEVIDVPKEK ENETTGENIDGNDGDSH >gi|224461045|gb|GG657759.1| GENE 100 106459 - 107448 1278 329 aa, chain + ## HITS:1 COG:Cgl2236 KEGG:ns NR:ns ## COG: Cgl2236 COG1702 # Protein_GI_number: 19553486 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Corynebacterium glutamicum # 3 329 11 336 339 317 52.0 3e-86 MGMMETVIDIPAEHEQNVFGQFDAFAKKIERTLHVTLIARDGSVKIMGEAVQTERAKKVL EQLTGLSVRGNTIQEQNVDYTLSLVMEDSAESVVEMDKELICHTLQGKPIRPKTLGQKKY VDAIRSKMIVFGLGPAGTGKTYLAMAMAITAFKNNEVGRIILTRPAIEAGEKLGFLPGDL QSKIDPYLRPLYDALYQIMGAESFLKNSEKGLIEVAPLAYMRGRTLDNAFIILDEAQNTT PAQMKMFLTRIGFGSKVVVTGDATQKDLPSGQVSGLDVAVSVVKHIEDISVCQLTSRDVV RHPLVQKIVKAYEDYESRGRAKGKDRRRK >gi|224461045|gb|GG657759.1| GENE 101 107454 - 107948 349 164 aa, chain + ## HITS:1 COG:CAC1293 KEGG:ns NR:ns ## COG: CAC1293 COG0319 # Protein_GI_number: 15894575 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Clostridium acetobutylicum # 22 164 22 166 166 100 40.0 2e-21 MTLYFEEEGETVLPIPCEELARKVAEEALDYTGCPYEAQVNLLLTTNLQIQEMNEEFRGI DRPTDVLSFPMAEYEHPGDFGCLKEQEDCFDPESGELLLGDIVISKDKVISQAEEFGHSL KREYAFLIAHSMLHLTGYDHMEEKERLDMEAKQREILNRLNILR >gi|224461045|gb|GG657759.1| GENE 102 107963 - 109633 1819 556 aa, chain + ## HITS:1 COG:CAC1016 KEGG:ns NR:ns ## COG: CAC1016 COG2244 # Protein_GI_number: 15894303 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Clostridium acetobutylicum # 17 536 11 522 539 173 28.0 9e-43 MAEKRRKKEANFLIQGSILAIAGVVTKIIGVIYRIPLRNIAGQEGMGYYGVAFSIYIVAL TLTSYSLPLAVSKLVSARVAVGEYKNAYKVFRGALMFAVMAGGFVALLIFFGAGFIANNI MSIDMSVYALRVLAPCILIAAVLGVMRGFFQGIGSMVPTAISQIIEQIVNAVISVTGAYV LFSVGKGIAKTRGNDSYGPAYSAAGGTLGTVAGALTALLFVVFIFMAYKKVFRRKMRRDR SRHKESYNRIYKVLLVTIAPVILSATVYNICDFVDSAMFSNIMAAQGEKKIVYTKLLGIL TGDYTTLINVPLSIASAFASSLIPSLVATAQTGSRKQIHSKINMVTRFNMMIAIPCAVGF LVLAKPILDLLFYGSDNTTSAYMLQLGAISVVFFCLSTVTNSVLQGLDDMMTPVKNAAIS LVIHVISLFLFMVIFKWNIYAVILSKIVFSGAICILNSHALRSRIGYVQEQKRTFIIPAI SAAVMGVITVVVHLVVELFIGSKAATILALVAALISYGITLILLGGLTEEEMLQMPKGAA IVTVCRKLHLIRGEYR >gi|224461045|gb|GG657759.1| GENE 103 109704 - 110087 450 127 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567936|ref|ZP_03776961.1| ## NR: gi|225567936|ref|ZP_03776961.1| hypothetical protein CLOHYLEM_04009 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04009 [Clostridium hylemonae DSM 15053] # 1 127 1 127 127 205 100.0 1e-51 MKNKYGIGFFAAAIITVLAVSSAYQLSYQKAKERAEAETKIEKEQETAKARTEPSVRTEG SALKEDCYYLMEVNGYIVVYLSDKKTPYEYTNIQYDELPAAVREEIRNGKYIEDTETLYG FLENYSS >gi|224461045|gb|GG657759.1| GENE 104 110169 - 110390 253 73 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2602 NR:ns ## KEGG: Cphy_2602 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 66 1 66 69 64 62.0 1e-09 MDEKKIARINELYHKSKAEGLTEAERKEQQVLRREYVDAFKQNLRSQLNQISIEEADGTI TELGEKFGKKRGN >gi|224461045|gb|GG657759.1| GENE 105 110368 - 110913 593 181 aa, chain + ## HITS:1 COG:BH1417 KEGG:ns NR:ns ## COG: BH1417 COG0212 # Protein_GI_number: 15613980 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Bacillus halodurans # 1 177 1 181 186 106 38.0 2e-23 MAKKEEIRQEILKKRLDISPVEWQNGTESITKEVTAHAWFREATDIYCYVDCRKEAGTKL IIEEAWRLGKTVWVPRTAGEEMDFYEIHSFTELSRGCFGVLEPEGTTAADGSDGLMIMPG VVFDEHRGRLGYGKGYYDRYLGKHPGLHTIAAAFDLQIVDEVPQEDEDVRPQLIITETRT I >gi|224461045|gb|GG657759.1| GENE 106 110935 - 111117 299 60 aa, chain + ## HITS:1 COG:no KEGG:Bacsa_1905 NR:ns ## KEGG: Bacsa_1905 # Name: not_defined # Def: hypothetical protein # Organism: B.salanitronis # Pathway: not_defined # 5 59 3 57 58 64 49.0 1e-09 MQFGLPKDPMLLLSVVNTKIRDYYHTLDAMCEDMQIDKNTIVDTLKGIDYEYDESRHQFV >gi|224461045|gb|GG657759.1| GENE 107 111092 - 112525 635 477 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 42 477 3 437 451 249 34 6e-64 MNPDISLSSEIPETEPQRQYYYIEKAKQYVTEKAREIARPLTFCVTTFGCQMNARDSEKL RGILERIGYEEAAEDEADFVIYNTCTVRENANTRVYGRLGQLKPRKSRNPHMMIGLCGCM MQEPEVVEKLKKSYRFVDLVFGTHNIYKFAELIVSRFESGGMVIDIWKDTDKIVEDLPNE RKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSRAPEAIIREIEHLVEDGVTEVMLLGQN VNSYGKTLDTPVTFAALLKEIEKIEGLERIRFMTSHPKDLSDELIEVMGSSHKICRHLHL PVQSGSTDILKKMNRHYTKEQYLELVRKIREAVPGISLTTDIIVGFPGETEEDFQETLDV VRRVRYDSAFTFIYSKRTGTPAAVMEEQVPGEVVKDRFDRLLGEVQSIAREVCSVHEGSV QRALVESVSDHDSTLVTGRLGNNLLVHFPGSPDLIGTYADVELTECKGFYYIGKACR >gi|224461045|gb|GG657759.1| GENE 108 112603 - 113019 480 138 aa, chain + ## HITS:1 COG:no KEGG:Clole_2737 NR:ns ## KEGG: Clole_2737 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 1 138 4 141 141 104 38.0 1e-21 MKKISEYLFFISAGGCIYYTFEVIFRGFSHWTMFLLGGICFLFFEIQGRMVHWEDALWLQ LVRCIVFVTSMEFITGIIVNKWMRLGVWDYTGQPFQLFGQICLPFVVIFSGLSVIGIIVS GYLSHWLYNEPKPHFHVL >gi|224461045|gb|GG657759.1| GENE 109 113099 - 115744 3538 881 aa, chain + ## HITS:1 COG:CAC1837 KEGG:ns NR:ns ## COG: CAC1837 COG0249 # Protein_GI_number: 15895112 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 4 878 3 867 869 853 50.0 0 MAELTPMMQQYVDTKKEYPDCILFYRLGDFYEMFFEDALTASRELEITLTGKNCGLEERA PMCGIPYHAVDGYLNRLVSKGYKVAICEQMEDPAAAKGLVRREVVRIVTPGTNLDTQALD ETKNNYIMCVVYIADRYGLSVADVTTGDYFVTELETSEKLFDEIYKFMPSELICNEAFYM SGMDMDLLKERLGIAIYALDAWYFDDALCQRTLKEHFKVSSMESLGLGDYDCGVIGAGAL LTYLTETQKTDLTHLSKLTGYAAGKYMMLDSSTRRNLELCETLREKQKRGSLLWVLDKTK TAMGARTLRKYIEQPLIDKEEIERRLDAVEEFKEGAIAREEIREYLSPVYDLERLVCKIT YKSANPRDLTAFKSSLAMLPHIRCILGDMKSPLLRGLFDSLDTLEDLCSLITDAILEEPP IAMKEGGIIREGYNEEVDRLRAAKSDGKEWLAKLEEQEREKTGIKNLRIRFNKVFGYYLE VTNSFKNLVPDYYTRKQTLANAERYIIPELKELEDTILGAEDKLYALEYELYCQVRDAIA AEIVRIQTTAKAVAQIDVFTSLALVAERNNYVRPKINERGIIDIKDGRHPVVEKMIPNDM FIANDTFLNDRKNRISVITGPNMAGKSTYMRQTALIVLMSQIGSFVPASSADVGLVDRIF TRVGASDDLASGQSTFMVEMTEVANILRNATGRSLLILDEIGRGTSTFDGLSIAWAVIEH ISNSRLLGAKTLFATHYHELTELEGKIDNVNNYCIAVKEKGDDIVFLRKIVKGGADKSYG IQVAKLAGVPDTVIERAKEIVEELSHADITARVKDIAVNGHEAKIKTKKYDEVDLAQMSL FDTVKDDDVIAEIKNLDVSNLTPIDALNTLYQLQNKLKNRW >gi|224461045|gb|GG657759.1| GENE 110 115746 - 117833 1727 695 aa, chain + ## HITS:1 COG:BH2368 KEGG:ns NR:ns ## COG: BH2368 COG0323 # Protein_GI_number: 15614931 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Bacillus halodurans # 1 695 1 637 637 383 35.0 1e-106 MNKIQVLDQVTIDKIAAGEVIERPASVVKELAENAIDAGATSITVEIKEGGISFIRIADN GCGIGREDVPSAFLRHSTSKIRSVEDLVHIGSLGFRGEALSSIAAVSQVELVTKTKADTF GTSYRIAGGKEEALEDTGAPDGTTFLIRQLFYNTPARRKFLKTPMTEASHVGELVTRLAL SHPEISFQFINNGQSKVHTSGNGSLKDVIYHVYGREIAANLLAVNYERTGMKITGFLGKP LISRGNRNFENYFINGRYVKSNMIAKAIEDAYKDFTMQHKYPFVVLHMEIDGEHIDVNVH PTKMELRFNNQQDVYNSVYEAVDRGLHAEEMIPHVELPEPPGGETPSVRPAEQKPEPSPE KEYAAQRPPVKEPIQQAQPMRETPRQTQPVKEQPVRAEAPSGKGTAQRDVNYFLEEMKKR VRSYHEQNSSAEVQDKNAIFKPGIQADRIREAAAYAKTDAKADDVQRNSAPLKETDSAGK QMESGTAKQMDMFEEKFLDRERKAEYKLVGQVFDTYWIVEFHDSLYIIDQHAAHERVLYE RTLKNMKTREFTSQYISPPIILDLTMQEAELLTMYMEQFTKVGFEIEEFGQDSYAVRAVP DNLFSIAKKELLMEMIDSLSDEISRTLSPDLIDEKVASMSCKAAVKGNMKLSAAEVDTLI NELLMLENPYHCPHGRPTIIAMTKRELEKKFKRIV >gi|224461045|gb|GG657759.1| GENE 111 117836 - 118807 1059 323 aa, chain + ## HITS:1 COG:CAC1835 KEGG:ns NR:ns ## COG: CAC1835 COG0324 # Protein_GI_number: 15895110 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Clostridium acetobutylicum # 3 301 2 300 309 305 51.0 6e-83 MKKPLVVLTGPTAVGKTKASIALAKAIGGEIISADSMQVYKYMDIGSAKIRPEEMEGIPH YLVDELMPSEEFNVVRFQKMARQAAECIYEKGRIPIVVGGTGFYIQALLYDIDFTETEAG TDIRNRLAGYAQRYGADKLHERLAEVDEASAAKIHPNNVKRVIRALEYYEQTGKRISEHN ERERMKESPYSAVYFVLTDDRETLYDRINRRVDKMMEDGLVGEVRRLRQMGYTKELVSMQ GLGYKEILDYLDGSCTLEEAVYTIKRDTRHFAKRQITWFKRERDVIWIDKGAYGHDEEKI LHAMIKHLEGVLCLENYSGGTSS >gi|224461045|gb|GG657759.1| GENE 112 118771 - 119082 378 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567945|ref|ZP_03776970.1| ## NR: gi|225567945|ref|ZP_03776970.1| hypothetical protein CLOHYLEM_04018 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04018 [Clostridium hylemonae DSM 15053] # 1 103 1 103 103 197 100.0 2e-49 MFRKLFGGNQFLKKMNTLMELYSRSHNAAATYKQLLELAPLIRTNGEEALYDLNRAALLY DMKRYRESADIVLEIKPLNPEFDARCASLKTKIMNAWQGGDSY >gi|224461045|gb|GG657759.1| GENE 113 119084 - 120367 1363 427 aa, chain + ## HITS:1 COG:BS_ynbB KEGG:ns NR:ns ## COG: BS_ynbB COG4100 # Protein_GI_number: 16078807 # Func_class: P Inorganic ion transport and metabolism # Function: Cystathionine beta-lyase family protein involved in aluminum resistance # Organism: Bacillus subtilis # 23 425 17 421 421 448 53.0 1e-125 MQDITKLYEEMGIRETVLAFGRETETALKDRFDEIDRTAEYNQLKVIRAMQENRVCEACF NYASGYGYSDQGRDTLEEVYASVFHTDSALVRPQITCGTHALSLALGACLRPGDELLSPV GKPYDTLEEVIGIRPSKGSLAEYGITYSQVELLEDGTFDYDRIRAALNDRTKLVTIQRSK GYQTRPSFSVRQIGELIAFVKRLRPDVICMVDNCYGEFVETLEPSDVGADMVVGSLIKNP GGGLAPIGGYIAGRQDLIDACGYRLTAPGLGREVGASLGVMQSFYQGLFLAPTVAASALK GAVFAASLYERLGYGVVPGGSESRHDIIQAVELGTPEGVIAFCRGIQAAAPVDAYVTPEP WAMPGYDSDVIMAAGAFVQGSSIELSADGPIKPPYAVYFQGGLTWPHAKLGILMSLEYMA REGLVKI >gi|224461045|gb|GG657759.1| GENE 114 120390 - 121619 860 409 aa, chain + ## HITS:1 COG:CAC3590 KEGG:ns NR:ns ## COG: CAC3590 COG2081 # Protein_GI_number: 15896824 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 4 402 3 402 405 267 39.0 3e-71 MGTIAVIGGGVSGMTAAAAAARKDRRAGVYILEHNDSLGKKILSTGNGRCNLTNLNMSAA CFRGGDQEIVEAVLRRFGGRQTEEFFHSVGVLTHARGDYVYPRSEQAADVRESLQMELAR LRVGCHMNKHVKKIRKEGQEFIIESGGKQFRADKVILACGSRASKIAGSDGSGYTLAREL GHTLEPVVPALVQLKVRGNPFAKAAGVRTEARIAAIVGGREAASDTGELQITSYGVSGIP VFQVSRFISRGLYEKRRVQTEIDFLPEMSLQETERLFIERRQQFRGRSAGEFLTGVFSRK LIPRLLELAGIRLNTPAEGITPKQLKSLSYVCKRTVLDIEDTNGFEQAQICAGGVKTSEI CPDTMESLLMPGVYIVGELMDVDGMCGGYNITYAVATGYIAGCHAADAV >gi|224461045|gb|GG657759.1| GENE 115 121705 - 123354 1298 549 aa, chain + ## HITS:1 COG:L195271 KEGG:ns NR:ns ## COG: L195271 COG2509 # Protein_GI_number: 15673161 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Lactococcus lactis # 1 533 1 525 535 484 48.0 1e-136 MIRMTQLKLPADHTRDELKDKILKLLRIDTHALLSYAVIKQSLDARKKPELYYVYTVDVH VSDEQAVKRRTRHKNIMFCRPEPDYVLRARGDQAPAHRPVIIGTGPAGLFCGYELALLGY RPILLERGADVDRRLADVKQFWEEGKLNIHSNVQFGEGGAGTFSDGKLNTLVKDPQRRNA RVLKVFTEHGAPEEIRYQNKPHLGTDMLTGIVKNMRKSIEKLGGEVRFDSLVKDIRTVIE GDARRLAGLLVEDLRSGERYWLETETAVFAIGHSARDTFAMLEKQGLPMEAKSFAVGVRI EHAQTMVDKEQYGEANAGKLPPAAYKLTASASDGRGVYTFCMCPGGYVVNASSEEGRLAV NGMSYHDRGGENANSAVIVTVSPDDYGADGPLSGVEFQRRLEEAAFREGGGNVPVQLFKD FRENRPSSGGGNVSPQIKGAYRWANVRSIFPTFLARDIEEGIAAFDRKLPGYAGDDAVVS GVESRTSSPVRLVRGEDMESGIRGIYPCGEGAGYAGGITSAAMDGIRTAEAIVRIYRPFD KRDEALRNF >gi|224461045|gb|GG657759.1| GENE 116 123436 - 123696 404 86 aa, chain + ## HITS:1 COG:no KEGG:Closa_2047 NR:ns ## KEGG: Closa_2047 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 86 4 83 83 75 60.0 8e-13 MKGTGSKNAWALFLLILTGIVLGGFIGMLADKVPALSWLGYGQSFGLDEPVVMNLGLLVI TFGLTIKITIASIIGVIISIIIYRFL >gi|224461045|gb|GG657759.1| GENE 117 123770 - 124426 636 218 aa, chain + ## HITS:1 COG:CAC1241 KEGG:ns NR:ns ## COG: CAC1241 COG2003 # Protein_GI_number: 15894524 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Clostridium acetobutylicum # 2 218 15 229 229 188 45.0 5e-48 MERPYEKCERRGAGSLSDVELLAVLLRTGTRGENALTLAQKILYHTGETGILSIHQFSIE RLMQIKGIGKVKAVQISCISELAKRLAKACAGESLCFTRPETIAGYYMEDLRHEKQEQMK LLMLNSKSKLIGETDISKGTVNASLITPRELFIEALQKNAVAIIVLHNHPSGDPSPSRED RLLTQRIREAGALIGIDLLDHVIIGNNCYMSFREEGIL >gi|224461045|gb|GG657759.1| GENE 118 124443 - 125465 1178 340 aa, chain + ## HITS:1 COG:CAC2858 KEGG:ns NR:ns ## COG: CAC2858 COG1077 # Protein_GI_number: 15896112 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Clostridium acetobutylicum # 4 317 7 322 340 189 34.0 5e-48 MARNIYGLDLGSYEIKVYDKKKDEIWKEKNVIAIANKKEIFAVGDDAYEMYEKAPDNIEV IFPMQEGVISHFNNMQFLLQNLLKKERQFARGSEYVIAVPTDVTEVEKKAFFDLVIHSTA KAREVNIVERSIADAVGLNLDVKNTKGLFIANFGGETTELSVLAGGGMVLNRLVKVGGVT FDHSVANLVRHSHDFLIGRLTAEMLRKKFGVFTEDTSSTLRVAGRDMIMGVPIQKDISIS LVRAALKEPLQECIRAVYSLLDRTPPEVRRAIYKNGIFLTGGIANTPGLEDYIEKAVGIP VRTAVEPDICAVTGLKKIIMSKDLRKLAYSMLDENYRWMR >gi|224461045|gb|GG657759.1| GENE 119 125467 - 126348 1217 293 aa, chain + ## HITS:1 COG:CAC1243 KEGG:ns NR:ns ## COG: CAC1243 COG1792 # Protein_GI_number: 15894526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Clostridium acetobutylicum # 55 274 60 273 283 102 31.0 9e-22 MKIKNQSSLSSKYWLLIIAVVCVILMGIGSLPGVRGPLRFVANYTVIPMQKGISYVGMWM SDFSKNFETMNDMKKENSELQSKVDELTIDNTRLRQDQYELERLRELYKLDENYSDYNKI GAHVIANNGTNWFSDFTIDKGSKDGIKVNCNVMAGSGLVGIVTEVGPNYAQVRSIIDDAS NVSGMVLSTSDTCIVRGDLKLMSDGRIRFEKLANNDNKIEVGEQIVTSHIGDRFLQGLFI GYISEIEVDSNNLTRSGYITPAADFSKLQEVLVITTTKQDMINKDAGTKDGGE >gi|224461045|gb|GG657759.1| GENE 120 126351 - 126869 512 172 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1743 NR:ns ## KEGG: EUBREC_1743 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 171 1 171 173 157 50.0 2e-37 MKRRVITLVIIIVCFLLGSTVFHVLSFAEIKPNLLIIVTASYGFMRGKKAGMAVGMISGL LMDIFWGGTLGFYTLLFAVIGYVNGCFRRLFYDEDIKLPIALIAASELVYGLVLYICFYM LHGDFSFGGYLTKVIMPELVYTILATLVLYQIILHINRRLETEEQRSASKFV >gi|224461045|gb|GG657759.1| GENE 121 126862 - 129792 3515 976 aa, chain + ## HITS:1 COG:HI0032 KEGG:ns NR:ns ## COG: HI0032 COG0768 # Protein_GI_number: 16272007 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Haemophilus influenzae # 612 951 279 620 651 138 27.0 6e-32 MYSLWDRVKSGIYEVVKSRVFVAVIIFCVLSAILLQRVFYLQIVKGQSFADEYKLQIQKT KEIQGTRGKIYDRNGNLLAYNELAYSVTIEDNWEDSADKNKEINKVINTVIDIVESNGDT VINNFGVILDGDGNYKFVAENDTQRLRFIADVYGKKTIDELSDKQKSSTAQDIIDYLCTD KLYGYGINEKKMDKEAVLKLVNIRYAISLNSFQKFIATTIAEDVSDETVAVIMENLDSLQ GIDIEEESLRRYTDSKCFASVIGYTGQISQEDYDALSKKEQEEYSKQDTVGKAGLEKTLD KQLQGKKGQVKLYVNSVGKVIETVKGKDPEAGNDVYLTLNANLQKAAYHIIEQELAGILL SKIQNTLDFDRTKVEDGSDVIIPIGDVYNTFISNDILDMSHFGEEDAGTTEKEVAAIFGS RKEEVLSSLTSALTDPDERAYKDMSKEMQAYMTYIVSEILTNTTGVIMSDAIDTNDSTYK AWKDDETINVYTYLNYAISKNWVDTSKLKEFVKDGKYSDAGELYQGMVKYIIDYVESNSG FDKLIYKYMIKSGAVTGRQICLMLYEQKILEYDEAQYNGLLSGSIGAYDFLRGKIQDLTI TPGQLALEPCTGSIVMTDTNSGQVLACVSYPGYDNNRLANAMDSDYYNKLLTDQSRPFYN NATQEKTAPGSTYKPLVAVAGLTEGVINTDSYITCHGIYEKIQPSPKCWIYPQAHGTLNV EGGIENSCNSFFYEVGYRLGLKEGGLSQVASDNNEGSATNSYYSSDLGLDKLKKYAEAFG LNETSGLEIDESSPQISDEDSVRSAIGQGRNNYTTSQLAKYITAVANKGTVYDLTLLNKV TSVDGKTIKEYEPKVKNKLSDVTASTWNAVHNGMRAVIVNHSATFSDLNTSSLKLSGKTG TAQQSTTHPDHGLFVGFAPSDSPEVAFAIRIANGYSSTFASEVGRDVMKYYYEIVPEDEI ITGEAATIGSSATGGD >gi|224461045|gb|GG657759.1| GENE 122 129811 - 130401 446 196 aa, chain + ## HITS:1 COG:FN0175 KEGG:ns NR:ns ## COG: FN0175 COG0850 # Protein_GI_number: 19703520 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Fusobacterium nucleatum # 1 178 1 177 216 111 36.0 7e-25 MKDPVLIKSNKYGITIRLDGEMPYRDLLPEVKTRFESAAHFFNNAQMAVEFEGRTFTEDE ERLLIETIEDAAGIHILCVIEKNTYTEQMHKRMLDESLSEIHERDGQFYRGTLRGRQILE SETSIVIIGDVEEGAKVAAKGNVVVIGTIYGTVIAGAAGDDSAVIAALHMSPKRLRIGDI EVKPNVGGSLSWAKLS >gi|224461045|gb|GG657759.1| GENE 123 130383 - 131174 860 263 aa, chain + ## HITS:1 COG:BH3027 KEGG:ns NR:ns ## COG: BH3027 COG2894 # Protein_GI_number: 15615589 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Bacillus halodurans # 1 260 1 261 264 319 61.0 4e-87 MGEVIVITSGKGGVGKTTTTANIGAGLSQFDKKVIVIDTDLGLRNLDVVMGLENQIVYNL VDVIEGTCRLKQALIRDKRYENLWLLPSAQTKDKTAISPGQMKKLTSELKEEFDYILLDC PAGIEQGFQNAITGADRAIVVTTPEVSAIRDADRIIGLLENNGLKQVELIINRIRMDMVK RGDMMSVDDVTEILSVPLIGALPDDEHVVIGTNQGEPVIGIDSKAGRAYLNICKRIMGIE VPFMDLNTESGFFTKLSHLFKKD >gi|224461045|gb|GG657759.1| GENE 124 131187 - 131399 166 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225567957|ref|ZP_03776982.1| ## NR: gi|225567957|ref|ZP_03776982.1| hypothetical protein CLOHYLEM_04030 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04030 [Clostridium hylemonae DSM 15053] # 1 70 1 70 70 117 100.0 2e-25 MLKKSSVSIAKNRLKVLVTSDRVQCAPAAYDNICRELYKALSKYMELTEDEFDVEITRTR ILIKIAGEET >gi|224461045|gb|GG657759.1| GENE 125 131396 - 132520 1355 374 aa, chain + ## HITS:1 COG:PM1925 KEGG:ns NR:ns ## COG: PM1925 COG0772 # Protein_GI_number: 15603790 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Pasteurella multocida # 19 366 20 359 371 169 33.0 7e-42 MKLPRFTKPYRLKDYKFTLVISVLALSVLGVLVVGSANESYQNKQIVGLVFGLAVMAVVS LIDYVWVLNMYWLIYGFSILSLLLVLFIGDEVNGATRWINLGFTTFQPSELAKILLILFF AKFIMKHEEDINYKWTIIKYAVLAGIPLALIIVEPNLSTTICTALVICLLIYIGGLSYKF IGTVLLILIPAAIIFLSIVVQPDQKILKDYQQERILAFLEPEKYASDGAYQQNNSEMAIG SGQLTGKGLNNNTTTSVKNGNFILEPQTDFIFAIVGEELGFVGSCVVIALILIIVIQCIL IGLRSQDMAGKIICCGIGGLIGFQSFINIGVATKVLPNTGVPLPFVSYGLTSLVSLYIGI GFVLNVGLQPKKYQ >gi|224461045|gb|GG657759.1| GENE 126 132533 - 132928 547 131 aa, chain + ## HITS:1 COG:lin2020 KEGG:ns NR:ns ## COG: lin2020 COG1803 # Protein_GI_number: 16801086 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Listeria innocua # 1 131 1 131 134 158 54.0 3e-39 MNIGLIAHDSKKTLMQNFCIAYRGILSKHELFATGTTGRLIEEVTNLNIHKYLAGPLGGM QQLGAQIGQNDIDALIFLRDPLTPKPHEPDVNDVVQLCDMHNIPMATNLATAEMIILAID RGDLDWREMYR >gi|224461045|gb|GG657759.1| GENE 127 132954 - 133889 1017 311 aa, chain + ## HITS:1 COG:BH1573 KEGG:ns NR:ns ## COG: BH1573 COG1686 # Protein_GI_number: 15614136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus halodurans # 53 272 30 236 382 119 36.0 7e-27 MAGALLTGCSLLGAQDVAAGYEAEQYNKSIYKAGLFAEDLCVTAKDVPLADAPDTGSLSA AALFDVDKSDVDFAYNVHERLYPASTTKIMTALVAIKNADLSDVVTVGADADESSFAADE QTCGLKAGDRLTLEALLNGLLLYSGNDNAVAIADYVGGSMEGFAEMMNEEAARLMATESH FLNSNGLHNEDHYTTAYDLYLIFNECIKHEEFLDIIRAKSYTADITGADGNKRQITWEPT SFYALGEAALPQNATIIGGKTGTTKEAGNCLILLSEDGQSRPFISIVMGADTKAILYEDM TGLIEAIPADK >gi|224461045|gb|GG657759.1| GENE 128 133929 - 134141 276 70 aa, chain - ## HITS:1 COG:CAC0976 KEGG:ns NR:ns ## COG: CAC0976 COG2155 # Protein_GI_number: 15894263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 61 1 61 69 69 65.0 1e-12 MKWFDNTALTLVIIGAINWLLVGIFRFDLVAFLFGNLSWLSRIIYTIVGLCGLYLISLYG RISNTPGSRS >gi|224461045|gb|GG657759.1| GENE 129 134224 - 135180 878 318 aa, chain + ## HITS:1 COG:TM0515 KEGG:ns NR:ns ## COG: TM0515 COG1242 # Protein_GI_number: 15643281 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Thermotoga maritima # 5 307 1 302 303 272 44.0 5e-73 MGPNMYYYPYSEFLKNKYGEKVYKLPVNLPVTCPNRIAGRGCIFCAEPGTGFEAMDAQVP VAEQIIRTKEHISKKYKARLFIAYFQNYTNTFLPPESFRAYVTEAAKIKDIVEIAVSTRP DCITEEYLDILQKVSREHQVEITVELGLQTVNYHTLEKIGRGHTLAAFIDAVLMIRSYGF DICTHVILNLPWDDRSDCLETARVLSALKVNAVKIHSLYVAKNTPLCEAYENGTITLCSK EEYMERLICFLELLDPDMAVERLFSRIPEKDAVFCNWGMSWWKLKDELTKEMERRGTYQG RTYGYLHGAALHTLRDIR >gi|224461045|gb|GG657759.1| GENE 130 135197 - 136573 1606 458 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1735 NR:ns ## KEGG: EUBREC_1735 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 12 457 11 460 462 283 37.0 2e-74 MAGNDLTNIQVYRKKWNINIGVIIFGVIFIYLAVTVLIYLTDKKVSAYEVREGSILKDTA YTGFIVRQEEVVNAEGDGYINYFAPEGAKVGARTDVYTLSPGKLDFDEPDSGEATELTAE EQAAMLVKTQSFSENFNESQYSDVYTLKNNISAVLESKSSQSRQSQLDAMISEGKEGLQV YPASDDGIVIYSTDGYEGLELKDVTKDMVEKKDYERKSIKNNTKVRSGEPVYKLITDDAW TLAVVLEDETAQELAETKRVKVRFTKDNETTTAGFAVYNTKDYNIGFLTFTSSMIRYAQE RYLDIELILEDESGLKIPKSSVVKKKFYTVPEDYLTQGGNSRDTGVLIDTGRDNAEFQKA DVYYRDSETGMVYLNPDAFEEDTVLIRPDSNDTYRLKDTKSLKGVYNINKGYAIFKQIKI LCESDEYYIVESGNNYGLANYDHIALDGSSVRENKVVF >gi|224461045|gb|GG657759.1| GENE 131 136591 - 137286 694 231 aa, chain + ## HITS:1 COG:aq_274 KEGG:ns NR:ns ## COG: aq_274 COG0325 # Protein_GI_number: 15605814 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Aquifex aeolicus # 4 228 5 228 228 212 51.0 6e-55 MMKEKLENVEERIRAACERAGRNRSEVTLIAVSKTKPVETLREAYGLGVRVFGENKVQEL VDKYGALPEDIHWHMIGHLQRNKVKYIIDKAELIHSVDSLRLAETIEKEAEKHNITANIL IEVNVAREESKFGVMPEELDEIVEKIAGFNHLNVKGLMTIAPYVENPEENRAVFARLRKL SVDIASKNVDNMNMSILSMGMTNDYEVAVEEGATMVRVGTGIFGERDYAQV >gi|224461045|gb|GG657759.1| GENE 132 137310 - 137858 637 182 aa, chain + ## HITS:1 COG:BH2549 KEGG:ns NR:ns ## COG: BH2549 COG1799 # Protein_GI_number: 15615112 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 24 173 8 147 149 73 32.0 2e-13 MGVLDKFLDIMKLSDDDDYDDDDFFDDDYDDDDYEEKPKRSFFRKEKDYDDEEEDDYELP ARTSSKSSRSNNKVTPMRQPARRSGVSMEVCVIKPTSVDDAREITETLLSGRTVILNLEG LDLEVAQRIIDFTSGATFAINGNLQKISNYIFLVTPTNVDISGDLQDLLNTSFDASSMRS RF >gi|224461045|gb|GG657759.1| GENE 133 137867 - 138622 304 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227874237|ref|ZP_03992436.1| possible ribosomal protein S4e [Oribacterium sinus F0268] # 12 250 8 253 254 121 33 1e-25 MNKEEQLLQKRLAELSDLAFTRGIVTFSDFLNLNELNILHTTPKHMFPAHYETYGGYDLS ERQMVAFLPDALYYEYTYPLSVIEVAPVSRKFAEELTHRDYLGALMNLGIERSKLGDIIA GSFGAFLFVKEELAAYITGELTRIRHTAVQAVQRPAAEFTYEPKYEEMKGTVPSVRLDTV LSVAWPLSRSKLTAYIEGGKVFVNGKLITSNGYHLKESDRISVRGMGRLTYEGILSQTKK GRYMISVHKYI >gi|224461045|gb|GG657759.1| GENE 134 138657 - 139169 444 170 aa, chain + ## HITS:1 COG:SPy0826 KEGG:ns NR:ns ## COG: SPy0826 COG0597 # Protein_GI_number: 15674864 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Streptococcus pyogenes M1 GAS # 21 162 14 150 152 87 35.0 1e-17 MKEENRIKHYAAAVTAAAAGVLIDQLTKYMAIAKLKGQEPFVLLKDIFQFEYLENRGAAF GLFQNQRIFFFISVAVICAVVIWFYMKVPMERRFLPLRICAVMIVAGAFGNCIDRVRLNY VVDFFYFKLIDFPIFNVADIYVTVSTFALVILLFFYYKEEDFERIFHRRK >gi|224461045|gb|GG657759.1| GENE 135 139141 - 140055 308 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 37 289 38 279 287 123 34 5e-26 MSEFFTVENEEGERIDRYLAEMLSDRSRSYIQKLIKDSHILVNNKPVKANYRLSCGDMLE VTIPSAKEPDILPEDIPLHILYEDADIIIVNKPKQMVVHPAPGHYSGTLVNALMFHCGRE LSGINGMMRPGIVHRIDMDTTGSLIVCKNDMAHQALSEQLKKHSIRRIYEAVVHGGFKEE EGTVSAPIGRHPTDRKRMSTHAKNAREAVTHYKVLERFGEYSYIQCELETGRTHQIRVHM SSIGHPIVGDMVYGPRRCPFPGLQGQTLHAKTLGIIHPRTGEYLEVEAPLPQYFVELLEK LRDI >gi|224461045|gb|GG657759.1| GENE 136 140136 - 140783 768 215 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01147 NR:ns ## KEGG: EUBELI_01147 # Name: not_defined # Def: cytidylate kinase # Organism: E.eligens # Pathway: Pyrimidine metabolism [PATH:eel00240]; Metabolic pathways [PATH:eel01100] # 7 215 5 212 212 277 64.0 3e-73 MAEKTNTIITIGRQFGSAGREIGYKVAKDLGIKLYDKEMLDRAAKESGICQELFETHDEK PTNSFLYSLVMDTYSLGYSSGSYTDMPINHKVFLAQFDAIKKIADEGPCILVGRCADYAL QEYENVLSVFIHASLDARIRRIARIYELTDAKAKDMCQKTDKKRASYYNYYTNKKWADVE SYNFSLDSSVLGIEGTAEAIKRLVELKERGLDRKL >gi|224461045|gb|GG657759.1| GENE 137 140850 - 141587 721 245 aa, chain - ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 12 233 40 263 277 149 34.0 4e-36 MKLQQLLSYTRKAVDEYGMIEEGDHIAVGISGGKDSLTLLYALHGLRRFYPNKFELSAVT VDLGYSECDFTPVIKLCKELGVPYRIVKTDIAHILFEERKESNPCSLCAKMRKGALNQAV KEMGCNKVAYAHHKDDIIETMLLSLLFEGRFYSFSPRTYLDRMDLTVIRPVMFVDEADII GFKNKYDLPVVTSRCPIDGYTKRQYAKELVKQLNDEHPGARQRMFTAVLNGNIKGWPDRV PHIRQ >gi|224461045|gb|GG657759.1| GENE 138 141771 - 142472 730 233 aa, chain + ## HITS:1 COG:CAC0450 KEGG:ns NR:ns ## COG: CAC0450 COG0745 # Protein_GI_number: 15893741 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 226 3 220 227 216 50.0 2e-56 MQKIKILIVEDDKAIADAVAYTLEKEEFKFIIAGSAAEALPYIGRKDIGLYLLDVMLPDG TGYDICRKIKRYHNVPVIFLTACDEEANVVMGLDIGADDYIVKPFRIRELISRIRSVLRR YDSRQDIRPASVYCAGDIRVLTAEGKVYCKEEEICLSALEYKLLLFLIRHEGQIVTREQL LSHIYDIAGEYVNDNTLTVYIKRLRDKLETDTEGPEIIRTVRGLGYTIGESHV >gi|224461045|gb|GG657759.1| GENE 139 142465 - 143466 808 333 aa, chain + ## HITS:1 COG:CAC0525 KEGG:ns NR:ns ## COG: CAC0525 COG0642 # Protein_GI_number: 15893815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 328 1 327 329 203 33.0 3e-52 MFKNREITYTVIFMILVTAVSSAVCAHVPSFGPYVVLADGFLYLAGFLAFSSYRYGRLRK LSEFLRKAQSQMLPLEVPDQMEGELGVLKSEFYKLITKCHSQAELLSKDRQFLSDTISDI SHQLKTPMTSMNVMIDLLKDETLPAGKRLEFTHALRTQLSRMEWLLSAMLTMSRLDAGSI VLKKEEVNVSEMLSRASEHLLIPMELRDQTLILPENSPAVYQGDLHWSSEAVSNILKNCM EHTPYGKTITIETAENSVYTVITVKDEGGGISDKDKPHVFERFYKGANASPDSVGIGLAL AKQLITAQNGTVEIESVYGKYTVFIIKFYHFNM >gi|224461045|gb|GG657759.1| GENE 140 143559 - 145757 1608 732 aa, chain + ## HITS:1 COG:CAC0527 KEGG:ns NR:ns ## COG: CAC0527 COG0577 # Protein_GI_number: 15893817 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 60 221 272 449 863 62 28.0 3e-09 MDIIQTLTIRHLKHNKKRTLSTIAGILTATVLLTMLSVFMTSFVHRLEAADVTQEDVKPL LSAASGMIAVVLAVLVIFLYNMLVISFRDRGRYLGILASVGATPFQRGRIAFVEAVILGS AGIPAGIGIGVLLSAAVFPFHVVLSWRVLLLIFLSECAAVLLTGLACTGRPGKGSVIELI HNRADKRTFKKPVVLPFWTAGRFGAESNLALKNLVFFKRRYLIIGISFAVAMLLFLDGYI YMNYLDGGYETRDRRPKDNADLVLEEDYNKRNEKWDDFISEVISIPAVEGYSIQDRADMG TVLFEAKDIDPGLKEYTSYILGMSYNNPMKISSIKGDVKKGYAMNLVLVGMDDKSFRDYL DKAGVPAEYDAGKGQIPVLVEDHPIVKDGSTTKYRSIFAEGTRGALSLFTDSGQWMYPVA TPEGEQVKQFKKWEFDVLGVTTQTVPCYTASAVEEPNTIYFYTPQDVFDQVVRTDGFPAE NGQTHRRLALKLNSEAPKLPDNVLYPAVVRFGNTTTRGLKLVSSSLSFLADEKMQNTLME RGEEAGKVQNMIEDIGERYGLSDGRNMDIDNFDWSALDYTCNSYAAQITGTMSDPFPLLR HLFSYGVLIFLTVISVFQMIKIITSAVQTRRREFAVFLSLGMSRKQIAKMLYIENLIYTV CAYVAGLIFSILLALALFWSWGREQAVEPVFPYEILLMETAVFLVLSIFSVYLSVRSVKK IQLIDIIKEETM >gi|224461045|gb|GG657759.1| GENE 141 145769 - 146440 322 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 222 1 220 245 128 32 1e-27 MELLKVENVSKIYGTGENEVKALDNVSFTVDKGEFVAIVGPSGSGKSTLLHMLGGVDVPT SGDIWVEGVKLGSMDEKKLSIFRRRQVGLIYQFYNLIPILDVQENISLPLLLDGQKPDAG YLDELIGTLGLSQRLNHLPGQLSGGQQQRVSIGRALVMHPALVLADEPTGNLDRKNSAEI IALLKESNRKYRQTLIVITHDEGIALQSDRILYLEDGRITERN >gi|224461045|gb|GG657759.1| GENE 142 146641 - 147414 525 257 aa, chain + ## HITS:1 COG:CAC3359_2 KEGG:ns NR:ns ## COG: CAC3359_2 COG0778 # Protein_GI_number: 15896602 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 85 256 1 190 191 104 35.0 1e-22 MNKHHVEIDACRCIGCGACVRTCAAHNIELKNKKAETILSDCLMCGQCTAVCPAEAVSIS GYETEDIIKTNNERLDPKQVLDVIRFRRSVRQFQDKKIPGEVIDEILEAGRLTHTAKNKQ DVSFAVLDREKDHIEQMAVSMFRKWKPLADLFSPMARQNKIDRHFFFFKAPIVIVIMAGD KTNGILAAQNMEFAAEANGLGVLFSGFFTMAANSSLKIRKALKMPKKKRAAMTLVLGYPR VKFLRSVQREKLKVTYL >gi|224461045|gb|GG657759.1| GENE 143 147432 - 147776 295 114 aa, chain + ## HITS:1 COG:BS_yvbA KEGG:ns NR:ns ## COG: BS_yvbA COG0640 # Protein_GI_number: 16080432 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 19 93 3 78 90 62 41.0 2e-10 MECEERLKKIVDGFQICRNAFTAIGDDTRQLILLVLLESDLSGIRVGEIAEKTHLTRPSV SHHLKILKESGIVAMHREGTKNYYYLSTDETQWKEIADLVDLIYESIQHMSAQS >gi|224461045|gb|GG657759.1| GENE 144 147800 - 148552 499 250 aa, chain + ## HITS:1 COG:MA4170 KEGG:ns NR:ns ## COG: MA4170 COG1145 # Protein_GI_number: 20092963 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Methanosarcina acetivorans str.C2A # 2 235 12 247 294 78 24.0 2e-14 MILYFSGTGNSEYAAKRISREIHDETVDLFKKIRNHDFTELYSEKPWIIVSPAYAWRIPR ILNEWLGKTTLAGSKEIYFIMTCGGSIGNAGAYLKELCAGRQMDYRGCLPVIMPENYIAM FSTPAEEEALKIIEHAEATIDKAASFIKSKATFPQLSVTVKDKMSSSIVNRIFYPMFVHA KKFHVKDTCISCGKCEALCPLANIRIVDGKPVWGTDCTHCMACICRCPVEAIEYGKHSSG LPRYTCPKLY >gi|224461045|gb|GG657759.1| GENE 145 148771 - 150492 1820 573 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 74 571 1 480 484 163 31.0 1e-39 MANYVPGTYEGIGHGYQGRLIVNVTVTEDEITEVKIIKHKEVRGLAWDLPTSPVEVMPPQ IVKYQSLNIPLVNGADLTSGAILEAVEGALRAAGAADDVIEKLKAAPGPEAPEVKDEVRT VDVAVFGAGAGGLAAAIEAKEGGADVVLIEKQGITGGSTARSGGKLLGAGTKWQKKQGIY DTEEMCYNYLMEVGNRRGNFMDASKNRYLVKNLNSTLDWLGTMGYKVQDVEAIHVSMQPW RVHNSMGGGGQTNGQGGEITTPLTRHFAGRLGGEIIYNTALKELLTDENGVVNGAVCEKL DGSKLTVYAKKGVILATGGYSRNKEMCARYPVAHYFCTAPKSNVGEGLVAAEKIGARNFV HPGIQVVYTSLSCGIGINDESGLIVNERGERVVNEWSYQYHVSDALAASGSNCGWYITSG DEPYGGVQYGFKQAVEGTSRDKAADSIEELAALIKCDPATLRATFDRYQELTARGEDEDF GKPARFLHPIDGPKYAALRLHPCVTVSFGGLETDISARVLDNEGRPIPGLYAAGEVADTG MFGTEYPTCGTSIGGALFYGRIAGRMASGQSML >gi|224461045|gb|GG657759.1| GENE 146 150545 - 151876 1266 443 aa, chain + ## HITS:1 COG:STM0072 KEGG:ns NR:ns ## COG: STM0072 COG1804 # Protein_GI_number: 16763462 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Salmonella typhimurium LT2 # 10 407 7 405 405 238 37.0 2e-62 MEGTGLNNFPQFGVLAGVKILVCGGAIAGPFGATLLGEIGAEVVHLESPKNPDSTRGHYG YSQNHRNQISMVADMKTPEGLEIFKKLIKWTDIFIESSKGGTYEKMGLTDEVLWEVNPGL VIVHVSGFGQTGVPEYISRASYDAVGQAFSGYMSFNGTPKEALKISPYLSDYVTALNTCW TALAAYVHVLRTGRGEAVDVAQYESLARILDTRPIEYFTDGKEFPRTGNKDSQAALFSFY TCKDGGTIFIGMNGYGPVHRGYPLIGLPKPGDGDPEIDQIISGWMADTDLGRRLEAAMEK FVSEHTVDEVEKIMLENQIPCQKVYSLEDCVRDPHWKAREIFTEWDDPMMGRVKGIGIVN KWKNNPGEIKWGAPLFGENNKEVLRDLGYTEEETEDLARRGITACLDFEQTYETYKLGEL FPHYREGFTEHWKTEQEDETYEI >gi|224461045|gb|GG657759.1| GENE 147 151866 - 152675 186 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 263 4 237 242 76 28 6e-12 MRFEGKAIIVTGASSGIGRAAARQFAMEGGRVVAAARRLELLEELKAEVEAAKGAGCILP LQTDVRIPEQIDRMFDVCLERFGHVDVAVNNAGVLDGQLPIHETSQEIYDYVYETNQRAV YLGCQRAIEIFLKQGTPANIVNIASAASVRGLKGGTTYVMTKHAVLGITRNISASFFERG IRCNCILPCNVKSGINRAARELNIGILDWQMRAGNAAPMHTITPHTEGAKPMLGQPEDCA NIITFLADDAAARYISGAEVKVDAGFLNM >gi|224461045|gb|GG657759.1| GENE 148 152911 - 153660 824 249 aa, chain + ## HITS:1 COG:CT237 KEGG:ns NR:ns ## COG: CT237 COG1028 # Protein_GI_number: 15604958 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Chlamydia trachomatis # 3 246 4 246 248 168 40.0 8e-42 MKLVQDKITVITGGTRGIGFTAAKIFIENGAKVSIFGETKEEVDTALAELKELYPEEEVL GFAPDLTSRDAVMAAVRAVAEKYGRLDVMINNAGITMNTVFSRVTEEAFKHMMDINVIGV FNGAWAAYQCMKGAQQGVIINTASVTGIYGSLSGIGYPASKAGVIGLTQGLGREIIRKNI RVVGVAPGVVDTDMTKGLPPEILEDYLKSFPMKRMLKAEEIANVYLFLASDLASGITATT VSVDGAYRP >gi|224461045|gb|GG657759.1| GENE 149 153801 - 154712 862 303 aa, chain - ## HITS:1 COG:CAC3409 KEGG:ns NR:ns ## COG: CAC3409 COG0583 # Protein_GI_number: 15896650 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 293 23 314 319 107 25.0 3e-23 MSIKRLPFFLSAAKYLNFTEAASEQFISQTAMSLQIKKFEDELGFQLFNRSNTGVTLTKA GGYLYKRCQYIMADYNQAVAHARQLSEEDKPQVRIGYSGAYEQLAVTPFVSRFYKGHPSS QVELIYGKRKKKVLQQLEDGFLDLAVVSDYDRNYSQWLKSVPLRHDNCLFLLSSDSELAA SSSLEPSRLVGKPLLRTVENDFTSYEWQIWNVMNFLGLGGNEVIYANDYYSMALLAKSDI GFGIVPACMSTMPMDGLSYVPITGRTLKTSCSVIYMESSSNPVREEFLMTLKDKDTEASD GAD >gi|224461045|gb|GG657759.1| GENE 150 154998 - 157598 2408 866 aa, chain + ## HITS:1 COG:slr1588_2 KEGG:ns NR:ns ## COG: slr1588_2 COG2200 # Protein_GI_number: 16332199 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 299 551 20 272 283 197 38.0 8e-50 MSAKKKILVIEDNAINRMMLCEILAPEYEVLEAENGQTALAMLEQCSEEISLILLDIVMP VMDGHTFLSIVEKTPSYASIPVIVTTQSDSEADEIAALSSGATEFVTKPYRPQAILRRVA SIIRLRETAAIINQFQFDSLTGLYSKEFFYRRVKETLEQNPGKEYDILCSDIENFKLVND IFGVPAGDRLLGSIAAIYTKLVGEKGICGRLHADQFACLMERRYDYADAFFVQADMELGR TSNMRNTVMKWGIYAVEDRTLAVEQMCDRALLAARNIKGQYGKHYSRYDDELRNKMLHEQ AITDIMEEALSEEQFVIYLQPKYSISKDRLAGAEALVRWEHPEWGFQSPAAFIPLFERNG FITKLDQYVWKKTCAVMQEWDRKGYPQIPVSVNVSRADVYQVDLAEVLMETVRRYGIAPS RLHLEITESAYTEDPEQIIDTVRHLRKLGFIIEMDDFGSGYSSLNMLNQLPLDILKLDMK FIQSETAKPIDKGILGFIMGLARWMKLSVVAEGVETREQLERLREIGCDFVQGYYFARPM PCTDFEALLKRLDTEVCENETQAGGGQESDAAQSYILIAEEDEEQRRELRKLFQGRYQIA EAATGQEALGFIVRFERELSAVVLSLTLPELDGFSILDVLQREKAVWNIPVIATGQPDIT LEERAVELGADDFAYKPYSAGMLERRLIHAMRRTLSREREQALQEEAGRDFLTGLLNRRG LNASARLVRKEDAPMAVYLFDLDDLKQINDTYGHEYGDRLIKKFGTLLSERTRSCDILAR FGGDEFIAVIKQMDSRASALKKGEEICSAFREGELTEQFATSCTGGVAIWDADIPIANII VEADKALYWAKRSRKGGCCLQRGSDI >gi|224461045|gb|GG657759.1| GENE 151 157595 - 161179 3102 1194 aa, chain + ## HITS:1 COG:VC1349_3 KEGG:ns NR:ns ## COG: VC1349_3 COG0642 # Protein_GI_number: 15641361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Vibrio cholerae # 661 913 1 250 260 183 40.0 2e-45 MITQLTALETVEKFCHSWFELRDLELTLSFLSENVSFVGSGEGESAWGKEAMADYIRQDI AEIPEPFSCHISVIYEQTPAGNVRNLSMEITLKNTMYTWYLRGFYTLVLEDSRWKVFSIH VAEPSRNQAGGEHYPQTLVVEHIAQQRQKLLNDSVPGGMMGGYIEEGFPFYFINHNMLDY LGYENEEEFCLDIDGMIANCMHPDDRDMVDTEVAAQLEKGGEYAVDYRMKKKDGSYIWVH DSGRKTVAEDGRDAIASVCVDITAQKTAQEEVLHLYNNIPGGVFRCRFDDDLSVIGANDG LYEFLGYGREEFAAMGNKMSAVIHPDDLGPISGNLTEQLKHSNAIHYENRVICKDGTVRW VSVKAQLFAEQNGERHFYCVLVDNTKEKRLQERANELYEQEMTYFAELSSRDGAFQGRIN VTQNKLENYISTANVAVSRAGDSYEQTVEHLACSAVDPHYGQKLRETLKRDKVLEDYAAG KADYNFSFLCRRKDGTAFWSGSNFHTCLNPETGDVMMFFYTQDITEQRLQDQLLKKITKL DYDLITEIDITTSTYRLVGFSDEWKQAVLQQGDFQQEIRRIAESRMNEEARKVFLEKLDF EYMKSCLARQNSYTFILELTEDRGTRVKRFQVFYINEELGRVCMTWSDVTDVVRQEQRQK EELAAALVAAEQANVAKSDFLSRMSHEIRTPMNAIIGMSTIAAQSIGDDEQIEDCISKIG ISSRFLLSLINDILDMSRIESGKMLLKSERIPTEEFLNGINSICYSQAAVKNVDYECIID PVLADYYVGDAMKLQQVLINILSNAIKFTGEGGKVTFSAAERRKTKTDAVLRFIVNDTGV GMNEDFLPHIFEPFSQESTGTTALYGGTGLGLAISKNIVDLMDGKITVRSIKGIGTEFTV DVKVGISEEEKLRHHQKKQNYNFAHLKTLVVDDDVAVCESAVVTLREMGITAEWIDSGRK AIDRVKMLWGEGRYYDMILIDWKMPEMDGLETARRIRSIVGPEVTIIIMTAYDWVSIEHE AKLAGVNMLMSKPMFKSSLISAFTKALGDKEEQSQRPEPEDFDFTGKRVLLAEDNAINTE VAVMLLESKGFQVETAENGLRALEMFSKSETGYYDAILMDIRMPIMDGLTTASNIRHLSN SDAGNIPIIAMTANAFDDDIEKSKAAGMDAHLAKPIDPGRMYQTLYDFIYDKED >gi|224461045|gb|GG657759.1| GENE 152 161184 - 161549 500 121 aa, chain + ## HITS:1 COG:no KEGG:ELI_3416 NR:ns ## KEGG: ELI_3416 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 118 1 117 117 131 57.0 8e-30 MDEVQEIMKSYGMDGEATMRRFMGNTKLYIKLLDMLPADNSIHELDDALSAGDLDKAFEA AHTLKGVAGNLGLSPLYDAVCVIVEPLRKREAMDGYPALFGAVQKEFKNALAMLEALKNY G >gi|224461045|gb|GG657759.1| GENE 153 161576 - 162973 1208 465 aa, chain + ## HITS:1 COG:SA0323 KEGG:ns NR:ns ## COG: SA0323 COG0534 # Protein_GI_number: 15926036 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Staphylococcus aureus N315 # 4 442 3 434 451 197 32.0 5e-50 MADDQKILLFEKLPIPKAVMQLSVPTVLSSLVMVIYNLADTYFVGMMNDPVQNAAVTLAA PVLLAFNAVNNLFGVGSSSMMSRALGSRDYDKVGRSSAFGFYCSLIAGLLFSFLCFSFRG PLLRVLGADPSTVAATLEYLRWTVMCGAAPAILNVVMAYMVRAEGASLHASIGTMSGCLL NIILDPVFILPWGLNMGAAGAGLATFLSNCAACCYFFVLLYVRRKKTVVCISPRKFGFRK EIVLGVCGVGVPAAIQNLLNVTGMTILNNFTAPFGAHAVAAMGIAQKVNMVPLQVAIGFS QGVMPLISYNYASKNRERMKASIMFTIRTIVPLMVVVSVLFSAGAGPIISAFMKNEDIIA YGTRFLRGACLCLPFLCMDFIAVGVFQALGHGRKALVFAILRKILLEIPALYVLNFLFPL YGLPYAQFVAEFVLSIASVVMLNRIFKSEGRPAGQKDTGEQESLN >gi|224461045|gb|GG657759.1| GENE 154 162979 - 164037 1002 352 aa, chain - ## HITS:1 COG:CAP0080 KEGG:ns NR:ns ## COG: CAP0080 COG0582 # Protein_GI_number: 15004784 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Clostridium acetobutylicum # 42 345 19 306 323 112 28.0 1e-24 MAESKSYHEQTQINQTLRLREVLKTLPPFARDYFRAMEPKSSAKTRINYAYDIRVFFHFL MEANPNYKNHTISQFDVSDLEKLEPVDIEEYMEYLKVYRHEDELITNSEKGLSRKMSALR SFYSYYFKHQIITKNPTLLVDMPKLHDKAIIRLDADEVALLLDYVETCGSKLSGQALTYY HKTKDRDLAILTLLLGTGIRVSECVGLDLTDVDFKNNGITVTRKGGNQMVVYFGEEVEKA LLTYINGDRKAATPLSGHENALFLSTQRRRMGIQAMENMVKKYARQVTPNKKITPHKLRS TYGTSLYKETGDIYLVADVLGHKDVNTTKKHYAAIDEDRRRKAASAVKLRES >gi|224461045|gb|GG657759.1| GENE 155 164382 - 164741 357 119 aa, chain - ## HITS:1 COG:no KEGG:Closa_2009 NR:ns ## KEGG: Closa_2009 # Name: not_defined # Def: Peptidoglycan-binding lysin domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 29 114 5 95 104 73 39.0 2e-12 MRAHRSYAAGKRRRQVYMKKLAVVVSALVLVLCMSILLGCNFADAHGSTDEAPVEHRYYK SIEIQSGDTLWGIAEEYMNEKDGSIIEYIDEVKEINGLKSDDIQDSQYLTIAYYDTAFR >gi|224461045|gb|GG657759.1| GENE 156 164942 - 165559 669 205 aa, chain + ## HITS:1 COG:BS_lexA KEGG:ns NR:ns ## COG: BS_lexA COG1974 # Protein_GI_number: 16078848 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Bacillus subtilis # 5 202 3 202 205 226 58.0 2e-59 MAQGKISPKQQEILEYIKAQILERGFPPAVRDICEAVHLKSTSSVHSHLETLEKNGYIRR DPTKPRAIEILDDSFNFTRREMVNVPILGRVAAGEPILAEQNIENYFPIPMEYMPNKQTF MLKVKGESMINAGILDGDYVLVEERKTARNGEMVVALVDDGATVKTFYKEEGIIRLQPQN DTMDPIIVRDVQILGKVIGVFRFFD >gi|224461045|gb|GG657759.1| GENE 157 165653 - 166756 889 367 aa, chain - ## HITS:1 COG:no KEGG:CD1890 NR:ns ## KEGG: CD1890 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 101 366 153 412 413 107 27.0 8e-22 MGQLFRFEFGKLIHKKLILAAVAAYTLVMIILLLNQRIDYLEVKTADGTTYHGRKAAAYE KTIADKYRGELNADKVNDILKAAIDSGSPEELSYKGDWVTKSISSMFVWESWDKVKPLTE EDIESAYPQIKEQPFQIGYTRGWETAMLCMESMLLIAGFLIVITVAPVFSEEYSSGMDAL LLTSKKGKSTCIRAKITASVCFSVLLALFTIALPAGAIFIQYGVKGWDATVQAAAHGLFW TVPRTLSCLQAMILVIIFAVIGAVLLTCITLLISALSKNAFTAVLVALLLYIVPIILIDK LDILPLNQFLSIMPSGDFNAALVLGMEDMRLGGLRIPMSYLNIFLTIVMGLTAWKGCRNI FGGHQVT >gi|224461045|gb|GG657759.1| GENE 158 166734 - 167630 951 298 aa, chain - ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 3 285 2 286 294 207 38.0 1e-53 MELQLEQITKRYGAKLAVDQLSMCLTPGIYGLLGANGAGKTTLMRLICDILAPTSGSIYY CRQDIHMMGEDYRGILGYLPQKFGYYPEFTALKFLLYMAALKGLNKMTAAERSMELLELT GLLSEKDRKIKTFSGGMQRRLGIAQAMLNDPKILVLDEPTSGLDPKERVRFRNLISSFSK DKIVLLSTHIVADIEYIADKIFIMKEGRFIKTGTLEEITSDIRDFVWECEVSASRAAKME EAYTVVNVKSRGDRTVLRIVSEEKPAEEAVKAEAALEDIYLYYFSGKGEDAYGTAVSL >gi|224461045|gb|GG657759.1| GENE 159 167615 - 168403 401 262 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225567996|ref|ZP_03777021.1| ## NR: gi|225567996|ref|ZP_03777021.1| hypothetical protein CLOHYLEM_04069 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04069 [Clostridium hylemonae DSM 15053] # 1 262 1 262 262 483 100.0 1e-135 MTLSKKEKELQTLLEAYSPPDISSGRKNAALYKLKTEAGKEHKKEKTPFWLRLKIQLAYI PASLWLTESFLLIFGLWICVHAPHSNGLTTLSVASPVLGVTVFPVLARSFSEGMWELEQS SRYNLKDICCMRLLIFGLADTFILAVLSAAIVKTGTAPYSCLLRVVVPFTVSCSVYMYLI RRIRNSSVNYILVCAGIFLCLVCLYMQKYYVLLEEILSGIQTTAVTAAALAASMILLSVQ VYLYVRFIGQKGKGWDELWNYN >gi|224461045|gb|GG657759.1| GENE 160 168400 - 168603 112 67 aa, chain - ## HITS:1 COG:no KEGG:Amet_2000 NR:ns ## KEGG: Amet_2000 # Name: not_defined # Def: ECF subfamily RNA polymerase sigma-24 factor # Organism: A.metalliredigens # Pathway: not_defined # 2 66 72 136 139 62 43.0 5e-09 MESGQVIRAALEKLPRMQRDVVILRFYHQLSIQEIATITDSSIPTVKSRLRQSMDKLRKL LDEEEFN >gi|224461045|gb|GG657759.1| GENE 161 169096 - 169449 470 117 aa, chain - ## HITS:1 COG:BH1328 KEGG:ns NR:ns ## COG: BH1328 COG0799 # Protein_GI_number: 15613891 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Bacillus halodurans # 6 114 5 113 117 97 38.0 4e-21 MEHAMEMARIAYDALSDKKGENIQIIDISGVSVLADYFIITDGTSDSQIKALVENVDEKM TKAGYTLRQQEGLSSGSWVLMDYGDIIVHVFEKENRAFYNLERIWSDGTPVEREKLN >gi|224461045|gb|GG657759.1| GENE 162 169455 - 170042 568 195 aa, chain - ## HITS:1 COG:BS_yqeK KEGG:ns NR:ns ## COG: BS_yqeK COG1713 # Protein_GI_number: 16079617 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Bacillus subtilis # 12 185 10 181 186 132 40.0 5e-31 MKQKISRIRRRIKADLDRERYEHTLGVMYTAAAMAMRYDEDIDQALMAGLLHDCAKCIAP DTKIKLCDRYHLSVSDIELANPSLLHAKLGAYLAAKKFHIRDKDVIDAIASHTTGRPHMT LLEKIIYISDYIEPGREELPNMAAVRKLAFSDIDECLYRILKDSLVYLDSKNMPIDPMTE KAYQYYKEKLGKKEE >gi|224461045|gb|GG657759.1| GENE 163 170044 - 170655 516 203 aa, chain - ## HITS:1 COG:CAC1262 KEGG:ns NR:ns ## COG: CAC1262 COG1057 # Protein_GI_number: 15894544 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Clostridium acetobutylicum # 2 200 3 199 200 140 37.0 2e-33 MKIGIMGGTFDPIHNGHLMLGEAAYELFRLDEVWFMPNGNPPHKRRSSIESDVEDRVEMV RLAIEGHDNFKLQQYESRKKEVSYSCDTMEHFSSVYENCEFFFIIGADSLFAIESWVHPE RLFPTCTILAAYRDDIDTKEEMCGQINYLRDKYDARIELLATPLMNVSSSGLRMRLKQNG DIRAMVPDKVRAYIKKHHLYKEV >gi|224461045|gb|GG657759.1| GENE 164 170697 - 170987 223 96 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Anoxybacillus flavithermus WK1] # 1 96 2 96 97 90 46 3e-16 MTTKQRAYLKSLAMTMDPVFQVGKNSITPEVTEAVREALAARELIKVAVLKNCADDPKEI AQLLAERTQSQVVQVIGKKIVLYREGKDKNKRIELP >gi|224461045|gb|GG657759.1| GENE 165 171006 - 172292 1632 428 aa, chain - ## HITS:1 COG:CAC1260 KEGG:ns NR:ns ## COG: CAC1260 COG0536 # Protein_GI_number: 15894542 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Clostridium acetobutylicum # 1 428 1 424 424 414 51.0 1e-115 MFADRAKIFIRSGKGGDGHVSFRRELYVPNGGPDGGDGGRGGDVIFEVDEGLNTLQDYRH RRKYAANDGEQGGKRRCHGADADDIVLKVPEGTVIKEAESGKVIADMSGDNKRQVVLKGG KGGLGNQHFATATMQIPKYAQPGQPSQELWVNLELKVIADVGLIGFPNVGKSTFLSRVTN ARPKIANYHFTTLNPNLGVVDLDGAQGFVIADIPGLIEGASEGVGLGHEFLRHIERTKMM IHVVDAAGSEGRSPVEDVYKINAELEAYNPDIAKRPQVIAANKTDLIYSGDSEDPVKLLK EEFEPKGIRVFAISGATGDGISELLYYVSEQLGKLDRSPVIFEQEYFPENELIYENLPYT VEKEDDMYVVEGPKIEKMLGYTNLDSEKGFAFFQKFLKDSGILDELEEAGIQEGDTVRMY GLQFDYYK >gi|224461045|gb|GG657759.1| GENE 166 172473 - 172757 446 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240144150|ref|ZP_04742751.1| 50S ribosomal protein L27 [Roseburia intestinalis L1-82] # 1 94 1 94 94 176 88 5e-42 MMKLNLQFFAHKKGVGSTKNGRDSESKRLGAKRADGQFVKAGNILYRQRGTKIHPGVNVG RGGDDTLFALADGVVRFERKGRDKKQVSIYPAAQ >gi|224461045|gb|GG657759.1| GENE 167 172762 - 173094 282 110 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1694 NR:ns ## KEGG: EUBREC_1694 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 110 1 109 109 79 38.0 4e-14 MIKVTIYNNEKNECVGFKASGHAGQNESGQDIVCAAASILMINTVNAIEQYTGDKFSLET EESSGSMECMLAEYPSKEAELLLKTMVQGLTAMEDDEDYTRYIDIIFEEV >gi|224461045|gb|GG657759.1| GENE 168 173109 - 173417 418 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|160880683|ref|YP_001559651.1| ribosomal protein L21 [Clostridium phytofermentans ISDg] # 1 102 1 102 102 165 80 8e-39 MYAIIATGGKQYKVAEGDIIKVEKLGAEAGETYTFDQVLAVNDNGLKVGNPTVEGATVEA SVVENGKAKKVIVYKYKRKSGYHKKNGHRQQYTAVKIDKINA >gi|224461045|gb|GG657759.1| GENE 169 173573 - 176260 2262 895 aa, chain - ## HITS:1 COG:MT1217 KEGG:ns NR:ns ## COG: MT1217 COG1061 # Protein_GI_number: 15840623 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Mycobacterium tuberculosis CDC1551 # 10 615 12 630 701 180 29.0 1e-44 MNIFDGVLEFKGIWRDYQERVLHHSEAYMSDNKVHIVAAPGSGKTTLGIELIRRLGNPCL ILSPSITIRQQWIARLEEGFLTEGEDAEKWFSNDIRKAKPITAITYQALYSSMKQYTGLL EDSEEESEEKNTEMVDYKNFDIYEVIRENGIRTLCLDEAHHLRSEWWRALEEFLKNVTDV KLVSLTATPPYDSTPAQWKRYIDLCGPIDEEIFTPELVKEGSLCPHQDYVYFNQPAKEEL EAVKGYTQQAEAFVRELIQDREFQAMISAHEGLQAPEEYGEKFLDNPRYFSSILIFLQEM GIPFSPYLKKLTGTKGHLPSLDNTWLEVLLQGFLYDDAAAYPSDTVYREGLIARLKEAGC MYRRKVRLVRNEEINRLLIKSRGKLNSIREIVKSEYAGMGNGLRLLILCDFIKKEYLSKV GGTEAFTGEIGAVPIFEYVRRAGIEGLRLGVLSGSVIIVPMDVEDELMGLLDVYGLQGAL AELEDTGYGSLTVKGSSHNIVAVITELFTRGSIHVLAGTKSLLGEGWDSPCINSLILATY VGSFMLSNQMRGRAIRTCKEQPDKTSNIWHLACILPGRITYNSEEAPAGDYDTLVRRFGA FLGISYKEDVIESGIERLGLDRYLNVENDFKSINKNMLARSRKRDELRRSWEKSLKVIHD DMCVEEIREVDKQILAPGYLFLNAVVMEIVSCVWMLLLLFFRIFITAGLEHASFWFTAAG VLFLAAAAFAGKYGFRIFRLCTPQKRMKRAAEGILDALVQTGKIEEPQHCRSEVKEEEIL VLACLKGGTTRDKTLFAECLAQFWGVIDNPRYILARKKWRGKISDCYAVPEIFGRNKEDA MTFRMCMKRVLGNYEAIYTRTPEGRRLLLKARLRSFACKNDRILNGRKQVKGKYE >gi|224461045|gb|GG657759.1| GENE 170 176300 - 177184 950 294 aa, chain - ## HITS:1 COG:PAB2381 KEGG:ns NR:ns ## COG: PAB2381 COG0697 # Protein_GI_number: 14521649 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus abyssi # 25 279 23 265 280 86 28.0 6e-17 MKQRSSLFYGSLILTQNILLGVGNPIAKYGMSSFPFFLYVAVRFLMGSLFLILLFHKKIF KGMKTSFWMPGTLIAALNAGAYILGTLTFKYTTATSAGFLFALPVIFTPFLMRFISKVKI EKKKYIPICIVVAGTYLLCCGSGGFVFGPGEAMAVTSSFLVACVFEFSSHYLEHMEPLLL AAYQSGFTGVVCLVLGIANNEVMPAFTGVPAAAWGALVYLGIGCTGISYCLQNFALSKID STKAALIMCSQPVFTTAASFVLLGERMAGLQTAGAVIIMGGIIYANVMPESKPC >gi|224461045|gb|GG657759.1| GENE 171 177220 - 178263 955 347 aa, chain - ## HITS:1 COG:TP0053 KEGG:ns NR:ns ## COG: TP0053 COG0208 # Protein_GI_number: 15639047 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Treponema pallidum # 4 347 8 351 351 548 75.0 1e-156 MAELIKKMLFNPDGDTDVRSRRMIGGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEIS LGVDIKDYPRLPAEERRAYDKILSFLIFLDSIQTANLPHIGEYITANEINLCLSIQTFQE AVHSQSYSYMLDTICEPQKREEILYQWKEDEHLLLRNEFIGSLYNEFQETKSARSLVRTL IANYILEGVYFYSGFMFFYNLGRNQKMPGSVQEIRYINRDENTHLWLFRSMLQELKKEEP QLFAAEDIKMYRQMIREGCEQEIRWGHYVIGDKIQGLTKDMITSYIRYLGNLRCTGLGFE RIYEGYDTIPESMRWVEQYSNANLIKTDFFEAKSTAYAKSSALVDDL >gi|224461045|gb|GG657759.1| GENE 172 178291 - 180516 2035 741 aa, chain - ## HITS:1 COG:TP1008 KEGG:ns NR:ns ## COG: TP1008 COG0209 # Protein_GI_number: 15639992 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Treponema pallidum # 12 741 116 845 845 1043 65.0 0 MEDIKIKGLNQVLAHIQGDFKEPEYDLAQLYQKYASLQKPGLTDKEQLSLLTKAAVELTT QEAPGWEMIAARLLYAGFRDSLEDAMKSRGIRSFYEKIVYLTKENLYGSYILEHYSRQEI EAFAKLIEEDRSRLFTYSGLDLLLNRYVIRTRKGVILETPQEMFMGISMHLAMKEKENRS EWVKRFYGMLSLLKVTMATPTLSNARKPYHQLSSCFIDTVPDSLDGIYRSIDSFAKVSKY GGGMGMYFGKVRAGGSAIRGFEGAAGGVIRWIKLANDTAVAVDQLGVRQGAVAVYLDVWH RDLPEFLKLRTNNGDDRMKAHDVFPAVCYPDYFWKMARDHIEGDWYLMCPHEVLTVKGYA LEDCYGKEWEEKYLDCVADERISKRVLPIKEIIRLIIRSAVETGTPFVFNRDEVNRMNPN GHKGIIYCSNLCTEIAQNMGAVEEVRQSIETVDGETVVVTVTKPGEFVVCNLASVSLGHI DVSDEKEIYRTVSSAMRALDNVIDLNFFPVPYAKLNNEKYRPVGLGVSGYHHMLAKHGIQ WESEEHLAFADKVFDTLHRAAIAASCDIAEEKGVYACFEGSDWQTGAYFDKRKLTGAAWE QLRARAASCGVRNGYMLAAAPTSSTSIIAGTTAGLDPVMHRFYLEEKKNGLVPRVAPELS MDTFWYYKNAHLIDQTWSVRACGVRQRHIDQAQSMNLYITNEYTFRNVLDLYLLAWECGV KTVYYIRSRSLEVEECDVCSS >gi|224461045|gb|GG657759.1| GENE 173 180717 - 181727 935 336 aa, chain + ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 10 336 3 327 327 413 64.0 1e-115 MEHLITPDNYTSPLTIRETEVAIKEVKDHFERALAKSLHLTRVSAPLFVKPESGLNDNLN GVERPVSFGIREQEDAPAEIVHSLAKWKRYALKRYDFHSGEGLYTDMSAIRRDEDTDNIH SIYVDQWDWEKVISKEERNTETLQYTVRKVYSALKETEEFMSRRYNYIEPFLPDEITFIT SQELEDLYPGADAKEREYRIARAKGAVFISQIGKVLSSGEKHDGRAPDYDDWELNGDIIV YYPVLDIALELSSMGIRVDEEALRRQLKAAGCEDRAELEFQRLLLNGQLPYTIGGGIGQS RICMLYLRKAHIGEVQSSIWPKEMLEEASSHNINLL >gi|224461045|gb|GG657759.1| GENE 174 182137 - 183036 878 299 aa, chain - ## HITS:1 COG:MA3243 KEGG:ns NR:ns ## COG: MA3243 COG0697 # Protein_GI_number: 20092059 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Methanosarcina acetivorans str.C2A # 1 268 1 269 291 163 39.0 4e-40 MKRLAPVFVLMASVLWGSMGIITRYVAAIGFNTRQTAAVRITSAAVVLILFLLITDRNKL KIDKKDLKWFLGTGLGSLFINNLAYAATVQRASLSVAVVLLYTAPFFVMIMSVIFFKEKL TVQKIAALFLSFAGCILVVGLSGANVGDNALVTLLIGLSAGFGYSLYSIFGKVLMGKYES LTVTVYTFILASIASLLIAQPLSMGRIIASNASKMPVTVIGSVITLALPYICYSTALKYI ESSKASIIASFEVVAASLFGVVLYRETLDLFNLVGIICVVAALVILQLNPKKSQRDQNE >gi|224461045|gb|GG657759.1| GENE 175 183062 - 183853 1042 263 aa, chain - ## HITS:1 COG:MK0426 KEGG:ns NR:ns ## COG: MK0426 COG2159 # Protein_GI_number: 20093864 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Methanopyrus kandleri AV19 # 1 263 1 243 243 75 27.0 8e-14 MTIDFHTHMFPDKIAAGTLDFLGSVCHIKPYTDGTYEGLKASGKAAGVDLSVALPIVTKP SQFASINRFASEHQNGSILSFGSVHPDSENYKEQLRQIKDMGIKGIKIHPDYQEVYFNDI RYKRIVEYASELGFIISVHAGKDPKCPDDVHCTPQMAAELIREVQPEKLVLAHLGGNFQW DEVEECLVGKHVYFDTGVVFGRISDEQFIRIVRTHGADRILFATDSPWAGQKEFVDYLKS MDLTDEEKNSILGENAQRLLDLQ >gi|224461045|gb|GG657759.1| GENE 176 183912 - 184328 513 138 aa, chain - ## HITS:1 COG:CAC3674 KEGG:ns NR:ns ## COG: CAC3674 COG0517 # Protein_GI_number: 15896906 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Clostridium acetobutylicum # 1 132 1 132 140 140 50.0 9e-34 MNILFFLKPKSELAYIYDYHTLRQALEIMEYHKYSSVPILNRDGKYVGSITEGDLLWGLK RLDLMNLHDAEDISIMKIDRRLDYQCVNAESNMEDLIGRAMEQNFVPVVDDEEHFIGIIT RRDIIGYCYNKLSDCDKR >gi|224461045|gb|GG657759.1| GENE 177 184350 - 185069 699 239 aa, chain - ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 1 234 202 436 437 282 56.0 4e-76 MYENWTDVSGFLIADPRIIRNPKAIDVITYRELRELSYMGATVLHEDAIFPVRKEGIPIN IRNTNIPEDKGTLIVEGTCRKPRFTITGIAGKKDFASITIEKAMMNSEVGFCKKVLEVFE DNDISIEHMPSGIDTMTIFVHQDEFEEKEQKVIAGIHRAVEPDFLELESDLALIAVVGRG MRATRGTSGRIFSALAHANVNVKMIDQGSSELNIIIGVRNHDFEAAVRALYDIFVTTQI >gi|224461045|gb|GG657759.1| GENE 178 185219 - 185770 532 183 aa, chain - ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 4 182 5 183 437 163 46.0 2e-40 MKKVVKFGGSSLASAAQFEKAGTIIKKDDSRRYVVPSAPGKRTPNDTKVTDMLYSCYGQA IIEEEFEEQLKEIKARYKGIIKGLKLDLSLDAEFKIIEENFSKKVGRDYAASRGEYLNGI IMAAYLGYEFIDAAEIIVFDEAGEFDAFSTDKLLSERLAETERAVIPGFYGAMPNGKIKT LAS >gi|224461045|gb|GG657759.1| GENE 179 185832 - 186437 496 201 aa, chain - ## HITS:1 COG:CAC3581 KEGG:ns NR:ns ## COG: CAC3581 COG1011 # Protein_GI_number: 15896815 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Clostridium acetobutylicum # 8 197 2 191 201 113 33.0 3e-25 MEYLGKNIDTVILDIGNVLIDFAWDRYLASFRYSPDMYEKVADAMFRNEDWNMGDSGLIT TEKWLELFIENAPDAEPQIREVFAHFGRSILPYSFTEQWIQYFKDQGVRLYYLSNYSAEM YRQSKDQLSFLNMLDGGIFSWKEQMMKPDPAIYSLLLKRYDIEPQEALFFDDCLENVEAA QKSGINGVLFTTDIPLRMLGK >gi|224461045|gb|GG657759.1| GENE 180 186475 - 186957 484 160 aa, chain - ## HITS:1 COG:BS_yjdI KEGG:ns NR:ns ## COG: BS_yjdI COG2606 # Protein_GI_number: 16078271 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 158 1 159 159 162 51.0 3e-40 MGKKEVKTNAMRILDRMKISYEYDTYECDEFVDGLQVADMLGTDRSLVYKTLVTVGKSGG FYVFVIPIEAEIDFKKAARVVGEKSLEMLHLKDLTKVTGYIRGGCTAIGMKKQYPTVIQE SAQSLSHMYVSGGKLGMQLKLAPEDLRRAADASYADVIHE >gi|224461045|gb|GG657759.1| GENE 181 187042 - 187959 264 305 aa, chain - ## HITS:1 COG:CAC3492 KEGG:ns NR:ns ## COG: CAC3492 COG1533 # Protein_GI_number: 15896729 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Clostridium acetobutylicum # 23 287 10 273 290 215 40.0 1e-55 MKIMEYIPAKTIVTRMKKPGEWFGADYNMNIYKGCCHGCIYCDSRSDCYGIDRFDEVRAK ENALQIIRDDLRRKTKKGVIATGAMSDPYNPYEKELMLTRHALELCDAFEFGVTIATKST LLMRDIDILESIREHSPVLCKVTITTAGDALSSKIEPGAPVSSSRFDMLGELSGRRIPAG ILLMPVLPFLEDSDDNIRAIVRRAAQCGARFIYPAFGVTLRNNQRQWYLQKLDQLFPGEK LSEKYNKRYGTYYECRSPRAGKLWTCFKEECEKNEILYSMKDIIHNYKAPYKCEQLSLFD DNQFT >gi|224461045|gb|GG657759.1| GENE 182 188086 - 188829 147 247 aa, chain + ## HITS:1 COG:RSc2966 KEGG:ns NR:ns ## COG: RSc2966 COG1943 # Protein_GI_number: 17547685 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 145 1 146 241 73 26.0 3e-13 MPRKPRMRSSTDMYHITNRGINKVNIFNSENDKKQFLRILHKTCKQYPIEIYSYCVMSNH FHLLLRIPFAELSAFIQQISTTYAVYYNFKYNRVGHVFQGRYHSETVESERYFWCCVRYI HLNPVHASLAPSPAHYKFSSMKEYLKKSRLLLHPKAFQLYIQNFPGAADFQQFHNNRDHF IYIDTPEELFARKELLIDECAKIFLAGKNLPSKEAIFWSPELKKEFITYASDNLKVSKAE VSRYVKF >gi|224461045|gb|GG657759.1| GENE 183 188881 - 189588 728 235 aa, chain - ## HITS:1 COG:CAC1255 KEGG:ns NR:ns ## COG: CAC1255 COG5011 # Protein_GI_number: 15894537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 230 1 233 238 130 35.0 1e-30 MKARIKFRKFGVMKFIGHLDVMRYFQKAMRRAEIPIAFTSGYSPHMVMSFAQPLGIGITS DAEYFDIELTGNISPDDAVSQLNSVMVEGIEVVSFVRIADDKKSSGMTIVAAAGYQVTLP ETFRTSEVTKKLPESWAEQAESFMDQEQIVVWKKTKRSEKEVDIKPMIYELKVSEDSIYL LLATGSEQNLKPDLVMEAFGTYMGLDMAEIPVHYHRLEVYARKDSQLVPLDALEI >gi|224461045|gb|GG657759.1| GENE 184 189563 - 191437 1592 624 aa, chain - ## HITS:1 COG:CAC1254 KEGG:ns NR:ns ## COG: CAC1254 COG1032 # Protein_GI_number: 15894536 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 8 618 6 614 622 678 51.0 0 MRKLALRDDILLKIEKPARYIGNEVNSVIKDVSKVEIRFAMCFPDVYEIGMSHLGIQILY DMFNRREDVWCERVYSPWTDLDHIMRSEQIPLFALESQDDIKEFDFLGITIQYEMCYTNI LQILELSGLALKAKERGEEGPIVIGGGPCTYNPEPLAPFFDLFYMGEGETVYDELLDVYK DIKQRGGSKKEFLEAAAGIEGIYVPSFYDVSYNDDGTIASFVPNNVHAKAKIKKQAAMDV TAIPYPEAPVVPFIKATQDRVVLEIQRGCIRGCRFCQAGMLYRPTRERDVNVLKEYAYKM LKSTGHEEISLSSLSSSDYSCLQELVAFLIDEFKGKGINISLPSLRIDAFSLDVMSKVQD IRKSSLTFAPEAGSQRMRDVINKGLSQEDIISGAGQAFEGGWSKVKLYFMLGLPTETEED MKEIAVLADKVARRYYEIPKEERSGKCQITASSSFFIPKPFTPFQWAKMYTNEEYISRAA TVKRAFNDQLNRKSLRYHWHDAEVTVLEGVFARGDRRTAAVVEEAYRLGCLYDSWSEHFD NAKWMQAFDNTGVDIAFYNQRERSLEEVFPWDFIDIGVTKEFLIKEWKRAMDGEVTLNCR QKCSGCGAAIWGGGVCVESKNQVS >gi|224461045|gb|GG657759.1| GENE 185 191559 - 192272 292 237 aa, chain - ## HITS:1 COG:no KEGG:MGAS2096_Spy1117 NR:ns ## KEGG: MGAS2096_Spy1117 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS2096 # Pathway: not_defined # 1 225 1 228 235 115 32.0 2e-24 MCTSIISNKKKTIIGWNLDISDMDHKVVAEDDKVYIAINDKTEGWLPLFGANARGDFVAM PTCWPFDDRSNPVNEDCHNIITLDIDLLLGKKTLNEIKDIVEREPVYSVPGVTFQSQLSD KDGNVLRIIPGQGYQYFSKPEYAVLTNFSPFKGDTEQHPWMGWDRYNKAAEMLENKKDDL NVSDCFAILKATAQTVCPTVVSMVFDASDNMVYWCEDQEWDRVQKKKLLYLSTVYLS >gi|224461045|gb|GG657759.1| GENE 186 192338 - 192991 331 217 aa, chain - ## HITS:1 COG:no KEGG:ELI_2369 NR:ns ## KEGG: ELI_2369 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 215 1 215 218 310 68.0 3e-83 MKYTFTEKLLRQGNRYFIKIPFNIWEECGQKGLVPVKVSVEDHKFECRLIPKGAGNYYIP VKKSVVNKIDSNHETGVCFEVINGLTRINHDSPYTKEDPIRKIDGIRHITYPKNGYCGQI CIAMLTGLSVDEIVEIMQAGAWQCSFSKLIETLDYFGISHEGKIIYTKGKEVTLPDCCIV NVKSEQKNHFSLFYKGRYYDTVGIDTNKVIGYLRIII >gi|224461045|gb|GG657759.1| GENE 187 192997 - 193173 160 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568028|ref|ZP_03777053.1| ## NR: gi|225568028|ref|ZP_03777053.1| hypothetical protein CLOHYLEM_04101 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04101 [Clostridium hylemonae DSM 15053] # 1 58 1 58 58 75 100.0 1e-12 MKKIQSASIIILIVSLIIMGVNTFLVSLADWIIRADGIVMLIGIFSFIYSTVKCRKGN >gi|224461045|gb|GG657759.1| GENE 188 193219 - 193650 391 143 aa, chain - ## HITS:1 COG:MA0108 KEGG:ns NR:ns ## COG: MA0108 COG0346 # Protein_GI_number: 20089007 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Methanosarcina acetivorans str.C2A # 3 142 21 163 163 120 41.0 1e-27 MTDMDKSVQFYKKVLGLHVIMDFGANKTLTGGLSLQTAETWKDFTGRSDISFGTNNAEVY FEEDNFDTFAEKLEKLDVEYVHSVKEHSWGQRVVRIYDPDRHIIEVGENIKVVCKRFSDS GMTPEQVAERMDVPVKFVNACLR >gi|224461045|gb|GG657759.1| GENE 189 193674 - 194258 245 194 aa, chain - ## HITS:1 COG:no KEGG:ELI_1484 NR:ns ## KEGG: ELI_1484 # Name: not_defined # Def: hypothetical cytosolic protein # Organism: E.limosum # Pathway: not_defined # 1 192 1 193 204 259 68.0 3e-68 MNERPALDRELDSKTFRDFYYLKEELVDFCRKNGLPASGGKIEITDRIAYFLDTGKIQSP SSSRKRAAEITDIQEDTEIEPDFVCSERHRAFFKEQIGNRFTFNVAFQKWLKNNAGKTYK EAVAAYEQILEDKKKGKTKIEKQFEYNTYIRDFFADNQGRSLEEAIKCWNYKKQMQGHNR YERADLAAIWGAGS >gi|224461045|gb|GG657759.1| GENE 190 194289 - 194906 541 205 aa, chain - ## HITS:1 COG:BS_ydeA KEGG:ns NR:ns ## COG: BS_ydeA COG0693 # Protein_GI_number: 16077578 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Bacillus subtilis # 3 192 2 185 197 124 38.0 1e-28 MKKQILFVILEQFADWEAAYLSSAVYMLGMGEYDVKTVSLSTDMVTSIGGFHVVPDHSIE SVPSDYEALILIGGMAWRNENAGKIRPLVDSCLAEGKVLGGICDASAFLGTTGALNNVKH TSNDLDDLKQWAGGMYTGEERYVTRQAVRDKNVITANGTAPLEFAKEVLLALKAAPEEKI TEWYNFHKLGYYEAAMPQDAATWNS >gi|224461045|gb|GG657759.1| GENE 191 194938 - 195360 277 140 aa, chain - ## HITS:1 COG:CAC3491 KEGG:ns NR:ns ## COG: CAC3491 COG3871 # Protein_GI_number: 15896728 # Func_class: R General function prediction only # Function: Uncharacterized stress protein (general stress protein 26) # Organism: Clostridium acetobutylicum # 12 140 13 140 145 112 41.0 3e-25 MLRDAEKTIGNLIDKQGVSFIASVSEDGFPNMKAMLPPRKRTGIREFYFTTNTSSMRVAQ YRNNPNASIYFCDRRFFRGVMLVGHMEVLEDSDSKEMIWQEGDTMYYPEGVTDPDYCVLK FTAVSGRYYANFHSETFEIN >gi|224461045|gb|GG657759.1| GENE 192 195324 - 195404 73 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVELIHITIERRIRTCCVTLKKQSEI >gi|224461045|gb|GG657759.1| GENE 193 195477 - 195965 166 162 aa, chain - ## HITS:1 COG:no KEGG:Clole_4115 NR:ns ## KEGG: Clole_4115 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 1 155 1 154 154 120 42.0 2e-26 MDKKIEFNDFITSVPVESQDFVKELHNRLTELGCRTEIKSAKSGYMVSYIYNKKTISNYV FRKKGMLVRIYGAHAGQYEKLLETLPDEMIHAVQDAPICKRLAVPDSCNPRCSMGYDFRL KGERYQKCRNGAFMFLVCPQNNPYIQSLILSEIEACERSSWN >gi|224461045|gb|GG657759.1| GENE 194 196177 - 198429 1758 750 aa, chain - ## HITS:1 COG:lin2156 KEGG:ns NR:ns ## COG: lin2156 COG0178 # Protein_GI_number: 16801222 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Listeria innocua # 2 738 4 743 746 773 51.0 0 MEDIIVHGLTQNNLKHITFRIPKEKITVFTGVSGSGKSSIVFDTIAAESQRQMNATYPAF VRARLPKYPKPAVERIDNLTAAVVVDQSPLGGNARSTVGTISGLYASLRLLFSRIGQPCA GTASCFSFNDPNGMCKTCSGLGKITQVDINALLEPDKSWNEGCVRDTLYRPGSWYWKQYA ASGLFDLDKPVREYSKEEYNLLLYGSRDGRGEPENPKVAGLFHKYTKTLLNRDISKKSRH TKEKSQNLLVESECTDCRGKRLNEAALNCKIGGYSIADMCDMELTLLRKVLRQITDRTVT VLVQTIIEGLDRMIEIGLPYLHLNRETPSLSGGEAQRLKLVRYMGSSLTGMTYIFDEPST GMHPRDVHRMNRLLERLRDKGNTILVVEHDKDVISIADHVIEVGPLAGQNGGEIVFAGSY AELLCSDTLTGKAMRQSLPIKESFRQPLGSLPVRDASLHNLKHIDVDIPLGIMTVVTGVA GSGKSTLISGVFAGQYESDTVMVDQGPITATNRSTPASYLGFFDEIRKLMSQNSGRPEGL FSFNSAGACPVCGGKGVIVTELAFMDPIVTECETCGGARYSEEALACTYKGRNIVELLNL TASQAMELFEDAKIRKCLKVMEQVGLSYLTLGQPLSTLSGGERQRIKLAKNLGKRGSIIV LDEPTTGLHMSDIKNLLQLFDMIVSRGNTLIVIEHNLDVMKQADWIIDIGPDGGKNGGEV VFTGTPADMARNAKTLTAGCLRASCIEEGQ >gi|224461045|gb|GG657759.1| GENE 195 198670 - 199533 387 287 aa, chain + ## HITS:1 COG:YPO0456 KEGG:ns NR:ns ## COG: YPO0456 COG2207 # Protein_GI_number: 16120785 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 1 287 1 287 288 93 26.0 5e-19 MKQYSPLERALEYIEEHLNDNIGLNEVSKETGYSYYYMTRLFTSVLGESVGRYINRRKLY NASRKLIDTDERVLDIAVDCGFASSEAFSRAFKSEFGSSPAEYRKAGADLVVNAKRELVP EDVYHIAHNISRSPEIIMTDETKVAGVRGTTSLSDNRIPEIWKQFLLFPKELFDGADVGY GICETKRAVYTRDGDVLFTVMAAGAVDTFESLPRTLDRKILSAGKYAVFTHRGTFANLHR TYRYIFGTWLKTAGEELDDREDFEMYQRKIVSYDDPDNEVKIFIPIK >gi|224461045|gb|GG657759.1| GENE 196 199644 - 200012 120 122 aa, chain - ## HITS:1 COG:no KEGG:DSY4315 NR:ns ## KEGG: DSY4315 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 117 314 430 430 150 69.0 1e-35 MPFNTAGPLSDTISVSASGNELVVLESGVYQITVSINAETTTEPDPEQPYLTAVITVNGA PVFGDISTFFNISNRDSSTFVIQAPLSAGDEVGVSIYTNFPALGYMNRSMTLVRLGSEML NK >gi|224461045|gb|GG657759.1| GENE 197 200264 - 203278 2722 1004 aa, chain - ## HITS:1 COG:CC2501_1 KEGG:ns NR:ns ## COG: CC2501_1 COG0642 # Protein_GI_number: 16126740 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Caulobacter vibrioides # 620 901 259 535 538 199 42.0 2e-50 MQPGKEDGGQIKQMDDYNNLFQSVMCGIVQYRLTNEKAVFKKANREAVRIFGYSHEEFWS VGEWAADVLIAEEDRAYILGLLRELRRPGDKISFEYRLLQKGGTPCWIIGSAELIVDVDG EEVIQSVYLDINERKNAEQRSRRLSEQLEASNEILHLALEHTTTCEIYYYPETKECIVPK RTCQIYHCRERYDDMPRSFAKEHVDEETRADFYEMYRRIQDGAHTASCEFKILEGGSWCR ETMSVIQTGENGRPKLVIGIVENITKQKEMECALEEARSRDKLTGLYNKESGIRLVKEYL RTKKPGEHGVMMLFDMDDFKQINRTEGSIFANALLQEVADLLRSESRPDNIQIRLGGDEF MVFFKNSCKAEATVIGPRIADQVRSILVSTDKKIQISVSVGMCSTEVVDEYNALYRCAES TLKYVKENGKGQAACYLDTSNELGVFLTQLYTDSHPVNDINRETSRPDDDLVSFALDLLG KSKNLDDAVFLLLSRIGRTFQFDRVSIIEADRAYLSYRFSYQWARNRNDLQLGQDFYASE EDFDICANMYDEDGLADHNVREGISHIASCLHGGIWNYGEYVGSMSFEIDVEDYEWTQEQ RKLLKELVKIVPSFIMKSKADAVSRAKTDFLSRMSHEIRTPMNAISGMTTIAKSVLDDRK KTMDCLNKIESANAYLLSLINDILDMSRIESGKMELNYEPVDLVQLMQKLEYLFKAQAEE KHLELIFVNEYSGGRRLNADSLRLNQVLVNIIGNALKFTGQGRITVRVEELEASPMAVLR FSVADTGIGIEPEALSRVFNAFEQADPATAARNGGTGLGLAISSRLVQMMGGTLEADSKV GEGSEFFFTLHLGYAEEEEEETDTQPEMEAHPADFTGRRILLAEDNELNREIAQSILEMH GFDVTCAPNGREALECFCRSETGTFDAILMDIRMPVMDGLEAARRIRTSGRPDARTVPVI ALTANAFDEDTRKSIASGMDGHLSKPLQVEQMLVTLNACIKKNR >gi|224461045|gb|GG657759.1| GENE 198 203372 - 204670 1643 432 aa, chain - ## HITS:1 COG:VCA0088 KEGG:ns NR:ns ## COG: VCA0088 COG1301 # Protein_GI_number: 15600859 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Vibrio cholerae # 6 427 4 421 424 348 49.0 1e-95 MGNSKIEAKKKLGLTTKIFIALLAGAVCGIILCYAVPAGSVRDDIIVNGVLHVIGQGFIR LMKMLVVPLVFCSLVCGSMSIGDTKKLGTVGVRTLVFYLCTTALAITVALSVGNIINPGR GLDMSKIQSGAADVGSTEAVSLTDTLLNIIPDNPINSLANGSMLQIIVFALIVGVILAKL GERTETVSNFFSQFNDIMMEMTMMVMNLAPVGVFCLIAKTFAGIGFSAFVPLGKYMLGVL IALAVQCFVVYLGLLKLFTGLNPLKFIKNFFPVMAFAFSTATSNATIPLSIDTLAKKMGV SKRISSFTIPLGATINMDGTAIMQGVAVVFAAQAFGIQLDIVDYITVIGTATLASIGTAG VPSVGLVTLTMVFNSVGLPVEAIGLIMGIDRILDMTRTAVNITGDAVCTTIVAHQNKALD RDVFSRTAGAGH >gi|224461045|gb|GG657759.1| GENE 199 204671 - 205531 1080 286 aa, chain - ## HITS:1 COG:CAC2315 KEGG:ns NR:ns ## COG: CAC2315 COG1091 # Protein_GI_number: 15895582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Clostridium acetobutylicum # 2 277 1 276 280 250 43.0 2e-66 MLKVWIVGAGGQLGTAINDVLDPLDAEVFNTDKEELDITHTDEVISFGEINRPDVIINCA AVTDTALCEEQPELAYRVNALGARNLSIVARKTGAKIVQLSTDDVFDGLSTTPYSEFDDT NPRTVYGRSKRAGENYVKEFTHKHFIVRSNWVYGKGDNFVNSVLEKAGSQKQLSVAADQF GSPTSARDLGRLILYLIGTNEYGTYHATCKGTCSRYEFAEEILKLADRNIELKPVPARES ELASVRPAYAVLDNFILRIIDVYEMPDWRASLEEYMEEWKNKGGIG >gi|224461045|gb|GG657759.1| GENE 200 205715 - 206017 192 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568041|ref|ZP_03777066.1| ## NR: gi|225568041|ref|ZP_03777066.1| hypothetical protein CLOHYLEM_04114 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04114 [Clostridium hylemonae DSM 15053] # 1 100 1 100 100 204 100.0 2e-51 MNSSEKRRRQLLDETRYLYSDRKVPPAVHPRYGAAYHKLYGEEETGAVSTFGIRVFLCFM LFAAFVAMENNGIEVKHVSSDRVIQEITTDMDVAEVWKNL >gi|224461045|gb|GG657759.1| GENE 201 206109 - 207392 1574 427 aa, chain - ## HITS:1 COG:CAC0942 KEGG:ns NR:ns ## COG: CAC0942 COG0139 # Protein_GI_number: 15894229 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Clostridium acetobutylicum # 223 325 9 105 115 129 60.0 9e-30 MSYKRLIPCIFIRGAKAVKWFTDETVISEDVIGLAKYYSDHGADELLVFDLSDSDEEHEE AIDLMKRMNRVIRIPMVAGGNIRRQEDIKKILYAGAKRAMLNFSKADSVKLIEDAARRFG KEKMAVSLNDFDALFKHQHLIQDYSSEIVFMHRLDLNSVMNVTDVPCVIVTDTMEEPELF KILKCPGVKGLSGKFVSQTDMDFVEFKEKCGQEEIKMTSFESMMEFSQFKTNEQGLIPVV VQHYKTQEVLMLAYMNEEAFYSTIKTGKMTYYSRSREQLWTKGETSGHFQYVKSLTIDCD YDTLLAKVDQVGPACHTGNATCFFQPLVGSDYDETNPLQVFETVYGTIMDRRENPKEGSY TNYLFDKGIDKILKKVGEEATEIVIAAKNPNPEEVKYEMADFLYHAMVLMVERGISWEDI VKELADR >gi|224461045|gb|GG657759.1| GENE 202 207408 - 207995 485 195 aa, chain - ## HITS:1 COG:CAC0938 KEGG:ns NR:ns ## COG: CAC0938 COG0131 # Protein_GI_number: 15894225 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Clostridium acetobutylicum # 2 195 4 197 197 210 53.0 1e-54 MKRTAECTRKTKETDITVKLTLDGTGQNDISTGIGFFDHMLDGFARHGLFDLTVKVKGDL RVDCHHTVEDTGIVLGQVIARAVGDKAGIKRYGHFILPMDETLVLCAADLSGRPYLSCDA SFPTERIGEMDTEMIREFFYAVSYSAMMNLHLKILNGGNSHHMAEAMFKSFGKALDMATM EEPRIKEAWTTKGSL >gi|224461045|gb|GG657759.1| GENE 203 208009 - 209304 1413 431 aa, chain - ## HITS:1 COG:BH3582 KEGG:ns NR:ns ## COG: BH3582 COG0141 # Protein_GI_number: 15616144 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Bacillus halodurans # 30 430 24 422 424 444 56.0 1e-124 MKILRLDKETKQNVLEDLLKRSPNNYAGYEQGVSEILKRIKEEKDSALYEYTRKFDGAHI NAGNIKVTEEEFQEAYEQMDDSLLAIMRKALVNIRTYHEKQRQYSWFDSKPDGTILGQKV TPLYRVGVYVPGGKAVYPSSVLMNIVPAKVAGVGEIIMVTPPGKDGRVSPNTLVAAREAG ADAVYKAGGAQAVGALAYGTESIPKVDKIVGPGNIYVALAKKAVYGHVSIDAIAGPSEIL VVADETADPRYVAADLLSQAEHDELASAILVTTSEKLAGEVSAQADAFAEQLSRSEIIKK SLDNYGYILVADTMDDVIDIANDIASEHLEIMTRDPYNVMMKIRNAGAIFIGEYSSEPLG DYFAGPNHVLPTNGTAKFFSPLSVDDFIKKSSIIGYSREALEEIHTDIEAFAEAEQLTAH ANSVRVRFEER >gi|224461045|gb|GG657759.1| GENE 204 209339 - 209980 697 213 aa, chain - ## HITS:1 COG:CAC0936 KEGG:ns NR:ns ## COG: CAC0936 COG0040 # Protein_GI_number: 15894223 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 2 212 5 212 215 190 47.0 1e-48 MRYLTFALGKGRLANQTLELFEKIGITCEEMKDKDSRKLIFTNEELKLKFFLAKGPDVPT YVEYGTADIGVAGKDTILEERRKVHEVLDLGYGKCSMCVCGHKEAAPLLQHHELIRVATK YPNIAKDYFYNTKHQTVEIIKLNGSIELAPIVGLSEVIVDIVETGSTLKENGLEVLEEVC PLSARMIVNPVSMRMESGRIKALLTKLRAQIQI >gi|224461045|gb|GG657759.1| GENE 205 209985 - 211250 1353 421 aa, chain - ## HITS:1 COG:CAC0935 KEGG:ns NR:ns ## COG: CAC0935 COG3705 # Protein_GI_number: 15894222 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Clostridium acetobutylicum # 10 382 7 386 407 234 34.0 3e-61 MGGIMKKLLHTPEGVRDIYNVECGKKLALESRLGKVFHLYGYHDIQTPTFEYFDVFRKEI GTIPSKDLYKFFDKDGNTLVLRPDITPSVARAAATLFGEEQLPIRLCYTGNTFVNHSSYQ GRLRENTQMGAELMGDDSVEADAEMLALVIECLTSIGLKEFQLNVGNVDYFQSLIEDADL DEEAEDRVRELINNRNYFGVEQFLDSIHVKRSSKEAFSALDELVGGVEILAQARNTAPNS KGIMAVKRLERIYDVLKIYGVEEYVTFDLSMSGTYGYYTGIIFRGYTFGTGDAFVKGGRY DRLLEKFGKESASIGFVIVIDELMNALTRQKVRIVYTRKNTLIVYDEERLKEALILARDF RKKAKNTELVKKSKGKLIEDYIEYGKEYYAGNLIYINKNGEITMINLVTGEHKVIASRDR S >gi|224461045|gb|GG657759.1| GENE 206 211326 - 211874 608 182 aa, chain - ## HITS:1 COG:L131245 KEGG:ns NR:ns ## COG: L131245 COG3331 # Protein_GI_number: 15672526 # Func_class: R General function prediction only # Function: Penicillin-binding protein-related factor A, putative recombinase # Organism: Lactococcus lactis # 8 170 42 207 213 112 40.0 4e-25 MGTWNSRGLRGSTLEDLINRTNERYLEKDLALIQKIPTPITPVKMDKEHRQITLAYFDQR STVDYIGVVQGIPVCFDAKECVADTFPLQNIHEHQVAFMGSYEKQGGMAFLIIYFSARNI LYYMRFCEMQGFWERAKNGGRKSFRFDELDPRFLLELKNGCFVPYLDAMNLDLELREKLD KE >gi|224461045|gb|GG657759.1| GENE 207 211823 - 212848 699 341 aa, chain - ## HITS:1 COG:CAC1015 KEGG:ns NR:ns ## COG: CAC1015 COG0564 # Protein_GI_number: 15894302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 4 323 3 314 318 199 34.0 8e-51 MKIIIIKPNESEQRLDKFLKKYMNRAPGSFLYKMLRKKNITLNGRRAGGNEKLHTGDEVR LFLSDETIEKFTGDDEPVAGAKGRNTTLDIIYEDSHVLFVNKPAGMLSQKAEKTDISLVE HIISYLLDSGQLTREELRTFRPSVCNRLDRNTSGLVAAGKTLAGLQMFGSLFRDRNLRKY YLCIVKGKVDKPSHIKGYLIKNEQTNEVRIVTSGEAEKAAPIETEYIPLAYSREHSLLRV HLITGRTHQIRAHLAYVSHPLCGDYKYGDRDVNERYRKKYGVTSQMLHSYELVLPVLEGE FAALSERTFRAPVPALFQKVIKETAWEHGTQEALEVLHWKI >gi|224461045|gb|GG657759.1| GENE 208 212887 - 213462 710 191 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01028 NR:ns ## KEGG: EUBELI_01028 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 2 191 3 191 191 87 28.0 3e-16 MKIQKGQPGYIKAQKQKLLLFTIMEFAIVVALLLLGYFQTGTKLNLLTAVAVLGCLPASK MLVEFIAIAPYKAVDPEKYMETEEKAALLTTAYDMVITSKEKIMPVDAVVISGNTVCGYA SNPKTDVAKVAKHLKETLHQNRLDKVTVKIFSDYAAFIARAEGMNNMAAIDRPDTQKLEQ KIRGTILSTSM >gi|224461045|gb|GG657759.1| GENE 209 213481 - 214248 677 255 aa, chain - ## HITS:1 COG:AGl1280 KEGG:ns NR:ns ## COG: AGl1280 COG0300 # Protein_GI_number: 15890762 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 242 37 280 291 112 35.0 7e-25 MRIAIITGASSGIGREFARQIPKLYRQLDEIWVAARSTDKLKELEKELPLPVRIFDGDLT RDYIYERIGRELERKSADIRMLVNAAGYGLIGEAAKLDMKSQAGMIDLNCRALTKMTLMC IPYMSAGSRILQIASAAAFAPQPDFAVYAATKSYVYSFARGTGSELKRKGIVTTVVCPGP VDTAFFERAGASGSDFKQKFMSGPKDVVHKALADSAARREVSVYGAAMKAARAAAKLLPS RLVILLMKTGSKKAE >gi|224461045|gb|GG657759.1| GENE 210 214260 - 216170 1642 636 aa, chain - ## HITS:1 COG:MA4618 KEGG:ns NR:ns ## COG: MA4618 COG1032 # Protein_GI_number: 20093399 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Methanosarcina acetivorans str.C2A # 5 596 126 737 742 590 49.0 1e-168 MIKGFLPICRRDMEERGWERPDFVYVSGDAYVDHPSFGHAIITRTLEAYGYKVAIIPQPD WKDKTSITEFGEPRLGFFVSAGNMDSMVNHYTVSKKKRKTDAFTPGGVMGKRPDYATVVY CNLIRQVYKKTPVIIGGIEASLRRLAHYDYWSDKLKRSILLDSGADLISYGMGELSVVEI AEALDAGIEVKDITYIPGTVCKVKDLESVYDAVVLPSFDDLKRDRLNYAKSFYTQYCNTD PFAGKRLVEPYGEHQYVVQNPPSRPLTQSEMDRVYSYPYMRTYHPSYEKDNGVPAISEVK FSLVSNRGCFGGCSFCALTFHQGRIMQVRSHESLLAEANQFIWEEDFKGYIHDVGGPTAN FRHPSCDKQLRTGVCTKRQCLFPKPCGNLKVDHKDYIVLLRKLRELPKVKKVFIRSGIRF DYVMADKDDTFFRELCQYHVSGQLKVAPEHVSDAVLSKMGKPENRVYQSFVSKYKKINND IGKEQYLVPYLMSSHPGSTMKEAVELAEYLRDLGYMPEQVQDFYPTPSTISTCMYYTGVD PRDMKPVYVPKNPHEKAMQRALIQYRNPKNHELVLEALKKAGRMDLVGFDRHCLIRPRHS GSDKATKPGNGPNRQENRTARKKKTIRNVHKKKKTR >gi|224461045|gb|GG657759.1| GENE 211 216167 - 216853 693 228 aa, chain - ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 6 219 1 213 215 164 42.0 1e-40 MEQTDMLKDTEAIIFDMDGTLIDSMWIWPSVDDDYLCKYHLDKPDDFHEMMEGKSYVEVA QLFLDLFPGLDRTLQEVMDEWMDMTYDRYTHSVELKEGAHEFILDMRAEGRKIGIATSNA GTLADAALNALDVRGLFDSVHSACEVERGKPSPDVYLLVAEELKVPPERCLVFEDVPMGI LAGKRAGMKVCGVDDEFSRPQESRKKELADYYIQTYYDIRKGTYEVLT >gi|224461045|gb|GG657759.1| GENE 212 216807 - 217577 649 256 aa, chain - ## HITS:1 COG:lin2436 KEGG:ns NR:ns ## COG: lin2436 COG1187 # Protein_GI_number: 16801498 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Listeria innocua # 7 238 1 227 233 229 53.0 3e-60 MEAVLMIRLDKYLADMGIGTRQEVKKHIRQGKVKVDAAVVKSPEYKVNEKESTVLYGDSP VRYEAFVYYMLNKPAGVISATEDRREKTVVDLIKTKERKDLFPAGRLDKDTEGLLLITND GKLAHSLLSPKKHVDKTYYARVKGIVTEEDARAFAEGIDIGTSALPEWTRPAVLEIISSG QESAVRLTIQEGKFHQVKRMFLARGKEVVYLKRERMGGLVLDSSLKPGEYRKLTDEELRN IYGTDRHAEGHGSDYI >gi|224461045|gb|GG657759.1| GENE 213 217562 - 218944 1098 460 aa, chain - ## HITS:1 COG:SP1402_1 KEGG:ns NR:ns ## COG: SP1402_1 COG0144 # Protein_GI_number: 15901256 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pneumoniae TIGR4 # 1 301 1 280 280 204 41.0 4e-52 MNLPCAFEDKMKELLAGEYPDYIACYEEPRYYGLRVNTNKITTEEFKKICPFDITPVPWI PNGFYYDGETVSPSKHPYYFAGLYYLQEPSAMTPASRLPVNPGEKVLDLCAAPGGKATEL GAELCGTGVLAANDISSSRAKGLLKNVEVFGIGNMLILSEEPGRLSGYFPGYFDKILIDA PCSGEGMFRKDRKMVRAWEEHGPEFFSSIQKSIIVQAADMLRPGGMMMYSTCTFDGRENE QTVEHLLKNRPEFEIMDMEPYEGFSPGRPELSETHCPELVRTVRIFPHHMKGEGHYLALL KKNGSAAAEKSAVPGKRNGTVLPSELAEFMENVSWKLKESRIDIRGERIYYMPEGLPDLR GVRFLRTGLLLGELKKKRFEPSQALAMHLKKDDYKETLDFSAGDERVSRYLKGETLHLDD MVSDRSKGWYLVCVDGYPLGWGKLSQGTLKNKYLPGWRLC >gi|224461045|gb|GG657759.1| GENE 214 219026 - 219739 640 237 aa, chain - ## HITS:1 COG:BS_yunA KEGG:ns NR:ns ## COG: BS_yunA COG0739 # Protein_GI_number: 16080287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Bacillus subtilis # 80 236 201 345 349 97 39.0 2e-20 MKRIRPGRILLLLLLTALFTVLLTGHIYDRAVRNRMKKETIADLTYRTEFYSDSMREEKE KLSKGCRELLENVENEVSYFPIPESTVDKSLTVSFVDSWMAERKYNGTSGHEGTDIMAGE NERGLYPVLSMTDGTITNLGWLEKGGYRVGITSDSGTYYYYAHLDSYGNIHKGDKVKAGQ FIGYMGDSGYGEEGTTGQFDVHLHLGIYSYKTGEEISVNPYYVLLSLENKKLKYSYS >gi|224461045|gb|GG657759.1| GENE 215 219831 - 220409 640 192 aa, chain - ## HITS:1 COG:no KEGG:CLOST_0692 NR:ns ## KEGG: CLOST_0692 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 2 177 3 179 188 140 45.0 3e-32 MNREISGTTKLMMCGLAIAVNIVLGIVMAAAKFPVYLDTIGTIFIAVYFGPWYGAAVGGA TNFLTALLYGMSDMPFMLVNIAVGLVIGLLFCKVKFTFLNVVIAGIIAGIVAPVIGTPIG IAVYGGLTGTISDVAVIWLKQSGASIFTASFLPKLANNLVDKTGSCLLIFLLVKAMPGAL KPKCWMRKRAEA >gi|224461045|gb|GG657759.1| GENE 216 220617 - 221132 353 171 aa, chain + ## HITS:1 COG:MJ0003 KEGG:ns NR:ns ## COG: MJ0003 COG5418 # Protein_GI_number: 15668175 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Methanococcus jannaschii # 11 110 12 110 156 66 36.0 2e-11 MSHCFFNDAAKLRNQNIEEMTAERRDKREFLTYLLSEGYEIIQLPCPEFLLYGSRRWGHA ASQFDTPHFRAEARRMLEPVVMQLEEYNAFPDRYELTGIIGIDGSPSCGIDFTYDGDWGG EFGSKESVSPVPGTLNKVSSPGIFMHILKEMLSEKHLFVEFYSIDTFMSAR >gi|224461045|gb|GG657759.1| GENE 217 221167 - 222615 1355 482 aa, chain - ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 4 482 5 486 486 338 37.0 1e-92 MAVLDQLEPKKVFQFFEELCQIPHGTFDTKRISDHCVAFARERGLEAAQDDANNVIIRKP GTKGYENSEPVILQGHVDMVCEKKPGSSHDFSREGLELYIEDGYVKAKDTTLGGDDGIAV AMIMALLDSNDIPHPPIEAVFTTDEEVGMGGAMAIDLSVLKGRKLINIDSEEEGILTTGC AGGFRYETLIPVHRERKTGTIVTLKIHGLQGGHSGIEIHKQRGNAHKMMGRLLNHIGKSV EIGLAEINGGSKDNVIAMESTAEILVADKDAAAVKAMADEMKAVWDNEFMGDEPGLAVEA DTSADSTVDVCDKAGTERVISYLVTCPYGVQGYSRKLKGLVETSMNIGILETAADHVKTV YLARSSVESKKQEMKEVLAACAKTAGGEGQCYNEYPAWQFNPDSELRQIMEDVYEDMFGK KPEVTTVHAGLECGLFLGKKPDLDCVSFGPDIMDVHSFNERLGIESTARSWKYLQAVLAK CK >gi|224461045|gb|GG657759.1| GENE 218 222738 - 223670 547 310 aa, chain + ## HITS:1 COG:BH2588 KEGG:ns NR:ns ## COG: BH2588 COG3314 # Protein_GI_number: 15615151 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 222 6 244 411 95 28.0 1e-19 MKRRFFMILIICMFGLMLVFPKPVFNGASEGLLLWFNVVLPTLLPFIIISNLLIRTNAAT LIARITGPLFCRLFSVSGYGSFAVLTGFLCGYPMGSKVTADLHNGGYISGEEGRYLLSFC NNTSPMFIISYVIWQNMKDESLTLPAIAILMAAPVLCSFLFRRYYHMSHAAGGRIYHLPA QKAASSSVLDDCIMNGFETITKVGGYIMLFSVLISLAQLLPFHHPALMLAGLPSLEITNG ISMLCTSCSEPGLRFVLAMGLTSFGGWCSVAQTRCMVQEAGFPIFPYIIEKLVTAGVTSL LAYGYIVLLK >gi|224461045|gb|GG657759.1| GENE 219 223659 - 224291 1068 210 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1679 NR:ns ## KEGG: EUBREC_1679 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 206 14 219 231 167 56.0 3e-40 MSSRIEQIIEEIEEYIDSCKFQPLSTSKIIVNKDQMDELLRELRMKTPDEIKRYQKIIAN KDAILADAQAKADSMIEEAQIHTNELVSEHEIMQQAYAQANEIVTAATEQAQEILDNATS DANDIRIGAMQYTDDLLANAESIIGHTLDSYTTKYDGLVNSLQECYDMVRSNRTELDIPE QSARTLEAEYGTPEEPEEELQIEDDEDLLQ >gi|224461045|gb|GG657759.1| GENE 220 224295 - 224783 439 162 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 5 159 7 161 164 173 53 3e-41 MLRAVYPGSFDPVTYGHLDIIERSSKLVDELIIGVLNNKAKTPLFSAEERVRMLKEVTKG MPKLTIVPFDGLLVEFARRMEATMIVRGLRAITDFEYELQMSQTNHKLEPEIETVFLTTS LDYSYLSSTTVKEVAAFGGDISQFVPDFVADTIREKMNRRRV >gi|224461045|gb|GG657759.1| GENE 221 224777 - 225346 613 189 aa, chain - ## HITS:1 COG:FN1329 KEGG:ns NR:ns ## COG: FN1329 COG0742 # Protein_GI_number: 19704664 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Fusobacterium nucleatum # 1 149 1 150 182 133 46.0 2e-31 MRVIAGSAKRLQLKTLEGMDTRPTTDRIKETLFNMISPYLYDCIFLDLFAGSGGIGIEAL SRGAMEAVFVEKNPKAMACVKENLRRTKLSHRAATMSTDVMTALYKLEGDKQFDFIFMDP PYGLQLERKVLEYLAESELLADEGVIIVEASRETEFDYLKELGFMILKVKEYKTNKHVFI EPAGRKEIC >gi|224461045|gb|GG657759.1| GENE 222 225566 - 225772 351 68 aa, chain - ## HITS:1 COG:no KEGG:Closa_1963 NR:ns ## KEGG: Closa_1963 # Name: not_defined # Def: small acid-soluble spore protein alpha/beta type # Organism: C.saccharolyticum # Pathway: not_defined # 3 68 2 67 67 84 77.0 1e-15 MASRSSNRAAVPEAKGALDKFKYEVANELGVPLTEGYNGDLTSRQNGSVGGYMVKKMIEQ QEKQMAGK >gi|224461045|gb|GG657759.1| GENE 223 225872 - 227902 2325 676 aa, chain - ## HITS:1 COG:BH2495 KEGG:ns NR:ns ## COG: BH2495 COG1200 # Protein_GI_number: 15615058 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Bacillus halodurans # 9 668 2 654 673 511 41.0 1e-144 MIELTRIKELKGIGDKTEKLFGRLGIATVGDLVRYYPRGYDVYDDPVPISEAEEGSVVTV TGAIFGRVQVSGTRNMQVTTIYVKDITGTLKVIWFRMPFLRNTLAKGGVITLRGRIVNRK SGIVMEHPEIFYPSAKYEEKLHTLQPVYALTAGLSNNAVMKAVQQALMELDLTKETLPDE IRLKYKLAEYNYAIRGIHFPEDKEVFYHVRERLVFEEFLEFILALRRLKDSNEKEQNHYP VKKAPETAAFLSQLPYELTGAQKKVAEEISADMAGASAMSRLVQGDVGSGKTIVAVLALM DTAFSGYQGALMAPTEVLARQHYESITNLFSQYGIRLGAELLTGSMTAKEKREAYGRIES GEVQIIVGTHALIQEKVNYKNLALVVTDEQHRFGVKQREAFARKGGVPHILVMSATPIPR TLAIILYGDLDISVIDELPANRLPIKNCVVDTGYRKTAYTFMKNQVKEGRQCYVICPMVE ESEHLEVENVMDYAQMLQDELGEAVGVACLHGRMKQAEKDDIMERFGRNEIQVLVSTTVI EVGIDVPNATVMLVENAERFGLAQLHQLRGRVGRGRHQSYCIFMSASRSKETKERLDILN KSNDGFKIASEDLKLRGPGDLFGIRQSGLMDFRLGDVFQDAQLLKKANEAADLLLNNEKE WLKKFPKYEGTSSVII >gi|224461045|gb|GG657759.1| GENE 224 227987 - 229657 2251 556 aa, chain - ## HITS:1 COG:BS_yloV KEGG:ns NR:ns ## COG: BS_yloV COG1461 # Protein_GI_number: 16078647 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Bacillus subtilis # 1 556 1 553 553 462 45.0 1e-130 MATKTINVDMLARMFLAGAQNIEAKKEYINELNVFPVPDGDTGTNMSLTIMSAAREVTAL DKPDMADLAKAISSGSLRGARGNSGVILSQLLRGFTKSIREEKEIDTLGLAAACARARDT AYKAVMKPKEGTILTVASGIADKAAEMAEETDDLELFIPAVIKHAEEVLEKTPDMLPVLK EAGVVDSGGQGLLEVIRGAYDAFQGKEIDYSAIEPAKVAAAAPKVTQESGDIKFGYCTEF IILTEKEFTDDDETGFKSYLSSIGDSIVCVADDDVVKVHVHTNDPGLAIQRALTYGQLSR MKIDNMREEHQEKLIRDAQKLAAQQKAEETKKPSEPRKAMGFIAVSIGEGLNEIFTELGV DYIIEGGQTMNPSTEDMLNAIEQVNADTVFILPNNKNIVLAANQAKALVEDKDIIVIPTK TVPQGITAVINFMPEADAAVNEETMLEEIKNVKSGQVTYAVRDTHIDDKEIHEGDIMGIG DKGILAVGQDVEATTREMLINLVDEDSELISLYYGEEVKKDDAERFTAEIEALYPDVDVD AHYGGQPIYYYVLAVE >gi|224461045|gb|GG657759.1| GENE 225 229677 - 230036 481 119 aa, chain - ## HITS:1 COG:BS_yloU KEGG:ns NR:ns ## COG: BS_yloU COG1302 # Protein_GI_number: 16078646 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 5 119 5 119 120 92 45.0 1e-19 MKGCMSTDLGIITIDPEVIAKYAGTVAVECFGIVGMAAVNMKDGFVHLLKKESLTHGIQV SISEDNHITLNFHIVVAYGVSISAVTENLISNVKYKVEEFSGMPVDTINIYIEGVRVID >gi|224461045|gb|GG657759.1| GENE 226 230166 - 230354 234 62 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|160881022|ref|YP_001559990.1| ribosomal protein L28 [Clostridium phytofermentans ISDg] # 1 62 1 65 65 94 71 2e-17 MAKCAICEKGAHFGNNVSHSHRKSPKMWKSNVKSVRVKTANGATKKMYVCTSCLKSGRVE RA >gi|224461045|gb|GG657759.1| GENE 227 230466 - 231707 996 413 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1016 NR:ns ## KEGG: EUBREC_1016 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 129 129 254 256 138 50.0 4e-31 MIKERSLATYIILTFLTCGIYSIFFWYSYTEDVNRMCRGDGEESMNYILVLLLSIITCGI YGLYWFYKQANRLRKAGPRYGVAVAEGGGEFLMWYLVGCLICFVGSFLSFNVLIKNANLI ADAYNRQNGNPTPPPYGSGPAGTEAAYGAASGGTCFCSRCGEKMFTSDRFCPQCGAKNER AGEADRSQPKSFSYDANAAGQKQASGMPATGLDGIKSLTPGRLNAVVAAAAFVLLIIDRL WAGAGFFSLFSMIEFILPAVCFAAFGVLCFMERREYRQYEIIPLIAYFGLLFLSGIRVSG ITAYTSYSWVWNYYSAFDNFCSVILALAALTAAGCLIMELAGRRCDMVLLVALLVIFGMT LLTGVISLFTQMRYWGFPQIYFFFTLFVSVVSQLPALLYVLQRNPKLLDHLKK >gi|224461045|gb|GG657759.1| GENE 228 231710 - 231979 186 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568068|ref|ZP_03777093.1| ## NR: gi|225568068|ref|ZP_03777093.1| hypothetical protein CLOHYLEM_04141 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04141 [Clostridium hylemonae DSM 15053] # 1 89 48 136 136 147 100.0 3e-34 MARLDFAASFSYHPLFLPTGFAIWYIFHKDVLPERFRLKKKTARILGGVLLFLLLALYIY RVGFQPDGVIKIDLDDGLIFKIMRAIQGG >gi|224461045|gb|GG657759.1| GENE 229 232120 - 232530 399 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568069|ref|ZP_03777094.1| ## NR: gi|225568069|ref|ZP_03777094.1| hypothetical protein CLOHYLEM_04142 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04142 [Clostridium hylemonae DSM 15053] # 1 136 1 136 136 237 100.0 2e-61 MIKCVKCGSELREGSLFCTYCGEKTESRPDSSQFIGQVEKADAQADGLDGLFAQIRAYVK SETDKQQKVLSEKEERIRTLELELKEKEALIAQLNGKLKDLENAAPVAPDKRECPKCGNA LSDDMVFCNQCGTKVR >gi|224461045|gb|GG657759.1| GENE 230 232622 - 232765 177 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRVVGFALLCLAVGIIFTILVRHPFIELICAIVCALVGYELFCGKE >gi|224461045|gb|GG657759.1| GENE 231 232826 - 233233 577 135 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00954 NR:ns ## KEGG: EUBELI_00954 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 127 29 155 157 154 67.0 1e-36 MAENNFKGTVEALFHGMDGVITSKTVVGDAIHIGDTILLPLVDVSFAVGAGAFNGDKKER GAGGIGGKMTPCAVLVIQNGYTKLVNIKNQDTMTKILDMIPDVIEKFGSKGEDKMTEKDV DDILNEAEAAEDIAD >gi|224461045|gb|GG657759.1| GENE 232 233256 - 234218 607 320 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00953 NR:ns ## KEGG: EUBELI_00953 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 303 1 316 327 110 29.0 1e-22 MLHIILLILKIIGIIIAAILGILVLLVCIVLFVPFRYRIEAVSGGSADSIQADIRCTWLL RLVTFKASYRAGEFDWNLRIFFKKMAEEEQTDAGDFKKFDEEVEDDEAKYKEMLEETEKT DEGRAEERQSVQKEVEEESRLPERTETKRKETEKDAQKEKTGPRKKRRKSENIYEKCRQT FRKIKCTILRLCDKIKALSEKKEKLSAFILDDIHKTAFTKVKKEALRLLGRLKPKTVKAK IHYGFEDPYRTGQVLAGLSILYPFMGKQTEIVPDFEQKILEGTLLIRGKVHILHFFLLLW NLFWCREVRATYKHARSFEL >gi|224461045|gb|GG657759.1| GENE 233 234220 - 234543 459 107 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00952 NR:ns ## KEGG: EUBELI_00952 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 100 12 115 125 63 30.0 2e-09 MKYYRHMYFTEGLEKKKDKIIKKLENKKFQVSIHLLVLPRNENNQLEIINSVLLLQPDYP KEDYFVVGIAKSYDDALELVEKIAKEVYHETKGTDIRSYILEKEQED >gi|224461045|gb|GG657759.1| GENE 234 234578 - 236113 1700 511 aa, chain - ## HITS:1 COG:CAC0506 KEGG:ns NR:ns ## COG: CAC0506 COG0768 # Protein_GI_number: 15893797 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 55 489 10 459 482 276 36.0 9e-74 MKERKRKGYEQREADRKLKRDEEKRQMSRRDRKEANKADKHRKKAKRARNKEFARVTYAF VGLFLVLMGYIAYFNVVKSRDIIRSPYNARQDSYAKRVVRGKILDKNGNVLAQTNVAEDG SETREYPYGSMFAHVVGYSVQGKSGLESVENFELLTSNAFFLEKLKNEFQDKKNIGDNVV TTLDANLQEAAYDALGNYKGAVVALEPSTGKILAMVSKPDFDPNSVADNWESLNSSEDSV LLNRATQGQYAPGSTFKVVTALEYMREHSDYENYSYNCTGAIEHGGLTIHCFNNHVHGQV DFADSIAYSCNASFSNIGLSLDVGKFRDTAKELLFDSKLPSELPYSKSRFTLKKGASDGE KMMTAMGQGQTQVSPYHMALITSAIANGGTLMKPYLVQAVTNYGGTVVDENKPEKAGTLM TSGEAAKLKEYMTDVVQYGTASVLSGQGYTAAGKTGTAEYSSDKEKDHSWFIGMTNVDNP DLVISVIIEASDGSAKAVNVAKQVFDAYYNQ >gi|224461045|gb|GG657759.1| GENE 235 235950 - 236690 403 246 aa, chain - ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 179 259 437 469 154 41.0 2e-37 MLYVATRQPLYIVAGLGAGSVASVGAYYLFDHVRTRVIVWRDPFAAYNNGGYQVAQSLFA IGTGSWFGLGLCQGEPDMIPVADSDFIFSVISEEMGIIFALCIILICVSCYVMFLNIAMQ LHSMFYKLVALGLGTCYIFQVFLTIGGVTKFIPSTGVTLPLVSYGGSSLLSTMIMFAIIQ GLYILREDEEEDIERKKKERLRAKRSGQEIKTRRGKASDVPQRPKRSQQGRQAPEKGKAR PKQRVR >gi|224461045|gb|GG657759.1| GENE 236 236866 - 237498 894 210 aa, chain - ## HITS:1 COG:no KEGG:Closa_2234 NR:ns ## KEGG: Closa_2234 # Name: not_defined # Def: cell cycle protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 206 1 206 441 169 45.0 7e-41 MVNIIVELSKYLMIILITMYTYLCFSIFGYQDPDRKKSMLRRQNVLMYMIHIIAFLVMYL ETEDIKLLAFYLMQVVLFGATILLYTIIYPKVSRLVVNNLCMLLCIGLIMLTRLNYTNAV KQFVIAAGAIAISLAVPVIIRKFKKLAEWRKLYAAAGIVSLAVVVVLGQVSYGAKLGFTI AGINIQPSELVKIIFVFFVASSFKMSLESS >gi|224461045|gb|GG657759.1| GENE 237 237507 - 239660 1793 717 aa, chain - ## HITS:1 COG:CAC2341 KEGG:ns NR:ns ## COG: CAC2341 COG0826 # Protein_GI_number: 15895608 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 3 307 2 305 787 305 48.0 3e-82 MDNKVEILAPAGSVESLNAAVAAGADAVYMGGSRFGARAYADNPGEEELLRAVDFVHVHG RKLYLTVNTLLKDSEIDELYGYLLPYYRQGIDGIIVQDIGVAEYIRSYFPDLPLHASTQM TITGAAGAAFMKRQGVMRVVPARELSLAEVAAIKRETGLEVECFVHGALCYCYSGQCLLS SLLGGRSGNRGQCAQPCRLAYSIGDGRPADLMSLKDLCAIDLIPELIEAGIDSFKIEGRM KQPDYVYTVVSMYRAYADLYYEKGREGFAVDTRDRERLYTAYRRRGYCDGYYKRHNGKDM ISFSRPQGKEEPPQRRTFEIQEKINGNLILSPGNRAKLELEHKGSKTVCEGMAPEQALKQ PLSAERIEKQMRKTGGTQFVFDRLDIRMDGELFLPMQALNELRREGLGRLEESLLSPYRR TEDEAAHFTPDEEGRAVVQKSETDRPAVMAVSVMNAEQLKAAVSAEEIRAIYVDSGMLMP AVEETLRSLVQKAGESGKEVYAALPYIFRSPTAEKFERKYALLLEVFDGVLVRNWESCEW LEGKGYDRKIISDANIYVFNRYAKQFLKKTRIESYTAPAELNAGELKELGVSDCTFVAYG YQPVMVTAGCVQKTTGRCTHSDGLTYIKDRYQKKFAVKNCCEYCYNIIYNSSPLVLLNQR KEINSLSPASIRLDFTTEDAKEMQKITALYTDAFIKEKDIRTPDMDFTKGHFKRGVK >gi|224461045|gb|GG657759.1| GENE 238 239825 - 240238 554 137 aa, chain - ## HITS:1 COG:no KEGG:bpr_I1647 NR:ns ## KEGG: bpr_I1647 # Name: zapA # Def: cell division protein ZapA # Organism: B.proteoclasticus # Pathway: not_defined # 3 137 2 136 137 115 56.0 5e-25 MASSKNFTEVLIGGKVFTLSGFESEEYLQKVSTYLNHKIEECSSSEGYRKQSAETRSVLL ALNIADDYFKAKKQGGTLESDIEAKDKEMYDLKHELISVQIKLENAEKTMDKLKEENKEL QMKIVQLETEMKNNHKK >gi|224461045|gb|GG657759.1| GENE 239 240305 - 241312 1295 335 aa, chain - ## HITS:1 COG:BS_ruvBm KEGG:ns NR:ns ## COG: BS_ruvBm COG2255 # Protein_GI_number: 16081161 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Bacillus subtilis # 1 326 3 328 336 425 65.0 1e-119 MSKRIITTENLEEDIKIENNLRPQLLTDYIGQEKAKETLKIYIEAAKERGEALDHVLFYG PPGLGKTTLAGIIANEMNVNMKITSGPAIEKPGEMAAILNNLQEGDVLFVDEIHRLNRQV EEVLYPAMEDFAIDIMIGKGATARSIRLDLPRFTLVGATTRAGMLTAPLRDRFGVVNRLE FYTAGELKTIILRSAQVLEVGIDERGADALARRSRGTPRLANRLLKRVRDFAQVKYDGYI TEEVANYALDLLDVDKEGLDQTDRGLLLTMIDKFQGGPVGLDTLAAAVGEDAGTIEDVYE PYLLKNGFIQRTPRGRVVTEAACRHLGISMENNEK >gi|224461045|gb|GG657759.1| GENE 240 241327 - 241944 730 205 aa, chain - ## HITS:1 COG:CAC2285 KEGG:ns NR:ns ## COG: CAC2285 COG0632 # Protein_GI_number: 15895553 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Clostridium acetobutylicum # 1 204 1 200 201 138 37.0 6e-33 MISYIRGELAAVEEDKVIVDVGGVGYGIYMSGQSMSLLPSAGREVKIHTYLNVKEDAMQL FGFLTRDDLDIFRLIIGVNGIGPKGGLGILSALSPDDLRFAVISNDVKAIQAAPGIGKKT AEKLILELKDKLRIEDVLEHAAHGSENTSAAAAASVNEVQSEAVQALVALGYGSTESLKA VKQVEIAEHMEVEDVLKSALKHMMF >gi|224461045|gb|GG657759.1| GENE 241 241953 - 242444 703 163 aa, chain - ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 4 158 6 163 180 102 41.0 2e-22 MKNRVAYFGVFTALALIFSYVETLIPFHIGIPGVKLGLANLIIVVALYKMSLKETYLLSV VRVVLSGFIFGNYFSIIYSLAGGLLSLTVMALLKKKGGFSILGISIAGGVCHNIGQLVIA MAVVETFSVIYYIPVLLIAGLITGLLIGIAADGMLKRLVNIIF >gi|224461045|gb|GG657759.1| GENE 242 242457 - 242822 493 121 aa, chain - ## HITS:1 COG:L178600 KEGG:ns NR:ns ## COG: L178600 COG5341 # Protein_GI_number: 15673322 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 115 14 129 135 65 29.0 2e-11 MKLKKKDWILILIIVCVAGGAFLFHQVVGGRGANCVTVKVNGEIEGTYSLSEDREVSING GTNILQIKNGKASMISADCPDQLCVHQKAVSMNHENIICLPNKVVVEVESSEESEFDAVT N >gi|224461045|gb|GG657759.1| GENE 243 243024 - 244007 1126 327 aa, chain + ## HITS:1 COG:CAC2766 KEGG:ns NR:ns ## COG: CAC2766 COG1477 # Protein_GI_number: 15896021 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Clostridium acetobutylicum # 39 319 15 298 319 209 40.0 7e-54 MKYKKFTALATAAMLLMTGCSGLPKERDSQTYTDTLFDTVISVQILDSVDEDVLKGCETL CKKYDAMFSRTNEDSEISRINSAGGVPVEVSDETVKLIKKGIYYSELSGGAFDITIAPVV NLWDFQAEDPVPPSPEDAAAAAGHVNYKNIVISDNKVSLSDPEAGIDLGAIAKGYIADRL KDYLEKQGVKHALINLGGNVLALGTKLDGSDYNIGIQKPFDESGNPVTSVRISDQSVVTS GIYQRYFKKDGTIYHHILDPATGYPCKNNLYSVTIITDSSLTADALSTTCFLLGYDRGMK LIDQLDNVDAVFITDDNEIHYSSNFQK >gi|224461045|gb|GG657759.1| GENE 244 244109 - 244633 584 174 aa, chain - ## HITS:1 COG:no KEGG:BBR47_44420 NR:ns ## KEGG: BBR47_44420 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 102 169 10 77 82 76 47.0 5e-13 MENNFDNAPENTNEEANSQKEENTGAHGTNPQSTQYTYTDPNEGYSQNSTYGQDAAPGQY GYNGNSSSQNSRGSYQDNYNYNVGNNEGYNTNYDTGMDQSPMSMGDWLLTILIMTFIPCV GIILYFVWAFGKNGNINRRNYCRAYLIIMGIAVLLAIIFLFIFGVASIGTYRYY >gi|224461045|gb|GG657759.1| GENE 245 244763 - 245554 894 263 aa, chain - ## HITS:1 COG:MA0664 KEGG:ns NR:ns ## COG: MA0664 COG2878 # Protein_GI_number: 20089551 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Methanosarcina acetivorans str.C2A # 6 262 5 261 264 192 46.0 5e-49 MSVTGIIMAAVIVGGTGLFIGVFLGIAGKKFAVEVDEREEAIMGVLPGNNCGGCGYAGCS GLAAAIVKGEAEVGGCPVGGAPVAAKIGEIMGQEAGEQVHQVAFVKCAGTCEKAKQDYEY HGVNDCIMVNMMQNGGPKSCNYGCLGEGSCVKACPFDAIHVIDGVAVVDKEACKACGKCI AACPKRLIELVPYDQKHLVQCSSKDKGKDVMKACSVGCIGCKMCEKVCQFDAVKVVDNIA YIDSEKCTNCGACAEKCPKKIIL >gi|224461045|gb|GG657759.1| GENE 246 245567 - 246157 840 196 aa, chain - ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 19 195 21 192 194 172 58.0 4e-43 MRELLIIAIGSALVNNVVLSQFLGICPFLGVSKKVETAAGMGGAVIFVITIASFVTSLIY KFILANEAIMGGKLVYLQTIVFILVIACLVQFVEMFLKKAIPSLYQALGVYLPLITTNCA VLGVALTNVQKEYSVLQGVINGIGTSAGFALAIVIMAGIREKIEYNDVSESFQGTPIVLI TASLMAIAFFGFSGLI >gi|224461045|gb|GG657759.1| GENE 247 246174 - 246902 789 242 aa, chain - ## HITS:1 COG:TM0247 KEGG:ns NR:ns ## COG: TM0247 COG4660 # Protein_GI_number: 15643019 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Thermotoga maritima # 11 212 10 200 200 198 51.0 6e-51 MNKCTERVYNGLVKENPTFVLMLGMCPTLAVTTSAINGVGMGLSTTVVLVLSNMLISMLR KIIPDSVRMPAFIVIVASFVTIVQFLLEGFVPSLYDSLGIYIPLIVVNCIILGRAESYAS KNPVLPSIFDGIGMGLGFTVGLTAIGVVREIIGAGKAFGFQLLPLADSSVGKAGYVPVTI FILAPGAFLVLAGLTALQNKVKNNAARKGKKQVETVSCGEGCASCTNSACGGKVFPTGNE KE >gi|224461045|gb|GG657759.1| GENE 248 246917 - 247501 828 194 aa, chain - ## HITS:1 COG:PA3493 KEGG:ns NR:ns ## COG: PA3493 COG4659 # Protein_GI_number: 15598689 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Pseudomonas aeruginosa # 4 190 9 197 214 79 33.0 5e-15 MNKIVKNAIILTIITLVSGIGLGFVYEITKEPIAQAQDAAKKEAWQQVFPEASADDFKET DVDMKAADKAVKDLGVKATIDEVCEVQGGEAGYIVTATDKEGYGGDIKITVGIKNDGTVS GISILSISETAGLGMRATEPAFYKQYEGKQTDRFVVSKDGGDGEPIDALSGATITSRAVT GAVNAALGYYQNAF >gi|224461045|gb|GG657759.1| GENE 249 247501 - 248448 954 315 aa, chain - ## HITS:1 COG:TM0245 KEGG:ns NR:ns ## COG: TM0245 COG4658 # Protein_GI_number: 15643017 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Thermotoga maritima # 10 311 8 315 318 185 42.0 9e-47 MENNIKMSSSPHIRSKVTSANIMLCVTIALLPASAFGVWNFGLPAFIMLLSTTVSAVLTE YIYEKLMHRKVTINDFSAVVTGLLLGLNMPASAPWWMGALGSVFGILVVKQLFGGLGQNF MNPALGARCFLLISFTGQMTTFIYDGVTGPTPLALLKSGQSVDSMKMLVGTIPGTIGETS VIAIIIGAIFLILIGAIDLRIPGTYIVTFVIFIGIFGQFSNANVGFFDVQYITAHLCGGG LMLGAWFMATDYVTSPITKRGQLVYGAMLGILTGLFRLFGGSAEGVSYAIIISNLFVPLI EKVTLPKPFGKGGEK >gi|224461045|gb|GG657759.1| GENE 250 248479 - 249798 1489 439 aa, chain - ## HITS:1 COG:FN1596 KEGG:ns NR:ns ## COG: FN1596 COG4656 # Protein_GI_number: 19704917 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Fusobacterium nucleatum # 1 437 7 441 441 347 43.0 3e-95 MALLTFKGGVHPDDGKSLAKDKAIVEVKPKGDLVYPVSQHIGAPASPIVEVGERVLKGQK IAEAGGFVSAPVYSSVSGTVKAIEPHLNPTGATVNCVVVENDGEYEEAEYKPAKPLDEMT KEDILNAIGEAGVVGMGGAGFPTRVKLSPKEPDKIDYIIANCAECEPYITADYRRMLETP EKLVGGMKIVLKLFDNAKGIFGVEDNKPDCIEKLRELTKDEPRMEVLALKTKYPQGGERQ LIYATTGRAINSAMLPADAGCVVDNVETMINIYQAVAEGRPSIDRVVTVSGDAVNEPGNF KVLFGTNQAELVEAAGGFKEEPEKVISGGPMMGFSMFTLDVPITKTNSSILCLTKDEVAK YEPTACINCGRCVEACPSRLIPSRLADYAEHHDEEAFTKQEGLECMECGSCSYVCPAKRP LKQSIGSMRKIAMANRKKK >gi|224461045|gb|GG657759.1| GENE 251 249979 - 251109 1143 376 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227872165|ref|ZP_03990534.1| possible ribosomal protein S1 [Oribacterium sinus F0268] # 1 363 1 358 367 444 60 1e-123 MSELTFEQMLEESFKTIRNGEVVDGTVIDVKPDEIILNIGYKADGIITRSEYTNEPNVDL TTMVSVGDEMTAKVLKVNDGEGQVLLTYKRLAAEKGNERLKEAYENKEVLKAPVAQILGG GLSVVIEEARVFIPASLVSDTYEKDLSKYQDQEIEFVISEFNPRRNRVIGDRRQLLVAAR AEKQKELFEKLQIGDTVEGTVKNVTDFGAFIDLGGVDGLLHISEMSWGRVENPKKVFQVG DIVKVLIKDINDTKIALSLKFPETNPWANASDDYAVGTSITGRVARMTDFGAFVELAPGV DALLHVSQISRAHVDKPSDVLSVGQEITAKIVDLNEAEKKISLSMKALEPDTPVQESVED VADDASETYEDTTTEQ >gi|224461045|gb|GG657759.1| GENE 252 251090 - 251947 558 285 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 277 1 269 632 219 42 1e-110 MKIELAKTAGFCFGVKRAVETVYEQIRLHEGEKIYTYGPIIHNEEVIKDMKLHGVEVLET EEELDGLKDGTVIIRSHGVPRSVCDRLDKKGIGYVDATCPFVKKIHNIVMEESRKGAHII IIGNSAHPEVEGIKGWAGDKVTVVQNAEEAERFCIEDKECRICVVSQTTFNYNKFKDLVE IIVKKGYDIIVLNTICNATKERQEEARDIADRVEAMLVIGDRRSSNTQKLFEICSDACKD TYYIQTLDDLDMNQLRSVETVGITAGASTPNKIIEEVQNNVGINF >gi|224461045|gb|GG657759.1| GENE 253 251965 - 252621 265 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 5 215 37 281 863 106 31 4e-21 MGYKIAIDGPAGAGKSTIAKLVANKKGFIYVDTGAMYRGLAVHFLDRGIVPDDRERIVRA CEDADVTIRYENGVQQVYLNGKNITSRLRTEEAGNMASVSSAIPEVRAKLLELQRSLAED QNVIMDGRDIGTCVLPDADLKVFLTASVDTRARRRYEELKEKGTACRLEEIAADIEARDL RDTTRETAPLKQAEDAVLIDSSNMSIEEVVDAIVRLCS >gi|224461045|gb|GG657759.1| GENE 254 252657 - 253886 1056 409 aa, chain - ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 17 408 3 391 393 426 53.0 1e-119 MSKVLIAGGGAAGMCAAAAAAENGHEVHIYEKNDRLGRKLFITGKGRCNITNACDMEGLF DAVVSNSKFLYSSFYSFTNEDVISFFERIGVKTKVERGDRVFPASDHSSDVIRGLEREME RLGVHIHLSTAVRQIKAADGRFEKIVTDGGREVPGDVCIVATGGLSYQATGSTGDGLRFA ENLGHTVTECMPSLVPMECKEEWVKELQGLSLRNVRAAVYDGRKKLYEDFGEMLFTHYGV SGPLMLTASSYVGKKLKQKELQLLIDLKPALSEEQLDQRVLRDFEENRNRQFKNAVGRLF PAKLVPVMIKLSSIDAEKKVNTITKEERRQFAGLIKHLPVTLTGLRDYREAIITRGGVSV KEVDPGTMESKLVKGICFCGEVLDLDALTGGFNLQIAWSTGHAAGAGIV >gi|224461045|gb|GG657759.1| GENE 255 253889 - 254812 1144 307 aa, chain - ## HITS:1 COG:CAC1850 KEGG:ns NR:ns ## COG: CAC1850 COG1737 # Protein_GI_number: 15895125 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 4 285 5 285 293 276 51.0 5e-74 MGSKNELLQKIDEKYAKFSKGQKKLAGFIREDYDKAAFLTAARMGEEVGVSESTVVRFAT ALGYDGYPGFQKALGELVRTKLNSIQRMEVTYGRISQGEILNTVLQSDIEKIKLTMGSID HETFEMAVDTILNARRIYVIGIRSCAPLASFLSFYLNLICPDVKAVNTNSSSEIFEQLIR ISEEDVIIGISFPRYSMRTLKALEFASNRKAKVITLTDSIHSPMNLYSSCNLIARSDMAS IVDSLVAPLSVVNALVVALCMKKQDEVITTLETLEKIWDEYQVYSKDELNMVNNKMELSG SEETGKE >gi|224461045|gb|GG657759.1| GENE 256 254779 - 254847 100 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRNIEKEDYGTWEAKMSYCRK >gi|224461045|gb|GG657759.1| GENE 257 254948 - 256363 1663 471 aa, chain - ## HITS:1 COG:FN1376 KEGG:ns NR:ns ## COG: FN1376 COG5016 # Protein_GI_number: 19704711 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Fusobacterium nucleatum # 9 454 4 448 448 533 57.0 1e-151 MADIEKKPIKITETILRDAHQSLIATRMTTEQMLPIVDKMDKVGYHSVECWGGATFDASL RFLKEDPWDRLRKFRDGFKNTKLQMLFRGQNILGYRPYADDVVEYFVQKSVSNGIDIIRI FDCLNDLRNLQTAVTAANKEKAEAQVALSYTLGDAYTLEYWVDIAKRIEEMGANSICIKD MAGLLVPYKATELIGALKEAVDLPIQLHTHYTSGVASMTYLKAVEAGVDVIDTAMSPFAL GTSQPATEVMVETFKGTPYDTGFDQNLLAEIADYFRPIRDEALTSGLLNPKNMGVNIKTL LYQVPGGMLSNLTSQLKEQGAEDKYYDVLEEVPRVRKDLGEPPLVTPSSQIVGTQAVFNV LMGERYKMATKETKDVLSGKYGATVKPFNEDVRKKVLGDDAEIITCRPADLIPDELDTLR SEMAQWSQQDEDVLTYALFPQVATDFFKYREAQQTKVDQTMADTENGSYPV >gi|224461045|gb|GG657759.1| GENE 258 256402 - 257553 1376 383 aa, chain - ## HITS:1 COG:PAB1772 KEGG:ns NR:ns ## COG: PAB1772 COG1883 # Protein_GI_number: 14521092 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Pyrococcus abyssi # 8 381 7 400 400 352 55.0 7e-97 MDYITTTLGNLVHQTAFFSLTWGNVIMIAVACAFLYLAIRHGFEPLLLVPIAFGMLLVNI YPDIMLHAEDAANGTGGLLYYFYKLDEWAILPSLIFLGVGALTDFGPLIANPKSFLLGAA AQFGIFTAYLGAMALGFSDKAAAAVSIIGGADGPTSIFLAGKLQQTAIMGPIAVAAYSYM ALVPIIQPPIMKLLTTEKERKIKMEQLRPVSKLERILFPIIVTIVVCSILPTTAPLVGML MLGNLFRESGVVRQLSETASNALMYIVVILLGTSVGATTSAEAFLNWDTIKIVVLGLVAF MFGTAAGVLFGKLMCLATRGKVNPLIGSAGVSAVPMAARVSQKVGAEADPTNFLLMHAMG PNVAGVIGTAVAAGTFMAIFGVM >gi|224461045|gb|GG657759.1| GENE 259 257603 - 257980 450 125 aa, chain - ## HITS:1 COG:SPy1176 KEGG:ns NR:ns ## COG: SPy1176 COG0511 # Protein_GI_number: 15675148 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 124 1 116 116 63 41.0 6e-11 MKNYTITVNGNVYDVTVEEKGAGAAPAAPAAAAAAPKAAPAAPKAAPKAASAGAGSIQVK AGAAGKVFKIEANVGQSVKKGDAVVIIEAMKMEIPVVAPEDGTVASIDAAVGDAVEAGAV LATLN >gi|224461045|gb|GG657759.1| GENE 260 258009 - 258764 750 251 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00921 NR:ns ## KEGG: EUBELI_00921 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 77 244 87 257 263 99 42.0 1e-19 MLAAVLCFTGCGSKQNSDVEYDKASMEQVTDFLIDYCANADEETTEQWNGMSEFAMEQQF VSAGLPFTPDSFLSAMDAWKAGIEECGDYAGHGDYKYEPSRTELKITTTAEFEKRNADLT FVFKADTRGNLNLDSMTVAGKYTMGEILEKAGLNTVLGMGTVFVVLIFISLIISLFRFIP ALQNAFGRKPEKTTEAPAAVEDAPVIVDAAAETDDMELVAVISAAVAAAEGTTTDGFVVR SIRRRPSNKWN >gi|224461045|gb|GG657759.1| GENE 261 258809 - 260248 1472 479 aa, chain - ## HITS:1 COG:TM0716 KEGG:ns NR:ns ## COG: TM0716 COG4799 # Protein_GI_number: 15643479 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Thermotoga maritima # 10 479 37 513 515 367 42.0 1e-101 MDNMATGSAAGNRIEALLDAGSFVEIGGAVTARTTDFNMQEKETPADGVITGYGVIDGNL VYVYSQDASVLNGAIGEMHAKKIANIYDMAMKMGAPVIGLVDCAGLRLQEATDALEAFGN LYLKQTMASGVIPQITAVFGTCGGGLAVVPALTDFTFMEGKSGKLFINSPNAIPGNEISK CDTSSAQFQSEKAGLVDDIGTEEEILGSIRSLVCMLPCNNEEDASYDECADDLNRACTGI ENAAEDTAIALAQISDSNIFFETKKHYAKDMVTGFIRLNGMTVGAVANRSKVYNADAEVT DEFDGSLSAGGAGKAAEFVKFCDAFNIPVLTLTNVSGFEASECAEKNLAREAARLTYAFA DATVPKVNVIIGKAYGSAYVTMNSKALGADMVYAWQDAEIGMMDASLAAKIMYAGADADV IKEKASEYKEIQSSPLAAARRGYVDTIIAPADTRKYVIGALEMLFTKREDRPVKKHGTV >gi|224461045|gb|GG657759.1| GENE 262 260411 - 261172 916 253 aa, chain - ## HITS:1 COG:BS_yxdL KEGG:ns NR:ns ## COG: BS_yxdL COG1136 # Protein_GI_number: 16081015 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Bacillus subtilis # 5 248 4 240 257 218 44.0 7e-57 MSEKIIETKELVHNYKVETRKSVEINEIHVLKGIDFAVEQGEFVGIMGKSGCGKTTFLKL LGMLERPTGGSVIFKGMDTEELWKDELADIRRRQIGFVFQDFYLMDSLSVMDNIKLPMIL DKAEPEVMKEKTEELAKQFGIGELLYKAPYELSGGEKQRAAICRALINDPEIVLADEPTG NLDSRSGQVVIEALCRINEELGKTVVMVTHDSRLASYCKRIILLKDGEIVDTIRREESQD AFYHQILDKTTEL >gi|224461045|gb|GG657759.1| GENE 263 261173 - 263707 1920 844 aa, chain - ## HITS:1 COG:BH2698 KEGG:ns NR:ns ## COG: BH2698 COG0577 # Protein_GI_number: 15615261 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus halodurans # 178 463 3 295 522 62 21.0 3e-09 MKKQREKIEGKWFSFIACLLAVTGAFLLPWADVGVKEYTLYGFFKAVYAAGGIAEYAPDG GNIYASYAVSYLALAAVLLAVVHEVLLLCSRRNRILNAGMYACTFIYFTGYTIFGGYDAG PALFAFVAVIGIEFLVVLYLEQSKEINENYRLMKKRERREREERIRRLHFPGRYPREFYA VIWDNFKYRWKNYVLFILSGVLSAAFLTAAIGMNYILHSVHSVEDIVLGTGLQQILIRAV GLILFLTIFLTAFVFSYYIKSRMSDYRMFTVLGIRSRTLSVIMAAEYAGSLLISFIAGVA AGTGILLYMRHLLIKKLGPDVTVSDISPVIFLFALAGYIIVLMIATAINYESYLRVRDSF AAVKDVVSEKIPGRFLIPAALLGLEFIRSSIFDYSDTSMWTVISFILGLYLVISYGKAFL MKCIDKSDRYYYRHLLEKIPFYYRFKKNCRYLVMLTAIHLLALGVFLIQLCGNLIAEPAE KLCPYDFVLMMHEGDEDTVADIEQKYGARADIVPMLRVTSPTGNSFDFMASLIMFAPPGQ NAGISESTYRKLYEARRLPEPPALGLKDDEIYLVFQQDSSFKVRPIDVSAGAELANPYLK LGQPDGEGEYKQWKVKDYECQILTGMLQRGSQENLVVFSDDYFNGAYAKTEEGIKNLCLI NVPEEHYKDVDRELETLREQHIGDESYDYDIRVFYGSRQTVRDIVSERYTKEVVYAFVIL MLAACACFLTYIKFSFEADDICRRYGFYDSMGMHERGQMKTIKKEMWPFAAVPLFISTVT AAIFTYSVFRLRTYGSSQTMDYMKTGGTMAAVYLVIQTAWMAWLVFQMKRRIRKSRINVG RQEV >gi|224461045|gb|GG657759.1| GENE 264 263865 - 264596 312 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 201 1 199 223 124 33 2e-26 MSTILKAEELVKTYNTEQGPVLKGISLCVEEEEFIAVMGRSGCGKTTLLKILGLMDEPTE GKLYVKGRETATLWEEELSDIRRKGMGFVFQDYNLMDSLTVEENIMLPAILDKMEPGRRK EKMERLTAQFGISHLTKKYPYQMSGGERQRAALCRALMNDPDLILADEPTGNLDSAMGEE VIQWFRRLNEEWHKTVIIVTHDPKIACRCKKVLLLKDGLLIRELDRGTAGGFYEEILEST AGL >gi|224461045|gb|GG657759.1| GENE 265 264599 - 267250 1791 883 aa, chain - ## HITS:1 COG:no KEGG:CLM_3579 NR:ns ## KEGG: CLM_3579 # Name: not_defined # Def: putative ABC transporter permease # Organism: C.botulinum_A2 # Pathway: not_defined # 95 878 82 829 831 213 26.0 5e-53 MKKENGNRSKNSKKKCGLRSEGRLLGIGTSVVFVASVLCLKWLTFAGKRYTLPLFLKAVY ASGGLPEYFSRVTVTAREAVTKDSAYAQFLPSYFLLYVAAAAAALSILRIVLLLFGKNPR FLRYIIYGMTLTVFLVLVTFGGYLPDDGLIVSVIAVGIDSLGHVYLEQRKQIRDEAEALK REEQEKKEEKKRRKHFPGRYDRGFYHVVWRNFVHNRKSYFLFILGAGGVVTILHTLLGVQ YGLKAGGAGIGTGYGNGMQRILGEILPVAACISVLILALIITHYLRTRMHNYSIFYSLGI RKNTLRLIIALEYTVCLLFAYFAGLFLAASVLFLAGKTLLADITGSRPWSAGGWKTAAAT AGIYGAAVLVSSLINYHLFGHESLFKLSTRRQEAEKMPHRFLVPGIAAGTAVTVSAAVRY WLPPEAEKFSANIWMLIGSFVLFYFLHARTAAYSSRRSETQGERLLSILPWRYRFKTNYR FWYLLFALHLLSGMIYIPEYAAVEAAGSAAGLYPYDFVCMSYEEDEDYFSDLSATCDVEI HTWPMLRCTTPLGAPYTWKQAAANQYMGVLWPQGQHIAVPETCYRELKRAVGEPVGKSLE LEENEVHVVFQQDTSVKSHPLEWYIGDREPRFRIGQPVRSYDFMERETLFPQYVMKSSER SILTGMFQQGQQENIVVLSDHVFDGFFRGGGGKEGPTRLKLIKCGGDDYEIIEQKLQTYA KRHKNDASWDDRIQPYYAKQTAAAETKAEHHFKKAACLAVLAGLLTGSFFIFFIKYGLEQ EELAKKFSQLKSIGMPEKERRRLLVREMAKIVWGSYVPAVLLSISFICAVAAKRMYTAWE LAVYVKYLCILFLCYTLLYAVVTAILGTCYIRAVLGGRRRQRR >gi|224461045|gb|GG657759.1| GENE 266 267322 - 268059 702 245 aa, chain + ## HITS:1 COG:CC2672 KEGG:ns NR:ns ## COG: CC2672 COG1228 # Protein_GI_number: 16126907 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Caulobacter vibrioides # 23 230 235 426 429 92 32.0 6e-19 MPAARIAIPTIPTITKHAILSRIEAAVDECHRRGIKCGVHAGTNPGIQMSIDAGFDTIEH ATFMTLDHAKQMAEKGIAWTPTIMAYTLLYDICKENLEKNANAPVNDPVMQKEMKDYQYF EPAYKAYKEHFKELYDTGVTVIAGTDMVMYQSPLLPLPRELQYMVEYGITPAQAIQTATS NPAKVLGVEKERGLVKEGLDADLLVVGGDLSKDITCLNDVKLVTLGGRKVFENGIRYVGT NNMFM >gi|224461045|gb|GG657759.1| GENE 267 268288 - 268437 67 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKPIYSVDPLRLAPGGSHTLSDLELCGVTGEGKAAGCCEPLEGALSSR >gi|224461045|gb|GG657759.1| GENE 268 268790 - 270778 1925 662 aa, chain - ## HITS:1 COG:CAC0273 KEGG:ns NR:ns ## COG: CAC0273 COG0119 # Protein_GI_number: 15893565 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Clostridium acetobutylicum # 10 548 5 554 558 580 52.0 1e-165 MKNFEKYERQYFMPPEVTYDWVKKEYVDRPPIWCSVDLRDGNQALIEPMSLEEKLEFFQM LVDIGFKEIEVGFPAASETEYQFMRTLIEKDMIPDDVTVQVLTQAREHIIKKTFEAVKGA PHAVIHLYNSTSVAQREQVFKKSREQIKKIAVDGAKLLKELADETEGNFTFQYSPESFPG TEVDYAVDVCNAVLDVWKPTADNKAIINIPTTVENAMPHVFACQLEYVHKHLNYRDNVIL CLHPHNDRGSGVATAEMGMLAGADRIEGTLFGNGERTGNVDIITLAMNMYSHGVDPGLDF SNMGEIREKYEQLTRMRVYERQPYAGDLVFTAFSGSHQDAIAKGMAWKDDGKSGKWTVPY LPIDPQDVGRRYDSDVIRINSQSGKGGVNYILKQSYGINLPEKMREEVGYLVKDVSDKAH KELTPDWVYQIFSDNYVNTKPVFHIDECHFKQVDGITAETTINHNGESRVITAMGNGRLD AVSNAIKQYFNISYELTFYEEHSLTKGSSSKAVAYVGIICNGKALWGVGIDADIISASIE ALTVAVNKIEAIGSSDTCKDARMIEILNYIQANYIDITLDDLSEKFFLSKPYLSKYIKEK SGMTFGDLVKKIRMKKARALLKSSNMTVENIALSVGYQNVEHFNRLFKKAYNITPIQFRN QK >gi|224461045|gb|GG657759.1| GENE 269 270992 - 272521 1770 509 aa, chain - ## HITS:1 COG:BH0660 KEGG:ns NR:ns ## COG: BH0660 COG0591 # Protein_GI_number: 15613223 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Bacillus halodurans # 5 499 6 498 501 160 27.0 7e-39 MGIKLTLLIVFFAVMVVVGLYSRKHATSVDGFVLGGRSVGPWLTAFAYGTSYFSAVVFVG YAGQFGWKYGLSSTWIGIGNALIGSLLAWVVLGRRTKVMSQHLKSKTMPDFFGERYSSKA LKIAASAIVFIFLVPYTASIYNGLSRLFEMAFNIPYTYCVVVMAVFTGIYVILGGYMATA INDFIQGIIMLIGIAAVIAAVLSGQGGFIEAVRKMAEIPSDVPVTMGQPGAFTSFFGPDP INLLGVVILTSLGTWGLPQMIGKFYAIKDEKAINTGTVISTLFACVVAGGSYFLGGFGRL FDGSAIYDKTGNVVFDSIVPHMLSTLPDVLIGVVVVLVLSASMSTLASLVLTSSSTLTLD FLKDNVMKNMSEKKQVRTMQLLIVFFIAVSVVIALDPPTFIAQLMGISWGALAGAFLAPF LYGLYWRGVTKAAVWASFAAGVGITVSNMFLHYIASPINAGAAAMIAGLVIVPVVSIVTP KLGKEHVDEIFTCYEEKVTITKKRSLEAN >gi|224461045|gb|GG657759.1| GENE 270 272745 - 273221 676 158 aa, chain - ## HITS:1 COG:CAC1604 KEGG:ns NR:ns ## COG: CAC1604 COG1803 # Protein_GI_number: 15894882 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Clostridium acetobutylicum # 15 151 9 145 149 186 63.0 2e-47 MLEENYVTFEIGKAKHIALVAHDGKKKELVDWCDKNKDVLKNHFLCGTGTTARLIAERTG LPVKGYNSGPLGGDQQIGAKIVEGQIDFMIFLWDPLEAQPHDPDVKALLRIAVVYDIPIA NNLATADFMLNSKYMTEVYSRKVENFNKTIQDRVEKMK >gi|224461045|gb|GG657759.1| GENE 271 273247 - 274815 1579 522 aa, chain - ## HITS:1 COG:no KEGG:CLM_3549 NR:ns ## KEGG: CLM_3549 # Name: not_defined # Def: ABC transporter permease # Organism: C.botulinum_A2 # Pathway: not_defined # 1 519 1 521 523 136 26.0 2e-30 MDALMYLTKRTFSNRLRKAMKKPLTYIYIVLIGAYIVMILVGWGILARSGGVDSVNSLVY ILTVWLYIAVCSNFISYAKLKGVIFKPSHSHYIFPAPVSPKKILLYGAAKNFIINLVIDV AIALAGVTIFHLSVWRAFLLYFVMFVCETVFEASLIIFLYAKEKRFEPLVKIICKSIYVL IGVIAAIVLLFIKKNGFSAAAAEGIFNLPALQLVPVAGWCVASVRLVILGPETVNVIGSV LFFLSCAGMFFAAFRMKCSGAYYEDAAKFADDYAEMKSRSKKGEVVLSVGRKKKFKKAGM HYQGSGAKAIFYRQLLEYKKEKFFIFGAMTLYSIIGAAICVFVIDKPEKIPPGLSLLGVM AYLIFLTTGYLGKWNKELANPYIYLIPDKPMKKLWYATAMEHVKSLADGIVLAVPVGIAW HIPVYQIIMCILIYCVLQANRLYIKILGESILGSTLGSTGKNLFAMAVQGGILGAGIGLA ALMGFLINYNFVFPIMLIYSMMITVLIALLTVGRFETMEQWD >gi|224461045|gb|GG657759.1| GENE 272 274815 - 275510 224 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 2 206 12 222 312 90 32 3e-16 MLAIQNLSKSYGKVLAVDQVSFFVPDGRVGILLGPNGAGKSTIIKSIAGLLRYNGEIQIQ GIPAKTLDAKRCFAYVPEIPNMFEALTVREHIEYIRHAYNSGITDGEIEEMLRRYEMEDK QDKLGNELSKGMMQKVSICCALAIKPKVILLDEPMVGLDPKAIKELKETVLELREQGVTV LISTHMLEMVEDLWDVMFVMEKSHIIGSYTKEEVGGKDLDDLFFELTGGKR >gi|224461045|gb|GG657759.1| GENE 273 275639 - 276439 745 266 aa, chain - ## HITS:1 COG:CAC1330 KEGG:ns NR:ns ## COG: CAC1330 COG1234 # Protein_GI_number: 15894609 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Clostridium acetobutylicum # 3 266 4 267 268 290 52.0 1e-78 MKLTILGTGNAAVTECYNTCFVLSEGDRHFLVDAGGGNQILKILKDVNIRLEDIHDIFLT HEHIDHLLGLIWIIRMTGQKMNQGAYEGELRIYCHSDLAGKITTIAGLTIQKKVTKHIGG RIRFIEVEDGDSREVIGQKVTFFDIGSTKAKQFGFSMVTAEGRRITCCGDEPFNECQERY VRQSDWLMHEAFCLYSEADKFRPYEKHHSTVKEACELAEKLGVMNLILYHTEETHLPVRK KLYTEEGKQYYHGNLFVPDDKEVFEI >gi|224461045|gb|GG657759.1| GENE 274 276440 - 277321 1159 293 aa, chain - ## HITS:1 COG:CAC3342 KEGG:ns NR:ns ## COG: CAC3342 COG2084 # Protein_GI_number: 15896585 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Clostridium acetobutylicum # 4 289 7 292 292 302 52.0 5e-82 MIRKIGFIGVGIMGRSMVRNLMKAGFELHIYARKKEKVEDVIQEGALFYETIGDCVKGCD AVITIVGYPEDVEEVYFDAGNILDSAEKGAYLIDMTTTSPMLAEKIYEQGTEKGFHVLDA PVTGGDTGAREGTLSILVGGRREDHEACMPLFEAMGTNINFQGGPGSGQHCKMANQIMIA GTLSGVCEALTYAKAKGLDLPTVLKSVSTGAAGSRQLDLFGPKILEGDFAPGFFLKHFIK DMKIALTEANMSGLSLEVLSQALANYEELEAEGYGSLGTQTLIKHYEENSGER >gi|224461045|gb|GG657759.1| GENE 275 277372 - 278043 935 223 aa, chain - ## HITS:1 COG:CPn0749 KEGG:ns NR:ns ## COG: CPn0749 COG0110 # Protein_GI_number: 15618658 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Chlamydophila pneumoniae CWL029 # 9 197 8 204 208 117 34.0 1e-26 MKELTVKEMYTLEETIAKDIFDGVTYPWEVLPKIGGFIQKLGESLSSEEYDKVGDNVWIA KSAKVFESAYINGPAIIGKNAEVRHCAFIRGNAIVGEGAVVGNSTELKNVILFNKVQVPH YNYVGDSVLGYKSHMGAGSITSNVKSDKKLVVIKTPEENIETGLKKFGAMLGDEVEVGCG TVLNPGSVVGSHTNIYPLSSVRGYVPGGSIYKCRGEVVEKVED >gi|224461045|gb|GG657759.1| GENE 276 278093 - 280123 1872 676 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 641 1 587 709 367 37.0 1e-101 MGKSLYIAEKPSVAQEFAKALKLTTKRRDGYLESDDSIVTWCVGHLVTMSYPESYDEKYK RWSLQTLPFIPEEFKYEVIPSVEKQYRIVAGLLNREDVDTIYVCTDSGREGEYIYRLVEQ KADVHGKKRRRVWIDSQTEEEILRGIREAKDLKEYDNLSASAYLRAKEDYLMGINFSRLL TLKYGNSISNYLHTKYSVISVGRVMTCVLGMVVRREREIREFTETPFYRVISAAGEPGET FEGEWRAVKGSAWFESPKLYKENGFLHEEDAAGLIRELSDPLPVQCTIISIERKKEKKNP PLLFNLAELQNECSKRFKISPDETLRLVQEMYEKKLVTYPRTDARVLSTAVAKEIHKNLN GLMKYEPAVPFLGEIVSYGSHKEIARTRYVNDKQITDHYAIIPTGQGLGALKSLSAVSVK VYDVIVRRFLSIFYPPAVYQKVTIVTKIKEESFFSSFKVLAEEGYLKVAGIPGQKKSSGN EAEESDGGDSGQNTDNRFFEKIQGLKKGMVLPVQSLDIKEGKTSPPKRYNSGSLILAMEN AGQLIEDEELRAQIKGSGIGTSATRGEILKKLFNNKYLALNKKTQIVTPTLQGEMIYDVV DQSIKSLLNPELTASWEKGLTYVADGEITPDEYMTKLDHFIVSRTNGVKGLNNQYQLRSF YDRAARFYKKEKDKTK >gi|224461045|gb|GG657759.1| GENE 277 280151 - 282256 2152 701 aa, chain - ## HITS:1 COG:BH1392 KEGG:ns NR:ns ## COG: BH1392 COG0855 # Protein_GI_number: 15613955 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Bacillus halodurans # 8 677 19 696 705 496 41.0 1e-140 MENDILNYTQNRELSWLKFNKRVLEEAQDPTVPLLERMKFVAIFTSNLDEFFMIRVGSLF DMIQTDPNTIDSRSGLTPGEQLEMIFDAVAPLYKERDKTYAEIKKQLSPYGVCGLDFKEL EQSEKKYVKKYFKEQILPILSPQIVDANHPFPHLLNKEIYVTANLKYKDKSMQGIVPVPQ FVSDILYLPGHDIRYIRMEKVIMEYLNLVFEQYEVTDKNYICVTRNADIAPDDEALEVND DFRYLMKETLHKRRRMAVVRLEVAEKLSEEMEQYFCGKFAIEPNQIFRTKMPVKLAYMFA ISGNLPEAMKRSLVYPPFTPQNSPRVQEGSTMKQQIKKKDILLYYPYESMNPFLRLIKEA STDPNVLTIKITIYRLAKKARLVEYLCAAAENGKEVTVLIELRARFDEQNNIDWSERLEE AGCRVIYGFDGYKVHSKVCLITYRNRNEIQYITQIGTGNYNEKTAAMYTDLSLMTADPEI GKDASEFFKNLSISNLDGLYNRLIVAPTSLKQRVLYLMDEEIRKGSGGRIVMKMNSLTDV DFIEKVAEASRAGVKTDLIVRGICCILPGVKDHTENVTVTSIVGRYLEHPRIFSFGTGAE QKIYIGSADMMTRNTEKRVEVACPVLDEDVRRQINHYLKIMLTDNVKARVLNSDGDYEKK EPTEPLIDSQVVFMQEALNVKRKAPERRQTFLERIRHLFGK >gi|224461045|gb|GG657759.1| GENE 278 282497 - 283582 1251 361 aa, chain - ## HITS:1 COG:CAC0022 KEGG:ns NR:ns ## COG: CAC0022 COG0136 # Protein_GI_number: 15893320 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Clostridium acetobutylicum # 4 361 3 360 360 442 56.0 1e-124 MEKKLRVGILGATGMVGQRFISLLENHPWFEVVTVAASPRSAGKTYEEAVGGRWKMTTPM PEAVKSLVVANVNEVEKVAESVDFVFSAVDMTKDEIKAIEEAYAKTETPVVSNNSAHRWT PDVPMVVPEINPEHFDVIESQKKRLGTSRGFIAVKPNCSIQSYAPCLAAWREFGPKEVVV TTYQAISGAGKTFKDWPEMTENIIPYIGGEEEKSEQEPLRVLGTVENGEIVKANLPKISC QCVRVPVLNGHTAAVFINFEKKPTREQLVEKLVNFKGFPQEAGLPSAPGQFVQYLSEDDR PQVAMDVDYEKGMGVSVGRLREDTIYDFKFIGLSHNTVRGAAGGAVLCAETLVAKGFIEN K >gi|224461045|gb|GG657759.1| GENE 279 283633 - 285015 1797 460 aa, chain - ## HITS:1 COG:BH3186 KEGG:ns NR:ns ## COG: BH3186 COG0165 # Protein_GI_number: 15615748 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus halodurans # 1 457 1 456 458 504 53.0 1e-142 MAQLWGGRFTKETDRLVYSFNASISFDKRFYAQDIKGSIAHVMMLARQGILTDYEKDQIV QGLEGILDDVESGRLEISDKYEDIHSFVEATLIERIGEPGKKLHTGRSRNDQVALDMKLY TRDEVHLLDNQVEGLLHAILAIMEDNIDTYMPGFTHLQKAQPITLAHHMGAYFEMFRRDH ERLQDIYRRMNTCPLGSGALAGTTYPLDREYTARMLGFDGGPTLNSMDGVSDRDYLIELL SALSTIMMHLSRFSEEVIIWNSNEYQFVEIDDAYSTGSSIMPQKKNPDIAELVRGKTGRV YGALNAMLATMKGIPLAYNKDMQEDKEWVFDAIDTTKGCLALFTGMIRTMEFRKDRMERS ARNGFTNATDAADYLVNHGVAFRDAHGIVGQLVLTCIEKGIALDELPLKDYREISDVFEE DIYEAISLETCVNKRITTGAPGRHAMEETIALYRKYMEEY >gi|224461045|gb|GG657759.1| GENE 280 285092 - 285700 607 202 aa, chain - ## HITS:1 COG:CAC1577 KEGG:ns NR:ns ## COG: CAC1577 COG1636 # Protein_GI_number: 15894855 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 197 4 200 208 247 68.0 1e-65 MNYQKELDKLIERLKGEKKVPRLLLHSCCAPCSSYVLEYLSDCFDITVFYYNPNIYPESE YTKRILEQQTLIGEMKTRYPVSFIAGHYDRERFYEMAAGMEHLKEGGERCLKCYELRLRE AAELAQKGGFDYFTTTLSISPMKNADRLNEIGIRLEKEYGVTYLQSDFKKKNGYKRSIEL SKEFGLYRQDYCGCEFSLKNVK >gi|224461045|gb|GG657759.1| GENE 281 285761 - 286885 975 374 aa, chain - ## HITS:1 COG:PA2810 KEGG:ns NR:ns ## COG: PA2810 COG0642 # Protein_GI_number: 15598006 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 166 362 219 443 443 60 25.0 4e-09 MQLWKKNFLVTFVLFVLVVYICLFVMVTVSFRTDLGYLMRRASDSEREITYVLQSIQKLS GGHIATDAGYMAQRYEEAGILLKVRSGDAVFADKIPLQDVPKEKYCILTHDGGKYIYIKD EVTDGAGGMELTYMENIQSFYDLQNRKFIAAAASGIFVSAVVGIMLYAAMKRIYRPVNQI AHELRTPLTGIRGYAQYIMMGNITEEDRFFAAQQIVDSAGTMKDVVDKLLIMGNVREGTL TFVAIDIEVMLEELKHIYPGIELEVSIQSINGEPTLVRCLLENMISNAVNAGGRVKVTAG AEKLCVWNEGMFRVRAENELKPHGYGLAICRDIAGIHRWKLRYSTSEKDGTAAVLIWGRE KRTLAPSREMPYTE >gi|224461045|gb|GG657759.1| GENE 282 286888 - 287535 613 215 aa, chain - ## HITS:1 COG:CAC1506 KEGG:ns NR:ns ## COG: CAC1506 COG0745 # Protein_GI_number: 15894784 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 214 1 216 217 168 42.0 9e-42 MADILIVEDDKSINELIQRTLKIMGHRGLPAYTGREALKAVEEKCPALILLDISLPDMDG FEVMKRIRDVPVICVTARDEIPDRVKGLMAGAEDYIVKPFALEELSARIQVVLRREGREQ TVYKLGDTQIDIRQAVVRRRGKPVELTHREYTLLKVLLENRNIALSRNQILDLAWGMDYY GDDRTVDVHIRRLRQKLGLEKQIKTIFKYGYRLEM >gi|224461045|gb|GG657759.1| GENE 283 287558 - 288169 564 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568125|ref|ZP_03777150.1| ## NR: gi|225568125|ref|ZP_03777150.1| hypothetical protein CLOHYLEM_04198 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04198 [Clostridium hylemonae DSM 15053] # 1 203 1 203 203 380 100.0 1e-104 MKQIWKKHRVSLTAAGLVVCLTAAFGAGIVYSRSQAEKDVVKAAEKEVQKDAGEDELPRT NVPWEDDTLYKDILSDSYRDIGSEVCRKFGADYETVTMNEVTAEMRSFEEALILRKDMGA NPLLEKNEDKNAIEKDNGYSSATMSLETYMNDVYAFGGGRTVIKEICGKYGIDPDTAVIS ALTAEQLEEIGASAYDASDHPKD >gi|224461045|gb|GG657759.1| GENE 284 288319 - 289086 223 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 209 1 209 311 90 28 3e-16 MDQILELRHIHYAYHNMEGETPALIDISFSMNKGEFVAIVGPSGCGKSTLLSIISGLIEP EKGLIKINGKYLRESTTNIGYMLQHDQLFEWRTIYNNVILGLEVQHMLSARSKEKAHELL DTYGLKQFENAKPSELSGGMRQRAALVRTLILEPDILLLDEPFSALDYQTRLNVGDDIGQ IIRKEKKTAILVTHDLSEAISLADRVIILTSRPATILQTLPLKFDLEQDTPLNRRDAPEF KTYFNLIWKELNTNE >gi|224461045|gb|GG657759.1| GENE 285 289079 - 289876 809 265 aa, chain + ## HITS:1 COG:CAC0618 KEGG:ns NR:ns ## COG: CAC0618 COG0600 # Protein_GI_number: 15893906 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Clostridium acetobutylicum # 3 264 2 263 264 190 40.0 2e-48 MSELSTGQRHFLSQQKRHKRIVSVSRVLILLSFLFIWEFTANVGIIDSFIFSSPSKIALC FWGMLMDKSIFLHIGVTLYETILSFVLVIAISILMAVALWFSPKLSEILDPYLVVLNSLP KSALAPLLIVWLGANTTTIIVAGMSVAIFGSILNLYTSFTTVDPEKIKLIYTLHGSKFHA LTKVVVPSSIPAIISTMKVNIGLCLVGVIIGEFLAARDGLGYLIIYASQTFKLDWLLMSI VLLCIMAMGLYSLINLIERIYLKRV >gi|224461045|gb|GG657759.1| GENE 286 290086 - 290457 324 123 aa, chain + ## HITS:1 COG:CAC1469 KEGG:ns NR:ns ## COG: CAC1469 COG1321 # Protein_GI_number: 15894748 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Clostridium acetobutylicum # 3 122 1 121 122 115 51.0 3e-26 MKIHESAENYLETIFMLQNRKPSVRSIDIVNELGFSKPSVSVAMKNLRNNGYITMDPDGY ITLTPSGREIAEKMYERHTFLSTWLTDLGVAPDVAAKDACRIEHVISAESFSAIKRFASR ISS >gi|224461045|gb|GG657759.1| GENE 287 290454 - 292199 896 581 aa, chain - ## HITS:1 COG:CAP0015 KEGG:ns NR:ns ## COG: CAP0015 COG0584 # Protein_GI_number: 15004719 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Clostridium acetobutylicum # 307 557 20 264 281 157 34.0 4e-38 MISRASVLICFELIYKAIGISFFFPFLGNLTGRLPDLIGEAYLSQGNMVKIFQSPAAILL LSGVVLLLGGYLYFEVIALILYSEKGWNREELTLWGLIRTAVREVPGMFRPRRAASLSLL LFMPFSFFGVTSVFFRALRIPEFIMTAITDNILYVSLLLMAAVFVNCLFFLYIFGFPVLL IEKASFYDSWKKSRSLLKGKVLLTAGRVLSYTLIFASVLCIVWAAGLSIMALLVRRIEGA ADGKMLFGRYYDTYSGIWNLAGGAFISVFFCAVSITLYHRFRGDRRPDAVKRTRTVKGAA IRTAVVLVLSGFLIFMADTELGRQLFFRNDSHISVVAHRAGVVFGPENTVAALEQAVRDG ADMAEIDVQQLKDGTLVILHDTNFKRTTGVDLDVRDAVYGQVKELDAGSVFSQKYAGEPV PTLEDMLKAAKGKIQLMIELKVTGNENRLVEETLSLIEKYNMEAECNIASMDFSLLEKVK SLNSRIKTTYISVLLVSDQYDLKQVDAYSVETTFLSRQLVSEAHVQGKKVYGWTASSDKS IKKVLGCEADGIVTDNPLLVQFHLYSKDENSIKETAERIFF >gi|224461045|gb|GG657759.1| GENE 288 292391 - 294004 1518 537 aa, chain - ## HITS:1 COG:BH1407 KEGG:ns NR:ns ## COG: BH1407 COG1283 # Protein_GI_number: 15613970 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Bacillus halodurans # 3 530 12 536 543 314 36.0 3e-85 MTLLGGLALFLYGMQMMSNGLETAAGNKMKEILEKLTSNRMKGVLVGAGITAVIQSSSAT TVMVVGFVNSGLMSLNQAVWIIMGANIGTTVTGQLIALDIGAVAPLIAFAGVACILFIKN KQICHISEIFAGLGVLFIGMDMMGKAMEPLQDSEAFLHFMTTFSSPLTGIVIGAVFTAVI QSSSASVGILQALAGTGVIPLSSAVYILFGQNIGTCITAVLASIGTKTNAKRATIIHLMF NIIGTVLFTLVCMATPFVSWMEAAAAGNPVQQIANVHTTFNIVTTILLLPFGNVMARAAV RILPDKREEADEVMHLIYLSPFEPSYPVGHAAAALSEIEKEVGRMLSMARSNAAAGFDAA LNAGNASAEKIEAAEQYINFLNTEISRYIGRLMTMEMSGPDTKCINAYYVIISNIERIGD HAVNIAGYAEDMKKWGLSFSEHAQEDIRQMKRVSLETLDVLEFSKGASGREILEKTAQNE QKIDDLQQSYLKKQIKRMQSGSCRPEAGLLFSEMLTDFERIGDHALNIAELYYEMVS >gi|224461045|gb|GG657759.1| GENE 289 294019 - 296190 1973 723 aa, chain - ## HITS:1 COG:slr0774 KEGG:ns NR:ns ## COG: slr0774 COG0342 # Protein_GI_number: 16331320 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Synechocystis # 36 395 27 444 472 214 35.0 7e-55 MKNKKNHIWLALFIIAAFVLFAFFGCGNDLKGVRDMRFGIDIRGGVEAVFEPAGVKETPP ASELEAARNVMESRLDAKNITDREVTVDKKEGHIIVRFPWKSDEKEFDPESAISELGETA KLTFRDPDGKILIEGQNVKNSQPVKNTETGGYEVQLSFDGKGTKEFAEATGALTGRQLQI YMDDRLISAPVVQQQITGGEAVINGMDSIDAARALSEKINAGALPFSMETTNYNTISPAL GNNALRAMVTAAAVAFVLICIFMIVSYRLPGVISCLTLIFQMSLQILALSLPQYTLTLPG IAGLILSAGMAVDANIIISERIQEELRRGTGVRLAVKNGYKNAFSSVLDGNVTTAAVALI LMIFGSGTMLSFGYTLFTGVIINLLAGVWMSRFMLTSAVRYQVCSREQMFRRKKEQRPLH FAAGRRKIYVFTAVVLLTGAAVSGANGIRLDTQFTGGAILRYTYTGEADTKQAGAAVEKL VKRPVSTQITEDPLTGQKKLILTLAGNKGISPDEQKKVLEALGQDKEAAYTLSETSVVEP YIGAKALKNSAAAVGLSSLFIVLYIWIRFSALSGLSAGITAVIALLHDAAIVLFVFGIGK IPVNDAFVAVTLTIIGYSINDTIVLYDRIRENLARGGRKKEGLCRLVDRSITETIGRSVK TAFTTALCAAVVLVFACVYDIGSIKVFALPLLAGVISGCYSSVCIAGPLWVTWKEFRERR TKK >gi|224461045|gb|GG657759.1| GENE 290 296744 - 298483 1677 579 aa, chain - ## HITS:1 COG:BH0640 KEGG:ns NR:ns ## COG: BH0640 COG1001 # Protein_GI_number: 15613203 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Bacillus halodurans # 2 566 16 569 585 281 33.0 3e-75 MEKVDLLVKNAEVYNSYLKKFETADVYVLGGRIYYVCRETADVREDMLEPEQVIDGTGYR MLPGFVDIHMHIESSMMTPVSFGRRAAGCGVTTLVSEPHEIANVAGVQGIHEMINGAKDA PIDIYYGIPSSVPSTNSRLETTGGVIGFEEMKHLMGEDGVVCVGEVMNYRQIIRGDELEI TKFLDHLKEEDPQAVIEGHCPTLTGLDLAKFLYRGIDGDHTEHTLEELKDRFAGGMFVEL QEKMLRQEVLDHIITNRLYEHCCFVTDDTMADELMEHGQLNYVVQKAVALGFPLEEAVYC ASYTPARRMNLRDRGAIAPGKKADFQLIRTEECSGFQPEYVFKDGKEIFCRGEVSDQAGG HMFPESFYDSLHLPDITCDKFVPAKGLKGERAAVRVIQVQDGCTQTSEIHREMKVKDGCL QWEESGCMLAAVFERHGKNGNIGYGFVTGDCIRKGAAATTYFHDHHNLLVIGSNVEDMLA AAHRIIELKGGICTAENGKITAELALPVAGILSEEPADEIGRMLSGVRKSLITLGYRHYN PIMSLCTLGLPVSPALKLTDCGLVDVVRAETVPLILTTV >gi|224461045|gb|GG657759.1| GENE 291 298499 - 299803 1572 434 aa, chain - ## HITS:1 COG:FN1877 KEGG:ns NR:ns ## COG: FN1877 COG2252 # Protein_GI_number: 19705182 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 5 419 13 427 442 391 51.0 1e-108 MRQWLEKQFKLTEFHTNVKTELLAGITTFVTMAYVLATVPNMMESAGLDKHVMFTVLILL VILTTCAMALYTNRPFALAPGLGSVGIVTAMMANDGIAPAVTAGVIFWSGVLFIAISFLG LREAVVRVIPVSLKHAVSAGIGLFIALLGAKSCGLIIANEAKKSLGFGDLTSPEVIVAVI GFIILLILKSRKVQGDMILAIAAATVIGIPFGVTKMPESLFTMPAGIGGQFMNVDFMGAL NFAYIPFLIALFVPDFFSTFGTVLGVGAKAGYLDEEGNLPGIDKCFKVDAVATSFGALFG MPSMTTYLESSAGVEAGGKTGLTVIFTSVLFGLALLLAPAALMIPSAATAPVLIYIGINM LGAMRNIKYDDHTEAFPAFVCIAFTIFGNNIANGICAALPSYLIMKTASGKIKEVRPAMW VLVAVCLLYFYSIL >gi|224461045|gb|GG657759.1| GENE 292 299893 - 300870 901 325 aa, chain + ## HITS:1 COG:CAC1046 KEGG:ns NR:ns ## COG: CAC1046 COG0583 # Protein_GI_number: 15894333 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 17 313 1 296 303 222 38.0 8e-58 MTMDTIPNENTAGDFVMNIHELNYVICIAKHQNITKAAQELFISQPTLSKHLKKMERELG LKLFSRVDNCYIPTYAGRRYMEYAAQVLALTQDWEKELSDLLSLKDGELTVAFPLMRSSC MLPFILPSFHRKHPHVKVNFLEETHSIQERLLEDSQIDFAVFSEETIHPRLDYEELGREE ILLVVPRTHPLAKELPYYPEAGGAYPAVDWEKLKDETFILNSPEQNTGAVTAKLLKEHYV SPAFSFYTRNTQAALLLVQNGEGLCFAPESYVRSTAFEAPPVCFSLKDERAFTTTVAAYR KGAYLPGYARDFIENARAYFEKYTM >gi|224461045|gb|GG657759.1| GENE 293 300887 - 302434 1408 515 aa, chain - ## HITS:1 COG:PA3024 KEGG:ns NR:ns ## COG: PA3024 COG1070 # Protein_GI_number: 15598220 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Pseudomonas aeruginosa # 1 513 1 514 519 406 40.0 1e-113 MKQEHIVLTFDVGTQSSRAMLINSRGDILAKAQETHEPPYDSPEPGFAEQRADFYYEHIC RASLELKKSCARLWGQIEAVTVTTIRDTTICVDENGSPLRPAIVWLDKRRAEGRPAMSQM TRLMLKAVGMEETANLQFCKSHCNWIMQNEPDIWKRTYKYLLLSGYLTFKLTGNMADAAA SLVGHLPVDAQNRSWQRKGALTRPVFDIPEGKLCDIKESGRQLGTITEQAARDTGLGTGL PVLATGSDKACEILGLGCVTKEKAAVGFGTTATVTYTMDRYVEPERFIPPYISIIPGCFT PEIEIYRGYWLISWFKKEFAQKEVKQAAELKIPAEELLNERLKEIPAGCDGLLFQPYFTP NVTMPAARGAIIGFSDQHTRIHIYRAIVEGINFALMDGMRLMERRTGHTFKEIRLGGGGS RSDEICRITADMFGIPVIRTQTYEVTGVGSAMTAYVGMGVFKDYEEAVHSMVHVKDVFEP DMKQHEIYEELYENVFRNIYGRLSPLYTKLNEIYR >gi|224461045|gb|GG657759.1| GENE 294 302456 - 304195 1910 579 aa, chain - ## HITS:1 COG:MT2311 KEGG:ns NR:ns ## COG: MT2311 COG0277 # Protein_GI_number: 15841744 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 28 559 6 525 529 294 33.0 4e-79 MSKPYKGFEPKWVKEAAPKDSYRSIFRWGDPDFVKYPKESLYKMMKEKFNMTDDDFRAYD GDIGMDRVKLDAPCNLSQDHLEALRTIVGEAYVTTDDYPRLAVAYGKTGYDALRLRGRRV DCLPDAVVYPGTTKEVEDIVAYCCEHKIPVYVYGGGSSVTRGVEPVKGGISLDMRKRFQK VISFNETDQTITVQSGMSGPKLEKALNHAPELFGAKRRYTCGHFPQSFEYSSVGGWVVTR GAGQNSTYYGCITDIVMGQKYATPAGTIQTSCYPREATGPNLNQIMMGSEGAFGVLTEVT LKVFRYMPENRERFSYIFKNWKTARAAAREMMQCEAGFSSVFRLSDPEETNLMLRLYNVD DTPLWKLLNVRGFEDMKRCLFLGFTDGEKGFSRNVADNIRRIARKYGGMSLTSYVTKSWE KGRFNDPYLRDTLLDFGIMTDTLECTVNWSNMAKVHREVRKVCHALPNTIVTTHMSHCYP QGANLYFIFITRMDDADKFKAYHSTILDAIQKSGAAMSHHHGIGKMFAPWLEGQLGRTEY GVFKALKEYFDPDNLMNPGGTLGLDLPEEEKRFLRDDIR >gi|224461045|gb|GG657759.1| GENE 295 304209 - 304571 401 120 aa, chain - ## HITS:1 COG:CAC1324 KEGG:ns NR:ns ## COG: CAC1324 COG3862 # Protein_GI_number: 15894604 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Clostridium acetobutylicum # 3 115 4 114 117 90 45.0 5e-19 MKELTCIVCPNGCVLHVEGEPGSFKVTGNQCKRGADFAAAEMTHPVRSVCSTAATVFPDV PVIPVRVSKEIPKERIFDVMEEINKIVVSERVKRGTVLIKDVLGLGADVIATSSILSEQE >gi|224461045|gb|GG657759.1| GENE 296 304568 - 305836 1166 422 aa, chain - ## HITS:1 COG:FN0182 KEGG:ns NR:ns ## COG: FN0182 COG0446 # Protein_GI_number: 19703527 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 1 418 1 419 421 339 47.0 8e-93 MKSAYDVTVIGGGPAGLAAALKADEEGADVLLIEREARLGGILKQCIHDGFGLLRFGERL TGPEYVERFMEVFKCRQIACELQTFVTSIDKEAGRFLITAVNAHGVSEYTTKSLVLATGC RERTARQAAIHGTRPSGIFTAGTAQHLVNLSGLMPAKKCVILGSGDIGLIMARRLTLEGA KVAGVYEVKPEPSGLTRNIAQCLEDYDIPLYLSRTVTRVFGDDRVQAVEVMQVDGGMRPV HGTEELIECDTLILSVGLIPENEIAESLGVPICPGTRGPVCDSHFMTGVPGIFSCGNALH VNDLVDHVSESGELAGAAAAHYRQGAAGGTFVELIPDRTIQYIVPQKLDIQTEGAAVLYF RSRETVKDGTFVIEADGKEIFTKHYRNLRPPEMERLAADLSKLGIGRESKVTVHIRQEGA VR >gi|224461045|gb|GG657759.1| GENE 297 305820 - 307568 1508 582 aa, chain - ## HITS:1 COG:CAC1322 KEGG:ns NR:ns ## COG: CAC1322 COG0579 # Protein_GI_number: 15894602 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Clostridium acetobutylicum # 89 571 3 475 475 290 37.0 6e-78 MGRKELEKKLNKKLHKHYGTAVRAGIEEDIIRVTGTLSNWQDIVDACSMCVQKGTKMHVV NDIVLEGVTMPRMRTPVQSDGALEGRRPDVLIIGGGISGASIARELTKWKLDILLVEKEA DLAVQASGRNDGEVHPGVDLGRGTRKQYYVLRGNKMYGKICRELDVPFERCGQYVGFTHW WMYPAVLAYVWHRKHICKVTDTVLLSRKELRRKEKELNPDICFAIYNPSAGCVCPYGLTI AYGENAVENGAEISLDTAVLGMETEDGMIKSVRTNRGRIYPSIVVNAAGTFAEDIAAMAG DRFYSIHPRKGTNSILDKKAGHIVRGIASVKTLRQETAHTKGGGILHTVHGNLLVGPNAQ ETYEKENFATIQESIDAVFAKQKMTAEGLDKKDIITYFTGVRPATFEEDFIIEKGRRAKN LIHCAGIQSPGLTTAPAVALDVEEMAVTELRSKRTILRNENFNPVRRGVPVLKNMPKEER DKMIQENPDYGIIVCRCEEISKGEIVDALKAPIVVPTLDGIKKRLRPGMGRCQGGFCMPL VVDIISEYMHIPPGEVKKAGAGSVITYGRTKGKGGGSDEECI >gi|224461045|gb|GG657759.1| GENE 298 307743 - 308306 644 187 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3395 NR:ns ## KEGG: Cphy_3395 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: C.phytofermentans # Pathway: not_defined # 1 184 1 184 193 249 65.0 3e-65 MAAPRKENVKDLIIEATEELLRTKKLSDISLSEIARFAGISKGTLYYHYKTKTDILFDIT DKYLDRQYNDLIEWTGDASKDTSMHRLVKYILERDISTAGMRLHLFYDAMLGNEAIRKKL LNRYSEFASVISEKIRERTDRVPADYCAWLLLLLSDGLFIHQTLGNEELDPAKFIRQSEQ FIQEEFL >gi|224461045|gb|GG657759.1| GENE 299 308303 - 309286 741 327 aa, chain + ## HITS:1 COG:no KEGG:Psta_0599 NR:ns ## KEGG: Psta_0599 # Name: not_defined # Def: amidohydrolase # Organism: P.staleyi # Pathway: not_defined # 2 326 139 459 539 74 24.0 5e-12 MIDAHIHYAASVGQDRLNTLIHEAHLEALALQCIPKGGTLPVEEDAFAFQAQCSVPVYIF GGLDRSVYDTDPARSETSLLSEKLDSEVTRLMNMGCTGIKMLEGKPDVRKNFCVPDFDSP VWEAYWARLETEQIPVYMHVNDPEEFWDAEHVADYVKRAGWFYDETFIGNEEQYRQILCV LHRHPRLRILFPHFFFLSKQLERLACILDAFPEVRIDVTPGIELYYNLSAQGAKAREFFL TYKERILYGTDIGARALIRSENVPLDLDECRSRIKLIRDYLETDGGYLLESDGHYVAERQ PAVMHGLGLPQPVLDNIYSRNFLNFIK >gi|224461045|gb|GG657759.1| GENE 300 309287 - 309835 751 182 aa, chain - ## HITS:1 COG:CAC1549 KEGG:ns NR:ns ## COG: CAC1549 COG0386 # Protein_GI_number: 15894827 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Clostridium acetobutylicum # 1 180 1 180 181 196 52.0 2e-50 MNMNEIELKRIDGTVEYMEQYMGKILLVVNTASKCGFTPQYEELEALYRKYHEKGFEILA FPCNQFKEQEPGDDKTVEAFCRRNYGVSFPVFSKTEVKGEHAHPLYRILTEKQEFRGFDR EHPLSGKLHEILSADDPDYKNDNDVKWNFTKFLINRDGTVVDRFEPTAGMDKVEQAVEQL CR >gi|224461045|gb|GG657759.1| GENE 301 309895 - 310329 403 144 aa, chain - ## HITS:1 COG:CAC1991 KEGG:ns NR:ns ## COG: CAC1991 COG2258 # Protein_GI_number: 15895261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 142 2 143 145 137 47.0 6e-33 MGKVIAVCTSPEKGTQKKNVGRAEFIEDYGIKGDAHAGKWHRQVSLLSYGKIEEFCSRGA VVGNGAFGENLVVDGIELSELPVGTRFACNDVILELTQIGKECHHGCEIFQKMGDCIMPR EGVFSKVIRGGFIEAGDVLEIIKE >gi|224461045|gb|GG657759.1| GENE 302 310331 - 311227 1088 298 aa, chain - ## HITS:1 COG:lin1039 KEGG:ns NR:ns ## COG: lin1039 COG2896 # Protein_GI_number: 16800108 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Listeria innocua # 1 298 31 333 333 200 37.0 3e-51 MPEEGVAAIPHSEILTYDEIKRLTGIFASLGITKVKLTGGEPLVRKGIPELIAMLKSIPD IEQVTLTTNGTLLKEHMPALADAGLDAVNISIDALDERLYEQITRRNGLRAALGGLAAAL SCPQLKVKVNCVPLAGVNDREWVPLAGIARDKEADVRFIEMMPIGLGRKHAGRTQEEILE ALRKAYGEEKTVQGYHGNGPGVYVRFEGFKGRIGFISALSHKFCGGCNRVRLTSAGYLKP CLQYAGGMDVKALLRGQVPDSVLREQVRRAVYGKPAGHSFDSPVTDGMEEMEMSRIGG >gi|224461045|gb|GG657759.1| GENE 303 311311 - 311835 488 174 aa, chain - ## HITS:1 COG:CAC2022 KEGG:ns NR:ns ## COG: CAC2022 COG0521 # Protein_GI_number: 15895292 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Clostridium acetobutylicum # 7 159 3 155 165 153 50.0 1e-37 MEGYRWKTAVVTLSDKGYRREREDKSAPLIQELLSAEDYDVAAKILLPDEQVMIERELIR LCDEEHMDLILTTGGTGFAERDCTPEATLCVADRNAPGIADAMRYFSLQITPRAMLGRGV SVIRGKTLIVNLPGSPKAVRENLSFILPSLGHGLGILTGRESECAALAQRHGKA >gi|224461045|gb|GG657759.1| GENE 304 311910 - 312242 369 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568149|ref|ZP_03777174.1| ## NR: gi|225568149|ref|ZP_03777174.1| hypothetical protein CLOHYLEM_04222 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04222 [Clostridium hylemonae DSM 15053] # 1 110 1 110 110 204 100.0 2e-51 MKESEFKICTWIHHTATFIGLSAGIWALDKTTGKKRQNVLKETALVLYILSQVWAAVKIA VSLLSGRERMKDSYDNIQSLCEDKRKERGLTWTLTAVSACVKIGTPLMLR >gi|224461045|gb|GG657759.1| GENE 305 312400 - 313431 1190 343 aa, chain + ## HITS:1 COG:SP1700 KEGG:ns NR:ns ## COG: SP1700 COG0722 # Protein_GI_number: 15901534 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Streptococcus pneumoniae TIGR4 # 15 339 15 337 343 377 52.0 1e-104 MGMTVNKELPLPADLKSEEPLTADIIALKQKRDREIRDIFTGASDKFAVIVGPCSADNED SVCEYVSRLAKLNDSVSDRLVLIPRIYTNKPRTTGAGYKGMLHQPEPDKAPDLLAGIIAI RRMHIRAIKESGLTAADEMLYPENRSYLDDILSYEAIGARSVENQQHRLTASGMDIPAGM KNPTSGDFSVMLNSVTAAQSSHNFIYRGQDVTTDGNPLAHVILRGGVDKYGTCIPNYHYE DLMRLLAQYQKRELNNPAAVIDTNHSNSDKQFKEQLRIVSEVLHSRAYNSELKKLIKGVM IESYIEEGCQPIGSNRVYGKSITDPCLGWEDTRRLILKIAEEA >gi|224461045|gb|GG657759.1| GENE 306 313428 - 314348 752 306 aa, chain - ## HITS:1 COG:no KEGG:Tter_1839 NR:ns ## KEGG: Tter_1839 # Name: not_defined # Def: integrase family protein # Organism: T.terrenum # Pathway: not_defined # 21 285 19 295 310 71 27.0 4e-11 MLETEYASVKLRDDIWPDYVKHFKSGTTAASYRADVQEFMELCGKDFLDTGEQDAERYFQ YLKKKMKENSLGAQTVSKKIRELHSFAGFIEKHRTAYGIKEGFHDSFSPLLGALKRQERF AGSIPVEHVDALFKAAEGNLTAYTIFTLLYRVSLSSTEITALRPEDLTAYDDGVYAAAGD RKEPCFVPGDAVEVLERYMEKRMPGEYLFSNSRGRKLNVMYISRLMKKYTLMAGIPCYSA QALKNSCAFTLFAYGAGPQETAKQLGITVTQIRRYSGRSYRENMMRKANELVKLKVEPPG GSSSAS >gi|224461045|gb|GG657759.1| GENE 307 314453 - 315364 917 303 aa, chain - ## HITS:1 COG:CAC0293 KEGG:ns NR:ns ## COG: CAC0293 COG1619 # Protein_GI_number: 15893585 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Clostridium acetobutylicum # 9 298 4 297 306 160 31.0 3e-39 MKNRVIYPRPLRKGDQVCVIDPANAFTQEGVRNARAFLEGEGFHVVISEDMAFKRGTARE RAERLNGVLRDGRNRAVLCMWGGYGTIPLLDKIDYEAVRKNRPVFSGFSDITAIHTAIQK ETGLVTFHGPALYSPKRPVEPKAHQLFIEMVTRPKKRRELSNLNGEPFRAIKEGAAHGRL TGGNMTMISRLMGTPFEIDTAGKIIFLEEVGEKPYRLHGMLYQLKLGGKFKDAAGIIVGG LTECDDTGRPGSGEEAVRSVLKEVEIPVVCNVRAGHLCDPLTLPLGAEVKMEENRVIIAG DVT >gi|224461045|gb|GG657759.1| GENE 308 315647 - 316375 666 242 aa, chain - ## HITS:1 COG:no KEGG:Closa_2690 NR:ns ## KEGG: Closa_2690 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: C.saccharolyticum # Pathway: not_defined # 1 242 8 249 249 409 78.0 1e-113 MTAENVDKEHLCCIIRSRKPHQGIEAKRRWLRERLKEGHVFRKLNEKAVVFIEYAPLETA WVPINGDDYYYLYCLWVSGGYKGKGYGKALMEYCIADAKEKGKSGICMLGAEKQKAWLSD QSFAKKSGFKTVDIAGNGYELLALSFDGKEPRFAPNAKNGRIESKELTIYYDMQCPYVSQ NIEKIRRYCETNGILASLIQVDTLQKAKELPCVFNNWAVFYKGVFETVNLLDIAGLERIL RK >gi|224461045|gb|GG657759.1| GENE 309 316434 - 317309 1150 291 aa, chain - ## HITS:1 COG:VC0480 KEGG:ns NR:ns ## COG: VC0480 COG0668 # Protein_GI_number: 15640507 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Vibrio cholerae # 14 288 13 285 287 201 37.0 1e-51 MGTNEVTEVTQEAVENANEFVRYFQDHIPSLIGFGIKVVIALIAFLVGRILIKWVRKLVR TSLERSEADKGVEQFVDSVLKAGLYILLIFTIAAKLGVDTTSVAALVASGGVAIGLALQG SLSNFAGGVLILLLKPFTVGDYIIEDSNGNEGTVKEIQIFYTKLSTIDNKTIVIPNGMLT NNSLTNATAKDERRLDLKVDISYHADLRKAKDIIENLLKKDDCILKDEEIVVFVDELAAS AVIIGARAWVKSEDFWPTKWRLLEEIKLTLDARGIEIPYQQVTVHMSQQEK >gi|224461045|gb|GG657759.1| GENE 310 317330 - 318163 537 277 aa, chain - ## HITS:1 COG:BS_ylmD KEGG:ns NR:ns ## COG: BS_ylmD COG1496 # Protein_GI_number: 16078601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 39 277 33 276 278 159 35.0 7e-39 MKLDIKYKNEAHIFDIREKEGVPYLVYPLLEDTGVVKHGFSTRLGGVSTGNCATMNISTT RGDSPEAVEENRRRIASAIGVKPEDMTYTHQTHTTNVAVVKEEDRGARFMETDGMVTNVP GICLVTFYADCVPLFFVDPVHRAIGLSHSGWRGTVGRIGKVTVEKMTENYGTDPKDVIAA VGPSICQDCYEVSEDVICRFRENFPEECWPDLFYNKGDGKYQLNLWKANEYVFAEAGIRR EHTAVTNVCTHCNPDILFSHRTTGEKRGNLSAFLALK >gi|224461045|gb|GG657759.1| GENE 311 318173 - 318523 301 116 aa, chain - ## HITS:1 COG:VC0580 KEGG:ns NR:ns ## COG: VC0580 COG0792 # Protein_GI_number: 15640602 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Vibrio cholerae # 4 113 5 118 122 89 42.0 2e-18 MTYNKRAEGSRYEQTAGEYLEEQGYEIICFNYRCRTGEIDIIAKDGEYLVFCEVKYRRDA SKGYPSEAVDARKRQVLVKCAMYYVTVNKLADAPCRFDVIAILGGEISHIKNAFEC >gi|224461045|gb|GG657759.1| GENE 312 318555 - 319214 756 219 aa, chain - ## HITS:1 COG:SPy1162 KEGG:ns NR:ns ## COG: SPy1162 COG0164 # Protein_GI_number: 15675138 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pyogenes M1 GAS # 36 214 70 250 263 193 58.0 2e-49 MNKREEEKLRRQEEKLRKEIERTERLSVYEKEYGMYRYICGIDEVGRGPLAGPVVAGAVI LPKDDPVLYLNDSKKLSEKKREMLYDEIMEKAVATGIGIVGPQRIDEINILQATYEAMRM AIADLPVQPDILLNDAVTIPGVEILQVPIIKGDAKSVSIAAASIIAKVTRDRLMVEYDKI LPGYDLASNKGYGTKAHIAGLKEHGPSPIHRATFIKNFV >gi|224461045|gb|GG657759.1| GENE 313 319207 - 319764 792 185 aa, chain - ## HITS:1 COG:alr2975 KEGG:ns NR:ns ## COG: alr2975 COG0681 # Protein_GI_number: 17230467 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Nostoc sp. PCC 7120 # 19 182 20 190 190 134 42.0 1e-31 MSRRRKNDVGGSVLRELGGWLLYILIIVGLTYLIITFVGQRTRVSGYSMEPTLSDGDSLI VDKISYRFRDPKRFDIIVFPYKYEKNTYYIKRIIGLPGETVQVTDGYVYINGQKLESDTY GAELMQAEASPVTLSEDEYFVMGDNRNHSSDSRDPSVGVIKRKDLMGRAFLRVYPFDKIG VIKHE >gi|224461045|gb|GG657759.1| GENE 314 319805 - 320653 826 282 aa, chain - ## HITS:1 COG:CAC1761 KEGG:ns NR:ns ## COG: CAC1761 COG1161 # Protein_GI_number: 15895038 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 5 279 8 283 283 276 48.0 2e-74 MHFQWYPGHMTKAKRMMQENIKLIDLVIELVDARIPQSSRNPDIDELGKNKARLILLNKA DLAEEKWNDAWAEYFRKKGFSVVKVNSKKGGGMKSIHGVIQEACKEKIERDRKRGILNRP VRAMVVGIPNVGKSTFINSLAGKSCTKTGNKPGVTKGKQWIRLNRQVELLDTPGILWPKF EDQQVGLKLAFVGSIKDEVLQTEELAAELIRFMLDHYPGVLGKKYAVEEDNDVYVTLSRI AESRHCLVRGNELDTEKAALLLTDDFRNGKLGRLTLEYPQEV >gi|224461045|gb|GG657759.1| GENE 315 320664 - 321152 592 162 aa, chain - ## HITS:1 COG:BS_sipS KEGG:ns NR:ns ## COG: BS_sipS COG0681 # Protein_GI_number: 16079388 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 22 158 41 180 184 87 39.0 1e-17 MVVCLLAFVYVWYFGQRVSTIGDSMNPVLENGDVVLVNRIVYNATSPKRGDIIAFKPKGN ENAHYYIKRIVGLPGETVEIIENSVYINGKKIEEDYKTTDIDDVGIASEKITLGGDEYFV LGDNRENSEDSRNADVGNVKRKYIYGEVWFTISPRKNMGFTG >gi|224461045|gb|GG657759.1| GENE 316 321251 - 321322 68 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCIVLFLLLGTGGVYKASAFCTV >gi|224461045|gb|GG657759.1| GENE 317 321383 - 321436 83 17 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240146493|ref|ZP_04745094.1| LSU ribosomal protein L19P [Roseburia intestinalis L1-82] # 1 17 101 117 117 36 100 1e-26 YLRDRVGKKAKVKELVK >gi|224461045|gb|GG657759.1| GENE 318 321543 - 321752 269 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238916980|ref|YP_002930497.1| large subunit ribosomal protein L19 [Eubacterium eligens ATCC 27750] # 1 70 1 70 115 108 78 9e-25 MNDIIRNIEAGQLKENAPVFNVGDTVKVYGKIKEGNRERIQVFEGTVLKKQGGGARATFT VRKNSNGIGV >gi|224461045|gb|GG657759.1| GENE 319 321876 - 322655 951 259 aa, chain - ## HITS:1 COG:MA0415 KEGG:ns NR:ns ## COG: MA0415 COG1028 # Protein_GI_number: 20089308 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Methanosarcina acetivorans str.C2A # 4 254 9 252 256 137 35.0 2e-32 MGIFDGKTAIITGGGKARSIGYGIAVAYAKEGANLALTGRNEQKLLDAKEELERLYGIKV LPLQADVTPDEKSEEVVKETVQKVVDTFGRIDVLINNAQASASGIPLSMHMKDHFDLGIY SGLYAVFYYMRACYPYLKETQGSVINFASGAGLFGNAGQSSYAAAKEGIRGISRVAATEW GKDNINVNVVCPLAMTAQLENFKEAYPEAYEKNLKAVPMGRFGDPEKDIGRVCVHLGSPD LKYMSGETLTLEGGMGQRP >gi|224461045|gb|GG657759.1| GENE 320 322684 - 323436 849 250 aa, chain - ## HITS:1 COG:BH2479 KEGG:ns NR:ns ## COG: BH2479 COG0336 # Protein_GI_number: 15615042 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Bacillus halodurans # 1 246 1 246 246 274 54.0 1e-73 MQFYIMTLFPDMVMNGLSTSITGRAMEKELLQIEAVNIRDYAFNKHNSVDDYPYGGGAGM LMQAEPVFQAYSAIKEKAGRTPRVVYMSPQGRTFDQEMAEEFAKEEELVLLCGHYEGIDE RVLEEIVTDYVSIGDYVLTGGELPAMVVVDTVSRLVPGVLHNDVSAEFDSFQDSLLEYPQ YSRPEIWHGKQVPPVLLSGHHANVEKWRREQSVIRTARNRPDLLEKAELDEKEKELARAI LGSEYKDHIL >gi|224461045|gb|GG657759.1| GENE 321 323436 - 323942 576 168 aa, chain - ## HITS:1 COG:CAC1757 KEGG:ns NR:ns ## COG: CAC1757 COG0806 # Protein_GI_number: 15895034 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Clostridium acetobutylicum # 1 165 1 161 166 106 36.0 2e-23 MEKMLKVGVITSTHGIRGEVKVFPTTDDPGRFKVLKQVILDTGKDTLQLEIENVKFFKQF VILKFKGIDNINDVERYKRCALLVERQDAVPLEDGEYFVADMLGMKVQTEDGELFGTLAD VMETGANDVYVIASPAHGEVLVPAIRECIQNIDIEQGMMTIHLMEGLI >gi|224461045|gb|GG657759.1| GENE 322 324035 - 324265 335 76 aa, chain - ## HITS:1 COG:BH2482 KEGG:ns NR:ns ## COG: BH2482 COG1837 # Protein_GI_number: 15615045 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Bacillus halodurans # 1 76 1 76 76 67 59.0 5e-12 MKELVEVIAKALVDDPDSVVVTEREDKKTTVLEVHVADSDMGKVIGKQGRIAKAIRSVVK AAAAKEDKKVIVDIMD >gi|224461045|gb|GG657759.1| GENE 323 324289 - 324534 352 81 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|160880540|ref|YP_001559508.1| ribosomal protein S16 [Clostridium phytofermentans ISDg] # 1 81 1 81 81 140 80 4e-31 MAVKIRLKRMGQKKAPFYRIVVADARSPRDGKFIEEIGTYDPNQDPSVFKVDEEAAKKWL GTGAQPTEAVNKIFKAAGIEK >gi|224461045|gb|GG657759.1| GENE 324 324575 - 325921 1506 448 aa, chain - ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 435 1 430 451 441 56.0 1e-123 MAFDSLTEKLQNIFKNLRSKGRLTEDDVKEALKEIKRALLAADVNFKVVKGFIKNVQERA VGQDVMNGLNPGQMVIKIVNEELVKLMGSETTEIKLQPGSAVTVIMMAGLQGAGKTTTTA KLAGKYKLKGKKPLLAACDVYRPAAIKQLQVNGEKQGVDVFSMGDSHKPSDIAKAALLHA QKNGNNIVILDTAGRLHIDEDMMAELQEIKEAVDVHQTILVIDAMTGQDAVNVASDFNEK IGIDGVIITKLDGDTRGGAALSVKAVTGKPILYAGMGEKLSDLEQFYPDRMASRILGMGD VLTLIEKAEAEIDEAKAIEMSRKLKKAQFDFEDYLESTKQMKNMGGLGNIMNMMPGLGGM GKMKGLDDEQAAQAEKNMARMEAMIYSMTLEERRNPDLLNPSRKHRIAKGAGVDISDVNR MVKQFGEMKKMMKMMGKGGKKGKFRLPF >gi|224461045|gb|GG657759.1| GENE 325 325923 - 326267 506 114 aa, chain - ## HITS:1 COG:BS_ylxM KEGG:ns NR:ns ## COG: BS_ylxM COG2739 # Protein_GI_number: 16078660 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 10 95 12 97 110 60 47.0 1e-09 MNEILEQALLYDFYGELLTEHQKEIYEQFVLEDLSLGEIAVEAGISRQGVHDLVKRCGRT LKGYEDKLHLVEKFVSIKEKVKQIDELLDGYKEREPQELVADIRKISDEIIEEL >gi|224461045|gb|GG657759.1| GENE 326 326337 - 327734 769 465 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568169|ref|ZP_03777194.1| ## NR: gi|225568169|ref|ZP_03777194.1| hypothetical protein CLOHYLEM_04243 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04243 [Clostridium hylemonae DSM 15053] # 1 465 49 513 513 905 100.0 0 MYEYIEKKREERKPHINSHYSAVIQWMKIGGAEYRSENVLFAAASKWLKSKGMSKIDSQL RKIVAEIFNDGEDLESETVFHNIIARRLKREDLVEEEEKESARMSEDTEAAEESGVPEEA DKEEPLMWGRLQICGTIYPANMVFKRYSGPVLTLYRSISADEYAGLCRTVVSRRKPVFTF KPGRKGGEKYFAPNIRYLTEGSEPGHKSMQEKGEREITVKVLLLPSVTGALIYNPKYSGF ALDSEERFMREAGMRPVRKGSGHQIVIKRESPPGSKARSASSLNVGFKTAGALRLLADYI VSIHVIEPEMIKQGEVAAELPLSPVLEEDEMAYWEELPMAQVEGDIFAMEGRSYDVGSNQ VENGECLWSLLLEAGIPGYILEAAAQEQNIRFMDYVDTVRLAPLVDAVNRRLPEADRIRI FLDAFYYDGHYDTKESGLYGSEGTILYIGGIFAPDGLGHYVMRER >gi|224461045|gb|GG657759.1| GENE 327 327827 - 328738 1099 303 aa, chain - ## HITS:1 COG:BH1930 KEGG:ns NR:ns ## COG: BH1930 COG1404 # Protein_GI_number: 15614493 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 21 281 144 418 444 196 42.0 6e-50 MKHVKDVIDYRCEDTVSGKYTGKHVGIAVLDTGIVPHPDLRDRIRGFKDCVGGRGRMYDD NGHGTHVTGILGGNGRMSRGLHAGMAPEADLVSVKVLDARGEGTVDGILRGIQWLLENWR AYDIRVVNMSVGANLGLEDEKGKELEQAAEQLWDAGLVVVASAGNYGPGEGTVSVPGTSK KIITVGSSDITVSHGVKKVSYYSGCGPTHECVVKPDVVAPGDQIISCNSRFGIKRQKPYT VKSGSSMATPVVSGAAALLLSKYSDMSNVEVKLRLRESCKRMEESQGWGRISIPEFLGSR RLS >gi|224461045|gb|GG657759.1| GENE 328 328854 - 329492 563 212 aa, chain + ## HITS:1 COG:lin1509 KEGG:ns NR:ns ## COG: lin1509 COG0484 # Protein_GI_number: 16800577 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Listeria innocua # 1 69 1 67 376 75 52.0 1e-13 MENRNYYDILGVSTKAAPDEITAAKNALAKQYHPDANIKNGIDTTDKMQEILEAYNILSD TVKRAEYDREISGRRQDMQTFDLKSGAYGQEQSEEETFVTYWKAAGALYEIIMESNELFR QKEETSRLAQLSMQALKHILILKDASIPEKYWHPDIMNWLLFTWYKNRNMTVAYLLTMYD EYVKKSASPVEKLKLQGRSHRFQHSVKRLIKF >gi|224461045|gb|GG657759.1| GENE 329 329567 - 329836 235 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDLSATNCGCGCESRCGGDCGCGFGGNSCIWIILLLCCCGGFGGNNNGCGGGCGNDSCI WIILLLCCCGGFGGNGGGCGCGNDCGCGC >gi|224461045|gb|GG657759.1| GENE 330 329893 - 330744 1242 283 aa, chain - ## HITS:1 COG:CAC0986 KEGG:ns NR:ns ## COG: CAC0986 COG1464 # Protein_GI_number: 15894273 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Clostridium acetobutylicum # 7 281 3 270 272 222 48.0 8e-58 MKGIKTKKIVSVVLAGVLTAGVLSGCGKSGGSKAEAKDTEDKVIKVAASATPHAEILKEA EGLLKDKGYDLEVTVFDDYVQPNEVVESGEFDANYFQHAPYLESFNEEKGTHLAGAGEIH YEPFGIYPGTKKNLKDIKDGDSIAVPNDTTNEARALLLLQDNGIITLKEGAGLNATVNDI TENPYDVKIVELEAAQIARVVDETAYVVLNGNYALEAGYSVAKDALAYETSDSEAARTYV NIIAVKEGSEDKAGIKALVDVLKSDDIKKYIEEKYDGAVIPYE >gi|224461045|gb|GG657759.1| GENE 331 330762 - 331421 958 219 aa, chain - ## HITS:1 COG:FN0659 KEGG:ns NR:ns ## COG: FN0659 COG2011 # Protein_GI_number: 19703994 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Fusobacterium nucleatum # 2 218 14 230 233 166 45.0 3e-41 MWDSEIILMILKGLMETLYMTLLSAGAGYLFGLPAGVLMAVSRKEGIKPNRILYKILDVT ANIVRSIPFLILLILLIPLTRVVAGQSYGSSATVVPLVVAAVPFIARMVESSITEVDEGV IEAARAMGAGNMRIVTKVLLVESRTSLITGATIAIGTILGYSAMAGTIGGGGLGDIAIRY GYYRYQTDIMFATVVLLVILVQLFQTAGMSIASRLDKRK >gi|224461045|gb|GG657759.1| GENE 332 331408 - 332445 1070 345 aa, chain - ## HITS:1 COG:BH3481 KEGG:ns NR:ns ## COG: BH3481 COG1135 # Protein_GI_number: 15616043 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Bacillus halodurans # 4 339 2 335 338 299 48.0 4e-81 MSEIIIENLCKTYRSKDGTVEALKHVNLNVGDGDIYGIIGMSGAGKSTLVRCMNFLERPT EGRVLIKGQSLGSLPEKELRRQRESIGMIFQHFNLLMQKNVLDNVCFPLYIQGRKKKEAR QRAAELLELVGLGDRQKAYPSQLSGGQKQRVAIARALASDPEILLCDEATSALDPQTTSS ILELLRDINVRFGITIVVITHQMAVVREICTHVAVMKEGQVEEQGRVGDIFAHPGSAAAR ELILSDRGEDTQRRSRMLNEKIRSGRQIRVVFSENSAFEPVIANMILKFREPVNILRADT KNIGGVAKGEMILEFVPGSINIEGMKTYMSERGLETEEVTEDVGQ >gi|224461045|gb|GG657759.1| GENE 333 332584 - 333495 1084 303 aa, chain - ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 292 1 292 301 279 45.0 5e-75 MTLTQLKYVITAANASSMNEAAKQLFISQPSLSTAVRELEDEIGIDIFRRTNRGVSVTPE GEEFIGYARQVVEQYELVEAKYIAKEKTKKKFSVSMQHYTFAVHAFVEMVKQFGMDEYEF AVHETKTYEVIEDVKNFRSEIGVLYVNDFNRKVLTKLFHEFNLEFHEILKCSIYVFMWKG HPLAGRTEIALEELEEYPCLSFEQGNYNSFYFAEEVLSSYEYKRIIKVNDRATILNMMVG LNGYTLCSGIICEELYGSDYCTVKLSSNEKMSIGYLVRKGVNISPLGKKYLEEIAKFQDK ALG >gi|224461045|gb|GG657759.1| GENE 334 333583 - 333726 225 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568178|ref|ZP_03777203.1| ## NR: gi|225568178|ref|ZP_03777203.1| hypothetical protein CLOHYLEM_04252 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04252 [Clostridium hylemonae DSM 15053] # 1 36 52 87 98 67 100.0 4e-10 MNRKLIIDGNAIYEIDEDCMLKNRVDGKEDEKEEGTGKKKDKDGNGK >gi|224461045|gb|GG657759.1| GENE 335 333854 - 334363 430 169 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568177|ref|ZP_03777202.1| ## NR: gi|225568177|ref|ZP_03777202.1| hypothetical protein CLOHYLEM_04251 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04251 [Clostridium hylemonae DSM 15053] # 9 169 1 161 161 195 100.0 1e-48 MEHKPPRPMTPLDTMVTPPYLYTLKLMLPYTPSSNQRFLAIYIKFLEFRYTMDHFHGFPA RSSSKDSRHGFAPMGMFEDLKPYMAPEEKEMMDQMEMMMNMMEMVQSTQAAEGGGNGAGG FDPMDMMMGMMDPEQQEMFQTYSNMFESDMAQAYNNSNEKPKKEGEESL >gi|224461045|gb|GG657759.1| GENE 336 334360 - 334860 219 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|167758960|ref|ZP_02431087.1| ## NR: gi|167758960|ref|ZP_02431087.1| hypothetical protein CLOSCI_01306 [Clostridium scindens ATCC 35704] hypothetical protein CLOSCI_01306 [Clostridium scindens ATCC 35704] # 1 90 1 90 94 134 68.0 3e-30 MNEWMNNPAMKNLDPLKLELIKTAARQTEGKTGKSLAPVLMALITNANKKGIQFSPDEIT LILEMLKEGKSKQEKDQIDQMLKMVMGYIKNKKQCRERISSFPCTFLKPFFFSHHPDLSS FLGPLPFFSLFIIFQDKPWHRCRMILSVQRHHGKKRMIDRRAFSVQ >gi|224461045|gb|GG657759.1| GENE 337 334678 - 335154 526 158 aa, chain - ## HITS:1 COG:Ta0599 KEGG:ns NR:ns ## COG: Ta0599 COG1607 # Protein_GI_number: 16081697 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Thermoplasma acidophilum # 4 155 2 154 165 102 36.0 2e-22 MKAESRRVSESVVETVHMVRPNHLNAAGRLFGGMLMQWIDEVAGLVGKRHTRMNVITASV DNLRFLRGAYQRDVIIIIGKVTYVGKTSMEVKVDSYVESLDGERTPINHAFFTMVALDGE DHPTPVPRLILENDEEREEWERAKKRREIRMMRKEEGF >gi|224461045|gb|GG657759.1| GENE 338 335151 - 335642 461 163 aa, chain - ## HITS:1 COG:no KEGG:CPF_1774 NR:ns ## KEGG: CPF_1774 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 1 160 7 177 184 75 28.0 6e-13 MVRSMSKEEFMHLYCLCAETVKEAFEKYEAAIIRADGKEKMSAFFERVLSENKDAAYADF YYPVLPEEQKQIFCFGLDSRQLAVLGKMETDKGHIYYRLDGEIMKFLLEVTVREWLFSTF YFAHKKVTIWGNYKMEFPIFCEDKAILDHYTELAKECGLECHK >gi|224461045|gb|GG657759.1| GENE 339 335822 - 336559 730 245 aa, chain + ## HITS:1 COG:BH0167 KEGG:ns NR:ns ## COG: BH0167 COG0101 # Protein_GI_number: 15612730 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Bacillus halodurans # 1 237 1 235 263 139 33.0 4e-33 MRNIRLTIEYDGSRYQGWCRLGKEESNNTVSNKIIEVLRKMTGEYIIELNCGCRTEVGVH AYAQVANFKTDSDMDILEIKHYLNRYLPMDIAITNVEDVPDRFHAQLNATSKTYVYRMTI DDVPSVFDRKYTYHCFKIPDKKLMQQASLLFIGKHDFKNFSTVKKNKTTVKEIFEIEVYG DTEEMQILIHADDFLHNMARLVVGTLLEIGFGTRKKEDIEEIFAGTKTPSSPCDAKGLYL QEVSY >gi|224461045|gb|GG657759.1| GENE 340 336703 - 337143 538 146 aa, chain - ## HITS:1 COG:SP2165 KEGG:ns NR:ns ## COG: SP2165 COG4154 # Protein_GI_number: 15901975 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Streptococcus pneumoniae TIGR4 # 1 144 1 140 147 133 47.0 1e-31 MLKGIPKIISPELLKVLSEMGHGDRIVIADGNFPAESVGKNGIVIRCDGHTVPEILDAVL KLFPLDASSDKPVSLMKVPEGEDVKTPIWDIYKVIIGKHEERGDSVVENIEKQEFMKMAG EAYAVIATGEGALYANVMLKKGVVQG >gi|224461045|gb|GG657759.1| GENE 341 337137 - 337520 194 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 3 121 4 126 126 79 34 8e-13 MVKFDHFNFNVLDLEKSLAFYKEALDLVPVKEKRDPDGAFVLIYLGDGSSGFTLELTWLN DRKEPYNLGEGEFHLAFTVDDFGKMYEKHKAMGVICFENKEMGVYFIADPDGYWIEIVPE EERQNIC >gi|224461045|gb|GG657759.1| GENE 342 337533 - 338420 1157 295 aa, chain - ## HITS:1 COG:PM1278 KEGG:ns NR:ns ## COG: PM1278 COG1830 # Protein_GI_number: 15603143 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Pasteurella multocida # 1 289 1 288 290 325 53.0 9e-89 MADVDGLKVAKNYHVNEPFAKNGGFHVKGMQDVDWGMKKRLSKIFQPESGHTVMLAFDHG YFMGSTAGLERLDLVIPPLMPYVDVLMGTRGAMRTCIPAENNKGIALRVSCGSSIVDEDL SHEVIGVSIEDAVRMDASCMAVQTFIGADGEKDSLENLCKTVDAGLKYNIPTMGVVAVGK QMERTSRFFKLATRILPELGAHIVKTYYCEDFEEIVSACPVPIVVAGGKKLPENEALTLC YKAISEGASGMDMGRNIFQSTHPEVMAQAVNMIVHKGATDKEAYEFYLDVSSQSK >gi|224461045|gb|GG657759.1| GENE 343 338526 - 339638 1192 370 aa, chain - ## HITS:1 COG:STM4077 KEGG:ns NR:ns ## COG: STM4077 COG1879 # Protein_GI_number: 16767343 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 45 370 29 340 340 224 40.0 2e-58 MKKKLISALLCAAMIATMVVGCGKSGSDSDSKDSGDTKKSGDDLQIVFVPKVTGNSFFES ANDGAQEFAKKVGGFEIKYDGSATAAVADQVTIINNAINQGADGIAVSSVDATGLDEVMK KAMDAGLAVVTWDSDVSADARQIMVSQGSPEILGEFLLQLSENALKASGLDPAKDAVKYC WHYSQATVTDQNSWHDAAEKMISEKYPNWENVAPDNYYSEQDAEKAISVGESVLTAHEDI NLVICCDSTALPGQAQAAQNLGKTTKDVAITGFATPNAMKDFCTAGVVNNWGLWDTGLQG SIANYMAYYLASGNKVTIGDKVDIPEIGEVEIVNNSEITGDDADNVDGSGVVFLPERAEF NADNMDDYDF >gi|224461045|gb|GG657759.1| GENE 344 339709 - 340716 1235 335 aa, chain - ## HITS:1 COG:STM4076 KEGG:ns NR:ns ## COG: STM4076 COG1172 # Protein_GI_number: 16767342 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Salmonella typhimurium LT2 # 12 333 8 328 333 229 41.0 5e-60 MNKMKGLKSKVFSWEMFLIVILLLEILVFGQLNPRFLRLNVLMGSINDFISICIISLFVT FVMVTGGIDIQAGSIVGLTSITIGLLWQDKGFNVWAAVLVSILVGTLCGLLSGFFVAYTG VQPMVVTLGGSFLYSGLALAVVNMSSSEAYEGISGFPASFMKLSSGNIGGVPNQLIIFII LVIFAYILLHKTKYGRYIFLCGVNSSACRYSGIRVRPIIMSTYGLSGMSAALAGVVLTSY LGSAKSDLGSSLTLPIITAVVLGGTSNLGGKGGVIGTALAACVIGILKFGLNMSGMASQY LDIPVGILLIIVLAFRMTGSGNKKLLAKLKKNRGR >gi|224461045|gb|GG657759.1| GENE 345 340709 - 341722 1359 337 aa, chain - ## HITS:1 COG:YPO0411 KEGG:ns NR:ns ## COG: YPO0411 COG1172 # Protein_GI_number: 16120745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 11 329 9 325 351 197 38.0 2e-50 MEKIKKALKARELSSLLCLVAMFLLVGVVNPSFLKPQNILLCFNGSIVYVLIAIGMAFVI LTGEIDCSIGAQLGLAAAVCATYLREGASWGMAIALCILVGLVCGTINGIGVTVLKIPSI IMTLGTNGIYRGLIYLYTGGKWVENLPSGFKQLAQKNVAGNLSWFFVMDLAVMVLIFLFL VKTKRGKRFAAVGDNEAGANLIGIPVLATKMKAFMTCGLFAAFGAILYVSRVGFVTAISG NGYEMKAIAACVIGGISLTGGVGTVIGASIGGIIMASISRLLVFLKISSDYDNTITGILL IVIVVVDALVQRRSVEKARRERLSARVTAAEGGAINE >gi|224461045|gb|GG657759.1| GENE 346 341725 - 343236 185 503 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 277 477 31 221 312 75 29 8e-12 MQGVKNRSGGEALLKVKDIRKSFGSNEVLKGINMELREGEVIALIGGNGAGKSTLMKIIM GIYQQDEGEIYINGEKVDISKSSTALANGIYLVPQEPMLFPNMTVEENVAMGFDEKKSEI HKRMVEMIEHLGWDLKLERKANTLSIAEQQLVEILKGLLRNARILILDEPTSSLSFNEAE SLFKLVEELKQKNIGIFYITHRLTEVFQIATHVSIMRDGVVSLSGEVSEFEKSHLVKALL PPDSELKTAGERVEIDYTSAEPVLELKDFSGYGFSDLNLEVYAGEILGVAGVVGAGRTEF ATTIFGMDKVKSGKVLLDGEDITGLSTRRVLDKGVNYVPEDRFLNGIFKIREVGWNISSA QIRNMSRLFLNRKKEEELADQYISDFRIKVTGQDQIMGSLSGGNQQKGVIARALSTNPKV IILDEPTRGIDAGARGDVYSIIGKLKKQGVAILLISSDLEEIVELSDRAVSMYQGHINHT FTREKIDLDNLTAASFGVYEEGE >gi|224461045|gb|GG657759.1| GENE 347 343592 - 344533 900 313 aa, chain + ## HITS:1 COG:SMb21021 KEGG:ns NR:ns ## COG: SMb21021 COG2390 # Protein_GI_number: 16264342 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Sinorhizobium meliloti # 2 310 3 311 315 184 32.0 2e-46 MSDTSSDNNTQFEKNLLYKASWYYYMEGLTQQAIAEKLNISRIKVLRLLDRARQEGIVQI HIKPDTDEFLSMEQELIHKYHLKDCYIVPAGSGKDNQTETVAKAAAMYIQNHITDNCYIN FGYGETVMRTLSHLSRCVSATISLVSLTGGITNYLPDAHSRIYGAKLYLYPSPLIMSSKE LAASMMEEASLTEISKMTELANLTLIGIGGMNTDATILKSSRLTNNDYLLLKMQGAVGDL ITHFIDAQGRLVNSDFDARIISTPLEKLKSLNNVIGAATGVEKLPAIAAALTGSYLDILI TDDITAKQLLNNY >gi|224461045|gb|GG657759.1| GENE 348 344555 - 346117 1292 520 aa, chain + ## HITS:1 COG:PM1272 KEGG:ns NR:ns ## COG: PM1272 COG1070 # Protein_GI_number: 15603137 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Pasteurella multocida # 4 520 5 522 522 528 49.0 1e-149 MASYLMALDAGTGSVRAVLFDTAGNQIGVSQHEWEHLEDPRYPGSMDFDWNNNWALTVQC IKNVIRDTHISPSDIAAISTTCMREGIVLYDSGFREIWACANVDARSNDEVSELLSQSDT LEKEIYSVSGQTFALDAVPRILWVKNKMPELYEKTAYVSMFNDWLIYKLTGILACEPSNG CTTGIFNLATRTWDTDIARKCRIRDDIYPPVQESGTVVGHVSPGAASQTGLSECSVVVAG GGDAQLGCIGVGVVAPKQAAVFGGSFWQFEYNTDTVKTDPDCRVRVNCHAVPGIWQYEAL AFYPGLVMRWYRDAFCQLEKQKAEETGKDPYYYMNIEAEKVPAGSNGMLCAFSDIMNYIN WKHAAPTFTNFALDAEKFNRYTFYRAIMENSAMVTRGNMELVASVTGELPEEIIFASGAS KSPLWCQILSDVLGIPVHVPKVREATALGAAILAGTGAGIYKDIRRTAEELCHIESTYYP DNSNHDTYDKLYKTWKEVYRAQLELADRKLTKNMWIAPGL >gi|224461045|gb|GG657759.1| GENE 349 346147 - 346485 450 112 aa, chain + ## HITS:1 COG:STM4071 KEGG:ns NR:ns ## COG: STM4071 COG1917 # Protein_GI_number: 16767337 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Salmonella typhimurium LT2 # 30 112 2 84 88 65 38.0 2e-11 MFIINENEKEYRFGDSGPKYLMKGPRSNFAVVQFNAGQDFKAHYHNIMEENFFILEGEVD IIVDGTTHTLKAGDLIHIEPEEVHYVVNNSSGTVKMISTLAPYQESDKIEVD >gi|224461045|gb|GG657759.1| GENE 350 346535 - 347170 969 211 aa, chain - ## HITS:1 COG:PM1648 KEGG:ns NR:ns ## COG: PM1648 COG2376 # Protein_GI_number: 15603513 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Pasteurella multocida # 3 209 20 228 228 124 38.0 2e-28 MERINAQQAKEMLLYVADCIIEAKPMLTEVDSAIGDGDHGIGMAGGLKKAKDKLLKMEEP ADVYAVFTAAGKAMLMSMGGASGVIFGSMFMGGAKGMEPAGQISAGEFADMMKNSLAVIK ERGKAEVGDKTMVDAFSPAVDAMLAHAEEGFVAMLEKAQESALKGVESTKNFEAKFGRAK TQGTTIGFQDAGATSVWIIMKAMYEYVSQER >gi|224461045|gb|GG657759.1| GENE 351 347176 - 348177 1273 333 aa, chain - ## HITS:1 COG:PM1649 KEGG:ns NR:ns ## COG: PM1649 COG2376 # Protein_GI_number: 15603514 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Pasteurella multocida # 2 323 6 327 334 303 51.0 4e-82 MKKFINEADDVVDEAMEGFTDCYGNYYEKHPEVNAVILKEPRKDKVALVIGGGSGHEPMF NGFVGEGLGDAAACGNVFASPDPGTIYETALAVESGKGVLFVYGNYAGDNLNFDMAEELL EDEGIESAHVRVWDDCASAPKERLTDRRGIAGDLFVIKIAGAACDRGMELAEAVKVAERA RDNVRSIGVATTPGQIPGLDKPTFEIADDEMEYGMGIHGERGIERTKMKPADEIVEYLYH NIKSDMELSKGDEVCVLVNGLGSTTVLEMSIAYRKLKALLDADGIAVHDADINSYCTCQE MGGFSISLLKLDDTLRELYDMPCYCPYYAKKGK >gi|224461045|gb|GG657759.1| GENE 352 348202 - 348591 462 129 aa, chain - ## HITS:1 COG:no KEGG:Ccel_1035 NR:ns ## KEGG: Ccel_1035 # Name: not_defined # Def: glyoxalase/bleomycin resistance protein/dioxygenase # Organism: C.cellulolyticum # Pathway: Pyruvate metabolism [PATH:cce00620] # 2 127 3 127 128 108 47.0 7e-23 MLKAIDHITVNMTDKENSFQFYGRILGLRKLNEVDMGDHRLYYYELPGGCRLELIEYKFE STVRSGAPTDRGVYRHFALETDDIDGLKHIFTRNGVKILQGPEPSDKLGVRFMLIEEPNK VEIEFVEKL >gi|224461045|gb|GG657759.1| GENE 353 348670 - 349662 1094 330 aa, chain - ## HITS:1 COG:BS_yhdN KEGG:ns NR:ns ## COG: BS_yhdN COG0667 # Protein_GI_number: 16078018 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Bacillus subtilis # 1 330 1 330 331 319 47.0 5e-87 MEYFKTAVDGLEITRVGLGTWAMGGSGWGGIVDEPAVECVRAAIDMGITLVDTAPAYGCG HSEELVGEALSKPGYREKCVLATKCGLSWDDNGNVYRDSRPETLRKELEASLRRLKTDHI DIYQVHWPDEKTPIAETAQVMGEFLKEGKIRAIGVSNYTNAMIDEWRKTAPIHTIQPSFN ILEDKLFENQLPYAKENNITVLGYSALCRGMLHGKYTVDTKFNEGDMRAEEDPKYQGQNF VNHLAAIDELKQYAAKLGKTVAQISVRWVLEKGVSCALLGARRPDQLDFIPGCVGFSLTK EQCDEMEAIVAKHVPVQVGKDFLAPPLRED >gi|224461045|gb|GG657759.1| GENE 354 349821 - 350474 876 217 aa, chain - ## HITS:1 COG:AGl2035 KEGG:ns NR:ns ## COG: AGl2035 COG1802 # Protein_GI_number: 15891135 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 206 21 217 238 85 27.0 9e-17 MKVLKPLQMQAYEYMKEKILNNEFTPGEIYSETKIAAEIGISRTPFRDAVQRLVQEGYID IIPSKGFMLHEMEVRDIVETFQVRTAIEGYCAMLAAREAKSDRAGELFEELDRLMGKLNK FAEENNINRFVEYDNQFHLKLVAYAGNSAFDEMFGMYIHRIRNMASSSLMHPGRVAETLK EHNDIIRSMKSGDIEAVNNAISAHMERPKEIMLGTYK >gi|224461045|gb|GG657759.1| GENE 355 350688 - 351581 1024 297 aa, chain + ## HITS:1 COG:STM3248 KEGG:ns NR:ns ## COG: STM3248 COG2084 # Protein_GI_number: 16766546 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Salmonella typhimurium LT2 # 3 294 4 296 296 267 49.0 2e-71 MDKIGFIGLGIMGTPMALNLLKHQADLHVYDVRESLSDRLVSEGAVKSDPSTIGSTCSVI FLMLPSGGIVKEVLFGEEGVCAGLVPGTVVCDMSSVAPEDSLYCSRLLREKGCGFLDAPV SGGEPKAVDGTLSFMAGGDDATFQKVLPYLEMMGSSALLVGDTGTGSIAKLANQIIVNMT IASVSEAFVFATKAGADPEKVYKAIRGGLAGSAVLDAKLPMILERNFVPGGPIYINHKDI KNVVEEAHLIGTPIPLTSQLFEIMQAMKVRGHMGEDHCGIVKYFENLADCKVQKRDD >gi|224461045|gb|GG657759.1| GENE 356 351611 - 353023 1019 470 aa, chain + ## HITS:1 COG:slr1342 KEGG:ns NR:ns ## COG: slr1342 COG3395 # Protein_GI_number: 16330749 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Synechocystis # 29 465 4 435 445 263 36.0 6e-70 MNADLLHQYPLPDEAAAGRLLAEEIKMCPDKIIVLDDDPTGTQTVHGVSVYTRWDYDSIK EGFEEPGALFYILTNSRALSAAESASLHEEIAQTIHLVSQKTGIGYLVISRSDSTLRGHY PLETEVLRHTYEKITGRAVDGEVICPFFKEGGRFTVDNIHYVRSGGDLIPAAETEFARDS TFGYASSDLRQYVEEKTEGRYPAGSVICIPLRMLRGTDLDGVEALLLSAVHFQKIVVNAA DYCDLKIFSAALYRAMRKGKRFLFRCAASLVKVMAGIPDRPLLKPGELSRGSLNHGGLVI VGSYTDKTTAQLEKLTDLYGVELMEFNSDLVGKPEALETERLRILKLAGACIRDGRHAII YTKRKKLIYANDTKESVLRRSVAISDALQSFASQLEEAPSFLIAKGGITSSDIATKALHI RRATVLGQVAPGIPAWETGPESRYPGIPYIIFPGNVGERDTLRQVVTLFL >gi|224461045|gb|GG657759.1| GENE 357 353097 - 354083 1008 328 aa, chain - ## HITS:1 COG:PA1878 KEGG:ns NR:ns ## COG: PA1878 COG1896 # Protein_GI_number: 15597075 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Pseudomonas aeruginosa # 7 185 10 188 192 106 37.0 5e-23 MDSRTLLDFMSVAEKLKCTVRHSWTSSGRRESVAEHVYRLCVFAWLVQAEFPEMDSTKVM EMCLFHDLGEAVTGDIPCFEKQEKDSREEEDAVHRVAEMLPDGERRRLVSLLAELKEGVS GEAKLVHALDKMEALIQHNEAPIRTWLPLEYELQLTYGQKEAGAFPYTRQLRQTVEQDSA DKMALEGASECQEQKEAFYVSRDKGKLDLKRIVELMRQSYWAKTRSEEMIRKAMEGSVCY GVYDRDGYMVGYARIITDFATTFYLMDVIIDEVYRGKGLGTLLMDRIMDDVGSLHGVLHT EDAGAFYEKYGFVRDRRRQEVLMEKERK >gi|224461045|gb|GG657759.1| GENE 358 354089 - 354493 499 134 aa, chain - ## HITS:1 COG:CAC0907 KEGG:ns NR:ns ## COG: CAC0907 COG0432 # Protein_GI_number: 15894194 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 3 132 4 132 132 150 53.0 5e-37 MHLFEHSISTKGTEQMSKVTDMVRGDIKKSGVEQGIVVVYSPHTTAGFTINENADPDVVH DMLCGMERAVPADADYYRHVEGNSHAHIKTSFVGPSQTLILHNGDLLLGIWQDLYFCEFD GPRNRKFYVKIMEG >gi|224461045|gb|GG657759.1| GENE 359 354510 - 355367 888 285 aa, chain - ## HITS:1 COG:CAC2424 KEGG:ns NR:ns ## COG: CAC2424 COG4667 # Protein_GI_number: 15895690 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Clostridium acetobutylicum # 1 284 1 281 283 209 37.0 4e-54 MKKATIVLEGGATRGVFTSGALDYLMEKDVYMSHVIGVSAGACNGVDYVSRQPGRTRDCM IHKEKEYDYYYGFTKFIKEKSLLDMDMVFDKYPNEIFPFDFETYFASDMECEIVTTNCVT GRAEYMKEREDKGRLMKLCRASSSMPLVSPIVNIDGIPYLDGGLADSVPVKRAVELGNEK IILMLTRNPGYRKKMTSKALANVYRRAYRKYPNLVRTTIRRNFEYNKAMRLVEQMEAEGK IFVLRPLIPTVSRLEKNYDTLMEFYEHGYHLMKKEFGALMEYVDR >gi|224461045|gb|GG657759.1| GENE 360 355387 - 356655 1296 422 aa, chain - ## HITS:1 COG:MK0366 KEGG:ns NR:ns ## COG: MK0366 COG0402 # Protein_GI_number: 20093804 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanopyrus kandleri AV19 # 44 408 45 416 431 251 37.0 2e-66 MNIRFYNARILSMEEGTGIEEGEVWVKGPYIVYRGPGRPSDTVWDREIDVKGNVLMPGFK NAHTHSAMTFLRSYADDMPLLDWLNKQVFPMEAKLTSEDMYHLSKLAVMEYLTSGITANF DMYMDPVSVAEASADCGFRTVLCGAMNNFSQSLEKEEQWYKELNDHHELVSFCFGAHAEY TTSRELLEGLSELAHKYKAPVYLHNSETKEEVEQCIGRYNRTPTALLAELGIYDHGGGGY HCVYMTGEDMDIFREKGLYAVTNPGSNTKLASGIAPVKQMIERGIPVAIGTDGPASNNCL DMFREMFLVTGLAKLKESDAAAVDADEVLKMAVVNGAHAMGLHDCDVLSEGKYADLTVLD LHQPNMQPLNNITKNIVYSGSKQNVVLTMVNGRILYENGVFHIGEEPEDVYARANEIIER IR >gi|224461045|gb|GG657759.1| GENE 361 356668 - 357498 955 276 aa, chain - ## HITS:1 COG:CAC2064 KEGG:ns NR:ns ## COG: CAC2064 COG0005 # Protein_GI_number: 15895334 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Clostridium acetobutylicum # 12 272 8 268 271 238 43.0 1e-62 MYEKPDYEFYRKSAEYIREKIGTPPAVGIVLGTCLGEIEHEITDKTEIYYKEIPNFLIST APGHAGKLVCGRLGGKRVLCMAGRFHHYEGYSFEELRIPVYVFKLLGIRTLILTNAAGAV NLNYETGDICVIKDHINLCGVSPQRGENIPELGERFFSMNDVYTPSLRRLAKDAAVELGF SLQEGVYYFAPGPQFETPAEIRAMRLLGADMVGMSTVPEAITAAHCRMDVLGLSLATNLS ADRVLDHDVTEDVNNVEDVVSGRFRALLTKIVSRLD >gi|224461045|gb|GG657759.1| GENE 362 357514 - 358587 1253 357 aa, chain - ## HITS:1 COG:BS_ykrS KEGG:ns NR:ns ## COG: BS_ykrS COG0182 # Protein_GI_number: 16078419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Bacillus subtilis # 24 357 18 348 353 315 49.0 8e-86 MDGTKAAETDMAENVGLSKDGKKVVIIDQSELPARTVRLELGTPGEMFGAIQKLKVRGAP AIGIFAAYCMYCLAQQTETEDMEDFLKELEKYGAYLNASRPTAVNLSWAVRRMIRTAAEH APKGRRGVLEALGRECVKIQEEDIAMCRAISEYGLGLIREGDGILTHCNAGPLATSRYGT ALGPLILGAERGMRFKVYADETRPLLQGARLTTYELMRAGIDVTLICDSMAGIVMKNGWV QACFVGCDRVALNGDTANKIGTSSVAVLADYYNIPFYVLGPSSTIDMDCPCGERIEIELR EEEEIIKKYYKEPMAPEGVTCYNPAFDVTDHSLITGIVTEKGILRAPYEKSIRKLFE >gi|224461045|gb|GG657759.1| GENE 363 358793 - 360427 1983 544 aa, chain + ## HITS:1 COG:BS_ykpA KEGG:ns NR:ns ## COG: BS_ykpA COG0488 # Protein_GI_number: 16078507 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 532 1 533 540 762 69.0 0 MISTSNITLRVGKKALFEDVNIKFTEGNCYGLIGANGAGKSTFLRILSGQLEPSKGEVII TPGERLSFLQQDHFQYDEYLVLDTVMMGNARLYEIMKEKEVIYAKEDFTDEDGIKASELE GEFAAMNGWEAESDAATLLNGLGIDAEMHYKTMKDLNGPEKVKVLLAQALFGNPDILLLD EPTNHLDLDAIAWLEEFLINFDNTVIVVSHDRYFLNKVCTQIADIDYGKIKLYAGNYDFW YESSQLLIRQMKEANKKKEEKIKELQEFISRFSANASKSKQATSRKRALEKIELDDIQPS SRKYPYIDFRPNREIGNEVLTVDGLTKTIDGEKILDNISFTLNRDDKVAFVGGNELAKTT LFQILTGEMEPDEGTYKWGVTTSQAYFPLDSGNEFDNDYTIVEWLTQYSEEKDVTYVRGF LGRMLFAGDDGVKKVKVLSGGEKVRCLLSKMMISGANVLLLDEPTNHLDMESITALNNGL IKFPGVLLFSSRDHQIVQTTANRIMEIVPGGKLIDKITSYDEYLESDEMARKRQTYSVQN EEDN >gi|224461045|gb|GG657759.1| GENE 364 360623 - 361201 433 192 aa, chain + ## HITS:1 COG:no KEGG:SpiBuddy_2171 NR:ns ## KEGG: SpiBuddy_2171 # Name: not_defined # Def: hypothetical protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 2 179 3 180 186 109 29.0 5e-23 MPRQRITKEMVVKAAFDLARDGGMENVTVKGISQKLGCSVQPVYCYCSNMNGLKQDVIEY TGGYLRDFIKKRLDDTDLFQSMGIAHAEFAKTEPHLYRLYFLRKRDGVTSIEDIYREETD PQVAEFISQQLHLPIEKAQQLHMNMLIYNTGISFLLTVLGGNTDIGQIERLLTQAKEIFT HSLITDNEQEIT >gi|224461045|gb|GG657759.1| GENE 365 361201 - 361707 302 168 aa, chain + ## HITS:1 COG:no KEGG:bpr_I0658 NR:ns ## KEGG: bpr_I0658 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 165 1 174 183 106 37.0 3e-22 MKTLIIYHSKTGFTKKYAEWLSEASGCTLLPFDNAKKADFAPYDTVVFASSFQAGTIRKL NAFKNLKLNGKNKIVIVTGCTPPGSPEVDTAVQNNFKTDAGAYKVFYLPGGLSYERMGAA GKLMMSAFCKMIKKSAGEDSEMYSRISHSYDNTSKEYLQPVINYLNSL >gi|224461045|gb|GG657759.1| GENE 366 361770 - 362774 1262 334 aa, chain - ## HITS:1 COG:CAC0626 KEGG:ns NR:ns ## COG: CAC0626 COG0180 # Protein_GI_number: 15893914 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 332 9 343 343 400 56.0 1e-111 MIKDRKVLFSGMQATGSLTLGNYLGALKNWVTLSDEYECFYSVVDMHSITVRQDPATLRK RARALLTLYIAAGLDPEKNCIYYQSHVSGHAELTWILNCFTYMGELNRMTQFKDKSAKHA DNINAGLFTYPVLMAADILLYQADVVPVGIDQMQHLELTRDIAERFNNIYGDVFTVPEPY IGKVGAKIMSLQDPAKKMSKSDENPNASIYLMDDPDTVMRKCKRAVTDSEAHILYRDEQP GVKNLVDIYSACTGKTPDEVVAEFDGKGYGDFKMAVGEAVVSVLKPLQDEVARLEKDKAY IDSVIKTNAEKAQYFANKTLRKVQKKVGFPERIR >gi|224461045|gb|GG657759.1| GENE 367 362794 - 363795 725 333 aa, chain - ## HITS:1 COG:RSc0499 KEGG:ns NR:ns ## COG: RSc0499 COG0406 # Protein_GI_number: 17545218 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Ralstonia solanacearum # 121 278 13 168 227 105 36.0 1e-22 MACISAVFMTGSWFGLVIRRSNVVIVCPPGWSFRDTYTPGSNLVWSIVKLVIFSIYIFSF AYMMPAALGRRVCVPAGTMRIIALLFVIFYEKQQEMCYTIKVALSGRSVCFSPVRAHRRR QIMKIYFVRHGETDWNKARRIQGQVDIPLNEFGRHLAEETAKGLAEVPFDICYTSPLDRA VETARIILGDRAVPVIKDARIKEMAFGEYEGKCCSKKGWELPREFQRFFDDPEHYIVPDA GEGFADVKKRTGEFLEELFQRQDLKDASVLVTTHGAALAGILNNIKGRPLCDYWGVGVHK NCAVTEVEVSDSGARIIAENVVYYNDEVAPWEE >gi|224461045|gb|GG657759.1| GENE 368 363632 - 364111 490 159 aa, chain + ## HITS:1 COG:CAC2942 KEGG:ns NR:ns ## COG: CAC2942 COG1854 # Protein_GI_number: 15896195 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Clostridium acetobutylicum # 1 159 1 158 158 231 66.0 5e-61 MEKITSFTIDHTRLLPGVYVSRKDHPGGQTITTFDLRMTRPNHEPVMNTAEMHAIEHLAA TFLRNHAKYGDRTIYFGPMGCRTGFYLLLSGDYESRDIVPLMKELFAFIADFEGEVPGAS EKDCGNCLDMNLPMAKYLAGRYLKEVLEQITDRQLIYPE >gi|224461045|gb|GG657759.1| GENE 369 364131 - 364574 481 147 aa, chain - ## HITS:1 COG:CAC2491 KEGG:ns NR:ns ## COG: CAC2491 COG0454 # Protein_GI_number: 15895756 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 141 1 141 155 120 45.0 7e-28 MEYRKATEKDIDLISEIRRVQLIHEKAHEEVEIREELRTFFEHAFADNRIVQILAEDNGT VAATGAVIFYDYPPSFSNPSGKVAYIANMFTALDHRRQGLACRIMDLLVDEARKAGAGEV RLLASEPGRPVYETYGFTAEDGWYVLE >gi|224461045|gb|GG657759.1| GENE 370 364656 - 365321 733 221 aa, chain + ## HITS:1 COG:BH1258 KEGG:ns NR:ns ## COG: BH1258 COG2364 # Protein_GI_number: 15613821 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 8 191 15 196 234 93 36.0 2e-19 MAVSYIKRFIRLLAGLFLFALGTCFIVQADIGLAPWDAFSMGLSLATGLSFGDIVIVTGI LILVVDYLMHEQLGFGTILNALLIGKFIDLLQWSGIVPRMEHLSSGIVMLLAGEIIICLA TFLYVGTGLGCGPRDALMVALGKRFQEKPIGLIRGIIEGSVLLAGWLLGAKIGIGTVIAV FGIGFILQFTFKLLRFDVTSVRHESILDTLRIWKGRKDKTS >gi|224461045|gb|GG657759.1| GENE 371 365318 - 365803 544 161 aa, chain - ## HITS:1 COG:alr4250 KEGG:ns NR:ns ## COG: alr4250 COG0454 # Protein_GI_number: 17231742 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Nostoc sp. PCC 7120 # 6 160 7 162 164 151 50.0 5e-37 MKDSKVTFRFAGREDAGLILGFIKKLAEYEHMEEDVVATEALLREWIFEREKAEVLFALS EGKEVGFALFFHNFSTFLGRAGLYLEDLFVLEEERGRGYGKALLKKLAAIAVERGCGRLE WSCLDWNEPSIEFYRSLGAEQMDEWSVYRLSGETLRQAAER >gi|224461045|gb|GG657759.1| GENE 372 365816 - 366175 473 119 aa, chain - ## HITS:1 COG:lin2188 KEGG:ns NR:ns ## COG: lin2188 COG0239 # Protein_GI_number: 16801253 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Listeria innocua # 2 119 4 121 129 75 39.0 3e-14 MIIVGLGGALGAMCRYALSLIPWRGEFPVLTLITNLAGVLLIGLVTGIAQSSGTMRPNLL LFLKTGVCGGFTTFSAFSLETITLIERGNRLYAAAYVLLSVAGCLCGAWLGRRAGSRMI >gi|224461045|gb|GG657759.1| GENE 373 366172 - 366753 501 193 aa, chain - ## HITS:1 COG:L19745 KEGG:ns NR:ns ## COG: L19745 COG1247 # Protein_GI_number: 15673759 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Lactococcus lactis # 1 187 1 186 187 160 41.0 1e-39 MKIRMAEEKDAAALLAVYAYYVEQTAVTFEYKVPSTEEFTRRMRSVKEKYPYLMAEEDGE VCGYAYVSAFKDRAAYDWAVETTVYVDRQKRSFGVGRRLYETLEEILKLQNIINLNACIA WPNPDSISFHERMGYKTAGHFTKCGYKQGRWYDMVWMEKMLGGHPLKPEPVVRADEIDRD TLEKILGRTGWTK >gi|224461045|gb|GG657759.1| GENE 374 366750 - 367592 788 280 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568217|ref|ZP_03777242.1| ## NR: gi|225568217|ref|ZP_03777242.1| hypothetical protein CLOHYLEM_04291 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04291 [Clostridium hylemonae DSM 15053] # 1 280 5 284 284 474 100.0 1e-132 MSVILDIVLVLAAVFVLTGAAVKEICAEAVTEAVIKQAATSAAADGIHTMFPGATQEQIE NAADKISRDEHLRALVGDYLDAVAEASADGTPFQSPDVSSYINEAVDDNIDSLEKAFGVE LNELHRSILKSALSSVGEQMETELGTAADEALSGMTDGQKLIFKMYGFMTSETVRMVAVA IAGMCVLGIVLLRLSGGHFLFHLGLCGILTGSTAGCIFPAVLSAAADELGRQMMGSQITV SADTLAGSGKWLLAAGTALLAVYLLLRLFCGRGKKKRYRR >gi|224461045|gb|GG657759.1| GENE 375 367626 - 368150 630 174 aa, chain - ## HITS:1 COG:L67226 KEGG:ns NR:ns ## COG: L67226 COG1335 # Protein_GI_number: 15672251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 2 173 4 170 171 168 50.0 6e-42 MKILVVVDMQNDFVDGALGTEEAVGIVPAVAEKIRNFEGRVLYTRDTHESDYMDTQEGKK LPVPHCIRGTKGWEICPQIEALCSETPIDKPSFGSVGLGQVLKAYDSQEEKVESVTFVGL CTDICVISNVLVVKAFLPETELIVDASCCAGVTPQSHRQALEAMKVCQVSIVNE >gi|224461045|gb|GG657759.1| GENE 376 368306 - 368782 582 158 aa, chain - ## HITS:1 COG:MK0151 KEGG:ns NR:ns ## COG: MK0151 COG1720 # Protein_GI_number: 20093591 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanopyrus kandleri AV19 # 8 146 29 170 173 88 36.0 4e-18 MTVFEVRPVGKISSTEEGTCIKLERQYIPALTALDGFSHINVIWWFSEFDYEEARTVLET EQPYKKAPADMGIFATRSPIRPNPVALTVSEVIGIDYENGVIDIAYTDADDGSPVLDIKP YTPSLDRVEDPHVPDWCGHWPKSLEGAAQFDWEDEFNF >gi|224461045|gb|GG657759.1| GENE 377 368823 - 369656 636 277 aa, chain - ## HITS:1 COG:all0345_1 KEGG:ns NR:ns ## COG: all0345_1 COG0789 # Protein_GI_number: 17227841 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 1 103 21 124 135 87 48.0 2e-17 MFRIGEFSKLTQVSVRMLRYYDDAGLLKPERTDPQTGYRMYSAAQIPVLNRIIYLRDSGF GVAEIMEAVNSGDDKFIIRQLDKKYGEITGRIEEEQMRLERIKLAREELSYGGRMHYNVS IKSIPPCSVLSLRKVIPTYYAEGELWEELSVFAKSHKITVSEETFSIYHDTEYKERDVDV EICAPVDKPGRGTGAFSFRTVEEVPYMACTMVYGAFSNIAGAYAALAEWLQQNRLYRMTG QSRQIVHRGPWNEEIEEKYLTEIQIPCLTLTRCQGPE >gi|224461045|gb|GG657759.1| GENE 378 369804 - 370160 522 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239625929|ref|ZP_04668960.1| ribosomal protein L20 [Clostridiales bacterium 1_7_47_FAA] # 1 118 1 118 118 205 84 7e-51 MARIKGGMNAKKKHNRTLKLAKGYRGARSKQYRVAKQSVMRALTSAYAGRKQRKRQMRQL WIARINAAARMNGLSYSKFMHGLKLADVDMNRKMLAEMAVNDAAGFATLAELAKSKVA >gi|224461045|gb|GG657759.1| GENE 379 370193 - 370390 240 65 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228582464|ref|YP_002853165.1| ribosomal protein L35 [Clostridium sp. 7_2_43FAA] # 1 65 1 65 65 97 73 4e-18 MPKIKTNRAAAKRFKKTGTGKLVRNKAYKSHILTKKSTKRKRNLRKPTVTDATNVKNMKK VLPYL >gi|224461045|gb|GG657759.1| GENE 380 370425 - 370919 401 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 2 164 1 165 166 159 47 8e-37 MINGQIRDKEVRVIGEDGEQLGVMAARDAMKLAAEAELDLVKIAPKAQPPVCKIIDYGKY KYELARKEKEAKKKQKTVELKEVRLSPNIDTNDLNTKINNAKKFIGKGNKVKVTLRFRGR EMAHVHQSRHILDDFAEQLADVATIEKPAKMEGRSMSMVLTEKR >gi|224461045|gb|GG657759.1| GENE 381 371251 - 372624 1470 457 aa, chain + ## HITS:1 COG:BH1128 KEGG:ns NR:ns ## COG: BH1128 COG0733 # Protein_GI_number: 15613691 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Bacillus halodurans # 2 442 6 447 453 269 40.0 8e-72 MQQKRSNFSSKLGFVLAASGSAVGLGNIWRFPYLAAKYGGGTFLLIYLILAVTFGFSLMI AEIAIGRKTGLSAIGAFKMLDKRFGFLGILASAVPIVIFPYYSVIGGWVVKYFTVFISGG AGASAADDYFSTFISGTFEPLGWFFIFLAVTALIVLCGVEKGIEKVSKIMMPILVVLTLV ISVYGLTREGAMEGLVYYIKPHMSDVSAKTILAAMGQLFYSMSLAMGIMVTYGSYMKKDN HLESSVRQIELFDTGIAFLAGLMIIPAVFAFSGGDESALSAGPGLMFITLPKVFASMKLG GAIGTIFFLLVFFAALTSAISLMETIVSIFRDKFNWSRKGACIFVAVLALIMGAPSSLGF GPLSFISWMGMSVLDIMDFVSNSVLMPIVAFFTCIFVGFFIKTKSISDEVRVTDGKFKAE KLFTVMIKWVAPIFLLLILLSSVGGALGIDFLQALSV >gi|224461045|gb|GG657759.1| GENE 382 373435 - 374100 676 221 aa, chain - ## HITS:1 COG:BH1019 KEGG:ns NR:ns ## COG: BH1019 COG3382 # Protein_GI_number: 15613582 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 1 199 1 202 224 102 33.0 7e-22 MKKLIIDARMKELWPSVRVGCMQYKVKVEKKNEEMWSYLKKDIFKKAKDNIFDHGINDIP NIRESRLAYKAFGKDPSRYRVSSEALIRRIGQGKGLYEVNTVVDVNNMISIESGFSVGSY DTANIGDELIFRIGREKETYKGIGKEEVNIENLPVLADEKGAVGSSTSDSERAMITESAE EVLTLIYSFSDNKDLEKALEYGRAYMEKYAGAREIKCWVVE >gi|224461045|gb|GG657759.1| GENE 383 374252 - 375115 914 287 aa, chain - ## HITS:1 COG:BS_yitS KEGG:ns NR:ns ## COG: BS_yitS COG1307 # Protein_GI_number: 16078175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 6 281 5 279 283 172 33.0 1e-42 MRDYVITVNSTVDLPKEWLQERNVPVIPLHYTIDGQTYPDMEGLTSKEFFDKLREGKMSV TSQVNPEEAKEALEPIIKEGKDVLHLGFSSGLSGTCNSMQIAAAELSEAYPEAKVIAIDT LCACLGEGLLLYKALQLREAGKTIDETAQWVEENKLHVCHNVTVDDLNHLHRGGRVSKAT AVVGTMVKIKPIIHMDNDGTLQVVGKERGRKKSLNHIVDMAAEQSRGWENDIIMITHGDC VDEAEYVASLVREKMGVDNILINNIGTVIGSHTGPGVVAVFNMGNKR >gi|224461045|gb|GG657759.1| GENE 384 375119 - 376540 1621 473 aa, chain - ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 18 445 7 433 448 310 40.0 5e-84 MEVQNQQKNNDSGRDERLGTAPLGRLMAGMAVPAVAAQLINVLYNIVDRIYIGHISGYGD VALTGVGVTFPIIMLIAAFSAFAGMGGAPLASIQLGKKDHDKAERILGNSAGLLIIFSVV LTVFFSIFKTPILYAFGASGQTISYAESYIAIYLIGTVFVQIAVGLNTFISGQGEARIAM LSVLIGAVINIALDPVFIFALHMGVKGAALATIISQAVSAAWVLRFLLSEKSVIRLRVKY MKLQGDIVKHIAGLGVSPFIMQSTESLVSITLNSGLQRYGGDLYVGTMSIMTSVMQLIVI PVQGITQGIQPIISYNYGAGNRKRVKGAFIRMLLVCFAGTLLLAGIAVTVPEVYASLFTN NDKLVALTCRVMPIYFFGIMIFGIQSACQSTFLALGQAKVSLFIALLRKVILLIPLAVIL PKFMGVMGIYRAEPVADIISVLTTSVLFAFTFKNVLLNMRKSGMMSAGKEKED >gi|224461045|gb|GG657759.1| GENE 385 376676 - 378037 1424 453 aa, chain - ## HITS:1 COG:no KEGG:Closa_1011 NR:ns ## KEGG: Closa_1011 # Name: not_defined # Def: GerA spore germination protein # Organism: C.saccharolyticum # Pathway: not_defined # 10 448 6 444 469 554 58.0 1e-156 MPEKKKVTASREESTEYLNKVLPVQDSFDIIQRDMMIGGRVASFYFIDGFTKDESMLKIM DSMFKVTEEDMPADATAFARECIPYVEVDIIGDFDQVLRNILSGVTCLFIEGYEACIAID CRTYPARSVEEPDKDKSLRGSRDGFVETIVFNTALMRRRIRDPHLTMQMLEVGDSSRTDV AICYMKDRVDTELLNTVMTRIKSIKTDDLRMNQQSLAECLYKRKWFNPFPKFKFTERPDT AAACLLEGKVVILVDNSPSAMILPTSILDMIEEANDYYFPTLTGIYLKVSRALITIMTVF LTPLFLLFMQNLNWLPDAFAFVAVKDMVNIPLIFQLLILEIAIDGLRLAALNTPSMLSTP LSVIAGLVMGEFSVKSGWFNSEVMLYMAFVAVANYTQPNFELGYALKFMRLLLLVLTALF NWIGFAAGCIIIVCSICFNKTLSGRNYLNIKLN >gi|224461045|gb|GG657759.1| GENE 386 378204 - 378719 676 171 aa, chain - ## HITS:1 COG:SP0021 KEGG:ns NR:ns ## COG: SP0021 COG0756 # Protein_GI_number: 15899969 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Streptococcus pneumoniae TIGR4 # 41 171 18 147 147 103 46.0 2e-22 MAKRVAQFHKVSFEQFKEDFRDTFGAVEDKEIQEVYDAVRLPKRATAGSAGYDFFTPVPV VLHPGKTVKIPTGIRAEMQDNWVLKCYPRSGLGFKYRLQLNNTVGIIDSDYFYSDNEGHI FAKITNDTNEEKTVELEAGAGFMQGIFVEYGITMDDDVTEIRNGGFGSTSN >gi|224461045|gb|GG657759.1| GENE 387 378712 - 379200 613 162 aa, chain - ## HITS:1 COG:HI1155 KEGG:ns NR:ns ## COG: HI1155 COG0602 # Protein_GI_number: 16273080 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Haemophilus influenzae # 1 146 1 150 155 137 42.0 1e-32 MRYHNITKDDMLNGDGLRVVLWVSGCSHGCKGCHNQVTWNPDDGLLFDEDARQEIYAELG KDYVNGVTFSGGDPLHEANIKEITDLAREVKEKYPDKTIWLYTGSVWDEIKDLEVFDYVD VLVDGEFVEEKKDSTLHWKGSSNQMVIDVKNTKKTGEIVLHG >gi|224461045|gb|GG657759.1| GENE 388 379204 - 381333 2263 709 aa, chain - ## HITS:1 COG:VCA0511 KEGG:ns NR:ns ## COG: VCA0511 COG1328 # Protein_GI_number: 15601271 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Vibrio cholerae # 7 706 5 702 706 313 31.0 6e-85 MKNEVKVVKKDGTKEEFNVQKVVVAVNKSAYRALVKFTEEELGFICSFVEEKVDARNVAE IPIAEMHNVVEGALEKVNPVVAKSYRDYRNYKQDFVQMLDEVYKKSQSIMYIGDKENSNT DSALVSTKRSLIFNELNKELYKKFFLTVEEVQAIRDGYIYIHDMSARRDTMNCCLFDVKA VLNGGFEMGNLWYNEPKTLDTAFDVIGDIVLSAASQQYGGFTVPSVDEILAPYAEKSHRK LIEKYRGLGLEEETVQNIAWADLEKEMEQGFQGWEYKFNSVSSSRGDYPFITVTAGTVTD KYGKLATKKMLEVRGSGQGKEGHKKPVLFPKIVFLYDENLHGPGKPLEDLFEAGIECSAK TMYPDWLSLTGDGYVASMYKKYGKIISPMGCRAFLSPWYENGGMEPADEQDEPVFVGRFN IGAISLHLPMIYAKAKQESREFYEVLDYYLELIRQLHIRTYEYLGEMKASTNPLAYCEGG FYGGHLGLYDKIKPLLKSATASFGITALNELQQLHNKKSLAQDGQFALDTLQHINDKINE YKEKDGHLYAIYGTPAENLCGVQIQQFRKKYGIIENVSDREYVSNSFHCHVSEEITPIQK QDLEGRFWNLSNGGKIQYVKYPVNYNKEAIKALVRRAMEKGFYEGVNLSLSYCDDCGHEE LSMDVCPVCGSKNLTKIDRMNGYLSYSRVKGDTRLNAAKMAEIAERKSM >gi|224461045|gb|GG657759.1| GENE 389 381555 - 382328 214 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 254 1 245 245 87 27 4e-15 MLELRGIEKYYNPGTINEMCLFHDFHLKIEQGEFLSVVGSNGSGKTSMLNIICGSIPLEA GRILINDKDITKEKEYRRNERIGRVYQNPAMGTCPSMTILENMSLADNKGRLYGLGRGTN KARIGYYREQLSQLGLGLEDKMDIKVGSLSGGQRQAMALLMSTMTPIEFLILDEHTAALD PKTAELIMELTDKIVKAKHLTTIMVTHNLRYAVEYGNRLLMMHQGEVILDKKEEEKESIT VDDILKLFNEISIECGN >gi|224461045|gb|GG657759.1| GENE 390 382321 - 383202 1205 293 aa, chain - ## HITS:1 COG:FN2080 KEGG:ns NR:ns ## COG: FN2080 COG4120 # Protein_GI_number: 19705370 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Fusobacterium nucleatum # 3 291 1 278 278 224 46.0 2e-58 MNLIVTIIEQGLIYGILALGVYITYKILDFPDLTVDGSFPLGAAITAALVTRGVNPYVAL LAAFAAGVLAGVCTGLIHVKCRVRDLLSGIIMMTALWTVNLYIAGTSNVPLFSQKTIFKN DMISSIVPEALKPYTTLIVILILALISKVLLDLYLKTKSGYLLRAVGDNDTLVTSLAKDQ GNVKILGLAIANGLVSLAGCVFAQEERVFEISMGTGAIVIGLASVIIGTSIFKKVTFLKA TTAVLAGSVIYKACVAVALKNFEPQAMKLITAVLFLIILIISMERKKKVNKNA >gi|224461045|gb|GG657759.1| GENE 391 383239 - 384255 1346 338 aa, chain - ## HITS:1 COG:PA3836 KEGG:ns NR:ns ## COG: PA3836 COG2984 # Protein_GI_number: 15599031 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 28 331 22 322 325 196 38.0 4e-50 MKKKLTAGLLVTAMTAVLVTGCGDSSKSSGSAEKENYTIGIEQFAEHGSLDNCREGFLQG LEDEGIKEGDNLTVEYKNAAADMGTAGQISDSFVSDKVDLICAIATPTAQSAYNAAMDSQ IPVVYTAVTDPVAAELADEEGTPVGEVTGTSDKLPVEEQLKMIREMLPDAKKIGIMYTTS EANSVSAIAEYKELVGKYDFELVEKGITATADVSLAADDLLSQVDCITNLTDNTVVASLP TILEKANSKKIPVFGSEIEQVKIGCLAAEGIDYIALGRQTGKMAAQVLKGEKKASEMNFE LITEPGFYVNTKVAENLGISVPETLSADAVESFDEITE >gi|224461045|gb|GG657759.1| GENE 392 384742 - 386127 1082 461 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 5 460 3 456 456 421 47 1e-116 MFDAINSFVTTINGWVWGWFMIILLFGTHVFMTIRTGFIQRKTLSKGIKLSVTKDPEAEG EVSQFGALTTALAATIGTGNIIGVGTAIAIGGPGAVLWCWLIGVFGIATKYSESLIAVKY RVKTEDGRMQGGAMWALERGLNMKWLGVTFAVLAGFASFGIGCATQVNAIATVCNENLGI PKWPVGIVVAVLTGIVIFGGIKSIARVCEKLVPFMAIFYVIGCIVILCMNYDFIIPALAT IGRLAFTPGSAAGGLVGGGLMIAMKMGAARGLFSNESGMGSAPIAAAAAQTRNPVRQALV SSTGTFWDTVVVCAMTGLVLVTTIMKNPSINADTIENGGVLTSMAFSQIPYLGPVILTLG IISFAYSTILGWAYYGERCVEYFAGSKVMFVYRIIYLLVAAIAPIIALDLVWLIADTLNA LMAIPNLVAVLLLSNVIVKETKKYINDLDAKDDTPVPVIKD >gi|224461045|gb|GG657759.1| GENE 393 386628 - 386852 335 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568238|ref|ZP_03777263.1| ## NR: gi|225568238|ref|ZP_03777263.1| hypothetical protein CLOHYLEM_04312 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04312 [Clostridium hylemonae DSM 15053] # 1 74 1 74 74 89 100.0 1e-16 MARRTKSYEEQLGALDEQIAKVQGRLDALCRQRDEVAARQQEQELKALYELLRENHLTVQ EAADIINAEEGQST >gi|224461045|gb|GG657759.1| GENE 394 386958 - 388115 1019 385 aa, chain - ## HITS:1 COG:lin1074 KEGG:ns NR:ns ## COG: lin1074 COG1887 # Protein_GI_number: 16800143 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Listeria innocua # 9 374 3 374 384 147 26.0 2e-35 MRKYFGRGWLRKVYSAVCEYALRWLAVLPAKKNKVVFDNFGGRGFGCDPKYIALELLRSE EALDLVWLARDLTEEFPPGIRPVKYGGARALYELATAGVWVDNFKSAMRVPKKEEQYYIQ TWHSSLGLKKNERDAAQLDRSYVKRARKDAAATDLMYSNNGFREEKYRKRFWYNGEVLRC GHPRNAVLMRPPEAVRNMVRGAYGLEADTRILLYAPTFRSRADREVYRFCAGPCLKACEK RFGGKYVCFERLHPNVADLVSEAEEGDRVREVTDYPDMQELMAAADLLVTDYSGSMFEFM LTGKPVFLLAKDLNEYVEEERELYFSFDELPFPAARSEEELACRILSFDAGKYREECRDF MERTDMREDGRGAEVIAHIILEKIK >gi|224461045|gb|GG657759.1| GENE 395 388146 - 389438 1151 430 aa, chain - ## HITS:1 COG:no KEGG:Amir_3209 NR:ns ## KEGG: Amir_3209 # Name: not_defined # Def: hypothetical protein # Organism: A.mirum # Pathway: not_defined # 28 349 154 477 561 89 25.0 3e-16 MWILTAIVLLAAGALMLSKYNAVRTFYFEETKDMVANPYQGAYFQWSAGDAEGLGDVVRR HPDYRVVLLTYDLDDERELDVIPEDKLNKLSRALDKAEELKLSVIFRAAYDFAGEYEDPA FEIMLAHIRQIGEVLNEHKSCLAGVQAGMIGAFGEWTQSRYMDEKRYRMEVVEEWEKTLD RAIPISVRRQKFIREAKERGLDTERLGVYNDGLFSSESDLGTYREDYGREDDLIWSAENI KVPFNGGEMPFVSGFSQIGNVVKEARQLSLSYLNQEYNYEVWELWGGQKYRGMPGDAYIK MYLGCRPWVKTLKTDRHYERKETIQIEADVRNSGFAMLSPAYHVYFVLKCGEKTVKVEAG GGMEDKEKGTFRAAADNPFAGEEGEKEGIAVGIQISRESEEEIKEPYCLRLANEKIVYEN GINFLICPKR >gi|224461045|gb|GG657759.1| GENE 396 389486 - 390472 683 328 aa, chain - ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 1 226 5 227 328 157 37.0 2e-38 MISIIVPVYNVEKYLEKCICSILDQTYRDFELILVDDGSRDKSGGICDAYKKKDGRIRVF HQENKGLSGARNAGLARASGEYITYIDSDDSVDPHYLEVLFENAQKYGAEVSVCGYRSVW EDRGRKSRPEKVKTSVRICTGREAVYKIVAENDRKMITAWGKLYHARLKPLLEYPQGRTH EDEFVTYRVLYIADKVVISPQELYGYLQRGDSIMNSSYSERRLDKIRALEEAVDYFRKEG DKELERYAEKRYLLQLSIAWYRVSVFLPERKDLTARLREEWLAGYRAYRENIKDAVKMTD RAALKIYRASPRMYGVIAGIFEKIFREV >gi|224461045|gb|GG657759.1| GENE 397 390485 - 391549 749 354 aa, chain - ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 3 230 5 232 344 107 31.0 3e-23 MEISFIIPVYNGEACVGKCIGEIRKWNKDERIEIIVIDDGSDDDTWNILNRAAKNDPRIK IIHIENSGQGIARNCGLQAASGKYVCFADADDWVDVKAVYRLYKKAKETEADVTMGGYYR VEKTGTKQVHVPGSGYIRRKGRPDEVKRYHCVKTESAFGYVWNKLYRRKFLTDNHLAMDD IRKVNMEDFLFNLKVWSRGPVFYCMDCPVCYYVTEHPSTTRKPDSDVHTKSAAMIRELIL YLEENGVLEENLDMVIPLTARTFCWSLIKNIPYEGKSLAALRRRACTFSEEEKISETVKN CRASMYLRELPSLPQRLFYTLCLRAVRRGKVEWICMLFYLFYPVMKRYAASVLK >gi|224461045|gb|GG657759.1| GENE 398 391554 - 393020 1338 488 aa, chain - ## HITS:1 COG:no KEGG:BcerKBAB4_3391 NR:ns ## KEGG: BcerKBAB4_3391 # Name: not_defined # Def: polysaccharide biosynthesis protein # Organism: B.weihenstephanensis # Pathway: not_defined # 4 477 9 485 512 195 29.0 3e-48 MQWNIIVSMLSQIVSLIINLISKRVICIYLNVEYLGLQSLYSNFCDVLSFAYFGAGTAML FSFYGPLARNDKAQLTAIYRHYDNIYKKMTWILTGAGILTTLPAVFSVNASIKDTEVAVT FLTFMLSIVLYNRYMVRNYFIQADQRRYFVAAVTGGVDAAALAAEILVLKFFRSYEAFVI CILFKNLLINHIFGRYLKSRYPFLFVYTEPLGSAETERIKSNVSDMVMYRFGKVLISNTD NIFISRFISTAMVGVYSNYQFIIAGITSLVSAFYEAITARVGQMLSVKGTEEQYAQFRFY SFLNSWMTGATVVCFYYLVQDFLKLWMGSVPQLTKEIILIIIVNYYLETCRFATKMYREG AGLFRNIKQMILIKGLLNIVLSFIMGKMWGLAGILTATTISSAVTLFWYEPLVVYRYFKK SYINELYYQVLTLLQMACSFMAAGLVSGCFSGSGTGGFLLKGAACAAAANICYILFYLAL RMIRKKQG >gi|224461045|gb|GG657759.1| GENE 399 393034 - 394491 1258 485 aa, chain - ## HITS:1 COG:CAC0735 KEGG:ns NR:ns ## COG: CAC0735 COG4267 # Protein_GI_number: 15894022 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 463 1 460 478 192 29.0 1e-48 MAGIGFELKKIYRKESISRGMLGVVYSSVVTVGPMLMVIAAILLLYFFLGMTKVSYADRE LLSSTILYTFIFSVILTAPFNVVFSRYLADKFYTEEYSNILASYYTGNSICCILATVLFL PVGWSLRVRGGIDIPFILAAYVQWISLVILFFAITYLHATKDYKIIALFFFIGMFVCFLS AFAFYKLLDQDAVHSIIYGLSLGFFLIAVLDFSYIKRYFRSVSRAYGECLPYLGIFKKLL AANLFYILGLYVHNFVFWTAPSRLFVASTFYSHQAYDMASCLAMFTNISVMISFMVVVET RFHNAYKEYMEGVIGGTYKMIVKARKKLFRTLSQQIIQVFGTQMAITSVIFLFLILFGTK IGFDSVTMAIYPVLVVAFLGIFMMYGNIIYLYYFADMTGAVITGALFFAVTLAASLLSST WSVPFWGAGVFLGMLAGWTYSFFRIRWIERNLDTFIFCDYKVIDTMKSSSKGKIIYRKKE NNAAG >gi|224461045|gb|GG657759.1| GENE 400 394491 - 395912 1267 473 aa, chain - ## HITS:1 COG:CAC0734 KEGG:ns NR:ns ## COG: CAC0734 COG0438 # Protein_GI_number: 15894021 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 1 465 1 466 471 410 41.0 1e-114 MKVCLIVEGAYPYVTGGVSSWVQGLMLSMPDVEFVVQTIAASPDERQQFKYKIPSNVSEI QEVYLLDDDYVDNRTQKKVSLTGEEYDAFENLLFESSPDWSVIIRFFAEKDVSLNALLSG KDFFKMSLDYYNANFRRVVFSDFLWTMRSLYLPLFTILKSRTERADLYHSVSSGYAGIWG SMQKCLHGAPFLMSEHGLYTREREEEIIKADWVSGIYKDIWIDQFKKIGECCYEYADRVV SLFDDARAFQIELGCAKEKTVVIPNGVDYRKYEDIPGKEAGDRGINIGAVLRVTPIKDVK TMLSAFALARNKNPKLKLWIMGSMEEAKEYAQECRDMVRDMEIENVVFTGTIDVKEYIGK MDFLILTSISEGQPLSILEGFAAKRPCIATNVGNSRGLIEGERDDYGHAGYIVPVMGVSE IARAILRLAENETERRKMGEAGYRRVRAYYDEEEVFGKYRSLYEEMTKSREGR >gi|224461045|gb|GG657759.1| GENE 401 395909 - 397564 1360 551 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568246|ref|ZP_03777271.1| ## NR: gi|225568246|ref|ZP_03777271.1| hypothetical protein CLOHYLEM_04320 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04320 [Clostridium hylemonae DSM 15053] # 1 551 1 551 551 1105 100.0 0 MKLLNKLDFSKNNQLRRYIFVYTVVILFCLLCVFLFMGNLNNIWRSLQAKDELEVDQRAE YKKVVRLAGKQENAPAENRQKEASDIMIWGQGGGFKVASLQLQNMKEKFQVKEQLEDCGR AEILFVCRTFFQQDEIELLRRYNEAGMTLFFTNIPDAGALEDAGVRSLTGVERYKGMQKK TGIRLTEKLLFGSITENKEKFSLKAVTLKPQTEVYASALEKGDVKSENLSPVFWRYKRNV SCGSVYVADRQLMSGPVGYAAVSFLFTDLYQVYMYPVINAYCFAVSGMPYTDEFSSEFLD KEYERDSLGVQNDIFFPEFKRCEERYGAETTWYSTDKKKLKKTGNELLKYHLEGIEEKKD EIGTAGAEETVDSPFGNRLALWTSSFQWTDDESREVCLPYNLIKDEKYDNVIFDNLGLCR GAGFNAVYADVKPFLREPEKKEEDDWVDFCRSMETVLGVEKEHLSWLERVTVGEAIYRVK AFDMMKPKIDYSGTRIDADIGNFTGRAYFYLSLPGTVKTVKNAELTKLYDGFYLVEAADE HVSIEYEEKER >gi|224461045|gb|GG657759.1| GENE 402 397561 - 398307 576 248 aa, chain - ## HITS:1 COG:SPy0794 KEGG:ns NR:ns ## COG: SPy0794 COG0463 # Protein_GI_number: 15674837 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 234 1 221 231 137 38.0 1e-32 MKKILIIIPAYNEEENIGLLLNGMSVMGIKEFMDVLVIDDGSLDHTAQIAEDSGFKVIRL IFNMGYGAALQTAYKYAAANDYEYLLQIDADGQHDLSNIKTVCERLGCFGSEKGGHPDIV IGSRFLEGSKSFHISAMKKCAISCFRWIIRRVTGQSLTDPTSGLQGLNRRAFSFYSRYNN FDLKYPDLNMIVQMLLLGFKIEEVPAVMCERTAGESMHSSWLKAGKYMILMLLGTWNAYV RCKTGSRT >gi|224461045|gb|GG657759.1| GENE 403 398304 - 400523 1623 739 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568248|ref|ZP_03777273.1| ## NR: gi|225568248|ref|ZP_03777273.1| hypothetical protein CLOHYLEM_04322 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04322 [Clostridium hylemonae DSM 15053] # 1 739 1 739 739 1431 100.0 0 MIWENVWTIIWSMAGYLFLTLVLPSVCLGKYVAQKERTFRFFCYQCLGNLYINYIVLLLG FLHFVNFASLLFTLVLLPLSLTAVRERKRIAVRYRKWIKVLKELIIGTYGFHVLRARVNS RIRSYLAEKKRLLNGNLLEMILFGLVMAWIVWFYGWYKLHNTAYGHTDEETHLYWIGSLI HGDIFPAGMYPHGVHTLNAALGVLMPLNFVRVYLNFSVLSVILIFAAAYMLFRKCFSNRF AALGGWSLFVLADIFSSVSYVRFQFSFPMEFGLVAAFGMVYALFSYIREKDRKDLILFAA CIAWTLMAHFYITILCLIICLCFGLLFAVPILKKKLLLCLAAGGLAGVILACAPYAYGLL NGYKFERSIAWALGIVDTTAVSESGDAPADKKKEGVTAEDIRNQKNAAGLVKELLDAETG YLTANYGTDKKTVRGLMALAAYALFGIILSRRAKLKYLGYLFWAVLWQVCAFLSCTYYLN LPTVIEVKRMATFLTFFTIPLLCLPFEAVFCVLRKAGVKERHAEFLLAFIVLGSVAGLIN SGRIKKERYFNITISEGDMRVCLKLCEEHKDNTWTVLSPTNDLSVIRYNGFHYEIVDLLK EIDRGKKRIYIPTPDIYVVTEHHPISFLDDRREIDRSDAASPKNTGEISGVLALQDVDWD VSEDALHGADAPYYFQRNIVMSKLHFWMETIRQIYPNHVSEYYSDEQVTVYKIEQDAYFT LNLSVDYKQLAKESAGEIK >gi|224461045|gb|GG657759.1| GENE 404 400530 - 401447 751 305 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568249|ref|ZP_03777274.1| ## NR: gi|225568249|ref|ZP_03777274.1| hypothetical protein CLOHYLEM_04323 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04323 [Clostridium hylemonae DSM 15053] # 1 305 7 311 311 587 99.0 1e-166 MNNRLFLWIFIVNTCVALIYFLYRGVVRKEYRKAALLAAFMFFTPLAGAVFLAGSEAVNI VLFRRRDGLLNEEELSFSKKRTRMIISDDIEKEVDRVPVEEALIISDTANRRQSFLEVLK RPDAEDYMQRIRGAMAQGDSEVVHYAASYITDAIARYKETEKRLREIYEKSKDADALLIY LRFCSNMLHKHVLSVPEQRIYLVYFDGYLEELYRKDKEKLSGDMLADIIGLWMEIGDGAC AGKWAERAGEYMESDLPAVKAVLKYYFASGDEMRFREALKQIRESPLILDGEALEWVRFY GRTGW >gi|224461045|gb|GG657759.1| GENE 405 401462 - 403585 2057 707 aa, chain - ## HITS:1 COG:CAC0731 KEGG:ns NR:ns ## COG: CAC0731 COG0451 # Protein_GI_number: 15894018 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Clostridium acetobutylicum # 1 703 1 719 725 166 22.0 1e-40 MKVLICGEYGIYCRELITRLKKENHDIFVITGSEKNRREKPRNGVFQEYNFSYRSKNVCT VMKNIKADIMIILGICDTKYTWRDTGQESVRYLTGVTNLLMSAREAGIRQVIYCSSLGVY ENTGGGMIDNETEFEAGSVLMQTVIQTEYMCEEQNRPGEFQISVIRYPEIYGDYKTHDYN VCSRIMERFWGSPAVEIEAERQHRILYVKDAVDVLVRVFMQEEKESCYLIPGTVYTERQI LEAVENVVQGRKTDVRELEYTKGALPAVGKDSNEKLGSYEKYSLEDGLRELFKIYEKEKE LEIREETKKSVVREKLIPLAENIGLFFIVTILYYLFKDTWLGSILDFYLIYVVVIAVVYG CAHSLFAALLTLLARIGEVFLVGETFEYAAFTGLLQILIIGVLVGYMRDKYKRSNGDLED EKKYYESELVDMTRIYDGNRYVKEIYEKRLVNYENSMVRIYEVASRLDFWEPQKVIFQAV DVVSELMEMEDAAVYITGGNSDYMRLAAASSERARELGKSLYAGSDFFMHQELVERTVYR NREIDSKLPAYACGIYEKDKLSAVIMLWTKDLTKVNLYEANTLALICRLIESSMNHATTY WNMLADQYIEGTDVLREEEFNRIEEIYKGGAAENKLEYAMLKVPGKLMAGRNEAVYKKVC SLVRQTDILGEKAGDLYIILANTSRDEAGYVMSRFQNAGIQVDSIVG >gi|224461045|gb|GG657759.1| GENE 406 403582 - 403968 464 128 aa, chain - ## HITS:1 COG:no KEGG:HM1_1178 NR:ns ## KEGG: HM1_1178 # Name: not_defined # Def: hypothetical protein # Organism: H.modesticaldum # Pathway: not_defined # 4 114 5 114 177 64 31.0 1e-09 MSILLKIISIVVCLLMFYGLCLEMKKRNLSENQAVLWLGGVLGLLLLSVFPQILPWAADI LGIWWPPAALIFFLLVVIILIILRHTITISEMETEIKELAMQLTLLKDENKDLKTKIERK TKGEQEKS >gi|224461045|gb|GG657759.1| GENE 407 404158 - 404880 498 240 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 231 2 230 234 95 25.0 1e-19 MQAIICDDCAADRQLLIDYCARYGKENHLLIAAAGMENAGMLLRSRRSRNADVLFLDIYM EGASGIDAARILRGKGFRGAIVFTTTSREHYADGFDTDASHYLLKPVSWPSFCEAMRRVR TRLNVYDRTLHVTSERMALDIAVSGIQYIEVYGHKTILHTSKGDITVSQSLSSLEEALGG IPFLRCYRYFIINMDYVQKIMEDSFLMKDGRRIPMSRDRRAQLRSSYMSYIFQRMEGKRT >gi|224461045|gb|GG657759.1| GENE 408 404877 - 406235 728 452 aa, chain + ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 231 427 215 414 433 66 25.0 8e-11 MIGSISHFFVIFVQTAATACFCFYIFHDMLKACFARLAVYTFFLCCFCGFLSLTVCEICS RLPLDVDSELISLFIMFIIGYFCLRSVVSENSNRILFVLYLSLHVQYLCLSVTYLAYAAW FPALSVNYDYVPADVPGYTLPILLLGPPFAVITRRIYTTLRQADDTVYHRIWFIPLLFLL LYCVQVLFYPVSQKDTQAEANLMRLIISICAFVTYSQMATAVAQSAKATKEKEIHTQLAH QLDLQRSRMEDIETHAEEIRRIRHDHRQHMQVLKGLLENGDTGKALDYLNGYETSTAANI QPVLCENFVVNTLCCRYETLALQSDIAVTRKLKLPQDIAIAGCDLAVIVGNLWENAVAAA LDADKEHRFISLHIQERDNTVFIRMENGYGGIIYQKDGQILSTKPDRNKTPGVGIASIKS VAARYDGMADFVYTPEIFTASVLLYTGVKSAL >gi|224461045|gb|GG657759.1| GENE 409 406346 - 406687 217 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568254|ref|ZP_03777279.1| ## NR: gi|225568254|ref|ZP_03777279.1| hypothetical protein CLOHYLEM_04328 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04328 [Clostridium hylemonae DSM 15053] # 1 113 1 113 113 171 100.0 2e-41 MLQNYEKEQKALTQDVAESQQTLQEANQKVTDLRLLLRTLREMTGITELTPTLVTPLIER IEVHNNDKSSSHCYVKVDIDFTAAGMIDIPTEQEILAMMEEIRENPQDFRFVA >gi|224461045|gb|GG657759.1| GENE 410 406704 - 407561 314 285 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 9 213 22 225 301 203 47.0 3e-52 MKDGKKHTEDESNSISNQKQILLDYCKKQGYKNTMFFVDDGISGTSFDRSDFQRMQRMAE EGKICRIIVKDLSRFGREQVEAGRLTQIVYPSLGITFISIQENVNSTTGEGMEMLPFYNI FNEWYAAQTSKKIRAVWQSKADNGKRVSSTVPFGYMKDPDEKEKWMIDEPAAEIVRKIYD LCLAGRGPSQIARQLEEEQILVLSAYYESIGRTHAQKYQIIPNMQEPIISEEQWLRVQEL REHRRRPTATGRTSLFSGLVYCADCGAKLHFAAAKSMTRNQERTV >gi|224461045|gb|GG657759.1| GENE 411 407680 - 407829 68 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568256|ref|ZP_03777281.1| ## NR: gi|225568256|ref|ZP_03777281.1| hypothetical protein CLOHYLEM_04330 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04330 [Clostridium hylemonae DSM 15053] # 1 49 1 49 49 96 100.0 6e-19 MCLYAPWGNLSIFYKDFRNSNGLISLGHIDSGMEVISNMQGGFSVTLEK >gi|224461045|gb|GG657759.1| GENE 412 407835 - 408251 246 138 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568257|ref|ZP_03777282.1| ## NR: gi|225568257|ref|ZP_03777282.1| hypothetical protein CLOHYLEM_04331 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04331 [Clostridium hylemonae DSM 15053] # 1 138 1 138 138 232 100.0 8e-60 MKKGILLFLSVLLCFGLAACAEQKTTPSVSEQGSAQEQSDMQNSSETSENQSVNSQKPSS SSSNAETSETPETGERKVKLTIDGQEFDVTLYDTPAVNALYDMLPLELIFGDFNGIEKIA YMDNELPTEGEPDEFAPM >gi|224461045|gb|GG657759.1| GENE 413 408278 - 409126 626 282 aa, chain - ## HITS:1 COG:Cgl1021 KEGG:ns NR:ns ## COG: Cgl1021 COG0656 # Protein_GI_number: 19552271 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Corynebacterium glutamicum # 21 282 7 267 267 352 62.0 3e-97 MEFKILRNGIKVPVLGLGTWFIDDDNADSAVISAVKIGYRHIDTAQAYGNERGVGTGIKA CGIPREELFVTSKVAAEAKTYDAAAKSIDKTLDKMGLTYIDLMLIHSPQPWAEWRGGKRY FEENIQVWKALEDAYTAGKIKAIGVSNFLIDDLDNLLAHCEIKPMVNQLLIHIGNTPTEL IDFCKQQNIVVEAYSPIAHGEALKNETIVAMANKYGVSVPQLCIKYVLNLGTVALPKTAN AEHMQNNANLDFKISNEDMETLKALNFKDYGEYSFFPVFSGK >gi|224461045|gb|GG657759.1| GENE 414 409126 - 409815 310 229 aa, chain - ## HITS:1 COG:no KEGG:Mbar_A0780 NR:ns ## KEGG: Mbar_A0780 # Name: not_defined # Def: hypothetical protein # Organism: M.barkeri # Pathway: not_defined # 1 223 1 222 231 162 39.0 1e-38 MKPKAIIKLAVDMLMTLALLFLMGYHLWGEALHEWVGAGMLLLFIAHHILNGHWYKTLFK GKYNALRILTLCTTSLVLVSMLAQMYSGIVMSRYVFVFLPFGGGMSLARRLHILGSYWGF LLMSLHLGLHWNMILGVLRKSARIKSSSKVRSIIAFIIGLAIAGYGVWTFISRAFPTYLF LKSEFIFLNYSEPKILFYIDYLALMGLCIFIAYYSTKLIRKFKKKTEES >gi|224461045|gb|GG657759.1| GENE 415 409812 - 410498 396 228 aa, chain - ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 3 228 22 250 250 244 51.0 1e-64 MELHKTDPEFAERLEHFAFDEVINEENQQLEPFTLYMAILATLIGCGGVDAYKEMIPQAL ENGITPIVAKEIVYQATDYLGYGRMLPFLNVTNEILTENGIDLPLDGQATTTLDDRLEKG IEAQAEIFGEHMKEAWKAGHINRWLAANCFGDYYTRKGLDLSERELITFCFLMAQGGCEP QLIAHAEGNMNMGNDKGFLIRVVSQCLPYIGYPRSLNAVTCINKAVEQ >gi|224461045|gb|GG657759.1| GENE 416 410485 - 410655 169 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568261|ref|ZP_03777286.1| ## NR: gi|225568261|ref|ZP_03777286.1| hypothetical protein CLOHYLEM_04335 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04335 [Clostridium hylemonae DSM 15053] # 1 56 1 56 56 74 100.0 2e-12 MTEKEKMLCGEFYDTRDSELRRLSNNAKDLMRVYNSLSAENMELKKSERRNKNGIT >gi|224461045|gb|GG657759.1| GENE 417 410672 - 411142 260 156 aa, chain - ## HITS:1 COG:YPO2003 KEGG:ns NR:ns ## COG: YPO2003 COG0716 # Protein_GI_number: 16122245 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 13 156 85 231 235 106 37.0 2e-23 MSKKLVTYFSASGVTKTAAERLAKAEGADLFEIKPAVPYTRADLDWTNKKSRSSVEMSAP TSRPQIAERLPNMGDYDTVFIGFPIWWYVAPAIINTFVESYDFSGKTIVPFATSGGSGMG KTVEVLKSLCPTANWEKGKMLNRVSDQELITWVNSL >gi|224461045|gb|GG657759.1| GENE 418 411144 - 411587 306 147 aa, chain - ## HITS:1 COG:MA0416 KEGG:ns NR:ns ## COG: MA0416 COG1917 # Protein_GI_number: 20089309 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanosarcina acetivorans str.C2A # 22 145 21 141 141 122 52.0 3e-28 MKVLDKKQFEKINVFGTGNPNEAFAKYFIGKSFLNPLTNPQETAVFLANVTFEPGCRNNW HIHHAKSGGGQLLICTAGEGWYQEENKPPVSLTAGTVITIPAEVKHWHGAKKDSWFSHIA VEVPGENTSNEWCEPVNDEEYNKLEDK >gi|224461045|gb|GG657759.1| GENE 419 411605 - 413050 628 481 aa, chain - ## HITS:1 COG:all3226_2 KEGG:ns NR:ns ## COG: all3226_2 COG1262 # Protein_GI_number: 17230718 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 51 300 6 241 246 172 39.0 1e-42 MKKFVSLLLSLSLIFSLAACSQSEDSDTGSEQPPESNSLEVTDMQVPENFVLIKGGSFQM GSPDSEAWRSADETQHLVTVSDFYMSKYELTQKEYEEITGNNPSNFKGDDLPLENISWLD AVAYCNARSEKDGLTPVYTIDGQNVSWDRSANGYRLPTEAEWEYACRAGTTTPFYMENSP SAEDANYYSHYPYEIEDNYFSQGNLEVKPGEYRETTVPIDSFPENPYGLYNMHGNVSEWV WDYYGEYGVEEQTDPAGPVSGTLRVYRGGGWNDFAKNMRSAYRATLEQNKGSFNLGIRLV RNATPGTGSVSGIGSQITGGNGDGKILIAYFSWGGNTKGVAEEIKHQTGADLFEITLVNP YSSDYNTVLDEAQRDQNAQARPELTSHIDNMDEYDTVMIGYPNWWASIPMPIASFLEEYD FSGKTILPFCSHGGGRFGQSLTAITKLAPDATMGEALSIHYSGGSELSGDVTEWLNSNGI Q >gi|224461045|gb|GG657759.1| GENE 420 413062 - 413760 370 232 aa, chain - ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 75 230 8 177 179 129 37.0 5e-30 MKKVFSILVVLTLLFSLAACSNSTTNEGSSSPTQQSSDQSSTPAEESNSQNDSSQPVEES NNPSNSSAPTETGSKSLVVYFSWSGNTENVAKSIQSQTDSDIFEIVPATPYSDDYDAVVD LAQEEQRNDARPAISGNIENFEQYDVVYVGFPNWWGDMPMILYTFFDTYDLSGKTVALFC TSGGSGLSGTVNEVKSLEPNATVTEGFHIGSGSSSNPDNAVSEWLNNIGLAK >gi|224461045|gb|GG657759.1| GENE 421 413782 - 414087 365 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568266|ref|ZP_03777291.1| ## NR: gi|225568266|ref|ZP_03777291.1| hypothetical protein CLOHYLEM_04340 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04340 [Clostridium hylemonae DSM 15053] # 1 101 17 117 117 174 99.0 2e-42 MQEYESWGLCGEVKKVMGSWHYDESDIERLSTIMTLHDIGFTNDEVKKYMRLLLKGKSTE KERLKMLGEKRNGTLDEIHFKEKQLDRLDYLRFEIQKSNQK >gi|224461045|gb|GG657759.1| GENE 422 414228 - 414641 137 137 aa, chain - ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 122 159 282 291 84 30.0 5e-17 MPIQEEWGALVREDSSLIGKEFIVPQDLVGIPLILPLGDFAQSNIGKWFGEYATQIDIIA KGNLLYNEAMMAQSNIGAVIGIKLNCNYDGLRFIPLKPALKIDTALAWKKEQMFSATTSA FIDFATQYLKSISDDRI >gi|224461045|gb|GG657759.1| GENE 423 415498 - 415602 109 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKSIFEEMVGTYTQVTDYFIPNLQLPENGIRFI >gi|224461045|gb|GG657759.1| GENE 424 415616 - 415699 150 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MREQNTDAVDELLIKYTNAKKKKFKVI >gi|224461045|gb|GG657759.1| GENE 425 415911 - 416111 95 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568270|ref|ZP_03777295.1| ## NR: gi|225568270|ref|ZP_03777295.1| hypothetical protein CLOHYLEM_04344 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04344 [Clostridium hylemonae DSM 15053] # 1 66 1 66 66 132 100.0 6e-30 MKCPYCNKNMKPGKIWQDRYALKWVPSERRFPFGGGIRLTSIIEDRPFIEAYYCDNCKIL ISKLKE >gi|224461045|gb|GG657759.1| GENE 426 416192 - 417112 1135 306 aa, chain - ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 301 1 301 303 389 59.0 1e-108 MPIRVQNDLPVKEILERENIFVMDEFRATHQDIRPIRIGLLNLMPLKEETELQILRSLSN TPLQVDVIFVNVSSHESKNTPTSHLNKFYQTFGEIKEQKFDGFIITGAPVEQMPFEEVDY WEELKEIMDWTTTHVTSTLHLCWGAQAGLYHHYGIDKVPLEHKRFGVFRHRVMNRKIPLV RGFDDVFYAPHSRHTDVPAEKIHADERLTMLAESEEAGAFLVMAQAGRQIFVMGHPEYDR ITLDGEYKRDVGKGLEIECPVNYYPDDDPENRPLLTWRAHANNLYTNWLNYYVYQVTPYD LDGTPF >gi|224461045|gb|GG657759.1| GENE 427 417115 - 418488 1786 457 aa, chain - ## HITS:1 COG:CAC0730 KEGG:ns NR:ns ## COG: CAC0730 COG0628 # Protein_GI_number: 15894017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Clostridium acetobutylicum # 39 425 2 383 383 139 28.0 9e-33 MDNENKNNQEDGQEKSQEKGKRSDYYAKQPRFGGKGPSKIRQQFNRGMTAFLVVAASILF YFALLRLTNLSEGFTKIFDVLKPVIYGCVFAYLMNPIVKQVDNYLRPVLEKKIKKHDGAR KLSRACGIFLSIIILFVLIITLCNLLIPELYSSIRNLVFTLPGQLNELVDKLNNVKLEDS TTGALIKTAVEEGTDMLQTWLRTDLLTRANDIMSNLTVGVISIISEIINALIGIIISIYI LFSKETFSRQSKKTVYALMKPEHGNMLLHLATKSNEIFGGFIIGKIIDSLIIGVLCFMGL SILNMPYTVLVSVIIGVTNVIPFFGPYIGAIPSAVLILLSDPVKGIYFILFVLLLQQFDG NILGPKILGDSTGLSAFWVIVAILLGGGLFGFVGMIMGVPTFAVIYYIVQMILNNKLERK KLPADSKYYDMLSYVDNQGKYIHSEEYKTEKKESEGK >gi|224461045|gb|GG657759.1| GENE 428 418592 - 420046 1954 484 aa, chain - ## HITS:1 COG:YPO0624 KEGG:ns NR:ns ## COG: YPO0624 COG1757 # Protein_GI_number: 16120950 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Yersinia pestis # 9 481 6 479 483 401 45.0 1e-111 MEENKEKRLEFRGGSFFAVLPLILFVVVCIMLFVVFKVFEMEGLCMGGILVLIVGSLFSK DWSRYWRAVVKGMTSEMMNTLALILLVVGIFAKMMSRGGVAQGFVWLGDSMGLHGGMFVV FAFIATSIISMSTGTSIGTLFSGFPILYPSGILLGAHPLYLAGAILSGAIFGDNVAPISD TTIASAASQSYKNKKGTADIGGVVATRMKYALIAMVIACGLFLVLGNAGAGDPAGKEILE AYKDPKGLIMLIPVAVLLTVAIIKRDIFIAVTWGIISGTVIGLVAGILTPADIVSVEDGA LAGFAIDGIKNMLGTVGYLYAVAGIIGVLNESGMMQKMIDALLKSKLNKSIIGSEFIIGF GIILTSICLGSANGPAIIMYGPIADKIGQESGLHPYRRSNLLDGFASTLSVIIPFTSSFI FIVISCITGLMEEYSFIQAINPIALAGATFHCIALFGVFVFSVLTGWGREYEGPDGERIK AKKA >gi|224461045|gb|GG657759.1| GENE 429 420050 - 420985 915 311 aa, chain - ## HITS:1 COG:CAC1538 KEGG:ns NR:ns ## COG: CAC1538 COG0697 # Protein_GI_number: 15894816 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 3 299 4 299 299 169 40.0 9e-42 MKKTGILPYAAGVVMAVFFGLSFLVTQQGLAEIPPMVLMSFRFALAAVFMTILRAFGVIH ISYKNKPVMGVIALSVFYPGISFFFETISLQYVSSSQAGILVSIMPIFVTLFGIVILKEK PMRIQVFFIILSVTGVLVTVVFARSSGNEGTFFGILLMLVSVLGGSVNNVLSRKYSKYFS SVEITYTMICLGAVIFTCISFIQGIFERDVWRAYLIPFGSAKMMFVVVELSIGTSAVAFF CMNYMLSKLKAVNAAVFINLATVISIAAGVLIVKEHLYWYQIVGGCLIILSVWGTNYFEN RVKNLKEKEGA >gi|224461045|gb|GG657759.1| GENE 430 421012 - 422259 1377 415 aa, chain - ## HITS:1 COG:BH2935 KEGG:ns NR:ns ## COG: BH2935 COG1228 # Protein_GI_number: 15615497 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Bacillus halodurans # 2 401 3 385 394 244 37.0 3e-64 MYIIRNCFLIDGLADEGVDHAMVAVDEGRVCYAGRETAEALEMYRGWEMEDAGGRTVMPG MIDAHVHLCMNGEPDNFRNMIMENAGLAVIHGVKRAQEDLKAGFTTIRCCGEKGEIDMDI RQAVQEGTIAGPRILASGKALTITGGHGDMFSHSAMEADWIAEVCDGEDEVRKCARKRIK RRADNIKLMATGGGMSPGPATVAQLNIAEMAAAVQEAVKNGICTAAHCIGEEGCFNAVEA GVRTIEHGTFLNEETIRRMSEKGTFLMSTLCAFRTIKYGATAGVPEEHLKKVEMFAQHHY VNLHKALEAGVKVGVGTDTGTPFNYHGENAYELECLTDNGMTPMEAIKAATSVNAEALLQ EDIGSLEPGKTADMLLVDGNPLLDITILQDKERIRKVYRDGSAVVDRDKGIMPAF >gi|224461045|gb|GG657759.1| GENE 431 422277 - 423689 1802 470 aa, chain - ## HITS:1 COG:BH2308 KEGG:ns NR:ns ## COG: BH2308 COG1288 # Protein_GI_number: 15614871 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 2 470 9 470 470 289 36.0 8e-78 MKEKVKSIKERKFPHIFAILFLMMVIALIATWIVPSGTYERAVLEDGTSQVVVTDSFQYT DKDYLNPFFLLKAVTQGLTGASLVAFTILIIGACWQVINATGAIAVGINSIAKKLKGKEM LIFPILMFVFALIAAIIGGAELMLVYLPAVMPLMLALGFDSMTATGMVVVSAFSAFSVSV TNPFTVGIGDEITGLPLYSGAWFRIILQVVFYAAGVLYVLHYSRKVRKDPKSSLVYEESA ALAKRYENQTGETEATGRHKLIGLALVIILAVMVYGIISRGWYMEEINGLFIIAAIVAAV IGRLKVEDVCTNMIDGAKGVIAAAIVCGLSRGIMVILDAGSIIDVIIHALSQAVGILPPS LAVIGIFIIQMLFNFLVNSGSGQFLITMPILAPLGALVGINSQTMILASQMGDGFTNLLF PTSGVLMACLAFAKIPYQKWVKFIWKYMLIVTVLGSVSLVIAQMLDYGPF >gi|224461045|gb|GG657759.1| GENE 432 423694 - 424356 788 220 aa, chain - ## HITS:1 COG:PAB0203 KEGG:ns NR:ns ## COG: PAB0203 COG1042 # Protein_GI_number: 14520517 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Pyrococcus abyssi # 2 202 18 220 232 172 48.0 4e-43 MSRFLNELDAKNLLSEYGVPMAKSMVAGTKEEAVRAAEELEFPVVMKILSADIQHKTEAG CVCLGVEKEEVEETYEKILENARSYKADAAVDGVLIQEMAAQGLEVIVGMKKDPQFGPVL MTGSGGIYVEVFQDIALRLLPVDRKEAVRMIKETKLYQIIRGARRTEYDLDALVDSLLKV SELAVDQPSIEEIDINPLFLYEKGKGAKGVDALIKITEEK >gi|224461045|gb|GG657759.1| GENE 433 424349 - 425803 1636 484 aa, chain - ## HITS:1 COG:PH0766 KEGG:ns NR:ns ## COG: PH0766 COG1042 # Protein_GI_number: 14590635 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Pyrococcus horikoshii # 5 464 2 440 457 289 36.0 8e-78 MVHNLDALFDPENIAVVGASNNPLKAGYTVIYNLNQIGYPKEVFPVTMSADEILGRKCYK KLSEIEETVELVVLGTPAKMIYDIMDDLAVRMEKRRDVKVIVCIAADYGETKTEEGIRRQ DCLIQTAEKYGIRVVGPNCIGIIDNINRVDTTFVETLIPKEMRGQKGGISFISQSGAMAA SILMMGASGPAPISMNKFISIGNMADVDCIDLLEYFEQDADTKVIGMYLEGYPDGRKLID TLARIARKKPVVILKVGRSSIGAEAANSHTGSLAGADSVYDAAFRQFGIIRVYTIEDMMD TLQAFDAMKIPAGRNCFLLTQAGGPGIYCTDAFVDEKILKFPLVSEETKRRLADVLPPMA NICSPEGYADITAAATVSHHVESLRAVMDDDAVDSVIFVTVVPTFLPRRELAEALLRLLV EEGYGKKKPVCICIMAGNYVWECRQILEQGGIHTFDTPAHCVKAMSHMTAYGQFLKGQEE EADE >gi|224461045|gb|GG657759.1| GENE 434 425822 - 426727 865 301 aa, chain - ## HITS:1 COG:MTH1738 KEGG:ns NR:ns ## COG: MTH1738 COG1013 # Protein_GI_number: 15679730 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Methanothermobacter thermautotrophicus # 10 289 5 280 288 242 44.0 6e-64 MNIVDKLASKEDMVSPGISACVGCNVELTLRTCMKVLGPNTIYAVPPGCMGGVGVVGWDT ESGSKIPVFFPLLDNVASMLAGIKMHYEKQGREVNVVAFAGDGASTDAGMQCLSGAAERG DKLIYICYDNEGYMNTGYQRSSATTKYSWTTTTPVSTEGRGGKKQHKKDFPMVMAMHDIP YMATCSPAYIPDMVRKLEKAMEASKTGLAYLHVYNPCLTGWGIRPDTSIEVSRLAVESNF FPLYEVENGAFTINKTFKEPKPVKEYLSRMKKFKHLNEEEAAEIQELVDRKWNRLTKLAS L >gi|224461045|gb|GG657759.1| GENE 435 426733 - 427920 1509 395 aa, chain - ## HITS:1 COG:MA0032 KEGG:ns NR:ns ## COG: MA0032 COG0674 # Protein_GI_number: 20088931 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Methanosarcina acetivorans str.C2A # 3 392 10 400 403 342 46.0 6e-94 MQRLDVLNGNMAAAVGAALAKPDVIAAYPITPQTPVVEYLTQFAADGKIDAAMSEVESEL SAMSVVTGASLAGSRTFTATASQGLSLMYEPYFRASTLRLPIVMAIVNREMISPQSVWGG QQDSMSVRDAGWLQIYAEDNQEILDLVVQAFKIAEDKRVLLPINICYDGFYLSHMTERVM VPEQEKVDAFLGTYRPEHIILDPERPMAVDPLTNGALLMEYRYKHLKAQQAALEVIDEVD KEFGELFGRSYGGAVEEYRMEDAEYAIITTGSMSGAAKDMVDAKREEGVKAGLIRMRMIR PFPKERIRKALSGVKAFGVVDKNVSFGCDTGIVYQEVKAAMYGGNTVPSVPVIGGLGGED ISLQMMGDVIDAVVCTAKEQKDSETVWLMVEEGQV >gi|224461045|gb|GG657759.1| GENE 436 427921 - 428187 312 88 aa, chain - ## HITS:1 COG:MK0081 KEGG:ns NR:ns ## COG: MK0081 COG1144 # Protein_GI_number: 20093521 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit # Organism: Methanopyrus kandleri AV19 # 21 87 23 89 89 85 61.0 3e-17 MEFKSKYIVPVGADGIHVLNTGDWRTQRPVLDQETCIACGTCLLYCPVNSIRKTDGTFTI CYDYCKGCGICAHECPKNAITMIPEEGK >gi|224461045|gb|GG657759.1| GENE 437 428205 - 428747 661 180 aa, chain - ## HITS:1 COG:MTH1740_1 KEGG:ns NR:ns ## COG: MTH1740_1 COG1014 # Protein_GI_number: 15679732 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Methanothermobacter thermautotrophicus # 1 172 1 171 174 166 51.0 2e-41 MKEIRIHGRGGMGAVKAAEALVYAAVMDGKYGNSIPFFGFERQGAPVTAFVRISEEPIRP KNRVYHPDIIIVLDPTIMNAVNVFEGVKEGGILVLNTTHDPKDMDIPGNIASVTVVDATK IALDMIGRPITNTVMLGAFCQATGLVSVDEVAKKVEELWGTKNKEALYKGYESAVTADMR >gi|224461045|gb|GG657759.1| GENE 438 428761 - 430305 1112 514 aa, chain - ## HITS:1 COG:BMEI1644 KEGG:ns NR:ns ## COG: BMEI1644 COG0044 # Protein_GI_number: 17987927 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Brucella melitensis # 63 514 2 456 489 162 26.0 1e-39 MGNDIFADYIRNLKQNNSSASPALSYAVDREPVKTDGGGETLHVLREISQKLSDMQAFQA PPAGGSADLAVKGGMVVLPGNGIFKADVFIKDGRILSLGQGEGIRAAKTVDASGKYVCPG LIDPHVHLGLFAPMETDMASETKAAVMGGITTTGVFFGGAASHFSTFPEIEEQAGRCSYT DIIPHLVIGNEEQMRELPDYARYFGVTSFKVYMNGIPGMIPSVDDGFILDVMEQMKRTGR QCILCCHTENTHIVSRALRDAKEKYGEAADVKDWMESHPAMAEEEAAVRISYLAEKSRVP VYLVHIGTREGIEKLRQIKPFNKYVHIETTSPYLSVTSEQFDGPLYKMEPPLRNAEDKNA LWEALDDGVIDTIGTDNVCENRKEKQPDRSIWDVVPGYSVVETHLASVLTEGAVNRGISI ETLITHMTRRPAETFGVYPQKGTLLPGSDADLVVIDMNETREVHARDLHSRSDFSIFEGR RLTGWPVMTVKGGSIVMENGMLVADAPSGHMVKR >gi|224461045|gb|GG657759.1| GENE 439 430309 - 430947 658 212 aa, chain - ## HITS:1 COG:no KEGG:Psed_2086 NR:ns ## KEGG: Psed_2086 # Name: not_defined # Def: microcompartments protein # Organism: P.dioxanivorans # Pathway: not_defined # 11 211 10 209 213 221 56.0 1e-56 MEDVKKENLNLRTFIIVDNMQPQYAAVTGTVSKGDIPLAGMSELYIELAPGSGVYDLLNA ALKSSNAKPAFQIVEREYGEIELHSYSPEDVKQAGEAVLDACSLTVLDRMKPKIVSEQII SNTDAYQAQLINRDSRHGSILVPGETLFIMEVEPAAYISIAVNEAEKNADIKVVTFDPVG RFGRMYISGTESEVRSARDAAIAAITGVEGRT >gi|224461045|gb|GG657759.1| GENE 440 430960 - 431223 477 87 aa, chain - ## HITS:1 COG:FN0083 KEGG:ns NR:ns ## COG: FN0083 COG4577 # Protein_GI_number: 19703435 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Fusobacterium nucleatum # 1 86 4 89 94 85 69.0 2e-17 MKSKGFIETRGLVAAIEAADAMVKAANVTLAGRKMIGGGLVTVIIEGDVGAVKAAVDAGA AAAQKVGELVSVHVIARPDAEIDSFLQ >gi|224461045|gb|GG657759.1| GENE 441 431244 - 431507 421 87 aa, chain - ## HITS:1 COG:all0866 KEGG:ns NR:ns ## COG: all0866 COG4576 # Protein_GI_number: 17228361 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Nostoc sp. PCC 7120 # 1 83 1 85 101 60 42.0 5e-10 MYICKVQGKCVSTIKDEHLKGCSLITMQRLNKTKGPVGEMLVAVDTIGCSVGETVLVTRG SGARAVLGAESPADMVVVGIVDTYDCN >gi|224461045|gb|GG657759.1| GENE 442 431517 - 432968 1647 483 aa, chain - ## HITS:1 COG:BS_ycbU KEGG:ns NR:ns ## COG: BS_ycbU COG0520 # Protein_GI_number: 16077335 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Bacillus subtilis # 106 476 6 363 370 265 40.0 2e-70 MKKFYTAADVNFSASKGEQVIYINPGDVVTSIAREEAEKKGIRFAAGEAAAAPAGIPQPA AVRPAPAPAAAPVYQPAPAAAPAASYSYPQVKALPYKGLLSEAEIDRWREDFPILRSVAH LGNCSQSAQSKQVLAGIQRYLDNWGSVGMDWDSWMEEIDLAKAEFAKLIGAEPDEIAIAS SVSDLVSSVANSLDYTGRRKKVVVTDMEFPTVDYIWLANQRHGAKVDFVSVNENHEIDIN EYERYIDEDTLLTSITQVYYLNGFKQDIKAIADIAHRKGSLILVDAYQCLGTEPLNVKEM NIDILVSGCLKYLFGIPGVAFMYVNKNLIQELKPSVTGWFGQTNPFLFQTRYLDWANKTS RFDTGTPPVLTAYAARAGLEIINEVTVPKIKDRIDMLSAHALNGVAARGLKTISPFDVSK KGGTTAIVCCDKVDSHTMEKLLRDRNVIGSGRGDVIRIAPHFYTKPEEIDYALDCIKDIL EGR >gi|224461045|gb|GG657759.1| GENE 443 433009 - 433287 458 92 aa, chain - ## HITS:1 COG:FN0083 KEGG:ns NR:ns ## COG: FN0083 COG4577 # Protein_GI_number: 19703435 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Fusobacterium nucleatum # 1 79 4 82 94 83 68.0 1e-16 MNSYGFIETKGFVGSVEAADAMVKAANVEVAGKMEIGGGYITIAIKGDVGAVKAAVDAGA EAAQRVGELVSAHVIPRPNEGLLDLFLEKEEA >gi|224461045|gb|GG657759.1| GENE 444 433290 - 433751 460 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568289|ref|ZP_03777314.1| ## NR: gi|225568289|ref|ZP_03777314.1| hypothetical protein CLOHYLEM_04363 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04363 [Clostridium hylemonae DSM 15053] # 1 153 1 153 153 300 100.0 2e-80 MAEIDRHSFICGMIAAFGECVAQEVKKIAFSPPFPPSDLKHLEAEAERIMREQGLSFCLE KNPDIPEDKRVYWWVLYKFPEVQSAYARLREKGYNPAWEFEEFKDLLSYGMAWGDGYEQV VPRIRKETSPMDPVTRILFPDDGWPIEKMYKEV >gi|224461045|gb|GG657759.1| GENE 445 433954 - 434670 724 238 aa, chain + ## HITS:1 COG:slr0449 KEGG:ns NR:ns ## COG: slr0449 COG0664 # Protein_GI_number: 16332256 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Synechocystis # 10 227 3 227 238 92 25.0 8e-19 MPKNNSSDLIAPYMSPWLSMDDEDWESILKDSTVKTYARDAVIYRQGDETPYVYLVKEGR VVLDLYGINGRRRSIYIADKGTCFGELACLDRLANYCTATTCTKTTLYLIPKKRFIEEIY KNPDFSMTLLKALSLKTRLITSLLEQMSFNDSSYRVYHSLLSLIQLYGVQTKEGSYKLNI KFTHQEMAYQTGLSRVSVSNIFLSLTNKGLIEKENGYLIVKDIKALKEYLIKEDWELE >gi|224461045|gb|GG657759.1| GENE 446 434793 - 435524 460 243 aa, chain - ## HITS:1 COG:alr4392 KEGG:ns NR:ns ## COG: alr4392 COG0664 # Protein_GI_number: 17231884 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Nostoc sp. PCC 7120 # 37 212 27 203 223 67 27.0 2e-11 MADFDVLLPEYESPWLFFSKKMPSLLEDIQSKMELCTCRKNTILFTQGEDNPDVYIVRTG VVRILTGDENGSEKHLMIAGPGSLLGNLSSLDGYPSLFTASTAEECCSLYRTTGQIFSRM TAEIPGFKDFLIQDLCAKMRILAGNISSLSFQTADTRIVRAFLYLIRESGSPCSRGIKIN IPFTHQEMADLVYSNRVTVSRFFSRLKKEGVIEKVNRYYYILDVDYFYNYMNRLSGPHDE SIV >gi|224461045|gb|GG657759.1| GENE 447 435730 - 436470 868 246 aa, chain + ## HITS:1 COG:AGl353 KEGG:ns NR:ns ## COG: AGl353 COG4126 # Protein_GI_number: 15890289 # Func_class: E Amino acid transport and metabolism # Function: Hydantoin racemase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 232 4 224 243 62 26.0 6e-10 MKLKLILPVADTPATRKANEGIPLALRTLNPETEVSVSFLKKGFEALNTITRIGYNSPGI AEAAVTAEKEGADGIFINCFADPAVDMARELVHVPVFGGFRSAMMAALGCGKRFAVMIPG KEDPAGTFLLNKVIENNPEFKDSIVRRDFTDLDVLELHDKEKLLERLAGFAEESACRYDC DCLILGCTAMSYIIDDLRAGLCRRGCRITVLEPLSTGLKMLESFVTLGLNNSTAHLVNNE MDQLIK >gi|224461045|gb|GG657759.1| GENE 448 436505 - 437842 1678 445 aa, chain + ## HITS:1 COG:BH1882 KEGG:ns NR:ns ## COG: BH1882 COG1457 # Protein_GI_number: 15614445 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus halodurans # 18 439 11 430 445 320 43.0 4e-87 MASFWKFLEEKAYAGGDDDFARKPVPEDKKRGWASSAVVYIGCAISISAFTLGGSLATGL TLNESIIAVLVGALILAAMACLCAEPAMYTGLSTSMIGKFTFGLRGAALVGLLYAGCAWG WFGVQAGLFGDTIGQMFRLMTGSALSPFTVKVIIVIGGLLMTTSAIFGFKSIEKLSWVAI PAIAILMVSSLVMVLKGHTYADLNTSFITNPMSLGTGISLVIGSFAAGAVGSPDILRYAK NFKDTVKAMVIGLVIGYGITIVIAAACAKAVGDANIVTVMIGLGWGVLAMVVLVLAQWTS NDNNVYSGSLGLSVVFEKMPKYKLAIFTGVSGTIFAVIGLSNMMIPFFSVLGIFTPPLGG CYLADFYLCRKFYSFDRLNKLKKVRIESMAAYLIAAAIGFMTTQTSPGFALFEITTIPAI DSFVAAFIMQIVCVKLFNKNHGKDC >gi|224461045|gb|GG657759.1| GENE 449 437870 - 438964 1259 364 aa, chain + ## HITS:1 COG:mll9130 KEGG:ns NR:ns ## COG: mll9130 COG3535 # Protein_GI_number: 13488077 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 45 356 47 356 361 152 30.0 1e-36 MSVKMNREQLYDMTSGAIILGSGGGGDVKTSYRLLEDILALTEEVEFAGLDEVPDDANVA IISGMGSPAATKERGFDCIACVHALKRLEAVTGRKIDYVAAFEVGGGNFMPPVYTACYTG IKVINADGVGRAVPESFMIMPEIHKIRSAPFAMANEENLSAVLYYEDSSDCELIGRPIVN VFGGSAGVANYIMDGAAAKKALVAGSYELARSIGEAVRLGIAAGGRPVECIARATGGIEI IEGKLTELNMKTENSHDWGYEIIEGTGSYTGKSIKIMIENENILAFDQDGGVRCVTPDAL CVFRSDGTPLTNADLEPGMDVAFVGVPCNPKWLEGDAVSVFQKAFDHFGYKGGYIPVTEL NAHS >gi|224461045|gb|GG657759.1| GENE 450 438977 - 440389 1073 470 aa, chain + ## HITS:1 COG:CAC2723 KEGG:ns NR:ns ## COG: CAC2723 COG0624 # Protein_GI_number: 15895980 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Clostridium acetobutylicum # 5 463 1 464 465 322 38.0 1e-87 MEYVLDKLIEKYREDIVRCTRNLVRIPSVKDTPLPQMPFGRPIGECLDETLALCRSLGMR TKNCGGYAGWAETGSGEELCGVLVHLDVVPAGDGWTHPPFGGLMEDGKIYGRGTVDDKGP AAASIFALKAIMESSLTLSSRIRIIFGTDEENDWACMDHYKEQEEIPSAGFSPDAEFPVI YAEKGILFATLAKEGTLPEGIPYIRSLSGGRRANMVPDECRAEIALPEPDAAFVRQLKAA ADSAGEAEVTVSGSLITVRTAGKTAHGSTPENGVNAISVMMNVLAPVMTENSFQKDFLDF YMSHIGSETDGRSMFGSLSDEPSGKLVLNAGVLTMDTHSAALKLNIRYPVTYTGTHIWQR LTKAAADAGLRAVIDLNSEPLYADADSHIVQTLLSVYHSYCPDGSVPIAVGGGTYARSMP NSVAFGPVFPGKAELAHCPDEYISVEDLILSAKIYAGAMYRLAGRKEDVL >gi|224461045|gb|GG657759.1| GENE 451 440386 - 441534 928 382 aa, chain + ## HITS:1 COG:BH0352 KEGG:ns NR:ns ## COG: BH0352 COG0624 # Protein_GI_number: 15612915 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 14 381 6 373 374 256 39.0 4e-68 MIQDSITKYIDSSRSDMILLLEKLVNTDSGSYTTAGVEKVAGFISEILIPLKFDVQMLPG GKYAPHLLACRKGNGTKKIMFLGHMDTVFDEGTARKRPFCIKGDRAYGPGVCDMQAGIVC LLYALKALEEAGFTDYGELKILFNSDEERGSETSEKYIIEECKKSDMVLVMEPGMPDDHV VIERQGGGIFNLDIEGKPAHAGACPLDGIHAIDEAAHKILAFHGLTDLSLGRSVSVGVIN GGTRSNIIPEHVFMEIDLRARSHQDGLELMEKMQKIADTSYVPGTKSTLKKVMYRPPIEK TPGNAALYRTLTAAARKLGITVSETYCGGGSDGNYTSAERIPTIDSLGPVGSLEHTDGEY MLIETLFSRCKLTALFIAELSA >gi|224461045|gb|GG657759.1| GENE 452 441615 - 441935 316 106 aa, chain - ## HITS:1 COG:no KEGG:CPE2333 NR:ns ## KEGG: CPE2333 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 1 103 1 103 105 64 41.0 2e-09 MPELKCTVQTCTHNKNFYCDLEKIQVGGNTAKRAEETCCDSFEERKGDSYSNVSQNNASA CSCIDCKATDCMYNEECKCHAGKISVEGSNACKCDQTECATFKCGC >gi|224461045|gb|GG657759.1| GENE 453 442006 - 442443 559 145 aa, chain - ## HITS:1 COG:BH2288 KEGG:ns NR:ns ## COG: BH2288 COG0824 # Protein_GI_number: 15614851 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Bacillus halodurans # 11 136 13 138 143 106 38.0 2e-23 MNTAEPYRHKVQYYETDQMGIVHHSNYIRWFEEARTDLMAQMGMGYEEMEKRGIMSPVLS VEADYLRMVHFGDTVAINAYIKEYNGIKMTIVYEVVDEKTEMVHCRGLTRHCFINESGKP VSLKQCCLEFHDVFAKGLCDHKNKQ >gi|224461045|gb|GG657759.1| GENE 454 442460 - 445429 3321 989 aa, chain - ## HITS:1 COG:AGl1027 KEGG:ns NR:ns ## COG: AGl1027 COG5001 # Protein_GI_number: 15890630 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 556 959 224 628 648 143 30.0 1e-33 MNIKRISIRKKLLAVMLLVVMLQGILCFSALTFNGGFEYLKKSVCTSFSNTTLARKNAIE NLMFNKWSNLEEYQEKVQASVSAKLAEEGKDLSDLALDKELNNGLLLDVTEDMIDMLRYN STTEVYIVLGGYGDRDAQEHCGLLIRNLDQGTNANSKGFLLETGSSEISKKYGIPMDSYW SSRFVFRDMADRTWYDKPAAAGEKYTDKSGSELGYWSGFFRWSPEDIKVMSYSVPLVKDG TVYGVMGITVSEDYLESMLSPQELDAGNTGSFVLARTTDGKSYESIFSTGIVAKELAADD NKITFKNEPANGKVYQLEDAEGNYGNVQNIDMYRRTSPFSREKWAVIGVLPDSTLFRSTD RLHMTVMVAFAASILLGVAGAVVGSYFFTRPIEQMVDEIRSKDVNEELKFKSSNVREIVA LENAIASLNANVRQNASKVSQIIELVNLPLGVVEYQRDAEKVFCTKKVIKMFMMDKKYYS RGYLDRKYFEDYLSEAGLDVLLERSGEKDYQIAHTIQQRWVHLKSLADEDKTLITVLDIT KDIYERQKIEYERDYDILTHLLNRRAFNRRMKQVLQEGSRLTLGAMIMWDLDNLKYVNDT YGHDYGDQYIQRAAIVFGGLARDGGIVGRISGDEFLAFVPECGSRERLLEKVEEIKRQLN NTRVVMPDGESIAVRASGGIAWYPDDGRSLDELRKYADFAMYDTKNSYKGEFKEFDKKAY EKDAFLLQGREQLNKLIEDEMVNYAFQPIVSTIDGSIFAYEALMRPMMENLSSPADVMRL AIAQSRLPDIEKLTFRRALEDYASQRDAFGDRKLFINSIPNQILSEELMYGLFERYQIGA GMLVVEMIESEQTDIGIMEDKIQMLKEFQAELAVDDFGAGYSSESTLLYMQPDYVKIDMS IVRDIHKDKDRQALAVSTLNYARPRGIKVIAEGVETAAEMETLISLGIDYLQGFYVARPD VTVRGIDGKVVKEIREMRKKAEDGGSHRL >gi|224461045|gb|GG657759.1| GENE 455 445442 - 446869 1578 475 aa, chain - ## HITS:1 COG:AGpA77 KEGG:ns NR:ns ## COG: AGpA77 COG1653 # Protein_GI_number: 16119286 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 370 5 346 419 60 24.0 5e-09 MKRRIACACIIALATGLAAGCAGKTGGGTDSDNPTVIEIETYYNGAAKIALDELVEEFNN TVGDEKGIFVKASSSGDMSELFQNLNDELEKDAKDRDLPDIFSCYGSNALEFEEEGLLAD LDDYFTKDELSEYVDEYIEEGRVGKDNALVVFPIAKSTEVMTINKTDWDKFAVDTGADLR QLSTWEGLTDTAEAYFEWSGGKALFGRDAFANYMLAGAHQLGEDMFDIKDTDVSISMDKD MMKKLWDNYYVPYVKGYFTSIGRYRSDDMKTGDLIVAIGSSSGGSYYAQEVTVGDDDPYP IETMVMPVPNFEGTDPVVTQQGAGMAVVKTDKEKEAAAAEFLKWFTDVDANSRFSMASSY LPVKKSSNDMESLEKIVEKNKIEWNDIVRDTIEVGFEECNTYELYTMTPFKGSDNCRHIV EDSLQNKAAADRETAKGLMETGKTLEEAVSGLVTEENFETWYNELSTQLREAVQS >gi|224461045|gb|GG657759.1| GENE 456 447015 - 447743 581 242 aa, chain - ## HITS:1 COG:CAC0441 KEGG:ns NR:ns ## COG: CAC0441 COG1434 # Protein_GI_number: 15893732 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 11 234 17 249 259 124 34.0 2e-28 MLWKIALPAAGAVCLSYYGAVSIRLRRWNSTFARFWLAAGLACGALWELFQLRPELAGSP LWKLLWIPAAVFAAVEIRIAAGMVSTEEKDIPYLIVLGAQVKGTKITDSLRRRLKRSAAY LSENPGTKVIVSGGQGPGEDIAEAEAMADFLADCGIKRSRILLEDRSKSTEENLRFSAAY LPDMTVKVGIVSNNFHMYRACCYAGRTGYKNVCRIPSDCSPLLFANYMVREFFAVCRLWL PC >gi|224461045|gb|GG657759.1| GENE 457 447728 - 448234 538 168 aa, chain - ## HITS:1 COG:CAC3537 KEGG:ns NR:ns ## COG: CAC3537 COG0653 # Protein_GI_number: 15896773 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Clostridium acetobutylicum # 4 168 2 165 166 137 43.0 1e-32 MSRTLLEQWRDTAYNEQADRGELQKFWAAYFQIEKEIYEQLLEQPDVEVKGTVKELAEKY GQEVFTMAGFLDGINDSLKEPNPIDTMEEDTVVSLAFDKEKLYKNMVAAKADWLYELPQW KDIYTEDELKALYKEQKQSGTVRKEKEPGRNDPCPCGSGKKYKKCCGR >gi|224461045|gb|GG657759.1| GENE 458 448325 - 448546 313 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568303|ref|ZP_03777328.1| ## NR: gi|225568303|ref|ZP_03777328.1| hypothetical protein CLOHYLEM_04377 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04377 [Clostridium hylemonae DSM 15053] # 1 73 4 76 76 112 100.0 6e-24 MKKLKRITALAGAVLLAGMYMSTLIFALLDRSETMGLLKASVVCTVLLPVLLYAYTLVYK ITKGDGGGEDGPS >gi|224461045|gb|GG657759.1| GENE 459 448549 - 448704 180 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQQRNESNYPEVISMEEYLTKRQKIREKEQKGRKKGAEKERSAWMLAQLYV >gi|224461045|gb|GG657759.1| GENE 460 448930 - 450225 1550 431 aa, chain - ## HITS:1 COG:MT0373 KEGG:ns NR:ns ## COG: MT0373 COG0104 # Protein_GI_number: 15839743 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 5 422 6 422 432 365 44.0 1e-100 MVKAVVGANWGDEGKGKITDMLAEEADIIVRFQGGANAGHTIINNYGKFALHTLPSGVFY DHTTSVIGNGVALDIPVLFSEIQSVIEKGVPAPKILVSDRAQIVMSYHKNFDAYEEERLG GKSFGSTKSGIAPFYSDKYAKVGFQVSELFDDKLLKEKTVRIAELKNVLLKHLYHKPEID PDELYDELQEYKKMVEPYVCDVSLFLHNAVKEGKEILLEGQLGSLKDPDHGIYPMVTSSS TLAAYGAIGAGIPPYEIKKVITVCKAYSSAVGAGAFVSEIFGEEADELRRRGGDGGEFGA TTGRPRRMGWFDCVASKYGCRMQGTTDVAFTVLDVLGYLKEIPVCVGYEIDGKVTTDFPT THLLEKAKPVLETLPGWNCDIRGIKEYDKLPENCRRYIEFIEGQIGYPITMVSNGPGRED IIYTNRAADVL >gi|224461045|gb|GG657759.1| GENE 461 450322 - 451881 1681 519 aa, chain - ## HITS:1 COG:SPy1212 KEGG:ns NR:ns ## COG: SPy1212 COG1502 # Protein_GI_number: 15675176 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 9 519 16 525 525 461 45.0 1e-129 MHNEARGTAKKGLFRIIFSRTGIILLLLLLQIGIFIGTTIYLTEYMAYIYGAFTILGIIV LIYIINSEGNPAFKMTWMLCVLALPVIGTLFYLFAKTQFGTRYMKHRLAHLKLETDPYME QDQNIVDAIWASRSANAQLAYYLSNQLGFPTYRNTEVEYFPLGEDKFRAMTGELKKARKF IFLEYFIVEEGRMWNTILDILKEKVREGVEVRFMYDGMCAISMLPYNYPEQIRRYGIKCK MVSPVKPFLSTVQNNRDHRKICVIDGKVGFTGGVNLADEYINEKVRFGHWKDTAVMLKGD AVQSLTMMFLQMWNVDERRAEGYGKYLTEKTPGLRRELGYIIPYGDSPFDDENVGEEVYF HILNHAKKYVHIMTPYLILDNEMITTLTRAAKSGIEVAVIMPHIPDKWYAFAVAKTYYKE LIEGGVQIFEYTPGFVHAKIFVSDDDTATVGTINLDYRSLYLHFECGVFIYNNSEVDKIE RDFQRTLAKCHKVTLMEVKKRTMLTKIMGQVLRLFAPLM >gi|224461045|gb|GG657759.1| GENE 462 452065 - 452325 444 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568308|ref|ZP_03777333.1| ## NR: gi|225568308|ref|ZP_03777333.1| hypothetical protein CLOHYLEM_04382 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04382 [Clostridium hylemonae DSM 15053] # 1 86 3 88 88 118 100.0 1e-25 MSKWGKRLLGLAAIGSAVAGLVYYFKKKNMCDEEDEFEDDFEDEDFDLDNDLKSAADREY VPLNPSGKAEEDTGADAASDPAPEDK >gi|224461045|gb|GG657759.1| GENE 463 452385 - 452822 404 145 aa, chain - ## HITS:1 COG:BS_yhdI KEGG:ns NR:ns ## COG: BS_yhdI COG1167 # Protein_GI_number: 16078013 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 1 144 320 462 469 91 34.0 4e-19 MVLPEPLLDAYNKKSRFVNSTVSKVDQLIVQKFIEEGYYERHLNKTRALYKSRHDVLIEE LRPLLDICSISGEHAGVHLLLTFRNGLMERELIERAAKRDIRVYGLSDYMIQGTKETSRT VLLGYANLTEEQIKEAVRILADCWR >gi|224461045|gb|GG657759.1| GENE 464 452933 - 453814 732 293 aa, chain - ## HITS:1 COG:BS_ydeL KEGG:ns NR:ns ## COG: BS_ydeL COG1167 # Protein_GI_number: 16077591 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 15 292 14 291 463 244 44.0 1e-64 MNELTINLKTNSATPLYEQIYDYIKNDIQSGRIPYGEKLPSTRSLSGYLEVSRSTVELAY EQLLSEGYIESRPCRGFFVSEIEELYYLKRAEPQTGRRRAEQRSYRYDFTPNGVDLKSFP YNVWRKLSREILTDDRTELFRSGDSQGEYSFRSAICSYLYQARGVNCTPEQVIVGAGNDY ILMLLSTVLGPGLKVAFEDPAYMQAYRLFKSLSYETVSVGMDRSGMCISQLAGAEADVAY VTPSHQYPTGTVMPIGRRLELLKWAQEREDRYIIEDDYDSEFRYKGKPIPALN >gi|224461045|gb|GG657759.1| GENE 465 453821 - 455488 1800 555 aa, chain - ## HITS:1 COG:HI1354 KEGG:ns NR:ns ## COG: HI1354 COG0008 # Protein_GI_number: 16273264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Haemophilus influenzae # 2 551 11 557 557 620 57.0 1e-177 MGEETISRNFIEQEIDRDLAEGVYTEVCTRFPPEPNGYLHIGHAKSILLNYGLSQKYDGT FHLRFDDTNPTKEDTEYVESIKEDVKWLGANWKEHLYFASDYFDVMYECALKLIKKGKAY VCDLSAEEIREYRGTLTEPGKNSPYRGRTVEENLALFEAMKNGEYKDGEKVLRAKIDMAS PNINMRDPVIYRVARMSHHNTGDKWCIYPMYDFAHPIEDAVEKITHSICTLEFEDHRPLY DWVVKECEFDPAPRQIEFAKLYLTNVVTGKRYIKKLVQDGVVDGWDDPRLVSIAALRRRG FTPESIRMFVEMCGVSKSQSSVDYAMLEHCIREDLKLKRPRMMAVLHPIKLVIDNYPEGE VEYLEVDNNMENPELGTRKVPFCRELYIERDDFMIEPPKKYFRLFPGNEVRLMHAYFVTC QSFETDEDGNVTVVHCTYDPETKCGTGFTGRKVKGTIHWVAAPYAKPAQVRLYENLVDEE KGVYNKEDGSLNLNPNSLEVLENCYVEDSFDSAEGCDSFQFVRNGYFCIDSKDSAPGQLV FNRIVSLKSSFRLPK >gi|224461045|gb|GG657759.1| GENE 466 455597 - 456964 1475 455 aa, chain - ## HITS:1 COG:FN0667 KEGG:ns NR:ns ## COG: FN0667 COG0534 # Protein_GI_number: 19704002 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 404 6 409 426 276 39.0 7e-74 MKKSTVMTEGVIWKEILFFSIPLILGNLFQQLYNTVDSIIVGNYIGSEALAAVGSSSSII NLLIGFCIGASAGAGVVISQFYGAGDKNGLKKAVHTTVAISIAAGVILTVAGIALAPVIL RAMGTPAEVFREAVVYLQVYFGGIVFSVIYNMSAGILNAVGNSRRSLVYLMIAAFSNIVL DILFVIVLKMGIVGAALATDISQLLSCVFIILYLVKSKEVYHVNIKEIRFYDNLLSKIIR IGLPTGIQNIVISFSNVIVQSSVNSFGAVAMAGFAAYIKIDGFNILPVLSFGMAAATFTG QNVGAGKYDRVKKGMYVSVGMGVVYTILTGILLLTFAPQVIGVFTKNPDVVGYGVYIMRY FCPFYWLLGILQVLSGTIRGAGKTLETMLVFLFSLCILRVAWIWGALAIEHKLDWVMTAY PVSWLVGAVLILLYAWKGNWMPGRRKKDAAMPLSS >gi|224461045|gb|GG657759.1| GENE 467 457160 - 457771 862 203 aa, chain - ## HITS:1 COG:BH0115 KEGG:ns NR:ns ## COG: BH0115 COG1595 # Protein_GI_number: 15612678 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 3 201 13 214 217 158 41.0 6e-39 MSDYETMTDEQLIRNLRAGDKAIVDYIMDKYKNLVRKEANAMYLLGGENDDLIQEGMIGL FKAVEDYDVEQQASFFSFARLCITRQMYSAIEASRRKKHSPLNSYISLYDQEDEKGSLLE TMEAGGESNPEELFLSKEYVSLLESELEEQLSDLESRVLYLHLMGTDYRTIAKLIDKSPK TVDNALQRIKSKTEKILAKEGRK >gi|224461045|gb|GG657759.1| GENE 468 457784 - 458536 1136 250 aa, chain - ## HITS:1 COG:BH0113 KEGG:ns NR:ns ## COG: BH0113 COG0566 # Protein_GI_number: 15612676 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Bacillus halodurans # 11 247 6 243 249 254 52.0 1e-67 MSEMKESELMIEGRNAVLEAFRSGRPIDKLFVLDGCQDGPVRTIVREAKKHDTVLNFVTK ERLSQMSETGRHQGVIAYGAAYEYAGVDDMLALAEERGEDPFIFLLDNIEDPHNLGAIIR TANLAGAHGVIIPKRRASGLTATVARTSAGALNYTPVAKVTNLVKTMEELKEKGLWFVCA DMDGESMYRLNLTGPIGLVIGNEGEGVGRLVKETCDFAAGIPMKGNIDSLNASVAAGVLA YEIVRQRIQK >gi|224461045|gb|GG657759.1| GENE 469 458533 - 458982 267 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 25 149 11 137 141 107 41 3e-21 MEKGIEWQFDSYMREIFQMKEVDMKEYSPLTLAYIGDSIYDLMIKSLVVNEGNRQVNKLH KETSAFVQASAQSQMMRTLQGQLTEEEHAVYRRGRNAKSVSPAKNQSLTDYRRATGFEAL MGYLYLRRDYKRMLDLVKLGLDSIKGENE >gi|224461045|gb|GG657759.1| GENE 470 458967 - 460373 1569 468 aa, chain - ## HITS:1 COG:BS_cysS KEGG:ns NR:ns ## COG: BS_cysS COG0215 # Protein_GI_number: 16077162 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Bacillus subtilis # 1 468 3 465 466 508 54.0 1e-144 MKLFNTLTRKKEEFVPVEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGFDV NYVSNFTDVDDKIIKKAIEEGVSADEISKRYIKECKKDMEGMNVKPATKHPLATEEICGM VEMIGSLIEKGYAYEKNGTVYFRTRSFKDYGKLSHKNLDDLRTGERSLLVTGEDEKEDPL DFVLWKPKKEGEPAWDSPWSDGRPGWHIECSVMSRKYLGEQIDIHAGGEDLVFPHHENEI AQSEAANGKEFAKYWMHNAFLNIDNHKMSKSLGNFRTVREISEQYDLQVLRFFMLSAHYR SPLNFSADLMEASRNGLERIVNAAGNLKFLMGSAKSEEMTAQEREAFAGSEEFVKGFEAA MDDDFNTADAVAAVFELVKYINTTADAHSSRAYLQALLSRLVKLTDVLGLIVDKKEDMLE EEIEKLIAERQAARKEKNFARADEIRGTLLEKGIILEDTREGVKWKKA >gi|224461045|gb|GG657759.1| GENE 471 460375 - 461073 817 232 aa, chain - ## HITS:1 COG:BH0110 KEGG:ns NR:ns ## COG: BH0110 COG1045 # Protein_GI_number: 15612673 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Bacillus halodurans # 3 213 4 214 229 240 57.0 2e-63 MGIISYVREEVKVIRERDPAIKSNMEVFLYPSFKVILRYRIAHKLYRKKHFFLARWISQR AARKTGIEIHPGARIGKGLFIDHGSGVIIGETTEIGNNVTLYQGVTLGGTGKEQGKRHPT LRDNVMVSAGAKILGSFTIGENSKIGAGSVVLEEVPPNCTVVGVPGRVVKMGDQRIPRVD MDQVHLPDPISNDIRELQKDNIRMHRQIQEMEKRMRCMREDNIVILKEEEKE >gi|224461045|gb|GG657759.1| GENE 472 461403 - 462317 413 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 302 1 305 306 163 33 3e-38 MYDICVIGAGPAGISSAVYAASRGLETVVLEEKEVGGLLGGVSTVTHYSGIVEGETGASF AERLKRQAESYGIDIRREKVLSAELEGDVKTIVTDAGTYKAKAVIIAAGTTPRKLGIPGE KELCGHGVGMNAAKAAEKYEGRDVFVVGGADGAVKEALFLAKYAGKLRIIHFEDKLGAIP EFAEKAEKAENIELLLHTRLVELTGEKEVEALKLEDVHTGQTQIIRSEGCGVFIYAGSTP NTGIYPGLLQEDGYLVTDSRQQTNVPGVYAAGDICVKQVRQAATAVADGAVAAINAAAYC KNNE >gi|224461045|gb|GG657759.1| GENE 473 462418 - 464475 2263 685 aa, chain - ## HITS:1 COG:BH1154_2 KEGG:ns NR:ns ## COG: BH1154_2 COG0642 # Protein_GI_number: 15613717 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 447 685 35 272 274 226 49.0 1e-58 MDTKLKNRHKLAVGMIVIMILLSACIMIGQYDQSYRDSRRTEEKVKEGYLHSEEFLDLFL KSNYALYNIEEAGNLQDSSLDENYPSLMDSFKQIYPYTEYQVQDAGGKVIDKSLAGSAEK LKDSDMDRYAVGIVISYDKNGTPSVTSVTGEYKDSQMIELKRLISNMSGEDLYADYAMEY DAPQLLRPADRTYTYVMSEQNLNDFLDETLGYYGFAPDAIVYGIFALILLMCLAAVYFPS RPSFHTGEEKIFHVPFEAAAGVPLISFCLILSNVDVILGRNKGIPDMADFVLWTFFFASV YWGACCLRQIKVLGIRGYVQEKVLALRLWRETKKLGGRLWEWCREKMNRLYRSMDEIDFN DRSNKIIIKIVLINFVILLVLCSLWLFGIIGLIVYSVLLFIVLKKYFNDLKDKYALLLKA TNKIAEGNLDTEIEGDLGVFSPFRTEIEKIQNGFKMAVNEEVKSQKMKTELITNVSHDLK TPLTAIITYVNLLKEEKDEEKRQSYIKVLEQKSNRLKLLIEDLFEISKASSENVTLDLIN VDIVNLFKQVKLELEDKIEEAKLEFRLSYPEEKLVLRLDSQKTYRIFENLLVNIVKYAMP GTRVYIELLREGDDAVVRMKNISAAELDFNPDEITERFVRGDASRNTEGSGLGLAIAKSF VELQGGKLKIETEADLYKAEIRWKM >gi|224461045|gb|GG657759.1| GENE 474 464447 - 465154 890 235 aa, chain - ## HITS:1 COG:BH1153 KEGG:ns NR:ns ## COG: BH1153 COG0745 # Protein_GI_number: 15613716 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 5 233 6 232 232 253 57.0 3e-67 MEMNHVLIVEDDKEIREGVEIYLKSQGYEVYQAADGREGLEVIEREDIHLAIVDVMMPRM DGITMVVRLREKHDFPVIMLSAKSEEVDKIMGLNIGADDYVTKPFTPMELLARVNSQLRR YRKFAEKLNEKEASANVHVIGGLEINEDTVEAAVDGEPVKLTPIEYKILLLLMKSPGRVF SAEEIYERVWNERAITTDTIMVHIRNIREKIEINPKEPKYLKVVWGVGYKIEKQA >gi|224461045|gb|GG657759.1| GENE 475 465297 - 466052 680 251 aa, chain - ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 1 250 1 249 252 229 48.0 3e-60 MDPVTVRNIKIGEGRPKICVPIVETGKEEIAAQARALADLPLDMAEWRADWYTDAKDCGK AVETAAQLREALGDIPLLFTFRTAKEGGAARISEAEYVQLNTAVARSGYADLIDVEVCSF AGQARSIIREVQSAGVKAVASSHDFDKTPPKEELLGRLHYMKELGADIWKIAVMPNCGRD VLTLLDATLTVREEPDSRPVITMSMGSMGTVSRLAGEVFGSSVTFAAAGKASAPGQVNVD RMVQFLETLHV >gi|224461045|gb|GG657759.1| GENE 476 466068 - 467081 1024 337 aa, chain - ## HITS:1 COG:FN1041 KEGG:ns NR:ns ## COG: FN1041 COG4552 # Protein_GI_number: 19704376 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Fusobacterium nucleatum # 1 124 1 123 391 61 28.0 2e-09 MKIRKLSREEHVLTRPLYEEVFPDDSGSFVDYYYTEKIKDNKIYVIEEDGDIQAMLHLNP YEMSVNGRRQTAHYIVAVATRAAYRRRGYMGLLLNSALKAMYEAGETFTFLMPAAEAIYL PYDFRTVYEQKRSFCACADGQRPDEACADTDIRELSYGECQELAEAANRYLESRYDVFAV RSAAYYERLKKEYGADGGKLMLYRRDGVITDCRPYVPEVETGRPLIMVRPVDARRLLMSL SLRSLTAVCFCITDPVIEDNCRCVVLTGTEHSGVMLMEGKEENSEGTIPISVLGELIFGA CTAEDACRREGAHMSERMKEELNKVIPLSEIYINEVV >gi|224461045|gb|GG657759.1| GENE 477 467184 - 467732 731 182 aa, chain - ## HITS:1 COG:BS_yacN KEGG:ns NR:ns ## COG: BS_yacN COG0245 # Protein_GI_number: 16077159 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Bacillus subtilis # 2 155 3 156 158 205 65.0 4e-53 MRVGMGYDVHKLVEGRELIVGGVKIPHEKGLLGHSDADVLLHAIMDALLGAAALGDIGRH FPDTDPEYEGASSMKLLERVGGLVEEELYVIGNIDATIIAQRPKMAPHIEKMRENVAAAL HLDVSQVNIKATTEEGLGFTGAGEGISAQAVAGIETIANASYAVGPAEGGCGGCSGCPRS RM >gi|224461045|gb|GG657759.1| GENE 478 467737 - 468072 540 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568324|ref|ZP_03777349.1| ## NR: gi|225568324|ref|ZP_03777349.1| hypothetical protein CLOHYLEM_04399 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04399 [Clostridium hylemonae DSM 15053] # 1 111 31 141 141 189 100.0 4e-47 MTKGRFVFRLITGGYLAYLGIGLIKDALTEMPKNYTWYTLAGAAFAVIGIGWLLTGVRTY LKEGPQEPVDDDVIEEAQEETASEEIEENTAEVVETPEDGNNIEETDEEKE >gi|224461045|gb|GG657759.1| GENE 479 468616 - 469950 1697 444 aa, chain - ## HITS:1 COG:CAC0737 KEGG:ns NR:ns ## COG: CAC0737 COG0334 # Protein_GI_number: 15894024 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Clostridium acetobutylicum # 1 442 1 442 443 565 64.0 1e-161 MSYVDEVLEKVVAKNPAEPEFHQAVKEVLESLRVVVEANEEKYRRDALLERLVEPERQFK FRVPWVDDKGQVQVNTGYRVQFNSAIGPYKGGLRLHPSVNLGIIKFLGFEQIFKNSLTGL PIGGGKGGSDFDPKGKSDREVMAFCQSFMTELCKYIGADTDVPAGDIGTGAREIGYMFGQ YKRIRGVYEGVLTGKGLSYGGSLARTEATGYGLLYLTKEMLKINGHDIAGKTIAVSGSGN VAIYATQKAQQLGAKVVTVSDSNGWVYDPDGIDVSALKEIKEVNRARLTEYKNYRPNSEY HEGRGVWSVKADIALPCATQNELLIEDAKQLTENGCIAVAEGANMPTTLEATEYLQSHGV LFAPGKAANAGGVATSALEMSQNSERLSWSFDEVDSKLQGIMINICHNMADAAKRYDAEG NYVVGANIAGFEKVVEAMTAQGIV >gi|224461045|gb|GG657759.1| GENE 480 470223 - 472970 2090 915 aa, chain - ## HITS:1 COG:no KEGG:bpr_I1471 NR:ns ## KEGG: bpr_I1471 # Name: not_defined # Def: cell surface protein # Organism: B.proteoclasticus # Pathway: not_defined # 674 813 748 879 919 66 31.0 5e-09 MKRKRQICAVMAALLLSVNLVCTAFAQEDGAAGEPGTKQEETGTANDSADKTGDSTGKAE DESAGPEDTADTGGTPEPEKEETEPQKEAADGGTERAPQGQGDPVNTSPASLKETDEKSA GQPVLLEGGTLYTYGAAVTLKKDSVSGGTYVYDGTGENKLIDAPVSSLNTVYGGGKNEPV KGDVSITIDGVYVSTVYGGGFSDGTGSADVDGSVSIRITGSADAGSVYGGGYAEGKKGNA SANVSGSAAISALDEPANYHHYIYGGGKAYAAGAFDACADVGSTTLSVYGCTYSVRGGGS ASAAAGASGTARADVKGKVTIALSKVDIREVYGAGAASGTGAQAKAGAVEITVDGNEMMI LRGGGTADKEACADVAGNISIQVQNCFNLYGYLYGGGTASGGGSARAGSVDIDVTACVTP VEEQFEDYWVCHAFYGGGEASGSGSSADIKGAVSLAVSKGEVAGNIYGSGEASSGGTARS GAVRIELSDISGYFCKELGDAGQQCYPSVYAAGESDGQDKSSSAPEKIKTVLQAVTAENV WGGHVDTKGNPSASACTSSLVLADSTVTDTLTCFDDIALNRPLAIRAYLGKKDGVPAQLI NQGVKPGEVLVSCADTDSAADWFVLKNGELSYEVTDTASLWKIRKQTGPDQNVEVNMGQG AAGIKVNVEDSRRLADALLTEEEKKEITDGSVIGFELRVHEVDHMDSSVKAATEGAMKEN QAVAASLDINFFKIKNGAETKIAEPGVPMRIVIGVPEAYRADAKRRTFSVVRVHGSAAGA LTADVLQDLDTEADTVTIETDRFSVYTLIYEDVQPGTGGDINGGSGLPGGVDPEEPGGSP ALRPGTNGGGAGADGAYGASGHGSPAETDRAGSLATGDESPAAVYILAAVCALAVITAVA GKKLRSRGNEKEKGE >gi|224461045|gb|GG657759.1| GENE 481 473267 - 477082 4552 1271 aa, chain - ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 8 968 3 963 985 1081 55.0 0 MNGGRFMSSVKRVYVEKKPGFAVQAEDLRHEVKSYLGIGGIEDVRVLIRYDVENISEDIF ERALNGIFSEPPVDTLYKEEFPVKEGSRIFSVEFLPGQFDQRADSAVQCVQFIKADEQPV IRTATTYVIEGSITDEEFAAVKEHCINPVDSRETGMDKPETLVTAFEEPDDVIIFDGFKE MAEDELMELYRSLGLAMTFKDFRHIQDYFRAEESRDPSMTEIRVLDTYWSDHCRHTTFST ELKDITFGEGDYREPIEAAYKQYIADHSEIFKGREDKFVCLMDLALMAMRKLKREGKLED QEESDEINACSIVVPVTVDGVEEEWLVNFKNETHNHPTEIEPFGGAATCLGGAIRDPLSG RTYVYQAMRVTGAADPTVSVKDTMKGKLPQKKLVREAAHGYSSYGNQIGLATGAVKEIYH PNYVAKRMEIGAVLGAAPRRAVIRETSDPGDIIILLGGRTGRDGCGGATGSSKVHTEESI ETCGAEVQKGNPPTERKIQRLFRREEVSRLIKKCNDFGAGGVSVAIGELADGLRVDLDKV PKKYAGLDGTEIAISESQERMAVVVDPKDVEEFMAYAKEENLEATKVAVVTEEPRLVLSW RGKEIVNLSRAFLDTNGAHQETAVSVDIPNREDTVLVREEVKDVRAKWLDTLRDLNVCSQ KGLVEMFDGSIGASSVFMPHGGKYQMTETQAMVARLPVLTGDCDTVTMMSYGFDPYLSTW SPFHGAVYAVTESVAKIVAAGGDHSKIRFTFQEYFRRMTEDPHRWSQPFAALLGAYNAQL GFGLPSIGGKDSMSGTFEEIDVPPTLVSFAVDVASEKDIITPELKKAGSKLVWLRIETDA YDVPVYSQVMDQYKKFTGDIRSGKIISAYALDRHGIAAAVSKMAFGNKMGVKIEHNVDAR DLFAPAFGDIIAEVPADKVGELSITYTVIGEVTADAALSYGDMRIDLCEAGAAWTETLEK VFPTRSEAEGGPTAFFLAGKASEDGRLGEDGCFRTSNVHVCTHKIGQPVVFIPVFPGTNC EYDSARAFERAGARVVTKVFRNMDAADITDSVNVFAKAIGQSQIIMFPGGFSAGDEPDGS AKFFATAFQNEKMKEAVLKLLGERDGLALGVCNGFQTLIKLGLVPEGGIVGQNADSPTLT YNTIGRHISKMVYTKVVTDKSPWLAGAELGGVYTNPASHGEGRFVADDKTIARLFANGQV ATQYCDPDGNISMDEEWNVNGSYYAIEGITSPDGRVLGKMAHSERRGRSVAVNIYGEQDM KIFESGVKYFK >gi|224461045|gb|GG657759.1| GENE 482 477164 - 477874 808 236 aa, chain - ## HITS:1 COG:no KEGG:Closa_4227 NR:ns ## KEGG: Closa_4227 # Name: not_defined # Def: integral membrane protein TIGR01906 # Organism: C.saccharolyticum # Pathway: not_defined # 14 216 15 215 236 171 45.0 2e-41 MKKAHKIIAAAAMLFLITAILITSFQFAAYGDPDYKFYEKEYARYNVTEDLGMEMPEVMA VTKHMMAYLIGEEEELSVITDVDGERQDFFNEQDRAHMADVKNLFLGGLKVRTVCLVVFL LLLLLLAVMKADLKRLIPGAYFAGLGLFLIIVLLLGLLFASDFTKYFTIFHEIFFTNDLW LFDPATDYMIRMLPEGFFSDMTLRIGLVFVGSLAVIGLLMGIWRFAISKRAENKNK >gi|224461045|gb|GG657759.1| GENE 483 477971 - 478867 185 298 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 273 1 272 305 75 25 8e-12 MDINYELYKVFYYVATTLSFSEASKQLFISQSAVSQSIKALEKKLNETLFIRSTKKVRLT PEGEILLRHIEPAINLIKRGETQIMDAASHGGQIRIGASDTICRYFLVPYLEKFHKSFPG AHIKVTNATSIRCAELLESGQVDLIVVNYPNSYLGNAASVKTIKTFRDVFIANASFSALK GRALSFRELLEYPILMLDKKSTTSEFLHALFQQHQLDLVPEIELSSNDLLIDLASIGLGI AFIPDYCIPHKSTDLFTVQTKEKLPRRELAVAYNEHMPVSKAVEEFLRGLTGPEDTQA >gi|224461045|gb|GG657759.1| GENE 484 478875 - 481259 2685 794 aa, chain - ## HITS:1 COG:CAC1672 KEGG:ns NR:ns ## COG: CAC1672 COG1199 # Protein_GI_number: 15894949 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Clostridium acetobutylicum # 16 790 8 788 791 650 43.0 0 MTIAEEGREHMEQPLIRISVRRLVEFILQGGDIDNRTAGADKDAMLLGGKIHRKIQRRMG AGYRAEVGLKYVVGCRGFDLQIEGRADGIIEEDGKVVVDEIKGVFKELHTLGEPVEVHLA QAKCYAFIYAKQNSLKEIGVQMTYCNMETEEIKRFQFVYGAEELETWFYEVAGQYEKWAR YELKWKEKRNASIKGVEFPFSYREGQKELVSSVYRTILRKKKLFIQAPTGVGKTMATVFP AVKAVGEGLGEKIFYLTAKTITRTVAQQAFETLKEQALRLKVITLTAKEKICFCEEANCN PDYCPYAKGHYDRVNDAVYELITTSDDMSRDVIEEQARRWNVCPFEMGLDVSLWVDAVIC DYNYVFDPNAHLKRFFGDGVSGEYLFLIDEAHNLVERGREMYSAALYKEDLLEVKRLVKQ EDAKLAGRLEECNKQMLALKRECETYEVLDSVSHIYLKLMNLMAELERYLEECTEEEKRK KVLDLYFAVRMFLGIYDRLDENYLIYAELENSGRFKVRLFCVNPAGNLKEFLDKGNSTIF FSATLLPIHYYKELLSTQSDDYAVYAESPFAEEHRLLLLGTDVSTKYTRRGADMYERYAG YLKLVAQTKKGNYIAFFPSYQFMEQVYEAFAALTQDCEDMEYVIQSQYMSEEAREIFLEN FEEERSRSLMGFCVMGGIFSEGIDLAQDKLIGAVIVGTGLPQVCRERELLKTYFDGKGYR GFDYAYLYPGMNKVLQSAGRVIRTDEDRGVILLLDERFRDTRYRETFPREWTSMWYCSLR NVEALMRAFWEQDD >gi|224461045|gb|GG657759.1| GENE 485 481256 - 481966 624 236 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0819 NR:ns ## KEGG: Cphy_0819 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 23 234 47 256 280 153 38.0 5e-36 MHGRQRGEEDTCGIALRGTLEQQLFCEYVETKETEHKAVVVEAMIQKHLGMPAYWDIYHA ALAADAGKGDAILGTMLAARRIKESRRIMEHLSHPAVEKVFELSRTVGGEAHAFKGFLRF RELVNGVLFAEITPKNHVLTCLAPHFADRLPRENWMIYDNAHKTFVVHEAGKKWVLGLNE QLNIEMIHNISDREREYARLWQGFFRTISIQSRESRSRQLQHLPLRFQKNMVEFKQ >gi|224461045|gb|GG657759.1| GENE 486 482048 - 483364 1250 438 aa, chain - ## HITS:1 COG:CAC3343 KEGG:ns NR:ns ## COG: CAC3343 COG4277 # Protein_GI_number: 15896586 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with the Helix-hairpin-helix motif # Organism: Clostridium acetobutylicum # 1 422 1 424 440 524 58.0 1e-148 MSMYDKLNILSDAAKYDVACTSSGTSRSGDGTGMGSCEQTGICHSFGADGRCISLLKILF TNECIYDCRYCINRRNNDVPRTSFTPEEVCTLTMEFYRRNYIEGLFLSSGILKSPNHTME LIYATLFKLRRECNFQGYIHVKAIPGADGELVRRVGFLADRMSVNLELPTAESLRLLAPH KTRKNILAPMRLVQNGMAENKYEIQTYRSAPRFVPAGQSTQMIIGATPESDFQIMQVAES LYKKFDLKRVFYSAFIHVNDDATLPARTDEGPPLLREHRLYQADWLLRYYHFEASELLSE ENPNFNVLLDPKCNWALSHLEQFPVEINRADYKMLLRVPGIGYKSAVRIVKARRLGTLDF HDLKKIGVVLKRALYFITCSGRMMYPVKIEEDFIMRNLLDTKEKLPEGASGMTYRQLSLF DDMKFGTAGAVSLRFGRS >gi|224461045|gb|GG657759.1| GENE 487 483585 - 483992 390 135 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568336|ref|ZP_03777361.1| ## NR: gi|225568336|ref|ZP_03777361.1| hypothetical protein CLOHYLEM_04413 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04413 [Clostridium hylemonae DSM 15053] # 1 135 20 154 154 269 99.0 4e-71 MTIQELKDTMYVYTSPHSAAPSAHMTDAQWQEKFRLMKQTVRPSGLRRMPGSHICETAYR PDGWHDTYDGITNWQMYAMYINDTLSQLRLGETAYAWFTYQICDLLRFEHERLCSRYCPR DRMWTLWLSGRPAQK >gi|224461045|gb|GG657759.1| GENE 488 484014 - 486752 2246 912 aa, chain + ## HITS:1 COG:no KEGG:BSU21040 NR:ns ## KEGG: BSU21040 # Name: yonO # Def: hypothetical protein # Organism: B.subtilis # Pathway: not_defined # 1 846 1 819 839 723 46.0 0 MKKKSNGALSRQVHIFSLETGCFYTEKEEQLHRRMARYMKHKSTLRSADRDGYDAPCTEK YKALCSHVNKKIKDYKALLSEELVSDPSIVRTLPKEKLTDTRIISVFESALTRAADMKTG ELTTDIMVVQTYFYNVIKQLITNGYYHNGEKYVYFTSSAGQIRTKKTVFIKERLLNKIEP SLVCGLSRQMINEGGGINANKYLAYLALSNSATEPWTDFDIRKCIVVPDFETSVRCSVDF IHDDTYKIERKEMDVPIPHTDGCGMILPRLSRKNFMVRLPWMKGLLASFDFVRFIREHDA SPVVTDIYGKQWNILTDRIQVIFTESQFKMSRFYTSWEQYQRSFEACGCQAGICNMEEDY FPDATINYQMLQTLTDITEEEAAYLIRPSLHTLEKLSSDKKTILRVFGAVPGNPDKTWLQ QALLLYPEMITDEYIRARLREIKKSLVKEYRSGKLEIYGKYTFIVPDLYAFCERLFLGIR EPEGLLGNGDVCCRLFPGGRKLDCLRSPHLYREHAVRLNARNEACARWFTTNALYTSSHD PISKMLQFDVDGDRSLVVADPVFVEIAERNMHMDDIVPLYYEMKKARPAPLTPELLYEGI NAAYRGGNIGRYSNSISKIFNFVDWSRASKEKKQEALNVIKLLCMENNFCIDMAKTQYMP DRPREIDALIRTYTSQKLPHFFLYAKDKTESQVEPGGGSFVDRLETCIRYRPIRLAGKNF GKFTYTKLMCRPRIQIDEQVIAAYSRLNRKYHFRLNPGSAENVDYIIGSVRQELLGLNYS ETEVCDMLVKHLYRKKTPHKELLWQCFGHVIVDNLKHNLPEGSIQCEICGARFVPASPNQ KYCLDCRTIRPADTKTITCVDCGCAVEVDAKDTKTCRCSLHRAEHQKKLRQEQNRRAYEK RRQIQQAASAVT >gi|224461045|gb|GG657759.1| GENE 489 487008 - 487271 459 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568338|ref|ZP_03777363.1| ## NR: gi|225568338|ref|ZP_03777363.1| hypothetical protein CLOHYLEM_04415 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04415 [Clostridium hylemonae DSM 15053] # 1 87 1 87 87 145 100.0 9e-34 MNINWKLRLGNKITLTAVIMAIISLVYQILGMARIVPPISESQMIETAGMVINLLVLLGI VTDPTTEGVSDSPKALTYDQPKQKEQP >gi|224461045|gb|GG657759.1| GENE 490 487301 - 487849 560 182 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568340|ref|ZP_03777365.1| ## NR: gi|225568340|ref|ZP_03777365.1| hypothetical protein CLOHYLEM_04417 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04417 [Clostridium hylemonae DSM 15053] # 1 182 1 182 182 365 100.0 1e-100 MERSKNPLENLGKIKDTLSDLFLEDELVQKLIMPVPGDSQLSLKENWANHCFDTAVPPAS AGENQAFLCLETDAPLTAEAALQVRITVNVYACGSMLHMSDAEKQEYAAVHGLAGNRIDM ALAAIHRAVTADETLLRTFGTGRMQLAEEKPVTSLLQDERFYGKSLCYTIYQMPVRPKRQ VV >gi|224461045|gb|GG657759.1| GENE 491 487849 - 488640 608 263 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568341|ref|ZP_03777366.1| ## NR: gi|225568341|ref|ZP_03777366.1| hypothetical protein CLOHYLEM_04418 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04418 [Clostridium hylemonae DSM 15053] # 1 263 1 263 263 530 100.0 1e-149 MKLDYYDLISPSPFTIQGVGSIRPLTLREVSRLTGRIYSTYLALLNISPEKYCTEVNESL KPWYENLNEEQLSCLTMYDIAVSSAALQQSFSAIFDFFFAERVMYDRAKDAFLVFSPVKD EEGNDSIRVTGTIHKGNYLEVCDTILQFGHIDTKDTVDPARVKNKKGLARYQEMQKRKKK NRIKPKTDTDLELANIISAVCAMHNSINYTNVWDMTVYQLWDTFARLRNNEIYASGRTSV SVWGDKENKFDYNLWFKNITTTN >gi|224461045|gb|GG657759.1| GENE 492 488687 - 489418 933 243 aa, chain + ## HITS:1 COG:no KEGG:CbC4_4178 NR:ns ## KEGG: CbC4_4178 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_BKT015925 # Pathway: not_defined # 6 242 2 263 263 74 25.0 3e-12 MGLNSKMANREVQKLIFKDYTSKKPFLNLDFANTSTTELTGETMFAYGGQGHPKRVSFAG EKGGTLTIETQMQSVKLWELITGGDVSKSAKYTKRVVLPVAEGKVTLPEAPAEGFAPNFY AEDDDCGKEISASMTGASATLADADGITSVVAYYVKEVTDKVERINIKSTSFPKAFIVEG ETYMKTEDDDILPARMIAYKCVPQSTMSLAFANNGDPGAVTITCDLLADKDNNILDLIVE EEA >gi|224461045|gb|GG657759.1| GENE 493 489850 - 490389 570 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568344|ref|ZP_03777369.1| ## NR: gi|225568344|ref|ZP_03777369.1| hypothetical protein CLOHYLEM_04421 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04421 [Clostridium hylemonae DSM 15053] # 1 179 1 179 179 314 100.0 2e-84 MRKENPSIKTTLSMEDRILMPQELAEGYFTKDGEGRVSYTPYYADMMLINVFFLHCVDGI AFEVKEAENGGTEIAENIYEAVTADEGLMKLYDEFFEQDKDSIPSCPYKETVIQMYGILS DTEKMVEFRKQQIIHEKEDALTALLSAAAKKIEAADPDMLNLREALEYVKAAYSPVKAG >gi|224461045|gb|GG657759.1| GENE 494 490450 - 490647 250 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568345|ref|ZP_03777370.1| ## NR: gi|225568345|ref|ZP_03777370.1| hypothetical protein CLOHYLEM_04422 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04422 [Clostridium hylemonae DSM 15053] # 1 65 1 65 65 131 100.0 1e-29 MNNSDYVKVLGVTFDALEGLTVVAESNVKDLEDAGRYAAEHDDGAAIWICVPCRCDFYRI FQKIK >gi|224461045|gb|GG657759.1| GENE 495 490665 - 490955 265 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568346|ref|ZP_03777371.1| ## NR: gi|225568346|ref|ZP_03777371.1| hypothetical protein CLOHYLEM_04423 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04423 [Clostridium hylemonae DSM 15053] # 1 96 1 96 96 152 100.0 8e-36 MSEQYNINVQPVLNTDALYEQLNNQKYKLNVEVDGAALSSQLQSAVNSVTSGAAPAKVPV EFDVDSLIKGMNVINTTTTAFENIQKGAALAKRNLD >gi|224461045|gb|GG657759.1| GENE 496 492180 - 492638 52 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568349|ref|ZP_03777374.1| ## NR: gi|225568349|ref|ZP_03777374.1| hypothetical protein CLOHYLEM_04426 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04426 [Clostridium hylemonae DSM 15053] # 1 152 1 152 152 298 100.0 1e-79 MSKGLQFCIMPLKEDYVENYVRIIMEKNKYYCKIDGKIYNLKKIQDIIDENPEHPDIAKI YIAAVEEYHLSTNTMLDSVITFNNNEIPADYNEALKRMQEYNQASLPKSPPKLCCPRCGS TDIIRRQGLVGTNLFEEYYICYSCMNTFRRPR >gi|224461045|gb|GG657759.1| GENE 497 493834 - 494304 85 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568352|ref|ZP_03777377.1| ## NR: gi|225568352|ref|ZP_03777377.1| hypothetical protein CLOHYLEM_04429 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04429 [Clostridium hylemonae DSM 15053] # 1 156 30 185 185 300 100.0 3e-80 MGAVKIKCEYCNIPMVQTGYGIREFAILYNESLEGVSLKVMDSMGISEREYQDMIRRRDP RIQDEMARIKGGNPYALFLKEQFPGNFNLTAFESRNAQIKQEKEQKQREIESQKPRCPRC GSTDIKRNHRVINSDIGLYEKYYICYNCMNKFKRPR >gi|224461045|gb|GG657759.1| GENE 498 494979 - 495104 70 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVVNFYSFKEKYKIIFITAIYLYNPMFYNITLYYHMKDKH >gi|224461045|gb|GG657759.1| GENE 499 495098 - 495478 102 126 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568354|ref|ZP_03777379.1| ## NR: gi|225568354|ref|ZP_03777379.1| hypothetical protein CLOHYLEM_04431 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04431 [Clostridium hylemonae DSM 15053] # 1 126 1 126 126 257 100.0 2e-67 MGKNKYYCKIDGVVHNLSDVQEVLDGKSERNIILIMYEEHGMDIVSANTFESVLRFHNNE IPSDYNEALRRWQEYNQASLSRCPRCGSTNIKYNLEFASWMAAQGQEPVSDSVLKDNKCG NCGFKW >gi|224461045|gb|GG657759.1| GENE 500 495590 - 495994 198 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568355|ref|ZP_03777380.1| ## NR: gi|225568355|ref|ZP_03777380.1| hypothetical protein CLOHYLEM_04432 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04432 [Clostridium hylemonae DSM 15053] # 1 134 1 134 134 280 100.0 4e-74 MGKNKYYCKIDGVVHNLSDVQEVLDGKSERNITLIMNEEHGMDIVSANTFESVLRFHNNE IPSDYNEALRRWQEYNQARMPKSPPKPHCPRCGSINIKKLRRFVDPDMVTTGLVGSVDFV PFKSYRCNNCRYTW >gi|224461045|gb|GG657759.1| GENE 501 496475 - 496696 152 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568355|ref|ZP_03777380.1| ## NR: gi|225568355|ref|ZP_03777380.1| hypothetical protein CLOHYLEM_04432 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04432 [Clostridium hylemonae DSM 15053] # 1 71 1 71 134 145 100.0 1e-33 MGKNKYYCKIDGVVHNLSDVQEVLDGKSERNITLIMNEEHGMDIVSANTFESVLRFHNNE IPSDYNEALRRSS >gi|224461045|gb|GG657759.1| GENE 502 496708 - 496857 125 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDNQNHCTKDRIVHNLPIKNDVLDGTIERNITLIMSKEHVYPNVNKVL >gi|224461045|gb|GG657759.1| GENE 503 497875 - 498477 50 200 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568358|ref|ZP_03777383.1| ## NR: gi|225568358|ref|ZP_03777383.1| hypothetical protein CLOHYLEM_04435 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04435 [Clostridium hylemonae DSM 15053] # 27 200 1 174 174 346 99.0 4e-94 MPDIICPECQRKIRSYEVECPHCGFLLQKYLQENGIDDLKKKILCTKCGQEGNGLMGAVK IKCECCNIPMVQTRYGIREFAILYNESLEGVPEKVMDSMGISEREYQDMVCRRDPRIQDE VARIKGGNPYALFLKEQFPGNFNLTAFESRNAQIKQEKEQKQREIESQKLRCPRCGSTNI RGHRPWSAHSACNHCGYTWW >gi|224461045|gb|GG657759.1| GENE 504 499241 - 499732 -110 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568360|ref|ZP_03777385.1| ## NR: gi|225568360|ref|ZP_03777385.1| hypothetical protein CLOHYLEM_04437 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04437 [Clostridium hylemonae DSM 15053] # 1 163 39 201 201 315 99.0 6e-85 MNKKILCPRCGKEGELSGALEVKCEFCGIPMVQTKYSVQEFANKYNDTLKGVPEKIMENL SIGMFELEKMIQSGDTKILEEMIQIKGGNPYELFLKEQFPNTFDQNELKKREEQEKQETE ARLPRCPRCGSTDIRRWYAPIDIDSGSYVTRWSCEKCGKSWMN >gi|224461045|gb|GG657759.1| GENE 505 500616 - 500900 158 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568361|ref|ZP_03777386.1| ## NR: gi|225568361|ref|ZP_03777386.1| hypothetical protein CLOHYLEM_04438 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04438 [Clostridium hylemonae DSM 15053] # 1 94 33 126 126 153 100.0 4e-36 MHKVTDTKGIKEDVDVIKAYELEIIKLKKGQEGLSKNDKGYKDKQDDIDKFRKKISEALE YLNERYANVSEWYSSMVNDVTGNFFLDLNSRFKN >gi|224461045|gb|GG657759.1| GENE 506 501271 - 501561 146 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568362|ref|ZP_03777387.1| ## NR: gi|225568362|ref|ZP_03777387.1| hypothetical protein CLOHYLEM_04439 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04439 [Clostridium hylemonae DSM 15053] # 1 96 9 104 104 166 98.0 5e-40 MSEQYNINVQPELNTDALYEQLNNQKYKINVEVDGAALNSQLQSAVNSVTGGAAPAKVPV EFETGGLKNTLSTFNTFFAAGKNIGDLLKKTPLSPD >gi|224461045|gb|GG657759.1| GENE 507 502260 - 502829 165 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568363|ref|ZP_03777388.1| ## NR: gi|225568363|ref|ZP_03777388.1| hypothetical protein CLOHYLEM_04440 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04440 [Clostridium hylemonae DSM 15053] # 1 189 1 189 189 382 100.0 1e-104 MALIICPECKKQVSDQAEVCIHCGYPLAKLRNINNTEPDLSQSLYFKLRWIDSHNDVDEV SVLTSLITGINIIEASKLIEQNYSPIIIDGLSMEDAEKLKDVFAEKNISVAIEPDNYSTQ STTLGPNKNKLGIKAINYKIPKQDVNDFIFCPRCRSKSIETVAVSTAFSWGEPMNVCQHC GHKWKPGKR >gi|224461045|gb|GG657759.1| GENE 508 502941 - 503048 79 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVVGYLMLQKLLAQLFRKTYLKFWIPSQEKQLWL >gi|224461045|gb|GG657759.1| GENE 509 503213 - 505723 1164 836 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568364|ref|ZP_03777389.1| ## NR: gi|225568364|ref|ZP_03777389.1| hypothetical protein CLOHYLEM_04441 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04441 [Clostridium hylemonae DSM 15053] # 1 836 105 940 940 1432 99.0 0 MASIAEANNIKIKPNDSIDDLYTKLNAADLSVDDKSQVQKIKLANDEVKRQTAVREKLAE QQHLLSASDASDALNKGKQSVAQQVAQNVPGGKKTYQGLVENVNVVDAAQENVSAIKEYE KAIAGLESKQADYDPGSSEWKEAENDINSYRAAIETLSSDLDVKQNDLSALLASFSKNGE GLVAETGYEEQFKAVKKALNSVNNMDLAPEEQWQQSINDFFDGTSGKNFIKDRLLEAAKS GEDVVDVLHNMGLTLGDLGMTGKGKGDAFRNYFDGLKKSAEEAEETVSGIDGSFEGVNAA FSSQNAGDKWNSMAGYIEQAQQLYEDGKIGTDDFQSVAQWMAPQKINTEGYSTDAEAYKA AWEKSYNQVKNWFDTSNPYESMHNFARDLEATENDVGKNLIDINEETGKIVPKFESTAEA AKALGVNTDVVDTILHNMEDYGYEFDGIMFSGEGLKEYETSLDGIKEIYDTMNDSASKDR LGKLIEGWDEEYDKYEEDLSTLTEEQIVHIKFEYDQASIQAQIEELEVLQKAEGGKNSET NAGIIAGYESYIENAKEGLGLNEEGVELPIYFKTSEDTVNNLYQQLKDAKKGSDEYFEIQ AKIQNQEELQQAMYDEFSEENPDINNESDPSEITAAWENFFSQPRSLEVDAHLGEEEVLA QLDQLSNGSTITFSADVNGVEQSVTAIKDKDGIITYTTEINGETTQVQLNKNGTVTYNVN ANAVNGFKPTDKDGKANFTPETSAVDTWNPPQLPGDINYKGTFGNVGSPPVLSGVISYAV SSVSTGIGTIINGFKKKERKSTAPPTPAAPPSGSTALPAPTPTEAEAGGFPTANAL >gi|224461045|gb|GG657759.1| GENE 510 505795 - 508770 2819 991 aa, chain + ## HITS:1 COG:YPMT1.20c KEGG:ns NR:ns ## COG: YPMT1.20c COG5492 # Protein_GI_number: 16082802 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 653 777 95 219 220 62 31.0 4e-09 MANLKAGDIVFNHKQTEALLNNGYVTGSHARLVGSSFAEGSLGHISGRAYASGTEFKQEF DQLEILIDRMESAFKRISDSVETLSYNLTAQNRQMDSAIAKAKSNLSVYQKAYDTYMSKA NAVGLSGSWVSAVQNGSYDVSNITDEDLKDKIDDYKKYYEKALGLQKDIADLQKDLVDLA MKKLSNIDNYFSNRFDYNDDFGYANQISELNSALSQYQNELAKQVSSGTIKQYSDEWYDA QKKIADYTQKILDATWKKFEDTLDHMDRVSDNLKDFLSLKEAKGEPLTEADYQKQIDLNN ASIQKSYDLRQQLVKKQAVYDVGSKLYDSLAKEIAGLDSDIYDLMENNEKLKKSIWETRF TNPFEEIIDGLDATISSSKNLRSLLDKDSFFDESGALTDNGLANLALLGQEMAASKQKVA EYTAALKKLDEAYQNGILSQKDYDKSQKNMLKDIQDAAGDVQDYKDKIIDLYKDQMKAEI DYMDDYYDKRQKALDLDKKYYDFSKKMNAQTKSVNQLKAQISALQGVNNASAQAELRRLE QELAEKEEDLSELKKDHADDMIDRGYDKLSSGLKDSLNSTMDELTYNADMQEQVVADMLG KVVAMYGQAYGKINEIIANTGFAGSSGFNQNIANLGTQAGAAGQAVAGSAAQGSIQASGA VSDVNTGAINQNPSHGAILDEISKETDINNRPVAELTLSTSSLSLNEGKSAVVTARIRPT DAANKTLRWTSSNTKAATVSGGTIKGVKAGSAVITCSTTDGSGISASVSVSVTPAPAKPA PSQNAPSYGGIPFRYKKDYYPKNKLNVNSSIVDRLKSHDFDSSMSACRELYNYWGGGGYY SGTYSQNVWLLNKMRSAGYRRGTRSVPISGPDFIHDGELVIRKSDGGILVPLQRGDGVIP SGLTENLWDLAERAPQLLSDAGLYLPLPAAATHASREHTLNAQFSFGTLLNIEGNADKDI VDELKSALPALGKELTKIVSSELSDDYRKLK >gi|224461045|gb|GG657759.1| GENE 511 508837 - 509937 1014 366 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568366|ref|ZP_03777391.1| ## NR: gi|225568366|ref|ZP_03777391.1| hypothetical protein CLOHYLEM_04443 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04443 [Clostridium hylemonae DSM 15053] # 1 366 1 366 366 742 100.0 0 MAKSFNDFIFLDKRLSDLDSHYIAVDFDQDPDPSFAFAKDIEYGDTNRYRSEPGSVRTRP GDKLKFELHIIKDPDAYPAQADRIITPADIRELARWLTSTVSSELLAFEYGSGQEDAPRF FYGQFSDIQSFHVAGDVYGLRLMFDCSSPYGYTDDIVHTAACTGETVSYTITSHDDRLDE YCYPVIRMASAVTGQAYFLNLSDCCIYDQGTLVPAASNARLMEQLQEKVSAYGLAHGYAP EFQLTEDGQHIVTAGNDTAVCFLYRDVYGQEHKCIACYVASTYEYYIVRGGFLCFDLYRE LPVTIDGNSLFIFDDIGRMVKLSDLGVTDTDYMYWPRLVNGENTLLFWAEDCTFTITYRE TRKAGA >gi|224461045|gb|GG657759.1| GENE 512 509940 - 514541 4409 1533 aa, chain + ## HITS:1 COG:CAC0063 KEGG:ns NR:ns ## COG: CAC0063 COG4926 # Protein_GI_number: 15893360 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Clostridium acetobutylicum # 1206 1346 1390 1516 1645 67 33.0 3e-10 MNIKFNNNRQADPPHFYLGTPDHELLCPLNGIRADSVNLTLSLNDTSELSFTCDKYISAP GQKQSGQVMSSGYDLLNDFMCIYAERIGWFIMSAPQVSNDGDEEYKKVSAQSAEIGLTNN DLLGFKVNCGTTDSIEMLPPDNVEYIGDVPFAKKQVTFCNKEQPELSLLHMALSFAGIEG WSIGYIDETPKVYRSYKDGQLVEKVVQLKDEIGTFDVDSKSVYSFLTQDVEQFFECLILF DTEHMTINACRPENLGKDTNVTIGFRNLQNSNDISVDKNSIYTRYRVEGDDNLGIEYVNF GSNMIENLSSFLNENYMSETLISKYNAWLSDTESKRYEYMELSRRYNSQLNVMSELMDRL PLDDCSTEWNKFSDDNLRKAKDNYEAQLKGYETYYADENGDFDEEKLQNSPDANDYYQIR DVILPSISIEIANRELPTSEGELPYIDSYKTDWKLYGIDELLVNIDFYQSQKKSLEDAHY DIPYVDYEQNSGDDEENYPPHTRDMHEEMYSQYLDVVMQLDETVFGSCANALAERTAEYE AAEAAAETVQQQRALLAASVDKKNWKADGAEPFTWKELRTLSRLYRDTDYTNNNMFLTSS DDQVTAIDEQLKLYDAAVEDLEISSQPQYIYSTDLENFLTMYRYKQYTDHLELGDFLYLG TQDDYVVKLRLISLSYNPLSMDNDLRIEFSNMVKTGSRRYDTTYLLGLGGNTSKNRISGS AGGSGKNEGVTLTAGLIQKILSSTVFNNKVTNAINQHFQALTGQMIVAKNLEAEMIRVSD IRAENGFFQYLQSQLIAADKIVSDSAVIKQLDTLVANIRNAIVGSSSTETGIVVNLSADN ARIEEAFLKDVVARYISVNDLKAGTINTDQINILSEDGSLSIIGNTQTFKDKNGNVRLQL GEDAEGGFSFIVYDTSGTGVIMDQNGIRESAVSDGLIKNNMIAPSTVGKDKINWKEAGAV LDKDGNPVWNSAQITLNGQGLDIQFASVIDDISRLGTTMEGVETSLDAVEKSITDKVWRT DMVEITDETGSTVSKSIVDLLVQHNISLSGITDTVKEIQSDTGTLTERFTKAEQDASSFR QTVTETYATKEQVNTAQSELTQRAGEIEASVTDLSGNVSTLTTDMTGITQRVQDAEKNIT SVKAAADGVQTEITNAKGDKTTLKEKIDGISASVETVDGKIAEVELTADRLSSTVARKQD APPTAIRYIRDWLNGNSVNALNHWVECQVLTDNSNIAFSLTPEAYDQNGNHIEADNLKTY TDDILITFDENENPVSSSYITADSGKKCMQLDLGEVYTDIDKITVWHYYLDGRIYNHKLE VSADGHDWHTLYDSDFSGGYAEKEEGRVYYISDNTVDSKLSSITQNIDKISLAVEGTGDS LGNLSDNMESLSDDIRKNKSEIQVALEGILNRVTSVEGKTAETELTANGWKALFAQIGMY DYPDIVTNVLMSVNGLEVSNPDTGMKTVMTTEEFAGYYNNDEMFRLEKDLTKTERIEVRN GIDTTAIKMVPKTYTIDGVTFNALPFVKSGGTS >gi|224461045|gb|GG657759.1| GENE 513 514604 - 516703 1151 699 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568369|ref|ZP_03777394.1| ## NR: gi|225568369|ref|ZP_03777394.1| hypothetical protein CLOHYLEM_04446 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04446 [Clostridium hylemonae DSM 15053] # 162 699 1 538 538 930 100.0 0 MASGSWNFSTNNQYITGRIRWSSTSNGSKANTSTVTAYLDYMKSSSSTAATYGTFNGAIS INGSSGAVSKYITLSANNSWVNVGSRAVTVGHNNDGSKSTTIAASGGISGTSFSSSSTSK SVALDKIPRYANITTWKNTAVTQTSATFQWGADASCSAVYYMIGNGSWAATSGSTFTINN LAPNTSYSVKLKVRRSDSGLETTSGAITVKTKPIASISNSSLSFDIGGDLELTLANYALN ASTFKFNVERDDGTWTTSLLEASSDQNIPGITLPLSGITDALYSCCATKNEMNFKISCGT TINGTFYENISYGTARVTDSDPVFTDYSHGNTDTATSSVLQNAAYLIQNYGNMQAQISAA NRAVPKNHAAVTEYIVEVTDSKDEVKKQLNAEYSDSEVLINLGTLSEPGDYNIRIYARDS RGNISGTVTKTFYVLPYSRPASKVALARINEFEKEITIDFSSVYSRLKIGTASKNNAFAV KYRYAEVGTSYESTYTTITGITSADIPGSPNELKATYLKDSGDDPFITLDIEKSYNFEFV VSDRITTTTETTMVDKGIPIFMPCDNGKVTVGMLPDFDSSADFQVGTDIMATDSDGTQRL ILDEIKKTNTDLDNKFNELNHNLPTTIIISGDGSGYGNVDTKIDSKNYTVIAAKKDGMVA IPYVSSNSLTWIIKIRTVTDFSVVTGKVDNIEVTYIPKL >gi|224461045|gb|GG657759.1| GENE 514 517138 - 518097 326 319 aa, chain - ## HITS:1 COG:SP0890 KEGG:ns NR:ns ## COG: SP0890 COG0582 # Protein_GI_number: 15900773 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 44 318 47 321 321 225 40.0 7e-59 MQDSLQEGQLKELQVVLQVVLSNCSITQEKQELRVTDRSWLVDLEEFLMSKALEGKSPGT VKRYRYELYRLLSYINKNVKDITDGNISGYMRTYKAIRQVTNQTLKNVRAVYSSFFIWLR DRDRIRKNPMALVEAIKVEQKIRKPYTDEERELLLRSCKTLRDKAMMEFFYSTAVRVSEL AALNREDVHFVSKDLIVMGKGNKERTVYLNDRTNMYMKEYLESRTDSNQALFVSLKKPHG RLGKTGIEDIIRRTGQIAGVERAYPHRFRRTAATNALNRGMPVQEVAQLLGHAKLETTMV YCSVDQAGVKYHHQKYLSA >gi|224461045|gb|GG657759.1| GENE 515 519015 - 519473 372 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568372|ref|ZP_03777397.1| ## NR: gi|225568372|ref|ZP_03777397.1| hypothetical protein CLOHYLEM_04449 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04449 [Clostridium hylemonae DSM 15053] # 1 152 1 152 152 302 100.0 7e-81 MNILKYLMGISPPLTFSSFFIYLLGLIFLCKELFLAADWLLNYFGITSRRVIKREQDRKQ ISNINYRLDAQAENIIKLCAANRVILSDRINQKYKVYLSKGYIPEDEYEEFVTLHKVYNE IGGNHTGDEKFRKCIKQLPIKPEDTQTNTYKE >gi|224461045|gb|GG657759.1| GENE 516 519478 - 520281 356 267 aa, chain + ## HITS:1 COG:BH1295_1 KEGG:ns NR:ns ## COG: BH1295_1 COG3409 # Protein_GI_number: 15613858 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Bacillus halodurans # 173 266 281 386 459 68 40.0 1e-11 MNINIKETNLSFGSLSRRSTTTRIILHHAEASSCDASVIHNWHKANGWAGIGYHFVVRKN GLIERGRPEWAVGTHASGSNSNSLGVCFEGAYMKETMPAAQKNAGKDLVAYLKRKYGITK VQRHSDVCATSCPGINFPFSEIAGASVSGTVTVSSAGQSAGQNSSSSWISRLQSECNRQG FSRQAVDGIAGRNTLAGCPMLSPGASGGITKLLQEKLISLGYSCGSSGADGILGQDTQRA VKAYQKDHGLAADGIVGPATWKKLLDL >gi|224461045|gb|GG657759.1| GENE 517 520506 - 521204 594 232 aa, chain + ## HITS:1 COG:CAC0450 KEGG:ns NR:ns ## COG: CAC0450 COG0745 # Protein_GI_number: 15893741 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 227 1 225 227 197 45.0 1e-50 MKRIFLVEDDLSLINGLSFALKKQGYETDIARTSLEAQNLWGNEDYDLVILDVSLPDGSG YELCKIIRRTSKVPIIFLTAADEETDIIMGLDIGGDDYITKPFKLAILLSRINALLRRSD NFNETTTELNSNGIKVKLLKGEVYKNESQLDLTASEYKLLCLFMENPDIVLSPEQILSKL WDCDEKYIDSSTLTVYIRRLRTKIEDTPGQPQKILTVRGMGYKWNAADRGAL >gi|224461045|gb|GG657759.1| GENE 518 521402 - 522238 562 278 aa, chain + ## HITS:1 COG:CAC0451 KEGG:ns NR:ns ## COG: CAC0451 COG0642 # Protein_GI_number: 15893742 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 6 273 143 411 416 167 36.0 2e-41 MENAVEQIKEYISGNQNARIECDDEGELYRLFHEVNSLVSILNAHAENEEKAKKFLKDTI SDISHQLKTPLAALSVYNGIMQEEAKDLPAVREFTVLSEQELDRIEILVQNLLKITKLDA GTIVIEKTDENMSEMMGSIERHFLYRAGQEGKNFCLCGDDTVMLSCDRSWMLEALSNIVK NAFDHTEQGDTVSIEWKQFASAVQITVKDNGSGIHPEDLYYIFKRFYRSRFSKDRQGLGL GLSLAKAVIEAHGGTIEVDSELGAGTTFTVSFLIPTKL >gi|224461045|gb|GG657759.1| GENE 519 522310 - 522993 337 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 223 1 221 245 134 34 2e-29 MDLLEVRSISKTYGSGEAAVHALKNVTFSVSKGEFVAVVGESGSGKSTLLNMIGALDTPT HGRIFIDSKDTFAMKESSLTVFRRRNIGFIFQNFNLIPELSVEQNIVFPLLLDYQKPRKK QLEELLSVLNLKERRHHLPSQLSGGQQQRVAIGRALITRPALILADEPTGNLDSQNSREV IALLKEAAKNYEQTIIMITHSRSIAQTADRILQVYDGVLTDLGRCRE >gi|224461045|gb|GG657759.1| GENE 520 522990 - 524801 1182 603 aa, chain + ## HITS:1 COG:CAC0454 KEGG:ns NR:ns ## COG: CAC0454 COG0577 # Protein_GI_number: 15893745 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 47 600 225 828 832 115 23.0 2e-25 MKSYLSLIPISAKVHRRQNRMTLLCIIFAVFLVTAVFSMAEMGVRMEQTRLMDKHDNLSL HDLAGSAMGQSLYLIAAVLFVLILTAGVLMISSSINTNVAQRTNFFGMMRCIGMSKRQIV RFVRLEALNWCKIAVPAGVVLGMVTTWGLCAALRLLVGGEFSHIPLFGISITGIAGGIAV GIVTVLIAARSPAKRAAKVSPAAAVSGNTESTGNVRNAVNTRVGRIETALGVHHAVSAKK NLILMTGSFALSIILFLCFSVLIDFIGYLMPQSSATSDINISSESSSRLIDSRLIGRFKG MEGVKQVYGRRSSFDVPAKINNGKIRSNKIDIISYDDFDLDCLTKDDVLKKGSDISKVYG NSNYVLATWDKDSPLKIGDKIQTGGEQLEIAGFLNYDPFNSDGTTNGKITIITSGDTYIR LTGVSDYSLVMIQTTNDATNKDVEAIRQAAGSGYTFSDRRSERTTGTYMAFVFCVYGFLA IIALVTVLNIINSISMSVSARIKQYGAMRAVGMDERQITKMIAAEALTYALSGCIVGCTA GLLLSKLLYDTLIAAHFSYAVWNVPVTLLLMILLFVFLAAFAAIYAPAKRIRNISVTETI NEL >gi|224461045|gb|GG657759.1| GENE 521 524881 - 525126 146 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568379|ref|ZP_03777404.1| ## NR: gi|225568379|ref|ZP_03777404.1| hypothetical protein CLOHYLEM_04456 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04456 [Clostridium hylemonae DSM 15053] # 1 81 1 81 81 138 100.0 1e-31 MYKVVSSKTFVDMVGQCRPLCIADMEIDTGDAELINRRRLLEIVRTSTEIRCYQDDLLER YDIYYREDRDARLARVLMEAG >gi|224461045|gb|GG657759.1| GENE 522 525157 - 526086 818 309 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568380|ref|ZP_03777405.1| ## NR: gi|225568380|ref|ZP_03777405.1| hypothetical protein CLOHYLEM_04457 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04457 [Clostridium hylemonae DSM 15053] # 1 309 1 309 309 579 100.0 1e-163 MYNEERKKEYLEYKKQDYLRHLFQDSGAYEEELGQDLCEMGTSELLHFLIRYDGYRTFED KRRQLSNYVEWCVIKGYAAFNWISVKVVPNRELKDIFLAAKEEFYISAELYTQYLERLLD SGYGVYIASVFASIYEGISGKGFYNLVNLRSSHIGRQGGLTQLPDGTERILSPELAGMLL ATAEVKKIRNEKTVHYVSSLYPDSVWKIRNNETVSYSKVQRKFVYLLEEMKKILGEKRIS KTSIERSGYFNRIYYEVLADGTDIRSLKLGTDKEGVRENQSYGRYFEDSGWNMDMRKFIR SFQSYLNQI >gi|224461045|gb|GG657759.1| GENE 523 526092 - 526259 57 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568381|ref|ZP_03777406.1| ## NR: gi|225568381|ref|ZP_03777406.1| hypothetical protein CLOHYLEM_04458 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04458 [Clostridium hylemonae DSM 15053] # 1 55 1 55 55 112 100.0 1e-23 MFYNKNTEHRRASYFTPGRQERSMSLPPGVMSFVITLGNEIDVDSSCMLCCHIEV >gi|224461045|gb|GG657759.1| GENE 524 526410 - 526925 227 171 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568382|ref|ZP_03777407.1| ## NR: gi|225568382|ref|ZP_03777407.1| hypothetical protein CLOHYLEM_04459 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04459 [Clostridium hylemonae DSM 15053] # 1 171 1 171 171 316 100.0 5e-85 MTKRRFIPIIVLGLTFFLRSTSYADSSWYWISTTRPYDVLPYVAAVTLAVETLAVNWICR IHRPLKVFLVMLLGNLISFSLPYIGASFDPVFHIPGHPWHSVSMYAESLPFYTVGAFYLL LTIAAELPVEYCMLRRSAPDSRRLLYTIVGANTATTIFVAVTERLFCRGHW >gi|224461045|gb|GG657759.1| GENE 525 526947 - 527564 703 205 aa, chain - ## HITS:1 COG:CAC2982 KEGG:ns NR:ns ## COG: CAC2982 COG0489 # Protein_GI_number: 15896234 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Clostridium acetobutylicum # 1 197 62 268 277 200 46.0 2e-51 MGILDADITGPSIPKMYGLHESAKGSDEGMFPCEAKDGTRIMSVNLLLENESDPVIWRGP VIAGVVTQFWSDVMWGELDYLFVDMPPGTGDVPLTVFQSLPVNGVVIVTSPQDLVQMIVK KAYNMARQMNIPVLGIVENYSYLTCPDCGKKISVFGESHIDEIAAELDIPVLGKMPVDAE LAGAVENEKFAEVSNEYLSAAVNKI >gi|224461045|gb|GG657759.1| GENE 526 527735 - 528331 627 198 aa, chain + ## HITS:1 COG:BH3781 KEGG:ns NR:ns ## COG: BH3781 COG1158 # Protein_GI_number: 15616343 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Bacillus halodurans # 2 194 224 414 423 248 65.0 4e-66 MEVIYSTFDELPDHHKRVSEMVIERAKRLVEHKKDVMILLDSITRLARAYNLTVPPSGRT LSGGLDPAALHMPKRFFGAARNMREGGSLTILATALVDTGSKMDDVVYEEFKGTGNMELV LDRKLSERRVFPAIDIPKSGTRREDLLLSGEEQEAVDSMRRALNGMRAEEAVDNILNMFT RTKSNNELIQMVKKTKII >gi|224461045|gb|GG657759.1| GENE 527 528432 - 528635 327 67 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227871848|ref|ZP_03990248.1| possible ribosomal protein L31 [Oribacterium sinus F0268] # 1 67 25 91 92 130 83 3e-28 MKEGIHPTYHQATVTCNCGNTFVTGSTNEEIHVEICSKCHPFYTGQQKAAQARGRVDKFN KKYGMDK >gi|224461045|gb|GG657759.1| GENE 528 528706 - 529641 1057 311 aa, chain + ## HITS:1 COG:CAC2886 KEGG:ns NR:ns ## COG: CAC2886 COG3872 # Protein_GI_number: 15896140 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme # Organism: Clostridium acetobutylicum # 2 291 3 296 317 208 42.0 9e-54 MKSSNIGGQAVLEGIMMKNKDDYAVAVRKPDGEIIVEKDTYSSIVKWKALTRIPFVRGIF NFIDSMVLGIKTLTYSAGFFEEEEEEKELTEAEAAKKEKQDKWLMGGTVAVSVVIAVAVF MVLPYFLSGFLKPLVPSYHVRTVIEGFVRIGIFIAYVLLISRMEDIQRTFMYHGAEHKCI NCIEHGLPLNVDNVRESSRQHKRCGTSFLFFVLAVSIILLLVIQVESPLMRVVIRIALIP VIAGISYEILKLAGSSENPVVNFLSRPGLAIQKLTTKEPDDSMIEVAIQAVEAVFDWRAY EAENFQPTEDL >gi|224461045|gb|GG657759.1| GENE 529 529589 - 530515 416 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223485211|ref|YP_002587537.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3] # 11 297 15 289 304 164 37 1e-38 MTGEHMKQRISNLQKIYKEGTRLLAGAGIEEAGIDAWYLLEYVTGITRAAYYAHPETELD ADKEDAYFAHIGRRARREPLQHITGEQEFMGYSFRVSGHVLIPRQDTEILVEEALKVLAP GMRILDMCTGSGCVLISILKAGRERLRMERLEGTGSDISPEAVAVAEYNAARLLGRTETG RGNNGCCARFCTGDLFEKAEERYDLIVSNPPYIRTEEIRKLQREVRLHDPYIALDGKKDG LYFYRRITAESAAYIAEGGYLMFEIGHDQAEDVCALLEQSGYADVFVKKDLAGLDRIAGG RYNRKCTQ >gi|224461045|gb|GG657759.1| GENE 530 530549 - 531622 1344 357 aa, chain + ## HITS:1 COG:CAC2884 KEGG:ns NR:ns ## COG: CAC2884 COG0216 # Protein_GI_number: 15896138 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Clostridium acetobutylicum # 1 354 1 354 359 384 56.0 1e-106 MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED SLLMLEEESDEEMRELAKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAGAGG DEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYESGV HRVQRVPETESGGRIHTSTVTVAIMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTDS AVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQASEAEARRSQIGTGD RSEKIRTYNFPQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIAADQAAKLSNLQDE >gi|224461045|gb|GG657759.1| GENE 531 531629 - 533383 2019 584 aa, chain + ## HITS:1 COG:CAC1613 KEGG:ns NR:ns ## COG: CAC1613 COG1132 # Protein_GI_number: 15894891 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 5 572 4 570 579 615 52.0 1e-175 MKEKLKKLIAYYKPYKLLFYSDLFFAVLGAGVTLVIPLIVRYITNQVVYYEPPEARQAII MLGAVMIALVLLEFGCNYYIAYFGHMMGARMEADMRSDIFGHYQKLTFAFYDNQKVGHLL SRITSDLFDISELLHHGPEDVLISVIKIAGSFLILVNVNARLTAAAFAFIPVMFLFAVYY NKKMKQAFSRNRAKIADINSQIEDSLAGIRVVKSFGNEKEEMKKFDRGNNNFVEAKKTSY RYMGMYNSGLNALTTLVTVGVLVAGGSYLTTGTVGVSDLITFLLYINNFTEPVKKLVNSA EQFQNGYTGFERFLEILSIAPDIADKEDAVHVEKLKGEIIFRDVSFHYEDNAEKVLSHID LKADAGDYIALVGPSGAGKTTLCSLIPRFYDVTSGEILVDGTDIRDLRLNDLRNNIGIVQ QDVYLFAGTIMDNIRYGKPEAADEEVVRAAKNANAHEFIMSFPQGYDTDIGQRGVKLSGG QKQRLSIARVFLKNPPILIFDEATSALDNESEKVVQQSLEGLAKNRTTFVIAHRLTTIQN AQKILVLTEDGIAEEGTHEELLAKQGVYETLYYGKRRGNVHGAG >gi|224461045|gb|GG657759.1| GENE 532 533406 - 535370 2219 654 aa, chain + ## HITS:1 COG:AF0876 KEGG:ns NR:ns ## COG: AF0876 COG0737 # Protein_GI_number: 11498482 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Archaeoglobus fulgidus # 7 605 1 555 584 206 30.0 8e-53 MKTRRRMRQAMLTVIMLCTLCVSTVLAKNEEKSSRADEVTVLFTHDIHSHLDEFKVADGK VGGFGRLKTALDKERSGNPATFVFDGGDFSMGTLYQTVYETEAAELTMLGRLGYDAVTFG NHEFDYRSEGTANMFHSALENAQDDPSIVLPKFVTANIDWQKNDSKDNRLIQNALEDYGS TPYTVVEREGVRIGVFGVLGEDAEACAPESGLNFEPIVDTSKEVVKELEKEGVDMIVCLS HSGTNEDEDKSEDEILAKEVPQIDVIVSAHTHTKLEEYIKSGDTYIVSAGCYGEYLGDLK MSPTDDGRWELEKYTLHHLDETVVPDAKVNEELATYKKLVNEEYLSRFDYTFDKVLAENG VAFTQMDRFAGELKEDPLGSIIADSYVYAVEQAEGDAYEKVDAAVAPSGTIRDTLQKGAL TVSDAFNVCSLGIGADRIPGYPLVSVYLTGAELKTAAEIDVSVSPIMTTAQLYPSGLHWT YNPNRMMLNRVTDAALYDDLSQDSEKTRKELEDDKLYRVVAGLYSAQMLGAVEDTSKGLL KITPKDRDGKAVKDFEKHIIHDKNGAELKEWYALAGYLESFDKNKEGISQIPQHYAKAQG RKEEIDSKNIIELVKQPNKFAFIVYGAVIIIILLLILTVRFLIKRRKKKKNMIY >gi|224461045|gb|GG657759.1| GENE 533 535442 - 536368 1005 308 aa, chain + ## HITS:1 COG:jhp0277 KEGG:ns NR:ns ## COG: jhp0277 COG4866 # Protein_GI_number: 15611347 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori J99 # 6 294 2 283 290 146 33.0 5e-35 MIEINFKRPQLEDKELISHYFNHHTSRSCERTFVNVYLWAKHYKVEFAVVEDALVFKSES KSGLSFAYPAGEPGQVRKALEVLMEYSRERGSAFSLYNVTPDNFAQLEEWYPGRFKIEYS ESDADYVYESEKLATLSGKKLHGKRNHINKFKSTYEGRWSYEPITQDNVEECFQMALKWR NQNGCEDDPDKNSEMCVTLNSLRLFEELELTGGLLRVDGSIIAFTIGEPVCSDTFVVHIE KAFADIQGAYPMINQQFVEHECMDYKYVNREEDTGSEGLRKAKLSYRPVFMVEKGFVTEK EDKGEEAE >gi|224461045|gb|GG657759.1| GENE 534 536365 - 537555 1621 396 aa, chain + ## HITS:1 COG:CAC2832 KEGG:ns NR:ns ## COG: CAC2832 COG0436 # Protein_GI_number: 15896087 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 394 1 392 393 432 56.0 1e-121 MIAEKMKNMVANSSAIRAMFEEGNRLAGIYGAENVYDFSLGNPNVPAPEAVKTAIKELLD EDDPVALHGYTNSNSGYADVRAAVAKSVNGRFGTHFTEENIVMTVGAAGGLNVILKTLLN PGDEVIAFAPYFGEYRSYTNNYDGVMVEISPNTADFQPKLDEFEQKITPKTKAVIVNTPN NPTGVVYSEDTIRKMAAIMDAKQREFGTDIYLISDEPYRELVYDNAEVPYLTKYYDNTIV GYSYSKSLSLPGERIGYLVIPDEVADSEEVQAAANVATRILGFVNAPTLQQKVVAKCLGE KTDISYYDRNRETLYHGLKECGFECIKPEGAFYLFVKSPVEDEKAFCQAAKKYNILIVPG SSFACPGYVRLAYCVSYETIVNSLPKFKELAAEYFA >gi|224461045|gb|GG657759.1| GENE 535 537577 - 538632 1140 351 aa, chain + ## HITS:1 COG:L0065 KEGG:ns NR:ns ## COG: L0065 COG0079 # Protein_GI_number: 15673188 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Lactococcus lactis # 3 351 2 351 360 339 47.0 4e-93 MKAFEQNIRKVEPYVPGEQPQRRVIKLNTNENPYPPAPGVTKALREMDADCLRLYPDPEA DVLVRELADYYHVGKDQVFVGVGSDDVLSMCFLTFFNSDKPILFPDITYSFYKVWAGLYK IPYECQKLSDDFHMVKEDYYKENGGVIFPNPNAPTALYEELDTVEDIIAHNEDVVVIVDE AYIDFAGRSALELLDKYNNLLVVQTFSKARSMAGMRIGYAIGSPLLIKYLNDAKYSFNSY TMNAASLVCGAEAVKDRAYFEDRVRAVVETREWAKVELGKLGFRFPDSGANFIFATHPDH DAKELFEALKANDIYVRYWGSERIKQYLRISIGTREEMTALFSFLNKYMNR >gi|224461045|gb|GG657759.1| GENE 536 538644 - 539156 763 170 aa, chain + ## HITS:1 COG:PH1658 KEGG:ns NR:ns ## COG: PH1658 COG2426 # Protein_GI_number: 14591427 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 23 157 12 151 159 66 35.0 2e-11 MTETLVQNIIDVLGGSMGKEAIVFIISMIPILELRGALLVAGPLLGVPVATAIPLCIIGN IIPVPFILWLITPIFNWMKGTRKLKPMVDKLEAKAMSKSDKIEKYEFWGLVLFVGIPLPG TGAWTGALIASLLGVKFKKAFPAIILGILMATVIMWFISYVLLGGVNLLG >gi|224461045|gb|GG657759.1| GENE 537 539166 - 539990 1006 274 aa, chain + ## HITS:1 COG:lin2953_1 KEGG:ns NR:ns ## COG: lin2953_1 COG2207 # Protein_GI_number: 16802012 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Listeria innocua # 40 273 28 265 343 103 29.0 3e-22 MEYSHEIIMPNDDIPFKMFVFEGRNGNYMREKHWHRSIEIFALFEGELEFYVNELRYSLK PGEFMLVNSNEIHSIHSPKKNMTIVLQIPLATFEKYYTEERFIYFSHSSRLQDEEVMKLI GDMYETYAKKKCGYELKVQSQFYMLIYLMVTKYRETDVDGEMVKHNRKLNKLSTITAYMK DNYARDLSLDSLSQTFGYSPTYLSRMFQKYARMNYKTYLDNLRLEHAYKDLVNTEQAIGE IAIQNGFPNSKSFSKVFQKKYGMLPSEFRKEHNT >gi|224461045|gb|GG657759.1| GENE 538 540278 - 540895 729 205 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2388 NR:ns ## KEGG: Cbei_2388 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 205 1 206 207 258 59.0 1e-67 MEIQNVKDEAFKTYGRVLEEYDVCRLRKEMEHTPLPSDSVIYVPSVEELEALPAAECFRD MAYGGLPIQVGYCNGSNHAMNALEYHRCSEINVAVTDLILLLGRQQDLEADYTYDTSKAE AFFVPAGTVLEVYATTLHYAPCTASGSGFRCVVILPKGTNTELDFLVSKEGEGKLMTARN KWLIAHREAGIEGAFCGLKGSNITV >gi|224461045|gb|GG657759.1| GENE 539 540929 - 542413 1716 494 aa, chain + ## HITS:1 COG:CAC2610 KEGG:ns NR:ns ## COG: CAC2610 COG2407 # Protein_GI_number: 15895868 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Clostridium acetobutylicum # 1 493 1 489 490 734 71.0 0 MNNMPEVKIGVVAVSRDCFPESLSVTRRQNLMKAYTDKYGEEGIYECPVCIVESEIHMVQ ALEDVKRAGCNALVVYLGNFGPEISETLLARHFDGPKMFIAAAEETGDDLVQGRGDAYCG MLNASYNLKLRNVQAYIPEYPVGDASDCADMIHEFVPIAKALVGLSDLKIISFGPRPLNF LACNAPIKQLYNLGVEIEENSELDLFEAFHKHAGDERIPAVVKEMEAELGSGNKKPEILQ KLAQYELTLKDWVEEHKGYRKYVAIAGKCWPAFQTQFGFVPCYVNSRLTAQGIPVSCEVD IYGALSEFIGTVVSGDTVTLLDINNTVPKDMYEQEIKGKYSYGLQDTFMGFHCGNTAAGK LSFCEMKYQMIMARTLPEEVTQGTLEGDILPGDITFYRLQSTADNVLRAYIAHGEVLPVA TRSFGGVGVFAIPEMGRFYRHVLIEGGYPHHGAVAFGHYGKALFEVFKYIGVPVEEIGYN QPAGVRYPTENPWR >gi|224461045|gb|GG657759.1| GENE 540 542418 - 543878 1715 486 aa, chain + ## HITS:1 COG:CAC2612 KEGG:ns NR:ns ## COG: CAC2612 COG1070 # Protein_GI_number: 15895870 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 4 482 5 498 500 372 39.0 1e-103 MLYIGIDLGTSAVKLLLMDEEGSIKNIVSKEYPLFFPHPGWSEQHPEDWYEKSMEGIREL TEGYDRSKVAGISFGGQMHGLVALDDRDEVIRPAILWNDGRTGEETDYLNDVVGKDRLSQ YTANIAFAGFTAPKILWMKKNEPENFARMAKIMLPKDYLAYRLSGSFCTDVSDASGMLLM DVKNRCWSREMMDICGIKEEQLPRLYESYEIVGTLKKEVAGELGLSADVKVIAGAGDNAA AAVGTGTVGDGMCNISLGTSGTIFISSRKFGVDEHNALHSFAHADGNYHLMGCMLSAASC NKWWAEDILKTKDYAAEQEAIHALGENNVFYLPYLMGERSPHNDPKARAMFIGMSMDTTR ADMTQAVLEGVAFGLRDSLEVARSLGVSIERTKICGGGAKSPLWKKIIANVMDMKVDVIE SEEGPALGGAMLAAVGCGEYPDVETIAKKIVKVVDTVEPEPELVEKYEEKYSRFKKIYPT VKCLYR >gi|224461045|gb|GG657759.1| GENE 541 543838 - 544113 155 91 aa, chain - ## HITS:1 COG:BH3136 KEGG:ns NR:ns ## COG: BH3136 COG3326 # Protein_GI_number: 15615698 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 4 80 8 84 94 68 45.0 3e-12 MAFFVFYLIFVNVLSFLLFGADKSRAVNRERRIPERTLLFTALIGGSLGAETGMLCFRHK TKHARFRIGIPAVLIIQLLIGINILLSDISF >gi|224461045|gb|GG657759.1| GENE 542 544279 - 545238 1274 319 aa, chain + ## HITS:1 COG:BH1857 KEGG:ns NR:ns ## COG: BH1857 COG0524 # Protein_GI_number: 15614420 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Bacillus halodurans # 7 317 5 313 319 197 34.0 2e-50 MDKIYDVTALGEMLIDFTLNGQSSQGNNMFEACPGGAPCNVLAMLNKLGRKTAFIGKVGQ DQFGRLLKDTIDELGIETKGLVLDEQIHTTLAFVHTFPDGDREFSFYRKPGADMMLTEEE VDYGLIRQSKVFHFGTLSMTDEPVMSATKKALETAKEAGCLISFDPNLRPPLWESLDKAK EAMEFGFRYCDILKISDNEIQFVSGKEDYDEGILYLKEKYKIPLIFLTMGKDGSRAYYKG TRVERKGFRVKAIETTGAGDTFCGCAIGGILDHGLDMLTESQLGNILTYANAGAALITMK KGAIRSMPEPAEIEALLHK >gi|224461045|gb|GG657759.1| GENE 543 545274 - 546599 1335 441 aa, chain + ## HITS:1 COG:SA1708 KEGG:ns NR:ns ## COG: SA1708 COG0769 # Protein_GI_number: 15927466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Staphylococcus aureus N315 # 3 436 6 430 437 255 34.0 2e-67 MLAVWAAKITEKISVHIFHRQGVTWAGKIALRICPSVLKELSGQVRKGIFIVCGTNGKTT TNNMLCAALQAEGNKVICNHTGSNMLNGVVAAFVLGAGNSGRLDADYACIEVDEASTRKV FPHFKPDYMVLTNLFRDQLDRYGEIDITMNILKEVMRTAPEMKVIVNGDDALSAYLAMES GCRYVTYGISEQVVTDNSLNEIREGRFCKRCGAPLSYKFYHYSQLGDYACTECDFRRPDI QFDASEVEVGGRLAFTVEGRRISADYKGFYNVYNILAAYAAGRTAGLKLEQFNRMLETFN PENGRMERFTVGETKILLNLAKNPAGFNQNISAVMQDASRKDIIIVINDNAQDGTDVSWL WDVDFDRFKEDDVNSVTVSGIRCHDMGLRLKYTDILNAIQPDVEKAICERVENGCGNLYV LVNYTALFSTRNVLKRLEGER >gi|224461045|gb|GG657759.1| GENE 544 546599 - 547333 925 244 aa, chain + ## HITS:1 COG:CAC0961 KEGG:ns NR:ns ## COG: CAC0961 COG3442 # Protein_GI_number: 15894248 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Clostridium acetobutylicum # 6 240 1 238 243 216 49.0 3e-56 MDKKDMKLTIGHLYPDLLNLYGDRGNIACMMKRCAWRGIEARTVEFNTGDEIDFQDLDIV LLGGGSDREQRIVCKNLLAIQEKFKEYVEDNGVVIAVCGGYQLLGKYYKTEEGTIEGLDL VDIYTEQGEGRLIDNIVLESSVCDMPVVGFENHGGRTFINDNTPFGRVLYGAGNDGESGY EGVIYKNVIGTYLHGPLLPKNPEICDWLIQRALERRYGCAELESLDDSREKAANEYIYNR FVKQ >gi|224461045|gb|GG657759.1| GENE 545 547347 - 547700 337 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568403|ref|ZP_03777428.1| ## NR: gi|225568403|ref|ZP_03777428.1| hypothetical protein CLOHYLEM_04480 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04480 [Clostridium hylemonae DSM 15053] # 1 117 1 117 117 202 100.0 7e-51 MSFEKRLKALRLKNEMTQDYVARRLNVARSTIAGYETKNRQPSHEKLTALASLFHVSVDY LLEGEETISITPSQSVPEPVTERNFLEKYRGLSAESKRDVLKYIHLMELRDTYQADS >gi|224461045|gb|GG657759.1| GENE 546 547895 - 548356 635 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568404|ref|ZP_03777429.1| ## NR: gi|225568404|ref|ZP_03777429.1| hypothetical protein CLOHYLEM_04481 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04481 [Clostridium hylemonae DSM 15053] # 1 153 1 153 153 242 100.0 6e-63 MIIAKNDEAKRSKIWTVVTLVSSVLIVLIAVFLLTKLFTTNPLEGTWEDEDGNFVLTVKG NNSLTVNVPDLAEDYSADIKMDYVLDKDEKTVTIKMNDSEVEKAVKRSDGILTEETLENA LSSVTTTFDYSVDRDTLTLTEREYGEQMVFTKK >gi|224461045|gb|GG657759.1| GENE 547 548436 - 549491 1353 351 aa, chain + ## HITS:1 COG:CAC1797 KEGG:ns NR:ns ## COG: CAC1797 COG0821 # Protein_GI_number: 15895073 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Clostridium acetobutylicum # 1 346 1 346 349 404 59.0 1e-112 MKREETKKIKIGNVYIGGGSPVAIQSMTNTRTEDAGATVSQILKLERAGCDIIRCAVPTM EAAEALTEIKKQIHIPLVADIHFDYRLAIAAIEHGADKIRINPGNIGGEDRVRAVVEKAA EYHVPIRVGVNSGSLEKHILEKFGKVTAEGLAESAMDKVHMIERTGYSEIVVSIKSSDVL MCVKAHELIAKECPYPLHVGITESGTLLSGNIKSSIGLGLILSKGIGDTVRVSLTGSPLE EIRSARLILKTLGLRTGGIEVVSCPTCGRTRIDLIGLANKVEDMVADIPLDIKVAVMGCV VNGPGEAREADIGIAGGVGEGLLIKKGEVVKKVKEEALLETLRQELLHWDE >gi|224461045|gb|GG657759.1| GENE 548 549484 - 553947 4610 1487 aa, chain + ## HITS:1 COG:CAC3442 KEGG:ns NR:ns ## COG: CAC3442 COG2176 # Protein_GI_number: 15896683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Clostridium acetobutylicum # 182 1484 169 1450 1452 1311 51.0 0 MSKPFFEVFPTLKTDEDMKMLFSGVDVLKVTTNSDRTFIKVHILSRHLLQKKRIYEMEKM LKDQLFGHSRISTELVERYELSAQYTPENLMNEYLESMILELNTRSVVERSMLQSARYSF EDGNILCLELTDTIVAKGKKESLTSYLEKVFADRFGRRVEVRVVYEEAKDSKLKYNDVKI RQEVEAILEQTAAVHQEKAEQKKAAEEKKETPAKPGRQEKRDKYAFGSYRKPSDDPSLIW GRNFDDETIELEQVAGEMGEITIRGKVISFDTREIRNEKTIVMYAVTDFTDTITVKMFVR NEQLPDILGDIKKGAFLKIKGVTTIDKFDGELTIGSVTGIKKIADFTESRKDTAPEKRVE LHCHSKMSDMDGVTEVKDLVKRAHDWGHKAIAITDHGVVQAFPDANHYIETLDKDDPFKV IYGVEGYLVDDLTDVAVNEKGQTLDDTFVVFDLETTGFSSIKDKIIEIGAVKVEGGRITE KFSTFVDPKIPIPFRITQLTGITDQMVMDAPEIEAALPAFLEFAGDAALVAHNAGFDVGF IDQNCRYMDITPDFTAVDTVAMSRILLPTLSKFKLNVVAKALNISLENHHRAVDDAGATA EIFVRFVDMLKERGIHTLARLNQFGSSNANAIRKLPSFHVIILAKNETGRVNLYKLISKS HLDYFGRQPRIPKSELSRHREGLIVGSACEAGELYQAILDDKSQERIARIVNFYDYLEIQ PLGNNKFMIASERISKIHSEEDLKNVNRTIVKLGEKFRKPVVATCDVHFMDPEDEVYRRI IMAGKGFTDADEQAPLYLRTTDEMLAEFEYLGSAKAREVVIDNPNKIADSVERISPVRPD KCPPVIPDSDQMLRDICYNKARSMYGDELPEVVTERLERELNSIISNGFAVMYIIAQKLV WKSNEDGYLVGSRGSVGSSFVATMAGITEVNPLSPHYYCRSCHYSDFDSGDVRAYAGGCG WDMPDKVCPVCGEKLVKDGFDIPFETFLGFKGNKEPDIDLNFSGDYQSNAHKYTEVIFGD GQTFRAGTIGTLADKTAFGYVKNYFEERGQRKRNCEIDRIVQGCTGIRRSTGQHPGGIIV LPLGEDINSFTPVQHPANDMTTDIVTTHFDYHSIDHNLLKLDILGHDDPTMIKTLEEFIS SPAMENEYNETDNRFDATKIPLDDRGVMSLFHDTSALGIKPDDIGGCPVGCLGIPEFGTE FVVQMVVDTKPQTLSDLIRISGLSHGTDVWLNNAQELIRSGKATISTAICTRDDIMTYLI NKGMDSELSFTIMEKVRKGKGLTPEFEKAMKEADVPDWYIWSCKQIKYMFPKAHAAAYVM MAYRIAYCKINYPLAYYGAYFGIRADAFSYELMCQGKEKLKFYIEDYKRRSDSLSKKEQD TMKDMRIVQEMYARGYEFMPLDIYKAKASKFQIVDGRLMPPLSSIDGMGDKAAEAVEEAA KDGPYLSRDDFRQRTKVSKTVIDYMADMGLFGDIPESNQLSLFDLSM >gi|224461045|gb|GG657759.1| GENE 549 553992 - 554858 676 288 aa, chain + ## HITS:1 COG:SA0684 KEGG:ns NR:ns ## COG: SA0684 COG0697 # Protein_GI_number: 15926406 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Staphylococcus aureus N315 # 6 280 4 276 288 202 46.0 8e-52 MSGKQKYKGILYIVCSAFCFSLMNMFVRLSGDLPSVQKSFFRNLVAFFFALIMIRREAVP LRCRAGNLKYLLLRSLFGTVGILCNFYAVDHLVLADASMLNKMSPFFVVVFSIFILKERV TVPHMLFVGGAFAGSLFVIKPSFSNMDLLPSLIGLAGGLGAGAAYTFVRKLSLRGEKGPL IVCFFSAFSCLATLPFLIYGYEPMSLRQIVLLLFAGLAAAGGQFGITAAYSHAPAREISV YDYSQIMFSALLGLLVFGQVPDALSWLGYAVICTMAVLMFFYNLKREK >gi|224461045|gb|GG657759.1| GENE 550 554914 - 555411 304 165 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568408|ref|ZP_03777433.1| ## NR: gi|225568408|ref|ZP_03777433.1| hypothetical protein CLOHYLEM_04485 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04485 [Clostridium hylemonae DSM 15053] # 22 165 1 144 144 274 99.0 1e-72 MKLRCCHENRPPACCPPGPPPVPEDRPDFFAQFGVYGSPESGSSLPFIQLFKEGEGIRLD GDTDILLEPGWLYLVNYLFLATPEPDGFMQIIPRINGSLRGLYSFFAPTGAEKNTSAAGS FTTNEAAASEARLSFHLTYPSTTRNIDISGAVSVTPLIRIKNSGS >gi|224461045|gb|GG657759.1| GENE 551 555704 - 557035 1718 443 aa, chain + ## HITS:1 COG:FN1480 KEGG:ns NR:ns ## COG: FN1480 COG2239 # Protein_GI_number: 19704812 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Fusobacterium nucleatum # 8 443 12 449 449 400 47.0 1e-111 MIRNTLKELLDAKKYREIHGMLDAYNPVDLAELLMELDDSELAVVFRMIDKEKAAEVFSY MDDDQRQTLLEGFTSQEISYILDTMYTDDAVDFLEDMPANVVTKLLEHVSGETRADINRL LKYPEDSAGSIMTVEYVELSPEMTVGQALAKIRRVGIESETVYTCYVVERKKLIGIVTAK ALMTNAESVRIAGLMQDNFISVQTTDDQEDAAKLFRKYGLIAIPVLDHEERLVGIVTFDD AIGVLTDETTEDMHKMAAMTANEESYLKTGVFQHARNRIGWLLFLMFSATITGTIITHYE AAIASVPLLVSFIPMLTDTGGNCGSQSSTLVIRGLAVDELHFSDLFTVVWKEFRVSLVVG TALAAANGIRIYVMHRDLGLAAVIGVSLIGTIIVAKMVGCMLPIFAKQLRLDPAIMAAPL ITTIVDTCSIIIFFKIATMVFHL >gi|224461045|gb|GG657759.1| GENE 552 557060 - 557971 1002 303 aa, chain + ## HITS:1 COG:lin0464 KEGG:ns NR:ns ## COG: lin0464 COG2378 # Protein_GI_number: 16799540 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Listeria innocua # 1 288 1 297 310 169 34.0 7e-42 MKIDRLIGILSVLLQQEKVTAPYLADKFEVSRRTVNRDIEDLCKAGIPLVTTQGSGGGIS IMEGYKLEKTLLTSAEMQAILTGLKSLDSVAGTSRYRQLMEKLDVRSTTLASNSHILIDL SSYYKTTLAPKIEMIQDAIENRRYITFHYYAPKGESVRKIEPCLLVFQWSSWYVRGYCTD REDHRLFKLNRMLELKVLPEQFPEREEEPYELNADSAYDRQIPVKAVFVPEMRWRLIEEY GADSFTELEDGRLLFQFDFADEENIFSWILSFADKVELLEPARLRARLLNIAEGIRSKYK DRQ >gi|224461045|gb|GG657759.1| GENE 553 558116 - 558595 572 159 aa, chain + ## HITS:1 COG:STM0699 KEGG:ns NR:ns ## COG: STM0699 COG3467 # Protein_GI_number: 16764069 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Salmonella typhimurium LT2 # 1 155 1 155 161 138 40.0 5e-33 MRRPKREIKDMAEICTVIGECSVCRLGLNDKGNVYIVPMNFGYTCEDRKLTFYLHSAKVG RKIEVLKENPDVCVELDCRHGLMSADKPCGHSYLFASLIGSGKACLEEDADEKRKALQVI MKHQTGRDFTDFDEKWVNAVAVIKVELDAYTCKHHDGSN >gi|224461045|gb|GG657759.1| GENE 554 558613 - 559353 656 246 aa, chain + ## HITS:1 COG:no KEGG:Ccel_1063 NR:ns ## KEGG: Ccel_1063 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 116 239 10 130 134 85 34.0 2e-15 MWILTGLFAVLSIVLLSGRGSFLIAGYNTADKEEKAKYDEKKLCRVMGAGMAVITAILLL CTLYEFDLPRGLRWILPAGIFGVVIFLVIATNTICRARTPAAGTKERKKAALTTKVTVAV LAVTCILVVSVLYTGDVKVQFEKDYMNIHTSVIGSKKVGYEEILSVAYEDSMDIGRRTGG IGSFRLQAGSFKNSEFGAYHLYSYTDCSEYVVLETADGYLVVNGKTPSKTRNLYHDISER AGFFAN >gi|224461045|gb|GG657759.1| GENE 555 559421 - 560731 1615 436 aa, chain + ## HITS:1 COG:AF2013 KEGG:ns NR:ns ## COG: AF2013 COG1541 # Protein_GI_number: 11499595 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Archaeoglobus fulgidus # 1 434 10 439 440 428 48.0 1e-120 MIWAKEETLPRDEIEGIQLEKLKETVRYIYEKSAPYRRKMDEAGVRPDDIGSLTDLQKLP FTYKADFRDNYPMGLFAVDKKELVRFHASSGTTGKPTVVGYTKKDLDVWLNNVARIACMG GATPDDVAQIAFGYGTFTGALGLHGGLEKLGASVIPMSSGNTKKQIMFMQDMGTTLLVAT PSYALHLGEEIRARGLDPSKDLKVHIGLFGGEGMTEPMRDEMHKVWGEQFLCTQNYGMSE LCGPGVAGECESLCGMHVNEDWFIPEVIDPETGDVLPPGEHGELVVTCLGKEALPLVRYR TGDLTKLMYEPCACGRTTVRMENLSGRADDMLVIRGVNVFPTQIEEVLLQVPEIGPHYEI VVERKNRLDVMTITVELIDDRLLDSYSKLSELEQRIKKGLKAQLGLATQIKLVAPYSLQR FEGKAKRVTDMRKDGL >gi|224461045|gb|GG657759.1| GENE 556 560735 - 562489 1633 584 aa, chain + ## HITS:1 COG:CAC2001 KEGG:ns NR:ns ## COG: CAC2001 COG4231 # Protein_GI_number: 15895271 # Func_class: C Energy production and conversion # Function: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits # Organism: Clostridium acetobutylicum # 6 577 2 575 584 603 50.0 1e-172 MSEGKKVIMLGNEAIARGAYEAGVKVSAAYPGTPSTEISEYLVQYKDELYCEWSPNEKVA TEVAIGASVSGVRSMACMKHVGFNVAADPAYTVSYMGVNGGMVIVVADDPGLYSSQNEQD TRMVARAAQLPVLEPSDSSEAKEYMKAAFELSEKYDRPFVFRITTRLAHSQGLVELAGRE VPEDRPYVKDVKKTVMMPGNAKLRHVEIEKRNLELAGAADTLPMNTVEMNDTKVGVITSG IPYQYVKEAMPDASVLKLGMVNPLPRKMIEDFASKVETLYIVEELDPVIEEQVKSWGIKA VGKEIFTVQGEYSANMIRRAVLGQELKTAAPKPAPMRPPILCPGCPHRSVFYVLQKLKMH AAGDIGCYTLGAVAPLSVVDTTICMGASISSLHGMEKAKGKEYIRDWVAVIGDSTFLHTG INSLMNMMYNNASGTVMILDNSTTGMTGHQDHAATGKTLQGDPAYAIDIPGLCRAVGVKN VVEVNAFDIETLEKVIKEETARDEVSVIITKSPCVLLSKAKKPVYTALEDKCRKCGMCMK PGCPAMTRNEDGTIHIDDTMCTGCGLCEDLCKFDAIESVKAGDR >gi|224461045|gb|GG657759.1| GENE 557 562489 - 563067 793 192 aa, chain + ## HITS:1 COG:CAC2000 KEGG:ns NR:ns ## COG: CAC2000 COG1014 # Protein_GI_number: 15895270 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Clostridium acetobutylicum # 1 186 1 187 192 191 50.0 6e-49 MTAKNIMIVGVGGQGTLLTSRILGGLAMALGYDVKLSEVHGMAQRGGSVVTFVRYGDKVA EPIVEEGTADIVIAFERLEAYRYAHFLKKDGALIVNDWRIDPMPVVIGAAEYPDNILEEL RKEYKVYSVNATEESRKLGNSRVFNMIVLGVAARHMDFTKEQWYEVIEKTVPPKTVDINK QAFDVGYDLESR >gi|224461045|gb|GG657759.1| GENE 558 563106 - 563525 327 139 aa, chain + ## HITS:1 COG:MTH162 KEGG:ns NR:ns ## COG: MTH162 COG4747 # Protein_GI_number: 15678190 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Methanothermobacter thermautotrophicus # 2 134 3 135 143 117 44.0 6e-27 MIRQLSVFVENKPGSLMDVTSRLTEAHINIRAVASFDTPEFGILRLVVDKPAEAKGCLTE KGFVVRLHDVIGAELEDKKGNLNQMLAILAEGRINVNYIYSFVIREGKAPVLVFSTDDYE RAAQILKDAGVKIVEESDL >gi|224461045|gb|GG657759.1| GENE 559 563550 - 564881 1683 443 aa, chain + ## HITS:1 COG:MTH1855 KEGG:ns NR:ns ## COG: MTH1855 COG1541 # Protein_GI_number: 15679843 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Methanothermobacter thermautotrophicus # 13 441 2 430 433 460 52.0 1e-129 MAGVALKDWKEQIRDPKTECMGRDEMTALQSERLVKQVKNVYENVEFYRKKMDDLGVEPG DIKGIEDIGKLPFTTKEDLRDNYPFGLLAVPQEKIARVQGTSGTTGKLTLASYTQNDVDV WGECVARGLTMAGLTAADRLHVCYGYGLFTGGMGLDLGAKALGAMAIPMSSGNTKRQLMC MEDFGATAFACTPSYALYLAEAAEEAGIVDRLQIKASINGAEPWTDEMRKKIESILHINS FDIYGLCEITGPGVAMDCIHHKGLHVYEDYFYPEILNPGDNTSCADGETGELVFTTLAKE GMPLIRYRTKDLTSIEYSTCECGRTLPRIQKFTGRTDDMKVIRGVNVFPTQVETALLSIG GGVAPHYLMIVERENNLDVLTVMVEVDERYFSDEIRKLDELKNKVGAALKQALGVSARVK LVEPKTIERSEGKAKRVIDKRDL >gi|224461045|gb|GG657759.1| GENE 560 564899 - 565342 568 147 aa, chain + ## HITS:1 COG:MTH1854 KEGG:ns NR:ns ## COG: MTH1854 COG4747 # Protein_GI_number: 15679842 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Methanothermobacter thermautotrophicus # 7 141 3 139 143 107 41.0 1e-23 MGMSNTVQQLSVFLENREGRLDEVLAILAEGGVNIVALSLADTSDYGMLRMIVSDPHKGR AVLKQAEITAMLTDVVALRVPHATGSLSKAMHQIVEGEVNIEYMYAFANGSDAAAVLKSD DPARVIDILKGSGFDVYSADEAYRANM >gi|224461045|gb|GG657759.1| GENE 561 565487 - 565687 298 66 aa, chain - ## HITS:1 COG:CAC2990 KEGG:ns NR:ns ## COG: CAC2990 COG1278 # Protein_GI_number: 15896242 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Clostridium acetobutylicum # 4 65 3 64 65 86 74.0 1e-17 MNRGTVKWFNNQKGYGFISDETGNDVFVHYSGLNMDGFKSLEEGQEVEFEVTEGSKGPQA VNVTRV >gi|224461045|gb|GG657759.1| GENE 562 566052 - 568058 2091 668 aa, chain + ## HITS:1 COG:aq_708 KEGG:ns NR:ns ## COG: aq_708 COG0145 # Protein_GI_number: 15606108 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase A/acetone carboxylase, beta subunit # Organism: Aquifex aeolicus # 1 666 1 658 660 454 41.0 1e-127 MSYRLAADVGGTFTDVVMVDDETGILKTTKVLTTPQALEAGMLKGFDELTSGKYEEITSI VHGTTSGLNSVIERRGAHCALITTKGFRDVYEIARANRPEIYNNHYRKPEPLIPRRDIYE IEERTTYAGEVEKEVTYETVKELIPRLEGQYEAIAVCLINSYINTENEQKVCRILKENLN GEVIVTASHEIARESREYERVSTAVLNAYVAPSTRHHVHALTEELRKRGFKGTLYMMQSS GGVIRAEMAAVRAVQTLMSGPVGGAIGAGAIRRENIIGFDIGGTSFDVSLVVNGKIETAV EAEMEGFPILAPTVNVFSIGAGGGSIAWEEAGGMRVGPQSAGAAPGPVCYDKGGTEPTIT DADLVLGHLSPGHFLGGRMKINEYKTKEIFAAYGEKFGLDMVTAGEGVCTIANHKMADAI RELTVRRGIDPRKFSILAFGGAGPMHAALIAGELDIKEVIVPANPGVFSAWGMLQADIRH DAAVTSLCLLNRLKEEEFEQNFECLKEELQEVLEKEGIGRRKKQYICSLDMRYFGQEYTI SVDIPEGRGCCRDDIEEQFNSIYERLYGHHSPDDMIEVVNYRMTVIVPVKKSPAAGKAGE GSADIIDRLPGYFDGVRYDMNVYAREQLVAGSRIEGPAIIAELTSTTVVPPKWKLTVDEA DSMIITRV >gi|224461045|gb|GG657759.1| GENE 563 568071 - 569744 1577 557 aa, chain + ## HITS:1 COG:SSO1662 KEGG:ns NR:ns ## COG: SSO1662 COG0146 # Protein_GI_number: 15898479 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase B/acetone carboxylase, alpha subunit # Organism: Sulfolobus solfataricus # 5 554 2 552 583 314 35.0 3e-85 MGAKVSPIVVEIIRNAVNSAAREMNSCLIKSAFGPGIYEMKDCSVGIFNRDARLLGQSSG LPIFLGNLEICINIVTERIGVCGYREGDVFVMNEPYLQGTHVADVTVLAPIFYRGELHGF TAVRAAMQDMGGKDPIGNADSTDVYQEGLRIPPVRLCSEGKVCEDVMEIIAINSRYHTMM KGDLNACIAACHTGKTRMNELYERYGTDVIEEAAKEIFRQSEELDRKAVADIPDGVYEAE GYLDNDGLTDEPRRLKVKICIQGEVMKIDLSGSSRMGSGPINCGRAQTIAACRVGYKQII NPKSQVSGGTFQNLEVVVEKGTFLAAEEPAPCGWYFTGLGLLIDLIGKALSPVMEKEAAA AHYGDSSLIIFRGYDSARNKTFGICEATSGGWGAFAEGDGQDCMINVVNGDLKNWSVEFI EDKFPLRLLSYEIRTDSQGPGKWRGGAGVIRTYRVETEGECRLMLWIERTKTTAWGLFGG GSGQAPAAVVNPGTPDERVYLKTNTLSLKKGDIVQIRTGGGGGYGDPLERDRKAVREDIE NGYITAEHAEKYYGYEA >gi|224461045|gb|GG657759.1| GENE 564 569783 - 571366 1507 527 aa, chain + ## HITS:1 COG:mlr6670 KEGG:ns NR:ns ## COG: mlr6670 COG0747 # Protein_GI_number: 13475567 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mesorhizobium loti # 70 512 59 499 513 204 31.0 4e-52 MRRVLVLAMAAVLTCSLCACGGDKKRSGKEGKADTNDDKTFVAALAFMPDSIDPTNLMNA ADMHATRNCYEPLVEEVRGTTDLEPWLAEKWDIPDAKTYIFHIRDGVKFYDGTDLNAEAV VYSFERARAFVNSVSSCVEEIDTIEAVDDMTVKMTLKAENSGFLYNVAKIGIISPAFCKE NEEDGDWAQKYLKKHSCGTGAYQVTDYVDDQYVTLSRFDDYWQGWKDDQIDVVQTLIVKD NATQIQMLNSGEVDKLQIPLTENLDMLEKNPDIDILKGGSLQTNIFTFNMKKAPFDDPKV RQAVSCAFDYEGVKNTVYNGQATVPSGFMPADFAEHDPDLPEQKQDMERAKQLMEESGAG ACEIRVHLCEGSDDQVQMAQILQADLAEIGITVKIEIMPWTSLVEENTSPETAPEMSALN MGAFTGDAAFFLKQNFHSINSGGSYNWSFYEKPEFDKLLDDAAATVDEGEKTKLLKQAQQ MLVDDCPAVFAASPNTVEAINNTYRGYVLHPLDYFYSIRFYQLTVGE >gi|224461045|gb|GG657759.1| GENE 565 571391 - 572398 263 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 65 330 43 310 320 105 25 8e-21 MAKFLLKRFASLVLVIIGVTMLVFLATYYLPSDPARAAAGPSATNEQVEAKRVELGLDKP IYVQYLEYMKGLLRLDMGTSFKTKQPVAQEISSRLSATLELTAVSLIVFFVLALILGSVA ALKRGGVLDGMIRFFSVAGMAVPPYWLALIFQYVFYYRLQWLPAGYRLPVGTMPPEPVTG FYLLDSAFAGDWALLLQAARHLLLPVLSLVLGYCGITTRMMRTQLLQELRQDYIRTARSK GLPEHTVIRRHAMKNAISPILTLLGMQAGGMIGGTVLIEKIFSWPGLGSYALDAIASLDL MVVAGITLTMAVIFILINLLVDISYVLIDPRVRLS >gi|224461045|gb|GG657759.1| GENE 566 572398 - 573231 1072 277 aa, chain + ## HITS:1 COG:PAB0093 KEGG:ns NR:ns ## COG: PAB0093 COG1173 # Protein_GI_number: 14520362 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Pyrococcus abyssi # 8 273 19 284 287 209 41.0 4e-54 MKKIKKYFFRDTPSVIGTLISVMIILFMLTGPFIARYKPLVVDTGAKLVAPGSIHWFGTD EMGRDLFSRMAYGSWYSMGTALAVVLCAAAAGIMIGGIAGYIGGWFDNLVMRICDVFMSF PQIFLAMIIAAAIGAGIGPTIFALAVSWWPNYARMVRGMVIVIKEKLYVESAKAIGMHPA KIVFTIIIPQTMSMVIPQITMGIGNALIAASGFSFIGLGAQMPTPEWGAMISAGSLFIFN APWYSMIPGVFIFLSVLGFSLLGDSLQEATNPELRNL >gi|224461045|gb|GG657759.1| GENE 567 573249 - 574337 1203 362 aa, chain + ## HITS:1 COG:PAB1781 KEGG:ns NR:ns ## COG: PAB1781 COG0006 # Protein_GI_number: 14521082 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Pyrococcus abyssi # 6 361 2 355 355 216 34.0 7e-56 MDIKKRIEDARTVMRQKQLDCLILSPSADLYYMTGLSPIAVERPVFLIVLREEAYVILPA FEADDLREEVKEQISCIFWQETEDPYRKAAACVGGGSIRIAAGDAMPNVMAYRLARQIKA ASWSLGSEVMEELRARKDAAELKYLMTAQEKSEAALLRTLEQGLEGFTEREVAQRLKGYL EEEGLSCRGLPLVAAGQNGAVPHHQAADCRICFQDAVVIDFGGSYEGYFSDITRTVAVGK PPEGFEEIYGTVRAANEAAFQAAAPGITCGCLDEAARQVIREAGYGGFFTHRLGHGIGLD IHEPPYIVAGSRKQIEPGNVFSNEPGIYLPGRFGIRLEDDLYIGQKEAECLTGLGHELLV VD >gi|224461045|gb|GG657759.1| GENE 568 574354 - 575334 598 326 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 22 321 35 327 329 234 39 1e-59 MGVTLLNVEGLVTEFYGEGRTVRAIDHVSFHVDKGEILGVIGESGCGKSVTSMSVMRLIP ENLGRVAEGRITFEDRNILKMSRKEFSGITGKEISMIFQEPLSSLNPLLTCGYQIVEAIR CHEAVSRKKAWKKAVGLLDMVGIPMPEKRAEEYPHQLSGGMRQRVMIAMAIACSPKLLIA DEPTTALDVTIQAQILDIIRRLREELGMAVMFITHDMGVIAEVADRVMVMYAGSIVEEAP VKQFFANPLHPYSMGLLKAVPRPDEKKERLFMIEGTVPKLSEEIIGCRFCGRCGCAADIC TEQKPPLVDAGQGQKVLCWQYAMEGR >gi|224461045|gb|GG657759.1| GENE 569 575340 - 576332 890 330 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 13 326 11 324 329 347 53 1e-93 MTDQKNGQENAPLLKVNHVSKYYSAKAGAFSRDKRVVKAVEDISFDVYPGETLGIVGESG CGKTTLGKLVLHLFEPTKGEVLFGGQDVLRLKGRQLREFRKHAQIVYQDPYTSLNPRNTI GRTIAEPLLVQKLADKKQTEESVLRMLEVVGLSSDYYDRYPFECSGGQRQRVGIARALIL NPKLIVCDEAVSALDVSTQSQIINLLDDIQKEFNLTYLFISHGLSVVRHMCSRVMVMYLG RVVEIAGCEELYRHPRHPYTEALFSAIPLPDPEIKKDRIILEGDVPNPVNVPSGCAFHTR CKYAHERCKNETPQMRETGNGHSVACHQIK >gi|224461045|gb|GG657759.1| GENE 570 576351 - 576836 503 161 aa, chain + ## HITS:1 COG:no KEGG:Amet_4120 NR:ns ## KEGG: Amet_4120 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 16 161 20 166 168 118 42.0 8e-26 MSGERMGRERETEINRNAIGHRAAWMGLIYDEAVKAGIDIEEVMRRAIARRGEQDGKKFR AKCEDITDLASFRKVFLDELGMNTFDMEVEECSAQDLKIQFHHCPLLAAWKDLGMDDAQC AKLCDIAMDGDRSIAGAMGLKFDLNGAIADGCATCSLHFHK >gi|224461045|gb|GG657759.1| GENE 571 576952 - 577602 684 216 aa, chain + ## HITS:1 COG:mlr7177 KEGG:ns NR:ns ## COG: mlr7177 COG1802 # Protein_GI_number: 13475978 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 3 203 41 244 264 80 29.0 3e-15 MSGNIKLKDQIYENILNEIIDGNYRQNDIITERELIEKYGVSKSPVREALVELCNEKILE SRPRMGYQICPISIKEISDIVELRIILETAALEKTFARLKDGQIELLKKDVTEATKLHSE KKIARYWKSNISFHLLLCSFCGNEKICEAVERALKFSSRSAVQYYFSSSVHRNETTAQRH ILLIEALEKRNLEEAKEVLKDDIMDLKREIVEGIIA >gi|224461045|gb|GG657759.1| GENE 572 578021 - 578215 140 64 aa, chain + ## HITS:1 COG:no KEGG:CLOST_2283 NR:ns ## KEGG: CLOST_2283 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 2 54 8 60 568 80 58.0 3e-14 MKGYISIREASYKWDVSERRVNQYCTQGRIPGAERFGRSWAIPEDAQKPKDPRKSAARNR SYGT >gi|224461045|gb|GG657759.1| GENE 573 578233 - 579138 458 301 aa, chain + ## HITS:1 COG:CAC3409 KEGG:ns NR:ns ## COG: CAC3409 COG0583 # Protein_GI_number: 15896650 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 143 23 165 319 96 36.0 6e-20 MLLRQMKYFTAIVECNSFTEAAEQCYISQSAISQQIQALEKELGVVLLRRENRRFSLTPA GEYFYHQSKVLLDEANELRRETIRIGQADESRLRIGYLKNYSGQELHIAVAEFSKLYPEI SINIVAGTHEELYDLIRFGGVDVILSDQRRAFSDDYENKVLLECDCFAEISSNNHLSAKD HLTLTDLKRTPCILIAPPEQHDEEAGYYRDTLGFGGNFLYAENLEEGRLMALGNRGFLPL ENVGTLPPVVPTIQRIPLYRGDKPLRRKICAFWLKKCTNYYIEEFAETLHHLIEQSRQEI D >gi|224461045|gb|GG657759.1| GENE 574 579311 - 579814 423 167 aa, chain + ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 2 166 8 172 179 212 59.0 2e-55 MKTLIAYFSRKGNNYVGGSIVNLPVGNTEVAAKKIAALTGGDLFEIKTVHSYSEDYTACT EEAQQELQAKARPELASDIPDISAYDVVYLGYPNWWGTAPMGVFTFLENADFYGKTIKPF CTHEGSGMGRSETDIKKACPSAKVDKGLAIRGGGVSRADKDIESWVR >gi|224461045|gb|GG657759.1| GENE 575 579843 - 580598 652 251 aa, chain + ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 1 246 1 246 250 282 50.0 4e-76 MSITVASKKYHEKMFPGYRSSFLETDPEFIERFDNFAFDEVVNQDDLDDKTRFMAILATL LGCQGMDEFRAMLPAAMNFGVTPVEVKEIVYQAVDYLGIGRVFPFLKITNEVLAEQGVEL PLPGQATTTTENRLEAGEKAQMDIMGDGMRGFWKSGPEESRHINTWLTDNCFGDYYTRTG LTYQQREMITFCFLSAQGGCEPQLTSHAGANMRIGNDKAFLIKVISQCIPYIGYPRCLNA LHCVNEAEKKV >gi|224461045|gb|GG657759.1| GENE 576 580609 - 581598 727 329 aa, chain + ## HITS:1 COG:YPO2806 KEGG:ns NR:ns ## COG: YPO2806 COG0667 # Protein_GI_number: 16123004 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 1 329 1 329 329 380 59.0 1e-105 MKKRILGKSGLAVSAIGLGCMGLSQSYPPFPDRNESIVLIRRAIEMGENFFDTSELYAVY QNEELVGEALEPFRDQVVIATKFGWNIQGGKVLGLDSSPAAIRKAVDGSLKRLRTDHIDL YYQHRVDPKVPIEEVAETMKELKKEGKILYWGLSEASVETIRRAHAVFPVTAVQNEYSMW YRQPEQELLPVLEELGIGLVAFSPLGKGFLTGAVTKDAVFAENDIRHSIPRFNDPDNLAA NQKLAQALSDFAKERELAPAQIALSWLLYQKPWIVPIPGTKKADRLQENMSAAYVELTET DRNKLNEMLAGIEIVGARYSAAQESMTNR >gi|224461045|gb|GG657759.1| GENE 577 581612 - 582442 913 276 aa, chain + ## HITS:1 COG:RSc0215 KEGG:ns NR:ns ## COG: RSc0215 COG1028 # Protein_GI_number: 17544934 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 272 1 272 275 291 56.0 8e-79 MKKVLLLTGAGQIGMAIARRMGYGMKIVLGDKNPENAQAIAKVMTDAGFDTAAMEMDLSS RDSIKAMIAEAQKYGDIQMLVNAAGVSPSQAPIEAILKVDLYGTAVLLEEVGKVIAPGGA GVTISSQSGHRMAQLTAQQDALLAITPTEELLRLEMLQPENIRDTLHAYQMAKRCNEKRV MSEAVKWGERGARLNSISPGIVVTPLALDELGGPRGDFYKNMFAKCPAGRPGTADEIANV AELLMSDKGAFITGADFLIDGGATASYFYGPLKPEA >gi|224461045|gb|GG657759.1| GENE 578 582529 - 583353 759 274 aa, chain + ## HITS:1 COG:mlr1899 KEGG:ns NR:ns ## COG: mlr1899 COG1028 # Protein_GI_number: 13471804 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 1 273 1 276 278 245 50.0 7e-65 MSRTWLITGVSSGFGFEMTKQLLEVGDTVVGTVRNTKKVEELIVQYPDAFDCRILDVTDV PAIHRLVADAFQKHERIDVVVSNAGYGLFGCAEELSDEEINHIIATNLTGSIMLIRDSLP HLRAQGGGRIIQMSTYGGQVAYPANSMYHATKFGIEGFCEAVAQEVAQFGIGVTLVEPGG ARTEFRYGSAKVAKLMPEYESCHGFLNMLDASKGLAPGDPAKMAQRIIESVEKTPAPLRM VLGSQALGATIDRLEERVADYKTQTELAASTDII >gi|224461045|gb|GG657759.1| GENE 579 583426 - 584172 565 248 aa, chain + ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 73 247 5 178 179 189 52.0 4e-48 MKKIFTALLAVMMLFTLAACGSTNTGGESASTSTPQSSTPESTAAPDSTPSESTETSQPS ESEDIQPAEEESDSTRILIAYFSRAGENYNVGVIEKGNTAIIAEMIGEQTGGDLFHIETV TPYPENYRECTNVAQQELRDNARPELKATVDNFEDYDVVFLGYPNWWGDMPMAVYTFLES YDFSGKTVVPFATHEGSGLASTESSIASACSGAEVLGGLAIRGSVAQNSQAEANESVVNW LREAGFID >gi|224461045|gb|GG657759.1| GENE 580 584195 - 584863 503 222 aa, chain + ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 63 219 5 175 179 197 53.0 1e-50 MKRILSAVLMLTLAFSLAACSNNTQPEETPNSTQSEGNTSPSSESTSGSETVEPDSTDDP ASSEGNVLIAYFSKTGNTETIANMIAGQTGGELFKVETVTPYPEDYDETVDIAREEQDND ARPELSTHVDDMSQYDIIYLGYPNWWGTMPQAMFTFLEEYDFSGKTIVPFCTHGGSALGR SEGDIATLVPGATLLDGLAVSGSRVDDAQADVEEWLNSLELE >gi|224461045|gb|GG657759.1| GENE 581 584868 - 585791 649 307 aa, chain + ## HITS:1 COG:RSc0630 KEGG:ns NR:ns ## COG: RSc0630 COG4925 # Protein_GI_number: 17545349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 63 174 3 114 118 91 41.0 2e-18 MKLHKKIVSILSMILVVTLSACSGGTGNEESSSAPQNLEQSEITSEVPTELESEAFDLGG PLVRLTFEGGEAMVRLNDNAAAQSFAAQLPMTQTFEDFNSIEKICRLQEELTTEGVESGV DPAVADITLYVPWNTLVFYYEDYGFNDDLIPMGRVESGMELLTAMGDEFEVTMDLADENK AEAAEPSAETTEISLTAGDTVITATLDNSETTQAFLATLPRTLTMNHYGGREYYGRIEAL PENGEAIADFENGDVTYYPAGPSFAIFFAGADSSSQGGLIRMGKITSDLSVFGTLGDSVE MRIELAE >gi|224461045|gb|GG657759.1| GENE 582 585810 - 586499 609 229 aa, chain + ## HITS:1 COG:no KEGG:Mbar_A0780 NR:ns ## KEGG: Mbar_A0780 # Name: not_defined # Def: hypothetical protein # Organism: M.barkeri # Pathway: not_defined # 1 223 1 222 231 154 37.0 2e-36 MTGKRKFQIFVDFAMAALLPVLMAYSLLGEAVHEWVGVAMFSLFLFHNALNWKWYKNLFG GRHSSVRLLGTAVNILILLLMLSLMASGIVMSRYAFQFLAIEGGASLARTVHLAASYWCY VLTSVHLGLHGGMFLGMLRKAFHMEKASQKRRVVLRIVAVLLSAYGIYAFIQRGLIGYML LQIQFVFFDFSEPLVFFFLDYLAVMALFTLLGYYAAKLLAKVKSNPKKP >gi|224461045|gb|GG657759.1| GENE 583 586560 - 587672 831 370 aa, chain + ## HITS:1 COG:MA0367 KEGG:ns NR:ns ## COG: MA0367 COG2768 # Protein_GI_number: 20089264 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S center protein # Organism: Methanosarcina acetivorans str.C2A # 1 369 1 354 355 317 47.0 2e-86 MKKRFLLILMALSMLTFLFTGCGSTGGSQELSAPSESAAASSAPATEEPTPSQGDSTMKN TLITNSGAEISLSSLEHYTEAENAPVVYYLSEISPEAMVKIYNALQWSPTGKVAVKLSTG EPPASNYLRPELIRDLVQLVDGTIVECNTAYGGSRAATAMHYQVAKDHGFTEIAEVQIQD ENGSMTLPVEGGTVLSENYVGAAFADYENYLVLSHFKGHAMAGFGGAIKNISIGLGSSEG KSWIHSGGTTRSGFGGDQDAFLEAMGDAGKSVSDYLGKGERIVYINVMNRLSVDCDCDGN PAEPDMHDIGILASTDPVALDQACIDLVYVSEGRDSLVNRIESRNGLHTLENAEAIGLGS RAYRLVELDD >gi|224461045|gb|GG657759.1| GENE 584 587665 - 588567 591 300 aa, chain + ## HITS:1 COG:MA0366 KEGG:ns NR:ns ## COG: MA0366 COG0701 # Protein_GI_number: 20089263 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanosarcina acetivorans str.C2A # 1 300 1 300 300 369 67.0 1e-102 MIDTLSREGIYLWYYFSIQLEQIFPYWILGMVLGSAVSVFLKDRIHNTFRSLGEKKLGVF GIFIASALGIASPLCMYGTIPIAASFSKSGIKDDWLAAFMMSSILLNPQLILYSAALGQT ALIVRVVSCYLGGVLAGLLVRAFYRKKSFFNFSGFDEPKSRDTDPNILLRFLKNLWRNVR ATGLYFFIGIVLSAVFQRYVPAEVMTDVFGGNEAWGVLMAATIGVPLYACGGGTIPLLQA WLWDGMSLGSAAAFMLTGPATKITNLGAVKIVLGIKRFLLYLAYVMLFALVTGLAVNLFL >gi|224461045|gb|GG657759.1| GENE 585 588625 - 589338 163 237 aa, chain + ## HITS:1 COG:BH1808 KEGG:ns NR:ns ## COG: BH1808 COG0745 # Protein_GI_number: 15614371 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 137 235 132 229 231 77 44.0 3e-14 MNNTVLAIGYSANDQDKERTYWKNYDIELDFASDISSAVEKLRHTNYIRISICSGELSHA FLELLRSSQAILWKFVIFDISENGRQADERFFIQLNEGKKEEWLQSVLEGQTNSVILTHS PGFSRMPGFENDAIQPLTEIREGALYFCWEQRLVSVHGQIIELAAKEFDILALLISHPRR VFTYEMIMDLVWKEDYTYYSRKAVNNHVSNLRKKLKVAPDVPDYIKSVHSVGYKFMP >gi|224461045|gb|GG657759.1| GENE 586 589400 - 589909 -15 169 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1761 NR:ns ## KEGG: CDR20291_1761 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 31 148 3 120 132 145 66.0 6e-34 MNFCRKGASFCPQNVRNSRRTFFCPSGKEANKISERIPVMNYPQYRRARKLVRECCNYVG GNCIALDDGEECVCIQSISCSLLCKWFQAAVLPLDKGLETALLFREEMKRCAVCSQPFLP GSNRAKYCKSCAAKAHRQQKAASERRRRASRDSPPEKGDDHGLLEAEKP >gi|224461045|gb|GG657759.1| GENE 587 590031 - 590483 -166 150 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGFQNAAKQTVWRFHFAAFRARQSRRSGSPNADGNKREISQREDRKIINQINPIDGKDGI MHSNLSPLKNDTPMPPICRFPASSFLWVFQMTQSCSTPCCWTVRVSPRETAIWIKTGPYA STSLWRKRRTSFSEAARWRRGPFKNWSGAA >gi|224461045|gb|GG657759.1| GENE 588 590568 - 590798 186 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568448|ref|ZP_03777473.1| ## NR: gi|225568448|ref|ZP_03777473.1| hypothetical protein CLOHYLEM_04525 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04525 [Clostridium hylemonae DSM 15053] # 1 76 1 76 76 137 100.0 3e-31 MPDKKELLGKLDPAAMERVSRYYRDGAFEFGLDTEGHTVREGNTVYHILPRFAEPGAESV VSKLRRIMERELKENE >gi|224461045|gb|GG657759.1| GENE 589 590890 - 592530 969 546 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 1 298 1 301 301 338 54.0 1e-92 MNQQPDKITALYCRLSQDDALDGESNSITNQKALLSKYAADHGFKNTVFFVDDGYSGTNF NRPGFQEMMKHVEDYGVSALIVKDLSRLGREYSYMGRLQDFIFPAYDVRFIAINDDVDSA KGENDFAVFKNVFNDYYAKDTSKKIRAVVKLRGEAGEHIASNPPYGYVKDPLDKKKWVVD GEAANVVRRIFDLCISGKGPMQIAKLLTADRVLTVTAYNARQKGWAMPDNLCHWTSNAVV KILERREYIGCTVNFKTYTKSLKFKKRMENPIENQRVFEGTQPAIIERGQWERVQALRAN KRRPAKTGKTSIFSGLVRCADCGAKLYFCTCNTYKDDSQDHFVCSNYKSNTGSCQIHFIR EQVLYRLVLACIQRTLTYVRMFREDFTQEMLAQDEASRRAELERKQKALTGAHKRMEELD TIIQHIYEDNVLGKLSDARYLKLSSEYEREQEEISRLAVALEREVEAESGQIADVGRFLE LVDKYIEIQELDAALLNELVSKIVVHSPEKIDGKKHITIEVYFTYVGKIRVPLQIGREAL GQAEPA >gi|224461045|gb|GG657759.1| GENE 590 592631 - 593518 771 295 aa, chain - ## HITS:1 COG:MA0617 KEGG:ns NR:ns ## COG: MA0617 COG0053 # Protein_GI_number: 20089506 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Methanosarcina acetivorans str.C2A # 10 290 26 311 331 184 38.0 2e-46 MEQCTNEQMAMRVSLITIVQNIVLSILKLAAGLLAHSGAMVSDAVHSASDVMTTFVVIAG VKLSNKASDKDHPYGHERLECVAAIVLSVILGLTGLGIGSSGIGKIRAGGSALAVPGGLA LAAAIVSIAVKEAMYWYTRAAAKKTGSGALMADAWHHRSDALSSVGSFVGILGARMGMPI LDPAASVVICVFIIKAAVDIFRDAVSKMTDRSCDDATIQALRDTVLSDKQVLNIDRLNTR IFGDKYYVELEIVADADLSLSQAHDIAERVHDAVERKFTKVKHCMVHVNPTGGHL >gi|224461045|gb|GG657759.1| GENE 591 593943 - 594374 478 143 aa, chain + ## HITS:1 COG:CAC1675 KEGG:ns NR:ns ## COG: CAC1675 COG1959 # Protein_GI_number: 15894952 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 133 1 130 139 94 36.0 4e-20 MKISTKGIYALEVVADLALHSDAAHLESLKNIAERRKLSEKYLERIVKALKDAHIIKSVR GAYGGYCMAKEPQQLTVREVLKAVEGELAPVDCLTQESSCGIDCRSCPTRDTWAALWQTI AGVADEVTVGDIVRAAEKIDKGL >gi|224461045|gb|GG657759.1| GENE 592 594459 - 596276 1254 605 aa, chain + ## HITS:1 COG:MA2414 KEGG:ns NR:ns ## COG: MA2414 COG0286 # Protein_GI_number: 20091245 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Methanosarcina acetivorans str.C2A # 267 514 63 305 420 84 25.0 5e-16 MIRADMIAAIGRKYLTSNIENDEYSYPKAFSDASLTFCPIQNSAGRKFERLDIRFVKDNI SVLVETKQNFTKADEEQLSAYVEYEKALTGNKIVAILANTKNDNVKVWRGVISDGDFMPK ETALRTMREYVDFYTSKINDKEKVMQNTYKLNELLHRHSIPEKLRSQFVGTCLLALKNDL DYSTPTITAAQIRARIKEVLEELLNSDINKAEKLALLNRNVLNGQYVRQLNIAAFREILK FIEDNILPFINDKSTSGQDLLNLFFVTFNKYVGKSDKNQAFTPDHITDFMAKITGVNKHS VVLDPCCGSGSFLVRAMTQALDDCATAAEQETIKRNQIYGIEFDENVYGLATTNMLIHSD GNSNIRQGSCFKLSDWIKEAKPNVILMNPPYNGQRIHLPEHYVKTWTKNKKEDPSKGLYF VKYIADTLNSINQQAKLAVLLPVACAIGTSGEIARLKSEILKENTLDAVFTLPNEIFYPG ASASACCMVFKIGTKHKDMTNPDTYFGYCKEDGFKKKKNLGRVEQVDTVTGKSRWVEIEK EWIELYRNRQSVDGFSATHKVDGNDEWLCEAYMKTDYTKLTEQDFQQTINDYLAYLVKEG VMYEP >gi|224461045|gb|GG657759.1| GENE 593 596266 - 597276 367 336 aa, chain + ## HITS:1 COG:no KEGG:ELI_2924 NR:ns ## KEGG: ELI_2924 # Name: not_defined # Def: putative S-CspCI # Organism: E.limosum # Pathway: not_defined # 3 331 6 344 357 145 30.0 3e-33 MNLDHKKWKEFVFDDIFYIERGSSLYITDCENGSTPYASASADNNGISHYLAVPPNRTGN CIVVNYDGSVGEAFYQAEPFFASEKIVTITLKDTELNVYIALFLVTIIKQEKFRFSYGRK WAVNSVMRRSCIKLPAGPDDLPDWDFMERYIKSLHYKPLSSSNRKDKSNALDISSWKEFA VNELFEVRYGINMELNTCIPADKNDPDSVNFVARTEANNGISARVRLVEGKTPQPAGLIT CAGGGSVLSTFLQEEPFYSGRDLYLLVPLQPMSKLVKLFCITVLKANKYRYSYGRQANVT LPYLKLVLPAASDGKPDFAFMENYMKQLPYGDKIFG >gi|224461045|gb|GG657759.1| GENE 594 597419 - 597859 707 146 aa, chain + ## HITS:1 COG:CAC1675 KEGG:ns NR:ns ## COG: CAC1675 COG1959 # Protein_GI_number: 15894952 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 139 1 139 139 107 38.0 1e-23 MKISTKGRYGLRALVDMAANSGEEAVSLTLIAKRQNLSLNYLEQVFGILRKAGIVASVKG AGGGYRLAKDAAGITVKEILEALEGEFSIAGTAKGETEDAVGQAIRTLVWDEIDRRVNEL LKEKTLAGLAKEYRIKQEQSVHMYYL >gi|224461045|gb|GG657759.1| GENE 595 597912 - 599195 1410 427 aa, chain + ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 6 427 7 426 426 500 58.0 1e-141 MSRKRRFETLQLHAGQEQPDPASDARAVPIYQTTSYVFRDCQHAADRFSLADAGNIYGRL TNSTQDVFEKRMAALEGGVAALGVASGAAAITYTFQNLAQAGGHIVASKYIYGGSYNLLE HTLPSQGITTTFIDPDEEGAWEAAIQDNTKALFLESIGNPNANLADIGKAAEAAHRHGIV LVMDSTFATPYLLRPFEYGADIVVHSATKFIGGHGTAIGGVIIDGGGFDWKASGRYPQLT EPDNSYHGVVFTEAAGKAAFVTRIRAVILRDTGATMAPLHAFLFLQGLETLSLRVERHVQ NTLKVVEYLSSHPKVERVNHPSLPDSPYHELYKKYFPDGGCSIFTFEVKGSGEEAKRFID RLEIFSLLANVADVKSLVIHPASTTHSQMTEEELENSGIRQNSVRLSIGTEHIDDIIYDL EQALNAI >gi|224461045|gb|GG657759.1| GENE 596 599233 - 600162 782 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 309 3 305 308 305 52 5e-81 MGHIYKKVEEMIGRTPLLEVKRIEEEKGLKARVLVKLELFNPAGSVKDRAALSMLLDAEE RGLIAPGATIIEPTSGNTGIGLAAVAASRGYRTIFTMPETMSIERRKLLKGYGAEIVLTE GAKGMPGAIAKAEELAKETEHAIVLGQFVNKANAKAHMETTGPEIWEDTDGEVDIFVAGV GTGGTVTGTGTYLKEKNPDIRIVAVEPAASPVLSGGKPGPHGLQGIGAGFVPDILDTGIY DEIFTVENEEAYSASRLLAAKQGVLTGISSGAALHAAVELAKREENKGKTIVALLPDTGE RYLSTPLFE >gi|224461045|gb|GG657759.1| GENE 597 600244 - 601869 1760 541 aa, chain + ## HITS:1 COG:CAC3087 KEGG:ns NR:ns ## COG: CAC3087 COG1080 # Protein_GI_number: 15896338 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Clostridium acetobutylicum # 6 537 5 536 539 411 41.0 1e-114 MITLTGKKVSEGVAIGRLSFYRRDTKEIKKFDVKDVEKEIMRFQKGREKALLELKDLYTA SIKDVGEANAAIFEMQQMILEDQDFIDAITGVILEQKLNAEFAVQSASEHFIETCVQEGK NYVQGHDTDIRDVSSRLVRILSRSWKDRLLTDEPIVLAANELYPSEAVQLDKTKILGFVT RYGAINSHTAVLARTMGIPSVIGLGEALKKDYDGKTIVVDGFEGKIYIEPDYTTLTRMKQ KKENNVSQVKNLERLKGKDNVTQSGQRIDICANIGKREDIENVLRSDAGGIGLFRSEFLY MENRHKLPTEEQQFQTYKLAAEAMGAKPVVIRTADLGGDKPAECLDFGEENNPAMGYRGI RISLDKDEMFKTQLRAILRASVFGNVSVMFPMITSLEEVQSAKLVLETAKRELKEEKTAF DEEIQVGVMIETPAAVMISGELAREVDFFSIGTNDLSQYTMAADRQNDRISRYYDPHHPA LLKMIRIVTNNVHLEGKRISICGDLAADLSLTEFFIQIGIDELSVTPPQVLGLRKKIRDI Q >gi|224461045|gb|GG657759.1| GENE 598 602151 - 602897 825 248 aa, chain + ## HITS:1 COG:BS_fruR KEGG:ns NR:ns ## COG: BS_fruR COG1349 # Protein_GI_number: 16078502 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus subtilis # 1 238 1 237 251 167 39.0 3e-41 MLAEERYNAILRLVNDKKTVTVQELTEQLDTSESTIRRDLTVLHRKGSLIKVHGGATALN PEFMTKDAALSVRRDLNIEEKVAIAKYAAALVEKDDFVYMDAGSSVDLMIEHITEQEAVY VTNAIGHAQKLLKKGCRVYLLGGELKETTEAIVGAEAIEGLKKYNFTKGFFGANGVSREK GFTTPDITEALVKEKAVEQCRKSYMLSDSSKINQISPVTFAAFEDGILVTTRLKDESYRA CRNVVEVE >gi|224461045|gb|GG657759.1| GENE 599 602897 - 603817 1110 306 aa, chain + ## HITS:1 COG:BS_fruB KEGG:ns NR:ns ## COG: BS_fruB COG1105 # Protein_GI_number: 16078503 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Bacillus subtilis # 1 299 1 297 303 265 47.0 1e-70 MIYTVTFNPSLDYVIQTDKLSPGGINRAVSEHIYPGGKGNNVSVILSNLGHKSRALGFVA GFTGDALEEMLKARGCYTDFIRLEEGFTRINVKINDGQETEINGQGPVITQEAIEELYER LDRLVKDDILVLAGSIPDTLPADMYEKIMARLNGRGIRIVVDATKDLLLNVLKYRPFLIK PNNHELAEMFGAVLNTEEEIIRHAAMLQKKGARNVLVSMAGDGALLLSEDGEIYRSRPPK GEVRNSVGAGDSMVAGFLTGYLNTGDHEKAFKLGIAAGSATAFMNWLAGRDEITALLGEQ PSAYGL >gi|224461045|gb|GG657759.1| GENE 600 603831 - 605762 2328 643 aa, chain + ## HITS:1 COG:BH0828_3 KEGG:ns NR:ns ## COG: BH0828_3 COG1299 # Protein_GI_number: 15613391 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Bacillus halodurans # 297 636 2 332 336 288 49.0 2e-77 MKIVDLLKTTGIELNGAVNTKEEAIDRMVELMASGGNIADIEAYRAGVYQREEEGTTGIG EGIAIPHAKTDAVKSPGLAAMVLKDGVDFASLDAEPVHLIFLIAAPDTEDNVHLEVLSRL SMLLMDDSFRDDLMKAETAKEFLSVIDKAEQAKFPEEQEEKKAEEAPAERGYQILAVTAC PTGIAHTYMAAESLENKAKEMGYTIKVETNGSGGDKNVLTADEIAACDCIIIAADKDVKM ARFDGKPVLMTKVANGISKAEQLITEAVGGKVPVYHSRGGEEERMADDGEGLGRKIYKSL MNGVSHMLPFVIGGGILIALSFLVDGANAGGADFGKGSPMALFFNTVGNTAFGMMFPVLA GYIAMAIGDRPALMPGIVGGLLAKAGTSVTLPEEAWVSSGFFGALIAGFVAGYLMVLIKK LLGRLPKSLEGTKPVLLFPFLGILLMGVIMIFAVNPPIGAFNTWLNDMLAGMGESSKILL GAVLGGMMSIDFGGPFNKAAYVFGTAAIASGQIDIMAAVMIGGMTPPIAIALATTFFRNR FTKSEKQTTITNYIMGLSFITEGAIPFAAADPLRIIPPCVLGSAVAGALSMAFGCGSRAP HGGIFVIGIIENAPMFFLALAAGAVVSMAGIVLLKKPLPADKR >gi|224461045|gb|GG657759.1| GENE 601 605806 - 606063 380 85 aa, chain + ## HITS:1 COG:SA0934 KEGG:ns NR:ns ## COG: SA0934 COG1925 # Protein_GI_number: 15926669 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Staphylococcus aureus N315 # 1 85 1 86 88 66 44.0 1e-11 MKEFQYVLTDREGIHARPAGLLVKKANEFQSDIKIERGGKSADAKRIFAVMGLGAKCGEQ IAVTAEGADEEAAAAAMEAFLKENL >gi|224461045|gb|GG657759.1| GENE 602 606091 - 607710 1908 539 aa, chain + ## HITS:1 COG:CAC3087 KEGG:ns NR:ns ## COG: CAC3087 COG1080 # Protein_GI_number: 15896338 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Clostridium acetobutylicum # 5 539 4 539 539 448 45.0 1e-125 MITLEGKSVYGGIAIGKIAFYKRSEITIKRCHVEDTKREVKRFEEAKVKASQELQELHDK AVEDVGEANAMIFEIHQMMLEDLDYVESIVNIITTQEVNTEYAIGTTADNFAAMFQAMDD AYMQGRAADVRDVSERLLRVLSENKSGPMAVGEPVIIAADDLVPSETVQLDKEKVLAFVT MYGSANSHTAILARTMNIPAVIGTGEGLAQEYDGKTAVVDGFEGKIYIEPDGPTMERMQR KQQEDAAQRELLQQLKGKENITADGQKIQVYANIGSMADVGAVLKNDAGGIGLFRSEFLY LESNTYPTEEQQFGVYKTVAENMAGKKVIIRTLDIGADKQVDYFGLDKEENPALGYRAIR ICLTQTDIFKTQLRALYRASAFGQIAIMFPMIISVEEVRKIKGIIEEVKAELKAEGIQFR EDVETGIMIETPAAVMVSRELAKEVDFFSVGTNDLTQYTLAVDRQNEKLDEFYDAHHPAV LAMIRMAAESAHAEGKWIGICGELAADLSLTKTFLSMGIDELSVSPGMVLPLRKVIRES >gi|224461045|gb|GG657759.1| GENE 603 607816 - 609198 1774 460 aa, chain + ## HITS:1 COG:VC2278 KEGG:ns NR:ns ## COG: VC2278 COG2252 # Protein_GI_number: 15642276 # Func_class: R General function prediction only # Function: Permeases # Organism: Vibrio cholerae # 1 459 1 428 430 350 48.0 3e-96 MLEKLFKLNANGTDVKTEILAGITTFMTMAYILAVNPSILSATGMDSGAIFTATALAALI GTLLMAVCANYPFALAPGMGLNAYFAYTVVLGMGYKWEVALTAVFVEGIIFIVLSLTNVR EAIFNAIPKNLKAAVSVGIGLFIAFIGLQNANVVTGGSTLIQLFSLDGYNAAKGVEASFN DVGITVLLAIVGIIITGILVIKNIKGNILWGILITWILGIICQFAGLYVPNPEIGFYGLL PDFSGGLSVPSLAPVFMKLDFSGIFSVNFIVVIFAFLFVDMFDTIGTLIGVSSKANMLNE EGKLPRIKGALLADAIATTAGAVLGTTTTTTYVESASGVSEGGRTGLTAVTTAVLFGLAL FLSPIFLAIPSFATAPALVVVGFYMLTNVVNIDFEDYAESIPCYICILAMPFFYSISEGI SMGVISFVALNLLTGKAKEKKISVLMYILAILFILKYIFL >gi|224461045|gb|GG657759.1| GENE 604 609414 - 610133 647 239 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 197 2 196 234 90 25.0 2e-18 MKIAVCEDKEKEQDLLCELIKTAMARRDVDAELEVFGTAGELLKAAKKTFFSMLFLDILL PGLSGMDAALKLRREGNYSPVVFTTNTKEYMAQSYSVWAVDYLLKPLEQESVDEAFSRAL KVLEGTEKYLEIMVSRHIERIPYSDIYYMKGNNRNCMIYTRTGTYNPYESVQGILKKLTD NRFLNSHRSYIINLDHVIAVQRGKAAMRDDVLLPIRRGETGLVRRAWEDRRFEVVGRGE >gi|224461045|gb|GG657759.1| GENE 605 610134 - 611435 1083 433 aa, chain + ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 200 406 214 434 452 67 25.0 7e-11 MNTAIQLAARYILSEVPWYFLACVPFLKQRRVSRTVIGLMAAFMIAFRAASAFVLVLAVP NWLNYTAYAYLLNYLLLITLFIRAFRVSAVRLFYVFLLMYSISTCINQIAYGSLFYLFPY KAAGVPRFTLLTVMQFAGSLIVMPFLYRFCKGSLQTALEQLDKKSILLLCVTPLTFAVIA LAFVAYGDTKPVEDLSLNLLYLLVSLAGIISYFFNLKMLLNSAERLNKEHELETRLALQA KDYENLTQSIEAARAARHDLRHHLGAMRDFAGRNDTAGMLQYLDEYSASLPGDDVPDWCE NRTVNALLKHYLAIAAGAGVHLDVKLDLPMGAGVPDTDLCVVFGNIFENAVNAAAGGEDA FIRARCVTGGDDIVLTVENSIGSAASHGEGLGLRNVEAAVKKSSGTARFEKKGSVYTSKV ILRKVQQSGGRRR >gi|224461045|gb|GG657759.1| GENE 606 611432 - 612868 1257 478 aa, chain - ## HITS:1 COG:YPO0624 KEGG:ns NR:ns ## COG: YPO0624 COG1757 # Protein_GI_number: 16120950 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Yersinia pestis # 1 476 1 481 483 360 42.0 4e-99 MEKKKLEFKGGWSVAFLPVYIFLFFCILYFVVLKAFEMYALAMGALTALLISALFTKKGH YEAYWEAVYRGAKEAVPVTILLLIIGMFSAMIKAANISTGFVWLADRLHVGGGLFTAFTF FAVCVIASATGSSLGTMFTCFPIFYAAGILLGSDPAALAGAIVCGGIFGDNLAPISDTTI ISAGTQEYTKKSGFADVGGCVASRLKYSLAAGVISFVLFWIFGGGGTLGTGAEDILREHR NPAALVMLVPVAVMLFTAVRTRNIYKAITVGLILGTIVGLAFHLLTPESVLSVQDGAPAG FLTDGVNGMIATITLVLSVYGIMGVLTAAGALEKITDLILNSRLGQSSRGAETAMMLGIS VTTMFFGGVTSASMATFGKIQNEIGKRAGLHPYRRANLLDGFANSIVLAVPFLSVFVFIG SSLTAGYEYADALSVTQVAGFMFYCFSLFLVLLFSVFTGWGRTYEGENGRPEKARPPH >gi|224461045|gb|GG657759.1| GENE 607 612894 - 613949 1260 351 aa, chain - ## HITS:1 COG:mlr7180 KEGG:ns NR:ns ## COG: mlr7180 COG0667 # Protein_GI_number: 13475981 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 6 346 7 347 351 309 44.0 5e-84 MDQRIELTKDYTICRVLNGCWQLSEGHSLQGRLDLKDVMKAFHLLTEQGFTTFDCADIYT GVEEFIGEFVKELKSGHGISADDIQIHTKYVPDINYLSQVDYAFTEQIIDRSLKRLNRDT LDLVQFHWWDYDVPGYTETAGYLLRLKEKGKIRNIGVTNFDTARLKELVDAGIPVVSMQA QYSVFDRRPERNMLDYCKANGIKLLCYGTLSGGFLAEKWLGKNMTEPETRSQVKYLQIIE DTLGWDGYQELLGLLSKIAEKYNAGIPNVASKYILSQAGVAGAIIGIRNSQHVASNARIF EFDLDEEEIETIRAFLQQFPAPEGEPFELERTPSSKYRSIMHMNINEKEQS >gi|224461045|gb|GG657759.1| GENE 608 613933 - 614319 234 128 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1906 NR:ns ## KEGG: HMPREF9243_1906 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 2 105 3 106 110 164 72.0 8e-40 MNDEFTLYDLKVEVISSDKPMVCRHREGDYFLVEGENLVFPQTTSFSMYSLAALLPLLPA KQRELHENDWMLSDSIIACPDPNCGARFKITRTRPRTLRHSECTVEKIHSTKDDITMNME EIKNGSED >gi|224461045|gb|GG657759.1| GENE 609 614749 - 616068 1442 439 aa, chain + ## HITS:1 COG:BH1762 KEGG:ns NR:ns ## COG: BH1762 COG3048 # Protein_GI_number: 15614325 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Bacillus halodurans # 9 427 11 429 442 509 57.0 1e-144 MDKKIMELPVVKKIAEARDLAWVNPKLKPFADVSLEVAMADIEDAEKRLARFAPFIVKCF PETADRGGLIESALTPVPKMQAYVNRVYGSALPGRLLLKQDSHLAIAGSVKARGGIYEVL KHTEDLALEAGLITMEDDYSVLASDECRTFFSQYTIQVGSTGNLGLSIGIASAAVGYKVI VHMSADARQWKKDMLRSHGVKVVEYESDYSEAVKNGRRQSDADPKSYFIDDENSKNLFMG YAVAAKRLRTQLTELDVTVDGDHPLFVYIPCGVGGAPGGVTFGLKELWGDNVHCFFAEPV QAPCMLLGMATGLHNDISVQDVGLTGLTHADGLAVGRPSGFVGKVMEPLLSGEFTLEDKR LYEYMRNLLETEDIFLEPSACAAFEGPVRLLQYEETKAYIKEKGLWDKMDDAVHIAWATG GRLVPEDIREEYKNTYLDQ >gi|224461045|gb|GG657759.1| GENE 610 616096 - 617118 1127 340 aa, chain + ## HITS:1 COG:mlr0093_1 KEGG:ns NR:ns ## COG: mlr0093_1 COG0303 # Protein_GI_number: 13470396 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Mesorhizobium loti # 4 327 6 324 330 111 27.0 2e-24 MKQIKVEDAVGSVLCHDITQIIRGVTKDAVFRKGHVITEEDIPVLLSVGKEHIYVWEASE GMLHENDAAEILRRISQGAHMHPSAVKEGKIELIADCDGLLKVDTGRLHAVNSLGEMMIA CRHGNFPVKKGDKIAGMRVIPLIIEEEKMRQAETLCGRKPLFQILPFGRIKAAVVTTGSE VYSGRIRDEFTPVVIGKLKEYEVEVTRTVTCNDDPAMTAEAVRGCLRDGAGLVICTGGMS VDPDDRTPLAIRRCADEVVTYGAPVLPGAMFMLAYAAGIPVMGLPGCVMYAKRTIFDLVL PRVLAGERLGAEDFQCLGQGGLCLSCPVCTFPNCGFGKGA >gi|224461045|gb|GG657759.1| GENE 611 617121 - 618161 978 346 aa, chain + ## HITS:1 COG:ECs3748 KEGG:ns NR:ns ## COG: ECs3748 COG1975 # Protein_GI_number: 15833002 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli O157:H7 # 72 231 95 253 541 93 32.0 6e-19 MDTLYELIQNRDAGEDNMTALVIAGTAQGEKVFLSGREVIWKSGDCPFLTGHLAELTEVQ GNGVIELDGQRVFCEYTGCRKELVVCGGGHVSVPIIQIGKMTGFYVTVLEDRPRFADCAR KAGADQVICEPFADGMDKIEGSTDTYFVIVTRGHRYDSTCLREAVKKPHAYVGMMGSRKR VGIVRQQLKDEGTPGTLLESVHAPIGLDIGAETPEEIAVSVMAQIIQVKNSRRRNEAYVP EIRKYLTETPRQGLRSVLTVIVSRKGSAPRETGTKMLVREDGQTFGTIGGGCAESEVIKR ALLMMREGKAAELCTVDMTGQEAEDAGMVCGGIIEVWMESVPIDKA >gi|224461045|gb|GG657759.1| GENE 612 618212 - 619639 340 475 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 85 474 62 430 447 135 28 9e-30 MGNEKNKTYSSPYELEGRIPFGQAAVLGLQHVLAMFVGNLTPLLIIGGMCGLGDAGVLRD VLQSAMLIAGVVSLVQLFTIGPVGARLPIIMGTSSGFIGVSKGICASMGGGVIAYGAILG ASLIGGLFEGVLGFFLKPLRRFFPPVVTGTVVMAIGLSLISVGINSFGGGNTNGDFGSPV NLLVGAVVLISIILLKHFTKGISSAASILFGIIIGYIVCAMLALFLPTTYEYVDAETQKT ITATCSWVLDWGKVAGADWFSLPKIMPVKFVFDVKAVIPMLIMFVVTAVETIGDISGITE GGLGREATDKELSGGVICDGLGSSFASFFGVLPNTTFSQNVGLVGMTKIVNLFALSIGAG ILVLCGFFPKIAALFEMMPQSVLGGAAVMMFSSIVVSGIQLVTKRGVNNRVVTIVAVALG FGYGLGSTADVLNQLPQWVGYVFGGSGIVPAALVAMALNIAIPEGRDPFAGENEG >gi|224461045|gb|GG657759.1| GENE 613 619643 - 621442 2128 599 aa, chain + ## HITS:1 COG:CAC3012 KEGG:ns NR:ns ## COG: CAC3012 COG0488 # Protein_GI_number: 15896264 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 597 1 631 632 540 45.0 1e-153 MNLLTMEGVTKSYTDKILLDKVDFAVNDHEKIGIVGVNGAGKSTLLKVVSGLEAADGGSV SSGKNVKLRYLPQTPVFDGGATILEAVLKDNADKSNEWTIESEARAMINRLGLPSYDTKV DTLSGGQKKRVALAGALLAPVEILVLDEPTNHLDGAMAEWLEQYLIRFKGAIVMVTHDRY FLDRVATRIVEIERARLYNYPGNYSEYVSLKMQRQSMENAAERKRQSLLRTELKWLARGA RARSTKQKAHIQRIETLKEQSAPEQEKQVAMSSVSSRMGKKTIEVSHIAKSYGGRTVIED YSYIFLRDDRIGIVGENGCGKSTLLKIITGNLAPDSGFVDMGETIRVGYFSQENEYMDDS KRVIDYVKEAGEYVTIPEGTVSASQMLERFLFDGALQWSRIEKLSGGEKRRLYLLRILME APNVLVLDEPTNDLDIQTLNVLEDYLDRFDGIVITVSHDRYFLDRIVNRIFAFEGEGRIA QYEGGYSDYLLKSADAGEAAAPGPEREKKAKEERSWKSGPKKLRFTYKEQREFEVIDEKI AELEENIGELEERITLNATNSAALNELMKEKEEAEQKLEDMVERWVYLNDLNDRINSQS >gi|224461045|gb|GG657759.1| GENE 614 621629 - 622912 1249 427 aa, chain + ## HITS:1 COG:CAC0282 KEGG:ns NR:ns ## COG: CAC0282 COG0402 # Protein_GI_number: 15893574 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Clostridium acetobutylicum # 7 425 9 424 428 405 47.0 1e-113 MNESVFILRGDICCSRSLTELTVQKDGYVVCRDGISEGIYERLPDRYKDCPVRDTKGALI LPGLVDLHIHAPQYTFRGLGMDLELLEWLNEHTFPEEAKYADIEYAKEAYGRFVEKLKYS ATTRACIFGTIHVPATEYLMDLLEQSGLCTMVGKVNMDRNAPDPLTEQSADKSAYDTVEW VKDCLKRYRKTKPILTPRFIPTCTDALMENLKKIQMRYGLPVQSHLSENVSEVGWVQELC PGSEFYGDAYDRFGLFGADTRTVMAHCVYSGVQERRRMKENGVFAAHCPESNMNLSSGIA PVRAFLDEGIPTGLGSDVAGGSTEDLFAAMAHAIQASKLRWRLVDDTLKPLTAAESFYLA TKGGGEFFGRVGSLEEGYEFDAVVIDDSAVSDREKAEISERLERLIYLSSESKITGKFAA GEEIFWR >gi|224461045|gb|GG657759.1| GENE 615 622917 - 625220 2386 767 aa, chain + ## HITS:1 COG:ygeS KEGG:ns NR:ns ## COG: ygeS COG1529 # Protein_GI_number: 16130768 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 14 765 2 752 752 684 46.0 0 MEQRRRAVGTSVNRVDAYDKVTGRARYTDDLCGKEAYIARVVHSTVANGRVLSVDKSEAE KLPGVIRVVSCFDVPKNYYPTAGHPWSVEEAHQDVSDRLMLTDRVRFYGDDVAAVVAEDE VTAARAAGMVKIEYEEYPFVLDVREAMEDGAPQLHEDYPGNVLNHTSIRSGSYEEAIKEP GLIKVEGWYDTPSVQHCHIENFICYAYEADHKINVTSSTQIPHIVRRVVGQALGIPWGRV RVIKPYIGGGFGNKQDVLYEPLCAFLSTLCGGHLVKLDVSREEAFNCTRVRHAIRSHIIS WVRPDGTFAARKLTAYSNQGAYASHGHGVVAKGMGAFPQLYPCPNVEADSYTVFTNRPVA GAMRGYGIPQAMFAVESHTDDVAKAVGMSPLEFRRKNLMPQGYVDAFSKNENYFDTFNQC MAKAAAYMDYDRKIKEYDGQDGNIRRGIGLAVFWYNTAVWPISLETSSCRMVLNQDGSIQ VQVGETEIGQGADTAFSQMAADALGIPFEDVHIISSQDTDVTPFGTGAYASRQTYTAGFS IEQTAGLLKGRILSYAQELTRMPASQLELVDGVIVRKSDARPMMTLGELASEALYSLSHS EHLTAESTYQIKSNAYSFGCTMAEVEVDIEACKISLMDIVNVHDCGKLINPALALAQVHG GMSMGIGYGLSEMEKFDAATGRTLNGNLLDYKLSTAMDHPHLEGQFVKNYEPTSAFGTKA LGEPPVCSVAPAIRNAVLQATGIGIDQIPLNPHVLFEEFKKGGLLDV >gi|224461045|gb|GG657759.1| GENE 616 625213 - 626097 854 294 aa, chain + ## HITS:1 COG:ygeT KEGG:ns NR:ns ## COG: ygeT COG1319 # Protein_GI_number: 16130769 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 292 1 290 292 264 43.0 1e-70 MYDIKALYEAENISHAIQLLEEHPDARVIAGGSDILIKIREGKLRQPELVSIYGLDELRG VSVKEGGTLRIGSLTSFSHITKNPLIQKHIPVLGEAVDKVGGPQIRNIGTIGGNTCNGVT SADSASTLFAYDAQVELAGPKGVRTVPVQEFYIKAGTVDLQHGEIETAILIRKDSYEGYA GHYIKYAMRNAMDIATLGCSVNVKLAAGGKHLEDVRIAFGVAGPVPLRCPAAEQAVKGRA AGEETYRLAAEAILQDIHPRDSWRASRAFREHISQVLVKRALAEAVLRAGGEAR >gi|224461045|gb|GG657759.1| GENE 617 626184 - 626612 447 142 aa, chain + ## HITS:1 COG:ECs3741 KEGG:ns NR:ns ## COG: ECs3741 COG2080 # Protein_GI_number: 15832995 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli O157:H7 # 8 132 28 152 159 134 55.0 7e-32 MVDVRASLTDLLRNDYHLTSVKKGCEVGECGACNVIIDGECYNSCIYLAVWADGKDIRTL EGLMGPDGELSDIQQAFIDEAAVQCGFCTPGFIMSAVEILESGREYTREELRKLLSGHLC RCTGYENILNAVEKTMKKRLSL >gi|224461045|gb|GG657759.1| GENE 618 626636 - 626728 109 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARIPEGYAQRFFVFLLLSVAGQHLFFHI >gi|224461045|gb|GG657759.1| GENE 619 626687 - 628255 1191 522 aa, chain - ## HITS:1 COG:CAP0121 KEGG:ns NR:ns ## COG: CAP0121 COG2508 # Protein_GI_number: 15004824 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Clostridium acetobutylicum # 98 511 100 536 543 102 23.0 2e-21 MTLTLKELVKELERYSPDIVQDCGYPISAVRLFSRKELSAEQGVLFIGRAEELPDIPPVG RISFLVAGSDVPESYLRPEAGCTLVTVSESADTHLLCNTVWKLLEEEVHTSKNILKLLKV KKSKTTLQELMDLGYEILGNPLLLVDVSLCFIAHAGGNSSSQEPLWEWTLSRGYVSDQYI EQIHMDMMEDLNSDSPRNDFIWEKGILNHNQLVYKINDNGKPLAYLKVLALNKPISGSDQ EIVEALGNCILYFLLESTNTYTPSSPLAESFFIALLNEKLYDEDAVEERIHQFNIKLYDY ITLLVIELTEDYMQDISKVYMLKRVLQNFLARNTIIYYKGYLVAVFDTKTDTLFSESDER QFANLLEKQNCRAGISYTCKNLYSLPEQFSQAVSALNTSWKLHHKERIVKYSDYLLQHIF LNYADRESLNYLVHPAISDILKMDADKRELFLDTIRGYINNGTEISAASKKMYLNYNTLK YRINRIVEMTGLDFGDAQTIFRLQLSFMILDMKKQMLSGDGQ >gi|224461045|gb|GG657759.1| GENE 620 628537 - 629718 1430 393 aa, chain + ## HITS:1 COG:AGc4286 KEGG:ns NR:ns ## COG: AGc4286 COG0477 # Protein_GI_number: 15889635 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 368 1 372 400 80 25.0 6e-15 MSNAKSRIKISIYAIALLMMGVIGITSALATIGANFPDASQTMIQNLISVPCFAIIPTTL IVGKLMEYVPKKIIAAAGAVCFLAGGLIPAFVTTSFGLILVMRAVLGIGVGISQVVSTAL VADNFSGEEQQKVQGTLQASQMGGVAVMVFAGGWLADIQWNYVFYVHIIAVLTLAAVVFV LPMQKVAVKKEASGEKQSVHLTKATWLWVVFMFAVFVAIQVYSIFLSFLVQERGLGTAAD AGLGLAFFAAGGVVMGLLYSRLVKASRNCSVAVGCLMLAVSYFIMAYAGNMILCHIGSLL LGMAVSVIVPGVMIYTGHTVDPFSVGMAISLVTCAQNFGQCVCAYIVNPLTTLFGSSSNV NFTAFILAGILSGALTVVMLIWGMRRNKAEVNS >gi|224461045|gb|GG657759.1| GENE 621 629719 - 631716 2250 665 aa, chain + ## HITS:1 COG:CAC1044_1 KEGG:ns NR:ns ## COG: CAC1044_1 COG1902 # Protein_GI_number: 15894331 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 8 421 1 413 413 348 45.0 3e-95 MKKGETHMYNTLFSSCNIGTLEIPNRAVMTAMGNHIAEEDGTVSDADIAFYGARAKGGVG LVITECACVDFRTGKGNLRQIAVDDDKYIPGLKKLADEVHKYGSVLAVQIYHPGRQGIAE LNGVESMKSASKTECRCVHQPAHEMTTDEIKEMTELFAAGAKRLKEAGVDAVELHGAHGY LIGQFLSPYTNKRTDRYGGSFENRMRFLDEILDAVRRECGGDYPVIVRFSADEHMEYAGL PGEGLCLEDGVKIAKHLAGKGVDALDVSAGIYETMNTAWEPVGFDQGWKMNGAEAVKKAV RIPVIAASVIREPGYAEEVLKEGKCDFIGSARAFFADPDWMRKAREGKEKEIRKCISCLY CMETLMAADMSGTPMGCAINFQGCREDKYSDEMLKKDGEKRVVAVIGAGPAGMEAARILA MRGFSPVVFEKQGEVGGQIALASKPPKKEKTGWLIDYQKYQMEKLGVEVRLNKAPTLEEL KALHPYAVFVSHGSNPIMPKSIRGIGGANVYTPVEILNGTVTLENKNVAVVGSGMTGIET AELLGDRGNKVTVFEMADDIGPGIFFQNLIDVMGRVSTHGTKLYPKHRLVEIDGTTAAFE NTETKEQERFDFDAIVVSLGTSSNTELKEELDKEFERVVYLGDAKQAGRIENAVRTGYLA AAQLN >gi|224461045|gb|GG657759.1| GENE 622 631735 - 632898 1260 387 aa, chain + ## HITS:1 COG:MA2630 KEGG:ns NR:ns ## COG: MA2630 COG1454 # Protein_GI_number: 20091453 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Methanosarcina acetivorans str.C2A # 2 352 16 367 400 192 35.0 1e-48 MLKSGMYTQLAPVLFGSGTAGQAGEIVKSFGCSKVMLVSDEGVLEAGAAGKVRRVLERSG IEVVMWAEAETDCPEESVKRAAAVGRREKIDGVVGVGGGSVLDTAKAVSAVVPNDDQVLD DIVLYLTGQKEYANAPVPVIEIPTTAGTGSESTFVAVVTSDKLDCKIGLPVPPSYGIVDS ELMKTVPPYITAFTGMDALSHASEALTEQKNTPHSDLLACEAIRLIKENLPAAVKDAADM EARDRLAFASSIAGISFNESGVHIGHSAAHALGHLYHIPHGVCCANLTPAVIRFAAKTYP QKMKRLGELMGAAITSDDPEVIGKEAADAVRSFARAVGIKSFKELGLTKEQMMAAKPMFY GDALCMAFGGEVTEQDAADILADAYEG >gi|224461045|gb|GG657759.1| GENE 623 632915 - 634093 1210 392 aa, chain + ## HITS:1 COG:BS_gbsB KEGG:ns NR:ns ## COG: BS_gbsB COG1454 # Protein_GI_number: 16080157 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Bacillus subtilis # 22 385 32 396 403 187 33.0 4e-47 MLRPGVYKQIAPVLFGSKMAAQAGKKAKELGVGRLLLVCDEGIRQTGMDSKMEHILKESG LIVTTWYGVQTDCPDGTVEEAVRIIGENHIDGVLGLGGGSVLDTAKVIAAAAANGLEILG EVLEYLSGAKSYAHHPLPLILMPTTTGTGSESTFVAVVTSSALDAKVGLPCAADCAIVDP ELTMSVPPFVTAFTGLDALSHANEALAEKKNTPHSDLLAFEVVRLIKTYLPAAVADGSDR EAREHLAFASNLAGIAFNESGVHIGHACAHALGHLYHVPHGVCCANLTPAVIELQARAYP EKMKRLGLIMGAKISTDEPGEIGKKAADAVRAFAKELGIPSLNEQGFTEAQILEALPIVL NDPLGYAYDGQITEEEIRFILKRAYRGSYGGN >gi|224461045|gb|GG657759.1| GENE 624 634399 - 637056 2591 885 aa, chain + ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 4 858 5 862 893 638 42.0 0 MDNHRQMPWHSMQIEEVYRTLGTSVEGLSDAEAAERLRKNGRNELRRKPPKTISQMLREQ VTDPMVLILIGAAAFSAVLGEWTEAAVIFTIVIINAVIGIVQEKKAQSSLEALRNMSALT ARALRQKEESIIPAAELVEGDVVYLSDGDMVPADIRLTESANLKVQEASLTGESLPSEKE ADAVLPGETVLGDRRNMLYRSSIVTYGRAVGVVAATGMQTEVGGIAGMLESEDELDTPLK RKLNAVGRTLTAAGLIVCVLIFVLGALYERPIIPQFLVAISLAISIIPEGLPATATIVMA LGVQRMAKQNALIRKLPAVETLGEATVICSDKTGTLTLNKMTVTHAAANGDFEAGRAIPV GEAARQHPDVYREIVYAAALCNDASLDPDESGGIIGDPTEGALIYMAQEFGIDHESLEDT YPRLFEQPFDSERKRMTTVHRIDGSYVAYTKGAVDEMLPLCSHILTAQGVRPMTEDDRAN ILALCRKMSEDALRVLGFALRTIRDIPDKDGENVEADMTFAGALGMIDPPRQEVADSVRI CRKAGIRTVMITGDHKVTALAIAKELGIYKEGDMVISGEELDAMDDEALMASAGSAAVFA RVSPADKLRIIKALKRAGEIVAMTGDGVNDSPALKAADIGVAMGKTGTDVAREASDMILL DDSFTTIAFAIKEGRRVYRNIQKVIQFLLVGNIAEILTLFAATVFNFDAPLLAVHILWVN LATATLPALALGVDPASRNIMKHQPVKSGTLFEKDLVRRVIVQGIFVAAMTTAAYWTGAA TGGHAAGQTMAFCTLAFSQMLRSFNERSNTEPVWVRAEGANPWLLAAFAVSAALMACILF LPALREAFRLVPLSGIQWAAAAGFSVMTVVQAELEKWIKRLKRSR >gi|224461045|gb|GG657759.1| GENE 625 637048 - 638436 1125 462 aa, chain - ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 7 452 4 453 468 244 35.0 3e-64 MNGQNRKMELLGSVPVPRALLALGLPTMTGMMINALYNLVDAYFVGGLGTSQMGAITVAY PLGQIVVGLGLLFGNGAASYLSRLLGNGDRETADKAASTALYSSILVGSTVILCIILFLE PVLKQLGATKSVMPYAVTYTGIYIVSSIFNVFNVTMNNIVSSEGAARTTMCVLMTGAVIN VILDPVLIYGFHLGVAGAAAATAVSQFVSTLVYLLYIFTKKSVFSFSIKNCSFSKELLSE ILKIGIPTLAFQVLTSLSITMINHAAKEYGDFALAAMGPVTKIMSVGSLMVFGFLKGLQP IAGYSFGAKKYDRLMQAVRTSVIWSTIFCILFGLTASLFAGDIMALFTNTDLDMITTGAA ALRASGLSFAVFGFYTVYSTLFLSMGRAKEGCLLGACRQGICFVPVILIFPAVWGLNGIL YAQPAADILSAGAAIVMAVRLRKELRAAKAHSFAARTDIPLS >gi|224461045|gb|GG657759.1| GENE 626 638558 - 639091 654 177 aa, chain + ## HITS:1 COG:MA2093 KEGG:ns NR:ns ## COG: MA2093 COG1695 # Protein_GI_number: 20090938 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 1 176 1 173 189 112 34.0 5e-25 MATIDLIVLGMLKNESLSAYDIQKLVEYRNISRWVKISTPSIYKKVIQLEEKGFIESNIV KEGKMPEKAVYSLTGAGEKQFEKLMMEISSKPLRIFLDFNAVIVNLTELAPEKREICLGQ IGESVKTLKAYLEENMKIKENIPDIPETGKAVLRQQMILVQAIETWLDSLKGSFEEQ >gi|224461045|gb|GG657759.1| GENE 627 639221 - 640555 391 444 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 20 439 13 421 447 155 28 1e-35 MTDKERTRSSIFDLKGVPDIKQALPLALQHVVAMIVGCVTPAIIVAGVAGLSEKDSVILI QAALIVSGISTLIQLFPFIHTRWFTIGSGLPIIMGISFAYLPSMQTIAAEFDIPTILGAQ IVGGCVAVFVGLNIKRIRRFFPPLIAGTVVFTIGLSLYPTAINYMAGGVGSPDYGSYRNW IIAVITLVIVTLLNHFGRGIFKLASILIGIIGGYAAALCMGMVDFSPIAQASAFQLPMPL HFGVKFEISSCVAIGLLFAINSIQAIGDFSATTSGGLDRMPTDGELQGGIVGYGITNILC SLAGGLPTATYSQNVGIVATTKVVNRCVLGLAAVLLLAAGFIPKFSSLLTTIPYAVLGGA TVSVFASIAMTGMKLITSENMSYRNTSIVGLAAALGMGISQATEALQNFPDWFVMIFGKS PVVIATLIAVLLNIILPKDLEAGS >gi|224461045|gb|GG657759.1| GENE 628 640570 - 641517 1241 315 aa, chain - ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 5 312 3 308 310 387 66.0 1e-107 MTKKKRVVIALGGNALGNTLPEQMAAVKITARAIVDLIEEGCEVVVAHGNGPQVGMVNNA MLALTHEDKEQPNTPLSVCVAMSQAYIGYDLQNALREELLDRGIDNIPVATMITQVRVDE NDPAFDSPSKPIGKFVTKEQAKEMALKYDYIMKEDAGRGYRRVVASPKPVEIIETGTIKA MVDSGELVIACGGGGIPVIRQGNHLRGASAVIDKDFASCLLAKELDADFLIILTAVEKAA IRFGQPDEKWLDKVTVSEMRQYMEEGHFAPGSMLPKVQAAVDFAASRPGRCALITLLEKA KEGINGTTGTLITLD >gi|224461045|gb|GG657759.1| GENE 629 641537 - 642730 1330 397 aa, chain - ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 395 2 395 396 547 66.0 1e-155 MKTLQDYIDKLNSLNFKEMYNGDFFLTWEKTDDELEAVFTLADALRFMREHNISTKVFES GLGISLFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIG IRDDMYIGKGNAYMHDVADAVTEGNKAGILAQKPTLVNLQCDIDHPTQVMADMLHIIHEF GGVENLKGKKLAMTWAYSPSYGKPLSVPQGVIGLMTRFGMDVVLAHPEGYEVFPEVEAVA AENASKSGGSYTKTNDMKEAFQDADIVYPKSWAPFAAMEKRTDLYAKGDQAGIDALEKEL LSQNAQHKDWACTEELMKTTKDGKALYLHCLPADITGVSCEEGEVDASVFDRYREPLYKE ASFKPYIIAAMIFLAKFADPADILKKLDEKGTPRILK >gi|224461045|gb|GG657759.1| GENE 630 642758 - 644068 1109 436 aa, chain - ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 3 431 7 396 403 563 64.0 1e-160 MDFNKIKETAKNYEADMTRFLRDIVREPGESCDEKAHIERIAGEMRKLAFDKVEIDPQGN VLGYMGTGSTLIGFDAHIDNVGIGNIDNWDFDPYEGYETETEIGGRGVSDQLGGIVSAVY GARIMKDLGLLSDKYQVLVTGTVQEEDCDGLCWQYIINEDNVRPAFVVSTEPTDGGIYRG QRGRMEIRVDVQGVSCHGSAPERGDNAIYKMADILQDVRALNENDDSDGTKIKGLVKMLN ETYNPQWKEANFLGRGTVTVSEIFFTSPSRCAVADSCAVSLDRRMTAGETWESCLDEIRA LPSVKKYGDDVKVSMYTYDRPSYTGCVYPIECYFPTWVIPEDHEVTRALEEAYKGLYGSS RLGNAQTEAERKDRPLTDKWTFSTNGVSIMGRNGIPCIGFGPGAEAQAHAPNEKTWKDDL VRCAAVYAALPSVYCK >gi|224461045|gb|GG657759.1| GENE 631 644136 - 645386 1253 416 aa, chain - ## HITS:1 COG:STM1002 KEGG:ns NR:ns ## COG: STM1002 COG1171 # Protein_GI_number: 16764362 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Salmonella typhimurium LT2 # 37 403 35 401 404 402 53.0 1e-112 MSRPSETELKWTLNNMPESDDLQLASMSEEEMKKARSFHQSFPQYSVTPLTKLSGLADYL GLRSLYVKDESYRFGLNAFKVLGGSYAIARYIAKQLGKDVSDVPYGVLTSEKLRREFGQA TFFTATDGNHGRGIAWAANKLGQKCVVRMPKGTTQTRLENIARENATVTIEDLNYDDCVR KAAKEAEETEYGIMVQDTAWEGYEEIPTWIMQGYGTLATEAAEQLEEDGVKRPTHIFIQA GVGSLAGAVIGYFANRFKEHPPVMVVVEAKAADCLYRSAVRGDGSCVDVTGDMLTIMAGL ACGEANTVSWDILRNHADAFVSCPDWVSANGCRIYAAPLRGDSQVISGESGSVCMGLVAA LMTRPEYSELKEALKLDGNSDVLLVSSEGDTDPERYHEIVWEGLCGTDKEPFSELL >gi|224461045|gb|GG657759.1| GENE 632 645416 - 646066 672 216 aa, chain - ## HITS:1 COG:YPO0626 KEGG:ns NR:ns ## COG: YPO0626 COG2964 # Protein_GI_number: 16120952 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 16 190 5 175 196 75 31.0 9e-14 MADSRLEMLKQIAAGMAAQFGENCEVVVHDLTKSSIDSSIVHIENGHITGRRLGDGPSAA VLNAVKHQNGPLEDHLAYLIKTDNGRILKCSTIYINDDKGRPRYILSINYDITNLMALEG SIHALTSCPPEEEDSKAGNPPKKITHDVSELLDELIEESVELVGVPAALMTKDEKIKAIR FLNDAGAFLITKSGDKVAKYFGISKYTLYSYVEINK >gi|224461045|gb|GG657759.1| GENE 633 646504 - 647835 1616 443 aa, chain + ## HITS:1 COG:ssnA KEGG:ns NR:ns ## COG: ssnA COG0402 # Protein_GI_number: 16130781 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 24 443 45 462 464 226 32.0 6e-59 MLVIGSGKTITLDAQNPYIENGAVAMDGNRIIAVGPADDIRKSYPDAQFIDAGGNVIMPA FINAHEHIYSAMARGLSIKGYSPKGFLDILDGQWWTIDRHLTLEQTRYSAVDTMISCIRN GVTTIFDHHASYGHITDSLFTIAEVAKELGIRACLCYEVSDRDGQDKAREAVRENAAFIR HALKDDTDMLAGMMGMHAQFTISDETFELAAANKPAEAGYHIHVAEGIEDLHDCLNKYGK RIVDRLMDHGVLGEKTLLGHCIYINPHEMELLKETDTMVVHNPESNMGNACGCPPTMELV RRGILTGLGTDGYTHDMTESFKVANVLHKHHLCDPNAAWSEVPKMLFENNAAIANRYFKA PLGVLREGAAADVIIVAYDPPTRLTKDNIYGHILFGMTGRDVVTTVGNGRILMQDREVKV IDVKEAMEKCREQSDILWKSING >gi|224461045|gb|GG657759.1| GENE 634 647858 - 650848 2813 996 aa, chain + ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 441 959 1 534 582 389 42.0 1e-107 MSDKMTCMPFSQLMEWIRAEHDTKGTVFGVHRPYKADASRSLTIFGRNLETVIGPAAGPN SQLAQNIAASYYAGARFFELKTVQIMDGDELAACVNKPCIKADDECYNCEWSTELYVPQA QEEYIKAWFLLSFMAKEYGLGSMDGFQFNISVGYDLAGIKSPKIDHFIESMKYAGHTDTF RECRQYLLEHAEEFGRMTAEDIEAISPDICNSATISTLHGCPPQEIESIADYLLKEKRMH TFIKCNPTLLGYDFARATLDKMGYDYVAFGRFHFEDDLQYADAVPMLKRLMKLSASLGLE FGVKITNTFPVDVKAGELPSEEMYMSGKSLYPLSISLAAKLSQEFAGRLRIAYSGGADAF NIERIAGCGVWPVTVATTILKPGGYQRLLQMAEVLDDMGMKPFDKTDTEGLIKAAQDAVC DRHHMKPAKMPASRKSSEKVPLLDCYTAPCEDACPIHQEVSTYMRLSGEGRYEEAMQVIL NENALPFITGTICAHGCMSHCTRNFYESPVQIRDTKLLCAGKAYEAALSSLEPAKSCGRR AAVVGGGPSGMAAAFYMARAGVQVTIYEKRPVLGGIVSSVIPDFRIDDTVIAKDVSFLEK LGVEIKCNTQAPPVSELKRAGYDSVILAVGAYKRSSLKLEGGTPVNALAFLEEFNETKGT IRPGRNVVVIGGGNTAMDTARAAVRCPGVEHVYLVYRRTKRYMPADEHELLQAVADGVEF RELLAPARMEKGALICRKTTLGAPDASGRAGVRETEETEKIPADMVIAAVGEKVPADYYE ENGICVDEKGRPKVDSNLGTNVPGVYVIGDGLNGPSLVVKGMADAKTAAEAAAGKPVSGH RSSPAVKSDVYARKGILAEPSDKKEAQRCLSCSTVCENCVDVCPNRANISVHVPGMEKEQ VIHVDYMCNECGNCRSFCPYDSAPYLDKFTLFAKEADMEESKNDGFAVTDQAAGLCRVRY LGRMHTVNAAEAKELPEGIARLIETILKDYTYLISS >gi|224461045|gb|GG657759.1| GENE 635 650869 - 652251 1322 460 aa, chain + ## HITS:1 COG:BMEI1644 KEGG:ns NR:ns ## COG: BMEI1644 COG0044 # Protein_GI_number: 17987927 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Brucella melitensis # 3 451 8 454 489 335 39.0 9e-92 MKRLFRGGTVVGPERTEKLDILVKGEKILAMGENLDFHGAEVIDVEGKLLFPGFIDAHTH MDLEVSGTVTADGFDTGTKAELSGGTTCIVDFATQNKGESLAYALSCWHEKAGGRSSCDY AFHLAMSDWNEEVSEELAQVTASGIHSFKLYMTYDAMVVDDRTIYEILSRLKELGGIAGV HCENKGIIDARTAEVMKKKGNREHVSDYPGTRPAATEAEAVGRLLKIAGCVDTPVIVVHL SSKEGLAEVRRARESGQTVYVETCPQYLVMDESKYHLPDNEGRNYMIAPPLRTKEDQQEL WKALRENEIQTVCTDHCSFTTSQKKMGESDFSLVPCGMPGAEERPALMYHFGVRQGRITL EQMCAYLSYGPARLYHLYPKKGALEPGCDADIVVWDPEAEWTLSAESQKSAADYCPLEGT VLKGRAEKVYLRGELAAENGAIVREYGGRYVTAQEAADIG >gi|224461045|gb|GG657759.1| GENE 636 652266 - 653030 865 254 aa, chain + ## HITS:1 COG:no KEGG:CLH_0604 NR:ns ## KEGG: CLH_0604 # Name: not_defined # Def: conserved hypothetical protein TIGR03172 # Organism: C.botulinum_E3 # Pathway: not_defined # 8 243 8 265 271 137 33.0 5e-31 MIRSYRSSRPIENESLKSALLLDGFSAPIISIVGAGGKTTIIRQLAREYEAEGQPVIVTT TTHMWQPDDGFYLSSPDLELLYRMLKHKRPVWAGYPEPDGKMSAFPTAFLEAVRMLAVPV IIEADGAKGQPLKVPGAHEPVLWGKTMVLLGVAGLDAVGGRIREVCHRPEEAAAFLGKDM DDRLECEDIAAIGLSDMGMKKSMDPFMKFHIILNKADNAERIRMGERVAGLFAEKGFYNV VLTAGLGGTYECTD >gi|224461045|gb|GG657759.1| GENE 637 653014 - 654369 1196 451 aa, chain + ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 3 254 271 522 541 213 45.0 6e-55 MNVLIKGAGDLATGIAYELFRRGHRIIMTELPVPLTVRRSVAMSRAVCEGSAVVEGMTGV LVTDIEEAQAVMDSGKIAVIVDEAADIRKEFCPDVLVDAILAKKNTGTSREDAPLVIAAG PGFTAGVDCHCVIETKRGHTLGCAIWEGSALPNTGVPGEVGGYSRERLIQASADGVMEQE AEIGDEVSAGQIVAVTGGKPVYAKMSGMIRGMLQSKAPVKKGMKIGDIDARLDRRYCVTI SDKARCVGAGAVRAAEQYYGTYAVVVLAAGQGLRFGGGKLLADVEGRPLYRHLFDTLAEL PDVWKVVVTGEKAIMEDAAKRGMAVVKNTQPERGSSRSMKLGLKACLDTLPNLRGVLFTV CDQPRLTAGTFVRLLRTAEQNPGRIVRASAGGRGGNPVVWDAAYAGELLAATGDRGGRPV MEKHAEEIILVEIEKEELHDIDRKADLTGEQ >gi|224461045|gb|GG657759.1| GENE 638 654389 - 656947 3057 852 aa, chain + ## HITS:1 COG:BH0748 KEGG:ns NR:ns ## COG: BH0748 COG1529 # Protein_GI_number: 15613311 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Bacillus halodurans # 169 842 15 740 760 353 33.0 1e-96 MYTLVVNGQTYEVTNDKRLIRFLRDDLHLTSVKDGCSEGACGTCTVIIDGKTNRACIPLV SKLAGKQIVTVEGLSDREKDVYGYAFAKAGAVQCGFCIPGMVMCAKALIDEHPDPSRLEA AAAIKNNVCRCTGYKKIIDAVLLSAKLFREEADVGEDKGIAPTGRAIQRIDARQKVLGTG EYVDDMYLDGMIYASALRSAYPRARVTAIHTKEAKALPGVAGVFTAADIPGSVKVGHLKQ DWDTMIPVGKETHYLGDAVCIVAAETPEIVEEAKKLVKVEYEELTPVLDPFDAMREDAPK VHSDGNILAHEHLVRGNADEVIQASRYKVTNHYETPWTEHAFLEPEAAVAMPFDGGVFIY STDQGTYDTQHECAMMLGIPREKVIVENKLVGGGFGGKEDVTVQHHAALVAYLTGRTVKV KLTRKESILIHPKRHPMWMDVTTACDENGYLTAMKAVVVSDTGAYASLGGPVLQRACTHA AGPYNFQTVDIDGRAVYTNNPPAGAFRGFGVTQTCFASEMNLNQLADMVGITPWEIRYRN AIRPGQVLPNGQTADASTAVAEALEALKERYDREPYAGIACAMKNAGVGVGLPDWGRCRL LVNAGKAEIHAGASCIGQGLGTVLTQIVSETAGLKLEEISYEQPNTSRAPDSGTTSGSRQ TLVTGEAARRAAEELRADLSEYGLKELEGREYFGSYLAKTDKMGSDILHPVSHVAYGYAA QLCALNEDGTVKLLAAAHDVGKAVNPVSVEGQIEGGVVMGMGFALTEQYVLENGEPKSKF GTLGLLKADKVPEIEPIIIEKPGVEAAYGAIGIGEITSIPTAPAIAGAFYKWNGQFQTKL PLSGTPYEKKKK >gi|224461045|gb|GG657759.1| GENE 639 657116 - 657964 1178 282 aa, chain + ## HITS:1 COG:BS_yvgL KEGG:ns NR:ns ## COG: BS_yvgL COG0725 # Protein_GI_number: 16080391 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Bacillus subtilis # 10 277 7 258 260 171 38.0 1e-42 MKKRSRILGVLMAAVLAGTFVSGCAGAGDADEKADTKEEKQETKTDGKEPVTILAAAAAS LEYSYTDELIPMFEKKYPYITVKGTYDSSGKLQTQIEEGLEADVFMSAAAKQMNALAEEA LVDKDSVVDLLKNKIVLITARDSDLDLKEFTDITKADSIAIGDPASVPVGQYSEESLTSL GIWDEVSAKASLGTNVTEVLNWVAEGSAQAGIVYATDAATTDKVKVVAEAPKDSLAEPAV YPAGIVSASSHKEEARLFLDFLKSDEAIAVFEKYGFTDNNAD >gi|224461045|gb|GG657759.1| GENE 640 658010 - 658687 676 225 aa, chain + ## HITS:1 COG:alr2433_1 KEGG:ns NR:ns ## COG: alr2433_1 COG4149 # Protein_GI_number: 17229925 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Nostoc sp. PCC 7120 # 1 223 3 223 223 175 44.0 6e-44 MDIAPVMISLKTAVFSIVFTFFAGILAAYLVVRIQNEKVKMVWDGLLTLPLVLPPTVAGF FLLYIFGVKRPVGSFFVEYFGVKIAFSWGATVLAAAVISFPLMYRSARGAFEQVDENLIY AGRTLGMSEAFIFRRVLLPNALPGVLSGGILAFARGLGEFGATAMIAGNIAGRTRTLPLA VYSEVAAGNMEGAYKYVLILVLISFLAVSGMNVAAGMFRKQGRRR >gi|224461045|gb|GG657759.1| GENE 641 658687 - 659700 949 337 aa, chain + ## HITS:1 COG:alr2433_2 KEGG:ns NR:ns ## COG: alr2433_2 COG1118 # Protein_GI_number: 17229925 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Nostoc sp. PCC 7120 # 3 315 25 334 378 221 39.0 1e-57 MGQIYARIHKEYKNFRLNMELSVPGQVLGVLGASGCGKSMTLKAIAGIITPDKGKAAVGE RIVYDSDRKIDLPPQKRKVGYLFQNYALFPNMTVYENIAAAAGKDKSLVKSLIRRFHLEE TQGLYPDRLSGGQQQRTALARILASGPEALLLDEPFSALDSYMKEELQMELKERLQEFGG PVMIVSHDRDELYRLCDHIMVMSAGENLICKGTKELFEDPEKMEAARLTGCKNITPAVRA GEREVEAKEWGVRFTLNRKIPERLKYIGIRAHDFRPAGADGQIRVEAVSVTDAPFERNVL FKNADCPRGTMWMKLDGRDGQIPERVSVREDKILLLE >gi|224461045|gb|GG657759.1| GENE 642 659706 - 660074 302 122 aa, chain + ## HITS:1 COG:PAE0813 KEGG:ns NR:ns ## COG: PAE0813 COG2005 # Protein_GI_number: 18312198 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Pyrobaculum aerophilum # 14 97 16 99 136 61 35.0 3e-10 MLHVEVKIKICGKEQVFGPGIAQLLTNVRKSGSVKEACGRMGMSYSKGWKIVNRAEKELG IRLIERQHGGKSGGSCQVTEQGLKMLERFESMEKELEGTAAEMFRTYFPEYEAERRTEAE TL >gi|224461045|gb|GG657759.1| GENE 643 660171 - 660923 823 250 aa, chain + ## HITS:1 COG:lin0656 KEGG:ns NR:ns ## COG: lin0656 COG5523 # Protein_GI_number: 16799731 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Listeria innocua # 110 211 65 164 345 80 38.0 3e-15 MWNRVELKMRGKQAFQYNYWPCVGAAFIMSVISMVFNSGGAGRSTQTLRQTTYYHDSTDL WNGSSYADTFSGGLPALGALFGAVAVMMALFGTLLMIFVGNVLEVGGKRFFVRNQTERVS VGTVLDGFRSGHYGNIVLTMFLRDLFTFLWSLLFIIPGIVKSYEYRMIPYILSENPGMSY KEAFAISKRMMTGQKLETFIMDLSFIGWYLLGGITCGIVNIFYVMPYVEASFAEMYSFNR AKAYGEGYIR >gi|224461045|gb|GG657759.1| GENE 644 660961 - 662658 1987 565 aa, chain + ## HITS:1 COG:CAC0887 KEGG:ns NR:ns ## COG: CAC0887 COG1001 # Protein_GI_number: 15894174 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Clostridium acetobutylicum # 17 563 15 569 570 447 43.0 1e-125 MELKEYRRCADVARHHEKAELVLKNANVVNVFTGEILSADVAVSDGKIAGIGTYEGEKEE DLGGKYLCPGFIDSHLHLESTLVTPAELIVQAAKCGTTTFIVDPHESANVAGEAGIGYIL EQTEDVPANVYVMMPSCVPATAVDDNGCEFTADRMRPYLGHPRVLGLGEVMDYVSVVGGD ARMHEKLGLFEGRTLDGHAPGLSDDDIQAYAMAGIGTDHECIDFEYALKERRCGMTILIR EGSAARNLDAIVKGIVERGTGTEGFCFCTDDKHIEDIQRDGHINYNVRKAASLGIPVIHA IQMATINAARCYGLRHLGAIAPGYQADMIVFDDLEKMNVLDVYHRGVKVARNGSGGVRAC PEELKHTVRLEHFSRESLRLLKPDGPYHVIQMQEGQIVTKDIVCEIPGKKEFTADREYNK IAVVERHKGTGKTGVAVVSGFNLSGGAVASSVSHDSHNIIVIGDNDADMELAVNELIRTQ GGYTVVENGKVYETLALPIMGLMSDAGYENVDKLLKKMIRKAHEMGVPETMEPFITLSFM ALPVIPELRITPRGLFNVKEFKLCE >gi|224461045|gb|GG657759.1| GENE 645 662724 - 663641 885 305 aa, chain + ## HITS:1 COG:AF1716 KEGG:ns NR:ns ## COG: AF1716 COG0657 # Protein_GI_number: 11499305 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Archaeoglobus fulgidus # 53 291 67 293 311 184 45.0 2e-46 MTINKSMRRVLKALSFDGIEVEASRNLANLKAIDPMKIFHKTIDYKIYNGEYEIPVRIYL PKEKVVDGLPVLLFFHGGGWVTESIDNYERICARMAADTDHIVVSVDYRLAPEYRFPTGL EDCYAVAEAIFTKRFILNVDPEQITIIGDSAGGNLAAAVSLMARDRGVFLPKKQILIYPA VNWDYSEASPFASVRENGSDYLLTAGKMRDYIELYLSCEDDKKNKYFAPLMETDYSDQPK TLVLTAEYDPLRDEGEEYGHRLRKAGNEVEIHRIKDALHGYFALGIKYYHVQESFELINN FLRED >gi|224461045|gb|GG657759.1| GENE 646 663646 - 665466 1663 606 aa, chain + ## HITS:1 COG:no KEGG:Clole_3204 NR:ns ## KEGG: Clole_3204 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 1 419 1 419 428 337 42.0 7e-91 MFQQKRAYWRNLDNAAKLFSATSSARDTRVFRFYCVLKENIDRDILQEALNRTIKKYPVF LSVMRKGLFWHYLERSELRPEVREEYKEPCSCLYVRDKKALLFEVTYFEKRINFEVFHAL TDGTGATEFLKELVGNYLSLAHGGERPAAADFKEAGPTVQDQENDSFLKYYSPDAKRKKK KKIRAYQIKMMKKEYGELQVTEGTVSVRELLAVSREKGVSMTVLMTAALMCAIHEEMTKI QEKKTVVLMVPVNLRKFFPSESMLNFFGWIEPGHRFGEGRDSFDEILNEVKKYFSDYLTK EHIAGHMNELIAFEKHKVLKWAPLEIKNRCIRAGAKLAEKEVTAVFSNMSAVKMPAEYEP YIERFGVFTSTPKVELCVCSYNDTLTFGFTSRYDSSNIQRNFFRILSELGADTEVEAPVY PQEVKPNYEGKKFFKYFSFCCIAAIVVGVMLNAIISPERRWAVFVAAGAFSMWLALAIGF FKRNNLLKNAMWQLLVVSIGCIIWDAFTGWHKWSVNFVLPAVCVIIELSMLIISKLQSHT AREYMIYYVMASAYSIFVPFILLLTKVITVTTPAVLCAGLSFLFLLALIIFKAREFKEEM QKKFHV >gi|224461045|gb|GG657759.1| GENE 647 665509 - 665688 307 59 aa, chain + ## HITS:1 COG:no KEGG:Closa_1280 NR:ns ## KEGG: Closa_1280 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 56 1 56 65 75 67.0 9e-13 MIDNSELPIGFTMELAMHSDILSEFASMPKAKQDEIVEGARKVKSREEMRSYVENIAVF >gi|224461045|gb|GG657759.1| GENE 648 665777 - 666544 811 255 aa, chain - ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 4 224 5 217 243 108 31.0 1e-23 MAKKKATESLYFIIQEDLKSKIRLGELKEGDRIMSESEICEHYNVSRITARRTLNNLANE GYIKRIPGRGSFVNYYALEMHTKKYYSLAEETVHWGMRPRSEYITQTFTLVKDLPEAAQI MEQLRITENDELYYVKRVRLSNDTPVAVDCTYVPTASLTEDERAKFAENQAAHVYSIDAK MRGALNRVSETFTAVALTTEDASCLNVAAGTPALRIDRITYARDSILEYNVRLRLTYRCD YSIAYKGIEPRELSI >gi|224461045|gb|GG657759.1| GENE 649 666759 - 667961 1212 400 aa, chain + ## HITS:1 COG:AF0367 KEGG:ns NR:ns ## COG: AF0367 COG0477 # Protein_GI_number: 11497979 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Archaeoglobus fulgidus # 7 393 2 392 397 170 30.0 5e-42 MQRLKNGSRYMALAGGIIVQIFVGIIYIWSIFQEPVIEYFNWTHSGAALTFSVMLPMNVL GVTAGGILNDRKGARFVLHTGGILMTAGLLLSSLIPKGQPWLLYIFYAGMGGFGGGLAYN ATVSCAQKWWLDRKGLAGGIIVCAYGMSTVVFTPVVNMLLGENGVGVKNTFRILAAVFAV IVLTVGWFVVNPDEEYMDNCVKDSKEWIGKKQYKPGDVLRSGKYYMVLICLLCLTPAYLM LNPMIKSLGELRGLSEEIAVISVMITGLASALGRLTAAWLSDKIGCKRVLLMLYTITFVS ILLLWNIHGNMFIVLIALITYAYGGCAGVTPVLATDFFGTKYMSSNFGLVMISVMISGIA YPTLGTAVSPAGIPAAQVFLIPAVLCVAGFVTLHFLYGKD >gi|224461045|gb|GG657759.1| GENE 650 668123 - 668956 229 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 244 4 237 242 92 30 7e-17 MGRVDGKTAVITGGGSGFGQASVLTFAGEGANVVVVDISEANGTQVTEKVKASGGEAVFV KADVTSEKDWENVRDTALKTYGQIDILFNNAGICLMPENADIAHVDMSIFDRTMDINVRG VWLGVRTMAEELVKSKGYIVNTASVAAFKGPLGAAAYATSKGAVVAMTYAIANELGLWGV RCNCISPYAADTPIGANVPVEMVRKARTGNPLYTTIDPYDVAKTALFLTSGECRCINGSN YFVDAGAVTMTQPCSIKDFVDANAKYYEGAECTHTFE >gi|224461045|gb|GG657759.1| GENE 651 668977 - 669429 489 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568516|ref|ZP_03777541.1| ## NR: gi|225568516|ref|ZP_03777541.1| hypothetical protein CLOHYLEM_04593 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04593 [Clostridium hylemonae DSM 15053] # 1 150 9 158 158 301 100.0 2e-80 MGCKFEHIGILVKNRELAVTSLQQMPGADEAVYVDKMNFDETCVQVGAPFAIKGANITVG GVEYEIIEVVPEESRGSYMMNRLAEYGEGLHHIAFEYDDLEEFNEAAESLIRQGYIVGHK ASIPFMGKTAHVYYLDCPFGGLTYEIKCMV >gi|224461045|gb|GG657759.1| GENE 652 669448 - 670410 1301 320 aa, chain + ## HITS:1 COG:mll3407 KEGG:ns NR:ns ## COG: mll3407 COG1879 # Protein_GI_number: 13472950 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 36 318 25 315 325 92 30.0 1e-18 MKKRILSSVLMIALMTTLILGGCGTKSGDKKEDNTKDKKRTIACIVGNQTMDFFVNISKG AQDAAGEGDEVLVYSFDDDANKQSQIFEDCITKKVDAILTTILDSEAIITSLRKAEQAGI PVITMDAYPDGKGVEDLYAAAVLDDLYQAGHDHGVALCEAIGGKGKIGWVWYTGASEVAK QRCEGFKDAVAEYPDVEIVAYSEGSVDTESCLSQISAQLQNYSDLDAYWAPWANAGMAAV TALASAGMSDVRLAISDCNEDLVKYVLDGKVIALMDLNARGIGEKAMELACEYLDKGKVS EQINYVEVINVDESNIADYQ >gi|224461045|gb|GG657759.1| GENE 653 670549 - 672045 200 498 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 263 473 40 248 329 81 26 2e-13 MEHIVKSFYGVNVLKDVSLYLKEGEIQALMGENGAGKSTLMKILGGIYSKDSGKITVNGK EVEIKTPLAARELHICLVHQEISLVPQLSIADNIFLGSELKRGLLEDKKAMREKAREAIE TLELRIPVTTKVYKLSVAQQQLVEIAKALVFDAKIIVLDEPTAAISEKEAESLFVYLKKL KEKGISIIYISHRMEEIFRVCDSITIMRDGLVVSNKRAEETDKSEVISAMVGRSITDFFG DNHPQGTEDILEVKGLNNRYLKNVSFTLKKGEILGFAGLVGAGRTELARAIFGLDKADSG EIFLNGKKINCSKPYEAMKCGIGLIPEDRKQSGLFLEKSISYNLTLLVLRKFIKGIFVND KKRNEIIREYSEKLSIKMAGVEQHCAQLSGGNQQKVVISKWLAYGPKVLIMDEPTRGVDV GAKAEIYHLINDLANEGYSIIMISSELPEIINMSSRIVVMHEGRITGILDGKETEFVQEE IMNYAIGGKVDEKYENEK >gi|224461045|gb|GG657759.1| GENE 654 672020 - 672997 871 325 aa, chain + ## HITS:1 COG:SMb21375 KEGG:ns NR:ns ## COG: SMb21375 COG1172 # Protein_GI_number: 16264701 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Sinorhizobium meliloti # 20 317 15 312 320 194 40.0 2e-49 MKSTKTKNENRLTIMLKDFIKTNGGILIALAAMFLFLSFANQYFFTSNNMANLFNYFTTN CVLAMCMMCVLITGEIDLSISSFVALSGIVLCVFLNRGMSFGISLLLTILIGALVGILTG TVIAFSGMPSFIVTLAMQGVIRGSAYIISAGERISSADEWLFNLTSKRYLGVPLPTIIIL VIAVLLGLLLYRTSFGKHMYAAGGNREAAIYSGINVKKIVIVTFAISGALACLAGSFVAS RVTSGQPSAGAGYEGDAVAAAVLGGTAFTGGRGTVSGVIIGALVIGTLTNGMNLLEINAY WQQICKGLIIMLAVMIDTVKQRRSN >gi|224461045|gb|GG657759.1| GENE 655 673015 - 673848 726 277 aa, chain + ## HITS:1 COG:YPO3838 KEGG:ns NR:ns ## COG: YPO3838 COG5564 # Protein_GI_number: 16123973 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme, possibly a dioxygenase # Organism: Yersinia pestis # 10 266 22 278 280 104 26.0 2e-22 MTDHLKNRAAQHKFILGVSAGIPLTAKIAHGAGADFIVTHKEEIFGADGRMPVIARTGYG GNCNEIIMEQADRYVSAAGDTPVFAGIGPAEPYTNVDRFTEKLLEKGVTGITNYPTAGGW VGSYGNGIQMAGVGYSLEVDYLRRWSRKGVPAIGYCFNTEQIKQMTDAGVEILSLYIPRT EKETHGWDDAPSAEKAAEAAAELVETARRENKNSVILCSGGTIRRISDIHNYLKSAAADG YICDESVECAAIDRAVSETVGGYRRLETCLRREGGQR >gi|224461045|gb|GG657759.1| GENE 656 673845 - 674624 757 259 aa, chain + ## HITS:1 COG:mll9387 KEGG:ns NR:ns ## COG: mll9387 COG5564 # Protein_GI_number: 13488176 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme, possibly a dioxygenase # Organism: Mesorhizobium loti # 1 248 7 270 285 110 24.0 2e-24 MKRYSREEIMDHLQQRIKNREPIIACGAGTGLYARAAERENADFILAGARSKALVNGLAA EECVFPFHDVNEVSCELAKHLLPVINRTPVIAGIGAYNPYLDAGRLIHNIKKLGYSGVIN SPGSGAYAVQLKQNCFQKEIELIVKAREENVFSMAVVRTTKDIACMCEAGADVIVIQCQE TAEDCEEYISYQSRLARSAYELSKELIVLADIGNLTNEKEIQRLLTETKAAGIVSEEAVE SLAVQKEMSKVLREIMNVQ >gi|224461045|gb|GG657759.1| GENE 657 674643 - 675476 851 277 aa, chain + ## HITS:1 COG:YPO3838 KEGG:ns NR:ns ## COG: YPO3838 COG5564 # Protein_GI_number: 16123973 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme, possibly a dioxygenase # Organism: Yersinia pestis # 4 274 7 279 280 183 36.0 3e-46 MGSKFTRQEVLDRLNRKRAEKKPIIIGAGGVGLIAKAADKAGIDIIMSYCTGPVRMNGNA GQLGYMQYVDCNGISLEMGHKIIGRVKDTPMVAGIGVGDPYRDIDDLIDELTGIGYSGIT NVPTLGGHSGALRKSMEREGIGFNGEVKLIQKCRGKNIFTIAYAFDEEQVKAMVQAGTDI ICPHVGVTRDKAFDFNVLTVEQAAEKINRLYDVAVKENPDVIVACHGGPFADPESVQKGF RLTKADAFVGASTVERIPTEEAIYEVVKEFSSLTLGK >gi|224461045|gb|GG657759.1| GENE 658 675492 - 676706 985 404 aa, chain + ## HITS:1 COG:SMa1334 KEGG:ns NR:ns ## COG: SMa1334 COG5441 # Protein_GI_number: 16263182 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 393 1 386 398 200 37.0 4e-51 METIAVIGAFDTKGTEFEYLRKKIEEYGAGTLMIDVGVLGEPEFCPDVAAAEVAYLSGEK LESLRRQRNRKKANDAMIRGIKALVKKLYKENRIQGAVSMGGGQGTHVAAAAMSVLPAGF PKVILSTVATVPHAQSHFENINDTMVMNSLVDIQGLNYLLRTVIRETAAAIAGLARHAEE PCKTEKEKRIAMSMFGITTPCVSRIQKRLEKSGCEVLVFHTTGMGGRLMEKTIQEGHIDG VVDVTLGEITSDVFGLPGGAGKERLCAAGKKGIPQIVIPGAMDVLNFMPPESMPQAYKDR KYLMHNEDLKVVRTNAEENKILGEETARRLNSSSGKTAVIFPLRGLSSNDQEGKEFYSPE ADRELFDAIRTNLKPGIRVIELDCHINDPEFADFIADFMVEEML >gi|224461045|gb|GG657759.1| GENE 659 676703 - 677545 703 280 aa, chain + ## HITS:1 COG:YPO3838 KEGG:ns NR:ns ## COG: YPO3838 COG5564 # Protein_GI_number: 16123973 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme, possibly a dioxygenase # Organism: Yersinia pestis # 1 275 5 276 280 180 36.0 3e-45 MKQMERKEILKRLTLKIKAGKPVIAGGAGLGIVAKMQETAGIDMIMAYNTGPYRMDGVPS FVGHMPYGNCNRVTLELVDILANRLTDTPVIAGAGAGDPFLDIPYHIETLCRRGASGITN VPTVGGKKAGALKGPVRDDMEWNGFGFKREAEMIRYCRKRDIFSVAYAFDEEQVRTLVQA GTDIIAPHVGGTAGGMTGFEAVSVEEAADKIQRMYMAAVQENPDIIVLCHGGPLKDAKTV EECMKLTDIHGFIGTSALERIPVENELTKIVSAFKATHLR >gi|224461045|gb|GG657759.1| GENE 660 677557 - 678429 447 290 aa, chain + ## HITS:1 COG:YPO3838 KEGG:ns NR:ns ## COG: YPO3838 COG5564 # Protein_GI_number: 16123973 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme, possibly a dioxygenase # Organism: Yersinia pestis # 1 231 5 234 280 157 35.0 2e-38 MRQYAREELIQSLQSKIRKKEPVIASGAGAGIVASAGEKAGLDLLIIYSTGLFRQAGAPL LTTMLPYGNCNDIVSALGKKVIFRTVDIPVIGAIGAADPFKSWDLIIDGLQETGFSGMIN YPVFTGIDGFADDLEDSGIGFSRNVNLIRKCRERDFFSASFAFEEAQAEMLAAAGADMIC AMVGGTAGGTNAIKENKVRSMEESCRIIQNIYEAATSVNPDIIVTCRGGPIVEGRRICSA ASIIRMYRGLSGAPVSNGSRWSARSFMQQKNFLALTHKLGGRGWESEELI >gi|224461045|gb|GG657759.1| GENE 661 678405 - 679229 503 274 aa, chain + ## HITS:1 COG:YPO3838 KEGG:ns NR:ns ## COG: YPO3838 COG5564 # Protein_GI_number: 16123973 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme, possibly a dioxygenase # Organism: Yersinia pestis # 4 268 9 274 280 156 32.0 4e-38 MGKRRIDIRRRMSERIKRHRPVQGVCVSCGLTARAAEKAGADFLVTYAGAMFRREGVPAS LCELCYDDCNTVTEELGSHILPRLKDIPLIGGIGCLDPYRDVGQFIDHLIAKGFSGVANL PSIGDWEGDYRTMPEQLHMGYEKEIELIRTCRGRDIFTLANCYTEEQAVKMTEAGADMIC IDMGATQGGLLQSSCIVTCTEAAEKISKIADCVHACGESPFILFHGGPFAEPVDMNVCLQ GGAVHGVLNGSAAERIPVERAVMDTVAQVGALRL >gi|224461045|gb|GG657759.1| GENE 662 679258 - 680472 1232 404 aa, chain + ## HITS:1 COG:mll9388 KEGG:ns NR:ns ## COG: mll9388 COG5441 # Protein_GI_number: 13488177 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 1 392 7 395 408 204 36.0 3e-52 MKTVAVIGALDTKSDEFLYLKTRIEQEDVRTIMVDTGILGSPKFRPDISAAMVAREAGED LEEMRREQSRQKSNDTMLKGAGLIIRRLYGEGKIDGAVTMGGGRGTIVGGEVMRSLPVGF PKVLVSTQATNSYAQHMFEGINDTFVINSLVDISGLNEILKMVMDKAAVTIAAMVKMEQA ALKKTRPRIAMSMLGITTPCVSAVQRRLEQAGFETLVFHSNGLGGTCMEKMIRQGWIDGA ADITTAELTPGELGGIGYAGPERLTGAADMGIPQVIVPGAMDIIDFAPPESVPEKYLNRR YVMHVSALKVVRTSAEENRHMGKLMAEKLNQSRGKVVVAFPMRGLSANDHEGAAFYDREA DMALLETLERNLREDIPVCKYDFHINDEAFAEEVAKLVLNVMRR >gi|224461045|gb|GG657759.1| GENE 663 680540 - 681304 853 254 aa, chain + ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 246 1 240 240 115 31.0 1e-25 MANKKRSQSLYFKIKDDLKEQIISRQLKADDRIMSEAEICEHYKVSRITAKRALDELMWE GYITRKPGKGSFVTYHAIEHLLNGFYSISEEIRRNGLIPSVKLLEFLVLKVEDTVVSEEL KARLGLSGSDGVYYIRRLRLASDEIIALETSYIPAQDFPGLVETDLQRGAALYAVLQARY GCEPDRSQELFSAHMVSKKEAQALGVRPESAALKVVRISYAADRPVEYTERLFRGDTYTY KVELKKHKTAGENE >gi|224461045|gb|GG657759.1| GENE 664 681398 - 682171 604 257 aa, chain + ## HITS:1 COG:TM0689_2 KEGG:ns NR:ns ## COG: TM0689_2 COG0149 # Protein_GI_number: 15643452 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Thermotoga maritima # 9 253 6 253 255 179 40.0 4e-45 MEYMKTNKIVIGNWKMNKSIRESAACAKELLDARYDLTSVKSTDIVLTPSFLALNEVKKV CAGRNGISLGAQDVYWGTGNYCGAVSAKMLSEVCSYAFAGHSERRMHFNDTDEIVNRKVK ACIEAGITPIFCIGEDEEANNAGKTKEVIRRQIESGLAGVRPCEMVVLYEPVWALGTGRT PCTEDTEEIMRFVREILHELFGAGAGRGIRAVYAGSVRPENAAAYARLPHVDGVAVGTAS LSAEKLAAIIHAVDRAV >gi|224461045|gb|GG657759.1| GENE 665 682385 - 683470 1425 361 aa, chain + ## HITS:1 COG:YPO1507 KEGG:ns NR:ns ## COG: YPO1507 COG1879 # Protein_GI_number: 16121780 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 10 361 8 335 335 259 45.0 7e-69 MKKERVTRLLAAGLAVMMVAGMATGCRKSDSGSSDGDKDKKEASSDVLIGSAIYKFDDTF MTGVRTAMTDQAKESKVELELVDSQNKQATQNEQVDTFITKGVNALAINPVDRTAAAPII EKAKAKDLPIVFLNREPEEADMQSYDKVWYVGAKAEQSGTLSGEIIADFFKAHPEADKNG DGTIQYVMLQGEPGHQDATLRTEYSVKAIEEAGFKTEKLAADTAMWDKAKATDLMKAFIT GQGLDKIEAVLCNNDDMALGAIEALKAEGYNKDSSDLTKYIPVVGVDATAPALEAMKEGS LLGTVLNDADNQGKATVNVAVAAVNGDEINEENVGYPITDGKYVWIDYVKVTEDNYQDYM K >gi|224461045|gb|GG657759.1| GENE 666 683545 - 685044 1518 499 aa, chain + ## HITS:1 COG:mglA KEGG:ns NR:ns ## COG: mglA COG1129 # Protein_GI_number: 16130087 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli K12 # 2 495 10 503 506 535 54.0 1e-152 MGEYVLEMNNITKVFPGVKALDNVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYHEDGG EIILDGRPEKIMTSKQALDLGVSMIHQELHPIRFRPVMENIWLGRFPMRGIAVDKKAMIE KTKELFKEVDLDINPEVLAGTLSASNLQLVEIAKAVSYNSKIIIMDEPTSSLTDNETQHL FKIIRQLQEKGCAIIYISHKMEEILKIADEVTIMRDGQYVGTWDAGELTTDLIINRMVGR DMTNRFPPKEYSPLKETVLKVEKLSSPLPKSFQDVSFELKKGEILGIGGLVGAQRTELVE AIFGLREIVSGQIEKDGTPLRIKSPRDAIRENIALLTEERRATGIFGILSVMDNTVIVNQ RAYAHGGVLRDRERLKAAEASNAELRTKTPNMDEHMENLSGGNQQKVLLARWLLTDPDIL ILDEPTRGIDVGAKYEIYTIMHKLVKQGKSIIMISSEMPELLGMSDRIMVMCEGRVTGFL DAKEADSVQVMNYATKFMK >gi|224461045|gb|GG657759.1| GENE 667 685074 - 686303 1731 409 aa, chain + ## HITS:1 COG:VC1328 KEGG:ns NR:ns ## COG: VC1328 COG4211 # Protein_GI_number: 15641340 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Vibrio cholerae # 81 409 12 336 337 256 49.0 5e-68 MQNKGKVVARDKYGVTFIGIGIAAVVLGLVLYYFLDPGVFYDLGLYVIMVGAAALIYGLR QRFARQYKGIAVELSANTGKRFLTNNAIMIALLLMIIVIMIIQPRFMQLAVLLDILTQSS TKMIVALGISFTLLIAGTDLSAGRMVGLAAVVSTSMLQTADYANRFFPDLPHMVLIVPII VAVIACSLFGILNGFLVAKYDMHPFIATLAVQVIVYGANSLYFDMEPNKSQPIGGVRPDF VLLGQKKLFQIGDFPGISVLVPIAIAFVILIWFILNKTVFGKNVYAIGGNREAAIVSGVN VFRTIMCIFILASVLYGVAGVLEAARTAGATNNYGNGYELDAIAACVVGGVSLNGGVGKV SGIVSGVLIFTVIQYGLQFIAVSPMWQQVIKGIIIAIAVAIDLSKYRKK >gi|224461045|gb|GG657759.1| GENE 668 686413 - 688047 1814 544 aa, chain + ## HITS:1 COG:BH2109 KEGG:ns NR:ns ## COG: BH2109 COG4753 # Protein_GI_number: 15614672 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 4 540 2 523 525 196 26.0 1e-49 MEYYKILLVDDELEIRDGMIQKLDWHKLGYDVAAAAENGVEALEKAEQVQPDVIMTDIRM PFMDGLEFIGKVIELRPAVKIIVFSGFDDFEYAQKAINLGVEEYILKPVSARQLEQSLVR LKSKMDEELEQKRNIDLLRRSYEDSFPILKEQFFVSVIEGRMLPRQIEQWLNQYKLSFVS RYKVVAVLSAGDNSFPGGRKNDFAGSEELIPIAVRKTAEDIVGKYHELHSFFYSNYIVLV VALEWESQISLLCQEVNEACREGCRITSSDVTAGIGGIYTRWEELKYSFKEAENALEYST LLRKEGRLAAYIKDVEPEDTTSRLQLEEQDERLLLNAIKGNNCDKVRSQIERFFARLEQA SLPFYQYQMYIMEIFTVIMKLVNVYQLDTKAVFDGETNYISAVLGLHSLEEIKNWFITTC GRVSRLIQKERTDTGEKLIEKAKQYVEENYTDAELSVESLCDNLHISPAYFSTIFKKETG VNFISYLTDMRMEHAMKLLDTTDDKTYMIAAKSGYAEPNYFSYAFKKHVGMSPSKYRKRL EEQD >gi|224461045|gb|GG657759.1| GENE 669 688091 - 689875 1771 594 aa, chain + ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 42 581 44 591 602 244 30.0 4e-64 MKSIYQKRSLQFILSISFTLVSVAVMIGVAAGFSQRFVKSTERLAISNNKNVLDQMNLNL DNYLHNMMSISNTLYYSIIKNVDFGKDSASYVGSQMKLLYEANATSLVSIAIFSDEGELI AAQPLSRTKQNVDPVTAEWFIRANKQIENVHFSTPHVENLFINSDNIYHWVVSLSRSVEM TKDGEIVHGVVLVNMNFTGIEQICKNVDLGESGYVYIVDRSGELIYHPKQQLIYGGITSE NNKKAAQYSEGSHIETFQGKERQITVKTVGYTGWKIIGVSPTADITSQYMQNSQFIWIVA LIGVIILVFVNMVISSRVANPIKQLERSVRKLERNNLNAKVKIGGTYEIRHLGKTLQSMA DNMKKLMDDIVKEQEDKRKSEMSALQSQINPHFLYNTLDSIIWMIENERYEGAIDMVTAL ARLFRISLSKGKNIITVEQELQHAENYLIIQKVRYKNKFDYDISMEKNCAQCATIKLIIQ PLIENSIYHGMEYMDGDGRIYIRAYRKEDTLYIEIEDNGPGMTEAQVEELQNGTLRSSKG KGSGIGFQNVRERIRLYFGQQYGLDVESEPDEGTTVRIRLPATTIDKLEIGRGD >gi|224461045|gb|GG657759.1| GENE 670 689877 - 690848 995 323 aa, chain + ## HITS:1 COG:no KEGG:Cbei_4429 NR:ns ## KEGG: Cbei_4429 # Name: not_defined # Def: periplasmic binding protein/LacI transcriptional regulator # Organism: C.beijerinckii # Pathway: ABC transporters [PATH:cbe02010]; Bacterial chemotaxis [PATH:cbe02030] # 26 323 25 326 326 159 33.0 2e-37 MDRRKRYILLAAAAVMLFTAFIFGWNNSIRNDENHIYQISYIYRNSSIEESQQAVRQGIE QAAKDYKCEVTAVAFEPAISPTEQLELVSREVKNGADAVLIEPLNSEEAADGLAGVQKKI PVIQVNTWFESDGGSMPSVHIDNYKMGKELAQKIVKDMGAAKQVLLVKSEMEYTDVYETY RGVKEYLERAGVGIKETTLSAREAGGAGMVPGALKTTDADAVAVFGTMQLELCGKLKKEN TALSHTKIYGFGKSNQIISYLEEEMIQAIGVPNEYSTGYLGVMKAVSGIKGDRQEDKNID YSIIERDNIYTTKNQRLLFPFVQ >gi|224461045|gb|GG657759.1| GENE 671 690888 - 691919 1194 343 aa, chain + ## HITS:1 COG:YPO1507 KEGG:ns NR:ns ## COG: YPO1507 COG1879 # Protein_GI_number: 16121780 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 338 8 332 335 213 37.0 4e-55 MAGVCLAGLLTLTVAGCAQNAERDKKDTIKIGVAIYRGDDAFISSVSSSMEEAVKEKEEE LDRKIIVNIADAKNSQGSQNDQVDDFISKGYDVICVNMVDRTAAAVIVDKAKEAGIPIIF FNREPVEEDMGIWDQTYYVGTDAKEAGELEGQIVADAFKAAPEQIDKNGDGKLQYVMLEG EQVHQDSLIRTEYSVKTILKEGIPTEKLASGTGNWMRSPAYELMQEWIKEYGDRIEAVIS NNDEMAMGAVEALEENGMTGSSGPIVVGIDGTRDGLEKIVKGEMIGTVMNVAQKQAECMV EIACYCAQDENPKGQVEYLNGRYVRIPHYIVTADNIDEVINDK >gi|224461045|gb|GG657759.1| GENE 672 691946 - 696178 4054 1410 aa, chain + ## HITS:1 COG:RSp1178 KEGG:ns NR:ns ## COG: RSp1178 COG0642 # Protein_GI_number: 17549399 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 963 1393 244 654 676 196 35.0 3e-49 MRKDILSMDQQAAALDNAPVAVFVRAASGGRLLYANRLAEELFWQKPESGGELCPFCCTE DMNESGFSVREFHCSMDDRIYQFSGRNIDWAGQPAQIEYIVDITDKKREEEHFRALEEEL KASNDKMQDIINAIPGGVAIYKVSDIFETVYFSDGVPELSGYSVEEYKELVKGDAADMTY REDKDMVVSKAREVIETRGLTSFEFRKQHRDGHIVWVRVQIKWIGEEDGCPLLHCVFHNI SDIKEAQLEMSHIVNSIPGGIASYQVVDNRFVPTFYSNGVLELSGHTREEYEDIIQDNAL NVIYEQDRQRVLEAAASALISGEVLDVSYRMRHKDGNLIWVHLNGRRMGPLAEVMRFYAV FTGMSAETRIFQEMANETADGIYVISKETYELLYVNEAKDLFAGKNDCIGQKCYEALHGR EKACEFCTLGKYEPDGEEHDMAVPGSGRYYSTRFRETDWNGIPAYVKFVRDTTEEVRTRK EKERLEQYFQTVLSNLPGGVVVVHYEKDGSMTPEFLSDGFAAMTGMTTDEAWQLYREDAM AGIHPDDCAYVKEQMNEYIASGASSWEIIYRLKKGSGYVWVKNTLSLIENEGGERRIYTV YQDMTKILKEQEQMRRQYQEMLMKHYHTPGADTLILGHCNITQNEILEIDDYTGLDILGT FGAVREEFFTGVGSFIVDEEERKQFYGTYLNRPSLEAFERGETEQKMDCFVKLPHEEKGR YVRFKMNLVATPDSGDITGVLTVTDSTQETVRDRIMYQLSASGYDFIADLDVTEDRYVIL SCSEDASSVPPGEGCHSKWTEEMLQNRVVPKDRERFRRNLDTAVMLKRLGKGRSYTFAYS VAEENGDIRTKTMTVSAVDLRIGRVSLSRADITESVREQQAMLRVIAYTFELAGFIDIGT GSFTMYTRETVLENLQPHFVADYSSALLQFVKRYGLQEGEEELYNCFRTETMKKKLEEKP NGYDFLFPYRQDGGERYKQINVMWGDINHSTVCLVQADVTDMLAAERKNKKALENALVLA EEANRAKSDFLSTMSHDIRTPMNAIIGMTTLAVAHLGDSGRVADCLNKISISSRHLLSLI NDILDMSKIESAQISLNRMEIYLPDMLEKLSAIIAPQAGEAGIRFDIRTEGIRHNYFYGD ALRIDQILINILSNAVKYTREGGSVMFAAEEIPSVRQAGWLRYRFTVSDTGIGMTEEFLE HIFDPFARSAGTQRIEGTGLGLSITKGLVDLMGGEISVQSTPGEGSCFQVELECESAKEA EADRKAERKAPGADASDDKLFEGRLFLVAEDNEINAEILCELLSMYGAETVVRENGRQAV QAFLDAAPGTYDAVLMDIQMPEMNGYEAARAIRQTDRDDAAVIPIIAMTANAFSEDVKAA GESGMNAHVAKPVDVEMLRETLKEVMGRTK >gi|224461045|gb|GG657759.1| GENE 673 696278 - 696949 436 223 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 5 218 6 215 229 81 27.0 2e-15 MNQYVTLLENTELFSGINAQEIDAMLGCLSAKTKTYNKNCYILRAGACVHSIGMVLSGSV LIVKEDFWGDRSIISEILPGAIFAEAYACLSQMPLEASVVANTDTEVMFFDVRKLLTVCT SACSFHTRIIQNLLSAVSAKNVELTRKIEHLTKRTIRGRLLSYLSAESLKCGRSTFEIPF NRQQLAEYLSVDRSALSGEISKLKAENIIACKKNTFTVYKNIP >gi|224461045|gb|GG657759.1| GENE 674 696952 - 698409 520 485 aa, chain - ## HITS:1 COG:no KEGG:ELI_2456 NR:ns ## KEGG: ELI_2456 # Name: not_defined # Def: transcriptional regulator # Organism: E.limosum # Pathway: not_defined # 8 480 8 479 483 121 23.0 7e-26 MENSTELRKVVYNVLLTQIQFGTYRYGEKLPNIEETSSLLCVSVDTARAAYLKLRDGGYI TLSKNVGATVSVKLSTQETEQFVQIFFSMRKHAIFDLAASMFPLFGNVQWNGLKNASSET LQAMDRLSREVSTSAPYAILTNINQKYSALGNALLMRLVWQSSMFLHVPIFSFTDNLQYF EPSADYLPAVMTLCRNKDWPSLRAEVERTMKRLSFALNRFYETRITAPPAEEEITFAWSS YRKNQQLCYSFAMELLLSISQGKYPVGSLLPSQKELAARKGISLSTVRRAFDLLYSVGAI KSAKYVGTKILPFDKTTENSDFTNPVLRRRLIDMTESLQILALSCREVSLLTLSSLDGAS VRQLLRELDSNRKRQRGETLSYFILKSIAELAPLQTIRTVYSELLLQFFWAYALRGMEGS QEYINRIYAPYFDALAEALQKEDYLRFSAALEELIIYELRSTVNYLSQLGFPEMENILIP DENRN >gi|224461045|gb|GG657759.1| GENE 675 698444 - 698602 136 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568540|ref|ZP_03777565.1| ## NR: gi|225568540|ref|ZP_03777565.1| hypothetical protein CLOHYLEM_04617 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04617 [Clostridium hylemonae DSM 15053] # 1 52 1 52 52 96 100.0 5e-19 MVALSIAFFHPGFHKIPSAVYCCYFVRDLLYFNIYVCEQLENLKSISADEEK >gi|224461045|gb|GG657759.1| GENE 676 698616 - 701246 2578 876 aa, chain + ## HITS:1 COG:slr2098_3 KEGG:ns NR:ns ## COG: slr2098_3 COG0642 # Protein_GI_number: 16330584 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Synechocystis # 333 590 20 274 280 180 39.0 1e-44 MQNTVKNKELSVGKSQRMSIVSTAVLILLMLSYLVMTISNSTKLAAQTEIISNHPFEVVI CADDVKLYVSEMSLRTGRLERHHNSDDVEIAAGKLEELYQSLKEPVAHVEKLYLGDAEDV QELESTLALLQTEQNVYLEFCLQPGLTEEKIEAYTREHLQPLYDQAVHQAEHIISTAQEK KVGYGATAETLRISSLIGSVLLMGLMIVVLLVSQYVLHRQRKELVYRSKLFDCLSLSIDD AFIIRDADTGAIIYRGLNLERILGIPMVDMESLYQGLKEEDARIFKEDYNAVQSASPYEK LVEYTRPDKEKRWMLVRIYRVEDMNAPQLITVFSDRTEEVCSRQALQEAMLAAENANAAK SEFLSRMSHEIRTPLNAVIGMTTIAAASVSDPARVEDCLTKITFSSRHLLMLINDVLDMS KIESSKMALQNEPFDIFEIVNGFVSTVYAQAKSKDIVFEETMEGFGKDTVFIGDSLRLNQ ILMNLSSNAVKFTPPGGSIHLDVSRYKKGNQADVIRFVLKDTGIGMTKEAVGRIFQPFEQ ADASIAKRYGGTGLGMSITRNLITLMGGQIQVESEPGLGTAFIVDLPFEKGEENQMPEPD FGQQKLRALIVDDERQVCEQTAVLLEKIKIDAQWRQSGAEALERVKESRREGQDIDLCLI DWKMPDMDGVEVTRRIRREVGNDVPIVMISAYDISEVEEEARAAGVNGFLPKPLYRSSVY AAVKAAMDRKMPRPADAEYKSADKPLNGIHLLIAEDNALNQEIAAALLRMNGAAADCVDD GRQAVDAFLASKPGEYDAVLMDVQMPVMDGYEAARRIRTSDHPQAGTIPIIATTANAFSA DVSSALAAGMNAHVSKPLDVTQLCRTLLDCIRRADD >gi|224461045|gb|GG657759.1| GENE 677 701533 - 702147 263 204 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568543|ref|ZP_03777568.1| ## NR: gi|225568543|ref|ZP_03777568.1| hypothetical protein CLOHYLEM_04620 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04620 [Clostridium hylemonae DSM 15053] # 1 204 1 204 204 372 100.0 1e-102 MSDILQRDGLTIELLGRLSYKSNLGINLKKNLHYFDKEKLFEELIKVNEWYDSYDELYEL ALDYRIKSIQSAILKYERYYPDHQTRKVFDDMLGFRSLCDNYEDVLTLKGIPELRVADMS KGKANDDGYRGIHVYFQLDGSHYPIEIQYNTYYDRQFNNWLHKYVYKKKYDNSVGCHLRE LYEGAKILTEKDFKEALEHVLFSS >gi|224461045|gb|GG657759.1| GENE 678 702128 - 702352 214 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568544|ref|ZP_03777569.1| ## NR: gi|225568544|ref|ZP_03777569.1| hypothetical protein CLOHYLEM_04621 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04621 [Clostridium hylemonae DSM 15053] # 1 74 1 74 74 129 100.0 5e-29 MCYLVAKHVGEVGSVALKTTHGKHLSEFKRSIEEKVGYEKIQLVTISRPSAYGEYEPYYF ADTEEEFEKLVINM >gi|224461045|gb|GG657759.1| GENE 679 702496 - 704478 2117 660 aa, chain + ## HITS:1 COG:BH3595 KEGG:ns NR:ns ## COG: BH3595 COG0556 # Protein_GI_number: 15616157 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Bacillus halodurans # 4 654 5 657 660 876 67.0 0 MDHFNLVSEYSPTGDQPQAIEALVKGFKEGNQCQTLLGVTGSGKTFTMANVIQQLNKPTL IIAHNKTLAAQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIAKDSSINDEIDK LRHSATAALSERRDVVIIASVSCIYGLGSPIDYQEMVISLRPGMIKDRDDIIRKLIDIQY DRNEMDFKRGTFRVRGDVLEVIPAMNDCDVIRIEFFGDEVERITEVDALTGEIKNELNHI AIFPASHYVVSKESMERAVKEIEVELEEQIQYFKSKGKLLEAQRISERTNFDIEMMRETG FCSGIENYSRHLTGLAPGQPPHTLIDYFPDDFIMMIDESHKTVPQIGGMYHGDQSRKSTL VDYGFRLPSAKDNRPLSFEEFEGKLNQVMFVSATPGRYEAEHELLRAEQVIRPTGLLDPE VEVRPVEGQIDDLVGEVNREVAKKNKILITTLTKRMAEDLTDYMRELGIRVKYLHSDIDT LERTEIVRDMRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSEVSLIQTIGRA ARNSEGHVIMYADKVTDSMRLALEETKRRRQIQMKYNEEHGITPQTIQKAVRDLISISKK VATEEMRLEKDPESMSRKELDKLIKEVTKRMKTAAAELNFEAAAELRDKLVELKKISEDL >gi|224461045|gb|GG657759.1| GENE 680 704553 - 707396 3033 947 aa, chain + ## HITS:1 COG:CAC0503 KEGG:ns NR:ns ## COG: CAC0503 COG0178 # Protein_GI_number: 15893794 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Clostridium acetobutylicum # 8 945 2 939 939 1226 64.0 0 MQNKADEKQYIKIRGANEHNLKNLDLDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRY MESLSSYARQFLGQMEKPDVESIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYFRLLYA RVGTPHCPQCGKEIVKQTVDQMVDQIMDLPSGTKIQLLAPVVRGRKGRHEKLLERAKRSG YVRVRIDGNLYELSEDIALDKNIKHNIEIIVDRLVVKEGIEKRLTDSVEGVLALAEGLLV VDVIGGETMNFSQSFSCPDCGISIDEIEPRSFSFNNPFGACPECLGLGYKMEFDEDLMIP DKNLSIAEGAIAVMGWQSCTDKGSFTRSILDALADAYGFSLETPFKKYPKKIHDILIYGT GGKEVKVHYKGQRGEGIYDVAFEGLIKNVERRYRETGSESSKAEYETFMRITPCHECGGQ RLKPGALAVTIGGKNIAEVTALSIGRLQRFLDRLKLNKQQTLIGGQILKEIKARIQFLMD VGLEYLTLSRATGSLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLNTLK HLRDLGNSVIVVEHDEDTMREADHIVDIGPGAGEHGGAVVAQGTAEEIMKKEDSITGAYL SGRLAIPVPDERAEPSGWLKIKGARENNLKNIDVKIPLGVMTCVTGVSGSGKSSLINEIL YKRLARDLNRARTIPGRHKDIEGIGQLDKVIDIDQSPIGRTPRSNPATYTGVFDLIRDLF AATPDAKAKGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCGGKRYNRET LDVKYKGKSIYDVLNMTVEEALEFFENVPSIRRKMETLYDVGLSYIRLGQPSTQLSGGEA QRIKLAAELSKRSTGKTVYILDEPTTGLHFADVHKLTEILRRLASDGNTVIVIEHNLDVI KTADYIIDIGPEGGDKGGTVIAEGTPEEIAANPVSYTGKYIDVMLHK >gi|224461045|gb|GG657759.1| GENE 681 707712 - 708701 1106 329 aa, chain + ## HITS:1 COG:CAC2858 KEGG:ns NR:ns ## COG: CAC2858 COG1077 # Protein_GI_number: 15896112 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Clostridium acetobutylicum # 4 323 8 327 340 382 62.0 1e-106 MSVDIGIDLGTASILVYVKGKGVILKEPSVVAFDRDTNAIKAIGEEARLMLGRTPGNIVA IRPLRQGVISDYTVTEKMIKYFVQKAMGKRTFKKPRISICVPSGVTEVEKKAVEEATYAA GAREVNLIEEPVAAAIGAGIDISKPCGNMIVDIGGGTADIAVISLGGTVVNTSIKIAGDD FDEAIVRYMRKKHNLLIGERTAEDIKIKIGTTYPLIEEEAIEVRGRNLVTGLPKTVTVTS SETEEALRETTGQIVEAVIGVLERTPPELSADILDRGIVLTGGGAMLRGLEELIEEKTGI NTMTAEDPMKVVAIGTGQFVEFMSGRKDI >gi|224461045|gb|GG657759.1| GENE 682 708701 - 710911 2092 736 aa, chain + ## HITS:1 COG:CAC2854 KEGG:ns NR:ns ## COG: CAC2854 COG0507 # Protein_GI_number: 15896108 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Clostridium acetobutylicum # 1 735 1 732 739 548 42.0 1e-155 METIKGYVEHIVYRNEENGYTVFNLNNEDGELTCVGNFLFIEEGELLNLSGGYTTHKLYG TQFSVESSEACEPEDLVSIERYLGSGAVKGLGTALAGRIVKRFREDTFRIIEEEPERLAE IKGISERKAREIALQVEEKKDMRQAMIFLQKYGISTSLAAKIYQHYGQSVYRVIEENPYQ IADHVSGVGFKTADEIAAKVGIHTDSDYRVRSGIFYTLLQSISEGHIYLLQETLLYRAGQ LLGVEIRHIEKYLMDLAMEKKTVMKEAEDGVRVYAAHYYYMELNVAKMLHDLNITYDVSE STLRRRLKAIEENTGLELDEMQRSAVMEAAGHGITVLTGGPGTGKTTTINAMIRFFESEG MDIFLAAPTGRAAKRMTEATGYEAQTVHRLLEVNGNPEEEGRSGFLRNAENPLEADVVII DEMSMVDLPLMAALLDAICPGTRLVLVGDRNQLPSVGPGSILKDIIDAHCFSVVMLTKIF RQAGESDIVVNAHKINRGEEVVLDNKSRDFFFLKRQDANVIISVLITLIQKKLPKYVHAE PYDIQVLTPMRKGLLGVERLNRILQEYLNPPSESRKEKEYGGRLFRTGDKVMQIKNNYQL EWEVSTKYGMTIDKGLGIFNGDMGIIKDINTYEETISVEYDEHRVVKYPYSLLDELELAY AITIHKSQGSEYPAVVIPLLKGPRQLYHRNLLYTAVTRARQCVTLVGSDTVFQDMIQNTN EQNRNTSLAERIRELK >gi|224461045|gb|GG657759.1| GENE 683 711040 - 711615 319 191 aa, chain + ## HITS:1 COG:alr2926 KEGG:ns NR:ns ## COG: alr2926 COG1040 # Protein_GI_number: 17230418 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Nostoc sp. PCC 7120 # 8 174 25 207 229 106 36.0 3e-23 MQCGKPVRRTEDEYCRDCAHTYHHYDRGSSIWLHKPPVSTSIYRFKYQNQRNYGSYYAEK MAEQCGAFIRACDPYLIVPIPLHPRKRRSRGYNQAEILAACLGKLTDIRVDGRGLARIRS SSPQKLLGSSERRRNVRGAFAVTEHFRPVPSVLLIDDIYTTGNTVDAAAEILKKAGVENV CFLTISIGQGY >gi|224461045|gb|GG657759.1| GENE 684 711699 - 712067 533 122 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3553 NR:ns ## KEGG: Cphy_3553 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 121 10 130 143 67 31.0 2e-10 MTQLAFYEQTQGKQDFKISEYYRKDYAGMHTICSILWVTVGYVCALALIFLAGMESLMAK MSNGLIITLGLAVVIGYFVLVIAYAVITSHVYNLRHKKARQRVKKYNHNLTRLLKMYEKE NK >gi|224461045|gb|GG657759.1| GENE 685 712068 - 713228 1556 386 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2588 NR:ns ## KEGG: bpr_I2588 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 306 1 307 314 223 40.0 2e-56 MESLFVLRGRLQELYARNSKVIDKAIQFVLALVTFYLINHNIGFMKLAASPAATVALAVI CTFLPMIMIVIAAAALILIHTFSVSLATLAVTAIVFLVMFIFYFRLTPKMTLIVLLTPIA FAFKIPYVIPVAFGLVSAPVALVAVSCGTIVYYMLKYVKSTAAVLESSGAKGLMTQISAY AKQVFQSKEMWVIIAAFIICFFVVYTLRRQSMDHAWKIAVVAGAVVDVVIIAAGDIALGV HTSYGSLIAGSIAAAAAGLILEFFFFSVDYARSESLQYEDDEYYYYVKAIPKISVATPEK TVKRINERQETEIIDTEEVRRKARRSGGAAAKRPPVEREADRKAPAERKKKPAPKKGPSA KSRVIGNTEQILLTQSLKQDLDLDKK >gi|224461045|gb|GG657759.1| GENE 686 713269 - 714159 1086 296 aa, chain + ## HITS:1 COG:BS_ybbP KEGG:ns NR:ns ## COG: BS_ybbP COG1624 # Protein_GI_number: 16077243 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 24 287 11 270 273 203 42.0 3e-52 MEQQITQLMERYLSIVDVYFPEVHLTDVIEVIILTFLIYQIMIWIKNTKAWMLLKGIIVL AVFILVAAILKMHTILFVARNSVTVMATAAIVVFQPELRRALEKLGERKFLTSVVPFETN RERVRFSEETMDSMIDAAYSMGAVKTGALIVVEQAIRLTEYESTGIRLDCMVSRQVLINI FEHNTPLHDGAIIIRGDRIVSATCYLPLSDNMGLSKDLGTRHRAAVGMSEVSDALVIAVS EETGAVSVASGGQLYRNISREELREKLTSIQNKKTDTNKLIAMWKGRHHHEEKTDE >gi|224461045|gb|GG657759.1| GENE 687 714137 - 715399 1404 420 aa, chain + ## HITS:1 COG:CAC3078 KEGG:ns NR:ns ## COG: CAC3078 COG4856 # Protein_GI_number: 15896329 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 402 1 385 403 73 23.0 1e-12 MKRRLMNNIGLKILAFFAALLLWLIVVNIDDPVVDKTFSNIPVTVTNEEVLTADPKNPQT FQIVDGTQTVNVTVVGKRKLLNEIKAEDILATADMKELTLKTQIPIDVTVNGYEGRYSSA YATPRNLQVKLEKEQGKKFPITPTTTGTVRDGYVLGEIASDPESVFIRGPESVISKISRV TAEVDVSGMSSDSVLKSQLTLYDEDNNEIDQSLLTNNLGSKGVGVSIQLLHTKKVSLEFD TSGISAAPGYAFSEITYEPQEIHVSGKSDALDSITSIQVPRSALEISGVSEKTEKIVDIT PYLPDNISLADENAGTVVVSISVEKNGTKSFELPLGSIAVNNLAENLKLTYGMAENIEIQ VRGPREILDKLEAGVDITANIDLKSCKEAGTYEVPVNVQYPASCSLEQSIKVKVVLESKE >gi|224461045|gb|GG657759.1| GENE 688 715409 - 715672 357 87 aa, chain + ## HITS:1 COG:MYPU_6030 KEGG:ns NR:ns ## COG: MYPU_6030 COG1925 # Protein_GI_number: 15829074 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Mycoplasma pulmonis # 5 81 5 81 87 70 45.0 9e-13 MVSQKVKITNPTGLHLRPAGIFCNEALKYECKVTFLIRNTTANAKSILSILGACVKEGDE IELVCEGEGEEEALKAMTAIVEHGLED >gi|224461045|gb|GG657759.1| GENE 689 715941 - 716315 276 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568558|ref|ZP_03777583.1| ## NR: gi|225568558|ref|ZP_03777583.1| hypothetical protein CLOHYLEM_04635 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04635 [Clostridium hylemonae DSM 15053] # 1 124 1 124 124 223 100.0 5e-57 MITEDKEYIYIQDSEHIWRKVMLSDIYYIETIKSTHYCEIVYKNGVGKIRADITPLQEEF APYLFRTKASTLVNLDLVQKVDTKNRILYFNDTIYCTYAQRLSPEVKKRLRLYNYRSYRG REDE >gi|224461045|gb|GG657759.1| GENE 690 716308 - 718077 1446 589 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42060 NR:ns ## KEGG: BBR47_42060 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 4 493 5 529 545 130 26.0 3e-28 MSERPYPFEKNRYYYGKMLTSADFQAEQRYNEYKRMFLNQMVLGRGVLCGLGVRMLDERT LLIESGAAVDGAGREITVPGDTVKKLSAFEGYDSLAKQKAALYVRYREETAQPVCVVNRK AEQDEYEDNRIREKYEFFLADCQERQQSGPDEDFFVEALLSGGPDYAVSLRMPAVVSRGR RVRLSLLVEKLSDEESSLSLSGVLKLPAFLTAEGAQELHICEEDIVLECGAFRTYDHWLY ASEVEFDSTTILWDVDASAITVDGSEAECEPDPELPLRLTDRTPEELIKWRVGQKSLEEK NHGNEEEAVRLAEISIADEAHDHVLREVREFGVKRYIPVPESEEICREYLSYYSEHAEYI RDMLPAAEKKEEEIPAREAEAPVIRGGTLEIPLDVKMKKGKICYSEEIIHGLGPGNVYVD VGICNVDDGAGSRNKSDTVVYGDTGLFEGKNRQGISAQTAVKVFEARGSFQVAARLTGEQ NTIVLPLRWTAVRVPDGTDTDGEDGNMQIVPETPTVRLSQGEKHYFSVRFKNMLPCTLKY ELMEDGGGEIGPDGIYTAPAKAGIYEIRISCADHRSVCTYVYAVVGGKE >gi|224461045|gb|GG657759.1| GENE 691 718074 - 718877 641 267 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568560|ref|ZP_03777585.1| ## NR: gi|225568560|ref|ZP_03777585.1| hypothetical protein CLOHYLEM_04637 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04637 [Clostridium hylemonae DSM 15053] # 1 267 1 267 267 474 100.0 1e-132 MSLRKIAAVREGRVNAVSVCTDSADDEWHTLWEVKKHSCARKLMEMQGAAPFGEFRMDGE RLSVILAYEEPRPLERFYQGSIYTWEERRRVYDNLTAACADAGMPYPLLYLLLKDRCINI RRDDTIYFTYYILLDELKPDRTEQDCVRLAAGILAELMELYGKKEERSCLALIRKKQKRN AYHSFAELAHDLKFIDGRKRLSLIWGRIPYPEQSTKDKLFRILLTVTVLLAAAAVLLLLS QLIFGDIPLFRAFTSAVRRIGTESLLK >gi|224461045|gb|GG657759.1| GENE 692 718947 - 719909 931 320 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42250 NR:ns ## KEGG: BBR47_42250 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 54 145 214 305 557 64 39.0 7e-09 MWLVSKRFALLVTVIVCVASLWCVFRSFPAASAGKEQGIPVFRYNSLPLKFYRGKAEVLA RSGYTAYIGQVSKGAAQGKGTLYTKEGNVRYKGGFSGNEYHGKGTLYRESGTKEYAGAFQ YGVKQGKGKLYNTGEELVYTGSFRNNAIVYEQLAGIPTEEAARKYTGKQILYELDGRICA AMPEIHAVYSARSGETYADSLWMTTGVYVLAEQFVTDEGNLKTVKELKTYFGSSEYEGTT PLQFEDVAAMRQLSSSSAKKYQTEVFVETEGELSDARTVTGYSRDADGYIYTFEKEGFCY TFFTYGKNGGFGMYLIEKEE >gi|224461045|gb|GG657759.1| GENE 693 719928 - 721967 2072 679 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568563|ref|ZP_03777588.1| ## NR: gi|225568563|ref|ZP_03777588.1| hypothetical protein CLOHYLEM_04640 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04640 [Clostridium hylemonae DSM 15053] # 35 679 1 645 645 1161 99.0 0 MEKRRKRFLCILCSVCISAGVFVQTPRTAEAGQRVLTLAQAKKLAYLNSADYTKVKSKIN LQKIKYTEAVKSIALKQKNMLTFRWSPLLKFKFPERPDMAELYDWLYKPIQLQTALSELM HELQDVKYAVDEKVSNLYVAAYAAQEKITFTEARLDSADGTLKRNEWKVKTGEGAQADVD KGKTQMKKLTTDVSLLMRQHETAKKKLGNAVGLDLSWGYRFENPYVKGKIGRSMLKELTE YTLSRDQGCYEAGLNARAGLISMELNERMLKVKYKKYMPYIQSYINQARQGQKIDKDAFK ASYDQFLHALDSRWQGNFKILFIKISKEWLKGALDGVRYIEDDPYVMYTQVLEYADFKLE QDNKKKEVEEAVSDRFEALITSRNALDALRETVTDMEGKLQKQLALNRQGKLSFEELNAQ QEEYEEYEIEMLDTLADYSSQLYSFDRLTCGGITKYLEEGSLSADTVAGGESYLVQEDGE GAYYTLESRMEDNIFLLHVRIPEDFKVKVTDYELWVDGTQVGDRTKAGDPLKHLALTLDD VQSAAVRFYNKDAFVDECKIDPMVSQGTLDIKGEYKAAEKKAEKKAADYSYTFRSSTGMA ELKIEPAAGEGIAYYQVTDRDGQAVFEKKLVPAGEPFRYLEVAAKDQKNLRITFYDADKK KLYTGEFQPDTLQITVQEE >gi|224461045|gb|GG657759.1| GENE 694 721971 - 724271 2442 766 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568564|ref|ZP_03777589.1| ## NR: gi|225568564|ref|ZP_03777589.1| hypothetical protein CLOHYLEM_04641 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04641 [Clostridium hylemonae DSM 15053] # 1 766 1 766 766 1233 100.0 0 MGRRKKKAAAAVTALLITAGFVVWFLAGRSEAVFREEDAVHIDPDKIEQSTLIVGTHLIY LGSITDKLYETAAASAEESGQTDIYYRSELGDGRWYAVNDAGSLEDISEKGKEIPKSRIK SLFLTHHTKSDGYTYRLKDNKRVSVYEINSPYDLEGMKELSALSRQKELNGKGAEVFQAK VKNKVTKWCDKSLDKLQKETVRLRTAGADAEWLDMLDKAMGKVDDLRRHEVYKKVDQKVQ KLLDDEDGADAGYNEALSGTLTELSDRLAETDGNMLNTDPEAIEEEEESGDEPEEEEPDN EPEEEEEFEITVMAEMESELIWQYIQDPDDRILTDMVTLQHIMDGVSTVPGEEAEFLKNK LIPAAEAAYARNPTEAAENELEYYRSEWNLRENGTEESGQELRQMYDEKAELEEKRLAAL DEEDLTEAKRIEALIDVKSKEILDREDAISRETASLIKQKTGLEAELSGTGTEEEKEKIQ NEIDKLDSRIAALGAGVDEGTSTARIQKMAEEAAEAMEEGADGAARAAEAVDGIEALCGS NPELAGSSLRNLYEKMAAKKYLDDTKIYDSILDSIETALAENMTVLDGEIDEKEAVQIME ETAGKDKMAALMGLSMFVEQTADAGLENLLEGKAKAWAGEEDAYVFARLSGTAGIRYAPA DVTARYASVRYVFNDNKKRATLASRKTYYQFTAFQSSVIRGPEEQKEKLSFAAGFKGTVY IPEDYVKQEFGCEVYDIPGTGYCILIDQDITDKAAEVCDALLEKGE >gi|224461045|gb|GG657759.1| GENE 695 724276 - 725961 1851 561 aa, chain + ## HITS:1 COG:mlr6548 KEGG:ns NR:ns ## COG: mlr6548 COG3497 # Protein_GI_number: 13475469 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Mesorhizobium loti # 1 559 1 526 528 346 39.0 8e-95 MADYLSPGVYVEEYDNSPRGVEGVGTSTAGFVGMAEKGATSGPPVLVTGFADFTRKYGGY LSEFTHGEYRYLAGAVEQFFANGGTRLFIARVVPEDAKAAEGTAGNVTLRAKNEGAWGNK ITVSVKAYAKRRMQLLEKLTDKKYRAKSVSGFEEGSIVKAGEAYNRITAIQGLEVTFEEA FKEDMADDSLVPEKVLYLAEFQADIRCGDEAEVFEELNMNPLSRNYAPSRLSASSIVEVS AALPEGIKNPAELFAGAEEAVITLEGGSDGTLEEVNDGTFIGKNEQAGKRTGIQAFLENS FVSIMAVPGITSPEVVVSLVNHCENTKSRFAVIDMPKDMTDPAELLAYREMLDSTYAAMY HPWIQVFDRSCQKPSYFPPSGAVAGVYARTDTARGVHKAPANETIACTGLSVNYAKGEQD ILNPAGVNLIRALPGQGIRIWGARTASSNASFKYVNIRRLFIYVEESIKANTNWVVFEPN DEALWNRVRTSISSFLETLWRNGMLAGASAGESFFVDIGPSTMSQDDIQNGRLICNIGIA PVRPAEFVIFRVTQNTAESGA >gi|224461045|gb|GG657759.1| GENE 696 725988 - 726530 653 180 aa, chain + ## HITS:1 COG:no KEGG:Fjoh_3151 NR:ns ## KEGG: Fjoh_3151 # Name: not_defined # Def: phage tail protein # Organism: F.johnsoniae # Pathway: not_defined # 10 158 2 137 142 102 43.0 1e-20 MPGEENGGYSYPLTNMNFLVTFGENLTAAFTEVSGVEATVEEIEFRQGNSTSLAPVKIPG LIKHGSVTMKMGYTTDNQLINWIYNCIKEQRTGFARKDVTIELIDIRTESPAQPVQTDAA RPAWKLKNAWVTKYSAPDLNASGKEVAIESIELAYEELVTPGGAAAGGGESAGGGGESAT >gi|224461045|gb|GG657759.1| GENE 697 726574 - 726936 480 120 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42170 NR:ns ## KEGG: BBR47_42170 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 2 117 4 119 125 123 49.0 2e-27 MQTVYEFTLPKGYMDAQGGIHRKGKMRLATAGDEIRATRDPRVVSNPSYLTLVVLSYVIT ELEGVEIMTAGVIEQLFTADLAFLQDMYERINDVEPPRTVVTCPACGHVHEVPVNFTREG >gi|224461045|gb|GG657759.1| GENE 698 726969 - 727127 139 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568568|ref|ZP_03777593.1| ## NR: gi|225568568|ref|ZP_03777593.1| hypothetical protein CLOHYLEM_04645 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04645 [Clostridium hylemonae DSM 15053] # 1 52 1 52 52 89 100.0 1e-16 MSFIAYYYHWSQEEVMALEHRERRRWCDEISVINRGQSPSAGREKSILEWKL >gi|224461045|gb|GG657759.1| GENE 699 727127 - 727549 463 140 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568569|ref|ZP_03777594.1| ## NR: gi|225568569|ref|ZP_03777594.1| hypothetical protein CLOHYLEM_04646 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04646 [Clostridium hylemonae DSM 15053] # 1 140 1 140 140 282 100.0 5e-75 MSDMVMNMNFLLTLGEKVIPCRSIHGFHRECEQEYIQEGGLNGYVHMRPKPASAPSTLEI ERYVTGDFEDALPNGECLDKDLILQVGIGREGEKSPSMKLTFKGCKVTQKSYGEINAEKG GIFVETTTVSYQELKVGDRM >gi|224461045|gb|GG657759.1| GENE 700 727546 - 728049 479 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568570|ref|ZP_03777595.1| ## NR: gi|225568570|ref|ZP_03777595.1| hypothetical protein CLOHYLEM_04647 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04647 [Clostridium hylemonae DSM 15053] # 1 167 1 167 167 225 100.0 7e-58 MRTTEAFNRKITVLYDRDIRRIRPKKLSHLSGTSQVVQVKEGDVRYSHQMNLRVDERPHI TLKLLAGLTYQEELEQRSYVRRMKKAELVYKNLEQTADAAGLVRELEAKNRTQVKINEMK KELVRESKEEVHYIVRKQMQEQTGALTEKVYRRLEQKLQDEKRRRGL >gi|224461045|gb|GG657759.1| GENE 701 728064 - 728528 459 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568571|ref|ZP_03777596.1| ## NR: gi|225568571|ref|ZP_03777596.1| hypothetical protein CLOHYLEM_04648 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04648 [Clostridium hylemonae DSM 15053] # 1 154 1 154 154 291 100.0 9e-78 MVEKAWIEFKDIVTDSGDGTVFYVPFNPTELNFEAGAEKDEEKKTGARGMNVRLRMKLIF DKSLEMESVQEDTQRFLSAARDPLKRRVLFQWNKIFFDGLLERMSAVYEMFTEDGHPVRA RVDLTIAGRSGSMAEEEWYKDYRELFFSKRFDKC >gi|224461045|gb|GG657759.1| GENE 702 728522 - 728971 395 149 aa, chain + ## HITS:1 COG:no KEGG:CAP2UW1_3670 NR:ns ## KEGG: CAP2UW1_3670 # Name: not_defined # Def: hypothetical protein # Organism: A.phosphatis # Pathway: not_defined # 18 137 25 152 410 67 31.0 2e-10 MLKKAVLTVPGEKGDFHSLEVQYNPSTLNLSVSARSAAYENPQTHKMHDQVDQNTDSGEL TLSFDLVIDDDGGRDVRKTLQGFLGMMFQESSRKIAFGWGDMNFEGSLEHINASFDMFDS SGTPVRGKVHMEIAQRDFKGVVNDELRQP >gi|224461045|gb|GG657759.1| GENE 703 728952 - 730082 1253 376 aa, chain + ## HITS:1 COG:mlr6558 KEGG:ns NR:ns ## COG: mlr6558 COG3500 # Protein_GI_number: 13475476 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Mesorhizobium loti # 1 374 1 370 370 80 23.0 7e-15 MNYDSLKNVYGNFQLPKAEVLVEGKSFGENRAGMLIDEVRVELSCGFEAAEAVFCITGCV DLDTGMYKTKELKPFILLGSYVLIKMGYRSGTKEVFRGFISRTEFVNEDGTPSVEVTSVD VKGIMMANTYARQLKARYVSDAVRELFDKPSYQELSARGIIGKLDIPPTPDKTRGEADKN LVSIEMVSESDYEFAVRWARRSGCEFYTSLGTVRFRKARSDEKTYFTLGPGDGMTQYRIS YDVSPLAGKAEIRGMEDGRGEVIKAKKKISRRISLGNYAGKLVDQSEKIYIDSTLRSKEE AAERLEYLAERTAYRFGTFECECVGVPELLPGRYIEVEGLGSPADNRFYVEEVLHSMDSL SGYRCRIKGRTDKLKD >gi|224461045|gb|GG657759.1| GENE 704 730097 - 730849 793 250 aa, chain + ## HITS:1 COG:mlr6559 KEGG:ns NR:ns ## COG: mlr6559 COG3501 # Protein_GI_number: 13475477 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 7 249 3 212 213 68 23.0 1e-11 MSFYDEMEAISMGQMSRMENGGERIYGVVLGIVVENYKKELPGMVQVQIPVRDEENSIYR WAKTAHMYSGREWGQYIQPEIGDQVLLVFEHGNIERPFIIGSVPRNNDKFISQSSKEQNE TKRIVSRHGNEISIADVKDSDGEKDSIRIQTSGGGQSISLENEKSQIVIKAEEKLIFKVG DSITVTLNGKSGKVTIDAKQVNISASDSMKYETDGAATLSGQNTVIKASTGLKLESNGMA SVKGSAVNIG >gi|224461045|gb|GG657759.1| GENE 705 730899 - 731288 480 129 aa, chain + ## HITS:1 COG:mlr6561 KEGG:ns NR:ns ## COG: mlr6561 COG3628 # Protein_GI_number: 13475479 # Func_class: R General function prediction only # Function: Phage baseplate assembly protein W # Organism: Mesorhizobium loti # 2 125 3 127 136 60 33.0 5e-10 MEEKIQLGRGMKFPPQIDLTTGRFVTADEEQSVKDSVYLILMTQKGERPVRPEFGSRILS YPFTDTNPTTLHVLERQVKETLLTQEPRIADVEVQTEFRSEEACLYIHIRYTLVQTGAEN SLTIPMETA >gi|224461045|gb|GG657759.1| GENE 706 731305 - 734091 1881 928 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42090 NR:ns ## KEGG: BBR47_42090 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 13 927 7 1001 1014 193 22.0 4e-47 MLDGRRKNEICAQIKTLASSYTPEWNFSLEKPDTGSVLAGIFAEQLETAIQEYNALPARY EEELVRMLGVTPKRPEPARAVIVLEPSAGMQEGIQVPKGSRFYAERAERDTPVIFESSHD LYVTDARITAAFAISADEKTVVPLCTEEGVVTYPMSLFCFKPHIPYTNELHIRHPWLFRG ELSEFSVCFGSKAAAGRLMDEDEFAFSFLTSGGRVPVKKKRQNGASIDICQGADSDTLVI ERKTVREDEIFLPSVYFTAGRQSAALDYIYDGEQEITGDAAAVFGEELSLYKECYIGFDS GLIQEGTDISLEFGLEFKVREVRENASKEEELKLVKRRPDPRLEERTADVYIQEVSFSYY NGHGFRRLPVSRRCSDLFSGADNTGRRAIEFSCPDDWTEMEQEGCRGYMIRFQIMKADYC YHRPGRHHYPYLTNMRAVYSQREKELWPAQAVRVQGKKETDVTGYIQRRKPLPAFLKFPY RGESMLFGFDRKPAGGPISLYFIIRKNINFSGIQAVFEYSSPKGFQPLKVLNNTEDLKNS GTVLFVPPSNMAEMDIEGKTRYWIRLTSRRPADVRTVLPIAEHIYMNGTEVLNIERSQPK EQYVEQIAPDMAFPAPASQLLDVRIESRERGRLVRWSETDSFDSPASGDRYYVVDRSGQR VVFGDGRSGRIPRNTEGPAFTMEIQSCDGAEGNVPENAIDNAAFPLPNVERIFNPLKASG GSNLEEPDSVKRRGRVLMGTGGRLVSEQDYVNAAKAYSNLVANAWCKVEGRRITLAVLMQ DYESGPHSFRQIKDSLAGCLLTMAPASVRKKDLIIKEPVFVNVSVELWIRVEEWKRALEE RGRILEGLYRLFRPVRRNGRTEPGTGYMPRESQILMAVRSFSPDARIEHSNITVSYADEK GRHRTELGQLKQTPFMVCVNGTHEVHVC >gi|224461045|gb|GG657759.1| GENE 707 734085 - 734249 112 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568577|ref|ZP_03777602.1| ## NR: gi|225568577|ref|ZP_03777602.1| hypothetical protein CLOHYLEM_04654 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04654 [Clostridium hylemonae DSM 15053] # 12 52 12 52 52 76 100.0 6e-13 MLEELEQVVEEAMAWAGICSQEWTNMNPSDPGVTILENLSALHLVQKEAQDRSS >gi|224461045|gb|GG657759.1| GENE 708 734334 - 734552 261 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568578|ref|ZP_03777603.1| ## NR: gi|225568578|ref|ZP_03777603.1| hypothetical protein CLOHYLEM_04655 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04655 [Clostridium hylemonae DSM 15053] # 1 70 31 100 100 121 100.0 2e-26 MAEQQNGCAPSDCAGCAHADSCSSKPQDLSAPANPFSHVKKVIAVVSGKGGVGKSMVTAS LARMMREQGFSS >gi|224461045|gb|GG657759.1| GENE 709 734696 - 735070 581 124 aa, chain - ## HITS:1 COG:L52644 KEGG:ns NR:ns ## COG: L52644 COG0251 # Protein_GI_number: 15673211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Lactococcus lactis # 1 124 1 125 126 134 54.0 3e-32 MKVVATEKAPKALGPYSQGYVHNGMFYSAGQIGINPEVDNVEAATIEGQTEQVCKNVGEV LKAAGTDFDHVIKTTCFLADMGDFAAFNEVYAKYFTSKPARSCVAVKTLPKNVLCEVEVI AVVE >gi|224461045|gb|GG657759.1| GENE 710 735074 - 736024 1059 316 aa, chain - ## HITS:1 COG:AF1665 KEGG:ns NR:ns ## COG: AF1665 COG2423 # Protein_GI_number: 11499255 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Archaeoglobus fulgidus # 2 313 4 308 322 131 29.0 1e-30 MIILSKEEIEKLADPDKMMDQIEEAYRIFGSGEYYMPPRPSVEHDNKTLMYMPCYTKEII GTKMLTIFPDNARLGLPSIDGIILLNNAVTGAPEAVLDGQSVTAWRTGAVGGVGIRHLSR KDCHTAGIIGAGVQGFHQAVYACAARDIHTVYVFNHSDRDLTEYMDRLEKAIDNPGTKVV QCKTVEELAAKSEIICTTTPSAEPVLPNDRELLRGKCIIAIGSYTPKMREIPDAVWDLVD KVYIELPYACEECGDLSQPIEEGRLTKDRIVLMSDYLASEAEEAADTEKTTYFKSVGMGL FDVCIAQKILEEAKER >gi|224461045|gb|GG657759.1| GENE 711 736029 - 737345 1722 438 aa, chain - ## HITS:1 COG:FN1789 KEGG:ns NR:ns ## COG: FN1789 COG0534 # Protein_GI_number: 19705094 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 431 27 457 459 358 46.0 1e-98 VAIQNLINVGVTAADVIMLGKVGEKVLSGASLAGQIQFIMTLLFMGITSGATVLTAQYWG KKDTRTIEKVLGMGLSAGIVTAVLFAAAALFIPEQLMHIYSSDPEVIAEGVKYLRIVGSS YLFMAVTQVYLNIMRSIERVLIATFVYSISLLVNIAVNALLIFGLMGFPAMGIRGAAVGT LIARITEMFIVLLYAFVHNKLVRIRFRDLIRIDKVLFRDYMTYAMPVVLNEVMWGLGSSA NTAIIGHLGSAAVAANSVAQVARQLATVVVFGIAHAAAIYLGKTIGERKLEYAKAYAKRF IWLSVIIGAAGGAVILIAAPLANASLALTGQAKGYLTFMFFVMSYFTVAQSLNGTMVIGI FRSGGDTKFGLIMDVSTMWGCSIIIGAVAAFVFHASVPVVYVILMSDELIKIPLTLKRYV SYKWLKDVTREKEELRGA >gi|224461045|gb|GG657759.1| GENE 712 737507 - 738691 1370 394 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 391 1 388 389 289 39.0 7e-78 MHSFVQYTPTEIVFGKDAERETGRLVKKYGAARVLIVYGGGSVVKSGLLDTIKKELDAEG IQYDELGGVQPNPRVSLAREGVRKAAGLGADLILAVGGGSVIDTAKADAIGAANPETDIW EFWEGRQTVERSMPVGAVLTISAAGSEMSDSSVLTNEETGRKCGVSSDLNRPKFAVMNPE LTYTLPKYQLACGIVDIYMHTLERYFTPVPGNRMTDEIAEGLLRTVIEYGRKAYADQTDY DAMSEIMWCGSLSHNGITGLGRPRDFANHKLGHELSAMFDETHGATLSAVWGSWARYVYR LDVPRFAHYGYAVWGIENKDEKEAALAAIEKTEEFFRSLHVATCIGELKTGVLPDETLRK LSQNATKGDTIRLGSFKELTAHDAYEIYKEANHG >gi|224461045|gb|GG657759.1| GENE 713 738835 - 739989 1226 384 aa, chain - ## HITS:1 COG:no KEGG:ELI_2253 NR:ns ## KEGG: ELI_2253 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: ABC transporters [PATH:elm02010] # 1 382 1 385 389 191 30.0 4e-47 MTVFRGFMIMVKRNLGMMFMYLVIFITIAVMVQTMTKGKGMEHFEEERLKVAVIDRDHGE LARGLTEYLGERHDLVKVKDDKNVIQEKLFYRDIYYVVTIPEHFERVCLEEGEKLQTTKL PDTTSAFYVDQQISTFLNSVKVLTSAGYSIDEAVSDAAEAGKTESDVKLIDKNGNGGFAM PHSFLFQYMPYIILAVLCYTIGYIMMAFRKKDVRQRMLCSSISGRRQNMQMVAGFVVIGA GFWGICMLLPLVMYPGQFLNDPNNIYYMINSFLCVLVGLSIAFTIGVVVQEIAALNGIIN VITLGMCFTCGVFVSLDVLGKGVRMFAQFLPLYWYEKVIGVLSVNTEFTKAQSEVIYKGF GIQLLFAAAILCVGLVLSKSKEQE >gi|224461045|gb|GG657759.1| GENE 714 739976 - 741103 1289 375 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1224 NR:ns ## KEGG: Cphy_1224 # Name: not_defined # Def: ABC-2 type transporter # Organism: C.phytofermentans # Pathway: ABC transporters [PATH:cpy02010] # 2 375 3 380 380 238 34.0 5e-61 MLHLIKYRFLQTVRERSVMFWALAFPIILGIFFFVSFGNSMTGEEMETIRVAVVERDVES DQGSAFRAFLDEMDGETLKIVKTDEKKALKDLKSDEITGIYYIDTEPSLTVAKSDINTSI LKSLLDSYNKNANMLMKIAREHPDRLMQAVEALDGWQTMTEEISLGGKTMDPNVSYFFAL IAYACLSGAFLGVQASLDGQANLSALGARRSVTPTHKLWLVLTDMSVLFFIQFINIVILT LVVRFGFGIELGGNIAQILLVDLLGSMIGVSMGIMLGCVSRMSEGIKMGLTVMMTLLPGF LAGLMFGNMKNIIEQNCPIINRINPAAVLSDTFYCMGVFNDTERFTRNLLILALMSVLFI GIAFMSVRRERYDSI >gi|224461045|gb|GG657759.1| GENE 715 741115 - 742044 1111 309 aa, chain - ## HITS:1 COG:CAC0236 KEGG:ns NR:ns ## COG: CAC0236 COG1131 # Protein_GI_number: 15893528 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 1 307 2 308 310 287 47.0 1e-77 MITIQNLVKRYGSLLALDHLNLEIHEGEIFGLLGPNGSGKTTAINCLLALLKYDKGTITV MGKEMRPDSYSVKKEIGVVMQNVAVFEQMSVRENIDYFCGLYVRDKGKRRELVDEAIRFV GLEDYTKMRPKKLSGGLLRRLNIACGIVHKPKLIIMDEPTVAVDPQSRNKILEGIMELNR QGSTIIYTSHYMEEVEQICSRIAIIDHGRVLATGTKEELKSMIKTGETITIQAAALEEKH LAQIKELPHVFDVSYDEQTLKIRLSGAKHNLVRVLHYMEEQDISFGRVFSELPTLNDVFL EITGTELRD >gi|224461045|gb|GG657759.1| GENE 716 742160 - 743221 957 353 aa, chain + ## HITS:1 COG:CAC0239 KEGG:ns NR:ns ## COG: CAC0239 COG4585 # Protein_GI_number: 15893531 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 31 349 35 354 368 115 28.0 1e-25 MKRILDQLVLLIFSFTTILLMHIDTAFIISFLTAVIYISANYFVDSRKFHFLSSAFYILL AVFFPVLLYFLPAVLYTCLWYDNYIGLAAVCVTALCRILPLSWPLFLLLAFGCGISLLLC FQTDRYEQLEQRFKQTRDDSTERNLLLKEKNHALLENQDYEVYTATLKERNRIAREIHDN VGHMLTRSILMTGAIRTVNKEPALESSLIQLEETLNTAMTNVRESVHDLHDESINLKEAL TGLTDTFTFCPIHLDYDMGYDVPRGIKYSFITIVKEALNNIIRHSNATDVHIIVREHPGL YQLVIEDNGTVKSRGSGLGLTNMKDRVETLRGTMQLQTEKGFRIFITIPKRED >gi|224461045|gb|GG657759.1| GENE 717 743228 - 743848 842 206 aa, chain + ## HITS:1 COG:CAC0240 KEGG:ns NR:ns ## COG: CAC0240 COG2197 # Protein_GI_number: 15893532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 205 1 207 208 163 42.0 2e-40 MNILVVDDDILVSNALKTILESDDTLHVAGTGEDGEDAVRLYGELKPDVLLMDIRMKKLN GLDASRMILSDYPDARILLLTTFSDDEYIVKALKCGVKGYLLKQDYNSIIPAVKAVHTGQ TVFGTEIISKIPDLLQKKSGFDYASCDIGEKEYTLITLVADGFSNKEIAEKMFLSEGTVR NYLSNILDKLDLRDRTQLAVFYYQHL >gi|224461045|gb|GG657759.1| GENE 718 743882 - 745996 1910 704 aa, chain + ## HITS:1 COG:slr1857 KEGG:ns NR:ns ## COG: slr1857 COG1523 # Protein_GI_number: 16330244 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Synechocystis # 22 704 6 707 707 708 49.0 0 MTDLDYDTLELDTPLAPAYHHLKPLDTVNGFKIRPGFYDHNGAWAMPNGVIFTVHSQGAV SCEILLYHRTETQPYAVIPVPDCYRIGHVFSIFIFGLDVEKFEYAFRLDGPYDPEKGLLF SKDNILIDPYAKAVTGQSTWGKKASSDGYRARVVRNNFYWGAESPSQIPFDELIIYEMHV RGFTKMAQDVTAPGTFKGIIEKIPYLKTLGVNAIELMPIFEFDELMDRRTVDGKELLNYW GYSTVSFFAPNTSYTSAVEYNREGLELKQLVKALHDNGMEIILDVVFNHTAEGDEKGPVF SFKGFDNNIYYMLTPEGYYYNFSGCGNTMNCNHPIVQRMIVDCLRYWVETYRIDGFRFDL ASILGRNEDGSPMEHPPLIKALAFDPILGNTKLIAEAWDAGGLYQVGDFSDLKRWSEWNG RYRDDLREFLKGGLWCAGAAAQRMIGSPDLYDPEIRGKNASVNFITCHDGFTLYDLYAYN TKHNEANGWDNTDGSNDNRSWNCGAEGETSDPAVNALRRRMIQNACLVLMCSRGIPMFLA GDEFCNTQYGNNNPYCQDNEISWLNWEMLEKNQDIFRFFRFMIHFRRRHASIRGTCRPNR YGLPEVSLHGETPWDASYGADTRVIGIMYAGYDEARKTDDIIYIAVNAYWESVTITLPEL PDHLRWHTAANTGDTDRTCFETPAPLDSGHFLMGERSSIVLVAQ >gi|224461045|gb|GG657759.1| GENE 719 746056 - 747417 1079 453 aa, chain - ## HITS:1 COG:lin0003 KEGG:ns NR:ns ## COG: lin0003 COG0534 # Protein_GI_number: 16799082 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 4 451 2 446 447 191 30.0 2e-48 MKEVQDLTTGSVPKKMILFALPLLFANLLQSVYSIADMVVVGNIVGETGLAAISNASMVS FIINSVCIGITMGGTVLTAQYKGANDEQGQIETAGTLFGISLIASFIITVIGLFVYAPLF QVLNVPAASMQDACEYMKIVCCGTVFVFGYNAVCSVMKGLGDSKSPLYFVATAAVVNIVL DFILVGPFGMGTAGAACATVFSQGGSLFVSIVYLKKKTAVFDFELNRFVVRWGTLRAILK VGLPAAVQMAVVNVSYLLITGMLNNFGVSVAAASGVGLKVNTFAGMPCWAVGQAVTAMAG QNMGADDMERVRKTTKTGLYLNVCITLMAVIFVQLSAEQIIMLFEPESSEVIKGGVLYLR ICCGINSLIYAVMYTFDSFAIGIGSAGTAMVNALLDAAVVRLPVCWLLAFAVDIGFSGIY IGQAVSPILPAAVGLLYFKSNVWAKKKLIRQCS >gi|224461045|gb|GG657759.1| GENE 720 747610 - 747702 77 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFGKFCIDYSSAQFDTSKHCTEPDEYENV >gi|224461045|gb|GG657759.1| GENE 721 747767 - 748762 409 331 aa, chain - ## HITS:1 COG:no KEGG:Kkor_1163 NR:ns ## KEGG: Kkor_1163 # Name: not_defined # Def: collagen triple helix repeat-containing protein # Organism: K.koreensis # Pathway: not_defined # 31 193 360 522 647 123 52.0 1e-26 MEENTNFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGANGNWYIGDTDTQVPATGP KGDKGDRGETGPVGPQGATGATGPQGLTGPQGLTGPQGPTGATGPQGATGPKGDTGSAGA QGPTGATGPKGDPGTAGPQGIKGDPGVAGPQGPKGDKGDTGPAGAPGPQGIQGPKGDKGD QGPAGPVNIANNIETTEEGYALDARQGKVLSDMVNSRLYIADITSLESWHKIIKYSDGTV ILYGAKQFTGIVCTTLSVGKYVTSSLYFSKVPAGITINNLVTSLGNGSIDGRIYFKRTTI SGGEVRCSFYSDTSASGLSMNAAIVAYGTWS >gi|224461045|gb|GG657759.1| GENE 722 748894 - 749970 1095 358 aa, chain - ## HITS:1 COG:STM0013 KEGG:ns NR:ns ## COG: STM0013 COG0484 # Protein_GI_number: 16763403 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Salmonella typhimurium LT2 # 2 358 37 376 379 263 46.0 3e-70 MNPGDAEAEKKFKEASEAYAVLSDPEKRRQYDQFGHAAFEGGAGGAGGFGGFDFGGADFS DIFGDIFGDLFGGSGRRGRGSQGPMKGMNIRKSVRITFEEAVFGCEKEIEVVLKDPCPKC GGTGAKQGTSPETCSKCGGKGQVVYTQQSFFGTVQNVQTCPDCHGTGKIIREKCPDCTGT GFVASKKKIAVSIPAGIDNGQSVRIREKGEPGANGGPRGDLLVEVVVSRHPIFQRQDMHI FSTVPISFAQAALGADVKIKTVDGDVLYSVKPGTKTDTKVRLKGKGVPSLRNAQVRGDHY VTLIIQTPEHLSSEAKEALRKFDELTGNTLNQNKDEGTKGTKGKKKGFMDKMKEAFDD >gi|224461045|gb|GG657759.1| GENE 723 750063 - 750179 141 38 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167758848|ref|ZP_02430975.1| ## NR: gi|167758848|ref|ZP_02430975.1| hypothetical protein CLOSCI_01191 [Clostridium scindens ATCC 35704] hypothetical protein CLOSCI_01191 [Clostridium scindens ATCC 35704] # 1 35 1 35 396 70 97.0 5e-11 MAESKRDYYEVLGVSKDADDATLKKAYRQVAKKYHLAS >gi|224461045|gb|GG657759.1| GENE 724 750300 - 752180 2323 626 aa, chain - ## HITS:1 COG:CAC1282 KEGG:ns NR:ns ## COG: CAC1282 COG0443 # Protein_GI_number: 15894564 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Clostridium acetobutylicum # 1 624 1 610 615 736 68.0 0 MGKIIGIDLGTTNSCVAVMEGGQPTVIANTEGARTTPSVVAFTKTGERLVGEPAKRQAVT NAEKTISSIKREMGSDYKVTIDDKKFSPQEISAMILQKLKADAEGYLGEKVTEAVITVPA YFNDAQRQATKDAGKIAGLDVKRIINEPTAAALAYGLDNEKEQKIMVYDLGGGTFDVSII EIGDGVIEVLSTAGNNRLGGDDFDQKITDYMLAEFKKNEGVDLSTDKMALQRLKEAAEKA KKELSSATTTNINLPFITATSEGPKHFDMNLTRAKFDELTHDLVEKTAEPVKRALSDAGL NSSELGQVLLVGGSTRIPAVQEEVKRLTGKEPSKSLNPDECVALGASVQGGKLAGDAGAG DVLLLDVTPLSLSIETMGGVATRLIERNTTIPTKKSQIFSTAADNQTAVDINVVQGERQF AKDNKSLGQFRLDGIPPAPRGIPQIEVTFDIDANGIVNVSAKDLGTGKEQHITITAGSNM SDDDIDKAVKEAAEFEAQDKKRKEGIDAKNDADALVFQTEKAMGEVGDKIDAADKEAVEA DCKALKEILEKANTETLTDAQIAEIKAGKEKLMESAQKLFTKVYEQAGAQAGAGQQGPGP DMGAGAGPAPDGFAGDDVVDGDYKEV >gi|224461045|gb|GG657759.1| GENE 725 752218 - 752901 965 227 aa, chain - ## HITS:1 COG:BH1345 KEGG:ns NR:ns ## COG: BH1345 COG0576 # Protein_GI_number: 15613908 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Bacillus halodurans # 61 225 29 192 194 88 39.0 8e-18 MENNQENKSKEDMVKEAVEEAKKAASEAADEQPEDQEAEGATEADGKTAEEAEDAKDNCG DEDSDEAEKADKKIKKFGKKPKKDKKDEKIEELTDRLTRQMAEFDNFRKRTDKEKSQMYE IGAKDIIEKILPVVDNFERGLDAAAEEKENPFVQGMDKIYKQLMTTLEEIGVKPIEAVGQ EFNPDFHNAVMHVDDEALGENIIAEEFQKGYMYRDSVVRHSMVKVAN >gi|224461045|gb|GG657759.1| GENE 726 752919 - 753962 1338 347 aa, chain - ## HITS:1 COG:CAC1280 KEGG:ns NR:ns ## COG: CAC1280 COG1420 # Protein_GI_number: 15894562 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Clostridium acetobutylicum # 7 342 3 340 343 217 37.0 3e-56 MVSEQRLDERKMKILHAVIQNYLETGEPVGSRTISKYTDLNLSSATIRNEMSDLEEMGYI LQPHTSAGRIPSDRGYRLYVDMLMEEKEQELNEMQEQMLDKADKMEQLLKQAAKVLANST NYATMVSTPLNSGNKIKFLQLSQVDEEQVIAVIVLGGNVIKNKIIDMEEPVSNENLLKLN MLLNTTLNGMSIEDINLGLIARLKEQAGIHSEVIGHVLDAVADVIQVDDEMQIYTSGATN IFKYPELSDKQSAQEIISAFEEKQQLTELVTQTLSQEDNTGIQVYIGDETPVQTMKDCSV VTATYELGEGMKGTIGIIGPKRMDYEHVLKSMKKLQNELDQMFHNND >gi|224461045|gb|GG657759.1| GENE 727 754230 - 754523 428 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568596|ref|ZP_03777621.1| ## NR: gi|225568596|ref|ZP_03777621.1| hypothetical protein CLOHYLEM_04673 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04673 [Clostridium hylemonae DSM 15053] # 1 97 1 97 97 171 100.0 2e-41 MKIYDSVKKEEVEIDGTKGLINVMKDGRQVDLYLKEKKTDEDGYLTWDVEHWSSVDGKRF IRCYSLEGRVLSESTGHNIYDLENDFKPEEAERAELS >gi|224461045|gb|GG657759.1| GENE 728 754699 - 755427 222 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 221 1 228 305 90 28 4e-16 MSVILRTNHITKRYGSRPVVSDLSMTIHKGDIYGFIGKNGAGKTTLIRMITGLAAPSDGN ILLFGKPDLLEGRRKIGTVIESPAFYPGMTARENLIAQCRLQGEDTAQADEILALVGLDD TGKKKAKNFSLGMRQRLAIAIALTGSPELLILDEPTNGLDPEGIKEIRELILKLNKEREI TVLISSHILGELSKFATRYGIIHQGKLIEEFTEDELWERCHGSDPHKSMDLEDYFLKRIG GM >gi|224461045|gb|GG657759.1| GENE 729 755429 - 756274 1003 281 aa, chain + ## HITS:1 COG:no KEGG:ELI_2348 NR:ns ## KEGG: ELI_2348 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: ABC transporters [PATH:elm02010] # 1 280 1 288 289 103 27.0 7e-21 MRNLLRNDFYKLGKAKYFWVCLIVTVVLAAASVFLLDFTYKIAGDQMSAQMEQQQKALDD NGVNITTEGVPASYDELSASGQLLSFFAGNTTLLLAVLVSLFVGSEFNNGTIKNIASRNY SRGKIYLSKLIVCIITGVVFTLIYAAVSTAVSSALWGFGDISAGYWPEFFKAAGIELLLG SAFVSIFVMFSMLIRQNGGSLAANICFLEFISLLVMLGEMLLKKLFHITATLSNYLIDTN MTAVSAGLTRATAIRGVTVAVCFLAAAAIIGIVSFQKRDIK >gi|224461045|gb|GG657759.1| GENE 730 756335 - 757651 1487 438 aa, chain - ## HITS:1 COG:BS_yrvN KEGG:ns NR:ns ## COG: BS_yrvN COG2256 # Protein_GI_number: 16079807 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Bacillus subtilis # 17 423 3 404 421 404 49.0 1e-112 MDLFDYAREKNMDNEAPLASRLRPATLDEVVGQQHIIGKDKLLYRAIKADKLSSIIFYGP PGTGKTTLAKVIANTTSAEFTQINATVAGKKDMEEVVKHAKELQGMYQKRTILFVDEIHR FNKGQQDYLLPFVEDGTLILIGATTENPYFEVNGALISRSSIFELHPLDKEDIRTLIRRA LTDVEKGMGSYQAVIEEDALEFLADIAGGDARNALNAVELGVLTTERSEDGKIHITLDVA SECIQKRVVRYDKSGDNHYDTISAFIKSMRGSDPDAAVYYLAKMLYAGEDIKFIARRIMI CASEDVGNADPMALNVAVSAAQAAERIGMPEAQIILSQAVLYVATAPKSNSAVNAIADAM ENVRQHKTTVPPHLQDSHYGGAKKIGHGIGYKYAHDYPHHYVEQQYLPSEIAGTRFYEAG SNGYEKKISEWMEYIRSR >gi|224461045|gb|GG657759.1| GENE 731 757638 - 758441 888 267 aa, chain - ## HITS:1 COG:CAC0908 KEGG:ns NR:ns ## COG: CAC0908 COG1179 # Protein_GI_number: 15894195 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Clostridium acetobutylicum # 5 236 6 249 251 243 52.0 3e-64 MINEFSRTELLIGAEKLHILRKSTVMVLGVGGVGSHCIEALARCGVGRLVLVDNDTVSLT NINRQSIAAHSTIGRFKTEVMRERIKDICPETEVVTYETFVLPDNVEELFSQRPDYVIDA IDTVTAKLAVVEKALEYGIPVISSMGTGNKLHAELFEIADISRTSVCPLCKVMRRELRAR GIRHLKVLYSKEKPVDISARASEEDKGSRRSLPGSISFVPPVAGLLIAGEAVRDIMAGSA AKGTYPCENEAEGTDPRQRGEERNGFI >gi|224461045|gb|GG657759.1| GENE 732 758462 - 759217 690 251 aa, chain - ## HITS:1 COG:SP1479 KEGG:ns NR:ns ## COG: SP1479 COG0726 # Protein_GI_number: 15901329 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Streptococcus pneumoniae TIGR4 # 71 249 270 448 463 157 39.0 1e-38 MEHQNKRRAIPGRPGRHKVLYFCGLAYTLCLFSILGISMDLNNKTGAEDSGQLKEAVDFV DSSVVREAPRIALTFDDGPNAQCTGRLLDGLKKRGVKATFFLIGMNAKDNPDLVKRIYEE GHLIGNHTYHHVDITKKSDEEARKEIEDTDKVISSVTGEHVEYMRPPFGVWQKNLELEMD VMPVMWSVDPLDWTTENTDEIVNKVVTETEENDIILLHDCYESSVDAALRIVDILQKKGF EFVTADKLIME >gi|224461045|gb|GG657759.1| GENE 733 759362 - 760732 1583 456 aa, chain + ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 4 447 1 444 468 199 32.0 8e-51 MPEIQKQENKMGVMPIPRLLITMSLPMMLSMLVQALYNIVDSMFVAQLSEDALTAVSLAF PIQTLMIAVAAGTGVGINALLSRNLGEKNYEGANDAARNGLFLGLISCVVFAVLGGIGSH FFFAIQTDNDVIVTYGTQYLTIITVLSFGIFLQITFERLLQSTGKTIYNMITQGTGAVIN IILDPILIFGLFGFPRLEVAGAAIATVIGQIVAVTMSFFFNLKKNREININMRGFRPHGR TIAVIYEVGIPSIIMQAIGSVMTFGMNKILLMFSSTAAAVFGVYFKLQSFVFMPIFGLNN GMIPIIAFNYGARNKKRITDTTKLSVIIAVVIMLAGFVIFQTSSGFLLKTLFDASDNMIE IGVPALRIISLSFLFAGYCIIVGSVFQALGNGMYSLIVSVARQLIVILPVAYIFATVFGL HMVWWSIPIAEIVSVILSTLLLKRIYRLKVRPLGEQ >gi|224461045|gb|GG657759.1| GENE 734 761308 - 761877 635 189 aa, chain - ## HITS:1 COG:FN1468 KEGG:ns NR:ns ## COG: FN1468 COG1853 # Protein_GI_number: 19704800 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 20 185 20 185 197 167 47.0 8e-42 MGKQLWKPGNMLYPLPAVMVSTADKSGESNIITVAWTGTICSDPAMLYISVRPERYSYHM IKETGEFVVNLTTERLARATDWCGVKSGRDVDKWKEMKLTKGKAQKLSYAPVIEESPVNI ECRVTEIKELGTHHMFMAEVAAVQADEDYMDKKGKFELNASGLLAYSHGEYMTLGRKLGK FGWSVKKKW >gi|224461045|gb|GG657759.1| GENE 735 761902 - 763548 1934 548 aa, chain - ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 7 547 3 536 538 283 34.0 7e-76 MGKKAGKVYVVGHKNPDTDSVCSAIAYAYLKKEITGEEYVARRAGQINEETHYVLEKFGV EPPALLSNVKLQVKDMDIHKIDGVAPNVSIKDTWAKMKANNVKTIPVLKEDELVGVISTG DIATSYMEVYDSTILSKAKTQYKNIIRTLDGRLVTGNEHGYFTKGKVAIGASNPDLMAEF IEKDDLVILGNRYESQACAVDVDASCIVVCQGAEVPEELILKAEEQSIVIISTPHDTFTA ARLINQSIPVKHFMSQGPLTTFRMSDYVEDIKEVMTKKKFRDFPILDRHGRFKGFISRRR FMDVSKKKVILVDHNEKSQAVDGIEEAEIVEIIDHHRLGSIETMGPVFFRNQPVGCTATI ICQMYEEAGIKPGRTMAGLLCCAIISDTLLFRSPTCTALDEQTARKLAKIADINMEEMAK EMFNAGSSLKGKSAEDICFQDFKQFTVNDAVFGVGQINSMSREELAEIKDMLKEHLPKVL KEHNLQMIYFMLTDILGESTELMCCGTGAKAYVTDAFDLPEDSEKIILKGVVSRKKQLIP ALVGVLQQ >gi|224461045|gb|GG657759.1| GENE 736 763744 - 764430 278 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228002590|ref|ZP_04049584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Anaerococcus prevotii DSM 20548] # 37 206 463 632 686 111 37 1e-22 MSEELLHDEAVNEPQTMADLEAHFDDANPWNVVKNYMEKGTVLPVKIEGIVNGGAIAMVE GLRGFIPASKLSLSYIEDLETYLLKDIEVQVIDVDQANNRLVLSAREILKEKERKEKEAK IASVKIGSVVKGTVESLQNYGAFVRLEDGLSGLVHVSQISQKRVKAPKDVLNTGDEVTVK IIGLKDGKISLSMKALEEVKEEVEEKVDIPKSENIGTNLGDLFKNIKL >gi|224461045|gb|GG657759.1| GENE 737 764445 - 764861 508 138 aa, chain - ## HITS:1 COG:no KEGG:SpiBuddy_2157 NR:ns ## KEGG: SpiBuddy_2157 # Name: not_defined # Def: C_GCAxxG_C_C family protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 8 136 9 135 141 92 39.0 4e-18 MTADKHTAVEKFRKDYNCCQAVACAYCEELGVKEEDVFRMTEGFGSGMGGLKDTCGAVVG MFLVISLAKSAGDMENPKTTKLETYDSILEAAEEFKEKNHSLYCRDLKTEEGGQPLACCV KCVEDAAKIVDKYLRRDH >gi|224461045|gb|GG657759.1| GENE 738 764891 - 766813 1952 640 aa, chain - ## HITS:1 COG:CAC1050_2 KEGG:ns NR:ns ## COG: CAC1050_2 COG0171 # Protein_GI_number: 15894337 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Clostridium acetobutylicum # 323 629 2 309 310 408 63.0 1e-113 MRQGFVKVAAATPDIRVADVAYNTEQICRLIEETADEGAKIIVFPELCVTGYTCGDLFTQ DILLTDARSALHRIAGFAKDKDALVFVGLPLSVDGELYNVAAALNRGAVLGLTTKTFLPN YGEFYEMRQFRQGPKEAREILFDGQVIPFGPQLLFESTVMDSLVVSAEICEDVWSPVPPS IEAAREGATIIVNCSASDETVGKESYRKSLIEGQSARLISGYVYANAGEGESTTDLVFGG HNIIAENGTVLRSGRRFENGVICSEIDVNRIAGERRKNTTFQTSGERKLFRIPFYIEETD TVLTRTFPSRPFVPGAGEERARRCEEILTIQAMGLKKRLAHARCSSAVVGISGGLDSTLA LLVTAKAFDALQLSRKGITAVTMPCFGTTDRTYQNACRMSQKLGAVLREVPIADSVSLHF KDIGHDPEDHSVTFENAQARERTQVLMDIANQTGGLVIGTGDMSELALGWATYNGDHMSM YGVNASVPKTLVRHLVHYYADTCGDEELKAILYDVLDTPVSPELLPPKDGEIAQKTEDLV GPYELHDFFLYYMIRFGYEPSKIYRIARLAFEGEYDNITILKWLETFYRRFFGQQFKRSC LPDGPKVGTVALSPRGDWRMPSDACAASWLEDLARVKPGQ >gi|224461045|gb|GG657759.1| GENE 739 766841 - 767716 1181 291 aa, chain - ## HITS:1 COG:SA0470 KEGG:ns NR:ns ## COG: SA0470 COG1281 # Protein_GI_number: 15926189 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Staphylococcus aureus N315 # 3 288 4 290 293 270 48.0 3e-72 MKDYIVRATAADSQIRAFAATTAEMTETARAYHNTSPVATAALGRLLTAGAMMGSMMKNE SDVLTLQVRGDGPLGGITVTADSSAHVKGYVNSPDVMLPAKNGKLDVGGAVGIGLLQVIK DMGLKEPYVGQTILVSGEIAEDLTYYFANSEQVPSSVGLGVLMNHDNTVRCAGGFIIQLM PFAKEETISRLEENLKKVTSVTELLDRGYSPEQLLGELLGDLGLEITDTVPTQFYCDCSK ERVEKAVASIGRKELEEMIGDGEDIEVKCHFCGAAYNYTIEELKEIIKRSR >gi|224461045|gb|GG657759.1| GENE 740 767737 - 768492 889 251 aa, chain - ## HITS:1 COG:BH1330 KEGG:ns NR:ns ## COG: BH1330 COG0500 # Protein_GI_number: 15613893 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Bacillus halodurans # 4 242 3 240 247 153 35.0 3e-37 MEAYTSFAQVYDTFMDNVPYEEWAEYIVGILSKYGIEEGIVLELGCGTGSMTELLADQGY DMIGADNSEDMLQIAMDKRSVSGHSILYLLQDMREFELYGTVRAVISACDSINYVTDPED LLEVFRLVNNYLDPHGIFLFDFNTEYKYREILGSRIIAEDREECSFIWDNYYDREQQINE YELTLFVQEEDSPLYRKYQETHYQRGYTLEQIQSLLKRAGLICLAAYDAYTEDAPLCSSE RICVIAQEQGK >gi|224461045|gb|GG657759.1| GENE 741 768654 - 770588 2367 644 aa, chain - ## HITS:1 COG:DR0075 KEGG:ns NR:ns ## COG: DR0075 COG1511 # Protein_GI_number: 15805116 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Deinococcus radiodurans # 252 586 806 1109 1467 97 28.0 7e-20 MRKSRKNKIMAGSMALVLAVSMAGVSCWHNMAAADVKAADKDVETLKEAAAEALGDTDTK TDGVYKDETVYVKADASGKATDTTVSEWLKNPGSGSFEDISGLKDIKNVKGDETFSQKGK ESVIWEAEGNDIYYQGKSEEALPVEVNITYKLDGKKIPAEKLKGKSGKLTIHIDYKNHSR QTVQVDGKDVEMYTPFTMVTALMLPTDEYKNVTVDSGKIVSDADKDIVLGLGFPGLTENL GLQDVDVKIPESVTITADVKKASAGTTITVVSSDLLDKFGLSDVNDFESFGDSIDELSGA AEQLKDGSSTLADGVNTLNSKTGDLKNGVNELADGVNAYAGGVSQLAGGSSEVAAGAAKL KNGAAKARQGINDAKAGADALMAGFDKPKDGATAGINNLSGGLTKLNNELQSASATGISD GQVEQLANALAQEAVNQLPADARDLISDQAAFTADLAAGYKSAIKTNMADKVNGQLGSMD TVKQTVSALANGAGSLQAGIAKLREGTAALQSGLGDLSAGGSDLVNGTTDLYNGAAALQQ GAAALNEKSSLLITGTSKLKEGSSQMGAGVGQLADGAGTLADGMAEFKADGIDKLTEVFK GDIEGVTSRINAMMTLGQNYRSFGGIRDGMEGNTKFVIETEAAQ >gi|224461045|gb|GG657759.1| GENE 742 770606 - 772687 2588 693 aa, chain - ## HITS:1 COG:BH0720 KEGG:ns NR:ns ## COG: BH0720 COG1033 # Protein_GI_number: 15613283 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Bacillus halodurans # 9 684 9 676 687 307 29.0 4e-83 MMVKIGKWIAKHKNIILVLGLLLIIPSIIGMNMTRINYDVLSYLPGSLETVKGQDTLVDE FGMGAFSMVIVEGMDEKDVVALKEEMKSVDHVADVIWYDDLMDISVPMEMIPSKYEKVFK NGDSTMLVALFDNTTSSDETMDAVTQLRKISAKHCFVSGMSGVVTDIKSLALSEMPIYVL IAVILCLIILSLTMDSWITPFIFMLSIGIAILYNMGTNMFLSDVSYITKALAAVLQLGVT LDYSIFLLNSYEENKKRFPGERNRAMAHAISNTFKSVVGSSVTTIAGFVALCFMTFKLGT NIGIVMAKGVAIGVVCCVTLLPALVLTFDKWIDRTTHKPILPDLGRLSAFITRHNKVWLA AFLILLIPAIYGNAHTDVYYNIDKGLPDTLKSSVANKKLDEDFHMNNVYMVMLKNDEMDQ KEKAKMMEQIEAVDGVKWAIGMESVIGPSVPEDFIPPAVKSKLQSDNYEIQFICSDYKTA TDEVNEQVKSIDKIVKSYNKESMVIGEAPLTKDLTVIADSDMRNVNVISVIAIFIIICIV FKSVSLPVILVAIIEFAICVNMAVPFYTGTELPFVASIVIGTVQLGSTVDYAILMTSRYQ RERSRGRSKEEAISLAHQSSMKSILISGVSFFAATFGVGLYSKIDMISSLCTLLSRGAII STVVVICVLPAMFMVFDKLICKTSKGFLPEEAE >gi|224461045|gb|GG657759.1| GENE 743 772790 - 773482 696 230 aa, chain + ## HITS:1 COG:no KEGG:Clole_0058 NR:ns ## KEGG: Clole_0058 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: C.lentocellum # Pathway: not_defined # 32 228 1 201 202 189 51.0 7e-47 MVIFLLYYVKLLKIVNGTSTFNSYAEQGERIMGKVDENKKKKKEALFNTAYELFVTKGIN GTSISDIVEKAGVAKGTFYLYFKDKYDVKNKLIAHKTHELFTKAGAAMEEAGVAGLEEQL IFIIDHIVNELVDNKALLNFISKNLVMGALRSALLTGESSDAVFYDKYMMLLENDSHTYT DEDVMLFTIVELAGSTCYNSILFEEPLPIGQYKPFLYRTVRLIIQSHRTT >gi|224461045|gb|GG657759.1| GENE 744 773536 - 774561 1084 341 aa, chain - ## HITS:1 COG:CAC1479 KEGG:ns NR:ns ## COG: CAC1479 COG0115 # Protein_GI_number: 15894758 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Clostridium acetobutylicum # 1 337 1 337 341 600 81.0 1e-171 MDKKNIDWSNLGFGYIPTEKRYVSNYKDGAWDEGTLTSDANVVINECAGVLQYAQTIFEG MKAYTTEDGHIVTFRPDLNAKRMVDSARRLEMPAFPEDRFVEAVKQVVEANAAYVPPYGS GATLYIRPYMFGSNPVIGVKPADEYQFRVFSTPVGPYFKGGAKPITIRVCDFDRAAPHGT GHIKAGLNYAMSLHAIMSAHEEGYDENMYLDAATRTKVEETGGANFIFVTKDNKVVTPKS DTILPSITRRSLLYVAEKYLGLEVEEREVYLDEVKDFAECGLCGTAAVISPVGKVVDHGR DICFQSGMDEMGPITKKLYDTLTGIQMGQIEAPEGWICQIC >gi|224461045|gb|GG657759.1| GENE 745 774669 - 775184 657 171 aa, chain - ## HITS:1 COG:PM0869 KEGG:ns NR:ns ## COG: PM0869 COG0440 # Protein_GI_number: 15602734 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Pasteurella multocida # 9 163 2 155 163 108 38.0 7e-24 MSNGTGMKKRWISLYVENQVGVLSKISGLFSGKSYNMDSLTVGTTEDPTVSRMTIATVSD DETFEQIKKQLNRLVEVIKVIDFTDIFVRMKEILYVKVRKCTPEDKVELFQIAETFKAKV IDYGKDSLLLEFVQTATKNDAVIKLMKEEFQSIEVVRGGSVGIESISMMER >gi|224461045|gb|GG657759.1| GENE 746 775200 - 776921 2026 573 aa, chain - ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 2 570 7 559 564 584 51.0 1e-166 MKRISGNKLLVKALREEGVDTLFGYPGACTIDISDELYKQDYTKVILPRQEVALVHEADA YARSTGKVGVCLVTSGPGATNLVTGLATANYDSVPLVCFTGQVARHLIGNDAFQEVDIVG ITRSITKYGITVRDREDLGRIIKEAFYIARTGRPGPVLVDLPKDVMEELGPAEYPQEVNI RGYKPNTHVHIGQLKRAIKMLGKAKRPVFLAGGGINIARANEAFTELAEKTNVPVITTVM GRGAIPTDHPLYVGNVGMHGAYAANMSVNECDLLFSIGTRFNDRITGKLHSFAPHAQIVH IDIDTAAISRNVQVDVPIVADAKEAVERMLEYVTECGTKEWLDEVNEWKSSHPMTMKQKP IMTPQDIIEKMNEMFDEAIIVTDVGQHQMFAAQFVELTQKKRLLMSGGLGTMGYGLPGAI GAKIGNPDIPVISISGDGGMQMNIQELATAVLEELPIISCIFNNNNLGMVRQWQKLFYGK RYSMTCLRAGAACRGKCGEVACPEYTPDFIKLAESYGAKGIRVTKKEEIEAAFEEAKKST KTPVIIEFTIDPEDLVYPMIQPGGTLEDMILDC >gi|224461045|gb|GG657759.1| GENE 747 777283 - 778476 1022 397 aa, chain - ## HITS:1 COG:MTH450 KEGG:ns NR:ns ## COG: MTH450 COG0438 # Protein_GI_number: 15678478 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Methanothermobacter thermautotrophicus # 139 369 153 385 411 88 29.0 2e-17 MNILSITAQKPESTGSGIYLTELVRTFAARGHRQAVVAGIYRDDEPQLAEGTEFYPVYFS SGALPFYIAGMSDEMPYKSTRYCDMTDEMAKQFENAFLDVVRRAVEEFKPDLILCHHLYL LTALVREHFPKQRIYGFCHNTDLRQMRKNPLRRGYIAEQIRRLDAVFVPQTAQAEGVVQI YRMPPDRIHISGSGYNQEIFRKVEGLRQRDGILRLVFAGKIAEKKGVMSLLRSLRYLPYD RESLVLRLAGGAGNEEEYREIVRLAEEAPYRVELLGKLSQKELATVYNESDIFVLPSFFD GLPLTVIEALACADKVVMTDFPGIQDWLKEQAPGAPVFYVPLPQMQNTDEAVPESLESFE RGLAEKIKECAEFAMDGAVDMTHLSWENICERILEIS >gi|224461045|gb|GG657759.1| GENE 748 778473 - 778964 597 163 aa, chain - ## HITS:1 COG:BH3450 KEGG:ns NR:ns ## COG: BH3450 COG0262 # Protein_GI_number: 15616012 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus halodurans # 1 161 2 159 163 119 40.0 2e-27 MNLIVAVDKNWAIGAGNKLLVSIPQDMKFFRETTKGKVVAMGRKTLESFPGGQPLKNRVN IVMTTDKAYSTNGIVLVHSLEEMLCELKKYPSEDIYVIGGETIYRQLLPHCDRAYITRID HAYDADTYFPNLDEDPQWKMTKTSEEQTYFDLEYAFTVYERVS >gi|224461045|gb|GG657759.1| GENE 749 778977 - 779825 1042 282 aa, chain - ## HITS:1 COG:BS_thyA KEGG:ns NR:ns ## COG: BS_thyA COG0207 # Protein_GI_number: 16078831 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Bacillus subtilis # 1 275 1 273 279 216 43.0 3e-56 MSYADKVFIDMCRDIIDNGTDTKGEKVRPVWEDGTPAYTVKKFGVVNRYDLSKEFPALTL RRTGIKSCTDELLWIWQKKSNNIHDLNSHIWDSWADEDGSIGKAYGYQMGVKHQYKEGMF DQIDRVIYDLKHNPYSRRIMTNLYVHQDLHEMALYPCAYSMTFNVTKEKGSDRLTLNGIL NQRSQDVLAANNWNVCQYSVLLHMLAQVCGMKAGEFVHVIADAHIYDRHIPMIEELIARE PLPAPAFWLNPEIKDFYEFTRDDVKLIDYNTHEQIKNIPVAV >gi|224461045|gb|GG657759.1| GENE 750 779941 - 780225 322 94 aa, chain - ## HITS:1 COG:no KEGG:Clocel_2128 NR:ns ## KEGG: Clocel_2128 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulovorans # Pathway: not_defined # 1 88 1 88 95 113 62.0 2e-24 MSVVIIGGNERMEQQYKQICRRHKYKAKVFTRMSGNLKTQIGQPDLIILFTSTVAHKMVH CALKEAERYNIRVERAHSSSANALDTVLQSVKTA >gi|224461045|gb|GG657759.1| GENE 751 780256 - 780687 650 143 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 1 139 2 139 142 108 48.0 4e-24 MSIPVVYWSGTGNTEQMAEAVAAGIKAAGQEADLCSVGGADAGRLADEKAFALGCPSMGA EELEESEMEPFVQALEGNVAGKTVLLFGSYGWGDGEWMRTWEERMKNAGALLVNGGGVIA NEAPDDSAVKACEEAGKALAAAV >gi|224461045|gb|GG657759.1| GENE 752 780719 - 781327 621 202 aa, chain - ## HITS:1 COG:no KEGG:Closa_2904 NR:ns ## KEGG: Closa_2904 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 19 202 3 185 187 114 35.0 2e-24 MPIEVVSYMLSVEDVKRRLQFQLILQCAPFLKGIKVACITNVDKEVCRELRTVLAGTGIE YRILTVRKGRCLVFFFRREAFKAYLNRKDIREFLSLYGYGCAGGEADVDGILQRLSARVC RYSKEDIAFPHEIGAFLDYPLEDVKGFIDNGGRNCLITGYWKVYGDAEKAQMMFLAYDKA KTSAVNEFLVGRHIRDIACAAA >gi|224461045|gb|GG657759.1| GENE 753 781575 - 782006 473 143 aa, chain - ## HITS:1 COG:no KEGG:Clole_3441 NR:ns ## KEGG: Clole_3441 # Name: not_defined # Def: MarR family transcriptional regulator # Organism: C.lentocellum # Pathway: not_defined # 1 141 1 141 142 110 43.0 2e-23 MQERLPVGFVFKQINNVYEKEFNNLLRTLGITASQCAVLDYLFSSRKEEVNQRDIEKALS LKNPTVTGLLKRLDEKGFILIVPSNKDKRCKIVYLTEKAYDIQRRMEADRKKIDKKLTIG MTKKEVEALQRMLGKVLYNISDP >gi|224461045|gb|GG657759.1| GENE 754 782100 - 782813 1075 237 aa, chain - ## HITS:1 COG:CAC1482 KEGG:ns NR:ns ## COG: CAC1482 COG1811 # Protein_GI_number: 15894761 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Clostridium acetobutylicum # 1 233 1 234 242 228 56.0 1e-59 MPVGVIVDSICVFAGGIAGAFLGKRLDKNLCSTLTLVFGVCSMTLGITSITKMEQMPAVI FAVILGTVAGELLHLEKGIAKAAEKVQAPVARIMKTDTKDSRDTFMAEFISIVVLFCASG TGIFGALQSGITGDHTILISKAILDLFTAAIFAASLGFIVSLVAVPQFVILMLLYLCAGL IMPLTTDTMLADFTACGGVLMLATGFRIAGIKQFPIANMLPAMAFVMPFSWIWTQVM >gi|224461045|gb|GG657759.1| GENE 755 782951 - 783511 801 186 aa, chain - ## HITS:1 COG:no KEGG:Closa_2162 NR:ns ## KEGG: Closa_2162 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 178 1 178 190 150 42.0 2e-35 MKKIKSLFTDSFHELRNLKTLAMTAMLLAIAVVLGFYTLQLTDYIKIGFAYIANELTGMM FGPVVGSVMGGLADLVKYLVKPTGPFFPGFTISGFLGGLIYGIVLYKRPLSIRRIIVANG LVTVLINLLLNTYWLTLLYGNTFVALFPARIVKQIIMMPIEVVLFYAVAKVLSRAHLFAG QGSVAK >gi|224461045|gb|GG657759.1| GENE 756 783702 - 785090 1496 462 aa, chain - ## HITS:1 COG:FN0944 KEGG:ns NR:ns ## COG: FN0944 COG0534 # Protein_GI_number: 19704279 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 2 457 3 455 455 425 49.0 1e-119 MERLEKQNPLATEKVGRLIAKFAIPAIISMLVSSLYNIVDQIFIGQGVGMLGNAATNIAF PVSIICTATALLLGIGSASNFNLESGAGNTERAAGIAGTGLSVLAVSGVLIAVIVLLFLD PLLHLFGVTPDVLPYAQDYTGITAFGIPFLVLTTGGNHLIRADRSPTYSMTCMLTGAIIN TILDPLFIFGFHWGIKGAAWATIIGQIISGLMVIIYFARFRHMELSASLLRPKGSYLKAI ASLGMASCINQIAMAVVQITMNNTLRHYGASSMYGTDIPLACVGVISKVNMVFMAICIGI SQGCQPIWGFNYGAGNFGRVKETYKKAAVISLAVGILFFVGFQIFPRQLVSIFGSGSEEY FHFAERYFRIFMFMTFVNGLQPMSSGFFTSIGKAKLGIVVSLTRQVIFLLPLIVIFPLFM GIDGVMYAGPIADAAAAAVAIVYAYRELKKFNHCPAKENVLE >gi|224461045|gb|GG657759.1| GENE 757 785107 - 786393 1718 428 aa, chain - ## HITS:1 COG:BH3422 KEGG:ns NR:ns ## COG: BH3422 COG0460 # Protein_GI_number: 15615984 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Bacillus halodurans # 7 426 5 426 431 358 45.0 1e-98 MTEKRTIKAGLLGLGTVGSGVYKLMERQQKEMVHKVGASLCIEKILVHNMDKKREGVDMS LLTDKWTDIIDNDEIEIVIEVMGGIEPARTMILEALNSGKNVVTANKDLVAEYGKELLDA AENNGVDFLFEAAVAGGIPIIRPLKQCLASNEIDEVIGIVNGTTNYILTKMFEDGMDFKE ALAKATELGYAEADPTADIQGLDAGRKVAIMASIAFHSRVVFPDVYTEGITGITARDIQY AREFGSVIKLLGVAHNTEDGIEVGVYPMLLPKDHPLASVRDSFNAVFVHGDAVDDAMFYG RGAGELPTASAIMGDVIDVARDIQYHCTGRISCTCYRKTPIKRFDDVKNKFFLRMQVDNK PGVLAAIASVFGVHKVSISKVVQKIITDGTAELVIVTEAVKEYHMQDALEHLKDMETTRE ISSIIREY >gi|224461045|gb|GG657759.1| GENE 758 786485 - 787033 473 182 aa, chain - ## HITS:1 COG:CAC1418 KEGG:ns NR:ns ## COG: CAC1418 COG0778 # Protein_GI_number: 15894697 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 9 181 7 179 179 89 31.0 3e-18 MEFMDMQLKRESCRIYSEKPVSREMLIRLVDVARLSPSGCNAQPWRFIIVDEPEARRKVM EALYDGELTGCPWGDKVPAFILICEDEAHLMPGVGEHYGSQHFAQMDIGMAAMALCCEAA SIGLGTCMIGTMSQEKLHKAFDIPAERTVRLIITVGHPAREGAPRKKNRKSLEEILSFNQ WQ >gi|224461045|gb|GG657759.1| GENE 759 787078 - 787275 68 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKIPKKVLTIRRVYSILVIVLRNKNTTYATVAQLVEYDLAKVGVAGSNPVCRSHGTGYA CSFFS >gi|224461045|gb|GG657759.1| GENE 760 787345 - 788568 799 407 aa, chain - ## HITS:1 COG:no KEGG:ELI_4338 NR:ns ## KEGG: ELI_4338 # Name: not_defined # Def: putative signal peptidase I # Organism: E.limosum # Pathway: not_defined # 2 178 5 187 231 115 36.0 3e-24 MKKVLKVISNLITGILIAGLLTYIAVMRFFPEQLKERLGYQTFVILTDSMEPTIPVDSLV VVRNLGDEEEIKENEIISFRVDRLGDDVIFTHYFKKKEIDETGKERYYTIAENAERYDDY VTYREDILGTYQFHIPYAGKLVRFLQSPFALLELGLICIFLIIYHILWNKFDNEEKLLVE IAETGNVIDSGLDKAPPETESVCVIPKEEPSSSIMEAEETAAVDATAEEAEELCAKPEMV NGQPEISGKVLFGYRMAPSSGAFESGSAGFSLTVDVDGTMRYEAYAGGKGREAVRDSRLS GRSLKKLKKIMKDSQLVIRNLPETLDNGFSIGRGSFFIFRGRMVTAWNIRHNNLKKMKAK DYTYYKKYKKNMKHENDVLELFKKIRNVLREEGIKINLDSAEIKAGK >gi|224461045|gb|GG657759.1| GENE 761 788688 - 789191 515 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568632|ref|ZP_03777657.1| ## NR: gi|225568632|ref|ZP_03777657.1| hypothetical protein CLOHYLEM_04710 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04710 [Clostridium hylemonae DSM 15053] # 1 167 1 167 167 248 100.0 8e-65 MQKLGKKKILGLLTAAAIVATTVGSFAVWDTLSTKSNGTLTVASPIVVKTQDIGEFTETK ASLEATPSYNKNVTFEVDGLANAADKQLKLGCKITDGSNVDQTGNFTVEITGTGNNAVTN NVDPSVEASNTYTVTITPNDTPEAKAIAGQALNVEVTGTLGDAPSTP >gi|224461045|gb|GG657759.1| GENE 762 789323 - 790237 981 304 aa, chain - ## HITS:1 COG:L0219 KEGG:ns NR:ns ## COG: L0219 COG0583 # Protein_GI_number: 15672313 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 302 1 299 301 91 24.0 1e-18 MELKHLKYFVEIAEQKSMRKAADRLYVTQPNLTRAMQNLEDEMGTRLLVRSNHGVSLTTT GESLYYYAQSVINQLNEIDALKLKDKEFMQNRLDLSVGNIILKDEIMLDFYENLRTRHAN ISIYETSIEKVLVNVSKLEAEIGIIAVNTEQCPALNKILEIKGLEVHEIASSPLYVHVGG NSPLYGRGCIEPEELLQHTYVHLPYDYFSNINRVVTLGDIRVMDFKRTIVINNYHAIVSM IKRTDAFIFGGKWQIDELKKGHIDSLMLNNCGVGKKLMWIKRKKEILSVQARGFLDILME NYAD >gi|224461045|gb|GG657759.1| GENE 763 790253 - 792040 2189 595 aa, chain - ## HITS:1 COG:CAC2269 KEGG:ns NR:ns ## COG: CAC2269 COG0173 # Protein_GI_number: 15895537 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 595 1 593 595 728 60.0 0 MAESMQGIKRTHRCGELSGANAGQTVTVMGWVQKNRNKGGLVFIDVRDRSGIIQIVFEEG STDSGLIEKAAKLRAEFVVAVTGEVKKRSGAVNENLSTGDIEIIPSQLRILSESETPPFP IEENSKTKEEVRLKYRYLDLRRPDLQKNMIMRSQVATLTRQFLAEEGFLEIETPILIGST PEGARDYLVPSRIHQGHFYALPQSPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQPEF TQIDMELSFVDVDDVIDVNERLLAKLFKDVLGVEVVLPIPRMTWQEAMDRYGSDKPDTRF GMELTDVTDVVKDCEFAVFKGAIENGGTVRGINAKGQGGMPRKKIDKLVDFARDFGAKGL AYIAVQEDGSVKSSFAKFMKEEEMSGLIEAMGGENGDLLLFAADKNKVVWDVLGNLRLEL ARQMELLDKSEYKFLWVTEFPLLEWNEEQERYTAMHHPFTMPMEEDLEYIDTDPGRVRAK AYDIVLNGNEIGGGSVRIYHQDVQNKMFEVLGFTPEKAQEQFGFLLNAFKYGVPPHAGLA YGLDRMVMLMAKEDSIRDVIAFPKVKDASDLMTEAPTAVEEKQLEELGLSVTVQE >gi|224461045|gb|GG657759.1| GENE 764 792069 - 793334 1580 421 aa, chain - ## HITS:1 COG:APE0662 KEGG:ns NR:ns ## COG: APE0662 COG0124 # Protein_GI_number: 14600873 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Aeropyrum pernix # 4 346 8 334 438 207 37.0 3e-53 MALKKKPVTGMKDMLPKEMEIRDHVIWLIKETYKTYGFSSMETPCVEHIENLCSKQGGDN EKLIFKILKRGEKLKIEDAKEENDLVDGGLRYDLTVPLARYYANHANELPSPFKAMQIGN VWRADRPQRGRFRQFMQCDIDILGEQSNLAEIELILATTAMLGKLNLKNFTVCINDRNIL KAMAAYSGFKEEDYDEVFIILDKMDKIGSEGVSAELQELGYAKENVDTYLKLFDEISPGV EGIGYLREKLGAHLPAETADGMELIISSVEAAKEADFQMKFDPTLVRGQSYYTGTIFEVT MDEFGGSVAGGGRYDKMIGRFTGQDTPACGFSIGFERIVMLLLENGYEVPGKGAKKAYLL EKKLSPEGMLRVLSLARADRENGLQVMIANMKKNKKFQKEQLESEGYTQIIECYCDSIDS L >gi|224461045|gb|GG657759.1| GENE 765 793325 - 794791 1384 488 aa, chain - ## HITS:1 COG:CAC2271 KEGG:ns NR:ns ## COG: CAC2271 COG0635 # Protein_GI_number: 15895539 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 1 482 1 467 476 313 36.0 5e-85 MIEIICSDELYTYNVYHITKAFFPSEKVEQSVERTCADAVRVTLPDGTVLLAERAADRCA DRQERKRCVDREIYTGLEQYTGRSLAWGLLTGVRPSKIAMKELEGGAQMEEFLRSFQEQY FVSGEKAQLAWEIAGREKALLEQLDYEDGYSLYVGIPFCPSVCTYCSFSSGALEAWKDRV EDYLDALMKELAYIGKVSAGKKLNTVYIGGGTPTTLTACQLERLLDCIDSNFSREHLLEY TVEAGRPDSITKEKLSVLYRHRITRISINPQSMQQKTLDLIGRRHTVEDIVRTYALARET GFDNINMDLIAGLPGESAADMRDTLRQAEALAPDSLTVHSLAIKRAAQMGQEQSARGYVE ALERDTGTMAQVMTEMIRAAAESARRMGLLPYYLYRQKNIAGNFENVGYAKVDKAGIYNI LIMEEKQSIIAAGAGASTKIVLKEAAELPGSKNGKKTNLVRIENVKAIDAYIARIGEMIE RKGEWLWH >gi|224461045|gb|GG657759.1| GENE 766 794890 - 795510 728 206 aa, chain - ## HITS:1 COG:CAC2272 KEGG:ns NR:ns ## COG: CAC2272 COG0491 # Protein_GI_number: 15895540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 1 206 1 199 199 176 44.0 2e-44 MKVEKFVTGIISTNCYLAVNEETRQTAVIDPAACPSYLMGHIKSEGLKIEAVLLTHGHFD HIMGLDGFLKEYDVPVYLHRDDEQLIKDPGLNQSGVYTSGYTFGSATYIEDNETLKTAGF EFKVLHTPGHTPGGVCYYAEAEKVLFSGDTLFQSSVGRTDFPLGSMSDLVRGIREKLMVL PDDVLVYPGHMGETTIGYEKSHNPFL >gi|224461045|gb|GG657759.1| GENE 767 795526 - 797868 2745 780 aa, chain - ## HITS:1 COG:BS_relA KEGG:ns NR:ns ## COG: BS_relA COG0317 # Protein_GI_number: 16079814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Bacillus subtilis # 48 777 10 731 734 702 49.0 0 MSEKMIYESENRIAPESIADEISKGLEIVDGHAVKAPGDYEDPDQLYDMLIARIRKYHPS TDVSMIEKAYETARKAHGDQCRKSGEPYIVHPLWVAIILANLEMDKETIAAGMLHDVVED TSVSEEEIKKNFGEEVALLVDGVTKLGRLSYSSDKLEVQAENLRKMFLAMAKDIRVIIIK LADRLHNMRTLQFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFF DLVNQINSRKTEREEFVQQIVDEVSTHMKNANIKADVNGRVKHFFSIYKKMVNQEKTVDQ IYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQ PFEIQIRTEEMHKTAEYGIAAHWKYKESNDGKKSVQAQEEEKLSWLRQILEWQRDMSDNR EFLNLLKGDLDLFAEDVYCFTPQGDVKNLPNGSTPIDFAYAIHSAVGNKMVGARVNGKLV NIDYKIQNGDRIEILTSQNSKGPSRDWLGIVKSTQAKNKINQWFKKEFKESNIVKGKEMI AAYCKAKAITQSDIMINRYMEIVQKKYGFKDWESVLAAIGHGGLKEGQVVNRLVEEYGKE HKQEMTDEVVLERVAEASKNKVHIAKSKSGIVVKGIDDMAVRFSRCCNPVPGDEIVGFVT RGRGLSIHRTDCVNMIHLTEGERVRLIDAEWESEVAEQNGGQYLAEIKMFAHDRQGLLME MSKIFTEATVDVKSMNVRTSKQGTATIETGFIVHGREELDTIVKKLRQVEGVMDIERTTG >gi|224461045|gb|GG657759.1| GENE 768 797904 - 798428 596 174 aa, chain - ## HITS:1 COG:TM1384 KEGG:ns NR:ns ## COG: TM1384 COG0503 # Protein_GI_number: 15644136 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Thermotoga maritima # 4 171 6 173 173 189 55.0 2e-48 MKPIEEYVRSIPDFPEQGIIFRDVTSVLQDADGLHLAVDLMQEKLDGVEFDVVVGPESRG FIFGVPIAYNLHKPFIPIRKKGKLPCETVSIQYELEYGTAELEIHRDAVKEGQKVVIIDD LIATGGTNEAMIKLVEGLGGKVVKAVFLMELSGLEGRKRLKGYDVESVIAYPGK >gi|224461045|gb|GG657759.1| GENE 769 798518 - 800278 2112 586 aa, chain - ## HITS:1 COG:CAC2232 KEGG:ns NR:ns ## COG: CAC2232 COG0608 # Protein_GI_number: 15895500 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Clostridium acetobutylicum # 1 586 1 587 587 570 46.0 1e-162 MEQWILLRKGADFEELGRKFGISPRLACLIRNRDVIGPEAVDRYLNGTITDLYDGMLMKD MDKAVEILREKIEENRKIRIIGDYDIDGVNATYILLKGLRKSGACADSDIPDRIKDGYGL NIELIERAYRDGIDTIVTCDNGIAASEEIAYGKRLGMTVIVTDHHEVPYESEGEEKNYIL PAADAVIDPKQPGCGYPFKGLCGAAVAYKLIEALYEAMGNEADDLDDLLENVAVATVGDV MELVDENRILVREGLERLRRTVNPGLGALIECTGIDREKLNSYHIGFVLGPCLNAGGRLD TAKRALDLLCAERKKEADILAGDLKALNDSRKEMTAAAVEQAVQMIETTSLGKDRVLAVY LPDCHESLAGIVAGRLRERYCRPAYVMTDAEDGVKGSGRSIEAYHMYEELAGCRELLTKY GGHMMAAGFSLEKENVEQFRRRLNENCTLKESDMREKVVIDMEMPFSCVTEDIVRELKYL EPFGNGNKKPVFAARKVELLGGQIFGKNRNVLKMRVKDAAGNETEAVYFGDTGRFCSYLE EQYGKEALKQFLGRRRSKMTLSVTYYPEVNEYMGSRTMQIVITHYQ >gi|224461045|gb|GG657759.1| GENE 770 800350 - 802515 2977 721 aa, chain - ## HITS:1 COG:CAC2278 KEGG:ns NR:ns ## COG: CAC2278 COG0342 # Protein_GI_number: 15895546 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Clostridium acetobutylicum # 2 400 3 401 417 293 44.0 7e-79 MKKSKGILSLVVAAALIALLAFTTVAGFGKGKTGSAENIKLGLDLAGGVSITYQVKDKNP SEEEMRDTIYKLQKRVEQYSTEANVYQEGDDRINIEIPGVSDANAILDELGKPGSLVFQT QDNETVITGSDVKTASARAGEDDMGNKEYSVELDLNEEGTKKFAEATEANVGKPISIIYD GETISSPTVQTAITGGQAYITGNFSYEEAESLASTIRIGGLKLELEELRSNVVGAQLGEQ AISTSLKAGAIGLAIVFLFMICVYLLPGLASSLALIIYTGLVLVILNAFNVTLTLPGIAG IILSIGMAVDANVIIFARVREEMSKGKSVRNSLKTGFQKAMSAIVDGNVTTLIAAAVLWF KGSGSVKGFAQTLAIGIIVSMFTALVITRMIVYAFYAVGLRKEKLYYRPRKERKPIDFLG RKKWFFALSLAVVILGFVFMGVNGSKGKGAFAYSLEFEGGTSTNVTFNKDYTIEEIDKEI VPVVEEVTGDANVQTQKVADTNQVIIKTKTLGLDVREALNKALADKFKVDESLITAENIS STISNEMRQDAIMAVIVATIFMLIYIWFRFKDIRFAASAVTALLHDVLVVLTFYAVARIS VGNTFIACMLTIVGYSINATIVIFDRIREELRLRSKTTELVDVVNKSITQTLTRSIYTSL TTFVMVAILFVMGVSSIREFALPLMVGIICGAYSSVCITGALWYVMRTKIGKKAAETKKK R >gi|224461045|gb|GG657759.1| GENE 771 802533 - 803939 1419 468 aa, chain - ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 1 463 3 454 454 478 48.0 1e-134 MIHQYKNNGYNIVLDVNSGAVHVVDELCYDVIEQLGRERDTWTAESLRAPELPERLREHL GGAYDSSDIGEALADAAELTEAGRLFTSDTHEGLIEEVKKRKTVVKALCLHIAHDCNLAC RYCFAEEGEYHGRRALMSYEVGKKALDFLIANSGSRHNLEVDFFGGEPLMNWQVVKDLVA YGRSQEKIHDKHFRFTVTTNGVLLNDEIQEFVNREMDNVVLSLDGRKEINDRMRPFRNGK GSYELIVPKFQKLAESRNQEKYYIRGTFTRNNLDFAEDILHFADLGFKQMSIEPVVGEET DPYAIQEEDLPAIMQEYDRLAQIMIGREKEGKGFNFFHFMIDLDGGPCVAKRLSGCGSGT EYLAVTPWGDFYPCHQFVGQEEFLMGNVEEGIVRPEIADEFRSCNVYSKEKCKNCFAKFY CSGGCMANAYNFHGTIHEAYEIGCEMQRKRVECAIMMKAALAEEDLEG >gi|224461045|gb|GG657759.1| GENE 772 804020 - 804163 171 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHVKTLNTQTLNHTVKKGGCGECQTSCQSACKTSCTVGNQTCEQKK >gi|224461045|gb|GG657759.1| GENE 773 804247 - 804621 565 124 aa, chain - ## HITS:1 COG:no KEGG:Closa_0598 NR:ns ## KEGG: Closa_0598 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 124 2 119 119 68 44.0 1e-10 MERRIQKDSKVMWVLKSLLASYIITGIMLLVLTVLLYKMDLNEKAVSAGIVAIYVMATLV GGIIIGKLARVRRFVWGLGLGIGYFALLLLITLGVYHTLNGNGANLITTFILCAGGGMVG GMIS >gi|224461045|gb|GG657759.1| GENE 774 804675 - 805223 740 182 aa, chain - ## HITS:1 COG:CAC3214 KEGG:ns NR:ns ## COG: CAC3214 COG2002 # Protein_GI_number: 15896461 # Func_class: K Transcription # Function: Regulators of stationary/sporulation gene expression # Organism: Clostridium acetobutylicum # 1 182 1 183 183 195 56.0 3e-50 MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGEIILKKYSPIGELSAFAR QYAESLAQTMGCLVCVSDMDQIVASAGGGKKDFQDKYISKQLEKALEERNPILAAAGDKK FMKTINDQDDEYHYQVIHPIVCEGDVIGGVIFLTKESKKKFSELEQKMAACAAGFLGRQM EQ >gi|224461045|gb|GG657759.1| GENE 775 805419 - 805865 264 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 144 1 143 147 106 41 6e-21 MSKIEEVRSDMIGAMKAGDKETKETLSMLLAALKNKAIDKRSDLTEEEETQVILKEIKQT KETLEMTPADRTEIIEECTKRLSVLESYAPKMMDEAEIREITAATLKELGIETPAAKDKG RIMKTLMPKVKGKADGKLVNDIVGSFFK >gi|224461045|gb|GG657759.1| GENE 776 805946 - 806998 1317 350 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0113 NR:ns ## KEGG: Cphy_0113 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 27 323 77 370 377 110 28.0 1e-22 MKKRVLLFAITGLLAAGVLTGCGSIDENDVVATVGEKEITADVANFFARYTQAQYETYYS GYLGDDMWNTDASEGETYEEFVKDSVLNELEKMIVLEEHMGDYDVSLTEEEKAVIEKSAK AFDEANTLESKEKISGSRKTVKRVLTLMAVQKKMAEAIEAGADTEVSDDEAAQKSMQYVL FPYKTTDDSGKSSDLSDEEKAEAKKKAGSFAEGAGTADDFSALATEQGVEAQTATFDSES TSPAEDVVKAADALGEGEVTGVIETDSGCYVAKVTSLLDREATDSKKESIVQERKTKLYN DTCDKWIKKAGVKVNKGVWRKVDFNDLSVTIKQSSEEPYSDGAKTDDQAE >gi|224461045|gb|GG657759.1| GENE 777 807050 - 810391 3889 1113 aa, chain - ## HITS:1 COG:CAC3216 KEGG:ns NR:ns ## COG: CAC3216 COG1197 # Protein_GI_number: 15896463 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Clostridium acetobutylicum # 1 1112 3 1169 1171 903 43.0 0 MQALIRPLEELAEFEELQKTKTGRPGMIQISGCVNSQKTHMMYALSDGCHYKVIACSSES KAKQIYEEYRFLDPNTYLYPAKDLLFYQADLRSRELVKQRMEVIQAVISGQAMTVVTSFD GFMDALLPKEEIQRRTITVRNDSAVDLSKMEKELAGLGYDREVQIEGPGQFAVRGGILDV YPLTEELPVRIELWGDEVDSIRTFDVGTQRSIENLEEVVIYPASEFPEEGEQRVSFLDYF ERERTLLFLDEPVRLLEKGKGVEDEFLEAQKRRLESGYDITDAEAQLYHTDEIVRRMNGY SSIGFFALEMRSRGLDVRGSVSLMTKSVNPYNSSFDMLTQDLKRLKRNGYRVVLLSGSRT RARRLAEDLRDYNLSSYYSDEMDREVASGEIMTAYGHVAEGYEYPMLKFTVIAETDIFGK VKKKKKRKSYEGRKIQSFSELKPGDYVVHENHGLGIYQGIEKIEVDKVAKDYMKISYAKG GNLYIPATQLDLIQKYASADAKKPKLNRLGTQEWTKTKKKVRGAVKEIARDLVALYAARQ EQEGYVYGADTVWQQEFEEMFPFEETEDQLLAIEAVKRDMQSRRIMDRLICGDVGYGKTE IAIRAAFKAVQEDKQVVYLVPTTILAQQHYNTFVQRMRDFPVRIDLMCRFRTPAQQKKTA QDTKRGLVDIVIGTHRVLSNDMEFKNLGLLIIDEEQRFGVQHKEKIKKLKENVDVLTLTA TPIPRTLHMSLIGIRDMSVLEEAPNDRMPIQTYVMEYNDEMVREAIERECSRQGQVYYVY NRVEDIAEITARIQKLVPEVSVAFAHGQMKEHQLEKIMYDFINGEIDVLVSTTIIETGLD ISNVNTMIIHDADRLGLSQLYQLRGRVGRSNRMAYAFLLYRRDKMLKEVAEKRLAAIREF TDLGSGFKIAMRDLEIRGAGNLLGAQQHGHMEAVGYDLYCKMLNEAVKHLKGEMEEETYT TTMDLNVDAFIPDSYIPNEYQKLDIYKRIAAVETEDEMEDMVEELIDRFGDIPKKVETLL SVARLKALAHSVYVTAVEQKGETCTFVMYEKAKVHPERIPDLLEEFKGVLMFKADTPPYF MYEKRSRNKKEKNEDILQVVKNVLIGIKGLIDA >gi|224461045|gb|GG657759.1| GENE 778 810394 - 810978 756 194 aa, chain - ## HITS:1 COG:CAC3217 KEGG:ns NR:ns ## COG: CAC3217 COG0193 # Protein_GI_number: 15896464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Clostridium acetobutylicum # 1 186 1 183 187 194 54.0 1e-49 MFIIAGLGNPTLQYEGTRHNVGFDVIDTVARKYNISVDYRKNRAYIGKGIIAGQKVLLAK PQTYMNLSGESIRGLVDYYKVDEESQLLVIYDDVSLGAGQLRIRKKGSAGGHNGIKSIIS CLGTDIFPRIKVGVGEKPKRYDLADYVLGHFSREEREMMEEGYGHAAEAVEMIVAGEIDA AMNEYNRKVKPKEG >gi|224461045|gb|GG657759.1| GENE 779 811150 - 811551 356 133 aa, chain + ## HITS:1 COG:no KEGG:Closa_1014 NR:ns ## KEGG: Closa_1014 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 133 12 146 146 110 47.0 2e-23 MKEIIYTAVFAVLAIVLILLLVFMFLPKSKGAGIDEEKYVPGVYTSTVTLNNTALEVEVS VDESHINSVRFSNLDETVTTMFPLIQPAIEDIAEQVYDKQSLDDIQYSEDNPYTSQLIVN AIDEALKKAAVTK >gi|224461045|gb|GG657759.1| GENE 780 811585 - 811848 356 87 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1570 NR:ns ## KEGG: EUBREC_1570 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 87 6 92 92 88 63.0 1e-16 MYEYDEDCLRVFLEKQSQLFDEPVAITPEEAEAFLEDCMAVVVNGIDEVREFFEEEGLDI DGMSAEELEEASEVFALPGGRYLIVEG >gi|224461045|gb|GG657759.1| GENE 781 811886 - 812533 742 215 aa, chain - ## HITS:1 COG:TP0554 KEGG:ns NR:ns ## COG: TP0554 COG0546 # Protein_GI_number: 15639543 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Treponema pallidum # 2 215 6 220 222 175 42.0 5e-44 MKACIFDLDGTLTDTLESLTYSVRATLREMGLAEITADECRQFVGNGARRLMECALAAAG DKDAGRIDEGMEIYGRIFDANCTYHVTPYEGIPQMISGLRKKGIQLAVLSNKPHEQTVKV VREIFGEDIFDCVLGQKEGIKRKPDPEGVYNVLDILHTEKDECLYVGDSEVDVKTALNAK IACVGVAWGFRSREVLAEAGAEHIIDLPEELLQYV >gi|224461045|gb|GG657759.1| GENE 782 812694 - 813473 1031 259 aa, chain - ## HITS:1 COG:CAC1696 KEGG:ns NR:ns ## COG: CAC1696 COG1191 # Protein_GI_number: 15894973 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Clostridium acetobutylicum # 1 257 1 257 257 320 62.0 2e-87 MAQGKVEICGVNTAKLPILKEEEKEALFARIKAGDEEAKEEYIKGNLRLVLSVIKRFGGS NENPDDLFQIGCIGLIKAINNFNTELDVKFSTYAVPMIIGEIRRYMRDNNSIRVSRSLRD TAYKAIYAKENYVKRNLKEPTVQEIAEEIGISKEDIVFALDAIQVPMSLQEPVYNDGGDA LYVMDQISDTKNKEEKWVEDLSLEAAMEHLGERERYIIKLRFFEGKTQMEVAEEINISQA QVSRLEKNALRVMKQYLEN >gi|224461045|gb|GG657759.1| GENE 783 813661 - 815271 1823 536 aa, chain - ## HITS:1 COG:PA3614 KEGG:ns NR:ns ## COG: PA3614 COG1236 # Protein_GI_number: 15598810 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted exonuclease of the beta-lactamase fold involved in RNA processing # Organism: Pseudomonas aeruginosa # 3 465 4 467 467 357 40.0 3e-98 MKLTFIGADHEVTGSCHLIEACGKNILVDCGMEQGPDLYDNQEIPVTPADIDYVLLTHAH IDHSGKIPMLCKQGFKGDIISTFATADLCNIMLRDSAHIQEFEAEWRNRKAKRSGAEPYE PLYKMEHAEAAIKLLSPCDYNERITLCEGIDVRFTDVGHLLGSAAIEIWITENDAQKKIV FSGDIGNLNQPIIKDPQTIKEADYVVIESTYGNRTHGVETPDYVGEFTRILRETFEKGGN LVVPSFAVGRTQELLYFIREIKERNLLPEYPNFEVYVDSPLAIEATNVFNKNVWSCFDED ALALVNKGVNPLVFRGLKTTITSDESRMINFDDRPKVILSASGMCEAGRIRHHLKHNLWR KECTVCFVGYQAVGTLGRKLIEGAESVKLFGEPVEVNARIEVLKGISGHADMNGLLAWMK GFETVPSQVFVVHGDDQVTDEFARTITDTFGCPALAPYSGGCVDLSTGEVLTIGVREPKK AAEKPARVRAEAAFNRLVAAAKRLLEVVYKNEGLANKELAKFETQIQNLAEKWDRD >gi|224461045|gb|GG657759.1| GENE 784 815322 - 816062 789 246 aa, chain - ## HITS:1 COG:BH2556 KEGG:ns NR:ns ## COG: BH2556 COG1191 # Protein_GI_number: 15615119 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 29 244 23 235 237 275 67.0 8e-74 MVIKVAVPHQFKLKVIPDFRTLLFPDKKDIHYIGGSEILPAPLEAEEESAVINDLGSEYD EKAKKVLIEHNLRLVVYIAKKFDNTGVGVEDLISIGTIGLIKAINTFNPEKNIKLATYAS RCIENEILMYLRRNNKTKMEVSIDEPLNVDWDGNELLLSDILGTEEDTIYKDLENEVEQK LLLKAISRLSGRERTIIQMRFGLGTPDGEEKTQKEVADMLGISQSYISRLEKKIMQRLRR EMVKYS >gi|224461045|gb|GG657759.1| GENE 785 816075 - 816809 642 244 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2470 NR:ns ## KEGG: Cphy_2470 # Name: not_defined # Def: peptidase U4 sporulation factor SpoIIGA # Organism: C.phytofermentans # Pathway: not_defined # 1 244 17 281 293 96 28.0 8e-19 MDFILLQITRRILRCSATHGRVCLGAAAGALLTCAVVMIPIPYAFIKFILFHGLVNIVML KAGLKISWDRTFVKAYVVLYISGILVGGVFEYLRQYMKVGSLFFALAVVSYFAVLGIWNF LSYLSRLREYRCEAVLYKDEKVLRVEAVIDTGNSLKDAVTGKPVSIVDESVVKTLTDAGL PEGIRYIPYHSVGKEAGVMPVITLDKMCVCQKSEKWIDRPLIGICEGQVASDGAYRMILN PDIL >gi|224461045|gb|GG657759.1| GENE 786 817233 - 818468 1216 411 aa, chain - ## HITS:1 COG:CAC1693 KEGG:ns NR:ns ## COG: CAC1693 COG0206 # Protein_GI_number: 15894970 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Clostridium acetobutylicum # 13 355 12 357 373 335 59.0 1e-91 MLEIKTNESEAAAKIIVVGVGGGGNNAVNRMIDEQIAGVEFIAINTDKQALQLCKAPTLM QIGDKITKGLGAGAKPEVGEKAAEESSEEISAALKGADMVFVTCGMGGGTGTGATPVVAR IAKEQGALTVGVVTKPFRFESKTRMNNALSGIEKLKESVDTLIVIPNDKLLEVVDRRTTM PEALKKADEVLQQGIQGITDLINVPSLINLDFADVQTVMTDKGIAHIGIGQGRGDDKALE AVKQAVASPLLETTIAGASHVIINVSGDITLMDASDAAEYVQDLAGEDANIIFGAMYDDS RADEATITVIATGLHNVGGSASKLKARLENQRPGAVPQQGAQAYERPAAASGAQKPSSQK LDLGMAPTRGGGTTTAPRKPAGGTTPSLDTPRTPTSKVKEQSIKIPDFFKR >gi|224461045|gb|GG657759.1| GENE 787 818625 - 819401 1024 258 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2248 NR:ns ## KEGG: EUBREC_2248 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 27 253 16 248 248 144 35.0 5e-33 MGRNEYQEEEAARPKKKKKKSHKVYAFMVLVMGIAIIALAVLILFYVQKIEVEGNEYCKD KEIINTVQNDRFSINSLYILGKYALGRGGQLPCLDSMKVSMKTPWIVKVKVKEKPIVGYI YAGNEYAYFDKEGMIVYKGADFIEGLPCIEGIETGDISLYGTIESKDKSIFEEMLVTSQQ VKKYKIAPDKIVCKDDRIYLYKGTIRISLGNSVSSEQIAQIPPILEKLEGKEGTLHLENY SEGNTTITFNAEEIQEEN >gi|224461045|gb|GG657759.1| GENE 788 819437 - 820519 1303 360 aa, chain - ## HITS:1 COG:BS_spoVE KEGG:ns NR:ns ## COG: BS_spoVE COG0772 # Protein_GI_number: 16078585 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus subtilis # 4 356 3 361 366 217 40.0 3e-56 MTRSKKKKYDYTMLAALLLLVLIGLVILYSTSAYNGDVKFHDSFYYLKKQAFATVLGVAG MFFVANMDYHVWKHVAVLGYFTALLLSVAVIFVGDEYNGSKRWLSLGPFSFQPSEFAKVA VILFLAHIITKNVKSMGKMRTMIKVMVLILPIVGLVGASNLSTAIIILGIGVILVFVASP KYSQFILMGALGVGFMTIFLALESYRLERLAIWRNPEAFEKGYQTLQGLYAIGSGGLFGR GLGESVQKLGFVPEAQNDMIFSIVCEELGLFGAGFILILFLILIWRFFVIATHAKDLFGA LIAAGAMGHMMIQVILNIAVVTNTIPNTGITLPFISYGGTSVVFLLLEMGLVLSVSSLIE >gi|224461045|gb|GG657759.1| GENE 789 820534 - 821883 1447 449 aa, chain - ## HITS:1 COG:SA1026 KEGG:ns NR:ns ## COG: SA1026 COG0771 # Protein_GI_number: 15926766 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Staphylococcus aureus N315 # 5 444 9 440 449 292 38.0 1e-78 MEVTNKKVLVFGSGLSGTGAVGLLTEHGADVVLYDGNENLDKAELAGRIGGSAVQIVLGT FPEELLQTLDLVVLSPGVPTDLPIVRQMFERGIEVIGEVELAYAFGKGDVLAVTGTNGKT TTTSLLGEIMKNYKEEVYVVGNIGNPYTVAAGKMSEHAVAVAEMSSFQLESIVSFRPAVS ALLNITPDHLNRHHTMEAYIEAKKNIARNQTEEDWCILNYEDEVTREFGKNVRAQVLYFS SRRKLERGIYLDDGRIIYRNPEEICICHVDELQLPGTHNHENIMAAAAMAAVYGVPVDKI RESVKAFKGVEHRIEFVTEKNGVVYYNDSKGTNPDAAIKGIQAMNRKTVLIGGGYDKDSS YTEWIESFDGKVRKLILLGATKEKIAKDAESCGFHDYVFADTFEEAVLMSAEIAGPGEAV LLSPACASWDMFPNYETRGDKFKEIVNSL >gi|224461045|gb|GG657759.1| GENE 790 821893 - 822849 1221 318 aa, chain - ## HITS:1 COG:CAC2127 KEGG:ns NR:ns ## COG: CAC2127 COG0472 # Protein_GI_number: 15895396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Clostridium acetobutylicum # 5 318 4 316 317 253 49.0 5e-67 MDYRVFLPVLIAFALSVVMGPVIIPILRRLKMGQTEREDGVKSHLKKAGTPTMGGVIILV SVVVTSVFYLKNYPKIIPILFVTLGFGLIGFLDDYLKVVMKRSDGLYPKQKFALQILVTA VLAFYLVRFTNIPLTMLIPFSGGHYLDIGWLAIPLMFVAVLGTVNGANFTDGLDGLASSV TVLIATFFTVVAIGTKSGIEPITCAVVGALLGFLLFNVYPASVFMGDTGSLALGGFVAST AYMLQMPIFLIIVAFIYMAEILSVMIQVTYFKKTGGKRIFKMAPIHHHFELCGWSETKVV AVFSIITALLCLVALMAM >gi|224461045|gb|GG657759.1| GENE 791 822907 - 824631 2202 574 aa, chain - ## HITS:1 COG:BH2572 KEGG:ns NR:ns ## COG: BH2572 COG0768 # Protein_GI_number: 15615135 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Bacillus halodurans # 1 573 3 567 644 369 38.0 1e-101 MKNKTYNKKKIFVVFICASVIILGLVGRLVYLMVFDAEYYQEKAESLHERERDIKAARGE IVDAGGTVLATNKTVCTISVVHSQLKDPEGVIAALCAELDMDEDTVRKKVEKVSSMERIK TNVEKATGDRIRELELDGVKVDEDFKRYYPYNELASKVLGFTGGDNQGIIGLEVKYEEYL KGINGKILTTTDARGVELEGVAEDRMEPVPGNTLQVSLDYNIQMYAQQMAEKVMEEKQAD KVSILLMNPQNGEIIAMVNVPEFNLNDPFTLNTKEDTGAMSAEEKQDALNQMWRNGCIND TYEPGSTFKIITASACLEEGVVSLNDNFSCPGYRVVEDRKIRCHKVGGHGSETFVQGIQN SCNPVFIDIGLRLGVDKFYEYFNQFGLMGMTGVDLPGEAGTIMHKKSNVGMVELATMAFG QSFQITPMQMATTVSSLVNGGTRVTPHFGVKVLDSKGKEVETFKYKKEKNIVSKETSETM QMLLESVVSEGSGKNAYVEGYHIGGKTATSQTLPRSANKYISSFIGFAPADDPQVLGMCV IYNPQGVYYGGTIAAPVIRDVFENILPYLGIEKE >gi|224461045|gb|GG657759.1| GENE 792 824702 - 826540 2169 612 aa, chain - ## HITS:1 COG:CAC2130 KEGG:ns NR:ns ## COG: CAC2130 COG0768 # Protein_GI_number: 15895399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 17 612 12 596 729 317 34.0 3e-86 MGKQTRNVFKRKFSKLMQKKLVMLFVAIVLAFGVLVGRITYINAASGDRYTKVVLDQQQY DSRTIPFRRGDIVDRNGTKIATSERVYNVILDVKVVTSKDDYVEPTIEVLKDCFGIEEED VRKLIKDNPGSRYNILKKGIDYEKAKEFEKIDTDEKKYPDVKGIWLEEDYVRKYPYKTLA SDVVGFTVDGNVGSNGIEASYNSILNGTDGREYGYFDDEASVERTVKEAEDGSTVVSTID LQVQSIVEKHILEFNEKHKNEASEGEGSKNTAVIVMNPQNGEIIAEASYPNFDLNSPRDL TNYYSEESIDAMTDEEKLDKLNALWNNFCVSDTYEPGSTFKPFTISAGLETGILTGNESY TCGGMLHVGDHDIHCSNRDGHGTQTLKQSLENSCNVALMQIGAALGNEEFCKYQELFGFG TPTGIDLPGEETGLLYEPKNMDPASLATNAFGQNFNVTMTQMVSAFSSLINGGDYYKPHV VKQIQDENGNVTENKDPVLVKRTVSKETSELIKDYMLGVVQEGTGSSAAVEGYDIGGKTG TAEKQPRGNGKYLVSFIGYAPQDNPEVVVYVVVDEPNVASQASSSYATEMASKIMAEIFP YLGVTKAAAEAE >gi|224461045|gb|GG657759.1| GENE 793 826556 - 827092 451 178 aa, chain - ## HITS:1 COG:no KEGG:Closa_2465 NR:ns ## KEGG: Closa_2465 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 168 3 159 160 105 37.0 7e-22 MAAGYTSSRSRKSYGTSNRTRSQMYVYGNVVTKPAYEPERRTKEPERTGKTSRQVRKNRR KALHMSPGYVIFLAVAAILALIVCVNYVQIQSRLTSRSKAITAMQEELADMKEENNTKYN AVMDSVNLDEIRDKAQNELGMVYASSEQIVEYDNPASDYVKQYENIPEDGILAQSDKK >gi|224461045|gb|GG657759.1| GENE 794 827112 - 828047 564 311 aa, chain - ## HITS:1 COG:CAC2132 KEGG:ns NR:ns ## COG: CAC2132 COG0275 # Protein_GI_number: 15895401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Clostridium acetobutylicum # 1 310 1 309 312 350 55.0 3e-96 MGFEHKSVLLDETINGLNIRPDGTYVDGTLGGGGHAYEICRHLGNKGSIVGIDQDAAAIT AAGARLKDFGEKVTIVRSNYCDMKSQLHKLGIDRVDGIVLDLGVSSYQLDTAERGFSYRE DAPLDMRMDTRQKMTARDIVNDYSEMDLYRVIRDYGEDKFAKNIAKHIAAARRERSIETT GQLTEIIRQAIPMKYQKKSGHPSKRTFQAIRIELNRELEVLRDSLDEMIDLLKPGGRLCI ITFHSLEDRIVKSAFKKNENPCTCPSDFPVCVCGKESKGSILTRKPILPGEEELEYNSRA KSAKLRIFERR >gi|224461045|gb|GG657759.1| GENE 795 828059 - 828499 316 146 aa, chain - ## HITS:1 COG:lin2148 KEGG:ns NR:ns ## COG: lin2148 COG2001 # Protein_GI_number: 16801214 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 146 1 143 143 152 54.0 2e-37 MLKGEYSHNIDPKGRLIIPAKFRDDLGENFVITKGMENCLYVYPEDEWNAFEDKLNALPT TTDKKARAFAYFFQGSATDGDLDKQGRTLIPSVLRTYAHLEKEVVFIGMGKRAEIWDKAR WDEKNAEVELNIEDIASDMEESGFSI >gi|224461045|gb|GG657759.1| GENE 796 828796 - 829053 368 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568667|ref|ZP_03777692.1| ## NR: gi|225568667|ref|ZP_03777692.1| hypothetical protein CLOHYLEM_04745 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04745 [Clostridium hylemonae DSM 15053] # 1 85 1 85 85 133 100.0 5e-30 MSQEKVDRYKQEKANRKKIMKKEKAANAARKCVVGLAALLLVGWVGYSAYGTYKSNKPKE SVEIDYTALTEFSNNLSEAAGTTEE >gi|224461045|gb|GG657759.1| GENE 797 829113 - 829952 751 279 aa, chain - ## HITS:1 COG:SP0742 KEGG:ns NR:ns ## COG: SP0742 COG1307 # Protein_GI_number: 15900637 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 277 1 276 281 151 34.0 1e-36 MSYKVIVDSCGELTEEMKKSGCFETASLKIEVAGQQIVDDETFDQGEFLKLVAASPECPK SSCPSPERYMEGFHCDADHVYAVTLSSELSGSYNSALLGKNLYCEEYGEKDIYVFNSRSA SVGETLIALKIAECEEKGMSFQDVIDTVEEYIAEQDTYFVLETLETLRKNGRLTGLKAIV ATALNIKPVMGATAEGTICQLGQARGIKKALVKMVDEIARRLKEPGRKILAISHCNCPER ARQVKEMILEKADFRDVIIVDTAGISSMYASDGGVIVVV >gi|224461045|gb|GG657759.1| GENE 798 830055 - 830180 117 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEIKVFLLKFSQSVQSSNLIFLDTPRAIPISIVKNRIDVPP >gi|224461045|gb|GG657759.1| GENE 799 830321 - 831325 1162 334 aa, chain - ## HITS:1 COG:BS_spoVE KEGG:ns NR:ns ## COG: BS_spoVE COG0772 # Protein_GI_number: 16078585 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus subtilis # 35 333 25 316 366 153 36.0 4e-37 MARNQKTRKKKMSKTRYFDYSMLAVLIFLICFGLVMLYSTSSYSALVTYGDSMHYFKRQL IFCVMGLIVIFVVAKFDYHIYIKWAKPLYIVSVFLMLLVKTPLGKEVNGAKRWIQLPFDQ QFQPAEVAKIAIILFIPVLICKMGKEIKTLRGIGKILAWGAFSAACVLFLTDNLSTAIIV MGITCIMVFVVHPKTAPFIALFTAGMGVILIAVQIMGRVLVTSENFRMRRILVWLAPEDH AAEGGYQIMQALYAIGSGGFFGKGLGNSAQKMIIPEVQNDMILSIICEELGVFGAILVLV LFGMLLYRLLFIAQNAPDIYGSLIVTGIFAHLAS >gi|224461045|gb|GG657759.1| GENE 800 831452 - 832336 592 294 aa, chain - ## HITS:1 COG:no KEGG:VCM66_A0418 NR:ns ## KEGG: VCM66_A0418 # Name: not_defined # Def: hypothetical protein # Organism: V.cholerae_M66-2 # Pathway: not_defined # 20 264 20 265 285 100 26.0 1e-19 MDKKLSLFDMSESRAVIVKLLDMIEKGTGWLLAPKGKRRDFEEGLELYKTHIIEDPDIDG LEKAVKISASRNELRKYINQGKIIEHAAREIKEDAKPEHVDQDWLFYFFEYAKNTSDEEL QKIWGRLLAMKVNGSPDVTKRLINTFSVMGADDIEVFCRLCAMTLVSGQEPGEIYPFIYM RNHPSYYNRNGIKRQSLAQLDNLGLIEYDVHEDFVLPKAVPALQYASCKIRLQSGKRVSN GNVRFTGSGRELFRITKAGEKEDFIGHCRRVWDEMGVTCEISEIPQTSNCQKIT >gi|224461045|gb|GG657759.1| GENE 801 832470 - 832631 181 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKENKSSFTTERPIDYTESKDAYDGKISSAASERAAEPLPESERPRKDGPGGE >gi|224461045|gb|GG657759.1| GENE 802 832714 - 833352 470 212 aa, chain - ## HITS:1 COG:CAC0981 KEGG:ns NR:ns ## COG: CAC0981 COG1180 # Protein_GI_number: 15894268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Clostridium acetobutylicum # 2 197 25 221 237 189 44.0 2e-48 MQGCPLRCAYCHNPDTWKFEAGEEFSPQEVAGKIRRYRPYLTNGGVTVTGGEPLMQPEFT AELFRILKEEGFHTALDTSGIGNLQLAERVLAYTDLVLADVKFLTEEEYRRYCRADFREV TAFLDLTKKLGIPLWIRRVLVPGINDTEEHIKKLVDFLTKYPNVEKIELLPFRKLCLEKY DAMGIPFPLADVPEMQECETEKLRDMIPGQYR >gi|224461045|gb|GG657759.1| GENE 803 833420 - 835651 2502 743 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 1 743 1 743 743 991 64.0 0 MFTQWEGFKPGKWQEEINVRDFIQNNYTPYTGNGDFLKPATERTGKLLHKFENLLALERE FGGVLDIDTQTVTSLLNYKPGYLDKENEVIVGLQTDRPLKRGVNPFGGLRMTRDACRAYG YELSQKVEDEFQYRTTHNDGVFRAYNKETKAARHCGLITGLPDAYGRGRIIGDYRRVALY GLDYLLEQKQADKDSLSMEVMDVDHVRQQEELYQQINFLGKLRDMAAMYGFDITRPAADA KEAVQWLYFAYLGAIKEQNGAAMSLGRTSTFLDIYFERDIAKGILTEEGAQEIIDDFVMK LRMARHLRTPDYNELFAGDPMWITESVGGMGEDGRTLVTKNSFRMLHTLYNLKPSAEPNL TVLWSKDLPDNFKKFCTKVSCDTDAIQYENDDLMRPQFGDDYGIACCVSAMRIGKEMQFF GARANLAKLLLMSLNGGKDEKQNIQVGPAHEPYEGEYLDYGKVTELLDTYRPWLVRMYAN TMNVIHYMHDKYAYEKTQMALHDTEVHRFMAFGIAGMSVLADSLSAIKYARVKCIRDEDT GLIKDFEIEGEYPAFGNDDDRVDDIACEQVKLFYEELKKQKLYRDAEPTLSILTITSNVV YGKKTGSTPDGRKAGEPFAPGANPMHGREKNGALASLNSVAKLSYKYCKDGISNTFSIVP QALGKTEEERLDNLTAILDGYFGQMAHHLNVNVLNRDTLLDAYDNPEKYPNLTIRVSGYA VNFNKLTREQQKEVISRTFHEAM >gi|224461045|gb|GG657759.1| GENE 804 835968 - 836570 645 200 aa, chain - ## HITS:1 COG:CAC1338 KEGG:ns NR:ns ## COG: CAC1338 COG3546 # Protein_GI_number: 15894617 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Clostridium acetobutylicum # 1 197 1 196 200 253 60.0 1e-67 MWNYEKRLQHPVKITQTNPKIAQVIISQFGGPDGELAASMRYLSQRYTMPYKEVTGILTD IGTEELAHMEMVCAIVHQLTRNLSPEEIERSGFDKYYVDHTLALWPQAASGAPWTATYFQ SKGDPITDLHEDMAAEQKARTTYDNILRLVKDPEVCEPIRFLREREIVHYQRFGESLRIV QDNLDSKNFYAINPEFDVRQ >gi|224461045|gb|GG657759.1| GENE 805 836574 - 836843 282 89 aa, chain - ## HITS:1 COG:no KEGG:Clole_2722 NR:ns ## KEGG: Clole_2722 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 10 85 8 82 86 72 46.0 7e-12 MTDNKPCRRELLDWINVVSFAVDDVKLFLDTHPCNAEALEFFDEFKKQRVQALKEYAKYY GPLTLDTADTEADRWKWIDEPWPWQEGGC >gi|224461045|gb|GG657759.1| GENE 806 836840 - 837121 241 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568677|ref|ZP_03777702.1| ## NR: gi|225568677|ref|ZP_03777702.1| hypothetical protein CLOHYLEM_04755 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04755 [Clostridium hylemonae DSM 15053] # 24 93 1 70 70 138 100.0 1e-31 MPNYRYNASECGRRNNCSRTAPVMREEGCRTKVQPACCEDRAACDELSGMPIAMAYVPWQ KWRALYEVEKGFHCGTIFEELNKPFRGIGGCSR >gi|224461045|gb|GG657759.1| GENE 807 837658 - 837738 120 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKVPVIILGIAIVAVAALIIYMFLK >gi|224461045|gb|GG657759.1| GENE 808 837869 - 838042 198 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568678|ref|ZP_03777703.1| ## NR: gi|225568678|ref|ZP_03777703.1| hypothetical protein CLOHYLEM_04756 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04756 [Clostridium hylemonae DSM 15053] # 1 56 1 56 56 72 100.0 9e-12 MKCPKCGQPLKPSQKDPDYMLCFNCRKKFRVSGAKQQKEEEEEQRYANIPPKKVRDN >gi|224461045|gb|GG657759.1| GENE 809 838181 - 838372 347 63 aa, chain - ## HITS:1 COG:no KEGG:Trebr_1860 NR:ns ## KEGG: Trebr_1860 # Name: not_defined # Def: Heavy metal transport/detoxification protein # Organism: T.brennaborense # Pathway: not_defined # 1 63 1 63 65 77 60.0 2e-13 MTVIKVADMHCEKCVERISRLLTEEGLDFKVNLEDKTVTVDGCEHCVKTALEALDDLGFS AEV >gi|224461045|gb|GG657759.1| GENE 810 838386 - 838688 405 100 aa, chain - ## HITS:1 COG:BS_yvgZ KEGG:ns NR:ns ## COG: BS_yvgZ COG1937 # Protein_GI_number: 16080405 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 13 100 12 100 101 78 48.0 2e-15 MEENNCCTSRTKHRDAGEYKELVTRLNRVEGQVRGIKKMLEEERYCVDILTQVSAVQAAL NAFSKKLLVNHIHTCVVDDIQDGNVEVVDELCDTIQKLMK >gi|224461045|gb|GG657759.1| GENE 811 838717 - 840990 2595 757 aa, chain - ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 4 756 74 813 818 710 52.0 0 MITKQFNIGGMSCAACSSAVERVTGKLSGVTRSSVNLTTGILTITFDEQALSEEEIIRKV ERAGFQAELHTDKNKEEKKEEEAEMEDEVHRTRTRLIVNIILAVPLLYISMGHMVPFPMP LPAVLDMHHSPLNFALAQLILTTVILFNGRKFFLVGFKSLFKGHPNMDSLVAIGTGSAYL YSLVMTFLIRSDSTAVHHLYYESAAIVVTLVMVGKYMEGRSKNKTKDAIRKLMELAPDTA CVLRNGEQTEVPVEQVRQDELILIRPGDKVPLDGIITEGRTTVDESMLTGESIPAEKEAG SEVIGGSVNYQGAVTVRVTRVGSETTLAKIVKMMEDAQGRKAPISKLADTVAGYFVPAVM CIAFIAAIVWALLGHDAAFVLTIFVSVLVIACPCALGLATPTAIMVGTGLGAGNGILIKS GEALEIAHKADAVVLDKTGTITEGKPAVMQIVSHEETEEQLLRIAASCEQASEHPLGRAI VEEARGRGLGLLKAEEFQSVTGQGIEAVIGSDTYYIGNRKLCESLGISPGPYREAAEEIA AKGQTPMFVIRRMGSPEDGGKEEAVPVGIISVADPVKETSRDAIARMKELGIQVYMLTGD NRLTAEYIGGKVGVDEVVAEVLPQDKANVVEKLQKEGRCVMMVGDGINDAPALVQADVGV AIGSGSDIAIDSGDMVLMKSDLNDVYKAIRLSNATIRNIKQNLFWAFFYNSCGIPLAAGA LYAINGTLLNPVFAGLAMSLSSVTVVGNALRLRRLRL >gi|224461045|gb|GG657759.1| GENE 812 841151 - 842389 1339 412 aa, chain - ## HITS:1 COG:alr4806 KEGG:ns NR:ns ## COG: alr4806 COG0112 # Protein_GI_number: 17232298 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Nostoc sp. PCC 7120 # 5 410 7 415 427 528 62.0 1e-150 MYTFDEIKKADSEIAEAIRSEMERQNSHIELIASENWVSKAVMAAMGSPLTNKYAEGYPG KRYYGGCQCVDVVEDLARERAKKLFGCDYVNVQPHSGAQANLAVYFAMVDPGDKVLGMNL DHGGHLTHGSPVNFSGKYFDIVSYGVNDDGVIDYDEVREIALRERPKLIIAGASAYARII DFKKFREIADEAGAYLMVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTLRGPRGGMILS NREAEEKFHFDKAIFPGTQGGPLEHVIAGKAVCFKEALKPEFKVYQQQIIDNAQALCKGL MDRGVKIVSGGTDNHLMLVDLSTEEVTGKELERRLDEAHITCNKNTIPNDPRSPFVTSGV RLGTPAVTTRGMKEADMDVIAEAIALVIKSEDNIGKAKELVAGLTEKYPLCS >gi|224461045|gb|GG657759.1| GENE 813 842448 - 843710 1467 420 aa, chain - ## HITS:1 COG:BS_yyxA KEGG:ns NR:ns ## COG: BS_yyxA COG0265 # Protein_GI_number: 16081088 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Bacillus subtilis # 87 420 69 397 400 170 37.0 6e-42 MDNQYNYYNPEQENMNGPAGGFDGKPTRVKKTAPKWVKLVCSALVFGLVASAAFQTSNVV GDKVFGTGGKKTAKQTSTVGSTKLNTTTNSTVNSDIADIADKAMPSVVSITNMSVQQVQN FFGGVQEQESKSVGSGIIVGQNDDELLIVTNNHVVEGSNTLTVSFIDEESVEANVKGTDA AKDLAVIAVPLDSIKSSTMDAIAVATLGDSTKLKVGEPAIAIGNALGYGQSVTTGIISAT NRELDTYDGELIQTDAAINPGNSGGALLNANGEVIGINSIKVATDTVEGMGYAIPISDAS SIIQNLMNKETRTKVAEGEQGYLGIEGVDVNTESAQMYNMPTGVYISKVVNGGGAEKAGL AKGSIITGLDGTTVNSMDTLKEQLQYYKAGEKVTLTVQTPDKSGEYKESSVEVTLGTSTQ >gi|224461045|gb|GG657759.1| GENE 814 843901 - 845058 1434 385 aa, chain - ## HITS:1 COG:CAC0906 KEGG:ns NR:ns ## COG: CAC0906 COG2872 # Protein_GI_number: 15894193 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain # Organism: Clostridium acetobutylicum # 1 382 1 385 387 167 29.0 3e-41 MTRKLFYEDSHMREFEAEVLACEPFGEQYKIVLDETAFFPEGGGQYADTGWIGGVRVTDA HEKEGVIFHTAGGPLVPGTKVKGTIDWDERFEKMQQHSGEHIVSGLIHQKFGYDNVGFHL GSDYCTLDFNGPITREELCGIETMANEAVFRNLDIQVSYPSKEELEHIDYRSKIEIEGQV RIVTVPGYDVCACCAPHMDKTGEIGLIKLTDMVNYKGGERISMLCGFRALRDYRQKECNV KAISALLCAREEETAEAVGHLKEEQVRQKGKIASLQQKMLTYKAAEISTDGAVAAVFDPE LSGNGPRELMNLLLDRGARVCAVLAGTDEEGYRYVIGSRTEDVRQLCRELNDRFSGKGGG KPEMVQGSLVGKASEIRRFLEEAQP >gi|224461045|gb|GG657759.1| GENE 815 845074 - 846840 1961 588 aa, chain - ## HITS:1 COG:CC3359 KEGG:ns NR:ns ## COG: CC3359 COG0018 # Protein_GI_number: 16127589 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Caulobacter vibrioides # 20 588 20 600 600 455 42.0 1e-127 MEKIIDLIEKEMEEAFEKAGYDRAYAKVTLSNRPDLCEYQCNGAMAGAKTYRKAPAVIAS EVTANLAKSACIKEAEAVNPGFINIRLKESFVADYLNGMNEDHALGLSRAEEPKMIIVDY GGPNVAKPLHVGHLRSAIIGESLKRIARAMGHEVLGDIHLGDWGYQMGLIITELKSRRPE LPYFDDSFDGEYPEDAPFTISELEEIYPTASGRAKEDEAYREQALNATYLLQNGHRGYTA IWNHIMNVSVADLKKNYENLDVCFDLWKGEADAQKYIPDMLRRLKEEGYAHMDDGALVID VQEETDTKEVPPCMIQKSDGASLYGTTDLATLVQREEDYHPDEIIYVVDKRQELHFVQIF RAAKKAGIVPEETKLRFLGFGTMNGKDGKPFKTREGGVMRLENLIAEIEEEMYKKISDNR TVSEENAARTAKTVGMSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSI LNKYEENGGTLSGIKMQGVCSESEKALMLEAARYSEVIQTAFEELAPHKICAYIYDLANV FNRFYHETKILAQEDENRKSSCIALLVLTKRVLEACIDLLGFEAPERM >gi|224461045|gb|GG657759.1| GENE 816 847028 - 847675 661 215 aa, chain + ## HITS:1 COG:AF0830 KEGG:ns NR:ns ## COG: AF0830 COG1853 # Protein_GI_number: 11498436 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Archaeoglobus fulgidus # 1 164 1 166 169 127 37.0 1e-29 MNKNVFRNLSYGVYIISTLDGERGTGCVANSIMQITSEPATIALSMNHDNFTNSCIAASG KFAVSILSETSASSLIGQFGFQCGKDVDKFDGVGFTVKEGLPVIDDSCGYIVCNVIDTME TSTHTVFLGEVIDGDILGDAPAMTYAYYHNVVKGKSPKNAPTYLPEDKEESGDGGKWVCS VCGYVYDGPTPFEELPDSYKCPVCGQGKDKFCRQE >gi|224461045|gb|GG657759.1| GENE 817 847702 - 848622 907 306 aa, chain + ## HITS:1 COG:lin1487 KEGG:ns NR:ns ## COG: lin1487 COG0648 # Protein_GI_number: 16800555 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Listeria innocua # 1 298 1 296 297 386 62.0 1e-107 MIKIGSHVSMSGKDMLLGSAKEAASYGADTFMVFTGAPQNTKRKDISELNIDPAWDYMDS HNISDIIIHAPYIINLGNTVNERTYELAVEFLRMDLMRSAACRSRTLVLHPGAHVGEGAD KGIAQIVKGLNEILTPETPVNIALETMAGKGSEIGRTFEELARIYDGVVCSDKLRVCFDT CHTHDSGYDIVHDFDGVMDHFDKVIGKDQIAVFHINDSRNPQGAGKDRHTNIGSGEIGFD ALSYIVHHPDFLHVPKILETPYIPSLENPKKTYPPYRHELAMLRAGRFDPHLEENVRNDY EHERVQ >gi|224461045|gb|GG657759.1| GENE 818 848792 - 849160 346 122 aa, chain + ## HITS:1 COG:SP1714 KEGG:ns NR:ns ## COG: SP1714 COG1725 # Protein_GI_number: 15901548 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 120 1 120 121 121 46.0 3e-28 MPWDLDNGRPIYLQLMEKIQQDIISGIYKPGDKLPSVRDLALDAAVNPNTMQKALSELER SGLVYSQRTSGRFITEDERMLKQMKTELASEHIRDFFEKMKQLGFQEDETLLLIQDALKG EH >gi|224461045|gb|GG657759.1| GENE 819 849162 - 849863 244 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 223 1 231 305 98 26 1e-18 MNPILECHSLSKRYGNNFYALNNLNLSVERGQIVGLLGPNGSGKTTFIKLINDILVPTSG KILIDGKEPGVETKKIVSYLPDRIHLDDSMKIKDMIAYYTDFYSDFVTDRAYRMLTDLEI DVNKRLKTFSKGTKEKVQLVLAMSRDAQLYVLDEPIGGVDPAARDYILQTILSNYNENAT VVISTHLIHDIENILDRVIFIRQGQLVLNATVDEIRTDHGKSVDALFREVFRC >gi|224461045|gb|GG657759.1| GENE 820 849857 - 850681 796 274 aa, chain + ## HITS:1 COG:no KEGG:ELI_0472 NR:ns ## KEGG: ELI_0472 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 274 1 268 268 90 28.0 5e-17 MLGKLIKYDLKALNRFLVIIHAFLILSALAGRFFLTSRIQFTEVSDTTSLMMMLCFTLYF LIVAGVVFGTEMIIAVKFYKNLFSNEGYLSRTLPVTPGQHLLAKTIAGTVWCIIDVVLIF LSLWIVIMTPSVTSAYNANKAEVLDQLGITGDITPAFLIGSLVLIVLIGAVSSVVMIYAS IAMGQLFSNHRILGAVVSYFIITTVLSIFSLLVMTVTGFFSRYMPAASQNGTLDFNFAEY MIYLCKVTVGLSIVTSILLYIFTYYILRKKTNLQ >gi|224461045|gb|GG657759.1| GENE 821 850771 - 851103 456 110 aa, chain - ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 1 110 1 110 110 91 48.0 3e-19 MPISVTMSFLIILAVAGTTFATRVVPFLLFPKGKEIPRVVQYLGKVLTPAVIGMLVVYCL RTTPVLAEPHGVPEALAVIVTAGLHVWKRNNLLSIGAGTILYMFLIQAVF >gi|224461045|gb|GG657759.1| GENE 822 851094 - 851801 754 235 aa, chain - ## HITS:1 COG:BS_azlC KEGG:ns NR:ns ## COG: BS_azlC COG1296 # Protein_GI_number: 16079724 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus subtilis # 7 230 28 251 254 213 44.0 2e-55 MSGYRKAFKKAFPYTIPVMTGYIFIGIAFGVMYAEKGYSFLWAVLMSLLVYAGSGQYLAV NFFVPGISFLQVIFMTLMVNVRHIFYGISLLEKFNNMGKKRWYMIFGLTDETYSLLCTTK VPDGVEEEKFLFAISLMDQSYWIIGSAIGGLAGSLLPFNSEGIDFAMTALFVVIFVEQWM DRRNRTPAVVGIAAAFICLQIFGADKFVLPSMLLIVLVLFMMRTRLERREEVQCP >gi|224461045|gb|GG657759.1| GENE 823 851876 - 852520 747 214 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568695|ref|ZP_03777720.1| ## NR: gi|225568695|ref|ZP_03777720.1| hypothetical protein CLOHYLEM_04773 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04773 [Clostridium hylemonae DSM 15053] # 1 214 1 214 214 362 100.0 8e-99 MKARWKDCSGRLKKYRRANIIIAVMLLVLALGVVGFNLTEEKVQKAQKTSSQDIKAENKG YDSIETNPLRLEEYPEVTDVVKSYYARLAENSDFVESYDNVQVYTKSGKYKDSYVAFVKY DMKIKDIYTGVPGLGTLYVEKNKESGKYHVSQSVEDKELKNSVREVAGQDDVKKLLDETS AQYQSAVESDALLREALADLKNAYEDSTGTSSNE >gi|224461045|gb|GG657759.1| GENE 824 852714 - 853181 527 155 aa, chain - ## HITS:1 COG:no KEGG:ELI_3991 NR:ns ## KEGG: ELI_3991 # Name: not_defined # Def: predicted membrane protein # Organism: E.limosum # Pathway: not_defined # 1 149 233 421 445 109 29.0 4e-23 MSRRYGTGASIIAQQLSERIGIPVYDKVNVEQELYKNIYESEVEVIRELAEKPCIILGRC ASEILKDRKNVFNIYVCADKEDRIKRIMEKDSITYEEAKEKVERTDEERALYYHEHTGKA WGDVNNYHMILNTSDLGVENCADILMRYFEKMEYI >gi|224461045|gb|GG657759.1| GENE 825 853283 - 853885 749 200 aa, chain - ## HITS:1 COG:no KEGG:TDE2415 NR:ns ## KEGG: TDE2415 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 8 193 16 201 210 198 47.0 1e-49 MGQDTVRLYTRQNDKTLLPLKRQGRIINQRIYVEMHFGDIAPLFLESYDWFTKEAARRVP KPGDVKAPIWCSISAENCLKPIDGTVVYVLEVPKEKVIYFDEAKWDYVLNRIYLPKDEQD AASYREHLKLLGISNGFEFFEGRYKGMYPEEERRIVESWKRVFEIDNWTIFNVCGNIWEI MEAYVQKIVYPGEDLEGLKY >gi|224461045|gb|GG657759.1| GENE 826 853949 - 854824 922 291 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01204 NR:ns ## KEGG: EUBELI_01204 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 284 1 291 298 190 35.0 5e-47 MNYDQFVQDVKRKVSGECGAGTAVCIHTAVKNNGRERKGIMLTRQGVNISPAIYLEEYYE QFLNGGTLEEIAADIVRLYNEVRFSHSWEKDELRSYESVKEKIVYRLINKEKNKTMLTDA PFEPYLDMAAVFYVLLELNAYGTAAMMVRKEHLKGWNVSREDIYRQACRNTKRLLPCEFK TMKEVIAELDGSREMPGRDVMYVLSNTLRSFGAAVVMYDGVLGRVGDHLKENYYVLPSSI HEMIIIPESEAPGKSELANMVAEINATQVEEEDVLSDNAYYYDRKLKKLQE >gi|224461045|gb|GG657759.1| GENE 827 855105 - 855662 684 185 aa, chain - ## HITS:1 COG:BH2799 KEGG:ns NR:ns ## COG: BH2799 COG0231 # Protein_GI_number: 15615362 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Bacillus halodurans # 1 184 1 184 185 213 57.0 2e-55 MVSAGDFKNGLTVEIEGNIFQILEFQHVKPGKGAAFVRTKMKNIINGGVVEKTFRPTEKF EQAHIDRKEMQYLYSDSDLFYFMDVETYDQIAVNADTVGESLKFVKENENVKVISYQGNV FSIEPPITVELDIIETEPGFKGDTAQGATKPAIVETGAQVMVPLFVEQGDKLKIDTRTGE YLSRV >gi|224461045|gb|GG657759.1| GENE 828 855757 - 856257 583 166 aa, chain - ## HITS:1 COG:SA1426 KEGG:ns NR:ns ## COG: SA1426 COG2179 # Protein_GI_number: 15927178 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HAD superfamily # Organism: Staphylococcus aureus N315 # 5 162 8 167 175 113 38.0 1e-25 MFDKFYPDRYVTSAYVIDFEKMYSEGVRGLIFDIDNTLVPHGAPADERAEELFARLKKIG FGCCLISNNQEPRVKMFNRNIQVDYIYNAHKPSAKNYRKAMEIMGTGPENTVFIGDQLFT DVWGAKRAGIPNILVKPIHPKEEIQIVLKRRLEKIVLHFYKKSLNR >gi|224461045|gb|GG657759.1| GENE 829 856257 - 857042 919 261 aa, chain - ## HITS:1 COG:FN0822 KEGG:ns NR:ns ## COG: FN0822 COG0703 # Protein_GI_number: 19704157 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Fusobacterium nucleatum # 92 240 4 153 172 105 40.0 7e-23 MNDLEMYREQLALCDDKLIDALVERNAVVEKIMAYKETYGMPILQPQQEAKQKQRLEEKL TDNKYKDEIYDVFRCILKNSKRIQARKLFDYNIVLIGFMGAGKTTVSDYLSTMFAMDIVE MDQVIADREEMSIPDIFATYGEEYFRNLETNLLIEMQSRKNTVISCGGGAALRERNVAEM KKNGRVVLLTASPETIYERVKDSDDRPVLNGRKNVEGISELMEQRREKYEAAADIVINTD NKNVLQICEELVQRVTEMEDK >gi|224461045|gb|GG657759.1| GENE 830 857130 - 858020 1120 296 aa, chain - ## HITS:1 COG:lin2335 KEGG:ns NR:ns ## COG: lin2335 COG0583 # Protein_GI_number: 16801398 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 291 1 290 292 271 42.0 1e-72 MNLNQLHYFVTLAHMEHYTNAAQKLSITQPSLSHAISSLEEELGTSLFERQGRNVALTKY GRLFMEYAEEALDILDAGIKKTRAMTSERSGKVDIGYIYTQGSEFIPEVISGFLEANRDK KVEFGFSNGVTKEIVEGVKEEKYDIGFCSMVTGEKELDFVPVSQEKLIAAVPPEHPLAEK KSVRFEEIASYPQIFFNRGSGLRGVISQIFKDYGIKPDIVYTVDEDSAMVGLVARGFGVG IVPDAATVRSMKASFLEIEDLDYRRFIYMVTLKNKYQVPVAKAFTEYVKDYYSLKK >gi|224461045|gb|GG657759.1| GENE 831 858181 - 860181 1872 666 aa, chain + ## HITS:1 COG:lin0492_1 KEGG:ns NR:ns ## COG: lin0492_1 COG1902 # Protein_GI_number: 16799567 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 4 364 3 364 364 466 60.0 1e-131 MKNNFKHLFSPLTVRGMTMKNRVVMMPMGSNFAGHDGELSDEHITYYELRAKGGTGLIIV ENICVKYPEGSNGTTQLRIDKDCYIPRLYKLTETCHRHGACMGIQLNHAGASAMSSRTGM QPVSSSVLPSKPGGELPRPLSKEELEGIAADYGAAARRAVNAGFDLVEIHAGHSYLISQF LSPTMNDRTDEFGGCAENRARFCKMVIGEVRAAVGPRVPISLRLSVDELVEGGNTLEDCL AYLEYLNDEADIFDTSAALNPSIQYQIDANYLADGWRSYMARAVREKFHKPSIAIGNIRS PQAAEDILEKGDADLIGIGRGLIADPDWCAKAARGDVCDIRKCISCNIGCVGNRIGGNRP LRCTINPDIIGGEAYKKRNISKPCRVVVVGAGTAGLEAACTAAETGCTVTLLEKQDHIGG LSVEISKIPDKKRLADFPDYLKHRAAGLDNLTIRTGVDATAHTVKSLRPDLVVNATGSVP LLPPITGLHESLADKKADVYSILDLIQNIDRYPEDMSGRKVIVIGGGAVGLDVVEFFAPR GADTTIIEMMPFIGNGLDASSTSSMKECMEKHSVTQLVNTALKKVTPHSFLVEKDGQEEE LPFDYGFVCLGMKAHAPIWDELTKAFEGEDTALLNIGDSVRARRIIDGTDAGRHMVLNTL EQLGYL >gi|224461045|gb|GG657759.1| GENE 832 860287 - 862038 1897 583 aa, chain - ## HITS:1 COG:CAC2362 KEGG:ns NR:ns ## COG: CAC2362 COG0441 # Protein_GI_number: 15895629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 6 579 53 626 637 813 65.0 0 MKVSMKDGSVQDLTFADEVGQEAFRHTTSHILAQAVKRLYPDTKLAIGPAVKDGYYYDFE FSFPFTTEHLAEVEKEMRRIVKESLPLERSVVSREEALKLMEERGESYKVEMIQALPKEE EISLYRQGEFVDFCAGPHVSNTSVIKAFKLQSVAGAYWHGDENNQMLTRIYGTSFPKADE LDAYLKRMEEARLRDHRKLGKELGLFAIMDEGPGFPFFLPKGMVLKNLLIDYWRQLHLRE GYVEISTPIILSRHLWENSGHWDHYKDNMYTTVIDEEDYAVKPMNCPGGMLVYKVEPRSY KDLPMRVGELGLVHRHEKSGQLHGLMRVRCFTQDDAHIFMTEDQIRDEIKGVARLIDEVY SKFGFKYHVELSTRPENSMGSDADWEMATEGLRGALEELGMDYVVNEGDGAFYGPKIDFH LEDSIGRTWQCGTIQLDFQMPQRFELEYTGADGEKHRPIMIHRVAFGSIERFIGILIEHY AGKFPTWLAPVQVKILPVSDKFADYAQKVTDELKAAGIRVELDGRSEKLGYKIREAQMQK VPYMIIVGEKEVAENVVSVRKRDEGDIGSMELKTFTEKVLEDK >gi|224461045|gb|GG657759.1| GENE 833 862428 - 863096 782 222 aa, chain - ## HITS:1 COG:lin2374 KEGG:ns NR:ns ## COG: lin2374 COG5632 # Protein_GI_number: 16801437 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Listeria innocua # 62 221 4 177 316 106 36.0 3e-23 MDRRIAEARRRRRIQRNIRLGVLVLAVLIVLVGIVRIIKPAWFTNDYIELKGKDIDASRP DLDVELLTENPYSRPGTKTDKIKGIVVHYTANPGATAMENRNYFEGLKDSHETKASSNFI VGLDGEIVQCVPTWEVAYASNSRNNDTVSIECCHPDETGKFNEETYKSMVRLTAWLCKKF DLDSKDVIRHYDVTEKNCPKYFVENEDAWNQFRADVQEAIKK >gi|224461045|gb|GG657759.1| GENE 834 863179 - 864207 427 342 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 3 339 7 341 345 169 32 7e-40 MVRDFGTTEAGEQASVYELRNKNGMTVCISDYGAAVVSVRIPCRDGQVRDVVLGYDCARD YEAGGQSFGGTVGRVANRIGGARFTLNGKTYTLAENDNGNNLHSGPDTYNHRLWEVREAD ERHVALHLSSPDKDQGYPGALDVTVTYSLNGENALEIRYEAAAEADTIVNLTNHSYFNLN GHDSGDILEQELWLDAEAYTRADEESIPTGEIVSVEGTPMDFRVRKTIGRDIGADYEALD FAGGYDHNWVLGGDGFRRTGEFSCRESGIRMQIFTDLPGMQVYSGNFLDRERGKAGAVYG KHQGICFETQYFPDAVNKDNFESPVVRAGGQFESVTSYKFEF >gi|224461045|gb|GG657759.1| GENE 835 864247 - 867291 2338 1014 aa, chain - ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 6 1008 5 1013 1014 1076 53.0 0 MNERKADCSWLADPEVFAVGRAPAHSDHLYYESAEEAECRGRMPLRQSLNGTWRFACAPN PSMRQAEFYGEDFDVSGFDLIQVPGHIQTQGYDRNQYINTMYPWDGEEELRPPEVSERYN PVGSYVRCFELDERLREKPVCLSFQGVETAFYVWVNGKFAGYSEDSFTPADFEITEYLKA GENRLAVEVYKRSSASWLEDQDFFRFSGIFRDVYLYALPKSHVQDLYVRAGLEADYETGS LEADVTVVGDTDIEAELVLKDDRGREIARAVQPGARDIHFSVSPGKVRCWSAEEPYLYDV YVYLKDRTGEVIEAVPQKAGFRRFEMKNGIMCINGRRIVFRGINRHEFNAKRGRAVTRED MLWDIRFMKRHNINAVRTSHYPNDSYWYELCDEYGIYLIDEANLESHGSWQKLGTCDPSW NVPGDRPEWSAAVVDRARSMFERDKNHPSILIWSCGNESYAGTGIEAMAAFFRSRDETRL VHYEGVFWNRKYDHISDMESRMYAKPEEIEQYLEKKTGKPYISCEYMHAMGNSLGGLKLY TDLEEKYEAYQGGFIWDYIDQSLLMVNEQGEEVFAYGGDHDDRATDYEFCANGIVYADRS ISPKAQEVKALYSDIKLELGKDSLTVKNRSLFRSAEEYIFLLKIFQEDRELLCKELEIKT APLTAETVTLPEPVMRRAEESGEECVVQVSMHLLNDTKWAQAGYELCSAQYIHEGKKCAG KQVYPLEIIHGDVNIGVRGEGFSAMFSKAEGGLASLCYDGAEYITRAPRTTFWRACTDND RGAKHGYDCSQWMAAGLFQKVKDVNVEEAEGEVTVTFAFIIPTVPASENYVSYTASGDGR IQVRVRYEGAPGLPVLPAFGLEMKLKERCHNVRYYGFGPEENYIDRMEGARLGVYTYTAS GNLSGYLIPQECGNRAGTRWVEVTDDSGAGLRISGDRRPFEHSVLPYSAYELEAASHREE LPRPHYTWLRVLAAQMGVGGDDSWGAPVHGPYLIPSDRPLEVSFTIEKKNGTTK >gi|224461045|gb|GG657759.1| GENE 836 867419 - 868873 1705 484 aa, chain - ## HITS:1 COG:CAC2701_3 KEGG:ns NR:ns ## COG: CAC2701_3 COG0516 # Protein_GI_number: 15895958 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Clostridium acetobutylicum # 205 484 1 280 280 381 67.0 1e-105 MGKIIGEGITFDDVLLVPGYSEVIPNQVDLSTYLTKNIKLNIPMMSAGMDTVTEHRMAIA MARQGGIGIVHKNMPIEQQAEEVDKVKRSENGVITDPFYLSPEHTLADANDLMSKFRISG VPITEGKKLVGIITNRDLKFEEDFSKKIKESMTSEGLITAPEGITLDEAKKILAKARKEK LPIVDKDFNLKGLITIKDIEKQIKYPLSAKDEQGRLLCGAAVGITANCIDRVQELVNAKV DVIVMDSAHGHSANVLKTVDMVKTKFPQLQVIAGNVATGEGAEALIKAGVDAVKVGIGPG SICTTRIVAGIGVPQITAVMNSYEVADKYGIPIIADGGIKYSGDMTKAIAAGANVCMMGS IFAGCDESPGTFELFQGRKYKVYRGMGSIAAMENGSKDRYFQTDAKKLVPEGVEGRVAYK GTVEDTVFQLMGGLRSGMGYCGTATVEELKTKAQFVKISAASLKESHPHDIHITKEAPNY SVDE >gi|224461045|gb|GG657759.1| GENE 837 868983 - 869471 699 162 aa, chain - ## HITS:1 COG:no KEGG:Closa_1008 NR:ns ## KEGG: Closa_1008 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 162 1 167 169 108 33.0 7e-23 MSDYYTEQLVKKRTDMKDVFFKALLAALTIVSVLIVFMFPFGIILPVGMVVLDVFMFRRM NVEYEYLFVNGDLDIDKIMNKAKRKRVFSAHVNDLELLAPVKELELRQHADAKTFDFSSR NEGARLYALVVIDRGQKKKVIFEPNDTIIEGFKMLAPRKVVQ >gi|224461045|gb|GG657759.1| GENE 838 869585 - 871210 1571 541 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 541 3 543 547 609 58 1e-172 MAKEIKYGAEARAALESGVNQLADTVRVTLGPKGRNVVLDKSFGAPLITNDGVTIAKEIE LEDAFENMGAQLIKEVASKTNDVAGDGTTTATVLAQAMVHEGIKNLAAGANPIILRKGMK KATDTAVEAIAGMSSKIKDKEQIAKVAAISAGDQEVGEMVADAMEKVSNDGVITIEESKT MKTELDLVEGMQFDRGYISAYMATDMDKMEANLEDPYILITDKKISNIQEILPLLEQVVQ SGARLLLIAEDIEGEALTTLIVNKLRGTFNVAAVKAPGYGDRRKEMLQDIAILTGGQVIS EELGLDLKETTLDQLGRAKSVKVQKENTVIVDGMGDKDKIADRVSQIKKQIEETTSDFDR EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALAATRAAVEEGIIAGGGSAYIHA AKEVEALAQKLTGDEKTGANVVLKALEAPLFHIAANAGLEGSVIINKVNESKTGTGFDVL AEEYVDMVENGILDPAKVTRSALQNATSVASTLLTTESVVANIKEDVPAMPAGGAGGMGM M >gi|224461045|gb|GG657759.1| GENE 839 871259 - 871543 424 94 aa, chain - ## HITS:1 COG:CAC2704 KEGG:ns NR:ns ## COG: CAC2704 COG0234 # Protein_GI_number: 15895961 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Clostridium acetobutylicum # 1 94 1 94 95 89 69.0 2e-18 MKLVPLGDRVVLKQLVAEETTKSGIVLPGQSKEKPQQAEVVAVGPGGVVDGKEVQMNVEE GQQVIYSKYAGTSVEVDEEEYIIVKQDDILAILK >gi|224461045|gb|GG657759.1| GENE 840 871655 - 871960 352 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568713|ref|ZP_03777738.1| ## NR: gi|225568713|ref|ZP_03777738.1| hypothetical protein CLOHYLEM_04792 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04792 [Clostridium hylemonae DSM 15053] # 1 101 1 101 101 197 100.0 2e-49 MYEGRPVDIQMERMILDEGFFDETVYQCEIITYKPEEERIYLLSKQTELPVFSLDGIYKC TIAGEEGLIECSGSMTERYWNKLGRVMVFRLRNGFYKKVLN >gi|224461045|gb|GG657759.1| GENE 841 872020 - 872802 1055 260 aa, chain - ## HITS:1 COG:CAC1786 KEGG:ns NR:ns ## COG: CAC1786 COG4465 # Protein_GI_number: 15895062 # Func_class: K Transcription # Function: Pleiotropic transcriptional repressor # Organism: Clostridium acetobutylicum # 5 255 4 258 258 218 52.0 1e-56 MSVQLLDKTRKINKLLHNNNSSKVVFNDICEVLTEILESNVLVVSKKGKILGGSRADGVP VIKELIEQEVGKHIDEMLNERLLSILSTKENVNLQTLGFSEDAVRGYQAIITPIDIAGER LGTLFIYKNDEMYEIDDIILSEYGTTVVGLEMLRSVNEESAEETRKEHIVQSAISTLSYS ELEAIIHIFEELDGTEGILVASKIADRVGITRSVIVNALRKFESAGVIESRSSGMKGTYI KVVNDYVFTELERIKAERMK >gi|224461045|gb|GG657759.1| GENE 842 872870 - 874948 1990 692 aa, chain - ## HITS:1 COG:CAC1785_1 KEGG:ns NR:ns ## COG: CAC1785_1 COG0550 # Protein_GI_number: 15895061 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 578 1 577 578 602 56.0 1e-172 MARNLVIVESPAKVKTIKKFLGSNYAVTASNGHVRDLPKSQLGVDPENDYEPKYITIRGK GEILANLRKEVKKADKIYLATDPDREGEAISWHLKQALKLENKKVYRISFNEITKSAVKA SLKNAREIDMDLVDAQQARRVLDRVVGYKISPLLWAKVKRGLSAGRVQSVALRIIADREE EINAFIPEEYWSLDANLKVDGEKKLLTAKFYGTKSKKMTIGSKEELDKILSEVEEADYSV EDIKKSGRVKKAPVPFTTSTLQQEASKALNFATQKTMRIAQQLYEGIDIKGNGTVGLITY LRTDSTRISEEADASARAYIGEHYGTEYVAANDTKGKDDKKIQDAHEAIRPSDVTRTPAA MKESLTRDQFRLYQLVWKRFVASRMQPAKYETTSVKIAAGDYRFTVAASKVVFEGFRSVY TEADEEKETGNVLLKGLDMNSKLTRESFDTKQHFTQPPAHYTEAGLVKTLEELGIGRPST YAPTISTIIARRYVAKENKNLYITELGEVVNNMMKQSFPSIVDVNFTANMESLLDGVAEG KVKWKTIIENFYPDLEAAVKLAEEELEKVKIEDEVTDVICDLCGRNMVIKYGPHGRFLAC PGFPDCRNTKPYLEKIGVPCPVCGKDVVIRKTKKGRKYYGCEDNPDCEFMSWQKPSTKKC PRCGSYMVEKGNKLLCGSEKCGYVENKENNKK >gi|224461045|gb|GG657759.1| GENE 843 874991 - 876079 1036 362 aa, chain - ## HITS:1 COG:TM0250 KEGG:ns NR:ns ## COG: TM0250 COG0758 # Protein_GI_number: 15643022 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Thermotoga maritima # 63 349 49 326 337 209 39.0 1e-53 MELAYEYWLACIRHVPARKKIMLRSEYTDASQIYYIEETRLHFTEYLDAGEAEAVISSRR SWDVRKNYEKLCEKNIQIVPYFQEEYPERLRVTADPPYALFVKGRLPDCRRPAAAVVGAR RCSAYGEAQTGAFAARLAEAGVELISGMALGVDGAGQRAALNAGGMTYAVLGCGVDVCYP REHIGLYMDIQKHGGILSEYPPGTPPLRAYFPARNRIISALADTVLVMEARERSGSLITA DFALEQGKDIYALPGPVTSPLSRGCNHLIRQGAGILSTPDELLADMGIHVCSPGQKSDKN EKMLESPENMVYSCLGLCPKSVSQLVKETGLPAGELLERLVTLELQGYIREISKNYYVRI NG >gi|224461045|gb|GG657759.1| GENE 844 876084 - 877622 1352 512 aa, chain - ## HITS:1 COG:alr4088 KEGG:ns NR:ns ## COG: alr4088 COG0606 # Protein_GI_number: 17231580 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Nostoc sp. PCC 7120 # 3 507 2 507 509 436 45.0 1e-122 MSFSTVLSAAIEGLTVEFVHVEADISNGLPMFHMVGYLSSEVKEASERVRTAVRNSGIEL PPKKTVINLSPASVKKKGAAFDLPIAAAILASLGLVPENGLAHTLIIGELSLDGRLREVA GILPIVMEAKKAGCHTCILPKANAAEGALVEGIKIIGAAWLREVCDYLCGTQSIEPERHH ISRGPLPAVNSQTPDYSDIRGQEAVKRAVEVAVAGGHNILLVGPPGSGKSMIARRLPTIL PPVTLDESLEITKVYSIMGLLDKEHPLAARRPFRSVHHTVTRSALIGGGIIPSPGEISLA HGGVLFLDELTEFQKPVLEVLRQPLEEKKIRITRKHGSYVFPADFILAAALNPCPCGNYP DLERCSCTPGQIQQYLAKISQPFLDRMDICVEVPRVEYESLNEEKDGECSEVIRERVSKA RERQKERYKGLETTVNAALPVKELKRHCRLDSEGERVMEQAFETLGLTARTCHKTIRVAR TIADLEGAGQIGTAHLKEAIGYRMMNKKYWGR >gi|224461045|gb|GG657759.1| GENE 845 877792 - 878409 548 205 aa, chain - ## HITS:1 COG:CAC1689 KEGG:ns NR:ns ## COG: CAC1689 COG1191 # Protein_GI_number: 15894966 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Clostridium acetobutylicum # 3 201 26 224 234 210 58.0 1e-54 MKSFPQPLTASEERYYMQKYTEGDLEAKHVLIERNLRLVAHIVKKYQSLEEDNEDLLSIG TIGLIKAVVTFNPDKCVRLGTYAARCIENEILMYLRSKKKSSKEVSLYEPIGTDREGNEI QLFDIIETDEDDAHRKVALKDDIRLLYEKVEGELSQRERLVLKMRYGLYNEEEYTQREIA RRLGISRSYVSRIEKSAIEKLREYF >gi|224461045|gb|GG657759.1| GENE 846 878536 - 879804 1178 422 aa, chain + ## HITS:1 COG:BS_ycbA KEGG:ns NR:ns ## COG: BS_ycbA COG0642 # Protein_GI_number: 16077313 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 51 418 19 383 387 101 26.0 2e-21 MKKTFGNIIFFSLVITLAAQLNINLFITDFKLSVAVICFPAFLFIAQSFPVLPVTVLGAA GVFASRLLLVWFQSGRLAGAVRSYFPEVIFYLCYGLAFYLYTRRSGGRLPGRNKALLPLF LIDYGANLVELLFRIRLGAFTPKAQASILLAAAVRTAVVWCVLTVFAHYKLLLLKQEHEE RYKRLVLLISKLNGEVVWMKKNTALIEDTMSTSYRLYEKLKSADENGALSKAALKVAKDI HEVKKEYLLIMRGISEALNEELEGGGMYVDELLNLLKDTLTLSAEEQEKTLIIETDCRDR IYTNQHYALMSIFRNLLTNALEAAIKDEVHIYVGEKSEKDTFIFTVTDDGPGIPEEDQTE IFKTGFSTKINFSTGEVNRGLGLSLVRDLAEDQFGGTLTLSSVPGNTTFTLRIPAEKMKV VI >gi|224461045|gb|GG657759.1| GENE 847 879805 - 880662 874 285 aa, chain + ## HITS:1 COG:BS_ycbB_1 KEGG:ns NR:ns ## COG: BS_ycbB_1 COG0784 # Protein_GI_number: 16077314 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Bacillus subtilis # 1 132 1 132 136 90 36.0 3e-18 MKFYLIDDDRNILNILKLIITNRKLGTVCGTSLSGSDALEDVQTLAPDIIIVDLLMTDMD GISFVRKAGSLLPRTAFIMLSQVSSKDMIASAYEAGVEYYIQKPVNSVEVENVISKVSRQ LSMQRTIRKMQHIFMDEMPAASPEPEREAPAAIASRTVLTNILQRLGISGDTGSRDIITA VEYLLEHDGQINDMTLSELCGRFSDSPKSMEQRIRRTANTGMVNLAHLGIEDYGNEIFTE YSNTLYNFEQVRREMDYIRGKSDRHGNVKIKNFLNALVVYSQNRQ >gi|224461045|gb|GG657759.1| GENE 848 880858 - 881907 1186 349 aa, chain + ## HITS:1 COG:SPy0146 KEGG:ns NR:ns ## COG: SPy0146 COG1299 # Protein_GI_number: 15674356 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Streptococcus pyogenes M1 GAS # 4 326 3 325 339 231 44.0 1e-60 MFTIVSGIGLLLVTLAGFSLFSLKMPKGQLAMSGMANAAIATFLIEAVHKYITGDLLGIA FFHSLGETAGGLGGVAAAAMVPICMGANPVLAIVAGVAVGGYGILPGFIAGYIVGLLAPV IEEKLPEGLNIIGGALLIAPLARIIVITVNPAVNATLAAIGGTISAATEQSPVVMGFLLG GIIKMICTSPLSSMALTAMLGLDGLAMGIAAIACVGGSFTNGLIFSRLKLGDRSNVMAVM LEPLTQADIITSNPLPIYCSNFFGGGFAGISAAVFHIVNNAPGTASPIPGLLAPFAFNPA SHVIGALLFAILGGCVAGIAGSRVFRQKIKVPAVPANDERGQTPVATGV >gi|224461045|gb|GG657759.1| GENE 849 881991 - 883142 1506 383 aa, chain - ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 1 383 8 390 390 493 57.0 1e-139 MEVIKELPEVFEEFAEQRKNSFLGVKELKDKGVPIVGAYCTYFPQEIAMAMGAATVGLCS TSDETIPEAEKDLPKNLCPLIKSSYGFAKTDKCPFFYFSDVVVGETTCDGKKKMYEYMKE FKDVFLMELPNTQGEEALKLWKSEIIRFREYLEQKFDVEITEEMIREAVKVNNAGRRSLK KLYEVMRNDPAPIKGQDLFKVLYGSTFKFDRAAIPDEVDALVDKIKREYAQGRMEEKKPR ILVTGCPIGGASEKVIRAIEDNGGIVVTYENCTGAKSIDKLVDEDNPDIYDALARRYLNI GCSVMTPNPNRLELLGRLIDEYKVDGVVEMVLQACHTYNVETLGIRRFVNEKKNIPYISV ETDYSQADIGQLNTRIAAFIEML >gi|224461045|gb|GG657759.1| GENE 850 883292 - 884530 1223 412 aa, chain - ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 5 383 4 381 406 451 55.0 1e-126 MARHPELLIPASSLEVLKTAVIFGADAVYIGGEAFGLRAKAKNFSMDDMREGIRFAHERG VKVYVTANILAHNDDLPGVREYFKELKEIGPDALIIADPAVFEIAGEICPEIERHISTQA NNTNYGTYLFWWKQGAKRVVSARELSLAEIKEIREKIPDGMEIESFVHGAMCISYSGRCL LSNYFTGRDANRGACTHPCRWKYSIVEETRPGEYMPVYENERGTYIFNSKDLCMIGHIPE LIDAGIDSLKIEGRMKTALYVATVARTYRRALDDYARSPELYRKNMPWYLDQISNCTYRQ FTTGFYFGKPADESQIYDSNTYVKEYTYLGIISGEQDGMYRIEQRNKFSVGETVEIMKPN GDNVEAVVRRLADEEGNEQDSAPHPKQVLYVDLGCRAELYDILRRAEPDVQE >gi|224461045|gb|GG657759.1| GENE 851 884514 - 885182 709 222 aa, chain - ## HITS:1 COG:CAC1686 KEGG:ns NR:ns ## COG: CAC1686 COG4122 # Protein_GI_number: 15894963 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 10 213 12 212 216 158 41.0 6e-39 MIVDERMVTYIRSLETPETPLLEEIEQEAADTFVPVIRKETQSFLKTVLAMHRPSSILEV GTAVGFSALLMSEYTPEDCHITTIENYKKRIPIARHNFSRAGRDSRITLIEGDALEVMRG LPGPYDFIFMDAAKGQYIHYMPEVLRLLADGGVLMSDNVLQDGDIIESRFAVERRNRTIH SRMREYLYELKHREDLLTSILPLGDGVALSIKRGEKKDGQTS >gi|224461045|gb|GG657759.1| GENE 852 885272 - 886939 1946 555 aa, chain - ## HITS:1 COG:CAC1683 KEGG:ns NR:ns ## COG: CAC1683 COG0595 # Protein_GI_number: 15894960 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Clostridium acetobutylicum # 1 555 1 555 555 652 58.0 0 MKKENNGKLRIIPLGGLEKIGMNITAFEYEDSIIVVDCGLAFPEDDMLGIDLVIPDVTYL KDNIQKVKGFVITHGHEDHIGALSYVLKEMNLPIYATKLTMGIIEKKFTEHNLLRSTRRK VVKHGQSINLGQFRIEFIKTNHSIQDAAALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQ RFAEIGKKGVLALMSDSTNAERPGFTQSERTVGHTFDHIFAEHQNTRIIIATFASNVDRV QQIINSACKYDRKVVVEGRSMVNIIAVARELGYLNVPDNALIEIDQLRNYPPEKTVLITT GSQGESMAALSRMAADVHKKVTIMPGDTVIFSSNPIPGNEKSVSKVINELSAKGANVIFQ DAHVSGHACQEELKLIYSLVKPKYAIPVHGEYRHLKANAGIAQTLGIPKENIFILQSGEV LELNSKEAKVADKVHTGEILVDGLGVGDVGNIVLRDRQHLAEDGILIVVLSLEKGSNQLL AGPDIVSRGFVYVRESEKLMDEARNVVSNAVEDCLTHQKNADWSKIKLVIRDTMNEYIWK KTKRRPMILPIIMDV >gi|224461045|gb|GG657759.1| GENE 853 886942 - 887421 186 159 aa, chain - ## HITS:1 COG:CAC1682 KEGG:ns NR:ns ## COG: CAC1682 COG0735 # Protein_GI_number: 15894959 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 6 149 10 150 151 126 48.0 2e-29 MSISQEKFKELLKEKGLKVTNQRLLVLEVLADHRDKHMTAEDIYELVKEDYPDIGLATIY RTVQLLLEMQLVDRINLDDGCARYEIGELFLGEAKHHHHHLICKTCGKVLPFKDDLLEEL ESHIEEATGFHVLDHELKFYGQCKECLERQNSTEKHVEV >gi|224461045|gb|GG657759.1| GENE 854 887428 - 887670 321 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568727|ref|ZP_03777752.1| ## NR: gi|225568727|ref|ZP_03777752.1| hypothetical protein CLOHYLEM_04806 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04806 [Clostridium hylemonae DSM 15053] # 1 80 7 86 86 91 100.0 2e-17 MSEEMQEEAEFFVLEQTKVNGVSYILVTDSEEDDAECLILKDTTTDESSDSIYEIVEDDV EIGAVSKVFEELLEDVVIER >gi|224461045|gb|GG657759.1| GENE 855 887707 - 888138 513 143 aa, chain - ## HITS:1 COG:lin1537 KEGG:ns NR:ns ## COG: lin1537 COG0816 # Protein_GI_number: 16800605 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Listeria innocua # 1 137 1 136 138 154 62.0 6e-38 MRIMGLDYGEKTVGVAVSDPLGLTAQGIETIFRKEENKLRQTCARIEELIREYEVERIVL GLPKHMNNDIGDRAEQSLEFGEMLKRRTGLEVVMWDERLTTVEAERTLIENKVRREDRKK YIDKIAAVFILQGYLDSIYVGQE >gi|224461045|gb|GG657759.1| GENE 856 888144 - 888407 302 87 aa, chain - ## HITS:1 COG:CAC1679 KEGG:ns NR:ns ## COG: CAC1679 COG4472 # Protein_GI_number: 15894956 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 6 81 8 83 86 91 57.0 4e-19 MKDLSNTQFFQVESGPQIQAKDILEIVYKALSEKGYNPVNQIVGYIMSGDPTYITSHNGA RSLIMKMERDELVEEMLKTYIEHNGWV >gi|224461045|gb|GG657759.1| GENE 857 888465 - 889748 866 427 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 419 1 423 451 338 42 9e-91 MKKVALHNLGCKVNAYETEAMQELLAQHGYEIVPFEEGADVYIINTCTVTNMADRKSRQM LHRARKMNPSAVIVAAGCYVQARGEDADDCIDIVIGNNRKKDLIRILEEYEDGRWETGEG LLDIDHTDEYEELNVSRTAEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKRESVLAEV RRLAEGGYKEVVLTGIHLSSYGVDTGDDLLRLIEAVHGTDGIERIRLGSLEPRIVTEEFA QALAGLPKICPHFHLSLQSGCNATLKRMNRRYTAEEYFEKCELLRRYFRDPALTTDVIVG FPGETDAEFEESRAFIDRVDFYETHVFKYSKREGTKAAGMEDQVPDEVKTARSSVLLELS RRKQAAYEEKLIGTTVEVLMEETVMRGGELYETGHTKEYVKIGRKGSENLTNKVINVEIE SPLQIIH >gi|224461045|gb|GG657759.1| GENE 858 889946 - 890179 308 77 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1899 NR:ns ## KEGG: EUBREC_1899 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 77 1 77 80 107 76.0 1e-22 MKTVQISLNSIDKVKSFVNEITKFDYDFDLVSGRYVIDAKSIMGIFSLDLSKPIDLNIHA DNDVDTVLDILKPYIVD >gi|224461045|gb|GG657759.1| GENE 859 890250 - 891431 1556 393 aa, chain - ## HITS:1 COG:CAC2971 KEGG:ns NR:ns ## COG: CAC2971 COG0301 # Protein_GI_number: 15896224 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Clostridium acetobutylicum # 6 393 5 382 384 354 49.0 2e-97 MRFHTFLLKYGEIGIKGKNRYLFEDALVRQVRFALRDVDGEFQVYKSQARIYVDCEGDYD FEETVEHLKRVFGIVGICPVVRMEDKGFDELKKDVVAYMDELYPDKKMTFKVEARRARKT YPRTSMEINCDIGEAILEAFPDIRVDVHQPDVMLHIEVRDCIYVYSKIIPGPGGMPVGTN GKAMLLLSGGIDSPVAGYMIAKRGVGIEATYFHAPPYTSERAKQKVVDLARLVSRYSGPV KLHVVNFTDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKKDGCLGLITGESIGQVASQT MQSLAATNDVCTLPVYRPVIGFDKQEIVDIAEKIGTFETSIQPFEDCCTIFVAKHPVTKP NVEVIRRSEEKLSEKIDELVDKALETVEIIEIK >gi|224461045|gb|GG657759.1| GENE 860 891514 - 892674 1034 386 aa, chain - ## HITS:1 COG:CAC2972 KEGG:ns NR:ns ## COG: CAC2972 COG1104 # Protein_GI_number: 15896225 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Clostridium acetobutylicum # 4 382 3 376 379 292 42.0 6e-79 MKEIYLDNSATTRAYESVGDLVRKVMCEDYGNPSSMHTKGVEAEKYIKQAKERLAKLWKV QEKEIFFTSGGTESDNLALIGAARANKRAGKHLITSSIEHPAIINTMRYLEEEEGFRVTF LPVDKYGRIRLDALKAALCSDTILVSVMYVNNEVGSVQPIDEAASIVKAYNRNILFHVDA VQGFGKYRIYPKRMKVDMCSISGHKIHGPKGTGALYIGEQVKIKPVMYGGEQQKNVRSGT ENVPGIAGLGLAAETIYTNLEEKVAAMRYLKAHFIEGVRKIENTTIHGLYDETSAPHIIS VGFSGVRSEVLLHALEEKGIYVSSGSACSSNHPGISGVLKGIGAEQEYLDATLRFSMSEF TTEEEIDYTLDTLYNVVPMLRKYVRQ >gi|224461045|gb|GG657759.1| GENE 861 892718 - 893455 700 245 aa, chain - ## HITS:1 COG:CAC1285 KEGG:ns NR:ns ## COG: CAC1285 COG1385 # Protein_GI_number: 15894567 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 243 1 243 250 180 40.0 2e-45 MQHFFVTPFQVGNGYIFIEGQDVNHMKNVLRMKPGEELTVSDGDNRKFLCAVDRYEEGQA VLKICREEMSDTELASRICLFQGLPKQDKMELIVQKAVELGVSEVVPVMTRRSVVRLDEK KAARKVERWQSIAGSASKQAGRGYIPKVAPVAGFGEALRQASAMDVLLIPYELAEGMQET KRVISSIVPGQSVGVFIGPEGGFEREEVELAVEAGAVPITLGRRILRTETAGLTTLSVLM FHLEG >gi|224461045|gb|GG657759.1| GENE 862 893457 - 894419 967 320 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238917093|ref|YP_002930610.1| ribosomal protein L11 methyltransferase [Eubacterium eligens ATCC 27750] # 1 317 1 318 318 377 55 1e-102 MKWNQFRLKTTTEAEDIVSGMLMDVGIQGVQIEDRVPLTKEDKEQMFVDILPDIPEDDGT AYLTFYLGEEEDAGTILGQVRRGLEDMRSYLDVGECIIEESQTEDVDWVNNWKQYFHQFT IDDILVIPSWEEVEEKDSGRMVIHIDPGTAFGTGMHETTQLCIRQLRKYVGPDTEILDVG CGSGILGMLALKFGARYAVGTDLDPCAIDATHENMEANGISREQYEVMIGNIIDDREVQD KAGYDRYDIVAANILADVLVPLTPVICSHLKPGGIYITSGIIEEKEAVVVEAVKASGLAV LEVTHQGEWVSVTAQKKQEN >gi|224461045|gb|GG657759.1| GENE 863 894430 - 894996 783 188 aa, chain - ## HITS:1 COG:Cj0167c KEGG:ns NR:ns ## COG: Cj0167c COG1971 # Protein_GI_number: 15791554 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 1 185 1 184 187 154 49.0 8e-38 MALYELFIIAVGLSMDAFAVSVCKGLAMKKCTWTKAGVVGLYFGVFQAVMPFVGYLLGVQ FKDVITSVDHWIAFVLLGIIGANMVREARTGCDSCGEEDESLDVRTMLGLAVATSIDALA VGVTFAFLRVSIVPAVSFIGVITFTISVAGVKIGNVFGTKYKSRAELAGGVILILMGCKI LLSHLGLL >gi|224461045|gb|GG657759.1| GENE 864 895349 - 896251 1028 300 aa, chain - ## HITS:1 COG:BMEI0562 KEGG:ns NR:ns ## COG: BMEI0562 COG3757 # Protein_GI_number: 17986845 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Brucella melitensis # 91 294 60 258 277 72 28.0 1e-12 MDGSKAAYRRRCLEGAIVLAAALLLYVCSGADGRMNGGRAASDPSGKDEDKRTYTFVDVE GAVYEADYLEGLPGCSYEYERLKEKEGYKYYTGKDGTVVSRAGIDVSEYQQSVDWAQVRE AGIEFAMIRVGYRGYGSSGKLVEDKLFRAHMDGTLGAGLEVGVYFFSQAVSEEEALEEAR FVLERIREYEITYPVAFDTEEIKDDESRTDGLSREQFTDNCIAFCDSVEEAGYDSLIYAN MKWMAFTLELERLADYDKWYADYESVPQCPYEFSMWQYSESGTVPGVEGSVDLNIDFENN >gi|224461045|gb|GG657759.1| GENE 865 896264 - 898330 2147 688 aa, chain - ## HITS:1 COG:VC1348 KEGG:ns NR:ns ## COG: VC1348 COG3437 # Protein_GI_number: 15641360 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and an HD-GYP domain # Organism: Vibrio cholerae # 7 342 73 417 441 205 36.0 2e-52 MDKRHKILIVDDTEMNRSLLSDMLGDEYEIAEAVNGLEAVQYLQKNENDIAIILLDIVMP VMDGFEVLAMMNKGKWIEHIPVIMISAETSSAYIDQAYDLGATDYISRPFDVKTVRRRVS NTIMLYAKQKMLQGMVTDQILEKEKNNYLMVEILSTIVEFRNGESGLHVMHIRIITEILL KALARRTEEYNLNSAAIALITNASALHDIGKISIAEEILNKPGKLTKEEFEIMKTHSAIG AEMLKSVPNHQNEGLVKVAYEICRWHHERYDGRGYPDGLKGEDIPIAAQVVSLADVYDAL TSVRVYKPAYEHEKAMEMILHGECGAFNPVLLECLIEEGDHISKELKVRSLGGTMNNEMR NITSELLESGGITASDRTLNLLEQERIKYQFFASMSQEIQFEYNAETDMIMLSEWGANYL GTDEIALHPMDNPIIDEIIDHDALCEIRKNLRSATPAHPVVSGTYQLRIQGRERWCKLIA RALWSDEEKCIYSGSIGKMIDIHEERLEMNMLKQAAAQDMLTSLYNHANAQKIISSMLKE DTDRRYGLILFDLDFFKNANDQHGHLFGDRVLKFVAKKILQNIRSEDIAARVGGDEFLIF AEYRDDFSYVVNRIFDSLADYYYNFKISISMGVAIYPKDGTTYEKLFQCADQALYSSKQE GRNQYKFYEKSMEGCLSVISPMDNEIED >gi|224461045|gb|GG657759.1| GENE 866 898402 - 899898 1911 498 aa, chain - ## HITS:1 COG:DR1171 KEGG:ns NR:ns ## COG: DR1171 COG0714 # Protein_GI_number: 15806190 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Deinococcus radiodurans # 18 241 3 215 340 100 26.0 1e-20 MNIKRAKNEIKDSIEAYLKKDEFGTYMIPAVRQRPILLMGPPGIGKTQIMEQIARECKIG LIAYTITHHTRQSAIGLPFIQEKEYGGKKYSVTEYTMSEIIAAVYDKIEQTGMQEGILFI DEINCVSETLAPTMLQFLQCKTFGNQKVPEGWVIVAAGNPPEYNKSVRDFDVVTLDRIKK IEVEENFEVWKEYAYTAEIHPAVLAYLELKKEYFYRIETTVDGKMFATARGWEDLSQLIK AYEVIGKRADREVVYQYIQHWKIAKDFANYLELFEKYKKDYGLLKVLEGQYSRDVLEQLR YAPFDERLSVVGILTGKLGELFRGYVMEDRYVTLLHGYLLRMKDNETLAAVTAAAQEEYE RLRKAEQLDRREEEIYRRMLRALESYGQTVKREHLPQDEVFERVKEEFRKETEAREKAAE KAGSALDSAFDFMEDAFGDSQEMVAFIAELNTNHYSIQYLKEYGCDKYYRYNKRLLTDEQ HEDIMGRLDEVEENMINL >gi|224461045|gb|GG657759.1| GENE 867 899895 - 901208 1067 437 aa, chain - ## HITS:1 COG:no KEGG:Closa_4146 NR:ns ## KEGG: Closa_4146 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 14 433 18 437 439 452 52.0 1e-125 MNDGQTISEQLETVGKQILAAARNELYMKMRFLDVALSSFSFIMDEGIETAGTDGFAIYY EPRWLGGLYREDRTLVSRLYLHMVLHGVFRHMTGRKGRDPRYYDLACDIVTEYILDGMNY RCILRRRSVLRRETYRRLKGQMKVLTAEKVYGVLLYRDLDERELKRLEEEFRIDSHSRWP QENDKKQQQQIQNRWQDISEQMETDMETFSKEASAESGHLIDHVKVENRQRADYRQFLRK FSVLKEEMAVDPDSFDYVFYTYGLELYGNMPLIEPQEWREVQKVEEFVIVIDTSMSCSGE LVKKFLEETYAVLSENDSFFRKVNIHIIQCDDTVQTDEKITDEEGLKRYMDSLTLYGEGG TDFRPAFTYVEQLIKEQVFTRLRGLIYFTDGRGTYPSKMPPFETAFVFFSEDYEDTDVPP WAIKLVLAGEDIEGDSR >gi|224461045|gb|GG657759.1| GENE 868 901232 - 902218 750 328 aa, chain - ## HITS:1 COG:no KEGG:Closa_4147 NR:ns ## KEGG: Closa_4147 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 16 328 4 325 325 159 33.0 2e-37 MTERQTAEQICPEIHYKKDRDRVTITGCYGIDGNLYIPDEIEGHAVYGIGPYAFSDGGEE TDCVYLSPDAAYVGERHRICTDEVEEIRLPGRVGEIGRYAFYRCRNLRKLTLTDSLLDIG GGAFTGCRLKEAEIHFYRGEKSALKSIVDEIRFAIRAILYYHGAHGGVQTARILFPEHYE EAVENTPARLLVTEHHGSGGYYRQCFFNHELDYKKYDELLPFAVTEEKEETVIELVLGRL MYPFRLSEKSGSAYKEYLHGHMEAVGRYVAEREAFDEIRFLSRTGCFGARAVDEAVRRAS ELGHTELVGVLMNERQKLPAGKKKTFEL >gi|224461045|gb|GG657759.1| GENE 869 902304 - 903119 780 271 aa, chain - ## HITS:1 COG:BS_yisY KEGG:ns NR:ns ## COG: BS_yisY COG0596 # Protein_GI_number: 16078154 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Bacillus subtilis # 3 263 4 261 268 223 43.0 2e-58 MFYVKAKDGVKLAVYVYNPECTETVFLVHGWPLSHLMYEYQIPLLVKNNYRVVLMDLRGF GNSDSPACGYDYDTLADDVYRVVRALKLYRFVLTGFSMGGAIVLRYMKNYRSYGVKKLIL LAAAAPCWTRRAGFPYGLTREYVDGLICQAETDRPQLARDFSHDQLFASCQSGAVKDWFE LIALSASGIATIETAYSLRDEDGRKDLDAVRVPTAIIHGTKDTVVSNDLVKIQHKCIADS RLYQLDESGHGIVYDELEKFNCIFIKEVGKL >gi|224461045|gb|GG657759.1| GENE 870 903190 - 903795 374 201 aa, chain - ## HITS:1 COG:CAC0352 KEGG:ns NR:ns ## COG: CAC0352 COG1434 # Protein_GI_number: 15893643 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 32 193 36 194 225 106 30.0 3e-23 MDLYKAKKTAGILGRLTAVFLLLNICIFTAVFRRPKRRWKKHTYDCAVVCGYYAEEDGSP SPFMRTRVEKGAGLLREGKVKALLLSGGAVSNSHVEAEVMRDHALKLGVPADVIYTEPRS VSTYHNMKYSKALMSENGLKDCVVVTNGWHLRKADHYAGKFRMDHVMCRADDPTGQTWRT KIMLYIKTWWNMYRNLFRGYH >gi|224461045|gb|GG657759.1| GENE 871 903782 - 904573 850 263 aa, chain - ## HITS:1 COG:CAC2244 KEGG:ns NR:ns ## COG: CAC2244 COG0561 # Protein_GI_number: 15895512 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 1 263 1 266 266 192 37.0 7e-49 MRQAALFFDIDGTLLSEVTGEIPQSTMDALHAARENGHLTFINTGRTYGSLPPEIVRLKM DGYLCGCGTYLLYKDRVLLENHIPKDRGTEIIDCIKKCNVEGLCEGTEDVYFSNRISRFE QIESMRRYFAGAGLGLERAMEDKNFIYDKLLVYTDSHSDKETFLDFIKGDLEAIDRGQGI YECVQRQFSKATAIQCIMDCIGFEKEQVYVFGDSSNDLSMFQFAEHAVAMGRHDAVLEPY TEHITDKVEEDGISRAMEHYGLI >gi|224461045|gb|GG657759.1| GENE 872 904753 - 905385 513 210 aa, chain + ## HITS:1 COG:L119032 KEGG:ns NR:ns ## COG: L119032 COG0586 # Protein_GI_number: 15672695 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Lactococcus lactis # 1 180 1 180 214 188 53.0 6e-48 MQEFVIQVMNQFGYLGICFLIIVENIFPPIPSEVILFFGGFMTTCTEMTIPGVVLFSTLG STLGAMILYEAGCLLTPSRLEALLNTKALRRLGFEKKDVEKTTGWFEKHGQKAILFGRCV PIIRSLISVPAGMAGIRLPLFLFYTVAGSTVWNIFLVSLGAFMGSSWDTIQSYLQAYASL TRFLLITLAVILCWRCVRKVSRRKTKGQPR >gi|224461045|gb|GG657759.1| GENE 873 905382 - 905975 753 197 aa, chain - ## HITS:1 COG:BH0719 KEGG:ns NR:ns ## COG: BH0719 COG1309 # Protein_GI_number: 15613282 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 3 177 4 175 188 112 31.0 3e-25 MSKNDYRTRVTKMLIREAFTALLKSRPIQSITVKELCGKAGINRGTFYAHYTDIYDLLDK MEDEMTADFRKALEPLLDSGEKELTPLNFTTGVFQCLKDNADICTVTLGPYGDKEFAARL IQIGQENCVETYTRYFEGATPEQIEYFYAFVSAGCIGVLEKWLAEGMAGSAQDIAAMTED IMMSGIGFLKNKGSRHI >gi|224461045|gb|GG657759.1| GENE 874 906158 - 907165 603 335 aa, chain + ## HITS:1 COG:slr1706 KEGG:ns NR:ns ## COG: slr1706 COG0451 # Protein_GI_number: 16329831 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Synechocystis # 1 327 9 337 343 118 28.0 1e-26 MKKIYIITGANGHLGRAVIRLLLGTDAEVRGLILPGDTKQLFENVCYTKGDVRDRESLRP LFLNTDGAETYVIHAAGIVDISWELSAHVYDVNVSGTKNVLSLCAEYKIKRLIYVSSVHA IPEKNSLCVLQEVSRFSPREVRGGYARTKAEASQAVLNSVKKGMDAVIVHPSGMLGPDAV SGSYLMQLVEDYMSGLLPACVNGGYDFVDVRDVAAGCLLALEKGRTGECYILSNRHYEIR EILHIIRDLTGGRRLPVLPAWAARAACPVIRQWARMKNRRPLYTKYSLYTLKSNDRFSHD KATSCLGYTPRDIRSTLKDTVLWIQEQNVSVPPGS >gi|224461045|gb|GG657759.1| GENE 875 907107 - 908477 1128 456 aa, chain - ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 157 422 160 433 452 90 26.0 9e-18 MMNADDIFAALRVAGTCIVFACFIFIPLKSRFRYGNVRTALWVSALIVVTVVTTLLFLLP GHLFTEYNILGIALWFCLAVAVFRITIESSGFELLFIVLVTLNLYVNIMAITKSIVSLHL KEMPEAAAQMLVSYGVTLFYVPLLWILLVRFFRRIVELNISRSFWRVIWMIPALTYIVFY VKIVGDFWKRPVHIEKGDVLFSVLWSFITYAFFFVTLVMLLQAYKGIAAMEETKLIASQL QMQEEKYESMIEHMEDTARLRHDWRHHLLVIAGFADSGSVEGLREYLKQLAPVYMADTDT TLCENHVADVILRHYRTLADDAGIKIRIQADIPEGIHIGETDLGSVLGNLLENALHACRG RQTGEREIEVKAAVKGSQLVIMLRNTYENKIVERKGRYLSTKHEGEGRGIASVKRVVEKY RGMVHVAYDERFFNFTLFMNLEEQKRSAPGSREQYL >gi|224461045|gb|GG657759.1| GENE 876 908493 - 911228 2769 911 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 486 905 327 754 776 173 26.0 2e-42 MGGKGLIMSGDNKQQRKIITIILSVALALLGIFSFISIQKLQGNARVINYAGVVRGGTQK LVKEELQGSPDDKLMERLDKIIEELLTGEGEHGLIRLNDTKFQELMTQMQESFSVLKEEI GRVRQGADKSRLYSLSQEYFELADQTVSAAETYSEKNARIAERGFMVLAVIFIFVAGFFI WFGSVQNKRQKEIQEAEDENRLKREHLDKMAKELQVPINEISELIYVADVENYDLLFVNE AGKKNFQLDDISGIKCYKALQGQDAPCSFCTNALLKPGENYSWETTNQLTNRHYILKDRL IEWDGKKARLEIAFDMTQMENERQKLKYALDVENMVMECIRVLYQGRDIVKAMNQVLKQL GSFLQAERSYIFSIKDGKMYNEFEWCAQGVEPEIDNLQELPVSLIERWRPAFEKQECVVI ENLEEYRESSPKEYETLAAQGISSLVAAPMEKDGVVIGYLGVDNPPGERLLNIGAPLQTL CYFILLTYRRAENEQQLSRLSYHDTLTSFYNRNRFMKDLEALQESKSSVGIIYLDVNGLK EVNDRRGHAEGDRMLVRAADKMKVIFRKEDCYRVGGDEFVIICTDIPKEKFEDKTAELKR IFEGDSRCNAAIGSQWAGEFQNINQIVAKADAMMYEDKKEFYRKSRKGNRYRHHSDEILQ LADPRILKQEIDRKRFEVYLQPKISSADRTPVGAEALIRYRSDDGTMVLPGNFLPLLEEA RSVSQIDFYVFEFVCSQMEAWAKEGKKASPISVNFSHHSLRQPSFTERLKEICRKYAIPP TLIELEITEKAGDVTDTEMRRLIAGLRSEGFGVTLDDFGTDHADLALLSTTEFDVLKLDR SMVKDIAENSKTQEIVRTIVESCKKTGIKLVAEGIEEEEQLLALGDCGVEYVQGYLFSVP IPIREYENEYL >gi|224461045|gb|GG657759.1| GENE 877 911338 - 912471 1129 377 aa, chain - ## HITS:1 COG:BH2292 KEGG:ns NR:ns ## COG: BH2292 COG3858 # Protein_GI_number: 15614855 # Func_class: R General function prediction only # Function: Predicted glycosyl hydrolase # Organism: Bacillus halodurans # 1 377 1 425 426 284 40.0 2e-76 MQIHVVTEGENIDGIAAAYGVEVWQLIYDNQLVYPYRLAVGQALLIQTGARRPGRNIYVN GYAYPFVSRWVLQQTLPFLSELSIFSYGFTAEGALIPPLLDERWMIREAARFGTEAVLTL TPLGPDGRFNNRLISAVVHDESASDLLISNLLQVMREKGYRGLDIDFEYILADDRDAFTG FVQKAAEAVRADGRWLSVALAPKTSEEQRGLLYEGKDYRALGEAADHVLLMTYEWGYTYG PPMAVAPLPQVRAVVEYAVTAIPDWKISLGIPNYGYDWPLPYERGVTRAETIGNVQAVQR AIEKGAVIRFDETSQSPYYNYVEDGTEHEVWFEDVRSLQEKFGLITEYELRGCGYWQIMQ WFRANWLLLRDNFYILK >gi|224461045|gb|GG657759.1| GENE 878 912607 - 913914 1106 435 aa, chain - ## HITS:1 COG:SP1795 KEGG:ns NR:ns ## COG: SP1795 COG1621 # Protein_GI_number: 15901624 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Streptococcus pneumoniae TIGR4 # 7 425 31 428 439 215 32.0 1e-55 MIRDVLHLKAPGNWLNDPNGFIYYKGKYHVFFQQFPYAPVWGTMHWGHAVSEDLIHWEHR KTAVFPTKDYDRDGVFSGSGIEKDGKLYLYYSAVRYEAEEEENIHLAKDGRFVTSQAMLI SDDGEQFDNFAGKKQIIPVSRDSRTADARNTRDPKVWRGKEQFYMILGSTLNDRTGRVLF YKSKDAQKWEYAGQYQNDAYGTVIECPDLFETGGAWVFAGCPMGIMNDGLAYTDQAVCAL ADFREEDCRLKLPETYQFIDYGLDLYAPQTNVDAEGRRVMIAWMRMPEPVVSGEDERGEW IGMMCLPRVVEVSDGHIYFRVHPQVKQHFTSVVSPGDEADFKEPFYVRAVLEEGRGLDIG GYRIWAEDGCIRTDRSRVFRGLEGYRTTCCTPPLKGGCKLDVFVEPNLIEVFVNDGEYVI SNIVYGLDGTMIKEM >gi|224461045|gb|GG657759.1| GENE 879 913933 - 914793 994 286 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 2 286 24 303 304 178 41.0 8e-45 MNKSSIGGTKKRTANILAMAILVIVFIAYMFPFLMVVINSLKEKRDIIKSPFSWLFTIKG LSFDNFEKAFTQMDFLNAFKNSLIVTVSATLLVTLFAAMLAYYIVRHNNAVSKITFALMV ASMIIPFQAIMIPLVSIYGGALNMLNHRLTLIFMHTGFSMAMSVFMFHGFIKGSIPIALE EAAYIDGCTRSQTFFKIVFPLLKPIISTMIILNSLAFWNDFLLPSLVLSDKKLLTLPLST YSFYGTYSADYGTIMAGLLLCVIPIVILYVLLQKQIIGGVVAGAVK >gi|224461045|gb|GG657759.1| GENE 880 914793 - 915665 1085 290 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 8 290 7 281 281 187 40.0 2e-47 MRAKGKGKDFCMFALPGMFCFFAVVIIPFVYGIYLTLTDWNGVAEIKNFVGFKNFQGVVK DEQFWTSLLLTFKYVILVVVLVNVIAFLLAYLLTRGIKGQNFFRAGFFTPNLIGGIVLGY IWQFVFSRVFVNIGESTNWELFGVSWLSDPTKAFIALVVVSVWQLSGYMILIYVAGFMGL SEDVMEAASIDGATGWKKMKSIVMPLMMSSITICLFLTLSRAFMVYDVNLSLTAGAPYGT TEMAAMHVYEKAFTSRQFGVGQAEALILFVIVACISGLQVYLTKKKEVEA >gi|224461045|gb|GG657759.1| GENE 881 915682 - 917058 1739 458 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 63 413 33 389 443 94 26.0 5e-19 MRRRLVKKAVSLSVAAALAALTLTGCRFGFASDPDDPNETEKEEPIDTSVDSFQYDASLN GTNITLLNSKGEIQVALEKMADAFEEKSGVHVEVMPVTEGDSPYTKVVSLYNSGTPPTLS ILDTTDVIALAEEKAADLSGEKWTEEAADYLTEVNGKVYSFPLCIEGRGIIYNKKVIDDA LGETFDPDSVRSLKEFTKLLDRLVDAGVERPVSMAKEDWSLGAHQLQYIYETYDGTSEGA EKAIEDIKDGKLDLESYDRMGQFLDMFDVLKKYNVAKGDPLGADYDEMAIDLVDGKTAFW FNGNWAWPNLADAGAGNEDDYGFLPYFMNNDSDDFVNGKIQASPSKQVMLDGQLATQKQQ AAAREFLNWIVYSEIGQQMLVKTCNVIPPFRNNPYEPSDPLSRDIYEKVHSQETFNASAI VPNDHWAVLGAAMQKYLADRSGRDELTEAVQKYWEDQE >gi|224461045|gb|GG657759.1| GENE 882 917325 - 918395 762 356 aa, chain + ## HITS:1 COG:BH3727 KEGG:ns NR:ns ## COG: BH3727 COG1609 # Protein_GI_number: 15616289 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 19 351 3 322 331 128 27.0 1e-29 MKNKYLKSRDIMAQSKNVTFADIAKYTNFSKTTISRYFNDPNSLTVENQAIISDALEKLN YKENKVARILASGKTEFIGIIVPNLFLHYYSEILNQILSTYETFGYKFLVFVGNENEETE RRYIQELLAYKIEGMIILSHTIPSIELASLQIPIVTIEREDRHVNSVNTDNYMGAIQATS LLARHNCDVLIHINTPTSEDIPAYDRIRGFKDFCEDNHLNHRIIIHEMERTHESASMHLR SILSELEQEYSGLKKGIFISNDTHANILLNLIVRKYGTLPDDFLIIGYDGSPVSKEAVIP ISTVGQQIDKIAFEAVSLLVTQMDERKKRRPAPLREPVHKMITPVLIRRETTEDRD >gi|224461045|gb|GG657759.1| GENE 883 918452 - 919033 535 193 aa, chain - ## HITS:1 COG:no KEGG:Trebr_1792 NR:ns ## KEGG: Trebr_1792 # Name: not_defined # Def: helix-turn-helix domain protein # Organism: T.brennaborense # Pathway: not_defined # 5 191 6 192 195 184 45.0 1e-45 MSYVTGSIIKELRERKGYTQRQLAESVCVSDKTVSKWETGKGLPDVGIITELASALGVSL AELLNGEYAENRNRSGNMKKISFYVCPLCGNVIQAMGNGSYSCCGILLPAMEPEEECAGH EIQVRDMDGEFYVCMEHEMDKTHYLSFLVYATSSHVQFVKLYPEQSAEARFTKRGHGFIY ACCNRHGLYRKNV >gi|224461045|gb|GG657759.1| GENE 884 919148 - 922489 2745 1113 aa, chain - ## HITS:1 COG:RSp1178 KEGG:ns NR:ns ## COG: RSp1178 COG0642 # Protein_GI_number: 17549399 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 692 1111 274 675 676 165 32.0 5e-40 MIQEGDRTFGGHIEEAKKLASALMHMHYCENDTEGVTACFAPQISWLGAGEEEYVSGREA CVERFLNYKGAIPKCNISEEEYDVVCPADGVYIVTGRMWIETDPSAGMYLRVHQRVTYVF QETEDGLKCAHIHCSNPYQEMVGGEKFPDKIGKQSYEYIQEQLSSLEEEVKQRNRQLEVI MSSIAGGLKISNDDDTYSFAFVSREAAALFGYTVEEFMEATGGSAVGNVYPPDLPKALAD CAEAFKDGGLVYSTKYRVRCKDGSLKWVIDSGKKARDADGNWMVNSLYLDITRSEEDAQR LREQTGLLTSIYETVPCGIIRFVRHRDNSFSLISLNRAVIEIMGYADMETGCRDWHDGVM GAVLKEDRKVLYDIYSMLQDVGDRRDCEYRVRRMDGSIRWMDGTSMIVGVTPDGDDILQR TVVDATERKILQQRLDREHEMYRVAMEVSSAVMFEYLMDEDRFISYEPRTGQGVIRNEIR DYSKELLKHEIVHPDDVATVIDNICNGRSEVFEVRCSTPGGRPGEFVWHRVNSRLMTEEG RPDRVVGALNNIHKMKSKLSESSERLRMNQSALQAINDVYVSIFYVDLQKDSYYAVRLPE AGRGNTMARTGCYSEELYGYILQDVVDADRGKVADICERDSILRELAQRNGHLEVEFRNR TSSYWIRMEVHLTAAGGGSGKTAIFAFRNISAEKQRDLEYYEEEKKAKCALEEAYASVNR ANQAKSDFLSRMSHDIRTPMNAIMGMAEIARNSTGDEKRIADCLSKIDLSGRHLLGLINE VLDMSKIESGNMSLSEDVIVLDSFLREVSEIVRPDVEQKSQHYTVTRKEGKHSAVYGDTV RLKQILINLLSNAVKYTQEGGHISVSLEEKLSGERGVGCFEFVVEDDGIGMSKEFIDKLF LPFERAEDSRVSQIQGTGLGMAITLNLVQMMNGTIQVDSRLDEGTKFTVTVYLKFVQAKG VPESGKKEDRSRPVREFAPGMRVLLAEDNMLNREIVVDLLSMNGIAADCAVNGKEAVDTF IARPPGTYALILMDIQMPVMDGYSAARAIRSLSAAGGRPDAADIPIIALTANAFVDDAYR AKQAGMNEHVTKPLEIGRLLDIMHQLTDPPDWI >gi|224461045|gb|GG657759.1| GENE 885 922507 - 924927 2410 806 aa, chain - ## HITS:1 COG:RSp1178 KEGG:ns NR:ns ## COG: RSp1178 COG0642 # Protein_GI_number: 17549399 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 365 783 262 664 676 174 31.0 5e-43 MSADNLAELLDALTDMSVYVIEEETHRLLYFNKRCRETGRGRASLGAKCHDVWPEVCGCC PLQGLGERTSNHIVCPDPLLHTTVDVTATRINWDGNIRAVVVTAAPHRMNREEEQGFREI EHMYAQSLVTVFDECIIANLTADHYVNCQRDMLWSDIPEQGCFGVENRSYAEKTVHPDDL ETFNAHFSREAMLHAFEHGRKRITKRLRRLSPDGSYRMAEFAAARIGREEDCWCVLVFHD VHEEFLMEQQLNVEISQLATAAKAAYQMLIAVNLTQNTYHMLEYERSQVKRPEDTGCFDD LIKFELDTVHPDYRSEFIGKFRRSALIDTYLGGERIVSMEVPHLGADGVYHWNFTQVVRV ESPHTDDLIEITLSRNIDEERRIQEETIEKERRTKQILEEALEKAERTGQAKSDFLSRMS HDIRTPMNAIIGMTELALMNTGNEEKIKEYLKTIAGSGERLLSLVNEVLDVSKIESGTFE LAEKEADLCELVDEVAEMFRVTTEKMHQTFVVHVEKEIHARVLADAGRINQILVNVLANA SKYTEEGGMLSLSLRELKKEENQVGTYQFTVEDNGIGMKPEYVEHIFEPFSRADDSRISK IAGTGLGMTIVRNLVSMMDGDIQVESEYGKGSKFIITLYLTKCDASALTKPAETHCDSEM FAGLRVLLVEDNELNRQIAGEMLKLLGAQVECAENGEQAVNAVCSHPALYYDVVLMDVRM PVMNGYEAAKKIRACGMERIEELPIIALTADAFAEDVRKASLAGMNGHLSKPVSMEQLKK ILSNCTAWRLRNDKASGIGMKTEKRK >gi|224461045|gb|GG657759.1| GENE 886 925018 - 925758 291 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 219 1 221 223 116 32 4e-24 MSRAIEYRDIKKIYGDRAIIEGFSIGIEQGEFVTIIGSSGCGKTTILKMVNGLVEPSGGT VIVNGRDIRNENMIELRRNIGYAIQGSVLFPHMTVEQNISYVPNLLNKKNKKKTKDAVSK WMGIVGLEEELRGRYPQELSGGQQQRVGIARALAASPDILLMDEPFGAVDEITRGQLQTE LKRIHQKTGITILFVTHDISEALNLGTKVLVMDQGKIQQYGTPEELLYSPETEFVGRLVE KERPGR >gi|224461045|gb|GG657759.1| GENE 887 925768 - 927303 2018 511 aa, chain - ## HITS:1 COG:FN2009_2 KEGG:ns NR:ns ## COG: FN2009_2 COG1732 # Protein_GI_number: 19705305 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Fusobacterium nucleatum # 213 510 4 304 307 356 57.0 6e-98 MQNIWNMLAGRREFFAKLLLEHLEISLIAILIAIMFGGLSGILISEYERASRPTLGVIGF LYTIPSISMLGFLIPFSGVGNVTAVIALTVYALLPMVRATHTGITNVDAGILEAAKGMGS TRFQMLYKIKIPLAMPVIMSGIRNMVTMTIALAGIASFIGAGGLGVAIYRGITTNNTAMT MAGSLLIAVLALVVDFILGIAEKSMQRTRGKAKRKNRTVKVTAAVLCLALIVAGALNFHK KDTIQIATKPMTEQYILGEMLSLLIEQDTGLETEVTQGVGGGTSNIQPAMEKGEFDIYPE YTGTGWNMVLKKNGLYTEDLFEDMEKEYKDKYGMQWEGMYGFNNTYGLAVRKETARQYGL KTYSDLQKVADKLTFGAEYDFFEREDGYDALCDAYGFRFGNTMDLDIGLKYQAVNQGKID AVIIFTTDGQLSTSDVTVLEDDLQFYPSYMCGNVVRSEVLKEHPQLQDVFDKVAGILTDA RMAELNNKVEAEGMEPADVAKQFLKESGLLR >gi|224461045|gb|GG657759.1| GENE 888 927307 - 927918 518 203 aa, chain - ## HITS:1 COG:MA0739_1 KEGG:ns NR:ns ## COG: MA0739_1 COG5015 # Protein_GI_number: 20089624 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 4 140 22 155 163 124 47.0 1e-28 MKAQDCLNILREIRDVAFATVDEKGKPQVRIIDIMLVEEGKLFFCTARGKNFYRELTESG ETAVTGMNKSYQMVRLSGKVSRVKEQREKIDRIFEENPAMKDVYPGDSRYILEAFCIEDG ELEFFDLGRSPIFRESFVLGKQGRITKGYRITDQCTGCGVCQNICPQQCIRKGTPCEIAQ EHCLHCGLCYENCPVRAVERREL >gi|224461045|gb|GG657759.1| GENE 889 927915 - 928775 879 286 aa, chain - ## HITS:1 COG:SA0315 KEGG:ns NR:ns ## COG: SA0315 COG0846 # Protein_GI_number: 15926028 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Staphylococcus aureus N315 # 2 273 19 291 315 234 40.0 1e-61 MEHGEKVKQKINEADAVVIGGGSGLSAAAGYTYSGERFQRNFAEFIARYGLKDMYSAGFY PFPTKEEKWAYWSRHICCNRYDQEQNDLYMSIRALVEGRDHFVITTNVDHQFQAAGFDEE RIFATQGDYGLFQCAKACHDKLYDNEEQVREMVKRQRDCRIPSSLIPKCPVCGGDMEVHL RCDGYFVEDSAWHEALNRYEEFIGKNRGNKILFLELGVGMNTPGIIKYPFWQMTADYEQA FYICLNKGQAWAPQEITEKALCIDADIADVVKSLQSAGSSHGEAVL >gi|224461045|gb|GG657759.1| GENE 890 928984 - 929313 280 109 aa, chain + ## HITS:1 COG:FN0589 KEGG:ns NR:ns ## COG: FN0589 COG1733 # Protein_GI_number: 19703924 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 2 102 4 104 107 140 69.0 5e-34 MKDIPECPVEMTLKLIGDKWKVLIIRDLLSGTKRFNELMRSVTGITQKVLTGHLRAMEAD GLLTRKVYPEVPPRVEYTLTDTGYSLKPILEAMTEWGNSYKTSKTGTAH >gi|224461045|gb|GG657759.1| GENE 891 929414 - 930013 434 199 aa, chain - ## HITS:1 COG:CAC3421 KEGG:ns NR:ns ## COG: CAC3421 COG1182 # Protein_GI_number: 15896662 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Clostridium acetobutylicum # 6 199 3 200 200 108 34.0 9e-24 MEVSVRVLFVDCCTKEGGASKTRQLCRIFLDEVKRLHPEYEVETLVLKEKKLVPLEEADI VRRNALIRAGETGDCMFDHARQFADAERIVAAAPYWDLSFPSMLKVYIEHIFVNGIAFAY EGPRAVGRCIAEKFMYIQTAGGFVGENEPGSMYLKAVCKMLGIPEFQYICAEGMDIQEID REQQWRTAVEETVKAAQQW >gi|224461045|gb|GG657759.1| GENE 892 930173 - 930559 365 128 aa, chain + ## HITS:1 COG:CAC3438 KEGG:ns NR:ns ## COG: CAC3438 COG3682 # Protein_GI_number: 15896679 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 122 1 122 124 97 38.0 8e-21 MTALPQISEAEYEVMKIVWKYAPVSTTEITERLTSATDWSPKTVQTLIKRLVNKGALAYE KQSRVFIYTPLVKESEYVNQESSSFLKRFYNGDITAMLSAYIEDDRLSASDIDALRSLLS KNSAKGGD >gi|224461045|gb|GG657759.1| GENE 893 930561 - 932345 959 594 aa, chain + ## HITS:1 COG:SA0039_2 KEGG:ns NR:ns ## COG: SA0039_2 COG2602 # Protein_GI_number: 15925746 # Func_class: V Defense mechanisms # Function: Beta-lactamase class D # Organism: Staphylococcus aureus N315 # 353 594 7 250 252 228 44.0 3e-59 MFPIIRFLICNLFIAILTGIIFAVRYGFKSQLSARRQYQLWFLLLGLLAVPFLPVQLPGS GRAAAWFTNLGSRSPHALSPAAGSPGAAGRTGAAGWISDFSISVSRNAPSFTETLLFFIW LAGMAVMLLLLIRSYFRLRHIKRSSLPLQNRDILALYGRCLHETHIRRNIPVRSTAFLRS PVITGFLKPCIYLPLHLISNCDPADLRYMLLHELQHYRHKDAAVNYLMNIAAVLYWFNPF VWLALKEMRGDRETACDSAVLEMLETKDYEDYGHTLINFAEKISLIPFPFASGMGGNMKQ LKKRILNISSYRPESAWRRMRGICIYCLTALLLLAVVPALSTDAAGEDIYKFDKKGEDIS HPDLSSYFNGYDGTFVLYDTAADAWQIYNEEHAALRVPPDSTYKIYNALLGLETGIISPG QTQMGWDGKNYPFEEWNTDQDLNTAMRDSVNWYFQSLDRQAGPSAIKDYLRQIRYGNEDN SHGTDTYWLESSLKISAIEQVQLLKRLYDYDLPADKANINEVKNALFLRQNGEEKLYGKT GTGRVDGHDVNGWFVGWLERTDRTYFFAVNLKGSSGATGALASDTAQAILADIQ >gi|224461045|gb|GG657759.1| GENE 894 932467 - 933024 552 185 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1856 NR:ns ## KEGG: Cphy_1856 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: C.phytofermentans # Pathway: not_defined # 1 185 1 185 185 242 63.0 5e-63 MNKVATSKEAILAASRTIVMEKGISAVSMRSVADACSVAVGSLYNYFPSKADLLSAAVAD VWRDIFHLSGDCTACDSFSSCLALLFESIREGCAKYPGFFTFHSVTFTAGDKEKGRLMMQ QYFGHIKESLLCVLKNDRMVRPDAFNGSLNAENFVDIIFTLFTSMLLKEQYDYKPVLEIV ARCIY >gi|224461045|gb|GG657759.1| GENE 895 933097 - 933564 355 155 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1855 NR:ns ## KEGG: Cphy_1855 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 2 132 8 138 144 157 69.0 1e-37 MKVKKRTLLLLAGLVWSAAGFNILRIGIVSYSGNISAQNLFVSCVIFALFWFLVFGPLVK KHTLRIRQYKEIMQFFLKFFDGKSFCIMAFMMSVGIGIRVSGICPDLYIAVFYTGLGFAL TLAGLSFTWNYFRGSKNEQTGKEICEHAGNYGNIV >gi|224461045|gb|GG657759.1| GENE 896 933536 - 934216 719 226 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1854 NR:ns ## KEGG: Cphy_1854 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 226 1 226 226 305 72.0 1e-81 MQAIMETSFDAVYLITVITLGIVMIRRSRGIKQYVLFGVMAVTLGAGDAFHLVPRAFALC TTGLEDYTAALGIGKFITSVTMTIFYILLYYVWRLRYRVQGHMALTASVYVLALARIVLC LFPQNGWTSADAPLSWGIWRNVPLALMGLLIIVLFYKAAKTHGDRPFGLMWLTIVLSFAF YIPVVLFADTVPAVGMLMIPKTCAYVWTVLIGYCDMNRHLKGAHIK >gi|224461045|gb|GG657759.1| GENE 897 934213 - 934641 438 142 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1853 NR:ns ## KEGG: Cphy_1853 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 139 1 139 140 138 61.0 6e-32 MKKLWRISFIYFLAGIACGVFYREYTKYMAFSGRTALSFTHVHLIVLGTLLFLILMLFCK DSALADSRKFKLFLISYNIGLPLMAVMLFVRGITQVRGLPLSRGADAAISGIAGISHIVM TAALIVLMLAIKNCFADAEQKD >gi|224461045|gb|GG657759.1| GENE 898 934652 - 935827 1310 391 aa, chain - ## HITS:1 COG:no KEGG:Clole_2897 NR:ns ## KEGG: Clole_2897 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 31 373 46 386 401 172 32.0 2e-41 MKRRRMITVCFLLALVTASCGRTTEEKAAGVQKEDSRTLFEESVEIAEKYRDIYETAEKK ESVGTLETTKQIVKRLGKEGYAVFDYANQINMENPDKVRAFAVRVEEKKTAGVTILAVND RGGFTRYDMKTSKGSVDVEKSSLYWDGNTPVSEYREEYTTGTWIYNEKGYLFFERNRLTG TGGGRIAVRLEPLDDTCRELNRNYLIPVGYAQNNMFTEDWSETEYKELNFYDLYERLYRL KTGEAAPYEFAFTGRTYEVPAAQFEDIFQTYFRIDSRTLRQKTNFNEADGTYRYRPRGLY DKGTTPDVPFPEVTAYEEKADGTVKLTVNAVWPKKSMEKAFSHEVVVRPLEDGTYEYVSN HVIPSDENAAPEWYMDRLTDEQWQEYYESTQ >gi|224461045|gb|GG657759.1| GENE 899 935903 - 938008 2040 701 aa, chain - ## HITS:1 COG:CAC3683 KEGG:ns NR:ns ## COG: CAC3683 COG0768 # Protein_GI_number: 15896915 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 52 698 34 669 671 509 42.0 1e-143 MRYKNKNHKKSTPVLILSVAAGIFLTAAAIYAAVYFYTDSARKDQQELLVTYMKHIPEKE YKEMYAMLDKKTAAKISEEEFVRRNSAIYEGIEISSLKVDVKAYDKKQKKVKYHTSFDTD AGPVSFDNAASFVKEEDGYRLEWKDSLIFPGLEEEDKVKVSVTEAERGQILDRNGRVLAG KGTASSVGVVPGKLKDRDGAVSELAGLLGLEPEVIEKKLNAQWVKEDSFVPLKTVPKVSE LDLLAVDPEDERAQEAGRQEKLLAVPGVMISDVEVREYPLKEAAAHLTGYVQNVTAEDLK KHAGEGYTSNSVIGRSGIEGLYEKELRGTDGCSIEIMNGDGELKKVLASVMVQDGQDIKL TVDAQLQSALYEQFREDKSCSAAMNPYTGEVLALVSTPSYDNNGFITGMSDEEWTALNED EKKPLYNRFRQVWCPGSSFKPVTAAVGLDSGALDPEEDFGNEGLSWQKDSSWGSYYVTTL HEYSPAVLENALIYSDNIYFAKAALKIGAGTLQDFLQKLGFGEEMPFEITMSASQYSNTD KIETEVQLADSGYGQGQILVNPLHLASIYTSFCNEGNIIRPYLLYKEEAQKDIWIQNAFS EDAAARVLEGMKKVVSDPNGTGYAAHRDDVVLAGKTGTAEIKASKEDTSGTELGWFAVLT PEKDSKKPLLLVSMTEDVKDTGGSGYVVSKDKNVLDTYLTE >gi|224461045|gb|GG657759.1| GENE 900 938181 - 939272 933 363 aa, chain + ## HITS:1 COG:mll9509 KEGG:ns NR:ns ## COG: mll9509 COG3706 # Protein_GI_number: 13488377 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Mesorhizobium loti # 184 351 177 345 354 126 40.0 7e-29 MNFLKKFFNELLEDIFVNMTNRLCVQLRLFCIAGAGISVIMTLLNAVKMEYRLGLETGVS AIVCIVIYLYTAKTGRYLAGSLCMAIILLAMFTLYVTGGLVEGFAALWFCLYPFICFFIL QMKPAILFSGIGLSVLILFLWTPLNQILPPVYTQNFLLRFPFLYIGNFVFSLALNGFYVY TYGRLQQLNQKFEYLSNQDGLTKLSNRTYLERYKQKLMDSRNAELHALMLDVDCFKQYND NYGHMAGDEVLKSVAGVINGLTADPDSIAVRYGGEEFLILLQEAGQKEAETFARTLLRKI HDLKIPHITGDGYVSVSIGISRQYVSSEEKFLDLLKQADEALYCAKQSGRNCIITESGAR LSI >gi|224461045|gb|GG657759.1| GENE 901 939359 - 940405 1101 348 aa, chain + ## HITS:1 COG:SP1032 KEGG:ns NR:ns ## COG: SP1032 COG0614 # Protein_GI_number: 15900903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 343 1 336 341 281 44.0 1e-75 MKTKKWISILLGAALSAFVLAGCGGSGAQTPAGESDAKETAGSKGDYPLVISHAFGETVI ESRPENIVTIGWENQDTPLALGVVPTGVSAANYGKVTEHGLHPWTDEAFETLGEKAPVVF DDIDGLDYEAISDAKPDVILAAYSGITEEEYNLLSAIAPVVAYPGTPWQTYWRDQTILNA EGMGMKKEGEAKVAEVDALIKDKTEEYPELAGTKTAFFWISPDDFSTFYVYLPSDPRAAY LTDLGLTFPDSVLKMAGDTEDFSVTLSRENSDVLSDVEMMVVYGDETLLEALQEDALMSR IPAVKNGAVALVDSASSLAGACTPSILSIPAEIDEYLRLLSEAHGKIK >gi|224461045|gb|GG657759.1| GENE 902 940402 - 941394 878 330 aa, chain + ## HITS:1 COG:SMa1745 KEGG:ns NR:ns ## COG: SMa1745 COG0609 # Protein_GI_number: 16263414 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Sinorhizobium meliloti # 11 330 45 366 366 260 52.0 2e-69 MRRLKTILVSLACIFFLLLCILASITCGARSVGFENIAGALSGSDAHEAHVIAARIPRTV FGVLAGAALAVSGALMQAVTRNPIADPSILGVNTGASLFVVCGIAFFHINTGSQYIWLAF TGASATAVFVYGLASFGYGGATPLKLALAGAAAGTALQSLVNTVMLPRTQVMDQFRFWQT GSISGASWSDIRLILPYLAAGFILSLLLAPSLNTLALGDDTAAGLGLHVTRTRALAALAG VLLCAASTALAGPIGFIGLMIPHLMRLLLGPDMRKILPLSAVGGSCLLLLADVAGRILGR PGELESGIVTALAGAPVFILIIRKVKVRSL >gi|224461045|gb|GG657759.1| GENE 903 941391 - 942428 764 345 aa, chain + ## HITS:1 COG:SP1034 KEGG:ns NR:ns ## COG: SP1034 COG0609 # Protein_GI_number: 15900905 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 12 340 7 333 335 225 43.0 8e-59 MKSSDYNTAASGCRRRRKQYISAAAALLLLMFLLAVFMMTYGNTVYTPGTVISVLMGNHI KGASFTLLTLRLPRLLAAILCGAAFGMAGNTFQKLLGNPLASPDIIGVSSGASTAAVFGS LVLGLSGNAVSFLAVAFGLLVSMLLYVLSRNGGFSGGRLILTGIGMQAFLNAAISWMLLR ASEYDVPGALRWLSGSLNGIGMDRIPGLAAAVLTAGTAVLLLSRYLMILELGEAYAITLG VRIGLIRLLLILFSLLLIAFATAVTGPIASVAFLSGPVAARISGSSGSNTAVSALTGSVL VLASDLAGQFALPSRYPAGVITGILGAPYLLFLLLRMNRKGENAL >gi|224461045|gb|GG657759.1| GENE 904 942425 - 943237 178 270 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 256 7 253 318 73 26 5e-11 MNTHLLSADKVTAGYDGRAVLSDVDLTVPEHKISVIIGANGCGKSTLLKTFARLIKPRDG HILLDEKTLSSYPPRRAAQIMGLLPQSPAVPDGIKVADLVARGRFPYRRLLKSMTAEDFR AVEEAMDIMGITSLADRSVDELSGGQRQRVWIALALAQQTDILMLDEPTTFLDISYQVEI LDLLTDLNRRRRTTIIMVLHDINLSARYADHLFAMKGGTLTACGTPQEIITPGLMRELYG LECIVMKDPVSGTPFIVPKGRHHSGTAALS >gi|224461045|gb|GG657759.1| GENE 905 943229 - 944245 913 338 aa, chain - ## HITS:1 COG:sll1408 KEGG:ns NR:ns ## COG: sll1408 COG2207 # Protein_GI_number: 16329192 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Synechocystis # 217 326 227 336 346 73 31.0 6e-13 MNYYSAETPEEYQELFYRQIGLQKTEPKEAWTVWESPGNGVIYSYGALDKIQSSAGCYTV PSDFLAEYQYRTEYLHFGIIYEGITYSLVENRLEAGSVPSVFLAVEKSSGGVNCWKKGQR FKGVEVSVEMVYLKSVLFPFIGAGENALSFLEENIRYIHLTQEMQSLIRRMEKLLREGKM TGPLHLSICLEFIALLLHPDNRERFCSKGQSFAKYIKVGKRKIKMTGEDFRKVVLAHKRI EQDAASFVTIYELSRKLGISEQKLKAGFKELYQQTIWDHANNVRMNEAVELLQDTALSVG EISERIGYQSQAAFINMFRKWCGLTPGQFRVQSPDNLR >gi|224461045|gb|GG657759.1| GENE 906 944226 - 945614 1438 462 aa, chain - ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 7 433 4 435 468 232 33.0 1e-60 MNENKTKMKLLGQEKVSKALLKLGIPTMAGMLISALYNAIDAYFVGGLGMSQMGAVSVVF PIVQLVIGLGMMFGAGASSYISRLLGSEEYQQADRAASTALISGVAVGAVIIAGILCDLD GVLKALGATETILPYARAYARIYVTGSILNVFTVSMNNILTAQGAVRVTMAAMLSGSVVN VILDPVFIYGLNWGIEGAAAATVLSLCINLAFYVVYLTRKKGVLRLSVKKFTWSRHLYGE VLKIGIPVLAFQLFSSVSLGLANMAAKQYGDYAVAAVGAVSKVLMVGTYVVFGFMKGFQP FTGYNYGAKQYRRVKSAIRLSLTWSSVFCIAAGGLCVILSEQVIRLFGSDADMISFGSRV LTVNAVTFCTFGLQMVYASLYLSAGRSMIGSILSLGRQGVFFIPLILILPRVFGIDGLIW AQPAADLIAAVVTVCFAVTTDSRLGLEKEAGKGERENELLQR >gi|224461045|gb|GG657759.1| GENE 907 945723 - 946283 554 186 aa, chain - ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 184 1 186 189 100 36.0 1e-21 MAQVLKEDIREKILQSALEEFYEKGFTGAVMRSIAGRARIPTGLIYSYYPGKEVLFEEVL RPVRYNWKSVLIEGAGRHSGTFERLNKREMDCIRNLLEHRKEFIILMDKSGNTKFSNEKE NFILEIEQHLKCLMQHNGKYDETYIHIVVDNFVEGLLQVMYHCNEKEHALLTMEKLIQMY LYGIGL >gi|224461045|gb|GG657759.1| GENE 908 946374 - 947375 874 333 aa, chain - ## HITS:1 COG:STM0013 KEGG:ns NR:ns ## COG: STM0013 COG0484 # Protein_GI_number: 16763403 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Salmonella typhimurium LT2 # 4 319 3 350 379 169 35.0 1e-41 MAVKRDYYDILGIHKNAEEAEIKKAYRKLVKKYHPDTNAGDAQAEQQFKEVTEAYTILSD PEKRKLYDQFGHAAFDGSGAGAGAGGRTGGAAGTGGTYQEYHFEGGNMDDIFGDIFGDLF RGGKADDAEYQRFGGGFGRSRYRRKGQDVRAEVSVSFDEAVFGCDKIISFQNMERADGSV QSLQVHIPAGIESGKSIRLRGKGMPGVNGGEGGDLLLKVTVGEKYGFERKGQDVYTTASI PFTTAVFGGEVRVRTLYGEVLCKIREGTQSGTKIRLRGKGIVSMKDPDVHGDQYVTVQIE VPKHLTGEAEQKLKEYEEACKSGSRGRKKNSAA >gi|224461045|gb|GG657759.1| GENE 909 947547 - 947906 520 119 aa, chain - ## HITS:1 COG:no KEGG:Closa_2012 NR:ns ## KEGG: Closa_2012 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 119 1 119 119 140 68.0 2e-32 MEKEVLNYVVEKANELKDAATCSAEAKEAAVKWLDAVGTDQEAAETEKFIAELEEDIMPV DGLIGFAESEAGAAVFGADTAKNVAAHARDIKAKGAKYCDCPACAACEAILEKKELLLK >gi|224461045|gb|GG657759.1| GENE 910 948010 - 948084 96 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDVFGLYSGCGPVRDPIAAAVKQ >gi|224461045|gb|GG657759.1| GENE 911 948081 - 948710 406 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 11 190 1 180 185 160 41 2e-37 MGKAVRRGEEMERCKWCLCNDAMIKYHDEEWGIPLYDDRKQFEFLMMEVMQCGLNWNMMI QKREIFCKCFDGFDYEKVASYGEGDIRRILEADGMIRSRRKIEAVIHNAGCFLKIQQEYG SFSEYLWRFAGGKTIFYNRHERGEQPARNGLSDKVSGDLRRRGFKYLGSVTVYSHLQACG IINDHVKECFRYKYIAEHYPFVYKRRNKE >gi|224461045|gb|GG657759.1| GENE 912 948715 - 949770 995 351 aa, chain - ## HITS:1 COG:FN1711 KEGG:ns NR:ns ## COG: FN1711 COG0275 # Protein_GI_number: 19705032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Fusobacterium nucleatum # 52 344 9 307 314 163 37.0 5e-40 MEDREKKHKRRVRYSGAYPKRFEEKYKEHQPEKYAKTVSRVIQKGSTPAGMHISICVKEI LEFLQIRPGQRGLDATLGYGGHTSKMLECLKGQGHIYALDVDPIESVRTAKRLEKLGYGP DILTVKLQNFAKIDQVSREAGLFDFVLADLGVSSMQIDNPDRGFTYKAEGPLDLRMNPQK GISAAERLRDITKEELEGMLRENSDEPYGAEIAEAVTEKIRKGGEIETTTQLYKTIEEAL AFLPEKDRKEAVKKSSQRTFQALRIDVNSEFEALYSFLEKLPDVLAPGGRVAILTFHSGE DRLVKKSFKQFAKSGVYSEISKEVIRPSQEECRQNGRARSTKMRWAVRAEQ >gi|224461045|gb|GG657759.1| GENE 913 949970 - 950257 318 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568789|ref|ZP_03777814.1| ## NR: gi|225568789|ref|ZP_03777814.1| hypothetical protein CLOHYLEM_04868 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04868 [Clostridium hylemonae DSM 15053] # 1 95 1 95 95 139 100.0 5e-32 MSNIKALLKLAADSMKNRTLDELLKNDADFQKRLEEEKEAFIAVRKLELTADQRAAVNTL ISRKEETEYDYRVNSYIAGMIDAYEILKQFDLTKE >gi|224461045|gb|GG657759.1| GENE 914 950489 - 950659 112 56 aa, chain + ## HITS:1 COG:no KEGG:Ethha_1740 NR:ns ## KEGG: Ethha_1740 # Name: not_defined # Def: hypothetical protein # Organism: E.harbinense # Pathway: not_defined # 1 56 1 56 57 65 57.0 6e-10 MPSDVIKFTVRTDADLMKRFRYIAEYNARSANRELEVLMKRYIAEFEKKHGKIDLE >gi|224461045|gb|GG657759.1| GENE 915 950826 - 951821 989 331 aa, chain + ## HITS:1 COG:BS_splB KEGG:ns NR:ns ## COG: BS_splB COG1533 # Protein_GI_number: 16078457 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Bacillus subtilis # 6 331 10 342 342 178 32.0 2e-44 MKFDAVYYEPDSLSYELGKQLKTKFADLPWIPVDSHNSIKEMREKENSEFGKMKRNLIIG IRKTHKYVENHKVSDYLVPYTSSGCTAMCLYCYLVCNYNKCAYLRLFVNREQMLDRLIKK GAASDKPLTFEIGSNSDLVLENTITGNLQYTISRFTEEGTGSLTFPTKFDMVDSLLNLPH RGKVIFRMSVNPQPIINRVELGTSDLNSRIKAVNSMCEAGYPCGLLIAPVILTDGWKAMY TELLEQLRAGLTKKMQKQMFLEIIMMTYSYIHRAINSEAFPNAPDLYDRQLMTGRGRGRY CYKPEARAEAEEYLRSEVKRVLGDVKILYIS >gi|224461045|gb|GG657759.1| GENE 916 952055 - 952477 453 140 aa, chain - ## HITS:1 COG:MA0416 KEGG:ns NR:ns ## COG: MA0416 COG1917 # Protein_GI_number: 20089309 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanosarcina acetivorans str.C2A # 1 140 1 141 141 142 51.0 1e-34 MSTKQEVTEQMVFPMGEKNDAFSKYFVGQSYLNMISTEQVVIGNVTFEPGCRNNWHIHHA DQNGGQMLLCTAGSGYYQEWGKEPRKLQPGDVVHIPAGVKHWHGAAPDSWFTHLAIEVPA ENGSTKWCEAVPDEEYGKLK >gi|224461045|gb|GG657759.1| GENE 917 952678 - 953793 894 371 aa, chain - ## HITS:1 COG:CAC3027 KEGG:ns NR:ns ## COG: CAC3027 COG1408 # Protein_GI_number: 15896279 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 47 367 79 388 392 129 29.0 9e-30 MVILVLGGMLLVLASGLYWLAGRWLSLFGVCVKNRNIRLLRAGVVLVVALLCLLWRMTIL IALHLMVLFFLMDVGAFVLRRAGRKHREERWFRIARRIYRSGLVPVFLTCLILGYGAYNM GQIVPTEYTISTDKIQSDYRVILITDTHYDTVQNPDVLKSKIEEMNAWEPDLIVLGGDIV EEGTSKKSMEEVFHVLGGLKSTFGTYYVYGNHDRQYYADAALGTRTYTVQELQKAIESNG ITILCDSWVPVGEEIVLAGRNDVSAMSGRAAAKDLLKGTDRDRFIITADHQPVETKENAK LGVDLQLSGHTHAGQIFPAGYFTDWFLEPNYGKYEKEGCTLIVSSGATGWGFPVRTQEKC EYVVIDIKSEK >gi|224461045|gb|GG657759.1| GENE 918 953860 - 954378 212 172 aa, chain - ## HITS:1 COG:no KEGG:LLKF_1361 NR:ns ## KEGG: LLKF_1361 # Name: yndA # Def: GNAT family acetyltransferase (EC:2.3.1.-) # Organism: L.lactis_KF147 # Pathway: not_defined # 1 167 1 167 181 128 37.0 1e-28 MKLTVKKIHRNLPDYKKIKALYKRAFPKEERFPAGILQILAVLNIFDGLAYYDGKQFCGF LYSIVREKGVWLMYLAVDDNMRSKGYGSRILAYVKKKYPDRPVILEVEEPDDSAENAEQR RRRIAFYKRNGFYETKQYIKIRSVRYEIMSTEEGFTAEDFRDLRKEMFRRKS >gi|224461045|gb|GG657759.1| GENE 919 954436 - 954990 509 184 aa, chain - ## HITS:1 COG:FN1223 KEGG:ns NR:ns ## COG: FN1223 COG0778 # Protein_GI_number: 19704558 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 184 1 174 175 136 42.0 2e-32 MNETVKNIVTRKSCSDFKPEHISREELDEIIEAGLNAPSGMNSQCVRLIAVQDDETVKRL SGLNAAIAKEAMSKINPAMAENFPADPFYGARDVIAVVADKKGGTYIYDGSLAMGNLMNA AWSMGIDSRWIHRAKEVFDTEEGKKILEKCGITDDVEGIGFCILGHAAAEKEKTEIKPNR VFYL >gi|224461045|gb|GG657759.1| GENE 920 955058 - 955594 372 178 aa, chain - ## HITS:1 COG:no KEGG:BL02215 NR:ns ## KEGG: BL02215 # Name: not_defined # Def: hypothetical protein # Organism: B.licheniformis # Pathway: not_defined # 5 139 3 139 185 67 33.0 4e-10 MNENDLRVIKTMEAVESSFLDMLDELPAEKITVRELSRRAKINTGTFYLHFQNIDDLYDK LIQAFFDEFIASIDYFPLFISQPELFLKKLRNTVHQKIAHCRRLFKHRDMSLSKPCLIRL LRKKIYESCPLEVSRENDIRLEAVLTSLFHMNLKYDQECPEIIQKVFTDMIRGLFVTL >gi|224461045|gb|GG657759.1| GENE 921 955925 - 956704 191 259 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568800|ref|ZP_03777825.1| ## NR: gi|225568800|ref|ZP_03777825.1| hypothetical protein CLOHYLEM_04879 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04879 [Clostridium hylemonae DSM 15053] # 1 259 1 259 259 492 100.0 1e-137 MKRYIPEDVNIFFEESNLELVYEEKKLLKLVYELIVSIEANIPMSGGNFDTYEGCCIIWA RNIVTYAKEAYNNAQIGSFISFAMMQRCIVENYVCACFIKRYKEEKLWKKWFLSSMTSTS NLMKKLTGRVDKYEQFQIDIDELYHESDISAECDLNSAYGWTSEIIKKKKPTFFDLCEYI DKSIYNDYRWLCDFSHGVNAINKVYRFTFVHSYINLLTNFVLYLQRSFEELLDDIEDQSY WKQKQIFWDAMIEWEIEFN >gi|224461045|gb|GG657759.1| GENE 922 956819 - 957712 251 297 aa, chain - ## HITS:1 COG:MA2133 KEGG:ns NR:ns ## COG: MA2133 COG3177 # Protein_GI_number: 20090976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 56 264 27 236 326 146 40.0 4e-35 MYISVKQASEKWGISDRRVRILCSEGKIPGVIREGRSWRIPAKAGKPEDGRYKSVENLLE SIDRKKTELDSRRPLTEGEVERLTEEFVVEYTYNSNAIEGNTLTLRETDMVLRGLTIGQK PLKDHMEAIGHKEAFDLVRDFVKDQEPLSERVIKQIHYLVLADKKDDCGVYRRVPVRIMG AKHEPAQPYLIKPKMEQLLEFYNNSKEHIIPRLARFHIEFEGIHPFIDGNGRTGRLLVNL ELMKAGYPPIDIKFTDRIVYYNAFDEYHVKHNLGAMEKLFAGYVNDRLDSCLVMLEE >gi|224461045|gb|GG657759.1| GENE 923 958237 - 959799 1487 520 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568803|ref|ZP_03777828.1| ## NR: gi|225568803|ref|ZP_03777828.1| hypothetical protein CLOHYLEM_04882 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04882 [Clostridium hylemonae DSM 15053] # 1 520 1 520 520 1081 100.0 0 MREPKTNFAMLLRLLGARPCDVCEAVGADKSLVSRWCNGKQKLMPGHGWVDKVADYLILL DGRLREPVLREVLAAYYPDETLDTPELQRVVLLEWLAAMGHLPAQQQTDRPGLAGLVMAR AAALSTPQPAPAPVEPPQPLPMKNAVVYGRKGVQGSALQYLDLVLAQTEPQEILYVCPEG LDMYTRDEKFGAVLMDRLMEVFAAGHTLSVVLRTDYKMTDVSAFSGRWLVAHLLGYVRSY YFDEFHKTYDEKMLVVVRDKMAMKVTDNRLTDDSGVYTAIYFDKPTVEQIWQESAGYQSR SKQRFHYHLFEQPDGYLRGVTPLPDRAHYQFVRLPHFGIKGAEWGQEDFNITDAEREKLL LDFSPLCVPASYYEAQTPVRYLYCEDDIEDALLKSRHVCPELTAMLGRRVVMTTQTLVDR LALLKKMLEQKKDFEVCFVRDEHFKKLTMQIACWGDVAAIGWIAGGKSTACKDYTNTNAL TGFCESIWAKIPNIMKSRRAALRKLDTWLKKAAKYGYRVE >gi|224461045|gb|GG657759.1| GENE 924 960057 - 960344 85 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568805|ref|ZP_03777830.1| ## NR: gi|225568805|ref|ZP_03777830.1| hypothetical protein CLOHYLEM_04884 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04884 [Clostridium hylemonae DSM 15053] # 1 95 86 180 180 174 98.0 3e-42 MDVKSGILRLKNICEMKYVFTASIHIYQYRNRLMHYTLNGTFDHIIKDIASAMQEIAEFV EKEVIEALPKQAQKDFQNSIADYRKYAVILKELKL >gi|224461045|gb|GG657759.1| GENE 925 960629 - 961000 254 123 aa, chain - ## HITS:1 COG:no KEGG:BDI_2962 NR:ns ## KEGG: BDI_2962 # Name: not_defined # Def: hypothetical protein # Organism: P.distasonis # Pathway: not_defined # 1 108 154 261 268 135 62.0 5e-31 MNYRIHTDAIKENLNPPELTPVQVAYTYANEADVLNVVLFGKIAKQWKDENPALKGNMRD AATLNQLLVLSNLESSNAVLINQGKNQKERMELLRQLAVQQLQTLEMVSLNNLPKLDVES NMK >gi|224461045|gb|GG657759.1| GENE 926 961346 - 961483 147 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|197302050|ref|ZP_03167111.1| ## NR: gi|197302050|ref|ZP_03167111.1| hypothetical protein RUMLAC_00778 [Ruminococcus lactaris ATCC 29176] hypothetical protein RUMLAC_00778 [Ruminococcus lactaris ATCC 29176] # 1 45 7 51 287 89 93.0 1e-16 MGKAIKDTIHANGIDIGIYTLDFENEFISLTDIARYKSDDPTAVI >gi|224461045|gb|GG657759.1| GENE 927 961647 - 961757 168 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYDAPNAAEKLKQPKKHPTVEKLEVIKDALKYFGVI >gi|224461045|gb|GG657759.1| GENE 928 961847 - 961942 92 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLEFGEGEGKEPLDKIGERAKKYQPKPKIT >gi|224461045|gb|GG657759.1| GENE 929 961953 - 963335 1614 460 aa, chain - ## HITS:1 COG:CAC1435 KEGG:ns NR:ns ## COG: CAC1435 COG2265 # Protein_GI_number: 15894714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 1 457 4 454 456 427 47.0 1e-119 MKKGQVYEGVITSVEFPNKGKVFLPDEDKTVTVKNGIPGQKVKFSVSKIRKGKAEGKILE VLRPSELEMTPDCPHFGQCGGCTYQNLPYEEQLKLKESQVKSMMDEAVDGDYVWEGIKPS PARQEYRNKMEFSFGDEYKDGPLALGMHKRGSFHDIVNVADCRIVDEDYRKILACTLDCA KKSGLPYYHRMKHTGFFRHLLVRKAVNTGEILIDIVTTTEYDFESGFGQEYWAGQLLDLP LDGKIAGILHTKNDSVADVVKDEGTDIIYGQDCFYEELLGMKFKITPFSFFQTNSLGAEV LYEMARTYIGDTKDKVIFDLYSGTGTIAQILAPVAKRVVGVEIVEEAVAAAKENAKLNGL DNCTFWSGDVLKVIDELGEVPDLIVIDPPRDGVHPKALEKITNFGVERMVYIACKPTSLA RDLEMLQGRGYEVERMGCVDLFPGTVHVETVVLLSHKSPR >gi|224461045|gb|GG657759.1| GENE 930 963361 - 964302 1149 313 aa, chain - ## HITS:1 COG:slr1870 KEGG:ns NR:ns ## COG: slr1870 COG1432 # Protein_GI_number: 16330259 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Synechocystis # 3 240 5 243 249 155 38.0 1e-37 MDEQFFALLIDADNISAKYIKPILTELSKYGNITYKRIYGDWTSTQHSKWKDELLTNSIT PIQQFSYTQGKNATDSAMIIDAMDILYTNDVHGFCIVSSDSDFTRLVSRLRESGKLVIGM GENKTPEPFRKACDKFTILENLLNEPVPGEEEELEETEELHGGLRGERIEDEIIKMIIEN QDNNKQTGLGEVGSRLVSLYPDFDVRSYGYNMLSRFLEDFTRIQLVKKGNFMSVTLKEDK GMKEDIDRFVLKLVKEAGKDGIELSILGNRVYEKYKNFKISDYGYSQFSQYIKSLRSIRV QQDKTIMKAKYAD >gi|224461045|gb|GG657759.1| GENE 931 964445 - 964687 389 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|331091396|ref|ZP_08340235.1| ## NR: gi|331091396|ref|ZP_08340235.1| hypothetical protein HMPREF9477_00878 [Lachnospiraceae bacterium 2_1_46FAA] hypothetical protein HMPREF9477_00878 [Lachnospiraceae bacterium 2_1_46FAA] # 1 58 1 58 80 80 74.0 3e-14 MSKVEDFIAATKLSELVNKKEDDKHCKTVLWVLAIVGAVAAVAGIAYAVYCFFTPDYLED FEEDFEDDFDDNFFNDEDQV >gi|224461045|gb|GG657759.1| GENE 932 964802 - 967033 2851 743 aa, chain - ## HITS:1 COG:BS_yerF KEGG:ns NR:ns ## COG: BS_yerF COG0210 # Protein_GI_number: 16077729 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus subtilis # 7 742 12 738 739 681 49.0 0 MSIYETLNEQQQEAVYHTEGPLLILAGAGSGKTRVLTHRIAYLIEEKGVNPWNILAITFT NKAAGEMRERVDNIVGFGSESIWVSTFHSTCVRILRRHIDKLGYDTNFTIYDSDDQKTLM KDVCRLLQIDTKIYKERTLLGAVSSAKDELITPEEYRIRAEGDYNKQKIAQVYEEYEKQL RANNALDFDDLLVKTVQLFQTQADILDYYQERFRYIMVDEYQDTNTVQFELIRILASKYR NLCVVGDDDQSIYKFRGANIKNILNFEQVYEDAKVIKLEQNYRSTSNILNAANAVIRNNY GRKDKTLWTDNGEGDKIHFRQFDSAYDEAEYIVGDIREQVDSGGCTYNDNAILYRTNAQS RMFEEKFVTANIPYKVVGGVNFYARREIKDLLSYLKTVDNGQDDLAVRRIVNVPKRGIGL TSINRVQEYASSRGIGFYEALCAVDLIPNIGRGASRLESFVALIEHFKTDAREMSISDLM QEIIDETGYIESLQAEDSIEAETRIENIDELMSKIAAYEEACEESNEPVTLSGFLEEVAL VADIDSLDESSDYVVLMTLHSAKGLEFPRVYLAGLEDGIFPSYMTITADDPEEVEEERRL CYVGITRAKEELTLTCARRRMIRGETQYNKMSRFLKEIPMDLLATGAVFEKEEEPPRQGA YAQARQTFRTKAFGGAARPVRQFAVSDGSGPGYGVGDRVRHIKFGAGTVTAITEGGRDYE VTVDFDGPGTKKMFATFARLEKI >gi|224461045|gb|GG657759.1| GENE 933 967030 - 967422 497 130 aa, chain - ## HITS:1 COG:no KEGG:CLJU_c14440 NR:ns ## KEGG: CLJU_c14440 # Name: not_defined # Def: hypothetical protein # Organism: C.ljungdahlii # Pathway: not_defined # 1 123 1 123 123 70 29.0 3e-11 MRSSVLCYNLKGTKKGKQIAMIFGFLGYKVRHVEKEEYMLPVGALAGTDKAEDAASVCAE DGFSDEMLVINAASEDMMDKALFLMRKEGIKIGLKAMLTPSNREWTSIALHDEIQKEHEY MKEMERNKKD >gi|224461045|gb|GG657759.1| GENE 934 967598 - 968884 1184 428 aa, chain + ## HITS:1 COG:BS_yjeA_2 KEGG:ns NR:ns ## COG: BS_yjeA_2 COG0726 # Protein_GI_number: 16078275 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 220 415 15 211 217 176 44.0 6e-44 MEQQTNNTHSHTHSGHISRRRRKLKLYRNLKIAAGCAAAVLLVSAAFLTVRAYTQPIDIT LKLNKAEITQGEELPTLKATAVYNGKNPDKMLDKKRKLTVKDFINELNSGKYYTFSCNAD PAVDNTYPVKIVLNEDFKKQLKEKWASRLKLDIQDGDLIVKNKLGAWDGRKFKLNSGAYM AGDFLTSRGNTYYFDENGDMVTGQRQIGLKLCTFDKDGKLTAKSDAAVQPDRPMIALTFD DGPGERTQELLGVLERYNAHATFFMQGMNVPKYPDAIKKMLETGCELGNHSYNHPDLTKL KPEKIKKQIGDTNAAIQNICGQPADVLRPPYGAINDKVRASAGMPMILWSVDTLDWKTKD TQATVESIRASAGDGAVILLHDIHSFSVDAALAVIPELTRQGYQLVTISEMAAAKGVSLE NGKTYGSF >gi|224461045|gb|GG657759.1| GENE 935 968849 - 970264 1658 471 aa, chain - ## HITS:1 COG:FN0944 KEGG:ns NR:ns ## COG: FN0944 COG0534 # Protein_GI_number: 19704279 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 14 450 16 452 455 305 39.0 1e-82 MSQNVNEYLVQEPVGRLMLKFSVPCIMSLLVSALYNIVDQIFIGRGVGYLGNGATNVVFP ITVIALALALLVGDGCAACLSICQGMKNAEGAHKSVGSAVVMITAGGLLLTMIFLLVKEP MLAGFGATENNIAYAEEYFQYIIIGIPFFMFANAMNSIIRADGSPQFAMLSTLAGCMINV VLDPVAIFVLHWGMMGAAVATVAGQAVSALLAVYYLFHTKSFRLQKSSFRLSAGLLKKTL PLGISSFLTQVSIVAIMIVMNNVLVFYGARSKYGADIPLTVVGIVMKVFQIVISVVVGIA AGAQPIVGYNYGAGLYGRVKEIFKKMMLAELAVGIVSCIGFECFPLKIIGLFGSENGLYN EFAVLSFRVFLGMIILCCLQKSASIFLQSLGKPVLSMSLSLLRDFVLSVPLALILPGIFG VTGALYSAPAADIVSFAAAVFCIYHVFREMKTEERKKEKSLKTSVCLSILE >gi|224461045|gb|GG657759.1| GENE 936 970481 - 971437 1000 318 aa, chain - ## HITS:1 COG:lin2180 KEGG:ns NR:ns ## COG: lin2180 COG1073 # Protein_GI_number: 16801245 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Listeria innocua # 49 304 53 311 319 159 36.0 6e-39 MQKRLKTSVKAAAAIAAAAAADFAALRIFLNMAVERRCRFFKSQDDRKKPCREEIRRGMD WLDKQRSETVTVKSFDGLKLKGHYIEARDAGRIVVMFHGWRGTWKHDFGACARELYEEGS SLLLPEQRAQGESEGTYMGFGILERHDCHTWLDWVEEHNKENVPVYLYGVSMGAATVLMA AGERLPECVKGIIADCGFSRPGDMVLNFGQKHFRLVGTRTVKRLTRRCRRKAGFGFDDYS APEAMENCTVPVLFIHGKADTFVPCEMTLHNYEACRSRKRLLLVDGAEHCESYLKDRGAY MEAVHWLWEQNDGNSAEK >gi|224461045|gb|GG657759.1| GENE 937 971421 - 972065 711 214 aa, chain - ## HITS:1 COG:mlr4833 KEGG:ns NR:ns ## COG: mlr4833 COG1309 # Protein_GI_number: 13474047 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 2 203 11 206 210 61 25.0 2e-09 MRTKERIIEEALTLFSTKGYEGTSVKNIAEAVGIKDSSLYKHYKSKKEIFDTIVQEMSSR MERMSQTLGLPDEADMERAARIYGDLTTEGLIQLSRQIFLFYLKDEFAARFRRMLTIEQY RTKEIYGVYRKLFMEDSIAYQTALFREMTRWGVLKEADPAAMAMNFYAPVFFLLNKYDQE PEREAEAFLELERHVREFARIYARSEEGNDAEET >gi|224461045|gb|GG657759.1| GENE 938 972076 - 973158 751 360 aa, chain - ## HITS:1 COG:CAC1334 KEGG:ns NR:ns ## COG: CAC1334 COG0535 # Protein_GI_number: 15894613 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 6 360 7 361 363 419 55.0 1e-117 MRENELEAYLSKGVERIVRGILRASAENPKESLFMSRYAVSVREAGRRRTKLEREGEHIP PFLIASITSACNLHCQGCYARANASCTDGGGQAQLTAAQWGEIFCQAGELGVAFILLAGG EPLLRRDVLAEAGRHRRILFPVFTNGTMLENAYIKLFDENRNLIPILSIEGAEKLTDQRR GDGVYAAVRAAMERMAESGILFGASVTVTKENMREVLSEDFTAHLVRQGCRAVIYVEYVP ADKGTGYLAPGEAERAYMEQRIGILRESCREQLFLSFPGDEKSSGGCLAAGRGFFHINAE GGAEPCPFSPFSDTDLLHTSLREALRSPFFVRLRTEGLLTAEHTGGCVLFEQEQAVKECL >gi|224461045|gb|GG657759.1| GENE 939 973250 - 973570 297 106 aa, chain - ## HITS:1 COG:no KEGG:Closa_2289 NR:ns ## KEGG: Closa_2289 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 3 101 4 102 103 76 39.0 4e-13 MAFGIGINTESPDRGPVRGRQEDVACGCWFTSRGNMFPKFIKYQDRDGVIHSISNIEVLY SEKENFCGIPMVSYACRTVSEGKEYFFTLLFHQTDCKWKIVWKGDE >gi|224461045|gb|GG657759.1| GENE 940 973582 - 974850 1301 422 aa, chain - ## HITS:1 COG:CAC0285 KEGG:ns NR:ns ## COG: CAC0285 COG0389 # Protein_GI_number: 15893577 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Clostridium acetobutylicum # 4 399 3 395 396 344 43.0 2e-94 MSEQIIYHIDVNSAFLSWEAVFRLGFLGASVDLRDIPSAIGGDVKQRHGIILAKSIPAKA YGIKTGESIPEARQKCPGLYIAPPNYGLYENCSRAFTNILKEYTPVVEQYSIDEVFMDMS GMQRLFGDPVKTAFDIKERIRRELGFTVNIGVSSNKLLAKMASDFKKPDRVHTLFPEEIK TKMWRLPVNDLFFVGRATAKKLHKLGVYTIGQLAGADPELLRMHLKSHGEVIWNFANGRD FSIVEAAPVPNKGYGNSTTTPFDVTDAAAAKLVLLALAETIGMRLRKDSVKIQVISIGIK DREFRQMSHQTVLPDPTNITKEIYEVSCRLFEELWDHAPIRHLGIHTARVKEEGELRQLS LFDHTDYRKLETWDRTIDRVRGRFGIDAVKRAAFLAVPEIDHLSGGVSREKRTVDYEKLK IE >gi|224461045|gb|GG657759.1| GENE 941 974938 - 975516 592 192 aa, chain - ## HITS:1 COG:BS_yoqW KEGG:ns NR:ns ## COG: BS_yoqW COG2135 # Protein_GI_number: 16079108 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 162 1 179 224 77 31.0 2e-14 MCGRYYVDDETAREIEKIVRQLDRKLLIKGEIYPGQKASVIARKKGEAVLRQMEWGYPAP QNKGLVINARSESALQKRMFSESVMNRRCLIPAGWFYEWDRDKNKITFKPEGRQGMFLAG FWKYFSEGNRFIILTTNANASVRSVHDRMPLILDEERSRAWLEDEKMYGQLLGLKPDIRL EKEGFMQESLPL >gi|224461045|gb|GG657759.1| GENE 942 975644 - 976255 608 203 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1394 NR:ns ## KEGG: EUBREC_1394 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 193 1 193 217 209 55.0 6e-53 MTIDTKDMLNSILSSISRIDYVRPDSIPNIELYMDQVTTFMEKELSTTKRFPEDKILTKT MINNYAKNNLLPPPVKKKYSREHILVLIFIYYFKNILSIKDIETLLAPITEKYFDNDSSF DLTSIYEEICQTEKERIDSLQKEVARAHRTAAESFSQAPEDERDYLQLFSFICSLSFDVY VKKLLIEKLIDELPAPDTENKKK >gi|224461045|gb|GG657759.1| GENE 943 976277 - 976570 354 97 aa, chain - ## HITS:1 COG:BH0639 KEGG:ns NR:ns ## COG: BH0639 COG4496 # Protein_GI_number: 15613202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 4 95 5 96 100 114 66.0 5e-26 MSKKIRTEAVDYLFSAILSLDDKEECYTFFEDICTINELLSLSQRFEVAKMLREHKTYLE IAEKTGASTATISRVNRSLNYGNDGYDMVFERIKEDK >gi|224461045|gb|GG657759.1| GENE 944 976635 - 977375 883 246 aa, chain - ## HITS:1 COG:CAC0509 KEGG:ns NR:ns ## COG: CAC0509 COG1387 # Protein_GI_number: 15893800 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Clostridium acetobutylicum # 10 246 5 238 244 172 38.0 7e-43 MAEQNINIAVDTHTHTLASGHAYNTLREMARMAADKGLSGLAVTEHAPEMPGTCHSFYFQ NMRVIPRNMYGIELLMGVELNVMDENGSVDLPESLIRELDIAIASIHVPCYKDVLGRAEI TQTYINVMEKDHIDIIGHPDDGRVPVDYEVLVKEAKRTGTLLEVNNSSLRPGGFRQDTRH NAACMLRLCKKYETMVVLGSDAHMDVDIANCRYSMEVVDEIGFPEELVANTSLEKLKACL KRNKKL >gi|224461045|gb|GG657759.1| GENE 945 977585 - 977800 310 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568827|ref|ZP_03777852.1| ## NR: gi|225568827|ref|ZP_03777852.1| hypothetical protein CLOHYLEM_04906 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04906 [Clostridium hylemonae DSM 15053] # 1 71 32 102 102 128 100.0 2e-28 MKDKKDLENERLIDSYDYLSNAASSWDCTGLIPSEPISTGELESYEDLYHFLPPNGKASN LKPEEKDEQTK >gi|224461045|gb|GG657759.1| GENE 946 977837 - 978313 551 158 aa, chain + ## HITS:1 COG:no KEGG:BcerKBAB4_5499 NR:ns ## KEGG: BcerKBAB4_5499 # Name: not_defined # Def: hypothetical protein # Organism: B.weihenstephanensis # Pathway: not_defined # 18 158 21 162 164 124 45.0 1e-27 MADMNLVPVTGIVQNITSMRDNCCELLVSIRNSDGITNFVVGPDSYVINEVRLRPGMSVI AFYDANLAIPLIFPPQYRAVIIGRKNPNENMYAGYFDENLTSEDGSLQLNMTGTTDVVTS NGQRFNCDLGGRLLVVYYSASTRSIPAQTTPRRVIVLC >gi|224461045|gb|GG657759.1| GENE 947 978387 - 979382 1071 331 aa, chain + ## HITS:1 COG:BS_ansA KEGG:ns NR:ns ## COG: BS_ansA COG0252 # Protein_GI_number: 16079415 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Bacillus subtilis # 1 328 1 326 329 273 43.0 2e-73 MKKILMIATGGTIASKEGADGLTPAMTGEELASFVPGIEDKCELDILQLMNIDSTNMRPR QWVEIRDAIMERYGSYDGFVILHGTDTMAYTAAALSYLIQNTPKPVVITGSQKPMGNPYT DAKLNVYQSVLYALDDSSCNVSIVFNGKAVAGTRGRKQRTRSFDAFESMNFPLLAVIHDD RIVRQYSGPLPSEEELVTYTHLNDRVFVLKLTPEAKADIFELLNSRYDAIILETFGIGGI PEYDDSFEKAIFGWVDSGKTLAVTTQVPEEGCDLDVYKVGKKYSEHPGILQAGDMTTEAI VAKMMWILGQTGDRDEIRALFFKEINHDRTV >gi|224461045|gb|GG657759.1| GENE 948 979530 - 980225 703 231 aa, chain + ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 230 3 230 233 220 48.0 2e-57 MAEKILIVDDEQEIADLVALYLQNENFTVFKHYNALDALDCIRSETPDLAILDVMMPDMD GLELCRNIREQYRYPVIMLTAKDGEIDKITGLTLGADDYITKPFLPLELVARVKAQLRRY KRYNTGAGPDEDVIVHSGLVINVRTHECTLNEKPLSLTPTEFSILHILCRKKGEVVSSEE LFHEIWNDEYFTKSNNTITVHIRHLREKMGDSFEDPKYIKTVWGCGYKIEN >gi|224461045|gb|GG657759.1| GENE 949 980215 - 981357 885 380 aa, chain + ## HITS:1 COG:BH1809 KEGG:ns NR:ns ## COG: BH1809 COG0642 # Protein_GI_number: 15614372 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 73 377 52 346 351 159 35.0 6e-39 MKTDTSKSVKILAAVLLIPVLCIALYYLVDSVWNGAFVDWFEKNYMSTRDEYLPDAGHYA VVRSPAWSELKPLLLILLICAAFLWLVSILASAHFYARTKVRRSITKTGRMLRAYMLQDK DTTEIFPKDYAELSVQMAEIKATMHRHEQLLKEEAARKNDLITYLAHDLKTPLTSVIGYL SLLDEAPDMPDGQKEKYVRITLDKARRLEKLTNEFFEITRYNLQQISLEKETIDLSYMLV QMTDEFYPLLTSRGNTAQLTVRENMTVYGDAVKLARVFNNILKNAIAYSYPNTPVEIWAE NREDDIWIYFRNKGKTIPAQKLASIFEKFFRLDEARTTNAGGAGLGLAIAKEIVTLHGGN ITVKSENELTTFCLVLPSCH >gi|224461045|gb|GG657759.1| GENE 950 981630 - 982490 695 286 aa, chain + ## HITS:1 COG:RSc0327 KEGG:ns NR:ns ## COG: RSc0327 COG1686 # Protein_GI_number: 17545046 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Ralstonia solanacearum # 32 243 45 247 397 128 36.0 1e-29 MLEKGNAAESPYGSSASPLTVDLKNLYSPSAVLVDLDTGKTIAGNNSDDTIYPASLTKIM TAILAVEKTENLDEIITLPYDFFQNLYAEEASMAGFEPGEAVCLRDLLYGILLPSGAECC LAFADKIAGSEEDFVKLMNKKAEALGMEHTQFCNSTGLHDDEHYSTVEDLALLLKYALGN DDFREAFTASRHSTRPSAQHPGGFTFYSTMFENMSSAKVTGGEILGGKTGYTKEAGLCLA SLADVNGKEYILVTAKADGNHDTEQFHILDAVNVYNQIGASAQNSQ >gi|224461045|gb|GG657759.1| GENE 951 982544 - 983590 1242 348 aa, chain + ## HITS:1 COG:CAC0620 KEGG:ns NR:ns ## COG: CAC0620 COG0715 # Protein_GI_number: 15893908 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Clostridium acetobutylicum # 49 348 34 335 338 287 48.0 3e-77 MKKRLLAVLLVAVMGMTMLAACSSSKEEKDTKDAAETAGETKEQKTVDVTLNEVAHSIFY APMYIAIEEGYFKDEGINLDLVTGFGADKTMTAVLSGEADIGFMGSEASIYTYNEGANDY VVNFAQLTQRAGNFLVAREEMPDFKWEDLKGKLVLGGRKGGMPEMVFEYILRQNNLDPAK DVEIDQSIDFGSTAAAFSGGQGDFTVEFEPGATSLEKENEGYVVASLGTDSGYVPYTAFS AKKSYIDKNPEIIQGFTNALQKGMDYVQSHTPEEIASIIAPQFKETDLDTITTIVTRYYD QDTWKDNLVFEKKSFELLQDILEDANELDKRAPYDDLVTTDFADKAAK >gi|224461045|gb|GG657759.1| GENE 952 984837 - 987533 2363 898 aa, chain - ## HITS:1 COG:CAC0854 KEGG:ns NR:ns ## COG: CAC0854 COG0480 # Protein_GI_number: 15894141 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 6 644 5 640 644 555 43.0 1e-157 MKRIVLGILAHVDAGKTTLSESMLYLSGAVRRMGRVDHKDAFLDTYEMEKERGITIFSKQ AVFPLDGMEVTLMDTPGHVDFSAEMERTLQVLDYAVLVVSGADGVQGHTETLWRLLARYH IPTFVFINKMDQDGTEKERLLKELQDRLGGECVDFSPERDMEIFYEQIAMCDEALLEQYL AEERAGEEDIARLIRERKVFPCFFGSALKMAGVEELLRGIVQYTRQPVYSEVFGAKVYKI ARDSQGSRLTYMKITGGSLRVKEVVEAGHRESGREPFREKADQIRIYSGAKYETVQKAEA GMVCAVTGLTGTYPGQGLGAESASDMPVLEPVLTYRLVLPDGTDAHTMLADLRLLEEEVP ELHTVWKERLGEIHVNLMGEVQIGIIRRIIEERFGVAVQFDAGSIVYKETIRRAAEGVGH FEPLRHYAEVHLLMEPLESGSGLVFDSAVSEDELDGNWQRLILTHLEEREHPGVLTGSAI TDMKITLIAGRGHLKHTEGGDFRQATYRAVRQGLKKAESILLEPYYTFRLEVPAESVGRA MSDLQRMNGSFEPPKMSGDMSVLEGSAPVASMRDYQTEVNAYTRGRGRLSCMQGGYRPCQ NAEEIITAIGYDSEKDIENPTGSVFCAHGAGFVVSWDKVEEYMHVDSGWQGGSLEDETAR PGDSPEKRPAELSGAPACSEKELEEIFVRTYGPVKRKRPSERRRTESSNISAAEYRPPKK KREQAEEYLLVDGYNIIFAWDELKELAKVNIMSARDKLMDIMSNYQGFRRMTLILVFDAY KVEGNPGSVSTYHNIYVVYTKEAETADQYIEKTVHEIGRKHNVTVATSDALEQVIILGQG GRRLSAEGLREEVELAMQEMRSEHLKESRSTRSYLFDNLPDELADYVEELRMGEDSSD >gi|224461045|gb|GG657759.1| GENE 953 987684 - 990908 3758 1074 aa, chain + ## HITS:1 COG:AF1274 KEGG:ns NR:ns ## COG: AF1274 COG0458 # Protein_GI_number: 11498873 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Archaeoglobus fulgidus # 1 1070 1 1075 1076 1099 52.0 0 MSKRTDIHKVLIIGSGPIIIGQACEFDYSGTQACKALRGLGYEIVLVNSNPATIMTDPET ADVTYIEPLNVERLEQIIAKERPDALLPNLGGQSGLNLCSELAKAGVLEKYNVQVIGVQV DAIERGEDRIEFKKAMDSLGIEMAKSEVAYSVEEALAIADELGYPVVLRPAYTMGGAGGG LVYNKDELKTVCARGLQASLVGQVLVEESILGWEELELEIVRDSENNMITVCFIENIDPL GVHTGDSFCSAPMLTISEECQKRLQEQAYKIVESVQVIGGTNVQFAHDPVSDRIIVIEIN PRTSRSSALASKATGFPIALVSAMLAAGLTLKDIPCGKYGTLDKYVPDGDYIVIKFARWA FEKFKGVENKLGTQMRAVGEVMSIGKTYKEAFQKAIRSLETGRYGLGYAADFNTKSKEQL LQMLITPSSERHFIMYEALRKGASVEEIHEITKVKTYFIEQMKELVEEEETLAASKGSLP SDELLVSAKKNGFSDKYLSQVLEVPEDSVRSRREELGVQEAWEGVHVSGTPDSAYYYSTY NAEDKNPVRSDRPKIMILGGGPNRIGQGIEFDYCCVHASLALKKLGFETIIVNCNPETVS TDYDTSDKLYFEPLTLEDVLSIYKKEKPLGVIAQFGGQTPLNLASELEKNGVRILGTSPS VIDLAEDRDLFREMMEKLDIPMPESGMATTVDEALAIAERIGYPVMVRPSYVLGGRGMEV VYDDESMVSYMNAAVGVTPDRPILIDRFLNHATECEADAISDGTHAFVPAVMEHIELAGV HSGDSACIIPSVHISDDNVQTIKEYTRKIAEEMHVKGLMNMQYAIENGKVYVLEANPRAS RTVPLVSKVCNIRMVPLATDIITSEITGRPSPVPGLKEQVIPYYGVKEAVFPFNMFQEVD PILGPEMRSTGEVLGLSDHYGEAFYKAQEAAQSKLPLSGTVLISVNRKDKAEVVEIAESF AADGFHIVATGTTCDLIREAGIEAEKVKKLYEGRPNILDMITNGKIQLIVNSPVGKGSVH DDSYLRKAAIKAKIPYMTTIAAARATAKGIRYVKENGNGDVRSLQQLHSEITEK >gi|224461045|gb|GG657759.1| GENE 954 990956 - 992818 1597 620 aa, chain - ## HITS:1 COG:DR0933 KEGG:ns NR:ns ## COG: DR0933 COG0366 # Protein_GI_number: 15805957 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Deinococcus radiodurans # 6 581 21 609 644 393 37.0 1e-109 MSKADDIFQRRMEKSHDELRWLYMELYGNDAMFAELTSQMYAYYRQRRIKLRNRDLKREE DPAWFKKNDMLGMMMYIDNFAGNLKGVKEKLSYLKSCNVNYLHLMPFLDSPRGRSDGGYA VSDFRKVKPDLGTMEDLADLADECHRKGISVCMDFVMNHTSEEHEWAKKARAGDGEYMSR YFFYDNYDIPRMYEATVPQVFPTTAPGNFTWLDDMGHFVLTSFYPYQWDLNYGNPRVFNE MMYNFLYLANQGMDIIRIDAVPYIWKQLGTQCRNLPQVHTIVRMMRIISEIVCPSVVLLG EVVMEPAKVAPYFGTVEKPECHMLYNVTTMATTWHSVAARDVRLLKQQMDIVNSLPKEYT FLNYLRCHDDVGWGLDYAALKQWGMEEVSHKKFLNDYFTGRIEGSRSRGELYNDDPVTKD ARFCGTTASMCGIESAGFEHAAEKMEAAIRLDIMLHAYMLTQSGIPMLYSGDEIGQVNDY SYKEDAEKWSDSRYVHRGKFCWSLVENRGDSSTVQGKIFQTLDRLEAVRRQEEAFGPDAD VYTYDVKDDAVLCILRQTKSSRFFGLFNFHDEERTAWMQEEGTYRDLMTGAVLELRDVPL PGHSFIWAKCIGDGLFLHKD >gi|224461045|gb|GG657759.1| GENE 955 992836 - 995016 1958 726 aa, chain - ## HITS:1 COG:BH2223 KEGG:ns NR:ns ## COG: BH2223 COG3345 # Protein_GI_number: 15614786 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Bacillus halodurans # 1 710 1 715 748 582 41.0 1e-166 MAIIYDDRKKTFTLNTESTTYQMQVDRYGFLLHLYYGKLAEGCMDYVLTYYDRGFSGNPY EAGKDRTYSLDALPQEFPCRGNGDFRAAALTVRNADGTYCCDMRYRSHVIVKGKYDLPGL PAVYGTEQEAQTLEITMEDSASGLQAVLLYGVLPELDIITRSVRIVNAGEKKVYIENIQS ACLDLLSGNYDVISFYGRHAMERNFQRIPVPHGSFRIGSRRGTSSHQYSPFMILADKNAT EDAGSCYAMNFVYSGGFSGEAEKDQFNQTRMMMGLQDELFSYPAAPGETFQAPEVILSYT DKGLNRLSQHMHRCIRTHVCRGKYRDAVRPVLVNSWEAAYFDFTGETIRKLAEDAKECGI DMVVMDDGWFGSRDGDFSGLGDWHVNEEKLGGTLRDLIRQINDMGIKFGIWIEPEMVNED SDLYRAHPDWVLSVPGRKPVRARYQLVLDFSRKEVVDALFEQICKILDQGNIEYVKWDMN RSLSDVYSAGTEEQGRVLYDYVLGVYDFLERLTARYPDLLIEGCSGGGGRFDAGMMYYTP QIWCSDNTDAVDRVKIQYGSSFGYPVSAVGAHVSASPNHQTGRRTPMYTRTVTAMAGTFG YELNLGALSGEEKKEIRQQTDLYRKYAPLIQNGTYYRLSNPYEDEIGAWAFVSEDRRKVL LNAVTLDVHGNMTVNYIKPKGLKEDAVYEDMSSGQRYCGAALMEAGIPLPAAACEYEAYQ IYLEEV >gi|224461045|gb|GG657759.1| GENE 956 995174 - 996073 748 299 aa, chain + ## HITS:1 COG:SP1899 KEGG:ns NR:ns ## COG: SP1899 COG2207 # Protein_GI_number: 15901726 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 20 294 2 274 286 132 27.0 1e-30 MVYMDIYYKKRKEHDLMSNLLFSVFPNENFIDLGLYQYGWEQCSPSHSFGPAARNHFVFH YVISGTGRLMADSSDGNTRTFQIKSGQGFMLFPGQVNTYVADKELPWEYTWIEFDGLRAK EMVSLAGLTKDMPVYHAASKEMCRNMMDEMLYIARHSNETPFHLIGHLYLFLDCLTRSAA SLKLRQGERIRDFYIKEALSFIEQNFQNDISVEDIAAFCGLNRSYFGKIFRDTLGKPPQE FLMSYRMAKAAELLKLTKLSVRDIGNAVGYPNQLHFSRAFKNIYGISPRDWRSQNGMSY >gi|224461045|gb|GG657759.1| GENE 957 996101 - 996928 847 275 aa, chain - ## HITS:1 COG:BS_bltR_1 KEGG:ns NR:ns ## COG: BS_bltR_1 COG0789 # Protein_GI_number: 16079711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 7 112 6 111 124 107 46.0 2e-23 MAIKKKESYLTTGEFARLTGVTKHTLFHYDAIGLLCPEVKLDNGYRYYTFSQLDIFEIIY TLKELNMPLQEIKEYVDGRTPESLLRLFKKESRIIEERMRKLRQMQRWMEEKTNCICAGI AASPEEISVRHEEKMYMVLSGIESSDEMGWSIEVGNFLDYCEEHGVRSSHGIGFRQNLSD IMAGSYDNYRTLYQLLRVKPKKVACEVRPEGEYVTAYHKGKWQDIGTAYRRLVDYATENG LKLSEHFYEDYLLDGLAVQQEEDFLTKIICMVSPD >gi|224461045|gb|GG657759.1| GENE 958 996961 - 997110 69 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMVGAAKRRREKNLKSFAMEFDIGILLSILRPDAFVRVVFLSDNCYDKV >gi|224461045|gb|GG657759.1| GENE 959 997043 - 998371 1176 442 aa, chain + ## HITS:1 COG:BH4045 KEGG:ns NR:ns ## COG: BH4045 COG0534 # Protein_GI_number: 15616607 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 1 441 3 446 447 355 48.0 7e-98 MSNSIAKDFKFFSLLRFAAPTIIMMVFMSLYTIVDGIFISRLLGTNALSSANIVYPVLNL VIAVGVMLASGGSAIIARKFGENKGQEAREDFSLLIIVGIAAGFVIMTAGNLFIEPIVRM LGATDLLLNDAVSYLGVSLFLAPACIMQLLFQTFFVTAGRPNLGLLLTIGGGLTNMVLDY VFMGPLQMGISGAALATGIGQLVPAVFGVFYFFFSKGSLHLTKPKFRGTVILESCLNGSS EMVTNISAAVVTYLFNIMMLRFLGEPGVAAITIVLYGQFLFNAMYMGFSMGVAPVISYNY GSGNQKLLRRIYRICISFICVSAVIITLFALLSSPYIVEIFTPAGTETYEIARGGFFLFS FNYLFAGINIFASAMFTAFSNGKISAIVSFVRTFVLIVANILLLPYLIGVNGIWLSVPAA ECMTVLLSVYFFYKKRKDYHYI >gi|224461045|gb|GG657759.1| GENE 960 998417 - 999562 1479 381 aa, chain - ## HITS:1 COG:BH0463 KEGG:ns NR:ns ## COG: BH0463 COG0628 # Protein_GI_number: 15613026 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus halodurans # 26 369 12 367 372 122 27.0 9e-28 MRTDIKEKLHDDRPYWKVIVSLAFSLLGTVLFIFLGVRLLAFFMPFVIGWFIAFIASPVV NWLERRLKIVKKLGSAIIIIGVLAGLVFLLYFAGSRLWREIVSLVQNMPDLYKQLESGLS DIGKTLDGVFTILPKGIQNGWHAIVSNLDSTVGDLMGRISEPTVTAAGNFAKKIPSVLIA TIVTVISAYFFIADREAVIAWSKKIAPDPVVRRMSMVIDNMKYAVGGYFKAQMKIMVVVF ALLLVGFLLMGVHFQILLALLIAFLDFLPFFGTGTALIPWALYKFMVGNYRLAIALMALY AVTQLVRQLIQPKLVGDSMGLNPLVTLVLLYVGYKVGSVLGMIFAVPVGMIVINLFQAGA FDYILDDVKILLEGIMSLRNE >gi|224461045|gb|GG657759.1| GENE 961 999566 - 1000168 731 200 aa, chain - ## HITS:1 COG:BH3049 KEGG:ns NR:ns ## COG: BH3049 COG0218 # Protein_GI_number: 15615611 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus halodurans # 19 189 19 189 194 187 52.0 8e-48 MIIRNINLETVCGITSILPDNDHPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQ TINFYNINNEMYLVDLPGYGYAKVSEKEKMKWGQLIERYLHGSGQLKAVFLLIDIRHEPS ANDRMMYDWIVDQGYEPIIIATKLDKIKRSQVDKHIKMLRTGLDLIPGTKVIPFSSMTKQ GRDEIWELVETEYLDRQEVE >gi|224461045|gb|GG657759.1| GENE 962 1000197 - 1002530 2571 777 aa, chain - ## HITS:1 COG:BS_lonA KEGG:ns NR:ns ## COG: BS_lonA COG0466 # Protein_GI_number: 16079872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Bacillus subtilis # 7 777 8 770 774 723 49.0 0 MTNEVNSLPMVALRGMVVLPGMVTHFDVSREKSIEAIEQAMQENQKIFLTAQKDIEKENP GMNDICAVGCIASIKQIVKLPKKISRILVTGETRARMDCMEYDEPYLRANVVEVADIDNA EEAVGAKENPLNMEAMLRGLKDLFREYLPRNPKLSKDLALQMEEIKDLRRLVDEIAANIP LSWENAQELLEEPDVLKRYDKVVGRLVSEIQIINIKEEIQAKVKERVDKNQREYILREEM KIIREELGDDNTMSDADEFQEAADKLKAPAEVKEKLNKEIKRFKNTMGNPAETGVVRTYI ETLLEMPWDNAGRDHKDIAYAKRVLDEDHYGLEKVKERVLEFLAVRALTKKGDTPILCLV GPPGTGKTSIAKSLARALKKPYVRISLGGVRDEAEIRGHRRTYVGAMPGRIATGLKSAGV KNPLMLLDEIDKVSNDYKGDTFSALLEVLDSEQNSKFRDHYIEVPVDLSEVLFVTTANTL QTIPRPLLDRMEVIEVSSYTENEKMHIAMEHLLPKQLRRHGLKPEQLTVSRRAVWKMARN YTKEAGVRQLERKLGEICRKAAREILETKKPAIHVTERNLHLYLGKELYTYQMANASDEV GIVRGLAWTSVGGDTLQIEVNIMPGEGEILLTGQLGDVMKESARTGISYIRSVSAAHKIE EMFFKEHDIHIHIPEGAVPKDGPSAGITMATAMISAVTERRVRADVAMTGEITLRGRVLP IGGLKEKLLAAKNAGIRTVIIPQENKVDLEDISSEIKKGMEILPVSHMDEVLKIALV >gi|224461045|gb|GG657759.1| GENE 963 1002641 - 1003900 280 419 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 157 402 258 449 466 112 33 8e-23 MAGKNDDQVRCSFCNKTQSQVRKLIAGPNGAYICDECIDVCAEIIEEEFEYDDRRHWNPF ADINLLKPEEIKDFLDEYVIGQDEAKKVLSVAVYNHYKRIMAQKDLGVELNKSNILMLGP TGCGKTLLAQTLAKILNVPFAIADATALTEAGYVGEDVENILLKIIQAADGDVERAEYGI IYIDEIDKITRKSENPSITRDVSGEGVQQALLKIVEGTVANVPPQGGRKHPHQELIQIDT TNILFICGGAFEGIEKIVENRIDKKAIGFNADITEKHENDVDRLLNQVLPQDLVKYGIIP ELVGRVPVTVALQMLDKEALMRILTEPRSALAKQYQKLLELDGVDLIFDEDALEEIAETS LKRKTGARGLRAIMENVMMDIMYRAPSDETLKTCRITKEVVKGIGEPECEHTAVRSESA >gi|224461045|gb|GG657759.1| GENE 964 1003933 - 1004514 639 193 aa, chain - ## HITS:1 COG:CAC2640 KEGG:ns NR:ns ## COG: CAC2640 COG0740 # Protein_GI_number: 15895898 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Clostridium acetobutylicum # 1 190 1 190 193 290 74.0 8e-79 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI HLYINSPGGSVSAGLAIYDTMQYIKSDIETICIGMAASMGSFLLAGGTKGKRLALPNAEI MIHQPSGGAQGQATEIQIAAEHILKTRQRLNQILAENTGQPLDVIRIDTERDNFMSAEEA KAYGLIDEVIKNR >gi|224461045|gb|GG657759.1| GENE 965 1004547 - 1005833 1655 428 aa, chain - ## HITS:1 COG:BS_tig KEGG:ns NR:ns ## COG: BS_tig COG0544 # Protein_GI_number: 16079875 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Bacillus subtilis # 1 424 1 423 424 328 50.0 1e-89 MSLQVEKLEKNMAKLTIEVPADDLEKALQSAYMKQRKKINMPGFRKGKVPRQMIEKMYGA EIFYDDAANELIPKAYSDAYEECELNIVSQPDINVVQIEKGKPFVFTAEVATKPEVTLGE YKGLEVDKVSTRVTQKEVDARIQEEAEKNARTVAVEDRPVQNGDEVILDFEGFVDGAAFE GGKGENYPLTIGSNSFIPGFEEQLVGAEAGKEVEVNVTFPEDYHAEELKGKEAVFKCTVH EIKAKELPEIDDEFAAEVSEFDTLEEYKADVKVKIKDEKAAEGKTKKEDQVVEQAVKNAE MEIPKAMIETQVRQMADDFAQRIQSQGISLEQYFQFTGMTAEKMLEEMRPQAIKRIETRL VLEAIAKAENIEISDEKVDEELAKMAESYKMEVDKLKEFMGENEKNQMKEDMAVQEAVTF LVENAVEK >gi|224461045|gb|GG657759.1| GENE 966 1005938 - 1006612 922 224 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568851|ref|ZP_03777876.1| ## NR: gi|225568851|ref|ZP_03777876.1| hypothetical protein CLOHYLEM_04930 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04930 [Clostridium hylemonae DSM 15053] # 4 224 13 233 233 399 100.0 1e-110 MKKHLRPALLVILCIMLAAGSAGCGRDFDASGYVKGVLDLNFQGQTQKAQEMIEGSTTEA LKAQYKEFIDTFVANNITNEIDMGDLKTSQFAELVSKIFSVMRYSVGEADKTGKKEFEVP VEIQPSDVFIRFQQLLTEDSIKIAQDVKDGVYKGTDDEVRQQILNDIVNHAYELLDVASS EMEFQDAKTVIVKVNADKRNEYSIDEDDMDNLVIKILRLDEIQG >gi|224461045|gb|GG657759.1| GENE 967 1006632 - 1007180 805 182 aa, chain - ## HITS:1 COG:SP0804 KEGG:ns NR:ns ## COG: SP0804 COG0693 # Protein_GI_number: 15900697 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Streptococcus pneumoniae TIGR4 # 1 168 1 165 184 141 46.0 5e-34 MKRVSVILADGFEEIEALTVVDLLRRAKIYVDTVSAAEEYVVHGAHGINVQTEDLFDEVN FVEFDMIVLPGGMPGTRNLEEHNGVRRVVKDFIEEGKTVAAICAAPTILGNLGLLKGRRV TCYPTMETKIQGAVLTGAPVTVDGNIITGRGAGTAIDFSLKIIEQLMGKDKAKEIAESIV YE >gi|224461045|gb|GG657759.1| GENE 968 1007345 - 1007788 492 147 aa, chain + ## HITS:1 COG:NMA2178 KEGG:ns NR:ns ## COG: NMA2178 COG2954 # Protein_GI_number: 15795049 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 146 3 148 158 65 33.0 3e-11 MEIERKYLVSRLPGDLDGYPCRMIEQGYLNTAPVVRIRRDNEKYELTYKSEGHMVREEYN LPLTEEAYEHLLTKIDGRIITKKRYMIPYDDSLTIELDIFEGSLAPLRLAEVEFPDEASA SAFTPPDWFGEDVTFSGSYHNSALSRL >gi|224461045|gb|GG657759.1| GENE 969 1007899 - 1008315 379 138 aa, chain + ## HITS:1 COG:no KEGG:Ccel_1565 NR:ns ## KEGG: Ccel_1565 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.cellulolyticum # Pathway: not_defined # 4 65 1 62 75 65 50.0 8e-10 MPNIQLANNLRYLRKQNKLTQKDLSEMLNISRQAYSNYETSKRTPDLDSLLYLAGFYNVN LDSLVLGSLPSPDQADAAASESIAEQKIPYTLSVDKNTGNSIYLTEEELEIITKIRTLSR ENKQIITGFINDNAAPDV >gi|224461045|gb|GG657759.1| GENE 970 1008312 - 1009520 1439 402 aa, chain - ## HITS:1 COG:Cj0582 KEGG:ns NR:ns ## COG: Cj0582 COG0527 # Protein_GI_number: 15791942 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Campylobacter jejuni # 1 401 1 399 400 344 48.0 2e-94 MLVVKKFGGSSVANKDRIFNVAQRCIEDYKAGNDVVVVLSAMGDTTDDLIGMAESINPNA KKRELDMLLTTGEQVSVSLMAMAMQALDVPAVSLNAFQVMMHSTSRYGNARFKRVDTERI LHELDSRKIVIVTGFQGVNKYDDITTLGRGGSDTTAVALAAVLHADKCEIYTDVDGVYTA DPRIVKNARKLEVVTYDEMLELASLGAKVLHNRSVEMAKKYNVELVVRSSLNRSEGTVVK EASHMEKMLVTGVAADKNTARISVIGVQDKPGIAFNIFDTLAKNNINVDIILQSVGREGT KDISFTVADNDLENAIKVLEANKDRLTIQQITWEEEVAKLSIVGAGMMSNPGVAAKMFES LYNSRININMISTSEIRITVLVDEKDIEQAMIAVHDGFAVND >gi|224461045|gb|GG657759.1| GENE 971 1009543 - 1010754 1262 403 aa, chain - ## HITS:1 COG:MA0132 KEGG:ns NR:ns ## COG: MA0132 COG3635 # Protein_GI_number: 20089031 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted phosphoglycerate mutase, AP superfamily # Organism: Methanosarcina acetivorans str.C2A # 1 398 1 395 397 360 47.0 2e-99 MKYIIVLSDGMAGRPLKELGGRTTLEAARTPVMDRLAQKAEVGMVSMVPEGMAPGSDTAN LAVMGYDPDIYYTGRSPLEALSIGVDMEDTDVSFRCNIVTLSEEDCAYEERTIIDHSSDE ISTEDAAVLLDALREGLEREGYRFYTGTSYRHLLIMKQGKETELTPPHDILTKRIGAYLP EDAVLREMMKKSYDILENHPVNAERRRKGLHPANSAWFWGAGRRPALKSFEEMTGLRGVM ISAVDLLKGIAVGAGMDCIEVEGANGGLNTNYTGKAMAAVNALTKDGYDFAYIHVEAPDE MGHQGSLKDKITAIERVDELVAGKITEGMERAGADYRILVLPDHPTPIEVRTHTGDPVPY LLYDSTAPYEGTDAYDEKTASETGIYWPDGYKLIGHLLGRARS >gi|224461045|gb|GG657759.1| GENE 972 1010773 - 1011993 1484 406 aa, chain - ## HITS:1 COG:BH3422 KEGG:ns NR:ns ## COG: BH3422 COG0460 # Protein_GI_number: 15615984 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Bacillus halodurans # 1 346 4 355 431 275 42.0 1e-73 MVNIAVMGYGTVGSGVVEVVRTNGARINQRIGDELNIKYVLDLKEFPGDPVQDKIVHDFE TIIDDDDIKIVVEVMGGIEPAYTFVKRCLQAGKSVATSNKALVAKHGAELLSIAKDQGIN FLFEASVGGGIPIIRPLNSSLTADEIEEITGILNGTTNYMMTKMFYEGADYDEVLKEAQA NGFAERNPEADVEGYDACRKIAILSSLISGQQVDFEDIYCEGITKITAEDMKYAKAMGTT IKLLASSKRRGNRLHAIVAPCMLYPGHPLYNVNGVFNAIFVHGNVLGDAMFYGSGAGKLP TASAVVADVVDAAKHLNRNIMTMWKQDKLKLEDKADAKRRFFIRMKGDAQEMLADLRDSF GDIEIVHADGLDGEFGFITPVMMEGDYDTRAGIYKDEILHMIRIQE >gi|224461045|gb|GG657759.1| GENE 973 1012006 - 1012944 959 312 aa, chain - ## HITS:1 COG:BS_prfB KEGG:ns NR:ns ## COG: BS_prfB COG1186 # Protein_GI_number: 16080582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Bacillus subtilis # 1 307 56 362 366 347 56.0 2e-95 MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEMEAEIQSFEEQFEALRIR TLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDGDITGI KTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD EELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQMLKVKLQ LLKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVLDGGIDM FINAYLKYSAGS >gi|224461045|gb|GG657759.1| GENE 974 1013036 - 1013113 137 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVELDAFKSIMNAYEEPLAEMRDSL >gi|224461045|gb|GG657759.1| GENE 975 1013134 - 1015698 3033 854 aa, chain - ## HITS:1 COG:CAC2846 KEGG:ns NR:ns ## COG: CAC2846 COG0653 # Protein_GI_number: 15896101 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Clostridium acetobutylicum # 1 854 1 838 839 944 59.0 0 MGLIQKIFGTHSENELKRIYPIADAVEALEPEIQKLSDGELRDKTREFKERLKEGKTLDD ILPEAFAVVREAAVRTLGMKHYRVQIIGGIILHQGRIAEMKTGEGKTLVSTLPAYLNALT GEGVHIVTVNDYLAKRDAEWMGQVHEFLGLKVGVVLNSMDNDERREAYNCDITYVTNNEL GFDYLRDNMVIYKEQLVQRGLKFAIIDEVDSVLIDEARTPLIISGQSGKSTKLYEACDIL ARQLERGEASGEFSKMNAIMGEDIEETGDFIVNEKEKNINLTEDGVKKVEKFFHIENLAD PDNLEIQHNIILALRAHNLMFRDQDYVVKDDQVLIVDEFTGRIMPGRRYSDGLHQAIEAK EHVKVKRESKTLATITFQNLFNKFDKKSGMTGTALTEEKEFRDIYGMDVVEIPTNVAVQR IDLEDAVYKTQKEKFRAVCDEIEEAHAKHQPVLVGTITIETSELLSSMLKKRGIPHNVLN AKYHEQEAEIVAQAGIHDAVTIATNMAGRGTDIKLDDEARAAGGLKIIGTERHEARRIDN QLRGRSGRQGDPGESRFYISLEDDLMRLFGSERLMNVFTTLGVEDGEQIEHKMLSNAIEK AQQKIESNNFGIRKNLLEYDQVMNEQREIIYEERRRVLDGENMRDSIFHMINDYVENVVD MIVSPDDEPEDWNLQELNMTIHNVVPMEAVTEEDVKDISQKELKHLLKERAVKSYELKET EFPEPEHLREIERVVLLKVIDAKWMDHIDDMDQLRQGIGLQAYGQRDPKVEYKMLGYDMF GAMTKSITEDTIRTLFHVRIEQKVEREQVAKVTGTNKDESAAHEPKRRAEKKVYPNDPCP CGSGKKYKQCCGRK >gi|224461045|gb|GG657759.1| GENE 976 1015808 - 1016527 909 239 aa, chain - ## HITS:1 COG:SPAC3F10.09 KEGG:ns NR:ns ## COG: SPAC3F10.09 COG0106 # Protein_GI_number: 19114853 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Schizosaccharomyces pombe # 1 235 24 250 264 206 45.0 4e-53 MGGSLTDKEDRAVENFSAARHADYYAGLYKKDGLAGGHVILLNPASSDYFEATRQQAVSA LGAYPGGLQIGGGISAANAEEYIGLGASHVIVTSYVFKDGRIRWDRLGELKRAVGKEHVV IDLSCRRKDGAYYIVTDRWQKFTDVELNPHILDEIAAYCGEFLVHGVDVEGRASGMEEGL VRMLGGWGGIPVTYAGGIGSLEDLEHFREVSGGSVDFTIGSALDLFGGKVPYDTVKRYK >gi|224461045|gb|GG657759.1| GENE 977 1016588 - 1017820 1432 410 aa, chain - ## HITS:1 COG:MA1725 KEGG:ns NR:ns ## COG: MA1725 COG1541 # Protein_GI_number: 20090577 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Methanosarcina acetivorans str.C2A # 24 409 43 433 435 499 62.0 1e-141 MQMTELQFKLIKENLRLLTSKPCFYKEKLTGIDIESIQSQEDFEKLPFTWKGDLREAYPL GLQAVPDEEIVRIHSSSGTTGTPIIIPYTQKDVDDWAKMFARCYEMAGITALDRIHITPG YGLWTAGIGFQLGAELLGAMAVPMGPGNTDKQLRMMRDLQSTVLCATSSYALLLAEEIAK RDMTDKIYLKKGVIGSERWGAKMRKRIADELGVKLYDIYGLTEVYGPGIAMSCDCECGMH YWDDYVYFEIVDPKTGENVPDGEIGELVVTTLRKQGAPLIRYRTHDLTRFIPGSCPCGSK YPRIDTLIGRTDDMVKVKGVNIFPSQIEDMLKGVKEASSEYQFMLDHMNGKDVCTLFVEV NKGVELKEAAKVIQKEFKEKIGITTNVKPVAIGDLPRSEKKSTRIFDNRY >gi|224461045|gb|GG657759.1| GENE 978 1017866 - 1018450 654 194 aa, chain - ## HITS:1 COG:PH0764 KEGG:ns NR:ns ## COG: PH0764 COG1014 # Protein_GI_number: 14590633 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Pyrococcus horikoshii # 4 193 5 196 202 142 38.0 5e-34 MNKNCLLCGVGGQGVVLASKLIAYAAMNKGLDVRTTETIGMAQRGGSVVSHVRMGKKIHS PLIPHGSADVILAFEPAEAVRNLPYLRNGGLVIVNKKAVKPVTATLSGNDYDGGGMLQYL KEHAGQLCIVDGEKLCEEAGSAKALNVALLGVAAKSGALDITLPDIESELRKHIRPQFVD INMKALSLGAEAAC >gi|224461045|gb|GG657759.1| GENE 979 1018452 - 1020257 1795 601 aa, chain - ## HITS:1 COG:MA1727 KEGG:ns NR:ns ## COG: MA1727 COG4231 # Protein_GI_number: 20090579 # Func_class: C Energy production and conversion # Function: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits # Organism: Methanosarcina acetivorans str.C2A # 3 599 4 614 619 577 51.0 1e-164 MAKELLMGNEAIGLGAIRAGVNLVSGYPGTPSTEILETVAKHNSGGRIHVEWSVNEKAAL EVAAGAAYAGARTLVTMKQVGLNVASDPLMSLAYVGVKGGMVIVAADDPGPISSQTEQDT RCFAAFAKIPVFDPVSPEEAYEMVGDAFAYSQQYGTPVLLRPTTRVCHGCAAVELAEAAD ENVPEGFVKDTGRWVIFPRLSYENHRKIEKRNEELSRLFSSCKYNAAEGKGTLKKAVAAG GVSYAYVKESLPEDVKLLKIGTPHPFPEALAEEFLRGLEEVLVIEELDPVIEKELLRIAG KYHLPVTIKGKLTHDTKNAGENSVESVRDDLRRFLPDHEELRAGNADAAAEMPPLPVRPP VLCAGCPHRASFYAVKKAAHGRKAVFSGDIGCYTLGNSKPLDMVDTCLCMGADVTIAQGL HIIEPDAVNFAFIGDSTFFASGMTGVVNAVYNQTDIVLVVLDNSTTAMTGHQPHPGTGTT MMGETVAKADIGKILEAVGVRKIVKADPLKLGEAVAAVEEVIDEKGVRAVIFKSPCIAVT KPTSLYRVAEDACTSCRQCIRELGCPAIVNADGKAAIEPSLCFGCGICAQVCKFGAIQEV E >gi|224461045|gb|GG657759.1| GENE 980 1020457 - 1020810 552 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568864|ref|ZP_03777889.1| ## NR: gi|225568864|ref|ZP_03777889.1| hypothetical protein CLOHYLEM_04943 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04943 [Clostridium hylemonae DSM 15053] # 1 117 1 117 117 100 100.0 3e-20 MKQFKKLLVLLMCTGVIMGVTACGSDKDAADNGATNNTTTGNNTGEANDTNTNDATDGTR DEGVADEIGDDVKDGMDDIADDLDGDNNRDKNATDKNANDKDVKGGTTDNTTKNSNK >gi|224461045|gb|GG657759.1| GENE 981 1020917 - 1022869 2115 650 aa, chain - ## HITS:1 COG:CAC1572 KEGG:ns NR:ns ## COG: CAC1572 COG3855 # Protein_GI_number: 15894850 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 7 648 17 661 665 769 58.0 0 MKELEERYLERLSELYPTIAKASTEIINLQAILNLPKGTEHFLTDIHGEYEAFSHVLKNG SGSVRRKIDDVFGNTMSSRDKQSFATLIYYPAEKMERVKKEESNMEDWYRITLYRLIEVC KRAASKYTRSKVRKALPRDFAYVIEELITEKAEVTDKESYYNAIVNTIIRTGRAEKFIVA MSELIQRLTVDHLHIVGDIYDRGPGPHVIMEKLMEHHSVDIQWGNHDVLWMGAAAGQRGC IANVIRICARYGNLDILEDGYGINLLPLATFALNTYEDDACGCFKLKGEPNYNPNEMLMD IKMHKAISIIQFKVEGQIIKKNPGFKMEDRNLLHHIDYERGTIEIDGKEYELLDRNFPTV DPKHPYVLTKEEEDIMERLEQAFLHCEKLQRHMRFLLNKGSLYKVYNNNLLYHGCVPLKE DGALKPVRLFGRSYKGRSLYEVLESYVRKGFYALDEKEKERGKDIMWYIWLHENSPLFGK DKMATFERYFLADKETHREKKNPYYSMLQDEKVVNRILAEFGLPPEGTHIINGHVPVKSK DGENPVKCQGKVLVIDGGFSRAYQKETGIAGYTLIYNSYGLILAAHEPFESTDAAIEKES DIHSDSTIVKRVVQRKLVGDTDVGKELKEQIADLEVLLAAYRSGRIAERM >gi|224461045|gb|GG657759.1| GENE 982 1022892 - 1023650 942 252 aa, chain - ## HITS:1 COG:CAC2379 KEGG:ns NR:ns ## COG: CAC2379 COG0289 # Protein_GI_number: 15895645 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Clostridium acetobutylicum # 1 250 1 248 250 240 45.0 2e-63 MVRAIMHGCNGRMGQVITGLINEDEGIEIVAGIDAYTGRENAYPVFECIDKCDVEADVVI DFSNAAAVDALLGYCAKQKLPVVLCTTGLSEEQLERVEKASEKTAVLRSANMSLGINLLL KLVKDAARVLAGAGFDVELVERHHNQKVDAPSGTAVALADSINEAMDDAYTYVYDRSQVR EKRDKKELGISAVRGGTIVGEHEIIFAGADEVVEFKHTAYSKAIFGKGAVEAAKYLAGKP AGRYDMSDVIVF >gi|224461045|gb|GG657759.1| GENE 983 1023789 - 1024682 927 297 aa, chain - ## HITS:1 COG:CAC2378 KEGG:ns NR:ns ## COG: CAC2378 COG0329 # Protein_GI_number: 15895644 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Clostridium acetobutylicum # 1 294 1 291 293 306 51.0 4e-83 MAIFKGAGVAIVTPFNEDGSINYDRLDELIDYHCNNGTDSIIICGTTGESATMTEEEHLE CVKFAIERTKGRIPVIAGTGSNCTRTAVDMSKDAACYGADGLLLVTPYYNKATQAGLIAH YKAVAEAVSGTPIIMYSVASRTGCNIEPATVAALVKETENIVGIKEASGNISQIAKIMSM TDGRIDLYSGNDDQIVPLMSLGGIGVISVLSNIAPQQTHDICGKFFSGDIQESAKLQLKA IPLVNELFCEVNPIPVKRAMKLMGMDCGPVRMPLTELTPEHEKTLAQAMKDYGIKVV >gi|224461045|gb|GG657759.1| GENE 984 1024789 - 1025418 772 209 aa, chain - ## HITS:1 COG:CAC2382 KEGG:ns NR:ns ## COG: CAC2382 COG0629 # Protein_GI_number: 15895648 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Clostridium acetobutylicum # 3 209 2 206 229 211 50.0 7e-55 MSDKIIENNQVTIMGEVAGDFSFSHEVFGEGFYMVDVLVKRLSNSEDRIPLMISERLIDV TQDYTGEFIMASGQFRSYNRHDEQKNRLVLSVFVREVSFIEEELDGAKTNSIFLDGYICK LPVYRKTPLGREIADLLLAVNRPYGKSDYIPCICWGRNARFASTFEVGEHVQINGRIQSR EYVKKLTETETQKRIAYEVSVSKLECVDE >gi|224461045|gb|GG657759.1| GENE 985 1025503 - 1026240 740 245 aa, chain - ## HITS:1 COG:MTH526 KEGG:ns NR:ns ## COG: MTH526 COG2043 # Protein_GI_number: 15678554 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in archaea # Organism: Methanothermobacter thermautotrophicus # 25 228 13 212 228 97 28.0 3e-20 MPFKSEKLTYGLPQDAYERDKMKALADDLKEAAGLKKQLVGVQFFFEKEDYDACEVPEIK GGAPYCVMVQKASRGMEFKSRLANHKCDGGTTALALEKSTDRIESGTEYFSYNLYDSPAA ARRLRNSIKSLHAYQPLTYGIVVRPFVSCTMQPDVIIAIVNAYQAMRMIQGYEYDSGIKP KIDMGAMQGMCSEVTAVPYITGEMNVSVLCPSTRMLCRWEDSDMAVGIPFHQFESIVKGI MATKY >gi|224461045|gb|GG657759.1| GENE 986 1026255 - 1027061 913 268 aa, chain - ## HITS:1 COG:BS_ykoC KEGG:ns NR:ns ## COG: BS_ykoC COG0619 # Protein_GI_number: 16078386 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Bacillus subtilis # 11 265 5 252 254 127 35.0 2e-29 MFTYEWRDSFLHRRNPLIKLCLIVIVTILISLSLYPVLPLCTFLMALLLGCIGGKIPPGI ILRKMRVFLGIGIAFIAFMLIMKGIDGGGDAWHIWIFHWSSSDLISILSLGMRIISISLM SLLFVLTTDPNDLVLSLILQMGLSPVHGYAALAAYRFLPTLQSEIESIRLAQEIRGIEWD RGLINRLSTPFRIMLPLLCSAARRGERVAAAMESRGLGAGRARSYYRQTKVERADWLFAA GTCLVYIVLTAVLIYIGMFRFSFGFNLK >gi|224461045|gb|GG657759.1| GENE 987 1027064 - 1028854 1806 596 aa, chain - ## HITS:1 COG:BS_ykoD KEGG:ns NR:ns ## COG: BS_ykoD COG1122 # Protein_GI_number: 16078387 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Bacillus subtilis # 8 516 6 481 490 328 38.0 1e-89 MEQMVHKKIVEMENVSFVYDGEELPVWQGLNCYFEEGTVNLLLGPSGCGKSTLLYMLNGI IPNFYEGKAEGHIWFKGEDILTKRTKDMVRHMGMVFQNPETQFCTFTVEDEIAFGLENEN TPQEEMDRRIDEALGMVGMRALRSTLLTSLSGGQKQKIAIASVLAMQPEILILDEPTANL DAASRSEVFSLLGQLVGRYGKTIILVEHNLEHLLDKAGHVIVMDGGNKVCLEGSAPSVIR SLVYDENYRGLNIFLPEKYLIMKEWINALDHIPQVRNFQKQQLLCGEGDILPVRRFAELL RELAVFPPADRSAAVSARARENVVEANSLAYAYGGQADKVLKSVDVEIGREEFVAVVGAN GAGKSTFLKVLFRVLSPYGGSVKADGRELDCCDKKRLYRDFGLVFQNPEDQFVTNNVFDE LMFSLKKNGMDETEKKKRAAGMLERFHLSSEKNKSPFLLSQGQKRRLSVAAMLLTGQKVL ILDEPTYGQDFDNQRELMELMLELNREGVTIIVVTHDMTLVADYAKKVVVLADGQTEFCG APEDIFRDADAVRKGKLEVPSVWRFSEELHKYAEEVPLFVSRKQMTDYLIRCVKEA >gi|224461045|gb|GG657759.1| GENE 988 1028860 - 1029420 797 186 aa, chain - ## HITS:1 COG:BS_ykoE KEGG:ns NR:ns ## COG: BS_ykoE COG4721 # Protein_GI_number: 16078388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 5 180 4 179 199 77 27.0 1e-14 MELKWKTKEVVVVAMVAAVIGVVYTIMDYLYMPLSSLLGPVFMELTFGIYLLSASLPMYI VRKPGFALFGALVTAFVNLLLGSAYGIQLILAGTLQAVGMEIGYAVCKRYGGNMANMTVG AVLGALCVLGRDCVVFGYLTLGAKTFTGIVIVRLISAVVIGIILTKGITAGLKKTGVLRG FKCAQV >gi|224461045|gb|GG657759.1| GENE 989 1029631 - 1031454 2383 607 aa, chain + ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 2 604 3 602 605 732 63.0 0 MKTKREDIRNIAIIAHVDHGKTTLVDELLKQSGVFRENQDVEERVMDSNDIERERGITIL SKNTAVYYKGTKINIIDTPGHADFGGEVERVLKMVNGVVLVVDAFEGAMPQTKFVLRKAL ELKLPVIVCINKIDRPEARPEEVIDEVLELFIDLDADDEQLDCPFVYASAKAGYALVELD DSPQNMLPLFETILDYIPAPEGDPDADTQVLISTIDYNEYVGRIGVGKVDNGTIRVNQDM VVVNAHDPERKDKVRISKLYEFDGLNKVDVKEATIGSIVAISGISNISIGDTLCSPENPE AILFQKISEPTIAMQFIVNDSPFAGQEGKFVTSRHLRDRLYKELNTDVSLRVEESDSTDS FKVSGRGELHLSVLIENMRREGYEFAVSKAEVLYKKDEHGKLLEPMEAAYIDVPDEFTGV VIEKLGQRKGELRGMGTSNGGYTRMEFSIPARGLIGYRGEFLTDTKGNGILNTSFDGYAP YKGDIQYRKQGSLIAFETGESVTYGLFSAQERGTLFIGPGEKVYSGMVIGQNGKAEDIEL NVCKMKHLTNTRSSGADEALRLTSPKVLSLEEALDFIDTDELLEVTPENLRIRKKILDPK MRKRGIK >gi|224461045|gb|GG657759.1| GENE 990 1031454 - 1032347 747 297 aa, chain + ## HITS:1 COG:CAC0605 KEGG:ns NR:ns ## COG: CAC0605 COG0671 # Protein_GI_number: 15893894 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Clostridium acetobutylicum # 1 293 12 286 290 92 26.0 1e-18 MAFLSLLEGIRTPFLDRLMQFITYFGQEIVIIAVICALYWCADKRFAYMLGFTYFTAGLL VQSLKITFRVPRPWVIDPSFKAVESAVPGATGYSFPSGHTQGAACLFFPLALRTKNTWRK LLCVLAFILIGFSRMYLGVHTPKDVIVSMLLSVAVSCMIWHFQRFFLDSTQYVKQTAAVL AALSLAVAAYALLLKSRGTIDMEYALDCCKAAGAGLGFSLGYYIERTRLDFDTHTGQFGS QAVKLIAGLGLTLLIKEGFPLIFGASIIAKMAEYFVLVLWVLVLYPCIFTRLGRRHS >gi|224461045|gb|GG657759.1| GENE 991 1032478 - 1033089 633 203 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1210 NR:ns ## KEGG: EUBREC_1210 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 202 2 202 202 145 39.0 8e-34 MKHYVAKFLKRLAVTLEFFISLMLALGIILLCLRMAVSMIHIPNLDVWPNYNDLLETCFN LIIGVELIRMMYYHTPNTVFEVLLFAIARQIIIDHSSVWSSLIGVCAIAVLFATRKYLFC EFDVADEIIFRASTRVKTVNKILGISIPHEQNETLLSVIEQKFLEYKIETGVGACVYFSD FGLRVAKMHEGKISRIEVIRSIH >gi|224461045|gb|GG657759.1| GENE 992 1033193 - 1033729 487 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|28210085|ref|NP_781029.1| SSU ribosomal protein S30P [Clostridium tetani E88] # 1 177 1 176 176 192 56 8e-47 MKFIISGKNIDVTPGLRETVEHKLGKLEKYFTSDTEIIVTLSVEKERQKIEVTIPVKGNI IRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLVARHQEGGNFRQEFFESEYATEDDDEVK IVRTKRFGIKPMYPEDACIQMDLLGHDFFVFCNADTDEVNVVYRRKNGTFGLIEPEFQ >gi|224461045|gb|GG657759.1| GENE 993 1033820 - 1034476 643 218 aa, chain - ## HITS:1 COG:BS_yvyE KEGG:ns NR:ns ## COG: BS_yvyE COG1739 # Protein_GI_number: 16080604 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 202 1 202 217 175 47.0 5e-44 MTKEYRTVYEGGEGEVVEKKSRFIASVRPVSTEEEALAFIETIRKKHWNASHNCFAYVIG ERSELARYSDDGEPGGTAGKPMLDVLKGEALCNTAVVVTRYFGGTLLGTGGLVRAYSQAV KEGLASSVIITKIRGVKLKIATDYTGLGKIQYILGQNGLKILESEYTDKVEIHVLVPGEE LEAVCSEITEGTNGQASLEAGESCWFAQIGGQPAVLEG >gi|224461045|gb|GG657759.1| GENE 994 1034631 - 1037165 2559 844 aa, chain + ## HITS:1 COG:CAC2301 KEGG:ns NR:ns ## COG: CAC2301 COG0744 # Protein_GI_number: 15895568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Clostridium acetobutylicum # 35 736 39 683 809 311 33.0 4e-84 MNYGKKKASQKQKKITSKSTMQGKRVGVRLFKAFLLCLLVVAVVGVIGGGLFLKKILDNT PDVSPADVQPKGFTTMVYADDDKTEIERFVASGANRIYKKIDEVPKDLQHAFVAIEDERF YNHNGIDLQGIARAAVVGLTSGNFSEGASTITQQLIKNNVFPNFTEEKTFFDRLERKVQE QYLAVAIEKQMDKDTILESYMNTINLGQNCLGVQSAAKRYFNKDVSELTLSESAVIAGIT QNPSDYNPITNPELNAKRRDKVLKNMLDQGYIDQAAYDEAKADDVYSRIQTVNNSETDDT PYSYFVDALADQVTQDLIDQLGYTETQAYNAVYSGGLSIYSTQNLDMQKICDEEMNNDSN YPGLKEYGLDYALTVTRADGTVENYSSGHIKQYVKETYGKEQGLLYSSEDEARAMVEEWK ATIAKEGDTYDEYINISPQPQASVTVMDQYTGQIKAMVGGRGAKTTSRSLNRAYKGSPRQ PGSTFKILAGYAPALDSAGQTLATIIKDEPYTYRDGTPLKNASATHRGDITMREAIQWSV NVCAVKTIEAITPKLGYEYCTEKFGITSLDPQNDVYDTLVLGGLSKGVYNYQLCAAYASI ANGGVYNTPTLYTKILDHDGNVLLEGAGESHTALKDSTAALLTSAMETVVESGTGTACRL DNMPVAGKTGTTDSNKDLWFCGFTPYYTCAVWGGYDDGKVNGYDLNFRFRIWRGIMSRIH ANLEYKDFEMPNSIEKKTVCTRTGKLAAPGCPTITEYFAKDTAPTESCPGHVDTTPKEDD TDDKDTTDNPDANTQTPTDPNQGGGTQEPTPTPTPPTDPEPTPPVDPPVDPNPPVVDPST PSTP >gi|224461045|gb|GG657759.1| GENE 995 1037271 - 1038203 650 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 2 309 3 318 319 254 42 1e-65 MQYCFGVDIGGTTVKMGLFRTEGTLVEKWEIKTRTENRGEAILPDVAASLKSKMEEKEIG HLQIAGIGIGIPAPVDDRGIVQNTANLGWGYKEVKREMGELTGLKVKAGNDANVAALGEM WLGAGKGQKNMIMVTLGTGVGGGVIVNGCPIVGENGAGGEIGHICVNYEEDETCGCGSRG CLEQYTSATGITRLARRRLEKNSSDTVLKKENLSAKAVFDALKEGDKAAEEIVEEFGTYL GHAMANMAAITDPAVIVIGGGVSKAGDILLKYVEKHFKERAFFANKETKFVLAELGNDAG ICGAAKLIIG >gi|224461045|gb|GG657759.1| GENE 996 1038218 - 1039144 949 308 aa, chain - ## HITS:1 COG:lin2626 KEGG:ns NR:ns ## COG: lin2626 COG1493 # Protein_GI_number: 16801688 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Listeria innocua # 1 297 1 296 312 271 44.0 2e-72 MGKKVKMKKIVEKMNLRNLTPDVDLTEREVEVPDINRPALQLTGFFEHFDSDRVQIIGYV EYTFLETLDEETKEHIYDTLLSYQIPCIIFSRDLVPEQRLLEKANAAQVPIFSTEKKTSE FTAEIIRWLNVELAPCISIHGVLVDVYGVGVLIMGESGIGKSESALELIKRGHRLVSDDV VEIHKVSDETLVGTAPDITRHFIELRGIGIVDVKTLFGVQSVRETQNIDLVITLEDWNKE KEYDRLGMEEEYTEFLGNKVVCHQLPIRPGRNLAIIVETAAINHRQKKMGYNAAHELYKR VQQNLTKK >gi|224461045|gb|GG657759.1| GENE 997 1039224 - 1041062 1857 612 aa, chain - ## HITS:1 COG:CAC0508 KEGG:ns NR:ns ## COG: CAC0508 COG0322 # Protein_GI_number: 15893799 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 1 611 1 617 623 615 49.0 1e-175 MFDIQEELKKLPGKPGVYIMHDEKDDIIYVGKAISLKNRVRQYFQMSRSKGVKIDQMVTH IARFEYIVTDSELEALVLECNLIKEHRPKYNTMLMDDKSYPFIKVTVDEPFPRIMLARKM VKDKAKYFGPYTSAGAVKDTIELIRKLYNIRSCSRKLPRDIGRERPCLNYHIHQCKAPCQ GYISQEDYRKSIDEVLRFLNGNYDLILKELEEKMQCASEAMEFEKAIEYRELLNSVQKIA QKQKITDTAGDDRDILAVATEEEDAVVQVFFIRGGRLIGRDHFYLRITKGESEAEILSSF IKQFYAGTPYIPSQLMLQEEIEDLEVVEEWLTRRRGHKVHLRVPKKGAKEKLVELAQKNA ALVLSTDKERLKREEGRTIGAVKELEKLLGLKGIVRMEAYDISNTNGFASVGSMIVYEKG KPKRNDYRKFKIKGVQGADDYASMEEVLTRRFVHGMKEMEEGKDMGSFTAFPDLILMDGG KGQVNVAVQVLDRLRLNIPVCGMVKDDNHRTRGLFYQNEEIPIEKDSEGFKLITRIQDEA HRFAITFHRKLRSQGQVHSVLDDIPGVGPARRKDLMSHFSNLDAIKNATVEELGRLPSMN EKSARDVYNFFH >gi|224461045|gb|GG657759.1| GENE 998 1041185 - 1042861 1682 558 aa, chain - ## HITS:1 COG:BH2903 KEGG:ns NR:ns ## COG: BH2903 COG0366 # Protein_GI_number: 15615466 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus halodurans # 1 553 1 553 561 685 60.0 0 MEKTWWKQSVVYQIYPRSFNDSDGDGIGDINGITEKLDYLKELGIDVIWLSPVYESPNDD NGYDISDYQAIMQEFGTMEDFERMLSQAHERGIRIVMDLVVNHTSDEHRWFVESRRSKHN PFRDYYIWREGKDGKEPNNWGSCFSGPAWSYDESTHMYYLHLFSSKQPDLNWDNPEVRDK VYEMMDWWCRKGIDGFRMDVISMISKAEGLPDGPKGESQLYGDPSPHAQNGPHVHEYLQE MNRRVLSHYDLMTVGECAGVTVEEAQKYASLDGKELNMVFQFEHMGLDEGEGYKWSDRKV SLPQLKAVMSKWQTELYQKAWNSLYWCNHDQPRIVSRFGDDRPAYRELSAKMLATCLHMM QGTPYIYQGEELGMTNAPFETLEDFRDIESINAYHEFVQSGIVDASAMMRYIRYKGRDNA RTPMQWDDGVNAGFSAGTPWIMVNPNYKEINAEEQLSREDSVFRYYQKLIRLRKKEEIIV SGTYELLLPDSEELYVYTRTSERHKLLVVCSFTEDAVPFALPAEFKEADAEVLISNYNRD SIDKNITLKPYEAFGLKI >gi|224461045|gb|GG657759.1| GENE 999 1043048 - 1044067 776 339 aa, chain + ## HITS:1 COG:BS_degA KEGG:ns NR:ns ## COG: BS_degA COG1609 # Protein_GI_number: 16078147 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 336 1 333 337 107 25.0 4e-23 MTVRIKDIAREANVSPTTVSNVIHGNTKKVSPATLERIEAILHKRQYIPSMGARMLAGNS SHLIGVLIGSKRRQERGIDRDPFTSILLETLETEIFRQGYYMLFHISDRPEENWALAATW NIEGLITIGLSPEENEGIREKCGIPLVTVDVYYDIPGMANIGLKDEEGGYLMAQFLFDQG HTDFLFLADNDTGVDHMRWEGIVTFLKEQGSSEGALRERHLLIPSDIDGRQAYYQKKLPL FLEKQALFFASDYYAAEAVQYLRQNNIRIPEQISIAGFDDNVYASMCSPPLTTIRQNVPQ KAAAAVRKLAALIRGETGIQLEERFPVELIIRDSVALRR >gi|224461045|gb|GG657759.1| GENE 1000 1044135 - 1046126 1252 663 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 19 625 2 606 636 486 44 1e-135 MDNQNNQNKNNQGPNNKNNRQGFSFIILVTLITAILVLALYQFQGSAGSQEISYDQFLKY VDDKEVEEVIISSDRITITMKKEKDARTSKQYYTGVVRDDTLAERLDKAGVKFGQEIPDT TSAVILNVLLTLLPIALIVGMFVWMTKRMSKGGGMMGIGKSNAKMYVEKETGITFKDVAG QDEAKESLQEVVDFLHNPGKYTQIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSL TGSSFVEMYVGVGASRVRDLFKQAQQMAPCIIFIDEIDAIGKSRDNQLGSNDEREQTLNQ LLSEMDGFDMNNGLVLLAATNRPEILDPALLRPGRFDRRIIVEKPDLKGRVDVLKVHSKD VRMDETVDLEAIALATSGAVGSDLANMINEAAINAVKNGRSAVTQGDLFEAVEVVLVGKE KKDRIMSTEERKIVSYHEVGHALVSALQKDAEPVQKITIVPRTMGALGYVMQTPEEEKFL NTKKELEAMLVGMLAGRAAEEIVFDTVTTGAANDIEKATNIARAMITQYGMSEKFGLIGL ESIQNRYLDGRAVRNCGEATSAEIDREVMEMLKNAYSEARRLLSEHRQSLDKIAAFLIEK ETITGKEFMEIFHEAEGIDPETEKKQGERVTVKEAEPQIEQKSEAAIDSNMESNEAVKEE TEE >gi|224461045|gb|GG657759.1| GENE 1001 1046294 - 1047787 1424 497 aa, chain + ## HITS:1 COG:Cgl2942 KEGG:ns NR:ns ## COG: Cgl2942 COG4868 # Protein_GI_number: 19554192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 491 1 492 495 600 58.0 1e-171 MKKGFDNEKYLKMQSAHIRERIDQFDNKLYLEFGGKLFDDFHASRVLPGFQPDSKLRMLK QLSDQAEIIIVISAEDIEKNKVRGDLGITYDSDVLRLMHAYRENGLYVGSVVITKYSGQS SADLFKNRLEKLGIRVYRHYVIPGYPSNVPFIVSDEGYGKNDYIETTRPLVVVTAPGPGS GKMAVCLSQLYLEHKRGICAGYAKFETFPIWNIPLKHPVNLAYEAATADLNDVNMIDPFH LEAYGRTTVNYNRDVEIFPVLNAMFERIYGKSPYKSPTDMGVNMAGKCICDDEACREASC QEIIRRYYDSLRRLLVGACPDEEAYKIEMLMNQAGITVHDRPVVDAALSRAEETGGPAAA LQLHDGRMITGKTSNLLGASAALLLNALKELAGIDHELHVISPDAIEPIQKLKTQYLGSR NPRLHTDEVLIALSVSAADDAMAQLALDQIPKLKGCQAHTSVMVGSVDMKQFKKLSIQAT FEAKFEKSSVFFNGKGI >gi|224461045|gb|GG657759.1| GENE 1002 1047889 - 1049499 1550 536 aa, chain + ## HITS:1 COG:CAC2892 KEGG:ns NR:ns ## COG: CAC2892 COG0504 # Protein_GI_number: 15896145 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Clostridium acetobutylicum # 1 529 1 529 535 719 62.0 0 MAVKYVFVTGGVVSGLGKGITAASLGRLLKARGYTVTMQKFDPYINIDPGTMNPVQHGEV FVTDDGAETDLDLGHYERFIDESLSKNSNVTTGKIYWSVLQKERRGDFGGGTVQVIPHIT NEIKGRFYRSPAAENTEIAIIEVGGTVGDIESQPFLEAIRQFQHEKGRENVILIHVTLIP YLRASQEMKTKPTQASVKDLQGMGIQPDIIVCRSEYALDAGIKDKIALFCNVPANHVLQN LDVDYLYEAPLAMEKEKLADVVCECLNLPCPKPDLKDWEEMVDYLCHPNTEVTVALVGKY IQLHDAYISVVEALKHGGIFSRATVNIKWIDSESVSADNADELFQDVSGILVPGGFGHRG IDGKLEAIRYARTHKVPFLGLCLGMQLSIVEFSRDVLGYNDAHSAELRPDTTHPVIHIMP DQIGVEDIGGTLRLGSYPCVLDKHSKAYELYGKEKINERHRHRYEVNNDYREELTAHGMK LSGLSPDGTIVEMIEIPEHPWFIATQAHPELKSRPNRPHPLFKGFIEAALNYQTNH >gi|224461045|gb|GG657759.1| GENE 1003 1049551 - 1050231 668 226 aa, chain - ## HITS:1 COG:MA1282 KEGG:ns NR:ns ## COG: MA1282 COG3619 # Protein_GI_number: 20090146 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 15 214 20 219 240 166 44.0 3e-41 MEGKQPGTAAVPIHETFRIAALLAVVGGFLDAYTYILRGGVFANAQTGNMVLLGVYAAQG RYRQAGYCIIPILAFALGVFITEVFKKYFTEKEFNIYEHWIIAIEIILLSVVGFVPASVP DSVVNVTISFVCSLQVNSFRKMKNLPYASTMCTGNLRSGTEKLFQYVINKETKAGIQAAH YFGIILLFILGAVAGTVLAFLWGIQSIWCCSILLGIVFVTMCLTIR >gi|224461045|gb|GG657759.1| GENE 1004 1050250 - 1053411 3022 1053 aa, chain - ## HITS:1 COG:lin1686 KEGG:ns NR:ns ## COG: lin1686 COG0419 # Protein_GI_number: 16800754 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 1050 1 1018 1023 260 27.0 9e-69 MRPIKLVMSAFGSYAGRTELDFTRVQSGIFLITGDTGAGKTTIFDAVTYALYDQTSGGRR DGSMMRSQYASEDVETYVEYTFSYRRDVYTVRRNPEYIRLGKRRRADGSPRFVKEAPKVE LTLPDGKVFQGKKREIDQKIADIIGLDADQFTQIAMIAQGDFLKLLHAQSRERKKIFSRI FHTRFYYRVQEELKRQSTSLYIELEDNVKSVRREIGRAECEADSAYETEWSALKGLPIPD REETLRLLGLIIKEGGEKEKRRRAEADRLQGRLDELHGAMKEGETVNRLFQAYEEACETG MRLRERKEAFREKEAGIACARRVERVRAKEAEFETIRAAAEESGQSLLRLERKEKESAAA AREAYAQEEAAREELSRKEPEYTETLVRLGDALRQYDALKEQEEERDRLSALLCKMRDEC EKAAAEADRLEVYVRGLRKEQEELAGSQAERDRLSAKAGILTDRASALEALEQSAQHIRA FETACREKQQNEAECSAAYVEASAVYEQKYRAFLDEQAGVLAGVLEEGKPCPVCGSCGHP APAHLSDDAPSQEEVEAAKERRNQAELVRESAAQALGEAAGRLRTEREVFERECRKILGP GAGADPAEAEAEIRREAGACRREAEDTKQALCRAQKNVKRYAAVQEEYEKQERELSLKNN ALKESRQKLQELEREYSRQNALAEEKKNKLEYRSKDEAEKRRNEVYGLLEELRERCAKAR ERYERALQDQRRTEGERSGEEKRGRQLDVQRRKAEEGFREALAQEAFASAKEYEAKKPLL ESAKEMESALEQYLSQVRDNEAALKLLGSQIEGKERADVEALKLEAEELSRKIRDIRGGQ IRLGGMNSKNREIREELRKEFEKKGGLQRQYELVGNLSRTANGNLSGAVKLDFETYVQRQ YFKQIIQAANKRLIQMTNNEFILQCRDVKSLGSQGQAGLDLDVLHLLSGTVRDVKTLSGG ESFMASLSMALGLADIVQNTAGAVHLDTMFVDEGFGSLDDGSREQAIKVLNELAGDSRLV GIISHVNELKEQIDNKLIVTKTEKGSSVRWSFD >gi|224461045|gb|GG657759.1| GENE 1005 1053408 - 1054577 1033 389 aa, chain - ## HITS:1 COG:VCA0520 KEGG:ns NR:ns ## COG: VCA0520 COG0420 # Protein_GI_number: 15601280 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Vibrio cholerae # 1 385 1 377 379 182 32.0 1e-45 MRFFHLSDLHIGRQLHHYNLIEDQRKVLGEIAAYAGDIHPDAIVIAGDIYDKSVPSAEAV TVFDEFLTALSGIEPPVPVLVISGNHDSPERLSYASGFLKAHQVYVAGSAPDTGVERISK VTLRDEFGEVDFYLLPFLKPAYVKHLWENDAPESYSDAVRMLIEREGIDFAGRRNVLISH QFYTGEGTAPGTCDSETIAVGGIDNVDTSAVKPFDYVALGHLHGAQSVGCGHIQYCGSPM KYSVSESGHNKSLAMVILREKGEEPEVVRLPLHPLRDVIRKRGKLKDILRVSREEEREDY VSITLTDESEPYKPKEQLEKVYSHILEVRLDNDRVRQKLSEFDEELVLKDPMAVFCDFYA EIQGREPGDEEKEILEQVIDRAGEEESRR >gi|224461045|gb|GG657759.1| GENE 1006 1054594 - 1055379 851 261 aa, chain - ## HITS:1 COG:TP0797 KEGG:ns NR:ns ## COG: TP0797 COG0345 # Protein_GI_number: 15639784 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Treponema pallidum # 1 253 1 256 263 200 40.0 2e-51 MKTGFIGLGSMAQAILEGFIKGGALEGRQVYASGGSYERLEKNCRRFGCNPCRTNEEVID NSDIVIIALKAHMVEEVMKPLAKALKGKIVVSIAAGYTFDTYRDILGTEVHYICTIPNTP VSVGEGVTVCEDRHSLDGQEYDIFYRLFSSIGVVTPVETHLVGAAGTVAGCGPAFASMFL EALGDAGVKYGLPRRTAYELAAQMLCGTGKLYMEKRQHPGEMKDAVCSPGGTTIRGVAAL ERAGLRDAVISAVDEIEGGNV >gi|224461045|gb|GG657759.1| GENE 1007 1055418 - 1056020 642 200 aa, chain - ## HITS:1 COG:CAC1657 KEGG:ns NR:ns ## COG: CAC1657 COG1357 # Protein_GI_number: 15894934 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Clostridium acetobutylicum # 19 197 37 213 216 76 28.0 3e-14 MLAEDIEFARAEEYPLREREYTDEQLTEEDMQKTEFVNTRFLRCRFFDCDFSGAGFYSVL FEKCDFSNCRFSRSYWKASAVRECKGNGAKFDMAVLKHVSLEDCRLDLTNFTRSVWENCS AEECNFAESFFSEVRFRTVRFVKSDFTKADFFRTPLKGIDFSDSIIEGITVSEEHRELEG MKINMFQAAEIARLLGVKIV >gi|224461045|gb|GG657759.1| GENE 1008 1056114 - 1056656 528 180 aa, chain - ## HITS:1 COG:SMa2239 KEGG:ns NR:ns ## COG: SMa2239 COG4422 # Protein_GI_number: 16263660 # Func_class: S Function unknown # Function: Bacteriophage protein gp37 # Organism: Sinorhizobium meliloti # 2 153 77 227 259 72 30.0 3e-13 MKPGQTVYVCFSTDFFIEEADEWRKECWKMMRERPDLQFLFLTKRIERFWDCIPGDWGDG YENVTIGCTVENQARADERLSFFGTLPIRHRNIICQPLIERIDIEKYLDGVELVVVGGES DRNARPLHYDWVLALREQCVNRGVHFEFRQCGTHFIKDGREYTLNVRELGSQARKAGIDC >gi|224461045|gb|GG657759.1| GENE 1009 1056862 - 1057590 757 242 aa, chain - ## HITS:1 COG:no KEGG:Cbei_3432 NR:ns ## KEGG: Cbei_3432 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 4 204 2 200 238 105 27.0 1e-21 MKKMIELTGYGLQVYFKGSRFIMPLVVIIIYEYTMYTIMPVGVVDSFVMTCYFVFFVLVW TGLSTAADENPVMEQVQLLRVRSSFCYYVSRAAVPVVLGLLVSAVCVLFPVIQNVLNHKA LFMRPLTAYDVLNAFLLVAGCSFAGGALGGLLHPRVMSDRKLAVVLTVLFSVLTAVRTGL VQEIPLFRFVLWLLPPVDKIASVYGDADEFRFVQTVLLSAALAGYAAVLFAVKSFICHKR KF >gi|224461045|gb|GG657759.1| GENE 1010 1057574 - 1058377 766 267 aa, chain - ## HITS:1 COG:VNG6326G KEGG:ns NR:ns ## COG: VNG6326G COG1131 # Protein_GI_number: 16120233 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Halobacterium sp. NRC-1 # 4 221 7 232 263 121 37.0 2e-27 MEIIRLENVSKKYGAKLVLDGIEKGFCQGESAAFVGHNGCGKSTLLRIIAGLTVPSGGRV VHERPLLFHYIPEKFPPAAVTARQYLLRMGALDGMRRDEAGKRIESLGDDFFLGGLLDVP MRSLSKGTLQKVGVIQALLTRPDVLLLDEPVSGQDRESQKVLTDKVNELRGKDVTVFLSC HETHIVKAVAEEVYTIRDGRLKAYKAEEVKMRTVLLEHGGDFAVPGGMTKYGRYYRLKAE EKECDRILPGLLSGGWKLRGMYDEEDD >gi|224461045|gb|GG657759.1| GENE 1011 1058404 - 1059075 451 223 aa, chain - ## HITS:1 COG:no KEGG:Clole_3070 NR:ns ## KEGG: Clole_3070 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 10 223 10 219 219 124 35.0 3e-27 MDREGKWTGYLWMSLLSFAAFMLELFSIFVIERVFLHVDAGNYTPGQRSVHSVITACLWA VFILSLLYYSRRRYQFPGKAEDTGRIPPGDWAAALLALAGCKALTFIDWHTLKIIGESRG QDMSRIVTQYIYYMFEAGLVLLIILYGQKAAEVLLKRESGIPFGGIVLALTWGSFHFISR GVGLELWNGISCMIFSVLSGFMYLKVKRRPAYSYLLIAVGYLL >gi|224461045|gb|GG657759.1| GENE 1012 1059114 - 1059317 211 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568897|ref|ZP_03777922.1| ## NR: gi|225568897|ref|ZP_03777922.1| hypothetical protein CLOHYLEM_04976 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_04976 [Clostridium hylemonae DSM 15053] # 1 67 13 79 79 128 100.0 1e-28 MLAKGYETDESELGNVYYPREGIIIPDHIAVNYIEYPWITCFEVEGVEILKEDGGETAGS QKGLDGF >gi|224461045|gb|GG657759.1| GENE 1013 1059375 - 1059464 195 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVELNEQAKAYMLKYEWKHIVLNIEDITS >gi|224461045|gb|GG657759.1| GENE 1014 1059623 - 1062046 2966 807 aa, chain - ## HITS:1 COG:BS_leuS KEGG:ns NR:ns ## COG: BS_leuS COG0495 # Protein_GI_number: 16080084 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Bacillus subtilis # 5 805 3 802 804 872 53.0 0 MSTPYNHKAIEKKWRGRWEENPVNVKEDENGKRQKYYCLDMFPYPSGNGLHVGHWRGYVI SDVWSRYKLLQGYYIVHPMGWDAFGLPAENYAIKMGVHPARSTAENVENIKRQINEIAAL YDWDMEVNTTDPEFYKWTQWIFVKMFKEGLAYEKEFPINWCPSCKTGLANEEVVNGKCER CGTEVTKKNLRQWMLKITAYAERLLNDLDKLDWPEKVKKMQADWIGKSYGAEVDFPVEGR EEKITVYTTRPDTLYGATFMVLAPEHELAASLATPETKEAVEKYIYDASMKSNVDRMQDK EKTGVFTGSYAVNPLNGEKTPIWLSDYVLADYGTGAIMCVPAHDDRDFEFAKKFGIPIVQ VIAKDGKEIENMTEAYTEANGTMINSGEWNGMESAVLKKEAPHVIEERGIGKATVNYKLR DWVFSRQRYWGEPIPIIHCPECGAVPVPEEELPLTLPDVESYEPTGTGESPLAGIEEWVN CTCPVCKKPAKRETNTMPQWAGSSWYFLRYVDNHNSEALVSREKADEMLPVDMYIGGVEH AVLHLLYSRFYTKFLCDIGAVDFDEPFKKLFNQGMITGKNGIKMSKSKGNVVSPDDLVRD YGCDSLRMYELFVGPPELDAEWDDRGIDGVNRFLKRAWNLVMESKDKDIKATKEMIKVRN KMVYDITTRLDSFSLNTVISGFMEHNNKLIEIAKREGGIDKETLSTLAVLLSPFAPHMGE ELWEQLGHEGSVFNAGWPSYDVNAMKDDEVEVPVQINGKTRAVVTVPADVSKEDAIAAGR EAVADKLTGTVVKEIYVPKKIINIVQK >gi|224461045|gb|GG657759.1| GENE 1015 1062218 - 1062640 517 140 aa, chain + ## HITS:1 COG:no KEGG:FMG_1524 NR:ns ## KEGG: FMG_1524 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 128 4 130 143 86 33.0 3e-16 MVNLLIGPKGSGKTQQMIEQANSQVKVCNGNVVFIKKTHRDTASVAFDIRTICMDDFKSI ENIDEYIGFLYGMYSSNHDIECVFIDGLLKHADISLENVPEFIERLKKVSRECEIEFYVS LSATKDELSGIDMADCTLLN >gi|224461045|gb|GG657759.1| GENE 1016 1062748 - 1063920 1006 390 aa, chain + ## HITS:1 COG:lin0516 KEGG:ns NR:ns ## COG: lin0516 COG2843 # Protein_GI_number: 16799591 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Listeria innocua # 83 389 152 462 475 167 30.0 4e-41 MSGIKDAKRKRDRRRKQRKLRLMLGALLAVILCIAVAAGIKSIVAKDKPDSGKKTAKTET KKEKPDTSKVEVKNIVIHTKKGEKDTKKSTSITVSSIGDCTLGTDVNFNPDTSLNAYYIA RGADYFFQNVRPILEADDLSIVNMEGTLTTEDQREEKTYAFKGPPEYAAILSGSSVEAAN LANNHSRDYGEKSYTDTVTALEDAGVATFGYEKVDILEIKGVKVGLTGIYELAEHMEKKQ QVKENIAALKEAGAQLIIVNFHWGIEREYVPNDTQKALARLAVDEGADLVIGHHPHVLQG VEKYKGRYIAYSLGNFCFGGNSNPEDKDTMIFQQTFTITKDGVKKDDNINMIPCSLSSAG GYNDYCPVPLEGAEKDRVLNKIDEYSQAID >gi|224461045|gb|GG657759.1| GENE 1017 1063985 - 1064899 1037 304 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 3 299 5 298 301 105 29.0 1e-22 MAEQIVALFLMMAAGYVLVKSGLFESKDSKVLSNIVVYVCSPCVVVNSFQITLTKDKIMG LLLAAAGAVIIHVLLVGGTRLVQKPLNLNPIEKMSVIYSNSGNLIVPLVSSVLGQEWVFY STAYMVVQTLLLWTHGIGVIDREPQKNYKKILLNPNIIAIFIGVLLFAGGVRLPVPIRDC IGGFADMIGPASMLVIGMIIGNIDLKWVFRQKRPYFICFIRLIAFPLIFIAVFCFAGMQG LHKDAEYILLVVLLAGSAPAAAMVTQLAQIYNKDAMYASVINVMSIIFCIVTMPAMTLLY EFLV >gi|224461045|gb|GG657759.1| GENE 1018 1064917 - 1066548 1931 543 aa, chain - ## HITS:1 COG:no KEGG:Ccur_02400 NR:ns ## KEGG: Ccur_02400 # Name: not_defined # Def: hypothetical protein # Organism: C.curtum # Pathway: not_defined # 4 543 124 688 697 526 46.0 1e-148 MKKSRKLIVAIIIILAAGLYYYVSLPAINIHSSDVWFFVLFLLAAAAVLYAVRKKLGRGE LKQNKVMKTLGVLVLGVGVIYLIGALLSSPIVNAKKYQKLMKVEEGEFTEDVEELSFDKI PLLDKDTAELLGDRKMGSMVDMVSQFEADEIYSQINYKGNPVRVTPLKYASLIKWFTNRS NGIPAYIRINMATQTTELVKLEEGIKYTTSEHFNRNIYRHLRFAHPTYIYDDLSFEIDEE GTPYWIAPVKKFNIGLFGGETVGKVVLCNAVTGETEEYKIEDVPQWVDRAYSADLLVDLF DYYGTLKHGFFNSVLGQKDCLKTTDGYNYLALDDDVWMYTGVTSVNGDQSNVGFVLSNQR TMETKYYKVEGATETSAMSSAEGQVQNLKYTATFPLLLNIADEPTYFMALKDDAGLVKKY AMVNVQKYQIVAIGDSVSQCEENYLDLLLSNGVKEVEKDTREVMTATGKITKIAQAVIDG SSHYYVMLEGSDEIFDVSVVDFIDIVKYDVGQEVTIEYKQGEKANTVMSLTEGKAAADTK TEE >gi|224461045|gb|GG657759.1| GENE 1019 1066577 - 1068010 1451 477 aa, chain - ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 476 5 482 483 378 46.0 1e-104 MIRYILAKMLGVEAALLLLPALVGAVYGEKEALCFLPVSAVLLVIYFIAGKRKPQNRTIY GKEGMIIVASAWILWSLFGALPFTLSGSIPYYLDAVFETVSGFTTTGSSILQNIEELPQC MLFWRSFTHWVGGMGVLVFVMVLTSLDKKNTMYLMRAEVPGPEKDKLVPKMMSTARILYA MYLGLTLIEVILLLFGGMNLFDGLIHAFGTAGTGGFSNYGASVGHFDSAYIDGVITVFMI LFGINFNLYFLLLLGEAKSVWKNEELRVYLGIIAGAVAVITLNISGQFPNPLQAFRYASF QVASIITTTGYATADYNGWPMLSQCILILLMIIGACASSTGGGIKVSRFMIIIKSIKREI KQMLHPKSVNLIKVNGRKIGPDVLRVVYIYLLAYMGIVVGSILLVSIDNLDFGTTFSSVM ATLNNIGPGIGDVGPVGNFAEFSPLSKIVFCFDMLAGRLEIFPFLMLFTLSAWRRKF >gi|224461045|gb|GG657759.1| GENE 1020 1068041 - 1069399 1664 452 aa, chain - ## HITS:1 COG:FN0242 KEGG:ns NR:ns ## COG: FN0242 COG0569 # Protein_GI_number: 19703587 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Fusobacterium nucleatum # 1 451 1 450 452 301 40.0 3e-81 MKIVIIGDGKVGHKLTAQLSEENYDIVLIDQNEGKLKEALNQLDIFCITGNGADVEIQKQ ADVPHADLVIACASTDELNMLSCLLAKRLGAKHTIARVRNPVYYRQIDLLKEDLHLSMAV NPELAAANEIARVLLFPETSKVETFMKGRVELVEFPVREESHLIGLSLAEIYQKYQIKIL VCAVKRGSEVYIPDGDFVLERGDKLHIAAAHQELKSFFCALGRKTTKVRKVLICGGGHVC FYLTGQLLQAGMQVKIIEQNEKRCEVLCENLPRATIIHGDAASHELLLEEGIQSADAVVA LTGMDEENIIMALFAKTQGVNKIVAKVNEDTRAQMVEGLGIDSIISAKSATADAILGYVR ARNNSARSVNMETMYRLINGKVEAQEFIIKKEGDYINIPLKDLPTKPNNLIACIGRNRKI IIPGGEDHLEVGDSVIIITKEHVINDLSDILA >gi|224461045|gb|GG657759.1| GENE 1021 1069505 - 1071583 2446 692 aa, chain - ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 690 3 689 690 590 45.0 1e-168 MKVYRTDEIRNVVLLGHGGSGKTSLTEAMAYVSGATNRMGKISDANTISDFDKEEQKRKF SISTTLVPIEWEKAKINVLDTPGYFDFVGEVEEAVSAADAAVIVVSGKAGVQVGTEKAWQ LCDKYNLPRMVYVTEMDVDDASFREVVQELTDKYGKVIAPHFQPIRENEKLVGYVNVIKN AGRRYTGIGEREECEIPDYCRPNLEIYREKLLEAVAETSDEFMERYFAGEEFSVEEIRAA MRTEVMDGSIVPVSMGSNIQAQGVANLLSDIVRFFPSPDNRECAGINRKTNEIFEANYEF SKAKSAYVFKTMVDPFIGKYSFIKVCSGVLKGEDILYNADSDTEEKLGKIYTMVGNKPVE VSEMFAGDIGAIAKLSSTKTGDTLSAKGTPVLYGRTEYSKPYTYMKYICKNKGDEDKVSQ ALQKMMAEDVTLKAVNDSENRQTLLYGMGDQHLDIAASKLAARYKCEISLDTPKVAFRET IKKKSDVDTKYKKQSGGHGQYGHVKMTFEPSGDLETPFVFAETVVGGAVPKNYFPAVEKG LQDSVVKGPLAGYPVVGVKATLYDGSYHPVDSSEMAFKTATVQAFKKGFMEAAPVLLEPI ASLKVTVPDDYTGDVMGDLNKRRGRVLGMNPTAGGFQVIEADIPMTGLFGYCTVLRSMTG GRGTYEYEFSRYEQAPSDIQEAEVAKRAADSE >gi|224461045|gb|GG657759.1| GENE 1022 1071818 - 1072912 1176 364 aa, chain + ## HITS:1 COG:BH1666 KEGG:ns NR:ns ## COG: BH1666 COG0287 # Protein_GI_number: 15614229 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Bacillus halodurans # 8 362 9 364 366 239 37.0 4e-63 MHNKIGFIGLGLIGGSIAKAIRQYFPDYEIVAFDKNRETLALATQESLIHVAATSIDNNF KDCSFIYLCAPVAYNTAYLKQVQGFMHSGCILTDVGSVKTNIHEEVKALGLEDYFIGGHP MAGSEKSGYVNSKAMLIENAYYVLTPSAKVPQEKVKRYREFTEALKAIPVVLDYREHDHI TGTISHLPHIIASSLVNFVKDTDTEDEMMKQLAAGGFKDITRIASSSPAMWQHICLKNRE NISGILGEYIAALQRAKETVDRADEQGLYDLFDNSRNYRNSIPESSAGPIKKAFAVYCDI IDEAGGIAAIATILASNSLNIKNIGIVHNREFEEGVLRIEFYDGVSSSKAADLLQKFRYI VYER >gi|224461045|gb|GG657759.1| GENE 1023 1072902 - 1074200 927 432 aa, chain + ## HITS:1 COG:BS_aroE KEGG:ns NR:ns ## COG: BS_aroE COG0128 # Protein_GI_number: 16079317 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Bacillus subtilis # 12 431 9 424 428 400 51.0 1e-111 MSVKNIGRSSGLKGTVRVPGDKSISHRAVMLGSIALGTTEITNFLEGADCLATIGCFRKM GVEIEQRQECILVHGKGLRGLRPPAGILDVGNSGTTTRLISGILCGQDFTSVLSGDASLN SRPMGRIITPLRNMGASVTSVNGNGCAPLKIEPGRIHGIHYESPVASAQVKSAVLLAGLY ADNTTSVTEPSLSRNHTELMLQNFGAALSAAMHPDGRATAELAPCTELYGRQIHVPGDIS SAAYFIAAGLTVPGSELLLKNVGTNFTRAGFLTVCQNMGARVTRLNETVQGGEARADLLV TPGRLHGTVIEGDLIPSLIDEIPVIAVMAACAEGTTVIRDAAELKVKETDRIATVTENLR AMGACVTPTEDGMIIEGRGGLKGAFIESHMDHRIAMAFAVAALSAKGESRINNSQCVDVS YPAFWETLDMLR >gi|224461045|gb|GG657759.1| GENE 1024 1074301 - 1075485 1147 394 aa, chain - ## HITS:1 COG:no KEGG:Nther_1024 NR:ns ## KEGG: Nther_1024 # Name: not_defined # Def: hypothetical protein # Organism: N.thermophilus # Pathway: not_defined # 1 390 1 412 424 92 24.0 3e-17 MNYRERFRKYVDGTLEGEERARIEEDLEKTQVLLDYLDSSIDEELFSAEDESAGKDKPGR AQWNGREHDLSRRISRAVNRKLRRYAAVTGAVVLLLVFIGVNVLSPALDALYYNPSRPKA SDPPIDLNMAVYMELMCADKGYANVHVRPEGYGRHSIDVQTQRNGRTDHHYLELNKNHLY WTDMSWNQSEVPGNAFTYCVEERDSFSGISAREAADRLQGLPDTMAVRAAISFKEPKDTG RLVQFMDKYSGEFLYVPFETYEDQKGTMTEYMGYRPDAAGYVRTDSYDAEKYPYLDLAQY EKDGRIPADVLEKHVISLLAYMTDNERFGRIFASEVPGENVFNRIKFESALDYVKKNGVN GYGAVVNAGRDELLELLADPDVDGVYLMDAHLNL >gi|224461045|gb|GG657759.1| GENE 1025 1075489 - 1076010 443 173 aa, chain - ## HITS:1 COG:BS_yhdM KEGG:ns NR:ns ## COG: BS_yhdM COG1595 # Protein_GI_number: 16078017 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 6 155 3 155 163 74 30.0 1e-13 MEKDLLEQVYMEYMKPVYLYLFSLCHSHETAEDLTQETFLRALCSLEQTERILPWLLRVA KNLYIDVWRRERASRMQQERELTDEEEEILEQLIKKEQNRRLYGTILCLSDREREAVVLY YFAGFSQEEIGRQMEIGHGNVRVILHRAKRKLKEMLKESDGKRHGGSDTKRRV >gi|224461045|gb|GG657759.1| GENE 1026 1076112 - 1077284 1483 390 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0091 NR:ns ## KEGG: Cphy_0091 # Name: not_defined # Def: protein serine/threonine phosphatase # Organism: C.phytofermentans # Pathway: not_defined # 1 390 1 390 390 550 67.0 1e-155 MNVSVDVAWKSLNKHGEELCGDKVEVLKTGDSEIVILADGMGSGVKANILATLTSKILAT MYLEGAPIEACVETIAKTLPVCKVREVAYATFSILQIFHNGDAYLVEFDNPSCVFVRDGK VVDYPYEERVIEDKVIHLYRFKVQLNDCFVLMSDGVIYAGVGELLNFGWTWDSMAEYTLK CTKETLSASRLAAMLSKACDDLYGQKPGDDTTVAVTRVIERRIVNLFTGPPTQKEDDERV VKDFMRGEGRKVVCGGTSANIVARILHKDIVTSLNYADPNVPPTASIDGLDLVTEGVLTL GKALNLLRRYEQDEFDEAFFDELDAENGAAKLAKLIIEECTELNMFVGKAVNTAHQNSNL PFDLSIRMNLVDQLKECAEHIGKNVNVKYY >gi|224461045|gb|GG657759.1| GENE 1027 1077286 - 1078896 1941 536 aa, chain - ## HITS:1 COG:TM1421 KEGG:ns NR:ns ## COG: TM1421 COG4624 # Protein_GI_number: 15644172 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 1 270 37 281 301 140 34.0 6e-33 MKDHCINCGHCLEVCPQNAKTFASDMERVKGYLKQGMKTVISIAPSYLGVLEYEKPGQVV DALLKLGFYEVRETAEGAALVTQEYRKLLKDGTMKNIITTCCPSVNDLIEKYYPALTGQM APVVSPMIAHGRLIKQIYGEDTKVVFLGPCIAKKEEAVGDKRVIGAVDAILTFEEITKWW AAEGIDVNACEDRPLGNPDPRVNKLYPVGGGIVKSILADSVEDNYYKVYVDGLKPCMELF EELMKGEISDCFFEVNVCEGGCIKGPASDKWQQTVIKAKMNVEDQVGHREPAEGIDGSSI SMEKQFHDRHVADRMPDGSEMRDVLKAMGKYTAEDELNCGACGYPTCRAKAVAVYQKKAE IGMCLPHALEQAESMSNVVMDVTPSMILIVDKDMRIRECNKKAQEMLDVSREEALERYIF EFLDDRDIAEVLRTKRQVIHKKVGLESIGMTVVESIIYIESLESVLVTYQDITKEEKAKE QHYNLKIETVEMAQRVIDKQMMVAQEIAGLLGETTAETKVTLSKLRDSILFEEEGE >gi|224461045|gb|GG657759.1| GENE 1028 1078998 - 1079243 284 81 aa, chain - ## HITS:1 COG:TM1420 KEGG:ns NR:ns ## COG: TM1420 COG1905 # Protein_GI_number: 15644171 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Thermotoga maritima # 1 76 3 75 77 58 41.0 3e-09 MKVQICIGSSCHLRGSETIVKTFNRLLKEEKLEAQVELCGSFCMGACSKGVSVKIGENIY HVKPEDAEDFFREVIRKEAAR >gi|224461045|gb|GG657759.1| GENE 1029 1079356 - 1079595 336 79 aa, chain - ## HITS:1 COG:no KEGG:ELI_2272 NR:ns ## KEGG: ELI_2272 # Name: not_defined # Def: ribonuclease barnase inhibitor barstar # Organism: E.limosum # Pathway: not_defined # 1 75 1 80 89 62 42.0 5e-09 MKEVILDAAHMQKKEETHVYLREKFGFPDYYGANLDAFYDCLTECAGLRVIVLNHAQAGP YASAVIQIMMDADAEVELR >gi|224461045|gb|GG657759.1| GENE 1030 1079608 - 1080102 566 164 aa, chain - ## HITS:1 COG:no KEGG:ELI_2271 NR:ns ## KEGG: ELI_2271 # Name: not_defined # Def: S-layer-like domain-containing protein # Organism: E.limosum # Pathway: not_defined # 42 157 33 148 153 156 65.0 3e-37 MSRKLRCLAGVLVLLFCLTAGGCGGADDYGISAGGAGQETGDRGNTVKVEESGEYTSKEE VAAYIHTYGHLPDNYITKREAKALGWDSRKGNLDEAAPGKSIGGDPFGNYEGLLPEKPGR KYYECDIGGDGGYRGAERIVYSDDGLVYYTEDHYESFDLLYEGK >gi|224461045|gb|GG657759.1| GENE 1031 1080269 - 1081606 1482 445 aa, chain + ## HITS:1 COG:CAC0326 KEGG:ns NR:ns ## COG: CAC0326 COG2256 # Protein_GI_number: 15893618 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Clostridium acetobutylicum # 4 438 5 438 443 579 62.0 1e-165 MNEQLSLFDNERELTPLASRLRPESLDDFAGQEHLLGPGRLLRQLIDKDQISSMIFWGPP GVGKTTLARIIARRTKADFIDFSAVTSGIKEIKEVMSKAEKDRHAGIRTLVFVDEIHRFN KAQQDAFLPYVEKGSIILIGATTENPSFEINAALLSRCKVFVLQALTEKDLLRLLGHALS SPAGFGHLNVDITPESLQMIAGFANGDARTALNTLEMAVLNGELTPEKTIVTKASIEQCI SRKSLLYDKNGEEHYNLISALHKSMRNSDPDAAVYWLSRMLEAGEDPLYVARRLVRFASE DVGMADSQALPLAVAGYQACHFLGMPECNVHLTHVVTYLSMAPKSNALYIACETCRADAQ KCLAEPVPLHLRNAPTKLMKDLHYGKGYEYAHDSDDKLTTMQCMPDSLKDKTYYHPTDEG AEAQVKARLAQIRAFRGTGMDSGKK >gi|224461045|gb|GG657759.1| GENE 1032 1081673 - 1081780 60 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKSSSFDDIFTESHGRWNRDNIRLSEWTCEGKPK >gi|224461045|gb|GG657759.1| GENE 1033 1081975 - 1083348 1529 457 aa, chain + ## HITS:1 COG:aq_1410 KEGG:ns NR:ns ## COG: aq_1410 COG1350 # Protein_GI_number: 15606594 # Func_class: R General function prediction only # Function: Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) # Organism: Aquifex aeolicus # 10 439 3 434 434 467 54.0 1e-131 MKDTKQIPYKIYLEESEMPKQWYNVRADMKNKPAPLLNPGTLEPMTFDELRGVFCDELVR QELDDTTPFFDIPQEIQDFYKMYRPSPLVRAYCLEEALQTPARIYYKFEGNNTSGSHKLN SAIAQAYYAKNQGLKGVTTETGAGQWGTALSMACAYLGLDCQVYMVKCSYEQKPFRREVM RTYGANVTPSPSETTNVGRRILAEHPGTSGSLGCAISEAVEAALSQDGYRYVLGSVLSQV LLHQSIIGLETKAALDKYGITPDIIIGCAGGGSNLGGLISPFMGEKLRGEKDYQIIAVEP ASCPSLTRGTYAYDFCDTGMVCPLAKMYTLGSGFIPSPNHAGGLRYHGMSSVLSQLYDDK LMEAVSIEQTAVFEAATRFARIEGILPAPESSHAIKAAMDEAIKCRESGEEKTIVFGLTG TGYFDMTAYGKFNNGEMTDYIPTDEDLAEGFAGLPAV >gi|224461045|gb|GG657759.1| GENE 1034 1083432 - 1084160 547 242 aa, chain - ## HITS:1 COG:CAC3297 KEGG:ns NR:ns ## COG: CAC3297 COG1876 # Protein_GI_number: 15896541 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 61 240 77 234 241 138 41.0 7e-33 MIFYGILMIIICLFVFVCGFTCAREFAKTQAGAAKKPAGSARVNSGTQENAQTGTDASAW NLRLVNASHPIDEGYSFDITLLKNGQSVDSRIFRELQDMMDAARSEGLSPLICSSYRTEE KQRALYEAKVASCMDQGDLREEAEKQAAIWVAPPGTSEHQLGLAVDIVAESYQLLDRHQE KTAEQQWLMEHCSEYGFILRYPTDKSEMTGIGYEPWHYRYVGREAAEEIMRRGICLEEYL EL >gi|224461045|gb|GG657759.1| GENE 1035 1084259 - 1085056 831 265 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568922|ref|ZP_03777947.1| ## NR: gi|225568922|ref|ZP_03777947.1| hypothetical protein CLOHYLEM_05001 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05001 [Clostridium hylemonae DSM 15053] # 1 265 1 265 265 477 100.0 1e-133 MKNRTWVAVLLLAAVLGASVYVPIRLSGYEDRRLLREVKTEKLSRSAKPEKSQQDTLENL SVISRARRMGSEIVSGKVTYNTADKKLVKLVGNGLEKLLQSGIVTGEGLNYDIKILEAVK LYYTQTDGQKKVRCYYIEMQCSGSGLWLLMDEETELIYEISIEPEISIEPEIGTELNGAG AAVRLTENAQDKWAEYLGITLKKMSAQPMENIVVYETEDTDVFYMFTRPEYIEGNYISIA DSFSLGYSEDDANTMREGSSIDAVR >gi|224461045|gb|GG657759.1| GENE 1036 1085053 - 1086483 1380 476 aa, chain - ## HITS:1 COG:CAC1507 KEGG:ns NR:ns ## COG: CAC1507 COG0642 # Protein_GI_number: 15894785 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 461 1 473 473 218 29.0 3e-56 MKFFWKIFCSTIIITAFTCSVGGYFLIHSQFQLSLDREIAAAYAENDILGQILDQELKDL TSMKEEVPEIADNITVNVSGGTIAFTVSDEKGSAVYRNSDLSGSRDIYGKIGGDNKGYEI YKTQGKYYIHAVRPIYARGEVMYLESFREITYLFEAKRQQYTTFAVLMAVLFVGVGLVSF VVSSLLLSPLKKLSSATKQMADGSFRPKLNIARSDEIGELASDFEQMSVKLEDMVNELKE YSRRQQDFVDNFSHELKTPLTSIIGYADMIRSREMEPERRMACADYIYTEGKRLETLSLK LMDLIVLENQEFTFRPVYMREFLGQIANAFAPVVADSGILFSSKVRDGVVSLEPDLMKTV CMNLLDNARKAAGRGDRILFTGRRLPDGMYCISVEDSGKGIPKGELSKITEAFYMVDKSR ARAQGGAGMGLALCSRIVKLHRGRMKFVSREGKGTRVSVCLRDDSASREDKEGRKK >gi|224461045|gb|GG657759.1| GENE 1037 1086487 - 1087140 659 217 aa, chain - ## HITS:1 COG:CAC1506 KEGG:ns NR:ns ## COG: CAC1506 COG0745 # Protein_GI_number: 15894784 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 216 1 216 217 208 48.0 6e-54 MNKILIVEDEVPISNLIKESLSDAGYLCFCAFDGIQAADMVEQKRYDLVLLDIMLPEING YELLEYIRPLGIPVIFLTARSDVRDKVKGLKSGAEDYITKPFEIAELLARVETVLRRYGK TQRTVTLFDITVDTLSRTVKRNGETVALTAKEYELLLLFAQNRNVALYRDFLYERVWGET YLGDSRTVDLHVQRMRKKLGLEHKIVPVYKVGYRLEA >gi|224461045|gb|GG657759.1| GENE 1038 1087249 - 1087947 779 232 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3597 NR:ns ## KEGG: Cphy_3597 # Name: not_defined # Def: ABC-2 type transporter # Organism: C.phytofermentans # Pathway: not_defined # 1 231 1 229 231 123 33.0 7e-27 MAGKKIYAVWKKQMKDTLKNKAVLIQFVMFPVLSVIMQNSIQIEGMPKRYFIILFATMYV GMAPLTAAASIISEEKEKNTLRELLMANVKAGEYLLGIGLGIFVCSMLGAAVFALAGKYT GREAVHFLLIMGAGIIISLLLGAVIGITCRNQVTEVSVSVPVMLVFSFLPMIASFNEQVG AVSKYAYSQQISNYIGAIGEPAAGGGNLAVILCNAGLFAVLFVIVYRKCRLA >gi|224461045|gb|GG657759.1| GENE 1039 1087951 - 1088796 828 281 aa, chain - ## HITS:1 COG:BH3893 KEGG:ns NR:ns ## COG: BH3893 COG1131 # Protein_GI_number: 15616455 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 1 281 1 281 282 229 43.0 5e-60 MERKISAENVRMRFKDKEVLKGISLSVSEGEIFGLLGPSGAGKTTLIKILTGQLGQTGGE AFIMGHDSRHPDNTVCARIGMVMDNSGLYERLSCRDNLAVFTDIYGISKKGIGEALYKVG LADAAKTPVHKLSKGMRQRLVLARALMHRPEVLFLDEPTGGLDPATASCIHSLILEQRDR GTAVMMTTHNMEEAAKLCGRIALLNDGSIVEEGEPEEICRRYNHQNKIKISLNDGRTVLL GNERSEAETIAEYFRSGMVAGIHSTEPDLQTVFMELTGRGL >gi|224461045|gb|GG657759.1| GENE 1040 1088774 - 1089274 420 166 aa, chain - ## HITS:1 COG:no KEGG:Ccur_00250 NR:ns ## KEGG: Ccur_00250 # Name: not_defined # Def: hypothetical protein # Organism: C.curtum # Pathway: not_defined # 59 164 59 164 164 62 29.0 8e-09 MEEKRTIFSYLSQVLVIFGFTMLCMAVFTHLFGESARGISALYRLGSKGIPLEIMLEFFV LSIIVVLLQYVFFTDVLFKKLTAGRRALGMVACILASVCVFIFLFGWFPADMWQPWVLFL LFFAICFFVSTGISAWKTKLENRKLQEGLEKMKRQWEEENGTEDQR >gi|224461045|gb|GG657759.1| GENE 1041 1089277 - 1089714 621 145 aa, chain - ## HITS:1 COG:lin0983 KEGG:ns NR:ns ## COG: lin0983 COG3279 # Protein_GI_number: 16800052 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Listeria innocua # 26 145 27 146 151 89 40.0 2e-18 MKITINTDPAVSGTEITVNCAYLTPEVEKIISMLRMLEQKMTGIRDGEIHLLDIASILYI DTTDKKTFLYTMESVYETEMKLYELEEQLEESGFLRIAKSCIVNVRHITSLRADIDRKIR VTMDNREQLLVSRQYTKQLKERLGI >gi|224461045|gb|GG657759.1| GENE 1042 1089918 - 1092407 2258 829 aa, chain - ## HITS:1 COG:CAC0454 KEGG:ns NR:ns ## COG: CAC0454 COG0577 # Protein_GI_number: 15893745 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 13 829 7 832 832 92 21.0 4e-18 MLKNNNGRIITKLARRSMAGNRRRNAVMATAILLSAFLLFTILTVGITYFKMQTRQEMRM KGADFDAVLIGGFTKEQRQLCEENADITTIGTEAKAGYTEETDEDDTLHTILIWSDDTYW NTQRKPAVERMEGRYPTKENELLATKAALEDCGKGDLGTGDSFALTYQDKHGTHTKEFII SGIWEGYGDNKVFYVSKSFFEQSGYKFSDTNSGILYLNFKSVLMTERAQSDFRDSLELGK QQRLFYSSGVEMSVQIVAGLAGLIIMTCLSAYLLIYNILYLSVSGSIRYYGLLQTVGMTG KQIRRLIQRQMLMIGTAGTAGGILLGSAVSFFLIPKVVKLMGIRDEVEVAFHPAVFLLSV AVAAATIYLGSRRPARIADSVSPLEALGYRAVSGNKPSHKTGKGNILWRMAREQLGRDKK KTGIVILSLAACLSVFLCLVTMIESHGARTIMSNYMNSDLIISNDTLRKEDTSKWARIID KKFITGIREMDGVKQVHPMTSTQIIIPWEPGFSDMWMKEFYETWMDHSYGQDVEEYRQHP EKFYTFMSGIDEEEFDYVNSTLEKPVDKEKFMNGETCLIYRDDLSLKLSDVRGKKLAFTP YDDSAQSYSMEIGGMVDDGYYAYMTGMAPVIIVSDAFVDKTVEDPWISRAGIQYKEEYDA QTEAQIKDFAEKGPHGGDVSYDSKIDTMKSVKKAQGNMMGVGIGITLILAMIGIMNYINT VSGNIQNRQTELSVMESVGMTEKQVKGMLIREGLLFAGISLLLTATAGLGVTYACYESLN YMGIAFSVPVLPVLAMTALVSAVCTLVPLAVYEVIAGKKTIVERIRGFE >gi|224461045|gb|GG657759.1| GENE 1043 1092400 - 1093089 218 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 225 7 225 318 88 30 1e-15 MKTWIVETKHLKKYYKLGENTVKALNGVDFQAEEGKFTAIVGKSGSGKSTLLHMIGGLDT PTEGQVIVDGKDLSRMNKEQLAVFRRRKVGFVFQSYNLVQDLNVYENVILPIELDGARVD REFVDEILKLLKLDEKREALPCTLSGGQQQRAAIARALASKPSIILADEPTGNLDTGTSH DVMGLLRVVARQFHQTLVLITHDQDIAQLADRIVRIEDGRIVKGSERHA >gi|224461045|gb|GG657759.1| GENE 1044 1093196 - 1094122 929 308 aa, chain - ## HITS:1 COG:CAC0451 KEGG:ns NR:ns ## COG: CAC0451 COG0642 # Protein_GI_number: 15893742 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 61 302 166 408 416 150 32.0 4e-36 MAEVIIPALCFAAAAALMWHRMRELKRDIYTFTEKLEKSLDVMEKGEELKESGLPEDTLW GKTEGKLVKINHMWHQKYEENSREKRQMKELISDISHQTRTPVANMKLYLELLQSGAPDS EKYSEFLGKMAGQTEKLDFLLQGMVKMSRLEAGIIEIQCQKARIFETLVRAAEAAVPAAG KKGIKISVECAEEIQVTHDGKWTSEAIFNILDNAVKYTDPGGTVHISVTEQEFFTKISVK DSGKGIAQERQPLVFQRFYREPEVHGEEGIGVGLYLAREIITRQKGYIEVRSEAGAGSEF CIYLPNGI >gi|224461045|gb|GG657759.1| GENE 1045 1094110 - 1094778 621 222 aa, chain - ## HITS:1 COG:CAC0450 KEGG:ns NR:ns ## COG: CAC0450 COG0745 # Protein_GI_number: 15893741 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 220 1 222 227 171 41.0 9e-43 MQKILIVEDDIELNQGISYSLEREGYLVISAHSLKEARRLFWQECADLVLLDVNLPDGEG FALCRWMKEQKEIPVIFLTARDMEEDALNGYETGADDYVTKPFSMKILLKKMNVILKRAD TGARNIYDDGFLKIDFDMAKMEAGGTECAVTPTEFRMLRLFTDNAGQLLTYSVLLEQLWD CDGQFVDRHTLAVNVNRLRGKIEDEKHKYISNVYGMGYQWLK >gi|224461045|gb|GG657759.1| GENE 1046 1094908 - 1095666 664 252 aa, chain - ## HITS:1 COG:BH0408 KEGG:ns NR:ns ## COG: BH0408 COG0789 # Protein_GI_number: 15612971 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 247 1 241 255 152 38.0 5e-37 MEYSIRELSDMAGVSARTLRYYDEIGLLKPLSTTEAGYRYYGRNEVALLQQILFYRERGF DLKCIRSILYEDGFDIMSALEDHLLGLYEEKRHVDALIRTVKQTISSMKGECSMNDKEKF EVFKENMVKENEEKYGAEARQKYGDESVDASNRKVLNMTEKEYERFEELGGEIRRLLEEG VRSGIKPDGEEAGSIAALHKEWLCMTWKQYTPEAHRGITRMYVEDERFRAYYDKEEQGCA ALLKEAVDHWAD >gi|224461045|gb|GG657759.1| GENE 1047 1095812 - 1097350 1702 512 aa, chain - ## HITS:1 COG:CAC0033 KEGG:ns NR:ns ## COG: CAC0033 COG0661 # Protein_GI_number: 15893331 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Clostridium acetobutylicum # 14 511 34 531 532 299 33.0 1e-80 MSVLKKHSIARGVTPEKLRLILEDLGPTYIKLGQIMSMHSDVLPKRYCDELMRLRSDVSP MPFEQVREVIEASYMCPLGEVFQEIDDAPLGSASIAQVHRAVLESGEKVVVKVQRQGIYD TMSRDIGLLHKAVRFLPPVNMKGLVDLDLVLDELWSVAQEEMNFLNEASNMEEFARLNRE VAFVDVPVLYREFTTGQVLVMEYIDGFGIDEKERLLENGYELAEVGSKLADNYVKQIMED GFFHADPHPGNVKVRGGKIIWIDMGMMGRLSPRDKELIAGAVQGVAENDVGQILESVMAL GEFKEKPDQSRLYADIGNLLTRYGTTDIGKIDIAGIIEDLMEVMKDNKIIMPHGLTMLAR GMSHMEGVIADISPEINMVEVASARIAGNLLAGGRWKKELKSGGRSIYRSIHKALDIPAL AADLLRGFLKGQNRINLDLHATEDLNAMLTKLVKKLVMGFLVTALLISSSIICTTDMKPK LWGIPALGAFGYLLALGLAVWIFLSHIHTKRK >gi|224461045|gb|GG657759.1| GENE 1048 1097391 - 1097768 634 125 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0665 NR:ns ## KEGG: EUBREC_0665 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 99 1 99 150 92 65.0 5e-18 MDNLGESLKKVMLAGVGALATTAEKSKEILDDLVKKGELTVEQGKVLNEELKHNVKKAVK DNVTVKVKPTTPEELGELLDKMTPEQISQLKELLEGLEQEADPKSEGEMTEEGPEEGKSD GASNE >gi|224461045|gb|GG657759.1| GENE 1049 1097761 - 1098108 226 115 aa, chain - ## HITS:1 COG:L35832 KEGG:ns NR:ns ## COG: L35832 COG2315 # Protein_GI_number: 15674158 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 4 111 3 114 114 97 40.0 6e-21 MTERKEVISHCLAFQNVYEDYPFRDTDWCVVRHKDNRKVFAWIFEREGHIWVNVKCSPEW AEVWRQTYPSVLPAYHLNKKHWNSIILDGTVPDEEICRMIGDSYDLTGERRKENG >gi|224461045|gb|GG657759.1| GENE 1050 1098125 - 1099162 1127 345 aa, chain - ## HITS:1 COG:L95012 KEGG:ns NR:ns ## COG: L95012 COG0818 # Protein_GI_number: 15673069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Lactococcus lactis # 226 342 32 150 151 91 46.0 2e-18 MAEDRTGGNTIHIWKLAVLIVGLAAFVLLLGDVTGSYRLEGVDIAVCTAVQSLRCPFLTG FFKVMTNMVHPVVLLIISMAMIHTLRQRQYLIALFVNLVLAVLLDLAAKGWIMRERPPQG QQMIAETGYSFPSGHAMLAASFYGFILFLIWQTKKSRTYKTAGTVICLTMIVLTALSRIY LGVHYATDVLGGFLAGMIYLIIYTSVARRYFAKGIPGRGQSEAEINPLLKSFQYAFAGII TGLKTERNMMIHYSALGLVVVFGITLKLSVTEWCICLILCALVISLELVNTAVEAVVDLV TKEHRRRARIAKDTAAGAVLIAAMTAAVIGGIIFGPKILALFALK >gi|224461045|gb|GG657759.1| GENE 1051 1099253 - 1100119 947 288 aa, chain - ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 288 1 287 299 291 50.0 1e-78 MLMNMEKILSAANENCFAIPAFNTPTSMILRGLIEAGEEADAPMIIEIHPDELEFAGESF LKSVIEEAHKTHIPVCIHMDHGSRKDQIVKAIRCGYTSVMIDASSRPFEENVSICREVCE LAHAVGVSVEGELGTIGTTNQDIESTTSTEIRYTDPEAAKRFVEESGVDTLAVAIGTCHG IYPEGRQPKLELERLREIKEKVGIPLVLHGGSANRDEEIAEASRMGINKINISSDVKDAF YQKCREVLQNPYLREPEDIYMPCIAQMKKVALHKFELLGTAGKAKLYK >gi|224461045|gb|GG657759.1| GENE 1052 1100037 - 1100195 87 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVGVLKAGIAKQFSFAADNIFSIFINMSFSSYLRFIVLLNVTIITHILYIM >gi|224461045|gb|GG657759.1| GENE 1053 1100432 - 1101283 504 283 aa, chain + ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 4 253 6 266 302 190 37.0 2e-48 MTTGTIFDIKEFALYDGPGIRTTVFFKGCPLRCTWCHNPEGLSFAPQLMTAVNNCVHCGK CTAACPRSGMDCNACGSCVPVCPLHLRKICGDKYSSRELAALLMRDADFLRKNGGGITFS GGEPTFQSAFLLELSSLMPTVHKCIETCGYCSAQIFTSVLDEMDHIIFDLKLADPGMHRR YTGTDNRPILDNLERLKKSGRPFTVRIPVIPGVNDDDASLDAAARLLKNAPALDQVELLP YHLTAGAKYPMVGLAYTPGFSVSSNPRLNTDIFRQYGIPCTHL >gi|224461045|gb|GG657759.1| GENE 1054 1101296 - 1103359 1286 687 aa, chain + ## HITS:1 COG:MTH346 KEGG:ns NR:ns ## COG: MTH346 COG1882 # Protein_GI_number: 15678374 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Methanothermobacter thermautotrophicus # 100 683 88 631 642 253 30.0 1e-66 MKSNYIQKLYDYFIVGKSHRVYRQPAEDPYRQAGKWSRQGISDTARASLRLRYVLEHEKP VVLPSERIALLRTFPTVPELHTEQEDKRLRAQFAFHENGRVFNMCPDYQLFMEAGSGAVK EKIKLQMSKNITKEQRSLLDAMLDSLLCMEELADRYRAEAASAGNAVVAETFASIPRNPP RSFLESLQFLRLLHYTLWCNGNYHNTLGRIDQYLYKYYRLDLDSGRLTKDDALELLEEFF ISCNKDSDLYIGIQQGDNGQTVVLGGSGPDGTDDYNELSELCLIASRELCLIDPKINLRV HRNTPLETYELATTLTQKGLGFPQYTNDEVIIPALLKWGYDKTDAYRYTIAACWEILIPG YMDLVNWDSLCFPQAVSEAAEHLESCGDYDDFARLVQENIVRQADALMKSTENVYKEPSP FLSLLCPDCLNEIRDISAPGKYNNYGFHGDGLSCAADSMAAVRRYVFDEKLFTASQLTEM LHKDFSGYEAEQNILRYEAPKMGNNDDYADSIAVQLIDSFAAALDSHRNDRGGRFRPGTA SAMYYIWHSRKTPATADGRNAGEPFSCNYSPSLYARCKGPVSIIKSFAKPHLEKAANGGP LTLELHDSSFRNRDALRKCAMFVKSYMELGGHQLQLNAVNRERLIDAQRHPESYKNLIVR VWGWSGYFVELDEVYQNHIIKRAEMTF >gi|224461045|gb|GG657759.1| GENE 1055 1103442 - 1104329 791 295 aa, chain + ## HITS:1 COG:PM1714 KEGG:ns NR:ns ## COG: PM1714 COG1737 # Protein_GI_number: 15603579 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 23 270 23 262 288 109 28.0 6e-24 MNSLTNPILATKLHYMHFNPAMRRIADILITDTQSLLNCSIGDIAEKSNVSAASVTRFVQ ILGYKNFKAFRQSLQEYLLAGQDQLSVTSSEIAMSESSAPESICNYVIQSEIEMLRDTLS LMDFPTMDKVAKKICSARHVIFIGEGRSYIAAQSACNRFDRLGILCSCYGDPHSMLPAIG MAQPEDLIVGISNFGHSRPVVNCIKYAREHGVPTVAITSSQDSPLAQQAESLIITGFNYN NLANQGEIICYEPMSENLPQFSLIDCLYLIAGNYQSKERVNRYYECTRLIEAERI >gi|224461045|gb|GG657759.1| GENE 1056 1104420 - 1105358 1071 312 aa, chain - ## HITS:1 COG:BH3927 KEGG:ns NR:ns ## COG: BH3927 COG4989 # Protein_GI_number: 15616489 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Bacillus halodurans # 1 308 1 301 305 297 45.0 2e-80 MKRVSANKSREALPSIILGTMRIEGMKEAEVENLLENAIENGTNFVDTANCYGEKEGGVE SLLGKTFRKYPGLRDKIVLQSKGGITFYPDGRPFHNYSKEHLLRTLDASLERLGTDHLDY FLLHRSDPLFRPEEIAEAFEIMKESGKVLHFGVSNEVPTGIELMQKYCSVPIEVNQMQFS IVHADMCVQPVATNNHDFYAVDRDGGILNYCRLKEIQLQAWSPFQYGFIDGVFIDNPKYE KVNAAMEKVAERHGVSKTTIAVAWILRHPADMQVVCGTTKTERFKECCKACDVELSYEDW YEIYLAAGYPIM >gi|224461045|gb|GG657759.1| GENE 1057 1105392 - 1106222 882 276 aa, chain - ## HITS:1 COG:mlr7227 KEGG:ns NR:ns ## COG: mlr7227 COG0395 # Protein_GI_number: 13476021 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Mesorhizobium loti # 25 275 30 280 280 312 63.0 5e-85 MKTKVHTKAGLWAGLIAASLFSGLPVLWLLSSSFKSNVNIFAHPPKLIDGSFSLGAYISV LGDPEKVRFFLNSYGIAAVVVLCTLVIALLAAYGFSRFEFPGKKIINTVIISVQAVPPIT LLIPYLILIVRLGVYDSQLALVLTYVVFTLPYAILMMTGYMNTMPKELDEAVLIDGGTHW KALWRVLVPSSVPGMVSVGMYTFIQCWNEYLYALTLTKTNAIRTVPIGIASMMGQYAFEW NDIMAMSILGSLPVIVIALFFQKYFIAGMTAGAVKN >gi|224461045|gb|GG657759.1| GENE 1058 1106238 - 1107161 709 307 aa, chain - ## HITS:1 COG:mlr7226 KEGG:ns NR:ns ## COG: mlr7226 COG1175 # Protein_GI_number: 13476020 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 9 306 1 298 298 269 46.0 4e-72 MFDKTESRMLKKYRLPGRQMKGIYPYAYVAPVCILLLVLLFVPIGMVISYSFFDNVIVTD NPVWVGMANYSAILSDTVFARSIKNTVIFVVINVVFHMAIGMTLALMINARCLGKTAKAI FRIVFMLPWMFNATVIAILWKLLLNSHGVVNYLLSVLGVIAKPVEWLSDRSAALWVLTFI NIWAGYPFYMISILAGLQGISDDLYEAAGIDGANARQRFFYITIPQLKPILVSIAMLDFI WTTQNFSLIWLLTAGGPAHATEMMSTYVYKTAFQSFQYAKASAAAVLILAACVILAVFYV RNQTRRE >gi|224461045|gb|GG657759.1| GENE 1059 1107274 - 1108575 1531 433 aa, chain - ## HITS:1 COG:mlr7225 KEGG:ns NR:ns ## COG: mlr7225 COG1653 # Protein_GI_number: 13476019 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 42 402 26 386 415 251 38.0 3e-66 MMKKTVALFMTVLMVFSLAACGSGSDGKGDSKKEEDEKGGDSEVVLEFQQWFDNEMEEGY LQSICDDFYEETGIKIKLLSNPYADTKTQLEASAAAGTMADIVALDGGWIYDYAKQGLLA KLDGLYEDTGFDAKSVAEGTKVDKALYAQPIVNFPSMMAVNLDLLKSAGVDTLPETWSEF QEACEKVTDSGDNVYGFCSNMSTDNATSVEYLTAFAWNSGCSILTDDGKPFIADNEVLAD TCEFLKGLIDAKVTSPGIYTMTDADKVEEFTNGRVAFIADSVAHMSNIREQAPDMNFTYM NMPHKDDYSGDSYVRVNNWAVGIGENCKYKEEAAKFIEYLLSPEVNADLCIHANAFPANS EAEPQYEDDSDAFKAIYDVYMNSNGVAEYYSMPTAEALMSAFIDGLVMYFDGDYDDVNDM LSEVQTQFDAAYE >gi|224461045|gb|GG657759.1| GENE 1060 1108944 - 1110191 795 415 aa, chain + ## HITS:1 COG:no KEGG:Spirs_3399 NR:ns ## KEGG: Spirs_3399 # Name: not_defined # Def: hypothetical protein # Organism: S.smaragdinae # Pathway: Glycolysis / Gluconeogenesis [PATH:ssm00010]; Metabolic pathways [PATH:ssm01100]; Biosynthesis of secondary metabolites [PATH:ssm01110]; Microbial metabolism in diverse environments [PATH:ssm01120] # 2 396 3 397 400 285 38.0 2e-75 MRHYIAMGFQNTVDFELEWDPDILHSLIDSYQIHESEICCDVQIRSERDIIIALLGYMRS GTGGERFTSSDSIVRSFADRFSYEITLGGTPVRAAESMGRLGYRCCLHACSFNRYFRDLV SPTVDWITSVPDEGDAFHPHVIFQFPKGAHIKGNDIDFTVPRSNRAIFDYDLPSKRLMIN EDFRAMIKDAKVFLAAGYNVIEDKEVLKRRLNTTIQIMEELSPECITFYEDGGHEDISIG LLTIQTLAPHLDMLSLNEDELQGYVQHPVDITSAEEVAAAVKEMYEQAKVPLLICHSAYW ALAYGVQPRNVQEALEGGIWMASTRFRIGSRFTEQDYEDTKAIPARHSSIGFCRRLTSLL GEERLLCLPGLDLNHVGRPVTIGLGDAFIGGFLPGLLSEEEKKYIRTDRSAGKYQ >gi|224461045|gb|GG657759.1| GENE 1061 1110233 - 1111063 628 276 aa, chain - ## HITS:1 COG:no KEGG:Halsa_0172 NR:ns ## KEGG: Halsa_0172 # Name: not_defined # Def: xylose isomerase domain-containing protein TIM barrel # Organism: Halanaerobium_sapolanicus # Pathway: not_defined # 1 270 1 267 269 132 29.0 1e-29 MKNKIGFCEWVMPIKGPSVFAIAAGLGADGVQIDDWGSYSQSFPMAEKRIQHLYTEEAKK CGMEIASMGCNGFSRAGGLVNRLGTPEGDISLLAIRTGIRTCVEMNVPLLMLPCCWDGYL RTEADIENASEMLRTVCKEAEEKNVTVAVETVLSPKKLKEMSDYIGSTSFKIYYDTQNTQ YFAGACPSEELRQMDVSDIAEVHFKEGLADVQGCRCFGEGETGFEESAEVLCRGGYEGWL MIENFYRKPAFKSGCRDVYEAMKRDVETLRRAFALW >gi|224461045|gb|GG657759.1| GENE 1062 1111060 - 1112034 868 324 aa, chain - ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 313 5 313 317 294 46.0 2e-79 MGKILITASHYHELCADARELLESRGHELMINESALPYYTFQQLAEVVGNIDAAVVGLDE WTEEVFRMAPRLKVIAKFGVGTDNIDCDTAKEYGIKVINAPGQNSNAVAELTVGFMIQLL RNILPLYEGIRQGQWVRYIGGELKGKTVGLFGFGAVAKLVAKKLSSFETEVIACDLHPDS EYAKKYNVGLVSAEEVVERSDILSVHLPATSATYHLVDKAMISKMKRGACMINCARGAVV DTEALTEALKSGYLAGAALDAFETEPLPADSLLLTCDNVICTPHTGAETYEAYRNVSLCT AQGILDVLEGREPLYWVNRTGGTI >gi|224461045|gb|GG657759.1| GENE 1063 1112054 - 1112260 222 68 aa, chain - ## HITS:1 COG:no KEGG:ABC3607 NR:ns ## KEGG: ABC3607 # Name: not_defined # Def: dihydrodipicolinate synthase (EC:4.2.1.52) # Organism: B.clausii # Pathway: Lysine biosynthesis [PATH:bcl00300]; Metabolic pathways [PATH:bcl01100]; Biosynthesis of secondary metabolites [PATH:bcl01110]; Microbial metabolism in diverse environments [PATH:bcl01120] # 2 55 238 291 301 72 61.0 5e-12 MQKICVRFCDALRCGSNMSYFKEALKIRGIDVGGMRSPQLDLERQQTEALEKRLEILCND AGIPLKLF >gi|224461045|gb|GG657759.1| GENE 1064 1112383 - 1113408 692 341 aa, chain - ## HITS:1 COG:no KEGG:CPF_0647 NR:ns ## KEGG: CPF_0647 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 1 315 1 319 344 189 33.0 2e-46 MEIRKKRIAHLEKVYAVTAVRVDGREFCMAASENRGGTCLLIDPESEECFTVWNGPGGVM SLVPLKEEQAVLSIEGFYPVYDSKEAAVCKTVLAFRDGKLTTDKTELCRLPYVHRIGIVN GDGKTFLIASTLCNDKAYVEDWNHPGAVYVGEYVKGCPVSLTCLYEGLTKNHGMYIKEDN SCAHIFVGAAEGILHLCKAGAWSARLWKAGETSDVWLEDVDGDGNDEIAAIQGFHGDRIR FLRRQGERYCCIGELPVQFGHVLWAGELFGELYIIGGSRAGDKALSFYRVERKKKPVFVP VYCDFGTGAAQIAVVRGKRSARIFAASHGEDAVDMYTLSGN >gi|224461045|gb|GG657759.1| GENE 1065 1113419 - 1114324 604 301 aa, chain - ## HITS:1 COG:no KEGG:Tpen_0839 NR:ns ## KEGG: Tpen_0839 # Name: not_defined # Def: xylose isomerase domain-containing protein # Organism: T.pendens # Pathway: not_defined # 80 242 101 260 319 93 36.0 1e-17 MKLSERFYPSLLASECFYPYLDREEILLDAVEKILDEGYYRRLETGTLHSKRLRSRLADI VGRYGVGFTQWITSDLSAPGLNPSAADREVRRKTTDKIKKLVDMAAESGADRIAMVSGPD PGEKFREEASEGLEEVLQSVLEQVEKYPGMKLLLEPLDRGAHKNRLIGPSDEAVRLVRLA DMGRNECLLSWDSAHAALNGEHLKESLCTSASYLGHIHLANAVLNPELDGYGDWHMQMGE PGFLDVSCGAGILADAAAVLPGEEMYGVSVECRCPADTNPFINERDCRTFLKQVLDRDVN V >gi|224461045|gb|GG657759.1| GENE 1066 1114321 - 1114746 299 141 aa, chain - ## HITS:1 COG:NMA1818 KEGG:ns NR:ns ## COG: NMA1818 COG0537 # Protein_GI_number: 15794708 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Neisseria meningitidis Z2491 # 3 99 6 101 134 60 30.0 1e-09 MRCMYCEEGGPDLIRIRKVKRHTLYLHRDQTYPGRCILAAEQHIKKLTDLTAEEYTQLCR EMYTAAVILNRLFSPDKINYAILGDCSEHLHIHIVPKYKEKKNWGYLFEMNEEHPVLLEN EAYEAVRQRIIKELEREEAAL >gi|224461045|gb|GG657759.1| GENE 1067 1114743 - 1116269 1272 508 aa, chain - ## HITS:1 COG:BH2009 KEGG:ns NR:ns ## COG: BH2009 COG3333 # Protein_GI_number: 15614572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 23 493 24 491 504 373 44.0 1e-103 MSVFVDVFLNIMQPYHLFCVCGGVLIGILVGVMPGLSSVMGMSVTLPLTLSLDGYGGILM MLGIFCGAIYGGSITAILINTPGTANSAATCLDGHPMVTKLKQPGRALGISTTASLCGGV FSAFVLLWTAPLLAKVALKFSAPEYFALGVFGLSIVTSVSSRSIWKGILGAFLGLFLSTI GMDTINGTYRFTFDRIYLTGGINFVPVLIGLFALSQGLISVEEQYGKVKEKVKGKLERVL PTRADLKAIWKTILRSSILGSIIGAIPGTGGDIASWIGYNEAKRWSRHPERFGEGVPEGI AAPEAANNAVCGGALIPLLTLGIPGDACTAIMLGALMVQGIVPGPLLFVEQTDKVYTIII GLFIANIAMGILGYLGIRVFSKIVNVPNKLMVPIIFVFCFVGTYALNNNIYDVYLMIIAG FVGFFLLKLDFSIPPIILGMILGKTIENNFRRSLVMSNGNPLIFIQHPISLALLIIAFGA VFYPFIQPAIKRKLAGSRKRRDDRGDMS >gi|224461045|gb|GG657759.1| GENE 1068 1116287 - 1116742 570 151 aa, chain - ## HITS:1 COG:no KEGG:Spirs_0776 NR:ns ## KEGG: Spirs_0776 # Name: not_defined # Def: hypothetical protein # Organism: S.smaragdinae # Pathway: not_defined # 1 148 1 148 152 85 33.0 6e-16 MKKYNVGISVLMCMLAAGIFYFTKEFPKYYAGAPGSGFWPRVIAAGILIVSAVLLAETFI KKEEKSGPPIVYTSQGIKRVYILSGLIVLFGIGLQYLGLVIAALLFVPAVMFTLGEKRGI WLAAGGVGVTAAIYVIFAVGLHVVLPRAFFM >gi|224461045|gb|GG657759.1| GENE 1069 1116828 - 1117838 1160 336 aa, chain - ## HITS:1 COG:FN2103 KEGG:ns NR:ns ## COG: FN2103 COG3181 # Protein_GI_number: 19705393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 33 328 8 300 308 151 32.0 2e-36 MRKILSFVLILAMVGSLAAGCGKKEEKDASSDKKEGTELDYPKQNINTIIQFSAGGPTDL SVRAALDAAGPKLPSGVNFMASNVTGGAGLVGLNQVATSKTDGYTLGCINVDLAINYALG RTDMSPEDFVPLACSIGDPYALVVKSDAPYDTMEEFVEYVKAHPGEVSIGDSGVGAAPYL SAVAVADYFDLDYKQVSYDGSSDAVTAVVGGHIDGTYTQLSPAMGQLEAGGLKAIATLSN DRIEAWPDIPTVKETYPDVDFEILGWVFISAYKGTDPEICGYLEDVLGEAVKSEEFQTTL KELNMQNIPMTTEEAQEFIAEQLAFYKELCKDIKVE >gi|224461045|gb|GG657759.1| GENE 1070 1117868 - 1118632 221 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 248 1 238 242 89 27 6e-16 MAHGNFDLQGKVAIVTGATRGIGQGIALGLAQAGAHIVCVGRSDDTITRAGVEQLGRKYL NIRADMAQKESPDMIVRQTLEAFGRIDILVNAAGITRRAMAIDVTEEDWQDVLDVNLTAV FFMCQRVARQFIKQGGGGKIINIGSMTSYQGGIKVIPYTASKAAVRMITMHMCNEWAQYG IHINAIAPGYIETDMTAAMRSEPERMAETAPRIPMKRWGRPEDLAGAAVFLASDASDYVN GFTIAVDGGFLAKS >gi|224461045|gb|GG657759.1| GENE 1071 1118859 - 1119863 774 334 aa, chain + ## HITS:1 COG:BH3241 KEGG:ns NR:ns ## COG: BH3241 COG1609 # Protein_GI_number: 15615803 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 3 307 4 312 333 137 29.0 4e-32 MVTLKDVAKRAGVSIATVSRVMSNSDAVADKSRQRVLEAIEELGYYSNELARGLRQEKIN AVAVILPDISNPFFADMLRGIDDVLSTCNYFILFNNTDNNIKVEKKCLENMRSMALSGAL VYCCHKSLDGLADSLPANSDTVFLSEGGGLNADNIHFLSFSRKETAYAAARHLYDLKRQK LLLLLSSFQQNDSDFIDGIKKAAEETGGSYCTAYSSVNEKDASRVFSCAYSDEHPDGVIT ESDIQAMGVLSWLHTNEINVPGDISIVGLGNSSLAQCTQPRLTSAAPSGYQIGMAGANYL LNFIQKDSGNFLRDTKTLEQMLLPNIIVRGSSKW >gi|224461045|gb|GG657759.1| GENE 1072 1119857 - 1120783 862 308 aa, chain + ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 10 306 5 301 308 117 29.0 3e-26 MVEQTERPDILTLGVLNVDVVMELSHKIIGGKIIGNEISLNTGGHGCNQAIGIARRGVSV GILGKLGEDAFAVQIKDTLAKEGVCLNLLLDAHSTNTGLGIIMVEKEKKNTYIDFLGANY QMTPEDIDSFESYIKECKMVVIHLGFSTYGAALRLIELANKYGKTVVVNPSSSTDMEEAL LKQIDYLVLNYAKASSLLDMAIDNLKGARVAANLLLNQIKKAIFVQMDDQGVLVATQEEF TVLDAYSVSTTADMSGVTDFFTGVLSAELVNGAPLSFAAIKAHRAAMICAGKIGVYTAFP TKEEMDAI >gi|224461045|gb|GG657759.1| GENE 1073 1120793 - 1121347 502 184 aa, chain - ## HITS:1 COG:AGl2275 KEGG:ns NR:ns ## COG: AGl2275 COG3760 # Protein_GI_number: 15891247 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 170 11 160 169 85 32.0 5e-17 MILQNGRPACAAGREDKEMKVYDVLDGLGIEYSRTDHGPVGTIADCLEVDKVLGITICKN LFLCNRQKTAFYLLMLPGHKVLRTKELSAQIPTSRLSFASGEDMVRYMNVAPGSATVMGL IYDTDCSVQLLVDEEILQEEYVGCHPCVNTSSLKLRTEDVFGKFLAAVHHDYKTVTLSSD SPQS >gi|224461045|gb|GG657759.1| GENE 1074 1121541 - 1121876 281 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568961|ref|ZP_03777986.1| ## NR: gi|225568961|ref|ZP_03777986.1| hypothetical protein CLOHYLEM_05040 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05040 [Clostridium hylemonae DSM 15053] # 1 111 14 124 124 196 100.0 3e-49 MAELIAGAVFVFLTVICFIYGISAWNYRGPVLMNKYLLASAEEKRALAGQPEEEKKADYR YAAKISFGIAFMWFFAFLGIIADLRLIWISVLTAFVLAVYALSELFRNNRN >gi|224461045|gb|GG657759.1| GENE 1075 1121857 - 1122708 600 283 aa, chain - ## HITS:1 COG:AGc1709 KEGG:ns NR:ns ## COG: AGc1709 COG0789 # Protein_GI_number: 15888277 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 103 1 103 140 70 37.0 4e-12 MTIKEAEEATKLPRSNIRFYEKEGLVVPQRDSSNGYREYSRSDVENIRRIAYLRTLGFSI EMIRELMKGKRSLSKEVKRQAKILDSQIADMESARKLCGAMLKEKEIHFHDLDVERYVTD LEEQWKENPNVLRTDCAGFLYLWGGTVVWSVLLVLSMAAAFFSYSYLPSEIPVQWSGGTV SATAGREAIFAYPAACVVIRFLLRPFLWRWLYTHTVYSDSLTNYITNFLCFAALSVEIFT LLFLGGAVRHFPIVLLTDIIILAVTFLIGRRRMHRTTVNSDCS >gi|224461045|gb|GG657759.1| GENE 1076 1122933 - 1123814 879 293 aa, chain + ## HITS:1 COG:CAC3475 KEGG:ns NR:ns ## COG: CAC3475 COG0789 # Protein_GI_number: 15896713 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 130 3 129 243 125 56.0 1e-28 MKTISQVARLTGISTRTLQYYDEIDLLKPSELTPSGYRLYNDEALQKLQQILFFKELDFK LGEIKAILEEPGFDKIKAFKNQKNLLKLKRDRIDKLIGLLGRLEKGEQCMSFKEFDLSEY IEALETFKNEKTDDVIKYWGSVEKFNEFIRKIREDDGHMAELAIKQFGSIEKYTEAMKYN LEHFSELMEQANEIAERKDEILQHSDDLFTKLTSDMTRDITSEDIQSTVRDIIEFSQENN MGIDMGDGYWDMMIESYTHDTVREINDKKYGAGASDYIAAALRYYFHKEQPSE >gi|224461045|gb|GG657759.1| GENE 1077 1123826 - 1124590 668 254 aa, chain - ## HITS:1 COG:no KEGG:EF1959 NR:ns ## KEGG: EF1959 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 3 246 6 266 274 89 28.0 2e-16 MAKIFISYSSKNEKLVSCFLEFLQMGMGVNNSDIFCTAYSESFVTGETFIEKIREKLQEC EAVISLITEEYLESKFCLTEMGAAWGMSKQFFPLLLVSYADLSDTPLQGMEMRKLYSEDD MSRVYDELYDCGISQTHQTNEFRKRLPVFVRQTENFLKGEYVIEKDSLGYYEATVSSVRQ VKENYRCYGIKGHIAEPPDGEEAASDWLFYWRGVFPDLHVGEKVRFKTSKSKVNKFPDLG LARNIYPDDLQVLG >gi|224461045|gb|GG657759.1| GENE 1078 1124571 - 1126403 920 610 aa, chain - ## HITS:1 COG:MJ1220 KEGG:ns NR:ns ## COG: MJ1220 COG0286 # Protein_GI_number: 15669405 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Methanococcus jannaschii # 135 419 253 552 578 89 28.0 2e-17 MESLIGRYWKELQQKIVSEQVFYLFVMLIFSEGCRCMKGIAYSGKFTQKSFKMSFEDVYD YDFKVAVHRFSEKVDWVLVENDEEIQRILGDVENYISTYMRNDVCGKGEGITEKMDVLLQ AVLELEGWSGTYQSTPASVQKLVAELLSGSQAKHMLDLCCGTGLYGLTLYHKLSRENPAL TFCGIEVEPVLCDIADINLYLHGVERGRIVKTDLLALPRSTVEELADLIVMDIPRGNNVA ETYDRRDYRLIHFDKQHIYSDWIFIQDALYRLNVKGRAAVLATSGALIRLNEKGLREQIV LSDWLEAVITLPSNLYPRMGIGTELLIFNKNKRPERREKILFIDISSYYKIEKRNMCAVT EEGIYIAGKCYRHGTELSGISVMLKSTDLDADTCSFKPIQYIQLKEEERLDSNTTVEDIA DIIRGSQTLTKIAEQEKGTACFINIKDIQDGRIIYETAERIQEGHPAYKDKFRVSEDDIL LTSKGSVIKAAVVGANPPPAFISGNITLLRVDERKYDPYILLEYLYSGQGQLALERIQSG TTIRILSNASIKKMKVPEYDKELMKVIGKQLKQNRERYFSEQKRLTESYQKERQKLLEIL KEEKDGKDFY >gi|224461045|gb|GG657759.1| GENE 1079 1126522 - 1127523 1064 333 aa, chain - ## HITS:1 COG:BH1909 KEGG:ns NR:ns ## COG: BH1909 COG2972 # Protein_GI_number: 15614472 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 102 328 368 585 597 130 36.0 4e-30 MGLKTKKPSIYVCHAGLINIEIPLIYKNQCFGAITAGQVLCEDMEGYPADQISGRVDYSD SEELYEYYKEIKVLSRKQIEATTASLASICNYILQKFAYAQIQQDLAANREKLLLYEKQQ IELKHQLKMAQFDALQKQVTPHFIFNVINTISRLLSMKEYDTAAKMLDSFASMMRYSLLD VKSTVMLKQELNYIENFLMIQKIRFGDRIEYELECDPGLLDIEVPFFFLQPLVENSIKHG LLDKPEGGKVLLACAKVKDGCVITLEDNGTGIEAGKLHSIKENLLTTKGSRDSEHIGLYN CYNRLKLLFGSNMKFFIESESGKGTAIQIMFHL >gi|224461045|gb|GG657759.1| GENE 1080 1127551 - 1127739 201 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568968|ref|ZP_03777993.1| ## NR: gi|225568968|ref|ZP_03777993.1| hypothetical protein CLOHYLEM_05047 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05047 [Clostridium hylemonae DSM 15053] # 1 62 1 62 62 89 100.0 8e-17 MIFSDLHCIIEEEFQKEIEEFFAFSTGFGVVFVDNNGRHLGEGSNFTRFCRCINERPETA HY >gi|224461045|gb|GG657759.1| GENE 1081 1127736 - 1128482 453 248 aa, chain - ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 3 243 5 254 257 129 32.0 5e-30 MITILIAEDEQIEYRYLRDMFLKHPGMYRVLDNALTGRDAVDMALKYRPDVVIMDISMPV CNGLEASLIIKEKLPDTIIMLNTAYAEFEFARKAVEYHLDAYLLKPSSEEEIFRTLEGCL RKRQSTASSSTEADGGPDMCEKDCIEPVAEYIMEHLAEDLSLRTLSEQVHFSPSYLSHLF HEKRGMTIRHFINQKRIEYSVQLLRHSDKNIKEIASACGFSNISHFNRVFKLHTGKTPVE LRKENRNI >gi|224461045|gb|GG657759.1| GENE 1082 1128716 - 1129405 745 229 aa, chain + ## HITS:1 COG:SMc02412 KEGG:ns NR:ns ## COG: SMc02412 COG1335 # Protein_GI_number: 15966341 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Sinorhizobium meliloti # 9 225 9 218 222 223 52.0 2e-58 MRVNDRHVSFYYENDMDMGGITIDPAKTALLIIDMQHVFITRPAPEDPTEAEKNEALRWE PFYKKIDEVVVPNNQKLLECFREKGMEVCFAKIQCQKKNGSDRSLDQKATGYNELLLPPG TPSAEIVPALSPREDEIVVTKTTDSALTGTPLRLWFHNMGIDTVVVTGVLTDQCVSGTVR SLADESFNVWLIEDACMASTQRIQDNELEILNNIYCHVINTEELLDALK >gi|224461045|gb|GG657759.1| GENE 1083 1129418 - 1130785 1280 455 aa, chain + ## HITS:1 COG:BS_gabP KEGG:ns NR:ns ## COG: BS_gabP COG1113 # Protein_GI_number: 16077698 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Bacillus subtilis # 2 419 4 439 469 86 25.0 1e-16 MAQPKFKRNLSFISMIALASGAVIGGWLAEAPYWFSVTGAGAAFIFPILAVLLVPVGLAF AELTAMLPFASSVDIWTTSAFGHKAGWASQWMMFLIQVVEPPMMAFIFITAFQYFIPIPK GAQMWIAIGIVLLWYILSNFNIALTGKLANICFFSMIIMSLIVSMTLLFSGHWSADNLVG HGGFFPNGFKGIFIAMAVFSLKFIGFEMTPTMIEETNFPVSKMWKIILSALFVPAILYFI VVMAIGGMGSWSEIAQMGMPEPEFIRKFSLPGIVAILALVAGILHAFTTLMGFWTSSARV LYGAAQLNQLPQIFTRLNKKGQPYIANLVVLIFTVFFCIFSGDDWVQYIYAVSCIAAGLV YFVCCLDALILRRKHPEWERPYKVPCATVVFILGMIVSVWVIIGSCLELSAGGYISLVIY CLIGIAMYFIMSGYRKKNPEAHQLITLTPDDIEHE >gi|224461045|gb|GG657759.1| GENE 1084 1130866 - 1133118 2552 750 aa, chain - ## HITS:1 COG:SP2106 KEGG:ns NR:ns ## COG: SP2106 COG0058 # Protein_GI_number: 15901921 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 748 2 749 752 989 64.0 0 MDLKQKLEERLGTTLAQAEDAEVYYALLGLTKEISSQKKENSGNKKVYYISAEFLVGKLL SNNLINLGIYDEIQKLLKENGKSLAGIEELEPEPSLGNGGLGRLAACFMDSIATLGLDGA GIGLNYHYGLFRQLFEDHKQKEMKNPWIEKDSWLIDTGVHFPVSFRDYTLTSVMYDIDVP GYESGINKLHLFDVESLDESMVGDGIAFDKEDVRKNLTLFLYPDDSDEAGQLLRIYQQYF MVSSGAQLILKEMDEQGYDLHRLYDHVVIQINDTHPSMVIPELIRLMTERGISFDEAVEI VTKTCAYTNHTILAEALEKWPLSYLEKVVPHLVPIIRKLDERVKETYKDEKVAVIDRSGR VHMAHMDIHYGFSVNGVAALHTEILKRSELRPFYEIYPEKFNNKTNGITFRRWLMHCNPD LSSYITELIGDGWKKNASELEKLLAFAGDDKVLERLWEIKQVNKKRLKEYVKMTQGIDIS EASVFDIQIKRLHEYKRQQMNALFVIYKYKEIKAGRIPDIPVTVIFGAKAAPAYTLAKDI IHLILCLQELVGSDPDVAPYLKVVMIENYNVTKAEMLIPACDISEQISLASKEASGTGNM KFMLNGAVTLGTMDGANVEIHDLVGSDNIYIFGKSSEDVIRLYETNGYDAREYYESDPVT EGLVDFIISKEMIKLGDPENLCRLYKELVSKDWFMTLLDLKEYIAVKEQMLEDYKDRKSW TGKMLANIARAGFFSSDRTIEEYSRGIWGI >gi|224461045|gb|GG657759.1| GENE 1085 1133123 - 1134562 1364 479 aa, chain - ## HITS:1 COG:SP2107 KEGG:ns NR:ns ## COG: SP2107 COG1640 # Protein_GI_number: 15901922 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 466 32 495 505 451 48.0 1e-126 MDQLKEAGQSLWQILPLGPTSYGDSPYQSFSTFAGNPYYIDLNTLVEEGLLDKADCDGAD FGGSEETIDYGRLYETRFQVLKKACSRAAGQGLTETEEYRAFLKTEEEWLSDYALFMAVK NRFGGRSWDHWDKDIRFRVPEALAQYREALKEDVGFFEFLQYEFYKQWNSLKAYANDKGI QIIGDIPVYVAFDSADTWAQPSLFQLDENRLPKAVAGCPPDGFSATGQLWGNPLYDWEYH RKTGYSWWVRRIRHCFRLYDVTRIDHFRGFDEYYSIPYKDEDAVNGCWRKGPGMELFHAV KKELGDLPIIAEDLGFLTDSVRELLRASGYPGMKVLQFAFDSREESDYLPHNYERNCVVY TGTHDNDTLRGWYEALAPEDKEMALTYLNDRGTDEREIHWDYICLAMRSVADTCIIPMQD ILGLGREGRINTPSTLGGNWVWRMKEGAFTPGLAGKMRKLTEVYGRSVKIEKGSIKGDS >gi|224461045|gb|GG657759.1| GENE 1086 1134676 - 1135515 914 279 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 14 279 38 304 304 268 53.0 1e-71 MKTRKSPLSLAGTGVFTIIGVVYILPILIVLMNSFKEKVYINKQPFKLPDSKTLAGIENY ITAIDKYELLSAVGWTVFITVGSVFVILICTSMCAWYITRITSRFTKLIYLLCVFSMVVP FQMVMFTLSLVADRTGLRTPWGIIIIYLGFGAGLAVFMFCGFVKSIPLEIEEAAMIDGCT PLRTFFSVVLPIMKPTYISVGILETMWIWNDFLLPYLVLDLNKYKTISIAIQYMKGSYGR VDMGAVMAALILAVIPVIIFYLSCQKHIIKGVAAGAVKG >gi|224461045|gb|GG657759.1| GENE 1087 1135515 - 1136357 890 280 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 1 279 1 280 281 295 56.0 8e-80 MEKSIKRYMPIFVLPTFCAFILGFIIPFIMGIWLSFCKFTTVTDAKFAGISNYIKALKDT VFRHSFWYTALFAVASLIIINVIAFMLAMALTKEMHGTNIFRTVFFMPNLIGGIVLGYIW QLIFNGILSKYGTALALNEWYGFWGLIILVSWQQIGYMMIIYIAGLQSIPGDVMEAAQID GATGWQRLWKVTIPMMMPSITICMFLSITNGFKLFDQNLSLTAGEPAKMSEMMALNIFNT FYGRTGWEGVGQAKAVLFFLLVVAIGMIQLRATRSKEVQQ >gi|224461045|gb|GG657759.1| GENE 1088 1136430 - 1137728 1597 432 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 2 431 3 441 443 313 39.0 4e-85 MKMRKVVSVLLACAMVVGMAAGCSSSSDKKAKDGDAKGKVYYLNFKPEADEQWQDLAKKY TDETGVPVTVLTAASGEYEKTLKSEMAKTDAPTLFQVNGPVGLASWKDYCYDLKDSDIAG ELTDDSFALMDGDKMSGIAYVIENYGIIYNKELLKKAGYSADDITNFDSFKKVVEDITKN KDSLGFSAFTSAGMDGSSDWRFKTHLANLPIYYEYKDEGIDSTDAIKGTYLDNYRQIWDL YINNETCAPTEISTKTADDATADFVTEEAVFYQNGTWEYNNIADVGEDNLGILPIYIGVK GEEDQGVCTGTENYWCVNSKASEDDIKATLDFMKWCVTSDEGVEAMCKDMGFVIPFKANL ESDNVLVNEANKYLEEGKTPVSWNFSTMPSEEWKNGVGSALTAYAADQTDANWDKVVTAF VDGWAKEAAASK >gi|224461045|gb|GG657759.1| GENE 1089 1137856 - 1139136 1205 426 aa, chain - ## HITS:1 COG:BH3680 KEGG:ns NR:ns ## COG: BH3680 COG1653 # Protein_GI_number: 15616242 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 7 340 10 348 438 66 25.0 1e-10 MRYKKILSAALAGILLFGLAGCAQNKEKAGGETKKEIRIPMILTVDPSSGTKNEEDVVNA FNDAYEGTYKMDVEWILETEEEYRKNLKRLNVTDKLPAVITDLRMLPSFYEMMVQEGRLE NLAPYIDADKEWKDMIEPSVLRACSEPDGDIYLSPVSTAFFSCSGVFWNERLFEEAGIRE FPRTWEEFWACCEQLKAHGITPLALHTEGTAWAPMLLATAELADSEEGAAFMDELYPDSY QNDSGLRLAHTLKRLFSYTTEDALHTDFDVSYENFMSGKAAMVPNGYWMMDQVPEEFAAI VHFSPFPGNKLISSPETFGWAVVSGYSDSVKEGAIEFLKFRTGFNKKEKDTFLKGETAGT EQMMQDYIAAYSGSPQIVPNYQVKWNSLLQEETLGEYLPRLVKGQITEEEFTRMEDDSIR QFEEER >gi|224461045|gb|GG657759.1| GENE 1090 1139126 - 1140901 1915 591 aa, chain - ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 262 582 268 591 602 164 31.0 4e-40 MRKRKTSGIQKKYLMHTLALLILALLLSSIGVWVYVRKNMTSVIVDKYEFMNEKMGISLD NLYKKTDDVTAECITDDSVQKSLRTKGLENVEKSALSKYFAYIDLEHVAEYCYVDNKENV YTKSYSNISYEDFKESGFKDRLSGDYARTEWFFTGDTLFGTGEEALFIGRHVRSMDYAHA PGMLFFKMNEQFLQGLVEDEESMEEAAVGIVDSGGTFCMQNYPEGFSMTKADREEIVSLA GSGKSGIVSGGLRLQGGVLQAYRQKESGLTIFTIVPNSVLSRGLSQILLVLIGIYALVML IAVGVSLYVSRIFTRPIQKISEEMENFDGKDFSHKVDIHTDTELDKIGHSYNEMLVNIEQ LLNEIKKQEKELRTSELHVLINQINPHFLYNTLDTIYMLARMNGEEVTMKMIHALSSYLR LSLSKGNDIVTVADELENVKSYMEIQQIRNADLFNYEIDCQVEADKRWILKLILQPLVEN AIKHGFNDMFDGGFIRIEVKELQGRLSLTVFNNGTPMSREMVDKINALLKVPIVELKKSF PDKEHGYGIINIMTRLRLKYGEDVGFGYEVQEDGTKCCILLPGDGKQSDEI >gi|224461045|gb|GG657759.1| GENE 1091 1140898 - 1142487 1782 529 aa, chain - ## HITS:1 COG:BH1123 KEGG:ns NR:ns ## COG: BH1123 COG4753 # Protein_GI_number: 15613686 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 3 522 1 521 526 148 25.0 3e-35 MKLLKLVIVDDEPILLEGLLKTFDWNGMGFEVVGSARNGEQAIEVIKEKRPHVVLTDIRM KKISGLMVMEEIENLGMDCLFVVLSAYRDFEYAQQACDLGAYAYLLKPIADEKLMETMRG AWNVCMEQIRNEEKYDNWEKLLVKDSDSFLQVVVQKYVQDRIPVEKAEKVFDTLEAGLEK DDRFITVYADVDLTYKITNSLNYEAARFAMMQLLEENIGNLFPYWKMENEEGTYLFIVKT KDNRAVGELKDILEMAKVREHPVIAAISKPYKGITGIKRSCEEARKLFDIARMSGAGAFT IPEDMDDRTDRTNAVDTELLIVNAVRRNDEKELKEAFIYFIYGLPQEEEQQCQYMHKVML KTELMIEDSYGMTEELKKQFKNYYSNLQKLNAARAVDVCYKILCSAIEKRKDNAYSNETK YFKEYMSEAVAYIEEHLDEEDLSIVSVASHVYLNPVYFGRAFKNTFQMTFKKYLMKCRME RAKRLLEEGKTSIGNICETVGISNPSYFSHLFKQYTGKLPSEYKKEYEA >gi|224461045|gb|GG657759.1| GENE 1092 1142677 - 1143543 605 288 aa, chain - ## HITS:1 COG:SPy2153 KEGG:ns NR:ns ## COG: SPy2153 COG1284 # Protein_GI_number: 15675895 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 29 268 34 271 290 82 25.0 9e-16 MKKIKHTYVPLLFSCIMCSIAVNWVAVPNEFAVTGVTGLAMTVQKLTGIHYAAVSYFIAL LILVAALIVLGRGEISNIIFLSILYPAVLWAVSHVRLAVVFEEKLIAVALFGLIYGVGSG ITYRIGYSYGGMDTLGKILRKSVFKTWELRTIMLLADSVIMLIMLSAYSLDSLAYSFVGQ LIFVNSMNYVIFNWGPKMYEIQIVSDWTEDIESFVIQNIQKSLTLHTVKGGFSGENKVQM DCVCTSAEYIKLKEFITRNDHDCFIRVIPLMYVFGKHADFHKLADENL >gi|224461045|gb|GG657759.1| GENE 1093 1143530 - 1145197 995 555 aa, chain - ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 15 503 15 495 661 210 28.0 5e-54 MREAQTTVKKIRWAVFLPPWLLLIALLVLNLTNYDTFILVMDKITKWILTNFSWLFNSVT FIAVAVIVISYITPIKNVRFGGSKCRPMMKYTNYIWIILCTILAAGILLWACAEPMYHLY APPVNVAGGPGSGDAVVWAMQTVLLEWTFSPMAIYALPALLFAFVFYNMKQKFAISSMLA PTIGTKRAEKITPVVDSICLFALCAGMAASLGSGVLLLGGGLESLSGGGIQSSAGVWLVC GIVIIVAFVVSAASGVMNGIRILSTVNSRIYMIMGAFVFLAGPTAYLLDFMVESAGLFLN DFLKLSLWTSTSYGDGWSQNWPTFYWCCMLAWMPVSAVFIGRMSKGYSVKETIEVIFFFP SVFSFIWLVIFSGTAINFELAGYGVNEAMVNSGTAAATYAVFERLPLQIIMIPLFLLIVF VSFVTAADSNTNAMSGLCTEGLTVDDTESPVILKIVWGLTIGALCIIMLVAFDVEGLKKL SNLGGFPSAFLMIFCIVGWIKIMRNPKKYDLNKMDYEEDGRPIKSERLLEENYNPDKKSF LEKIFGKRSKTGEKD >gi|224461045|gb|GG657759.1| GENE 1094 1145163 - 1145600 269 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225568982|ref|ZP_03778007.1| ## NR: gi|225568982|ref|ZP_03778007.1| hypothetical protein CLOHYLEM_05061 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05061 [Clostridium hylemonae DSM 15053] # 1 145 38 182 182 291 99.0 2e-77 MAVCAASTTVMYARQPQYIGYSFLALLCVLMMFGVWYVPVLKAKKGAGKVSRTGGNYELK LRKEGYLELKKGQKIYLNGDKDVRACETELVFAIRPNREMTFCIPKRIMNADEIIFVREV LKLKIKHFQRKEGVYERGTDNCKED >gi|224461045|gb|GG657759.1| GENE 1095 1145734 - 1147179 1187 481 aa, chain - ## HITS:1 COG:ygcE KEGG:ns NR:ns ## COG: ygcE COG1070 # Protein_GI_number: 16130683 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 4 480 1 477 492 639 61.0 0 MVVMQEKYIIGIDVGSQSAKVYIFDLDGNVIAEGREKLRAMYMSDPGIVEHPDDDLWDAL CAAGQKVMKKFTGRPDRIIGIGLGGIRCCRVLLKEDGMLAAPVISWMDDRTSRPYEHADP DVAYVTSVSGYLGCRLTGAFKDCIGNNFGQWPVDYDKWDWSEDEDMQKQYNLPRKMLFDP VLPGSVLGMVTEEAHKAAGFPKGIPVVCTTSDKAVEGLGSGLVNDETAVISLGTYITLMI QGEKMPEDPKALWAILSSIPYKYIYESYGIRRGMWTVSWFRDLFGEGLIREAAGQGLTPE ELLNKKAEAVPPGSDGLMTVLDWLANAWEPYKRGVMIGFGAHMNEAFMYRSILEGIAYTM KNNCDAMCEELGKELNEIVISGGGSGSDLFMQIFADVFNLPAKRNVMNGSAGIGAAINTA VAIGEYSNYEEAVKHMVKVRDVFYPIKENVELYHRLNKQVYCNITKHTDEVLKATYEILN K >gi|224461045|gb|GG657759.1| GENE 1096 1147255 - 1148031 682 258 aa, chain - ## HITS:1 COG:ECs3630 KEGG:ns NR:ns ## COG: ECs3630 COG1028 # Protein_GI_number: 15832884 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 6 258 34 286 286 352 62.0 3e-97 MQITDFNMDYFSLKGKNAIVTGGNTGLGQAFSLALAKGGANIFMPSIMPDDPQYNKLIEA EGGKAVYMEADITKPGVPEKVVEACVKELGSVDILVNCAGIVICKDVLDFGREDWDPMIR INLTAAFEMSHECAKVMIPRRSGKMINICSMFSFLGGQWSPAYAASKHGIAGLTKAYCDE LAQYNIQVNGIAPGYFKTKVAEVSASDPVRDKWIVDHTAEGRWGEIHDLMGTTVFLASQA SQFVNGHILAVDGGFLTR >gi|224461045|gb|GG657759.1| GENE 1097 1148050 - 1148988 737 312 aa, chain - ## HITS:1 COG:CAC2709 KEGG:ns NR:ns ## COG: CAC2709 COG2025 # Protein_GI_number: 15895966 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 70 310 83 332 336 147 35.0 3e-35 MKNKIMIYLDQEYPNESAQLLEIIEKAYNKNEMITYAAGWVEEKQVPCWFDHLLLLPPDE RSRYDARWMASVLEQMCREHEFCCVIIPSTWTGRMLAPLLAVKLESGLTADITDIETLDD KLLMIRPAFSGKVMAKITSKDSQVIMMSARLGAFSYTGLQQKKMQTEPYLFQEPIRSGIR QLGREDKKQTADIREAEVLISGGGGVGRRFDQLYPLSKRLNAMVSASRKSVDSGMASRSI QVGQSGKIVSPQLYIALGIYGSMQHIEGLKDIPYIISVNINKNAPICSLSDIVVEGDAIE FVTKLLERIKKE >gi|224461045|gb|GG657759.1| GENE 1098 1148978 - 1149790 487 270 aa, chain - ## HITS:1 COG:CAC2710 KEGG:ns NR:ns ## COG: CAC2710 COG2086 # Protein_GI_number: 15895967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Clostridium acetobutylicum # 7 267 4 259 259 132 34.0 1e-30 MVIQVRVICLVKFVPDVEAFQYDSEKKQLIRENVKTIINPDDASALAATLRLKKQYGLSV ELVTMGPVSVKPKLRDYIRIGADKAVLISDAAYSGSDTYATSLILGDYLRQAKADIILTG THTIDGDTAHVPAQIAERIDYSFLSGITKLEEQCMKDHTILCSVESDECILHYSLELPAL LAVSRESRYSPPYVSYADLDRYVDDKIEVVTNAGLNIHEERIGLKGSRTRVVDTYTKALE TRQRTIVSTDDEGIEYVYQFLKEKGFVDEE >gi|224461045|gb|GG657759.1| GENE 1099 1149795 - 1150982 799 395 aa, chain - ## HITS:1 COG:yqcE KEGG:ns NR:ns ## COG: yqcE COG0477 # Protein_GI_number: 16130682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 390 25 412 425 142 28.0 8e-34 MLYLRTNYQETMLEVFNMTLPQLNTVMSALGIAFTIGYLPSGIIADKFSAKKLVLVSLFG IAVGGFWFAQIPSYTSVIIIYAIWGFSAVLTFWSAHMKVVKMLASKGEEGRFFGILDGGR GVVEAILASVAVFIFARILGSATAIADKRSAMVAVIYLYSIVALVIGILVAVFVKENTSA DNEVKEAAENEKFRFSDLGTLFKNKSIFIMAGIIFMSYAVTYTVYYFSGFLQTNVGVGPV AVSTIATVLLWMRPIGGIIGGFIADKFGKAKTVLLTLLCASALLVVISVIPYTSGQTVFC ALIFILGFFIYAVRGTYWSLLGDCGVETKITGTAIGFSSLIGYLPEIFVPMISSFMFTAY GDKGGYSGFFISIAIAGAVGAVLLVLFMKVTGKKK >gi|224461045|gb|GG657759.1| GENE 1100 1151078 - 1152547 842 489 aa, chain - ## HITS:1 COG:ECs3629 KEGG:ns NR:ns ## COG: ECs3629 COG0277 # Protein_GI_number: 15832883 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 1 484 3 484 484 579 57.0 1e-165 MTKTELLEGLRGILEEDQINLDEEALYDAAADRYKKYAKAKKVLDVPIPMAIVYPDTTDE VKKILQFCNNNGVNVIPRSGKTATEGGLENWKECTVVVDANRMKKIIKIDTYNMQATVQA GVQLQTLEDELRKLGYTTGHSPQSKPVAEFGGLVATRSIGQFSTLYGGIEDMVAGLECVF PDGHISRIKNVSRRAGGPDIRHIVIGNEGTLCYITEVTVKIFKFYPENNKFYGYLVKDID TGIKVLREVVVNGFKPSVARVYSEEDARQHFYHFHKGKCVLLFMAEGPAGIVEATGAEIE KAVEKYQSGIIEPVDASLIEEWFNHLNWSQQDLDDERQSMIDNDRHDGFTTEVSADWETI PKIYYNVIERIKKEFPRVDDLTMLGGHSSHSYINGTNMYFVYNYNINCNPEDEMRIYHHP LQRIIVEETLKEGGSMCHHHGIGKYRNEWTKEEHGSAYYMLEKLKEAFDPNGIMNFGTIF PQEEGKKYQ >gi|224461045|gb|GG657759.1| GENE 1101 1152793 - 1153524 309 243 aa, chain + ## HITS:1 COG:L47971 KEGG:ns NR:ns ## COG: L47971 COG1737 # Protein_GI_number: 15673967 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 8 189 3 195 244 60 27.0 4e-09 MQYFNTDNLNEFEKRILETLNLECKKNKKLRIINAAELCGCSTSKISKTVKKLGFNNYKQ YVNFINDEYIPEKPASNEFDRIRDFLDNFDLTMVDKFIELLDKHDKILLFGYGPSLFCAQ YLEFKLRLFINKTVITITDEFSAASLIDEKTLLIIFSATGGFSSFDNLKKIAREKGGDLL LLIEEYNTSALSDDCQVLFLTDTFQTFTTVPYQKSRIVFFIFIEEVIQHIIKRNENNAVS SGK >gi|224461045|gb|GG657759.1| GENE 1102 1153541 - 1154125 486 194 aa, chain - ## HITS:1 COG:BH0719 KEGG:ns NR:ns ## COG: BH0719 COG1309 # Protein_GI_number: 15613282 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 1 181 3 183 188 99 31.0 3e-21 MKDDKRKRLSVELLKQALIELLQKKDMDRISIKELCETAGINRSTFYTYYDTQHELLEEI EDDILKELIVRFQNLSPETGLQEVIDSVRTCLRYVERNIDSFRALLGEHGDRAFSEKMIA ANEAVIREWSSFGSADPDAEKTAYLFATCGGTSVIKNWIMDDDRMSAAQLSKLLGTLICK GYMGIFLSDPDKNM >gi|224461045|gb|GG657759.1| GENE 1103 1154299 - 1155066 758 255 aa, chain + ## HITS:1 COG:TM1724 KEGG:ns NR:ns ## COG: TM1724 COG1028 # Protein_GI_number: 15644471 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Thermotoga maritima # 4 252 2 246 246 127 32.0 2e-29 MEKKLDNKVVLLTGASKGLGREMAVYLASEGAKLAICARTRDQLEETAKMCTDAGSEAVP VVCDVSDREQLRNFVSTAAEHFGRIDALINNAAYKYSNAPFLEQTEEDLLNAFSSGLFAV WDSMRLCFPYMKEKGGAIVNILSATYAEAIYGEASSNADKGGIRSLSMAAARDWGRHNIR VNTIAPDLRKTFYENVPEEFNDWVQTRETHFATAAGIEGNPKSVGAAAAFLISDDSQWIT GQNITVDGGRCILFI >gi|224461045|gb|GG657759.1| GENE 1104 1155117 - 1155890 906 257 aa, chain + ## HITS:1 COG:mll5540 KEGG:ns NR:ns ## COG: mll5540 COG1028 # Protein_GI_number: 13474619 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 5 257 6 251 253 121 32.0 1e-27 MFEDLKGKVVLLTGASMGLGRQQAIYFYKLGMKVSICARREEKLLEVVELCKETGADGEI MEVPCDISNYDQLKNYVDKTVERFGTIDFLVNNANKEALLMPLDEQPDDILKKDIFVGCM AHWRLMKLCVPYMKGKKASIINYASGNYQLGMDGMASYDADKGAIRGLAMVAARELGQYG IRVNTVGPAAVTDTVLNNTPPEYRDWVIRCSSCNSLRRVGLPETDIPPVVAWLMSETSGW VSGQNINIDGGSCIYGM >gi|224461045|gb|GG657759.1| GENE 1105 1156160 - 1156534 273 124 aa, chain - ## HITS:1 COG:no KEGG:CLM_1089 NR:ns ## KEGG: CLM_1089 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A2 # Pathway: not_defined # 4 121 6 125 126 79 33.0 5e-14 MFAFLLVCSLLVPISMIVLGKRWEKKPPADRNGLSGYRSTMSRLNQDTWSYAHKLWGKIN FTTGIALAVLSFAFIVYIKDWSDFETWIVYLVFIQIAIMALTIIPTEIKLNKTFTKKGGR KQNG >gi|224461045|gb|GG657759.1| GENE 1106 1156957 - 1157469 181 170 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116511598|ref|YP_808814.1| acetyltransferase [Lactococcus lactis subsp. cremoris SK11] # 1 150 14 158 185 74 31 2e-11 METERLILRKIHQDDINEIFNCWMQDEDVSRYMYWKASNDISDTKKFVEFELGKIADDKW NRWIIILKETSKIIGTCLIYFNEDENNWDISYNLGKKFWGKGYISEAMSTVMKYAKEVLK VKECIAIHATENLASGRIIKNLGFVYVKDVPYECSGGDIITTGRFYKCVF >gi|224461045|gb|GG657759.1| GENE 1107 1158916 - 1159107 218 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLQSTLPKWVETEEKQIFELTYLVLQSTLPKWVETRAQLASVNAYELLQSTLPKWVETPV KRG >gi|224461045|gb|GG657759.1| GENE 1108 1159454 - 1159651 283 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568999|ref|ZP_03778024.1| ## NR: gi|225568999|ref|ZP_03778024.1| hypothetical protein CLOHYLEM_05078 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05078 [Clostridium hylemonae DSM 15053] # 1 65 1 65 65 100 100.0 5e-20 MLQSTLPKWVETEKIYLSERDIMLQSTLPKWVETYNRFISVVILVLQSTLPKWVETQAAI FMKAV >gi|224461045|gb|GG657759.1| GENE 1109 1159942 - 1160232 178 96 aa, chain - ## HITS:1 COG:BH0342 KEGG:ns NR:ns ## COG: BH0342 COG1343 # Protein_GI_number: 15612905 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 96 1 96 96 117 62.0 4e-27 MLVLITYDVNTETEAGKRRLRKVAKQCVNYGQRVQNSVFECNLDAAKYRQVKAILEDIVD KSKDSLRFYNLGDKYKNKVEHIGAKKSFDVTDTLIF >gi|224461045|gb|GG657759.1| GENE 1110 1160241 - 1161260 637 339 aa, chain - ## HITS:1 COG:BH0341 KEGG:ns NR:ns ## COG: BH0341 COG1518 # Protein_GI_number: 15612904 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 339 5 343 343 483 67.0 1e-136 MNTLYVTSTNRYLFLDGENVVILEDQEEIGRVPLHNLEGIVTFGYTGASPALMGACAERN IDLSFMSGNGRFLARVSGEVRGNVTLRKEQYRISEQKKESIKIARNFITGKVYNAKWVLE RAARDYPLRLDVDRIKEKSAFMSGNLPKIRECEDAERLLGIEGESASLYFSVFDELILQQ KDEFSFGGRNKRPPLDNVNAMLSFAYTLLTGMCASALESVGLDPYVGFYHTDRPGRVSLA LDLMEELRSVMADRFVLTLINKKIIGASGFSKKESGAVIMDDDTRRQFLSHWQDKKKETI THPFLAEKMEWGLVPYVQAMLLARYIRGDLDEYPPFLWK >gi|224461045|gb|GG657759.1| GENE 1111 1161274 - 1161933 286 219 aa, chain - ## HITS:1 COG:SPy1563 KEGG:ns NR:ns ## COG: SPy1563 COG1468 # Protein_GI_number: 15675455 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 219 2 221 224 204 46.0 1e-52 MYNEEEYLQLSGIQHFAFCRRQWALAYIELQWSENVRTVEGKLLHEKAHDVTSEEKRGDL IISRAMPIHSRELGVSGECDIVEFHRSGTGITLSGRDGTYEAVPIEYKRGSPKQNDVDIL QLTAQAMCLEEMLCCEIPYGYLYYGETRHRSKVVFEESIRQKVRDSFREMHQYYERRYTP RVKRTRSCNACSLKDFCLPVLGVGKSASSYIDKALSQED >gi|224461045|gb|GG657759.1| GENE 1112 1161926 - 1162786 641 286 aa, chain - ## HITS:1 COG:BH0339 KEGG:ns NR:ns ## COG: BH0339 COG3649 # Protein_GI_number: 15612902 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 276 1 274 283 348 61.0 1e-95 MSSLKGKIDFVAVVSATDANPNGDPLNGNRPRENYDGFGEISDVCIKRKIRNRFQDLGQK VFVQSDERSDDGFKSLKERADGCEELAKEIKNGKGADREACAEIACKEWLDVRAFGQVFA FKGNDVSLGIRGPVSIHQAVSCSPVDIISTQITKSVNSEPGKGGKASDTMGMKHRIGFGL YLIKGSVNVQLAEKTGFSQEDADILKESLKTLFENDASSARPEGSMEVCDLYWWQHEAKT PAVSSAKIHRSVKVEALNERPKSYADYKITLEPAEGCVKAEEYHFV >gi|224461045|gb|GG657759.1| GENE 1113 1162788 - 1164752 1282 654 aa, chain - ## HITS:1 COG:no KEGG:Dtox_3649 NR:ns ## KEGG: Dtox_3649 # Name: not_defined # Def: CRISPR-associated protein, Csd1 family # Organism: D.acetoxidans # Pathway: not_defined # 1 650 1 621 642 416 38.0 1e-114 MNWTNELLDLYEKNQDIAGEVTYKTIKGKKGEEHIPLILLPVFHTTVTAQIEVTIDESGE FLSAKAVDKAENLTMIPVTEKSLSRTAGTEPHPLCDNLKYLAGDYMVYYRQGKKQKDYSE NYRLYMEALQRWHESPFTHKKVDAIYAYVCKGCMIKDLATQGVMALDDEGKMTGDEKIQN VAQADAFVRFRVESILDAGADILADTSGQYCAECWLDKTLQEAYIQYYTSMLPEKDLCYL TGKREAISYLQPKKIRNEGDGAKLISANDESNFTFRGRFSDKTQAFAIGYETSQKIHNAL KWIIRKQGYSWDGLYAVIWESGMNPLPTWSADTDTITDEYFNQKDWDEDELPESETGEVQ ASGFCSAMRGYGKKFGDTSRIVFLAFDAATTGRLAMTEYKTFESSRFLENLTYWYETCRW QQVKYKEGHKYDYLGMAGVNEIAEALYGTEQNGKLTLNNKRMYAQVCKRILPCISERRKI PVDMVRQAVQKASSPVVYEKRYNWEAVLGIACAMVKKERREQKKEDWNMALDKECKNRDY LYGRLLAVADRIERRTFDREEDAGRETNADRLMNAFSQHPYRTWQTIEQRIHPYLKKLDI RERNYYKKMLDEICEMFNIDSFADNSRLEGIYLLGYHSQLNEMRYQKTEEIKED >gi|224461045|gb|GG657759.1| GENE 1114 1164736 - 1165485 569 249 aa, chain - ## HITS:1 COG:no KEGG:Rumal_1130 NR:ns ## KEGG: Rumal_1130 # Name: not_defined # Def: Cas5 family CRISPR-associated protein # Organism: R.albus # Pathway: not_defined # 2 235 3 236 249 335 69.0 8e-91 MKYRNTVEFQVEGAYALFADPITRVGGEKCSYHIPTYEALKGILHSIYWKPTLIWVIDAV RVLNPIQTETKGRKPINYNGGNDLSYYTYLKEVKYQVRAHFEWNENRPELTNDRNEHKHH NIAKRMIERGGRRDVFLGVRECQGYVSTCVFGEGKGYYDDVPGEIGYGFMYHGITYADEA VCEEDKGKMTARFWYPVMKQGVIEFVRPEECAEKRHLKEMEMKSFGEDMHNFTGLKEFEG EEGACELDK >gi|224461045|gb|GG657759.1| GENE 1115 1165500 - 1167917 972 805 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 5 805 2 800 800 394 34.0 1e-109 MEDPYIAHFREENGQITVQSVLEHNSNVAFLAEQNSSIEILSPIAGLIGTYHDAGKYLDA FQQYIEKNIEGKKTHRGEVNHSTAGGCLLEQFAAGTMETQMMEFPVYCHHGLSDALSGNG KILIDERLRQRENVQCVSERFYQFHDKQELENKFYESRKKIGEILTALHKYAQSLTQGER SLQKNFFVGMYERILLSLLIDADWSDTACFMENKKIEERIQKNHGRNRIWDECKRYFDVY MSRFSKDSKLSGMRTEILRQCLLQGKTDGTLYRLTVPTGSGKTLSSLGFALNHARVHHKK HIIYVAPYTSILEQNAEEIRKATGNPEIVLEHHSNIFYEGEEEQRRKELLAENWSSPIIV TTAVQFLNTLFSSSSKNIRRMNNICNSVIIFDEIQALPVRTIKLFNLAVNFLTGFGESTV VLCSATQPLLDRIMECSLNRPQNMIEPDKKYEDAFQRTTIHDKTKLTNLGLSAEELGEFI LDRAQEEERVLAIVNTKKCAEATYKYLKKKCKDSDYLLFHLSTNMCPQNRQDVLNEIKEK LFEADRKIICVTTQLIEAGVDISFRCVIRSLAGLDSIVQAAGRCNRNKEVENGNVYVIKM SKEAENVSGLRDIVKAQEAMLSVLYQFEMRPSSFNDRLDSGKAIELYYSLYMSSRKEEMS YLVSADGRSDTLLNLLSTNSKVWSAVKRNNKDGHTFLRQAFKTAGDLFEVIPEDGKVDVV VEYDTAAKEQIRILCGQYVTLDEQQQAVRKLQKYTVGISDRMRQQLSNAVTTVCDDKRKI LVLSENYYSHETGVSIEPVMEFINY >gi|224461045|gb|GG657759.1| GENE 1116 1168131 - 1168802 476 223 aa, chain - ## HITS:1 COG:no KEGG:Closa_0515 NR:ns ## KEGG: Closa_0515 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 25 223 9 208 260 129 38.0 1e-28 MKARTGAYSYCTFPGLQAEVLILGNNIIIRILTRIFDLMILNILWLVCSVGIITIGASTT ALYSVMLKIVRNEEGYIVRDFFKAFRENFRQSTVIWMVLLAVGMLLLADTAILHRMQGGA GLIGTMVFYIIVFFYFMEIIFVFPLIAKFENTTGSMIKNAILIPASRLPYAVMVLVMTGA CVLLTFLDHRTIIAGIGIWSVIGAALLSYVNCFLIMKIFEPYL >gi|224461045|gb|GG657759.1| GENE 1117 1168811 - 1169791 1136 326 aa, chain - ## HITS:1 COG:STM3601 KEGG:ns NR:ns ## COG: STM3601 COG2222 # Protein_GI_number: 16766887 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Salmonella typhimurium LT2 # 1 326 2 325 325 236 39.0 4e-62 MEIRKIIETIVKDREACGGIKNVVWLAAGGSNGGNYPAQYFMDREAKGIRSQMFTSNEFV YAPPKFVGENTIAVVTSMRGTPETCVAAKVAKELGAATIGLYVQESLLTETCDYNVKYDS IMFDESDQSKTNAALGMRIAMDIVDVTEGYEHYKDAMAAYDILDKVYNDAKAYCMPLAEK WAEQNKEEHTISVMASGPAYAAGYIFSICNIMEMLQIQSPTINCCEFFHGPFEVLDKNES FFLLVSEGRTRKADERAVKFLREYGGDKIYILDAKELGINRFKDSVAEYFNHMLFSPILN NTYMKKLSAATKIDYLTRRYMWKVQY >gi|224461045|gb|GG657759.1| GENE 1118 1169803 - 1170639 663 278 aa, chain - ## HITS:1 COG:CAC3499 KEGG:ns NR:ns ## COG: CAC3499 COG1082 # Protein_GI_number: 15896736 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Clostridium acetobutylicum # 13 276 7 268 271 126 28.0 4e-29 MKHLKESQILTSNYPYYKYSLDYSLKSLQRMGAGPIEFYACYPHFHLDDVSYWDVKRITK KLADAGLNVVCFTPEQCMYPVNIAALDVNARKRSLDIFKKSIRYGAEMGAEFVVTLAGYG TLDEEESCAWRRSAESLGILGDLAESCGVKLVLETSPREYTTTHNSKDVVRMIHETGSSA VKGMIDTATLGFSGETMEQAVEDLEGQLAHVHVADGIPNGHLVLGEGRLDIQHMLKKLDD AAYKGPLSLEILNDKYIRTPHEAMETSFKRLKEYINNC >gi|224461045|gb|GG657759.1| GENE 1119 1170649 - 1171470 924 273 aa, chain - ## HITS:1 COG:BS_yurM KEGG:ns NR:ns ## COG: BS_yurM COG0395 # Protein_GI_number: 16080311 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 5 273 32 300 300 225 42.0 7e-59 MKKTVTHAAAYIFFVLFAIIIILPLVWMIVTGFKTNQELFLSPFSLPGQWMWENYVDAWK QGIGIYLSNSVIITVAATVLSTFVSCLAAYPLARLNFKAKKLWIYIILGGLMLAPQSSVI SLFKMVKIAGLYDTRTSLILIDAAFRIPFATFLIMTFYKSISYSLDESAYMDGATTWQIF CKIIAPLSKPIIASCAIVSFRAVWNELMFANIMLQSTAKKTVPVGLMNFQGMTTTNWTLV VASMVIASLPLVIAFLLLQKQFVRGLTAGSVKG >gi|224461045|gb|GG657759.1| GENE 1120 1171482 - 1172363 898 293 aa, chain - ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 1 293 1 292 292 237 41.0 2e-62 MRKKNQKTIGLYLFPALLMVIVILYLPIFINLYESFFSWGAMSTRHDFVGLANYIKMFKD EVFYVALKNNLIFTVMSVIFQIGIALIIANVLECKFMRKTQNFFRSIYFVPSLLMVTVVG IAFKMIASPSIGVINPLLEWIGIDASKIDLLGNAGSATFAIAAMSQWQYVGYTVILFIVA IQNIPAELYEAADIDGANAVKKFFYITVPEIKDTILINTIITVTGSIREYDEVFVTTNGG PGYASETLATYLYKAGFRNDQMGYASALAFFIFIVTFIIGLAQMRGYRLDDQQ >gi|224461045|gb|GG657759.1| GENE 1121 1172420 - 1173115 648 231 aa, chain - ## HITS:1 COG:BS_yurO KEGG:ns NR:ns ## COG: BS_yurO COG1653 # Protein_GI_number: 16080313 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 3 231 201 422 422 130 35.0 3e-30 MWYVGQFNASYVDAGTRTDDYNPSSGEFTDPGYVKSVQTFLDLNDNGYLGTNVNSKDYYQ VREEFAAGMYGMILDATSQFSFYTDAMGDDGYGYFKIPIPTDAAGDEASTIVTGGSENYA VSADCKHPDEAVEFLKFMTSKEQALKQTKETGLPNALIGGITAENSDPVIAAAYETAEDY TAIAEWLDQCVDGNVANTYMASLQEGLDGKSAQDIVKDVQKAAKDAADSSK >gi|224461045|gb|GG657759.1| GENE 1122 1173247 - 1173783 561 178 aa, chain - ## HITS:1 COG:BS_yurO KEGG:ns NR:ns ## COG: BS_yurO COG1653 # Protein_GI_number: 16080313 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 3 176 2 174 422 134 35.0 1e-31 MKRRILAVVMMMAVTVSLIAGCGGKDKDAGDGKIKLTFLDKHPEDEYKGYFEQAVADFEE AHPDVDIEYENISDQAIKEKLSVLAAGGDLPDIFFAWGGECLNRFSRAGRTLDLTPYMEE DPKWRDSFLPSFLSSSVYEDKNYAVPYRSSVLYMLYNKKVFADNNLEVPETWDEFLAS >gi|224461045|gb|GG657759.1| GENE 1123 1173813 - 1174700 754 295 aa, chain - ## HITS:1 COG:CAC3498 KEGG:ns NR:ns ## COG: CAC3498 COG0524 # Protein_GI_number: 15896735 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Clostridium acetobutylicum # 6 281 5 286 295 165 33.0 8e-41 MGDKPRILGIGIATMDIYCHQRRMYPGGNEYNIAYNAGLLGADAGFMGVFADDMAGSILE QTLLDAGIDTSHSHHEKGSSGYALVDLKDGDRVFLDWNKKGVTDLYPFTFTEEEITYIKT YDIACISWGARVDKSRMKKLAGAGVPICYDFYDNFTAEDIDSISPYIKFAFFSCSHMSEE ETKNILAACVRLGVRIAVGTRGGEPAIACDGSRFYTQEVFRVKAKDTMGAGDSYISAFLT NYLSAEADESFTAEDKITASLKKAAEFAAAVVVKDGSLGVGYDVDPNDLSKIINL >gi|224461045|gb|GG657759.1| GENE 1124 1174897 - 1175625 845 242 aa, chain - ## HITS:1 COG:CAC3502 KEGG:ns NR:ns ## COG: CAC3502 COG2188 # Protein_GI_number: 15896739 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 9 238 8 236 237 133 36.0 3e-31 MSAIEKANATPLYLQLKNKIKKEIRTGILKPGDKLPSESQMQQEYNMSRVTVRNAMEELT GEGYIIKVQGKGSFVAHTDMLRLPIGVTSFTEDAKMQGITLTSKVIKFGIEDIQTELDRR FFGDKTDGRILVLKRVRSADGVPVTIEENHMSPDLIDMKEEDLTGSYYDILINKYHMIPS NKGRRSVRITFADKEAAEYLDLSLGTPVIESEMCVFDMNGDAIHTVKDIVRGDNDRFLTW YV >gi|224461045|gb|GG657759.1| GENE 1125 1175713 - 1176189 110 158 aa, chain - ## HITS:1 COG:no KEGG:Mlab_1736 NR:ns ## KEGG: Mlab_1736 # Name: not_defined # Def: hypothetical protein # Organism: M.labreanum # Pathway: not_defined # 1 158 81 231 234 117 39.0 1e-25 MTSPSYVFHATGATKALLDHFAYRWMPHRPASEMFGKRAVIITQCLGSGAKSAAKDIKHS LSWWGISKIGIFTGALMGDIVWEKLSQKKRAKLTGKIQKLSRKFAHIDYTKPAHTNLITK CKFSFCRIMQKSLHKSDPEYLDGKYWAQQGWLDSGRPW >gi|224461045|gb|GG657759.1| GENE 1126 1176426 - 1176998 282 190 aa, chain - ## HITS:1 COG:no KEGG:Ethha_1033 NR:ns ## KEGG: Ethha_1033 # Name: not_defined # Def: regulatory protein TetR # Organism: E.harbinense # Pathway: not_defined # 2 189 6 186 200 108 34.0 8e-23 MDNKEAIIQAAMKLIEEKGERLEEITVREICKRANVGLGLVNYHFGNKDKLMEQCIECMI NGTVEHFQNIREKTDGFTPFEKLEYLGNMTLDFLFEHYAVSKISVLTDMQSPKENDNTHR TYAAYLPLVAACRPDLDEAAIKRKTLYLITVMQQLFLRYEIISQTLGIDLTQKENRRSFH TQVLHDILEV >gi|224461045|gb|GG657759.1| GENE 1127 1177182 - 1177631 100 149 aa, chain - ## HITS:1 COG:no KEGG:Shel_17470 NR:ns ## KEGG: Shel_17470 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 1 148 1 148 149 124 47.0 1e-27 MLKKYKLSFDIWGLLLFLIIMIPNFIWFAIPASNDVLRADSVTAMLDIIASVFQVFMVIA LCVLVNRNRSKFHITPLIVFVIICCLLYFSSWIGYYAGMVNEIIILGLTLAPCLAFIFFA IDRKNIIAVSFGCVFTICHLIYGVVNFII >gi|224461045|gb|GG657759.1| GENE 1128 1177649 - 1177855 90 68 aa, chain - ## HITS:1 COG:no KEGG:Closa_1763 NR:ns ## KEGG: Closa_1763 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: C.saccharolyticum # Pathway: not_defined # 1 67 101 167 170 121 86.0 8e-27 MTNAVKQICEYVFEKSDIIRIYAEPFAYNTASCRVLEKAGFQYEGTLRNNAVKNGKIVDM KRYSLLKG >gi|224461045|gb|GG657759.1| GENE 1129 1178072 - 1178605 161 177 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0658 NR:ns ## KEGG: bpr_I0658 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 171 1 174 183 190 55.0 2e-47 MKTVIIYNSQTGFTKRYAEWIAEATGADCFELSVAKKKDLSIYETIIFGGWACAGSISKI GWFKSNISRWADKKLITFCVGGSPIDNPEIETALKHIFNGSDQEKVKTFYCPGGFNYEKM SVTSKLMMKMFVKTLKAKKDKTEEEQVMIKMITSSYDISDKKYIEPIIKYLNNMTDR >gi|224461045|gb|GG657759.1| GENE 1130 1178583 - 1179176 248 197 aa, chain - ## HITS:1 COG:BH0317 KEGG:ns NR:ns ## COG: BH0317 COG1309 # Protein_GI_number: 15612880 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 2 103 3 103 190 61 32.0 9e-10 MPKQRITKEMVVDVAFEIARKGGMEKVMVKSIADKLGCSVQPIYSYCTNMDGLREDVGNR ARSFIGEYIVSHIDKNDLFRSTGKAYIQLAKEEPYILKIFIMQERKNILSLKDIYETETS PQMAEVIAKGLDISVECAKQLHLNMLIYTIGLGTIFSVSSPGIPIDEIFLQQEQAYQIFM NDTLRKREINNENSNHL >gi|224461045|gb|GG657759.1| GENE 1131 1179503 - 1179961 94 152 aa, chain + ## HITS:1 COG:no KEGG:Rumal_1830 NR:ns ## KEGG: Rumal_1830 # Name: not_defined # Def: GCN5-like N-acetyltransferase # Organism: R.albus # Pathway: not_defined # 1 152 1 152 154 163 52.0 3e-39 MSIKQAVLADANVVKIISEETIAEIYPHYYPKGAVDFFLAHHDEANIINDIKLNRIFLCV DIKQNVVGTVTIKANEICRLFVLPAYQYNGYGTEMLDFAETIISQQYSKIVLAASLPAKK IYQKRGYKAIEFNIIPTECNDFLCYDVMEKQI >gi|224461045|gb|GG657759.1| GENE 1132 1180101 - 1180178 61 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSYILNETPRHRMTANKPFNVKKSY >gi|224461045|gb|GG657759.1| GENE 1133 1180345 - 1181637 1462 430 aa, chain - ## HITS:1 COG:SA0376_2 KEGG:ns NR:ns ## COG: SA0376_2 COG0519 # Protein_GI_number: 15926092 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Staphylococcus aureus N315 # 116 430 1 315 315 417 61.0 1e-116 MKQDMIVILDMGSTENTVLARAIRELGVYSEIHPHDITAAELGRLDNVKGIILNGGENRV VDGQAVEVRPEIYDCKIPVMAADHPTARCEQKLAGLPDKETLKAFVFDECKAETNWNMKN FIEDQVELIRRQVGDRKVLLALSGGVDSSVVAAMLLKAIGQQLTCVHVNHGLMRKNESEG VVEVFKNQLHANLIYVDATERFLGKLDGVSDPEQKRKIIGGEFIRVFEEEARKLDGIEFL GQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIELGLPA HMVYRQPFPGPGLGVRCLGAITRDRLEAVRESDAILREEFAAAGLDGKVWQYFTVVPDFK SVGMKNHERSFDYMVIIRAINTVDAMTATVEKVDWEVLEKITNRILAEVGNVNRVCYDMS PKPPATIEFE >gi|224461045|gb|GG657759.1| GENE 1134 1181702 - 1182898 1311 398 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2845 NR:ns ## KEGG: Cphy_2845 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 398 1 396 396 636 77.0 0 MERRVGTVSRGIRCPIIREGDDLADIIVENVLEAAKSEGFDIRDRDVVAVTESIVARAQG NYASVDAIAQDVKNKLGGETVGVIFPILSRNRFSICLKGIARGAKKVVLMLSYPSDEVGN ELVSLDQLDEAGVNPYSDVLDVKRYRELFGENRHPFTGVDYVQYYSDLIESEGAEVEVIF ANHPKEILNYTKKVLNCDIHSRERTKRLLKKNGAEVVCGMDDILTAPVDGSGCNEDYGLL GSNKSTEEAVKLFPRTAKCMELVLNIQKQFLDKTGKHVEVMVYGDGAFKDPVGKIWELAD PCVSVANTEGLIGTPNEVKLKYLADNDFKELSGQALKDAVSARIKEKKEDLVGDMAAQGT TPRRLTDLIGSLCDLTSGSGDKGTPVILVQGYFDNYTS >gi|224461045|gb|GG657759.1| GENE 1135 1182978 - 1183931 930 317 aa, chain - ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 11 78 11 75 107 70 42.0 4e-12 MGFAENLQFLRQKKGYTQEQIAEQLQVSRQSVSKWESGGSFPEMDKLLQLSEMFQCGMDV LVQGDARNSYVEEHDEYEKHMNEYSRAISFGVGLLLLGVAVYELLAGVYTAEKICDMLFM FFVVGAVLIFVVQGLKHSEFARRYPMVGNVYTEKEIESFHKRYITMCAVGIGLIFCGFIL ELGMDGVALPPQLNEDAVHGVFMLFIAASISILVYAGLQKKKYSIYEYNSENASSPEKKK IGKLCGTIMMAAVLIYMLGGFWADGWGTLWVVFPAGGILCGIVSILLNKRKLGRTYLKDR VFMLCRAEKARPFVVYL >gi|224461045|gb|GG657759.1| GENE 1136 1184079 - 1184726 789 215 aa, chain - ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 3 212 2 210 216 207 51.0 2e-53 MDYKYILFDLDGTVTDPGIGITNSVMHALRKFGIIEEDRSRLYKFIGPPLADSFRQFYEF SEEETARGIEYYREYFTDKGIFENEVYEGMEELLAALNRQGRKLIIATSKPEVFAERILE HFHLDSYFSFVAGATMDEKRVKKAEVIAYALESCGISDLSGVLMIGDRKHDVIGAHEAGV DVMGVLHGYGSREELEKAGADYIVENVEEIKKFLS >gi|224461045|gb|GG657759.1| GENE 1137 1184923 - 1186218 479 431 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569028|ref|ZP_03778053.1| ## NR: gi|225569028|ref|ZP_03778053.1| hypothetical protein CLOHYLEM_05107 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05107 [Clostridium hylemonae DSM 15053] # 21 431 1 411 411 821 100.0 0 MYTYEAKKVPSKDCKSQNRLMYAQKTPAFSNKLPIQRAPIPRHLIQAILSYDHGGAVTDE LRQAVVAMDHTVLSHISDDVISRNALDIKSFMTGKPVRTDKVLPDQSQAYDMPPSESGGE PRSSSLGQVHGFSNVQVGLTQFDHMQVIRENSAHRTPMGEYKTDTARLDRRMARIAELTI IDTLTWLFASLSEQEKGILKEQTIRLEFVVGSMLNKQQQSAWTFNGGVHYVRIFLKSKQS VDPSSVPTLLSGKTPGLELKDFSDDEAEKYFSYIISHEMGHVLHALLHPAKFKVLSTILN TPSLETMKVPPEIRGLLDSALPGSSGYAKANIREAVAEIYTALVNGIQIPSTLYEWYLEN GGISVNQNTINKAGTPVPAFIARFMNTSLPGKNHVGQPVKEAVLEISKALEAGEDILPVL RTWYISNGGHA >gi|224461045|gb|GG657759.1| GENE 1138 1186243 - 1187346 1413 367 aa, chain - ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 365 14 378 380 384 57.0 1e-106 MAQIIGSPGRYIQGKGELNNLCKYAASYGSRLFILTSPSGKKRVEPSIQAGKEGTGVETV YEVFNGECSMNEINRVMKAAEGAGCDMIAGVGGGKIHDTAKAVAHYMGKPVIIVPTIAST DAPCSALSVIYTDEGVFEKYLFLPASPNVVLVDTEVVSKAPARLLVAGMGDALATYFEAR ACMQSSAANCVGGKSTLAAMALARLCYETLLENGVSAALAVTENVCTKAVEHVIEANTYL SGIGFESGGLAGAHAVHNGLTVIEETHALYHGEKVAFGTLVQLVLENADSEEIETVVDFC SAVGLPTTLSQLGIKEVKPDQIMEVAKLAAAEGDTLGNMPFEVTPEDVYAAIMAADAIGR HYAEEGV >gi|224461045|gb|GG657759.1| GENE 1139 1187503 - 1189245 1712 580 aa, chain - ## HITS:1 COG:CAC0028_2 KEGG:ns NR:ns ## COG: CAC0028_2 COG4624 # Protein_GI_number: 15893326 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 215 576 1 363 371 375 49.0 1e-104 MENINLKINGLDVSAPAGSTILEAARLAGIKIPTLCFLKEINEIGACRMCIVEVKGARNL VAACVHPVNEGMEVFTNTPQLIASRRRTLQLLLSNHDQKCLSCVRSGNCELQQLCKEYGV DDADYYEGDMTHYDLDESAAHMVRDNNKCILCRRCVATCEKTQGIGVIGANNRGFDTMIG SAFEMGLGETSCVSCGQCIAVCPTGALYEKDYTQQILDAIADPDKYVVVQTAPSVRAGLG EEFGYPMGTDVEGKMAAALRRVGFDKVFDTDWAADLTIMEEATELLDRVKNGGVLPLITS CSPGWIKYCEHYFPDMTEHLSSCKSPQQMFGAMLKTYFAEKEGIDPKKIVSVSVMPCTAK KFEIGRDDQDAAGVPDVDIAITTRELARLIKRCGIEFTVLPDEKFDDPMGESTGAAVIFG ATGGVMEAALRTAVEVLTGEELANLDFTDVRGTEGVKEASYNVAGMDVKVAVASGLNNAR TLLNKVKSGEADYHFIEIMGCPGGCVNGGGQPQVSGDVRNFTDVRGIRASVLYNNDAAKP IRKSHENPAIKKLYDEYLGEPGSHKAHETLHTSYVKRTVN >gi|224461045|gb|GG657759.1| GENE 1140 1189261 - 1191048 1909 595 aa, chain - ## HITS:1 COG:TM0010_1 KEGG:ns NR:ns ## COG: TM0010_1 COG1894 # Protein_GI_number: 15642785 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Thermotoga maritima # 6 524 8 525 527 694 63.0 0 MYRSHVLVCGGTGCTSSGSQKIRERLEAEIKRNGLEDEVGVVKTGCFGLCALGPIMIVYP EGSFYAMVKEEDIPEIVSEHLLKGRVVTRLLYDETVKNEEVLPLQETKFYKKQHRVALRN CGVINPENIEEYIGTRGYEALGTVLTSMKPEEVIQVILDSGLRGRGGAGFPTGLKWKFAA ANEADQKYVCCNADEGDPGAFMDRSVLEGDPHVVLEAMAIAGYAIGASQGYIYVRAEYPI AVERLNIAIEQAREYGLLGKNIFETGFDFDIDIRLGAGAFVCGEETALMTSIEGNRGEPR PRPPFPALKGLFQKPTILNNVETLANIPQIILNGAEWFSSMGTEKSKGTKVFALGGKVNN TGLVEIPMGTTLREIVEEIGGGIPNGKKFKAAQTGGPSGGCIPAEHFDVPIDYDNLIAIG SMMGSGGLIVMDEDNCMVDIAKFFLEFTVDESCGKCTPCRVGTRRMLEILEKITNGQGTM EDLDKLEELAAHLKTNSLCALGQTAPNPVLSTMRYFRDEYVAHIVDKKCPAGVCKALLSY KIDADKCKGCTLCARTCPNDAISGAVKEPHVIHQDKCVKCGACMEKCRFGAIYKE >gi|224461045|gb|GG657759.1| GENE 1141 1191068 - 1191442 397 124 aa, chain - ## HITS:1 COG:TM0011 KEGG:ns NR:ns ## COG: TM0011 COG3411 # Protein_GI_number: 15642786 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Thermotoga maritima # 1 114 6 118 128 85 41.0 3e-17 MKSLEELKAIREKNESKVGVRSESASQTRVVVGMATCGIASGARPVLTALSNAVQEEHLS EKISVTPTGCIGLCQYEPIVEVLEPGKEKVTYVKMTPDKAMEVFRLHLKEGQVVAKYTLG AVQK >gi|224461045|gb|GG657759.1| GENE 1142 1191465 - 1192022 567 185 aa, chain - ## HITS:1 COG:TM1665 KEGG:ns NR:ns ## COG: TM1665 COG0642 # Protein_GI_number: 15644413 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Thermotoga maritima # 1 184 4 184 186 104 34.0 1e-22 MMTEISLNILDVAENSIRAGADYITVEVLISTQADTLTAVIDDNGCGMDEEQVKRVTDPF YTTRTTRKVGLGIPFFKQAAESTGGRFTITSGKGIGTRVEAVFGLSHIDRMPLGDINTTM HTLIVFNEPVDFHYRYAYDEKEFVLDTKEMREILGSVSFKDAEVSGFIKEYLDENKKETD NGRSV >gi|224461045|gb|GG657759.1| GENE 1143 1192025 - 1192519 630 164 aa, chain - ## HITS:1 COG:TM0012 KEGG:ns NR:ns ## COG: TM0012 COG1905 # Protein_GI_number: 15642787 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Thermotoga maritima # 4 164 10 173 176 147 44.0 7e-36 MLSKKTTVQFTGTEEQEKELLGVINELKDEKGALMPILQRAQDIYGYLPIEVQKIISNET GIPLEKIYGVTTFYSQFNLSPKGRYRISVCLGTACYVKGSGDIYNKLMEKLGIVGGECTP DGKFSLDACRCVGACGLAPVMMINDEVYGRLTVDDIDDILAKYE >gi|224461045|gb|GG657759.1| GENE 1144 1192794 - 1193138 245 114 aa, chain + ## HITS:1 COG:no KEGG:Closa_3389 NR:ns ## KEGG: Closa_3389 # Name: not_defined # Def: DRTGG domain protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 114 1 114 115 147 63.0 1e-34 MIIRKIKSLLEADVLCGEEYLDEEVNYAFSSDMMSDVLAYAEEQSLLLTSLCNPQVIRTA EMLDILCIVFVRGKYPDPNMLKLAEERGIVILATSRGMFTTCGLLYSNGLLGGA >gi|224461045|gb|GG657759.1| GENE 1145 1193142 - 1193564 514 140 aa, chain + ## HITS:1 COG:TM1354_2 KEGG:ns NR:ns ## COG: TM1354_2 COG2172 # Protein_GI_number: 15644106 # Func_class: T Signal transduction mechanisms # Function: Anti-sigma regulatory factor (Ser/Thr protein kinase) # Organism: Thermotoga maritima # 15 136 40 162 181 105 50.0 2e-23 MDENLTFHYIISGDDFTRAGEASSDLKNKLKMIGADNNVIRRTAIAMYEGEINMVIHAGG GEITVEISQENIRIILADKGPGIADVEKAMQKGYSTAPEEVRALGFGAGMGLPNMEKYSD CMNIDSELGVGTTVTMDIHM >gi|224461045|gb|GG657759.1| GENE 1146 1193586 - 1194968 1223 460 aa, chain + ## HITS:1 COG:TM1421 KEGG:ns NR:ns ## COG: TM1421 COG4624 # Protein_GI_number: 15644172 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 15 307 9 276 301 100 28.0 7e-21 MDKSDKFFHSVHLDEDACKGCINCIKYCPTQAIRVHNGKAKITPEFCVDCGRCIRYCPHH AKVALYDSLEEIKNYRYTVALPAPSLYSQFNNLTNVDIVLNALISMGFDDVFEVSAAAEL VSEATRKYISEHRDDAPFISTACPAIVRIIRVKFPTLLPRLLPLKPPVEIAAEIARAKAI EKTGYPSEDIGIFFISPCPSKVTYARSPLGVKKSQIDKVVAMKDVYPVLLQHMTHDESKL TPIASSGRIGIGWSNAGGESAGLITDNYLACDGIMSALRVLSDLEDEKFYGLKFVELNAC NGGCVGGTLTVENPYIATAKTKKLHRYLPVAQTHASSYEDIDYHWSAYVEYEPVFRLGNS FRESLELMGTVEDITEQLPGLDCGSCGAPTCRALAEDIVRGEATRNDCIYAFHEYINNLS NEIGFLTRSLNLSCGNNDESMKILEDYIKKLTTELERKER >gi|224461045|gb|GG657759.1| GENE 1147 1194971 - 1195300 492 109 aa, chain + ## HITS:1 COG:no KEGG:Closa_3386 NR:ns ## KEGG: Closa_3386 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 108 1 109 116 104 56.0 9e-22 MTVQTLIDSGLFKVQVPGGTSREISKVFCCDLLSIAMSKAPENGAWVTVMGNKNTLAVAS LADISCIILAEGIQFQEEELACARSEQIAVFTTELSIFDAGLKIQELLS >gi|224461045|gb|GG657759.1| GENE 1148 1195297 - 1196073 415 258 aa, chain + ## HITS:1 COG:TM1352 KEGG:ns NR:ns ## COG: TM1352 COG0613 # Protein_GI_number: 15644104 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Thermotoga maritima # 7 233 4 217 232 104 30.0 2e-22 MKGLYYDLHIHSCLSPCGDDDMTPANIVGMAAVKGLDVIALTDHNSCRNCPAALIHGESY GVTVIPGMELTTAEEVHVVCLFPSLSDAMAFDDFIYGHILPIKNKEDIFGKQQIMNEEDE VTQTVERLLISATDISFDNVFELVESYHGTAFPAHIDKTTTSLLSNLGFVPPDSTFCCAE IHNFKNLHRIQQEHPYFLNCRMLSSSDAHYLPDIHEPEYQIHPAGKTAADIIEYLRTDIP AADNSHGMTKGSGPFQNK >gi|224461045|gb|GG657759.1| GENE 1149 1196277 - 1196969 905 230 aa, chain - ## HITS:1 COG:CAC3677 KEGG:ns NR:ns ## COG: CAC3677 COG0745 # Protein_GI_number: 15896909 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 230 1 231 232 251 56.0 1e-66 MSENITILIVEDDKYILNFISMTLKKEGYGYYVARTVEEAQSLFYANRPDMILLDLGLPD GDGMEVIRNVREVSEIPIIVVSARQEEKEKIEALDAGADDYVTKPFYMGELMARVRVGMR KLGNIRAGETDTVFVKEELLVDYGKRKVTVGGEEVHLTPIEYKILLLLIANQGKVLTHNY IIREIWGYSGEIDAGNLRVFMATLRRKIEKDPADPRFILTEIGVGYRFCE >gi|224461045|gb|GG657759.1| GENE 1150 1196966 - 1198384 1640 472 aa, chain - ## HITS:1 COG:lin2827 KEGG:ns NR:ns ## COG: lin2827 COG2205 # Protein_GI_number: 16801887 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Listeria innocua # 15 470 399 894 896 276 31.0 5e-74 MKKILKNKKFIYTVRTMLIVLTASIVCIVLKSVGVEKENVLMVFMVGVLIISTCTQGYEY GIVGAVVSVMMFNYFFTVPVHTFAIMNPNDVALMGFFLIAAVISSSLTVRFQKQMLISKK NEETARQLYEMSEKFINVTGKENIIELGIRYIYEHTGYESVVELLGEEKGADSAVEYTSK DYVMFPIIGIVKQIGILKVFNHNQGFTVEQDLLVKTASNQIGIALDRELIYAEQERTKVE MEREHMKSSMLRSISHDFRTPLTGILGDCSLIIDSKEMGREEEKQLLKDIMEQSMWLMKM VVNILNMTKIESGQQFVEKSGEVIDDVINGAERHVIGLGQRDYHVVLPKQVIMAQMDGKM IMQVLVNILDNAVKHTQEGGKIILTASFRRKRLYVSIEDDGPGIEEGMEEKIFDEFVSLS GESMDQKRGIGLGLAICRQVVSAHGGEIWAENRSEGGARFTFWLPAEQADVL >gi|224461045|gb|GG657759.1| GENE 1151 1198411 - 1199064 813 217 aa, chain - ## HITS:1 COG:SA0939 KEGG:ns NR:ns ## COG: SA0939 COG0569 # Protein_GI_number: 15926674 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Staphylococcus aureus N315 # 2 216 3 217 220 157 40.0 2e-38 MKSVLIIGLGRFGHHLCKNMIRLGNEVMIVDKEEKNVEDLLPVATAAKIGDCTNEEVLKS LGVGNFDICFVCIGSNFQSSLEITSLVKELGARYVVSKANRDIHAKFLLRNGADEVIYPD RDIAERLAVKHSANHVFDYVELAEGYSIFEIPPVAAWVGKSIQDLAVRTKYHVSILGIKS GGHLQILPRADRKLEADDHLMVVGLKKDVDKILANIK >gi|224461045|gb|GG657759.1| GENE 1152 1199081 - 1200421 1495 446 aa, chain - ## HITS:1 COG:DR1668 KEGG:ns NR:ns ## COG: DR1668 COG0168 # Protein_GI_number: 15806671 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Deinococcus radiodurans # 7 446 69 512 512 263 39.0 4e-70 MSVMMKKLTHTQMIVLGYLLIILCGTMLLMLPAASKDGQTTPFVDAMFTSTSAVCVTGLV IADTWQKWTMFGQVVILSIIQIGGLGFMTIGVFFAIVLRRKIGLWTRGTLQESVNILQIG GVVRLAKKIIIGTLIFEGTGAVILALRFQKDFGWVKGIYYGIFHSISAFCNAGFDLMGQE EAYSSFTGYYNDWTVNLVIMLLIIIGGIGFFVWNDISIHKWHAGRYCLHTKIVLTVTVVL IFGGAVLLYLFEKDNTLQGMDTSGKILCSLFGSVTARTAGFNTVDTGALTDSSKFLTVIL MFIGGSPGSTAGGIKTTTFVVLLVYMKANLRNQMYCNVFGRRLDDGAVRKASTVLCTNLL LVLAAVLAIITIQAEPVIDAAFEVVSAIGTVGMSAGITRGLADASKIILIFLMYCGRVGS LTFALSLRGHKTEAPVKEPVERIIIG >gi|224461045|gb|GG657759.1| GENE 1153 1200418 - 1200891 516 157 aa, chain - ## HITS:1 COG:no KEGG:Clos_0857 NR:ns ## KEGG: Clos_0857 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 4 133 3 138 167 62 28.0 7e-09 MANILLGLIVLGGMAYGMYLMFRIDHFAQEERNLQKEEEEQEPLPRAVVFGSGSLRRQVE AWLSGRGVAAVYIEDVCVRENWENVQYIIALSGSDADNLSLCNLMRKMYGTGYLFSVCND AENESVYKRFHIQILKADGKVEAQLGALLMGKEVSIA >gi|224461045|gb|GG657759.1| GENE 1154 1201005 - 1201457 501 150 aa, chain - ## HITS:1 COG:aq_1237 KEGG:ns NR:ns ## COG: aq_1237 COG1648 # Protein_GI_number: 15606466 # Func_class: H Coenzyme transport and metabolism # Function: Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) # Organism: Aquifex aeolicus # 1 146 7 146 187 104 34.0 8e-23 MFVDLSEKNIVVVGGGTVAARRVETLLTFAGHITVIAPKLQAALVKLETEGKITCLHREY REGDINEAHLVLAATDDREVNRSVKEECRALGQKCGGHILFNAADDRSLCDFYFPAVVQK DEIVIGINSGGKNPGKVKEIRKQLEETDGA >gi|224461045|gb|GG657759.1| GENE 1155 1201483 - 1202127 754 214 aa, chain - ## HITS:1 COG:CAC1376 KEGG:ns NR:ns ## COG: CAC1376 COG2082 # Protein_GI_number: 15894655 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Clostridium acetobutylicum # 11 210 7 205 205 150 44.0 2e-36 MEHIGLENVLPAQIEARSFEIITEELGDTPLVPGTEPVVKRCIHTSADFDYAKNLVFSDG VIERALEALRQGAVIVTDTQMGKAGINKKKLAEYGSEVICFMSDEDVAAAAKENGTTRAA ASMDKAAALDRKMIVAVGNAPTALVRLHELVRDGALKPEVIIAVPVGFVNVVRSKELILE LKDVPSIVARGRKGGSNIAACICNALLYMLDERR >gi|224461045|gb|GG657759.1| GENE 1156 1202127 - 1203110 866 327 aa, chain - ## HITS:1 COG:CAC1383 KEGG:ns NR:ns ## COG: CAC1383 COG2087 # Protein_GI_number: 15894662 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Clostridium acetobutylicum # 2 188 4 185 185 71 29.0 2e-12 MLYLVTGGSGSGKSAFAEDLICRLHAENNGQKPGRLFYIAAMMPFGAETRQKIRRHRTMR RDKGFETVECYTAIETPAKEGGPVYEAAVQGADAYVLLECMSNLTANEMYAPEGAGPDTV DAVLRGIEILYSRCRVLVVVTNDVFGEGEAGTGGMKEYRETLGEINRRLAKMAGQVTEVV CGIPAAVKSSTAEKEEGAHMKVITGGACQGKTAYAERVFGVKRWMDGGSCGFDDIYTCKA VRHFERLVRRMMEAGVSTEALAREIAVRNPDIVITVNEIGCGLVPVDEFERACREQTGRI CTQLARAAGRVDRVICGIGVTLKGGDR >gi|224461045|gb|GG657759.1| GENE 1157 1203138 - 1204760 1631 540 aa, chain - ## HITS:1 COG:CAC3634 KEGG:ns NR:ns ## COG: CAC3634 COG4166 # Protein_GI_number: 15896868 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 63 523 68 537 550 273 34.0 8e-73 MKKTVSVLTVLCLIGVLALSGCAGQEKETAGSTKEIVVAVNSETGGLDPAGMIALTYLAY SVSALDELLTFDENGDIEYRAAESYEVNADSTVWTFHLRKDAVWSDGTPVTSADFVNTIK RALKPESGSGYANYLFPVKNAEAVYNNEADAASLGVDTPDDHTLTFTLEKPCVYFLDLLR LPVYTPSCCAYADDASSGWDKDPKTSVSNGPFYLAKYVPEQYFVLKKNTKYWNADAVKLD KITYRFFADQQSMANAYETGEVDVATGLPSSVMELYEGKEDLQVTDTIATRYIYPNLNVR PLDDVRVRKAINLAIDREELCKIVGADTSPTVNFVAKYMKDRQTGKYFVDGAEKPFKEDV KEARRLLKEAGYEDGRGFPELTYNYPALEMDSDTAQVIQEQLKKNLNIDIKLNAQELQVN YTERRAGNFELCRMNWTADFADPYTYLSMLLSNSTYNCSGIQDEAYDRLVGQSDTETDPA ARAALMHEAEQLAVGGQFYIIPLYAMKSCNLIRPDIKGIAQIPATGALEYRYADIETADN >gi|224461045|gb|GG657759.1| GENE 1158 1204772 - 1206604 826 610 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 3 534 8 528 563 322 36 4e-86 MSLLKIQDLNVQFYDGQKGQEAVRHLSFEAASGEIVGIVGESGSGKSTAMKAVLGLLPGS AQVVCRRMELGGTDITPPSRGKGKKEYERRMASVRGDKIAMVFQNPQTSLNPTVKVGRQI TETIRAHRQCSRARAKERALELLDMAGICDGAALMEKYPFELSGGMCQRAAIAIALSCEP ELLIADEPTTALDATVQKQLLELFRRVRRETGTAVLFVSHDLGVIASLCDRVLVMHDGAL AEEGSVEDIFYYPQHAYTKELLARAGELQKLSDVRAGEGTLLNVSHVGKEYPEAGNFSKR AATEAVRDVSFHIEKGEIFGLVGESGSGKTTLARIIAGVLKPTRGTVLYDGGEPDGRGRA PKRMVQMIFQNPYTSLNPRMTVQSMLEEPLILHTGCTRQERRERVEQMLSYVGLKREDAR KYPAAFSGGERQRIGIARALMSEPGLLVCDEPVSALDMAVQEQILEVLEELQVNRGISCL FISHDLNVVKRISRRTGVMYAGSLVEVGRTKEVYRDPWHPYTKALLSSILVPDPLKARRK KGVLRREEQTAEAYPGEGCPFAPKCGYAMGCCFKKRPERFRFGGREVSCFLYSEAYTGKR SKDYRMTSQI >gi|224461045|gb|GG657759.1| GENE 1159 1206612 - 1207433 924 273 aa, chain - ## HITS:1 COG:BS_oppC KEGG:ns NR:ns ## COG: BS_oppC COG1173 # Protein_GI_number: 16078210 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus subtilis # 5 267 37 299 305 210 40.0 3e-54 MKTYLRKNPLLVTGVILLAVMTALAVLIPVLSPYTDTAQNAGLRNAPSSLAHLFGTDKFG RDIFVRVFSGTRISLSIGIGSAVICGAVGILYGSAAGCGGEKTDMLLMRAADVIDSIPSL LYVILIMLVMGASAGSILLGFCIGGWVGLARIVRGEIRRLRSEDFCTAARLLGAGTGRIL FVHLLPNAAGAIIVNLTFLIPKAMFTEAFLSFVGVGISAPAASLGTLIQDARSQIQVAPA QMLYPILVLCILILSVNLIGAGLEKAVRRAEEG >gi|224461045|gb|GG657759.1| GENE 1160 1207430 - 1208350 1031 306 aa, chain - ## HITS:1 COG:CAC3638 KEGG:ns NR:ns ## COG: CAC3638 COG0601 # Protein_GI_number: 15896872 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 302 1 303 306 243 43.0 4e-64 MGRYTRRRILLGILALFVLVTAAFFLTRMIPGSPFQSGNVSESVLRSLEREYGLDKPAGG QYVTYLGNLLRGDLGMSYKKPGTSVAEVIARAWPVTFFLGFLAILLAVVLGTVMGVWQAV TERKAVKGGIFLGTMLGTGMPNFVIALLLALLFGVKLKFLPVAGLTGAANYVLPVVSLAV YPASVITRMIHNAAEEEMKRDYVVMARAKGLGRRRILFMHVLKNAWLPVLNYIGPAAAFL LTGSFVTESIFTIPGLGREFVTSIANRDYTLILGLTVFMGTVVIGINLITDLVGAWLDPR VRRTCR >gi|224461045|gb|GG657759.1| GENE 1161 1208384 - 1209925 1353 513 aa, chain - ## HITS:1 COG:STM3477_2 KEGG:ns NR:ns ## COG: STM3477_2 COG0007 # Protein_GI_number: 16766765 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Salmonella typhimurium LT2 # 1 246 2 243 247 237 50.0 4e-62 MDQSGKVWLAGAGPGDAGLLTVKTRELIESSDVIVYDALISAEILSLIPPGKEVINVGKR SGHHLMMQQEINEILLREAQKGKNVLRLKGGDPFVFGRGGEELELLVRHHIPFEIVPGIT SASAVPAYAGIPVTHRDHASSFHVVTGHPRQDGTETLDYDSLVNVEGTLVFLMGLTSMER ILNGLIEAGLDPDTPAAVLEKGTLAAQRRVVSAAGRLAEDAGRAGIGTPAVILVGKVCAL SEQFCWAEERPLGGRQILITRPRMSSSALAGKLRSLGAQVIELPAISTRSISPNFALQRA MKQFGDRAGEEWLLFTSPAGVRIFFEQLAEFKMDVRHIFGRSARVKIAAIGSATEKALRG YGLLADVVPDVYCAAGLGEAVAACAQPRARITAVRAMSGSEELLPPLLEAGLKVDDIPLY ETVYETHEQVKEKIQSLFEEGGIDAVTFTSASTVKGFVQTMEQLDFQSIHAFCIGAQTAE EAAKFGMHISTAKEASMDSMTEQILEELGRHGR >gi|224461045|gb|GG657759.1| GENE 1162 1209909 - 1210805 523 298 aa, chain - ## HITS:1 COG:NMB0539 KEGG:ns NR:ns ## COG: NMB0539 COG0181 # Protein_GI_number: 15676445 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Neisseria meningitidis MC58 # 7 288 8 294 311 198 42.0 9e-51 MQSIIRIGSRESRLAVKQAEIVKQAVERNCPDIKAEIVTMKTEGDKILDRRLELAGGKGL FVKELEKALLDGRIDICVHSLKDVPMEVPEDLPVVAFGEREDPRDVLIYKPGRTSIPEGG VIGTSSRRRELQLKRLYPSCTFRSIRGNVQTRLRKLSEEGFDGTVLAAAGLKRLHMEEVA GRVFSVDEIIPAVGQGILAVQGRKGRDYSWLTSFACGKSRAEAEAEREFAAALGGGCTSP VAAHAQAQGAELKLTGLYYCGGDIYRTRTRTGETDRARQLGAALAEEMRREEEDGSVR >gi|224461045|gb|GG657759.1| GENE 1163 1210793 - 1212319 1575 508 aa, chain - ## HITS:1 COG:CAC1374 KEGG:ns NR:ns ## COG: CAC1374 COG1492 # Protein_GI_number: 15894653 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Clostridium acetobutylicum # 5 498 4 485 491 493 52.0 1e-139 MAKCIMIQGTMSNAGKSILAGGLCRIFAQDGFRTAPFKSQNMALNSFITREGLEMGRAQV MQAEAAGVEPSVLMNPILLKPTSDMGSQVIVNGEVTEVMPAAEYYRRKKELVPHILDAYN KLSDAYDVIVIEGAGSPAEINLKSGDIVNMGLARLVDAPVLLVGDIDRGGVFAQLVGTME LLEEEERQRIKGMVINKFRGDKNILLPGLEMLEERTGVPVRGVIPYFHLDIDEEDSLTER FEKKESGGLVDIAVLRFPRISNFTDFMALECMEEVSVRYVSAPGAFGRPDAVLLPGSKNT IEDLLWMRQNGLEAKVLRHAAEGKTVFGICGGYQMLGQEICDPEGVERKGTVAGIGLLPV RTVFEREKTRTRVRGRICSVDGILQGMSRLPAEGYEIHMGRTVCEEGVRPFLEIENEENG AVIRDGAACKNVYGCYVHGLFDLTETSAGFVRSLLTAKGLGLSAVKPRDLAAYKEEQYDK LAAVIRESLDMDAVYDILENGKEAACSL >gi|224461045|gb|GG657759.1| GENE 1164 1212335 - 1213468 866 377 aa, chain - ## HITS:1 COG:STM0644 KEGG:ns NR:ns ## COG: STM0644 COG0079 # Protein_GI_number: 16764021 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Salmonella typhimurium LT2 # 30 368 8 356 364 228 37.0 1e-59 MTKGMRRKAARIRGSGLPRITAGGMMEYIHGGDIYTYEGMTDFSVNINPFGPSGQVLEAV RTEAAHIGAYPDSRCRKLRCALAERYGISEENFIFGNGAAELIFSAAFAGRPRRAVLTAP SFAEYAMALEAAGCEVVYHYMEEEESFRLTERYMEELTEDVDMIFLCSPDNPSGQVIDLP LLDRIIGRCGELGIRAVIDQCFCEFLERSYSILPVEAVLDKPWVLLLRAFTKMHAMPGLR LGYGICSDRAFLEKMELVTQPWNVSVPAQAAGLAALSETERVQRTRAYVARERRRIEKEL EHMGITYYPSAVNYILLYSRYDLSALLKEHNILIRDCSNYEGLRKGYYRIAVKMRKENDM LLKALREIYKEGTSGRL >gi|224461045|gb|GG657759.1| GENE 1165 1213470 - 1214423 945 317 aa, chain - ## HITS:1 COG:lin1155 KEGG:ns NR:ns ## COG: lin1155 COG1270 # Protein_GI_number: 16800224 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Listeria innocua # 7 306 10 307 315 246 44.0 6e-65 MACLTGFILDLICGDPIWLYHPVRLIGRFISFLEHLSRKVCRDNKRRLITAGVLMWITVA ALSAAVPCLLLYAAGAVHPALRFVLESFWCYQLLAARSLGQESRKVYGKLKEGSLPEARK AVSMIVGRDTAKLDEAGVIRAAVETVAENTSDGVTAPLLYMMIAGAPLGFFYKAVNTMDS MIGYKDENYLYLGRCAAKMDDVLNYVPARLSALFMTAAAFLLGMDGRSAWRIYRRDRKKH ASPNAAQTEAVCAGALNIRLAGDAWYFGVRYPKAYIGDDIRPAEAEDIVRAGKLMYATAI LSFLLFGMLRLAAVLTG >gi|224461045|gb|GG657759.1| GENE 1166 1214432 - 1214980 499 182 aa, chain - ## HITS:1 COG:BH1593 KEGG:ns NR:ns ## COG: BH1593 COG0406 # Protein_GI_number: 15614156 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Bacillus halodurans # 30 171 49 192 209 77 32.0 2e-14 MGRTDEELAGEDLEIQVRTVRGRLKDHGSVEYVAASPMKRCVQTAALLFAGRAPLLFDEL RECDFGLFEGHNYEELKDLPVYREWLASKGELPFPGGESHDAFKDRCVSGFSRAADCLIR KGCARAGMVVHGGTIMAVLSRFDPKQRGFYEWQPENGGGYAVTLDEDEWKQGRIVFTEIE VL >gi|224461045|gb|GG657759.1| GENE 1167 1215036 - 1215797 760 253 aa, chain - ## HITS:1 COG:FN0912 KEGG:ns NR:ns ## COG: FN0912 COG0368 # Protein_GI_number: 19704247 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Fusobacterium nucleatum # 4 243 1 266 278 77 25.0 2e-14 MYILESFFIAFSMYSKIPVPRVEWQEKNMKYAMCFFPAVGMVSGVFEVVSGMLLLRAGAG AFLFAVVMTLLPVLVTGGIHMDGFMDTLDALGSYGDREKKLAILKDPHTGAFAILGLCCY LLWSVAVWTEAEADMLPVIGCGYVISRALSGLSVVTFKAARDTGLASTFQAAAVRKRVRI VMIVLILMFSVLSLVLDEKMGAASVLAGLLSFLYYRSVCDRQFGGITGDLAGYFLQVCEL AMLTCIVLAGRIL >gi|224461045|gb|GG657759.1| GENE 1168 1215808 - 1216899 1240 363 aa, chain - ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 14 363 4 352 352 277 44.0 3e-74 MEQTIQIPDRLTPEYLQNAIEPADRKSMETAGKRWTSVAKPLSSLGKLEDAIVKIAGMKR EPLFTLEKKGLVIMCADNGVVEEGVTQTGQEVTAIVADNFTKKAASVALMSEVAGADLFP VDIGMVTDVPSVTDPKQKVAYGTRNMLKEPAMTPKQVWQAVSVGVHMVSRLKALGYDILA TGEMGIGNTTTSSAVASVLLQRPVEEVTGKGAGLSSSEGLERKISVISRAIRLHGPDRKD VTDVLSKVGGLDIAGLTGVYLGGALLHVPVVVDGFISAVAALCAVRLVPEAADYILASHV SKEPAGKMLLDALHLSPFLTCDMSLGEGSGAVAVLPLLDMGLSVYSRMSTFEEINVEQYE RLK >gi|224461045|gb|GG657759.1| GENE 1169 1216901 - 1218292 1216 463 aa, chain - ## HITS:1 COG:STM2035 KEGG:ns NR:ns ## COG: STM2035 COG1797 # Protein_GI_number: 16765365 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Salmonella typhimurium LT2 # 6 456 8 456 459 295 37.0 2e-79 MENARFMITALSSGSGKTVIAAALMSAFSGRGLKVAACKCGPDYIDPMFHREALGVESEN LDLFFLSGDVLRTLFLRHARQAEVTVLEGVMGYYDGMSLDTDRASSFEVARTLDVPAILV VPCKGAALSLVPLILGALTFREESNIRGILLNRISGGLFPRMKQMIEEELSKRGFPVPVI GYVPEDEVFRLKSRHLGLVLPREVQDIQEQLRRAGKLLAETVDLDLLLEIGRKAGEEAGC EAEAEEGIQASHSVKVAVARDKAFCFYYKDNLELLEELGCELVEFSPLHDTSLPQGISGL ILGGGYPELYAAELSGNRDMCRSISSAVKAGLPCLAECGGFLYLHTEMEGADGSMYPMAD VIQASARRKERLVRFGYMELSAGKAGSFLGQGEVLRGHEFHYYDSTDNGNGCTAVKPDKK RSWKCVHAEGNLFAGFPHVHFYSNPSFARRFAACCRTWTGKEG >gi|224461045|gb|GG657759.1| GENE 1170 1218292 - 1219524 1152 410 aa, chain - ## HITS:1 COG:FN0964 KEGG:ns NR:ns ## COG: FN0964 COG2242 # Protein_GI_number: 19704299 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Fusobacterium nucleatum # 222 403 1 182 189 129 37.0 1e-29 MYKEMHKDNRRKISLTGIGMGAGASLTGEAQAALERCDCIIGADRMTEALSRFGKPSYHA YKAERIKEIIEEHSEYRHIAVALSGDCGFYSGAKTLAGELEEYETELIPGVSSVAYLAAR LGVSWEDAALMSAHGRRQNYIYSIARSEKTFLLLGGTQCAEALCEKIRYYGLADVEFWIG RQLSYEDETIVHRTGRELKPEDCEGLDVAFVRNPSPDKRVAVHLPDDAFVRGEVPMTKSE VRSVSIGKLGLTKDAVLYDIGAGTGSVSVEAALCSGEIKVYAIEKNPEAVRLLEENRRRF LCDNIEIIEGTAPDAVHALEAPTHVFVGGSSGNLKAILSAVRKKNPGAGIVINAASLETV GEVMKAAEDGLLFDPEIVQIAASRARKLGRYHMMSAQNPVYVVSDGKGQR >gi|224461045|gb|GG657759.1| GENE 1171 1219517 - 1220248 666 243 aa, chain - ## HITS:1 COG:lin1162 KEGG:ns NR:ns ## COG: lin1162 COG1010 # Protein_GI_number: 16800231 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Listeria innocua # 4 240 2 239 241 240 50.0 1e-63 MNSVYVVGIGPGGGEQMTGEARKALESCDIIIGYTVYIDLIRGQYPDKTFLTTPMTQEAE RCRMAFEEAEQGRDVSLVCSGDAGVYGMAGLMYEIKGAYPHVNIKVVPGITAATGGAAVL GAPLMHDFAVISLSDLLTPWEKIEARLRAAAMADFVICLYNPSSRKRKDHLKRACEILLE YKRDDTVCGTVRNIGRDGEARQVMTLAELKDTEADMFTTVYIGNEQTKQIDGSMVTPRGY RNV >gi|224461045|gb|GG657759.1| GENE 1172 1220241 - 1221014 935 257 aa, chain - ## HITS:1 COG:MJ1578 KEGG:ns NR:ns ## COG: MJ1578 COG2875 # Protein_GI_number: 15669774 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Methanococcus jannaschii # 2 249 7 255 259 269 53.0 3e-72 MIVFVGAGPGASDLITVRGQKFLKEADIIVYAGSLVNPALLDVKKEGCEVYNSARMTLGE VLEVLVDGAAAGKKVVRLHTGDPCLYGAVKEQMDALAEKGVPYEVCPGVSSFCGAAAALE AEYTLPGVSQSVVITRMAGRTPVPEGESIRSFAAHGATMVIFLSTGMLPALQEELMAGGY DGDTPAAVVYKATWPEENVCRCTVETLAETAEEEGIIKTALIVVGRVLDGSYEHSKLYDP AFGTEFRKAAAGGQEHE >gi|224461045|gb|GG657759.1| GENE 1173 1221020 - 1221757 821 245 aa, chain - ## HITS:1 COG:CAC1379 KEGG:ns NR:ns ## COG: CAC1379 COG2243 # Protein_GI_number: 15894658 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Clostridium acetobutylicum # 6 242 5 217 221 107 32.0 2e-23 MEGIFYGVGVGPGDPELLTLKAVRIIQECEVIAVAVSDKSADRPVYDAVRREEHGGYLKR CTAYQTALPSVPGMEEKEMLYLPMPMIKEKEKLKKIHDECADAAGEILAQGKKIAFITLG DPSIYSTCLYVHKRLKRQGYRTCLVPGIPSFCAAAARMDTGLAENREEIHIIPASYGVEE SLGLPGTKVLMKAGKKMPAVKQAVKDRGLKARMAENCGMPDERIYEDVEDIPDDAGYYSL MIIKE >gi|224461045|gb|GG657759.1| GENE 1174 1221758 - 1222912 1074 384 aa, chain - ## HITS:1 COG:STM2032 KEGG:ns NR:ns ## COG: STM2032 COG1903 # Protein_GI_number: 16765362 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiD # Organism: Salmonella typhimurium LT2 # 11 380 10 378 379 243 42.0 3e-64 MKGDGRNTQTVWKDQKLLRTGYTTGSCAAAAAKASAFMLLSKEPVYQVSLKTPQGAVLYL AVECIDMGADRVSCAVRKDSGDDPDVTDGVLVFAEVARRAGTSVSLDGGKGVGRVTKKGL DQPPGAAAINKVPRRMIVEAVEEQRRKFGCTFGLHIIISIPEGEALAEKTFNPRLGIEGG LSVLGTSGIVEPMSERALTDTICLEMKVLKENGHEWCYIVPGNYGSDFLTETLKYDGRLA VKCSNYIGETIDDAVRMGMKGILFVGHIGKLVKIAAGVMNTHSRQADCRMEVFAAHAALA GASRDTVRQLMECVTTAGAVDILKASNMLEPVMQTIMEQIDVHLKQRAGKTLMTGAIVFS AEEGILGQTSRAAEILEQIRKGTV >gi|224461045|gb|GG657759.1| GENE 1175 1222934 - 1223713 1004 259 aa, chain - ## HITS:1 COG:lin1165 KEGG:ns NR:ns ## COG: lin1165 COG4822 # Protein_GI_number: 16800234 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Listeria innocua # 6 256 2 251 261 202 45.0 7e-52 MEGKTKRAVLVVSFGTSHMDALKKSIEQVERHIEEAFPTYRVYRAFTSQMILRKLKRTQH LDIFTVKGAMEQMAADGMEEVIVQPTHIINGIENDKMMEDLMEYTDRFKKIRAGRPLLTS VDDYKKAIHAVMAEVELKEGEALVLMGHGTDHHANAAYPTLEYTFHSLGYSQVLVGTVEG FPDLRNVMTRLEISGMKKVMLMPFMVVAGDHAKNDMAGEDDSWKTELEAAGYEVRTLVKG LGEMKGIRNIYAEHIEAVM >gi|224461045|gb|GG657759.1| GENE 1176 1223713 - 1224579 371 288 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 17 273 133 387 398 147 32 2e-33 MRKEAEETAEDIIVEAKDVYYSYEDGGRPSLNGVSLKIARGKKVAFLGANGSGKSTFFLC CNGIHKPDSGTIFIGGRPLDYSRKGLMDVRRKVGIVFQDPDDQLFLASVYQEISFGPMNL GLPEAEVRSEIERVMDDLEITPFRDRPAHALSGGQKKQVAIADVLVMHPDVIILDEPASA LDAKHTKLMNEIVDRLAMEGITILMATHDIGYALEWADEIVLMHEGRVLLQADPVTVCGS REELALANQEAPAVLRLFWRLEEKGVLEKDLRPPVNFEQLEQYIAEGR >gi|224461045|gb|GG657759.1| GENE 1177 1224576 - 1225349 699 257 aa, chain - ## HITS:1 COG:MJ1089 KEGG:ns NR:ns ## COG: MJ1089 COG0619 # Protein_GI_number: 15669277 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Methanococcus jannaschii # 3 250 8 253 268 122 30.0 8e-28 MIVVDKLCYQSKLRYVNAGEKFAFSMLSLLFCILSRMFLISAAVLAVNSFLTVRKGGIAP GHYIRLMAVPLAFVILSTLAIIVNISKVPLDAYAVPVGAFFITGSRDSVLFGVRLIVTAM SAVSCLYFLSLNTTMTDIMSVLNRLRCPRVIIELMLLIYRYIFVLMETASAILVSQKARL GNRDLRTSVRSFGQMGCGLLIKAFRRSGALYDAMESRCYDGTIRVLEEQRPARPAEIAGI VLFELILLALVIWRRTV >gi|224461045|gb|GG657759.1| GENE 1178 1225372 - 1225695 493 107 aa, chain - ## HITS:1 COG:STM2022 KEGG:ns NR:ns ## COG: STM2022 COG1930 # Protein_GI_number: 16765352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 6 90 2 81 93 67 37.0 6e-12 MTKNTKTVIILLAAAVLIAVIPLFALKGAEFGGSDDAGSVMVEEINGEYTPWFTPVLETA LGGELPGEIESLVFCVQTGIGVGIIAFLMGRFVERRKWLRGDEAKKE >gi|224461045|gb|GG657759.1| GENE 1179 1225697 - 1226446 807 249 aa, chain - ## HITS:1 COG:STM2023 KEGG:ns NR:ns ## COG: STM2023 COG0310 # Protein_GI_number: 16765353 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Salmonella typhimurium LT2 # 11 227 13 230 245 208 52.0 8e-54 MSKKEKILLKAAIAFALMFAVTPVANAMHIMEGYLPAAFCVAWGVICIPFLAAGLISLKK RLKENRKSITLIAMAGAFIFVISSLKIPSVAGSCSHMTGTGLGAILFGPSAVSVLGVIVL LFQAVLLAHGGLTTLGANTFSMAVAGPLLSFGIYKLCSKCKMNRKVSVFLAACLGDIFTY CVTSIQLAIAYPSESGGAAASAVKFLGVFAPTQLSLAVIEGILTVVIVIGLESYARPELK AIGFLKEAR >gi|224461045|gb|GG657759.1| GENE 1180 1226761 - 1227534 823 257 aa, chain - ## HITS:1 COG:lin1163 KEGG:ns NR:ns ## COG: lin1163 COG2099 # Protein_GI_number: 16800232 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Listeria innocua # 5 236 2 227 250 118 31.0 9e-27 MDAKILLFAGTTEGRELAELLRGQGAKAYVSTATEYGKECVGEGGSITVCAGRMNEEEIC WFIRKHDIALTVDATHPFARVATENIRRACKACGTAYIRCVRKRQSSAEDEDGVVYVASV KEAVDYLKETEGNIFISTGSKELKLYTEIADYRERCYARVLSTKEAVEESTALGFTGAHL MAMQGPFSTELNAAMLKYTDAAYFVTKESGKAGGYEEKKEAAGETGAVLVVVGRPKESGL SLEETKSYLIAYLEGLC >gi|224461045|gb|GG657759.1| GENE 1181 1227550 - 1228626 1021 358 aa, chain - ## HITS:1 COG:STM2028 KEGG:ns NR:ns ## COG: STM2028 COG2073 # Protein_GI_number: 16765358 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Salmonella typhimurium LT2 # 67 349 64 347 351 171 41.0 2e-42 MKEDKNLTIISFTDAGSRLSAALCRQYAKGRTACACYAPQLFAGRYGLRPLPEDAKGLIG ELWEKEALLFIGAAGIAVRFIAAYVQDKFTDSPVIVMDEKGQYIIPLLSGHAGRAVELAR ELAGYTGGVPVITTATDVQGKFAVDMFALKNGLVIESRELAKKISAAVLEQEEIGFYSTF PVDGPVPEELRLCKAPGELKYYPYAVAVVDESDSREETAEDTVLRLRHKPRIVAGVGCRK GTEKGQLSAGLAEVLEANKILPGQLAAFASIELKKEEPGLIALAAEYGVPFQTFTAEQLS TVSAVSSHSEFVERVTGVDNVCERAALRFCQDGELIQPKICAQGATFALVRDRCRLSF >gi|224461045|gb|GG657759.1| GENE 1182 1228676 - 1229149 510 157 aa, chain - ## HITS:1 COG:CAC1363 KEGG:ns NR:ns ## COG: CAC1363 COG2032 # Protein_GI_number: 15894642 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Clostridium acetobutylicum # 2 152 22 178 182 112 41.0 2e-25 MEEFIREMPAARAKLKGAPGLEDIRGNVYFYSTYGGTVVVAEVYGIPEKTEQASGGFLGF HIHEGTSCTGNAQDAFAGAKGHYNPGKKEHPGHAGDLPSLLVKGGIAWMAVYTGRFYPEE VIGRTVIVHDMPDDFRTQPSGGSGAKIACGEIVVWEG >gi|224461045|gb|GG657759.1| GENE 1183 1229271 - 1230089 833 272 aa, chain + ## HITS:1 COG:BS_yfjS KEGG:ns NR:ns ## COG: BS_yfjS COG0726 # Protein_GI_number: 16077865 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 46 268 30 252 263 219 48.0 6e-57 MKYLSSYKKWGKVLFIFAAAFLAGTLGAKAAEHFTGESVQTAADGNWGLSFQEDGQPPAG NATADELKKFDAFFKSDTEDKVIYLTFDCGYENGNTAPILDALKKHKVPATFFVVGNFIS ENPELIKRMKEEGHIVGNHTYTHPDMSKISTKEAFSDELGKVETLYKDITGEEMTKYYRP PQGKYSEGNLQMAKDMGYKTFFWSLAYVDWYQDKQPTKEEAFDKLLKRIHPGAVVLLHST SSTNAQILDELLTKWEEMGYSFQPLDKLSKTK >gi|224461045|gb|GG657759.1| GENE 1184 1230172 - 1230525 354 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569075|ref|ZP_03778100.1| ## NR: gi|225569075|ref|ZP_03778100.1| hypothetical protein CLOHYLEM_05154 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05154 [Clostridium hylemonae DSM 15053] # 1 117 1 117 117 235 100.0 6e-61 MLERLLKYPGFIYRIDGTFYYLGKWICKECTDTEASDCVPMYEMCRSEKEDAEAGMYFHK IRAYSDFALDIPYDPALIREHMTALVDGLSPDARKDLSGQIERFEEDHGKYCGKLPA >gi|224461045|gb|GG657759.1| GENE 1185 1230589 - 1231533 1061 314 aa, chain - ## HITS:1 COG:L181867 KEGG:ns NR:ns ## COG: L181867 COG1275 # Protein_GI_number: 15672360 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Lactococcus lactis # 2 294 10 303 324 150 38.0 4e-36 MIKRIPLPVTGVMLGMAALGNLLQSYSEGVRLVCGAIAAVTGLLVLLKVILYPKQFAEDM KNPVTASVSGTFTMALMLLAGYAKPYLNSGADIIWYAAIVLHIVLIVYFTAKFMVHLDMT KVFASYYIVYVGIVVASVTAPAFGRTGTGTVLFWFGFAALLVLLALVTYRYMKYKNMPEP VQPLFCIYTAPASLCLAGYIQSVQPKSVVMISFLAILSTLIYLVVLVRLPAFLKMRFYPS YAAFTFPFVITAIGMKMTAACLANMGTPLPFLNYVVLIETIIAAVLTIYALIRYIASVCR QPGEQKAAHVETTT >gi|224461045|gb|GG657759.1| GENE 1186 1231547 - 1232020 648 157 aa, chain - ## HITS:1 COG:no KEGG:Closa_1050 NR:ns ## KEGG: Closa_1050 # Name: not_defined # Def: C_GCAxxG_C_C family protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 157 1 157 166 248 77.0 6e-65 MNVKSEVSVAKITKDAEDLFRNGFFCSEAVVSSIRSNFEIDVPEAVISMASGFPVGIGRS KCLCGAVSGGVMAIGLVFGRTVQKDPQVEETMRLSKELHDWFKEASGKNAICCRILTKEF DMGQGEHKEQCVRFTGMVAGKVAEMIIREKGLKNTDE >gi|224461045|gb|GG657759.1| GENE 1187 1232164 - 1232580 415 138 aa, chain - ## HITS:1 COG:SMb20269_1 KEGG:ns NR:ns ## COG: SMb20269_1 COG1786 # Protein_GI_number: 16264007 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 121 1 121 138 108 45.0 2e-24 MKEIKDFKVLLEGEVKGEALVSQDPLSFWGGVDPASGEIIDVHHDLRGENLTGKILCIPY DRGSCSGSGVLIEMVKTGTAPAAILCIEAEPVLALGPLIGQKMYGRGMALRTVSKEEYTL LRSGDIVTFTKDSICIGE >gi|224461045|gb|GG657759.1| GENE 1188 1232583 - 1233836 1063 417 aa, chain - ## HITS:1 COG:PA1259_2 KEGG:ns NR:ns ## COG: PA1259_2 COG1679 # Protein_GI_number: 15596456 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 3 414 1 409 420 293 38.0 5e-79 MQLTEYEQEMLDGRYGEGMQAAIEILVKMGGLYGAERFLPVKNAHIDAAAYTTIWDAGTE FVEYLADKGAKVSVPTTINPMSMDTRRWREQYTSEAFAEKCERLRKAYMKLGVNPTWTCA PYQCTNVPVFGENVSWSESNAVNYVNSVVGARTERLPDLVDVCCAVAGRVPEYGLYLEEN RAGEILFTLKGFDGSAFRDTVDYAVLGYLVGETAVNRVPVVLGLPESTMPDQLKAFSAAA ASGGATSLFHAVGLTPEAPTLEAAFHGKTTYETVEITPAEVAQMRARLNTGDTEKVDMVL MGCPHLSFQEIKEIACGIEGKKVHEGTEFWIQTSHPIYELASLAGYVEVIEKAGAMLVRD TCLMEMEYNGIWRGKHFVTNSGKAAQYAPAINGVKITMADMAGCVEAAVTGKKPKEA >gi|224461045|gb|GG657759.1| GENE 1189 1233987 - 1234865 1083 292 aa, chain + ## HITS:1 COG:BH2117 KEGG:ns NR:ns ## COG: BH2117 COG0583 # Protein_GI_number: 15614680 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 3 278 5 281 290 108 27.0 1e-23 MNKYRIILDVYKTHSISKTAGRLNYTQSAISQAIKNFENELGFQIFRRSKAGMELISGME EIIQSLENICHEEDKLSKFAKNLTSLDSGYIRIGSVQSVSYNWLPNLIKDFSDKYPNIRF ELMIDGIAPLKAKLDNEQLDCVFTSKYMLPGYPFKQMDEDEMMLVMPENHRLAGRETISV SEIDYENFVMSANGLDEEAGIIFEENHIIPKVQYEPTEDFAALKMVELGFGLTIIPKLFL TGTTFRVYACPFEEHYSRILGIAYAPDKPLSPATRKFLDYIKTWELPRQYRT >gi|224461045|gb|GG657759.1| GENE 1190 1235100 - 1235333 282 77 aa, chain - ## HITS:1 COG:no KEGG:Closa_0017 NR:ns ## KEGG: Closa_0017 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 77 1 76 76 69 44.0 4e-11 MRTERFKMEREGLVEEGQEVEVSERSAVTGQYTYLVEPSIAMSGIYRTSERIKSRSGIIR KIEKTEKGFYLLVEMEE >gi|224461045|gb|GG657759.1| GENE 1191 1235447 - 1237186 1570 579 aa, chain - ## HITS:1 COG:FN0190 KEGG:ns NR:ns ## COG: FN0190 COG2972 # Protein_GI_number: 19703535 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Fusobacterium nucleatum # 14 568 8 549 552 403 38.0 1e-112 MEKKRSIHGWLRRFSVQLPLFFLGTGLAVILILSGAVYFFSVNLLMDETVSKTHELLELS GTNLSTYIARVKGESNVFASDPTLRQYLSGNDEGPREGLLSRIGALLHNDGAIKSVVVVS KDGRILSNEADLDMSVSEDMMKEDWYIESIHNTMPVLTGARMQSFSDDKDNWVISISTEI TGAAGENLGVLLMDMKYSVVEDHLSRLDLGTEGYVFLLNDKGELVYDKDTSYFSDPDKQK QLQAVLAEGDSYDKEQNMLTYQTRIENAGWTMVGVVSLDTLRMLEQQLFEAVLLTGVLLF GAVLLLCVLFTRRLAAPVADLKRGMNEIEKLAEISVHRHGFTEMELLAGNYNRMIRRVRE LMEEVSEKEKTLRQSELNVLVSQINPHFLYNTLDTIVWMAEFGDSRKVIALTKSLAAFFR LSLGGGREMVTVADELEHVRQYLYIQKERYEEKLSYEISAPEELMDYTVPKIILQPVVEN SIYHGIKPMDGPGKVTVTVQEDGDRLVFTVADNGVGFDTAAPAGKDASRKNGVGLQNVDG RLKLLYGPDYGVTVDSAPGAGCTVRLTVGRQVKSVPSVR >gi|224461045|gb|GG657759.1| GENE 1192 1237170 - 1237949 841 259 aa, chain - ## HITS:1 COG:FN0189 KEGG:ns NR:ns ## COG: FN0189 COG4753 # Protein_GI_number: 19703534 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Fusobacterium nucleatum # 1 250 1 252 261 198 41.0 8e-51 MYQLLVVDDESIIRRGIRTFIDFDGLGISRLFEAENGEEAIAILEEEQIDLILADINMPK MDGLEFCRRAKERDPSVKAAVITGYDYLDYAIRAIKVGVDDYVLKPLSRDDIQTLLFRLV EKKKEADSLAAVRQEVNKLAAGAGAGGDAGVRAQMAKSLEEHLTDAGFSLSAMADELGYS ISYLSTLFKKHFGANFRDYFLDLRLGRAKILLLSTRMKNYEIAAAVGIDDPNYFSVCFRR KYGKTPTAFRTEAGHGKEA >gi|224461045|gb|GG657759.1| GENE 1193 1238073 - 1239218 944 381 aa, chain - ## HITS:1 COG:HI1455_2 KEGG:ns NR:ns ## COG: HI1455_2 COG0229 # Protein_GI_number: 16273361 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Haemophilus influenzae # 235 378 1 144 148 208 65.0 1e-53 MKKRWMISPGVGILAIIMTVLAGCSAAPHNTTNTKGDAGGSPAGKEEKMTVKEEDLHTIY LAGGCFWGLEAYMKKLPGVYDTDVGYANGTTEDPTYEEVCYKNTGHAETVKVVYDTSRIS TEQILDGFFKVVDPTSVDRQGNDRGSQYRSGIYYTDEADKDVADAAVARQQENYKKKIAT EVMPLDNFYLAEDYHQDYLDKNPGGYCHINLGDADEFIEEEGLGKTDLSSLIKAEDYPAP SDKDLKKKLTDIQYSVTQSGDTERPYTNEYTGQFDKGVYVDVVTGEPLFSSEDKFESGCG WPSFSKPLIPEVVTEKTDTQFNMTRTEVRSRAGDSHLGHVFEDGPAETGGLRYCINSASL RFIPYEDLEAEGYGYLLQIFE >gi|224461045|gb|GG657759.1| GENE 1194 1239380 - 1239571 98 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569085|ref|ZP_03778110.1| ## NR: gi|225569085|ref|ZP_03778110.1| hypothetical protein CLOHYLEM_05165 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05165 [Clostridium hylemonae DSM 15053] # 1 63 6 68 68 84 100.0 3e-15 MIKKKIYKLFLILMVSLSLTSGPAAQNEIRKVLETLSGKGSVQVQELDEEEPEETEKRRK YYS >gi|224461045|gb|GG657759.1| GENE 1195 1240062 - 1240520 457 152 aa, chain - ## HITS:1 COG:CAC0547 KEGG:ns NR:ns ## COG: CAC0547 COG0346 # Protein_GI_number: 15893837 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Clostridium acetobutylicum # 1 152 1 154 159 144 45.0 8e-35 MKFELPLLAVQDVEVSKKFYKELFEQEVVLDLGRNVTFSGGFAIQQDFAWLTDIDPDSVI RNSHNMELYFEVDDFDEFLNLLEKHKEVELVHSPKKHEWQQRVVRIYDPDYHMIEIGESM EVIAKRYLSQGLSVEEVSEIIQHPVEFVQQCL >gi|224461045|gb|GG657759.1| GENE 1196 1240573 - 1240986 200 137 aa, chain - ## HITS:1 COG:no KEGG:Clole_2554 NR:ns ## KEGG: Clole_2554 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 1 134 1 134 139 155 49.0 7e-37 MYERMLDKQNRPAFDDMAAYCGKGMERFVRINEWLLNVCNTTQEISFPYGNNYGWAVAHR KKKKLICNVFAENGAFTVMIRLSNEQYHLIYDQMEKETKECIDNKYPCGDGGWLHYRVTG EAHYCDIQKMLEIKCAS >gi|224461045|gb|GG657759.1| GENE 1197 1241049 - 1241507 364 152 aa, chain - ## HITS:1 COG:no KEGG:ELI_2084 NR:ns ## KEGG: ELI_2084 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 152 1 152 152 209 65.0 2e-53 MKDFFEALTSERKNTALPEEFNYFGKLIGSWKINYVESDNSRTIEGEWHFAWVLEGMAVQ DVIILPGYEYGTSLRIYNPDTHTWDVAYGYTGKIIRLEARKQDEMIVLTYINDEKRKWVF VKIDDDKFHWQNVTVKDDGEWYINAQIHAERI >gi|224461045|gb|GG657759.1| GENE 1198 1241674 - 1242168 196 164 aa, chain - ## HITS:1 COG:mll5006 KEGG:ns NR:ns ## COG: mll5006 COG1670 # Protein_GI_number: 13474178 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Mesorhizobium loti # 9 159 8 156 173 58 27.0 4e-09 MRKVVKEDMIQLRKMEQTDLPIFKKWLYTPHVARWYHDPLDWIDEVEEQDGEFCWIHHFI VEHEGQPIGFCQYYACKDSDELWEGYTELGGSYSIDYMIGESDCLRNGFGKMIVAELTNR IAHHPDAKRIVVQPEPENKASCGLLLSCGFVLDTEKEIYVKLLP >gi|224461045|gb|GG657759.1| GENE 1199 1242268 - 1242633 130 121 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569091|ref|ZP_03778116.1| ## NR: gi|225569091|ref|ZP_03778116.1| hypothetical protein CLOHYLEM_05171 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05171 [Clostridium hylemonae DSM 15053] # 1 121 24 144 144 182 100.0 7e-45 MYNCLILFAAILAIIRWISAFNNEIVVINAEINSHISNFALSLIFYLGVGFTWILQKMTF KKIIILGLFIIIANIICETVMGFMNTTDIIDAIYGIVGTLLGFCYLLLVNKYGLENIHDE S >gi|224461045|gb|GG657759.1| GENE 1200 1242895 - 1243371 200 158 aa, chain - ## HITS:1 COG:alr0739 KEGG:ns NR:ns ## COG: alr0739 COG4430 # Protein_GI_number: 17228234 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 4 157 41 191 193 80 36.0 1e-15 MFGKAGGPKTIKAGQALEEALCFGWIDGQMEKIDDKTYKKYFSLRRKNSKWSEKNKALVK NLEERGLMTDFGRKKIDEAKKNGQWEASNPLAIITEEQIACLSALLEGYEPAYTNFQAMS PSVKKTYTRAYLDAKTDAGREKRIIWMVDRLNRNLKPM >gi|224461045|gb|GG657759.1| GENE 1201 1243489 - 1243563 69 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASNLEFVEYVCDQIGSAGSIACL >gi|224461045|gb|GG657759.1| GENE 1202 1243569 - 1243832 188 87 aa, chain - ## HITS:1 COG:no KEGG:Clole_3888 NR:ns ## KEGG: Clole_3888 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 1 85 1 85 85 105 69.0 4e-22 MIESRCGILCGECGYREKTGCKGCVHIDKPFWGDSCPVKDCCETRGHEHCGQCGEFPCAL LKQFAYDEKQGDGGKRIEQCERWVKGS >gi|224461045|gb|GG657759.1| GENE 1203 1243915 - 1244745 399 276 aa, chain - ## HITS:1 COG:no KEGG:Ccel_2016 NR:ns ## KEGG: Ccel_2016 # Name: not_defined # Def: AraC family transcriptional regulator # Organism: C.cellulolyticum # Pathway: not_defined # 9 276 8 279 279 186 34.0 1e-45 MTPKFITQYCPLTARPFLRNRTYEEHIPCKPLRPYVRCFWSSEGTEGDRDEQLIRVIPDT CMDIIIDMNYTKQTVKSMLYGIQDDTVMVGQGKEKETVLRFAVRFPFWAVRRFLKLDMNG LCNQALDLELLMPGCNTEFEKLLYCRSLEELIACMETYLLGIFQPEGYNPNLYNSIEYLL RSKGRARVSDICGYSAVSQRQMERMFKQEVGISIKRTASLVRYQNVWREVILKEHFNVQE AVERYGYADQSHLLNEFKRFHGLWPSQARLEALESR >gi|224461045|gb|GG657759.1| GENE 1204 1245035 - 1245322 357 95 aa, chain - ## HITS:1 COG:no KEGG:Spico_0255 NR:ns ## KEGG: Spico_0255 # Name: not_defined # Def: hypothetical protein # Organism: S.coccoides # Pathway: not_defined # 3 91 165 253 258 130 67.0 1e-29 MDRKVYEFDAVIEPVPDKGGAYVRFPYDIRKEFGRGRVKAEITFDGVIYHGSIVNMGIKN KDGSICYIIGIRRDIREKIGKQPGDSVVVTVEALD >gi|224461045|gb|GG657759.1| GENE 1205 1245303 - 1245716 311 137 aa, chain - ## HITS:1 COG:SMa0277 KEGG:ns NR:ns ## COG: SMa0277 COG4898 # Protein_GI_number: 16262600 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 1 115 1 115 116 129 54.0 1e-30 MDKGKIYNMDFKKIYPLLVSKAEKKGRSMNEVDQVINWLTGYSAGEIKKAAASSMTYGDF FRNAPRPNPDRYMIKGTVCGVRVEDIEEPLMREIRYLDKLVDELAKGKPMEKILRTPQQR ERLAEGREKISDGQKGL >gi|224461045|gb|GG657759.1| GENE 1206 1245915 - 1246736 401 273 aa, chain - ## HITS:1 COG:BS_bltR_1 KEGG:ns NR:ns ## COG: BS_bltR_1 COG0789 # Protein_GI_number: 16079711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 1 108 1 108 124 80 41.0 3e-15 MLKEKNTLFTIGQFAVLHEINKKTLMWYDEIGLLKPACIKKNGYRYYSYQQSATLETILM LRELNVSLDEIKRFMGHRTIESFDYLLKSKIAELSQTISHLKSMQKVLCNHQQDMEMLRS LDISTISLVQKQSCYLVTVPVTPDSSFDEEIEQVITETKKYQLRRLHDASYGSMLPVENL YQRKFDEYTSLYIEIPYPISKKGLHLQPSGTYLRAFYKGSWDKISDKYKEILAYVDKQGF SLYGFAYETGINEFVIDTIDEYITQIEIPVRLE >gi|224461045|gb|GG657759.1| GENE 1207 1246821 - 1248152 1021 443 aa, chain + ## HITS:1 COG:BH4045 KEGG:ns NR:ns ## COG: BH4045 COG0534 # Protein_GI_number: 15616607 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 1 443 1 446 447 273 41.0 7e-73 MQSENAYSQPVTLKNVLKFAIPTIVMTAFMSFYTMVDGLFVSNLIGTDALSAVNLTAPII ALVTAVSTMLATGGSAVIMKKMGEQKTREAKEDFTFLIIVNVIAGFVMSCLGYLMMDTIF KSLALSPKVFSYCQLYLSRYLIFTIPILLMNNFTLYMIAAGKSALSMVCSIAGGILNMML DYIFIALLDMGIAGAAIATGLGYSVTAVVGIVMFSNKNCLLHFVKPVYRSKTLLHASTNG SSEMATALVTGIVTMMFNWTMLKYVGENGVAAITIIMYVLMFATSLYTGYSYGVAPMISF YYGEQNHEKLKKLIRMSLKIIGAIAAVTLVVSLAVTQPLVSVFARPDNPVYGLAVTGNRI CSFALIVIGFNVFASGMFTALSNGLISAVLAFSRSFVFMVIAMLILPAIYGVTGVWLATP VAEVMAICLSGVMFVKYRKKYQY >gi|224461045|gb|GG657759.1| GENE 1208 1248201 - 1249226 1141 341 aa, chain - ## HITS:1 COG:CAC2283 KEGG:ns NR:ns ## COG: CAC2283 COG0809 # Protein_GI_number: 15895551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Clostridium acetobutylicum # 1 340 1 340 341 459 61.0 1e-129 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESGLVSHHVFKDITDYLHRGDCLVIND TKVIPARLVGSRIGTDARIEVLLLKRKENDIWETLVKPGKKAKIGTKISFGEGILTGEVI DVVEEGNRLIQFSYEGIFEEILDRLGQMPLPPYITHQLEDKNRYQTVYAKHSGSAAAPTA GLHFTPELLEEIQKKGVDIARVTLHVGLGTFRPVKADDILEHHMHSEFFQIDEAAAMKIN KAKDTGGKVICVGTTSCRTIESAADKTGHITAKSGWTDIFIYPGYEFKLLDGLITNFHLP ESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMYIG >gi|224461045|gb|GG657759.1| GENE 1209 1249256 - 1249996 601 246 aa, chain - ## HITS:1 COG:BS_yteJ KEGG:ns NR:ns ## COG: BS_yteJ COG1714 # Protein_GI_number: 16080004 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Bacillus subtilis # 12 150 26 158 164 82 36.0 5e-16 MQNSYNNGQVTYAGFWVRAAAYVIDSVLVFFGLLIVRLIMSGVMSLTEGTVLSGDILFQY TLKDIALYIAQVLYFILCTYYTGTTLGKRAMNLRVVAEGEKKLTFFNVVYRETVGRFLSA IILHIGYIIAGIDPQKRALHDILCDTRVIYGRRVKVYPVYQRPVPPAAPMGPGGYQRQGM PAPGPGPSVQEQKPPCEPGQAPPHESKQLPPLSQQRPPYQKEPVQTGYHMVEPEQDPQAG QGEDKQ >gi|224461045|gb|GG657759.1| GENE 1210 1249977 - 1250954 1299 325 aa, chain - ## HITS:1 COG:BS_yteI KEGG:ns NR:ns ## COG: BS_yteI COG0616 # Protein_GI_number: 16080005 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Bacillus subtilis # 1 319 1 331 335 182 37.0 9e-46 MNKKQMGGLILAVVLFIATGVISVLTNVTAQNRLADVAGEILTGGYELNAPNSDYIAVVK VEGTIQEQTASSLFETAEGYQHTTTMEYIDFLMSDSDNTGILLYVDSPGGTVYESEELYQ KLNEYKDATGRPIWGYMAHYAASGGYYVSMAADNIYANPNTVTGSIGVIMAGYDMSGLYE KLGIRYVSITSGKNKDSSKLDEDQIAIYQTQVDESFGRFVDIVADGRDMSSDEVKKLADG RTYTAKQAKENGLIDNISLYEDIKADMGSELGTNVFYELKSKTSALASLFGSVKELVPKS EAQVLTETASEKENGGLMYYAEQLQ >gi|224461045|gb|GG657759.1| GENE 1211 1250972 - 1253392 2700 806 aa, chain - ## HITS:1 COG:CAC2356_2 KEGG:ns NR:ns ## COG: CAC2356_2 COG0072 # Protein_GI_number: 15895623 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Clostridium acetobutylicum # 153 805 1 654 654 595 47.0 1e-169 MNTSLSWIKAYVPGLEADAQEYTDAMTLSGTKVEGYEELDADLDKIIVGQIDKIEKHPDA DKLIICQVNIGDGSVQIVTGASNVQEGDKVPVVLAGGRVAGGHEPGTRVAGGIKIKKGKL RGVESDGMMCSIEELGSNRDMYPEAPEEGIYIFSEEAEPGADAVELLGLHDVVFEYEVTS NRVDCYSVIGIAREAAATFGKEFVPPEVKATGNEEDVNDYIKVTVKNTDLCPRYCARVVK NIKIGPSPKWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIEDREIIVRTAG ADEKFTTLDGQERQMDESVLMICDGQKSIGIAGIMGGENSMITDDVKTMLFEAACFDGTN IRKSSKKVGLRTDASGKFEKGLDPNNAQAAIDRACQLVEELGAGEVVGGIVDVYGKKKEP VRVPFDADEINALLGTDISREDMIRYLKRVDLIYDETSGEIIAPTFRHDIFRMADLAEEV ARFYGYDNIPTTLPHGEATTGKLSFKLRVEEVARDVAEFCGFSQGMNYSFESPKVFDKLM IPADSPLRNTVEIMNPLGEDYSIMRTTPLNGMLTSLATNYNRRNKNVRLYELGNIYLPKS LPPTELPEERMQFTLGMYGDGDFFSMKGVVEEFFEKAGLHKKETYRPDAGRPYLHPGRQA DIFYDGTRVGYIGEVHPDVADTYGIGEKAYIAVIDMPEIVERATFDRKYTGIARFPAVTR DISMVMPKEILAGQIEEVIENKGGSYLESYALFDLYEGAQIKQGYKSVAYSIVFRAKDKT LEDAEVSEAMNRILKALEGMGIELRK >gi|224461045|gb|GG657759.1| GENE 1212 1253411 - 1254430 1211 339 aa, chain - ## HITS:1 COG:CAC2357 KEGG:ns NR:ns ## COG: CAC2357 COG0016 # Protein_GI_number: 15895624 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Clostridium acetobutylicum # 1 339 1 339 339 452 60.0 1e-127 MKEKLQSIKEEALRAIEAADMPEKLNDVRVRFLGKKGELTAVLKGMKDVAPEERPKVGQL VNETRAAIEEVMEDTRKKMERAIREEKMKQEVIDVTLPSRKNMAGHRHPNTIALEEVERI FVGMGYEVVEGPEVEYDLYNFEKLNIPADHPAKDEQDTFYINKDIVLRTQTSPVQARVME QGKLPIRMIAPGRVFRSDEVDATHSPSFHQIEGLVIDKNISFADLKGTLEVFAKELFGAE TKTKFRPHHFPFTEPSAEVDVSCFKCGGKGCRFCKGSGWIEILGCGMVHPHVLEMCGIDP ETYSGFAFGVGLERIALLKYEIDDMRLLYENDIRFLKQF >gi|224461045|gb|GG657759.1| GENE 1213 1254510 - 1254575 56 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHVTHLSVRLYGRESGWYREL >gi|224461045|gb|GG657759.1| GENE 1214 1254783 - 1255634 724 283 aa, chain - ## HITS:1 COG:BS_yfkH KEGG:ns NR:ns ## COG: BS_yfkH COG1295 # Protein_GI_number: 16077857 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 12 271 5 265 275 139 33.0 4e-33 MKSYRKLYKKGKEISQEVTDDHVGAYAAQSAFFFMLCLIPIILLLITMVQYTPVTKADVM TAVIRVFPSSVDSLITSIVNQVYNQSSGIIPVTVIVALWSAGKGVLAMTGGLNCVYNCRE TRNYLVLRIRATLYTVMFILVIIFLLVLSVFGNTLNIFIAEHIPILSGLADWLIRTRVYI MPVVLVVFSLLIYKFLPNRKDSLKKQIPGAVFAAIGWMIVSWIFSVYVDIFKGFSDMYGS LTTIVLIMLWMYFCMYSILLGGEINILMYDKILTGSSGKKARS >gi|224461045|gb|GG657759.1| GENE 1215 1255756 - 1256328 685 190 aa, chain + ## HITS:1 COG:lin1998 KEGG:ns NR:ns ## COG: lin1998 COG0503 # Protein_GI_number: 16801064 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 190 1 190 192 176 51.0 2e-44 MQLLKERIVKDGTVKPGNVLKVDSFLNHQMDIDLINEIGKEFRRRFPSDKITKILTIEAS GIGIACIAAQYFHVPVVFAKKAQSINIDGEVYHTKVESFTHKKVYDVILSKKFLDADDHV LVIDDFLANGCALMGLLDIIKEAGATIEGAGIVVEKGFQQGGQIIRQNGIHLESLAIIET MTDTSLTFRE >gi|224461045|gb|GG657759.1| GENE 1216 1256308 - 1258509 1415 733 aa, chain - ## HITS:1 COG:BH2971_2 KEGG:ns NR:ns ## COG: BH2971_2 COG2200 # Protein_GI_number: 15615533 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Bacillus halodurans # 481 724 10 251 251 163 36.0 1e-39 MWKRRWIVLSVIVIFIIAVMVFKTLDLKKTLERSMEGYASDVSDQLTGGISSQFASSLTA ASLLADHASEYQDSQELADTLMKETEKTEFDSYAVIFSDGTAIYGDGAAEDLKTMPAIQD SFGKGPSVDCVEGQNLLFSVPLCRDGTVNGVFVGVRRKENMQALIQSESFAGKGLNCIVD SEGTVVISPTDVKPFLQLDDIFRSDTEDRSDITKMRDDWAAGRPGVYSFTAVDKSRLIMS YCPLGVNGWMLLTLVPADLLSQETDTYVFHTFFCLAGIILACGLFLAMVLRFYRVGRREM EKAAFTDPLTGGMNEAAFRMKYRSLAEKAPACTHAVIFLNIKNFKMMNENFGMKTGNDIL IHIYKKIMENIREGETDARAGADHFFICMRENREDVIQSRVTRMTEAMNAFNEHAAIEYH LSAQWGVCVVDEPDLNIAVIQDRARIACRQYDGNSACCFYTPAMTQKIREEHELNALFDG SVENHDFQIYMQPKVRLSDGRPGGAEVLVRWFHPQKGRILPSEFIPLFEKSDNICRLDLY VFEEMCIFLYRCMQDNRELLPVSVNLSRVHFKNLNFLSEFVALKEKYRIPDGIIEIELTE SILFDEQQRELVKETIVKMHEQGFLCSLDDFGVGFSSLALLKDFDIDTIKLDREFFMDIT NSKARSIITGFIRLAKDMGIHVVAEGIETQEQIDFLKEADCELVQGYYYSKPLTVVKFEE WTASPRRLFPEGE >gi|224461045|gb|GG657759.1| GENE 1217 1258702 - 1260162 660 486 aa, chain + ## HITS:1 COG:SPy2099 KEGG:ns NR:ns ## COG: SPy2099 COG2188 # Protein_GI_number: 15675854 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 255 317 4 66 237 60 49.0 1e-08 MNVKKTLAEHVYGELKEQIVSGRLKYGDRLPSMNSLCVFYNVGIRTVKDVMRRLKEEGYI RTEERKAAAVIYKAAPEDSGIHSVLQRKTSILAVHETIYILIPLLLSFSASLFDEEELRQ MTRRITTLRRRHPKASEQACRNCIYTMLERSHNLLFRDLFSSLETYARLPFFQDHGRFLE LVQEYNEFDSTAWVMDSIPSRDAHEITRRFRLMFKAVSSAIRRYLDEMHIRYGDVLEETS VEYAWAAERGRDHYYTQIVRDLINKIGTGFYKEGAFLPSEAALARQYKVSVSTVRRALSM LGELGFSKTLNGKGTVVFLQSDSSTFQCMKNKTYRRDTMLYLSGVQLMAIAVHPAALLAF DHIDRQTIQKLRQRTSRTGSIPLADLTRCVIDNQTLKPMKTILQELEKLMNWGYYFSFFS EGPSHADLLTKYSLTALEHLAGGRKDAFASSLSECYCHILSFVRDFMSRCGLPEAAGLLT PGIVSI >gi|224461045|gb|GG657759.1| GENE 1218 1260229 - 1261554 1360 441 aa, chain - ## HITS:1 COG:sll1283 KEGG:ns NR:ns ## COG: sll1283 COG2385 # Protein_GI_number: 16329811 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Synechocystis # 146 440 127 386 391 126 33.0 1e-28 MRHRRKEKYLYYGLAILVTLFIIVGLVSALKGTDIRKGTGTPGKEKKSEESKGGRSEEKT AIDNPNIRVLIMDNGYSNIVHPAVTVSSDKGMTLTCGEEKEDWDKPDSLTIAPDDARFQK GTIRIQAKEGKVTLSSIKRGYGTPSYSGVIELRTTAEGIVIINELPVETYLCGVVPSEMP ASYELEALKVQAVCARSYAYRQMADYGYPEYEAHVNDSTDYQVYGNSKEQESTSKAVAET AGQVVRYQGEVVTTYYYSTSCGKTTSMEAWGTAPNDSNGYLQSVNVSDGKADYEKGLPWY RWEASVPIQTLSDLVGLNTGTDVGTLSSVEVTKKGPGDVALQIKATGSSGSVTVETENKI RRALGGKGYQITKQDGTVIDSSALLPSAFFTVEKTSDAFVIKGGGYGHGIGMSQNGANEM AKQGKDYKEILTLFFHDVTIE >gi|224461045|gb|GG657759.1| GENE 1219 1261822 - 1261884 67 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MILGKPGMHDNSCNFEPTKL >gi|224461045|gb|GG657759.1| GENE 1220 1261967 - 1263658 1604 563 aa, chain - ## HITS:1 COG:APE0033 KEGG:ns NR:ns ## COG: APE0033 COG1866 # Protein_GI_number: 14600399 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Aeropyrum pernix # 179 494 113 434 493 65 25.0 3e-10 MATKAYYPISEIGAGKTGFSKTRSIIEAAFYGNNVVPVNTLKEAYNLAKNSPGTIVTDMP VYRGEEFGLDSDARVLLFNDGAVTGRYAGARRIKGEPGVDAAKLDKVTMDAVYESRWKTM YHATVYVGLDTEFMVKAHLLIPEGEENIMYNWMLNFQYMSDEYVKMYKNSKAVGDGKEPD IYIFSDPQWFPQDRPDVDYSCLSDPLTLCYFDTAENCACILGMRYFGEHKKGTLTMAWAI ANRNGYASCHGGQKEYTLSDGSKYVASVFGLSGSGKSTLTHAKHNGKYPITVLHDDAFII NTDTCASVALEPTYFDKTADYPTGCEDNKYLLSAQNCSATLDEDGKIQLVTEDIRNGNGR AIKSKLWSPNRVDKIDAPVNAIFWIMKDPTIPPVVKLKGSALASVMGATLATKTSTAERV AAGTDLNALRIVPYANPFRTYPLVNDYEKFKKLVEEKDVDCYIVNTGDFMGKKVQPKDTL GILEAIVERRADFKQWGPFEDIEIMEWEGFVPDLNDADYKAQLKNAMLNRVNAVEKFSTA KDGYDKLPDEALAALNKLVEELA >gi|224461045|gb|GG657759.1| GENE 1221 1263851 - 1264195 502 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569115|ref|ZP_03778140.1| ## NR: gi|225569115|ref|ZP_03778140.1| hypothetical protein CLOHYLEM_05195 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05195 [Clostridium hylemonae DSM 15053] # 1 114 1 114 114 204 100.0 2e-51 MLDGIFGIFGLGCGLYCLYAFFMMKTKKEINTTILLPKDARFKKCKDVDAYCREMSAPLL TLGIIVTAYGALDLYNSYMGGIGILFLIMFALVWVALIWFFVAVRKCNKKYFGV >gi|224461045|gb|GG657759.1| GENE 1222 1264210 - 1265700 1767 496 aa, chain - ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 2 493 3 494 496 601 60.0 1e-171 MNLHYKSTRNSNLKAAASEAVLKGLAPDGGLFVPERIPALDIPMDKLKDMSYQETAYEVM KLFLTDFTEEELKDCIGRAYDSKFDTEEIAPLTKVDDTYYLELFHGSTIAFKDMALSILP YLMTTAAKKNNVENEIVILAATSGDTGKAAMAGFADVEGTRIIVFYPKNGVSRVQELQMV TQKGKNVDVVAIHGNFDNAQSGVKEMFENEELAGKLAENGYQFSSANSINIGRLIPQVVY YVYAYAKLLEGEELSEGEKINVVVPTGNFGNILAAYYARQMGVPIDHLVCASNENKVLFD FFRTGTYDRNRDFVLTTSPSMDILISSNLERLIYLVTGEDSEQTAAFMSELKSGGSYTLT EEMKEKLKDFKAGYATQEQTSRQIRHIWDGTGYVLDTHTAVASYVCDEYRKTSGDSGKCL IVSTASPFKFVKSVMTSIDSKYGEEDEFRLLEELKKVSGVEMPRAIADILDADVLHRTEC DADKMEVTVKEILNIQ >gi|224461045|gb|GG657759.1| GENE 1223 1265714 - 1266988 1495 424 aa, chain - ## HITS:1 COG:SA2117 KEGG:ns NR:ns ## COG: SA2117 COG1757 # Protein_GI_number: 15927906 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Staphylococcus aureus N315 # 3 424 26 448 459 343 48.0 5e-94 MGNERGNGAALLPIGIFLVIFLGSGIVTGDFYAMPAIVAFLIALFAAFIQNRGLSFQEKI SVIAKGVGDENIITMSLIFLCAGGFSGAVTAAGGVESTVSFGLSILPAKIAVVGLFVIGC FISVSMGTSMGTIAALAPIAAGISEETGFSLAICIGAVVCGAMFGDNLSMISDTTIAAVK TQGCEMKDKFRENFLIVLPAAIITIIIFLVITRNGSASVAVGGYNILRVIPYILVLVGAL IGMNVFVVLIGGTVVSLVVGVGTGSLAAGEMFSAVGKGVTGMYDITVISIVVACIVSLVK EYGGIQFILNLIRRSIKGQRGGEAGIAGLSLLVDMCTANNTVAIVMAGPIAKDISEEFDI SPRRSASLLDIFTSVGQGLIPYGAQLLSAASLTGLTPFNIMPYLFYPILMAISAILFIAF RKAK >gi|224461045|gb|GG657759.1| GENE 1224 1267004 - 1267495 591 163 aa, chain - ## HITS:1 COG:PAB0892 KEGG:ns NR:ns ## COG: PAB0892 COG0066 # Protein_GI_number: 14521550 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pyrococcus abyssi # 1 157 1 157 164 225 66.0 3e-59 MRASGHVFKYGDNVDTDVIIPARYLNSFDGKELASHAMVDIDPEFAGKVKPGDMIVARKN FGCGSSREHAPLCLKEAGVSCVIAETFARIFYRNAINIGLPIIECPEAAQGIEAGDEVEV DFDSGMIYNKTKDKSFQGQPFPEFMQKLIAAGGLVNYTNGKKR >gi|224461045|gb|GG657759.1| GENE 1225 1267495 - 1268769 1438 424 aa, chain - ## HITS:1 COG:CAC3173 KEGG:ns NR:ns ## COG: CAC3173 COG0065 # Protein_GI_number: 15896421 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Clostridium acetobutylicum # 3 420 5 420 422 546 67.0 1e-155 MGMTMTQKILAAHAGLDHVEAGQLIEAKLDVVMANDITGPMAVPVFNQMADKVFDREKVV LVPDHFTPNKDIKSAENSKSIREFARAQGLTHYYEVGQMGIEHALLPEKGITVAGECIIG ADSHTCTYGALGAFSTGVGTTDIATGMATGELWFKVPSAIKFVLSNKPSRYVSGKDIIIH IIGKIGVDGALYKSMEFTGKGISNLSMDDRFTMANMAIEAGAKNGIFIVDEQAETYMKEH SDKSYTIYEADEDAVYDEVVEIDLSKVRPTVAFPHLPGNAKTIDEIEAMEPVRIDQVVIG SCTNGRMEDMRRAAAVLKGHKVHPDVRAMIIPATQKIYKQCISEGLVDIFIDAGCAFNTP SCGPCMGGHMGVLAAGEKCVSTTNRNFVGRMGHVDSLIYLASPEVAAASAIAGHIANPEK AGDR >gi|224461045|gb|GG657759.1| GENE 1226 1268791 - 1270317 1315 508 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_3569 NR:ns ## KEGG: EUBREC_3569 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 43 303 268 530 2109 82 27.0 6e-14 MKYVARQWRLFASGLFLLLFCLILKGEARAASVTLEQGEAVYYQGYSTHYYYIDGVLGYC LEPGKVPPSDGSYDSQVIDNSQLLSKAMYYVYGGPGYETHMKPALAQVWQTKENAYCLSH CVLSYIYDGMSGDSDAFIGLNEEMKDQVVRCASWIREWPAIPKPDIAFSGTEFQSWFDRE GKQQRTDEITCVGDADNSMTVPLPEGVWLVNVTKGTRTSGNVAVSGGDRFYLSADAGLFN GERYESGELYGSRRQAWRTLVIKPGESGQNIGAGRLVTVGTAPASLAVSWLPKPELETKK QADKTGKTYKLGDVITYTIEVTQRIQDAVAKNVVISDTILTEGVKLQKNSVVLLDAGQRT VPDAVISAEGNTYTIRSGQSLEFLQSVEKGEKFYVEYQVVITDASVIGREIENEVVVRAD NADEVKDRETVTVEEPEEPKEPQEEPKEIPEEVKKEPEQPEEKPAPKVTVKAEAVKTGDE ESLMVLIILLILSCAAITACGKIARKTK >gi|224461045|gb|GG657759.1| GENE 1227 1270570 - 1272036 1598 488 aa, chain + ## HITS:1 COG:MA0901 KEGG:ns NR:ns ## COG: MA0901 COG0733 # Protein_GI_number: 20089780 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Methanosarcina acetivorans str.C2A # 4 455 9 456 459 476 56.0 1e-134 MNTREKFSSRLGFLLISAGCAVGLGNVWRFPYITGQYGGAAFVLIYLVFLVLLGLPIMTM EYSVGRASQKSAARSFEELEPEGTKWHFIKLVPLVGNYMLMMFYTTVGGWMLAYFFKTAA GSLSGKNAQQINASFSGFLASPSQQVLWMLVVTVIGFFICSRGLRNGVEKISKYMMGALF LVMIVLVVHSFLLSGAKEGLAFYLIPDFGRALEHYSLGEIIFAALGQAFFTLSLGIGALA IFGSYIGKDHSLVSESLNVVVLDTLVALFSGLIIFPACFTYNIDAGSGPGLIFVTLPATF NEMAGGRVWGSLFFAFMAFAALTTIIAVFENIVAFAMDFGWTRKKAVAVNAVVVILLSLP CALGFNLLSGFQPFGAGSTVQDLEDFIVSNTLLPLGSLLYLLFCTYRYGWGWKNYSQEVN SGKGLKLPNWTKGYISYVLPLIVIFILVDGYLEKLGFPANYLLPVFCLIYPGYLMVQSYM VHRKKKKL >gi|224461045|gb|GG657759.1| GENE 1228 1272031 - 1272102 69 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNAAMPVLPDISGSAAEAAFAL >gi|224461045|gb|GG657759.1| GENE 1229 1272102 - 1272995 782 297 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 30 283 1 250 270 166 34.0 5e-41 MDIIPLFDVNGNVKYTIKTIKQRQKRSGSMQIYFFILYFFTYGFLGWCTEVAFATTKQHK FVNRGFLNGPICPIYGVGVGIVVQFLAPVKDNLILLYLTSTVLVTLIEWITGFLMDKIFH HKWWDYTGQPLNIGGYVCLVFSLVWGVACVFIVKVVHPLIHKGLSFIPEVVGIVIIAVLG AVLISDIYVTASGILKLNRRLEMMEKIAAELREFSDKVGENIHENVMETMEVTEGIKEKL ETATEEQMGRVADLKEKYRELAEHGTRVSNRLLKAFPKMESRRHKDILKELQQRLRK >gi|224461045|gb|GG657759.1| GENE 1230 1273043 - 1273273 303 76 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3525 NR:ns ## KEGG: Cphy_3525 # Name: not_defined # Def: FeoA family protein # Organism: C.phytofermentans # Pathway: not_defined # 1 72 1 72 73 65 52.0 9e-10 MTLKQGKNNQTYEVRSIDIELSLERRLEALGLTEGTQITVLNNDKKGSLTAKFRGTRFAM GRRIADHIEIREVKAQ >gi|224461045|gb|GG657759.1| GENE 1231 1273270 - 1275312 2286 680 aa, chain + ## HITS:1 COG:MJ0566 KEGG:ns NR:ns ## COG: MJ0566 COG0370 # Protein_GI_number: 15668746 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Methanococcus jannaschii # 3 680 2 667 668 483 38.0 1e-136 MRKTINVGFIGNPNCGKTTLFNAFTGANLKVANWPGVTVEKKEGRATYKGQEFKLIDLPG IYSLTSYTMEETVSRECIMSDDVDVIVDVIDASSLERNLYLTLQLIELGKPVVLALNMMD IVEERGMEIDLHRLPEMLGVPAIPVSARKKTGLSILMHAVSHHKEYDRQGPLIHHHPGLK YSHRHNHHDEYAMVYEDYIEDKIDLIIAELSRCYPDLENKRWHAIKILEQDKGVTNAYPL ELGNTVDRSYEKDIINQKYNFIEEIIAEVLVNKSRKEASTDKIDRILTSRWLGLPIFLGI MALVFFFTFTIGDWLKGYFEIGLEALSAAVSSGLAAVNTGEMMTSLVVDGIISGVGGILT FLPNIFILFLALAFLEDSGYMARVAFVMDDIMSKLGLSGRAFLPLLLGFGCSVPAIMASR ALEHKRDRFKTILVTPFMSCSARLPIYVLFSSMFFGKHAMLVCYSMYVLGIIVAIATAFI LSRIDGSRAEHALLIELPEYKAPNARTIAIYVWEKIKDYLTKAGTVIFIASVIMWVILNF GPGGYVTDITESFGSIIGRAVVPVFRPAGLGQWQIIVALIAGIAAKEVVVSSCSVLFGIQ NITTAHGMGTMVTTLGSMGFGALNAYALMVFCLLYVPCTATIATMHRELKSWKGTLGIVL FQLVTAWTMSTIIFQIGKLF >gi|224461045|gb|GG657759.1| GENE 1232 1275373 - 1276740 1277 455 aa, chain - ## HITS:1 COG:alr3672 KEGG:ns NR:ns ## COG: alr3672 COG1012 # Protein_GI_number: 17231164 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Nostoc sp. PCC 7120 # 5 454 10 458 460 527 50.0 1e-149 MTDYKEIIRKQREYFREGECKSVGFRIAQLQRMNAWICKNEEAIMETLHKDLHKSPFEAY ATEIGIVKEEIKYTLKHLRRWAKPRRVPTPLTQFPSSSFIYPEPYGAVLIMSPWNYPFQL TVAPLVGAICAGNCAVVKPSAYSPHTSDIVARMIRELFPEKYVSVITGGRKENEALLNER FDYIFFTGSVNVGKYVMEKASKHLTPVSLELGGKSPCIVDETADIKLAAKRIVWGKFLNS GQTCVAPDYILVQKSVKDKLLKQIEKYIYKMYGKDACHNPEYPKMINDKHFDRVLGLMRG THIVCGGGSRSDTRQIEPTVVDQVNWDSPVMQEEIFGPVLPVLTFYDIKEAAAMVNARPR PLALYLFTKEKRREAYILRNVSYGGGCINDTVVHLATSHMPFGGVGNSGMGGYHGKASFD TFTHEKSIMKKSLLIDIPVRYAPFKNKLNILKKLQ >gi|224461045|gb|GG657759.1| GENE 1233 1276751 - 1277944 1423 397 aa, chain - ## HITS:1 COG:CAP0059 KEGG:ns NR:ns ## COG: CAP0059 COG1454 # Protein_GI_number: 15004763 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 6 396 8 396 396 385 50.0 1e-106 MMCRLFQKVMKFVMDRVPFWRKPKMITGRDSLKKLPAIIQKKGIKNVLLVTDPGISALGL HRQLVEWIREAGIHCTVYDKTVANPTIANVEEALALYREHDCHAIIAFGGGSPMDCAKGV GARVARPRKKISSMRGELKILKPIPLLIAIPTTAGTGSETTLAAVLTNEKTHEKYAVNDF VLIPRYAVLDPVLTRGLPKHITAATGMDALTHAVEAYIGRSNTAETIEDSVSAVKLIFRN LEKAYRDGEDMEAREKMQKASFLAGAAFTRAYVGYVHAIAHSLGGEYGIPHGLANAVILP YVLDAYGSSIYIQLAELADIVRIGQEFEEDQAKAEAFIAEIRAMNRRMGLPEKLEGIRED DIDMLAKRAAREANPLYPVPKIMKKAQLKEIYYQIRA >gi|224461045|gb|GG657759.1| GENE 1234 1278061 - 1278885 925 274 aa, chain - ## HITS:1 COG:no KEGG:Metev_1246 NR:ns ## KEGG: Metev_1246 # Name: not_defined # Def: phosphoresterase PHP domain-containing protein # Organism: M.evestigatum # Pathway: not_defined # 1 186 1 171 221 82 33.0 2e-14 MKIDMHCHVKEGSVDSRVSLDEYITKLKENGFDGMLITDHDTYKGYRHWKNSMKGKVHDD FVVLKGIEYDTCDAGHIICIMPEGVKMRLLELRGLPVAVLIDFVHRHGGILGPAHPCGEK YLSFTNTKKFYKSPEIIKRFDFVEAFNSCEPEESNEGAAKLARKYKKPGIGGSDSHKLDC VGRGYTVLPEHVTCETELISLIRRKVPVEAGGMLYNKTTKDKIGKVNKLLVYSFWFYNKG GELLKRHRRRQKGQVENPVDPIDPIEIPYLERMK >gi|224461045|gb|GG657759.1| GENE 1235 1278967 - 1279152 274 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569128|ref|ZP_03778153.1| ## NR: gi|225569128|ref|ZP_03778153.1| hypothetical protein CLOHYLEM_05208 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05208 [Clostridium hylemonae DSM 15053] # 1 61 1 61 61 97 100.0 2e-19 MYRILKIVLLTAGIMMQAASVVLFGFTEIHISEYLYMAVWVLCGILIKYLLQSLSPDGKA N >gi|224461045|gb|GG657759.1| GENE 1236 1279215 - 1279940 1092 241 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569129|ref|ZP_03778154.1| ## NR: gi|225569129|ref|ZP_03778154.1| hypothetical protein CLOHYLEM_05209 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05209 [Clostridium hylemonae DSM 15053] # 1 229 1 229 241 287 100.0 6e-76 MEMVNLNDIIGNALDGTSKLTGSGAVQGTTALIVAAAIGILVCLFGLKLVKILTAAAGAV IGAGIGVSVAVGLGLTKITFLAVVIAGAVILGAMAFFLYKFGVFLMVLAYVFGVCAMLLK PDSLIPLIISIAVAVVFAVLAVIFIEPLVIIVTGLSGGVSAGVAAAELAGLAANAWIGFG IGIVMAVIGISVQFMMHSRKIGKTEKVHAKKYKEQVSRETEVEKARMILDDDAEEKEDDE D >gi|224461045|gb|GG657759.1| GENE 1237 1279990 - 1280985 933 331 aa, chain - ## HITS:1 COG:no KEGG:Closa_2784 NR:ns ## KEGG: Closa_2784 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 327 1 327 331 306 48.0 1e-81 MPKAYNQKIKLLFLMDLLERQTDTEHSITMKEILTAMEANGIQAARKSIYSDIETLRQYG MDIEYKKEQPEGYYLASHCFELPELKLLVDAVQSSRFITEKKSRSLIKKIEALASRHEAS CLQRQVYVSDRIKTMNESIYYNVDKIHAAISGNSKIRFQYTQWTLDKTTVLRNEGKFYYI SPWALNWTEENYYLIGYDADKNALRHFRVDKMLKIEVLKENREGAEIFRDFDPARYSKKT FGMFAGKEETVSIRFPNRLIGVVIDRFGKSAAVKRDGDGFFTARVQVAVSEQFFGWLTGL GKDVIIVSPEAVAGEHRRLLQGIIDTYACGT >gi|224461045|gb|GG657759.1| GENE 1238 1281736 - 1282530 875 264 aa, chain - ## HITS:1 COG:STM0386 KEGG:ns NR:ns ## COG: STM0386 COG0345 # Protein_GI_number: 16763766 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Salmonella typhimurium LT2 # 2 264 4 266 269 250 52.0 2e-66 MKLGFIGTGNMASAIMGGIIEKQIIPAEEIIGADLFAPGREKARTQFGIHVTDSNKEVVE KAEVIVLSVKPQFYEDVINEIKGDIKDDQIIITIAPGKTLAWLEEKFGRPVKIVRTMPNT PAMVGEGMTAACPNEHMDDKGMEYVKTLLQSFSQVEVVPERLMDAVVSVSGSSPAYVFVL IEAMADAAVSGGMPRPQAYKFAAQAVLGSAKMVLETGKHPGELKDMVCSPAGTTIEAVRV LEERGFRSAVIEAMKVCEDISRSL >gi|224461045|gb|GG657759.1| GENE 1239 1282794 - 1283441 815 215 aa, chain + ## HITS:1 COG:mlr4749 KEGG:ns NR:ns ## COG: mlr4749 COG1802 # Protein_GI_number: 13473980 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 9 189 29 210 248 74 26.0 2e-13 MAEKTISLADQAYEKIKSNILKLSYPPGMSLTEAMLTKELGMSRSPVRTAIRMLQAEGLI VTDYYKSMTVKEITDKDINEIYQLRELLEGEAFKMIFSEKRHEEFSYRIEEKIVRMCAAA GDVYEWEVADTAMHMEIVSIFENERINKIYESNLSELIRMGQYSIKNGMHIPKTNENLKK MVRYMRKGDYERSFEILKADHFGIGKNSALKKNSV >gi|224461045|gb|GG657759.1| GENE 1240 1283512 - 1284426 520 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 302 1 306 306 204 37 1e-50 MYDIVIVGGGTAGMTAAIYGLRAGKKVLLIEGTTFGGQITLSPHVENYPGIAEVSGSEFA TAMAEQVSALGAELEYTKVKAVRKDGGNKIVVTEDAEIPCRTVILATGVTHRHLGVPREE ALVGAGVSYCAVCDGAFFKGSDVAVVGGGSTALQDAVFLSEYCSHVYVIHRRDEFRGEKH LVASLSERENVSFVLDSVVSEIKGTDAVESVGILNKKTGEASELKVEGVFIAVGQKPNND PFEETVKLNEEGYILAAEDCMTSCPGIFAAGDCRTKEVRQLTTAAADGSVAALAACRYIE EMGV >gi|224461045|gb|GG657759.1| GENE 1241 1284452 - 1286818 2510 788 aa, chain - ## HITS:1 COG:RSp0963 KEGG:ns NR:ns ## COG: RSp0963 COG1328 # Protein_GI_number: 17549184 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Ralstonia solanacearum # 3 652 5 649 683 726 51.0 0 MYQVTKRDGQIAKFDITKISEAISKAFAAQEKEYNQDIIDLLALKVTADFEPKIKNSLVQ VEDIQDSVEAVLIKAGYADVAKGYILYRKQREKIRNLNSTMLDYREIVDSYVKVTDWRVK ENSTVTYSVGGLILSNSGAITANYWLSEIYDDEIGQAHRDADIHIHDLSMLTGYCAGWSL KQLIQEGLGGIPGKISSSPAKHLSVLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAPFVKV DDLQYEDVKKCIESFIYGVNTPSRWGTQAPFSNITLDWTVPNDLVNMPAIVGGKEMDFTY GDCKREMDLVNKAFIQIMIEGDAHGRGFQYPIPTYSITSDFDWSETENNKLLFEMTAKYG TPYFSNYINSDMEPSDVRSMCCRLRLDLRELRKKSGGFFGSGESTGSVGVVTINMPRIAY QSADEEEFFTRLDKMMDIAARSLHVKRSVITKLLDEGLYPYTKRYLGTFDNHFSTIGLIG MNEAGLNAKWIGKDMTDTATQEFSKKVLNHMRERLSGYQEEYGELYNLEATPAESTTYRF AKHDVAQFPDIITAAEGDGTPYYTNSSHLPVGYTEDIFEALDIQDELQTLYTSGTVFHAF LGEKLPDWKSAASLVKKIAENYRLPYYTMSPTYSICKNHGYINGEEYSCPECGETTEVYS RITGYYRPVQNWNDGKSQEFKDRKVYDLSHSKLHITSKSGEHIDEVPKQEAGEPQKILFT TKTCPNCTMAKAMLEKAHIDYMLVDAEEHADLVEKYGIKQAPTLIVIDENGVEKLANASN IKKYTESN >gi|224461045|gb|GG657759.1| GENE 1242 1286989 - 1287681 705 230 aa, chain - ## HITS:1 COG:MTH1586 KEGG:ns NR:ns ## COG: MTH1586 COG1180 # Protein_GI_number: 15679581 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Methanothermobacter thermautotrophicus # 5 192 7 186 233 115 38.0 1e-25 MVIQGLQKLTLLDYPGKVACTIFTAGCNFRCPFCHNASLVVDTYKNEEITQEEVSAFLKK RMGVLDGVCVTGGEPLIQSDIEPFLRQIKEMGYAVKLDTNGSFPDKLKRLVDEKLVDYVA MDIKNSQESYGKTIGIRDYDIRNIHRSVQYLLSDAVPYEFRTTVVLEFHQRSDFESIGRW IRGAQRYYLQQFVDSGDLIQEGLHGYNREIMEQALEVVEKYVQTAEIRGL >gi|224461045|gb|GG657759.1| GENE 1243 1287761 - 1288396 726 211 aa, chain - ## HITS:1 COG:CAC2605 KEGG:ns NR:ns ## COG: CAC2605 COG1309 # Protein_GI_number: 15895863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 24 210 12 192 194 80 27.0 2e-15 MFYIHIYRQEERKRDDMGKSEDKKGVKSRIVSAAWQLFHDKGYNGTTVDDIIELSGTSKG SFYYYFNTKDELLNTLAFILDDYYEELEQKMDTGMNSFVKLLYLNAEMHAMMEEKISLDL LASLYSTQLVADGQVHLLDSNRKYYKLITKVVEEGQRRGQIRADRTVREIVKYYAMCERA LVSDWCLNKGSYSLTRYSRECMPVMMEHFKA >gi|224461045|gb|GG657759.1| GENE 1244 1288453 - 1288740 393 95 aa, chain - ## HITS:1 COG:CAC2830 KEGG:ns NR:ns ## COG: CAC2830 COG1254 # Protein_GI_number: 15896085 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Clostridium acetobutylicum # 13 85 4 79 91 59 47.0 1e-09 MESGDKMAEIRRRYVFKGRVQGVGFRYTAKYLARSLGLTGWVQNEWDGTVTMEVQGREPM INKLLTGINNNSFIEIDWIDWEGIPLEREAGFESR >gi|224461045|gb|GG657759.1| GENE 1245 1288872 - 1291247 2929 791 aa, chain - ## HITS:1 COG:SPy2049 KEGG:ns NR:ns ## COG: SPy2049 COG1882 # Protein_GI_number: 15675819 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pyogenes M1 GAS # 6 790 12 805 805 436 35.0 1e-121 MEERGMNERIRKLRKLSLDTPAHIDMERAESMTKTYETYEGALSVPELRAQVLKDYFAAK TLYIGEGELIVGEKGDSPQASPTFPELCCHTMEDMHVMNDRELISFKVKEKDFETQEKVM IPFWDKRCIRNKILRQMTPEWKKAYEAGLFTEFMEQRGPGHTVGSVKIYEKGFLDYKEDI QASIDKLDFFHDPEALDKKNELEGMKIACDAIMILGERYAALARDLAQKETDPKRREELL QIAANCDVVPAHKPETYWQAIQMYWFVHLGVTSELNPWDAYSPGRLDQHLNPFYEKDVEA GVLDDEKALELLECLWVKFNNQPAPPKVGITLKESSTYTDFANLNTGGIAPNGENGVNNV SYLILDCMDEMKLLQPSSNVQISRKTPQKFLKRACEISRKGWGQPAFYNTEAIVQELLNA GKSLEDARRGGTSGCVETGAFGNEAYILTGYFNIPKIFELTLNNGYDKVSGQQLGLELGY AADFETYEELYDAFKKQMKYFIDIKVQGSNVIEKIYAENMPVPFLSIITNDCISKGKDYN GGGARYNTKYLQGVGIGTITDCLAAVKYNVYEKKTFTMEELMQALEDNFEGHDRIWNIVC NKTPKYGNDDDYADSIMKDVFEYYRSQVTGRPNMLGGMYRINMLPTTCHVYFGDVMMASP NGRLAHKPVSEGISPEKGADTNGPTSVVKSCAKMDHLQTGGTLLNQKFTPSVVAGEEGLD QMANLVRTYFNMDGHHIQFNVIDKETLIQAQEHPEDYKDLIVRVAGYSDHFRNLSKALQD EIIERTEQSFS >gi|224461045|gb|GG657759.1| GENE 1246 1291252 - 1292160 956 302 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 4 302 8 300 302 208 38.0 1e-53 MSLITSIQKYSIHDGDGIRTTVFFKGCLLKCLWCHNPETQCFKPQLLCDSERCAGCGSCA VVCPQNAVREEAGKMVTDRKLCTGCGTCVDSCNLNLREVAGKEYTVSELVKELRKDEMFY EESGGGVTLSGGEVMMADMDYVEELVKRLDRMGISVAIDTCGQAPYENFERLLPYTDTFL YDIKTMDNEIHKKYMGMGNEQILENLERISSKGARIYIRIPVIREVNGTKEDMEEIIRYL REKQIRVANINLLPYHNTGSGKYEKLGLTYGGTKLHAPSGEEMEQFVTLFKQSGFQNVKI GG >gi|224461045|gb|GG657759.1| GENE 1247 1292317 - 1293273 860 318 aa, chain - ## HITS:1 COG:no KEGG:DSY1098 NR:ns ## KEGG: DSY1098 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 305 1 317 317 305 47.0 2e-81 MIISASRRTDIPACYPDWFVNRLKAGEILVPNPYNRKKISRIALSPDTVDCIVFWTKNPE PLLPGLKEIDRLGYRYCFQMTVTDYEKDMEENIPSTEESMATFVLLAERLGRERVDWRFD PIILSGKYTLGYHLEKFEMMCEWLHNYTDRCIISFMDGCRENPYPEMEEEDMLEAAKGLS EIAGKYKLPLYTCAEKINLERYGIHHSACIDKEKIRKIIGYKLDLKKDAGQRKECRCAES IDIGMYDTCVNGCRYCYATGGAESAKKKHAQHDPESPLLVGHLRGDETIVERKVQSGRDM QISLFDLPYGVGAPKDAL >gi|224461045|gb|GG657759.1| GENE 1248 1293367 - 1293990 760 207 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_2714 NR:ns ## KEGG: CDR20291_2714 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 106 1 106 277 93 40.0 5e-18 MTIKEVENLVDMKKANIRYYEDEGLLAPERNKENNYREYSMQDVEDLKKIKFLRVLGVPV KDIKLVKEGKRTVSDVVGMRKAALERELAELSEARGLCDELMHRNDTFDELDVTLMDMQN DFFKMRGVKIMKLDKIYRLESYRNMCNRIWQTVFLIYMPVMLSLKFVFHYELPFWLSVPL MFSALAAVAVMGVIDYRIEHYKEDSMS >gi|224461045|gb|GG657759.1| GENE 1249 1294137 - 1294685 195 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 19 171 16 174 190 79 36 6e-13 MNERKLSIQDICTISLCTAVTAIMAQISIPMPMGVPMTMQTFAVTLAAVILGAKKGAAAS LIYVLLGAAGVPVLANFTGGYQYLIGPTGGFLLTFPVMAYIIGLGAEKFRRANSGFIICL ILGTAVNYIGGIAMFCLVTGSSVWAGFTACVLPFIPTAVIKAGLAAAIGLKIHRRLVSAA CV >gi|224461045|gb|GG657759.1| GENE 1250 1294676 - 1295065 334 129 aa, chain + ## HITS:1 COG:CAC3455 KEGG:ns NR:ns ## COG: CAC3455 COG3543 # Protein_GI_number: 15896695 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 125 2 126 129 123 44.0 9e-29 MRLRPHHLLCTQGYSGKGYSPEFVKNMDAVVRRLRTEQKTPIELVFSTDDLCSCCPDMLA CDLCRENEKVKRFDRKTAEYFGLEEKTYIYQELTAHIRSHITPEILEDICGGCSWYPVSA CRKNITGKK >gi|224461045|gb|GG657759.1| GENE 1251 1295174 - 1295710 780 178 aa, chain - ## HITS:1 COG:lin0808 KEGG:ns NR:ns ## COG: lin0808 COG0317 # Protein_GI_number: 16799882 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Listeria innocua # 1 174 1 175 180 95 33.0 3e-20 MIDKAIEFATRAHEGQFRKGTRRPYIVHPVEVGDIVSTMTKDEEVISAAVLHDTIEDCEG ITEEVLAKEFSVRVAVMVAQESEDKSKTWVERKGATIRHIGRSPVEVQMIGLADKLSNMR DIDRDYPVEGEKLWERFRMKDKAMIGWYYKGIRDALADSFGGVEAYEEYCRLVEKNFG >gi|224461045|gb|GG657759.1| GENE 1252 1295741 - 1299529 4162 1262 aa, chain - ## HITS:1 COG:BH3816 KEGG:ns NR:ns ## COG: BH3816 COG0841 # Protein_GI_number: 15616378 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Bacillus halodurans # 390 1261 155 1022 1093 423 32.0 1e-118 MLSKFSVKRPYTVVVGVVLIIILGIVSFGNMTVDLLPSMNLPYAIVMTTYPGASPEEVET VVTKPVEQTMATVSNIKNVQSVSNENASTVILEFDQTANMDSVTIEMREGLDQISGFWPD EVTNPIIMKLNPSMMPVLITAVSASGEDAAETTRIIEEQVLPEVESVEGVASVSTAGSIE ETVQVTVNEQKVEALNEDVKAALEEKMNEAASALQQAKDQVANGKAALAAGKAQASSGVG EAEAQISQKAEEIKQAQLEITEKMAELNVTDTQLQQSLAAVQASKAAAEAQLKTVNVSCD QLQAQMADLQKDPAANADAIAQLQTEIDNCNATKAALEAAIAQLTEQEASLKEGQGKVTA GRQQLEAVQKQVNNGAMSLAEARGQLASAQVQAAAGLGEGAAQLAAGEAMIQSQEAQMEA AKGEASASADLSGMLNADMVKTLLAAENFSMPAGYVTENGLDYLVRVGDKFKSIEDIKNL VLIDMEGIDPVKLTDVANVELVSNSDETYAKINGKSGMMLSIQKQTGYSTGDVSDRVLEK LQSISKEHKEINAVTLMDQGVYIDLIVNSVLKNLLYGAVLAIIILLVFLKSIRPTFVIAC SIPISIMTALVAMYFSGVTLNIISLSGLALGVGMLVDNSIVVIENIYRMRNEEGASAKTA AIEGARQVGGAITASTFTTICVFLPIVFTSGITRQLFVDMGLTIAYSLLASLIVALTLVP MISAGLLKKTEEKESRLFIRIKDWYGSMLSKALNRKVLVLAGAFVLFVASGALAISRGTE FMPQMESTEISMTLEMEKGTSLEDTAKAADKVMDRVGGLKDVKDIGAMVSSSNMMGTSSS SNMVEFYAITGDKPSMSNNELKKEIEKVTKDMDGELTVNMSNMDMSALGSSGINVQIKGK DLDKLQKIAGDIKSMLEDIKGTQNVTDGTEDNKEELRVIVDKTKATEHGLTVAQVYQSLN KRLSEAQKATSLSTDTEDFDIYVVDDADESLSREDIRKLTVTAEKQDGTSEEVKLSDIAA FEDASGLQAISRKDQSRYMSVTSEVKDGDNIGLVSSRVNKALKAYDVPDGYEVKMVGEDE TINESMTELFKMLGLALVFMYLIMVAQFQSLRSPFIVMFTVPLAFTGGLFGLWIAGKAVS VIAMVGFVMLSGIIVNNGIVFIDYTNQLIAGGLSRHDALVEAGRTRLRPIIMTALTTILG LSTLAVGVGMGADMVQPMAIVTIGGLIYGTILTLVVVPCIFDLFHKREKARLREEIEEDA ET >gi|224461045|gb|GG657759.1| GENE 1253 1299738 - 1300463 226 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 239 4 238 242 91 29 1e-16 MSKYVLITGASRGIGKAAAVLFAARGYHVFINCRRSAGALEEVKREIISAGGSCDMVTGD VGDPEDVDKIFSFIYSRCGCLDVLINNAGCAHIGLLSDMTDGEWSRVIQTNLSSVFYCSR AAVPPMVRRKQGRIINISSMWGTLGASCEAAYSASKAGVHGLTKALAKELAPSSIQVNAL ACGVIDTEMNAQLDEEERLALADEIPAGRFGTPAETAEMIWNIATAPPYMTGQIIGIDGG F >gi|224461045|gb|GG657759.1| GENE 1254 1300460 - 1301212 778 250 aa, chain - ## HITS:1 COG:CAC0222 KEGG:ns NR:ns ## COG: CAC0222 COG0708 # Protein_GI_number: 15893514 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Clostridium acetobutylicum # 1 247 1 247 250 395 74.0 1e-110 MKCISWNVNGIRACVQKGFMDFFQEADADIFCIQETKMQEGQLELETPGYFQYWNYAERK GYSGTAVFTKKEPLSFTCGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYRM EWEDAFLAYLKKLEEKKPVIFCGDLNVAAEEIDLKNPKTNRKNAGFTDEEREKFRKIKAS GFVDTFRYFYPDEEGIYSWWSYRFRAREKNAGWRIDYFCVSQSLKERLEDARIHTDVMGS DHCPVELDLC >gi|224461045|gb|GG657759.1| GENE 1255 1301242 - 1301976 699 244 aa, chain - ## HITS:1 COG:CAC3099 KEGG:ns NR:ns ## COG: CAC3099 COG0101 # Protein_GI_number: 15896350 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Clostridium acetobutylicum # 1 244 1 244 244 173 39.0 2e-43 MRTYKLTVSYDGSRYQGWQRQATTDNTIQFVLEWSIGKLVGYRVHVDGSGRTDAGVHARG QVASVKLSKLYDPQEFKDSLNRYLPEDIRIVKAELVKNGFHARKSAKGKKYEYYIDCREK PDVFSRRYCYHYPEKLDIEAMRNAVEYLVGVKNFTSFTDDKECRDPVRRITNIKIVSTGD KVRITYYGTGFLYHMVRILTGTLLEIGTGKRDSAMLPVVIAAEDRSLAGFLAPARGLFLR KVYY >gi|224461045|gb|GG657759.1| GENE 1256 1302221 - 1302742 495 173 aa, chain - ## HITS:1 COG:lin1597 KEGG:ns NR:ns ## COG: lin1597 COG1327 # Protein_GI_number: 16800665 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Listeria innocua # 24 172 1 149 154 166 56.0 2e-41 MLFDFCPYSRYTICITEERIWVKMKCPYCNHLDTRVIDSRPAEDGSSIRRRRSCDVCGKR FTTYEKVETIPLIIIKKDNNREQYNRKKIENGVLRACYKRPVSADAIQKTVDAIETKIFS LEAKEIPSSTIGEIVMEEMKSLDEVAYVRFASVYREFKDVNTFMDELKKILDN >gi|224461045|gb|GG657759.1| GENE 1257 1302758 - 1303000 353 80 aa, chain - ## HITS:1 COG:BS_ylmC KEGG:ns NR:ns ## COG: BS_ylmC COG1873 # Protein_GI_number: 16078600 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 77 2 78 81 62 41.0 2e-10 MRLSELQDKEVINTCDCKRLGFVADLILDDCGCHVEAIIIPKSGKFCGFFGDGSEYVIPC KCIKRIGPDVILVEIHEEKK >gi|224461045|gb|GG657759.1| GENE 1258 1303124 - 1304338 1542 404 aa, chain - ## HITS:1 COG:CAC3550 KEGG:ns NR:ns ## COG: CAC3550 COG1668 # Protein_GI_number: 15896786 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Clostridium acetobutylicum # 7 365 8 352 392 95 25.0 2e-19 MNGIKQIFGKEMARIFKDKKMVFSVFFLPVLIMVLIMTIISGLITNMEDDIESHEAVVYV ANEPSSFEAFLGESRQEFKSKRIDGGGMEKAKEDILEGRADLIIEFPDSFESAVRDYEPG MAVPQVKTYYNPSEDYSKAAYEEISGGVLEAYRQTLLAGRVGDLTQLTVFTVNSDNDEMI IQDDDKASGKAIGMMLPYFITILLFAGAMGIGTDMIAGEKERGTMASLLVSPVKRSSIVL GKVFSLMTISGISSLIYVIAMVVCAPLMMKSMTGSGADGLNISLSVQQVVMLGALLVAIA FLYSSIIALISVFAKSTKEASTYVMPAYMLVLVVGLLTMFTTGDPTQTDYYIPLYNSALV MKGILGQNVSMLQYGITLIETLVIGGVLLGVIVKAFQSEKVMNV >gi|224461045|gb|GG657759.1| GENE 1259 1304340 - 1305113 353 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 21 235 11 225 311 140 34 3e-31 MIEIKNLTKIYKLNKKQMLESKTKNPKKTAVDNLSLTAREGEIYGLLGPNGAGKTTTLRC IATLIKPSDGEIYVGGHEVQKEPEAVRESIGFLTSDIKLDEQFDVDYMFGFFGRLHNVPQ DVLEKRKEELFTYFGIKDFAHKQIKELSTGMKQKAAIAVSLVHDPDIVIFDEPTNGLDIV TARSVTDYLRKLREDGKLVIVSTHIMSEAEKLCDRIGVIIDGSKVAEGSLQELLNMTGTD DLEDAFFELYKERKGEM >gi|224461045|gb|GG657759.1| GENE 1260 1305189 - 1305638 433 149 aa, chain - ## HITS:1 COG:no KEGG:CA_C3323 NR:ns ## KEGG: CA_C3323 # Name: not_defined # Def: hypothetical protein # Organism: C.acetobutylicum # Pathway: not_defined # 1 143 1 142 148 65 32.0 8e-10 MEEYRKKLKRSIILESIFALVSVAVIVISYMRADAMDPSEHAGSFFQGFQAGLFTVWAGV MFYGIFVSAKALGSREYLRKLYIKEHDERTIEICTKGQAKAYRTCIAVFMTAAVIAGYYN YIVFYTLVVVTAFSAVCGGVMKIITSRSL >gi|224461045|gb|GG657759.1| GENE 1261 1305641 - 1305847 305 68 aa, chain - ## HITS:1 COG:CAC3324 KEGG:ns NR:ns ## COG: CAC3324 COG1476 # Protein_GI_number: 15896567 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 67 1 67 69 93 82.0 9e-20 MKTRIQELRKAHKLSQEELAMAVGVTRQTIISLEREKYTASLVLAYKIARFFGVMIEDVF DFSDVEDI >gi|224461045|gb|GG657759.1| GENE 1262 1306010 - 1306195 280 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569158|ref|ZP_03778183.1| ## NR: gi|225569158|ref|ZP_03778183.1| hypothetical protein CLOHYLEM_05238 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05238 [Clostridium hylemonae DSM 15053] # 1 61 1 61 61 93 100.0 4e-18 MKARVNEGCISCGACVAVCPEVFRFDDDGIAEAYADVAPECESTAKDARDGCPVSVIDIE E >gi|224461045|gb|GG657759.1| GENE 1263 1306256 - 1307185 1146 309 aa, chain - ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 308 1 308 310 303 53.0 4e-82 MKKRVVVALGHRALGTTLPEQKEAVKYTAGTIAGLIEAGYQVAVTHSNAPQVGMIHTAMN EFGRVHQDYTAAPMSVCSAMSQGYIGYDLQNGIREELLNRGIYRTVSTILTQVVVDPYDE AFYTPTKVLGRYMTAEEANEERRKGNYVVEEPGKGYRRVVSAPNPVSIVEIDAVKALMDA DQIVIACGGGGIPVLQQDNHLKGASAVIEKDLAAGKMAEEIDADELIILTSVEKVKINIG RPEEEELGEITLEQAKEYMEAGHFGKYNMLPKFSASVAFIEKREGRSALITSFDKLEEAL KGKTGTVIK >gi|224461045|gb|GG657759.1| GENE 1264 1307669 - 1307824 142 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569161|ref|ZP_03778186.1| ## NR: gi|225569161|ref|ZP_03778186.1| hypothetical protein CLOHYLEM_05242 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05242 [Clostridium hylemonae DSM 15053] # 1 51 1 51 51 87 100.0 2e-16 MASYVAPAIRDKFESLSINLKNCILERDVRLENIHDLIHVLEDIVKDGEAE >gi|224461045|gb|GG657759.1| GENE 1265 1307980 - 1308309 328 109 aa, chain + ## HITS:1 COG:no KEGG:ABC2457 NR:ns ## KEGG: ABC2457 # Name: spo0A # Def: stage 0 sporulation protein A # Organism: B.clausii # Pathway: Two-component system [PATH:bcl02020] # 4 107 153 259 263 73 34.0 2e-12 MEEINSLIFKLGIRSTYQGFYYLQYALHLCMLDERYLLSVYKSLYVDVARKYNTSRDNVE HCIRTVVSNCWYKGNQNFLVQIAGYPITQKPTNGEFIDILYHYLKAQEN >gi|224461045|gb|GG657759.1| GENE 1266 1308451 - 1309773 879 440 aa, chain - ## HITS:1 COG:no KEGG:Tlet_1253 NR:ns ## KEGG: Tlet_1253 # Name: not_defined # Def: peptidase S41 # Organism: T.lettingae # Pathway: not_defined # 50 422 29 439 465 132 27.0 4e-29 MENRNKTLGKVLLAIFTIMILFFAAYQIWMNPHRGTAEEAEASLAVDDMLTKEQAVEDID YILSHIESRHPACIKGLPDEVKRQGDKEKEAMGSSVSMLELWRSISRIMARMKDGHTSVM PYYAQTVPRLLFRCRKTGENLICVGGEYDGSRILSIGGVREEDLYKTFLGLSSYELEGFA SVLYENRIVRKDYLRFLGADVSEDTAVVLETPAGQVEKTLRFENKNINPQDTEPFVSYHV YEEKNTAVLTLKECIYDEMYANTLREFFTEVKKKQIENIAVDVRDNGGGNSKVINEFLRY INVDNYYVYGDVDVRYGPFLITDKKEKIANERGGELVFDGTIYILTSSGTFSAATDFAVA IADNKLGYVVGEVSGGMPSSYGDLLQFQTPNAKLMFTVSYKYFHRPDSGNDKKPLEPDYP VEAEEALQKVYELARRSGQE >gi|224461045|gb|GG657759.1| GENE 1267 1309906 - 1310967 759 353 aa, chain - ## HITS:1 COG:no KEGG:RCIX233 NR:ns ## KEGG: RCIX233 # Name: not_defined # Def: hypothetical protein # Organism: RC-I_MRE50 # Pathway: not_defined # 1 346 1 331 338 141 28.0 4e-32 MESIVKNFKPQGGRHCITNSLKQIFTYYGYPMSEEMIFGLASGLSFLYMNFSTAPMVNGR IKVFEFEKKLAERLNITIKCRSGKNYARVSDAAKRMIDADDPVLIYVDMPYMSYLGMDRD SHFGGHAVVLYGYDDLKKKYRISDRDNHDNPIRIPGGRTAEDYHLVSFRELEEARSSSHR PFPANNKYLTFDFSGYTNVGKDVLQEAITETCQGMLTPPARLLGMSGIMKFSREILRWEK FSPDKLKKTGMVNYFQINEAGGTGGGLFRRMYGGFLLEASDILQNDKVAHAGRQFIRVSE QWDDLADDLWQLSLEGDTALLKKMSDSIQHIYSVENNLYLSLMEAAGKIGDTL >gi|224461045|gb|GG657759.1| GENE 1268 1310979 - 1311779 656 266 aa, chain - ## HITS:1 COG:BS_ydfL_1 KEGG:ns NR:ns ## COG: BS_ydfL_1 COG0789 # Protein_GI_number: 16077613 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 2 107 5 105 117 65 31.0 1e-10 MYRISQFSKISGLTVKALRYYDEEGILKPSFRNEENQYRYYSDEDLKKARLISFLRSLDF SIMEIREIADTVENEAELAFILQEKAEFIKNNIAREKELLQKIGRNVFLPGTGHPVNAYQ IGTVDIGGVFAASIRFTGWYSDMDKYVPLLYKAVGGNRSGRLFNCYYDTACVENADIEIC LPVKNRIAGAHVSCRKLPGLRGLRTVHYGGYDTLYLAYKAMFEFANKHGLKTLTPSREIY VKGPGMIFKGNPANYITEIILPIKFY >gi|224461045|gb|GG657759.1| GENE 1269 1311927 - 1312151 346 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569166|ref|ZP_03778191.1| ## NR: gi|225569166|ref|ZP_03778191.1| hypothetical protein CLOHYLEM_05247 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05247 [Clostridium hylemonae DSM 15053] # 1 74 1 74 74 94 100.0 3e-18 MKKHDILNLKEFDDCRTLAEVRAKYREFHDILFGRACGAIDILTDIAGKEEIDEEKIKEI KKKIDERIDQKKNT >gi|224461045|gb|GG657759.1| GENE 1270 1312267 - 1312398 80 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRLKQPLFARDYKEVGKEPGNRLLCHVFWVQNETMTITNKIH >gi|224461045|gb|GG657759.1| GENE 1271 1312358 - 1313200 586 280 aa, chain - ## HITS:1 COG:no KEGG:BCZK3470 NR:ns ## KEGG: BCZK3470 # Name: not_defined # Def: triple helix repeat-containing collagen # Organism: B.cereus_ZK # Pathway: not_defined # 57 173 473 589 813 116 62.0 1e-24 MEENTSFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGMNGNWYIGDTDTGVPATGP KGDKGDKGETGATGPQGLTGATGPQGATGPQGLTGPQGPTGATGPQGATGPKGDTGAAGA QGPTGAAGPKGDPGAAGPQGPKGDKGDTGAVGAQGPQGIQGPKGDKGEQGPTGPVNIANN LETTEEGYALDARQGKILKDNIISHTFTNVFTGTSQVIGKVNAYTVPSGYKFLALSTNQT NHTVVAYARFSGTSVTTDVLNIAGTDVNVTVETTIICQRL >gi|224461045|gb|GG657759.1| GENE 1272 1313400 - 1314140 443 246 aa, chain - ## HITS:1 COG:no KEGG:BF1987 NR:ns ## KEGG: BF1987 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis_NCTC9343 # Pathway: not_defined # 9 122 194 309 784 84 44.0 4e-15 MEENTSFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGTNGNWYVGETDTGVPATGP KGDKGDKGEPGPVGPQGVTGAIGPQGLTGPQGLTGPQGPTGATGPQGATGPKGDKGDKGE QGPAGPVNIANNLETTEEGYALDARQGNILNSKMIRISVKTTNQNVGMVTANAAKSFNEF WGVEWTDFVPDLPGYNTYFVSARPDGQSGVILYDNGWIYNANNWGIGANTITGTYVFLFV HKSLII >gi|224461045|gb|GG657759.1| GENE 1273 1314345 - 1314698 233 117 aa, chain + ## HITS:1 COG:no KEGG:Bsph_3503 NR:ns ## KEGG: Bsph_3503 # Name: not_defined # Def: stage 0 sporulation protein A # Organism: L.sphaericus # Pathway: Two-component system [PATH:lsp02020] # 16 109 167 263 274 67 38.0 2e-10 MPVRSKGANMGKARTLLLRLGIRSTLKGFHFLLYAMQLCLSDDMYLLSVYKHLYVDVAAH FGTTRDNVDHCIRTAISNCWYKGNRELFISIAGYELKQKPANGEFIDILYNYLCQKG >gi|224461045|gb|GG657759.1| GENE 1274 1315017 - 1315256 178 79 aa, chain + ## HITS:1 COG:no KEGG:Dhaf_2870 NR:ns ## KEGG: Dhaf_2870 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 5 79 9 83 83 77 56.0 1e-13 MRNNINHADDYIKLGLNIAYYRKLGGLTQLQLAEAVKISRTHLSNIEAPNMPTSVSLDTL FEIAKVLDIPVCMLLMFKE >gi|224461045|gb|GG657759.1| GENE 1275 1315595 - 1315858 257 87 aa, chain - ## HITS:1 COG:no KEGG:CCV52592_2220 NR:ns ## KEGG: CCV52592_2220 # Name: not_defined # Def: prevent-host-death family protein # Organism: C.curvus # Pathway: not_defined # 1 86 1 86 87 89 47.0 6e-17 MPSIIPIKELRDTTKISETCHNTDEPIFITKNGYGDMVLMSMETYNAMTMQSEIDTSITK FENEVVSDTKFLNAQEVLDGLRRKHLG >gi|224461045|gb|GG657759.1| GENE 1276 1316219 - 1316614 437 131 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_4163 NR:ns ## KEGG: Dhaf_4163 # Name: not_defined # Def: HEPN domain protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 7 128 14 135 144 90 40.0 3e-17 MDDRQKDLSRYRLREAQDSLRVAEHCLREELYKDSINRSYYSAFYAVKAVLALGTVDFKR HKDVIAYFNQHYVAAGIFERELGRKLATLKQLREKSDYDDFYIASREQALIQVETARLIL ERVTEYLDALV >gi|224461045|gb|GG657759.1| GENE 1277 1316607 - 1316939 302 110 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2451 NR:ns ## KEGG: EUBREC_2451 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 108 1 108 109 108 51.0 6e-23 MNSIHDILLGFSQDVKRILGDKLTKIILYGSYARGEERVNSDIDIMILTTLTEAEIEKVE TTVFDLAFDYEMRYFVEISVIIKNEEHFNYWLGALPFYDNVKKEGILING >gi|224461045|gb|GG657759.1| GENE 1278 1317000 - 1317179 100 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPFLYSGTGENHVKVLVHVRGNKFSKVYGCQYVANLRLLFQKFEIENRLSAWYNGTTKV >gi|224461045|gb|GG657759.1| GENE 1279 1317504 - 1318301 878 265 aa, chain + ## HITS:1 COG:PA4759 KEGG:ns NR:ns ## COG: PA4759 COG0289 # Protein_GI_number: 15599953 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Pseudomonas aeruginosa # 2 265 3 267 268 191 41.0 1e-48 MKVIVVGPRGKMGKLITQIAAGREDMELIAGVAPKGRDYIGRDLGQVAMTGCDLGAPVVD DLASVIDSCDVIIDFSTKEMAMEVLDLAIASKKALVCGTTGFNAEEMQRFKDASVHIPML YAANTSKLVNVMNKLLEVAAAAIGEEADIEILEMHDQWKKDAPSGTSKEMGEIMARTMGR ELDDIAVYGRHGVSPRENGTIGYHSLRAGNIPSSHTVFFGFMGERLEITHHSYNWECFAR GACDCAAYLSGKQAGFYTIKDVLNL >gi|224461045|gb|GG657759.1| GENE 1280 1318398 - 1318712 332 104 aa, chain + ## HITS:1 COG:MA3383 KEGG:ns NR:ns ## COG: MA3383 COG0393 # Protein_GI_number: 20092197 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 1 104 1 105 106 99 53.0 2e-21 MILVNTDYITGKKFEMIGLVRGTTIQSVHMGKDIMNSFKTLVGGELTSYTEMMNGARAIS TKRMADDAEAMGADAIINIRYTSSQVMQGAAEIMAYGTAVKFID >gi|224461045|gb|GG657759.1| GENE 1281 1318797 - 1319396 619 199 aa, chain - ## HITS:1 COG:no KEGG:Sfum_3306 NR:ns ## KEGG: Sfum_3306 # Name: not_defined # Def: nicotinamide mononucleotide adenylyltransferase # Organism: S.fumaroxidans # Pathway: Nicotinate and nicotinamide metabolism [PATH:sfu00760]; Metabolic pathways [PATH:sfu01100] # 1 170 1 170 186 170 48.0 3e-41 MIETGVVNGRFQVFHLKHMEYLLAAKMRCNKLYIGLTNPDNTYVRETVNDENRSARSANP LTYYERCQMIRGALREFNVPDLEYEFIPFPINRPEYILQYAPQDAVYYMGVCDEWDEEKF KILRSLGLETEILWRREPEEKGVTASWIRSCIATDEEWAHLVPKSVYEYLIGNDLDLRIK RLELIRMAEKDMSLVKDRI >gi|224461045|gb|GG657759.1| GENE 1282 1319493 - 1321073 1770 526 aa, chain - ## HITS:1 COG:BH2384 KEGG:ns NR:ns ## COG: BH2384 COG0513 # Protein_GI_number: 15614947 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Bacillus halodurans # 4 523 6 524 539 479 49.0 1e-135 MDTVRFEELELCPEIMKAVKKMGFEEASPIQAKAIPLVREGRDIIGQAQTGTGKTAAFGI PLLEKIDPKNKKLQAVVLCPTRELAIQVADEIRTLAEYMHGIKVLPIYGGQEIVKQIRSL KSGVQLMIGTPGRVMDHMRRKTVKMEHVHTVVLDEADEMLNMGFREDIETILEGVPQERQ TVLFSATMPKPILDITKKFQKHAEIVKVTKKELTVPNIEQFYYEVKPKNKEEVLSRLLDI YNPKLSVVFCNTKKQVDILVNGLLGRGYFAAGLHGDLKQAQRDRVMQGFRSGKTDILVAT DVAARGIDVDEVEAVFNYDLPQDDEYYVHRIGRTGRAGRVGRSFSFVSGKEVYKLREIQR YCKTKIYAQKVPSLDDVANTKMEKVMEEASRIIEQEDLGTFIQLVQEEINDTDYTSMDIA AALLKMCTGTAEETDVDNFEDTGAEEPGMVRLFINIGKKHKAKPGDILGAIAGESGMPGK VVGTIDMYDKYTFVEVPREYAKEVLSAVNHTKIKGKPVEVEPANRK >gi|224461045|gb|GG657759.1| GENE 1283 1321305 - 1322237 297 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020671|ref|YP_526498.1| ribosomal protein S6 [Saccharophagus degradans 2-40] # 18 294 5 284 293 119 25 9e-25 MSRKRDLTEKSKKTEKNKKNVICLHIAVMLFGVSGVIAQFVDVPAIMVALGRVVSSSLLL LVIALVKKERLRLNCRKDYILIILTGIVMAVHWTTFFQSIQVSTVAVGTITFSTFPLFLT FLEPLVFRERISAGNIMKAVILLIGVVITIPEFSLDNHITVGIIWGMLCSVTYAVMTLAN RYFSGRYAGRIICLYEQGTAAVVLLPALAWVKVSWQFKDVLGVAFIGIICTAFAYSLYVS AQKGVKAQTAGIISGMETVYGVLYALILLGEMPTAREIAGGIVILGVALYSSLRTEEKNT VSQVPATGEV >gi|224461045|gb|GG657759.1| GENE 1284 1322311 - 1323039 180 242 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569184|ref|ZP_03778209.1| ## NR: gi|225569184|ref|ZP_03778209.1| hypothetical protein CLOHYLEM_05266 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05266 [Clostridium hylemonae DSM 15053] # 1 242 49 290 290 425 100.0 1e-117 MRTPKGVKLTENGKKFVEIAQNIIAEYKKIEALSSSDKMVSISFIYLSYILEALLEFQEQ GLLLSNLLRRTEPLETISDVICQKVRIGILPIYQLDLNGFIEKIKQYNLQYLMLFEAVQI YAVVSKTHPLANKKSISISETLKYPLTYYTAVPKKSVLSNIYDSKFSLKVQNRDELFLVL KNNKYFSLLTLTSNSKNPEFCYIPIIDNEFKMNVCAVFLSDTTLTKQEIKLIEFLKNTIH FI >gi|224461045|gb|GG657759.1| GENE 1285 1323307 - 1324464 249 385 aa, chain + ## HITS:1 COG:PAB0873 KEGG:ns NR:ns ## COG: PAB0873 COG1473 # Protein_GI_number: 14521524 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus abyssi # 8 385 8 382 383 265 39.0 1e-70 MYSSIYAESRKMYNELIKWRRELHKVPELGLELPKTVSFIEQKLTEWDIPFETKVNGNCV IGYIGTGDKCLLLRADMDGLPIREESQLPFASQNDNMHACGHDIHTVALLGAAKIIKKHE KELKGRIKLLFQPGEETFEGAKAVIAEGVLENPKVDAAFATHVASVIPVGTIVYGTMTGT SVFGFKITITGKGTHGAMPQNGIDPINVGVHIYQALQELIARECTPSKEVTLTIGQFNSG TANNIIPETAILQGSLRTFDSELKQYLITKIEEIVNNISNAFHAESKIDVLTDIPVLCCD EKRNMEIAKALSSMNTEFNIVSGLHTTGSDDFAVYASKVPSSYFIVGAKADSDNIYAHHN PNVCFNEQVLPIETAVYACVAMDWK >gi|224461045|gb|GG657759.1| GENE 1286 1324514 - 1325752 1323 412 aa, chain - ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 46 398 84 437 450 274 43.0 2e-73 MKTFEELYQAVLERKITLKEPLPSEYDPRHLDCLLHPKRYAPVVQEKECRECAFDRACLR SCIFDAIEIDGDGKARINPSLCTGCGVCIDACEEKRLSAGRDVLPAMKAVREAEGPAYMM VAPAFLGQFGDGISPGQLRMAFKALGFTGMVEVALFADILTLKEALEFDRHVKKQGDYQL TSCCCPVWIAMIRKIYHELMPHVPGAVSPMVACGRMIKRIHPDAVTVFAGPCLAKKKEAR EPDICDAVDHVLTFQEVLDIFKAADIRPEEFEDSRKEHASKAGRLYARTGGVSRAVSEMV EQLRPDRSIAVRGEQANGTKECMAMIQRIKNKETDANFFEGMGCVGGCVGGPKAILDRET GTQLVDEYGQESPFRTPLENPYVRKILEELGIETVEELLRDDTLLTRDFYNP >gi|224461045|gb|GG657759.1| GENE 1287 1325948 - 1326433 701 161 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2242 NR:ns ## KEGG: Sterm_2242 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 9 154 3 149 153 77 30.0 2e-13 MKFTLDKDITYEQAVSRMFEMLGNSQIMALASSLNDYVMVRNVSCLFYDEKIYFKTDKNF RKTKQLLENPNVAMCWSGVQVEGTAVNKGLVAEEPGQRFAQGYRKYLWQSYNKYSHEDTE ILIEVSPKYVEIWDTSDDGYAFQLFIDFEKKELEVKMYDEK >gi|224461045|gb|GG657759.1| GENE 1288 1326446 - 1327108 925 220 aa, chain - ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 32 214 12 192 209 103 35.0 2e-22 MNETNETINVTGGGKVQTRDDARMRVKKIAFIGLMGAVSAVLMLFRFPIPFMPPFLSFDF SGLMEMLGGFMFGPVAALCIIIVKIMLQLVMQGSFSLGTGELQNLILSCTYVLPALLLYH RNKSRKMAVAGMAVSSLLVAVVAVFTNLYLIIPFYVKLFGMSMDDIIAMCSTVNPAVKNA ATMAVFGILPFNLIKYGVTSLVTFIIYKRLSRVIKGVINK >gi|224461045|gb|GG657759.1| GENE 1289 1327419 - 1328183 947 254 aa, chain - ## HITS:1 COG:SA0343 KEGG:ns NR:ns ## COG: SA0343 COG1878 # Protein_GI_number: 15926056 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Staphylococcus aureus N315 # 2 253 4 250 250 216 43.0 5e-56 MYQLWKDLERLKRCRWIELSHPLNNESPYWGGIPDGAVDLSRTVFDWGNDMLDCLIQTFK FPGQFGTHIDFPGHFVKGRELSEKYGVRDMVYPLVVIDISDKVKEDVHYAVTVEDIKAYE EQYGDIPDGAFVALRTDWGKRWPSMDAVCNFDKDGGEHTPGWSMEALKYIYEERNAAANG HETLDTDASALAERAGDLACERYVLGSGKLQVEVLCNLDQVPPAGAIVIAAFPPIEGATG LPARVWAIAPEQED >gi|224461045|gb|GG657759.1| GENE 1290 1328273 - 1329430 1358 385 aa, chain - ## HITS:1 COG:CAC0877 KEGG:ns NR:ns ## COG: CAC0877 COG2230 # Protein_GI_number: 15894164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Clostridium acetobutylicum # 29 383 33 386 391 328 45.0 1e-89 MNEFFTEYLQKIIPVSFNLETAEEFITIGDAVPEFTVKINRDIPKRALLNSTSLALGEAY MREDIDVDKDLFEVLDSFLGEMGKFRVNRGALRRILYTSKNIRSQEKEVTSHYDIGNDFY RLWLDETMSYSCGYFKEESDTLYEAQVNKVEHILDKMYLEEGMTVLDIGCGWGFLLKHAV KNYGVKGIGITLSREQYAKFRKDIEEEGLGDRLDVRLMDYRELKASGLSFDRVVSVGMLE HVGRGNYPLFLECVQSVLKPGGLFLLHYISALQEFPGDAFIKKYIFPGGVIPSLREIIHL MGDRKLYATDVESLRRHYTKTLLCWRENLLRHREEITEKYGREFMRMWELYLASCAATFH NGIIDLHQIVMTNGINNELPMTRVV >gi|224461045|gb|GG657759.1| GENE 1291 1329579 - 1329905 444 108 aa, chain + ## HITS:1 COG:BH0406 KEGG:ns NR:ns ## COG: BH0406 COG1695 # Protein_GI_number: 15612969 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 3 94 69 159 174 110 57.0 9e-25 MDKSQLMKGILEGCILKIIDQSETYGYEIVVKLQENGFQDVKEGTLYPLLLRLEKKKLIL ASYKPSPLGPSRKYYSLTRDGREYLDSFYVNWQETCLSVKRIFKEDKV >gi|224461045|gb|GG657759.1| GENE 1292 1329902 - 1330591 810 229 aa, chain + ## HITS:1 COG:no KEGG:Amet_3017 NR:ns ## KEGG: Amet_3017 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 4 150 2 141 227 67 29.0 5e-10 MNPFRNELKKLDRENDEQSAYIECRDNYVAVQNMVRYLSSSSLSLFQVQIIRKDLIGMAV EGEKEGLTVREKLGVEPKEFCDDIIQSGDNNARREHLLNAVVNTAQFAAFWFTFRFLGFY ANPASYTLTWGDVLTIFLYYFIGIFLATYIRNRLSICSSPVLRWLPYLTIFFVVICGYTL SMKFYTPINESFIIMINGWYVECAAVALALAVTLLANMHWRRCARKYAC >gi|224461045|gb|GG657759.1| GENE 1293 1330681 - 1331358 592 225 aa, chain + ## HITS:1 COG:FN0217 KEGG:ns NR:ns ## COG: FN0217 COG0664 # Protein_GI_number: 19703562 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Fusobacterium nucleatum # 5 219 4 214 217 93 30.0 3e-19 MLKQQEDIKLLKETLTFWNQLTDIQQKMLIESAVSSSYPKGKILHSADYECIGTLIVKSG SLRVYILSEDGREITLYRINDGEICVLSASCVLQSITFDVYIDVVSDCELIQLCSKAFSA IIEGNIYAEAFTYKLTTERFSDVMWAMQQILFMSFDKRLAIFLLDEAASLHSDEIRLTHE QIARLMGSAREVVTRMLKYFSSEGYVELSRGTVRITDKNRLKALV >gi|224461045|gb|GG657759.1| GENE 1294 1331439 - 1332794 1657 451 aa, chain - ## HITS:1 COG:BH3820 KEGG:ns NR:ns ## COG: BH3820 COG1301 # Protein_GI_number: 15616382 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Bacillus halodurans # 11 442 1 400 413 170 31.0 5e-42 MSKEATKKEPMSVVKKMMIALAGGLVVGIGFLLIRQQLTSSGNEAAWNVINKILFQDITV EDGVGAVGIFYIVGQIFMRGLQLAIVPLVLVSLSLAMCSISNSTKLGRIAGRTLAGFFSF YVCGAFLGCVVAYAVKTLGFFNVTLPSEAVTEASTIDAFNPLAVIVNAVPSNITEAFSTN NSILAVVVVAIIIGLCMNKLGDKAAPLKKVLESANEVIQMYLTFLINKVGPVAIFCLISR TFAIYGVEYLAPAAAYVVSAMLTLFLLVVILYPTGIYLATKMNPFKFLKKIAKVGVFGFS TNSSAACLPLNTRTCIDELGCSEEVTSFVLPTGMTINMNGTTVMHMFAVTFIATSAGIDV TPANLIVMAFLSICAAAGTPAIPIAGTTMIFTVLSGMGWTTEACLIGYALVVAINRPVEM ALLPLNVIGDAATNVIVNAKEKELNKEIYNS >gi|224461045|gb|GG657759.1| GENE 1295 1332924 - 1333685 841 253 aa, chain - ## HITS:1 COG:Cj1541 KEGG:ns NR:ns ## COG: Cj1541 COG1540 # Protein_GI_number: 15792849 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Campylobacter jejuni # 1 252 1 252 255 309 55.0 4e-84 MYSVDLNSDMGESFGAYRLGGDEEIIRYVTTANVACGWHAGDPMVMDQVVRLAKEQGAMV GAHPGYPDLMGFGRRKMALSFQEVKNYVKYQIGALSAFTQSNGMKLQHVAPHGAMGNQCQ YDEEISTAIVEAAAEFDKDLIIYYCAGAVLGQIAESRGLRAASEIFADRAYMDDLSLVPR KMEGSMITDEEVAIKRCVRMIKEGKVTSINGKELDIRGDTLCVHGDGPKALAFVRRIRET FADEGIEIRSLQR >gi|224461045|gb|GG657759.1| GENE 1296 1333732 - 1334691 1169 319 aa, chain - ## HITS:1 COG:CAC2945 KEGG:ns NR:ns ## COG: CAC2945 COG1052 # Protein_GI_number: 15896198 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 1 319 1 324 324 374 56.0 1e-103 MKIVVLDGYTLNPGDISWEGMEALGDVTVYDRTRAEEVAERIGDAEVVYTNKTPITRETL DKCGGIRFIGVLATGYNIVDIEAAKEKKIPVSNIPTYGTAAVSQFAIALLLELCHHIGEH SDAVKNGEWTSNPDWCFWKYPLVELAGKTMGVIGFGRIGQDTGKIAQALGMKVLAYDAYK KPELESDTCRYADLDTLLAESDVISLHCPLFPDTEGIINKDTISRMKTGVMIINDSRGPL IVEEDLRDALNSGKVAGAALDVVSTEPIRMDNPLLDAKNVILTPHIAWAPKESRQRLMNI AVENLRCFVAGAPQNVVNK >gi|224461045|gb|GG657759.1| GENE 1297 1334743 - 1335693 1023 316 aa, chain - ## HITS:1 COG:FN0436 KEGG:ns NR:ns ## COG: FN0436 COG1984 # Protein_GI_number: 19703774 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Fusobacterium nucleatum # 3 314 4 312 336 265 45.0 8e-71 MGIIVENPGILTTVQDEGRFGYQQFGVSPAGPMDTQSFYLANILAGNRRSEGLLEMTFSG PTLKFQKDNIIAVTGASMSPCVNGEPVPMYQAVLVRAGDTLSFGMTDGNGSRGYLAFAGG LDVPLVMGSKATLMRNNLGGIEGRKLEKGDAIGFASPKTELPNMPLRRLAPERFPTGELT LRVVAGPQDTDFSEEELKRFFWYSAKITNEFDRMGCRLEREEPLKHIGDGNIITDGIAFG SIQVPSNGQPIIMLADRQSTGGYSKIGTVISVDLPKLTQSVPGMRVRFVRVGIELAQNLF VRRLKSLERLEKQLGR >gi|224461045|gb|GG657759.1| GENE 1298 1335693 - 1336421 723 242 aa, chain - ## HITS:1 COG:FN0437 KEGG:ns NR:ns ## COG: FN0437 COG2049 # Protein_GI_number: 19703775 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Fusobacterium nucleatum # 4 234 19 250 262 163 34.0 3e-40 MEAKFLISGDSAVSVQMGSEISLEVNQLVRMLFLDLTNDPVEGIVEMVPTYASLMIHYRP EKIQYSRLKEEIEGRLGSMEQVEEGSRIVKEIPICYGGELGPDLEDCAAVENVSSKEFIR MHSEHEYYTYMLGFAPGHAYMARFEEPFHFKRRETPRVRIPGQSIVVQLNLSNLIPFDQP CGWNIVGATPLTICDHTKKDPFLVHAGEWVRYVPVGRREYEKIKEDVRRGTYRLKTYEKA VK >gi|224461045|gb|GG657759.1| GENE 1299 1336563 - 1337474 967 303 aa, chain - ## HITS:1 COG:L0220 KEGG:ns NR:ns ## COG: L0220 COG0583 # Protein_GI_number: 15672356 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 6 173 5 172 272 72 27.0 9e-13 MNLSEIETFLMIVKTKNITKTAENLFLSQPTVSHRLKSLEDELEVKLITRKKGYKQIELT AQGEEFIPIAERWVSIWQEMQRLKDSQEKLNLTVACTDTLNSAILFDLYRDMLDEEEMIM NLLIKTHYSYEVYGLLENHDIDLGFVYHHLHFKNIVAEPVLKEKMYLIQADETRLRKPVI HTDELDLGREIYVSWEANYQIWHDQWVSRGERPRIQVDTFELLFHLLSKEQMWAIAPVSV VERIRSLRPVYVSELGNQIQPPERITYKIKHKFPNEATLKAVQVFEDRLDGYLRQKGWDS AGQ >gi|224461045|gb|GG657759.1| GENE 1300 1337628 - 1338902 1232 424 aa, chain + ## HITS:1 COG:alr3867 KEGG:ns NR:ns ## COG: alr3867 COG0520 # Protein_GI_number: 17231359 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Nostoc sp. PCC 7120 # 85 420 96 462 464 92 23.0 1e-18 MNTEHGILFSDAYQKSLKEQFYHADEDPEHGTRLFFENSGGSLRLKKAVEVKCAVEQFPD CPERVRGRGLELQSYVKNGTKEILEVVFGALLTELSASQAMYQAVGAVMENVKWGTNAVT SSLEHPSAHDAVEYYCNKTGREFRVVPANKTTGGIDPDEVMKYVDKDTCLLSIMAASNIS GNIMDIKEITRRAREINPDIYVVSDAVQHAPHAVIDVEDWGVDIANFAPYKFFGIRGCGY AYVSDRVAVMPHHKLIHKEADVWSLGTPTPANFAAMMAVIDYVCSIGSHFCDAADRRALY VEGMNRIHLQERALLYRMLEGTKEVPGLRHIKNVEVYVDMEDLTYKDLIIAMGIRGIEYS ECVQKYLEHGVTVFERLRSSMYSKRIVEALGIEGAIRVSPLHCNSADDIDRFLKITAKIA ESVS >gi|224461045|gb|GG657759.1| GENE 1301 1338959 - 1340092 1226 377 aa, chain + ## HITS:1 COG:BS_yxaA KEGG:ns NR:ns ## COG: BS_yxaA COG1929 # Protein_GI_number: 16081056 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Bacillus subtilis # 1 366 1 372 382 301 49.0 2e-81 MKVVIAVDSFKGSLSSMEAGRAAKAGILAARPDASVIVKPLADGGEGTTDALVEGLNGKK IDITVTGPLGQPVSASYGYLEETSTAVIEMAAAAGITLVPPDEKDPLSASTYGVGEMISD ALVRGCRNFIIGIGGSATNDGGIGMLKALGYRFLDRDGKDAGEGAAALGRVMSVDTDGRN PLLSECCFQAACDVTNPLCGKNGATYIYGPQKGVTPDMLETLDAHMAHFAAVTFRTFGAD HSGAPGAGAAGGLGFALLSYLDASLTPGIDLILEAVDLESELAGADIVVTGEGCLDAQTA MGKAPAGVARLAKKYGIKVIAFAGSVTKEASACNQAGIDGFFPIVRGVTTLEEAMKPETA RDNMAAAAEQVFRIIDK >gi|224461045|gb|GG657759.1| GENE 1302 1340167 - 1340478 462 103 aa, chain - ## HITS:1 COG:alr0052 KEGG:ns NR:ns ## COG: alr0052 COG0526 # Protein_GI_number: 17227548 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Nostoc sp. PCC 7120 # 2 102 3 104 107 108 54.0 2e-24 MAAIHLTKDNFKQEVLESEVPVLVDFWAEWCGPCQMVLPIVEELAGEVKNAKICKVNVDE QMELAKEFRVMSIPTLMVFKDGQKVKSEVGAKSKEELKAMLEV >gi|224461045|gb|GG657759.1| GENE 1303 1340549 - 1342231 1636 560 aa, chain - ## HITS:1 COG:CAC3563 KEGG:ns NR:ns ## COG: CAC3563 COG0249 # Protein_GI_number: 15896798 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 57 547 89 570 577 231 30.0 4e-60 MDVYTAALIAGAAVSVIVIAVCSRYAARKRLRDFIRDQYGKKPEKRDLDLKLAGMYYAEA EHSDENGLVDDETWNDLDMEEVFWRINSACSFAGEQYLYAALRILSQDKERFAQYEQKIA FFEAEQEERAEIQYELHKIGKRPSFYYVPSFFNNADAFGMRHVWSYRIMQAVFLVSLLLC LILRTEWIFAAAGVVFLVNLAVYGTMKGKYDTQLEVIEGIYGLMRAAQKITDSRQGRFAQ VSPELFRVAGELKHSEKKFVYLLGRKRTSASGDFMEMAAAYITGAFLLDFTVYNKIIREI CAKMDTFIWLYELIGELDMLLCVASFRKSLPVFCVPGFHRELSVEMEDIYHPLIGHPVYN SVRLNKNTIITGSNASGKSTFIKAVAVNEILAQTIHTCTARSFMLPATYVKSSMAVKDNL MGGESYYIREIKSLKRTAFSVDGRLPVFCAIDEILRGTNTDERLAASAAILSYLQDKNCI VLVATHDLELLEMLRGSSYDYYYFSEQPEAEDVIFDYKIHREVNKNTNAIRLLEQIGFPE EVIGCANRFYEEIIVTKSQK >gi|224461045|gb|GG657759.1| GENE 1304 1342312 - 1343700 1307 462 aa, chain - ## HITS:1 COG:SPy1082 KEGG:ns NR:ns ## COG: SPy1082 COG0642 # Protein_GI_number: 15675070 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 59 453 54 441 448 86 25.0 8e-17 MEIKRKKKIYTVFLTYLGAFLAQSALLAAAAYIALNIMINTGFLQPAVYTLNRLEEGAKD IETAGRVGESMIPDGAAYGVYDEAGNYLYGNFEKKEQGTAWNCKENGETQKAFKTFYKFI EREDKETCIVRYDILAQFADPSLRKHLPNAEWLFCAVILALFLLQTAWTARKFGKYLSGR IRTLNEVTDRIRENNLEFDREYSDVREIDDVLGSLFTMKEALKTSLEEQWKSEELKKEQI SALAHDIKTPLTVIRGNAELIHETARDGDVREYNRYVTESVKEIEDYLIILQDTLRTGNS GREEEKVLKAEAFLRQIVKKAEHLGKGKKIQVKASIHTEGADIRVQEEKLYRAFMNILSN AAEYTPKGGVITIEAAVKTGAGQAYVETIVCDSGPGFTGKELKAASEQFFQGDMSRHKKG HYGIGLYIADRFIRQQGGVMETGNCKVTGGARIKVRLPLWRR >gi|224461045|gb|GG657759.1| GENE 1305 1343691 - 1344353 533 220 aa, chain - ## HITS:1 COG:BH1944 KEGG:ns NR:ns ## COG: BH1944 COG0745 # Protein_GI_number: 15614507 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 5 220 7 226 229 154 38.0 1e-37 MGERILAVDDERNILMLIRNALEKDGYMVDTVAVPEEVLHLDLSPYSLILLDVMMPGLDG YALCEEIRSGTDCPILFLTAKTGEGDITKGLGLGADDYITKPFGIGELRARVQAHLRRES RKRRHLMTVGDMQFLPGEKKALCGGQEIPFTKSEYAICEYLALHQGQVFSKERIYEHIFG YEKESDSTAITEHIKNIRAKCQPAGISPIETVWGIGYRWK >gi|224461045|gb|GG657759.1| GENE 1306 1344353 - 1345114 697 253 aa, chain - ## HITS:1 COG:no KEGG:BAS3614 NR:ns ## KEGG: BAS3614 # Name: not_defined # Def: bacteriocin ABC transporter permease subunit # Organism: B.anthracis_Sterne # Pathway: ABC transporters [PATH:bat02010] # 1 250 9 258 260 167 36.0 4e-40 MRELTRLIQGEFIKMRHTKLLWMHIFVPAAGAAVFLLYYGYAPWSAEGKVQGYMESVAVA YPFLAGLVCAMSVELEEEGHMQTFLLSGRRKYRLFLGKWLALGLCSLAASAIAFPGFAAG YEFILRQNPYPAHFYILGWLALWGGQMVVYAFHLFLSLCFGKAASMAAGIVEAVLAALML TGLGDGCWPVVPCAWSGRWSSYLLLYEAGDRGRWSAAARSLPAQMAVCAAAAVLITAGIF IWFHYYEGRQCEE >gi|224461045|gb|GG657759.1| GENE 1307 1345111 - 1345893 737 260 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_1430 NR:ns ## KEGG: NT01CX_1430 # Name: not_defined # Def: antibiotic permease protein SpaE/MutE # Organism: C.novyi # Pathway: ABC transporters [PATH:cno02010] # 8 255 4 246 249 167 33.0 3e-40 MSAFFRTYYAAEQLKCRHTLFSKLCYIMPALTVAAAFLLTGSYGAIDGYNWWYTSLLPGM LTIVCCMTGQADTKLEGRALTVLPVDLRRVWDAKVLVCIKAAVLGNLVLFAFVSAAQILT ESVADMEMLAEVTLRQGALAALVMIGGCIWQIPLCLWANEKFGLYPALFANLALNVAGTV TGPLGERWYINPYSVTARAMCPLIKVLPNGLVAAEGNVTYSPELMDMKAVPIGMCVCLFW LVILWTASRMWYGKKGGETV >gi|224461045|gb|GG657759.1| GENE 1308 1345895 - 1346602 253 235 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 6 207 5 214 311 102 32 1e-19 MERLLLETRDLCKSFKGHPAVSHVSLQVPEGCVYGLLGPNGAGKSTILKMLTGMMRPDSG EILFGGKAWSRENLRDMGALIETPPLYGNLSARENLLVRTKILGLSEERIEEVLFSVDLK DTGRKKARHFSLGMKQRLGIAAALIDSPRLLVLDEPANGLDPYGIQQLREMIRSFAQQGI TVILSSHILSEVEQTADYIGILADGVLGFQGGMPKRGRLEETFMKTVGRGRKEAW >gi|224461045|gb|GG657759.1| GENE 1309 1346714 - 1348576 1963 620 aa, chain - ## HITS:1 COG:no KEGG:Msm_0823 NR:ns ## KEGG: Msm_0823 # Name: not_defined # Def: phosphoenolpyruvate synthase/pyruvate phosphate dikinase, PpsA # Organism: M.smithii # Pathway: not_defined # 8 618 276 886 889 577 47.0 1e-163 MNWEEIRNRESLTAKESKYICNELMTTDIRMERLIVEHFTPEDYVRVKERSIGGGRIGGK ACGLLLARKLIEVKTPQYVEHIAPHDSFFVGSDVFYQYLVDNDCMELRRRHMEEKEKFKE ADELRGRISGGTFSQEVQEELRKVVRHYGDTPIIVRSSSFLEDGFGNAFSGKYESTFCMN QGSETERLKELTDAIRSVYASTMNPSAIEYRRRRKLLDTDEQMALLIQKVEGQKYDGFYM PVAAGMGCSYNPYKWMENMNPDAGMLRMVMGLGTRAVERTPGDYPRLVCLDRAQANLRTT VAERHKYSQRKVDVMDHETGTLGTRRLEEVIEALPGWQKKLVLSHDTDAEDMLAQRGVYK KVYFADCQGMVNNDGFIGLMKHILEMLEAEYGRPVDVEFAVNSFAKDEWKVNLLQCRPLQ ASVSEEIHIPEDKAEEFLFDVRRTSMRRSKTEKLDLIVWVDPRKYYEYPYAKKFSVARRI DEINQHFEEAEKKMLLLVPGRIGTSSPELGVPVVYANISEFCAICEVAYSEVGYHPELSY GSHMFQDLVEADVYYGAINDNSKTRCYQPGLLTQHRDIFQELWPNDSELNEIIKLYDVSD CHAELMLDAKQGRAVCRLGK >gi|224461045|gb|GG657759.1| GENE 1310 1348738 - 1350000 1110 420 aa, chain + ## HITS:1 COG:ML2336 KEGG:ns NR:ns ## COG: ML2336 COG1167 # Protein_GI_number: 15828259 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Mycobacterium leprae # 15 417 56 457 463 390 48.0 1e-108 MNDTKKPNTSLQELKDQYEAARGKHLKLNMSRGKPSPGQLDLSNELLGPLDSFLTEDGTD ARNYGILDGIPECRTLFADLLGLDRDRMIIGGNSSLSLMFDTVAALCLFGTGGNRPWQHY KYAGTPVKFLCPSPGYDRHFRICEELGIEMIPVPLSSEGPDMDLVTDLVRQDPLIKGMWC VPLHSNPEGVCYSDRVVEQLASMETAARDFRIFWDNAYGIHHIYEEVTLMNILDACEKHG HPERAYYFFSTSKITFPGAGVALIASGPDNIRELKGHMSAQIISYDKLNQLRHVKYFKTP DNIRAHMARLADELRPKFDLVLSKLEAELRGTGLASWSHPKGGYFISLNTLPGCAKRTVE LAREAGVVLTDAGATYPYGRDENDSNIRIAPSYPSLGELDAAMDIFILCIKIAALETNKK >gi|224461045|gb|GG657759.1| GENE 1311 1350029 - 1351291 1419 420 aa, chain + ## HITS:1 COG:TM1015 KEGG:ns NR:ns ## COG: TM1015 COG0334 # Protein_GI_number: 15643773 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Thermotoga maritima # 8 420 7 416 416 441 54.0 1e-123 MNNTYNPYDNVLKVVSEAANILGYTDSDIEALKYPERELKVAIPVRMDDGSTKVFEGYRI QHSTSRGPAKGGIRFHPDVNLDEVKALAAWMTFKCAVVNIPYGGGKGGVVCDPNKLSEDE IRAITRRFTAAIAPLIGPEQDIPAPDVGTNAAVMGWMMDTYSMLKGHCVHGVVTGKPIEL GGALGRSEATGRGVMFTTKNVLKKLGIDPENTTVAIQGMGNVGSITAKLLHREGMKVVAV SDVSGGIYKESGLNIPEILDYLSQNRKNLLSGYEEDGMTRISNAELLELDVKVLIPAALE NQINAANAERIRADIIVEAANGPTASEADDILAGKGVLVVPDILANAGGVVVSYFEWVQN IQSVSWTEETVNEKLKNIMDPAFEAVWDISRKNNGTLRTGAYLIAVKRVVEAKKARAIWP >gi|224461045|gb|GG657759.1| GENE 1312 1351411 - 1352370 982 319 aa, chain + ## HITS:1 COG:FN0603 KEGG:ns NR:ns ## COG: FN0603 COG0583 # Protein_GI_number: 19703938 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 306 1 306 314 216 35.0 4e-56 MFNSMNYIYEVYKERSFSKAAANLYISQPSLSAAVKKVEEKIGAPIFDRSVSPIKLTECG RHYIKAVEEIMDIQNQFENYMTNINELKTGQIAIGGSNLFASYILPPIITRFTKKYPLVK VHLIEANTPQLIDQLFHGALDLVIDNSSFPDTIYQHHLYTKETLLLAVPRSFPSNQEASS FQLTIEDILADRHLIEDTPCVPLSLFEHEPFVFLRSGNDTRSRADKICQSQSFLPNIVLK LDQQVTAFNVCCYGMGVTFVSDSLLKHMPDKRDCYYYKVDDSHTGRSICFYHKQTKYVTR AMEEFLKTAREQSMGETQL >gi|224461045|gb|GG657759.1| GENE 1313 1352509 - 1354545 1784 678 aa, chain + ## HITS:1 COG:RSp1178 KEGG:ns NR:ns ## COG: RSp1178 COG0642 # Protein_GI_number: 17549399 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 258 664 266 654 676 192 32.0 2e-48 MENKNMSENKTEKAGQTSSYDHDTQYFQMMMEEYDGNIYISDIETYDLLYLNQTACRSLD RHLEEIIGCKCYKVIQGRNDPCPFCTNDKLREDEYYEWEFYNPVLERTFMIKDRLINWNG RMARMELSHDMYTSKFKLEKKSREQDALLRSVPGGFARLDARDCSTVLWYGADFLGMIGY TAKQFEQELDSQCSYLHPDDLQRIIPILHELETSGGSAVTEAQVITRSGETKILTITLSY ASGEESWDGIPSFYTIGIDITKERMEQERQRKMLEDAYKTARIASEAKTNFLSSMSHDIR TPMNAIMGMTAIAEANLYTPDKLKDCLSKINASAQHLLGLINEVLDMSKIESGKIDLTFG TVSLPELFQNISDMCRPLAQEKNQKLQLSVDDVCHKTVITDGGRLQQVLMNLLTNAIKYT PEGGAISLHVREIPSDAVYKGQYEFIVTDNGIGMTAEYIPHIFEPFSRAEDTRINKIQGT GLGLAITQNIVNMMNGTIEVQSEPENGSRFIVAVPLDLYREDMTTSAQLKSQSVTPDEEA ARLVEEEPPSSLSGRRILLVEDNDLNREIASELLEMHGCSIEAAENGKLAVEKFARSAPE EYDCILMDIQMPVMDGYEAARAIRALKRDDARTVPILALTANAFATDLAKAHNAGMNDHI AKPIDVERLLETLNRWMV >gi|224461045|gb|GG657759.1| GENE 1314 1354629 - 1356419 1766 596 aa, chain - ## HITS:1 COG:lin2898 KEGG:ns NR:ns ## COG: lin2898 COG2936 # Protein_GI_number: 16801958 # Func_class: R General function prediction only # Function: Predicted acyl esterases # Organism: Listeria innocua # 40 586 9 554 555 144 26.0 6e-34 MENKEKLEIVGLDEKPKYWDERYMDGIEKMTPRMYDVLKEEDVRMQVRDGVTLAVDIYRP DTEEDIKFPGLVAFSAYGKSIQTMDRISMQFKTVLFDHTIEAGDIYEYVKHGYIVVVPDP RGIGKSEGAWDGLYGRQEQEDCYDVIEWTAALPYCNGNIGMIGISYFSILQPVVAALQPP HLKAIMMVEVVDNMYHHNYPGGVFVNRSFMYTDFCPDVNSMSTAERTYTTEELKARIEKR LSDPDINHSALYSGILNCWPPRNQTYFFDMLLHDDDSDFWRERSIESHPEDIKVPMYLIS EYYELGRFSQGPFFLFTHGDMSVPRKLAAPEEHDALHLPHRIMTPEYLRWYDYWLKGIDT GVMDEPPMKLLVRGINKFRYEYEWPLARTQWTKYYLRDGGLLSTEKEKDEHVKPTVLNHK SPYEGGSNETYAVPNVVFRTPVLEEDVEVTGPIVMHLMCAIDKTDANFTVMLNDVPPEGE GRPLNLVTGNLRASHRGLEKKELKPWELNNDHTRKVPVVPGEINEYTIEIMNTSNVFRKG HRIEVEVKNYDANPYHWMVQLPNSQDIEYKIFVDSVHNSYINLPVIPYSDEEQWIR >gi|224461045|gb|GG657759.1| GENE 1315 1356434 - 1358170 1415 578 aa, chain - ## HITS:1 COG:lin2898 KEGG:ns NR:ns ## COG: lin2898 COG2936 # Protein_GI_number: 16801958 # Func_class: R General function prediction only # Function: Predicted acyl esterases # Organism: Listeria innocua # 12 527 5 519 555 109 25.0 1e-23 MNSQIIREPEYEIRVEKDRPIVMKDDIRLYCDVYRPDDKEKHPVLVGFSPFGKAAQEAGR RRDPIQLGKFMYEQGIEVGGIDFFASRGYTVVVVNPRGIQNSEGIWTGVLSRQDQIDCCE VIRWAGHYLSDGNVGMIGCGYAGKIQPLVASMNPPYLKAVMPVDVIDDMYLDCYPGGILS DINYPLCSYIPHTNTISEAEMENSPEDLKEMLAKARRQPEIATNSYYYRGLDSFPPRHYT WNIDIMLHPYSGEWWDRRSFKDRKVTIPSYIVGLYYEYGHTTISAYDIYNKIDDNVPKKL LMIDPASAKTSPYEKPVAEQLRWYDHWLKGMDTGIMDEPPMKFLVMGENRYRYDTQWPCA DTEYKKMYFRKESRLTEEKETGTAAPDQIRHIPPTRLSQMPEDVPALTYTSAPLKEEVEI CGPVTGCIQAAIDTDDAHLAMKLWDKDAETGYRTLLSCGYLKCSHRELDPSGTEHRPKHA HTKDEPVEAGKVYEYIFELAPVDNLFKKGHQIEVEFKTMDQQYFDFNEMASLPRLYTSGR VAGPHPLAREVNFDIHVDSEAASWIELPIVNGEKNWVE >gi|224461045|gb|GG657759.1| GENE 1316 1358264 - 1359538 1269 424 aa, chain - ## HITS:1 COG:DRA0338 KEGG:ns NR:ns ## COG: DRA0338 COG3844 # Protein_GI_number: 15807997 # Func_class: E Amino acid transport and metabolism # Function: Kynureninase # Organism: Deinococcus radiodurans # 13 422 68 455 462 187 30.0 4e-47 MADIMSREYASCLDEKDKLSRYKEEFYLPDHLYYEANGLGPMSRRSEKTLKRVADEWKNQ LVAGWFCGEIPWFYYPERIAAMEEGIVGAQERELIINGTTTTNIHSVLAAFYRPEGKRTK LLCDSQIFSSDRYAVEAQIRLKGLDPEEALVLAGGDGPILDEEDLIAHMTEETALAFFPS VVHSTGQLLDMERLAGEAERRGIPVGFDLSHSAGVVPHKLHEWGVDFAVWCNYKYLNGGL GCPATIFIHEKNFDLPVAMPGWHGYVKSRQFQKLPYFEAETGAGGWQHGSPLILNMAPLE GALDMVNEAGIGAIREKSLAMTGYFMELLDAMPSDCGISILTPREEARRGGHVTILHAAA PDITEFLDSGSRMTDKLRAAVKEKRDSGTAASSDDQVRIAFSPLFSSFEDVRQTAENLYG LLKN >gi|224461045|gb|GG657759.1| GENE 1317 1359578 - 1360954 1977 458 aa, chain - ## HITS:1 COG:AF1612_1 KEGG:ns NR:ns ## COG: AF1612_1 COG0531 # Protein_GI_number: 11499204 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Archaeoglobus fulgidus # 20 382 7 383 445 100 25.0 8e-21 MGNSNEATANVTEEYTTKKLRRVLGKKELISMGLGQIIGSGVFSLTGVAIGFTGRSVVFA FLFGALFSLAVTIPSIFAGSAVRLRGGQYTMASLLLGERFSGFYIIIYIVGNISIGMYAL SLADYLLALVPGIPRVPLAVAALTLFFVINLFGVKDAAFIQNILVIILAAALAVFAAVGV FNVEPGYFTNVEPPLFMGGWKGFCMAAIFTSFATTGGGNLVNFSGECKNPTKDVPFAIVL STLIVTALYAVIGFVAAGVLPVEEVMYQPLSVAAGAFLPKALYVFFVTGGALLALSTTLN ATFGWVTKPVLQACVDGWFPKKLGKINDKYGTPHYLLILFYIVGLIPVVAGLDIDRIANM SMILMNITTFLVVVATARLPKLLPEAWAKSTFKISDGVLKVVCYLCGALLIFQNYLLIED NTPEIIIGNIILLVLTFIFMVVRYKSGKVKVEVSWEEE >gi|224461045|gb|GG657759.1| GENE 1318 1360986 - 1361696 921 236 aa, chain - ## HITS:1 COG:PAE0036 KEGG:ns NR:ns ## COG: PAE0036 COG1878 # Protein_GI_number: 18311668 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pyrobaculum aerophilum # 3 236 2 212 223 100 30.0 3e-21 MRFIDLTREINNDTQVCPCDKVPVVEDYATTEEEGVNVKFMKMGTHTSTHIDAPYHISKD GKNLNDFPVERFVGKGIVLDFSDKGEIYEITREDIMARAEELKKVDFAILNTGWAQYYGT WDFFRHPYLSGDAALALVELGIKIVGTDGSSADAAYGFSTAKRLENPTFSEILENIEREN IKNEAHAALLGNECLIVEYLCNLDELPKEAATYSFLPLKLIEADGSPVRAVCVAEG >gi|224461045|gb|GG657759.1| GENE 1319 1361712 - 1362650 926 312 aa, chain - ## HITS:1 COG:all0345_2 KEGG:ns NR:ns ## COG: all0345_2 COG4978 # Protein_GI_number: 17227841 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator, effector-binding domain/component # Organism: Nostoc sp. PCC 7120 # 151 305 1 154 155 80 30.0 3e-15 MQNSIDFTLGEIFYNVSIQFKHMIQALGGEDMFRIGQLASIYRISGKTLRYYDELGLLRP KYVDEATGYRYYTSSQIPVLNEIFLLKEMGLSLKEITYLMKEEVDKDHTLLKGVLELKQL EFDRQIQELNEKKQTIELLKKKLDKEGGIELSSFKVGIKKVEEMQVASLKASISTYSTQD ALWAELLEYLNKCRAKVGNERYTIYYDSVYKSDEIQVEILKRVLAPFPETERIRHKRQEG YEEVAYLLHTGEHESVIDSYEAILTWIEENGYKVVGNIREEFHMDDFTTDDPKEFVTEIQ IPVQKRGEEFVR >gi|224461045|gb|GG657759.1| GENE 1320 1362994 - 1363476 429 160 aa, chain + ## HITS:1 COG:BS_ylaC KEGG:ns NR:ns ## COG: BS_ylaC COG1595 # Protein_GI_number: 16078537 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 6 158 8 165 173 77 31.0 1e-14 MDIDFEEIYNRYFKDVYLFILTLSKNPELAEEITQETFFKALKEIRHFRGGCSIKSWLCQ IAKNIYFSHMRRQKFTADRDVPLPASSADVEQSYLNKEKARSIYQILHTLEEPYKEVFLL RTLGELSYREIGDIFSHNESWARVTYHRAKLKIREQLTAE >gi|224461045|gb|GG657759.1| GENE 1321 1363492 - 1364310 691 272 aa, chain + ## HITS:1 COG:no KEGG:GYMC10_6178 NR:ns ## KEGG: GYMC10_6178 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 1 250 1 234 234 75 27.0 3e-12 MGNIPCDLIKDLLPLYTDDVCSEQTKHTVEEHLATCERCREIYEDMQEKLPGEKEIGLDA ELKDDIAFIRSVKRQLTRRQLTLIFILIPVFVVILILTPTVLSELSTVRADDIKVTELYE LSNGDIYCTIKSKKAISTLSAGNLMSGEKDTKGREYCDGVITAGFPSAFTTLLDMQKDRF PVLIRSQSFIFTTDKIVEYGGATIGGKDTDSHCRSIKYKGRHKEELVIWKEGQKLEPAPE QIEKMLKESEVPDPAVTVSTEQLKIGDVLVIY >gi|224461045|gb|GG657759.1| GENE 1322 1364408 - 1365427 961 339 aa, chain - ## HITS:1 COG:FN1791_1 KEGG:ns NR:ns ## COG: FN1791_1 COG0494 # Protein_GI_number: 19705096 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 4 151 2 148 158 160 50.0 3e-39 MTSLSTLCYIEREGKYLMLHRTVKKNDVNQDKWIGVGGHFEADESPEECLLREVREETGY TLTSYRYRGIVTFVSGNGVTEYMSLFTADGFKGEPIPCDEGELAWVGIEDVWKLNIWEGD KIFFRLMDEQKEFFSLKLVYDGHDKLVSASLNGEPMELFDVRNPDGSPSGIVRERGVAHR EGSLHATVHIWVVRENDKSGFDVLLQKRSASKDSHPGFYDISSAGHIAAGEDYLPSAVRE LSEELGISASESELQYVGIHRGGFEDVFYGRPFKDEELSAVYVYAEPVRAGELRLQESEV EEVVWIDYEECRKRMEDGTLKNCVYADEFEMVGTYLGVL >gi|224461045|gb|GG657759.1| GENE 1323 1365424 - 1366299 1161 291 aa, chain - ## HITS:1 COG:lin2625 KEGG:ns NR:ns ## COG: lin2625 COG0682 # Protein_GI_number: 16801687 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Listeria innocua # 21 282 13 260 277 170 41.0 4e-42 MHRTIDFPNIGIHLKSVGDHITVFGFDIAFYGMIIGLGILAGIFIAAAEAKRSGQNPDDY FDLAIYAVIFSIIGARIYYVAFSWDMYKDNLLSIFNTRQGGLAIYGGVIAAVITVFIYAR IKKLSAALIFDTAGLGLVAGQMIGRWGNFFNREAFGEYTDNLLAMRLPVDAVRGSDITEL MRSHMENTGGVSYIQVHPTFLYESLWCLMVLIIMLIYRKYKKFDGEVFLVYLLGYGIGRA WIEGLRTDQLLIPGAGWPVSQVLAGIIAVVSLGLIIYKRRKIKQKAEREQE >gi|224461045|gb|GG657759.1| GENE 1324 1366320 - 1367420 1485 366 aa, chain - ## HITS:1 COG:CAC2134 KEGG:ns NR:ns ## COG: CAC2134 COG0012 # Protein_GI_number: 15895403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Clostridium acetobutylicum # 1 366 1 365 365 468 66.0 1e-132 MKLGIVGLPNVGKSTLFNSLTKAGAESANYPFCTIDPNVGVVTVPDERLNVLGEMYHTKK IIPAAIEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHVVRCFEDGNIVHVDGSIDPL RDIETINLELIFSDLEILERRISKTAKVARNDKTAAKELALLEKIKAHLEENRLAKTFDK TEDEEEEEWLKSYNLLTYKPVIYAANVAEDDLADDGAENAGVQAVREYASKEASEVFVVC AQIEQEIAELDDEEKKMFLEELGLEESGLEKLIKASYRLLGLISYLTAGEPEVRAWTITE GTKAPQAAGKIHTDFERGFIRAEVVSYDDLMECGSHGAAKEKGLVRLEGKEYVVKDGDIM LFRFNV >gi|224461045|gb|GG657759.1| GENE 1325 1367480 - 1368145 1003 221 aa, chain - ## HITS:1 COG:CAC1731 KEGG:ns NR:ns ## COG: CAC1731 COG1564 # Protein_GI_number: 15895008 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Clostridium acetobutylicum # 4 217 2 211 211 132 35.0 5e-31 MSKKIVIVSGGELDEQLALSYLDEKGGSYVIGVDKGMEFLYSHHITPDYIVGDFDSTDPE IAAYYRTQTNVPVREFNPVKDASDTEIAVRLAMTLGGKELIILGATGGRIDHLWANVQTL TVPFKAGVDAYIIDTQNRIRLIGEETHLKKEDAYGPYFSVFPLGETVYGFNITGAKYPLK DHTLTPYDSLCVSNQIEADEVVIEFGGGMVILMETRDSKGV >gi|224461045|gb|GG657759.1| GENE 1326 1368138 - 1368800 794 220 aa, chain - ## HITS:1 COG:sll0807 KEGG:ns NR:ns ## COG: sll0807 COG0036 # Protein_GI_number: 16330729 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Synechocystis # 4 203 6 207 230 202 51.0 3e-52 MEYILAPSILAADFTVLGEEMKRTAENGAKYLHFDVMDGMFVPSISFGMPVLRSIHNVTD QVMDAHLMVQDPIRYVEDFKDAGADIVTVHLEACEDVGAALDKIRECGMKAGLSVCPETD ASAVERYLKDIDMLLVMSVHPGFGGQKFIPESLDKIRTIRRMASEQGLGLDIQVDGGIYL SNVREVLDAGANIIVAGSAVFNGDPGRNTSEFMEILKSYE >gi|224461045|gb|GG657759.1| GENE 1327 1368804 - 1369682 881 292 aa, chain - ## HITS:1 COG:CAC1729 KEGG:ns NR:ns ## COG: CAC1729 COG1162 # Protein_GI_number: 15895006 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 1 292 1 287 288 256 46.0 3e-68 MKGKIIKGIAGFYYVHVVESGVYECKAKGVFRKEKIKPLVGDDVEIEVLSESGREGNIEK ILPRRNELIRPAVANIDQALVVFAIARPSPHFNLLDRFLVMMESKGIPVILCFNKEDIAT DPQVKELKEIYADCGYPLLFTSARLGQNIDKVREVLKGRTTAVAGPSGVGKSSLINILQP EANMETGAISTKIERGKHTTRHTELFPVGEDAYIMDTPGFSSLYVNDFEKEELKQYFPEF APFEGTCRFHGCDHIHEPGCGVKEAFDKGLIHSVRYKNYVDMYEELKKKRRY >gi|224461045|gb|GG657759.1| GENE 1328 1369714 - 1371825 2321 703 aa, chain - ## HITS:1 COG:BH2504_1 KEGG:ns NR:ns ## COG: BH2504_1 COG0515 # Protein_GI_number: 15615067 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Bacillus halodurans # 5 314 3 307 343 281 48.0 3e-75 MVKDGIYLGKRYEVLSKIGAGGMADVYKGKDHMLNRYVAIKVLKKEYKEDDNFVRKFRSE AQAAAGLMNPNIVNVYDVGEDRGLYYMVMELVEGITLKDYIEKKGRLSHKEVISIAIQMC TGIGAAHNANIIHRDIKPQNIIISRDGKVKVTDFGIAKATTSNTISSNAMGSVHYTSPEQ ARGGFSDAKSDVYSIGITLFEMATGEVPFDGESTVAVAIKHLQEEITPPSELVPDIPYSL EQIILKCTQKNAERRYASTTELIQDLKRSLVDPDGDFVVIPPLRNADTVIITDEELDDIR SSYDEEELDEDDYEYDEDEYDDDEYGGDEYDDDEYGDGEYDDDDDEYGGKDGKRGRRGKN SDEVNPRMNKIMKILTIVVVVIIVFILIFTIGKAAGIFKFGPKMNTEETDTGKVKVPDVV GMTEDDAKAALKKKGLGMKVVARKESKKYEKGTVSEQKTEAGKKVKKNSTVEVVVSSDLV GDEITVPDVSGMSEADAQKALEDEGLKVGSSEFVYDDNVAEGDVIGTTPSANAKVTKDTE IIMKVSKGSEKKTVPDIRGMSESAARTALSDAGLNVGTVTYDYNDSVEKGNVVSQSLNGG KKVSKGTSVDFAVSSGKKPEEKISVPGVTGVSESNARQLISNAGLSVGTVTYQSNNSVGA GLVVSCDPGVGSSVSKGTKINLVISTGAQQQPPVENPDDSDSQ >gi|224461045|gb|GG657759.1| GENE 1329 1371819 - 1372562 923 247 aa, chain - ## HITS:1 COG:lin1935 KEGG:ns NR:ns ## COG: lin1935 COG0631 # Protein_GI_number: 16801001 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Listeria innocua # 7 238 7 241 252 174 45.0 2e-43 MKIYAMTDVGRKREVNQDYVYVTDKPIGPFPNLLAVADGMGGHKAGDFASKYTVTVLRKE LEQTSVGRPEEILRGVVATANNMLIEAAAADVKLEGMGTTLVAATVVGNTLYFANVGDSR LYLINDKIRQLSKDHSLVEEMVRLGGIKEEEAKNHPDKNIITRAIGVKPDVEADVYEYRL KKGDTILMCTDGLSNMVEDEDMFDIVKGARDIVEAVQMLIEKANSNGGRDNIGVVMAEPL SDEVSTW >gi|224461045|gb|GG657759.1| GENE 1330 1372540 - 1373550 995 336 aa, chain - ## HITS:1 COG:CAC1726 KEGG:ns NR:ns ## COG: CAC1726 COG0820 # Protein_GI_number: 15895003 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Clostridium acetobutylicum # 2 328 20 345 345 349 52.0 4e-96 MGEKSFRSRQIYEWLHVRLADSFDEMTNLSKKLREQLSAEYEIREVTLTERQISSVDPTE KFLFRLCEGNMVESVLMRYSYGNSVCISSQAGCRMGCRFCASTLDGLMRNLTPSEMLRQI YQIQKLIGERISNVVVMGTGEPLDNYDNFLQFIRMVSDEHGLNISQRNITASTCGIVPNM RRLAEEDLQITLALSLHGSTQEKRKALMPVANKYELAEVLEACDYYFEKTGRRITFEYSL VQGVNDQPEDVRELTALLKRRNCHLNLIPVNPIKERNFVRPDSKNAHEFKNKLEKNGINV TIRRERGSDIDGACGQLRRRYTAVTEGESDEDICDD >gi|224461045|gb|GG657759.1| GENE 1331 1373603 - 1374907 1340 434 aa, chain - ## HITS:1 COG:SA1060 KEGG:ns NR:ns ## COG: SA1060 COG0144 # Protein_GI_number: 15926800 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Staphylococcus aureus N315 # 6 433 30 461 461 254 34.0 2e-67 MASSVNERELILDTLLQITREGEYCHIALRNVLEKYQYLDKKQRAFITRVINGTLEHLIE IDYIINQFSKVKVNRMKPVIGAIIRSGVYQLKYMDSVPDSAVCNEAVKLAEKRGFASLKA FVNGVLRNISRNMNKIAYPKDYIEHLSVRYSLPKWILEQWLERYGEDNVLVMAEDFLKEK PVTIRFNPDRISREALTEMLKEEGVRTEEIPEFPAALHIYGYNYLGGLESFRRGYYYVQD INSMRTVHWAAPRKGDTVIDVCAAPGGKALHMAERLHGTGHVEARDLTGYKVRLIEENIE RSGLKNIEAVKWDATVPDRSAAESADIVIADLPCSGLGVIGKKPDLKYKMTEEMQKELAA LQRKILSVVQAYVKPGGKLVYSTCTVSWEENEGNARWFKNTYPGFSLVREKQMIPGLDEG DGFYIALFQKENHD >gi|224461045|gb|GG657759.1| GENE 1332 1374930 - 1375637 771 235 aa, chain - ## HITS:1 COG:TM1511 KEGG:ns NR:ns ## COG: TM1511 COG2738 # Protein_GI_number: 15644259 # Func_class: R General function prediction only # Function: Predicted Zn-dependent protease # Organism: Thermotoga maritima # 8 230 5 224 230 212 50.0 4e-55 MIYPMMYFDPTYFLVLIGVIICLLASAKMNATFNKYSRVRSHTGMTGKDAAEHVLRGAGI YDVKVEHVQGNLTDHYDPRSKVLRLSDATYNSTSVAAIGVAAHECGHAMQHAQGYAPLSL RGALVPVANFGSAIAWPLILIGLLFNSSSSALLLNLGIIAFSLAVLFQIITLPVEFNASS RAVKMLGSTGLLYESEIADTKKVLTAAALTYVAGAASAILQLLRILLLTGGRRND >gi|224461045|gb|GG657759.1| GENE 1333 1375723 - 1376637 1135 304 aa, chain - ## HITS:1 COG:CAC1723 KEGG:ns NR:ns ## COG: CAC1723 COG0223 # Protein_GI_number: 15895000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Clostridium acetobutylicum # 1 300 7 306 310 304 51.0 2e-82 MGTPDFSVGTFEALIEAGHEIVLAVTQPDKPKGRGGKMQYSPVKETALKYGIPVFQPKKV RQAECIEELRRYGADIMVVIAFGQILPKEILEMTPYGCVNVHASLLPKYRGAAPIQWAVI NGEDVSGVTTMQMDEGLDTGDMILKKEVVLDEKETGGSLFDKLSAAGAVLCVETLKALEE GSASFEKQGETTTEYARMLDKDMGSIDWKKDAQTIERLIRGLNPWPSAYTRWDDKVMKIW EADVVAQNTQTLPGTVVSVEKDGFCVQTGDGLLKVRSLQIPGKKRMEAGAFLRGYKIEKG CELG >gi|224461045|gb|GG657759.1| GENE 1334 1376654 - 1377127 843 157 aa, chain - ## HITS:1 COG:CAC1722 KEGG:ns NR:ns ## COG: CAC1722 COG0242 # Protein_GI_number: 15894999 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Clostridium acetobutylicum # 1 142 1 142 150 159 57.0 2e-39 MATRKIRELGEEVLTKTCKPVDKLTLRTKVLINDMFDTMYEAYGVGLAAPQVGVLKRIVT IDVGEGPIVLINPEIIETSGEQTGEEGCLSVPGKYGIVTRPDYVRVRALDEDMQERELEG TGLLARAFCHEIDHLDGNMYVELTEDGLHDVGAGEEE >gi|224461045|gb|GG657759.1| GENE 1335 1377142 - 1379370 2157 742 aa, chain - ## HITS:1 COG:BS_priA KEGG:ns NR:ns ## COG: BS_priA COG1198 # Protein_GI_number: 16078634 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus subtilis # 2 738 3 801 805 564 39.0 1e-160 MFADIIIDITHEKLDRVFCYRVPEQLAGALEVGTEVIVPFGRGNRETRGYVVGFSEKTDY ELSRVKEIIRAADESVAIESRLVALAAWMHEQYGGTMIQALKTVLPIKRKEQPREKRRVR LLLDEEEGKKQLDVYLHKNQKARARLLAGLLDQPEQEYELVTKKLNITMPVIRALEEQGV LALDSEREFRNPVRQRVKQRQEVEYTKEQRNVIDTFWGDYREGIRGTYLLYGVTGSGKTE VYMEMIHRVVQEGKQAIVLIPEIALTYQTVMRFYGRFGDRVSILNSRLSQGERYDQMERV RSGAVDVMIGPRSALFTPFSDLGLIVLDEEHETTYKSEQVPRYHARETAIERAAIEGASV VLGSATPSLESFYRCRRKEYTLLELRNRTQSLELPDVYTVDMRKELENGNRSILSDRLKG MIALRLERGEQTMLFLNRRGYAGFISCRACGYVVKCPHCDVSLSAHRNGRLVCHYCGHEE PSVSACPSCGSTFIGGFRAGTQQIEDIVKKAFPKARVLRMDMDTTREKDGHEKILESFAS GEADILIGTQMIVKGHDFPNVTLVGILAADMSLYSNDYRAGERTFQLLTQAAGRAGRGSG KGEVIIQTYSPDHYSIRMAAAQDYEGFYEAEMEYRELMGYPPVEQLLAVLMTGRDEQLLE KAAGYVKEYVVRIGRGGRLQVIGPASPGVGKVNDVYRKVLYIKCGEYRLLTEAKNRLEQY IEINRGFQTLRIQFDFNPMNVF >gi|224461045|gb|GG657759.1| GENE 1336 1379360 - 1380832 1798 490 aa, chain - ## HITS:1 COG:CAC2129 KEGG:ns NR:ns ## COG: CAC2129 COG0769 # Protein_GI_number: 15895398 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Clostridium acetobutylicum # 1 484 1 480 482 388 44.0 1e-107 MRLTDLLERLEYEVVQGSEKAEVTELTNDSRKVVPGSAFVCISGAVSDGHAYVKEVAEKG AKAVIVEKQVEAPDGVTVIHVDDTRYALALMSAAYFGYPAEQLKVIGITGTKGKTTTTYM VKSILEGVGHKVGLIGTIETLIGGKAIPASNTTPESFTIHKYFKEMVDAGCDCVVMEVSS QGLMLHRTAGIEFEIGIFTNLGEDHIGPNEHKDFEDYKRCKGILFTQCRLGIANVDDRWF EDVFRNATCRTETFGFSEKADLRATDVEHISRPGYLGVKYHVSGLMDFDVEIDIPGEFSV YNSLTAIAVCRHFDVPAEEIKKALKVAKVKGRIEMVKVSDDFTLMIDYAHNAMSLESLLA TLRDYDPGRLVTVFGCGGNRSRTRRFEMGEVSGKLADFTVITSDNPRFEEPQAIIDDIIT GIERTDGKYTAICDRKEAIRYAIENGRPGDVIILAGKGHETYQEIKGVKYDMDDRVLIAE VLEEQGAHVR >gi|224461045|gb|GG657759.1| GENE 1337 1380997 - 1382220 1109 407 aa, chain + ## HITS:1 COG:FN0733 KEGG:ns NR:ns ## COG: FN0733 COG2195 # Protein_GI_number: 19704068 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 5 404 11 410 412 387 49.0 1e-107 MKAYERLLKYVAVRTPSDENSETVPSSQCQFDLAKMLEEEMKALGLTGVHTDSQCYLYGK IPATPGYEDKTAIGFIAHMDTVSDFCGHEIKPVITENYDGKDLVLGESGRVLSSDTFSHL KGLKGRTLITTDGTTILGADDKAGIAEILTMAERLRDENIPHGPVSVAFTPDEEIGTGAA HFNVEDFGAEYAYTLDGDTEGEIQYENFNACKARFDIRGFNVHPGSSKDTMINASLLAME INSLLPGMETPRGTEDYEGFYHLMSMSGECGEAQLNYIVRDHNKEFFEARKHTLRLIEKN MNEKWGEGTVKLTITEQYKNMAEIINGCMHLIDNAKTACERAGVKPLILPIRGGTDGCQL SFKGLPCPNLGTGGHAYHGPYEHITVEGMDKSVDIIMELVKLYAAGI >gi|224461045|gb|GG657759.1| GENE 1338 1382286 - 1383155 1250 289 aa, chain - ## HITS:1 COG:BH1678 KEGG:ns NR:ns ## COG: BH1678 COG1284 # Protein_GI_number: 15614241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 3 282 4 279 290 122 26.0 1e-27 MKKINWKETGIDILVDIAAGMVIAIGVYNFALNANFPVAGFSGIAIVMYHLLGLPVGAGT IILNIPVAIFCYKFLGRNFFLKSLKSMIISSFLMDYVAPYLPVYEGSRLLAALCMGVLCG IGYAMIFMRGSSTGGQDFISVAIKKVRPHMTLGIITFALDILTIILGSVLVFKDVDGLIY GIIVTYLMAIVMDRIMYGIDEGKMTFIVTEHGEDVAEQIDEYSGRGSTILKGMGSYSKKK KDVVMCACNNKQMYTIKKMVHNIDPQAFTIIMESNEVVGEGFKEEIKEL >gi|224461045|gb|GG657759.1| GENE 1339 1383333 - 1384586 990 417 aa, chain - ## HITS:1 COG:CAC0285 KEGG:ns NR:ns ## COG: CAC0285 COG0389 # Protein_GI_number: 15893577 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Clostridium acetobutylicum # 1 404 1 392 396 363 47.0 1e-100 MRRIVFHIDVNSAYLSWTAVEQLKNGAETDIRTIPAIIGGNQESRHGVVLAKSLPAKKFG IRTGEPVANAFRKCASLHMEPPDHKLYHEYSSQMMTFLRTYTPDIEQVSVDECYMDFTGI SGRFTSPVSGALEIKNRIYEKFGFTVNIGISTNKLLAKMASDFEKPDKVHTLFPEEIKVK MWPLPVWELYMAGQSSVETLQKLEIRSIGDLAQADPEILELHLKSHGRKLWEFANGIDNS EVITEKVEAKGIGNSTTLSKDAVTEEEAKKVLLGLAESVGARLREAEQKAGMLSVEIKYY NFETASHQRQIPKPTNSDTVIYHTAVELFRELWTKVPIRLLGIRSSKLVKQDEPEQMTIF DIPVSSSKETDAARDEKQKKLDRALDEIKKKYGRDVVRRGRFLEAAHDKEQGDNETH >gi|224461045|gb|GG657759.1| GENE 1340 1384652 - 1387246 1797 864 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 854 1 806 815 696 44 0.0 MNINKFTQKSLQAVQDCERTAMEYGNQEIEQEHLLYALLVQDDSLILKLMEKMGVEKTVF INRVEEGLRKRTKVQGGQAFVGQDLNKALIHAEDEAKQMGDEYVSVEHLFLSLLKYPNKE LKVIFRELGIKRDLFLQALATVRGSQKVTSDNPEATYDTLNKYGSDLVERARDQKLDPVI GRDSEIRNLVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEALKDKTIFSLD MGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMDAGNMLKP MLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPTVEDAISILRGLKERYEVFH GVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTELDSMPAELDELQRKIMQ LEIEEAALKKEEDRLSKDRLGHLQQELAELREQFAGKKAQWDNEKVKVERVQKVREEIEQ VNKEIQKAQQSYDLEKAAELQYGRLPQLKKQLEEEEGKIKDEERSLVHESVTDEEIARIV SRWTGIPVARLNESERSKTLHLADELHRRVIGQEEGVELVTEAIIRSKAGIKDPGKPIGS FLFLGPTGVGKTELAKALAESLFDDENNMVRIDMSEYMEKYSVSRLIGAPPGYVGYDEGG QLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTILIMTSNI GSAYLLDGIDEAGNISQESQNAVMDDLRAHFRPEFLNRLDEMIMFKPLTKENIYAIIDLL TEDVNKRLADKEISISLTEAAKNMVVEGGYDPTYGARPLKRYLQKNVETLAAKLMLQGDI GAGETIVIDVENGKLAAGARKNLL >gi|224461045|gb|GG657759.1| GENE 1341 1387400 - 1388878 1232 492 aa, chain - ## HITS:1 COG:no KEGG:ELI_1104 NR:ns ## KEGG: ELI_1104 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 483 1 482 500 155 25.0 4e-36 MKEGTQFSNLIYEYFFLRFRFGYYRYGDTLPAIDILCHEFNVSDQTVKAALRRLRAEGYI SMRNGQATKVIFQQSKEEFGDFAVHFYSERWEAFFDLYESSELILVPIMMEGMRRMVPED FQYVRKLAKRAFAEDLMQFFRYILQKAENPLALNLFWEITLFWGFPFARMKQCQFCYDAE LVRQRMNTLLAAAQEKKWDIVRNSLIEYQRGDVSRVAAYLEPVVRHRPGKEQVSFVWRIY RERPQLCCSLAIRILYEIYMGEFREREYLPSYEKMAQRFNVSLSTVRRTINVLNQVGAAE SVNGVGTRIFSMGKRCREPDLSSLAVRQNLALFFQSFELLIYSCEEVLGRLLVEMRQSER EELLDCLEENRNTGQCAKSLWHMLIWTARYSTLSSVREIYARIFGLFLWGYPLRGSKNET TELELADVQLTDALIQALREGEYARCAVLVKEKLLKEFPMVEVYLRRNKIYEGELRSSIS IRLMLTDVKKDL >gi|224461045|gb|GG657759.1| GENE 1342 1389043 - 1391481 2137 812 aa, chain + ## HITS:1 COG:RSp1178 KEGG:ns NR:ns ## COG: RSp1178 COG0642 # Protein_GI_number: 17549399 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 260 654 265 659 676 206 35.0 2e-52 MTDQGNEIFSEGSKTNFTPADYEYSTLMRLLGVSVSKHLLDEHFTLVWANEFYYEFTGWS KEEYETTFHNRPDLYYKKDPKEWQELTNVVYNAIAAGEKGYKLLSRFRRKNGDYIWIQLS TQFSDEYIDGHQVAYTVMTNIDDVVRMQKEQSVTYESLPGFVAKYRIDPHLNLTLLEGNS RFMEYFGAGQDSDNSLHKENITKNLDVILSQRENFLSGKPAHFVMKVQSRTGQMLWLQVN ASCVDWQEGCPIYLAIFIDITDITELRQMQKKLTEQADALRDALSVAEHANQAKADFLSR MSHEIRTPMNAITGMTTIAAANINDRQRVADCLEKIASSSKHLMTLINDVLDMSKIDAGK MKIAHETFDLQNVTESITAIIYPQADAKGLKFSVPLVDITDTVLTGDALRLNQVLINLLS NALKFTPEGGAVRLEIRQLQKKAGRVRLRFTVSDTGIGMSQEFMKHLFTPFEQESTATGR SAGGTGLGMPITKNLVTLMGGTVSVRSEPGKGSTFIVELDFDLPDGRSSELPQMRQTVES LKVLVTDDDKDSCIYTALMLKNLGIESDWVLTGQECLESVRRAHMDGSDYDVCLIDLKMP DMNGIEVTRRIRELADPDTTIVIITAYDWSSIEKNARQAGADAFLSKPVFASTLYDTLLS ATTGAKKIILLPSSGIEKHWPGLSGRHVLLVEDNELNREIATELLKMTGVMVDCAADGRQ AFDMFLEHGDRYDLILMDVQMPVMDGYRATEAIRSCGHPRAASIPIIAMTADAFHEDIVK AGDAGMNGHLAKPIDQELLYKTLTDIISKVSS >gi|224461045|gb|GG657759.1| GENE 1343 1391496 - 1392392 906 298 aa, chain - ## HITS:1 COG:L88643 KEGG:ns NR:ns ## COG: L88643 COG5263 # Protein_GI_number: 15674205 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Lactococcus lactis # 130 282 299 462 483 62 29.0 8e-10 MKYTCEEGKVMANNRRRRQQVRRQLVILGGFVVLIAATVIGFSTQRSKKDEALAAAKIEE KEEQKDEQKTEHKNIEPEKETAAERLARVKKQASAAGYPKGVIELLSKNEETVQFVEEYE KKKDAPYADNIGAGFVKGQIPPLLQWDERWGYAPYGTSIIAVSGCGPTCLSMVVSGLTGD WSVTPAKVAAYGTENGYVDEENNTYWRFMEEAPANWNVSVKELPLVEQQIAAELQAGHPV ICSVGPGDFTDNGHFIVLTGYNNGEVTINDPFSRKNSSRTWKFSEIQDQIAAMWVYSL >gi|224461045|gb|GG657759.1| GENE 1344 1392745 - 1393680 927 311 aa, chain + ## HITS:1 COG:Cj0373 KEGG:ns NR:ns ## COG: Cj0373 COG1052 # Protein_GI_number: 15791740 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Campylobacter jejuni # 1 308 1 306 311 273 47.0 2e-73 MNIVFLDAKTIGDDIDLSGFEALGTVRKYPFSTSEQVPERVKDADVIIINKVQINKATIG DARRLKLVCVTATGTNNLDKEYLDSHNIAWRNVAGYSTESVAQHTFAMLFYLLEKLRYYD DYVKEDRYTNDTVFTHFEEVFYELSGKTWGIIGLGNIGRRVASIAEAFGAEVIYASPSGS APQEGYHQTDMDTLLRSSDIISVHAPLNEHTENLIDSDKLSKMKKSCIFLNLGRGPIVVE EDLCSALENGDIAAAGLDVLRTEPMSPGNPLRRIKDSRRLFITPHVAWASVESRTRLMNI ILGQIKEFWAD >gi|224461045|gb|GG657759.1| GENE 1345 1393694 - 1394116 453 140 aa, chain - ## HITS:1 COG:VCA0194 KEGG:ns NR:ns ## COG: VCA0194 COG1226 # Protein_GI_number: 15600964 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Vibrio cholerae # 28 98 132 206 280 58 36.0 5e-09 MKKGRVFWSILKRTNTDKIAAGFGVYFLVSAFFIMLVEPGIHRFGESVWYCFSVVTTIGF GDFTAVTVLGRTASIVLGIYGVIVLALIPGVVASYYMEVVKIRARESAEEFLYKLEHLEE MSREELRELSEQVKKVKLKK >gi|224461045|gb|GG657759.1| GENE 1346 1394133 - 1394618 586 161 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0324 NR:ns ## KEGG: Cphy_0324 # Name: not_defined # Def: peptidase A8 signal peptidase II # Organism: C.phytofermentans # Pathway: Protein export [PATH:cpy03060] # 15 153 13 147 149 72 30.0 4e-12 MIILSAGIAALLFGVDLLLKQYVEENMDCGEEKEAVKGKVILRKVYNKGFMLHALERYPW LVRGSAAFLGAVLFIYDVLLSGKKGRRVEKAGTAIFSAGAYSNIFDRLVRGKVIDYIGFK SKNDFLSRLTVNLADLCIVAGLAVMTLGKLLTGAGPRSKGA >gi|224461045|gb|GG657759.1| GENE 1347 1394619 - 1394909 300 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569249|ref|ZP_03778274.1| ## NR: gi|225569249|ref|ZP_03778274.1| hypothetical protein CLOHYLEM_05331 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05331 [Clostridium hylemonae DSM 15053] # 1 96 9 104 104 134 100.0 2e-30 MADFFEDLGKRISDVANDIGKKTEDTLEIQRRKSDIRTLRRASERDLMDIGRMIYDKFQK GEINDTDCITLCEEIEKRDIQIEKQEEEISRIRGEV >gi|224461045|gb|GG657759.1| GENE 1348 1394946 - 1396652 1893 568 aa, chain - ## HITS:1 COG:CAC3245 KEGG:ns NR:ns ## COG: CAC3245 COG1404 # Protein_GI_number: 15896490 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Clostridium acetobutylicum # 59 566 591 1098 1118 258 32.0 2e-68 MDRETCQEQILSQGYWDFIFPGYRSLSDMGIQDDRYCIQNMDYGYKAIYINSEGMEPLSI ERYWYNSIPNCYSLIDMEALNQSGITAAQNYPALQLMGANIMIGFVDTGIDYKNPIFRNL DGSTRIAGIWDQTVHDGTPPEEFAYGSEYTEEAINEALRSETPEELVPTVDTNSHGTFLA SVAAGGADVENQFLGAAPESTIAVVKLKEAKDYLKAFYSIDPEAVCYQENDIMLGLRYLS TLAEERNMPLVICIALGTNFGGHNSATLLSSILNSYSMTMDRIVVIGNGNEANQRHHFSG RFEDMGERREVEIRVGAGVGGFVTELWTSVPNLMTISIVSPSGERTPVISVRQGSRYVYT FTFDQTIVTAEYRLLTENNDSQLIFMRFDGPSEGIWRIVVQPLQLSDGVFHLWLPMQEFL SGEVFFLEADPETTITEPGSTVGGMTVAYYNGTDNSIDINSGRGYTRSGIIKPDFAAPGV GVTGAVPGGRFTKRTGSSVAAAITAGASALLAEWVVREQTVNLGVGTSEIRNLFVLGAQQ RPLLEYPNRQWGYGTLDLYQTLDRLRRL >gi|224461045|gb|GG657759.1| GENE 1349 1396719 - 1397978 1592 419 aa, chain - ## HITS:1 COG:CAC0444 KEGG:ns NR:ns ## COG: CAC0444 COG0475 # Protein_GI_number: 15893735 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Clostridium acetobutylicum # 7 401 5 390 393 225 39.0 2e-58 MNSYSYLLDLAVILLCTKLLGLATRKVQMPQVVGALLAGLLLGPAVAGVLTETSFIHEVA EIGVIVLMFCAGLETDIQELKASGKASFVIALCGVLVPLAGGFGLAYFFNRPDMIASDAD ASIFLQNIFIGIILTATSVSITVETLKEMGKLKTRSGNAILGAAIIDDILGIIALTVVTS MADPSVHIGTVMLKIAGFFVFSGVAGFIFYKVYKAWTEGASRGLHRHVIIAFVFCLLMAY IAEEYFGVADITGAFIAGLIISNTERSVFIQTKFDTLSYMLLSPVFFASIGLKVILPKMS GMIVAFSLLLMLVAVLTKIVGCGLGAKACGYKPYQCRRIGVGMISRGEVALIVASKGSAM GLMSSAFLGPVVIMVVFTTIITPILLKIIFKKGPDLPVAKEKEVSSYYEGASILRGEEK >gi|224461045|gb|GG657759.1| GENE 1350 1397978 - 1399417 1932 479 aa, chain - ## HITS:1 COG:TM0146 KEGG:ns NR:ns ## COG: TM0146 COG1219 # Protein_GI_number: 15642920 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Thermotoga maritima # 37 471 4 403 406 365 47.0 1e-101 MSDKDKKNEPNETEIEKVDGTDVEVEETKKEDDEYEKVCFICHRPESTAGKMIELPNNIS VCSDCMQKSFDAMSNGQIDYSQLMNMPGVQVFNMADMEQQNIPKQQKIKKKKEGEDKKPL IDIREIPAPHRIKASLDEYVVGQEYAKKVMSVGVYNHYKRVATDTMDDIEIEKSNMLMIG PTGSGKTYLVKTLARLLDVPLAITDATSLTEAGYIGDDIESVVSKLLAAADNDVEKAEQG IIFIDEIDKIAKKKNTSQRDVSGESVQQGMLKLLEGSDVEVPVGANSKNAMVPLTTVNTR NILFICGGAFPDLEGIIKERLTKQSSIGFGADLKDKYDHDKTILEKVTVEDLRNFGMIPE FIGRLPIIFTLRGLDQDMLVKILKEPKNAILKQYQKLLALDEVKLDFDEGALQAIAGKAM EKDTGARALRAIIEEFMLDIMYEIPKDDNIGEVTITKEYIEGTGGPVIMLRGQEAMRLR >gi|224461045|gb|GG657759.1| GENE 1351 1399435 - 1401405 2241 656 aa, chain - ## HITS:1 COG:lin1870 KEGG:ns NR:ns ## COG: lin1870 COG0272 # Protein_GI_number: 16800936 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Listeria innocua # 6 656 4 668 671 351 35.0 3e-96 MSRQKKARMQELVEQLNKAGKAYYQDAEEIMSNYEYDRLYDELVSLEKELGITLSGSPTA NVGYEVLSELPKERHDSPMLSLDKTKDVEELKKFAGGQKVMMSWKLDGLTIVLTYRDGTL YKAVTRGNGEVGEVITNNARVFRNIPLQIAYKGELILRGEAVIGYKDFEKINGEIEDVDA RYKNPRNLCSGSVRQLNNEITAKRNVRFYAFTLVQADGVDFHNSRVCQMEWLREQGFEVV EFCEVTKDTLEAEVIKFSEKIAENDFPSDGLVLVYDDVEYGRSLGRTSKFPRDSFAFKWA DETKETKLLEIEWSPSRTGLINPVAIFEPVELEGTTVSRASVHNLSIMEELELGVGDEIE VYKANMIIPQIAENLTRSGVKDIPLHCPVCGGDTEVKQVSNAKALYCINPDCQAKHLKSF ALFVSRDALNIEGLSEATLEKFIAKGYIKEYADIFHLERFQDEIEKMEGFGEKSYRNLIE SIEKARTTTLPKVIYGLGIANIGLANAKMICSEFGCDTDKMLAAGPEELSAIQGVGGVIA GAFVDYFSDERHVRIFRDLLKELTIPAEETEQKEQRFAGVNFVITGSVEHFANRGEIKEL IENLGGKVTGSVTSKTNYLINNDVTSTSSKNKKANELGIPIISEKDFLEMLGESQG >gi|224461045|gb|GG657759.1| GENE 1352 1401353 - 1402096 666 247 aa, chain - ## HITS:1 COG:VC2223 KEGG:ns NR:ns ## COG: VC2223 COG1187 # Protein_GI_number: 15642221 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Vibrio cholerae # 2 235 20 247 340 222 50.0 4e-58 MRLNKFLSEAGVCSRREADRLIEEGRVTVDGKKAVPGMQVDPSSEVRVGKKRIRSKDKKT VLAVHKPAGIVCTEDKRVKNNIIRFLKYPERITYAGRLDKESEGLLIMTDDGELINGMMR SRYGHEKEYKVWVNKPVTEEFVNRMSSGVRLVDKEKGLDEVTRPCEVRQCGTYIFTIILT QGLNRQIRRMCEALGYKVKRLVRIRIMNIELGNLKPGAYRKLTEQELNELYEQTEKGKNA GTGRTAE >gi|224461045|gb|GG657759.1| GENE 1353 1402083 - 1403264 1177 393 aa, chain - ## HITS:1 COG:no KEGG:CTC00591 NR:ns ## KEGG: CTC00591 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 8 387 5 386 386 290 40.0 9e-77 MKQKSDRRKRKVQIKKAAALLFLAMLAVICLVNLVHRDKEFSQKENRMLEQKPAFTLSGV TGGRYMKQYESYKSDQFAARDLWVSLKTNVDLLMGRRDSNGVFKGKKNYLLEDIAKPNEE QLEENIEAIRAFEQSYVDIPVYFALVPNAANVMSDKLPALAETEAQEKQFENIRKELGGK INWVDVQKVLKKHRNEDIYYHTDHHWTTLGASYAYEELAKAMGLDTANGPKWEKYTVSND FNGTLSATSGYEQGYREPIHIYVPEKGEKSPDIVLNYVDEQKKTASLYDASKLKEKDQYA MFLGGNHAVIDLKTTAASTERLLLVKDSYANCLVPFLTPFFREIIIIDPRYYYGDIHQVM EENKITDILFLYNGNTFVEDNSISGVLKNNETE >gi|224461045|gb|GG657759.1| GENE 1354 1403274 - 1404677 1387 467 aa, chain - ## HITS:1 COG:CAC1564 KEGG:ns NR:ns ## COG: CAC1564 COG1696 # Protein_GI_number: 15894842 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Clostridium acetobutylicum # 1 467 1 473 473 365 45.0 1e-101 MLFSSIVFLFTFLPIILILYYLVPGKFKNPVLLAGSLVFYAWGEPFYIFLMILSILFNYI SGLDIARHLNNRHEARKSLIFNVAVNLCILGFFKYEGFVLDSINSVLPVDIPYRELALPI GISFYTFQTLSYIIDVYRGNVRVQRNLLDFALYVSMFPQLIAGPIVKYADIQRQLRIRQE SWGKFGDGALYFIRGLAKKVLIANTTGMIFTKVTSLGAADTSVLTAWLGCAAYTFQIYFD FSGYSDMALGLGKMFGFQFLKNFDYPYISKSITEFWRRWHISLSTWFKEYVYIPLGGNRA GTGKHVRNILVVWLLTGLWHGASWNFVVWGLYYGILLLAEKYLLYRVLERLPGFLRHVYS IVLVMVGWVFFFSPTLGSAVQYLKLMFGGGSGLADKEGFYLLVTNLVLWAAAVIGSTPAV HDLYERFVYGSGKNRIAVNCTVYGILFLLCIAYLVTETYNPFLYFRF >gi|224461045|gb|GG657759.1| GENE 1355 1404695 - 1405189 535 164 aa, chain - ## HITS:1 COG:no KEGG:CbC4_0499 NR:ns ## KEGG: CbC4_0499 # Name: not_defined # Def: lipoprotein # Organism: C.botulinum_BKT015925 # Pathway: not_defined # 32 164 31 163 164 63 28.0 2e-09 MKNKKKVRIDHINILKYGMVLLLAAYVILLVSREGGTKTPIKTVSKNVVSVMGTEGMKKG TTQDLKKYYGLNADDYKGVTLYIPDDVMGVKELLIVRLEDDSQADVVETAAQKRLDTQKK SFEGYGAAQTKLISSAVLESRGDYVLMAVTGKADAVQTAYRKSL >gi|224461045|gb|GG657759.1| GENE 1356 1405189 - 1406055 1082 288 aa, chain - ## HITS:1 COG:no KEGG:CbC4_0498 NR:ns ## KEGG: CbC4_0498 # Name: not_defined # Def: platelet activating factor acetylhydrolase-like protein # Organism: C.botulinum_BKT015925 # Pathway: not_defined # 105 280 66 238 246 95 34.0 2e-18 MYIQACEAMRRAGIWCMKEKSVIVKDKNKKTWGSGEEQDKVLRMAVTTVIILLIAGGIII AVKLMNPREDITEGTKKLEELEKADLKAAENKIEELEKAERAADEERKSRPVNERFANSL VLGDSITQGLYEFGVMDQSLVIAEKGAEVTRAEDTGTLDMIRKAQEAKPQNLFLTFGMND VEAARGDAAVFAEGYGKVLDEIKAAMPDTKVYVNCVLPASRKAVDNNEWYGNIPEYNKKL KEICEEKDVIFIDNTGLVKEEYYADDGIHQAPDYYPGWVENMAEAADL >gi|224461045|gb|GG657759.1| GENE 1357 1406208 - 1406690 583 160 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1818 NR:ns ## KEGG: bpr_I1818 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 9 154 10 161 167 117 41.0 1e-25 MITLTPDTKTCMSHLLLKDTFDSLSLIEGEITTYNKFSIDGHIHKDFFEDAPDRDYSYWH ELRSYCLSLIKGKRTPLGFKFVLSLGKEKFTGFLTENGLTFQPGDIQGLYMNLRYDGTRL VCVTGTSMNTFTMDKSLDEAWDRWVRTFFSDAGIAFEGDM >gi|224461045|gb|GG657759.1| GENE 1358 1406761 - 1408827 2824 688 aa, chain - ## HITS:1 COG:sll0430 KEGG:ns NR:ns ## COG: sll0430 COG0326 # Protein_GI_number: 16332281 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Synechocystis # 4 688 5 657 658 443 38.0 1e-124 MAGKKGNLSISSENIFPIIKKWVYSDHDIFVREMVSNGCDAITKLKKLDMMGEYQIPDDY KPSIQIIVNPKEKTLKFIDNGVGMTADEVEEYITQIAFSGATEFLEKYKDKTTEDDMIGH FGLGFYSAFMVADEVHIDTLSYKEGAAPVHWVSEGGTEYEMEDGTKEGVGTEITLYLNED SVQFANEYRVREVVEKYCSFMPVEIFLSNVDAEQEYETIDEADLKEDDVVVEHIHEEAKM EEKENENGEKEMVEVSPAMEKVKINKRPVSLSDIHPLWTKHPNECEKEDYLDFYRKVFMD YKEPLFWIHLNMDYPFNLKGILYFPRINTEYDSIEGTIKLYNNQVFIADNIKEVIPEFLM VLKGVIDCPDLPLNVSRSALQNDGFVNKIADYISKKVADKLNGMCKTQKEEYEKCWDNIS PFVKFGCLKDEKFCDKMKDSILFKNIDHKYLTLKECAEANGGTLEEPKEKEDTASEDAEN AESKEEKTTIYYVTDEQQQSQYINLFKAQGQDAVILNHNIDSAFITQMEQRNPSLSFQRI DADITDSAKEEVAEEEKEEFQKITDSLVEIFRKELENDKLDVKVEKLKDDNTAAVITLSE QNRRMQEMMKMYGMAGMDAGMFGGESTLILNANHPLVKFVVEHRRAKSVPVICRQLYDLA MLAHKPLSPEEMTAFMQRSNEIMLLLTK >gi|224461045|gb|GG657759.1| GENE 1359 1408979 - 1412407 3886 1142 aa, chain - ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 1142 1 1136 1136 660 36.0 0 MGTKATRKDFYMEIRRSLGRFLSIFFIVALGVAFFSGIRSSEPDMRATGDAYFDGADLMD IKTVSTLGITEDDIRSIGKVDGVKRAEGGYSADFLCQGEDREIAVHVMSMLPSMNKVTVT KGRLPEKPGECLADDEMHYKVGDTVVLKSGDGTKVTDTLTTDTLTVVGTGNSPCYISFNR GNTTIGTGSLTGFFVVPASTFDMDVYTEAYVQAEGAKKLTAYTDAYENRIKKIQDNIKAI TGERGSIRRQELTDEAEEELGRAEKELADGREEADLELLKAEQELTDGETKLNGAREQTA EGRRQLEEGKATLTTKQKELDSAGIQYESGRKQLEEGRTAYEKAMADFGAQKAAFDRQKA DVDAQFAPQKEKLDQLKGLCDAKEAAVVQMQEQIKDLADTAARLQQEMDALDITDPKYAE KYNSLESQKNQAEADRNDLRDNKLPDAQKDLQESRTLYGQSQKAYDAARKDADSKLAVYA QKLDSGAAQLNDTKTKLSGSEAALSSVWSQIQDGQAQIDSGWAQIEKQEAALADAESEIA ASAAELADGWKEYEAAKEKAEQKLADGEQKIADAKDEIGKIKDPKWYVYDRNTLAEYAGY GDNADRMRAIGKVFPVLFFLVAALISLTSMTRMVEEQRTEIGTMKALGYNKLTIASKYLG YALLATLGGSIFGVLLGEKVLPYIIIYAYGIMYHHIPDILTPYNLTYAAAATLAALACTL GATLAACYKELSAEPAVLMRPPAPKNGKRVFLERVTFIWKRLSFTWKSTVRNLMRYKKRF FMTIFGIGGCMALMLVGFGIKDSVFAISELQYSEIQVYDGMAYLEENIPEAKEKEVEDFL KNNADVRQYTEVNMRNVTLVNGGRERDAYEVVPGSAKELEKFINFRDRRSHKKYTLTDEG AVVSEKTAKLLGVKAGDTIYIKDEEDGNRPVKIQTVCENYMGHYIYLTPVLYEEVYGKPA EYNCYFFKAEDPSKSALARTGQEILKQDGVLSISYMSDIQKQLDDMLKSLNLVIVVLIVS AGMLAFVVLYNLNNINITERQRELATIKVLGFYDPEVAAYVYRENVILTLMGAGTGMIMG RLLHLFVIRTVEVDAAMFGRNINFPSYIYSLLFTVAFSAIVNWVMYFKLRRIDMVESLKS IE >gi|224461045|gb|GG657759.1| GENE 1360 1412418 - 1413110 334 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 225 2 226 245 133 36 4e-29 MTLDNVRKVYHMGEVEIVAADGIDFQIEKGEFAVVVGPSGAGKTTVLNILGGMDTATEGR VQVDGETISGYNARQLTAYRRDDIGFVFQFYNLIPNLTALENVELALQICRDPMDAEEVL RDVGLGERLSNFPAQLSGGEQQRVSIARALAKNPKLLLCDEPTGALDYNTGKSILKLLQD TCREKGMTVILITHNQAITPMADRVIKIKNGKVSRMIENDKPVSVDSIEW >gi|224461045|gb|GG657759.1| GENE 1361 1413291 - 1413794 320 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229884790|ref|ZP_04504247.1| acetyltransferase, ribosomal protein N-acetylase [Sebaldella termitidis ATCC 33386] # 18 159 17 158 169 127 43 2e-27 MSQTRLVPAVTDSEIHDIAVLAEEIWHEHFTDIIGEEQVNYMVDKFQSYPALKEQIQNGY EYYQIHSGSTMAGYTGVHEDDGALFLSKLYIKKDCRGQHLASEAFRYLTALCRKRGLSRI WLTCNKHNANTLAVYSHLGFSITDEQVADIGNGFVMDDYILTYEMGI >gi|224461045|gb|GG657759.1| GENE 1362 1413865 - 1415013 1245 382 aa, chain - ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 14 381 14 382 383 243 38.0 4e-64 MKDYSFKIPQNIEFGIGSLKKLPEILKKNKSDNVLLVSDRGLGSIGVVKKIQDIILDGGI KCTTYLDVIPNPTVDIVNDAAALYKECKATSVVALGGGSSMDVAKAVGVLVNYGGDITDY EGFDTVPGPIVPMIAIPTTAGTGSEVTASSVITDESRNYKLSVISYEILPKYAVLDPELI MTAPASIAASCGVDALIHAIEAYISVKATPFSDAMAEKAMELIGRNIRRFVANRKDEDAA CAMMAGCNFAGIAFAWAKLGNVHAMSHPVSAYFHVAHGVANSILLPTVLRYNALADKGRY EVIYNYIRESSGNAERFEPEMLVEEVIKLNADLGIPKSLSEVGVKEETIPAMAKDAMKSG NILANPRQTTVKDVEELYRKAL >gi|224461045|gb|GG657759.1| GENE 1363 1415042 - 1415962 1277 306 aa, chain - ## HITS:1 COG:APE1072 KEGG:ns NR:ns ## COG: APE1072 COG0074 # Protein_GI_number: 14601168 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Aeropyrum pernix # 1 292 6 297 297 261 46.0 2e-69 MSILIDQDTAMLIIGITGKQGRIHCKRTLESKARLLAGVAPGKGGQSVEGVPVFETVADA RAVFPEIRAAMLLVPKQFVRDAAFQALDEGIRLLAVITEFVPVMDALQIVHKAKALDAQV VGPNTIGVISPGKSKLGIMPDYIYGKGHIGIISRSGTLTHETASNLTFKGFGLSTCVGIG GDAVVGMDHADVIEYFAQDDETDAIVIIGEIGGTSEEMAAAKIKELNLKKPVCAYIAGMY APENKRMGHAGAIVSGGMGTVRSKIAALEDAGAVICPTLGKIVEFMDEYNRRTGGRLQSL EPQIDG >gi|224461045|gb|GG657759.1| GENE 1364 1415946 - 1417097 1204 383 aa, chain - ## HITS:1 COG:BS_sucC KEGG:ns NR:ns ## COG: BS_sucC COG0045 # Protein_GI_number: 16078672 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Bacillus subtilis # 1 373 1 384 385 215 35.0 2e-55 MDYLEIEGKAQLERFGIPVNESILLTDDQVPDGIEYPCVLKGQILAGKRGKAGAVRVVKS KEELTEVKKIIEGISINGHTMEGVIACNFLPISEEYYLGMTLDVKNRAVIMLFTPFGGMD IEELAAAAPEKLLRFDCTEGFDAEAFRMAAAVFDLPAARMEQVADIARKLARACFALDAT TIEINPLAVLEDGRLIAIDAKLVIDDNSLYRQGDYIILPRTEQEKTPQEAEAEAHDLTYV ELDAKGDIGTMAGGAGIGMATMDTIRHYGGRVNNFLDLGGGVTAEKTYQAMCILLKNKST DYVFVNVFGGINNCADMAEGIARAYTELGIRKPVVVKSRGFNQEQGWSIYEKLGFPQTKY GTTDEAVQTLLKVKEARQNEYIN >gi|224461045|gb|GG657759.1| GENE 1365 1417191 - 1418573 349 460 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 12 429 43 460 477 139 27 8e-31 MNETKQKEVMTVEGLVSRSKAAQEQFAFATQEQADAAARAVCKVIYDNAEMLGPLAAEET RLGSEADKVTKCRMKSALIWHSLKGKKSVGIINRLEDRRMIEIAKPMGVVASIVPSTNPV VTPMSNAAFALKTRNSIIFAPHPRAVKCTKLLVGMFRTELAKLGFPEDLVLGLEQVSIED SGKLMSLADVIVATGGMGMVKAAYSSGKPALGVGAGNVQCIVDRDADLAEAASKIIIGRS FDNGLICLGEQTVFIPEEKFDAFIKEMEKQGGYYAAEPELADRLREGIFPGGGVISRDVV GLTAEKVAAQIGLDVPEGTRIIIARARALGHGDVLCREKMCPVLAVYPYGTFEEGVAMMV ENLECEGKGHSIGIHSNTPEHVEYAALQCSVSRVIVNQPAGTTGGGSPTNGFTATTTLGC GSWGNNSFSGNLNYDHLMNITRVGYPYEESYLPDPELAWL >gi|224461045|gb|GG657759.1| GENE 1366 1418603 - 1420033 1337 476 aa, chain - ## HITS:1 COG:SA1732 KEGG:ns NR:ns ## COG: SA1732 COG0471 # Protein_GI_number: 15927490 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Staphylococcus aureus N315 # 28 462 55 505 520 134 25.0 4e-31 MTLKRRFIYILAGPVIFALTVLLLSNALTMRGAQAVGVAFWLIFWWITRPVHITITGIMP VVANAVFNIVPMASVTAQYASDSIILIFGSTLICLPWKACGLDRRVALKALSLIGPSMKS QITVWLLASIALSMALPNVMVCALFTPIAIAMLSAAGYDDIPTCAPAVPILLAIGWGVSL GGAGTPLGGAMNLVAISYLEELTGHEFMYIDWVIRIAPYLIIAALVLLGSMLLMPMKVKK LDGTREYFNNSYRELGPMKRDEKICSILFLVAMLAAFTRPLYADILPALAPAYVYLTLGC LCFFIVAADKGFLLTWDTAQNGMMWGMMILFAGGMALGKLINDSGATARIADIVSGLALD GGLLTIVILVVFTRIISEVTNGTTAAAVSIPIVFGFTSELGLNPIPYWFITTLAYNAEFL LPLSVRAIPVAYGLDANKMLKAGTPMTIISMVVVIIFGYLAMQFWPAFGELSYLVN >gi|224461045|gb|GG657759.1| GENE 1367 1420281 - 1421075 602 264 aa, chain - ## HITS:1 COG:mlr8761 KEGG:ns NR:ns ## COG: mlr8761 COG1414 # Protein_GI_number: 13475230 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 4 262 8 264 269 112 28.0 1e-24 MTQPEESRHKASKTKSVSKTLAILSTFDETTPMQRTSDIAMKLDMNISTVSRHLNTMLDW GFLERDDSTGFYYPGLEIVALAGAALQNNDVFRHAFPELQRLSYKYGVHGHMGIPRKTEV AHLISSSSERTMELFIPMGHRQPMYCCAMGRALLAYMPYAKAQDILKNSDLQKRTPETKV DLWEISQELIHTKQKGYCLLLNELTEGKGSIAAPVFNRERLPIAAVSVSASAHSISQPQR ERELAKAVMAVAGKISGKLGYYPK >gi|224461045|gb|GG657759.1| GENE 1368 1421253 - 1421684 533 143 aa, chain - ## HITS:1 COG:SMc01160 KEGG:ns NR:ns ## COG: SMc01160 COG1959 # Protein_GI_number: 15964112 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Sinorhizobium meliloti # 3 130 5 130 152 62 30.0 3e-10 MTSEFAIAVHALVYLRHKDTVVSSEELAENICTNPARVRKVMAKLKKKALVGTKEGIKGG YHMAADASAVTLRCVCDALEEEVIKASWKSGSIDMDCMIASGMAGMMDGIYSEMNAQCKD YLETVTIEDVEKKVTGCPKKQKI >gi|224461045|gb|GG657759.1| GENE 1369 1421803 - 1421898 167 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKHMKRVSFVLLGAASGFAYYVFIGCRSGG >gi|224461045|gb|GG657759.1| GENE 1370 1421873 - 1422748 754 291 aa, chain - ## HITS:1 COG:MJ0750 KEGG:ns NR:ns ## COG: MJ0750 COG0348 # Protein_GI_number: 15668931 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Methanococcus jannaschii # 88 276 58 228 238 96 33.0 4e-20 MIKAIRNRMRLCVQIIFTAVTNGYLFGFLTGKIYTGPTKAACVPGLNCYSCPGALGSCPI GSLQAVLGSRDYKFSFYVAGFLIFFGSLFGRFICGWLCPFGLIQDLLYKIPFFRKRKNLP GHKVLKWMKYVILVLFVILLPLLVVDVIGQGSPWFCQYICPSGTLTAGIPLVLLNESLQN AVGGLFIWKVSLLVLIIVLALWVYRPFCKYLCPLGALYSFFNPVALYRYQVEESDCIKCG KCRKTCKMDIKVWEQPNSPECIRCGDCVKACPTKAIKRGKGGCHEKTHEKS >gi|224461045|gb|GG657759.1| GENE 1371 1422750 - 1422863 85 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFTAAALFFIIGITRGEAGTVLTKAVNICLECIGIG >gi|224461045|gb|GG657759.1| GENE 1372 1422893 - 1423492 534 199 aa, chain - ## HITS:1 COG:no KEGG:Tresu_1951 NR:ns ## KEGG: Tresu_1951 # Name: not_defined # Def: alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen # Organism: T.succinifaciens # Pathway: not_defined # 59 194 27 169 171 143 48.0 3e-33 MKRKRAKAITILTLSLVLLLTACGSGKEEKADAGSSKSSEGSKASDTSSSSASKKIFGTF ESETLEGEAVSDEIFSKADLTMVNIWGTFCGPCIREMPDLGELSREYADKGVQIVGLVSD VGKAKDEKAEEIVSTTKADYTHIIASQDLMTGILGSVNVVPTTIFVDKEGNQVGDVYSGA RDKDEWAGIIDELLNGVQQ >gi|224461045|gb|GG657759.1| GENE 1373 1423643 - 1424521 838 292 aa, chain + ## HITS:1 COG:BH3634_1 KEGG:ns NR:ns ## COG: BH3634_1 COG2207 # Protein_GI_number: 15616196 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 5 117 4 116 132 83 38.0 4e-16 MKEQIEAVQRMQNYIAAHLYEQITLAELSGASLFSPWHSYRLFKKWTNLTPAEYIRRMRL SASALRLRDEGCRITDIAFEMGFGSVDGYQRAFYREFGCNPKEYMENPVPLYLFTPYGVI YREIRKEEQTMEHVKSVFVQPVEKPVRKVIIKRGVKAEDYFPYCEEVGCDVWGLLMSIKS LEGEPVCLWLPDAYRTPDTSVYVQGAEVSADYDGPVPDGFDVITLPASTYLMFKGEPFEE EDYCQAIEEVREAVNKYDPSAAGYEWDTDNPRIQLEPVGTRGYIELLPVRRK >gi|224461045|gb|GG657759.1| GENE 1374 1424586 - 1426433 1472 615 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 428 554 6 131 270 84 35.0 8e-16 MMTRKEMKKAAKRNVRSHYILFVAVCLIAAFLNSEFSGTLDLLGENVQETSESGSSVKLE GVAGQQAGAMDVAWDILEGREKEGKELSRKIKEQQIEQSKSGSPVLGRSRGVLAHAVNAV TSGSVFVTVTASVNSLVRSNEITLFIFIIGGMLFLIAFWFFIKNLYVVISRRIFLEGRCY EAVPIQRFLYLLRLKKWTKAAWVMFVTYVFRFLWMFTVIGGVIKTFSYFLVPYIVAENPD VSAREAIRLSRKMMKGHKWECFVFGMTFAGWYILRIFTLGLSAVFYSNLYQTASFTEYYV QLRRQAKEKEIPGAELLCDTYLFEKAQSGEIEAVYADVIAVLEKPEEGIRQLRGIRRFFA EYLGILLFPSKEERAYEEDQAERIRIYSLKGAVELKCYPSRLSPVPEVEKRQKVETIHYM RHYSVWSLIMLFFIFSFTGWVWEVSLHLVNDGAFVNRGVLHGPWLPIYGSGGVLILVVLN RLRINPAAEFAGIVVLCGCVEYFTSYYLELTHNGQKWWDYTGYFLNLHGRICAEGLLVFG VGGMAIVYVAAPLLDNIIRKVQTRKLIPVCLLLLCVYAADTLYSSKHPNTGEGITDYQSG AAPEGIECQAYGRSI >gi|224461045|gb|GG657759.1| GENE 1375 1426466 - 1427896 1512 476 aa, chain - ## HITS:1 COG:CAC2669 KEGG:ns NR:ns ## COG: CAC2669 COG0064 # Protein_GI_number: 15895927 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Clostridium acetobutylicum # 4 476 2 473 476 491 49.0 1e-138 MSKQYETVIGLEVHVELATKTKIFCSCSTQFGGAPNTHTCPVCTGMPGSLPVLNKQVVEY AVAIGLAANCTITRECKFDRKNYFYPDNPQNYQISQLYLPIARDGHVEIEAGGKRKKIRI HEMHMEEDAGKLVHDEWDDTSLVDYNRSGVPLVEIVSEPDMRSAQEVTAYLEKLRTMIQY LGASDCRLQEGSMRVDVNLSVREAGTEKLGTRTEMKNLNSFKAVTRAIEGERQRQIELLE DGKEVVQETRRWDDNKEYSYAMRSKEDAQDYRYFPEPDLVPVVIDDEWTDRVRAGLPEFR DEKLKRYRKEFDIPQYDAEIITASKRLADIFEETTRLCGKPKKAANWLMVDTMRLLKEHG MEPEDITFSPVSLAELIRLADEGTINSTVAREVFEKVFEADVDPKLYVEERGLKTVSDEG ALREAVSKVIENDPKAAADYRGGKEKALGALVGQTMKAMKGKADPALVSRLLKEML >gi|224461045|gb|GG657759.1| GENE 1376 1427899 - 1429392 1649 497 aa, chain - ## HITS:1 COG:BH0666 KEGG:ns NR:ns ## COG: BH0666 COG0154 # Protein_GI_number: 15613229 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Bacillus halodurans # 11 475 14 477 485 491 55.0 1e-138 MSMTAVELGKKIKAGELSAEEAVEAAFLRIEKTEKDVHGFLALDKERALKRARQVQIQIK EGTMTAPLAGVPAGIKDNLCTAGMKTTCASRMLENFIPAYTAEAVRRLEQCGVIVIGKTN MDEFAMGSTTETSYFGVTRNPWNLHHVPGGSSGGSCAAVAAAECSFALGSDTGGSIRQPS SFCGVTGIKPTYGTVSRSGLIAYASSLDQIGPVARDVTDCAVILEAIAGYDKKDSTSMAR EHYGFAEALTDDVKGLRIGIPRDYLGKGLNAEVKETVLRAAEVLEERGAHVEEFDLSLTE YAIPAYYVIASAEASSNLARFDGVKYGYRSPEGGGLHSMYKKTRSEGFGAEVKRRIMLGS FVLSSGYYDAYYLKALRVKALIKQAFDRAFGQYDVILGPASPATAPELGSSLGDPLKMYL GDIYTVSVNLAGLPGISVPAGHDSKGLPIGVQLIGDCFREDNIIRAAYAYECATEKKYVR TAPSGAPVTEEAAEGRG >gi|224461045|gb|GG657759.1| GENE 1377 1429418 - 1429711 372 97 aa, chain - ## HITS:1 COG:lin1868 KEGG:ns NR:ns ## COG: lin1868 COG0721 # Protein_GI_number: 16800934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Listeria innocua # 5 93 4 92 97 63 41.0 7e-11 MAYKISDETIEYAGILSKLELSGTEKEDAKADMEKMLDYIDTLNELDTEGIEPMSHVFPL NNVFRSDEAENGDGSAHTLANAPVQKEGSFVVPKTIG >gi|224461045|gb|GG657759.1| GENE 1378 1429723 - 1430832 914 369 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569281|ref|ZP_03778306.1| ## NR: gi|225569281|ref|ZP_03778306.1| hypothetical protein CLOHYLEM_05363 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05363 [Clostridium hylemonae DSM 15053] # 1 369 1 369 369 658 100.0 0 MFGRKCTLCGGKVDSRGICEECGLDNNKSEKNYKINQAGCDGKPLTHVHETNAHVQPQKA QKEQKAQKKQGEQKERMKRPDYEDNYSMPRQRISGREKAKAKKKSAAGRVVGIITMILTV AGILLAVAEDHGEEISSWAESKLGDGQGAAGKAEYTYDPYKYTARTLSGDGDHAEYELST GHYIVGVHIPEGKYSARTQDDFDTIQTEDSENNIYLYEYEGKGDNYLGDLRLYDGAVVTV ACKDTVTLITDNGQTASMQPEMPNPLTESVSIAGGETKTAGTDFAPGIYDIYVTGESGMA DVTVYGEGDEEIDTVSLYIGEGSSDGMGFKYMVLPEGAEVVRTDGGPLSLVPSEMIASED YMEFYERLY >gi|224461045|gb|GG657759.1| GENE 1379 1430863 - 1432194 1480 443 aa, chain - ## HITS:1 COG:CAC2979 KEGG:ns NR:ns ## COG: CAC2979 COG0017 # Protein_GI_number: 15896232 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 24 443 15 430 430 371 47.0 1e-102 MEFLTGVKEKDTLEISGLLKTEAGESVKVNGAVHTIRNMGTVAFVILRKREGLLQGVYEE GAADFDLKDLREADTIEIEGILEKNEKAPGGIEIRMKHLTVLGRPADDMMPLPISKWKLN TSLEAKLNYRSISLRNLRERAKFRIQEGLTRAFRDYLYGQGFTEIHTPKIGARSAEGGAN LFRLDYFHRPAVLQQSPQLYKQMMVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMG YIDSFEEIMAMETGYIQYAMALLAGEYAAELKTLDITLPDAAKIPAVRFDEIKEKVAEKY GRKIKNPFDLEPEEELLISRYALEEWGSDFVFVTHYPSRKRPFYAMDDPADTRYTLSFDL LFRGMEITTGGQRIHDHGMLKDKIAARGMTEDGLEQYLEAFRHGMPPHGGIGIGLERFTM KLAGEDNIRETTLFPRDLSRLEP >gi|224461045|gb|GG657759.1| GENE 1380 1432594 - 1434156 1896 520 aa, chain - ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 9 518 6 511 512 353 41.0 3e-97 MKKDTTTTIKRAERFQIILIGEGILVGGIAGLVVLLYRMCLENAGAWRNAILDYAGRSPA RMAGWFLLLALMAVLTARLLKYEPMISGSGIPQLEGEMVGKLEQKWWKVLPAKFAGGFLC MLGGLALGREGPSIQIGAMVGKGVSKGLDRGKTEEKFLLTCGASAGLAAAFHAPLAGVMF SLEEVHKNFSVSVLLSVMTASLTADFLSSSVLGVDSVFQFDIVQALPQEYYGLILLLGVV LGILGAFYNWFTLKAQALYGKAKRLNTTGRIMIPFFCAGLLGFTAPELLGSGHSLIEYLT NEDVLLGTVLLVLAGRFLFSAVSFGSGAPGGIFFPLLVLGGYIGGAFATAGVQFFGLEPM YINNFVLLAMAGYFAAIVRAPLTGIILIFEMTGSLSQMMSLSMVSIVAYIVASLLRSKPI YESLLENLLKKQGEKVVQEHGQKILVNYVVRQGSRLEDVQISEISWPENCLLVAIQRGSQ EIIPKGRTKLLVGDTIVTMTDERDRAVVHDKMERLCSDMF >gi|224461045|gb|GG657759.1| GENE 1381 1434247 - 1435155 949 302 aa, chain - ## HITS:1 COG:no KEGG:Closa_3658 NR:ns ## KEGG: Closa_3658 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 298 1 320 326 124 28.0 4e-27 MKQKRSWIILGAILAALLILYAGLRIYNTNTAKREARETDKSTVYVTNETDAAEISYTGT AEEKTMEFVKNDGEWYYAPDREIPMDQSAVADLADTVTVCRAVRELKEPDALSDYGLDDP LYTISFKNAKGTETTLYIGQAAGEDYYAALKGDGKVYTVESTLVSALTFDLSGFVQTDTV PPISSGSLKKVEVTENGKTAVYDAKEDIAELAGGFGALSFTSCADYHAEEEKLKDYGLDG ESRVTVKAVYEDPDSGEEKEFTIYVGKTDDSGAWRYVGTDGSKIVYLVSADTVENTYTPA EQ >gi|224461045|gb|GG657759.1| GENE 1382 1435167 - 1436564 1409 465 aa, chain - ## HITS:1 COG:alr1621 KEGG:ns NR:ns ## COG: alr1621 COG3225 # Protein_GI_number: 17229113 # Func_class: N Cell motility # Function: ABC-type uncharacterized transport system involved in gliding motility, auxiliary component # Organism: Nostoc sp. PCC 7120 # 9 288 63 324 567 80 22.0 6e-15 MPDRIKKLFQSAASRNGSLSVGVIVLVTAIVIVVNLIAGQLPEKVKNIDISDNRIYEISD KSRNILKKLDKPVTFKVFAEKDKTDERIKTFIRKYTALSDQIKVEWIDPVLHPSELSANN ATADTVLISCKDTKKSTTVAFSDIIVSDESSYYMTGNVSESKFDGEGRFTSAVSYVTGDE VKKVYYTTGHGESTFSSSVSDLLDKNNMEEEELNLIMKNEIPDDCNLLFLYGPVSDITAE EKEIISSYLASGGKVFLLLGDAQDGTPNLDALMKEYGMERTDGYIADMQRSYQGNYYYIF PELSSSAGLTDGMASDMVMLVNAHGMSVTDPARDTITATPFMTTSADGYAVTEDSQKQGT YTLGAVSTESVSDGEEARFTVITADTLIDPQVTEAFSTLENLTLFTNAVSANFEDMENVA IEPKSLEVTYNTMRHAGVISMIVIFGIPAVILIYGFLRWMKRRKA >gi|224461045|gb|GG657759.1| GENE 1383 1436574 - 1437440 924 288 aa, chain - ## HITS:1 COG:PA4038 KEGG:ns NR:ns ## COG: PA4038 COG1277 # Protein_GI_number: 15599233 # Func_class: R General function prediction only # Function: ABC-type transport system involved in multi-copper enzyme maturation, permease component # Organism: Pseudomonas aeruginosa # 4 169 7 174 244 65 29.0 2e-10 MRAIYRRELQSFFHTMVGYVFIAFLVAFTGIYFMVFNLNYGYPYFSYVLSSIHFVFMIAV PVLTMRSFAEDRKNKTDQMLLTAPVGLWKIVLGKYLAMVSVFAVPCVIYLLFPLIIMTQG TAYIAVDYLSILVFFIIGCVYIAIGMFLSSLTESPVIAAISAFGVLLLFYLWSGLMDFLP GSAAGNAAGILILATVLVAGIYQMTKNWLIAAVLEAAAAAVCAVTGLAKPSLLEGFLASL LGRFSLTDALTGIAANSLLDVSSLILDVSLAGLFLFMTMQMIQKRRWS >gi|224461045|gb|GG657759.1| GENE 1384 1437424 - 1438407 1289 327 aa, chain - ## HITS:1 COG:sll0489 KEGG:ns NR:ns ## COG: sll0489 COG1131 # Protein_GI_number: 16331772 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Synechocystis # 8 313 1 309 342 238 43.0 1e-62 MLPGGKTLIEVKNLVKRYGKHLAVDGLSFRVGKGQVYGFLGPNGAGKSTTMNIMTGYIGA TEGEVLINGHDILREPEEAKKCIGYLPEQPPLYMEMTVREYLSFAGELKKIPKDKMEEQI EEVIELTKLREAENRLIHNLSKGYRQRVGLAQAILGFPEIIILDEPTVGLDPKQIIEIRE LIRRLAKKHTVILSSHILAEIREVCDYIMIISRGQLVASDTPANLENLMNRTAHIQIQVR GPQDRIKSILDSLDCIETADYSTGDDGVTAVQIQGREKEDIREKLFLAFAEENVPLLELR LVKSTLEEIFLELTQESGEVETDESDI >gi|224461045|gb|GG657759.1| GENE 1385 1438537 - 1438878 338 113 aa, chain - ## HITS:1 COG:no KEGG:Thit_1098 NR:ns ## KEGG: Thit_1098 # Name: not_defined # Def: sporulation transcriptional activator Spo0A # Organism: T.italicus # Pathway: Two-component system [PATH:tit02020] # 4 104 146 250 260 70 40.0 2e-11 MVQLQEKIKYILYQLGVNSTYLGYYYLTLAIAIAIEEEENLLYISKNIYPRIAEKYHTSV SCVERNIRTAADVMFRHGSPQLLAEIFIDNKNRPKNSKLISCLALYVKKQIAR >gi|224461045|gb|GG657759.1| GENE 1386 1439203 - 1440615 1514 470 aa, chain - ## HITS:1 COG:MJ0204 KEGG:ns NR:ns ## COG: MJ0204 COG0034 # Protein_GI_number: 15668376 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Methanococcus jannaschii # 1 408 1 425 471 185 31.0 1e-46 MGGFFGVASRTDCTLELFYGVDYHSHLGTRRGGMATYGENGFNRAIHNIENSPFRTKFER DVEEMEGNLGIGCISDFEPQPLLIQSHLGSFAITTVGKINNLDDLLELVYEDGHTHFQEM SGGKVNATELVASLICKKSSIVEGIRYVQEIIDGSMTLLLMTKDGLYAARDRFGRTPLVV GHKPDAFCVSFESFAYINLGYTDFKELGPAEIVFITPDGVETVGAPQEEMKICSFLWVYY GYPTSSYEGVNVEEMRYKCGSMLAKRDGDSVHPDVVAGVPDSGIAHAIGYANESGIPYAR PFIKYTPTWPRSFMPQNQSQRNLIARMKLIPVQALIENKKLLLIDDSIVRGTQLRETTEF LYHSGAKEVHVRPACPPLLYGCKYLNFSRSKSEMELITRRVIKEKEGEDCPQEVLDEYAD PCSCKYVEMVEAIRRQQNFTTLRYHRLDDLTASIGIEPCRLCTYCFDGKE >gi|224461045|gb|GG657759.1| GENE 1387 1440904 - 1442673 1512 589 aa, chain + ## HITS:1 COG:SP1434 KEGG:ns NR:ns ## COG: SP1434 COG1132 # Protein_GI_number: 15901286 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 9 588 8 583 586 337 34.0 6e-92 MKKQSNLSRLLSYAGHYKYLTYASWILSALSALTALIPFWYIFKIIQEVLETAPDFGSAK HMIHNGWMAVLSAVLALLIYIGALMCSHIAAFRIAANIRIEVMHHIAALPLGFTESFGSG RLRRTVNESSAATETYLAHQLPDKAGAIATPLGLLALLFLFDWRLGLMSIIPVLLGFLIM MSMTGSKMQHKMEEYQNALEDMSNEAVEYVRGIPVVKTFGQTVFSFKKFKDSIGRYEKWV VSYTKQLRLPMLFYTAAINSVFAFLTAAGLLFTRDGVTNDFLLNLLFYIIITPVISVTLT KIMFQSENAMIVDDALRRIDTVLDAEPLQETTAPKHPRDNSVDIQNVSYSYDGVKNALEH ATLHIGAGETAAFVGPSGGGKTTLANILTRFFDPQSGKVLIGGTDVRDMAKEDLMNTVSF VFQNSRLIKASILENVRMGRPDASRAEVMEALRAAQCTDIIEKLPNGADTVIGANGVYLS GGEQQRIAIARVMLKNTPVIILDEATAFADPDNEARVQAAFAELTKGKTVVMIAHRLSTV VNADKIYVLKDGRICEQGTCRELQEENGLFHRMWKDYQTSVQWKVAKEA >gi|224461045|gb|GG657759.1| GENE 1388 1442679 - 1444412 260 577 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 324 554 121 351 398 104 32 2e-20 MIKKLQKKLALSRQGAIDLIKGCAACMLQNISFMFPVGLLYMLVDDLLNGRTVADRAGLY AAGCVLCILLIFFTTWLQYNATYFATYKESGVRRISLAEKLRKIPLAFFGQKDLADLTST IMADCTFLEQSFSHFIPELFGSIGSTLLISVSLFVYDWRMALAALWVAPVSFAIVALSSR VQEQLSRRQMNAKMDCADGIQECIETLRDLRACNAEKNYLRGLDKKIKAVERRAIISELG TAVFVVSATLVLKLGIATTALTGSALLIGGNLDVMTFFMFLLVVSRLYDPLQSALQNLAA VIATRTNISRMNEILDHHVQSGREMLSNHGCDIEFSHVGFAYNSGETVLKDVSFTAKQGE ITALVGPSGGGKTTVSRLAARFWDIDRGTITVGGMDISRIDPEKLLSLYAIVFQDVTLFD NTIMENIRIGRKDATDEEVMAAARLANCDEFAHKLPDGYQSRIGENGCALSGGERQRISI ARAFLKNAPIILLDEATASLDVENETLIQSALSRLIRNKTVLVIAHRMRTVAGADKIVVL DNGKVAEEGAPEKLMKKNGVYSHMAKLQTYSQSWALE >gi|224461045|gb|GG657759.1| GENE 1389 1444518 - 1445642 1278 374 aa, chain - ## HITS:1 COG:TM0034 KEGG:ns NR:ns ## COG: TM0034 COG2768 # Protein_GI_number: 15642809 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S center protein # Organism: Thermotoga maritima # 4 374 3 352 357 352 49.0 7e-97 MDKSKVYYTNFKATANENLLQKLRRLCITAGMKEIDFEDKYAAIKIHFGEYGNLAFLRPN YAKVVADIVKEQGGKPFLTDCNTLYVGSRKNALDHIDTAYANGFSPFSTGCHVMIADGLK GTDEALVPVDGEYVKEAKIGQAVMDADIFITLTHFKGHESTGFGGALKNIGMGCGSRAGK MEMHNQGKPAVEQEYCVGCGACQRICAHDAPVITDGKAYIDLHKCVGCGRCIGACPKDAV HPTESNSNDVLNCKIAEYSKAVCQGRPCFHISLICDVSPNCDCHSENDVPIIPNVGMLAS YDPVALDVACADLCNSQPVLQNGSVLHENCKEHHEEAKCHDHFHMTHPDTNWKTGIAHAV KIGLGQEEYELVEI >gi|224461045|gb|GG657759.1| GENE 1390 1445986 - 1447032 1069 348 aa, chain - ## HITS:1 COG:lin2698 KEGG:ns NR:ns ## COG: lin2698 COG0392 # Protein_GI_number: 16801759 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Listeria innocua # 80 342 78 338 357 97 28.0 4e-20 MNNTMTIQKTGKQILMFLLILFLLFFCLMKGKDVGQIMDIAVSASFPSIALGLLMAGTFH VSEGLNLRILLRVMGHPVSFVQGMKYAYTGFFFSSITPSSTGGQPMQLYMMKRDGIELSH GSLALLMELAGFQTVVFLFEILAVILVPVMGIEVPVTVKILAAAGFVMNAVFVLFLVTVI FSEKMGKKLSRLIERLIPKLPFVKEEKKQEWVGKTEAGLEEFHTCALTMKQHKREIVKML FISTVQIVCWFGVPYMVYLALGYHGVPFIHLFLLQVLVYMAGALLPLPGAMGISEFVFIQ LFGGIYSGNSMTAAVLLSRGISFYFLLAFSGLMLLLIYTGKKMKRSRG >gi|224461045|gb|GG657759.1| GENE 1391 1447025 - 1447714 584 229 aa, chain - ## HITS:1 COG:BH1917 KEGG:ns NR:ns ## COG: BH1917 COG0726 # Protein_GI_number: 15614480 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus halodurans # 44 227 84 268 276 119 33.0 3e-27 MWMIAATAVLAIIVLSYSVFPSFALRYVQTWKRKRAGSGRVLYLTFDDGPGGSDTEALLD LLKKYEIKASFFTVAESAGKYPSLIARMKEEGHLIGLHSVHHNNALFRGNRFTYTDLAQS MFALQKLGCDAVYYRPPWGHLNLFTLGWLKRLNLRLIFWDVMAQDWSEKETADTICLKIM RRVFPGAVICLHDGRGAAGAPARTVDALRQALPMLLQEGYTFKRVDDNE >gi|224461045|gb|GG657759.1| GENE 1392 1447714 - 1448796 1134 360 aa, chain - ## HITS:1 COG:CAC2897 KEGG:ns NR:ns ## COG: CAC2897 COG0707 # Protein_GI_number: 15896150 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Clostridium acetobutylicum # 1 340 1 354 384 156 29.0 7e-38 MNVLILSSQFGMGHQMAAKAIGEEIKKQNEDARVTELDLLTYCYPRVSRYIFKLFHMLVE HCYGIYNMVYKLSGKMKVDIKPSGITVYKKLQKLMDEYEPDMIVCTLPLCAKSIASYIEK TGCRIPLVTCITDISIHPEWITPQTDAYLAPTNEVKESLVERGTAPENVFVTGIPVRQQF LENTGKQRDKVTKVLIMGGGLGIIPNLDELIDMLHHTPGVSATIITGKNQKAYDTWHGKY DDIEVLGYTENMSDHVKEADLVITKAGGITLFELIHCEVPLFVIHPFLEQEVNNARYAQE HGIARVIWDKTTDFTGILKEFLSDDRQWQEMKKNMRRVKREIMECSVEDAMRTVAERMAA >gi|224461045|gb|GG657759.1| GENE 1393 1449066 - 1451168 1876 700 aa, chain - ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 216 519 1035 1341 1734 105 30.0 4e-22 MKVEMRMKKRLGFVLCAALLFCGNVPAVAFAANDGCTHVHDGSCGYVSAVEGAPCGHVHD ESCGGLPVRGSVPTDYEDSGGAASNSDTGTPAVQAETAAAVTLPAATERDASADTFEAGG LGYKVLTSGADLRTVSLTGWGAGGAQATLAIPATVQDGGGNTYKVTEIAERAFAGGTAAT TLDITGAVNLVQIRNNAFNSWKNLTANGLDLSGLTSLTTIGSTAFYNCGFTGGLNLTDLT NLTTIGEYAFKNCGFTGGLDVSGLTNLTTIGESAFYNCGFTGGLDVSGLTNLTTIGGFAF YNCGFTGGLDLTSLKNLTTIGEFAFNNCGFTGGLDLTGLTNLTTIGGFAFNNCGFTGGLD LTGLTNLTTMGEYAFSDCGFSSARLPAQMTVIPPGLFSGCRNLAAAELPSGLTQIGVDAF SYCGFTGTLDLSGYARLTTISGGAFWGNAALTEVRLPAGLTSLGDRAFQECSSLTSLRFY GADAPAIGSYIFSAMAANATTGTVYYPFGGAGYSADAFDIGKDLAQFGRWTFTTFNATAP VLKAGTAVRTSDMAANVTFTSSRAGWYYYAVVDSGAARPAIDTTGKGPACGTGLQTIRLT TLSAGAQDIYIVVKDADGNVSDRGFKIPIPAFTIPGKGTAETGTADGAPHTRNITIKSDT VPQTGDPADILPWLVIIVAVLLGCATLAAYRKCRGTKRRE >gi|224461045|gb|GG657759.1| GENE 1394 1451168 - 1451374 104 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569999|ref|ZP_03779024.1| ## NR: gi|225569999|ref|ZP_03779024.1| hypothetical protein CLOHYLEM_06094 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06094 [Clostridium hylemonae DSM 15053] # 1 68 1 70 70 88 91.0 2e-16 MPVTQAQQVPLSALLYKASGEAAQKSGTIAPGSLSIPCEAAGARTVCIRAAAARSYAATK KGDLKEDK >gi|224461045|gb|GG657759.1| GENE 1395 1451714 - 1453201 1620 495 aa, chain - ## HITS:1 COG:CAC2961 KEGG:ns NR:ns ## COG: CAC2961 COG4468 # Protein_GI_number: 15896214 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Clostridium acetobutylicum # 1 495 1 497 497 553 53.0 1e-157 MLFENIKKLVEYGVETGLTPECERSYTTNLLLDLFCEDNYEDTECDLSDIVLEDVLKGLL DEACSRGLIEDSITCRDLFDTRIMNCLLPRPAQVQETFWKKYDISAKEAADYFYKFSQDS DYIRRYRVKKDMKWKADSPYGEIDITINLSKPEKDPKAIAAAGSAKASGYPKCLLCMENE GYAGHLNHPARENHRIIPVTINDSRWGFQYSPYVYYNEHCIVLNGQHTPMKIEKNTFVKL FDFVKLFPHYFLGSNADLPIVGGSILSHDHFQGGNYTFAMAKAPVETAVTIPGYEDVEAG IVKWPLSVLRIRGKDEKRLIALADHVLTAWRGYTDEDAFIFAETDGEPHNTITPIARKVG DTFELDLALRNNIMSEEHPLGVYHPHAQYHNIKKENIGLIEVMGLAVLPSRLKDEMEALA EHLVEGSDIEQDEKTAKHAAWAAAFKDKYEITRENVMDILKKEIGITFTRVLENAGVYKC TEEGRKAFLRFIHTL >gi|224461045|gb|GG657759.1| GENE 1396 1453231 - 1454463 1096 410 aa, chain - ## HITS:1 COG:FN2107 KEGG:ns NR:ns ## COG: FN2107 COG0153 # Protein_GI_number: 19705397 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Fusobacterium nucleatum # 17 404 1 389 389 427 54.0 1e-119 MTRRQESVREWGKERYMKEKLTEKFRELYGEGGDIRAYFAPGRVNLIGEHTDYNGGHVFP CALTIGTYGIARMREDRKLRFYSVNFDTMGVIETGLDELLPSEAAGWTNYPKGVMWAFEE RGYKLSHGLDLLIWGDIPNGSGLSSSASLEVLTGLILKDMYGFDVSMTEIALIGQYSENN FNGCNCGIMDQFASAMGKKDNAIFLDTNTLAYEYAPVVLTDARIVITNSKVKHSLVDSAY NDRRRESEEALMELKKVTDIKTLGDLTEQDFERYQSAIGDETRRRRAKHAVYENRRTIRA VEALRSGDIELFGRLMNESHLSQRDDYEVSCKEIDLLVELAWEVPGVIGSRITGGGFGGC TVSIVKRDAVDTFIETLGSGYRKQTGCEAEFYVVDIGDGAHRFRETVTKE >gi|224461045|gb|GG657759.1| GENE 1397 1454564 - 1455457 561 297 aa, chain + ## HITS:1 COG:BS_ydeC KEGG:ns NR:ns ## COG: BS_ydeC COG2207 # Protein_GI_number: 16077582 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 11 291 12 289 291 161 32.0 2e-39 MQLKIRPDQMEIKEHGNYSFPVYISEESINRFDSNSFLWHWHPEIELTWVMKGRIEYHVN DTCYILTEGNGLFANSNTLHSGYMTEKQDCDYLSVTFSPRFIYGYENSALHTKYVDFITS NPDWSSLLLSRETDWQRDILDEIRHIYALSKAPPADYELKVHIALCTVWQKLYRYYSTVP ADERQTSEALRRLRDILSYIQLHYNENIALEDIARSIGICKSECCRFFKKHMHMTLFEYV MYYRIQQSLPLLKAGESITKAAGVSGFSNPCYYGKIFRRYMECSPSQYRKLWRDSAV >gi|224461045|gb|GG657759.1| GENE 1398 1455446 - 1456324 732 292 aa, chain - ## HITS:1 COG:lin2658 KEGG:ns NR:ns ## COG: lin2658 COG1307 # Protein_GI_number: 16801719 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 4 282 5 278 283 124 30.0 3e-28 MPGVAVMTDSNCGFMQEDGEKYGISIIPMPIVIDGTTYYEGLDISQEQFYEKLSGGASVT SSQPSPGDVMDRWDRLLEKYDEIVYIPMSSGLSHSYECAAAFSQEYGDRVHVVDNHRISI TQAQSVLDARILVQQGRNGTEIKSILEREALDASIYIAVDTLEYLQKGGRVTPAGAAVGT VLNIKPVLTIQGDKLDAYAKARGMKSAFKTMCRALKGELAGRFRGLQEAGCLCAGIAGTY MEPALLEGWKAEFEREFPGLDVMYMPLTLSIGCHIGPGGLGVGIYRKHCLNG >gi|224461045|gb|GG657759.1| GENE 1399 1456468 - 1457085 472 205 aa, chain + ## HITS:1 COG:CAP0046 KEGG:ns NR:ns ## COG: CAP0046 COG1309 # Protein_GI_number: 15004750 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 63 5 67 188 62 42.0 4e-10 MEDRRVRKTKKNLKGTLIEMLADMPFEQISITELCRRADTSRITFYSHYSDKYALADDIF QDMIRIGTGNYIRRQAENNPGRDLVLGYCNVLDVILELYYANYDFFRHTLPEENPYLAFS FYNYVLETVEMHTDKEARILNFHLRYTAKKIAGFLCYGILGFINECHSEKETLEEIRGEA KEILKGLLRSDVLVSRETSPAQPPA >gi|224461045|gb|GG657759.1| GENE 1400 1457048 - 1458961 1655 637 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 226 631 345 754 776 166 29.0 9e-41 MSNWSLLTEFAALLLVIILLSSLAIYKKRITHSLKLFGTCLVLSGCSIVLNMICVILLKH RRLIPGGINVLANSLYFWLVVLLTSVTAMYIFEKMLEHVYDQYCIVRARRMLVSFVSLYT VLIFVNLKAGVLFWFDSGGNYHRGILNGAGYGVMLLEMMFLYICFFRHRSSVSREMKHAL KLFPPVVITLVAMQLINQGLLLNGIIVAFVDTILFISFFSQRRENDSVTGAGNRNAFYSE LAYRVAGKQKFQVLLVVPRDFGAINQRYGHQTGNEFLYAVVLWLEETYREAAVYRYIGVT FAVIFPYSDSALADRYARELEERFEQPWVIGQYEETITAAFGSMVHTGGDQEEDQMMELL DYLLSLAKHSGQKHIHFGREVKERFLRARMVADTVRRAVKEQLFEVWYQPVYSPEKGCYY SAEALVRLRDGEGGFLSPDEFIPVAEGIGVVSNIFWQVLGEVCRFIKRNPDLPVGTISVN MSMEQFEEPDLPRRIQRLLGAWDIAPQKIKFEITERVISEDAVQVQKVIHEMEEFGFRFY LDDFGIGYSNFASVAEYHFESIKLDKSLVGITEKAEKGYNIVCGLISLFHEMGMEVIAEG VETAGQSETLTSMGADKIQGFYYARPMPGAELVKFRG >gi|224461045|gb|GG657759.1| GENE 1401 1459065 - 1459436 426 123 aa, chain - ## HITS:1 COG:CAC0766 KEGG:ns NR:ns ## COG: CAC0766 COG0789 # Protein_GI_number: 15894053 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 117 1 117 126 132 56.0 2e-31 MTIKEVSERFDLSADTLRYYERIGLIPRVPRNKSGVRDYDEESCQWVQLIKCMRKAGVQI EALIEYVALYRQGDDTVDARRDILAEQRNRLIERMEDMQAALERLNGKIERYDQGLMRSS SGQ >gi|224461045|gb|GG657759.1| GENE 1402 1459472 - 1460008 485 178 aa, chain - ## HITS:1 COG:MA0418 KEGG:ns NR:ns ## COG: MA0418 COG0655 # Protein_GI_number: 20089311 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Methanosarcina acetivorans str.C2A # 2 178 3 179 179 249 66.0 2e-66 MKKVLLLSASPRKGGNSDILCDEFMRGAVEAGNKAEKIFLREKNINYCTGCGTCSFLGKP CPQKDDMAKILDKLIEADVIVMATPVYFYTMDAQMKTLIDRCCSRYTEMKEKEFYFIVTA AVDSIAQMERTVEGLRGFTVCLDSPRERGVIYGAGVWQAGEVKDKPAMQEAYDAGRNV >gi|224461045|gb|GG657759.1| GENE 1403 1460086 - 1460904 590 272 aa, chain - ## HITS:1 COG:CAC0775 KEGG:ns NR:ns ## COG: CAC0775 COG1606 # Protein_GI_number: 15894062 # Func_class: R General function prediction only # Function: ATP-utilizing enzymes of the PP-loop superfamily # Organism: Clostridium acetobutylicum # 4 272 3 266 271 207 40.0 2e-53 MEANNEKYVRLSHMLKEWTKEDVVVAFSGGADSALLLRAACDAALENGTDVYAVTVMTKL HPGSDLDTARRVAREMGALHRVLEIDELDEAGIKENPVDRCYRCKKSIFRKIRALAETLN VRCVLEGTNEDDLHEYRPGLKALKELRILSPLAQCHITKQEVRELARRRGVSVAERPASP CLATRLPYGTHITCDKLQMIERGEAYIREMGFYNVRLRLHGDIARIEVDAEALDGLFRRR EELTEQLKELGFTYITIDLEGFRSGSMDIKIS >gi|224461045|gb|GG657759.1| GENE 1404 1460888 - 1462180 947 430 aa, chain - ## HITS:1 COG:CAC0774 KEGG:ns NR:ns ## COG: CAC0774 COG1641 # Protein_GI_number: 15894061 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 8 424 3 417 420 266 39.0 6e-71 MEKQTGNILYLECCSGISGDMTAAALLDLGADRKVLEQALESLPVEGFRIKISRVKKAGL DVCDFDVVLDEAHQNHDHDMEYLHGHHGHVHRHSHDGEGGHSHAHAHVHRGLHEILHIIS HARMTDGAKETAEKIFRILADAEAKAHGVPVEEVHFHEVGAVDSIVDILSVAVCLDNLRV KECIVPVLYEGCGTIRCQHGILPVPVPAVANIVETYHLNLSLTESRGEFVTPTGAAIAAA VRTSEKLPASFAVRKTGMGAGKREYDRPGILRAMLIEDTSPSFESDCIWKLETNIDDCTG EALGYVMERLMEEGARDVNYMPVYMKKNRPAYQLNIICSEEDIPRLEQIVFEETTTIGIR RQRMERTVLERTVKTVHTSIGDAKVKMCRVGSNVRAYPEYESAAALGRACKRPYQEVYAL IMRECDGSKQ >gi|224461045|gb|GG657759.1| GENE 1405 1462182 - 1462925 952 247 aa, chain - ## HITS:1 COG:CAC0776 KEGG:ns NR:ns ## COG: CAC0776 COG1691 # Protein_GI_number: 15894063 # Func_class: R General function prediction only # Function: NCAIR mutase (PurE)-related proteins # Organism: Clostridium acetobutylicum # 2 244 5 248 248 243 48.0 2e-64 METHEILEQVKTGEITVEEAERYFRRKPFVDMGYAKLDTHREIRSGFPEVVFCSGKADEH LLHIFEVLFEENKEVFGTRASEAQYELVRERIPEITYDPVSRILKVEKEGKERKGKIAVC TAGTADIAVAEEAAQAAEFFGSSVERIYDVGVSGLHRLLARLETLQSANCVVAVAGMEGA LASVIGGLVDKPVIAVPTSVGYGANFKGLSALLTMINSCANGIATVNIDNGYGAGYMAAQ INRLGVR >gi|224461045|gb|GG657759.1| GENE 1406 1462929 - 1463681 335 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 19 241 141 366 398 133 36 3e-29 MKKIEIENLTFRYKSRDKGQTAPVLKEAAFFAEDGESVGIIGANGAGKSTLLKILVGLLP GYEGSVQVCGMDVVKENLSAIRRKAGYVFQDSDSQLFMNTVYEDVAFAPRNYGMSEEKVK ERTLEALRQTGIEELKDRHIYRLSGGQKKLAAIASVLSMGAEILLMDEPSAALDPGNRRK LIHILNELPAVRLIASHDLDFIYDTCGRTVLLSEGEIVRAGKTEEILKDEELLASHGLEL PLSFRFMKGV >gi|224461045|gb|GG657759.1| GENE 1407 1463701 - 1464504 913 267 aa, chain - ## HITS:1 COG:BMEI0637 KEGG:ns NR:ns ## COG: BMEI0637 COG0619 # Protein_GI_number: 17986920 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Brucella melitensis # 26 254 19 250 254 68 25.0 1e-11 MSRIDEAIRGIHYLDESAERDTWLCRIHPLAKVIVTVWYMVLVVSFGKYNLSGLAGMCLY PVILIILGDLSFKRAAGQLKYILLVVCMVGIANPFFDRAVLFYIGRIPVTGGVVSMLTLV LKAMFCVSASYLLAAATSIEKICCALRMLHVPKILVTLIMLIYRYVMLMLKEAERVTQAY SLRAPGEKGIRFKVWGTLAGQMLLRSMDRAELVYESMTLRGFTGEYRLSGMEGKHRGSIQ YALFWCAVLSVLRVFPLFETAGRMIGM >gi|224461045|gb|GG657759.1| GENE 1408 1464488 - 1465504 1138 338 aa, chain - ## HITS:1 COG:alr3947 KEGG:ns NR:ns ## COG: alr3947 COG0310 # Protein_GI_number: 17231439 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Nostoc sp. PCC 7120 # 1 317 1 293 306 122 35.0 9e-28 MHMADALITPAVAGTMYACSAAAAGGSLKKVRMEDEPGKIPAMGVMGAFVFAAQMINFTI PGTGSSGHLCGGVLLTAILGPYAGFLTMIGVLLIQCLMFADGGLLALGCNIWNMAFYGCF IGGFLIWKQMMKRGVSRGKIMFASIAACVLTLQLGAFSVTLETLASGVTELPFGVFAAAM QPIHLAIGLVEGAITAAVLLFVYEARPELIWTGEAGPGPIREGKLSYKKTMLVLAAAAAV TAGGISLLASAYPDGLEWSIERITGSAEIAASGQAHVLAERIQSATALLPDYMFRHSESA AGTSVAGIAGGAAVILVCVLSCYAFRFFRKKEKHEQDR >gi|224461045|gb|GG657759.1| GENE 1409 1465777 - 1466193 590 138 aa, chain - ## HITS:1 COG:no KEGG:Closa_1010 NR:ns ## KEGG: Closa_1010 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 137 1 130 134 121 53.0 1e-26 MENSKGMVIVVIDGQGGRVGSLFIERWKRQGRAQAEIIAVGTNSAATSAMLKAGADKAAT GENPVVVNARKADYIVGPIGIMAADALLGEVTAVMARAVAGSGARKLLIPVNSCGFYVAG VGDHTLSELVDDAVGMIG >gi|224461045|gb|GG657759.1| GENE 1410 1466314 - 1467453 1360 379 aa, chain - ## HITS:1 COG:CAC0767 KEGG:ns NR:ns ## COG: CAC0767 COG1453 # Protein_GI_number: 15894054 # Func_class: R General function prediction only # Function: Predicted oxidoreductases of the aldo/keto reductase family # Organism: Clostridium acetobutylicum # 14 368 6 366 376 275 40.0 1e-73 MIYKEFHDLKLSVLGLGTMRLPLRGDGPDAPIDEERAAEMFAYAIDHGINYFDTAYGYHD GESERVTGKLLSRYPRDSYYLATKFPGYDLSNMDKVEEIFEEQLEKCGVDYFDFYLFHNV YEKNIDPYLDEKYGIMEYLSKQKEAGRIRHLGFSAHGRYDTMKRFLDAYGGKMEFCQIQL NYLDWKLQDAKAKVELLNEYHIPIWVMEPLRGGKLAELSKENSDMLRGLRPKEGIPAWAF RFLQSVPGVTMILSGMSDMTQLKENIATCAEEKPLSEEEMKALMEVTDSMLDILPCTACR YCVAHCPKGLDIPTLLSLYNETRFVNGLITHMAVDAIPEEKRPSACIGCKSCEAVCPQQL EIAGAMSDFVRRLDAPAGL >gi|224461045|gb|GG657759.1| GENE 1411 1467581 - 1467853 203 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569317|ref|ZP_03778342.1| ## NR: gi|225569317|ref|ZP_03778342.1| hypothetical protein CLOHYLEM_05399 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05399 [Clostridium hylemonae DSM 15053] # 1 90 1 90 90 156 100.0 5e-37 MDTHLAKWTEEIPETIKKKKLFEKLIEIYPRNPHYYNHLARLLVEGSSNDYNPAIELLNK AIEILEEDERTLLKTGRVALSLTDSKTSRL >gi|224461045|gb|GG657759.1| GENE 1412 1468108 - 1469007 97 299 aa, chain + ## HITS:1 COG:no KEGG:SPCG_1125 NR:ns ## KEGG: SPCG_1125 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 293 2 303 312 142 32.0 1e-32 MMETYVAQSLNEYIELIAKIGSNGTEKWYRGQSNCEYRLTPSALRKVFAIEDQRGYKLNQ PILDDTCSGSNNVVAFLPVDRMVTEFSEKAKDCLEYDVSTRIEWECIAQHYGIPTRILDW TTNAINALFFAVGDCSIGQTKEDDIRHFFDSQGFGSGGGAVFVIDPLEINKKTVPIPDFD KNPIVFDSIKHAKILEECLHNMIPPVCFSGFNKEKRISRQAGKFTTTGTLVWPMDFYTEL QKRIIKIYIPYSAYESLRQQLCALGITHDTIYVEDDEKDVIAKAIAQETRNKFLKAMLK >gi|224461045|gb|GG657759.1| GENE 1413 1469141 - 1469995 468 284 aa, chain + ## HITS:1 COG:no KEGG:Dtox_3883 NR:ns ## KEGG: Dtox_3883 # Name: not_defined # Def: KilA domain-containing protein # Organism: D.acetoxidans # Pathway: not_defined # 1 279 5 286 290 358 63.0 1e-97 MAKNRIITVQNISIAVSAEELDDYICITNIAGAKSDQSRAADIIRNWLRNRATLEYLSVW EQLYNPNFKVFESEHFKKQAGLLTFTPSISEWVEQTRAIGLYVKRGKYGGTYAHKDIAFE FASAISPTFKLYLIKEFQRLKEEENDKKQIEWNAKRFLSKNNYLIQTDAVKNYLIPQNTY SENLEWLAYAEEADILNVALFGFTAKAWRDANPELAGKNNVRDYATVNELTVLSNLETHN AHMIREGKDKKERFNTLKEIAEYQLGILNTAEYIKTDDKNKSIT >gi|224461045|gb|GG657759.1| GENE 1414 1470112 - 1471422 1002 436 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 2 421 4 431 433 390 46.0 1e-108 METDITQELFTFIERSPSPYHTVGTAAEMLTAKGYERLEEQCTWELKKGGRYFVTRNLSS IIAFRIPEEACGGFHIMASHGDSPSFKIKEHPETVSDGKYVRLNVEKYGGMIMASWLDRP LSAAGRLLVRNGSAVTTRLVNADRDLLLIPNLAIHMNREVNEGYKYNPQKDMLPLYGEFT AKGTFMQLMAEAAGVSGDDILGSDLFLYNRMPGTVWGADDAFISSARLDDLQCAFASLKG FLTSYDSSCIPVLCILDNEEVGSTSKQGAASTFLRDTLRRICTASGKSEERYHTMLASSF MVSADNAHAVHPNQPDKTDETNRPYMNGGIVIKYSANQKYTTDAVSASIFKMICEKADVP YQSFLNRSDMAGGSTLGSIANTQTAMNTADIGLAQLAMHSPYETAGARDTEYLVRASRTF YESAVTCLGDGSYRVS >gi|224461045|gb|GG657759.1| GENE 1415 1471483 - 1472517 772 344 aa, chain + ## HITS:1 COG:no KEGG:Clole_4127 NR:ns ## KEGG: Clole_4127 # Name: not_defined # Def: ArsR family transcriptional regulator # Organism: C.lentocellum # Pathway: not_defined # 1 342 1 342 343 160 30.0 6e-38 MNITIKNELDPLFEIFSLLLLCHTQNWKEELVSQLDDYGVNGRAFFEEELNVFEKYVDTF QKYRITGREETALFEHVSYDTSLLILALAVEKRSCLEHPENLELQELRSLLAYFITDTGE HTRLPETAELPNLPDENALLDFMDTADVKDEEKWFVLNLLRKADYWLSCLFETVNANKKA YDKALEAVEKPLLRLIEQSSSCSDPEFLKIAGTCADAPLLRPTLAMPLIQIVLYKSGYFG LFTEALAANEASCRQSKDAVLRQLKALGDKSKLDILCALKDDHMYNLKLSEHLGLSPSTV SHHMNVLLGSGFITVEKKEGKVYYCLHREHISQFISALEHMLIS >gi|224461045|gb|GG657759.1| GENE 1416 1472713 - 1474344 201 543 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 306 540 257 498 563 82 29 1e-13 MKLYDKKGRLLLACTLFLGGISAVLSAFISILLQRIIDAAVNSDMAAFSSLFFTTLIYLG VLGAMGFLEAYCGKLIIRSITRSLRDHIFSGVMSRTPGCFSSRNTADYLSALVNDVKLVE ENHLIPFLLCAQMGVLFLTTLGILLYLSPLVTAVLFLFLVLMFTVPALLGKKMQRRQDAC SEKLADFTARAKDFLNGYEVIRAYSMRPYILKKFTRINQDTAEKKLHADTLLAVNESFSD VLSAVSILVIVFVSSYLLMKGQITAGTLLALIQLSGTFVTPVVMLMQNIPKITGIRPVLE HLEEFSLTYQEAAEEEDLPAPAGLKKGITCSNVTFGYTPEQPVLKDISFTVTPGMKCALL GESGGGKTTLIRLLTGYYTDFEGDICYDGVSVKDLSPDRLNRLAAVIHQNIFLFDTDICE NICLGSTFSKDRLDHAVKASGIWQFLPSLDNGLHTRTGEDGRNLSGGQRQRIAVARALIR STPVIILDEGTSAIDRETAHEIEAGLLAQKELTVITITHHMDESLLDCYDKVYCLKDGRL SIA >gi|224461045|gb|GG657759.1| GENE 1417 1474374 - 1475417 521 347 aa, chain - ## HITS:1 COG:CAC0654 KEGG:ns NR:ns ## COG: CAC0654 COG0642 # Protein_GI_number: 15893942 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 129 344 292 510 513 102 31.0 2e-21 MSGIKKQTWFMIAGYTILLSLSIIACFYLFVRNSGADISGLPETLFYAPQSGQIVLDSSI TSTELHDYFRSAFFRYLPLLIAGVCLLVLLFSCGLLFCIRVLERRHNRIIASDLRELSES EPERIREMDLKEEYQNIHTRLSSYEKDQQRLHSFIAHGQKNLIMLIKARLNETSDPLLIR DIEKLAQSVDDILTISAHRDASREMVDLALIAAEECDTYRSVYSNLSFCFDEDASYEILG KEQWLRRAVDNLLDNAVKYGDGSLIEVTLEQQHNSVLLRIRDHGMGMSEEEAELVFEHGY QIRELNKNGYGIGLSLVRHVCNLCDGFVRVTSRAGQGSEFVLAFPSA >gi|224461045|gb|GG657759.1| GENE 1418 1475405 - 1476073 415 222 aa, chain - ## HITS:1 COG:CAC0653 KEGG:ns NR:ns ## COG: CAC0653 COG0745 # Protein_GI_number: 15893941 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 220 1 221 221 195 45.0 6e-50 MRLLIIEDNTELADLMKGKLSGFGYVCDVAYDGESGDLKASDNDYDVILLDLNLPDRDGF ELLENWRSQGISAPVFIVTARGELEQRVKGLQLGSDDYITKPFEFTELDARIQAVIRRFR GRANPVILIEELSLDPATRRVTLDGREVPLSAKEFDILEYLASCYPRIVSNEELAEHVYD ENFDPFSGVIRVHMANIKKKLKMGDTSILRNEKGKGYYLCLE >gi|224461045|gb|GG657759.1| GENE 1419 1476241 - 1477617 1295 458 aa, chain + ## HITS:1 COG:BS_yclI KEGG:ns NR:ns ## COG: BS_yclI COG0577 # Protein_GI_number: 16077442 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 1 386 1 406 486 110 24.0 5e-24 MYILKNAFQNLYRNAGRNLLTAGIFLLVITMSCVALVIYNDADAIAKQYRERLSTEVLLN VDEKKVSEAWEKDETFRKPELTDELIQKMAASKYLKKAMYSTQMEAVADNLKYTTPTDYQ DMEIQRAGEDPAKTRIPQYTLSGYEDVSQAEPFRNGQAKLAEGGTFPAADNECLVSDTLA ELNGLKPGDTFPAKSIYYTDKQGGPLEEMTLKVSGIYHRKYSEGETDSDNEIFTRYKLLT DPRYTYEPTFNTDFYLKNPQDLHAFAQEAYASGLSEYYSLSTDTVAYDAFVRPIEQMCVI SMIFLWVVLALGAAILLILSSLLVRERKYEIGVLRAMGMKKSKVAAQLVLESALTMAVCL ILGIALGSLLAQPVTDMLLADQMSRALSGPTLAGGMGGTSFGGLATDNRPVTHISAALNL TAISELTAIAFILTAAAGAVSAACAMKYEPMRILRHRN >gi|224461045|gb|GG657759.1| GENE 1420 1477634 - 1478320 259 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 3 198 4 199 223 104 34 2e-20 MSVLSLKNVGYTYEKTTKPVFQGLNADFEPGKVYCIVGKSGAGKTSLLSLLAGLDTCNEG TILYEGEDLRKLDRDQYRARKIGVVFQSYNLLLNKTALENIELSMAISGVRHKNNRAFAL TLLENVGIDEETARRRVLGLSGGEQQRVGIARALSHEPNLLLADEPSGNLDRETERDVMN ILADLAHVQNKCVIIVTHSHKITRCADEIWGLNKGGRLVYMGKGGEAR >gi|224461045|gb|GG657759.1| GENE 1421 1478317 - 1478463 239 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569327|ref|ZP_03778352.1| ## NR: gi|225569327|ref|ZP_03778352.1| hypothetical protein CLOHYLEM_05409 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05409 [Clostridium hylemonae DSM 15053] # 1 48 1 48 48 75 100.0 1e-12 MTERRRQYIGIACLVLGLAFVGLGLLREEHLTVLKKAAAICVECIGIG >gi|224461045|gb|GG657759.1| GENE 1422 1478473 - 1479411 586 312 aa, chain + ## HITS:1 COG:MJ0749 KEGG:ns NR:ns ## COG: MJ0749 COG0348 # Protein_GI_number: 15668930 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Methanococcus jannaschii # 95 283 77 235 246 94 32.0 2e-19 MNNKKRTINKQQKKGIRLWVQIIFAALTNGYVNGFIQSKIYTGPTKALCVPGLNCYSCPG ALGACPIGSLQAVISSRSYQFSFYIIGFLMAVGALSGRVVCGFLCPFGLVQDLLHKIPVP KLKKLPGEKYLKYLKYVILAVFVLLLPMFAVNIIGQGNPWFCKWICPSGTLLGGIPLTLG NPDLQAAIGRLFDWKVFLMVSILVFSMFAYRPFCRFLCPLGAVYGVFNPVSLYHLHLDED KCVNCGICKKTCKMGIDPRETPNSIECIRCGDCVRACPAGALTKGFGIGRKPEAACSDSC ASCSKSCGGKSV >gi|224461045|gb|GG657759.1| GENE 1423 1479465 - 1480715 1088 416 aa, chain + ## HITS:1 COG:FN2067 KEGG:ns NR:ns ## COG: FN2067 COG0526 # Protein_GI_number: 19705357 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 287 413 37 162 164 60 31.0 9e-09 MKKIMTFILALCLTVSLAACSSPSASSSSRSTSGGGKSPAKDVKDIVKEDSVSDEEQELM DRSVRFTKDKLLSYDTWKKVMELPGVDCPNHISGYIDDVSMGDTKDLRLSGEPELDENGL FVTYELTEGKVPADGSAGGCVIPEALAKSMGKKVGDKVTVDTALGRAEYEITGLYGYSEK GKVGGLTEENSPLYEIFVTPEDIVKLTGTKKDGYFLGDTVTCATAKEAKELVKQASAILK DHGAKAMLASDSSADLSYADSDELFQNVALDGTDLNGKALPKDLLAKDGITMVNVWATFC NPCLAEMPHLEELNKEFAAAGKNFKVVGIAADVINDKGKVSQEQLDLAKEIVKKTGVTYT NIIPGEKLQSDILPNVTAFPTSFFLNDKGEVIKTVMGATTKEDWVNTTNELLKNLK >gi|224461045|gb|GG657759.1| GENE 1424 1480814 - 1481275 434 153 aa, chain + ## HITS:1 COG:ECs3169 KEGG:ns NR:ns ## COG: ECs3169 COG1905 # Protein_GI_number: 15832423 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Escherichia coli O157:H7 # 25 152 37 165 166 72 33.0 2e-13 MKKEWNDIFDYYREEKTMTQSELVIAVLTELQAIEGCIPKEAREAAAELAGVNPGYVSAV IKRLPHLHEQSFRHEIKVCISDRCKNKGGQDVLKEIQRILKIRPGQVTRDKRFLLTTVYC MHYCTKGPNIQIDGRLFQNVTAAEVPSILKKYS >gi|224461045|gb|GG657759.1| GENE 1425 1481298 - 1482041 533 247 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 4 216 6 272 302 154 34.0 1e-37 MSGGYVMNIQNFSVNDGEGIRTNIFLAGCPLACAWCSNPEGQSLHNAMTSCMTVEEVVDK VKKQMIFYRISGGGVTFSGGEATVQQEFLRRLSYRLYDMGISLAIETCGQFEYEVVKDIF GKMDLIFYDIKHMDDRKHRAFTGVSNEKILSNVPKVAGLGVPMVVRIPVIHGVNTGDGNL ESTFEFIKREAPRARLELLPYHTYGAGKYEELGLLPPPDSFKTPGDDEIEAWYEMARTYG IDSISYK >gi|224461045|gb|GG657759.1| GENE 1426 1482067 - 1484436 2458 789 aa, chain - ## HITS:1 COG:SPy2049 KEGG:ns NR:ns ## COG: SPy2049 COG1882 # Protein_GI_number: 15675819 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pyogenes M1 GAS # 2 786 12 803 805 434 35.0 1e-121 MITDRIEKIRQNYVNAKPAISYERAYLWTESHKKTEGMHVAVRRAQAFYDTCDKLTVHIF DGELIVGAVGEFRKCGILTPEFSWLWVDKEMDGFDKRPQDPYVMTDEQRAFVREKIFPYW KDKSLEEAFLARVPEETYKIGVDTGVIDNDSKWRQAVGEVTPDYQDVLFVKGFGGIIREA REKMAELDETVPEDMDKITFYQSVILTSEGIIRFANRYADEAERMAGEQKDEKRKEELLG IAANCRRVPEFPPETFYEAIQFVWFTQIGGILSENPLSLNPGRFDQYMNPYYEADKAKGI LTEDTAQELIEALWLKYSEWVWTISANTADYFAGYNQFQNLTVGGKTREGLDATNDITYM ALKATEEVKTHQPGLSVRIHADCPQEFLGAVTHLVSKGTGFPAIHNDSVGYQMLLNAGYE PDDARDWNNCGCVVPHYRKTGEWTAAVNVNFGCALEYALNEGKSRMTGEKMGLSEKPCRE FASYEEVKEAFFRQFENLCRHSIIATVTAQKLHQEMVPRPFLSSCIEACMENGKDLSNGG AKYNVGPVITGIGLAVVANSLAVIKKLIFEDKVATMEELDKALAADWEGYEELRKKAQDV PKYGNDDDYVDKIAIEIANWYYREIHQYKDVFGSPFNTAFMGISNYIPMGRVLGATPCGR KNGEPSSEGVSPYVGSDTSTPLAAMRSAAKVNQEIHSGGTLLNLRLNHDLVATKRGQANL GAMIQSFFALGAFHVQFNTLSSKILRDAQARPQEYKDLLVRVAGYSTQFVNLSRSMQDAI IARTEHAEF >gi|224461045|gb|GG657759.1| GENE 1427 1484572 - 1485264 516 230 aa, chain - ## HITS:1 COG:PAB1316 KEGG:ns NR:ns ## COG: PAB1316 COG1011 # Protein_GI_number: 14521777 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Pyrococcus abyssi # 1 199 1 204 229 68 25.0 1e-11 MLKAVFVDYTGTIIKEEGPDIREVIRRTYENSDIESPQAMVAYWWRLLNEYEEKSFGNSY MSEDDIVEELLKICEKEIHLKENPKELHAAFQRFWMYAPAYEDTAAFFKECPLPIYIISN NAGKYIEESMRDKDLHPAGIISSDMVRAYKPHRAVFEKALEVSGCSADEVIHIGDSVSSD VEGAKAANIQPVLVDRGGKSSLEGVLTVKSLTDIIPLINAWPADRGQYNK >gi|224461045|gb|GG657759.1| GENE 1428 1485313 - 1485825 626 170 aa, chain - ## HITS:1 COG:CAC2751 KEGG:ns NR:ns ## COG: CAC2751 COG0454 # Protein_GI_number: 15896008 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 170 1 167 167 103 30.0 1e-22 MEFITARYEHVDRMCEITGMAKRQLKDLGLDQWQKGYPSRDVWLDDIRIGCTFLAVEGEE ILGIFAFQKDPDPSYAVIDGSWLTDGPYASMHRVCVSDECKGKGVAGKMFAHGFRLAREA GLSSVRIDTHPGNIPMQRALEKAGFVKCGSIVLAEGCEAGDDRIAFERMI >gi|224461045|gb|GG657759.1| GENE 1429 1485900 - 1486619 867 239 aa, chain - ## HITS:1 COG:FN0219 KEGG:ns NR:ns ## COG: FN0219 COG3279 # Protein_GI_number: 19703564 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Fusobacterium nucleatum # 3 237 2 238 240 146 33.0 4e-35 MAIRIAVIDDERPARSELRHQLGELVPEAVIEEGDCGAAALELAGSGRFDLFFLDINLGD INGTVLVNALKNMQQDAKIIFVTAYSEYAVKAFELGVDDYILKPFDRGRLKKVLERVRPS APRETEKVNLRKIAISNDGKTIFEDIGNIVYIETHNRGCIIHAGESDYFDGKSIGEFEKR LEGERFFRCHKSYLINLDKVREVFPWGNNSLGLKMQGFEEDILSVGREKTKVLRQLLGW >gi|224461045|gb|GG657759.1| GENE 1430 1486622 - 1488307 1463 561 aa, chain - ## HITS:1 COG:BS_lytS KEGG:ns NR:ns ## COG: BS_lytS COG3275 # Protein_GI_number: 16079945 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Bacillus subtilis # 5 546 3 564 593 235 28.0 2e-61 MQTDNLIFQLILNIGLLVLVANLLSKLKIIQNIIQQERRSFKSQVLLALVFGGIIVLSTY TGIDIGSYSLNTRVIGAMTSGILGGPIVGLYASFIGAVYVYFFSEPQMFAMASAFSTVLF GLLGGGFYPYFQRGKWKYRDLFLLACFAEFCDMIALLRLASPFADALNTVLEIAVPMIVL NSIGILIFISSFNNVFIQQDIESSRQLQQASELTQKCLPLLRHGISKGENMHELASVILS ETDWMGVMITDRTAILEWQQEGEEFQPGDLTSIPRVGKNAMQTGSLSTMYNVPRSSSWYE WMKEYSMIAAPFVIKGKSVGCLIVWMKKRWVFRKSELELLQHLVTLGSFQIAMAELEHQE IMRQQAELKALQFQVNPHFLFNALNTISCVCREDAQRARELLVILANYFRYNLDGSAGMV PMGEEISHVKDYLELEKGRFEDKLIVTYDVPRKMDILIPTLILQPVVENAVKYGINREGK RIVNISVKEMEEEFIVRISDKGKGFPAEVADMLEKGDTVGRSIGLSNVYKRMKSTYGEDG RIKISSSGDGSCVELCFKKGR >gi|224461045|gb|GG657759.1| GENE 1431 1488481 - 1489734 1382 417 aa, chain - ## HITS:1 COG:RP176 KEGG:ns NR:ns ## COG: RP176 COG1301 # Protein_GI_number: 15604051 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Rickettsia prowazekii # 11 409 1 397 399 162 28.0 1e-39 MKVEKKKKISISLTTQILIATIGGIIFGAVVGPWASNIKFIGDIFIRLIQMSVILLVMSA VAAAVGSGDGQDVGKMGFHTFKWIILFTIISASLGIALSMLIQPGVGIQIANAEDIANAA VESTSLQDTVLGFVSTNIIGSMADSAMVPCIVFALFFGVAMGAYTRQSGNRNMADWVTGL NAIITNIIKTVMHIAPVGIFCLLADVAGSTGFKVIIPMLKFLGVLLIGDIVQFLIYGPLT ATLCKVNPARMPKKFAKMSMMAVTTTSGAICLPTKMEDAVTKFGVSRKVADFTGPITMSM NSCGAAMCYVVAIFFMAQSTGVDLTVYQMGMAILLSCLMCMGTIVVPGGSVIVFTFLASS LGLPLESIAILIGIDWFSGMFRTLMNVDVDVMVGMLVASKLGELDRDVYNGVKEVTY >gi|224461045|gb|GG657759.1| GENE 1432 1489973 - 1490602 693 209 aa, chain - ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 203 3 205 210 90 29.0 2e-18 MNKNELVNFLRQLKNTMEDNREYLIGLDSIVGDGDLGLTMSDGFRAAYEAVKDLEETDAG RMCYTAGKVMAEKVPSTMGTLMASGLIEAGKELRDTEEMKDAAWIIFFKAYETGVCKRGH AKVGDKTFLDAFHPACEVLESQLDQGAPLEEAARKASAAAEKGFHATAALTAVHGRAAAH RERSGQTEDAGAAVAMLMVRAFADSMTAS >gi|224461045|gb|GG657759.1| GENE 1433 1490615 - 1491625 1156 336 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 333 6 334 337 329 52.0 5e-90 MKKIINQPEDYIKEMLEGIYTAHSDKLAYVEDDMHCLVKRKRKQGKVGIATGGGSGHLPL FLGYVGEGMADGCSVGDVFQSPGANQMLAVTRAVDTGAGVLYIYGNYNGDIFNFDMAAEM ADFEHDIRVESVIAGEDVASAAPSKPGEKSTRRGVAGIFFVYKCAGAAAEAMLPLDEVKR IAQKAADNVRTMGVALTPCTVPRVGRPGFHIADDEMEIGMGIHGETGIRRGRLETADKIT EEMLGKIIEDLPYVEGDEVAVLVNGLGATPLDEQYIVVRRADALLKEKGLKVHRYYVGEY ATSLEMAGVSVSLLKVDEELKKYIDAPADTPFFIQK >gi|224461045|gb|GG657759.1| GENE 1434 1491638 - 1492597 1222 319 aa, chain - ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 314 5 314 317 278 44.0 1e-74 MGKILITASHYEELCKGAKQLLEESGHELIINKSDMPYYTYEQIAQVIGDVDGAIIGLDD WTEEIYKIAPKLKVIAKFGVGTDNIDKIKAREYGIKVINAPGQNSNAVAELTVGLMIGVL RGLIPLHKKMENGEWVRRVGYEIKGKTIGLLGFGAIARLVAEKLMNFGAEVIASDLYPDA ELASRCNVTMVSQKEVMTKSDLVSIHIPATGETHHLFDDAAFRMMKKGAYLINCARGSII DTGALCRALKDGRIAGAALDAFEAEPLMKDAEILKCGNVICTPHTGAETYEAYTNVSMCT AQGVIDVLEGREPQFCTNR >gi|224461045|gb|GG657759.1| GENE 1435 1492616 - 1493533 932 305 aa, chain - ## HITS:1 COG:aq_1143 KEGG:ns NR:ns ## COG: aq_1143 COG0329 # Protein_GI_number: 15606400 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Aquifex aeolicus # 6 292 4 287 294 162 34.0 1e-39 MKKLYGVTAAMVTPFKESGEVDYDGVRQLTGMLIDKGVNCLYPCGTTGEMFRLSLEEREK IAETIIQTAAGRVTVFIHCGAMNEQDTIRLLGHAEKAGADGAGIVTPAFFGATDRELEEY YVTAAQSVSDSFPIYLYNIPQCSANDISRETAEKITARCENIIGIKYSFADINRTVDYLN LKDGSFSVLHGCDRAFTSMLALGCDGTVSGIAGVFPEPFVRVYKAFCEGDLETAKKLQKI CVKYCDALKCGSNMSYFKEGLKMRGISAGVMRKPQLDIEEAEIERLRKELKKISREAGVE IDTTA >gi|224461045|gb|GG657759.1| GENE 1436 1493552 - 1494493 1135 313 aa, chain - ## HITS:1 COG:AGl989 KEGG:ns NR:ns ## COG: AGl989 COG1172 # Protein_GI_number: 15890611 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 309 6 317 322 157 36.0 2e-38 MKLKVQRHQTLIISYLTALVLFAAISVYKPGFASIDHIRVLCSEAAIIGVVAIGQTFVII TGGIDLSVAWMVGIAAIMITNVTKGLDESLAWAVPFILVLTTCFGLVNGICIAYLNMPPI VMTLGMNTVLQGGLVAVTQGAPGGAAPAFIKKMGQSSFLGIPYLIIIWAVLAAVVTVLLF KMKYGRELFAVGNNATVAAYSGINVRRVTLTAYAVSGLTAGIAGMLLAGKVGQSYLGIGD NFQFQSIAAVAIGGTSLMGGNGNYLGTVAGAFTITIILGILAALNLPFGVQKMAYGIVVL ASVLMSVRKGLRK >gi|224461045|gb|GG657759.1| GENE 1437 1494493 - 1495461 1073 322 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 5 310 19 327 330 144 35.0 3e-34 MSVIKHKKYKKNPALVSVLLFFFLAALTCILQTEAMSVDWISLKAEASMTLILAAVGETM VLLIGGIDLSIAGVISLTNSFSAIYMLDSGVSIITVSILCILIGLSVGLFNGFVIQKFQV QPFIVTFSTWFICGGIAYLVLPKDGGKPPASFADAMVTKIGGKVSVAVLFILLLAAAWFY FKKTRLGIYVYAVGSNDKAASLNGINVFRVKLFAYAASGVFAALAGVYRTAVVTSGSPTA GESFFNQAIAASVIGGTLLTGGKGGVIGTIFGALVLKMIADILVFAGVSSYWSTLFQGLL LIIAVLISTVSEIVKDRKEMLA >gi|224461045|gb|GG657759.1| GENE 1438 1495480 - 1495914 533 144 aa, chain - ## HITS:1 COG:BMEI1392 KEGG:ns NR:ns ## COG: BMEI1392 COG1129 # Protein_GI_number: 17987675 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Brucella melitensis # 1 144 376 519 522 119 40.0 2e-27 MAALDRVVKGIFISERKEKEIVDEMMKTFAIKAESPETLAGTLSGGNQQKVVLGKQLATK PDILLMFDITRGVDVGTKKEMFNVIKQYAREGKGILFYSTDMEELVNVCNSIVVMNQGKI AGRIDRELISRENILRVSVGEKAN >gi|224461045|gb|GG657759.1| GENE 1439 1495901 - 1496974 706 357 aa, chain - ## HITS:1 COG:RSc1242 KEGG:ns NR:ns ## COG: RSc1242 COG1129 # Protein_GI_number: 17545961 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Ralstonia solanacearum # 4 320 29 344 518 241 40.0 2e-63 MADFEMRNITKSFPGVKALDNAGFEADKGEIVALLGENGAGKSTLIKVLCGEHKADSGEI YFEGKRLEIHGTKSAIKQGICAVYQELSLIPDLTVAENLFLGVYETSASKRVSYQELEKK TIELFHRYEADVIDPWAKVSTLPLPKRQMLEILKALSKDGKIIIFDEATSALSDGQAAWL MNIIRKLAEEGKIIIFISHRLDEIKSLCTKVIVYRSGTDVADLPMEKADSDQLVTLMLGR EIGGYYPKKECFTKDEILVSMKNVSSGHKLKEIDLDVRAGEILGVGGLAGQGQAELFMAL FGLIKTTGAISIKGREVQLKKSEGMYPGRDRAHTRGPRPAGPCSGSEHTREYRNGGA >gi|224461045|gb|GG657759.1| GENE 1440 1496961 - 1497089 115 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQMVQRQSTFAPFVSEYKAAPVIAVHAITAGTGERGEQYGRF >gi|224461045|gb|GG657759.1| GENE 1441 1497100 - 1498239 1596 379 aa, chain - ## HITS:1 COG:SMb20018 KEGG:ns NR:ns ## COG: SMb20018 COG1879 # Protein_GI_number: 16263769 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 54 316 23 287 340 110 30.0 5e-24 MKKKLVSILLCAALVGTMLMGCQSNQETSSDSGKEEAAKVDTSEDMTSLVKKEGKKYKIA LSNSYMGNDWRQQMERIVEYTAEQEPYKSRCELKIVNCENSPEDQAASIDALVKEGYDAI LVDPASETALNQALKRATDAGIEVILFDQPASEESAYHITIDAVKAYKVMAKWLAEAVGG KGNVVLDQGLPGAAVSEQEYNAAKEIFDSYPDMKIVSDFISNYAEADGEAALSSVIAANS DIDVVVTQGYMTSVTNAFKKAGIDKIPASCGGGYNGNLLTCLENDSQGIIHVYIPGISAI ALNYAIRILDGEEIDKNISIDPAYVATSNEFDMGEFSDVAIEVAEDGVNCFSDQPDNLQW PVVPGNFGVEIPMDVVLGK >gi|224461045|gb|GG657759.1| GENE 1442 1498328 - 1499488 974 386 aa, chain - ## HITS:1 COG:lin1613 KEGG:ns NR:ns ## COG: lin1613 COG0006 # Protein_GI_number: 16800681 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Listeria innocua # 86 382 72 357 365 108 28.0 1e-23 MDRMKKVTDELKKAGADLAVLISPSNVTYAGDYEVPYWPAFMGDMCRGLPMAAACIGAES GVLWNVISDFYKSRLERAGKKQVICYPSFSHIERHDPAQNFKKALLDAVRRCIGTAGRIT VGVEEEHCPQVVLEILREAYPDAAFVNISGSMERARYIKTPEEIALLERAARVADAAQER LYEISRKEGDYTELDIWFEVQKAVSGENKSLTPFVGELVSGPRAGLSDYPLGPSDRKVER GDIAIMDISPRVEGYWADCSNAVVFWEEPDEEQRRYFSAVKDVYDIGREAVYPGVTFREV NLKMEEAYKKNGFRMCSYQGHQIGASVNEKPRFTYHDNAVLEENMVVCIEPQLYTGPSGK TGVRLERMLHVTKDGARELNHFRWGM >gi|224461045|gb|GG657759.1| GENE 1443 1499792 - 1501714 1502 640 aa, chain + ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 331 625 2 301 308 172 34.0 2e-42 MNIRDIAAAANVSVSTVSKVLNQKDRDISEATRERVLAVIKEYNYTPYSNIRETQAGKSF TVALVIHPSLIKRKLITTLEQHLAVSGYSLLLCTLDTSDFSMARQLNVLRSKRVEGIIFH AIDERYIEAFNKGNSSGIPTVFLNQEPVTNKISIRCDYSSIAYAAVKLLINHGHSRIGCV LDSASDNSGAAKDGYLRALFENSLPRDDTLVISCKSDAHNTHATYEQLFEQDITALFCQN AVLAASAYTFLHEMNISIPDEVSIVCGETNELAQILYPPVTSVELPYDTLGRLATRTILD LIETHAELPRSLTVEPVIHKGDSLALPGASRTKIAVIGNMNMDTIISTDKIPSPGELIIS NNIFSTPGGKGINQAIGAGKLGGFVYAIGRLGDDSEGHIISDTLSSYNIKTEGIYIDNST STGKAFITVPDGSNSCVISYPGANAFFDVEQLNKCTHLLTNTDYCLISTELSPEVVAYAI KRCKKLNVKIFLKPATTSKIERTLLSKIDYLVPNETELEQLVPGPETIPEKAEELFKLCK NTIIVTMGAKGCYLKSSEYSHFFPAAPFSPVDTTGAANCFISALAVSLGEGNDLPYSICF AAYAAGLSVTQQGTQLSFPSRAQLDIYQDDIHAMYVESGL >gi|224461045|gb|GG657759.1| GENE 1444 1501786 - 1502547 580 253 aa, chain - ## HITS:1 COG:MTH933 KEGG:ns NR:ns ## COG: MTH933 COG0778 # Protein_GI_number: 15678953 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Methanothermobacter thermautotrophicus # 5 229 4 220 243 85 28.0 1e-16 MDDLLYEMIFKRRSFHVFRGAEGEAITLEELQHIQKKFKQFIPLDKDIKIDMQICSAGHT TCKRGQEYCLLLYSEKKDNYLQNIGYVGEQLDLYLASLNIGALWFGIGKADEPEKDNMEF VIMIAVQKVRENKFRKDMFKSKRKPVEEIWDGPYIGNAAGIARFAPSACNTQPWLVENRE GCLLVFRYRKPGRRGIMPAHKVTYYNRIDMGIFLLFLELCLRHEKIQFERELFYDEGGEE RETLTAKYKYLKA >gi|224461045|gb|GG657759.1| GENE 1445 1502667 - 1503050 178 127 aa, chain - ## HITS:1 COG:no KEGG:CD1006 NR:ns ## KEGG: CD1006 # Name: not_defined # Def: acetyltransferase # Organism: C.difficile # Pathway: not_defined # 1 126 1 126 129 225 84.0 5e-58 MIEYEVNDQKLNASVFISFVNRVWPGDYDVDKTQAALSKTLNISAYDDKMLVGCLRVLTD GYYFGTITELLVLPEYQKQGIGSSLLQLARKNTPTMLYFGAQPGAEEFYEKNGCQKGLQS YIIAKKR >gi|224461045|gb|GG657759.1| GENE 1446 1503103 - 1503492 425 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569354|ref|ZP_03778379.1| ## NR: gi|225569354|ref|ZP_03778379.1| hypothetical protein CLOHYLEM_05436 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05436 [Clostridium hylemonae DSM 15053] # 13 129 1 117 117 216 100.0 4e-55 MDKKDSVKKYTTMYMSLGMCFGVSIGLVFGQIIYTDNMSMGLCFGIPLGMCIGMAVGSAK DKRLSENMMKVSRIETIKDSSDIVIYAIDKNGAEKEYRVTETKMKEEKFSVDDRIAEETD GFPVSLENK >gi|224461045|gb|GG657759.1| GENE 1447 1503823 - 1503915 202 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDFEMLSIVLMILAIIVTILVAYINHTKK >gi|224461045|gb|GG657759.1| GENE 1448 1504843 - 1506051 870 402 aa, chain - ## HITS:1 COG:BH1812 KEGG:ns NR:ns ## COG: BH1812 COG4552 # Protein_GI_number: 15614375 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Bacillus halodurans # 12 402 9 386 386 171 30.0 3e-42 MIKRKLKMRSVDSRYLEQYNALLRYVFQVTDQELNSVGWQEKEIIRAKFPTMEKADVIGW FDGDTLVSQVAVYPMQINVFGRIYSMGGLTGVGTYPEYSNMGLMHKLLQQALINMQKKGQ YICYLYPYSIPYYRRKGWELISDKIVYEIKDYQLPKNQQVTGEIRRVKTDSEELKAAYDR YAAHTHGAIIRDDLAWNEYWLWDKDDIMSAVYYNENEEPDGYIIYWIENEVFHIKDMIFN TEEARTGLWNFVSAHFSMIDKVEGNTYTDEPLAFLLEDASIQEVISPYYMARIVDFPAFI AQYPFKPDITEREWRFTMTDPILECNQGSFLLRISENGHGEATRISAQCPDKINIQTMTT MLMGYKRPDYLAKIGRLQTSEAVIDMLEDAIEQQTPYISDYF >gi|224461045|gb|GG657759.1| GENE 1449 1506048 - 1507397 1699 449 aa, chain - ## HITS:1 COG:FN1469 KEGG:ns NR:ns ## COG: FN1469 COG0534 # Protein_GI_number: 19704801 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 15 436 13 435 440 221 32.0 2e-57 MRLEGKSLKGDFIRFIIPSIVAQWVFALYTMVDGIFVARGVSEVALTAVNISMPYVMGLF AISILFAIGTSTVVAILHGEKNIGRANEVFTQNIVLLIVLSVIITLAVMLNLERFADFLG ATAQNREYVLDYLGTLVPFSGLFILAYSFEMLIKTDGYPKRATIIVTTGSLMNVVLDYFM VMEWNMGISGAALATGLSNAALIGLYLMHFLGGKGTIKFRKFRLDLPLVWREFKNGLPSG ITELSTGLIIFLFNQAILRYLNEDALVSYTIISYVNSIAIMSMVGIAQGYQPLISYYYGQ KRMDRCRKLMRYGIVAAVVVSVAFTAGSILGAKGIVGMFVAKELTELSAYSVHVMCIFVL SFLVAGYNIVIGGYFTAVERPVSAMVISVARSIVMLVLSLGVLTALFGGRGIWWSPTLAE GLTLILTAGLFLRYKKGWKKENHLSEVRL >gi|224461045|gb|GG657759.1| GENE 1450 1507502 - 1508299 833 265 aa, chain + ## HITS:1 COG:BH3496_1 KEGG:ns NR:ns ## COG: BH3496_1 COG0789 # Protein_GI_number: 15616058 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 111 1 113 117 73 34.0 3e-13 MKHYYRIGEISQLYNIGPDSLRYYEKLGILKPHRGENDYRLYHVHDLWRLNVIRDLRELG FSMERIREYLNDRSLSSTENMLQEELDIINERMKSLETLKSNIEDRLDTIRDAMKQPIGV IEEKELPVRRCHTIHAGYSQDEEMDMLIKQLLNKNKDKLYIIGNNRIGSVISAGSAASGD YRNYSAVFIIDKTGEDMIEAGRYLSVSYRGDCAQNEDYIPRLLAYAEEHGYALQGPFLEL LWTDIHQAAEEKEHITELQIKVGRA >gi|224461045|gb|GG657759.1| GENE 1451 1508360 - 1509574 1238 404 aa, chain - ## HITS:1 COG:MTH52 KEGG:ns NR:ns ## COG: MTH52 COG0436 # Protein_GI_number: 15678081 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Methanothermobacter thermautotrophicus # 1 404 1 408 410 510 59.0 1e-144 MFKINEDYLKLPGSYLFSAIGKKVAAYEEEHPEQSVIRLGIGDVTQPLAPAIIDALHGAV EEMAHAETFHGYAPDLGYEFLRTAMAEKDYKDRGCDIKADEIFISDGAKCDSGNIQEIFA KDNRIAVCDPVYPVYVDTNVMAGRTGTYNADTETWSDVIYMPCTKETNFAPELPKETPDI IYLCFPNNPTGSTITKPQLQEWVDYANKNGAVIIYDAAYEAYISEEDVPHTIYECDGART CAIELRSFSKNAGFTGVRLGAAVVPKDLKCGDVMLHALWARRHGTKYNGAPYIVQKAGEA VYSEAGRTQLGEQVAYYMKNAGIIYDGLKSAGYNVSGGVNAPYIWLETPKGMTSWQFFDH LLEHAGVVGTPGSGFGPSGEGYFRLTAFGSYENTVAAISRIKEI >gi|224461045|gb|GG657759.1| GENE 1452 1509604 - 1510437 1071 277 aa, chain - ## HITS:1 COG:BH3412 KEGG:ns NR:ns ## COG: BH3412 COG0253 # Protein_GI_number: 15615974 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Bacillus halodurans # 1 273 1 278 286 265 48.0 7e-71 MKFTKMHGLGNDYVYVNCFKEKIGNPPEAARILSDRHFGVGSDGLIMICPSEKADFEMEM YNADGSRGEMCGNGIRCVAKYVYDYGLTDKTNISVETLGGVKYLDLTVKDGKAVLIKVDM GRPELKPERIPIVSGGDAVISEPIVVDGAIYRMTGVSMGNPHAVIFVDDVKGLELEAVGP KFENHERFPKRVNTEFARVIDRETVEMRVWERGSGETLACGTGACAVAVACILNGLTEDK VTVRLLGGDLLIEWDKEADKVYMTGPATVVFDGEIQI >gi|224461045|gb|GG657759.1| GENE 1453 1510462 - 1511010 685 182 aa, chain - ## HITS:1 COG:no KEGG:Closa_1273 NR:ns ## KEGG: Closa_1273 # Name: not_defined # Def: ANTAR domain protein with unknown sensor # Organism: C.saccharolyticum # Pathway: not_defined # 1 182 1 182 182 197 52.0 1e-49 MVGIIVVFPNKDNAANIRNLLARGGMTVTGVCTTGAQAMNYADTVDEGIVVCGYKLKDML YSELREYLPSNFEMLLIASPDKWSSGLADGVMGLNMPLKVYDLLNTVEMMLESMNRRRRK RKQEPKERNPKQQEVIRRAKELLMDRNNMSEGEAHRYLQKNSMDSGTNMAETAEMVLSIM AK >gi|224461045|gb|GG657759.1| GENE 1454 1511058 - 1512389 1464 443 aa, chain - ## HITS:1 COG:BS_glnA KEGG:ns NR:ns ## COG: BS_glnA COG0174 # Protein_GI_number: 16078809 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Bacillus subtilis # 1 442 1 443 444 556 61.0 1e-158 MNNYTREDILKKVADEDVGFIRLQFTDIFGTLKNVAVTVSQLEKALDNNCMFDGSAIEGF ARVEDSDMYLYPDLNTFEIFPWRPQQGKVARLICDVYKADGTVFKSDPRYILKKVLAEAE TEGYEFNVGPECEFFLFHTDDDGLPTTLTHECAGYFDLGPLDLGENARRDMVLTLEDMGF EIEASHHEMAPAQHEIDFKYDEALATADNIMTFKLVVKTIAKRHGLHATFMPKPKCGTHG SGMHLNMSLCRDGINVFSDPKDEKGLSREAYYFIGGIMKHMKAISFITNPIVNSYKRLVP GYEAPVYIAWSSKNRTPLIRIPASKDRDVRVELRSPDPSSNPYLALAVCLAAGLDGIKNE ILPPESIDCNIYEMTEEQRKEARIDSLPGSLLEAAREFEKDDFIKGVLGEDLAEKFVRAK TEEYKAYRGQVTDWEIEQYLHRI >gi|224461045|gb|GG657759.1| GENE 1455 1512582 - 1512791 322 69 aa, chain - ## HITS:1 COG:no KEGG:Closa_1999 NR:ns ## KEGG: Closa_1999 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 8 56 1 49 59 62 57.0 5e-09 MKDIWKSIKGFFKRDWSPAEKVLLILCCLLIGIVKGFLLSPVKKGISCGNNNGNVYNELD DDYWLDDED >gi|224461045|gb|GG657759.1| GENE 1456 1512986 - 1513630 755 214 aa, chain + ## HITS:1 COG:TM0375 KEGG:ns NR:ns ## COG: TM0375 COG4869 # Protein_GI_number: 15643143 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol utilization protein # Organism: Thermotoga maritima # 7 178 25 196 210 189 55.0 3e-48 MGTAVPIETSARHMHISESDFKILFGEDASLSYKAPLSQPGQYVSGERLTVRGPKGSFEN IAVLGPYRRETQVELSMTDTRKLGVPAMIRQSGDTKGTPGCTLIGPKGTLEIDHGVIVAK RHIHMTPVQAAQFNVKDNDEVFVIMESFERSLIFADVVVRVSPDFALAMHVDTDEANAFA NENDPTGVILKLFGGRTYNLQKWAEELQSGIHRL >gi|224461045|gb|GG657759.1| GENE 1457 1513676 - 1513921 286 81 aa, chain - ## HITS:1 COG:no KEGG:BHWA1_00053 NR:ns ## KEGG: BHWA1_00053 # Name: not_defined # Def: hypothetical protein # Organism: B.hyodysenteriae # Pathway: not_defined # 2 79 3 80 83 90 52.0 2e-17 MDNRVSVISIIIKEEESVTAINELLHEFRQYIVGRMGIPYRDRGVSIISVVLDAPGDVTS ALSGKLGMQSGVTAKTLTAKL >gi|224461045|gb|GG657759.1| GENE 1458 1513942 - 1515144 1256 400 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 398 1 403 405 451 51.0 1e-126 MQGTRKVTDDIVWVGCNDRRLALFENLFPIPRGVSYNSYLIMDEKVTLMDTVDESATSQF MENLEYVLDGRTIDYLVVQHMEPDHCANIEELMKRYPDMQVVANTKTVQMIHQFFDVASD GRVVLVKEGDTLSTGTHTLRFIMAPMVHWPEVMVSYDEKDKILFSADAFGTFGALDGNIF NDEIDFERDWLADARRYYSNIVGKYGAQVQNLLKKAAELDVKMICPLHGPVWRSNIEFFV EKYDKWSKYEPEENSVVIIYGSIYGHTEAAVNSLACRMADAGIKGIKIYDASAVHVSELI SEMFRSSHIVLACATYNGGIYPPIENLLSDMKALSVQKRTVALMDNGTWAPAAGRMIAKK LEELKDITVLEQLSIKSVLKEDRADELEAFAQKIVEDVLP >gi|224461045|gb|GG657759.1| GENE 1459 1515332 - 1515973 830 213 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569367|ref|ZP_03778392.1| ## NR: gi|225569367|ref|ZP_03778392.1| hypothetical protein CLOHYLEM_05451 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05451 [Clostridium hylemonae DSM 15053] # 1 213 1 213 213 296 100.0 6e-79 MRVLIIAAVLMLAFGIIYGALRERIGCRSLVFKALATFMAVFLGMYGAIRFGGMTGTLVS FGLVLCMAADVALELDFVKGILLFGLAHICFITAFNRLARPEWYTVAGAAAVYLLLFLIF KNDMKTLGSLKTAAVIYMAVLCYMAASAVTLFAAFTTVASGMAAAGAVCFVISDGIIAYR TTRGKTQFCYGAAILLLYYSAVYLFGAALFTGL >gi|224461045|gb|GG657759.1| GENE 1460 1516066 - 1516836 1027 256 aa, chain - ## HITS:1 COG:CAC2383 KEGG:ns NR:ns ## COG: CAC2383 COG0726 # Protein_GI_number: 15895649 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 43 255 44 254 255 197 43.0 2e-50 MKQETVKRVKSYVVLALAAAVALAGSFKYVSKYVKVSSNVNGRELPIYSVETKEKKVALT FDAAWGNEDTQKILGILKKHDVHVTFFMTGGWVEKYPDDVKAVYEAGHDLGSHSENHKNM SQLSDEEKKQELLSVHKKVKELTGVDMNLFRAPYGDYDDAVILTARECGYYTIQWNVDSL DWKDYGVESILTTVLDNEQLGSGSVILCHNGAKYTADALDGLITGLEKKGYEIVPVSQLI YKDGYHMDVTGRQIKD >gi|224461045|gb|GG657759.1| GENE 1461 1516935 - 1517612 730 225 aa, chain - ## HITS:1 COG:FN1803 KEGG:ns NR:ns ## COG: FN1803 COG1309 # Protein_GI_number: 19705108 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 10 195 6 188 217 103 33.0 3e-22 MTINVRNRELKRKRIMSYFISAAIEIIEQDGIGELSIRKVAEKAGYNSATLYHYFSSLEE LTLFACAKCLNEYATELPSYLKQAKDMREQYLLNWECFCNHSFCHPDIYQVLFFSPAGAA NLPAVFKMYHEIFPMERSDSAAEYEEMLMEGDFYKRDYIALERIIQEKGYDIPPEDAMAV IEMNILIFRGMLAKMKDTVRTLTVKDAVKRTVTYMEHTLHSYHIG >gi|224461045|gb|GG657759.1| GENE 1462 1517887 - 1519062 1211 391 aa, chain + ## HITS:1 COG:no KEGG:CLB_1105 NR:ns ## KEGG: CLB_1105 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A_ATCC19397 # Pathway: not_defined # 6 390 20 404 404 447 62.0 1e-124 MGTENKHYKKAISVEAFIFLGIFLLIFGFMASRMGGVNMMNTLMNTAYKLLLDTVFYIMA IAVLAGAISGLFSEFGVISMINKALSPLMKPLYNLPGAAALGVITTYLSDNPAILGLAED RNFRKYFRKFQLPALTNLGTSFGMGMIVSTFMIGLNVKGGHAGLAVIVGNVGAVIGSIIS VRIMMQFTKKTYGTAEYCIPLEKGENAEQLFKFREVREGSAGGRAIEALLTGGKGGVDVG LAIIPGVLAICTLVMMLTNGPSESGVYTGAAYEGVALLPWIGEKIQFILTPLFGFTDPSA ISVPITALGAAGAAIGLVPNMVETGAAAANDIAVFTAMCMCWSGYLSTHVAMMSSLGANK LTGKAILSHTIGGICAGVAANWLFKLAVLIL >gi|224461045|gb|GG657759.1| GENE 1463 1519176 - 1519595 449 139 aa, chain - ## HITS:1 COG:CAC3714 KEGG:ns NR:ns ## COG: CAC3714 COG0071 # Protein_GI_number: 15896945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Clostridium acetobutylicum # 19 123 35 138 151 72 38.0 2e-13 MLMPRIFGERVFDDFWDFPMKRIASDSMMRTDVKEADGKYELTMDLPGFKKEDVKASLKN GYLTISAATDRSNDEKDEKGRYIRRERMSGSCSRSFYVGEAVREEDIKAKFEDGTLTLLV PKEESQPKVEEDKYIAIEG >gi|224461045|gb|GG657759.1| GENE 1464 1519798 - 1520415 90 205 aa, chain + ## HITS:1 COG:MA1487 KEGG:ns NR:ns ## COG: MA1487 COG1309 # Protein_GI_number: 20090346 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 1 62 1 62 204 62 45.0 6e-10 MPKFSETEKEIIKKKMLQEGERLFTSFGIKKVSIDEIVNASGIAKGSFYSFYPNKESLYM DIAGNLQKKMWSELEGFLNKNRSLPPRILCKKCFLCMFNGLQKYPMLKRADSETAEYLFR KLPREVMEAHSKDDRLEIIKLQEYGIHFNCSIEIAAKILQTLAISFLNLQNDDTDDQQVI MEVILDGVLKEIVCEEHDASQTEVL >gi|224461045|gb|GG657759.1| GENE 1465 1521033 - 1521155 75 40 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569373|ref|ZP_03778398.1| ## NR: gi|225569373|ref|ZP_03778398.1| hypothetical protein CLOHYLEM_05457 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05457 [Clostridium hylemonae DSM 15053] # 1 40 207 246 246 68 100.0 2e-10 MLILMPLIVSKTKNTWTSIIIHTLIGAPTQVMIILGVLGN >gi|224461045|gb|GG657759.1| GENE 1466 1521261 - 1522190 1009 309 aa, chain - ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 22 304 8 291 301 194 41.0 1e-49 MSGEVITTADDKKEQDVQRKKGFFAAFMAGLLWGASSPIAQFLFEDKGVTSEWLVPYRLV MAGVLLFLYAVLFKKQSPVVWKERSDGVRQIVFSILGMMGMQYTFFAAVQETNAGTATIF QYLNPAMLIIYFAVIYKVMPKAKEITAVLCSLAGIFLVVTHGNIHALSVSPKGILLGLLV ALTTCFYGVLPGPLLKKYPAEMVCAWAMIIGGLVLTAVTRPWRLYVHIDGAVVAAFLSIV ILGTIFPFCFYLSSLKSVGSVYAGLLSSVEPVAATVLAAVFLGTTFRMIDVAGFVLVLST LFILNINSK >gi|224461045|gb|GG657759.1| GENE 1467 1522214 - 1523098 1108 294 aa, chain - ## HITS:1 COG:mll0601 KEGG:ns NR:ns ## COG: mll0601 COG0596 # Protein_GI_number: 13470803 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mesorhizobium loti # 4 294 8 300 301 202 38.0 8e-52 MEIREGYMPFKEYKTYYRITGKKTGSKKPLVLLHGGPGSTHNYFEVLDRLAEEDGRELVM YDQIGCGESYVENRPDLWTAETWIEELAALREHLGLDEIHLLGQSWGGMLLLDYVCNHKP SGLKSLILSSTLPASWMWGVEQHRMIKELPQEMQDAIEKATSSGDYSDPVYAAAENEYML RHAAGAVTDDSPECLRRPVQKGGEAYVIGWGPNEFTPMGTLKDYDVTEQLKDIKEPALVI NGGNDLCTPYIAKYMYDRIPNSRWELFQFCRHMCFVEDNDRYVELMKEWLNAND >gi|224461045|gb|GG657759.1| GENE 1468 1523210 - 1525024 1836 604 aa, chain - ## HITS:1 COG:DRA0181 KEGG:ns NR:ns ## COG: DRA0181 COG2199 # Protein_GI_number: 15807849 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Deinococcus radiodurans # 416 599 179 348 362 104 37.0 6e-22 MKKRNIVVSIICAVLCCAGVTVIFQRYQSWTNQAFDKLAAQNIKAYSDSQNVEVTARVEN VRTTLKTIAEMVQQREESGGGTQDLKDYFNAVSKNEDIQAEGVRYYRFDSIDTSVMSEND LKMIEQLKKGESVVSDIFPSENENGTALYYGIAEPIFVDGKAEGFIRGLISSDTLLYSSQ TGFMRTDTESFLMYEDGTNAFTENLSEERGPYVNMYDSLENIGGSPDQVRELKENIKEKK QKVMIFMKGKEPVYVSYSFLPYNGWIILNVFYSADMNEYVVTLEDNGKKMTALLIGLAAV ILLLVAGIVYHSNKEHRFERKRTALLANFSDTILCEYDRRRDTLKCTSNISRLLAVEQTV ITEFKKYIFDSGLVYSGDHQVLDKILAGHPKEGETAQYEVRLKTKDGTYIWCRLDIITIG AKRERRLVIKVTDISGEKKKEMALVRKAERDNLSGLLNRGAFKEQVQEYIQQSQGGCLFL IDLDNFKDINDKYGHLAGDESIRKVGEVLKTCFRAKDIIGRYGGDEFFAFVPGRMTRDVI DGRAADVVHKVAAITLDEAPDLHFTCSVGIVRCGEGSTFKDCLKRADEAMYKAKDRGKNS WFVQ >gi|224461045|gb|GG657759.1| GENE 1469 1525070 - 1525924 979 284 aa, chain - ## HITS:1 COG:FN0674 KEGG:ns NR:ns ## COG: FN0674 COG0697 # Protein_GI_number: 19704009 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 275 9 280 282 89 25.0 1e-17 MFIFLQSVLYGIGNPVTKIAFESISVYWCLALRFSLAFFVLMLFFGKKIIRELKSARIMD CLPASLCMAAAYISVNLALKWTTATNVGFLMSLPVVLAPVLARVVLKTKYEWKHIPVQAA VVAGLYLLCCGEEGFVFGKGEAFALITAAAVAGALVYGEKSLAGMSACTVSAAQAGLTAV ISLALAAGLEELHVDSVTPAAWGVVAYLAIGCTCIAYLLQNTAVAKISSQTVSMLQTSQP VATAVFSFLILGELLTVRGYIGAAVILVCILAESVFARQGRRSV >gi|224461045|gb|GG657759.1| GENE 1470 1526163 - 1528649 2685 828 aa, chain - ## HITS:1 COG:CAC0454 KEGG:ns NR:ns ## COG: CAC0454 COG0577 # Protein_GI_number: 15893745 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 1 828 1 832 832 126 21.0 2e-28 MNIITKTAFANFKKNRSRNILIGAAIALTAMLLTIVPTVVFGSVDLRFTAVDNLYPTFHG MFRDVDEKAAQKMTGDARMTDTGLREDAAYMVCDDTDASISMVYCDRNTVKLNRLKLKEG ELPRRADEIVVSEGLLKVMGLKGGIGDKITVPYQPVMADGLGQAAEKEFTITGMTEDSEE AVEKNIYSSLISDKFAEEIIPAGEHRYRVYFSVAGAKGKTTDAIKDNIKEIGKSYNIGET DIVENGEYLFANYVDPAMYAGMVILMVIIVLAGILTIYSIYYVSMMNKVQEYGKLKAIGS TKRQIRQLVFREGFTVAAAAVPIGLMLGLGVGILLVNGMVSSDLASDNLMAEEMKKIIAD GGVSLVKPWILLLAAAVSCVSVYISLLRPMQKAAKISAIEAIRFQGTDKEKKKKQRRGYE EMNIRRLTASNLGRNKRRTVVTIVTLGITGILFVVVATILSCMNPKTMAMDTTRGDIHIT LNSESGNKMHPERELSNIQKNNPLTEELKEQIASIDGVDRIETYTGVSAALEELREDDGR PLETGLGGLSEEAMKELDRYVTEGSLADDSLKDGTGIILSGGYVKSYPGADWKTGDKVHL LIEDGDEVVKREFKIAAVTDAPYGLTGNGFILPSSVLEDICENDVTDDFYIFTEKGKAGS VAEAVKQLTDGQEFLQMDTWKDAYAQSEKSIGFMLYGCYGLMFVFGLIGILNLVNTMINS VYIRRRELGVLQAVGLSGKQTVRMLQLEGLFYTAGTLLLSVGAGSIAGYGCFLWARAESI MSIRTYEYPVVPVVVLAAIILVVQILITYMVNNSFKKQSLIDRVRFAE >gi|224461045|gb|GG657759.1| GENE 1471 1528650 - 1529318 315 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 201 1 199 223 125 35 7e-27 MRAILETEDLVKYYGEGENVVRAIDHTDLSVQGGEFTAIVGRSGSGKSTLLHMLGGLDRP DSGKVYIEGRDIFALKDEQLAVFRRRKIGFIFQDYNLMPALNVWENIVLPIGLDGKKVNQ EFVMDIVKSIGMEQKLHSLPNTLSGGQKQRVAIARALASKPAIILADEPTGNLDSRTEME VISMMKNCVNKYGQTLVMITHDETIAQMADRVIIIADGRVVK >gi|224461045|gb|GG657759.1| GENE 1472 1529434 - 1530519 895 361 aa, chain - ## HITS:1 COG:CAC0451 KEGG:ns NR:ns ## COG: CAC0451 COG0642 # Protein_GI_number: 15893742 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 91 353 151 410 416 137 30.0 2e-32 MDDRRIEKVMERRERGYIWLEKELRLSLLISAGMILTFFAVLYICDPGFRFFWQFLLAAL SADGIWQYVRYRKEYRNYVHIADYLEQFEEGNYEYRTETEYMRTGIRSQITEQLERMGNA FGTLRSGLIEEKENTKTLVTDISHQLKTPVAALSMCFELMEDARITDAERAEFAARGAGE IKKLKYLTETLTNLSRMEAGMIQIHPGEASLKETLVRAVNGVYLKANMKNIEIEMEDFKD MMLPHDKKWTAEAFANVLDNAVKYSPEGTTVHIRVSPQISYVFVEIEDEGIGIAKEEYQN IFRRFYRGSRPEIEACEGAGVGLYLVRQILEEQGGSIRAVAGKAGGTVFQMTLPKKSYVQ E >gi|224461045|gb|GG657759.1| GENE 1473 1530492 - 1531184 761 230 aa, chain - ## HITS:1 COG:CAC0450 KEGG:ns NR:ns ## COG: CAC0450 COG0745 # Protein_GI_number: 15893741 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 223 1 222 227 185 43.0 6e-47 MGTILLLEDDESLRRGISLKLEKEGYDVLCASGSREARRLFDENKTDLIISDITLEDGNG LDFCREIRRVSDVFILFLTALDQEVDIVNGYDTGADDYITKPFSLMVLISKVNAFMRRRE HTGGEGTVLTAPDLTLDCKEMKVFIKGEETPLSKKEMQLLAYFMEHPRQIISKEQILEAV WDVDGQFVDDNTVPVNISRLKKKLGGDSETEYIKNIRGIGYLWTTDVLRK >gi|224461045|gb|GG657759.1| GENE 1474 1531225 - 1532535 1388 436 aa, chain - ## HITS:1 COG:CAC1701 KEGG:ns NR:ns ## COG: CAC1701 COG0642 # Protein_GI_number: 15894978 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 217 435 345 562 566 162 45.0 1e-39 MRTRIQKSMILVIFTTLLISYAAMTAVVYRQTVDLLEDETRQEADYIRAAVKTAGTAYLE EMDAVRENTRVTLIDDSGDVLYDSREDDYTLKNHKNRPEVKEALSNGSGQDIRRSDTLGK EMFYYALRLPDGTVLRVSKTIDNAFYMAVQVLPIMGGLAAVMLFVAWMLSKWQVSRLIRP VNELNLEHPLENEVYEELRPLLESIDRQNKEKDAVANMRKEFSANVSHELKTPLTSISGY AEIMKNGLVKPEDIVVFSERIYNEASRLITLVEDIIKLSRLDEGKVEMEKEEVDLYELTR EICSRLSPQASSRNVHIEVTGEPVVYRGIRQILDEMIYNICENAVKYNRRGGSVSVWVGS TLKGRKVIVTDTGIGIPKEEQERIFERFYRVDKSHSKESGGTGLGLSIVKHGAMIHGADI RVESEPGKGTKMELTF >gi|224461045|gb|GG657759.1| GENE 1475 1532547 - 1533221 895 224 aa, chain - ## HITS:1 COG:CAC1700 KEGG:ns NR:ns ## COG: CAC1700 COG0745 # Protein_GI_number: 15894977 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 221 6 226 232 200 50.0 2e-51 MIFCVEDDSNIRELVVYTLESTGMKARGFEDGREFLEALALETPELILLDIMLPGEDGME LLKRLKSSVKTREIPVIMVTAKGAEYDKVMGLDSGADDYVTKPFGMMELVSRVKAVLRRT AKDDYKREDKIALGNIEIDIRKHEVRASGSTVNLTLKEYELLKRLMRNPNIVLTRDQLLE DIWGYDFDGETRTVDVHVRTLRQKLGACGEKIETVRGVGYKMCE >gi|224461045|gb|GG657759.1| GENE 1476 1533243 - 1533896 964 217 aa, chain - ## HITS:1 COG:aq_906 KEGG:ns NR:ns ## COG: aq_906 COG0704 # Protein_GI_number: 15606237 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Aquifex aeolicus # 4 202 2 200 221 119 40.0 3e-27 MRNKFDMQLDLLKEQLTHMGELCEIAINRATAALQEGSVSKARDVIRADEEIDQMEKDIE RLCLKLLLQQQPVAKDLRQISAALKMITDMERIGDQASDIAEIIISEKMSEATEIPKIGQ MSEAAARMVRDSVSAYVRKDLELSRKVVEADDAVDMMFVENKQELIDFIAENKGDKGKKA IDLIMVAKYLERIADHATNIAEWVEFSITGIHKESKI >gi|224461045|gb|GG657759.1| GENE 1477 1533898 - 1534647 330 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 244 2 239 245 131 36 1e-28 MGKLSIKNLELFYDDFHALKNVNLEIEKNKITAFIGPSGCGKSTLLKSINRMNDLVEGCR IEGDILLDGQNVFKDMDVNLLRKRVGMVFQKPNPFPMSIYDNIAFGPRTHGIRSKSKLDD IVEKSLRDAAIWDECKDRLKKSALGMSGGQQQRLCIARALAVQPEVLLMDEPTSALDPIS TSKIEDLATELKKDYTIVMVTHNMQQAVRVSDNTAFFLLGEVIEYNDTEKLFSIPSDKRT EDYITGRFG >gi|224461045|gb|GG657759.1| GENE 1478 1534723 - 1535586 1077 287 aa, chain - ## HITS:1 COG:SP2086 KEGG:ns NR:ns ## COG: SP2086 COG0581 # Protein_GI_number: 15901902 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 22 287 4 269 271 259 59.0 3e-69 MSSNQTTLKQKLGAYRRRPGSFLVMLLVMLSAILTFTVLIFLIAYILIRGVPYITPSLFS FTYTSENASLMPALINTVVMTLLSLLIAVPFGIFSAIFLVEYAGRGNRFVEMIRLTTETL SGIPSIVYGLFGMLFFVTTCEWGFSLLAGAFTLAIMILPLIMRTTEEALRSVPDSYREGS FGLGAGKLRTVFRIVLPSAVPGILAGVILAVGRIVGETAALIYTAGSVADVPSSVMGSGR TLAVHMYNLANEGLYMNQAYATAVILLVLVVGINTLSGIVAKRLTKA >gi|224461045|gb|GG657759.1| GENE 1479 1535579 - 1536472 788 297 aa, chain - ## HITS:1 COG:SP2085 KEGG:ns NR:ns ## COG: SP2085 COG0573 # Protein_GI_number: 15901901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 297 1 287 287 310 59.0 3e-84 MKSKAWKENFMRGVFFIAACASVLAVALICIFLFANGVPAMKEIGFFKFLSGEMWRPKNN IYGIFPMIIGSLYVTAGAILFGVPIGILTSVFMAKYCPKKIYKPLKSATELLAGIPSVVY GFFGLVVLVPWIREFGRTLKSMGLISSSGNGNSILTASLLLGMMILPTIIGVTESAIRAV PDHYYEGAVALGATHERAIFRVILPAARSGVVAGVVLGVGRAIGETMAVIMVAGNQARMP SGIFRGIRTLTANIVLEMGYAADLHRESLIATGVVLFVFILLINFCVALLNRRGSHE >gi|224461045|gb|GG657759.1| GENE 1480 1536473 - 1537399 1310 308 aa, chain - ## HITS:1 COG:SP2084 KEGG:ns NR:ns ## COG: SP2084 COG0226 # Protein_GI_number: 15901900 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 37 306 23 290 291 170 43.0 4e-42 MKMKKFIAVLAVVGMIAGLAAGCGSSDEKADSNKDSGNETEASSDWDSASDITIVSREDG SGTRGAFIELFGIEEEKDGEKVDMTTEEAQITNSTSVMLTTVSGDDYAIGYVSLGSLDDS VKALKIDGAEATAENVKSGDYKVSRPFNIATKEGLDNEVASDFINFILSEEGQKVVEENG YIALDDVKPFEGTSPSGKAVAGGSSSVSPVMEKLIEAYNAVNANAEIELQTTDSTTGMTS AVDGSYDIGMASRELKDTEISKGLNAQVIATDGIAVIVNNNSTVDELSSDQVKSIYTGEA LTWDEVIE >gi|224461045|gb|GG657759.1| GENE 1481 1537634 - 1538227 594 197 aa, chain + ## HITS:1 COG:no KEGG:bpr_I0833 NR:ns ## KEGG: bpr_I0833 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: B.proteoclasticus # Pathway: not_defined # 1 170 6 176 200 88 32.0 1e-16 MSIKGDKTKMYICSEAYKLFAEKGFKEVTMQDICRKTDLSRGGLYRHYENTAQIFSAVIS GMMAEQEDEFSEKIHSSMPAAQILDDVLNRYEEEMLDSGNSLSVAIYEYFSSPGISQYDD SILQQYLYSKKMWTELITYGMRTGEFKIVDPAAVFDLIVFSYQGVRMYSRLMPVHRDIPR GITGQIRNLLLSESEIR >gi|224461045|gb|GG657759.1| GENE 1482 1538227 - 1538991 666 254 aa, chain + ## HITS:1 COG:SPy1869 KEGG:ns NR:ns ## COG: SPy1869 COG2820 # Protein_GI_number: 15675688 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 17 210 30 211 259 62 25.0 8e-10 MKTVFYESRTSAPALFDPSDTTKQAENFPEVCISTFSRQIIDRFAALDHVKVIADLYSAN GINPVYKLSYGGREIAFYLSLVGAPAAVCGLEEVIALGGRKFVFFGSCGILDDEKVNGRL IVPSAAVREEGTSYHYLAPAAEIEPAAEETKLLKNCLENCGYPYVSGKIWTSDAIYRETT DAIQYYRELGCLGVDMEYSALLAAAAYRNVPFIQFFYGADSLAGGKWQPRDLTDYGLSNS EKYMALALECGLAM >gi|224461045|gb|GG657759.1| GENE 1483 1539044 - 1539553 243 169 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase [Brachyspira murdochii DSM 12563] # 7 169 5 166 166 98 32 2e-18 MVKITYRRAMESDAEKIVAFYNYVGGETSYLSFEKDEYPMDVKAQAESIRGLEDNMTNIM LLAMDGEEIVGIATISSSHKIKARHDGELGIVVAKKYQGQGVGTELIRQLTEWAKGNGIT RRISLDTRADNVKAVELYMKFGFIVEGCRRNATLLDGKYYDLYVMGMMI >gi|224461045|gb|GG657759.1| GENE 1484 1539556 - 1540014 313 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569392|ref|ZP_03778417.1| ## NR: gi|225569392|ref|ZP_03778417.1| hypothetical protein CLOHYLEM_05476 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05476 [Clostridium hylemonae DSM 15053] # 1 152 1 152 152 250 100.0 2e-65 MRKRAIRFVSVLILFYSVCCMLWGGARILSVISAVSEEGGMFREVLRYLLYFLKGAVGLV TGVYGIKSVREVWRSSFTVYAAVTAAVFEAAVMILYGFKLYSILYTGLLVLLIVLIRSGE DKEKETAEETDKSADGLFAAKQAMSRNRCERR >gi|224461045|gb|GG657759.1| GENE 1485 1540118 - 1541002 1025 294 aa, chain - ## HITS:1 COG:BH2916 KEGG:ns NR:ns ## COG: BH2916 COG1284 # Protein_GI_number: 15615479 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 5 292 18 292 293 135 31.0 1e-31 MGRFKENKKDLLIQAVYAVMGSLLFALGVNLIIVPLGLYNGGFMGIAQLLRTFFVEVCRL PVPSGIDMSGVIYFIINIPLFYMGLRVLGKEFAVKTLITVTIQSIFLVVVPIPAAPIIDD FLTSCIIGGLIAGTGTGLVLRGRSSGGGQDIIGLCCAKKYPNFSVGRINIMMNVLVYVIC LFMFNIEIVIYSLIYTTVLAMALDRVHIQNINTSVMIFTKKLGISKAIIEQTGRGVTNWD GEGAYTNKTSYILFVMISKYEVGQIKRIVHSIDPDAFMIFTEGCAVKGNFEKRL >gi|224461045|gb|GG657759.1| GENE 1486 1541121 - 1541828 747 235 aa, chain - ## HITS:1 COG:lin0794 KEGG:ns NR:ns ## COG: lin0794 COG2357 # Protein_GI_number: 16799868 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 9 214 7 212 212 215 50.0 4e-56 MAATIKNYEDVDSWKTIMFLYTSALKEVGTKLEILNDEFQHVHQYNPIEHIKTRVKTPES IVKKLRRYGYETSIENMVKYVNDIAGVRLICSFTSDIYRLAEMIGNQSDLKVLSIKDYIK NPKESGYKSYHMLVSVPIFLSDSVVDTKVEIQIRTIAMDFWASLEHKIYYKFEGNAPDYI SRELRECAEMVSTLDEKMLSLNEAIQACLEEQEEFNKRTKNDTENRKNNDSMIQA >gi|224461045|gb|GG657759.1| GENE 1487 1541949 - 1542497 525 182 aa, chain - ## HITS:1 COG:TM1465 KEGG:ns NR:ns ## COG: TM1465 COG2109 # Protein_GI_number: 15644214 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Thermotoga maritima # 13 182 3 170 170 114 39.0 8e-26 MTEAQGGLMTGTGRIHIYYGNGKGKTTAAVGQAVRAAGFGLKVLVFQFLKNNSSSERNVL EKTENITCLPGREHVKFVSQMNGDEKAELRHYNTKALDEIVKFCSPFDVLILDEILCAVQ LGVLSEEKLIRFLEHKPRGLEIVMTGHEVSERMLELADYATEMRKVKHPYDEGKMARGGI EY >gi|224461045|gb|GG657759.1| GENE 1488 1542672 - 1543736 1440 354 aa, chain - ## HITS:1 COG:BH3254 KEGG:ns NR:ns ## COG: BH3254 COG3641 # Protein_GI_number: 15615816 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Bacillus halodurans # 8 353 14 334 336 229 48.0 7e-60 MEKLKKVLDRIFIDGLSAMAQGLFATLIIGTIIQQIGTLIGGPAGDMIYALGKVAASLTG AGIGAAVAYRFKESPLVVVSAATAGMVGAFAGKLLAGAVLVDGAMVYAGPGEPLGAFVAA YIGIVFGHLVSGKTKVDILVTPIVSIGTGSAVGLLLGPPISGFMAWLGSLINWGTEQQPF LMGIVVSVLMGMILTLPISSAALGIILNLSGLAAGAATVGCCCNMVGFAVASYRENKIGG LLAQGIGTSMLQVPNIVRRPVIWLPAILSSAILGPVGTMALHMTSNATGSGMGTAGLVGQ IMTWQTMIQTEAASIVMIKILLIQIILPAVVTLVISEFMRKRQWIRFGDMKLEL >gi|224461045|gb|GG657759.1| GENE 1489 1544013 - 1545107 964 364 aa, chain + ## HITS:1 COG:TM0121 KEGG:ns NR:ns ## COG: TM0121 COG1509 # Protein_GI_number: 15642896 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Thermotoga maritima # 32 364 27 358 368 289 44.0 5e-78 MNWQDELRHNITTLDELAAYIPGIDTGDCNARNILEKYPMSVPRYYLSLINTDDEGDCIR KMSIPSFSEMDITGTFDTSGESSNTKLRGLQHKYPQTVLLLSTNRCAMYCRYCFRKRMVG SHTEEIVEDIDKAVSYIAEHTEISNVLISGGDSFLLDNAAIEHYLSALCSIGHIDYIRFG TKVPVVFPQRITDDRELQDILKKYCTKKQLYVMTQFNHPSELTEHAVNAVNCLKSLGLIV KNQTVLLKGINDDPAVLAGLMKQFTKIGILPYYVFQCRPVTGVKNQFQVPLRTGYDIVEQ AKRLQNGNGKCFRYALSNPDGKVEIIGKMDDSHMIFKYHQAKNPDNIGRIFIKEISEDAC WAEE >gi|224461045|gb|GG657759.1| GENE 1490 1545149 - 1545685 556 178 aa, chain - ## HITS:1 COG:lin2129 KEGG:ns NR:ns ## COG: lin2129 COG1827 # Protein_GI_number: 16801195 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Listeria innocua # 9 176 6 172 173 134 44.0 7e-32 MMKGRHMDGEKRREEIMKLLETEKEPLSGTALARRLGVSRQIIVQDIALLRATNKNILST NKGYILYGKDSAAATCKRVVMVKHDNDKMAGELYCIVDAGARVLDVIVEHEVYGQIAVDL VINSRKDVDEFMAKILSDNARPLKELTGNVHYHTIEASDSEILDEAEKRLKEAGVLAD >gi|224461045|gb|GG657759.1| GENE 1491 1546102 - 1548375 149 757 aa, chain - ## HITS:1 COG:MA4292 KEGG:ns NR:ns ## COG: MA4292 COG3291 # Protein_GI_number: 20093081 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 114 564 613 1107 1995 213 32.0 2e-54 MKKKKKPCSLRITKRFLCAVMTAVLVCQLFSLPALAQDAPAPITVDPLPQGADVIAVPLG TAKEAIPFPELTADGGKVTLDSPAWRCEAYDPDKPGNYVFKAKLSEEYTGGGVFGDDLTV TVTVENLSQNTTDKTEQSVHESEKAQMDDTVTPSRAAKAPGSTVTVDGLKYNILTMPDGG ENGTVEVGVNQSYNGNNLSIPSTITVDNDPDNNGNYDVVQIVNGAFESNQNLTGTLTIPS SVTSIGEQAFQQCSNITELHCLSTKTLTIAWFAFRGCTSLESVSFPDSLQSIEYSVFKDC GSLKSVSFPESLQSIGDSAFEGCKRLASPSFPQSLQSIGINAFKNCKALTSLSFPLALHT IGSNAFRDCKGLKSVTFQNNLQSIQDFAFSGCSGLTSLNFPESLETIGSYAFTGCNSITA FTVPDNNPNFTSENGVLYDKRMETLLIYPLGKEETSFIVPKGVQTIGASGFDNCKNLKSV SFPDSLQFIGMHAFQGCTSLESITFPQSLQSIQNYAFRGCTSLESVTFPQSLQSIQDYAF RDCTSLTNLTFKKDSPPQIGSLNFQVFASIAPTGTIYFPTGQEGNYTEDWKKNTLKLDNN WTLQPAYRLEVKNGTDNTNSGLYLEGDSVSIQADPAPAGYVFDKWTTDKSGSFTKETDPS TTFVMPADHVTVSAAYKKDTSNPGPGPGPNTGSGQNIHVYDTNSRWHDRTAGDGANSIPK TGDTETPLPWVLTMLAALVGCVSLLLYRKHRCTKRHK >gi|224461045|gb|GG657759.1| GENE 1492 1548672 - 1550297 1309 541 aa, chain - ## HITS:1 COG:CAC2252 KEGG:ns NR:ns ## COG: CAC2252 COG1501 # Protein_GI_number: 15895520 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Clostridium acetobutylicum # 237 368 952 1068 1217 60 34.0 8e-09 MWGGSVTVALPQGYQFTGGALGNLKLFTVNRQLEPPSITAASYDTAVPVVGGAVTVTPGT YTANEAGAEGEHRYTWYRSDRETGLGTPIARTKDYTPTGEDFGKYIWVETTPRGEITNFG GRPVASPRLQVGVKLTVAVTGSAGGTSPTIDGTAAGGGVVIYGPVTVSFTKTAAGDTVKW TASPNEGSFDDDTAATAVYTPAAQPSAGTIALTATLTVNAKDQDQPAPAPFELAYTANGE TDYTVTIPEIAGAEYSFDGTTFGAERSKTGCKPGETVTGYARLAAKPGYNAGAVTGANVT LPLLDVHTPTISPSGGTFTGAQSVTLSCTTAGADIYYTLDGNTPNAGSTRYTGTFTLTKT ATVKAIAVKAGMADSIVASASFTRATDDLTPVDLTKDATFTLNGDFALIGRVLLDGKEMG QVNKTPTSADLTWAGYPGNAGKLEKGSVIVTLYKEFLKTLPEGRYTLTVEFNDAGGSVST GDLQFAVPKQQEPKPTATGGGSAKTGGGSAKTGDESNMALWIVLVCVAGFAVYRKRKYRN Q >gi|224461045|gb|GG657759.1| GENE 1493 1550167 - 1552806 1419 879 aa, chain - ## HITS:1 COG:MA4292 KEGG:ns NR:ns ## COG: MA4292 COG3291 # Protein_GI_number: 20093081 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 404 542 1409 1544 1995 73 35.0 2e-12 MKKKYRITKRFVSLLVVLALVVTLVPAAVLAQDAPTMESAAVTVDAISEGMDVIPVPFGT MQDAIPFPLLTAGGVSLDSVTWEAETYDAQQPGGYVFTAALPEGYMPPDGQADISVTVTV AEPQGTAGETIQANDETPSPVPEETVTGQPSQPPNGIAPSAPETAPVVVSAFDEIEPAAY EIAVGGGLPALPEMLKAADADGETIAIEGVIWEADNFDANTPGEYVFTAKLPEGYAAAPE AEAPQITVTVTEPPLAVSAFGAEETVTVISVYLGDDKWDNPVYYDVDEIHSAADLGLPDS LVGTNEKNQTIEIAGVTWECAAFNADTLGTYTFQLALPAGYTAAGETTTITVVLYNEFAA GGLQYWILTEAPEGAVALAGWAGAPQVSLKVPAAVSNGGSSYRVTEVVPNAFENDGAIKN LDLSGADNLTEIGAYAFADCRATNPLTIPANVVRIGNCAFAGGYFFALNLQGAARLTTIG IFAFSNLRIKGTVTIPGGVTSIGSLAFENCESLEVLDLSAFRGTLGESVFSDCRRLSTVI FGQAEAPKLPDDTFEDAGLSGGYIHCPKGATGYEKVLGLFSGGWSLDYLDIHTVTVNGAV GGTGWVASGSTGGAGGIVSLGAQPQSGYAFVRWDTEPAVTWLDGTNQYDAGAFFSMPDRD VVVTPVFSLMYGLSGTVSANGRPTPGGLQVTLYNAAGKRVGSAATNADGKYTFSGLTAGT YQVTVMGATISDIQYYQTTREFELTDRDRTDADVALETGVTQVGFVSAKANGTQNLDTST QIDLRFDVPVPLTKNCVALKFNDGGAADVIRLVDEGQLKTDWVLEIGNVVTPANKGYVGG QRDRRSAAGLSIHRRRVGQPETVHCEPPAGASLHHRRKL >gi|224461045|gb|GG657759.1| GENE 1494 1552921 - 1553610 653 229 aa, chain - ## HITS:1 COG:BH4027 KEGG:ns NR:ns ## COG: BH4027 COG0745 # Protein_GI_number: 15616589 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 1 223 1 226 236 124 35.0 1e-28 MDDKGTVLLVEDDKAIMRTNRRILERDGFRVLCAQTLAQARTQLKSQPDVLVLDIMLPDG SGLDFCGEIRRHTAAPVLFLTALDEQHEVIKGLKSGGNDYITKPYSVDEFAARVSAQYDL ARRVRQSAGREHLLTCGALELDVIAQRAYMSSQDMLLTQKEFALLMYLMQNRSKDTSPQL LYETVWRQPMADDDSAVKNTVYRLRKKLEGSGYTITTRRGEGYRFEEVL >gi|224461045|gb|GG657759.1| GENE 1495 1553921 - 1554184 388 87 aa, chain + ## HITS:1 COG:no KEGG:bpr_I0194 NR:ns ## KEGG: bpr_I0194 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 87 1 87 89 104 58.0 1e-21 MFRLWGKEFKDNKMLRDTVICDDSDDTRTHKIFSALDAICYEFDLSKPIWFDATVEEFRR HDKARFYQDNFVDSIDFDYLEIHVIEE >gi|224461045|gb|GG657759.1| GENE 1496 1554251 - 1555669 191 472 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 344 472 294 413 413 78 34 2e-12 MNWMDLLRMSGSNLKRRKLRTFLTVLGVVIGTASIVVMISLGLGMQQSLYKEVEQSGGLT TITVTGKDAGQSMMAYSGQENSDESTQYVTDRTIKQLSELGHVTTAAPVYEMSVIMLKGK YEAYIQLVGMTPEGLKAKNIELGEGSLPKQGGSQLDILYGNTVITNFSERNSQSSYWDTG ELPEIDLMKDSVFLILDQDGYFRSQEQSFGNSDSGGNESGGPGESQPSQPVKKHAVTASG IVAGGPDDYNANAYSAFCDLETLKKVLKKDFSGRTVPGQPTTKSGKPYKEFCYTSAQVKV DDIDKVEEVSSIIREMGYNTQTNAEYLDSMKSQFAIVQAVLGGIGAVSLLVAAIGIANTM MMSIYERTKEIGVIKVLGCSLKNIKQMFLLEAAFIGLIGGLVGNILSFIMSGIINFLTGN GSAMGIDGNISYIPWWLVLLSMGFAVFVGVAAGYFPSLRAMRLSPLAAIRSE >gi|224461045|gb|GG657759.1| GENE 1497 1555632 - 1557143 1365 503 aa, chain - ## HITS:1 COG:no KEGG:Closa_2183 NR:ns ## KEGG: Closa_2183 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 45 482 197 601 611 177 26.0 1e-42 MKTIKKLLAALIVSAVTASTFLPFPAKAAGDQITLETSGVLTYQYQKPQKFVVNVKNNTD SEIKNIVVSPDMKDDVSQWPFKTEAQKYTAKIDALAAKETKPVEFNFTERDDVPSTRYTL LFNFTADGGISGSQSFYVLTTAKPEDKKNNSGQDEQRRPAQVQTSSGSGEGVPASADAGG FSNGGASYSGGGEEGSGSTGSVPRVIVTGFDTDPAEVRAGSNFKLTVHLKNTSKATRVSN MLFDLKAPTEGADEQTTSPAFLPSSGSSSIYLDGIKAGGAADITIQLNAKADLLQKPYSI DLSMKYEDGNAAQIEGASSISIPVKQDARFEFSEFEISPETITVGEEANVMCSLYNLGRI KLYNVKASFEGKCVKKAETFIGNVESGATASIDATLEGTKESAGSEKVTMTLSYEDEAGK VSTMTKDLQIEVGPEGMNDMPAAEMEETEQGGLPVIPIAIAVIIVAAAAAAVIIIKKKKK KQMADKEEELLNELDGPSEDERE >gi|224461045|gb|GG657759.1| GENE 1498 1557140 - 1557862 315 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 203 1 199 223 125 33 7e-27 MAKVIEVRDLYKLYRVGDEIVRALDGLDFSIYEGEFCAIVGTSGSGKSTLLNMLAGLEKP TKGSVVIGGQHIETLNEEQLVKFRRENVGFIFQSFHLLGTLNALENVALPLSFRGMSKEK RLKKADEMLDLVKLKKHKNHRPNQMSGGQQQRVGVARALVVDPKIIFADEPTGNLDSHTS EEVMSLMQQVVREQKKTLVMVTHDSHLATYADRIFHIRDGNIINIEENRRKETVEGGLSL >gi|224461045|gb|GG657759.1| GENE 1499 1558041 - 1558361 298 106 aa, chain + ## HITS:1 COG:SPy2172 KEGG:ns NR:ns ## COG: SPy2172 COG1695 # Protein_GI_number: 15675909 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 103 1 103 108 111 50.0 3e-25 MIFPMNTPMFDLLVLAVVEKEDSYGYQISQVIKQVSNTKDSTLYPVLRRLQEQRYLTAYD QPYQGRNRKYYRITDEGRQTFEMLSEEWSLYKNAVDDIVKGGMNIE >gi|224461045|gb|GG657759.1| GENE 1500 1558354 - 1558944 701 196 aa, chain + ## HITS:1 COG:SPy2173 KEGG:ns NR:ns ## COG: SPy2173 COG4709 # Protein_GI_number: 15675910 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 166 1 168 195 103 34.0 2e-22 MNRADYMKSLEHGLKRLPKEDYDRAISYFEEYFEEAGPDNEKQAIEDLGSPAMAADQIIR DFAVENAEKPTKNVKRSFSAVWVGILAVFAAPVGLPLAFAAAALGLAFILVIVSLIFAVF CTALAFAASSVPAVMAGIWFLFTSPASGIATIGAGLIGAGIGIWVIIGCITLCRWFLNTM TKLFGRIAKGGNRHEK >gi|224461045|gb|GG657759.1| GENE 1501 1558934 - 1559872 866 312 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3297 NR:ns ## KEGG: Cphy_3297 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 273 3 305 338 83 24.0 1e-14 MKNKRRIWLISFLCVGAGIVILILGLMLGGRPGFYIDGSGIHSAAENGGKRNYVKNEKEL QEFTDIDIDLDYADFQIIPSDTFKIEYCLDGTKDPVCTVKDGRLTVREADYKRIFNFTFI SPMSDDFTDSYVKLYIPENAVFDTIKILTEDGDILLPALKSDTLDLESDYGDITVKDFEG RRLFAELEDGSFSSKGIKVDELKLSNEYGDIALQDAKCAYLEAGLTDGDFTADSLSSDRL EIDSEYGDVFLGLSSTVKEYDLDLSTEYGSIQVPQYDVIYGDDGSQCRVANSSGKTVKVS SEDGDIQVFDAR >gi|224461045|gb|GG657759.1| GENE 1502 1559936 - 1561576 1799 546 aa, chain - ## HITS:1 COG:SP0496 KEGG:ns NR:ns ## COG: SP0496 COG1283 # Protein_GI_number: 15900410 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Streptococcus pneumoniae TIGR4 # 1 545 3 543 543 318 34.0 2e-86 MDYVNIIIPFVGGLGMFIYGMQIMAQGLENAAGNKMKSLLEVLTKNKLMGVLLGAAITAV IQSSSATTVMVVGFVNAGIMNLSQAMGVIMGANVGTTVTGWLVSSVEWAEFLSPSKLAPI AVMLGVVIMLIGKRRSSKEIASIIVGFGLLFIGITTMSSAVAPLQDSESFRNIFVTLGSS PILGILAGALVTAVIQSSSASVGILQSLAAAGLVPFSAAIYIIMGQNIGTCVTAMLSSMG AKKNAKTAALMHLLFNIIGTVIFSVIAIIYFEVLNPSAGTGVITQTEISMVHTAFNIGTT VLLFPMSNWIIRLAKKIGRVEEAEQDKSKVLLDDRILETPVIALQSTVKEVARMGRIVED SLDVARNVLFTKSHDDIQFLKDEESTVDRLSAGITAYSIKLSSLQISEREHQDVAHLLQM VSDIERISDYCENISEFAETLYEKKVTFSDIGKEQLEEMLDVCIDSYKYALRAFVEGSRE MALKVIEKETKADDLEITLRSRHIKRLTNNQCNTEAGIVFLDTLVCLERISDHARNIAEE VLEQIA >gi|224461045|gb|GG657759.1| GENE 1503 1561660 - 1562016 462 118 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2431 NR:ns ## KEGG: EUBREC_2431 # Name: not_defined # Def: sporulation protein # Organism: E.rectale # Pathway: not_defined # 1 117 22 138 139 167 76.0 2e-40 MDYVNAFWIGGLICALVQILLDRTKLMPGRIMVLLVCSGAVLGALQIYEPFLKFAGAGAS VPLLGFGNVLWKGVKEAVDSHGFIGIFMGGFKASAVGISAALIFGYLASLIFEPKMKK >gi|224461045|gb|GG657759.1| GENE 1504 1562141 - 1563145 1083 334 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0480 NR:ns ## KEGG: Cphy_0480 # Name: not_defined # Def: stage V sporulation protein AD # Organism: C.phytofermentans # Pathway: not_defined # 4 334 13 355 355 423 58.0 1e-117 MIQGLQSIAFENSPYIVESASVVGKKEGEGPLGSMFDMVEENDLFGEDTWEAAESTMQKQ ACVLALGKAHMEAGEIRYLFGGDLLRQGVATSMGVEELNIPMFGLYGACSTSGEAIALAS MSVAAGYGDNMLAVTSSHFGSAEKEFRFPLGYANQRPLSAHWTVTGSGAFVVGTKRSHVR VTGITVGKIVDYGLKDSQNMGACMAPAACDTILRNLEDFGRTPDDYNRIVTGDLGYVGQS ILFDLMRGKNVDIKKNHMDCGMTIYDQKTQDTHAGGSGCGCAAVTLSSYILPKLARGEWK RILFVPTGALMSTVSFNEGESVPGIAHGIVLEHC >gi|224461045|gb|GG657759.1| GENE 1505 1563201 - 1565924 2554 907 aa, chain - ## HITS:1 COG:BH2515 KEGG:ns NR:ns ## COG: BH2515 COG0474 # Protein_GI_number: 15615078 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus halodurans # 21 879 22 891 902 675 44.0 0 MFENKTVRETCEELQTDSEYGLSYTEAAQRLQDNGANELKSAKKKTKVESFFEQLNDPLI YVLLAAAAVSILLQEVSDAIIIIVVVLMNAFVGIIQEGKAQKALDSLKKLTSPRAVVIRE GKEQEVQASSLVPGDIVCLDAGCQIPADLRLVKANNLKVEESALTGESLPIEKNVDFIAG KGMGRGYKASSVPLGDRKNMAYMSTIVTNGRGLGIVTATGMNTEIGKIAALINDSQEEIT PLQKRLGELGKMLSILSLGLCAALFFIAVLQHRNMAEMLITAISLAVAAVPEGLPAVVTI CLALSVTRMVKVHTIVRRLPSVETLGAVSVVCSDKTGTLTQNRMTVEGCYIDEKIVDSSE LKLREHSELLQGMTLCNDAVQKDGSSIGDPTELALLNLAGQYGIRRETLEREMPRKKELP FDSERKMMSTMHKNGSTNITYTKGAPDVVLKRCSRILIRGKVTAMTDTHRRQIQEAIEKM SSQALRTLAVAMRTGGNAPVERELTFVGMVGMRDPARPEAKGAVARFRQAGVTTVMITGD HVDTAFAIARQLGIVERQEQCMTGEEIQSLPDEKFLRKLDDVRVFARVSPEHKVRIVKGF KTKGNIVAMTGDGVNDAPSLKSADVGIAMGMTGTDVARQASDIILTDDNFATIEKAIEEG RGVYENIRKTVIFLLSSNLGEIMTMFLAVLCDIASPLKSSHILWINLITDSLPALALGVD ENDGDSLMEEPPRKPKESLFARGGLACTCFYGLLIAGISLTAFFTVPYELIMSKGASFSI SNIALALQNSDILMRAQTYAFTVLGMSQLFHAVGMRDIHKSVFRMNHFENKWMIAAFVLG FVLQISVTEVPVLIKAFGTVHLEFHEWLRLTILAAFPILAHEFMVFLQKPEKDVCNQVKM ESIRIDR >gi|224461045|gb|GG657759.1| GENE 1506 1566045 - 1566506 606 153 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0479 NR:ns ## KEGG: Cphy_0479 # Name: not_defined # Def: stage V sporulation protein AC # Organism: C.phytofermentans # Pathway: not_defined # 2 148 18 164 167 186 61.0 3e-46 MDKQKQQQAYENYVKQKTPMHNLPANMAKAFVVGGIICVIGQAILNYCEKAGLDKDTSAG WTSLILILLSVLLTGFNLYPSIAKWGGAGALVPITGFANSVAAPAIEYKKEGQVMGIGCK IFTIAGPVILYGIFTSWLIGLGYWVLKLADIVK >gi|224461045|gb|GG657759.1| GENE 1507 1566628 - 1567044 352 138 aa, chain - ## HITS:1 COG:no KEGG:Closa_1564 NR:ns ## KEGG: Closa_1564 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 134 1 135 141 89 44.0 5e-17 MWAAQILLALIGLSAGVVVAGGLFSFIIGLGVVSDFADRTHTGEHVLLYEDCVALGGMLG NIFFIYKIAIPHGGFLLPVFGLVAGIFVGCWSMALAEILNVFPIFIRRVKLLRYIPYLIA GMALGKGIGALIFFINRW >gi|224461045|gb|GG657759.1| GENE 1508 1567004 - 1567678 593 224 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01606 NR:ns ## KEGG: EUBELI_01606 # Name: not_defined # Def: stage V sporulation protein AA # Organism: E.eligens # Pathway: not_defined # 5 202 20 213 218 154 37.0 3e-36 MAANSETVYIKADRNVEVTKPDVTLGDVLTMECSNPSVVPKLNTLKLLKFHHTDKKNQNR VAISILKVIEIIHEQFPNMDIQNLGEQDFIVTYEQQQTAGGLVHLLKAACVIVITFIGAA FSIMAFNNDVDTVKLFSQIYELVTGQKSDGFTVLELTYCIGIIIGILIFFNHFGKKKFTV DPTPMEVEMRLYENDIQTTLIETYSRKGKEQDVGSTNTSGTHRT >gi|224461045|gb|GG657759.1| GENE 1509 1567681 - 1567836 209 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569421|ref|ZP_03778446.1| ## NR: gi|225569421|ref|ZP_03778446.1| hypothetical protein CLOHYLEM_05505 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05505 [Clostridium hylemonae DSM 15053] # 1 51 1 51 51 84 100.0 2e-15 MDEARKKLRVCLICVVAAAVIIGCIYYFNDVRSKSDVSEGTLIMTEMESRV >gi|224461045|gb|GG657759.1| GENE 1510 1567911 - 1568624 797 237 aa, chain - ## HITS:1 COG:BH1538 KEGG:ns NR:ns ## COG: BH1538 COG1191 # Protein_GI_number: 15614101 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 7 237 22 250 252 226 53.0 3e-59 MDHTIALIKKSHQGDEKARAQLVEENAGLVWCIVKRFYNRGAEAEDLFQVGNIGLLKAID KFDMSYEVKFSTYAVPMISGEIKRFLRDDGMIKVSRSLKELSYKAYLCQEKLQEALGREP TITEIAEYLEVDREELTMALDASGDIESLHKPIYQKEGQEIRLMDKLPEKEGGEEKILNH MLLQQLLEYLNKDERQLIYLRYFANQTQSQVGQELGISQVQVSRLEKKILKRLRERI >gi|224461045|gb|GG657759.1| GENE 1511 1568603 - 1569058 559 151 aa, chain - ## HITS:1 COG:BH1537 KEGG:ns NR:ns ## COG: BH1537 COG2172 # Protein_GI_number: 15614100 # Func_class: T Signal transduction mechanisms # Function: Anti-sigma regulatory factor (Ser/Thr protein kinase) # Organism: Bacillus halodurans # 5 145 3 144 146 147 54.0 6e-36 MENTNEMQLIFDSRSSNESFARVTVAAFMTSLNPTVEEVSDVKTAVSEAVTNAIIHGYEN EVHNIYIRCRTEGKTLYLEIEDKGKGIPDVEKAMEPLFTTKPELDRSGMGFSFMEAFMDH LDVVSEPGKGTTVKMEKTIGKGRKVWTTQSL >gi|224461045|gb|GG657759.1| GENE 1512 1569059 - 1569370 264 103 aa, chain - ## HITS:1 COG:BS_spoIIAA KEGG:ns NR:ns ## COG: BS_spoIIAA COG1366 # Protein_GI_number: 16079404 # Func_class: T Signal transduction mechanisms # Function: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) # Organism: Bacillus subtilis # 5 103 9 107 117 85 39.0 3e-17 MKYEVQENCLTIFLPTELDHHNAESIRREADHLIEKNHIRYVIFDFADTVFCDSSGIGVI MGRYKRIYMLGGEVCAVHTNERMKKILTMSGATKIMKIYEEDK >gi|224461045|gb|GG657759.1| GENE 1513 1569553 - 1570914 1499 453 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2575 NR:ns ## KEGG: EUBREC_2575 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 11 441 33 455 456 271 37.0 5e-71 MDYSMKLLYQSNYWYNDGLKKANIRDLSGAITSLRRSLQYNRANIAARNLLGLVYYGRGD IGEALVEWILSKNFQSHENISNYYIQKLQETPGELDGLNQAIKKFNQALGYARQNGEDLA IIQLKKVVAAHPTFVKAYQLLALLYLQTEQYSKARQCLRIAHKLDTTDDITLRYMHELNQ VRKSKNARIKEKDAEEQQQTVTYNIGNETIIQPVSSSFKEHTGLHTVVNIAIGVLVGVAV MWFMIMPAINASRQDKLNKQTVAFSDQIATQKAQISALKKELEDYRSTSEETENAKATAT STQESYEIVMNISKHYSAKDMSDDAMLDELLKVNAESLGTVGRERFDEITGELYPKMCEN LYSTSKNNFEVANYDTAISNLERVMQMDEGYSDGGAKLLLAQSYEKKGDQDKANIEYQKI IEDYPNTEAAASAQEALDAQKAGGDKKDDGQTE >gi|224461045|gb|GG657759.1| GENE 1514 1570935 - 1571069 188 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDFEEELKKFQPSVEVEDIEDAVYQEDLTDMTDILKEMIEQTK >gi|224461045|gb|GG657759.1| GENE 1515 1571062 - 1572369 1221 435 aa, chain - ## HITS:1 COG:BS_folC KEGG:ns NR:ns ## COG: BS_folC COG0285 # Protein_GI_number: 16079860 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Bacillus subtilis # 3 353 5 358 430 228 38.0 1e-59 MNYEQAAAYIEELPKFTKKHTLDHTREFLKRLGNPGEDRKIIHVAGTNGKGSVCAYIQAI LMAEGKKTGFFTSPHLVSINERIRVDNVPVDDEAFLGVFCQVMEAVEGMKKDGIAHPSYF EFLYGMAMKAFAAADVEYIVLETGLGGRLDATNSAGHPCLTVITSISLDHTDILGDTIEK IAAEKAGIIKEGVPLIFDGNSRAASNILRKTAEEKNAPCREISKNAYEILEVGRKSIAFC RSNAYDKDVTWKMPVCGIYQVMNAVLALEAAEYLFSDQHVSREKWQKALASVKWQGRMEE AAPHVTIDGAHNPGAVEAFAETVRVLEEGKTARPVIVFSAVEDKNYEQMISCLCGSLDAS AYIVTEIEDKRRVPALELGQVFEKYTDKKVIIKKELRDALDAARDMRGEGEIYCLGSLYL AGMVKKLLAGGEEHA >gi|224461045|gb|GG657759.1| GENE 1516 1572381 - 1574528 2177 715 aa, chain - ## HITS:1 COG:SMc00195 KEGG:ns NR:ns ## COG: SMc00195 COG1368 # Protein_GI_number: 15965601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Sinorhizobium meliloti # 222 591 222 622 639 128 26.0 4e-29 MNKEDVKAYWKARKERRAMIIEQRRNSAFARKMKPVYKFMNRFSLLFHALLACVLNIVIE AISRHSLFEALDYMTGTPMVFLYNAFMIFITFSIVYLFRRRVFVRILISVFWLILGVANG YMLLKRVTPFNAQDLKVAKDGLSLINNYFNGFELIVLAIGIVSVVIWVVSMWKRGGQFEG KVHHVWALLGIIVCFAAYGLFSNLAVEKRVVSTYFGNIAFAYEDYGLPYCFMASVFNTGI TEPNDYNKKTIEKISNNGEITKNETGRSEDELPNIIFIQLESYFDVAEAEFFTTSEDASP NLHEMYKKYSSGYFKVPSVGAGTANTEFEVLTGMNLRYFGPGEYPYKTVLKNQTAESAAT ALAALGYGAHALHNNGGNFYSRANVFNNIGFDSFTSKEFMNILQTTENGWAKDDILIQHI IDAMNTTEQRDFVFGVSVQGHGDYPEEQIIENPKIKVEGIEDEGLKNKWEYYVNQVYEMD KFAGDLVKTLEERGEPTVVVFYGDHLPTMGLKAEDLKSRYLYNTNYVIWDNIGLQKEDRN IPSYQIMADVFDRLDIHSGTVFNYHQERRKTKNYLSDLELLQYDILYGKQYVYNGKEPIT EGHMQMGVKDVTLTNVVKHLNEGCSLYGENFTRHSKIFINGEKQKSTFLNNTRIDLPETV PEDGDVITVVQMGSSNTPFRTSNEYVYQDGTLTVREGTGTDPEKSWTEQTDSSEE >gi|224461045|gb|GG657759.1| GENE 1517 1574595 - 1577252 2778 885 aa, chain - ## HITS:1 COG:CAC2399 KEGG:ns NR:ns ## COG: CAC2399 COG0525 # Protein_GI_number: 15895665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 5 881 7 881 881 1090 58.0 0 MSQNLETTYNPKEIEPKLYEKWCESKYFHAEVDRSRKPFTTVMPPPNITGRLHMGHALDN TLQDILIRYKRMQGYNALWIPGTDHAAISTEVKVTNQLKEEGIDKKELGREKFLERTWQW KEEYAGTIEGQLKKLGVSCDWDRERFTMDDGCSEAVEEVFIKLYEEGYIYKGSRIINWCP VCKTSLSDAEVEHEEQDGSFWHVKYPIVGTEDFLEIATTRPETMLGDTAIAVHPDDERYK DIVGKTALLPLVNREIPIVADYYVDKEFGTGAVKITPAHDPNDFEVGKRHDLPEINVMND DATINENGGAYAGLERYEARKRIVRDLEEQGYLVKVVPHSHNVGTHDRCHTTVEPLIKQQ WFVKMEELAKPAIEAVKTGELKFVPERFDKIYLHWLENIRDWCISRQIWWGHRIPAYYCD ECGEFVVARQMPETCPHCGCTHFTQDEDTLDTWFSSALWPFSTLGWPKQNEDLDYFYPTD VLVTGYDIIFFWVIRMVFSGYAHTGKSPFHTVFIHGLVRDSLGRKMSKSLGNGIDPLEII EQYGADALRMTLVTGNAPGNDMRFYNERVEASRNFANKVWNASRFILMNIEGKEITEPEA SELLPGDRWILSKCNRLIREMTENMDKFELGIALQKVYDFIWDEFCDWYIEIAKQRIYRA EEEPESANAALWVLKTVLKDALKLLHPFMPFVSEEIYGKLVPEEESLMMSAWPKYREDRN YPEAEDVAEHLKAVISGVRNIRAEMNVPAARKTKIYVVSEDEKLCHGLDMLKDSIIRMSC ASDFIIQHNKDGIAEDAVSVVVPDATAYVPLSELVDFEQEIERLTKEEARLTKEIARATG MLNNEKFMSKAPEAKVQEEKDKLVKYQQMLEQVKERLEGLKSRQS >gi|224461045|gb|GG657759.1| GENE 1518 1578177 - 1579166 318 329 aa, chain - ## HITS:1 COG:no KEGG:HS_1632 NR:ns ## KEGG: HS_1632 # Name: not_defined # Def: large adhesin # Organism: H.somnus # Pathway: not_defined # 57 174 1634 1754 2914 127 59.0 5e-28 MEENTSFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGASGNWYIGDTDSGVSATGP KGDKGDRGEAGPMGPQGATGATGPQGLTGPQGLTGPQGPTGATGPQGATGPKGDTGAAGP QGPTGATGPKGDPGASGVQGPKGDKGDTGAAGPQGPQGIQGPKGDKGDQGPSGPVNIANN LETTEEGYALDARQGKILKDKLDFEVGTWTPISKLHNLGVTEVTSSHYIKVGRLVYVYCT CKLLHSSQSSSIMSLQGLPYESQNTAVLGLGVSTLTNIKQRPYIPYIENSSIKFADTFGG RTWANMASQDFVTGSGLTLSFSGCYLAKF >gi|224461045|gb|GG657759.1| GENE 1519 1579354 - 1580247 772 297 aa, chain - ## HITS:1 COG:YPO2874 KEGG:ns NR:ns ## COG: YPO2874 COG0679 # Protein_GI_number: 16123066 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Yersinia pestis # 13 297 32 318 318 108 29.0 9e-24 MLLGLFLKYIGWIDDDFAAKMNRFVFLVPLPVLVFNDLATVDFRQVWDVRFVLFCLLATV VSIAISTAVSFLWRDRSIQGEFIQSSYRSSAALLGIAFIQNIYGTAGMAPLMIIGSVPLY NVMAVAMLSTFSPERGKLNGTVWRQTLRGIITNPIIIGIAAGLMWSVLKIPMPHVMEKTV SNVAGMATPMGLIAMGASFDIKKAFAKVKPSLTAAALKLIGFCSLFLPVAIQMGFREEKL VAILVMLGSATTVSCFVMAKNMGHEGVLSSSVIMLTTFLSAFTLTGWLYILKSLGML >gi|224461045|gb|GG657759.1| GENE 1520 1580381 - 1581184 619 267 aa, chain - ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 2 264 6 259 266 223 45.0 3e-58 MNKEEKTEYLIDQLRAENAGYEALSMPVDLPGKRRLLRSLMNVRFPGPVSPEILKVQDEL LQEELEEKGIVDVMELPVIQDEYPCTEIKNSRRIVLWQGDITRLKADAIVNAANSQMMGC FVPCHGCIDNAIHSAAGLQLRNECAQIMEEQGHEEPTGKAKITGGYNLPAEHVIHTVGPI VGVQVTEEQKEQLKSCYKSCLKLAEKQGLRSIAFCCISTGEFHFPNKLAAEIAVQVIDKY LSTSEVERIVINVYKNEDYYIYKKLFQ >gi|224461045|gb|GG657759.1| GENE 1521 1581210 - 1581704 405 164 aa, chain - ## HITS:1 COG:Cj1254 KEGG:ns NR:ns ## COG: Cj1254 COG3663 # Protein_GI_number: 15792578 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Campylobacter jejuni # 3 163 2 158 160 152 45.0 2e-37 MQTEYIVHNFQPIYNEHSRILMLGTMPSPKSREVGFYYGHPRNRFWKVVSDVCRAPLPQT PEEKTAFALEYKIAVWDVLAGCEIKGADDSSIRNPVANDLDVILKHAKIQAVFTTGTKAG QLYKKYCLPKNGISAVTLPSTSPANCRMTYEELFEAYSVIKQYL >gi|224461045|gb|GG657759.1| GENE 1522 1581982 - 1583022 804 346 aa, chain + ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 3 341 6 339 350 290 41.0 3e-78 MKELIDKLKENRTLSKREWVALIEGRSPALADYLYDAARSVRHRYYGHDVYVRGLIEFTN YCRNDCLYCGIRKSNSNVSRYRLTEEQILSCCDTGYQLGFRTFVLQGGEDGCYDDSRLGS IISDIKTRWPDCALTLSIGERSYDSYQYLYDAGADRYLLRHETFNAGHYARLHPPLLKAE VRQECLWNLKKIGYQVGTGFMVGSPYQTAEHLAEDMLFIKKLDPQMIGIGPFISHHDTPF AGHPSGTLELTLFMLGLLRLMIPKVLLPATTALGTIHPKGRELGILAGANVVMPNLSPTT VRKDYALYDNKICTGDEAAECRNCLERRMESIGYHVVTARGDSLNI >gi|224461045|gb|GG657759.1| GENE 1523 1583060 - 1584481 1365 473 aa, chain + ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 1 473 1 472 472 700 73.0 0 MYDVNSKHADDFINHDEIQATLDYADENKNNLELIESLIEKAKLQKGLTHREASVLLACE DADMNEKIFRLAEQIKKDFYGNRIVLFAPLYLSNYCINGCTYCPYHMKNKHIARKKLSQD EIRKEVIALQDMGHKRLALEAGEDPVHNTMEYYLDCINTIYSIKHKNGAIRRVNINIAAT TVDNYRLLKEAGIGTYILFQETYHKESYLQLHPTGPKHDYNYHTEAMDRAMEGGIDDVGV GVLFGLDKFRYEFAGLLMHAEHLEAAFGVGPHTISVPRLRNADDIDADSFTNGIDDDTFA KIVACIRIAVPYTGMIISTRESQKTRERVLHLGISQISGGSRTSVGGYCEPEPEDEKSEQ FDVIDNRTLDEVVRWLMEMDYLPSFCTACYREGRTGDRFMSLCKSGQIQNCCHPNALMTL EEYLMDYASPETKAIGDKLIDKEVLNVPNEKARQVVLENLRLIRENNRRDFRF >gi|224461045|gb|GG657759.1| GENE 1524 1584584 - 1585798 982 404 aa, chain + ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 3 402 4 399 411 428 56.0 1e-120 MSLNSTPSSERIHIGIFGKRNAGKSSVINALTGQDLAIVSDIKGTTTDPVLKAMELLPLG PVVMIDTPGLDDEGELGTLRVQKAYQILNKTDIAVLVVDGTVGMTEADHAILKRIKEKKL PSVVVLNKADIAVPDRYKDAASLGLAPDDYFMWVSASDNSNIYELKELIARLVPADDPKS KIVGGLIRPSDFIILVVPIDKAAPKGRLILPQQQTIRDILEADAAAIVIKENELSNTLMT LGKKPAMVITDSQVFDKVSKETPADIPLTSFSILFARYKGNLSTVVDGARTLECLKDGDT VLIAEGCTHHRQCDDIGTVKLPRLIQKYTGKQINFEFTSGTEFPLDLSTYNLIIHCGGCT LNEREMKYRLKCAEDAGIPITNYGIAIAQMNGILERSIELFPEF >gi|224461045|gb|GG657759.1| GENE 1525 1585994 - 1586593 392 199 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 29 165 3 135 270 99 36.0 4e-21 MNTTAKKIENTVLSLHPFSELNYERSYSIDSLILMFFAFSGIGWIWEVILHIIEDGMIIN RGVMTGPWLPIYGMGGVLILVVLKKFRARPMQLFGTIMCLCGVIEYVTSIVLESLFGARW WDYSDMLLSIDGRVCLEGLMIFGIGGLFFIYIIAPKMDDLLTRFSSKSKIIVCVFLLAVF LGDLVHMFIAPNMGFGITS >gi|224461045|gb|GG657759.1| GENE 1526 1586664 - 1586921 399 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569439|ref|ZP_03778464.1| ## NR: gi|225569439|ref|ZP_03778464.1| hypothetical protein CLOHYLEM_05524 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07861 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07861 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05524 [Clostridium hylemonae DSM 15053] # 1 85 1 85 85 155 100.0 1e-36 MKKNTKEELLAVIASKAGCNYLSDVILPIYSEKVLAAIESIDENEYDLKEWQETVGYIIG NNTIQINDCKDAKEYLIHKLWKRGL >gi|224461045|gb|GG657759.1| GENE 1527 1587113 - 1587748 667 211 aa, chain - ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 7 155 4 149 199 102 42.0 7e-22 MNKKCYGYVRVSSKEQNIGRQIAALEKIPVPPENIFIDKQSGKDFDRPNYQKMIDKLCAG DVVFVKSIDRLGRNYDEIIEQWRVLTKAKDVDIVVIDFPLLDTRNQVNGLTGKFIADIVL QILSYVAQIERENIRQRQAEGIAVAKSKGVSFGRPAKEIPEEFPHVFELWRQGKISMRRA AKIMGTNHTTVSKWIKLYMKENDIFLGDKTI >gi|224461045|gb|GG657759.1| GENE 1528 1588018 - 1588746 778 242 aa, chain - ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 3 235 5 241 245 313 65.0 1e-85 MDEAVKKLQDIIDESSRIVFFGGAGVSTESNIPDFRSADGLYRQKYKYSPEQIVSHSFFV KNTEDFYEFYREKMMFLDAEPNPAHLKLAELEAAGKLTAVVTQNIDGLHQAAGSRNVLEL HGSIHRNYCRKCGKFFDASYVKHAGGVPKCECGGLIKPDVVLYEESLDSTVISRSVQAIS EADTLIIGGTSLIVYPAAGFIDYFSGRHLVVINKSATAKEVGADLTIAAPIGEVLGQIEV HE >gi|224461045|gb|GG657759.1| GENE 1529 1588900 - 1589568 663 222 aa, chain - ## HITS:1 COG:alr0288 KEGG:ns NR:ns ## COG: alr0288 COG0637 # Protein_GI_number: 17227784 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Nostoc sp. PCC 7120 # 2 187 5 190 222 107 30.0 3e-23 MVKGVIFDMDGTMFDTEHLSTVTWQMTGEKLKLDINDKLIESFRGGNPAQIRKLFHEALG PDVDYDHVKEVKHAFFEMLTEKDGIPIKKGLFELMDYLREEKIPMAVATSTARARAENII RRAGAYEYLSACVCGDAVEKSKPEPDIFWKAAEELGCSPKECLVLEDSTAGVLAGKAAGG YIIYIPDETDVPAEVLDGITGRMDSLLDVIGWIKAVNRKRER >gi|224461045|gb|GG657759.1| GENE 1530 1589732 - 1590208 630 158 aa, chain - ## HITS:1 COG:CAC3579 KEGG:ns NR:ns ## COG: CAC3579 COG1846 # Protein_GI_number: 15896813 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 142 1 142 154 110 44.0 8e-25 MENAYKTINHILVNLINEIWELEEKAIITEEFKDLTNNDMHVIEAVGLGEGNNMSAIARK LGITVGSLTTAMNSLVNKKYVERRRSEEDRRVVYVKLTNKGVGAYRHHEDYHRQMTQAIL DKLGEDEIPVLVKTLDALDEFFCGYSQRRDSQAEGREG >gi|224461045|gb|GG657759.1| GENE 1531 1590254 - 1591321 986 355 aa, chain - ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 353 1 350 355 367 50.0 1e-101 MKTAPLIMGNIKAELPVIQGGMGVGISLGGLAAAVAKEGGVGIISAAQIGFREADFDRNT LEANLRAMKKEYVKARRIAPEGVIGFNIMVAMRHYDAYVRAAIEAGADLIISGAGLPTEL PRIAGDAEIKLAPIVSTDKSAQVILKYWDRKYARVPDLLVIEGPQAGGHLGFTKEQLEMY DSEAYDAEILKILDTVKKYEHKYGRKIPVAVAGGIETAAQAAHAFSLGADAVQVASRFVT TEECDADIRYKEAYLKAEREDVVIVKSPVGMPGRAIKNAFMERVMSGEQIPHSPCHGCLH KCRPDEIPYCITDALVHAAKGEVEDALLFCGANAYKADRIETVKEVIDSLLPEKV >gi|224461045|gb|GG657759.1| GENE 1532 1591332 - 1593044 1551 570 aa, chain - ## HITS:1 COG:CAC3568 KEGG:ns NR:ns ## COG: CAC3568 COG0825 # Protein_GI_number: 15896802 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Clostridium acetobutylicum # 307 570 2 265 274 335 58.0 1e-91 MKLENMFKKTRLSSSRKSYISLKEARPEVPQGLLRKCNKCGGAIITEDVKAGSYICPKCG GYFRVHAYRRIEMTADEGTFEEWDRGLTTRNPLDYKGYEEKLDQLKEKTGLEEAVVTGKA CIDGTETVIGVCDGRFLMASMGEVVGEKIARAVERATKEKLPVILFACSGGARMQEGITS LMQMAKTSAALKRHSDAGGLYISVLTDPTTGGVTASFAMLGDIILAEPGALIGFAGPRVI EQTIGQKLPKGFQRSEFLLEHGFIDGIVERPQMKDTLSRILKLHASGTETAGSCADDTAG AEVSTAQHNKVASAWDRVELSRMKDRPVGEDYIQAMFTDFIEFHGDRCFADDKAVIGGVG RFNGRPVTVIAQAKGTNTKENIERNFGMPSPDGYRKALRLMKQAEKFGRPVICFVDTPGA FCGLEAEERGQGEAIARSIYEMSALRVPVLSIIIGEGGSGGALAMATSDEVWMLENSVYS ILSPEGFASILWKDSTRAKEAAEVMKLTAGDLLQARIVEQIVKEPGHYTVQNMKEVTSKL KKYMERFLGTYGQMSEEELTEHRYMRFRRM >gi|224461045|gb|GG657759.1| GENE 1533 1593057 - 1594391 1535 444 aa, chain - ## HITS:1 COG:CAC3570 KEGG:ns NR:ns ## COG: CAC3570 COG0439 # Protein_GI_number: 15896804 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Clostridium acetobutylicum # 1 443 1 443 447 561 61.0 1e-159 MIKKILIANRGEIAVRIIRACREMGIETVAVYSEADKDALHTQLADEAVCIGPAPSSDSY LSMDRIISATIITGADAIHPGFGFLSENSKFAELCEQCSITFIGPDSKVIARLGNKQEAR NTMTAAGVPVIPGSTEPIFDAETGAAAADEIGYPVIVKAALGGGGKGMRVAETPADFLQA FQTAQKETQMAFGDNTMYIEHFVQQPRHIEFQILADSQGHVIHLGERDCSIQRNHQKMIE ESPSVALDDGLRKKMGDAAVKAAKAAGYVNAGTIEFLLEKSGNFYFMEMNTRIQVEHPVT EWVTGIDLIKEQIRIASGRPLSYTQDEIQLTGHAIECRINAENPSKGFRPSPGTITDMYL PGGKGIRIDSAIYSGYTIPPYYDSMVAKLIVWAKNRKEAIRKMQSALGEVIIEGIDTNVD YQYDILSHPDYQAGNIDIEFIEKM >gi|224461045|gb|GG657759.1| GENE 1534 1594401 - 1594820 447 139 aa, chain - ## HITS:1 COG:BH3735 KEGG:ns NR:ns ## COG: BH3735 COG0764 # Protein_GI_number: 15616297 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Bacillus halodurans # 1 138 2 139 140 172 60.0 2e-43 MDISQIKEIIPHRHPFLLVDYIEDYEPGQYAVGYKCVTYREDFFAGHFPQEPVMPGVLTV EALAQVGAVAILSQEECKGKIAYFGGINKCKFKGKIVPGDKVRLETKIIKQKGPVGVGEA TASVDGKTVVSAELTFMIG >gi|224461045|gb|GG657759.1| GENE 1535 1594851 - 1595318 533 155 aa, chain - ## HITS:1 COG:RSc2786 KEGG:ns NR:ns ## COG: RSc2786 COG0511 # Protein_GI_number: 17547505 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Ralstonia solanacearum # 1 154 1 154 155 106 44.0 2e-23 MEFENLLSLIEAVSESELTGLKYEENGVRLHLTKKQDKIQVVTAEPAAVTGTAAADSEGG ALWGAAAQNEAKMPARADGSIVESPLVGTFYTAPSEESPAFVSVGDTVKKGQTLAIVEAM KLMNEIESDYDGTVTEILAENGQPVEYGQPLFRIC >gi|224461045|gb|GG657759.1| GENE 1536 1595335 - 1596573 1221 412 aa, chain - ## HITS:1 COG:CAC3573 KEGG:ns NR:ns ## COG: CAC3573 COG0304 # Protein_GI_number: 15896807 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Clostridium acetobutylicum # 1 411 1 411 411 457 56.0 1e-128 MKKRVVVTGLGAVTPIGNSVEEFWSGVKESKVGIGEITKFDTTEYKVKLAAEVKDFSAKE YMDFKAAKRMELFSQYAVAAALEAYEDSGVDIEKEDPYRAGVIVGSGIGSLQRVEQEHTK IREKGPGRVNPLMVPLMISNMAAGNISIQLGFKGKCTNVVTACASGTNCIGDAYRAIQYG DADMMIAGGTESCICPTGVAGFTSLTALSTSTDPKRASIPFDRDRDGFVLGEGAGVVMLE ELEHAKRRGADIYAEVVGYGSTGDAYHITSPAEDGSGAAKAMSLAMEEGGIEPAQVDYIN AHGTSTHHNDLFETRAIELALGDAAKDVVVNSTKSMIGHLLGAAGGVEFITCVKSIQDGY IHQTVGTENVDENCGLNYAVGAPVEKDLTYVLTNSLGFGGHNATLLVRKYEG >gi|224461045|gb|GG657759.1| GENE 1537 1596606 - 1597343 236 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 241 1 238 242 95 32 1e-17 MEGKVALVTGGSRGIGRAIALALADGGATVVINYNGSRDKAMDLKQEIESKGGRAEIYQC NVSDFAKCEELIQGIVKQFGSLDILVNNAGITKDGLLMKMTEEDFDQVIDVNLKGAFNTI RFASRQMLKQKSGRIINLSSVVGVAGNAGQANYASSKAGVIGLTKAAAKELASRGITVNA IAPGFIETDMTDALPEKVKEASVSQIPLARFGKAEEVAALAAFLASEAAGYITGQVIHVD GGMVM >gi|224461045|gb|GG657759.1| GENE 1538 1597328 - 1598305 1180 325 aa, chain - ## HITS:1 COG:CAC3575 KEGG:ns NR:ns ## COG: CAC3575 COG0331 # Protein_GI_number: 15896809 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Clostridium acetobutylicum # 1 312 1 306 308 283 46.0 3e-76 MSKIAFIYPGQGAQKAGMGADFYEKSPVARDIYDRASDALGLDMKALCFEENEKLDLTEY TQAALVTTCLAITEALKDVTEGAGHTYGSGNLTPSVTAGLSLGEYCAIAAAGGMDVIDAV RLVRKRGILMQNTVPAGEGAMAAILGMTGEAIEHVLDGMDNVTIANYNCPGQIVITGETK AVEAACAALKEAGAKRAVALNVSGPFHSPMLRDAGNRLAEELEAVELSKLRIPYVTNVTA EKVADIADTKALLARQVSMPVRWQQCVETMTADKVDTFIEIGPGRTLAGFMRKINRDVEV YNIAEWSDIEKVISEIEGETAWKEK >gi|224461045|gb|GG657759.1| GENE 1539 1598298 - 1599236 1258 312 aa, chain - ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 305 2 306 310 391 66.0 1e-109 MKTEVTRLLGIEYPIIQGGMAWVAEYHLAAGVSEAGGLGLIGAASAPADWVRDQVREAKK LTDKPFGVNIMLMSPYADEVAKVIVEEGVKVVTTGAGNPEKYMKMWKEAGVKVIPVVASV ALAKRMERCGADAVVAEGCEAGGHIGENTTMVLVPQIVDAVNIPVIAAGGIADGRGAAAA FMLGAQGIQMGTHFVVTDESIVHDNYKERIIKAKDIDSRVTGRTTGHPVRALRNEMTKKY IELENSGASFEELEHLTLGGLRKAVVDGDVKNGSVMAGQIAGMVKERMSCKELIQKLVSE TDALIKGAEVYE >gi|224461045|gb|GG657759.1| GENE 1540 1599264 - 1599467 356 67 aa, chain - ## HITS:1 COG:NMA0043 KEGG:ns NR:ns ## COG: NMA0043 COG0236 # Protein_GI_number: 15793075 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Neisseria meningitidis Z2491 # 1 66 11 76 78 65 60.0 2e-11 MVADNLGVEESTITEASSFKDDLGADSLDLFELMMALEEEFGVEIPTEDLEQIVTVGDVI KYVEAHK >gi|224461045|gb|GG657759.1| GENE 1541 1599577 - 1600539 993 320 aa, chain - ## HITS:1 COG:CAC3578 KEGG:ns NR:ns ## COG: CAC3578 COG0332 # Protein_GI_number: 15896812 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Clostridium acetobutylicum # 5 320 6 323 325 283 45.0 3e-76 MTGTICGTGSYAPSYTMDNNDIAKLVETSDEWIRERTGVERRHIAGKETTVSMAVEAGRR ALANAGTAPEEVDLILVSTISSNVLLPCAACEVQKELGAVKATGFDLGGAACSGFVFAYN TAMAFLASGVYRTVLVIGSETLSNITNWKDRGTCILFGDGAGAAVLKASEGQMYRPVTHS DGAKGAALTCESRYTKNWKEIPEENTYMKMDGQAVFKFAVRRVPEVIGEVLEANSVAPGD ISCYILHQANRRIVEAVAKRLGEPVEKFPMNLQEYGNTSSASIPILLDELNQSGALKKGQ KIVLAGFGAGLSWGASVLEW >gi|224461045|gb|GG657759.1| GENE 1542 1600702 - 1601214 202 170 aa, chain - ## HITS:1 COG:no KEGG:Acfer_0575 NR:ns ## KEGG: Acfer_0575 # Name: not_defined # Def: heteropolysaccharide repeat-containing protein # Organism: A.fermentans # Pathway: not_defined # 3 163 300 461 467 99 37.0 6e-20 MGLFGCMIFYYPMTKLLIWWLPQYEASMGYAAFLLPICVYECKSSILVSTYLKTLREEKI LFRINLVSVVLAAILSIVTIYIMDSLIGAMLSILIVLAYRCCAGEIKISKIMKKNCAKSM ITETVMVVTFVLSGSLMAWSGVVLFTVMYILFLFIFRGEVKEIRNLLFRK >gi|224461045|gb|GG657759.1| GENE 1543 1601261 - 1601548 226 95 aa, chain - ## HITS:1 COG:no KEGG:BC5266 NR:ns ## KEGG: BC5266 # Name: not_defined # Def: heteropolysaccharide repeat-containing protein # Organism: B.cereus # Pathway: not_defined # 1 93 188 280 473 70 40.0 3e-11 MVYVMFCCKDIMFFKKRNIQLAVTEGKKAIQSGYKLLFATLAGTVIIGITRWCIENHWNI TTFAEVTLTISIANVFLQCINAVAVTTFSCFTKDR >gi|224461045|gb|GG657759.1| GENE 1544 1602124 - 1602411 71 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569457|ref|ZP_03778482.1| ## NR: gi|225569457|ref|ZP_03778482.1| hypothetical protein CLOHYLEM_05542 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05542 [Clostridium hylemonae DSM 15053] # 1 95 292 386 386 194 100.0 2e-48 MVFTDSFHGLCFSLLLHRQFVVLDRTDTSGRKTVNNNRQQGLLEKVGLLEHKTNASLDNF EKILNKEIDWSYIDEQLRIQREHSLQYLRSNTQKG >gi|224461045|gb|GG657759.1| GENE 1545 1603309 - 1604382 335 357 aa, chain - ## HITS:1 COG:no KEGG:CPF_0915 NR:ns ## KEGG: CPF_0915 # Name: not_defined # Def: putative polysaccharide polymerase protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 43 356 45 357 358 80 25.0 1e-13 MTVYIVIFILVSIMAINGCNRRQYKLAGVDVAFWGAVIFPAAIAVLRGITVGADTKNYYA YYEDIVQLHTWKDLSYYADKYLIETGYMIYNKILGFFFESGQTITICNSILLFIALTVMI KKYSLKPILSLFLYITLGIYQTALNMIPSNIASLIVIGGFCFILERKLWKFLLIIVLAMQ MHQSVFIFIALYILHSIKLTRFRAVLLFGAGGIVLMLYDRLLPVISLFVPDVYQRYLMTS QITNGVVFGFHILIFIFILVVTDFRKAGSSFNLYLWAFIMELEFYWLSFRLEIFSRVSFL FSPVLILLVPFVTDNMRFVKNKKLINGIFYTLIGVQYVLRLSINNIGSTMPYMFFWQ >gi|224461045|gb|GG657759.1| GENE 1546 1604386 - 1604769 279 127 aa, chain - ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 88 96 180 183 63 43.0 1e-10 MGDNVHVATGVSFVNHDITSFMFEWQENREYTVRLGCIEIGNNVFIGCNATILYDTVIGD NVIVAAGSVVTGNIPDGTVVGGVPAKVIGDYESYKEKITNYTKCVPWKGDEKNQKLQQEW FWKRHRG >gi|224461045|gb|GG657759.1| GENE 1547 1604941 - 1605996 484 351 aa, chain - ## HITS:1 COG:VC0925 KEGG:ns NR:ns ## COG: VC0925 COG0438 # Protein_GI_number: 15640941 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Vibrio cholerae # 176 351 183 361 365 62 28.0 2e-09 MRVAIISFSDNVDHQEIIYSLYREIENKSNIYTIGIRDPKFIAEFDNHNLFVNAPKRPGI SKGTFNIREYLKLLRIIRQLHIDTIYFESLHVWNLPLLILLRKVKKFHVIHDIIPHEGDR QEKVLKVFNRLIGIFSNYVVVHNRKYIDYLSKEYKVKFSNIKFIDIYKDFGKYTPLQQTK RVLFLGRINLYKGVEYLEEIIKECPGLSFDIVGRATEETDVYINNIKKYNNVNLTLGYVT NEEYYKHLREAELIILPYRTATQSGVVIDAYKASRYVVAFDVGAIGEQIKNHISGELIES GNIKKFSQALNDFFELTFEERKKRSLAAWDYGMNKFSIQNNVQEWIKLINE >gi|224461045|gb|GG657759.1| GENE 1548 1606014 - 1606982 571 322 aa, chain - ## HITS:1 COG:MT0121 KEGG:ns NR:ns ## COG: MT0121 COG0451 # Protein_GI_number: 15839493 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Mycobacterium tuberculosis CDC1551 # 1 320 1 311 318 253 43.0 2e-67 MTVLVTGAGGMVGSHLIEIMKLEGIEVVGTYYKPTVDLNEISNCVNLIECDIRYPKNIER IIRQYMPEQIYHLAAQSYPTVSWEKPYETMDVNVGGTIAVFEAIKELRKTYPNYNPIVIV ACSSAEYGKTLEEIEDEKVKENAQLKPLHPYGVSKVGQDLISYQYFANDNIRTIRARIFN TTGTRKKNDVTSDFTNRAIRQYCENKKNPVLTVGNIYTKRAIMDVKDLITALRSLAEKGV AGEVYNISSERVYEISQIIEIIEQQLGIHFELRVDEKLLRPTDEKIIVGDVKKLKEATGW KQQINLEQTIKEMLEYWKDKYN >gi|224461045|gb|GG657759.1| GENE 1549 1606998 - 1607588 233 196 aa, chain - ## HITS:1 COG:sll0083 KEGG:ns NR:ns ## COG: sll0083 COG0279 # Protein_GI_number: 16331751 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Synechocystis # 9 196 24 185 194 119 35.0 3e-27 MLGIVEKEIEEVFDILKNCYKRGGKLLIGGNGGSAADAEHIVGELMKGFKSQRTIASDMQ EKLCNVDKDMGRVLADDLQGALPAIALGNHLALNSAFANDVDGDQVYAQQVWGYGKKEDV LWAISTSGNACNIKYAIVTAKAKGMTVVGLTGKDGGYLGEKADVSIIVPESETYLVQELH LPIYHCLCLMLEDEFF >gi|224461045|gb|GG657759.1| GENE 1550 1607642 - 1608886 253 414 aa, chain - ## HITS:1 COG:aq_718_1 KEGG:ns NR:ns ## COG: aq_718_1 COG1208 # Protein_GI_number: 15606116 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Aquifex aeolicus # 1 307 6 320 384 166 31.0 6e-41 MAGGMGTRIASINSSVPKPMITVLEKPILEYQIECLKKQGYKDIIIIIGYKGEQIQAYFG NGAAFGVTINYIVEESPLGTAGALYLLKNKIVEDFILINGDIIFDIDIGRFVRYHKQKRG KATIFIHPNDHPFDSGLIRSDKEGRVLEWLCKEDERKWYKNRVNAGIHILSSQVLDKITE FKKMDLDRDILKNLISEGMLYAYDSPEYVKDMGTPERLAEVKADILSGKVKERNLKEKQK AIFLDRDGTINEYVGFLKHIDDFKLKAGVCEAVRCINESGYLAVVVTNQPVVARGEVTVD ELEEIHNKMETLLGTERAYVDAIFFCPHHPDRGYEGEVPEYKVKCECRKPSPGLLLRAAK EYNIDLNQSWMIGDSEIDVEAGIAAGCKVVKLGEGEKYSDLLCCVKDILPPLRD >gi|224461045|gb|GG657759.1| GENE 1551 1608898 - 1609902 478 334 aa, chain - ## HITS:1 COG:slr0862 KEGG:ns NR:ns ## COG: slr0862 COG2605 # Protein_GI_number: 16330397 # Func_class: R General function prediction only # Function: Predicted kinase related to galactokinase and mevalonate kinase # Organism: Synechocystis # 1 313 10 325 326 204 38.0 3e-52 MSFFGGGTDFPEFYLEHGGAVLSTSFNKYCYVNVRHLPRFFDYTSELVYSKIERVTDISK IEHPAIREAMKYLEMYELRLSYEGDLPARSGLGTSSSFSVGMLNAFYALKGKRVDKRTLA DDAIYLERSLCAEAGGIQDQIAASFGGFNRINFGADGYRVNPVILQLERKKELNNRLMLF FTGFSRFSSDIQKEAQLSIETKINQLLEMLQLVDEAEKVLTTKSGLSEFGKLLDYTWKLK RNMSSKVSTEAIDLCYEKAKSAGAVGGKLLGAGGGGFLLFYVEPEYQNQVKEILKDFLYI PFEFEDEGTRVIYYAPESFDLEGVRQYSGRGDME >gi|224461045|gb|GG657759.1| GENE 1552 1609951 - 1610919 232 322 aa, chain - ## HITS:1 COG:CAC2330 KEGG:ns NR:ns ## COG: CAC2330 COG2148 # Protein_GI_number: 15895597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 5 307 141 443 461 202 41.0 8e-52 MLPIQTTIIYGKNDYERLVKKIEALKKIHIVAGCFAEKEIKSELEQYLNKCQKVYLYEVS NSCKKYFINYCENKNVELYITRDIEEILTSEYEISHSLDIPFMRRRRELVRWYYPFVKRL SDILLSLTGLVLLSPILGIVALCIKLYDGGPVFYKQTRLTEGHKIFEIYKFRSMVVDAEK GGARLASRNDNRITPVGKFIRMTRIDELPQLINIIKGDMSVVGPRPERPEIEAKYLKELP EFELRLKVKAGLTGYAQVFGKYNTTPYDKLRLDLLYINEQSVLLDLKLIVWTIKILFIPE STEGIEEGRKTPSNISGGNRKY >gi|224461045|gb|GG657759.1| GENE 1553 1611375 - 1612817 898 480 aa, chain - ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 71 478 73 479 481 275 39.0 2e-73 MKKHTHTHSSKKKSTHMAGRLITLLQLLLSVVLAVVVFNSGWLPAKYMAVMFGLLILLFA VCFGLQYVKNKIHIVGIVLSVLISAATAAGIFYIMQAAQLMKDVGGATYKTDNMIVVVKK DDPAANLLAAKNYRFGVQTSVDQENNGKMIEDVQKVIGRDMKLEEYDTLQEEAEALLKGR IDAAIYNEAFAGILDDAIEDYSSEIRILYQYGIDTPVEADEADIETPFNIYISGIDVSGP ITTNSRSDVNIIMTVNPSTKKILLTTTPRDYYVPIPDISGEQRDKLTHAGIYGVDVSMNT LERIYGIDISYYARVNFTSLITIVDALGGIDVNSDYEFTAMGSSFKKGVNHLDGDEALAF SRERYSFESGDNQRGKNQEAVLTAILQKAMSPAILTSANEILKNISNCVETNMTQDEMSR MINMQISDGTSWTIESTAATGKGDEQICYSSGEQLLYVMWPDESSVRQIKDRMNSIAEEK >gi|224461045|gb|GG657759.1| GENE 1554 1612833 - 1613537 705 234 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569467|ref|ZP_03778492.1| ## NR: gi|225569467|ref|ZP_03778492.1| hypothetical protein CLOHYLEM_05552 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05552 [Clostridium hylemonae DSM 15053] # 1 234 1 234 234 383 100.0 1e-105 MKERLLALALAAGSAVLALVSFFLYAGHDDKPPEIVVKEMEISYTEGDDYSGLLKGVSAE DDRDGDLSDAVFVYKIVPLENGKAVVYYGVMDSNRNVGTAVRKVKFATGIQAGAPDESSD MPDEKTEGKKDGEDHTPGDKDEASDSEELKPDGVRPVIALNADNAQIKAGGVFDALSYVK GVADDKDDQNTLYRHIHVDGQYDINTAGTYELRFYVSDSEGNTSDVKTFSLTVQ >gi|224461045|gb|GG657759.1| GENE 1555 1613551 - 1614237 748 228 aa, chain - ## HITS:1 COG:SP0349 KEGG:ns NR:ns ## COG: SP0349 COG0489 # Protein_GI_number: 15900278 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Streptococcus pneumoniae TIGR4 # 3 228 5 227 227 166 42.0 2e-41 MQEIYLKNMTKDYRSNEAYKTLRTNVEFSGADNKVIVFTSCTPNEGKSTVSLSLAQSLAE GGKRVLFVDADLRKSVLMGRHKVNGDLKGLSHFLSGQSEVDDIIYKTQEPGLMVIFSGVV PPNPAELLGNKRFSSFITSARKIYDYIIIDAPPLGSVIDSAIAAAVCDAAVLVIAANAIS YKFARVVKEQLEKSNCPILGVVLNKVNMKQNKYYGKYYGKYYGEYGKK >gi|224461045|gb|GG657759.1| GENE 1556 1614252 - 1615025 906 257 aa, chain - ## HITS:1 COG:SP0348 KEGG:ns NR:ns ## COG: SP0348 COG3944 # Protein_GI_number: 15900277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 12 232 3 224 230 135 35.0 8e-32 MNQNSVANREFENDEINIDLTELFLAVWSKIHLVILAGIFMALLAFAGTKMFITPMYSST TKMYVLTKQDSSAGVTYSDIQTGTQLTKDYMELVKSRPVLEQVIAVLNLDMEAEELEETI TAETPVDTRILTIIVENQDPKLAKEIADALRESVSIQITEIMDADSVNTFEEGNLPTEPS SPSLVKNMAIGGLLGLIIALGIIVLIFVLDDTIKTPDDVEHYLGLNVLTSIPIQEGVKKS KKVKGMSARKFVKSMKR >gi|224461045|gb|GG657759.1| GENE 1557 1615012 - 1615749 643 245 aa, chain - ## HITS:1 COG:BS_ywqE KEGG:ns NR:ns ## COG: BS_ywqE COG4464 # Protein_GI_number: 16080677 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Bacillus subtilis # 5 239 2 235 254 132 34.0 5e-31 MGGYIDMHCHILPAVDDGARSVEEMERMLKTAYDDGIRCMIATPHYHPRRGKEHPDVLLE RLKLLRRAAHRIDERFRVYLGTEIYFGQDIPAKLKKGRILSMNRREYILVEFSPSDTYTY IQQGIQQLQMNGYEVILAHVERYECIVENVVFAEHLWEMGAHLQINAGSITGDSGRKIKR FVKELMDRDLVFCVGTDAHGAAHRAPRMKKAADYVEKKYGEDYMRRIFFSNAKIMLKKRV ENESK >gi|224461045|gb|GG657759.1| GENE 1558 1615995 - 1616594 451 199 aa, chain - ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 6 153 4 148 199 94 38.0 2e-19 MSNTFGYIRVSTKDQNEARQLAALAEYHIPRSRLFIDKQSGKDFARPAYQKLLRRIKKSD VLFVKSIDRLGRNYDEILEQWRILTKKIGADVVILDMPLLDTRARGEDLTGTFIADLVLQ ILSYVAQTERENIRQRQAEGIAAAKARGVKFGREKKPLPNGFRETVLKWREKEITCQQAL EQLDVSRSYFFNHVKLLDL >gi|224461045|gb|GG657759.1| GENE 1559 1616674 - 1617540 1038 288 aa, chain - ## HITS:1 COG:BS_ylpA KEGG:ns NR:ns ## COG: BS_ylpA COG1760 # Protein_GI_number: 16078649 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Bacillus subtilis # 3 287 2 286 300 195 42.0 7e-50 MSFQSIEEVRARCEKEEISFWKAVQLEDAAERDVAPEDSWKEMKHMWQAMLDGVDAYEPG LISRSGLVGKEGGLMEEYAKTGEPLCGGYMAKVMTTALKMGCNNACMKRIVAAPTAGACG VLPAVLVTYFREYDVPEERMIEAMYVAAGIGQVIANRAFLAGASGGCQAEIGSGSGMAAA AITYVRGGSFDQIGHACAMALKNLMGLVCDPVGGLVEVPCVKRNVGGAVNAMAAADMSLA GIVSQIPVDQVIDAMREVGEKMDVSLRETGIGGVAGSPRGQEVGKNLQ >gi|224461045|gb|GG657759.1| GENE 1560 1617563 - 1618243 801 226 aa, chain - ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 3 218 5 221 227 184 43.0 1e-46 MGSIFDILGPVMVGPSSSHTAGAVRIGLISTQLFGRRPGRATIYLHGSFAATGKGHGTDR AIVAGLLGMKPDDMRIPGSFEIAAEEGMEFTISEKEIRGAHPNTAQIILEADGAEKMKIE AYSIGGGRIRVSKLDGIDVSFSGESNTLIVRNIDQPGCITEVAASLSEEDIDIATMQVFR DKKGGCAVMVVETDQVVSRDALDRLEGKEGIVNVTFLNVNGSIEEK >gi|224461045|gb|GG657759.1| GENE 1561 1618412 - 1619320 410 302 aa, chain + ## HITS:1 COG:no KEGG:Cthe_1430 NR:ns ## KEGG: Cthe_1430 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 42 286 71 316 337 180 38.0 5e-44 MYFLFPLLLLFLMALAVIFHFRKKRIICKIKCMCTEEKLELLNEITAPFGFSYELCHDVF TSRTDAWQKEFGYSGLYDKNAVHFNMVFDCEPVYFDHNGRTWLIEFWKGQYGINIGSEIG IYQAEDIIPPAERKNVLFHAVPEKDMVSFSVRLFNGTSLLYSLSRRKHWWLAGFSMGCYS VPELLKMEITISFGNRQMMHAFLGGMKKTGYRPGEISICGNSVSFDFDRPKTRQPRMSHL LNSAWALWKDRLFLFLYCRVTKVFCHTLDKLLYLYEYLPFVFRHMMRIHCYSHRRHQRRK RS >gi|224461045|gb|GG657759.1| GENE 1562 1619317 - 1620195 525 292 aa, chain + ## HITS:1 COG:no KEGG:Clocel_1217 NR:ns ## KEGG: Clocel_1217 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulovorans # Pathway: not_defined # 1 292 1 294 299 295 46.0 2e-78 MSTAARLDLAFKNAPVLPLEPDSKYVLFSDCHRGTGTSNDNFLKNQNLYFAALKHYYDRQ FTYIELGDGDELWENRSVEQIKSIHDNTYWLLSLYYRQKRLWMLYGNHDLVKRNPRYSKQ HFSSYICSTNKTEPLFPGVTFYQGLILKDSLGTRDVYLTHGHQADDLNSVLWKLSRFLVR YIWKPLEHIGFLDPTSAAKNNTKKRKTERLLTDWALDNGILIISGHTHRPMIGTKESPYF NTGSCVHPRCITCIEITNRCMTLVKWTLRTRDDMTLYVGREELAGPVCIDEY >gi|224461045|gb|GG657759.1| GENE 1563 1620313 - 1621434 1186 373 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2100 NR:ns ## KEGG: bpr_I2100 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 371 1 372 378 484 61.0 1e-135 MNKKEVLEIRKQFSPENCTITRICGCYVDHEKQKILELKKAFLSMPEDEAFKYFDIFKKT LSGTIGKNLMNMEFPLDQEKPGGTQDFLLKLRDSRLEDEMIVEEFYDKVIENYIYAENYY IILIHAAYDIPGKASDNMEMFDASDEVYEHIMCSICPVNLSKAGLSYNAATNSIEDRIRD WIVDAPAKGFLFPAFQDRSSDIHNILYYSKKPEELQPDFIEHVLGSTIPLTAKDQQETFH AIVSDTLGEECDYEVVRNIHDDLTELIEEHKEAPEPLELSRPDVKRLFEKSGVPDERMES FDRDYEEIIGEKNSLLASNIVNTKTFQIETPDVIVKVNPERSDLVETKLIDGRKCLVIAI DDHLEVNGIEIVK >gi|224461045|gb|GG657759.1| GENE 1564 1621690 - 1622235 433 181 aa, chain - ## HITS:1 COG:SA2335 KEGG:ns NR:ns ## COG: SA2335 COG0350 # Protein_GI_number: 15928126 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Staphylococcus aureus N315 # 1 175 1 167 173 160 48.0 1e-39 MYYSTTYPSPVGMITLACGESGSSLAGLWLEGQKYFGGSIREDMTENNRQPVFDAVKSWL DRYFAGRKPDISELSLAPAGSKFRQEVWRILCEIPYGEVVTYGSIAKRMAEKMGREAMSS QAVGGAVSHNPISIIIPCHRVAGADGSLTGYAGGIQTKVKLLELEGADLSRLYVPGKGSA L >gi|224461045|gb|GG657759.1| GENE 1565 1622311 - 1622904 461 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569479|ref|ZP_03778504.1| ## NR: gi|225569479|ref|ZP_03778504.1| hypothetical protein CLOHYLEM_05565 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05565 [Clostridium hylemonae DSM 15053] # 35 197 1 163 163 274 100.0 2e-72 MPNCCICGRKISDSFLENKYKLPYGLYGCYQCADMFEKIKKAENAEQIQKAQDNIKNKMA ENSASQEAVKAVEEEFKKLEDNRQCMTQRKLEEAEIHREQQARKNKLMVTTGYNFEGYRI SRYIDIVHGEYSVGHFINIDNSLSRAKYAAQEKMIDQAVVKGANAIIGIDFDITSISDVI AAAIVSGTAVVIEKIEE >gi|224461045|gb|GG657759.1| GENE 1566 1623078 - 1623674 674 198 aa, chain - ## HITS:1 COG:no KEGG:FMG_0299 NR:ns ## KEGG: FMG_0299 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 27 181 217 376 384 70 29.0 3e-11 MKAKVLLAVMAAALLLAACQSPAATDKKAEKKDPEARTEEKKEEFGNYGADALNGIKTNT NTIFDQAELTVVNIWDLSCDSCKGEMEALGEIGREYAGKGVQILGIVRGVNADNESEAEA AAAEVNADYVQMIASEEMEKNVLSKYGDAPVTVMVGRDGTVLGDAYAGAKDKEFWNTEIE KYHSKVCVNDHPADCGVG >gi|224461045|gb|GG657759.1| GENE 1567 1623664 - 1623864 190 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569482|ref|ZP_03778507.1| ## NR: gi|225569482|ref|ZP_03778507.1| hypothetical protein CLOHYLEM_05568 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05568 [Clostridium hylemonae DSM 15053] # 3 66 1 64 64 98 100.0 2e-19 MEMSARFADEEEIENLEEIGYRTIPSETGKIVLPGKGVSIADTLKLKLARILWSKRIIVE GLTYEG >gi|224461045|gb|GG657759.1| GENE 1568 1623877 - 1623969 221 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVVMDNSLKEYMEEKQYRDIVVEPTVCNT >gi|224461045|gb|GG657759.1| GENE 1569 1624163 - 1624894 765 243 aa, chain + ## HITS:1 COG:lin2100_2 KEGG:ns NR:ns ## COG: lin2100_2 COG3103 # Protein_GI_number: 16801166 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Listeria innocua # 41 236 143 329 612 71 31.0 2e-12 MKRKKICTVTLAVLSGVVILSLGTFITSFAKEDSSGSQVTTMAATANLNLRDDAGLHGKV ITVMPKGASVEVYSMTSAGWYNVKYKDQTGYAYYVYLNFEGTDKGTVNDGKVTHMYATAP LNVRSKPNTGSAILGSFKKGDAVTVVSKHDGWFKVDFNGKQGYCHGGYLDFGKGDPSVTA DESTMNDMTTSAPLNVRDRPSMKGKIIGSFKKGETVKVIGQEGDWLKVKYKSTTGYSHVD YLK >gi|224461045|gb|GG657759.1| GENE 1570 1624987 - 1625133 194 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKKRQEKQNQKKNLEKFNSVTEKVKPENQNQEHNARKEAVDVKMRQV >gi|224461045|gb|GG657759.1| GENE 1571 1625230 - 1625394 226 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569485|ref|ZP_03778510.1| ## NR: gi|225569485|ref|ZP_03778510.1| hypothetical protein CLOHYLEM_05571 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05571 [Clostridium hylemonae DSM 15053] # 1 54 1 54 54 70 100.0 6e-11 MKDLSELKLDLTPEALRSLADRKSKNRTESTSDITIPFPEELLQKTGQEDKTKG >gi|224461045|gb|GG657759.1| GENE 1572 1625502 - 1626302 595 266 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569486|ref|ZP_03778511.1| ## NR: gi|225569486|ref|ZP_03778511.1| hypothetical protein CLOHYLEM_05572 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05572 [Clostridium hylemonae DSM 15053] # 1 266 26 291 291 439 100.0 1e-122 MNKYIDKDYDKHFDDDFEVIYDALDELDEYIDYDDDYEADAFEDDTYSDDASGEDVQRNR QRPAGRKSRKQDGKNGSSNKSADKKDGRKKSRRNLPNLLSPAAKTVKAGGKAAGSIIRTV LKAASLLLTAIIIVLLAVSFWKGHTVYGNPAAAVAEKNYGLAAYFGFAALLLLFELISFF WILSGQKIKDGRRIRKLDTGRGLCSFVIIYAGSFLSSSFGSLIPEAPQALSGLKGAVTVY GSLDQTLFILCAAGLVSCLVRKFIFH >gi|224461045|gb|GG657759.1| GENE 1573 1626289 - 1627146 965 285 aa, chain - ## HITS:1 COG:no KEGG:Blon_1431 NR:ns ## KEGG: Blon_1431 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 9 273 39 304 358 350 66.0 4e-95 MKKMMNKIKIMGRALKMELREHKSSFMVFVTLRALVILIMILQIFNGNFENVFLCILTLI LLIVPSFVQVNLKIELPTALEIIILLFIFAAEILGEIQAYYIKFPAWDTLLHTLNGFLMA AIGFALVDILNRNERFSIRLSPVFVAIVAFCFSMTIGVIWEFFEFGMDQIFHFDMQKDTI VHTISSVMLDPAGGNHPEVIENITDAAVNGQSLGLGGYLDIGLIDTMKDLLVNFAGAVVF SVIGYFYVKNRGKGKFAKRFIPRLKTKDADFLQQAEAEDEKANEK >gi|224461045|gb|GG657759.1| GENE 1574 1627179 - 1628108 1081 309 aa, chain - ## HITS:1 COG:AF2365 KEGG:ns NR:ns ## COG: AF2365 COG0719 # Protein_GI_number: 11499942 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Archaeoglobus fulgidus # 48 309 84 343 369 82 25.0 8e-16 MGKQLDKIVEKVLEQIDGAGFRQKGAFNLRYNGTALCHGDSEHIKIKKKTDRQGIDIYID ENTNGEQVHIPVVVNATGMKDEVYNDFFVADGADVTIIAGCGIHNSGCNESRHDGIHTFH VGKGANVRYEEKHYGEGEGTGARVLNPVTKIILDKGAVFTLDTAQIKGVDSTVRTTDVIM GEDAKLYVVEKLMTHDSQTAQSDMEVNMNGEGSSAQIVSRSVAKGSSVQTFHPKAVGNAR CHAHIQCDSIIMDKAEVCSIPEINARHLDAAIIHEAAIGRINDEQLIKLRTLGMTEEEAE GVIIENFLE >gi|224461045|gb|GG657759.1| GENE 1575 1628125 - 1628844 190 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 21 223 38 249 329 77 28 2e-12 MLEVKNLTFKVDENGVQRSIVKDISFQVEDGEMLVITGPNGGGKSSLAKVLMGIEDADEG RIVLDGEDITDYDINHRAEAGIGFAFQQPPRFKGMTVDKLLSLAAGRSLTEPECCRMLSS VGLCAREYITREVDATLSGGEMKRLEIATVLARPHKLCIFDEPEAGIDLWSFSMLVQQFE RIHEKKEQSLILISHQERIIQMADRIMVIENGKIGAIGTRDEILPSLLSEGQCACMDGQ >gi|224461045|gb|GG657759.1| GENE 1576 1629040 - 1631199 1622 719 aa, chain - ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 81 451 5 364 372 326 50.0 1e-88 MKHEFAEIRIPIESDNPAVRREESLCIKCGQCRQVCEREVAVGRLYDLKSTNDTAICVHC GQCANVCPVDSIKEVYEYRKVKEAVEDPEKIVIFSTSPSVRVGLGEEFGYPAGSFVEGKM VAALRSLGADYVLDTNFAADLTIMEEASELVERVTKKTKPLPQFTSCCPAWVKFAETFYP EILPHISSAKSPIGMQGPTIKTYFAKQNNLDAAKIVNVAVTPCTAKKFEIRRGERNISAV SNGAEDMRDMDHVITTRELARWMREEGIDLKDLPDSSYDSLMGAASGAGVIFGNTGGVME AAARTAYYLITGENPPEDYLKLEPVRGMAGIRKAEVAIAGVPLKLAVIHGLENARQFIDC MTGGEQTYDFVEIMTCPGGCIGGGGQPKTEVPMTDAVRQARITALYDKDASMTLRYSHEN PDIKKVYEEYYIKPLSAVAEKLLHTQYHDRSADLGTAGMKEKPLTPSPWETAGEAGQRQE QDNLSDDTTNKKEKEKENKTMAKFKCTVCGYIHEGDNPPEVCPICKVGADKFVRLEEEKT GGGKYAGTKTEKNLMEAFAGESQARNKYSFFAEIARQEGMEQTAAIFTETAEQERQHAKM WFSEFHGLGDTAENLQTAADGENEEWSDMYKRMAKEAREEGFEALAVKFDNVAKVEASHE KRYLKILETLKAEKTFKGDAPLGWKCRQCGFIYEGEEAPERCPACGYSRAYFERKVENY >gi|224461045|gb|GG657759.1| GENE 1577 1631448 - 1632299 556 283 aa, chain + ## HITS:1 COG:L42411 KEGG:ns NR:ns ## COG: L42411 COG1408 # Protein_GI_number: 15673582 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Lactococcus lactis # 1 279 1 276 278 320 53.0 2e-87 MKLLRNVFLVLLLLILSAAGCVFYAFKIEPYRLKTNEYTINKTQSDSTPVKIIQISDLHI KEDFTCKRLEKVVNKVNSQNPDIILFTGDLYDNYAAYSDDENITAALQELKAAHGKIAVW GNRDYGGGASRQYESVMREAGFTLLKNENLSVTLNDQKKILFTGLDDSLLGRPLMPYTAG SDDSDYSILLTHEPDIIDEYMDNNYDLVLSGHSHGGQINIPFLPAVNEKAVETTALSTKY SGGMYHLKEDPDTTLYVNTGIGTTHISARFGVVPEVAVFYVCL >gi|224461045|gb|GG657759.1| GENE 1578 1632403 - 1633050 669 215 aa, chain - ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 5 207 3 205 210 125 32.0 5e-29 MKAVLGKEDYLDYFSRVLKKLEQEKDYVTELDAATGDGDHWANMYTGFKKLTDSAEDLRK ENLSGLMKRCGMLLMSGIGGSSGVLYGGAYISVSKALEGTEEIDLETFYNILKAMLESIM SRGGARPGHKTMIDALDPAVNVLRRLLDENQPECEVLEAVKEASRKGADATRSMRAVFGR AVYQADKGEGHLDPGAVTMYYQIEILADMFLEKLK >gi|224461045|gb|GG657759.1| GENE 1579 1633052 - 1634041 771 329 aa, chain - ## HITS:1 COG:FN1840 KEGG:ns NR:ns ## COG: FN1840 COG2376 # Protein_GI_number: 19705145 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 325 5 332 332 327 50.0 1e-89 MKKIINDPQKVVEEMLEGIQAANPDVCYIENMGVIARRTKTGRVGVVSGGGSGHEPMHAG YVGEGMLDAAVSGNVFASPDPERILAGIKAADSGKGVLLIITNYSGDCMNFSMAAELANM EGISTASVIVRDDVSVKDSTTSTGRRGIAGTILVHKVAGAAAAAGHSLEEVRRLAQKAAD NVRTMGMAMSSCTIPAIGRPGFELADDEVELGMGIHGEPGVKRVKLMSAKETARVLLSRI LNDLKETGSEFALMVNGLGGTPLMELYILNREAHIFLKSMGVKIHETFVGNYITSLEMAG CSLTLMRLDEEMKPLLEAPCDTMAWKRRA >gi|224461045|gb|GG657759.1| GENE 1580 1634088 - 1634960 911 290 aa, chain - ## HITS:1 COG:PM1373 KEGG:ns NR:ns ## COG: PM1373 COG0191 # Protein_GI_number: 15603238 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Pasteurella multocida # 2 264 3 258 294 155 33.0 1e-37 MIVTLQDMLKDAENKNYAVACINATTYEGLRGIIEAAEELNAPVILGHAQVHETVAPIDE FGPLIVQEAVKAKVPVVVHLDHGMDYEYAIKAVRAGFNSIMYDCSVLSLEKNIEEVRRFT KLAHKMGVAVEGEVGCMPSNIVGQGGCTEFGKEIINIKDYYTKPEEARRFVEETGVDMLT VSFGTVHGVFVDKPELDIQLLTDIHKETDAYLVMHGSSGVDQDQMLAAVDHGVRKINHYT SVGTAPASPLMEAVQRAEDPVYYHDLAKMSKDIIKEKSKEIIALLRSHMR >gi|224461045|gb|GG657759.1| GENE 1581 1634989 - 1636482 1240 497 aa, chain - ## HITS:1 COG:AF1752 KEGG:ns NR:ns ## COG: AF1752 COG1070 # Protein_GI_number: 11499341 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Archaeoglobus fulgidus # 5 488 12 490 493 203 28.0 6e-52 MAIGGLDIGTSSTKFAVFRNDGSVICESKRKYKEYGTGGIREIHPQEVWSAVVEVLEEAA VLCPEQIDGFAIAALGESFVAVDAHDRVLNASMVTGDNRGIGEGKRIVRQYGRKELIELT GVCPSEMYALPKMIWTKEHTDIFEQTRFLFMYEDYVAYMLTGERKISYSGASRSMAFDIR KQEWCEELLGLAGLNKEMMSEPVPSGEIIGNIRAEICALTGLSEKTVIVAGGHDQMCAAL GNGVLESAICGDGMGTCEVMAVPLDGIHTDECMIKNELPCVPYLHKDSYLTYLVMTNCGS LMNWYRDFVMNEKYALSDRMADDRFSLLDEGVPDDPTGLLVIPNFGSSGNPHVDYAARGT IWGLTIHTSPGELFGGFKEGMAYHMKLCFEALGQMGIHPELIRVSGGGAASDVTLRIRAD VFGLPVCRMEHTEAGAKGCMLLAASALGIYKNEKEAFHKTSRIEKTFYPDKGRHEQYMTL YEKYRQLYETLYQFHLK >gi|224461045|gb|GG657759.1| GENE 1582 1636504 - 1637517 979 337 aa, chain - ## HITS:1 COG:SMc01214 KEGG:ns NR:ns ## COG: SMc01214 COG1063 # Protein_GI_number: 15965330 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 1 318 1 322 347 207 35.0 3e-53 MKAYVFLEPNNAQIAELEKPVPGDDEILVKVAACGFCGTDIHTYKGEHVTEYPVVPGHEF SGVVEAVGNKVINFTLGDHVVGDPNIFCENCDFCKANKQIHCKNIQVVGNTRDGAFAEYI TLPERCAFHIPKDTDMIAMSMAEPLACVINAHNKVTIGIGANVLILGAGTIGLLHLMIAR QRGAATVTIVDLKESQLRTALELGASYTVLADKNQNKKLRETAPNGFDVIIEATGVPKVC EAGIPLLADTGTIITFGAYPVHSRIEIDPQQVYYRDLKIIGSYALQKTMQQSIEMIGAQK VDLRPLVGEVITLDEMPEAFGRFMEGKTEKKTIVAFD >gi|224461045|gb|GG657759.1| GENE 1583 1637531 - 1638598 767 355 aa, chain - ## HITS:1 COG:YPO3352 KEGG:ns NR:ns ## COG: YPO3352 COG1063 # Protein_GI_number: 16123502 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 5 355 18 368 371 388 49.0 1e-107 MKENTMKALRMYAPYDFRYEDVPVPEISDDEILVKIDTAGICAGDVKTLHGGIRIWGTGE EDRYIQAPCIGGHEFFGEVAEKGAGVKDVEIGDRVISEQIVPCNDCEYCRAGNYWMCRQS DVYGFKDHTQGGFAQYMKFHKNGRNHKIPEQLTREQAVLIEPYACSMHAVERGKIRHSDV VVISGLGAIGLGMVTIAKTHAPRLLIGLDMRENRLLKAKEFGADIVLNPARTDVAEEIMK LTQGYGCDVYIEAAGSEQSVDQGLKAIRNLGRFVQFGVFKEKISADWNIIGDTKEIDILG SHLGPYCYDAVIQGMLDGSIKTDGIVTHTFAMSDWDKAFETAEKSPDAIKVAMRP >gi|224461045|gb|GG657759.1| GENE 1584 1638615 - 1639589 1130 324 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 18 312 35 328 330 199 42.0 5e-51 MSRIKDFYKKIAEQIVLFAIIIVIIIAMGIASPYFLSVRNAMNIVQYVSTYGIIAIGMTM VILTGGINLSVGGTLALSVYVAAKCMLAGIPWPAAILVCLIVGGMVGVVNGFAVAGLKIP PLIATLAVEQITRGIHLGLAQGAPLHGFPEHFLNIGAGELLGIPMAVIWTIGLFLFFGFF LAKTKTGRLIYAVGGNPEATRIAGINNKRLIMLVYIFAGLLCSIAGIIVVGRMNSVAVSI AQGIDMQAITACVLGGASVTIGGKGKVSGTFLGILIMGLIQNSLDLLNVSAYWQTFIQGL ILLLAVSLDAVRTLRASGTYKKKR >gi|224461045|gb|GG657759.1| GENE 1585 1639665 - 1641155 210 496 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 264 489 9 229 245 85 29 1e-14 MGDMILEMNNIKKKFFDNVVLSGVDFSLKKGEIHALVGANGAGKSTLIKILNGIYSLDGG DISIEGKTVQIRQPSDAEKYGISFVHQELNVCLDLNVAENIFVGSLQKDKFGLYDAKKTI RKAQELIDDMKINISAKDTVRSLRAAEKQIIEILKAMTTNAKIMVLDEPTSSLTEKEKAV FFQLIYKLKENGVSIIFISHFLEDILQMTDRVTVLKDGHNNGVFQTAQVDKNILIEAMMG RSIVKRKETDVKRKETHTTALELKNFTSENKFKNISLTVKAGEIMGVCGLLGAGKSELAR AVYGLDSYDSGELYLYGEEIRNPSPEKMMAKGTALITEDRKQEGFSQLLSIRETITLSNL GSFCNKAGVIKETGRKKFAEDMAKRMTVKCDSIEQRISELSGGNQQKVIIGRCVASMPRL FILDEPTRGVDVYAKMEIYNILTDMADQGVAILIFSSELEELIEVCDTITILKSGEVTGK VEPREISKNELFAMIS >gi|224461045|gb|GG657759.1| GENE 1586 1641253 - 1642254 1035 333 aa, chain - ## HITS:1 COG:L82310 KEGG:ns NR:ns ## COG: L82310 COG1879 # Protein_GI_number: 15673617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Lactococcus lactis # 3 322 5 321 324 125 27.0 1e-28 MKKRFLAAFLCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWY GFEKQAKEYGWEATLLDPQGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVNEA GVPVFCVDRRGEGEVVSTLETDNVKAGEAMAEQLVKDYGEDVDVLIIQGVLSDTPTLDRT QGVKNVLEKYENITIVGEPSAGEYSNEAALATTKNFLETNPDLDVIFTCTDALVPGIVAA LKEAGKTGKVGEENHVGIYSVDGAGEVLKLIEDGTVDGTFSQYPIQFGIDTVKSMKTYLD GGKVEEKVYYNGDVVTDENIDKLHDDLWGFIIG >gi|224461045|gb|GG657759.1| GENE 1587 1642568 - 1643344 490 258 aa, chain + ## HITS:1 COG:CAC0231 KEGG:ns NR:ns ## COG: CAC0231 COG1349 # Protein_GI_number: 15893523 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 1 254 1 254 254 130 35.0 3e-30 MLRESRQKEILNLLNTNGYVEISALCRMFNVTEMTIRRDLDQLAQYNDIERTRGGAVRSE TTLYEETRFEHRINLHSEEKLQIASEALKYISYGNTVYFDSGSTSFCLAQSLPSDIHILA VTNALNICSELTYRSNISTIMIGGEISRNTLSSRGTLSEEMLKLFRLDVAFLGANSIELD GKIYTANVNETGLKKTAMRSAKKTYVLADSSKINSSKIITYASLNEMDGLITDSGISESD RKQLMEHGANVIIADMQL >gi|224461045|gb|GG657759.1| GENE 1588 1643603 - 1646983 2085 1126 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569504|ref|ZP_03778529.1| ## NR: gi|225569504|ref|ZP_03778529.1| hypothetical protein CLOHYLEM_05590 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05590 [Clostridium hylemonae DSM 15053] # 1 1126 16 1141 1141 2104 100.0 0 MIKKRRVKKILLLCICLVWSCVQTGPYQVLAAGSASVSYDISADAVNLTNTNETVSITGT SIEQNTIVISGGQPTLQLNNVIIQAPNKDATPGANNSETSKPAVHIKDGAQVTIEVSGIN ELAGGAYRAGIQVEEGASVTIAGSGSLNVSTAGIQGSSAAGIGGGSVYNSENGGNYGEPA GRIVIGGSVKLTATCGWGSAAIGAANYVGSGQVESASLGFESITLKDQAEVTTVEPGYSA AIGSGYQNSTDIYQYYKNGVGELTIQDEAKLTLNGTGTNGNATCFATESIVAQINYQGGT ITSGTYSSTKVSPVKKTLQFIGDQGAFLRDTHITYKVSQRYEDSNIKTLYNTVTGEGTVG GDGKLQDITVFNGSNYIEAVTDSGTVYRAVFGQGDAVIAFHPCTCPQLLKLSMEDQINVP FTHNGSYVFNTYDKPIQFNIDAGCALEDYLHVEGEVEITSPDMTITRVGDGGLYYYEIPE ASMNKTAQIAVSANVNGREFKLNHSIAVVKKAAPQVESMTVDIKGEVESEEVFTITLTGT QMEVFQKGTLIAVMADPQSNVMSQAIFKRVNDNQWRASLKALMNRTDQTQTYRVSIFALS EDRDGYNYDFRANAFIDSGSADQDNCMTPVSVKPDLETPAFSLKNGALKISKNADGTIQV EQPGRGTVTLLQKKLAISEGTTLDSWKILYGDEDYKTQPLVEIEEGAEVEIVLDGDVLQR LPGYTANAIEGQDNVVLKLDTAATSTITGDIHLGDNSILKAGVVTVEGDVTADQVNVETS GILIVRNTLTARKMITDQAVVYADSLKAGDFAVFNESFVYFQDISGSVLPTLNHSIFGVA KGFTGVLKDSDNQTLKKTDISLPLLMSHGDYPFPALKEVIFSADQGENWHTADLSEKNVS YDIFNNLFMTDTPVLYVQDDVFDVLVKIADRIYQYDIDGKAFTGEVILHLDKNELSSQGT MPQAELGLQNKGTVDLSYVNCQLSGQDADKMQILEKAKRSKMMNIAAGDQKNTVVGLKEG MKAGTYKAEMAVSIGDLNLYKIPVTLTKQDKKPGTTDPSGGTDGQPDTNVDHQTDKQSGL GSAGNPTGGNVKSGDTAPVGLYIGTLAAAIAVIGGGFWHIKKKGKR >gi|224461045|gb|GG657759.1| GENE 1589 1647041 - 1647616 178 191 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 5 182 7 202 311 73 27 5e-11 MDIKINNLNKSFSGQPVLEGLSFSFPEGKSSCIMGPSGCGKTTLLHILMGIEEPDSGEVT GVPSGRLSAVFQEDRLCENLSVMANLKMVCSRRPEEELKEALAELGLSAAMGKPVRELSG GMCRRAAVLRALLSPSLCVMMDEPFKGLDRDNRHRTAAYIRKMIKGRTLITITHESEDIE LLGADTILRFS >gi|224461045|gb|GG657759.1| GENE 1590 1647620 - 1648405 616 261 aa, chain - ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 25 257 27 257 269 82 27.0 5e-16 MMISTTRNKQGSRISRYAARVLAVCFWLGVWQTASMKLGQEILLASPASVLQKLAGLSVT LGFWQAVGYSFVRIISGFFLALVLGMILAVLACRFSVIEILLTPLIVTVKSIPVASFIIL CLIWLPSRNLSVFISFLIVLPVIYTNLLEGIRQTDEKLLEMADVFSIGWGRRILYIYLSQ LLPYLLTACTLALGLCWKAGVAAEVIGVPDGSIGEKLYHAKIYLNTPELFAWTVVIVMIS FVFEKCFLGGIRWLVQKVERM >gi|224461045|gb|GG657759.1| GENE 1591 1648380 - 1649384 1117 334 aa, chain - ## HITS:1 COG:TM0202 KEGG:ns NR:ns ## COG: TM0202 COG0715 # Protein_GI_number: 15642975 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Thermotoga maritima # 55 333 26 300 300 80 23.0 3e-15 MKLKKAAAWLLVVCMCGAVLIGCASNRAETEKKDTKEETKKTEENVKMNVGALKGPTAMG MAQMLDDENYTFTISASPDEIVPMVVQGKVDIAAVPANLSSVLYQKTDKAVSVLAVNTLG VLYLVENGNTIQSAEDLRGKTIYASGKGATPEYALNSVLEANGLDPSIDVTIEYKSEHAE VAAALAADETAAGLLPQPFVTTALMKNENLKIALDLNQMWEDKMSDGSRLVTGVVIVRNE FLNEHKDAVDKFMEQYEKSVDFVNDSPDEAAEIIGSHDIVAKEVAVRAIPDCSIVFVKGE EMKTMLSGYLETLNRQNPETIGGAVPDDDFYYEK >gi|224461045|gb|GG657759.1| GENE 1592 1649727 - 1649834 75 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGPFSSERAGIRTPDNLIKSQVLYHLSYTPIRNLG >gi|224461045|gb|GG657759.1| GENE 1593 1650464 - 1650775 319 103 aa, chain - ## HITS:1 COG:CAC2664 KEGG:ns NR:ns ## COG: CAC2664 COG0622 # Protein_GI_number: 15895922 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Clostridium acetobutylicum # 7 86 62 141 155 70 42.0 5e-13 MIFFSDLPREEEFFIGGSHVFITHGHYYYVGMSEERLKAEARGRGADIVMYGHTHRPALT VEDDLVTLNPGSVAYPRQEGRKGSYIVMRMDDKGNADFEIKFV >gi|224461045|gb|GG657759.1| GENE 1594 1650956 - 1651576 364 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli E24377A] # 1 202 1 196 197 144 40 1e-32 MKRVIFATGNEHKMVEIRMILEGLGMEILSQKEAGIIADIVEDGSTFEENAMIKAGKIAE IAHGIEEYKDAVVLADDSGLEIDYLNKEPGIYSARYMGENTSYDIKNQTLLNRLDGVADD RRTARFVCAIAAVFPDGSGEVVRGTMEGIIGHEIIGENGFGYDPIFFLPQYGMTSAQLSP EKKNELSHRGEGLRKMRSVIESKMQG >gi|224461045|gb|GG657759.1| GENE 1595 1651573 - 1652748 977 391 aa, chain - ## HITS:1 COG:BH1771 KEGG:ns NR:ns ## COG: BH1771 COG0116 # Protein_GI_number: 15614334 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Bacillus halodurans # 1 385 1 385 385 396 51.0 1e-110 MDKVELIAPCHFGLEAVLKREIQDLGYEIAGVEDGRVTFYGDAEAVCRANIFLRTAERIL WKAGSFKAVTFDELFEKTRALPWEEFIPEDGKFWVAKAASVKSKLFSPSDIQSIMKKAMV KRLQEHYHTEWFKEDGASYPVRVFLMKDIVTIGIDTSGVSLHKRGYREVSGTAPITETLA ASLIMLTPWNRERILVDPFCGSGTFPIEAAMMAANIAPGMNRSFTAESWTNLIAKKKWYD AVNEANDLIRDDIEVDIQGYDVDDSVVRIARQNAAEAGVEHLIHFQQRDVKELRHPKKYG FIITNPPYGERLEEKENLPQLYRTFGESFRTLDSWSAYMITSYEDAERYFGRKADKNRKI YNGMLKTYFYQFPGPRPPKRFGSQEERKANR >gi|224461045|gb|GG657759.1| GENE 1596 1652931 - 1653131 270 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKNYNSSNSNSNASNQNASNQNASNRNASNQNASNKNASNQNSSNKNASNQNSSNKNSS NESNNY >gi|224461045|gb|GG657759.1| GENE 1597 1653374 - 1653700 217 108 aa, chain + ## HITS:1 COG:no KEGG:Thit_1098 NR:ns ## KEGG: Thit_1098 # Name: not_defined # Def: sporulation transcriptional activator Spo0A # Organism: T.italicus # Pathway: Two-component system [PATH:tit02020] # 7 104 153 253 260 68 36.0 1e-10 MDKSRALLLRLGIRSTLKGFYFLLYALKLCLSNDEYLLSVYKTLYVDVATHFGTSRDNVE HCIRTAISNCWYKGNRKLLINITGYELKQKPANGEFIDILYNYLTQEG >gi|224461045|gb|GG657759.1| GENE 1598 1654017 - 1654556 441 179 aa, chain - ## HITS:1 COG:MA0725 KEGG:ns NR:ns ## COG: MA0725 COG4739 # Protein_GI_number: 20089610 # Func_class: S Function unknown # Function: Uncharacterized protein containing a ferredoxin domain # Organism: Methanosarcina acetivorans str.C2A # 10 179 6 179 184 125 43.0 3e-29 MLLQSGTLEERGVLDTAAKMCVAARTAPKAKGVDEILTLVLTGDEKNLLADKMEELGVRY FKDKAFVWYGRDAENVRKSQAVVLIGARKSYRGVGQCALCGFKNCEECKKAGGNCAHLFL DLGIALSSAVLKASGDNVDNRMMWSAGKAAAEMQYVEGEAFWIGIPLNVSGKNIYFDRQ >gi|224461045|gb|GG657759.1| GENE 1599 1654619 - 1655026 295 135 aa, chain - ## HITS:1 COG:BMEII0785 KEGG:ns NR:ns ## COG: BMEII0785 COG1846 # Protein_GI_number: 17989130 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 5 124 16 136 149 101 40.0 4e-22 MKHNKGTCYCIGIRRAANAVTSFYDRALEPTGITVNQFSLLMNLSRLGSGSISELAAYVG LERTTLTRTLKPLTERGFIKDVSEKGRRDKKLQLTSLGKETLNKGIPLWESAQSEIEARL GKENLRWFFEISEKL >gi|224461045|gb|GG657759.1| GENE 1600 1655167 - 1655487 258 106 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569516|ref|ZP_03778541.1| ## NR: gi|225569516|ref|ZP_03778541.1| hypothetical protein CLOHYLEM_05609 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05609 [Clostridium hylemonae DSM 15053] # 1 106 1 106 106 156 100.0 6e-37 MSLGDPWVIARSLIDAAENTAEARGGYEAKEASGRQSGGREYGAGGGSVHVFGFDSWWKK LLLVLGIIGVVLIVVAVIGGIFSLLMPLIMPIIVVMLVVRLIGRRR >gi|224461045|gb|GG657759.1| GENE 1601 1655405 - 1655632 180 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167759974|ref|ZP_02432101.1| ## NR: gi|167759974|ref|ZP_02432101.1| hypothetical protein CLOSCI_02346 [Clostridium scindens ATCC 35704] hypothetical protein CLOSCI_02346 [Clostridium scindens ATCC 35704] # 1 50 3 52 154 71 62.0 2e-11 MTQNEFLDKLRNALENELSGSAVQDNVAYYSSYIMEEMRKGRTESEVVGESWRSVGHCPF SHRCGRKYRGSTRRV >gi|224461045|gb|GG657759.1| GENE 1602 1655750 - 1657861 2205 703 aa, chain - ## HITS:1 COG:CAC2658 KEGG:ns NR:ns ## COG: CAC2658 COG3968 # Protein_GI_number: 15895916 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Clostridium acetobutylicum # 7 703 4 696 696 865 60.0 0 MSEAINVAEIFGEDVFNDTVMLERLPKKVYKDLKKTIEEGKELDLATADVIAHEMKEWAI EKGATHYTHWFQPLTGVTAEKHDSFISAPLDNGKVLMSFSGKELIKGEPDASSFPSGGLR ATFEARGYTAWDCTSPAFVRHDAAGATLCIPTAFCSYTGEALDQKTPLLRSMEVISEQAL RLVRLFGNTTAKKVTPSVGAEQEYFLVDAEKFRLRKDLIYTGRTLFGAMPPKGQELDDHY FGTIRQRIAGFMKDTNEELWRVGVTAKTQHNEVAPAQHELAPIYAPANIAVDHNHLVMQT LKRVAGRHGMKCLLHEKPFAGVNGSGKHDNWSITTDDGRNLLEPGKTPHENIQFLLVLTC ILKAVDEHADLLRESAADPGNDHRLGANEAPPAIISVFLGEQLEDVLQQLISTGEATHSL KGGKLETGVRTLPDLAKDATDRNRTSPFAFTGNKFEFRMVGSRDSVAGPNVVINTIVAEA FSEACDILEKADDFEMAVHDLIKQYAIEHHRIVFNGNGYAQAWVEEAARRGLPNISSMVE AIPALTTEKSVSMFERFNVFTRAELESRAEIKYENYSKAINIEARTMIDMASKQIIPAVI RYTKSLADTVVAVKEAGADMSVQAGLLTEVSGLLAETKKALEALILAADKASDMEEGKQQ AEYCHSDVVPAMEALRKPVDELEMIVDKEAWPMPSYGDLIFEV >gi|224461045|gb|GG657759.1| GENE 1603 1658081 - 1658944 1258 287 aa, chain - ## HITS:1 COG:CAC0827 KEGG:ns NR:ns ## COG: CAC0827 COG0191 # Protein_GI_number: 15894114 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Clostridium acetobutylicum # 1 287 1 287 287 402 72.0 1e-112 MLVSAKEMLEKAVAGHYAVGQFNINNLEWTKAVLLTAEECKSPVILGVSEGAGKYMTGFK TVQAMVKEMIDGLGITIPVATHLDHGSYEGCLKCIDAGFTSIMFDGSKYPIEENVAKTKE LIAICKEKGMSIEAEVGAIGGEEDGVIGQGECADPQECKMIADLGVDMLAAGIGNIHGKY PENWAGLSFETLDAIQQLTGKMPLVLHGGTGIPDDMVKKAIDLGVAKINVNTDCQLSFAD ATRKYIEAGKDLEGKGYDPRKLLKPGTDAIMQTVKEKMELFGSVGKA >gi|224461045|gb|GG657759.1| GENE 1604 1659075 - 1660130 1002 351 aa, chain - ## HITS:1 COG:mlr8213 KEGG:ns NR:ns ## COG: mlr8213 COG1609 # Protein_GI_number: 13476785 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 10 341 3 329 343 248 40.0 9e-66 MQKSNGSKVTIGDVARIANVSKSTVSHVLNDTKHVSDRTKDKILKVIEETGYTPNLVAKA LKKSETRTIGLVISDIQNQYFIDVIKAISDACILNNYTVFLADSNDDPKRELEIVQSFCE RCVDGFILSPTAESEKYVGKYFEEKDIPVVYIDRMLGGNGDWVGSENEKSMEKLTDHLIS LGHRRIAFVAGLRNISTTEERIRGYQNSLAKYGIPYDGSLVIEGESRTVPTEIRTKDIVR KMARQADRPTAIIAANNLMVLGVMKALDSLGIKVPEDMAVAAFDDCEWAALFHPGLTTVA QPCREIGQKAAELLIDRIQHGAGAPQKIYFQTKLIIRESCGAKLDNSSRTD >gi|224461045|gb|GG657759.1| GENE 1605 1660255 - 1660686 380 143 aa, chain - ## HITS:1 COG:no KEGG:Mahau_1308 NR:ns ## KEGG: Mahau_1308 # Name: not_defined # Def: Glyoxalase/bleomycin resistance protein/dioxygenase # Organism: M.australiensis # Pathway: not_defined # 13 141 2 130 132 65 35.0 6e-10 MREEEKLSNNIEVKGLAHIGIPTSDLEKSIAFYQDLGFQIIVDQEGMEGNNFIFMECGGV IIGLPQSLDETVRSQAGTKGDGNIDHFALLVDDLDKTKKVLEEKGVPFAIPGVSTTEAWR PKSCRCIMVYGPDRVKIEFVELK >gi|224461045|gb|GG657759.1| GENE 1606 1660665 - 1661480 681 271 aa, chain - ## HITS:1 COG:no KEGG:Calow_0353 NR:ns ## KEGG: Calow_0353 # Name: not_defined # Def: amidohydrolase 2 # Organism: C.owensensis # Pathway: not_defined # 71 260 94 264 271 81 33.0 3e-14 MVIDTHAHVFFLDKFIDYDDKPLFQYMEEQKVDRCSCIATTKAENAAMLESVGKYGDKLF GIGYVNVHDMENSLKELRDNVGKGVVRGIKMHPYVEDYVVDDPMLDPLYETCLELDIPLL FHNGIVTFSTWPSDEPGKIKTPKYECIGFPHQFAAVLERYPKLKIIFAHFGGNFYREFLC LTERFENAYFDTAWLRHYAARQFPPVDIHRWIEHAVSILGSKKILFAGEGTLPSDIKECK ISEEQKEDILWKNASDLYKLGDEYGCGRKRS >gi|224461045|gb|GG657759.1| GENE 1607 1661481 - 1662218 461 245 aa, chain - ## HITS:1 COG:CAC0187 KEGG:ns NR:ns ## COG: CAC0187 COG0363 # Protein_GI_number: 15893480 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Clostridium acetobutylicum # 1 241 1 241 241 246 50.0 4e-65 MKVIVVDDYGQMSQWAAQIIAEQVREKPESVLGLATGSTPAGMYEQLVRMYEEGKVDFSG VRTANLDEYAGLSGSHPQSFRYFMDTHFFGQVNIKKDNIHFPKSTEGDFGAIAEEYEAQL RRLGSADIQVLGIGGNGHIGFNEPSDHFTEAVNVAELTGETIRANARFFTSPEEVPREAV TMGIKNVMSAKKIILLANGSGKRDIIRKMVYGDITPALPASILRLHGDCTVIVDKEAGQD LKEVE >gi|224461045|gb|GG657759.1| GENE 1608 1662196 - 1663155 801 319 aa, chain - ## HITS:1 COG:CAC0424 KEGG:ns NR:ns ## COG: CAC0424 COG0524 # Protein_GI_number: 15893715 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Clostridium acetobutylicum # 6 304 3 313 316 135 30.0 1e-31 MMRKYDVLTMGEALVDFVPEENRVPGPYRALAGGAPNNVACGLGKLGARVALLARVGDDA LGRCVIDTAGECGVDTSYIQTDRRRVTTVTVVMPRSEDMTRYAIYRKESADGALTFEDIP TELFDNAKILHYGSLGMAEKTSSECMGRAIRRAREKGMTTSLDVNLRPGSWDSRDEMISR CRELVRVSDIIKLTKEEAEILRLNPRKLAAEEDKIVLVTDGAETASVYAGKLSVSRRPEA VEAVDVTGGGDSFMSAFLYYYGAFAEKMEAEEFYANAVDFAVRASTIAVQRYGAIDSLPT LEEICEKGGGMPNESDCCR >gi|224461045|gb|GG657759.1| GENE 1609 1663152 - 1663952 830 266 aa, chain - ## HITS:1 COG:YPO0184 KEGG:ns NR:ns ## COG: YPO0184 COG0600 # Protein_GI_number: 16120525 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Yersinia pestis # 3 261 25 279 284 93 26.0 4e-19 MDKKMTKKKNIFLAALGIMILFAVWIWASFSLGETRVPSPWKIVSRFAGTITESPEIQFQ GAGSSGFSTHVMATLGRYLLGTLAGTAVAFICLFLTVRFRSFQEIFDPLVDILRAIPPLA LAPFFLLWFGTSQGGIIGIVIFYVFTMIFVAGAEALKRLDPVQADFARTLGAGRTTVAYR VLLPSLLPSMAGPIKVACSWSWGLVIVGELLGAKSGVGRILNAFIAILSTDLVVVGIVWI LILAVVVEKAVAVILKWLLRWNAGKV >gi|224461045|gb|GG657759.1| GENE 1610 1663962 - 1665251 1507 429 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569525|ref|ZP_03778550.1| ## NR: gi|225569525|ref|ZP_03778550.1| hypothetical protein CLOHYLEM_05618 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05618 [Clostridium hylemonae DSM 15053] # 1 429 1 429 429 830 100.0 0 MKKMIRVTVCLIMTAALTLAGCSGGSNKGKSAEGKTEAGIPQVSLKFATEPYPDHTVPYV GIEKKFFEDVGITLEKVDAIDADKVPSVLIAGNYDFASGAPSLFIPSMGQGDFTTFAFSN LFLGYSVMAPEGTKTYSDFVKEGMSGEEAIKAALGQMKGKVFTYPSESAIKPFIDLCFQK AGMTLDDVENEVIDDSNGVALMLAGRADFKVGGVPAAATLSSKGFVPILSAKDIVETAEP SEDSKEVRSILHNGWTTTEKWAEENHDTVLRLASVCFRINQYVNDDPKEAAKIHVNYVNQ LAGTEFTEEEVQALYKTSIPLYTWDMQKPWFEDKEDALYWEYEIGSTIKMYEDEGMFKSG EYGPSDIVSADKIYAELKELKAEADSNFEKLENADGTALELKEKAEYQYSIFNYLDARNL SEQAVKEMK >gi|224461045|gb|GG657759.1| GENE 1611 1665276 - 1666073 975 265 aa, chain - ## HITS:1 COG:sll1081 KEGG:ns NR:ns ## COG: sll1081 COG0600 # Protein_GI_number: 16329886 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Synechocystis # 69 242 82 255 280 97 31.0 3e-20 MGTKHIKKILAAAGLIVFWQIAALIARSGGEYSAVLVPTWGKVLTESLPGFAAFRGGALP NYADALYVLVSNSLITVKRVVTGLFIGGAAGVVTGIIIGLQPVLRGMFYPVVKILRNIPL LALIALFLVWFGGEEIGIIVYIAFGLWIIYTTNIIEAIDNTDRIRINFARTLGAKNMDVY TNVIIPMIVPNIINATKVALGVAWAIALGGEFLAAQDGLGRLLIVSQQYMETGRMLIILI VFIVLTAIFGWIVKVTGNRITRWMP >gi|224461045|gb|GG657759.1| GENE 1612 1666073 - 1666882 248 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 10 231 2 227 318 100 29 4e-19 MNMGEVEKKTQSGELNIEHVSIEFNTVSGDKMKALDDISLDVAHGELVAVVGRSGCGKTT LLNIVAGLLEPTGGTCRLNGKEITGPGRERGVVFQADAVFGWKRVGDNVDFALKLGGVPK EERGQLITKYLKMVNLEKFTKFYPKELSGGMRKRLQIAMVLANQPKLLLMDEPFGPLDYA TKVELQVEVEKIRLKNPLTTFFVTHDVEEATFVADRIIMIEKGKIVEELKVDIPRPRPVE IRNTAEFHAISDYLLGKLLELSDVKSEVR >gi|224461045|gb|GG657759.1| GENE 1613 1666879 - 1667754 834 291 aa, chain - ## HITS:1 COG:MK0426 KEGG:ns NR:ns ## COG: MK0426 COG2159 # Protein_GI_number: 20093864 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Methanopyrus kandleri AV19 # 8 284 2 242 243 75 24.0 9e-14 MGKYRWPVIDTNFKIGVNMKSTCVAEEDLIPWMDENGIDIQIVFQADEGFAHQTPKWNPY IGNDYVAKIQDMFPERVIGLATVNPWNDAPKTWNYPPDETGRPFTLPVADESSRELERCI VDLGLKGLRMNPAAHNYEINNKTVVYPMLNKLRELQERTGRVLPVVVHGAGDSGNTTALQ VAEVAKDFPKLVFLMIHSGFIWCYGTTGEIAPSYDNLLLDLTGNLGPYSVSEAYRQCGAG KFTIGTDGPLGIPGIKDKILDVFVDNEEDRELILGGNIAKLLGIEKIEVAR >gi|224461045|gb|GG657759.1| GENE 1614 1667726 - 1668649 876 307 aa, chain - ## HITS:1 COG:MK0426 KEGG:ns NR:ns ## COG: MK0426 COG2159 # Protein_GI_number: 20093864 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Methanopyrus kandleri AV19 # 8 286 2 242 243 86 27.0 5e-17 MVKERWPVIDTHYHTGVCLINTFDAEKELIPWMDKNGVDIQVIFQVNEGFVHKTPDWNPY IGNDYISRIQHKFPDRVIGLCTINPWLQAPKTYNWPKSKYGKEMDLPIRDEALEELERSI LELGLWGIKLHPLEHDFEINNKSIIYPIMEKLTRLQEKCGRKLFVVVHCAGDSVNNTPTQ LAQVAADFPDILFLMAHAGYMRAFGTAGDVAEGIDNLKLDLTLNVTPTTLKPTYEKEGAG KFVIGTDGPFDLATTKRLIVRDLTGEDDEEAVELVMGGNMAEYLGIPKIKYEEQEDENRG KISLAGN >gi|224461045|gb|GG657759.1| GENE 1615 1668643 - 1669710 932 355 aa, chain - ## HITS:1 COG:mlr8213 KEGG:ns NR:ns ## COG: mlr8213 COG1609 # Protein_GI_number: 13476785 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 9 340 3 329 343 252 38.0 8e-67 MSKKESKITISQIAKMANVSTSTVSHVINGTKNVSDRTRLKVAGIINETGYTPNYVAKAL KKSETKTIGLIVSDITNQFFVDVIQAVNEEALRNGYMVILGDSDDNPKQELELVKSFQER CIDGLIFSPTIHSGNYAAPYLNSVNLPAVCIDRTLDDKWDWVGTENRNAAKILTRHLIGL GHRRIAFVSGLRGINTTEERIEGYESALKEAGLPFDKTLLIVGESRIVPAKVRSKERFKA ILNTENFPTAIIASNNLMVIGIMRTLQELNVKVPEDMALAAFDDFEWADLFQPRITTIVQ PCRDIGTKAVQLLIERIKNPTAALQKVEYYPRLEIRESCGILLKDKLKKEGVKKW >gi|224461045|gb|GG657759.1| GENE 1616 1670204 - 1671079 700 291 aa, chain - ## HITS:1 COG:no KEGG:HS_1632 NR:ns ## KEGG: HS_1632 # Name: not_defined # Def: large adhesin # Organism: H.somnus # Pathway: not_defined # 57 174 1637 1760 2914 119 58.0 1e-25 MEENTSFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGASGNWYIGEADTGVPATGP KGEKGEAGPMGPQGLTGVTGPQGATGPQGLTGPQGPTGATGPQGATGPKGDTGAAGPQGP TGATGPKGDPGAAGPQGPKGDKGDAGTAGEQGPQGEKGEKGDKGDRGPVGPAGPVNMANN LETTEEGYALDARQGKVLLDTVNSALNDHIIKRTVGNRINVSAGQQSYTYINFAIPEGYS VLSVSAYAAHAATLCGAAVMSEGRIIIPFSSTAANTPETFTADVVLIKTMN >gi|224461045|gb|GG657759.1| GENE 1617 1671529 - 1672902 1357 457 aa, chain - ## HITS:1 COG:MA0901 KEGG:ns NR:ns ## COG: MA0901 COG0733 # Protein_GI_number: 20089780 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Methanosarcina acetivorans str.C2A # 3 456 8 457 459 454 54.0 1e-127 MEKREKFSSRLGFILISAGCAIGLGNVWRFPYITGKYGGGAFVLMYLFFLVILGLPIVVM ELSVGRGSQKSSAMSFNALEPAGSKWHVFRYFSMAGNYLLMMFYTTIGGWMLAYFVKMLK GDFEGADTAQVEGVFTALTSDRNGMLFWMVLISVAALLICSMGLQKGVELITKVMMSSLL VIMIVLVIRAVTLPNAADGLKFYLLPDFGKMEEAGIKEAVFAAMGQAFFTLSVGVGSLAI FGSYIGKERSLAGEAVSITALDTFVAVVAGLVIFPACFAFDLNPGEGPGLVFVTLPNVFR EMPGGRVWGSLFFLFMTFAALSTIVAVFQNIIQFARDLWDWPLRRSVIVNGVLLILLSIP CVLGMTDWSSFTIGGKNIMDIEDFIVSNNLLPLGSMVYLLFCVTRYGWGWDNFLKEANAG AGMKFPSGRGVRFYLTFILPLIVFVIFIQGYISMIMK >gi|224461045|gb|GG657759.1| GENE 1618 1672918 - 1673907 1061 329 aa, chain - ## HITS:1 COG:BS_yerQ KEGG:ns NR:ns ## COG: BS_yerQ COG1597 # Protein_GI_number: 16077740 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus subtilis # 1 302 1 301 303 184 33.0 2e-46 MRRLLFIYNPHAGKGLLKPKLSDVIDIFVKAGYEVVAYPTQAYRDAYKKVVQYEFGSYDL VVCSGGDGTIDEVVTGMMQRGDRTPIGYIPTGTTNDFANSLHIPKGLLSAADNAVNGAVF PCDVGRFNDDVFVYIAAFGLFTDVSYQTKQEVKNVLGHLAYVLEGTKRLFNVPSYRIKVT HDGETIEDEFIFGMVTNSRSVGGFRNMIGKQVVFDDGVFEVTLIKMPKNPLELQEIVAAL LIEQVDTKHMYSFKTGNIVFESLEEIPWTLDGEFGGIHDRVEVQNLNRQLEIMVPEEHIR ELMQNPEEYLLEEKQLEKKQLEDKQLEEK >gi|224461045|gb|GG657759.1| GENE 1619 1674001 - 1674258 325 85 aa, chain - ## HITS:1 COG:BH3566 KEGG:ns NR:ns ## COG: BH3566 COG1925 # Protein_GI_number: 15616128 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Bacillus halodurans # 1 81 1 81 84 60 41.0 1e-09 MIKKPVTIQTDMSTEDRSVALLVQEASQYQSQVFFEVEEKKINAKSIMGMMTLRLCQGEE LTVVAEGKDEEEAAKGLELFLSDKK >gi|224461045|gb|GG657759.1| GENE 1620 1674270 - 1675151 893 293 aa, chain - ## HITS:1 COG:CAC0513 KEGG:ns NR:ns ## COG: CAC0513 COG1481 # Protein_GI_number: 15893804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 293 1 315 317 255 43.0 8e-68 MSFSGNIKEELSRHYAKARHCSLAELSAIVHMCGGFQEDAGGTCSLGVHTENIAVARKCF TLIEKTFNIRTDIAVRRNTGRDSSSYFIHARGKELLAVKNASAQAVCCKRSYIRGAFLAA GSMSDPSKSYHFEIVCGDEAKAVHLRDIINSFGMDAKIVPRKKTFVVYLKEGSQIVDILN VMEAHIALMELENVRILKEMRNSVNRKVNCETANINKTVSAAVRQMEDISYIKETVGFDK LPEGLRDVALTRLEYPEATLKELGNLLREPLGKSGVNHRLRKLSEIADKLREQ >gi|224461045|gb|GG657759.1| GENE 1621 1675187 - 1676068 929 293 aa, chain - ## HITS:1 COG:CAC0511 KEGG:ns NR:ns ## COG: CAC0511 COG1660 # Protein_GI_number: 15893802 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Clostridium acetobutylicum # 1 287 1 286 294 301 54.0 7e-82 MRFVIVTGMSGAGKSTALKMLEDVGYFCVDNLPVPLIPKMADLLRVPGTEINKAALGVDI RSGQSFRELEKVLDELDMTGLKYEILFLESSDNVLVKRYKETRRFHPLSGNDSRVDQGIQ REREQLKFLKKRADYLVDTSHMLTRELKAELNKIFVQNKEYKNLYISVLSFGFKYGIPND ADLVFDVRFLPNPYYIEELRSESGNDREVRDYVMNNDKAKKFLEKLLDLVEFLIPNYIVE GKTQLVIGIGCTGGKHRSVTLANELFEQLKDTEVYGIRIEHRDIGKDAVTKAR >gi|224461045|gb|GG657759.1| GENE 1622 1676070 - 1676981 973 303 aa, chain - ## HITS:1 COG:CAC0510 KEGG:ns NR:ns ## COG: CAC0510 COG0812 # Protein_GI_number: 15893801 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Clostridium acetobutylicum # 3 302 5 303 305 300 49.0 2e-81 MNQDFYNALKDVLTEDKVLADEPMKNHTTFRVGGAADYYTVPESKEEVRDIIRLCRQWDV PFYIIGNGSNLLVSDKGYRGVMIQIYRDMSEITVEGHTVRAQAGALLSSIAARALSAGLT GFEFAAGIPGTLGGACVMNAGAYGGEMKDVLRYVTVLTEDGAFLTLHRDELELGYRTSVI ARKGYIALEAEIELKEGSKDEIKARMDELKEKRVTKQPLEYPSAGSTFKRPEGYFAGKLI EDAGLRGFRVGGAQVSEKHCGFVINRGSATAADIMALITEVADRVERQTGVRMEPEVKRL GEF >gi|224461045|gb|GG657759.1| GENE 1623 1677139 - 1678416 1388 425 aa, chain + ## HITS:1 COG:FN1486 KEGG:ns NR:ns ## COG: FN1486 COG1253 # Protein_GI_number: 19704818 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Fusobacterium nucleatum # 19 422 17 426 426 249 38.0 5e-66 MDSSDVIQLIILVVLLGLSAFFSSAETSLTTANKIRIRSLAEDGSKRAKTLLKITDNSGK MLSAILIGNNIVNLSAASLTTSLAYSFGGSMVAIASGILTVLILLFGEITPKTMATIHAE KMALIYAPIISMFMKIMTPVIFLINGLSMGVLLLLRVDPNAKNDIMTETELRTIVDVSHE DGVIESDEREMIYNVFDLGDAKAKDVMVPRVHVTFADVESTYEELLEIFREDKFTRLPVF EETTDNVIGTINMKDLLLYDNTKEFHIRDILREAYFTYEYKNISELLVEMRQASFNIAIV LDEYGETAGLITLEDILEEIVGEIHDEYDENEEDFIQEIGEREFIVEGSTNLDDLNDRLD LNLESEDYDSVGGFIIERLDRLPEAGDTITTEDGIRMVVETLDKNRIETVHMYLPEREAD EDTDD >gi|224461045|gb|GG657759.1| GENE 1624 1678468 - 1679178 967 236 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569539|ref|ZP_03778564.1| ## NR: gi|225569539|ref|ZP_03778564.1| hypothetical protein CLOHYLEM_05633 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05633 [Clostridium hylemonae DSM 15053] # 1 236 1 236 236 329 100.0 9e-89 MADRLEFRSKLGSIQETAAGQGNRLTVEEIEKFFEEDGLSQEQTELVCDYLLAQKVTVAG YKKQPGKIIESGEESADLSSEEQEYFTEYIQEIENMRGGSVEEARMAYYLPLVADAALQM HRKELFIGDMIQEGNLSLMAALRRFEGAVDSEQEIMEEVRAGLQAFIESQTETRRQDKKM VSQVAELDETIRHMSEDMGRKVSVDEVAQQLSMETEQVEALLKLAGEDVEEEQEEI >gi|224461045|gb|GG657759.1| GENE 1625 1679361 - 1681364 1545 667 aa, chain + ## HITS:1 COG:no KEGG:Spico_0262 NR:ns ## KEGG: Spico_0262 # Name: not_defined # Def: tetratricopeptide TPR_4 # Organism: S.coccoides # Pathway: not_defined # 2 667 3 675 675 417 36.0 1e-115 MSITKGILKIEGARPEGANPLPLFRDRQKNKHPKSNGTMRPEELDYFGYESAFRVLPYKM QDRYTRTKTRLTLTSVVLENEHLRAEFLPEFGGRLYSLREKETDRELLYCNPVMQPANLA IRNAWFSGGIEWNIAQLGHTFSTCDDVFFAAVKAGGASGGKEEEFLRMYDYERTRGLVWQ IDFHLPEGARSLTAHVRIVNDQPHSVPMYWWTNIAVKEEEGSRVFSGTDEVLYIEPQSQA EGCEHCFGRGQLPDLPVLPGKDASYSLNFDFSSEYFFQNPVSDAAPWEAVSYKDGTVFCE RSTQPLRIRKMFCWGSHSGGRSWCDYLSLPGQGDYIEIQAGLAPTQLHGMEMDAQSSIEF TQIFGTAAVQPGEGNLDSYGQAQALIRQAVEQSLPAEEVARADMHCRTLASLPCETILHR GHGWGALENMRRRAENKPLLPASFTFPQDTLGKEQEPWICLLEGRALPELNDTHFPASWM TDANYIPYLERCIKSDPHNTAAQLHLGVNLYENGRYDEAAALWEKALLAKPLPILHRNLA CAAHQEGDLKKAIRQMEQITLDTYIAADAAFLQEYLRLLAEDGQWQKLNDIYQKLPARLK EEERIYLLECEAALHLENWSFLEEAFQKEYASIREGETKITDIWFAFAAANQIDPKQLPK NLDLRMF >gi|224461045|gb|GG657759.1| GENE 1626 1681447 - 1681689 291 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569541|ref|ZP_03778566.1| ## NR: gi|225569541|ref|ZP_03778566.1| hypothetical protein CLOHYLEM_05635 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05635 [Clostridium hylemonae DSM 15053] # 1 80 1 80 80 127 100.0 2e-28 MKRLWELTNKTFQNDSATGVFLAANIICWTAAALIAGMLFCVISGVSVLAYATGIMCAAI YVGIIFGLFGGIIFLMRNRV >gi|224461045|gb|GG657759.1| GENE 1627 1681797 - 1682558 903 253 aa, chain - ## HITS:1 COG:BS_cwlC KEGG:ns NR:ns ## COG: BS_cwlC COG0860 # Protein_GI_number: 16078804 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus subtilis # 5 252 4 252 255 122 34.0 6e-28 MPYSVMVDAGHGGRDPGAVFNGRQEKDDTLRLALAVGEILQDNGIDVSYTRTTDVYETPY EKAMKANNAGVDFFLSIHRNSFPTDNEVSGVESLVYDLSGLKYQVAQDINAQLEAVGFVN LGVKARPNLVVLKRTNMPAVLVEAGFINSDTDNMLFDNNFDAIAEAIATGLLDALNAEGV IQENYYRVQVGLFRNWRYAERLRNELLEQDYPAFIDDSGPFISVQVGGYDNLSDAVAMER RLKMDGYDTLIIS >gi|224461045|gb|GG657759.1| GENE 1628 1682650 - 1683585 1092 311 aa, chain - ## HITS:1 COG:CAC2951 KEGG:ns NR:ns ## COG: CAC2951 COG1105 # Protein_GI_number: 15896204 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Clostridium acetobutylicum # 1 309 1 308 308 229 40.0 4e-60 MILTVTLNASIDKRYVLEEFKVGEVNRLKECQYTPGGKGLNVSRVVRIAGGETTATGFVG GHAGRYIEEALENFGVSCAFCRVSEESRSCVNIWDEKNGIQTELLEPGVTVTAEEFDRFT EQYRHLAERADVVAVSGSVPRGLDGTAYQRLTAIAKEAGSKVILDTSGALLELGIEAKPS LIKPNIDEIRMLTGKDCGKMDDIIEAALKIRERGVENVAVSLGADGSLVVCGSGVYRATV PRLDTVNSVGCGDSMIAGFAMGLERGDSMEETLRRASAVSAAAALQEETGIFDPDDMEKI YGKVKIEKIRM >gi|224461045|gb|GG657759.1| GENE 1629 1683595 - 1684644 1278 349 aa, chain - ## HITS:1 COG:STM3261 KEGG:ns NR:ns ## COG: STM3261 COG1063 # Protein_GI_number: 16766559 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 345 1 344 347 261 40.0 1e-69 MKAAVVCANEDVRYLDHEEPNAGPGMVKVKVKASGICGSDIPRVLHNGVHFYPIVLGHEF SGDVVETGEGVTRVKVGDRVSGAPLLPCMKCDDCQNGNFSLCKKYSFIGSRQQGSNADYV VIPEQNAVVFDKSVSYEQGAMFEPSTVALHGVLQNDYKGGGYVAVLGGGTIGMFTMQWAK IFGARKVVVFDISKERLKLAEKLGADEVVNSSEENFMEKAMEITGQRGYDYVFETAGQVP TMQMAFELAANKADVCFIGTPHAELSFTPSMWENMNRKEFRLTGSWMSYSAPFPGKEWEL TAHYFATGQLKFDPGFIYKKMPMEQAQKAFQMFKTPGLVKGKVLLVNED >gi|224461045|gb|GG657759.1| GENE 1630 1684647 - 1686161 1520 504 aa, chain - ## HITS:1 COG:CAC2612 KEGG:ns NR:ns ## COG: CAC2612 COG1070 # Protein_GI_number: 15895870 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 3 499 2 500 500 332 36.0 1e-90 MEQYLLGIDIGTSACKVAVFDENGQVKAGASGAYNVYYPHPGWAEQNPEEWWQAVCSAVK AAMEKSGIRPGSVAGIGIDGQSWSAIPIDAEGKVLANTPIWMDTRAAGICEETGARVGEK RIFDVCGNPFKPSYSTPKVLWYKEQMPDVYRKTDKILQSNSYIAFKLTGEVTQELTQGYG HHCFCMRQGTWDMEMCRDLGMDPDMLPAICASHDVIGTVTAKAAKECGLMEGIPVVAGAL DAACGTLGAGAVHPGETQEQGGQAGGMSICMDTYKADERLILSFHAVPGQWILQGGTVGG GGVMRWLEHEFGDYERMKGKETGKSSLELFNELAGEVSAGSDGVVFLPYMSGERSPIWDP DAKGVYYGLDFSKTKGHFIRAAMEGVALSLRHNLDVAEQAGASVSELRSMGGSANSLLWT QIKADVTGKRIVVPSSDTATTLGAVILAGVGVGMYKSFDEAVKKTVAEKRYHEPDPDTQE VYTRNYKVYRKLYENLKAVMKGDM >gi|224461045|gb|GG657759.1| GENE 1631 1686185 - 1687036 1164 283 aa, chain - ## HITS:1 COG:gatY KEGG:ns NR:ns ## COG: gatY COG0191 # Protein_GI_number: 16130034 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli K12 # 1 282 3 286 286 251 45.0 8e-67 MPLVTSEQMLLDAQKGGYAVGAFNVENMEMVKAVIQAAEELNAPVMLQTTPSTVKYGSLE TYFGIVSAEAKKASVPVCLHLDHGSSFELAVQAMKAGYTSVMIDGSHEDLENNIALTKRV ADVAAACGIPVEAELGKVGGKEDDLEAEADTNTDPAEAKVFVERTGVSSLAIAIGTAHGF YAGTPVLDKERVSQIKEAVPVPLVLHGASGLSDEDVRECVKRGMCKVNFATELRVAYTDA CKKLLGEKPGTFDPKKLGTVGMEAVKELVKGRMKVCGCDGRAK >gi|224461045|gb|GG657759.1| GENE 1632 1687039 - 1687833 1008 264 aa, chain - ## HITS:1 COG:ydjF KEGG:ns NR:ns ## COG: ydjF COG1349 # Protein_GI_number: 16129724 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 252 1 252 252 160 37.0 3e-39 MLAIERRNDILERLQKEKRVVVSELSQSYQVSEETIRRDLEKLENDGLVIKSYGGAVLNE HSIFDLPFNIRKNQKIVEKQKMAELIVGMVRDGEAVMLDASSTDVYIARALKEKKKLTVI TNSVEIIVELFDMPEWNVISTGGVSREKSFALVGPHTDRMIQSYHVDKAVISCKGLSLEA GITDSDEQDANSKRMMLGSAKERILVADSSKFGEIAFTKVAEWTELTKIVTDRKPGGQWL QEFEKNRIECIYPGKEKEAKEKEK >gi|224461045|gb|GG657759.1| GENE 1633 1687868 - 1688545 616 225 aa, chain - ## HITS:1 COG:PAB0117 KEGG:ns NR:ns ## COG: PAB0117 COG0235 # Protein_GI_number: 14520392 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pyrococcus abyssi # 6 188 10 187 194 117 36.0 1e-26 MQSELDIKNEMCEIGKRVYNRGMVAANDGNFSVKLNDNEFLCTPTGVSKGFMTPEYICKV DAEGNVIEANEGFKPSSEIKMHMRVYKEREDVRSVVHAHPMYATTFAVSGMELTAPIMPE AVISLGTVPLAKYGTPSTEEIPDAVSEYLPYYDAVLLENHGALTYGDSLLGAYHKMESLE FYARLLYQAMQIGGPQVLPEEQVKRLYSMRKQYGLTGRHPADMER >gi|224461045|gb|GG657759.1| GENE 1634 1688804 - 1690339 1822 511 aa, chain - ## HITS:1 COG:TM0284 KEGG:ns NR:ns ## COG: TM0284 COG1070 # Protein_GI_number: 15643053 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 3 507 2 506 506 499 47.0 1e-141 MEYLLGTDIGTSGTKTILMDTKGRLISQALEEYDVLTPKPLWAEQWPDVWYEASKESIRR TVEKAVAECGVKKEEIKGIAISGLYGGSGIPLDEEMKPVRPCMIWMDRRAQKETEWALEH IGEEKLLEITHNGADPYYGYTKILWMKHNEPDNWARTKLFLPPNDYVIYKLTGEIAIDYS SAGNIGGIFDMNDRVWSEELLDAMDIPLSMMPQKIVESTDIVGGLKKDMAEELGLWEGLP VIAGGIDCGAANIGLGVFEAGVYAAAIGTSMCAALISDRPVKGKGLIIWPYLYDAKNLSY YFAGGNTAGAIIKWFRNTLCQWEVENQKNGGPSVYDVLNEQAEEIPAGSEGLVVLPYFMG ERSPVWDSDAKGTIVGLSLTHTKGHIYRAFLEAVAYCLRDAMEATGEDLGEYILIAGGVT KSKVWRQIFADVTGYPVVCPIYDVEANMGDVMLAGIGTGILTYEEVKKWQVLDKKIMPNE ENHKKYNEYFRLYKNIYRHLKEDMKELTKAL >gi|224461045|gb|GG657759.1| GENE 1635 1690373 - 1691401 927 342 aa, chain - ## HITS:1 COG:slr0942 KEGG:ns NR:ns ## COG: slr0942 COG0656 # Protein_GI_number: 16330994 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Synechocystis # 14 329 15 325 327 199 39.0 7e-51 MENVDPAAVPQRKLSNGMIIPGIGMGTFGNDRYAPREVADAVYGAIKAGYRLLDCAAAYG NERDIGQVLARVFAEGVVQRQELTVMTKLWNDMHGKGDVLVACAKSLRDLKLDYVDVYMV HWPFPNYHAPGAVLTGRNPDAVPFSVEEYMSVWRQMERLVDMGLVRSLGMSNMTVTKLEQ VLPLCRIRPVVLEVEINPTFQQPALFDYCMSHGILPVAYSPMGSPCRPERDTEEGDVVTF EMPELKEIAETHGCHPASVCVKWAVQRGHVPIPFSVYEKEYVENLRCTTEDFLTEEEMDT LKRADRNARLIKGKVFLWEEAESWRDIWDGEDERNNCKTTEA >gi|224461045|gb|GG657759.1| GENE 1636 1691563 - 1692432 873 289 aa, chain - ## HITS:1 COG:AGl260 KEGG:ns NR:ns ## COG: AGl260 COG1082 # Protein_GI_number: 15890243 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 286 1 287 289 358 59.0 6e-99 MKHGIYYAYWEQEWAADYKRYVEKVAKLGFDILEIGAGPLPEYAEQDVKELKKCAQDNGI TLTAGYGPTFNHNIGSSDAGVREEALEWYKRLFEVLAELDIHLIGGALYSYWPVDFANAD KTEDWKWSVEGMQRLAPAAAKYDINLGMEVLNRFESHILNTAEEGVKFVEEVGMDNVKVM LDTFHMNIEEQSIGGAIRRAGKLLGHFHTGECNRMVPGKGRIPWREIGDALRDIGYDGTA VMEPFVRMGGQVGADIKVWRDISRGADEAQLDDDARRALEFQRYMLEWK >gi|224461045|gb|GG657759.1| GENE 1637 1692491 - 1693891 1549 466 aa, chain - ## HITS:1 COG:BH1551 KEGG:ns NR:ns ## COG: BH1551 COG1070 # Protein_GI_number: 15614114 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Bacillus halodurans # 4 465 3 461 467 489 51.0 1e-138 MPLYYLAVDIGASSGRHILGSVENGKIVLEEVYRFENGMIKKDGHLCWDHEKLFEHIKNG IKKCGEIGKIPVSMGIDTWGVDYVLLDEHDRVLGNMTGYRDKRTDGMDKEVYKIIPEREL YERTGIEKMMFNTIFQLMAEKKFSPEYMEQAKALLFVPDFFHFLLTGEKVNEYTEATTAQ LVNAQKRDWDYELIEKLGFNSGMFQRMAMPGEKLGTLRPALVEEFGFDMDVVLPCSHDTG SAILAVPATDDDYAFISSGTWSLLGIERDMPDCSETSRINDFTNEGGYDSKICYLRNIMG LWMIQSVRHDLDDKYSFAEICSQAAEAADFPSRVDVTDNCFMAPDNMTEEIKDYCRRTGQ QVPETLGETAACVYASLAECYDRTIKGIEASTGRTYSRIHIVGGGGNADYLNELTARATG KEVHVGPTEGTAIGNIAAQMICRGEFSGKEEARGMIHRSFDIKVYH >gi|224461045|gb|GG657759.1| GENE 1638 1693908 - 1695443 1488 511 aa, chain - ## HITS:1 COG:CAC2612 KEGG:ns NR:ns ## COG: CAC2612 COG1070 # Protein_GI_number: 15895870 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 3 492 2 494 500 304 32.0 2e-82 MDKYLIAHDLGTSSNKASLFSTEGRLIKSYTVPYDVRFFQKNCAEQNPLDWWNAVCTATR KIVDGICPEDVLSLSFSSQMQACVIVDRQGNALRPAMIWADLRAEEQARQLIERVGAERM YELNGHRASASYSIEKLMWIRDNEPELYGRTYKMLLAKDYIICRLTGNFVTDHSEASGTD AFDLRNRRWSEEILSAAEIEMEKMPELNASTDVVGQLLPEAAQALGLKKETRVVCGGGDG PCSALGAGSIEKGQMFLSFGTSAWIAGTSEEVFLDKEKTLICFGHVIPGKYMPCGTMQAA GSSYSYIRKTLCREEERRAQDEGIPVYDILNRLVTDSPAGARGLVFLPYMLGERSPRWNP DTSGSFLGIKMEHEKCDYIRAVLEGVAMNLDLILKAHREYTHVEELVLTGGGAKGDVLAQ ILSDVLGVALRRLDYVETATSVAAAVIAGVGVGVFEDFSVIHQFVKPERSFYPDRNNRDV YARQKALFEEGYNCLRSYYELETGFGKQSTK >gi|224461045|gb|GG657759.1| GENE 1639 1695639 - 1696385 596 248 aa, chain + ## HITS:1 COG:SP0246 KEGG:ns NR:ns ## COG: SP0246 COG1349 # Protein_GI_number: 15900181 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Streptococcus pneumoniae TIGR4 # 3 247 2 246 248 228 46.0 9e-60 MRERHTALLEYITEHGKTEVNILAEHLNTSKVTVRKDLDYLAERGMLKRERGYAVPNDPG DINYRMALHYNNKQKIARRAASSVQDGETLIIESGSTCALFADELAKSKKNVTIITNSFY LANYLKGYTNIQLIVLGGTLQPHGQSLVGPLTKSAAGNFHVDKIFVGTDGYSRTSGFTGD DLIRSDTLSSMTGSAEHTYVLAGSEKFSQPGSVAFLDLKDVYEVITDGDIPPEEKSYLEG QGIIVTIA >gi|224461045|gb|GG657759.1| GENE 1640 1696439 - 1697116 861 225 aa, chain + ## HITS:1 COG:SPy2048 KEGG:ns NR:ns ## COG: SPy2048 COG0176 # Protein_GI_number: 15675818 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Streptococcus pyogenes M1 GAS # 1 222 1 222 222 225 52.0 4e-59 MKYLLDTANLKDITHYCDIFPIAGVTSNPSIVKKEGSIDFFRHMREIRSVIGPESPFHIQ VTALDTDGMLRDADAILEHVDPNVYVKVPVTLEGIRAIKRMKALKIRTTATAVYSRQQGF LAMEAGADCIAPYYNRMENMGIDADDVIASLAEMIERYGYPSQILAASFKNAGQVDRAFL AGAQTATMDPSILEGILTQPHILSAVDAFDADWKSVFGGKTIAML >gi|224461045|gb|GG657759.1| GENE 1641 1697113 - 1698147 957 344 aa, chain - ## HITS:1 COG:SPy1602 KEGG:ns NR:ns ## COG: SPy1602 COG1609 # Protein_GI_number: 15675484 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 6 249 5 244 346 71 26.0 2e-12 MGNENLYETVKNRICNEIFEGHYEDGDRIPPERELEELLGVSRVTVRKSLELLEEEGLVV REVGRGTTVTLRNAGNRSELDMVVLIAPAQNPFFSEFIARFQNYAETKGALLLYVEKPRT EELERCLYRLYKRGLRNVVVWLEDMTADPDKLRRLRSLGMNLVFFDSDKGLPYADCVALD NRLAVQTLYEELVRQGYKDIAYIGWDLQEAYSIRTRRQAYKEAAGPAARLLCLPWKDAEK SEAMLGRLMTPADAQPDAVICSDRESGELTVETFRKSHAAVKIAAVDELAKSDRAEVIMY RQDLYAAVERIFTCLQDQCTMEGRWTAKLYLIRGILEQGPSVLP >gi|224461045|gb|GG657759.1| GENE 1642 1698160 - 1700544 2450 794 aa, chain - ## HITS:1 COG:AF1449 KEGG:ns NR:ns ## COG: AF1449 COG1882 # Protein_GI_number: 11499044 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Archaeoglobus fulgidus # 49 787 37 772 776 195 26.0 3e-49 MRIEKILDAGELTELAKKRFQEERGVDHLEGWFLAKEIMRECDSKYKEEPDCIRTAKTLA AVAEKLPLWLSDHQVFAGTQDDAFARSYALINPAFSVDSFTGYCDPVAVFGDIDPAGDIT RERIEELKEYNTKTAFSRALCSAYDKAGDDTSEAIYFIEQVTGHLIPDMRPVLRIGVEGL KRRIDEQRGKETDVQKLAYYEAMDTALGAVLVIAERYAALAEEKAAAAAGKDRERFLLMA ETLKNVPLHGACNLYEAIQSFLLMWQVMCLEQTPNPYAFSVGNADRIFEPYRLAENTDRE MAAALLKHLLVFYNVADRSWAISQNLIIGGKSNTGEDMTNVTSYALLDAYYDMNLPQPIL SVKLHKNTPNELYESLGRFLFTPGCLTPSFFNDDSVFEILREKNKVDPEDLEDYSVAGCQ EPLIMGKDNGNTTNSWLNMAKVLELSLNGGVSTISGKKFGRSSEEFGYHTDLELLQNIRT VFYENLELYVDRMTACANAASGAVSLLQVPFLSTLMGGIESGIDVRDTKAQGTKYNGSGC LIHGLSVVADSFAAIDTLLAERPEDAGRMLEALRDNFEHDPEMRQYLMKAEKYGNNIAKV DDEAAEIAGRVSDLVASRKNYLGNPFRADWASPSTHLLYGYWVGATPDGRKAREQLGYGI DPLYGEAHSGLGFRMLSNMKLPFDKMNGGCASHLGVNPNYFKAETFEGKGLEFKDKIIAP LFYNPKKEGIAPFYLYVNVTTPEMLRKVLDNPKKYAPGGVYIMRIHGTFVNFLDLSPDIQ EDIIKRLDMESTSM >gi|224461045|gb|GG657759.1| GENE 1643 1700603 - 1701469 927 288 aa, chain - ## HITS:1 COG:SPy2055 KEGG:ns NR:ns ## COG: SPy2055 COG1180 # Protein_GI_number: 15675825 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 12 260 16 230 257 117 32.0 2e-26 MKIFQKGFNYSQDGSGNRLVYHLQGCNMKCPWCANPEGMRPEGVIMADSEWLLETVCPHG AVKGTQVDREVCRTCEKKECVTEHKTKGMYLSYEEETPEEVFREACAGELMFYDGGGVTF TGGEATLQYDELEKALRMLKEYGINTAVETNGTHPALAGLFPYIDELIIDCKHCSDTKHT AYTGIPCGGILHNIREAAARHPKVHVRVPLIGGVNDGEDDLEAFLEFFSGIRGDNVTFEV LAYHEFGRKKWEACGWKYEMTRNAFVKDEVLKGFRKAVAESGCRYKKT >gi|224461045|gb|GG657759.1| GENE 1644 1701469 - 1702977 1534 502 aa, chain - ## HITS:1 COG:CAC2612 KEGG:ns NR:ns ## COG: CAC2612 COG1070 # Protein_GI_number: 15895870 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 1 491 1 500 500 347 36.0 3e-95 MNYYLGVDIGTSSVKSLLMDAEGHVAGTSQVGYDIIKSRPEYAEQDMEQLWEAARKTIAD VVRRYPEEAAQIRGISYSGQMHGLVMTDENGSLIRNAIIWADQRSQAEIHKIYDIVGEDA YRSVALNSLSTGFLIASLMWVKEHEPENYEKIRYIMLPKDYIRFRMCGEYGTDMSDASSG AIFDTKQRRWAWELIDSLRIDRQIFPTCHESCEVVGTVSRACAEATGLKCGIRVACGGGD TLMQAVGNGIISPGVLSANIGTACQISGGFNEPLYDEAYRTNTFCHVKKDLWMLMGAHLS GGVAMKWLMNQILYMDTFDEMTALASKAPAGSEGLLFLPYLSGERTPYNDPDAKGIYFGM TLRHGREHMIRSTMEGIVFGLRTSIEIFKGLGIEYSKIIASGGGARGQLFLEMQADIFDC DIYTNVGNEQAGIGAAITAAVACGEYADYEEACARLVRMKDTVVTPNRENQKYYEEQFAV YRELYGHNKDLFHMKGSYGEGM >gi|224461045|gb|GG657759.1| GENE 1645 1703145 - 1703888 624 247 aa, chain + ## HITS:1 COG:CAC3509 KEGG:ns NR:ns ## COG: CAC3509 COG0789 # Protein_GI_number: 15896746 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 186 1 192 250 84 30.0 3e-16 MNTYRTSEIAALIGIHPNTVRLYEQSGLIPRPERQSNGYRIFTDIHVEQFKLARLAFQIE VLQNGLRKKIVQMVKVSAAGDYDTALTITQEYLAQVRAETANAEEAIDIVKNILKGTAEQ YTCSMKRKEVSEYLNITMDTLRNWEMNGLLTVKRRQNGYRVYTGGDIRRLKIIRSLRCAN YSLESILSMLNQLSENPRIDIKKALDTPRENSGIIAVCDKLITSLTAAECNALKMIEKLQ YMKHTFS >gi|224461045|gb|GG657759.1| GENE 1646 1703958 - 1704692 316 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 206 1 212 311 126 33 5e-27 MQEVIKVTELTKSYGSLAAVSSLSLSVPRGTVFGLIGPNGAGKSTTIECILGTKKADAGT VRILGADPRSDRKKLFEKTGVQFQDSNYQEQITVSELCELTASLYEKPADPFGLLARFGI ADKKKSLVKDLSGGQRQRLFIVLALIPDPDVVFLDELTTGLDAKARREVWNILSGLKKRG LTIFLTSHFMDEVEALCDRICILKEGKSVFYGTVSEAVEKSPYGKFEDAYLWYTNEEDMY NENI >gi|224461045|gb|GG657759.1| GENE 1647 1704679 - 1705422 823 247 aa, chain + ## HITS:1 COG:TM0387 KEGG:ns NR:ns ## COG: TM0387 COG0842 # Protein_GI_number: 15643153 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Thermotoga maritima # 50 211 135 296 336 59 24.0 4e-09 MKTFKTMLKTELKLSLRGMDMFIFAICVPLVVLIILGIIYGSRPAFPGAEYTFLEQSFGA LTTISVCAGGVMGLPLVISDYRSRNILKRYKVTPVRPSMLLFVQVAVYTLYALTSLFTLY LAAVLFFGYEFRGSVLTFAGGYLLVLVSMFSIGMMVGGIAPNTKTAGVIASLLYFPMLIF SGATLPYEVMPDALQKAARLLPLTQGIKLLKAASLGSNAGSAAISVIIMALIAVLCSAIA FRYFKWE >gi|224461045|gb|GG657759.1| GENE 1648 1705512 - 1706531 1220 339 aa, chain - ## HITS:1 COG:SMc01214 KEGG:ns NR:ns ## COG: SMc01214 COG1063 # Protein_GI_number: 15965330 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 1 336 1 337 347 250 38.0 3e-66 MKAAVYYGKQDLRVEEVPEKELKDNEVMIKVKYCGVCGTDIHIFNGDGGSFEVTPPLIPG HEFSGTVAKVGAGVTAVKIGDRVSGDPNDMCGECYFCKNAMQHFCTNNIGLGTTVDGGFA EYVVLREKQVYKFSDELSFVEAAMAEPISCCLHGIDLCGIKQGDTVLVMGGGPIGMIMMQ LAKNAGASKIIMSEPVEEKRKLAEKLGATKTIDPISEDVQAVLADYCANVDVVIECVGNI HTQEDAVKFAGKGATVMYFGLAAPDESFPLKPDDVFKKELKITSSFINPYTFERAIQVLE SKAIDLESLITNIVPLDDIADVFTKPEYRRTGKVMIQVS >gi|224461045|gb|GG657759.1| GENE 1649 1706557 - 1707657 1071 366 aa, chain - ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 6 363 12 378 385 148 27.0 2e-35 MNKSQQIYHYVRTHQSVSKQDIVLGLKFSLPTITQKLQYLEQMNLIDTSKKIQNTGGRNA TAYSYVKGARAAIGVYLTGHHINCVAVDLSGDVIDMTKERIKFNLEDEDYLKKIGEVVER IKNDAEISDENLLGVGIAVQGLVSEDGEVVTYGLTLNFTGKTREEIARYIPYNCRLFHDS SAAGYAEVWIDHEICNAFYISLSNSVGGAVLVDNNIYEGNTQKSGEIGHMTVVPEGGEQC YCGRYGCFDTVCRSTNLDQYTDGNLELFFALLQSKDREAERLWEKYLDDLALGIHNIRML FDSDIILGGYVGAYIESYMDELCRRVDKRTSFSDCAKDFLFPCKYKVESAAAGAAICFID EFFDTI >gi|224461045|gb|GG657759.1| GENE 1650 1707834 - 1708781 1051 315 aa, chain - ## HITS:1 COG:BH3731 KEGG:ns NR:ns ## COG: BH3731 COG1172 # Protein_GI_number: 15616293 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus halodurans # 14 306 18 309 314 207 46.0 3e-53 MKDKVVYQLKDKAIWVVFLVLVIAFTIANPRFINPSNIFSLLRQVSMYGIASIGMTFVIL LGDIDLATGSIMSFVNIVCAYLMVNMGVNMWLAILVTLVVSTLIGVLNGFMVSTIGIPAL IATFATQTAFAGFAYILSGGLPINGFTDGFRIIGQGYVSVVPVPVIIMIVCFAVGSFILN KTYFGRYFYAVGGNVDAARLSGIRVGRIKYLVFAISGFFAGLAGIVMLSRTNSGMPNAGL GYEFKVITCVVLGGVSVTGGYGKISGVVAGTFIIGALTNGMVLMNINSYIQDVVMGVVLA LAVGFDCIQKKRQQN >gi|224461045|gb|GG657759.1| GENE 1651 1708778 - 1710292 192 504 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 225 484 1 248 329 78 25 1e-12 MNEEYVLRLEHIRKEYPGVVALKDVTLELKKGEILALIGENGAGKSTLIKCCSGAVIPTS GKIVVNGKEFTSMTPQLASENGIAIIYQEFNNVKELSAAENLFLGRPIKRGIVVDKKEME LQAAKAFEQLHIKIDPKALMKNLTVGYQQMVEIAKAIQQNAKILIMDEPSAPLTSAEVES MFEVVERLRKEGISIVYISHRLEEIYRLSDRILVLRDGEYVKTLITKDSEVQELIKLMVG RELTETYPPRKDCIDKNEVVLELKDITGNGDNNINLKVHKGEILGLGGLVGAGRTELAEV IFGAAQKTKGQMFFKGKEINPKSPREAIDLGIALVPEDRKRHGAMLGISIKNNINMPIYE KNSRFSVINSKLELKTAKRFEESMAIKTPTLNQLVKNLSGGNQQKVILARWLAADSELII FDEPTRGIDVGAKYEIYKLMNDLVEKEGKAILMISSEMEELMGMSDRILVLSEGEMTGEL EKDEFDQERIMAYASAARMEGQTV >gi|224461045|gb|GG657759.1| GENE 1652 1710378 - 1711403 933 341 aa, chain - ## HITS:1 COG:BH3732 KEGG:ns NR:ns ## COG: BH3732 COG1879 # Protein_GI_number: 15616294 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 281 1 267 311 74 25.0 2e-13 MKKKVVSVILCVAMIAAMVVGCTTKAPTSGGDDKKDDGEKKDSYKVGITIQSLKNDYWAG VMGKLEELLKEKGWDYTLQDCSDNAGTQVSQVENFITSGCDMIMVHPSDADALETVCQQA MDEGIKVMCWDDPMENTTANWILDNTALGNEIGKTASAFINEHYTADKPAEVCVIGKPST KVLLERANGIKEGLEENCDKGNYKIVAEVDGLEANEAQTNVESVLQANPDCTVFVGVGAG AMIGSNEALLQKFGGAGKIPENVGVITTDVTMQQLESLQAGDEAVRAIVGFEGSSTDTAK ACLEMYERILSGEDFSGDKHNVVRPVKAIDKDSVEEIIKGM >gi|224461045|gb|GG657759.1| GENE 1653 1711473 - 1712249 233 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 12 254 4 239 242 94 29 2e-17 MGIIESMRLDGKAIYVTGAASGIGKCAATAFAEAGADVAIVDINLEGAEKVAKEIAEATG SRTIAIQCDVTKKDQVEAMVAKVVDTYGKLDACYNNAGIAVNAPAEEMTFEQWQKVIDIN LTGVFLCATAAGRVMLKQGHGSIINTASMSGHIVNVPQPQCAYNASKAGVSQLTKSLAVE WAKKGVRVNCISPGYIGTELIMNADHLKPLITQWNAMAPMGRLGKPEELQSILVYLAGDT STFTTGSDIIVDGAFTCF >gi|224461045|gb|GG657759.1| GENE 1654 1712591 - 1713640 1507 349 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 8 348 6 346 347 308 45.0 2e-83 MDGMMKVAVMNGIGEMGYTERPIPQAKDDEVVVKLEYVGICGSDMHYYEMGRIGDYIVEP PFVLGHEPGGTVVETGKNVKHLKPGDRVALEPGKTCGKCRFCKEGKYNLCPDVVFFATPP VDGVFQEYVAHPEDLCFKLPDNVSTLEGALIEPLAVGFHAAKQGEAHAGQTAVVFGAGCI GLVSMMALKACGVSRVYVVDVMEKRLEKAMELGADGVINGREEDVLEKAKELTGGEGFDL AIETAGTEITTNQAVQAVRKGSNIVLVGYGKTGMMNVMMSLALDKEVTFKTVFRYRHIYP MAIDAVAQGKVNLKGIATHIFDFDDIQTAMDRSVNEKSEIVKAVVKIAK >gi|224461045|gb|GG657759.1| GENE 1655 1713668 - 1714840 1131 390 aa, chain - ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 14 384 9 375 385 123 27.0 5e-28 MIQKTNNSEVKRLNRNRVFRYINSKNRTSMPDIAAALDMSGPTVLQIVKELREARVVCEA GEFESTGGRKARALAAVRDARYAVGIEITRHHIGMVLTDMTETVLKYERTRKPFVCEDEY FKQLGEALDEFLGDDGTVKEKIAGVGISVPSIVDGAANRITYSRALNLYDIDGDVFSRYI PYPCVLLNDANAAAVTECIADSQLESMIYLSLSNTVGGAVVFRQDPAREDASGPLNSVFE NMYIGKHWHSGEFGHMVIHPGGKTCYCGKKGCVDAYCSALCLAEHTDGYLERFFDRLEDE DAELMEVWETYLDDLAITVDNLRMCFDCDIVLGGYVGSCIGPYMKELQKRVEEKNIFEGN GEYVRACKYQKAASALGAAVYYIENFINSI >gi|224461045|gb|GG657759.1| GENE 1656 1715017 - 1716102 950 361 aa, chain - ## HITS:1 COG:BH0491 KEGG:ns NR:ns ## COG: BH0491 COG0006 # Protein_GI_number: 15613054 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Bacillus halodurans # 2 360 6 360 360 190 32.0 5e-48 MDAVERIRAWLEEKDYDGVLLNRRDNYAWVSKGAENNVVDNSENGAAYYVIRRDGIDLLA DSSDLSRMDEEQNPLGGKPVLIPWYEPKELYIADHIRRGRFVSDTGIAGTVNVQEELVDL RLKLTEDEVRRYEEAGALCAHIVEGVCKEAEPGMTEAEAANMLRCRCISQGISPDCVLVG SDERILSYRHPVPTGKKIENSLMVVLGGEKYGLNVSLTRMVYFTPVPEHIMERYEKTQYI FACMQMMMREGLTYKEYFQNVMELYREAGYGGEWKMHHQGGPAGYGCREFIVTPDSSKTI HTGQAYAWNPTILGTKCEETTFLDEDGLRILTKTSKWPRRIINTPYGSTEAAEILERQPG I >gi|224461045|gb|GG657759.1| GENE 1657 1716117 - 1717181 1270 354 aa, chain - ## HITS:1 COG:yphC KEGG:ns NR:ns ## COG: yphC COG1063 # Protein_GI_number: 16130470 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 7 361 364 312 47.0 8e-85 MSEKIPEKMLGMKLPGGAKVQPVTCDVPKPGHGQVLLKMKAASLCGSDLKYIYFEHTDKT GGARYDDVIAGHEPSGQIVEVGEKVDDFKAGDRVVVYHIQGCGYCDECRKGFYINCQQAE RRAYGWQRDGALAEYMVADAATCIHLPDFLTYEDGAMIACGFGTAYQGLLRAGVSGNDRV LVMGLGPVGQAAVILAKALGAQTIGVDISEERMEMARKAGADEVVLGDDNAVDNIMKLTG GKGVEAAIDCSGSSIGRHRCLEAARMWGNVVFLGEQGTVTFEPSPLLLHKNLTLHGSWVT SVGNMEKLVELLDRKKIHPGQIITHRFPLRETDKAFEVFATGRTGKVCINHEME >gi|224461045|gb|GG657759.1| GENE 1658 1717421 - 1718359 897 312 aa, chain - ## HITS:1 COG:no KEGG:BALH_3339 NR:ns ## KEGG: BALH_3339 # Name: not_defined # Def: triple helix repeat-containing collagen # Organism: B.thuringiensis_AlHakam # Pathway: not_defined # 30 171 677 845 1269 127 51.0 6e-28 MEENANFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGPNGNWYLGETDTQVAAAGP KGEKGDTGPMGPQGATGATGPQGLTGPQGLTGPQGPTGATGPQGATGPKGDTGATGPQGP TGATGPKGDPGAAGPQGPKGDKGDTGAAGPQGVQGIQGPKGDRGEQGPAGPVNIANDLET TVEGYALDARQGKELKDMIGQHSIVGTGKNKNGYYRKFADGTLEMWGALSVSDASVTTAS GSLYSTPGYVFNLPYTSLTGVSVSLNFAGRNGVWPSVSTGGDQRSTVGYWLLFTVSARIS GTLHYHAFGTWK >gi|224461045|gb|GG657759.1| GENE 1659 1718770 - 1718904 67 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569576|ref|ZP_03778601.1| ## NR: gi|225569576|ref|ZP_03778601.1| hypothetical protein CLOHYLEM_05670 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05670 [Clostridium hylemonae DSM 15053] # 1 44 41 84 84 83 100.0 5e-15 MQFITLLFVSGRGSYGLNSDHKQTYSVYVNEDRYEQAVKLISRL >gi|224461045|gb|GG657759.1| GENE 1660 1718912 - 1719799 913 295 aa, chain - ## HITS:1 COG:PA3571 KEGG:ns NR:ns ## COG: PA3571 COG2207 # Protein_GI_number: 15598767 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 13 287 22 297 307 162 32.0 8e-40 MNEITGKADGFKDEKYIIIPTESFSDYAEHPLVRTIYPTDVGFFPRARAHYREREDGAQQ YILIYCTEGKGCIEVEDRTYHIGRSDAFCIPKGRRHKYYADPEDPWSILWAHFKGEVTLC YPLEECRVVHMNSRQSDNRMMVLFKLLFRVLERNYTLGNFIYISQVLSLILSEIYFREKT DESTVQDRHVTMVIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQTGRSPVEFFIHL KMQEACKLLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYKNGDYFYCE >gi|224461045|gb|GG657759.1| GENE 1661 1719993 - 1723265 2577 1090 aa, chain + ## HITS:1 COG:no KEGG:BVU_0750 NR:ns ## KEGG: BVU_0750 # Name: not_defined # Def: TPR domain-containing protein # Organism: B.vulgatus # Pathway: not_defined # 5 1085 17 1107 1113 1115 51.0 0 MSFEKVHVWEENVTIPTYKVYPAEKSPLFIENRAYQGSTGKVYPLPVTEKISDEKEDVSY RAVYLENDYLLVMVLPELGGRIQRALDKTNNYDFVYYNHVIKPALVGLTGPWISGGIEFN WPQHHRPTTCSPTDFYWEENADGSSTVYVSEIDKMYGTKGMASFTLHPGKAYIEIKGRLF NRTDTPQTFLWWANPAVPVNDYTYSVFPPDVHAVMDHGKRAVSTFPVATGEYYKYDYSEG IDISCYRNIKVPTSYMAAHSDYDFIGNFDEQVDAGLLHVADHHISPGKKQWTWGNSDFGQ AWDRSLTETDGPYIELMTGVYADNQPDFTWLKPYEEKTFTQYFMPYKHVGRVKNATKDAA IGAELGGGRCILRAYASGEYKDAVITVKKGGDILFTDRADLTPAAYYEFSFATELPALSG CTAELRDAGGRLLVSYTEKAPELEPTPEPAEPLLPPEQLKTTEELYLGALHLEQYRHATF RPEDYYLEGLRRDPSDIRLNNGYGLLQYRRGNFAESITYFKKAIEKQTWKNPNPYCGESY FNLGLALVMTGEEDAAFDAFYKSTWSYETQSSGFYWLACLSCRKGLFREALEFADNSLLR GWHNMKARTLKAALLRRLGKDNTSLLAETVKIDPLDMGTRYENGLRLGDLTEWKTTMRGP AHNYLELSLDYMKAGLYEDALRILSSCPDTSPMLSYYEGYIHEQAGSLTEAVRMHRLGEA ADPSYCFPNRAEEILILESAVRLLAEAPLAHYYLGCLLYDKREYEKAAAHWEVSAELAPD FAMNWRNLAIYCYNKQKDIEKALSCMKTALELDPSSSRFLLEYDQLCARAAVSAEERLDL LERNLTLVTYRDALYIEYITLLNNTGQYDKALGCLTGHQFHPWEGGEGKVSTQYRFALTG KAVRLLKSGSFDEAIGLLEATKEYPVSLGEGKLPNVQDTIADYYIGRAYKAKNDPKNAEA YFKKASDGLTEPSSVLYYNDQPSDTILYQGFANEELGDMAAAKKCYHQLLAFGEKHLFDD VSYDYFAVSLPEIEVFPEDIKTRNDIYCKYLMALGRLGLGEKEKAALLLGGILDVRPDHQ GAVRHLAMTR >gi|224461045|gb|GG657759.1| GENE 1662 1723318 - 1724001 677 227 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569579|ref|ZP_03778604.1| ## NR: gi|225569579|ref|ZP_03778604.1| hypothetical protein CLOHYLEM_05673 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05673 [Clostridium hylemonae DSM 15053] # 1 227 1 227 227 456 100.0 1e-127 MAKYVCAMCGNTLGMMESINREFQDDGKGRGLCLKCHQYFTKNVAGRLEAVNGPREFKMV QESVLDQVKTEKGTAGYEYVKDFFKYKEKEFASGGENGRWEICPVCRDARDPQDDVCPTC GYLYSDRKVLSREDYIRAAEGRYEQYQKNPLYEYKVEIIVDSALTGTVRKEELQRMLSVY AMDGWRLHTALTNEAGKTVLAAAGVGANATVDQTVLIFERCIKSREN >gi|224461045|gb|GG657759.1| GENE 1663 1724032 - 1724793 947 253 aa, chain - ## HITS:1 COG:CAC0231 KEGG:ns NR:ns ## COG: CAC0231 COG1349 # Protein_GI_number: 15893523 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 2 253 4 254 254 133 35.0 3e-31 MEERRRTILRELDEKGRVRVAELSRELGCSEVTIRNDIKNMDMEGLLQRVHGGAIKREES PVRKYSAESIYRHTDRKKKIAACAYDYIEDRDTIIIDDASSSFYLAVHIKNHPEKRVAVV TNSLLVGNELSGAKHVELYMVGGHVGGHLAATMGDAALENMQNFHVDKAFIGVHGINFEA GLTSIATPQMQVKHAILNAAKEVYVLADSSKFGGGYLSVICPLTDVHLIITDDEVAKENV KIAKELNVPLVIA >gi|224461045|gb|GG657759.1| GENE 1664 1724833 - 1725336 613 167 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0345 NR:ns ## KEGG: Cphy_0345 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 167 1 167 168 67 26.0 2e-10 MEEKLTVQMTKEALFDFLLYHTYSKFSGFLTNVLGAAVGIMGIILLATGKITPVYLLFYL AAAAAFIAFTPLQLKHRAKKQVELNREYQTEWNYTFDNEGITVIRGEKTENVAWDKIERV VTTPKTIGIYYGKEHAFIIPKQAFGDRFMAVMKIIAQHIDPQRVRLR >gi|224461045|gb|GG657759.1| GENE 1665 1725432 - 1726481 1234 349 aa, chain - ## HITS:1 COG:no KEGG:MS0384 NR:ns ## KEGG: MS0384 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: M.succiniciproducens # Pathway: not_defined # 13 336 29 352 367 429 68.0 1e-118 MGEQTTEVKKTKDLDLLNKMKKLPGGLVIIPLVIAVLIATFVPQAFQIGGYVTALFYEGN SATMGFFLIVCGSTINIKQVGMPLYKGVTLTGMKLLLGILFGLAVGRICGPDGFLGITPF VMIAAITNSNGSLYISLSSQFGNATDTGAISILSLNDGPFFTLVALGATGLASIPINSLI ATLVPILIGFIWGNLDAGFRKACATAQPIVTFFMTISIGAKTDVKTIVTAGAAGIVLGLI SAALAVVFFFVFNLLLPKKERNAMGAAVGTTALNSAMTPAAVAEADPTMAQYTDMATAQC ATASIITLFLCPFIVAFFDKMMQKKQKGIYSPEGWAHYKVTGEAAPSEM >gi|224461045|gb|GG657759.1| GENE 1666 1726503 - 1727846 1663 447 aa, chain - ## HITS:1 COG:FN0227 KEGG:ns NR:ns ## COG: FN0227 COG3395 # Protein_GI_number: 19703572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 7 432 7 413 425 166 29.0 7e-41 MPLIGAVADDLTGATTTGVLLARSKARTAVFFNEEAAEKAEGLDELDAVLISSNSRALPA NEAYEKVKSGTQALKRMGVKYFTKRIDTTLRGGVGIEVDAMLDTAGEDAVAVVVPAMPQS RRILVGGYSVIDGVALVNTPVAQDVRTPVKENYIPRLLCGQTKRKVGLVTLDKVLKGEEA VRKALEEERNAGCGVIVVDAITLGDVEEIAKACIELRWNVVAVDPGPFTSKLAFHRGLIK EEEPNVPPETDENGKTVLIAAGSATPVTKKQMEVLCEDKRHVRISVDPLPLIEGGDAAMD EAFKAVHKAVELMESETQPRAILFETALHGELLNLDEEDNKRHYAGGMSANRINAGLGTI ISQVLEQAGREKVAGLYTTGGDTMVNVCYQLGVECIEVMDYVIPQTDVGRLVGSYDGLPV VGKGGLTGNDNTACDIVSRLFRESARK >gi|224461045|gb|GG657759.1| GENE 1667 1727879 - 1728898 447 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 1 319 1 316 346 176 35 3e-42 MSEQFKPVTAITMGDPAGIGPEIVVGTMLSKEIHECCKPFVIGSRAIMEKAAKVLGKELQ YNLISDPSEAKYEYGVVDIMETGDYDTDSIEWGKEQKLAGQMAIDWIMKSIELGLAGKID AVSTSPIHKGAIKLVGVKEPGHTEIYQNATNSPYALTMFSCHKLRVFFVSRHMSLVDACH YATKDVILENVINIDKELRKVGIENPLIAVAGLNPHNGDNGLFGTEELTDIGPAVEAAKE KGINAVGPCPADSVFNIGKSGKFDAILSLYHDQGHIACKTLDFEKSVTLTFGLPFIRSSV DHGTAFDIAGKGIAGSISLIESTKVVAEYAAKQHEREEN >gi|224461045|gb|GG657759.1| GENE 1668 1729246 - 1729992 840 248 aa, chain + ## HITS:1 COG:PM1640_1 KEGG:ns NR:ns ## COG: PM1640_1 COG0149 # Protein_GI_number: 15603505 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Pasteurella multocida # 1 245 13 261 270 293 60.0 2e-79 MYKNIHDTVEYLQDLVAYTKDISRDEIELFIIPSYTTLESATKNVDRTYVKLGAQNMCWE DEGQFTGEISPLMLKELGLDLVMIGHSERRHVFGETDMEENKKVKAALDHGFTTLLCIGE TAEEKNYGISAEVLRTQLKVGFHDVPKTQIPNIWVAYEPVWSIGVNGTPATADYAEEMHK VIKQTLLEIFGSAGADIPVLYGGSVNPGNANDLIVQPSIDGLFTGRAAWQADKFDKLIRD AKKTFESL >gi|224461045|gb|GG657759.1| GENE 1669 1730062 - 1730901 832 279 aa, chain - ## HITS:1 COG:SMc01370 KEGG:ns NR:ns ## COG: SMc01370 COG3706 # Protein_GI_number: 15965047 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Sinorhizobium meliloti # 17 269 5 265 455 90 27.0 2e-18 MEGQDVDNVDNINKKTILIVEDMGMNRQLLSVILGNDHHILEAENGLEALGILEKEYRNI ALIMLDIIMPVMDGFAFLERVKQIHEYKDIPIIFVTAETYKENILKGIEYGVCDVIAKPF DPYLVTNRVDQLIRLTENQKRKRAGRPQPTRQKERGLVLLVDDAEMNRVILKEVLRGEFG ILEAADGQEALEHLDSRGDEIAAVLLDVIMPVMDGIEMMKEARSRSLLENIPVIAITAEN SAVKMQRIKDLGICEIIHKPFDPSVIKNRVNNMIELYEM >gi|224461045|gb|GG657759.1| GENE 1670 1731006 - 1732751 2163 581 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 331 6 337 337 312 51.0 1e-84 MRKIINDADNVVQEMMEGYVSAYSRYYRKHPEVNGVILKQRRKDKVALVIGGGSGHEPMF SGFVGKGLADAAACGNIFASPDPNTIYETAKAVDNGKGVLFVYGCYAGDNLNFDMGEEFL NDDGIRTAHVRVWDDVASAPRDRISDRRGIAGDVFVVKTAGAACDAGLDLEEVTRIAEKA RDNTNTIGVATAPAQLPGVDKPIFELGEEEIEYGMGLHGERGVLRTKWEPADVLAEKMYE QIKEDTGLGEGEEVCVLINGLGSTTITELAIVFRKVKELLDKDGVKVYDTDLNHYCTSQE MGGFSITLFRLDEELKKYYDMPCYSPYYAKGELTGSAYEAEDEEAEAEPEDTGDEAGDEE EPVLSRTKKGTITELTAEDAREMLIYIADKVIAKKPYLTEIDSAIGDGDHGIGMAGGMKK ARAKLLRMKGEENVYAIFEAAGKAMLLSMGGASGVIFGSLYLAGARDTEPAASITAGELA KMERKSLAAIKERGKAEVGDKTMVDALAPAVEAMEANSGKGLLEMTKAAEEAARQGVEDT KNYVAKFGRAKSLMERAIGYQDAGATSVWLIFQGMREFIEG >gi|224461045|gb|GG657759.1| GENE 1671 1732896 - 1733477 546 193 aa, chain - ## HITS:1 COG:CAC3448 KEGG:ns NR:ns ## COG: CAC3448 COG2755 # Protein_GI_number: 15896689 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Clostridium acetobutylicum # 1 192 1 190 190 107 32.0 9e-24 MRIVCIGDSLTYGYGVKRASVWTALASRAMPGSEIVNKGINGDTTGGMLSRFETDAAGSG PDVIFVMGGSNDIFFSGSIAEAKCNMAAMVFRCMHRRIRPVIGSPLPVYEAGLSDKWKAF ASGECVGRLLGEYSDWLMAFADSFGVPLIDFRQSIPDDPAGTASFYLDGIHASEEGHRRM AGLWAESIMKLVE >gi|224461045|gb|GG657759.1| GENE 1672 1733494 - 1734495 1144 333 aa, chain - ## HITS:1 COG:SP1160 KEGG:ns NR:ns ## COG: SP1160 COG0095 # Protein_GI_number: 15901025 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Streptococcus pneumoniae TIGR4 # 7 328 4 327 329 280 44.0 2e-75 MKNNYLVVNNCTDPYYNLALEEYLLTHHMEGVIVMLWQNDNTIVVGRHQNAMEEINQQFV KEHGIRVVRRTTGGGAVYHDLGNLNYSVIADRGEEGRDEMKHFTGPVIEVLRELGAKAEF SGRNDIMIEDRKVSGTAQRIYKNRILHHGCLLFDSDLSVVSKSLNVRSEKFNSKAVKSVK SRVGNIKDYVPDEITMDVFRERLAEKMLEDSGYDMLKLPEKELVQIERLKREKYETWEWN YGQPINCAIHNYKKYEGGTVEVYMNVREGRIEECLMYGDFMALRPASEVAGRLTGCRYRY EEVLEVLQEFRIRDYFGTIEANEVAACICCVPE >gi|224461045|gb|GG657759.1| GENE 1673 1734485 - 1736035 2028 516 aa, chain - ## HITS:1 COG:TM0284 KEGG:ns NR:ns ## COG: TM0284 COG1070 # Protein_GI_number: 15643053 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 4 502 2 501 506 335 36.0 1e-91 MGKYMIGLDYGTGGGKACIIDEHADVLAYSFQEYPIYVDKPSWSEHDAENYWTLACGTIR DCMKKAGISPQEIRGIGISSAQPCLVMVDKDGRPINRAYNLMDRRAVKEVEWLREQIGVD EIFQINGNRIEDYPTMVNIMWEKNNRPDDYARIWKTLTIDGFVRLRMTGRAAMSYSHGGF WGVAYDIRKKEFNRELMDKLGIDMELMPDLYPCEYIVGTVTERAAEELGLVPGIPVCAGQ VDCNAGFVGGGAIAPGDVQINLGTCGVMGVVNDSREFIDLVCNDAYTTNSCNDFISIAVV LTGGQVLRYIRDNFCQMEHATAKLMSDMDVYDIMNKEAEKVPAGSEGLIVLPYLMGERTV LWNAYARGTVFGLSLHHTKGHLIRAMMEGVAYALYDNYRLMLEKGIKANAPIILNEGGAK SKLWRRIITDVFNVPTAFVENRVGAPYGDAILAGVSVGVFEDFSIAKEKVNYIDYMEPNQ ETHERYMEYFEIYRNLYAHLKNDFTDLYQVAKKYEK >gi|224461045|gb|GG657759.1| GENE 1674 1736048 - 1737439 711 463 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 9 459 3 457 458 278 34 8e-73 MEDNRVKEEFDLIVVGGGPGGYSAAITAAKKGLSVVLFEGGHIGGTCLNVGCIPTKYLLD KAAAMEKVRALTKQNIFKECGLFSFRKIQKGRKEVVDKLVAGVDHLLKVNNVKVVRGFAS VSAPGEAECGGQVYKGRDLIIATGSVSASIPIQGAEYTITSTEALELEKVPARLVVIGGG VIGMELASAYSSLGSEVTVIEVLPELFPAEDRQAVAYMTRSLKKRGIHILCGTKVQKVEK TKDRFRVIYEGEENGQADADVVLMATGRKPNLNGIDTGAAGIALTAKGEIQVDEYMETSV PHIYAIGDAAGGYQLAHAAYAEGEAAVRNITSRREPADLRVMPRCIYTMPAFAAVGMSAA KAEEEGIAAVTGEFAYSANGMALAEGADGLVRVVMDRERKTTLGVHITGENAPEMIAFAS EAVRNKTTLDEWERMIVAHPSLSEMIREAALDCFGKSVHKAVK >gi|224461045|gb|GG657759.1| GENE 1675 1737457 - 1738719 1187 420 aa, chain - ## HITS:1 COG:AGc2641 KEGG:ns NR:ns ## COG: AGc2641 COG0508 # Protein_GI_number: 15888757 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 420 10 457 457 221 33.0 3e-57 MIKEITMPAGGQTTDTSTVGAWLVKKGDKVKRGDELLTVETDKATLSVESFAKGTVLAIL VEEGDSAAAGEVLALIGDESDRQEAEARAGGGSASGHGAAAMPVSQTEEEEDEYQPIDPS GPVRYASAPKQEQAPSVHTDTGEVKAMPNAKLLAREHGISLSDAAAFTGKHILKRSDVQI YIENAPRRAVAEGAAVTEVPLTSMRRTIARRMLESSQNIPVFRATVEVNMERCIAFRAKV NDNKAGFKISYNDILFKCMEAAVRKYPYVNASYTDNAILLHKDVNIGLAVSVDDGLIVPV VRAVNEKNITEICEANKANISRAREGKLTADDMSGGTITLSNLGMYPVTQFDAIINPPEV CILAVGAVQEKPVLEDGQWSAVPVMNLTGSFDHRVVDGAYGAQFLAELKSLIEDPAMALL >gi|224461045|gb|GG657759.1| GENE 1676 1738734 - 1739648 1154 304 aa, chain - ## HITS:1 COG:Z5687 KEGG:ns NR:ns ## COG: Z5687 COG0191 # Protein_GI_number: 15804678 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 EDL933 # 1 257 1 249 286 129 35.0 5e-30 MSRITVKELLGHALENKYAVGYFESWDLQSTLAMVRAAENVKSPVMIGVCGTYVGEAKRR YKESLAVYYAMLSKIAEEAKVPVALLLNESDDEAMVIEAAETGFDMVMFAPVFASDALPL QELTEIQKRIVEKAHAKGVAVEGEVGELPLFNSATGEIHEGEDTDPELCRSFVKETGIDA VAVAVGNCHLKEDGKVTINYDALRTLAKEIDIPLVLHGGTSIAHEDLSKAAAMGVAKVNF GTGMKRAAINAVKAYLAEHDVDHMDPNDVLGRGAGKDMIVKEQEAVIAYVEETIRALNGE NKAF >gi|224461045|gb|GG657759.1| GENE 1677 1739682 - 1740695 1170 337 aa, chain - ## HITS:1 COG:BH0777 KEGG:ns NR:ns ## COG: BH0777 COG0022 # Protein_GI_number: 15613340 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Bacillus halodurans # 1 333 1 322 327 323 50.0 4e-88 MAEMSIADALKQAIQEEMRRDNTVFCLGEDVDIKGGMGGAFTVTKGLLEEFGPERVINTP IAEILISGVCVGAGITGMRPVADLQYGDFLFCMMDQLVNQAAKMCYMSGGTVHVPMVMRA PCGATNRGAQHAQSLESYFTHVPGLKVICPSTPYDAKGLMKQAIRDDDPVLVFEHKLLYG GTRKEKDAIKTSGEVPEEDYTVEFGKAAVRREGSDVTIVANLLMSYRAQEAAKKLEAEGI SCEVIDPRTLVPFDYETVTESLKKTGKLLIVHEDHQNNGWGAQVAAHVAEHNIFDLDAPV KIVAAYDTPVPFASPMENFVIPSTERIMDAARELAEF >gi|224461045|gb|GG657759.1| GENE 1678 1740695 - 1741678 983 327 aa, chain - ## HITS:1 COG:BH0776 KEGG:ns NR:ns ## COG: BH0776 COG1071 # Protein_GI_number: 15613339 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Bacillus halodurans # 3 321 9 325 326 310 50.0 2e-84 MQKMPERERAVGMYRDMYLIRQYEETIYYLFLEGIMPGTIHQSHGQEACAVGMIYDLRKE DYILTTHRPAGHDLAKGVSLRSMMCEMFGKAEGCCKGKGGAMHTGDISVGAITANAIVGG NLPIAAGVALRCKLMKTDNVAVCFFGDGASNEGAFHEALNAAAVWKLPVVYVCENNLYSA TTSIKMTCNLENVAADRGPAYGIPAEVVDGNDVLAVNEAAARAIERARKGEGPTILELKT YRIGGHSRNDACGYRPEDEEKEWFSRDPVQSFRKRLLEEEIISEEELIRIEEEIEAEIEA EVEYAKNSKDPDPESALRDVYWEGGNA >gi|224461045|gb|GG657759.1| GENE 1679 1741943 - 1742734 749 263 aa, chain + ## HITS:1 COG:lin0370 KEGG:ns NR:ns ## COG: lin0370 COG1349 # Protein_GI_number: 16799447 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Listeria innocua # 4 239 5 242 254 111 35.0 2e-24 MKKERHARIIELLENRMVCTPKELADELACSEMTVRRDLNELEAISLVRRKHGCAFLVKA AKPNYFLEQIDEQQYEKEAIAKAALQFVHPYSVICIDSGTTAHTVSRFLPDNIPLSVITS NLMTAVELSNKENIQTYLVGGMLYHRTKSIMTESAELLTQHPADVAFISARAFRIPGGAF EHTYPLVATKKALVSIARKTVLLIDHTKCEHVSLCNSIPLNQIDVMITDNKTSPEIIKKA VGLKKEVIVVDPETSAIEHHYKV >gi|224461045|gb|GG657759.1| GENE 1680 1742779 - 1743447 711 222 aa, chain - ## HITS:1 COG:CAC3021 KEGG:ns NR:ns ## COG: CAC3021 COG0406 # Protein_GI_number: 15896273 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Clostridium acetobutylicum # 1 206 1 205 219 123 35.0 2e-28 MKTKVIMVRHGETEWNVLCKFLGSVDLPLNEKGRRQAGYAKEALKEEPIDVIYSSPMKRA YETGEIIRGDRALPVRTDDGLREICCGAWEGLDGNEVEEKYPGQIALWGSRPEEIRIEGG DTFQEVSERITDAFWRIVNENRGKTILITSHMICLTLLMMRFEERAVNELWEVKPIGNAA LNIVEVSEDDKVEITAWSDDSFVPEEDRKGSALVAGRNYAEE >gi|224461045|gb|GG657759.1| GENE 1681 1743454 - 1744206 1032 250 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569600|ref|ZP_03778625.1| ## NR: gi|225569600|ref|ZP_03778625.1| hypothetical protein CLOHYLEM_05694 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05694 [Clostridium hylemonae DSM 15053] # 1 250 9 258 258 370 100.0 1e-101 MILAALMLGGCSGRLSDEYITIDKYEGIEVEKAEVTDTTDEEIDKVVARMMEGYTAQHDL PEDTKITDAIVKETLSDTAETVEQYRLELKKQIDAAKEKAARTKVETKVWEKVIDNSEVK KYPADRLKEVEENLKSQYEDYAKEAGTEYDAYMEALGMTDKDIEKAAKASVKQELAAEVL ANKYGLKPNEEDFQTALEAYADEYKFANVDLLLEAVPEEEMRLLVTQDNVKSWLADRCRL TEPSKKTEKE >gi|224461045|gb|GG657759.1| GENE 1682 1744367 - 1745254 1152 295 aa, chain - ## HITS:1 COG:no KEGG:Rru_A1362 NR:ns ## KEGG: Rru_A1362 # Name: not_defined # Def: xylose isomerase-like TIM barrel # Organism: R.rubrum # Pathway: not_defined # 1 289 1 290 297 277 47.0 4e-73 MKLGLNLSFAVKRFMDPEKLAFMCKNDFGTDHVQFTWDLIDPWWPEELRDVLALRYRDAF AKAGVHIDATFGGLASYSYGHFLAPSKEQREAAFLFFKRAVDLTAVMGAKVMGTPVGGMS YDDALDPARREALYEEMLDYVRRLASYGKEKGIEEIHIEATPLITEFPHSPEASVKMMKD LEGTDIPVGLLVDWGHALFRPLLKEEADIELWFHTCAPYIGSIHLQQTDGQWDRHWDFTK EGIVTPELIKRATADAGLDDVMQYLEVVTIFEDEDDAVYDGMKKTMDYLHRELGC >gi|224461045|gb|GG657759.1| GENE 1683 1745465 - 1746511 1462 348 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 346 1 344 347 258 39.0 9e-69 MEGKMKVCVLTGKQKLEWVERDIPQPGKGELQIKLEYVGVCGSDLHFYQEGQLANWTLDG PLALGHEPGGVVTGIGEGVEGFAVGDKVSIEPAVPCGQCEDCRKGNYNLCKNIKMLAIPG ERDGVNAEYCTHDANMCYKLPDNMTTLEGAMIEPLAVGMHATELSDARIGETAIVLGSGC IGLCTVMSLKARGVSEIYVADVMDKRLEKALEVGATRVFNSTRESIEEFAKTLPGGGADQ VYECAGNRITTLQSCRLIKRAGKVTLVGVSPEPVLELDVATLNAMEGVVYSVYRYRNLWP KAISAVSSGAIPVKDIVSHEFDFKDCIEAIDYSLNHKDEVIKAVVKFV >gi|224461045|gb|GG657759.1| GENE 1684 1746547 - 1747191 693 214 aa, chain - ## HITS:1 COG:SA1141 KEGG:ns NR:ns ## COG: SA1141 COG0554 # Protein_GI_number: 15926883 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Staphylococcus aureus N315 # 3 208 281 489 498 191 44.0 8e-49 MLSTHGVVTSLAWSMSGKVNYVLEGNLNYTGAVITWLKDDLRLISSPQETEALAREAVKD DRLYLVPAFSGLGAPYWDSRAAAAIVGMTRTTGRAEVARAGVECIAYQITDIVKAMSEDA KVKVEELRVDGGPTRNSYLMQFQSDIAEAAVQVPDSEELSGIGPAYAAGLALGVWDERIF NKLKRVKYEPKMDGALRDRKYEGWKAAVGTILTR >gi|224461045|gb|GG657759.1| GENE 1685 1747331 - 1747513 137 60 aa, chain - ## HITS:1 COG:no KEGG:GYMC10_3004 NR:ns ## KEGG: GYMC10_3004 # Name: not_defined # Def: transketolase domain protein # Organism: Geobacillus_Y412MC10 # Pathway: Pentose phosphate pathway [PATH:gym00030]; Metabolic pathways [PATH:gym01100]; Biosynthesis of secondary metabolites [PATH:gym01110]; Microbial metabolism in diverse environments [PATH:gym01120] # 1 48 26 73 312 72 72.0 7e-12 MALCSDSRGSASFTPFASGLPDQFVETGIAEQNLVSISAGLAKCGKKPTGGVPGLLPLAS >gi|224461045|gb|GG657759.1| GENE 1686 1747521 - 1747586 95 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKTANKQVMCEVLMEAAKKR >gi|224461045|gb|GG657759.1| GENE 1687 1747692 - 1748198 671 168 aa, chain - ## HITS:1 COG:TM0954 KEGG:ns NR:ns ## COG: TM0954 COG3959 # Protein_GI_number: 15644626 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Thermotoga maritima # 4 165 12 172 286 204 58.0 7e-53 MENLKALAYELRETVIDMIVEGKAGHIGGDMSVLEILTELYFCQMNISPENQDDPDRDKF VMSKGHSVEAYYAVLAEKGFFDKKELISTFSKFGSKFIGHPNNKLPGVEMNSGSLGHGLP VCVGMALAGKMNGQDYRVYTVMGDGELAEGSVWEGAMAACQYKLDLAS >gi|224461045|gb|GG657759.1| GENE 1688 1748240 - 1749226 1327 328 aa, chain - ## HITS:1 COG:BH3731 KEGG:ns NR:ns ## COG: BH3731 COG1172 # Protein_GI_number: 15616293 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus halodurans # 33 312 33 312 314 181 43.0 2e-45 MGKKIIDFFKSTAGMVLIVTILVGIAVHAATGNFFTAYNISTLTRAASFIIIISFGQTIV LLTGGIDLSVAAIGSVSSMFAATFMVEMGMNSYLAILISCLLGVVFGAVNGFFIAYLKIT PFIVTLATGEIYKGIVYIITRGMPIVGVPDDAQFIANGVIGGILPTIVIIMLIICVILTV MLRRTKFGRHIFALGGNRNCAKIVGIKTERVEMLVYCLSGLLAATAGVLMTCKLASFQAS IGANWVMPSVTASVLGGTSMTGGIGGVVGTVIGGLLSGTISTSITLLRVSSYWETVVTGG VVLIAVVIDAMKENPVMREKMVRMFKRK >gi|224461045|gb|GG657759.1| GENE 1689 1749241 - 1750728 1778 495 aa, chain - ## HITS:1 COG:BH2322 KEGG:ns NR:ns ## COG: BH2322 COG1129 # Protein_GI_number: 15614885 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Bacillus halodurans # 4 487 5 484 522 384 43.0 1e-106 MSEFVIEMKGITKTFPGTKALDKVDLSIKPGEIHALLGENGAGKSTLMNVLTGQYIMDEG EIFMDGSPVKISSPKDAFGKNIVLVPQELNLIPEATIEENIFLGNERAKGTLINWKETQK EAIELLKILNVEIDVTRKVKTLSAAYQQLVSIARALAYSPRVLILDEPTAVLTNKEAESL FESMQRLKKEGTAMVFITHHLDEVLEQADRMTIMRDGQLVKVAEVKDMTKEDIITCMAGK KVEQSRHIAREVSDEVFFEAKELNREGEFQDVSFQVKKGEILCVAGLVGAGRTEIFKTVF GITQKEPGGKTFVEGKEVDIRDPRVAIRLGMGYVSEERRHDGITPGMSVLENMMLPSYDQ LKKNGLINFKEASRIADDYIGKFKIKTAGQEQLIKNLSGGNQQKVIVARWMAKGIKMLIM DEPTRGIDVNAKGEIHQLVRELADNGVAVVVISSEMEEVLALADRVMVVHQGRIKGYIED VDMTTEEDVLKVAFQ >gi|224461045|gb|GG657759.1| GENE 1690 1751045 - 1752121 1163 358 aa, chain - ## HITS:1 COG:TM0114 KEGG:ns NR:ns ## COG: TM0114 COG1879 # Protein_GI_number: 15642889 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Thermotoga maritima # 73 350 39 323 335 112 29.0 1e-24 MKKKIVSLLLVAAMVLAMAGCGSKDDGKSDSKSDDKKTEDTQEAANAKALADQDFDTNYE PKKDEYKIYCTYKLVHAWYDAIEVGVKAAVEDFKDKGVTIDYEWYAPVEPDAVDQVNSIE TAVGQGYDLVAVDVNQIETTQPAVDDAVDAGVKVALFASSDIPDSKRSFFVGNNDNYGDG AAIAEAVCEKMGKKGKIAFLSGTIGASSHEQRLEAFYDTVEKYPDIEVVDDQRDNDFVEK AIEITEAWMQAYPDLNGILCNNMSNPVGACQAVKDAGKSGEVIIGGMDHDLRTFNYLKDG TLYVAQVQNCYDMGYKLIYNAVKCIDGEKVDEITDVGSTSVYQDQADEYIDMLFGEAK >gi|224461045|gb|GG657759.1| GENE 1691 1752468 - 1753481 1095 337 aa, chain - ## HITS:1 COG:TM1218 KEGG:ns NR:ns ## COG: TM1218 COG1609 # Protein_GI_number: 15643974 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 6 336 5 328 328 152 33.0 1e-36 MKYKAKDIARELGVSPATVSLVLNNKPGVGEEKREEILKKIIELDCEYLLKDGGVKRGDI GFVIYKCGGAIVDEYPFFNYLSESLNKAIERNNYTMTMMYLDKSMPLNERYLALENFRYA GYIVYAVEMYPEDMEIFSKLNVPCVFIDNPFPTLAVDTVTVDNYLGIYQGFEYLYQMGHR EFGYIKSKVPILCFEERMQAFEDCLRRRGLTFDTERIMEVGYMESETERDVGRYLDGHSK LPTAFLADNDLLACRAVQAMKRREIKVPDQVSIVGFDNRPICSFTDPKVTTVQLSGDEMG EMAVEMLMEKMSNKRKHTVKYKLGTKLIVNESVKKLV >gi|224461045|gb|GG657759.1| GENE 1692 1753513 - 1754391 952 292 aa, chain - ## HITS:1 COG:BH2675 KEGG:ns NR:ns ## COG: BH2675 COG1737 # Protein_GI_number: 15615238 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 3 263 4 263 287 134 31.0 2e-31 MGMIENGRNILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLKKLAVRCECGEATIVR LCKTIGVSGYAELKSLLETQLQLPAVKEESVRLSTGQGMGEIVARVFELNILNLRRTLEV AAVEEYENACEVLSTANKICFFAIGDAMFPCSYASLRFRRIGYDCYADSDADVQIVNACN MKEGDVAIAISHSGRTKQVVEAMRIAKSRGAVTICITKAGKSELTKYSDIVLYNVTTDTT VDKEIIARRVAEQAMLDAVYMGVLQKMEANSFARLQEVSENLKVNKLPDKNV >gi|224461045|gb|GG657759.1| GENE 1693 1754636 - 1755571 946 311 aa, chain + ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 2 304 3 305 309 259 44.0 5e-69 MKKSFRATLIDTVLQSANDYDNLVVLNADSARALKLTDFTAAYPDRMYGMGISEADMVGT AAGMAAAGLLPVIVGFSMFVSEKPFEQLRQAVAYPNLNVKVIATHSGLCVGQDGATHQAL EDMAVMRSLPNFKVYAAADVAETKAAVEAMLKHDGPAYLRLGRDLAEDIFDENKSFYPGG ADVLREGADVTIAACGLMVEQALLAASALRCEGINATVLNTYSVKPLPEALLLERARKTK AFVTAEDHSVIGGLGGAVCEFLSQTCPVPVIRVGVKDCFGESGTQDELYHKYGLTADHIV DAARRAVSMKG >gi|224461045|gb|GG657759.1| GENE 1694 1755581 - 1756411 794 276 aa, chain + ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 3 271 2 269 270 317 57.0 1e-86 MSRDIKELKTKANMIRRDILEMIYNIRSGHLGGSFSMVELLTALYFDEMHYDPENPKAPE RDRFVLSKGHTAPALYAALANAGFFPKEKLLTSFRRIDCMLQGHPDMKKTPGVEMTSGSL GIGLSAAGGMVLACRLRGLKSRVYCMIGDGELNEGQIWEAAATAAHYRLDNLTALIDVNG LQNDAETKKVKNMLDIRKKWEAFGWNTTEIDGHDFDAIFSALDAARACKGRPTAVIAHTV KGKGVSFMENVVAFHGKTPTEDEYRDGMKELKAAGL >gi|224461045|gb|GG657759.1| GENE 1695 1756426 - 1757952 1144 508 aa, chain + ## HITS:1 COG:TM0284 KEGG:ns NR:ns ## COG: TM0284 COG1070 # Protein_GI_number: 15643053 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 6 501 3 505 506 432 42.0 1e-121 MHEQIFIGCDIGTSSTKAVAADINGRILAHASVSYGLSKPHSSWAEQHPNVWLDAAVSAI RSVTGMLSSSDRIEAVCISALYGGTGAMCDEHMKPVRPSIIWMDRRAEKESRELKETIGE ENIFQVSGNGTDSYFGYTKLLWVKENEPSNWSRIRHILPIHSYVICKMTGEITVDYCSAG NVGGIYDYAEHSWSEEMCRTMEIPFHALPSHFYRPDDIVGTLNEEYQEKLGIHRPVPFCA GTVDCIASMLSAGIVHAGDNAAVLGTSLNWGFIHGKRPDNPSLISMPYCTDPLSVSYTYG GASTAGALPRWFAQNFLGEDSASAYDCLEQEIRGKAIGPGADGLIALPYFMGERTPIWDE NAAGVLFGLTLSHTRAHIYRAVLESVAYSLRHIMESMTDTSSGVSKIVLVGGGARSGLWK EIFADVTGLPVCTPVQDVEAPLGDAFLAAAGTGCISGYSTIKDWTAMREPVLPGPDRHEQ YSRYFALYKELYENLKETMKKRADMLRN >gi|224461045|gb|GG657759.1| GENE 1696 1758016 - 1758702 709 228 aa, chain + ## HITS:1 COG:SSO3071 KEGG:ns NR:ns ## COG: SSO3071 COG1878 # Protein_GI_number: 15899775 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Sulfolobus solfataricus # 50 224 48 241 243 103 31.0 2e-22 MKIDFNKVVELSHRMIPREEPFNLQTWVYDVDILGERGEPHSPGTWYVSGDVSFSTHCGT HVEFPLHHVEGGLNAATFPLTSLIGEAAVLDFTGKKAGDCMSLDEFKAYEDKIQEGDIVF LHTGLDKNWRTNDWEPYPYVACDAMEWLIHEKKIKAIGTDATSLENFNVPDQPNHNLAFK NNLAMVESLTNLDKIADERALIFMLPLKIAGIEACPCRIIAVKEGGIY >gi|224461045|gb|GG657759.1| GENE 1697 1758754 - 1759737 414 327 aa, chain - ## HITS:1 COG:lin1811 KEGG:ns NR:ns ## COG: lin1811 COG1680 # Protein_GI_number: 16800879 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Listeria innocua # 3 317 15 316 323 217 37.0 2e-56 MNIEELHSFIAEQQPNICQIAAYKDGAEVYSDEWNDYKKDDTCHVASVTKSIVSLLAGIA VDQKLIEDVNQPVLSFFPEYRIKRGEKTIQNVTIRHLLTMTAPYKYKYEPWTKICSSEDW TISALDFLGGRAGVTGEFKYATLGIHILTGIIAKVSGMKTVDFANQYLFKPAGVKVHENY LAETAEEHKEFTISKTPKDHIWFCDPQGTGAAGYGLCLSAADAAKIGQLCLDKGNCNGKQ IVSSKWIEEMTKPYHKCGEEFRNMSYGYLWWLTDDKNNCYSAIGNSGNVIYVNTSNNIVI AVTSYFKPTIFDRVEFVQNHIEPILIK >gi|224461045|gb|GG657759.1| GENE 1698 1759766 - 1760344 227 192 aa, chain - ## HITS:1 COG:no KEGG:SpiBuddy_2171 NR:ns ## KEGG: SpiBuddy_2171 # Name: not_defined # Def: hypothetical protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 1 185 1 183 186 93 29.0 4e-18 MPSSPKIPKETILQHALQMLIREGYSALNIKALAKEIGCSTQPISWHFGNMDGLRRALLE YALQYAKEKQTTSSSGMAAFYEAGTAYIDIAFDEPRLFQYLYMNNNEKVFIGGFDAITDT TEGGIVKAQIAQQLDINIEEVEIFCRNMMIYTHGLASFIAAGLITVTKQEVYEMMRQSAK GFLSQINAGLRK >gi|224461045|gb|GG657759.1| GENE 1699 1760485 - 1761129 905 214 aa, chain - ## HITS:1 COG:YPO3349 KEGG:ns NR:ns ## COG: YPO3349 COG2376 # Protein_GI_number: 16123499 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Yersinia pestis # 8 212 18 222 224 181 49.0 7e-46 MGGFKNADGKPVLLRMVKEIQDNKAYLGEVDGLIGDGDHGMNMNKGFTVFETRFKDEDIS FTDGLDELGMILLNEIGGSMGPIYGTIFMDMAEAGAELEEISLEDFGGMLTAGLDGLCGI VEAKVGDKTLVDTLSPAAKAVGDGAKAGEDFAGTLDKMKEAARAGRDSTKDMTAKYGRSS RLGERSRGVLDAGATSCCIILEAMADGIKEILNG >gi|224461045|gb|GG657759.1| GENE 1700 1761159 - 1762154 1215 331 aa, chain - ## HITS:1 COG:BMEI0396 KEGG:ns NR:ns ## COG: BMEI0396 COG2376 # Protein_GI_number: 17986679 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Brucella melitensis # 1 321 13 334 342 413 65.0 1e-115 MQRILNDPDDIVDEMLKGFLKAHSDIVEAAQNPRVVKAKNIPAGKVGVVTGGGSGHKPAF IGYVGRNLCDAAAVGEICSSPTAAAFLDACREADQGQGVACLYGNYSGDNMNVKMAVKMA KKAGITVKTVVANDDVASAPKDQREKRRGVAGEVLMWKVGGAKAAKGASLDEVVAAAQKA IDNTRSVGIGLTPCTLPAVGHPNFEIKDGTMEVGIGHHGEPGIEVCPLESAAQMAERMTD VVLPDYPFEKGDEVAVLVSGLGATPVMELYVLYDEIDKILESKGIRTHRAYVGNYFTSLE MMGATLTVMKLDGELKELIDMPAESMGLTQF >gi|224461045|gb|GG657759.1| GENE 1701 1762184 - 1762951 222 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 16 250 4 238 242 90 30 4e-16 MLKYYGADADFSLEGKTAVITGGAAGIGYATARFLAEKGVNICLADLNPDVDNIAKELDP KAIGVSGDATDAAYRERVLDAAAEAFGQVDILVNCAGIVALEKAELISEADWDRTMNVNL KASFMMAQMMGKYFIDNEINGCIVNMASQAGVVALDKHVAYCASKGAIIAMTKVMAYEWG RYGIRVNAVSPTVVLTELGHKAWDGPAGDAFKKEMPSERFAEPDEVAGAIGFLCSGAAAM ITGHNLLIDGGYTIK >gi|224461045|gb|GG657759.1| GENE 1702 1763013 - 1763981 1370 322 aa, chain - ## HITS:1 COG:BMEI0393 KEGG:ns NR:ns ## COG: BMEI0393 COG1879 # Protein_GI_number: 17986676 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Brucella melitensis # 41 288 20 272 325 210 50.0 2e-54 MKRKLLSVLLCLGLAAGLAVGCGAADKDAKKEKSDTEDSGKKVKIGMTLYSLKNEYTVRL ANAAEDEAEKLGIELTVYDGNYDASTQISQVETMIADGCDGIILNPQDAEACSPCVDKAV EAGIPIVGVNTRVKNDKLTSYVGSEDVKAGEMETQALLDKVGTDAKIVIIEGPMGQSAQI ERREGIQNILDKNPGVEVLAEKTANWSRSEAMTVMETWLQAFDEIDGIIGENDEMALGAR EAVKAANKDIPAVGVDGITDALDAVEDGNLVVSIFQNADGQARKAVQVLMDAVNGKDVDE NYWIEFEEVNKDNVADFRERAQ >gi|224461045|gb|GG657759.1| GENE 1703 1764050 - 1765009 1211 319 aa, chain - ## HITS:1 COG:BMEI0392 KEGG:ns NR:ns ## COG: BMEI0392 COG1172 # Protein_GI_number: 17986675 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Brucella melitensis # 15 313 22 327 334 238 50.0 1e-62 MEKSKSKQFNIKEFLAKYGVILGLVVIMIFFTVMKARFLTVTNMLNMLRQASINGLLALG MTFVVLTGGIDLSVGSAVGAAGMYCALVARTETGMPWYVALLTGLAIGLLIGTINGVVIA YLRVPAFIATLGMLSIARGITFMASDAKPIPGLSKEFLVIGGGSAGIIPIPVLILIGVLI VCYIILYKTRYGRYVFATGGNATSARVSGINIKMVICSVYMISGLLAGLAGVILTSRVTS GISQNGDGYEVDAIAAAVIGGNSLSGGRGRLWGTVVGFLIMGVMNNGLDMMAVSSYWQLV IKGIIIIGAVMLDSLNESR >gi|224461045|gb|GG657759.1| GENE 1704 1765027 - 1766508 1648 493 aa, chain - ## HITS:1 COG:AGl2903 KEGG:ns NR:ns ## COG: AGl2903 COG1129 # Protein_GI_number: 15891561 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 489 38 526 528 484 50.0 1e-136 MNLLEMKGIEKSFNTVKVLHGVDLILRKGTVHALMGENGAGKSTLMKVLAGIHKCDAGTV TVKGKSVDIQSPKHSQALGIAMIHQELSPVPEMTVAENIYLGREPGGRLFVDYAAMYRQT EELLESLKVHISPKEKVGSLKVADQQLVEIAKAISLNAEIIIMDEPTSAITDKEVDNLFS IIRDLKDQGKGIIYISHKMDEIFQISDDITVLRDGQYVNTWKAEEIDNNILIKNMVGREL TEIFPKSEVPISDTILEVRNFTLGNKFQDISFKVKRGEIYGIAGLVGAGRTELMHALFGL DRPDKGEIIFDGKPLHIRKPKDAIREGIAYVTEDRKQEGLVLEMSVGQNISLASMKELSR GLFINEREENSLVKDEIERLRIRLHSPRQLVKSLSGGNQQKVVLSKWMIKNPKLLILDEP TRGIDVGAKSEIYKLMCEYAARGNAIIMISSEMPEVMGMADRMLVLSNGKVGGELNRSEF AQESIMQMAVSHI >gi|224461045|gb|GG657759.1| GENE 1705 1766837 - 1767130 351 97 aa, chain + ## HITS:1 COG:no KEGG:ELI_0302 NR:ns ## KEGG: ELI_0302 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 91 1 91 93 112 63.0 6e-24 MRYKKADQILPQELLEKIQEYVDGTILYIPKTEEHKKNWGEGTATREELRIRNSRIYSDY LAGENMDNLSAKYFLSLKSIQRIIGQEKKKNEKGLNR >gi|224461045|gb|GG657759.1| GENE 1706 1767238 - 1767804 302 188 aa, chain + ## HITS:1 COG:CAC0055 KEGG:ns NR:ns ## COG: CAC0055 COG4332 # Protein_GI_number: 15893352 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 182 1 183 196 178 44.0 6e-45 MKKIVWNVRCGPPAVLRHCRGCGFKTEYICSGRFRINAQRKHLDIWLIYRCSRCGATWNL PIYSRVRPASVAPDLLGRYQSNDPGLALRHALDMGLLRANGAAVRTPVLTIDGEDLPPDG SAELHLACPHPLNVTVSSILRQKLSLSRRRLEQLIENGTLKGTSGADLMRQKLSGTVIVT VNGSVTGL >gi|224461045|gb|GG657759.1| GENE 1707 1767791 - 1769371 1835 526 aa, chain - ## HITS:1 COG:BH3842 KEGG:ns NR:ns ## COG: BH3842 COG4753 # Protein_GI_number: 15616404 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 3 523 1 517 530 139 24.0 2e-32 MGMFKILVADDEKFIRKGIVSILSGNLREEVIFVEARNGLEALEKSRTETPGLIITDISM PGCDGLEFIQRLKEINVNVPVIILSGYENFEYAKKAIKLGVKEYVMKPIKKNEFVELIHS YIADIRQAQQRNREEYLKRSENIRIMEKLKRDFLLGLLKCTSSEEARNYLIQLKELGMSF DSHLYMCVAVQYKVTPGNQEYIDFVVKNILDEFWGLRLDDEKVVNVVYSPGMVVAIFEGE SQNALLEQKKKLVRDAVTLLKQYCKTDIYAGIGDVAFDSVQLHVSLRHAMLAAGYKIFEE GDMVCVYQELEKGKETESPELVKRLKPIEEINIFDMLDRYRKLAYSGKTRRVLKVLEHEY EEVQNHINLVMSRKQTGKPVWDEKYKSFSCIWSVGEAGQELKERIELLKELYDDSGGVNE ALMRQMLDFVDEHITEELDLNTVAEKFHRTSGYVSTLFKKYTSGGFSAYLTGERIKIARK LLEDSSIPIQEIGELCGYNNPKYFSVVFKKVTGETPRGYREKLISR >gi|224461045|gb|GG657759.1| GENE 1708 1769375 - 1771168 2058 597 aa, chain - ## HITS:1 COG:BH0792 KEGG:ns NR:ns ## COG: BH0792 COG2972 # Protein_GI_number: 15613355 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 259 593 245 569 587 144 29.0 4e-34 MKKRYGVSMVWKMTIATMLLLLVPIFIICIIYIQMYQKTSMETADGKLASVLGSMQGRID ETLSDADVMLDELFYRQEFSYFMNDKNELSQREINYYTSSVQKELINNRYLYSNIFGNIG LYSLNRQVKADWQFPLKTLEEKPYYAEVTVDTQGAVYGAVRESELVFSTLDTNHIKVGNA NVYVLPIYKKVYAIGTKDVIGVVETDVDINRLMEVTSLRNDDSGITKIVADRRKNILINT GERDKSLEKRVMERIKEDRGTEELYIDGASYRMSYSVCPNTGLVNIALLSRDDIYSNIFN MVTGVLLITVMCLGVMGIITYLVISNMLNRLVVVDVMMGKVREGHFDVLIPEYGKSDEIS RIGSSFNLMVAHLNEVLEEKVRNEQAQKDAEIKALQAQINPHFLYNTLENMRMQCEIDGY YMMGNSLAVLGELFRYSIKWGNNEVAFELEWQNLKNYLYIMRMRYEDDLEDELECDYGLE DVIVPKMILQPLVENCFSHAFKTKMPPWKVRVSARREEGSLVIAIQDNGCGIEKEKVAWI QKCLDENKEIRCSQKQRKSIGILNVKQRIEMICREGSEVAIESTPGEGTVIRIIIVL >gi|224461045|gb|GG657759.1| GENE 1709 1771319 - 1773805 1834 828 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569630|ref|ZP_03778655.1| ## NR: gi|225569630|ref|ZP_03778655.1| hypothetical protein CLOHYLEM_05724 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05724 [Clostridium hylemonae DSM 15053] # 1 828 1 828 828 1628 100.0 0 MSTTKSPCPYQGPGKQNPANIGGYDIIRPTEDSADPDYWISSGNTTVYDAGYDTGQGGLI HFKDRLRISKGAAGECTAAVTLEVEASPLVFSYYPPHSLDVVFVLDVTASMMAGGSRKMA LAKRALSQTIQLLWRQNKETRVTIVPFARDAYVPLPGGGLSYDYLGTLFTWRRSTTSGNR IGQILGYRNGSYVSTTDIPDYMTQSAPIAASAGLSLYNYYNYYKIQYSDIFEDDGAARTD AVLDRYLSEIYMQDPGAYAGSFIQNVASGTPLDSTQLPYSMNDTGYENNTILDNLIWAIP YGEDTNTEAGLNEAYTLFNTPGFAQSDDILRRAVILITDGQANRSVNPAYPGVYAAPGST DSDFFPSVPGEPWRYFMYLQQTVNSLIAETAGRSATSEELVLALRRAWETAEKIKDPAGG NATVFVLGIEIDAQTPGPYTRDDVLNIMRTIASTGSYLHEAAENGSDNPIIEELERLAGY LLVLTGGPEAVITDTINTALFEYVPGSIRITGVQDKIILKSKNASDITDPNDPDYTVYTK PALLPDISDANVQNGVVTVSLGTIPYAPASPDSRTLIRLTYEIKNKGPAHGSHLHTNNDQ ETLITFREPNHLDAASAVLTYDNPPRILHFHTPVVSCHSDFTVEKYTGTEADNTIYKSLS VPACSDVYYRVAVHNYTNTSLRFPLLYEVQNVNTLKEAQASPSRRLLAEDFTVAAGGSRE FTFQYKTDCSDSVIPDFAVLETDTGPLYDNAVIEVQGGTSYYTVQYLNRCTGMRICPDEL VTGADACKPVDACSHIRCLPCWKFVSACPYRLEPCSGENIIKLYYIPR >gi|224461045|gb|GG657759.1| GENE 1710 1773914 - 1775401 931 495 aa, chain - ## HITS:1 COG:no KEGG:ELI_2097 NR:ns ## KEGG: ELI_2097 # Name: not_defined # Def: regulatory protein GntR # Organism: E.limosum # Pathway: not_defined # 8 495 1 485 485 466 50.0 1e-129 MKEGRANLEYDMLMYERVFRIIKNKIESGLLPPGTSLSSRADLCLEFGTSEKTVRRALAM LEEKGYIETSKRKRPVVAARTSAGHTATAKALQRIDTEITNDVLKTGVLLCYPVIKNGIS LCKKKDLEIPRKILENMDIDNASEFWKLSKRFIRFFVLRNENALILQAVDGLGLSDLRPL HDDGKIRARYYTQLKEFMKTLEAGGDPESVRFDDMSGMYGLADGDSPAFEVAADSAVLLG RKQLERLLQGADVRYSAVYMDIIGLISAGRYKRGDRLPPHKELQNIYGVSVDTTLKAVQI LQEWGVVKTVRGNGIFVEMDRIDIGKVHVPPHLIAYHVRRYLDTLELLALTAEGAAACAA GSITRSELQTVKEEIERLWNEEYLYERTPAVLLDVITRHIEIDAFNAIYMLLQKNFRIGR SIPGLLNTEKTAVNCEIHEQCIEVIETLSEGDRGKFPEKAARLFDKIYRLVIEECRRLGY YEAAAGVYDGTALWK >gi|224461045|gb|GG657759.1| GENE 1711 1775421 - 1778012 1815 863 aa, chain - ## HITS:1 COG:SMb20356_1 KEGG:ns NR:ns ## COG: SMb20356_1 COG0642 # Protein_GI_number: 16264090 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Sinorhizobium meliloti # 324 585 401 660 667 201 48.0 4e-51 MDTDKKKYKEHKISAFVSVLLLMAAVLCVSAAAVYQKVSERTVTNISKVYLQEMAAQVSS HFQTNLDSQFSQIRTIAGAVSENDLKDEESLKHFLAQAQENNGFTHIAAISDKGIAYSPD GTIPAMSKISDLDRLLEGSGELLSVNETIWESDTILLGTSMSPAPFKDGKLVAVIIGIQT SDIGSRLGLDGEKQTNSHSNIVTKNGDFVIKSIFSETVLYGSNLFSIYEQQAEFDEGYDL KSFRSAIEAGESGITLLSVGDHHEYLYYVPVHGTDWYMVTSMAYETVNDQIVYLSRFIVI VGVGIFFIILATVLTFFLLLRRSEKRSSELLRTEKERAETANRAKSDFLSQMSHEIRTPL NGIMGMVELGKHHIEEPDRMRNCLDKITLSSAHLLSLINDILDMSKIESGKIELHPERFD LGRLLRTLTTVFLVQAKNKQIDFQIFLYGELEEYLTGDALRLNQILTNLLSNALKFTPAH GYVSLNVEELQRDENGIWLRFEVRDTGRGIAPENLERVFEAFTQENSGIVREYGGTGLGL PITKNFVQMMGGSVTVSSEIGAGSVFTVDLPFSYEPENESEIVEPCGDGQPVLIINQIVE LETHLAVVLEKEQFQVDSTTDAETVLDRIQAAAEHGSPYEFCFVKWDFSEDMPALISNIR QAARNDRLKVVLTGRDQDELDDAASLCGADATLCRPVFHSDIAGLMARLTGQNINNADAQ QQTMLDNVQILAAEDNEINLYIAVSLLTEAGAAVTTAQNGREAVERFSEAPEGFFDLILM DIQMPVMDGYSATRAIRALPRADAQDIIIIAMTANSFREDVQKCLDSGMNAHIAKPFVMN DITKAYADSLAEREKRTGQSERP >gi|224461045|gb|GG657759.1| GENE 1712 1778045 - 1780102 1599 685 aa, chain - ## HITS:1 COG:BH0026_2 KEGG:ns NR:ns ## COG: BH0026_2 COG0737 # Protein_GI_number: 15612589 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Bacillus halodurans # 417 683 231 471 471 119 33.0 2e-26 MTDLFDPVSQTDLSIFKGRAAADRQSGRCGAQKERESDMKRSVSRGIACILSAAMILGAA SGCSRQENREKTVIKILYSNNFKEVEDLVESTYDDIDLQVEISPYSSEQIRRLEKGVGPD LVFTPQPDSTMVQEYLLDLSDTKASEAYDGTIMNAWKQNGKTYLIPLPGVYSGYVVNETL FEQAGLSLPANNTELVSALSEMREKGIGVGEDDINFSIMSDYNTSVGMFYVGCMVPDFLG TVEGVKWLADFKNKEAAFSGVWEQSFSLSDSFVNAGVMDPAAVGRQRNSILCQERLVDGT LAAAFGDSALYYECVADNEKAVKEGTGTAYTYRMLPFFSDKGNEPWFLFAPSALMGINKN TGEEKQEACRRILELLSTQEGQDALIADLGGGTSCLRDHEQPKESIPGGVEEYVESGYIY NVLFPGKTVEYFGGCVRNIMNGKCSVEEALQAVDQYNYEGEDKLSYDFTVIGEVSHDLLL QNFNIRLGETEIGNFIADCVAGASGAPIAVVNGGGIRASFFEGVVYGGDIAAVCPFDNKI IVLEMDGETVWEMLENSVSTCSEEFPGGRFLQVSGLQYTFDSTRPAGSRIVSVTLSDGTE VDADTRCQIAVTDYMAGLRSYAEGNGDGYTMLNYYDDTVPKGSVTLIKETGLTYRDAMAL YFEQHRDTAVDAQMEGRIRDLAQDD >gi|224461045|gb|GG657759.1| GENE 1713 1780286 - 1781296 1123 336 aa, chain - ## HITS:1 COG:BH3843 KEGG:ns NR:ns ## COG: BH3843 COG0673 # Protein_GI_number: 15616405 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 1 324 1 320 334 217 38.0 2e-56 MGKMVNWGVLGCAGIARIRMIPGLLQADNARLYAVVSRGSAKAKEFQRLFGAEKAYDSYE KLLEDDQVEAVYIPLPNSMHFEWVEKAARAGKHILCEKPIAMNEEEAKRMFEICRENGVL LMEAFAYRHSPLVNKVKELIEEGAVGKVKYMESHLTDVLTDMSNIRMDRNLGGGAFYDMA CYNVSVISYLLGKEPECVKAFAEMDERHGVDVSNTFLLKYDDGTQAAGYSSLNSYARGYY AVVGEKGRIEVPCNFNCRNVSKFTVSTGAYVDNVEVLDEVKTEYIVMCPDNYMLEAEQFG RCILDGEKPLVSMEETVQNARILDRAFEDAACRAKR >gi|224461045|gb|GG657759.1| GENE 1714 1781407 - 1783149 2234 580 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 332 6 337 337 297 49.0 3e-80 MKKILNADVSNVVEEMLAGYLSAYRRYYKKIGEYNAFMYKGHRKDKVALVIGGGSGHEPL FSGYCGAGLADGVACGNICASPNPELIYETAKAVDQGKGVLFIYGCYAGDNLNFDMAEEL CRADGIQTAHVRVWDDCASAPKERITDRRGIAGDVFVIKTAGAACDAGLAFDEVVRIAEK ARDNINTIGLATSPGTLPGNDKPTFELPEDEVEFGMGLHGEPGIERTKMKPADELVDRMY EELKAEMDLKTGDEVAVLVNGLGSTPLLELNIVYYDLHRRMAADGLKVHDAEVKTYCTCM EMGGFSITILKLDEELKQFYDAPCYSPYYAKGELTGAVSAADDGEEEEEPEFDETDVDEA VIVRSKEGVLDRLNAADARNMLLYIADKIIAAKPYLTEIDSVIGDGDHGIGMAGGMQKAK KKLLQMQDATNVYALFEAAGKAMLMSMGGASGVIFGSLYLAGAKDMEPKEELTAADLAAM ERKSLLAIQERGKAEVGDKTMVDALAPAVEAMEREASGSLLDMLNAAEEAARQGMEDTKK YIARFGRAKSLMERAIGHQDAGATSVWLIFQGMREFVEGR >gi|224461045|gb|GG657759.1| GENE 1715 1783175 - 1783738 672 187 aa, chain - ## HITS:1 COG:BS_yckF KEGG:ns NR:ns ## COG: BS_yckF COG0794 # Protein_GI_number: 16077414 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Bacillus subtilis # 1 187 1 185 185 96 29.0 3e-20 MEYKEMYERILSEYRQVFEKLDEAGMRAFIEEVKKHGRIFLIGVGREGMATRAFAMRLMH MGKEIHWIWDDTTPSIGEGDLLIATLGDGCIGHINYICERAKEAGAFIYVVTGSPSGRTA QHVADKVFFVPAAVYRGTDDVVASFQPMGNLFEQCLLILFDMIVMTIVDETPGLTFEKMS GRHRNVE >gi|224461045|gb|GG657759.1| GENE 1716 1783752 - 1784636 1093 294 aa, chain - ## HITS:1 COG:no KEGG:Rru_A1362 NR:ns ## KEGG: Rru_A1362 # Name: not_defined # Def: xylose isomerase-like TIM barrel # Organism: R.rubrum # Pathway: not_defined # 1 289 1 290 297 281 48.0 2e-74 MKLGLNLSFAVKRFMDPEKLALMCKNDFGTDHVQFTWDLIDPWWPEELRDVLALRYRDAF AKAGVHIDATFGGLASYSYGHFLAPSKEQREAAFLFFKRAIDLTAVMGAKVMGTPVGGMS YDDALDPARREALYEEMLDYVRRLASYGKEKGIEEIHIEATPLITEFPHSPEASVRMMKD LEGTDIPVRLLVDWGHALFRPLLKEEADIELWFHTCAPYIGSIHLQQTDGQWDRHWDFTK EGIVTPELIKRATADAGLDDVMQYLEVVTIFEEEDDAVYDGMKKTMDYLHRELG >gi|224461045|gb|GG657759.1| GENE 1717 1784692 - 1785693 1339 333 aa, chain - ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 28 313 28 314 322 175 39.0 1e-43 MNKEKTKTNNVFVNALKKSNMTAIGVVLLLMIIIASVASPYFLDIYNLQSLIRDLAFIGM IGIAQSLLLLIGELDLSVGKIASLCGILAGMMMVNYGFNPWLSLALALLLGLVFGCINGL IITKLRLNSMVATIGMQGVYGGINLVLTKGKAITGIPGDIYILGKGNLGPVPFPFVFCVA VLILIIFMVKKTKTGRYIYAIGNSREAAKILGIKVDKIRVMIYSIVGLISSLAGILYVAR LGSSQSAIGENWPMNSIAASVIGGVSLTGGIGNPAGALIGAAIISIIQNMIVLFGVNVYW QSAVSGIVVVIAISFSSISEIMRERKQRKIKLG >gi|224461045|gb|GG657759.1| GENE 1718 1785714 - 1787195 1607 493 aa, chain - ## HITS:1 COG:AGc5112 KEGG:ns NR:ns ## COG: AGc5112 COG1129 # Protein_GI_number: 15890066 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 485 25 510 521 355 39.0 9e-98 MKVLEAQNITKLFPGVVALDSVDVSFEPGEIHCVIGENGAGKSTLIKCLTGVYEPEEGQV LIGGEDALKNKVLFDKVAYVPQEIDLFGYMSVAENLFLPYERSGLKGIVNQKELEKKAVP LLEKFRIPVKPDDLVKDISVSAQQLLQIARAAVHEDYEVLMLDEPTTSLTTSDTQILFDI VKEIKAENKAIIFISHKLEEIFALGDVLTVFRNGKKVAYSKLEEIDIPWVIRQMTGRELD QEQVFYSDKVTDEVLLEVNKLTGERFTDVSFTLKKGEILGFSGLVGAGRSELMQAIFGYL PVYSGSVKLDGEDWKLGDTNYSVNHGFIYLPEERKKQGILPVLSIRENISVSALEDLKSG FSISKRKEDELAGRIIDTYDVKTPDAEKEIQFLSGGNQQKVIIGRSMCCSPKVLVFDEPT KGIDVGTKAEIYRLMKELAEDKGIGIILISSEMEEIKKCSNRIIALYEGKKAGEYDAEAD KEAILSAIIGVNS >gi|224461045|gb|GG657759.1| GENE 1719 1787280 - 1788266 1283 328 aa, chain - ## HITS:1 COG:TM0114 KEGG:ns NR:ns ## COG: TM0114 COG1879 # Protein_GI_number: 15642889 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Thermotoga maritima # 41 328 32 328 335 128 31.0 2e-29 MKKKVLSVLLAAVMVTAMLVGCNSGESKKDAGGEAKKGEDLTFVVVPKCVHAWFDEVNKG AQLQADALSDQLGVEVKIDYRAPSKSDVAEQNSVMEQAAATKPDGIAVDPVDYEGSKAVI EEIQSQGIPVVLFDAPSPEGSGLTSVGNDFKEQATIAADKLAELIGEKGKVAVMQGFPSA PNHAERYQAHLDALKKYPNIEVIDGGIDNDNVEEAQSQAAAVLAANPDLKGYLNCDACGS GVAAAIEEAGKAGDVTFVAMDNLIEILDYVKSGTISATSSTIPQMQGSMAVLMMWQQSIG IEIPQKVDTGIAYIDETNIDEWIKTVSE >gi|224461045|gb|GG657759.1| GENE 1720 1788395 - 1789783 1556 462 aa, chain - ## HITS:1 COG:SMc02325 KEGG:ns NR:ns ## COG: SMc02325 COG1129 # Protein_GI_number: 15964384 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 4 461 13 468 503 90 21.0 5e-18 MNYTYAGNRRLENISMCILEGESVGFLGLTYSGKDLLVRLLSKEAEADIQDFNIYVDGVK MSDQEELAGKVYRIAASNYTIDDWTVAEYIGLVDSGWFQMLWKRRLLEEETDAYFKELGI PFDVSRKLKDLTELEKRIADMVKARRHGVRIVIVEDEFEGMRPESIGEFARVMKQLAKGS LAVIVNSHSDMVLSILSDKYIIMKKGRIVKKCRKDYIQDGAHLEKFLLGSTIKSKKKHMD SYTLEQSEEKKTVYRVRGLKLKDGRKGDFNFSRGEVVTFLVLDSKEKERLFLLLSGRQAG RDTYCIVDSQEYASGDFSGFVHGKVVSVMHMGSKEEVFTRMSAGQNLLLPSLGKISSVEY IASSGRISKMLKQNMDSDAVLPDMEAGSLEVNDLISVTCERWYIYNPKVLVLFEPFAQCD VYGVSIVKSYIKKFANRGTAVIILKSREEYVEDISDKIISLD >gi|224461045|gb|GG657759.1| GENE 1721 1789788 - 1790738 1001 316 aa, chain - ## HITS:1 COG:BH2110 KEGG:ns NR:ns ## COG: BH2110 COG2972 # Protein_GI_number: 15614673 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 46 299 336 578 585 148 34.0 1e-35 MIPAVILIQTGMLVYLAAAVYIPVKNFAETLDGFTQKDGTTDENVEEELRQAAGRVPYMG QIERLADRYANQRTRKSSAKIFDKQTELTELQSQINPHFLYNTLESIRGQALMDDNIEIA RMVEALAAFFRYSISGKGNLVTLRDEFANINNYMLIQRYRFNNRFSMEIIIDEEDEAAYD FLIPRLIIQPVVENAIFHGLEEKLEGGKVIIEVIVTESNLIVTISDNGKGIESGELKELN ARIKSQDMQLYDGGSRQRNTGIALPNIHKRIQLLFGEEYGVNVYSTVGQGTDVEITVPAG YERGGGLEDEERNTAD >gi|224461045|gb|GG657759.1| GENE 1722 1790847 - 1792451 1823 534 aa, chain - ## HITS:1 COG:BH2109 KEGG:ns NR:ns ## COG: BH2109 COG4753 # Protein_GI_number: 15614672 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 6 530 2 520 525 174 26.0 5e-43 MQNRKWRVLIVDDEFRIGMLIRKLIKWDEYDMEFVDAVDNGETAFQIIKEKRPDIVITDI RMPKLSGLDLICMTREISRDIKFVVISGYKEFEYAHRALQYGVDDYLLKPISEDELNKVL KKIHKEFLQKEHQIKERQELQEKVTQSRQIIKRDFLKNIIEQEDADEVEDARVALEGEVY RGIDIKLDYVDYSKSDRKQDRLTVERIVTIVEGILKEVSEEVLICEKENLHIYCLFNYDY SRAKLIKNSINDILSEIKEYLIGFEQYEVTIGVGTERTDFAGIRFSIREANRAVGNRIKM GTGRLIYAEAAARGVDNTDENPVERYRESFLASLEVYSRENMEQCLNQIFSSFMLRDDID FSGCYTAAEELIDLFFGYMDLHQEESRQLRKRLGGSCQHCYSITQLKNLLKTELGSYLDM NRAAAEDESVKPVRQAKQYIDEHYNEKIVLEDIAEVIGLNPVYFSVLFKKEAGMNFSAYL MNVRMEKAKEMLCSSNETIAAIGERVGYKDSRYFSQTFAKVVGVKPALYRKLHS >gi|224461045|gb|GG657759.1| GENE 1723 1792614 - 1793381 647 255 aa, chain - ## HITS:1 COG:mll8441 KEGG:ns NR:ns ## COG: mll8441 COG4126 # Protein_GI_number: 13476966 # Func_class: E Amino acid transport and metabolism # Function: Hydantoin racemase # Organism: Mesorhizobium loti # 33 237 32 230 250 116 33.0 5e-26 MGKKRILFLKAVAYSDLNPTIRSYLCQYKDNNTELEVRSLDTGPKHLEYQYYQAIAGNGI LKEVLRAEKDGFDAVIISCFDDPFLYPAREISRNIVVTAPGEASMHLAAVLGNQFSVIVG RDKWIPQMKENVHRYGLLSKLASFRSLGMGVLEFHENEEETVRRMKREIRAAIETDRAEV IILGCSMQFGFYEELQKEFHVPVIDSMVAGLKHTEYLLEMKEKAGWSFSRRGLYERPPED EMKEWKIEPYGLGTP >gi|224461045|gb|GG657759.1| GENE 1724 1793402 - 1794469 1202 355 aa, chain - ## HITS:1 COG:PH1046 KEGG:ns NR:ns ## COG: PH1046 COG2309 # Protein_GI_number: 14590883 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 17 339 7 335 350 213 38.0 5e-55 MEWNLGVEMRGEYRRMELARAAMKLVRDIMLCKPGENLVITYDTCIDERVVHALTEAAYT IETVPTVIYYPTAEGFYADPPQPVADAIAAADVWIELTYASIMHGPAYRRAVDENGARYI CATGLDTEMLVNCIGKVNIDKVIELGEYFKYRLEKAQDIHLLSKEGMDLRGSMGGRKVRH SGIKASEKGYPVMLTGQTSWCPVEESIEGRLVFDGAVFPPDTLGVLRDKICIDFKEGRVV DVTGGAEAEIYKNWLYSFDDPNMLRLAHYSQGFNPGVRKVTGRIVEDERVFGCMEFGIGS QGVKIGGAHWSAASHSDGTVLRPTIILDGEKLEEDGVFVDETARKICAELGVARY >gi|224461045|gb|GG657759.1| GENE 1725 1794481 - 1795287 799 268 aa, chain - ## HITS:1 COG:SPCC965.09 KEGG:ns NR:ns ## COG: SPCC965.09 COG0388 # Protein_GI_number: 19076019 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Schizosaccharomyces pombe # 16 252 21 268 272 101 28.0 1e-21 MLKMGLVQLAVTEGEIEKNCAHVRELALTYAKREVDLLCFPELSISGYDFHRAEGSGEEK EFYSALAKECNTAILAGVCVKEGDAYYDAACMWDEYGTLLGEYKKIHLWDKEREFFTHGD ELVLVPYRGFQIGMLICADMRFFEISTPLSNMGADVLVYPSAWADGWKDLFHLCARMRAA ENQIYTAALNRASGDVRYCGGTSVMGPEGNLLCSLEDDREGYVEVILSKQEIKDARARLE WDSLKLPHIYKKYETYQYADDNLEHYKK >gi|224461045|gb|GG657759.1| GENE 1726 1795316 - 1796725 1351 469 aa, chain - ## HITS:1 COG:BS_ytjP KEGG:ns NR:ns ## COG: BS_ytjP COG0624 # Protein_GI_number: 16080050 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus subtilis # 13 465 11 461 463 323 40.0 3e-88 MDHILNDLIEQYKEEIIKTTQRLIAHPSLYEEGREGAPFGEPIEAALEEVLSVAEELGFE TRNHEGYAGTVKWGQKGKQIGILTHIDVVPPGDGWTYRPFEGTLDNGRLYGRGSLDDKGP MAAALFAMKAVKESGLPVKNHVCHIIGTDEESGFMRGLKYYLKKEEAPWGGFSPDGEFPV IHAEKGILRFYVSDTWEETKHAGGMYLKEIRGGTKVNVVPGYAYAAVDGTEDAEHMLQEA RDGFAKKDNISISKQDTGWKIEAKGLGGHSSQPWNGENAIQTLLEFLHRLPLEEGGGARF AGKIEELFGDGYRGERLGIACEDKLSGILTLSLGVLELGEGSGKATVEIRYPIHASEEVI LKTLKVACGQQKVELDIYQDKKHIYMPVKAPLIQTLLHVYRESTGREEEPVVIGGGTYCR AAENFAAYGPVFPGQRELAHEPDEYISVEDLILSAKIYAQALYVLLNIS >gi|224461045|gb|GG657759.1| GENE 1727 1796747 - 1797793 967 348 aa, chain - ## HITS:1 COG:PH1046 KEGG:ns NR:ns ## COG: PH1046 COG2309 # Protein_GI_number: 14590883 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 6 335 4 335 350 325 45.0 6e-89 MSDFLYEFEIGKAAEVIVKELFKVKPGESFVITADTKSDERVVNATARAVYAAGAKPMVI WTATPPGPGKQVDGFLPSAAIKAALLEADCWIEYNAMYFLYSSTYEEVAHTNKKLRFLCL PGMYVDVFIRLFANTDHGALRDLLHAVRDKIRAAKHVRLTSTAGEDISFDNHPDHPINAR DGYADEPGTHMLAGMISWTPDLDTVNGVIAIDGSLVPQFGVLKEPVKIYMKDGVIDHVEG GSSARQWEKYMRDFQHPQMLRPAHVCVGFHPNAKLTGQLGEDERIFGGSQWGFGAIGSFL VPPDGVPAPSHIDATCLSVSIYLDGTAITKDGKIVDEDLKEYAARLGR >gi|224461045|gb|GG657759.1| GENE 1728 1797798 - 1798847 1047 349 aa, chain - ## HITS:1 COG:PH1046 KEGG:ns NR:ns ## COG: PH1046 COG2309 # Protein_GI_number: 14590883 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 5 342 7 347 350 277 40.0 2e-74 MIGRELQFAAEVLINDLLKTQKGEIVAITGDTASDMSVIETVGRAAAMAGAKPLIALIPT PSGVSLAADKDIQVEGLSGLLAHADIWIELNVKWLLYSTPFYRAKKANPSLRHMCLTGTT ADTLIRCVGNVNYPAMRRFTVILRDKIAGAKQVRMVSQMGDVLSFENVQERPISCKLGDA SVPGTHLFMGQIGWTPDIESVNGVICLDGSVAPDIGIITTPVKIRVEHGCIQSIDGGEEA KKYEAWLKGFAHPQMLRVSHAGIGFHPGAGVIGDILLDQRVWGSTTWGFGSIGAGMLPPE GVYAPSHSDAVSLNTDIYLDEKPLWLHGTLIDEELKELAGRLTCTQGKV >gi|224461045|gb|GG657759.1| GENE 1729 1798844 - 1799842 964 332 aa, chain - ## HITS:1 COG:BS_appF KEGG:ns NR:ns ## COG: BS_appF COG4608 # Protein_GI_number: 16078202 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Bacillus subtilis # 3 319 7 329 329 317 48.0 2e-86 MPEKILEIKDLKKYFPLGNGQTVKAVDGVSMDLYKGETLGLVGESGCGKSTIAYTVVGMY GATDGEVCYKGTDLVKKGYKRTLRQKGEIQIVFQDPGSSLNARRTIEKSMQVPLDIHDKM SKEKKQARIESLLEEVGLPKEYKNKMPRNIGGGERQLVSVARALATNPELIILDEPTSAL DVSVQAKVINTLIELQKELELSYLFITHDLSLMRNVATRVAILYLGRLCELAPTKEFFDA PLHPYTQMLLSSIPVATEEEEAMKPEQITSQGEIPSPVNAPSGCTFHTRCRDCMDICKVE APTMTEIGPEHFVCCHKFAKHGLEEQKEAQEE >gi|224461045|gb|GG657759.1| GENE 1730 1799842 - 1800828 503 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 326 14 329 329 198 33 1e-48 MEEKTNVLEVRDLSVSYTVANVKTHVLEGVSFDVEKGKSVGIVGESGCGKTTTLRTILNV LPSNGTIESGEILYEGENILEMPKARLQEYRQKGAGMIFQDPSSALNPVISIKNQFLEAL KYAHKDKKLTKTELLEKAAKSLETVSLADPDRILNSYPFQLSGGMRQRVCIAMTMAAQRQ LLLADEPGTALDVTIQDQILRLIKSLVESGELSVVMVTHSLGVIRQVTTSVNIMYAGTIV EGGETKQVFENPQHPYTQALMDCLPKLTGSGIAKGIPGRIPDYSNPPKGCRFAPRCPYAD EKCRNEKPVRHEISAEHWVACFQAEEGK >gi|224461045|gb|GG657759.1| GENE 1731 1800829 - 1801692 1173 287 aa, chain - ## HITS:1 COG:mll9134 KEGG:ns NR:ns ## COG: mll9134 COG1173 # Protein_GI_number: 13488081 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mesorhizobium loti # 11 285 20 293 296 277 49.0 2e-74 MKAERKETWIQNWYKFAAGKVSVLGLAIVLLIVLLAIFAPVIAPYPEDAGPVVKFEESSQ PPSAQHLMGTDTMGRDVFSRLLISLRSSLLMGVLVLAIAVPVGFVVGVLAGYFKDTWIET ILMRIVDIFLSVPALVLALAIAAILEPNLKNSMVAITIMWWPWYARLSFGVASSLRTENY IVYAELTGAKLSHIVLKEFLPNTFDQILTKMTLDMGYVICMGATLSFVGLGEQPPTPALG NMINDGVKFLPDMWWLAVFPAVAIIVIVLGFNLLGDGVGNIFNVEGK >gi|224461045|gb|GG657759.1| GENE 1732 1801705 - 1802727 262 340 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 67 336 43 314 320 105 26 1e-20 MSLLKSILKRLLSSLVVLLGLTIIIFVLMRIVPGDPARLALGANVSEDVLENYREVNHLN ESLPAQYGYWLTGALRGDFGTSAVTKRAVIQDIKDFAPATIELVLWAGFPSILVALYLGV TSAQHKNKWQDYVCRFSGYIFVATPTFVFAVMFVLIFGYWIPVMPTIGGRLSPSFTIPDI TGLYVLDALLGGKPAAAWDAFLHLLFPALALALGKTMQEARITRSSMLQNADKDYITMVT SQGVPQSVVNRRFLLKPSVIPTITVIGMDIAAMFGNAFLVERIFNWPGLSSYGMTAILNK DTNAVCAVVLIIGLAFALTSIAVDIVAMILDPRMRQKRTR >gi|224461045|gb|GG657759.1| GENE 1733 1802763 - 1804418 2022 551 aa, chain - ## HITS:1 COG:AGl3525 KEGG:ns NR:ns ## COG: AGl3525 COG0747 # Protein_GI_number: 15891884 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 41 500 36 492 537 245 32.0 1e-64 MKKMISSLLCVVMAAALFAGCGKASSDEEKSGDTPSVGDTANDGDNIVRYTLTSTPQIDP GVGSDLGAATVLINLYDPLVQPQKDGSTAPWIATEWETSEDGKTWTFKLRDDVKFHSGNP LTAADVVYSMQRNLDMGEGFGYLFSSVVEEAKALDDTTVQFVCNKPTGTLLATLVRLYIL DSKLVEENYAKGDYGDKGDYGKAFLLENDAGSGPYKVKKYAANSHVLCEKNTDYWAGLDE NTPEEFKAIGSNEAVTVKTMLERKELELSDEYQTSETIDALGKVDGISIMENTQGDIIYL LLNNQKAPTDDEHVRKALAYMLDYDAVCKDVYPNSVKAESIISKNVLGFKKMSEYSFNIE KAKEEIQKSKYADNIQDYPIEVCWVAETPDREKLALLIQSAAQQIGVNVKVVKTPWSSVV ENSSSPESTPNVTTTWFSADYPEAGSVFESALHSKTSGTWKNCCWIEDATLDGMIDDAMT TVDQEERVAKYEGIQDYLADKCVMIPIAEVTLRFAYRSDYVDYDAADPANLVPVMGYINY MPNIKVYPDKK >gi|224461045|gb|GG657759.1| GENE 1734 1804610 - 1805518 704 302 aa, chain + ## HITS:1 COG:PA5437 KEGG:ns NR:ns ## COG: PA5437 COG0583 # Protein_GI_number: 15600630 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 5 293 7 292 311 103 24.0 6e-22 MLDTRLVTFLTLCQTKSFTKTAEKLHITQPAVSHHIKYLEGYYHTKLYTYTNRRFVLTPT GRTLYQFVNSVHSDSERIREHLSLLTSPTKELRLGAEQSAGESFLPYLIIAFMGKYPDYK IRVVTDNYDALSRMLNEGELDFFLMDGIVSKSEHDYYELCSSSTICACSPDHPLAEKTVS IQELYNSTLILGVDKTPSRNRLEQIFRDNNISSIHFAHRIEISNSLTTVKQLLIQNIGIS FLYKSAVARELKEGSIRQIYIRDYYEYHSYNLISIHNSYFYPEQTDFIKFCQDFLKQWDS DI >gi|224461045|gb|GG657759.1| GENE 1735 1805472 - 1806167 542 231 aa, chain - ## HITS:1 COG:MA1860 KEGG:ns NR:ns ## COG: MA1860 COG0655 # Protein_GI_number: 20090710 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Methanosarcina acetivorans str.C2A # 1 216 1 214 222 185 41.0 6e-47 MKFYVLNGSPRKNHNTAKILECAVEGIKSVLPDAQINWIHVYDHSYSGCVSCYGCKRVNG RSYGKCAKRDSISRLLENISEGDGLLIGSPVFFHGIPGQLRAFLERLLYPYLVYGKEYTS IAPKRFPAAFFYTMNATEEKMKQMNYPIKLSAMEEYTGIVFSKPEIFHCFDTCQFDDYAL YKAERFSQEEKLKVKKEQFPKDCQRAAELGKKIAQKAICQNPTASESPGRI >gi|224461045|gb|GG657759.1| GENE 1736 1806352 - 1808115 1904 587 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 331 6 337 337 311 51.0 2e-84 MRKIINDADNVVSEMMEGFTGAYSRYFRKHPEVNAILSRQKREDKVALVIGGGSGHEPMF GGFVGKGLADAAACGNIFASPDPNTIYEAAKAVDSGKGVLFVYGCYAGDNLNFDMGEEFL RDDGIRTAHVRVRDDVASAPKERMEDRRGIAGDVFVVKTAGAACDAGLSLEEVVRVTEKA RDHTRTVGVATAPAQLPGVDKPIFELGEDEIEYGMGLHGERGVLRTAWQPADVLAEKMYA QIKDDTDLREGDEVCVLVNGLGSTTITELAIVYRKIKKLLDQDGIRVYDADLNNYCTSQE MGGFSVTFFQLDEELKGYYDSPCWCPYYAKGELTERACAAGEEDRCTEEAEQGDETRKDP GKDAPAAAEPERERKGALEELSAEDARRMLVYIADKIIEKKPYLTEIDSAIGDGDHGIGM AGGMKKAKEALEKMTGEKNVYAVFEAAGKAMLMSMGGASGVIFGSLYLAGAKGMEPKPVI TAEDLARMEEKSLRAIQERGKAEVGDKTMVDALSPAADAMKASCGQGLLPMLKAAEAAAA QGVEDTKKYVAKFGRAKSLMERAVGYQDAGATSVWLILQGMREYVEG >gi|224461045|gb|GG657759.1| GENE 1737 1808130 - 1809173 1493 347 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 8 346 6 344 347 276 43.0 4e-74 MEGKMKVAVMTGARQMEWTEKDIPKPGKGELLVKLEYVGVCGSDLHFYEAGRLGNWVPDG PLVLGHEPGGVVEEVGPEVTGFKKGDRIAIEPGVPCGTCDMCRKGLYNLCPDMSFMAIPN ERDGVFSEYCVHPANMCFKLPDNVDTMEGALIEPLAVGFHAAKVAEAEIGQSAVVLGCGC IGLVTIMVLKARGIEEIYAVDMIGKRLEKAKEVGAKEAFNAKDVNIEEFVRTLPGGGVDL VFETAGAEFTTRQSAKLIKNGGRVVLVGMCAEPEIVVDIGSLSAKEGDLKTIFRYRNLYP AAIKAVSEGTIPLKSIVSHIFEFKDVIEGVAYNVDNKSDVIKAVVKY >gi|224461045|gb|GG657759.1| GENE 1738 1809340 - 1810332 1497 330 aa, chain - ## HITS:1 COG:BMEI0393 KEGG:ns NR:ns ## COG: BMEI0393 COG1879 # Protein_GI_number: 17986676 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Brucella melitensis # 41 294 18 273 325 184 43.0 2e-46 MKKRMLSILLVAAMAAALLLGCSSGTEGSDSKGDDKKASKKDGGYTIGCTVYYMTEFVTL MTEGMEKKAEELGCDLVMLDAQQDAQNQITQIENLIAQKVDVIIVAAVDSDAILPAIEMC DDAGIPLVGVNMLFNTEEPYHYVGPDDVLAGELEMQNAIDEIGGEGNVVILEGPIGQSAQ IQRLEGNQNILDKYEGKINVLADQTANWSREEALTLVENWLETFSGKIDAIVAHNDEMAL GAIQALEAAGLTDKIVVTGVDAILDGCNAVKDGTLLGTVYQDAGLEGSEAVQKAYDVLEG KVTEKELSYIDMKWITKDNVDELLDTIYAE >gi|224461045|gb|GG657759.1| GENE 1739 1810350 - 1811297 1300 315 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 6 315 21 330 330 252 49.0 6e-67 MKEMTKKFDRNWIQTYMLIFIVIGLGIILSFISGNFLTGTNLLNVLRQISINGILAIGMT IVCLTGGIDLSVGSIVAFSGIIAAGLLRDKEYPIALIVLIAIAIGGLLGLYNGYFVAYWN AAPFVVTLSMMTIARGMTYVYSTGRPISNLPTEFLAIGKGSIAGVPVPTIILIIVFILAS VMLTKLKFGRYVYAVGGNENAAMVSGINVKRIKMMVYVLSGIACGIAAIILTARVSAGLP TAGESYELDAIAATVIGGTSLSGGRGRLWGTIVGAILLGIVNNGLDLMNVSSFYQQIVKG LIILGAILIDSKRNQ >gi|224461045|gb|GG657759.1| GENE 1740 1811297 - 1812823 1819 508 aa, chain - ## HITS:1 COG:BH2322 KEGG:ns NR:ns ## COG: BH2322 COG1129 # Protein_GI_number: 15614885 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Bacillus halodurans # 11 500 5 495 522 496 52.0 1e-140 MKNEERAQDGLVLEAKNITKRFPGVLALSNVNFRLIKGRVHALMGENGAGKSTLMKIIAG IYQADEGDIYLHGEKVSFHTPKHALSHGISMIHQELSPILDMTIAENLFLGKEFCKGKLI DYKTMNREAAVLLEKVGVDLPPGKLMKELTVSQMQMVEIAKALSYDAEVIIMDEPSATIT DREVAGLFRIIKGLKEEGRCIVYITHKMDEVFKIADEITVFRDGQYIGTYDAGEIDENEL VVKMVDRELTEIYPARSNEAGDVVLKVENLSQEGVFEDISFELRKGEILGFSGLMGSGRT EVMNALFGITQPTSGTIWVNGEKMDKPRPGKAISKGIGYVTEDRKGNGLVLEMSVYDNIV LPSLGKLSGRIGAINRRKAARVAEEYKEKLDIKTPNMQQMVKQLSGGNQQKIVLAKWLLQ DPDILIFDEPTRGIDVGAKTEIYKLVASLAKEGKAIIFISSEMPEILGMSDRVVVFYEGR KKGELAREEATQEKIMMYASDVDEGGMQ >gi|224461045|gb|GG657759.1| GENE 1741 1813116 - 1814564 1607 482 aa, chain - ## HITS:1 COG:BH2322 KEGG:ns NR:ns ## COG: BH2322 COG1129 # Protein_GI_number: 15614885 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Bacillus halodurans # 17 474 22 485 522 122 24.0 1e-27 MKKERLRIENIRKGTLLKRIELQVFEGEIIHCVFDNIQEKTMFLELMTGARKADYGRVYY EEEKVPEKDMSSVLRKRVALISRESRLIDSVSMEENMFLVRPRVKGHWVNRRSYRKEAAE LFREFGLCIDVEKPMGRRTVFEKVQIEIMKAYLLGQKIIILTALSICLSDAEMKALWCLL EKLRRKGLSCLVIEPLEDINFVYTDTVVVVKHGKTCAVKDVDECDYTTLHTILYRDELEK NAEDWKRGPKERAGEGISIQDVTTSYLRNVSFSVAKGEIVKLFCIDERSYNEVTGFLRGE TEAVSGRLCIGGCEKAVGKMMTGMRDRIGVVQGNPGTASLFQELSAMDNLQILLSQKVSG MWMIPKYRKSIRKLLGGIISDDVYSKKVKELSPADVQRIVYCRWLIYSPQLLVCIQPFAE GDIQARETAREMIYMLEKRNIPVLIITSNTAELNYCRGRELYMRHGRMIGKEEAYEFLYS EL >gi|224461045|gb|GG657759.1| GENE 1742 1814539 - 1815579 1193 346 aa, chain - ## HITS:1 COG:BH2727 KEGG:ns NR:ns ## COG: BH2727 COG2972 # Protein_GI_number: 15615290 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 98 343 362 595 597 138 33.0 2e-32 MKRKALSARTAAVIAILLLSGVVNIGILSIIFSEGTVSAGFMCAVLLAEVTVLLVSVYLA AEYLLKPYQEMRRLYQRFIDGQVYEELFDAEYELMPQWNDVMKKVRHLLNKQDAIKMSKK QAEYLALQNQINPHFLYNTLEAIRGDAICAGLDSVAETTEALSIFFRYSITGVDKLVTLE EEIDNVENYFTIQHYRFGEKLKLQITYPKEEEVLQLRLPKLTIQPFVENAIYHGLEKKVN GGVVRVKIDTTEQKLMITVSDNGVGMPEEQVEKINGYFEKVAVSYVGEDRKKKGGIAMKN VNSRIKLLFGEDYGVHVYSVAGIGTDVKIMLPRLRRDEYEERTAEN >gi|224461045|gb|GG657759.1| GENE 1743 1815593 - 1817203 1786 536 aa, chain - ## HITS:1 COG:BH3842 KEGG:ns NR:ns ## COG: BH3842 COG4753 # Protein_GI_number: 15616404 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 1 536 1 518 530 140 23.0 5e-33 MLKVLIADDEKKVCQLIVNLVEWKSFGFEIVGVVNDGISAYKFLQDNTVNVMITDIRMPG CDGMELIQKAKVLYPDMYIVIISGYSQFDYAQNAIRFGVEDYLLKPIRKKDLTATLEKII EKCREEILDAQKWEDMQKRLEENEERLKGSFLEDLLKRPEKFGGFYSLERINGEYHYHFE DVCYQTFIIKAIPGKRKEDSDTRRILLQKGTEIVKCALDGLCNEAVTGVVDGDIYGILNG TEEEMHRITRKLKKVKLDILRLQDVFEEVQVYIGLGRETGSIREILESFETAGQSIQQRF YYGEDFLLKAPQGEDYREKAGRIVDNGFKKRFLNYIEIIDLDGIGGEMDDLERKLSESPA KDGRLVASVYKEVLTLFYFGTHNYNIEIPDQYPELLKHLEVLGTIHEAAGYLKRYMVHSL MHWIEEKKYVESRPIRLARQFIGENYYLPLTLETVSREIGFNPTYFSGMFKKETGKNFSD YLKEIRIENAKNMLLNTEQQVEDISFAVGYSDIKYFSRLFKKQTGVTPTEFRRLYN >gi|224461045|gb|GG657759.1| GENE 1744 1817432 - 1817872 552 146 aa, chain - ## HITS:1 COG:lin0363 KEGG:ns NR:ns ## COG: lin0363 COG0698 # Protein_GI_number: 16799440 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Listeria innocua # 1 143 1 144 148 127 53.0 6e-30 MKIAIGCDPNAQEAKEELIKFMEEKGYGEITDFGSEDPIYANTAVKVAEAVASKEYDRGI LICGTGIGVSIAANKVKGAYAALLSDVYSAKRARLSNDANIACMGAFTIGNKLREELTDA FLTNDFVPGCSSQPKVDAFVEYDNAR >gi|224461045|gb|GG657759.1| GENE 1745 1818028 - 1819458 1061 476 aa, chain - ## HITS:1 COG:PM1368 KEGG:ns NR:ns ## COG: PM1368 COG2195 # Protein_GI_number: 15603233 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Pasteurella multocida # 7 470 28 494 500 211 30.0 2e-54 MVEEVIRQFRALALIPRATFHEQRAAEYIEKLGIKYGCKTVRDSKNNVVIDKPAHAGYEH VPRVILQAHIDMVCKGTPGRGYDPLKDGIQLVEEEGRITAEGTTLGADNGIGAALILEIL RGEEACGPVRGIFTVEEEEGMGGARSLDPSFVQDKYFIGLDWTSTRTSCIGCASSLSLLA RKEAVYKRPEYDSAYRICLKGLPGGHSGLDIHRVKTNAVREMIKILQNILLLGIDFELAH IAGGTAKNVIPDSCTGTVCIKSDCINKFLETLSSVKKQMFAFMEAEGEDVVLTVEKAEKP DRVLERQCAKEILDFVQSIPNGVVKTEPGSSGYIHLSSNIGTISTGTCVELSIMARGSRK EYLDLLYTGIKQQAARCRLDVKCVSKEPGFDSKRDGKLIRRVCEIYRAQNNEELTLEKIH AGLECGYFKQKNPDMEVIVLGADLENIHTTKETLYTERLGVLCRLLLEVLRTAGSQ >gi|224461045|gb|GG657759.1| GENE 1746 1819462 - 1820496 990 344 aa, chain - ## HITS:1 COG:PH1046 KEGG:ns NR:ns ## COG: PH1046 COG2309 # Protein_GI_number: 14590883 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 4 341 7 347 350 259 36.0 7e-69 MQNELIQIAQKLLRDLYRMKQGELLVITADTLTDREVVEATEEAAGRLGIQWATLWIKAP GGVAVAADKEIPGKAVVSLLLKADAWAEYNKMWIYGSGAYSEIMKKNTSLRHMCLTGATG ELLAHCIGNIRYDALQAFGLKLAEKIQNARCMRMTTEKGMDISFENIQGRPVLKELGDAG NPGTNMLPGQIAWTPLIESVNGTLVFDGALAPVCGVPSEPVRIKVVDGSVKEVAGGKEAE AYLKWLKSFEHSQMFGISHTGIGINPGALLSGDILQDQRVWGSVTWAFGSIGGNLVPPDG VPGPSHSDCVALGATLIIDGRELFHNGEVTDEEFKELARALTGR >gi|224461045|gb|GG657759.1| GENE 1747 1820525 - 1821520 1063 331 aa, chain - ## HITS:1 COG:BS_appF KEGG:ns NR:ns ## COG: BS_appF COG4608 # Protein_GI_number: 16078202 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Bacillus subtilis # 4 320 6 328 329 303 46.0 3e-82 MEEKKKTIEVKNLKKYFPLKNGKVVRAVDGVDLEIYEGETLGLVGESGSGKSTIAYMVVG MYKATDGSIIYRGEDLTARGMKRTKEQKGNIQIVFQDPSSALNPRRKVKKSIEFTLKLHG GIEGKELEEKAEDLLEMVGLPREFGENYPRSIGGGERQLASVARAMAADPSLLILDEPTS ALDVSVQAKVIRKLIELQKERNLSYLFITHDLSLMRNIADRVAILYLGKVCELAPAADFF EKPLHPYTQMLLSSIPVATDEEEMMRPEKVISKGEIPSPVNVPPGCAFHMRCPVKMDICS KELPEMMEVSGGHYVCCHKYCQAERADTAQN >gi|224461045|gb|GG657759.1| GENE 1748 1821527 - 1822501 508 324 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 4 324 9 329 329 200 35 3e-49 MEKKNILSVRNLKVSYKVYGGRSKVVNGICIDVPSGGRVGLVGESGCGKTTSLKAILGIL PSAGVVEDGEIRFDGKDVREMSGAEIDLFHRRGAGMIFQDPSAALNPVFTIEKQLVTGLR YSFEDKVSRKEVYDKVVQALYEVSLPDAERIMKSYPFQLSGGMRQRVCIAASLAADKKLL LADEPGTALDVTIQDQILRLMNSLVEKKGLSMVMVSHSIGVIREVTEYVYIMYAGMIVEH GRTKAVFHDPKHPYTKALMECVPKLTGDGISSGIEGRIPDYLNPPDGCRFSPRCKYATDE CRNTVPEMTEVEEGHQTACFMLRR >gi|224461045|gb|GG657759.1| GENE 1749 1822501 - 1823364 872 287 aa, chain - ## HITS:1 COG:mll9134 KEGG:ns NR:ns ## COG: mll9134 COG1173 # Protein_GI_number: 13488081 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mesorhizobium loti # 5 286 14 294 296 275 48.0 9e-74 MKESKLESVKRVWYQLSKNIPAVVGIIIVAVVILAAVFAKQIAPYPDHDGAYVNFADANI GPCAQHLFGTDNMGRDVFSRLLISLRSALLMGILVLVISVPVGFILGVVAGYMKGTFVEV IIMRVTDIFLSIPPLVLALAIASVLRPNLTNAMIAITIMWWPWYARLSYSISSSLRAENY VIYAELTGGGALHILTKEILPNCISPVLTKMTVDMGLVIMMGATLGFVGLGEQPPAPSLG NMIADGIKYIPGQWWVTIFPAVFIIIIVLGFNLIGDGVSALFTVEEA >gi|224461045|gb|GG657759.1| GENE 1750 1823379 - 1824395 288 338 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 65 334 43 314 320 115 28 1e-23 MAKTIIKRLLWSIFVLLGLSIIIFCILRIVPGDPARVALGPKASEETVAAYREEMHYNEA LPVQYGYWLKDLVSGDLGESLVTRRPVTQDLKEFLPATLELVLLAGLLQIILGQVIGVIC AAFHNRWPDILIKIIGYIGVATPAFVMAVFGLLIFGYWIPILPSIGGRLSAGFDVPVITN FMLIDTLLAGNLAAFADAAGHIILPALSLSIGCMMQEAKMTRASMIDNKGKDYIAMAVTQ GVPKRIINARFLLKPSIIPTVAIMGLDFASLFGNAFLVEQIFNWNGLSSYGINAMLQKDL NSVCAVVLVFGLVFILVNVLVDLIVAWLDPRMQQRTSA >gi|224461045|gb|GG657759.1| GENE 1751 1824422 - 1826071 1900 549 aa, chain - ## HITS:1 COG:mll9136 KEGG:ns NR:ns ## COG: mll9136 COG0747 # Protein_GI_number: 13488083 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mesorhizobium loti # 53 541 42 513 521 233 31.0 6e-61 MKKKISFLLILTMCVTMLGACSGGKNSSDKTKNSASANPDKIVRMMFTNTPYLDPAVGSD EVSTAIFPNIYDSLVVPTHDGDTEASLASDWTVSDDGLTWVFHLRDDAKFHNGEPVKASD VVFSMNRLITIGEGFAYLFQDKVKEAKALDDTQVQFTLSEPFGPFLSTLVRLYIVSEKDV MDHLKDGSYGEYKDYGKAYLNEHDAGSGPYQVTEYASGDHVSGVKFKDYFETFEEGSPEG FKFMVSPESVTVRTMMSRQEVEITDAFQPMESYAEMEKMDGIELMKFFGGSMMYLTMNNK KAPTDDIHFRKAMAYLADRANMVESIFPGSEVADGPVTRVLAGSLDEKLTYDYDIKKAEE ELKQSKYYDELDDLDYTIYWVAETPDREKLALLIQSDAAKIGLDVNVEKVPWLTLVESAA SPEQSPNSGTILTTPSYSEAGSQLVASYLTKEVGSWESMDWYSNEKADALINDAISTIDR EERLKKYEEAQKIIMEDYATVPLFELVETHAYQSSYLYWEAAERAKKGESVVPVMGYQYS LKGMHFVDK >gi|224461045|gb|GG657759.1| GENE 1752 1826215 - 1827849 875 544 aa, chain + ## HITS:1 COG:lin0472 KEGG:ns NR:ns ## COG: lin0472 COG2508 # Protein_GI_number: 16799548 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Listeria innocua # 1 542 1 524 531 139 22.0 2e-32 MEIQVSDCLAVSALKHASVAAGSKGLGRTVSAISVLETTDVDDIEPSFLTSGELLISTLT SIRYDTGKQCALLYELDKADTSGLILFYVGKILPGLDADFLRIADELAYPIITISPEGPA LFTDVIHDIANYIFQRTLNDELSLPELLIDFNASDSQYGDLGLLFNEIGRCYRGLMILLD DKYRLMCCTPNSFLTDTGLSNETLVHNIMHWYRSLYFGKHPASSIMTDQYRHDTGTIFTV NSCQIPLKDTSCRLLFVTEREDISYLFMNMLTQTIRSYILKREDSFHASREDDLLSALFT SNYEYCDYLASKLNISLEQISSMWVICPGADDNAYPDLLLSQRTKTILSYCLKAVADMIR PVHYGFYQGAWILLFDKALPSSDLSYAASLFLKELNMCFTGSPLFLYDRLSSYKKIAAAY QLIDNIRDIACKVYPYAEYYTLSHIFFLDTCQSCLNHMADSDFPSWPLVLEPLRDDESLI SILETMILDTQMDVKKSAGLLYLHRNTIYYRLKKIQSILGYDPFSAPGISNISISLALRR ILQP >gi|224461045|gb|GG657759.1| GENE 1753 1827858 - 1828901 1053 347 aa, chain - ## HITS:1 COG:PH1046 KEGG:ns NR:ns ## COG: PH1046 COG2309 # Protein_GI_number: 14590883 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 3 347 2 349 350 346 47.0 5e-95 MSRMYEIELSKAAEVLIRETCKLKEGETLVLTADTESDLRLVTEVAKAAFAVGGKPMVIW TASPLGPGQMVDGFLPSESILGALLKADAWLEFNREYFLYSKTYEEAVRGNPKLRYLALP GTTTDVFVRLYGRVDQRALRDFVELVAEKTKKAKHIRMTSELGQDIEFDNNPDWPVRGET GYWDKPGTTMLSGQIAWTPILDSINGVLVFDASLVPQIGVLTAPVKVYIEKGVIVKVDGG RAGKEWEDNLRSFNHPQMLRPAHVCYGFHPGAKISGQNGEDERVWGCTQWGFGAIGSFLA PPDGVPAPSHTDGITLNTSVWLDGVQITDKGKVIDPELNKLAEKLGK >gi|224461045|gb|GG657759.1| GENE 1754 1829486 - 1832281 1397 931 aa, chain + ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 220 710 540 999 1734 119 26.0 3e-26 MKKTRKSILASLMAVMMLFSLMPATVFATGADSASAGCITAFAEVKGITATVGTAREALA LPKSLTTTAGGPGVVTEEPVAVPVESWVCEGYDAAAAGSYIFIPALGELPFPLGEGVQPP TITVTLTEASEGAPDIITSEQQAGEARVITGFAARNGAREKQPVTATVDLTGYNSFKAAV EAQLTSLPYDEITTLTITMKTTGSVWTSDDGVYFGETFPNVTELDLGNFTGRFGAYAFLS SDVEKVRLPESVQVSYEMFSGCSSLKTLVCGPANTNPFKEEGVIDLSGAASFRDGAFSFS GVEKVRLPADVAISNGMFSHCENLATLSVAGNTGEPNVIDLTGFIKTYGDRSFSYCTSIT KVKLPSAVAISDNMFYGCENLATLSVGDNPLKTDVIDLTGFTATNGGRSFRYCTSIKMVK LPADVAISEDMFSYCKNLAALSVGDNPLKTDVINLTGFTKTYHSSAFQGCTSIKKVKLPA DVAISNNMFYGCKNLATLSVGNNPAETNVIDLTGFTQIYGSGVFQGCTSIKKVKLPADVA IYDKMFFGCDSLTTLSVGDNPGRQGVIDLSAFSATCGNSAFQGCTSIKVVKLSATITISN NIFDGCKSLTTLSVGDNPAETDVIDLSHYAKNTCGSGAFFGCTSIKKVKLPADVAISIGM FFGCDSLTTLSVGDNPAETGVIDLSDYANNTYGRSAFQNCTSIKVVKLSSAAGISDLMFY GCGSLDMLMFYGTAAPGVGINAFTGVTEGGTLYYPRGGMRYTPGTFGESDFATWRFAEAF GPEIAAQPSEQSGRVGETVTFAFGVNGAPLAFQWQWSADGINWANLADGGGYAGTATDML VIDNLQQEQNRLRFQCVASNTGGYGPDITSEAAALTVNAATTLQPPSTPYDKAAPGNPQT GDLFDPRPYLLLMLSALAGCASLLRYRRRSA >gi|224461045|gb|GG657759.1| GENE 1755 1832520 - 1833569 1346 349 aa, chain - ## HITS:1 COG:YPO3352 KEGG:ns NR:ns ## COG: YPO3352 COG1063 # Protein_GI_number: 16123502 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 2 347 17 370 371 167 31.0 3e-41 MEMMKANVYDRPGHCEITEVPVPETAPHQVLIKVMSCGICKGADVALAGGGFLAEFPLLN GHEFAGYVCKVGSDVKTFKVGDRVTADNTVLCDDCYYCRKDEPLYCENFYSLGCNGPGGF AEYVVVNADKVFPISDNLSFNEAIFAEPTACAVHSMDRVQVQFGDDVLVYGCGPTGIILI QLLMHSNANRVVVCGPSQDKLDILKKYGCKETILMDRNDPGVHEAKLREIAPKGFDVLVD TTANVDVMESMIKFGKMGAKFMMFAMPHAGAKWAIDPEYWYLHEIQLIPTWAQTHCFGRA LEYLESGKVQVKDLVTHEMPLDDYDKGIALAAKGGPGTLKVILHPNVEE >gi|224461045|gb|GG657759.1| GENE 1756 1833579 - 1834529 1254 316 aa, chain - ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 6 308 5 306 309 317 55.0 3e-86 MGNVVSTREAYGRALCEFGADEKIMVFDADLTICTMSCYFAEKYPERFFNAGIAECNMAG MAAGAAASGKTAFCHTFAMFAAGRIYDQVRNSIAYPGLNVKVVGTHAGLSVGEDGATHQC IEDLSLMRTIPGMTVICPSDANETREAVKAMIGYNGPCYLRLGRSGVECVTDSADGYKFE LGKGVQLKDGGDVTVIATGLMVQEALKAAALLKEEGIEARVIDLHTIKPIDKEIIVKAAK ETGAIVTTEEHNIIGGLGAAVSEVIGETCPVPVVKHGVEDVFGHSGTAEALMVKYGLTPE KLAAKAKEAIALKNRK >gi|224461045|gb|GG657759.1| GENE 1757 1834532 - 1835374 973 280 aa, chain - ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 4 271 2 269 270 303 54.0 2e-82 MEEKRVKELALTAAKIRRKALEAIEAAHSGHVGGSFSVADILAVLYFEKMHIEPSDPKNP DRDRFVLSKGHCTPTMYATLALRGYFPVDDLMTFRNVDSYLSGHVEMTKVPGVDMSAGSL GQGLSAAVGMALCGKVDKKDYRVFAALGDGEIQEGQVWEAAMAAGNYGLDNLTVFVDNNN LQIDGTVEEVMSPYPIEDKFRAFKWNVITIDGHDHGQIARAVDEAADVKGRPTVVVAKTV KGKGVSFMENNVKFHGSTPTEEQFSQAFSEIDAVIASLEV >gi|224461045|gb|GG657759.1| GENE 1758 1835409 - 1836176 196 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 12 250 1 238 242 80 29 4e-13 MDYRNFNEDFSLKGKTAIVTGAASGIGFEIARMYARKGANVVSFDLSEPAELPAYMEQHG AGYMAYAGNITETEAIEACVAQTVERFGSLDILVNCAGIGVVEGVLEHDEALWDKTLGIN LTGTVRFMKAAAKVMKENGGGKIINMGSQAGVVALEGHLTYGCAKAAVIYATKQFAMEMA QYNINVNAISPTIILTPMGEENWNNERGEEFKKKIPAHRFGYPEEVAACAVFLASDAASL INGANLVIDGGFTIC >gi|224461045|gb|GG657759.1| GENE 1759 1836210 - 1837250 1391 346 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 345 1 345 347 326 50.0 4e-89 MKNRAAYMTDLDKMEIRDIEMPKAGAKEVLVELEYVGICGSDVHYFHDGRCGDYKVEGDF MLGHECAGTVVELGEGVENLKVGDKVALEPGITCGQCEFCKTGRYNLCPDVQFLATPPVQ GCYENYIAFPENMCFKLPENISTKEGALVEPLSVGMHAANQGDVKLGDSVVILGAGCIGL VTLLACKAHGATDITVVDVIPKRLDYAMKLGATRVINGKEVNAVEEMDKLTGGAGVDKVF ETAGSPVTIQQTPYMVKNGGTIVLVGISAQEKIEYNFAKIMAKEAKIESVFRYRNIYPQA IAAIADGMIDVSGIVTHEFDFDDIQEAFDCAINNKDEVVKAVIKIK >gi|224461045|gb|GG657759.1| GENE 1760 1837419 - 1838423 1077 334 aa, chain - ## HITS:1 COG:CAC1351 KEGG:ns NR:ns ## COG: CAC1351 COG1879 # Protein_GI_number: 15894630 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 3 323 2 313 319 108 24.0 1e-23 MKKKVISVLLCAAMVATMAIGCSKSDSGSSDDKKDSGDKKDSYKVAYIARAQSDSFAAWL ANELKAEFENYDDMTLEVFDGEANDEKENTMIENAISSGFDGIIIQANNGEAQLPYIQQV VDAGIPCITTNPRVECEGTGSIDADPYEQAKVNCELAVDQIPENAKVVVLLGPAGNFHST ERRNAWEKEFFEKRPDVEILAEDIANWNKDEAMSLMEDWVQAYGDIDAVVSMNDNMAAGA IEVVKDNDKFKDMLAYGVDGTAEACLLIKEGKMTSTGLQSAIDLAKMNAEAIHSVLTGDK KITDINDNVPAPLITSDNVDEYIQMYKDNGQIKE >gi|224461045|gb|GG657759.1| GENE 1761 1838501 - 1839496 1394 331 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 18 306 35 324 330 214 43.0 2e-55 MNKSKFKNSKFVEKYSIFIVLLAMFILCAVLNENFLSVNNLTNVARQLSVGTIIAYGEML LVIAGLIDLSVGSVLALAGVLSIACYQSTGSLLLALLLAVVVGVLCNLVNAVLVTHFDVP AFIATLAMQTMARGAALLYTKGQNLLQLKDFTVFGQGSVGPIPMPIIFMVVITIITWYIM NHTRYGRSLYAIGGNEGAAIASGINVKKNKYITYIINGVFAGIAGVLFMSRVNAGLPNGA VGYEMEGLTATIVGGTSFSGGVGTTMGTLAGAFIIGFLNNIMNLTGVDSYVQQIVKGAII AFAVVLDIRSKNKKTRKVILVADDAKKEEAK >gi|224461045|gb|GG657759.1| GENE 1762 1839501 - 1840988 1717 495 aa, chain - ## HITS:1 COG:SMb20713 KEGG:ns NR:ns ## COG: SMb20713 COG1129 # Protein_GI_number: 16265168 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 1 487 17 504 506 464 47.0 1e-130 MRVSGINKSFPGVKALDNIDFAVRKGTVHALCGENGAGKSTLMKIINGLYKPDSGQIFID EKPVEIKNPIQAQSYGIAMIAQELNYVPEMSIEENLFLGRLPVNKIGKIDWRKVRKETLR FLEQEKLPYDPEQKLKTLTVSDIQMLEIIKAISNNADIVIMDEPTSAITNREVEVLFEKI AELKSRGVSIIYISHKMEEVFRIADDITVLRDGTVVETHPASELDLDTVIALMVGRKMEN VYPKEEVPVGEPILEIKDLESRGVFKDINFYAKKGEIVGFAGLMGAGRTETMRAIFGLDP YDGGEIKVHGKPVHIKKVRDSINNKVVMLSEDRRRYGIVPIRSVMENASISSLDKFIYGG RSHPREEKKLVGEYFDKMNVKTPSLETAIQALSGGNQQKVLLAKWMLRDPDVLILDEPTR GIDVGAKFEIYRLMTELVKEGKTVIMVSSELPELIGMCDRIYVMNKGMITGCLNRDEFSQ ETIMRFATGTEKAEV >gi|224461045|gb|GG657759.1| GENE 1763 1841457 - 1842413 872 318 aa, chain + ## HITS:1 COG:lin2199 KEGG:ns NR:ns ## COG: lin2199 COG1105 # Protein_GI_number: 16801264 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Listeria innocua # 1 309 1 304 310 158 35.0 2e-38 MIHTLTLNPAIDRILYLKELEKNVTNRVRKTTDTIGGKGTHVSINLKLLGQNNNAFGICH GENGRQVIQMLSGHGIDVRFNHYMEEGKETRTNYLLIEDSTDCTIVAESGVTLSERELDE LLATMKEVIRPGDYLIFSGDASNSPDPSIYNKILHTFRERDLKFFLDTSGASLKECIQES PYMIKPNLDELSTLAGYDIPEDDASIIRAIDSLDKYGVEITAVSLGGDGSIVKTPEGVFR VHPPQVKVVNTIGCGDCYLAGFVYGLSQGYDMEETIRTATGVSAATAESQLSAGFDTSRA TELKNQVTIEKNPLIILK >gi|224461045|gb|GG657759.1| GENE 1764 1842425 - 1843030 657 201 aa, chain + ## HITS:1 COG:lin2198 KEGG:ns NR:ns ## COG: lin2198 COG0235 # Protein_GI_number: 16801263 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Listeria innocua # 6 193 3 188 216 137 38.0 2e-32 MSNLSYYEMRQEMVTVARLMWERRLTNAAGGNFAVRVDDNRILMSPSLMSEEKHCDMKPE DFLLIDYDQNILEGEGRLSREGLMHVLILSNFKEIECTIHAHPFYCMPFVAQCKPIPNVT EATMGRGEVGCIEWTKAYSEELSRNVYQYFEDHRELAEKKPIGMIMPKHGVVVSGPSIYL AYSMLERIECDAFCTITKNLI >gi|224461045|gb|GG657759.1| GENE 1765 1843056 - 1843880 1018 274 aa, chain + ## HITS:1 COG:BH1553 KEGG:ns NR:ns ## COG: BH1553 COG1349 # Protein_GI_number: 15614116 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 1 248 1 230 251 134 33.0 3e-31 MYSHERKAKIIDLLKAQSSVSVNILADMLHTSKETIRRDLKELESEGLLTRTHGGAITNG NSRSVGASAKYGDTVLNNEYPFALRHVRNIPEKKMIAQRAAAFIENRDTIFIDNSSTTLF LMDYIPREIHLTIITNSIKVLLEAAKLENPNLSLISLAGFYNCNNYSVYGTRTIKSAEDF FPNKSFISCTGVTLENRLTDISLNEVDTKKALMSKSKETYLLADHTKFEINGPFYLSDFD AIDYIVTDKYDYTPQTGNNIRTITSKNNIKIITS >gi|224461045|gb|GG657759.1| GENE 1766 1843898 - 1845364 1476 488 aa, chain + ## HITS:1 COG:TM1073 KEGG:ns NR:ns ## COG: TM1073 COG1070 # Protein_GI_number: 15643831 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 1 483 3 468 476 291 34.0 1e-78 MNILAFDLGASGGKLFLASIDGGKASIENIHRFDNVSYQINDCLYWDIINIYKEMNTGIK KAVELTGDSIDSFAIDSFSNDFAFIDDKGALLTPVRCYRDKRTQRHAEKIYGRLSREELY RLSGNQNALFNTYMQLAAMCEDGHDYILKNAYKMLFIPDLLINFLTGKTISEYTLSSVSQ LYDFKKDDWCQEILDSYSIPRSLFGTLTKPGTLLGRTQDSYNKYMETKGFPVSVVCEHDT ASAYLSSPLTSDCALISCGTWALIGTELDSCVITPEGYRVNLANEGGYEGHHRLLRNVMS SWFIQETKRYYKEHGKDYSFEELGSLAEAAEPFAYLFDPDEDLFYEPGNMPVKIQQFCME HYGSRPESTGEIIRCIYESLAMKFRWTIEQLERISGRSLPVINMMGGGAKASMLCQFTAN AASRKVIAGPDEATAIGNITVQLISTGAAQTLDEAKEIMRSSYETKEYIPRDTDQWNLKY REFLKLLK >gi|224461045|gb|GG657759.1| GENE 1767 1845407 - 1846219 950 270 aa, chain + ## HITS:1 COG:lin2979 KEGG:ns NR:ns ## COG: lin2979 COG0235 # Protein_GI_number: 16802037 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Listeria innocua # 2 270 3 272 273 350 57.0 2e-96 MKNILESPIITEICDMTANMYRLGWDERNGGNISWLLDEQELAEYLDLSQVIRNIPIAFD AAELAGRIFLVTGTGKYFKNVTGNPQENLGIVRVASNGTELELLWGFEGGALPTSEFPTH LMNHMARLKADPEHRIVMHCHPANTIAMTFVHSIDDREFTCTLWQMITECIVVFPDGVGV VPWMVSGTNDIGEATARKIKDCRLVVWAHHGIFGTGRTLDEAFGLIETVEKAAQIYMKIA HLDIKNTIPKEQLKALAETFHAVPREGWLD >gi|224461045|gb|GG657759.1| GENE 1768 1846242 - 1847009 251 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 12 251 4 239 242 101 29 2e-19 MYLQDIFGLDGKVAVVTGGGRGIGQVIACGLAKAGAEVVVISRSGAEETVRMIEKDGGKS YDLRADVTDEPQVEQALASILERSGTIDILFNNAGICMHQSTMEATVEEFRQVVDTNLTG EFIMARAVGRIMIERGIKGSIINMASMSGTIVNIPQWQCSYNASKAGVIHLTKSLAVEWA QYGIRVNSLSPGYIATPMSVDLSPQELIDAWIPLMPLGRMGKPEELIPPVLYLASDASGY TTGSDLIVDGAYSCQ >gi|224461045|gb|GG657759.1| GENE 1769 1847406 - 1848260 618 284 aa, chain - ## HITS:1 COG:BH3372 KEGG:ns NR:ns ## COG: BH3372 COG0613 # Protein_GI_number: 15615934 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 1 256 1 250 266 123 32.0 3e-28 MVLKTGPEEAACDLHVHTACSDGSASVEYVLDYAKRAGLRYIAVTDHDTFAGSRKARAAA GPGGPEVIPGAEISARDDKRGRNVHMLCYCPKDEDGLQRFMDGTLKKRRQQKLQMAWKIS RLYPGFTVEAVEQQAAESESIYECHIMQVLCDLGYTNTAIGPLMEELISSRGSCYVPNSY PSARAAAEAIRDAGGIAVVAHPEQFDSFALVEELAQSGLIQGVEVWHPRNSEAARTRLRQ LARQYDLAETGGSDYHGQYAKTPNPLAKCTCTPQQAEKLKERAG >gi|224461045|gb|GG657759.1| GENE 1770 1848262 - 1848711 596 149 aa, chain - ## HITS:1 COG:rpiB KEGG:ns NR:ns ## COG: rpiB COG0698 # Protein_GI_number: 16131916 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Escherichia coli K12 # 1 145 1 145 149 187 64.0 5e-48 MMKIGIGNDHAAVDMKNEVVEFLKEKGYEVVNFGTDKKESSNYPEYGRKVAEAVAAGEVD LGILICGTGVGISLAANKVKGIRAVVCSEPYSAKLSRQHNNTNVLAFGARVIGIELAKMI IEEWLNAEFMGGRHQDRIDMITEIENENE >gi|224461045|gb|GG657759.1| GENE 1771 1848803 - 1849582 694 259 aa, chain + ## HITS:1 COG:CAC0522 KEGG:ns NR:ns ## COG: CAC0522 COG0561 # Protein_GI_number: 15893812 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 1 250 1 249 265 139 33.0 7e-33 MIQLVASDLDGTILQNDAQHVSPRIFELIMELKRKGILFAAASGRQYSNLRGLFEPVKDE ISYIAENGSLCIHKGQVLSRGIIERELGLEILDSIKEYGKCDCFLSCESGGYMDSDNAEF IRHMTEVVKFDIRHVDDLKKIQEPFLKIAVCSFSGTHDMAPFFKDRFHGRINVVTSGNLW VDFIVPDATKGNALSALLDHLHIPVENCMAFGDQYNDVEMLQLAGEGYAMSNAAPGIAYY SDYVTDSVEEVLEDLVSSL >gi|224461045|gb|GG657759.1| GENE 1772 1849528 - 1851000 1457 490 aa, chain - ## HITS:1 COG:slr2077_2 KEGG:ns NR:ns ## COG: slr2077_2 COG2199 # Protein_GI_number: 16330004 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Synechocystis # 324 474 8 167 167 108 40.0 4e-23 MENNGKRKDGSLSYLKYVLIIAALLAAMIAAVVLYYMDMNTKLLSEAHRNLKTENEYKEQ YFSQFISSRMNWYRTVAAFCDVPEGSGAENWHVILKEYSSDDMRFGIADAHGRIYFGENQ SADISGRDYYKKVMQGEEVISDVLTDSWDGQESVLMAVPIWKDGHVCGAVCAEYTTQNLG LALNTSTTEKAGATLVFDRTGKVVASYKGMEDFSTIYDMLETMQYKDGNAVEKLKKEAAS GDSGYMTYYNNDKVRLFYYQPSEYNGWTICSLVVTDAEEKVLQELKATSLWMLAGVVAAV VLILLTSISGIRHVEKRVKKMQRDFLTGCYNRVTGKRIVEKGLHVDQNRLFGACLFIDVD NFKGINDTYGHDEGDRILIKVGQILMGNMRESDVVIRFGGDEFVIWMYRVDNVKVAEDAA GRILKAAYDETGISLSIGIAMAEPGEKNYDTVMKRADEALYRAKAKGKNQYAVYSEDTRS SSTSSTESVT >gi|224461045|gb|GG657759.1| GENE 1773 1851139 - 1852644 1565 501 aa, chain - ## HITS:1 COG:BH1873 KEGG:ns NR:ns ## COG: BH1873 COG2160 # Protein_GI_number: 15614436 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Bacillus halodurans # 1 499 1 495 497 573 53.0 1e-163 MIKSKEYKFWFCTGSQDLYGEECLAHVAEHSRRIVEALNASGALPYEVVWKPTLITNELI RKTFNEANTDETCAGVITWMHTFSPAKSWILGLQEYRKPLLHLHTQFNEEIPYDTIDMDF MNENQAAHGDREYGHIFSRLRMERKVVAGYWADPKVQKKIGSWMRTAVGVIESSHVRVMR IADNMRNVAVTEGDKVEAQIKFGWEVDTYPVNEIAEAVAEVSKSDIGTLVEEYYDKYDIL LEGRDEKEFREHVAVQAGIEIGFERFLEERDYQAIVTHFGDLGSLKQLPGLAIQRLMEKG YGFGGEGDWKTAAMVRIMKIMTEGVKDARGTSFMEDYTYNLIPGKEGILQAHMLEVCPSV AEGPISIKCQPLTMGDREDPARLVFTSKEGPAVAASLIDLGDRFRLIINDVDCKKTEKPM PKLPVATAFWTPQPDLQTGAEAWILAGGAHHTAFSYDLSAGQLGDWADAMGIEAVYIDKN TEIRQFKNELRWNAAAYKLGI >gi|224461045|gb|GG657759.1| GENE 1774 1852680 - 1853378 777 232 aa, chain - ## HITS:1 COG:VCA0244 KEGG:ns NR:ns ## COG: VCA0244 COG0235 # Protein_GI_number: 15601012 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Vibrio cholerae # 1 231 1 230 230 293 59.0 2e-79 MLEQLKREVYEANMQLPEYGLVTFTWGNVSGIDREKGLFVIKPSGVAYDRLKPEDMVVMD LEGHKVEGGYRPSSDTDTHVVLYNCFADIGGVVHTHSSWAACWAQAGRDIPCYGTTHADY IYGSVPCVRNLTREEIEEAYERNTGVLIADEFELRDLDHNATPAVLCKNHGPFTWGKDAS EAVHHAVVLEEVARMAARCEAINPGVKPAPRELQDKHYYRKHGADAYYGQKQ >gi|224461045|gb|GG657759.1| GENE 1775 1853412 - 1855004 1769 530 aa, chain - ## HITS:1 COG:CAC1344 KEGG:ns NR:ns ## COG: CAC1344 COG1070 # Protein_GI_number: 15894623 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 5 529 8 533 534 697 62.0 0 MSDIIKAIASGKTALGIEFGSTRIKAVLVGEDNAPAASGSHDWENRLVDGIWTYDLDEVW SGLQDCYRKLAEDVKARYGIVLERVGAIGFSAMMHGYMAFDEKDELLVPFRTWRNTITEQ ASRELMSVFRYNVPQRWSIAHLYQAILNGEEHVADVRFFTTLAGYVHWKLTGRKVLGVGD ASGMFPIDTVSKNYNNRMIGQFNELVAHKGYPWKLEELLPQVLLAGEDAGTLTEEGAGLL DPSGHLRAGIPLCAPEGDAGTGMAATNSVAVRTGNVSAGTSVFAMAVLEKELSKVYEEID MVTTPDGNLVAMVHCNNCTSDLNAWVGLFGEFAESFGIEADTDRLFSTLYQKALEGDADC GGLLAYNYFSGEHITGFEAGRPLFVRTPKSRFNLANFMRVHLFTSLGALKTGMDILLKSE GVKLDTMLGHGGLFKTKGVGQQIMAAAIDTPVSVMETAGEGGAWGIALLAAYRREQTGEA LADWLSANVFGGDIGTKIKPAPADVEGYETFMRRYAAGFPIERAAIDHLE >gi|224461045|gb|GG657759.1| GENE 1776 1855034 - 1856083 1386 349 aa, chain - ## HITS:1 COG:YPO3905 KEGG:ns NR:ns ## COG: YPO3905 COG1172 # Protein_GI_number: 16124037 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 19 343 1 313 330 163 36.0 4e-40 MAMTEKKPAGVKRLRIRSMSDTNLLLMITIGVFILMYVCAIVFQGSGFLKPQTFFNILNA NAALLIASCGLTIVMVTGSIDISVGGVAALVSMCCAVYLDYMNGNIFVSALIALGIGLGF GLVQGFLVAYLDIQPFIVTLAGMFFARGMTTIVHTNPFNVENKAFVTLKETRITVPGMGS VNRIGKYVDAYVEIGVVVALLLVVLLFILLRWSRLGRGFYAVGGNRQSALMLGINVKRTR FIAHLLCGVLAGIGGYVYFLHVGSGAASHASGMEMNAIASAIIGGTLLTGGVGNIAGTLF GVLSLSLIQNIVSSAGLDQAWWTGITIAGMLCLFLIIQSIVMARKKGTS >gi|224461045|gb|GG657759.1| GENE 1777 1856085 - 1857182 1258 365 aa, chain - ## HITS:1 COG:YPO3906 KEGG:ns NR:ns ## COG: YPO3906 COG1172 # Protein_GI_number: 16124038 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 28 315 27 298 339 135 36.0 1e-31 MQKNNTKKSSINQIAGKMAGKQIFIPIAALLLLAIFNLIVDPSFFKISMDVNSAGDQVLS GYLITILDYGSELAILAIGMTLVTAASGGQDISVGAAIAIAGSVILRVLCGTNSRPDELQ APIIVAFLVACVVAMLFGAFNGILVAGFNIQPMVATLILFTAGRSVAAWINNNELPVVVS DKSFTYFGGFIPGIPIPTPFFIALGCIIITALALKFTNLGLYTQAVGINASSSRLNGLNP AFIKFLSFVILGLCVAVAALIKVSRISSINYSVIAKDIEMDAILAVALGGNALSGGKFNM TASVLGAYVIQFLTTTLYKFNVKSDALSAYKAIVVIVLVVISAPVVRDKMSTVFKKLTLK KKEVG >gi|224461045|gb|GG657759.1| GENE 1778 1857169 - 1858710 1749 513 aa, chain - ## HITS:1 COG:SMb21588 KEGG:ns NR:ns ## COG: SMb21588 COG1129 # Protein_GI_number: 16264776 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 10 511 8 504 505 461 50.0 1e-129 MNALVKENAILEMRNIHKSFPGVRALQAVDFTLCEGEIHALMGENGAGKSTLIKVLTGVY LKDEGEIHLKGLDKAAVIRSPQDAQNLGISTVYQEITLCPNLSVAENMYIGRGKGLGQSW RKMNEAADKILKNLDIPASATQQLSDCSIAIQQMVAIARAVDMECKVLILDEPTSSLDEQ EVEKLFGLMRDLKARGVGIIFVTHFLEQVYEVCDKITVLRDGKLVGEYEIKDLPRVQLVA KMLGKELNDAEEIKDESLVYEQDDTVPPVFEAEGLQSDAGIKPFDFYIRKGEVNGFTGLL GSGRSECIRAIFGADRIIGGTVKKDGKKIKISKPIDAMKNGIAYLPEDRKGDGIVGDLSV RENIILAAQVLEGFFKPFSKAKANEIADEYIKLLDIKTASADTPIKSLSGGNQQKVILAR WLFTHPDYLILDEPTRGIDVGTKIEIQKLVLKLASEGMSVTFISSETDEMLRTCSRLIVM RDRKTVGELSGKDLSQSSIMGMIAGGDKDNAEE >gi|224461045|gb|GG657759.1| GENE 1779 1858813 - 1859802 1242 329 aa, chain - ## HITS:1 COG:SMb21587 KEGG:ns NR:ns ## COG: SMb21587 COG1879 # Protein_GI_number: 16264775 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 50 301 35 290 320 114 32.0 3e-25 MKKRVVAVLLTAVMVLGLAGCGGASDKDADKKDSGDGGAIKVGIINNDPNESGYRTANDK DMKEMFTKENGYEASFAYSLKNDEQITAAQKFIQDGVDYLLLSAADTAGWDSVLKDAQDA GTRVILFDRTIDADESLYEASIVSDMEKEGETAVNWMEEQGLDAYNIIHIQGVMGSAAQK GRSGALDAAAKEKGWNIVTQQTAEWNAEKAQQIVQSAIDSGEEFNVIYAENDDMAKGAVA ALDKANISHGVGKDVIVMGFDCNKWALEELLAQNWNYDGQCNPFQASYIDEVIKTIEDGK EIEEKTIIMDEKGFDATTITEDDVEQYGI >gi|224461045|gb|GG657759.1| GENE 1780 1860193 - 1861284 804 363 aa, chain + ## HITS:1 COG:BH1875 KEGG:ns NR:ns ## COG: BH1875 COG1609 # Protein_GI_number: 15614438 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 334 1 335 375 177 30.0 4e-44 MAIKYKWLAGRLRELIPDYIENGINKLPTEQELCRRFKVSRQTARLALSLLEKEGLIEKK RGSGSYITGLTADPCANVIGILISDDSEYIYPGVINDIKGTLSQNGFSAKVYVTRNRIES EREILSGLLDTPPRGLIVEGSKSALPNPNVDLYRRLMKKGCAVVFLHNYYPALNDCMYVK DDNAGGSALLVKHLTGQGHTAIGGIFKSDDQQGPERFQGFVEAMRDACLPVPDERIGWFS SRDLDKLERFQDTGFLKRFVLESLESCTAVICYNDMIAYFLIKELKLAGYRLPDDMALTA FDNTYLSSSGILYFTTLTHRSHEMGNTAARMMVSKLKGSPAVPQEIPWRINLKESTSENM GLI >gi|224461045|gb|GG657759.1| GENE 1781 1861281 - 1862897 1659 538 aa, chain - ## HITS:1 COG:BH2109 KEGG:ns NR:ns ## COG: BH2109 COG4753 # Protein_GI_number: 15614672 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 2 534 3 521 525 158 27.0 3e-38 MKVFLVEDESVIREGLRDKIPWEQYGYRFVGEAADGEMALPLIRKARPDVLITDIKMPFM DGLSLSKMVRTEFPKIKIIIISGYDDFEYAREAIEAGVDQYMLKPVTRAALRKVLLELKE KIAQDVQQDAYRSQFQSEMREYEQFSRRQFFEKVLGGGEISVKDIYEEAGKLSLELSASS YNLLFLCLQEKAGTLSDGRAERFMRRQEEVLHYFLRHPQYIPFRWNANCYGVLVKAENGQ MEELTEKALGHIRQICSQEEDQMDWYVAVGRPVERLSLLSECYRSVNHYFAYRFIMPDLH LLTESTLASYLTPGEENNIGDVDPSKMAPEIIRDFLSRGSSSEIHDFVESYLQSIREALE SRMFRDYVVLNIRFTVMAFMESIGAEQEEYVEEMDHKLWDIHMKPSEVFDYFVDTLQAAV CIRDRRSSYQSGRALRHALEYIDSNYAMESLSLSSVAAEADVSASYLSAVFSQSMQKTFI EYVTEKRMEKAKKLLRATDKSSGEIALEVGYKDSHYFSFVFKKTQGVSPREYRNGKKD >gi|224461045|gb|GG657759.1| GENE 1782 1862946 - 1863971 928 341 aa, chain - ## HITS:1 COG:SMb21587 KEGG:ns NR:ns ## COG: SMb21587 COG1879 # Protein_GI_number: 16264775 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 47 331 27 306 320 191 42.0 2e-48 MGQRAKRKLRLISSVLAVLVFLSGCGQDFHKEGEQDDVISKDDSLTVVGVSQIGSESVWR TANTASIQNTFSKENGYFLIFDNARQKQENQIKALRSFISQQVDYIVFSPIVEDGWDTVL QEAKDAGIPVILMDRKVKVKDESLYTAWVGSDFAEEGQNAGRWLAGHLKEEGRAGEEINI VVLQGTNGSTSVIGRTEGFDSVAAQHDNWNILEQADADFTTAKGREEMKKMLHKYEDIDV VVSQNDDMTFGALEAIGEAGQSTGTDGGIILISFDATKSALEKVEQGIINVDIECNPEQG AYIEEVIRVLESGGQAEKEYFVSERVFTKKNVASVIGDRSY >gi|224461045|gb|GG657759.1| GENE 1783 1863975 - 1865507 1738 510 aa, chain - ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 226 502 312 596 602 192 38.0 2e-48 MNKTEDRMKREKFFAKKSVDNKIRFPIKNKIMLLSAMAALPFLIMVVYLLVSMTNYSRAY DDIVRNLTIANNYNLDFKEEMDESLYKLVVGYVTFDNISEKDTLKDPYVMIDELRSEFTK LMDITTEAESRVWLESLLRNIDTLQKRVDDIVENVSDGERYDENIEELDNNIYILTELIQ DDIQYYIYYQTQSMEEVTSNLNRQMDDFIVICIVLVVLLVAAVAVATVLTASGILRPIRE LYDATGKIAEGDFEVRASADSRDEIEVLAHGFNNMAGNMQSLIGKIKEDEQKMRRADLRL LQEQINPHFLYNTLDTIVWLIEGNETEQAVEMVVTLSDFFRLVLSKGKEFISIGQEEQHI RSYLEIQEMRYHDILEYEFWIDPVLYDYQILKLTLQPIVENALYHGIKYKRAKGTICVSG EKKGDIICLTVSDDGVGMEAEELRQLREEIERPCGETKKGFGLANVNERIHMYFGAEYGM SISSVKGKGTKVEITIPAVKVGEQHNERMR >gi|224461045|gb|GG657759.1| GENE 1784 1865578 - 1866216 834 212 aa, chain - ## HITS:1 COG:SMb20313 KEGG:ns NR:ns ## COG: SMb20313 COG2376 # Protein_GI_number: 16264047 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 1 212 1 212 213 187 51.0 2e-47 MDTFKNRDGKPVLLAMVKAVQDNKAYLGEIDGLIGDGDHGMNMNKGFTVFEERYGKKEIG FTGGLRELGMVLLNEIGGSMGPIYGTVFMEMAEAGDGFEEIGLAQFSQMLEASLEGLSDI VEARVGDKTLIDTLSPAVYTLKAEAKTKGDFTDALDKMKGAAKAGRDSTRDMAAKFGRSS RLGERSRGVLDAGAVSCCVILEAMADGIKELL >gi|224461045|gb|GG657759.1| GENE 1785 1866228 - 1867223 1341 331 aa, chain - ## HITS:1 COG:YPO3350 KEGG:ns NR:ns ## COG: YPO3350 COG2376 # Protein_GI_number: 16123500 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Yersinia pestis # 1 331 1 332 333 401 62.0 1e-112 MQRILNRPDDVVDEMLKGFLKVHKNIVEATANPRVVKARNIPAGKTGVVTGGGSGHKPAF IGYVGKNICDVAAVGEICSSPTAAAFLDAFRTADQGKGVACLYGNYSGDNMNVRMAVKMA GNEGIDVKTVVANDDVASAPKEKRDKRRGVAGEVLMWKIGGAKAAKGADLNEVTAAAQKA IDNTRSVGIGLTPCTLPAVGHPNFKIEEGTMEVGIGHHGEPGIEVCKLESAAKMAKRMTD IVLPDLPFARGDEVAVLVSGLGATPVMELYVLYDEIDRLLADKGIRVYKSYVGDYFTSLD MMGATLTVMRLDSELKELLDMPVECMGMTQL >gi|224461045|gb|GG657759.1| GENE 1786 1867238 - 1868437 1196 399 aa, chain - ## HITS:1 COG:no KEGG:Slin_0968 NR:ns ## KEGG: Slin_0968 # Name: not_defined # Def: hypothetical protein # Organism: S.linguale # Pathway: not_defined # 1 394 7 403 405 368 46.0 1e-100 MSVIREVFREGEGILKLTPTWVPRGFNEPGKRLRLHPDDYYAFGMDRGGICERWLGSVTR AMNGPKTGETEGMSYVSTGRGEPGSVLFAEAVGELKAELVGEELWERYGTWPAYAKLYDY DRPLFFHLHLDDRHAEKIGRMGKPEAYYFPRQYNYSMGRFPLTYFGFDPSVTKNEVKACL EHYDARDNKITELSRAYRIRLGTGWYTPAGVVHAPGSAVTYEPQWNSDVNTIVENVTMGE VNPHHLLTDCQPESEKGNIRALMDQIDWKESTRPDYKETYFREPVKRPTGQRRIREQWVA YANDWVAAKEVTVEPKSKAVLTDSACYCALIVQGHGSFGRYECETPVMLRFGDCSADEFF VSEKAAKKGVVIENNSCCEPLVILQNFANNNKEVPKEVK >gi|224461045|gb|GG657759.1| GENE 1787 1868450 - 1869862 1676 470 aa, chain - ## HITS:1 COG:TM0307 KEGG:ns NR:ns ## COG: TM0307 COG2407 # Protein_GI_number: 15643076 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Thermotoga maritima # 1 468 1 472 473 436 43.0 1e-122 MRKKPVIGIVGLSDGDPQVHEQLKGIVKEQVDAIVNALKASGEVEVVEAGELVCSVRTAK EQAEYLKGMDVDGTILSYGVFAFPNFSAVVAQNGKGPYLLAANLNPDWPGMVAMLAAGGA LNHLGIRHFRASGDVTEPEVLKKYIRFARCARVVTRLNGQKYGLIGGRSLGMYSATVSMQ DWQKKFGVDVDHMDQSELVRLAEEVPEKKVEKALGWLEDNMGEIRYNGSSFTPDKLKTQI SHYEALKKIIKENEYDFVGVKCHYEMSRHYCTECICAAFCNDPYDWDGPKEPVVYACEAD SDAALTMQILKLLTDEPVIFMDVRHYDSEYDVMVFCNCGSQSTYYATGTDDHRENLGRTT LYPALDIYAGGGCHVNLMTAPGHATIARLNRREGKYRLTIIPADFVAVPEEKMKETTEEW PHIFAKLPFDHQIFLDKFDANHCHAVYGDKTEELKMICEMLDIDVEILGE >gi|224461045|gb|GG657759.1| GENE 1788 1869878 - 1870552 871 224 aa, chain - ## HITS:1 COG:BMEII1095 KEGG:ns NR:ns ## COG: BMEII1095 COG0235 # Protein_GI_number: 17989440 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Brucella melitensis # 1 208 15 224 224 114 34.0 1e-25 MNEKELKELICDIGRRMYTNGFVAANDGNITVKVNESEYLTTPTGISKGYLRPEMITKVN EKGEVLEGEYKPSSEVKVHLRVYAEREDAGAVVHAHPPYATTFAVAHMPLDSYILPEAVY GLGAVPVVPYAQPSTQALADGLIPYLQDYDAFVLENHGTVTIGQDLIKAYYKTETLEYNA KITYMIKLLGVSHELPREEIEKLLISSKKNNPGGRHPGYVKYDR >gi|224461045|gb|GG657759.1| GENE 1789 1870568 - 1871614 1250 348 aa, chain - ## HITS:1 COG:SMa1156 KEGG:ns NR:ns ## COG: SMa1156 COG1063 # Protein_GI_number: 16263079 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 26 338 23 347 357 97 28.0 2e-20 MSEKYMRGVVAAGNGGVEIVRDVPAPEIGPYEALVRMKSCGFCNGTDFHIIRGEMSVEVD SFPTLLGHEGVGDIVELGSRVRNYKVGDRIMNPIIKLMPGTRYGCTWGAMCDYGVVQDQK AMLDDGREMSELNPRQLECVQIPPDFDVIDGGCLITLNECFSAARNFDVADKDVLVYGAG PMGLATMKYMRYLGAKTIVAIDGVEERLELARSLSGADETINYTKVDKKEALEGRIFDRV IDIVGLTSLLVEGSHLLKPYGIVGSMGVLRNSDAVVDVTKLKNNTLLQMLNFPYGQYAVT AENIELMEKGIIDPKDFYSHVKSVEDIQEVVQLVAEKKAVKVILDLEN >gi|224461045|gb|GG657759.1| GENE 1790 1871607 - 1873112 1285 501 aa, chain - ## HITS:1 COG:TM1073 KEGG:ns NR:ns ## COG: TM1073 COG1070 # Protein_GI_number: 15643831 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 1 491 3 473 476 270 33.0 5e-72 MRYLVVDAGSSNVKIYLAHLDAGKKLHMEEAGRFPTEKVFYLGHLSTDIFAIYGRICSVI KSLADRGIYVDSLGIDSWCSDYGIVDTVSGSVSMPVFYRDKRTDGYVDKVSQVMDYEEIC RLTAQRILTDSTLCQLLAYKEEYPQGLSGSKKILFIGDLLMYLFSGVICSEVSVASYSQL FNMEHEDWEKEMLGRFHIPEAAVPPVVRAGTRIGTVRPDLATYLGIKKTYVTAPAVHDTA SAGVAVPAGEGESWAFLATGSWFLMSMELDAPADRKKSYRYQLSNTGMAFGKVLLKKNIT AMWLVQECRRQWERMGRHYTYPELKDMAGQAEGFTAMVDTEYEGFRHPENMADEICAYLR KTGQYAPRPEDAGKIVRIIYESIALQSVRALKMLEDTTGKKVDVLYIVGGANRIEILNQY IADAAGICVRTGPSEASAVGNALLQAYAMGETASLKEMREIAGNSFGTEEYRPVNTQKWQ RQYKKYVELSGQADRGGRSYE >gi|224461045|gb|GG657759.1| GENE 1791 1873125 - 1873991 1147 288 aa, chain - ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 288 1 288 299 318 56.0 1e-86 MLMNMKELLEVADEHHFAVPAFNAGCSQILKAAIETAEAKHAPVIIEVHPDELEFQGDAF ITHCVKAANDTRVPVVIHLDHGSSYGQIERAIRAGYTSVMIDASRCPFEENIAITKRVAD FVHPLGVSVEAELGTIGIMGNSAEEGTKEITYTIPSEAEEFVKRTGVDTLAVGIGTAHGL YPEGYIPKLRLDILREIKAAVNIPLVLHGGSGNPDEEVAEAVKLGINKVNISSDIKDPFY RQVRKTLEDQTLREPNVIYADAIEVMKKVMGQKMDLLGCTDMAGRYHL >gi|224461045|gb|GG657759.1| GENE 1792 1874004 - 1875470 960 488 aa, chain - ## HITS:1 COG:TM1073 KEGG:ns NR:ns ## COG: TM1073 COG1070 # Protein_GI_number: 15643831 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 3 482 4 468 476 275 33.0 1e-73 MSRVLAVDIGASSYRVMDGTYDGRRLDMKELARFRHSPVLIQGHYHWDIHKMQNELIRVI REAAEQGDAVRSIGFDTFGTDFGLLGEDGNLLDDPLAYRDDISDGMYEAYFKNCEEALYG STGATYRTTGTAHVLKGMAEHGFEILKEARHILLLPDLLAYLFTGKMVNEYTIATTSRLL DIHKCRWDVKLIESLGLPAHIFKPLCDSGTVVGGLKSEITEGIPNLKDTQVTAVACHDTA SAVATVPGLKDCSFISSGSWSVKGIVCDRAYTTEAACRYKMSNEGQPGKKYRLIRNITGL WLLEECVRQWKQEGYDIRIPELAKAAQKQEDFPSMICTDAPDFEKPSHMPEKIQNYCRRT GQAVPVTPAEIMRTVINGLALEYRRHNEELRCVTGRPVTCMYIVGGGRNNRLLNQCAADA SGCTVLCGHPEAASAGNILMQFYALGDIASMEEFSYIAGSDVAEERYEPGQSEKWDGRYK EYVQLVRQ >gi|224461045|gb|GG657759.1| GENE 1793 1875485 - 1876456 982 323 aa, chain - ## HITS:1 COG:ydjH KEGG:ns NR:ns ## COG: ydjH COG0524 # Protein_GI_number: 16129726 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 10 316 12 320 322 160 31.0 2e-39 MNRAEEKKYDILCVGSCVQDILIDGMYPESFDEPVTVLDSVLFTSGGDATNEAVVLGRLG SRTGLVARIDGGPVGEALYHNLMEEKVDLTYVLKDETSRSTTAFVILGKGGEHKFFLHKG YNEGISLDEIDMDMLGQTRAVCIGSLYTSYRLDRGGAKVLMEQAKRAGALTFADMDHDVE NLGPNAMDAVYPYVDYLIPSIDEARYITGTEHEKDAAEALLEKGAGTVVIKLGGRGCYVR SQTDAFYVDPFKVDAKDTTGCGDNFTAGFIHSVLGGKPLYESARFACAAGAVNALETGAH MAVRSERQIEDFMKRFPQKTIER >gi|224461045|gb|GG657759.1| GENE 1794 1876473 - 1877501 1039 342 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 6 342 8 345 347 298 46.0 1e-80 MKVVYLTEPGTMEIAEEVIPEVRKGCALVRIEYNGICGSDVHFYKDGRVGDCVLHGPFVL GHEVSGTVTEVGEGVTELKAGDRVALEPGYACGKCEFCKSGRYNLCPDVKFFAAPPVRGA LQEYVVHPADMCFKLPGNVSTMEGALVEPLAVGLHAASLGEVSLGQSVVILGAGCIGLVT LLAAKARGAANIVVADLHEKRLEYARQMGATHTVNAGGGDAPAKIMEILEGGPDVVFETA GSPVTIAQTAHIVRRGGTIVLVGMSAQSEVNYNFFQVMEKEAVIKCVFRYRNLYPKAIAA ISGGSINVKQIVTHTFTLEEAGKAFETVVEDAQNVVKGIIKM >gi|224461045|gb|GG657759.1| GENE 1795 1877542 - 1878651 1209 369 aa, chain - ## HITS:1 COG:BH1140 KEGG:ns NR:ns ## COG: BH1140 COG3839 # Protein_GI_number: 15613703 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Bacillus halodurans # 1 368 1 364 365 425 58.0 1e-119 MANISMENICKTYPNGVSAVENFSLEIKDKEFLIFVGPSGCGKSTTLRMIAGLEDITSGV LKLDGEVVNEVPARNRDIAMVFQSYALYPHMSVYDNIAFGLRRRKLSRDEVDQKVREAAR ILDLESQLKKKPRELSGGQKQRVAMGAAIVRNPKVFLMDEPLSNLDAKLRVQMRLEIEEL YERLGATIVYVTHDQTEAMTLGTRIVVMKDGIIQQVDTPENLYTRPANLFVAGFIGSPQM NFLKAAVLDKNGVLTLEAGGSTLALPESRQKPLKEKGYVGKEIILGIRPEDIKDAEIFVN VLEASCITARIQVYELLGAEALLYFEHAGSKVTASVHSRTKAREGDTVRLAFDMEKSYLF DMETERSIL >gi|224461045|gb|GG657759.1| GENE 1796 1878669 - 1880462 1733 597 aa, chain - ## HITS:1 COG:HI0614 KEGG:ns NR:ns ## COG: HI0614 COG2407 # Protein_GI_number: 16272556 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Haemophilus influenzae # 13 597 27 604 604 752 60.0 0 MAENRYIGGYPVIGIRPVIDARKGMLDVRGSLEEQTMEMARKAAELMEARLTYSDGKPVR TVIARGTIGRVPEAAACEEQFRREGVQVTLTVTPCWCYGSETMDMDPGTVKGVWGFNATE RPGAVYLASVLAAHAQKGLPAFGIYGHDVQEKEDKEIPEDVQEKILRFARAAVAAASMRG RSYLQIGSVCMGIAGSSVDTAFFEEYLGMRVESVDEVEILRRIEENILDENEYKKALSWT KKNCPEGFDKNPEESRKTSVQKARGWEFVVKSACIIKDLMNGNGRLKEKFPEEALGHNAI AGGFQGQRQWTDHYPNTDFAEAVLNSSFDWNGAREPYILATENDTLNAVSMLFGKLLTGR AQMFSDVRTYWSNESVRRAAAYEPGVRVREAGGFIHLINSGASCLDMCGEVKDERGRAVT KPFYDMTERDIEACLKAAVWCPADQGYFRGGGYSSRFVTRAEMPVTMTRVNLVKGLGPVI QIAEGYTAALPDEVTDILWRRTDHTWPCTWFVPRVTGEGAFRSAYDVMNNWGANHAAISY GHIGADLITLASILRIPVCMHNVEEEKIFRPACWNAYGMDKESQDYRACRNYGPLYK >gi|224461045|gb|GG657759.1| GENE 1797 1880515 - 1881279 221 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 250 1 239 242 89 28 6e-16 MNALDKFSLKDKNVLVTGGAQGIGLNYAMAAAGAGASVALADLNGEKARASAAWLREEYK VETLGIEADVTDPGQVEHMCAVMAGQMGRIDVAFCNAGISINVPAEEMTYEQWRKVIDIN LTGVFLTATAAGRYMIRQGGGSIINTASMSGHIVNIPQPQVAYNASKAGVIMLTRSLAVE WADKNVRVNSISPGYIMTDLIKGHELIPRWKELSPLERMGRPEELQGAALYLASDASTFT TGTDIVVDGAYTCV >gi|224461045|gb|GG657759.1| GENE 1798 1881293 - 1881928 731 211 aa, chain - ## HITS:1 COG:MT0752 KEGG:ns NR:ns ## COG: MT0752 COG0235 # Protein_GI_number: 15840134 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Mycobacterium tuberculosis CDC1551 # 9 205 11 210 218 99 31.0 3e-21 MDRELINQVLAVAKRLDEKNLVNAFEGNISAKKDGLVYITPTGKNKALLKEDMIAVINED KEQIGGSCRPTSELPMHLETYRIREDIGGVVHCHPTFLTAHAICNKPVETKGYPEMMANF KIFEVAPYGRPGTEEILKGAVPVFAHSDVVLLGNHGVLAVGETAEDAMNKVEAAEAITKA LYYAGALGTPLDLSEEECEYFYSIYDSKYRR >gi|224461045|gb|GG657759.1| GENE 1799 1881964 - 1882836 755 290 aa, chain - ## HITS:1 COG:PA2340 KEGG:ns NR:ns ## COG: PA2340 COG0395 # Protein_GI_number: 15597536 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Pseudomonas aeruginosa # 19 289 8 277 277 185 35.0 9e-47 MKKAVVKRDSRSRKAAAKKEVRRWIIGMIILAFALLYFFPILYMILSGFKTEAEAAVPAI FFHPTLVTWQKVLSDISMINYLKNTVFHVLLGTGICLVLGIPATYALVFARFKKEGRGES LYNWFVTTILLPPVAVLIPLYITFKELNLNHMRGGLLFLYVGFHLPLCIWLLYSFFKDVP EEVVEAARIDGCTNRQLIMGIIIPLTKTGIMTAGLLVAVFIWNEFFLGYNLTTNATATLP VYMARFGQQQGQFIAQLSASASISCIPPMIFGWISQKSLIKGLTAGAVKG >gi|224461045|gb|GG657759.1| GENE 1800 1882850 - 1883746 1073 298 aa, chain - ## HITS:1 COG:AGl839 KEGG:ns NR:ns ## COG: AGl839 COG1175 # Protein_GI_number: 15890535 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 292 27 302 306 163 32.0 4e-40 MSKTVKITKKKYPAERTFVVPACVIVAVATQIPFILTIIFSTLQWNIVRPDQGITFSGLK NFIYYLGDSEFYVICLQTLLMIGAALVLCLVFGYLIALMLDCDIPGRTLSRTLILSPFFI MTTTTGVLWKTVILNTNFGWVGTIADWMGIKAIDFVSYYARPLIVFLFVWQWMPFFVLVL LGGLQGIPAEVLERADLDGCSRFEMIFKIKLPMIFNHMQVALMLGLIFLVKEFGLILTTT GGGPGQKSYTLTYYIYKTLFSGSNVGRAAALSVITVVVTLTIINLIFRAIKKRRAVYE >gi|224461045|gb|GG657759.1| GENE 1801 1883843 - 1885207 1459 454 aa, chain - ## HITS:1 COG:SMc01496 KEGG:ns NR:ns ## COG: SMc01496 COG1653 # Protein_GI_number: 15966198 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 40 454 25 436 436 255 35.0 2e-67 MKKRILALLIVLCMCAGLAACAGKSDDKKSKKSSGDEIVVSIATLNNPIVSNLVKLAGEY YKEEGVKLDFAVLPENDLREKATLEASTGGTTYDIYFTGPYEANFWITYGWAENLQPYID KMSDEQKEALDVEDIFPSMLDSLSDPETGDIYALPFFGEASFFMYNKELLENAGVTMPEK PTWDDIYDIAAAVDDEAAGITGMTMRGAPGWGMSGAPFVTIVNALGGKFYDMDWNATVET DEQRAAWEMYKKVLRDAGQDDIITYTYNECISLMNSGKCGIWYDATSNGPNLEADDSLIK GKVGYAPSPAGWLWNWGMNINPNSSDEKKQAAFDFMVWACSKDYVNLSLEKDPSGASTPS GVRASTYELDAYKDLPYAQPTLDALSDLDFNHPCKDEVPYVGLQYIAIPEFQEAGDKMTE ALAAYVTDEITLDEALATTQKAFEQAAEEGGYKK >gi|224461045|gb|GG657759.1| GENE 1802 1885335 - 1886459 1349 374 aa, chain - ## HITS:1 COG:YPO3352 KEGG:ns NR:ns ## COG: YPO3352 COG1063 # Protein_GI_number: 16123502 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 14 371 19 366 371 369 48.0 1e-102 MIQKKGALQMQSKMKALVTHGAHDYRLEEVDRPSAGEGEMIIKVEGCGICAGDLKAFKGG SVFWGDGSAPPYLEVPAIGGHEFVGYIVEMGPGTDKKKTYGIADTDLKVGDRVAVEQIAP CGTCRYCKEGRYHLCVPHNVYGFKNYLNGGFAEYARLTKESLVYKIPEDMPLERALLIEP YACSMHAIDRAAICKDDIVVISGAGCLGLGMITAARKRNPKCLIALDLNEERLKKAKEFG CDITIDPNRESLKDKIMELSDGYGCDVYIEATGHPSSVKQGLDIIRKAGRFIEFSLFLEP VTCDWSVIGDGKELDMYGVSLSYGCFPDTIKGLYTGELMSDGVVSHKFALSDYEAAFEQS GKGTDSVKVVFTFE >gi|224461045|gb|GG657759.1| GENE 1803 1886708 - 1887043 241 111 aa, chain + ## HITS:1 COG:no KEGG:CKR_1531 NR:ns ## KEGG: CKR_1531 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 4 65 57 118 257 67 53.0 2e-10 MKNLKKLRTERNLSQQQLADMLHTTQQNIYKYENGISEPNLETLKNMADHFQTSIDYLVG YTSIRHKIEPVSEYDLNSDEQTLIQKYRKLLPRIRRIVHIIIDEYLVSSGR >gi|224461045|gb|GG657759.1| GENE 1804 1887126 - 1887914 440 262 aa, chain + ## HITS:1 COG:BMEII0436 KEGG:ns NR:ns ## COG: BMEII0436 COG1349 # Protein_GI_number: 17988781 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Brucella melitensis # 6 232 22 247 282 107 30.0 2e-23 MKSASRQSLIYDYIKKHSEVSINHIAQYFNISPVTVRRYVDKLEQNGLVSRKYGKALIAD NSKAELSFYYRSMKNEENKQAIAQLALPHLLRASSVFLDASTTVLELLKLLPHSHALTVY TASSVILSYLKDRPNVTLFIMGGYLSHTDGATLDSETTVNTARQIFVDAAFISCGGFSAE GFFDNATTGIEVKRIMLQNSVHNYLLADHTKFNSNGIFLVDTWAPIQTLICDASFGKKTE RLLETKDVDIEYPKAGSRNIPL >gi|224461045|gb|GG657759.1| GENE 1805 1888101 - 1889837 2439 578 aa, chain - ## HITS:1 COG:PAB1554 KEGG:ns NR:ns ## COG: PAB1554 COG1966 # Protein_GI_number: 14521448 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Pyrococcus abyssi # 1 561 1 574 592 262 34.0 1e-69 MNGIVVLLAGIAILVIAYVTYGKWLAKQWGVDPSKETPAHTEEDGVDYVPAKAPVLLGHH FSSIAGAGPINGPIQAAVFGWVPVLLWVLIGGIFFGAVHDFGALFASIRHKGQSMGEVIA DSMGTKAKKLFITFSYLTLILVVAAFASIVANTFMATYTESGAVDVAASAANARTAMISI LFIVIAIVFGLLVYRRNASLGVSTVVGVIAIAACMAIGFNWHPLYLSNTAWMIIVGIYIT VASVTPVWILLQPRDYLSSFLLYFMMIVAVVGIIGSAFTGSASMDIPAFTGFKDTLAPTG ASLGYMFPALFVTIACGAISGFHSLVGSGTTAKQLNSEKDARPIAYGGMLIECALAIISL CAVGYIWANYASGETVTPTVVFATGISKMVGSIPGLAGTQEVAYSMLVLAVSAFCLTSLD TATRLARYMFQEFWLNPGETIAETTGYKKILTNPIVATIITVILGVGLGLTGYANVWPLF GAANQLLAALGLLGVATWLGKAGKNNKMFYIPMAFMLVVTITSLCFTIKSNVAAISLGGA GVSWCYIRTVIAVLLVILAVVLAVDGIKTLMKQDKKAA >gi|224461045|gb|GG657759.1| GENE 1806 1889908 - 1890441 512 177 aa, chain - ## HITS:1 COG:no KEGG:bpr_I1011 NR:ns ## KEGG: bpr_I1011 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 7 164 9 166 186 108 36.0 8e-23 MTGRELFEKLLASYEASYDIERTCSINGDMYDAHAAFNVTSAKYVLVKKAELWRADCYEH VFFRVKDSFTADDVERFRTQIASYIEPQLVRGGKKWPEKNHMYTYITGVFICENGVPEEV KQAVKRFSFVKNYKWTIRGYSEARLLVFDMENRKVFGSRAARDLVKGYTKAAVMGPF >gi|224461045|gb|GG657759.1| GENE 1807 1890419 - 1890484 126 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLYCITVTAKENFIYDRQRAI >gi|224461045|gb|GG657759.1| GENE 1808 1890677 - 1891936 1582 419 aa, chain - ## HITS:1 COG:STM2497 KEGG:ns NR:ns ## COG: STM2497 COG2233 # Protein_GI_number: 16765817 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Salmonella typhimurium LT2 # 4 412 3 413 429 400 55.0 1e-111 MEGRKIIQVEDKVPFRLLVPLSIQHMFAMFGASVLVPFIFGINPAIVLFMNGVGTLLFIV ITKGKAPAYLGSSFAFLAPAGIVISEMGYQYALGGFVAVGFCGCVLALIIYKFGSKWIDI VLPPAAMGPVVALIGLELAGSAAGNAGLLEEKIDGRNVIVFIVTLGVAVFGNILFRKFLS VIPILIAVIAGYAAAVCCGMVDFGQVAAASFLEMPNFQTPRFSMEAILIILPVLLVITSE HIGHQVVTSKIVGRDLLKDPGLHRSLLGDNLSTMISGMIGSVPTTTYGENIGVMAVTKVY SVRVIAGAAVLSIICSFVGKLSMLIQTIPGPVIGGISFLLYGMIGASGIRILVDSKVDYG ISRNLTLTSVVFVTGLSGIAVKFGNIQLTGMVLACIVGMLLSLIFYILDKLKLTNDREE >gi|224461045|gb|GG657759.1| GENE 1809 1892008 - 1892928 971 306 aa, chain - ## HITS:1 COG:ydjH KEGG:ns NR:ns ## COG: ydjH COG0524 # Protein_GI_number: 16129726 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 295 8 303 322 248 45.0 1e-65 MDSEILIIGAAIVDVLARPVGADVFKTGSKPADEIRMSTGGDALNEATVLARLGKRVRLA TVIGKDMAGRMLAEHCAAEGIVLEDGCFHDDIATGINIVLVEDDGERSFLTNPHGSLRKL SLSHIKMPFSPCTKILCFASIFVSPEIDTAALVRIFKTAGEQGITVCADMTTCKNGETAE DMAPALAYVDYLFANAKEASLITGREAPEESAACLVQAGAANVIIKCGGAGCVVHSRTEC FAVPAEPGVECVDTTGAGDSFAAGFLNALSEGRSLKECAVYANKCGALAVSSVGAAEWSR SLKTLF >gi|224461045|gb|GG657759.1| GENE 1810 1892918 - 1894456 1523 512 aa, chain - ## HITS:1 COG:no KEGG:Amet_1887 NR:ns ## KEGG: Amet_1887 # Name: not_defined # Def: peptidase S41 # Organism: A.metalliredigens # Pathway: not_defined # 1 498 37 547 550 91 25.0 1e-16 MRRWKMKALAFALIMASVLSLAACGQSVKKYDDKSAYGEFLQETEKKNEGLSAPESIPDE YFYKAGRDKETFGGTDFDLWQTVKEQKEMAPWISKEDAEQELAWFLRLLRSYYGNYGRSG GDEAFEVAAGNVMKAFEGDRKKEFGEYEELLGREFAFAVDNDRHFSIGFSTTEECCLLGN QEKSYWKNDGTYYMDKECTKEIEKIGGEAPEKYLRPSIGQEGELTWYPYMISEPGERSRE IEIEYTEQKLFIKKTGKKTVRLAETDYDEDEEVPKKESYRYEERGGIPWIKWNKFPRPER DSSQEFILSASKIKKHPYAVIDLSDNAGGEERTLGGWFEEYTGSLYMTHANVLRRMNKEE LLTEEEDKKAYAEDEAMYLRMGQTEENGYKVIRPHNEKHIENAQRLFLVTSRRSASCAEM MTDSCRAIENTVVIGADTFGCLSGDVTEILWLPVSGVPVSFGASLYQWDEDYFKEGRGFS PDLYLTGKDCEERLELFLEKYEGEEEGKADGQ >gi|224461045|gb|GG657759.1| GENE 1811 1894678 - 1895871 1491 397 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 397 1 407 407 578 70 1e-163 MAKAKFERNKPHCNIGTIGHVDHGKTTLTAAITKTLSQRVEGNAAVDFENIDKAPEERER GITISTAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGVMAQTREH ILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRELLDEYEFPGDDTPIIQGSALKAL EDPSGEWGDKIMELMDAVDSYIPDPQRATDQPFLMPVEDVFSITGRGTVATGRVERGVLH VSEEVEIVGIHEETRKTVVTGIEMFRKLLDEAQAGDNIGALLRGVQRDEIERGQVLVKPG SVTCHKKFTAQVYVLTKDEGGRHTPFFNNYRPQFYFRTTDVTGVCNLPDGVEMCMPGDNV EMTIELIHPVAMEQGLRFAIREGGRTVGSGRVAKIIE >gi|224461045|gb|GG657759.1| GENE 1812 1896008 - 1898077 1966 689 aa, chain - ## HITS:1 COG:CAC3138 KEGG:ns NR:ns ## COG: CAC3138 COG0480 # Protein_GI_number: 15896387 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 1 687 16 686 687 911 64.0 0 MAHIDAGKTTLTERILYYTGVNYKIGDTHEGTATMDWMEQEQERGITITSAATTCHWTQQ ENCQSKPGALEHRINIIDTPGHVDFTVEVERSLRVLDGAVGVFCAKGGVEPQSENVWRQA DTYNVPRMAFINKMDILGADFYNAVEQIKTRLGKNAICLQLPIGKEDDFKGIIDLMEMKA YIYNDEKGEDISIVDVPEDMQDDAELYRTELVEKICELDDDLMMEYLEGDEPSVDALKAA LRKATCECTAVPVCCGTAYRNKGVQKLLDAVIEYMPAPTDIPPIEGVDDSGNDVVRHSSD DEPFSALAFKIMTDPFVGKLAYFRVYSGSMNAGSYVLNATKGKKERVGRILQMHANKREE LDKVYAGDIAAAIGFKFTTTGDTICDERHPVILESMEFPEPVIELAIEPKTKASQGKLGE SLAKLAEEDPTFRAHTDHETGQTIIAGMGELHLEIIVDRLLREFKVEANVGAPQVAYKEA FTKPVDVDSKYAKQSGGRGQYGHCKVKFEPMDVNGEETFKFESSVVGGAIPKEYIPKIGE GIEEAMKSGILGGFPVVGLKANVYDGSYHEVDSNEMAFHIAGSLAFKDAMKKASPVLLEP IMKVEVTMPEEYMGDVIGDINSRRGRVEGMDDLGGGKIVRAFVPLSEMFGYSTDLRSRTQ GRGNYSMFFESYEQVPKSVQEKVLSTKND >gi|224461045|gb|GG657759.1| GENE 1813 1898135 - 1898605 761 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240146972|ref|ZP_04745573.1| 30S ribosomal protein S7 [Roseburia intestinalis L1-82] # 1 156 1 156 156 297 94 1e-78 MPRKGHTQKRDVLADPLYNNKVVTKLVNNIMLDGKKGVAQKIVYGAFNRVAEKTDKPAIE VFEEAMNNIMPVLEVKARRIGGATYQVPIEVRVDRRQALALRWLTTYSRNRGEKTMEERL ANEIMDAANNTGASVKKKEDMHKMAEANKAFAHYRF >gi|224461045|gb|GG657759.1| GENE 1814 1898779 - 1899198 661 139 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240146973|ref|ZP_04745574.1| 30S ribosomal protein S12 [Roseburia intestinalis L1-82] # 1 139 1 139 139 259 91 5e-67 MPTFNQLVKKGRQTSIKKSTAPALQKGYNSLRKRATDVSAPQKRGVCTAVKTATPKKPNS ALRKIARVRLSNGIEVTSYIPGEGHNLQEHSVVLIRGGRVKDLPGTRYHIVRGTLDTAGV AKRRQARSKYGAKRPKDAK >gi|224461045|gb|GG657759.1| GENE 1815 1899408 - 1900451 1210 347 aa, chain - ## HITS:1 COG:VC1721 KEGG:ns NR:ns ## COG: VC1721 COG1609 # Protein_GI_number: 15641725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 4 334 3 330 336 222 37.0 9e-58 MRTTIKDIANYTGFSVTTISLVLNNKADKIPKSTKNKILDAVEKLNYHPNQLAVGLVKKR TQTIGLIISDVSNVFFSTLAKGVEDSCRSQGWNLILCNTNDKHERDMSYIQVLANKGVDG ILFCMARDSDKKKTEESIQLLKKLKIPFVMIDRYLEEADCSSVIVDHRQGGYAAVKYLLG LGHRNIGCVTGPSGLEDSMERLKGYKKALEEYHIPYQHDFIYEGSYDRESGAGAVDFFAG KDISAVFAFNDMSAYGVYNSLKKRGIPVPGGMSLIGYDDIFFSEILDVPLTTVRQPVYEM GAESVRQLIEEVENGVGARKCIVFQPALIERESVGYGPAYEPGGKPI >gi|224461045|gb|GG657759.1| GENE 1816 1900839 - 1901966 982 375 aa, chain - ## HITS:1 COG:lin0289 KEGG:ns NR:ns ## COG: lin0289 COG0624 # Protein_GI_number: 16799366 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 9 374 10 373 378 151 28.0 2e-36 MKYDAETFLMEVLKIPTVNGKDNEKALAVFLRGFLKECGVSAVVQDIDSRHANVVGVLEG KSKETVIWNGHLDTVPYGKMGEWKTDPSVPSKKNGCIYARGASDMKSGLAAMAYVLGRMK RKGYVPSRTIYFCGTCDEEKNGIGAKHLLETQTLGEPALLLIGEPTDLRPGTAQKGCIWL QVKLHGKTSHGAYPGQGINAVEYGIRIFQDLKKKLEEQSHELLGSPTCQITMAEGGIVPN MTPDTAKLMLDIRVIPGITTRMVTEWAQKIIDGYRQETDGELEVEVHIKNDRQAIEIPAD SPWLKKLQWELKLAGLPKEPAGINYFTDASILTKGIPTTPVLLLGPGQPELAHKPNEYIE IEKYLQYIKILDRLF >gi|224461045|gb|GG657759.1| GENE 1817 1902022 - 1902762 796 246 aa, chain - ## HITS:1 COG:mll7663 KEGG:ns NR:ns ## COG: mll7663 COG5426 # Protein_GI_number: 13476365 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Mesorhizobium loti # 2 245 4 253 256 255 50.0 6e-68 MKKVLLAGESWMSYTTHVKGFDSFYTSVYETGEKWLVAALEKGGYEVDFLPNHIAAEQFP YTLEELRSYDCVILSDIGANTLLLPAATFTQSKKMPNRARVIRDYVMEGGSLLMIGGYLT FSGVDAKGKWHDTPVQEVLPVEILTVDDRMEHCEGVRPVIVKEHEALKGIKTEWPEVLGY NKTVAKEEAFVAAVVEGDPFIAFGSYGKGRSAVFTADCAPHWAPPEFCEWESYDQIWQGI VGWLTD >gi|224461045|gb|GG657759.1| GENE 1818 1902781 - 1904055 1250 424 aa, chain - ## HITS:1 COG:no KEGG:GM18_1721 NR:ns ## KEGG: GM18_1721 # Name: not_defined # Def: dihydroorotase, multifunctional complex type (EC:3.5.2.3) # Organism: Geobacter_M18 # Pathway: Pyrimidine metabolism [PATH:geb00240]; Metabolic pathways [PATH:geb01100] # 10 378 4 388 424 83 25.0 2e-14 MHETDTRHTILKNGLLIDPSNGIEAVKDIVIEGDQVIEVCDKAGAEKGDRLIDCAGLEIW PGLIDIHLHVSDLFEIHTNTAYGAAEDGVTTALSPGAGNTFMAPALLGAEMDRGLPLNVG VFLGAANVLGTRLNEEELTALFSGTLGQEDRERKLSHNNIVNRTAQYAVGIKEHMGHFLL PDEKIQKLYAITDQANLMFTSHTQDIGHTLHLFEMAKGRHLHLGHANAAGCGTDEEAARA MKQVIDLCRQKEVSGEFVTTMLREGGGCREGLKMAEPARQMALEALAEHVVTILVSDGQN QSTMKGFGDTRDNIPCLLELAENKVLSKKDAVALMTSNPAKLLAQRTKNEEWRSRYGHLG IGAYANITVVEPNRRHAVYVLTNGRLVSFEKRYLRSGGRAGYWVSKFQTKKSMGIGELPM YDIK >gi|224461045|gb|GG657759.1| GENE 1819 1904076 - 1905353 1250 425 aa, chain - ## HITS:1 COG:BS_argE KEGG:ns NR:ns ## COG: BS_argE COG0624 # Protein_GI_number: 16079029 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus subtilis # 66 420 60 419 436 165 30.0 2e-40 MNKRIEKALEENKQKYIDYLLKLVSIDTHDIGHGIEGGLEAEGQDFMAELFCGLGAEEVV KDPLKEDSIVKCKEQYREGNTGHNYDNRYNVYASFKGKSERSILFNGHIDHMPAENEENW CIPPLSPAVIENRITGLGVADMKAGLMASVMATALLKDAGIELPVTVKYASVCDEEGGGN GSLCAAVSGVKADAVVVCEPTNYELIVAHMGWVFFQVEVEGIAVHSGLKLAGVNAIEKAG KLMDAINELEHRWLLKYKHPLLPPPSSNVGVIYGGEAGSTIPDHCCFKTCVHYLPNLMSH EQVVEEYTGAILRCCEGDEWLKDHKPKISVYQTGNPFEMELAHPFVGAFKEAYKKATGNE VKLTGSPAGCDSRTWHNIVGCPTLQYGPGSLEQCHAVNEYVTVEQYLDAIKIYANLILEW AESAE >gi|224461045|gb|GG657759.1| GENE 1820 1905346 - 1905969 572 207 aa, chain - ## HITS:1 COG:SMa2002 KEGG:ns NR:ns ## COG: SMa2002 COG2755 # Protein_GI_number: 16263550 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Sinorhizobium meliloti # 2 199 7 212 220 121 38.0 1e-27 MRQVLCYGDSNTWGYRPETDGRLMWEERYPGLLSQKLGPGYRVTENGLCGRTTCFDSASE PFVNGLKEAEVCAAVNAPVDIAVIMLGTNDCKEQYGADVEAIALGIGQVADVFERAGAGI ILAAPPVLADLEKSPFYNEFGTGAEEKSRKLAACYESLALRRGWRYLNAEKVTSAGEYDK IHLDKEGHRRLAEAVYQMIARKEERDE >gi|224461045|gb|GG657759.1| GENE 1821 1905966 - 1906778 210 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 6 218 7 216 311 85 29 1e-14 MNQIELRNASFQYPNGFLANDDLNLIVKRGERVAIVGQNGAGKTTAVKMMNGLHKPCKGD VLVEGRNTKDYTTAQIARQVGYVFQNPDDQIFNQTVYAEIAYMPKYYKLDDKEVEKRVKE VAELLEIESYLSMNPFEIPYVTRKFVTIAAILATRPQYMILDEPTAGQDLTGIKVLTRVL GELEKKEIGVVTITHDMEFAANNFERVVAMANKKIIKDGNVRDIFRDDDILRQSKIKRPQ IGQIADSIGLGKDILNAREFVKRYKEVRVS >gi|224461045|gb|GG657759.1| GENE 1822 1906765 - 1907625 337 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 2 276 128 396 398 134 32 2e-29 MAYIELKEVTYTYPLMKEPALKNISCSLELGKFYGVIGENAGGKTTFCNLLRGLIPHFYN GKLVGDMTINGEDIRKIDVDVLSTKMGYIFQNPFTQISGVRKTVFEEIALGLENLGVPKA RMIEKVIEVAKLLKIEELLQNDPNRLSGGQRQRVAFASIIAMDSDIFVIDEPTSQLDPEG TERIFEIIHMLKEQGKTIILVEHKVDLIAEYADEVLVFQKGELLKKGDARTVLSDLELLE HGTMLPQAVILERELRLNGIVLPRVPVTTEECIDLLQKGEAGYESN >gi|224461045|gb|GG657759.1| GENE 1823 1907613 - 1908407 822 264 aa, chain - ## HITS:1 COG:L77627 KEGG:ns NR:ns ## COG: L77627 COG0619 # Protein_GI_number: 15672261 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Lactococcus lactis # 19 233 16 239 266 72 26.0 1e-12 MDYDFARQYMNPKRTGNAIRDLNPMSKVNLMLVLGLSPFIVQNYFYGFGMVLLFILLSAA AGCFRSFFSLYWKVLLLFGVFLFVVKAAFAPGEHVLFRLWGICVTTESIQSGLNIVALVL AFSGAFILFVKTTPMDEFTYALEKKGVSHMVSFVILSSFQTITDLKQNAQVIMESQKARG IETEGNLLKRAKAYIPVMGPLVLNAISSTEEKSIAMDARAFSAPVAHTFLSELPEVAIKE KVIVILFDLAFVGLIAGRIALWLI >gi|224461045|gb|GG657759.1| GENE 1824 1908467 - 1909048 688 193 aa, chain - ## HITS:1 COG:no KEGG:Spirs_3925 NR:ns ## KEGG: Spirs_3925 # Name: not_defined # Def: signal transduction histidine kinase, LytS # Organism: S.smaragdinae # Pathway: not_defined # 4 193 7 196 211 124 34.0 2e-27 MKKFNKLTIFLIPIGIAVNVVGGQLAVLLKLPVFLDSIGTFVVGALCGGVPGALVGLGCG LINAISLPTLLPYTVIGVLFGFLGSFLAKKQMFSKFWKAPINGVIIAIISTCIAVPITAT LYGGFVGTGASVIVTTLMAAGWDVLPATFVSELSSELIDKIICLIIIFFVLKAMPARFVV KLPNGKHFIKEEQ >gi|224461045|gb|GG657759.1| GENE 1825 1909395 - 1909961 930 188 aa, chain - ## HITS:1 COG:TM1558 KEGG:ns NR:ns ## COG: TM1558 COG2316 # Protein_GI_number: 15644306 # Func_class: R General function prediction only # Function: Predicted hydrolase (HD superfamily) # Organism: Thermotoga maritima # 1 187 2 182 182 121 39.0 9e-28 MNREQAHDILMKYMKGENYITHSYAVEAIMKGLARRLAPDEVEYWGIVGLLHDLDEEQCD WQNDISVHGPTSVEILKKEGIDDPVLFDAIKAHNPKCGMKAKTKLQYAVLAADPMSGFVK AVAQIYPDKRIASVKHKSVMKRFNELRFAAGANRDYMEMIEFTGLSLDDLIDVALEEMGA IADVLGLA >gi|224461045|gb|GG657759.1| GENE 1826 1910199 - 1910942 775 247 aa, chain + ## HITS:1 COG:PM0361 KEGG:ns NR:ns ## COG: PM0361 COG0730 # Protein_GI_number: 15602226 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pasteurella multocida # 1 229 1 226 254 122 34.0 6e-28 MELTIQTFIIVCPLLFLAGMVDAIGGGGGLISLPAYLLAGLPPHAAVATNKMSSPFGTAL ATYRFARNHLINVKLAVPSIFAAVAGSFIGSHISLLVPEKVMAYVLVIILPLSAFLVLNK KLFNDSGAEEVTLDGRTYITAVAAAFIIGGYDGFYGPGTGTFLIIAFTIFAKLSIKTANA QAKVINLTTNVTSLIIFLLNGQVLIPLGLAAAACNMLGGYIGAGLVIEKWGEGRKAEYTT RARAACV >gi|224461045|gb|GG657759.1| GENE 1827 1910914 - 1911948 558 344 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569754|ref|ZP_03778779.1| ## NR: gi|225569754|ref|ZP_03778779.1| hypothetical protein CLOHYLEM_05848 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05848 [Clostridium hylemonae DSM 15053] # 1 344 1 344 344 697 100.0 0 MKNKESIKTIICFGLALFSQILFLAGNQKMRQVEDKVWLTRFNSENEITAEMVRRLQREN ERTDAPTAFAAWNEKKNEEVAVQELNKSTFTTAVAVTERADLIFPDSRTFDRAYPNTCII SEGLACSLFGSADVKNLHIVYNEQKYKIQDVIKGSRNLFLYYGNSESAHTFTEITAAGSP DKSQKMIKDQLEERLGVRLRCIDYSFPHFICGAAFLVYVLILCRSLYRHWKRRDKESINV ILLLVLIAAGAVICTQLPGIPRDIVPTHFSDREFWSTLIEEQRNNLEFMFSKEKFYPEKA WFAGLFLAVSGLAASVLSWRKLSTRKALDISVSDYFKRKQREHE >gi|224461045|gb|GG657759.1| GENE 1828 1911945 - 1913321 1493 458 aa, chain - ## HITS:1 COG:no KEGG:Amet_4741 NR:ns ## KEGG: Amet_4741 # Name: not_defined # Def: RND family efflux transporter MFP subunit # Organism: A.metalliredigens # Pathway: not_defined # 7 453 20 444 448 76 23.0 3e-12 MKRKFRKCVVYFFASMLLLTIISRVIDNLCIIKVRTDFARGKEIDKSIEGNGEVRGKNEM LVVTAEGLLVSQVDVMPGEQVKAGDVLYHIDIEDARKMVAQKEDEIKTLQLQSEEVTNQN NRTEKNETVNYGHLAENYEAAVSNRTDNLKRAQQDIDSAYEKQKTGKDKLAEKKQEYDKA VQEGNSQKSEELKALIEQLEEQLDTYETEIGEKERSYGQVVEDQDNIVRAARQELEKAGI GEPENTTAQQNDIAAAQKQKELSQLKEIITDDKITAPKDGVVKEILISAGTRTMNGADMI LADKNEGLEVVASFTEEGKELLREGTMVEIEQRSFPITSVRLADQATQAIEIKIDIPYSD FLIGSQVPVTLTTEAEHYPLVVEREALHLDSEEKYYVFVLKKKETLLGEEWTAAKRNVKV IDKNENYAAIEGVSGSEEIVVESSRYVEDGSRVKKEEQ >gi|224461045|gb|GG657759.1| GENE 1829 1913333 - 1914166 682 277 aa, chain - ## HITS:1 COG:CAC0666 KEGG:ns NR:ns ## COG: CAC0666 COG0395 # Protein_GI_number: 15893954 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Clostridium acetobutylicum # 9 265 15 261 275 139 31.0 5e-33 MRKKLPHFIMLLLIIAMCYPIVFLVTGSFMGEGELIEKIGVIFGAVKGRYTSWSMLPENP NIWSYIKVLFDSPEFFTAFWNTIKIALITLALQCIVNISAAWGLAVYDFPGKKSVLRLYI ILLILPFQVLMLPQYLVMDRLGLTDTIWAVILPMVFSPQFIFILYYFFKKIPDHIIDAAR TEGASEWKIFIYIGLPLCRTGLLAAAVLSAAECFNIIEQPLLFFKTKTLWPLSLYLPNAK MDKVGGNFVAAVLSLLPLVLVYLYGLSCIEEDVTSKK >gi|224461045|gb|GG657759.1| GENE 1830 1914163 - 1915020 649 285 aa, chain - ## HITS:1 COG:CAC0665 KEGG:ns NR:ns ## COG: CAC0665 COG1175 # Protein_GI_number: 15893953 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Clostridium acetobutylicum # 5 277 10 283 289 171 35.0 2e-42 MRYLKKRKRLGILFIIPSFLGVCIFVLLPYMGILLRSFNVTGGNGNPSFVNYEKVLSNSA FRLAVKNTVYFTCVSIPLLIVLSLLIAYFIASRIKNSKWVQTGVLLPMVIPVSTVVILWN AIFHEYGFLNKILQFPPGGGVDWMNDKYAMGVLVLTFLWRNIGFAIVLWIAGISAIPSAM TEAARIDGANGRQRFLYIVCPNLVYYFLCITMLALVNSFKIYREAYLIAGEYPAESIYML QHLFNNWFRDLQVANLSAGAVIQLVITVLALFLLLRVCVRKGLEL >gi|224461045|gb|GG657759.1| GENE 1831 1915038 - 1917173 2065 711 aa, chain - ## HITS:1 COG:no KEGG:Clole_2648 NR:ns ## KEGG: Clole_2648 # Name: not_defined # Def: extracellular solute-binding protein family 1 # Organism: C.lentocellum # Pathway: not_defined # 252 711 333 776 776 102 25.0 6e-20 MVHYKEEQLTLPEGVGIIYDMMETKEGSLSILTDTESETGRIFELDGKANEWKQVNESFE GLSDSAVFDAKFIDENESYVSVLYHALSAGSEEEAQALAPKYFMIGKDGTGKELQLDLSS GDKYAEDNLFSVAVKRDGEMIGIDNAQIIYSFTDKGELNYENKEVRDLDAEVVDMVAVKN IVYTVLDSGKVYCMDADSGAAADGDEGVIKYLQYDEGEYEAYADPDADVIYKLSGGKLYS YDIGSGKQKEELDLKYFDLKNGIRYQILSVKAGELYISYTLSTGQVKLNKYVYDKKGFEI KKQALKIYSLTENYELEVLADAFNVKHPDSPVEIVYGYTSEDGKTQADAVKLLNTELLAG NGPDILIMDGLTAGTYYEEGLLKDITDILDMDKIRKNIFENMLAPYSDGNVQYALPLGFQ IYGIVGSKNMVDAFEDTNAFLDEAEKENTDFAICDLNLSESANIVYIQNISRCFSEEGGL DREKLSELYTNLNRLYKLSGNSLGEERGSKLFEFSELAAMDTEVQWIYYDQLPFIMAPYF NQDSFFASKYLVKQEGYEQGYVHNNDSIVYKDKLIMGVSKQSAKDEEAKEFLEFALNDGQ ETFSQSLLALPVQKKALKKALVNNEKQEPYKISEFGFGDDPKMIAINGIGLNDKDYDELE KELNKAVHFEYGDARLRDTIMGEASNYCLEKKTLAEAVGDAAEKVALYNKE >gi|224461045|gb|GG657759.1| GENE 1832 1917253 - 1917315 82 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLYNRHFYGGEEGSDEKEI >gi|224461045|gb|GG657759.1| GENE 1833 1917488 - 1917856 205 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569759|ref|ZP_03778784.1| ## NR: gi|225569759|ref|ZP_03778784.1| hypothetical protein CLOHYLEM_05853 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05853 [Clostridium hylemonae DSM 15053] # 1 122 1 122 122 200 100.0 3e-50 MQRKKKVFKKLSTVLAIALLVSVFSVPSFAATKTQTRTGVGTNSSAVDATMTFQLNTNGT VSNGKVTKVVKNSSFWFCVYNNHSKSAYRYNSNKNYGAHTSGLWALPGEKGGIVNINVTG FR >gi|224461045|gb|GG657759.1| GENE 1834 1918165 - 1918647 121 160 aa, chain + ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 11 74 7 70 107 62 43.0 4e-10 MKEIKTLGENLKSARQKKQFTQEYVSRQLNISRQAISKWETGKGYPDLDNLVLLSNLYDV SLDELMNNKNKLQKSFRISNSSPCSEELLFAHIEELQLAVILSISCLFPPIGLLAPIGVL IWMKKKKKYYKTIVIFSVFLYVAKLLQLLFHIKYSLSFFQ >gi|224461045|gb|GG657759.1| GENE 1835 1918685 - 1919797 1305 370 aa, chain - ## HITS:1 COG:CAC3237 KEGG:ns NR:ns ## COG: CAC3237 COG3839 # Protein_GI_number: 15896483 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Clostridium acetobutylicum # 1 365 1 365 369 422 57.0 1e-118 MAQIALEHVYKRYEDGSEAVKDFNLCVSDKEFVVFVGPSGCGKSTTLRMIAGLEGITDGV FLMNGKRMNEVEACDRDIAMVFQNYALYPHMTVYDNIAYSLKLRKLSKDNIRHKVEEVAD ILDIRPILQRKPRELSGGQKQRVAMGRAIVREPRVFLMDEPLSNLDAKLRTQMRGEILKL YRSLSTTFIYVTHDQTEAMTLGTRIVVMKDGVIQQIDSPGRLYDSPANKFVAGFIGTPQM NFIEAVCTESGKDVIAKAGQAEGKLPHVRGQWLRENGYIGRKIVLGIRPEDIYDRPEDIV SRNCMKTRQSVRVYEMLGAEAYLYFDFAGSSMAARVEPDTAARRDHMVTWGMDMDKAHIF DPVTELALGV >gi|224461045|gb|GG657759.1| GENE 1836 1919766 - 1920539 739 257 aa, chain - ## HITS:1 COG:mlr5413 KEGG:ns NR:ns ## COG: mlr5413 COG0546 # Protein_GI_number: 13474513 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Mesorhizobium loti # 2 235 7 231 243 94 31.0 2e-19 MIKGILFDKDGTLIDFFDLWEEAARTVIPAFMRENGIEETEKMREYLFRTIGMSGGKVDP KGPLAFEPYEEIASHVKEALAAAGINIPCKVIHRQLVSLFSAYINRPEIQFKPLFHLNHV FRQLKERGIFIGLATADTLASAENCLDTLGVREYFDYVGADDGKQAPKPAPDMLLAFAAQ TGIQPEEIAVVGDTFNDIRFARQCGSVAVGVLSGVSTRADYYREADYIFETASDVVKLCG EEGRRDRYGADSIRACV >gi|224461045|gb|GG657759.1| GENE 1837 1920517 - 1922049 916 510 aa, chain - ## HITS:1 COG:no KEGG:BcerKBAB4_2798 NR:ns ## KEGG: BcerKBAB4_2798 # Name: not_defined # Def: hypothetical protein # Organism: B.weihenstephanensis # Pathway: not_defined # 46 496 46 469 475 197 29.0 9e-49 MDKSFTFEINKHTEPMFGESFWIPQSLERLYIEVGTEEDCGPAGYIILKDEGGHIRLQKL IGYGSPLICIGRGPCDTSIGGVPGSVGAGRWELIIYIFTEYVKQRPGDGACTLTVRLADM AEGDAPRPDYTGRHCWVSGRGDGELFHDMYDWNKVFRRERRWYKGDFHTHTCLSDGRETV ENAMKKAADMDLDFYVPTEHNVIHTGWVETEVMAVPGIEVTTEQGHCNLFGIDRMPEALP RILAHMGGTHTGAYMKEVWEEARKRGWGISINHPFLHIWKWKYEETPLGQIDFLEIVNDP TYTYAGKSNWKAIRFLDWLWQDGYKIYGIGGSDSHNLITEYYEGAREPSVAGDPGTYVFT EELSPENMLRAMKKGHVYVSRHCSLKLNICAGGVSYLPGDEIVCEQHTEVRYCVKITGLG EEPQVYMVMNRVRFRIELVRSGPDVYEGEAQIGLEPDFWHWARLDVRDSRGEFAAYVNPI YSGKKEHRLKTFKEAVHYMEEEEHDQGNII >gi|224461045|gb|GG657759.1| GENE 1838 1922055 - 1923353 1389 432 aa, chain - ## HITS:1 COG:VC1549 KEGG:ns NR:ns ## COG: VC1549 COG1653 # Protein_GI_number: 15641557 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Vibrio cholerae # 38 379 26 373 434 106 28.0 1e-22 MKMKKLISMALVISVTAALAAGCGSTDKASAAEDGKTTEIDFWYSGGKTAVNVFQGIVDA YNESQSEYHINTVTQADYTETYEKLQAGIAGKKAPDIALLDVDKARNLSRKGLTEDISSY IKDDDTFDESDYLPVFFDQGKDEDGKLFALPAYGTTQVMYYNVQAFEDAGIDPDTIKTWQ DLEAAAKKMSGGESFYGWEPMWGKDNLVDASLSNGGKILSDDGKKVLINSEEWVEVWESF RQWIHDDKIMRIHSGGQGWEYWYSTIDDVLQNKAGGYTGSSGDQADLDFSIVQAMEQPGW GSNPSAPTADALQLIMLKDSTDKEKQGVYDFMKYFTEPEQQAEWSMETGYVPVRQSTQDV DKYKSYTEENPQALVPFSQAQHGSILPEDPTGGKIFDALSVAADQVEIEGKPAKEALDQA QKTAQAALDSVE >gi|224461045|gb|GG657759.1| GENE 1839 1923407 - 1924315 776 302 aa, chain - ## HITS:1 COG:lin0219 KEGG:ns NR:ns ## COG: lin0219 COG0395 # Protein_GI_number: 16799296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 39 301 22 281 282 176 38.0 5e-44 MNEQNILEKYDRQGGAQVHQIPLSFKAAKAVRGAGKTAVLFTAGVFTIFPFLWMVLSALK TKAEVMDVTQFFPASPQWQNFRSVLFESPLLRYIGNSLFVSTATVGLQLVTGAMITYAMV FMTFRGRKALFALIMGTYMLPTAATYIPSYIILADWNMLNTYRGLIISSMVSIFGIFLLR QAFMQVPAGMIEAARIDGASHWQILWKIVAPMTKSSFITFILMSFITCYNNYMWPSLITD SPELSLVSQGLRRFFIEGGAYGTEWPLVMAGSTLIVVPLLILFGFTQKWFINGIGGDTGM KG >gi|224461045|gb|GG657759.1| GENE 1840 1924331 - 1925203 952 290 aa, chain - ## HITS:1 COG:lin0218 KEGG:ns NR:ns ## COG: lin0218 COG1175 # Protein_GI_number: 16799295 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 1 290 4 292 292 204 38.0 2e-52 MQKMKNRSSVLLFVLPALVPLAIFWIYPILKSLLISFTNWDYMSPDYQFVFFDNFIKLFT DTRFYQALGNTVVFTLGTLIPTIAGGLILALLLQKYFRGSGIVKFILFSPWITPTVAVSI VWTWIFQPDTGIANALLRFLGLPGLQWIQSSDTAMLSVILVTVWKSLGYAMIFYLSALEK VPGELYEACGLDGAKRWQRFRDITVPCISPTTFFLTIITMINSLQAYDQIQILTQGGPSG STRTLLYMYYQLGFEEFDMGQATAVAMVLILITVALSVFQFQASKRWVHY >gi|224461045|gb|GG657759.1| GENE 1841 1925232 - 1926557 916 441 aa, chain - ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 12 420 18 431 448 168 28.0 2e-41 MDKNALRKNWAKDCLPAVFALLLSGLYSIVDGLFIGRAVGDAGLAAVNIAWPLPAFVTAV GVGSGMGGSILYSNCRGMGEGEKSSKIYGQTVTLLIVEGLFITGVLYCLYPQMLRILGAS GDVSVKAGDYSEVIILGAVFQTVGTGIIPILRNRGRALGAVAGMSAGMLVNLVLNYILIF RFGLGVRGAALGTVAAQLVTALTGFFLIYGKGEEPLKLTLDRKTAVHILRTGASAFGLSL APSLILVFTNQRCLQYGGGAAVACYAVISYITFPVQYILTGIGDGSQPLMSYYCGGDRME ELAYIRSTGERFAAAAGLLLALLVYAVKPVIPDVFGLSKRSAAYFDTGMTVSSTAFFVMG PVKFHIAYMNSVLRIKDASRLIYGETLIAMPVLLFILPEIWGINGVWAAFPAGQLVMLLI FNICFTRRKSRLNTAVVRCGR >gi|224461045|gb|GG657759.1| GENE 1842 1926792 - 1927841 1295 349 aa, chain - ## HITS:1 COG:CAC2788 KEGG:ns NR:ns ## COG: CAC2788 COG0006 # Protein_GI_number: 15896043 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Clostridium acetobutylicum # 1 346 13 357 358 320 46.0 3e-87 MEENGVPQMIISDPVAIFYLTGAWIHPGERLLALYLNVNGNHKMMINKLFPQEKDLGVDI VWYDDIEDGVEIMSRFVEKDKVMGIDKTWPAKFLIRLQELGGGSKFVNGSPIVDYIRMIK DEGEQELMRESSRLNDIAMEKLIPWVSKGLTERELNAKIREIYKELGCGDVSFDPITAYA KGAADPHHVTDDSKGKRGDCVVLDIGAFKDNYASDMTRTVFIGEVSDRAKEIYDIVVEAN RRGIEAAKPGNRMCDVDLAARNYIEEKGFGQYFTHRTGHSIGLEDHEFGDVSSVNEDIIK VGQCFSVEPGIYIQEEGIGVRIEDLVIITEDGCEVLNHFTKDLIVVPEE >gi|224461045|gb|GG657759.1| GENE 1843 1927981 - 1928163 219 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569769|ref|ZP_03778794.1| ## NR: gi|225569769|ref|ZP_03778794.1| hypothetical protein CLOHYLEM_05863 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05863 [Clostridium hylemonae DSM 15053] # 1 60 1 60 60 63 100.0 7e-09 MALAAISSVVSTAAVGLIVLGIVALIVRSMWKKKKAGGSCGCGCSGCAHSCGMKSADERK >gi|224461045|gb|GG657759.1| GENE 1844 1928184 - 1930373 2814 729 aa, chain - ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 5 710 4 702 709 726 50.0 0 MGIKIALAGNPNSGKTTLFNALTGSNQFVGNWPGVTVEKKEGKLKSNKEAVIMDLPGIYS LSPYTLEEVVARNYLITERPDAILNIVDGTNLERNLYLTTQLMELGIPVVMAVNMMDVVK KSGDVIDTRKLGEKLGCTVVAVSALKGEGIEEAAGKAVKAAQAKQAVAPVHEFSQEVEAV LDEIETMLDGDIPEEQKRFYAVKLFERDDKIAEQMKHAPDVSAVIEKAEKDMDDDSESII TNERYNYITSIIGESLKKANKEKLTTSDKIDRVVTNRWLALPIFAVVMWLVYYVSVSTVG TWATDWANDGVFGEGWKLFGLVDVPGIPVIVENGLSVVNCAPWLQSLILDGIIAGVGAVL GFVPQMLVLFIFLAFLEACGYMARVAFIMDRIFRKFGLSGKSFIPMLIGTGCGVPGIMAS RTIENDRDRKMTIMTTTFIPCGAKLPIIALIAGALFGGASWVAPSAYFVGIAAIICSGII LKKTKMFAGDPAPFVMELPAYHMPTVSNVLRSMWERGWSFIKKAGTIILLSTIFIWFTSS FGFVDGHFGMVEDLSDGLLASIGRGLAWLFVPLGWGDWKSAVAAITGLVAKENVVGTFGI LYGFAEVAENGAEVWGTLAASMTAVAAYSFLVFNLLCAPCFAAMGAIKREMNNAKWFWFA IGYQTILAYAVSLCVYQFGSLFTGGGFGIGTAAAVIVLIGFLYLLFRPYKESSSLKVNVS SVNARRAKA >gi|224461045|gb|GG657759.1| GENE 1845 1930424 - 1930645 281 73 aa, chain - ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 4 72 80 148 152 69 50.0 1e-12 MRTLRNIGCNQSVSVVKLHGEGAVKRRIMDMGITKGTEVFVRKVAPLGDPVEVTVRGYEL SLRKADAEMIEVN >gi|224461045|gb|GG657759.1| GENE 1846 1930660 - 1930869 293 69 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00572 NR:ns ## KEGG: EUBELI_00572 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 69 15 83 83 73 56.0 4e-12 MPLTMLGSGETASIKRVGGQNEVKKFLESLGFVTGEEVKVVSENGGSIIVQVKESRVAVS RGIANKIMV >gi|224461045|gb|GG657759.1| GENE 1847 1930894 - 1931136 356 80 aa, chain - ## HITS:1 COG:CAC1682 KEGG:ns NR:ns ## COG: CAC1682 COG0735 # Protein_GI_number: 15894959 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 7 74 9 78 151 57 42.0 9e-09 MNQEERLQEITNRLKENGYRITSQRKMLLEVILSNEHSSCKEIYFAAKQIDNRLGIATVY RTVQLLEDLDLIRKEMAVQI >gi|224461045|gb|GG657759.1| GENE 1848 1931317 - 1934949 4059 1210 aa, chain - ## HITS:1 COG:CAC3142 KEGG:ns NR:ns ## COG: CAC3142 COG0086 # Protein_GI_number: 15896391 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Clostridium acetobutylicum # 15 1195 6 1178 1182 1641 68.0 0 MPVNSNEQSYQPMTFDAIKIGLASPEKILDWSRGEVTKPETINYRTLKPEKDGLFCEKIF GPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKASVRRERMGHIALAAPVSHIWYFKGIPS RMGLILDLSPRTLEKVLYFASYIVLDKGETDLQYKQVLSEQEYQEARESWGSSFRVGMGA EAIKELLEAIDLDKEYEELQSGLEGATGQKRARIVKRLEVVEAFRESGNKPEWMIMTAIP VIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEAV DALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQNLLGKRVDYSGRSVIVVGPELKI YQCGLPKEMAIELFKPFVMKELVQNGTAHNIKNAKKMVERLQPEVWDVLEDVIKEHPVML NRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHLPLSVEAQAECRFL LLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGAKGEGKVFKSVNEAILAYENNALT LHSRIKVRMSKVMHGGEVKTETIESTLGRFIFNEIIPQDLGFVDREAEGNELLLEVDFHV GKKQLKQILEKVINTHGATATAEVLDAIKSTGYKYSTRAAMTVSISDMTVPPQKPEMIEQ AQDTVDKITKNYKRGLITEEERYKEVVETWKATDDALTEALLSGLDKYNNIFMMADSGAR GSDKQIKQLAGMRGLMADTTGRTIELPIKSNFREGLDVLEYFMSAHGARKGLSDTALRTA DSGYLTRRLVDVSQELIIHEVDCAKKGAEIPGMYVKAFMDGNEEIESLQERITGRYLCEN IVDKDGNILVKANHMVTPKRAELIIRKGVDEKGGPLKKIKIRTILSCKSHSGVCAKCYGA NMATGEPVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKP KGLAIITEFAGTASINDTKKKREIIVTNNETGESKAYLIPYGSRIKIQDGAELEAGDELT EGSVNPHDILKIKGLRAVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQMLKKVRIEEAGD TEFLPGTTVDILDFEDVNEKLAEEGKEPATGEQIMLGITKASLATNSFLSAASFQETTKV LTEAAIKGKVDPLIGLKENVIIGKHIPAGTGMRKYRDVRLDTEFTMNDELMFDEEPEAEA EAEEFVEVEE >gi|224461045|gb|GG657759.1| GENE 1849 1934964 - 1938827 4090 1287 aa, chain - ## HITS:1 COG:CAC3143 KEGG:ns NR:ns ## COG: CAC3143 COG0085 # Protein_GI_number: 15896392 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Clostridium acetobutylicum # 6 1273 2 1221 1241 1590 64.0 0 MEKNRIRPIKSGKSSRMSYSRQKEVLQMPNLIEVQKDSYQWFLDEGLKEVFDDISPIADY SGHLSLEFVDFTLCEDDVKYTIEECKERDATYAAPLKVRVRLHNKETDEINEHEIFMGDL PLMTSTGTFVINGAERVIVSQLVRSPGIYYAIAHDKVGKKLYSSTVIPNRGAWLEYETDS NDVFYVRVDRTRKVPITVLVRALGIGTNPEIVDLFGEEPKILASFEKDAATNYQEGLLEL YKKIRPGEPLAVDSAESLITSMFFDPRRYDLAKVGRYKFNKKLALKNRITGQVLAEDVKS ALTGEVVAEKGTKVTRETADAIQNAAAPFVWIERPDEERNIKVLSNMMVDLASVVDIDPK EVGVTELVYYPVLETLLEETAGDIDELKDAIKRDIHDLIPKHITKEDILASINYNIHLEY GLGNDDDIDHLGNRRIRAVGELLQNQYRIGLSRLERVVRERMTTQDLEGISPQSLINIKP VTAAVKEFFGSSQLSQFMDQNNPLGELTHKRRLSALGPGGLSRDRAGFEVRDVHYSHYGR MCPIETPEGPNIGLINSLATYARINQYGFVEAPYREISHEDPDNPVVTDKVVYMTADEED NYHVAQANEPLDDEGHFVHKNVSGRYREETQEYERTRFDYMDVSPKMVFSVATALIPFLE NDDANRALMGSNMQRQAVPLLMTEAPVVGTGMEEKAAVDSGVCMVAEAGGVVERSTSNEI TIRQDDNSLKRYKLTKFLRSNQSNCYNQRPIVFKGDRVEAGDVIADGPSTSNGEMALGKN PLIGFMTWEGYNYEDAVLLSERLVQDDVYTSVHIEEYEAEARDTKLGPEEITRDIPGVGD DALKNLDERGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLK VPHGEYGIVVDAKVFTRENGDELSPGVNQAVRIYIAQKRKISVGDKMAGRHGNKGVVSRV LPVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNIATPVFDGANEI DIMDTLDLANDYVNLSWEEFEKKHKEDLLPEVLQYLSDNREHRKLWKGVPISRDGKVRLR DGRSGEFFDSPVTIGHMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEM EVWALEAYGASYTLQEILTVKSDDVIGRVKTYEAIIKGENIPEPGIPESFKVLLKELQSL GLDVRVLRDDNTEVEIMETVDMGETDFHSLIEGDRNYREEDNLGAKGYTEQEFQGEELVD VEEEAEEDDFDVEFEETEEFAMELDEE >gi|224461045|gb|GG657759.1| GENE 1850 1939030 - 1940052 894 340 aa, chain - ## HITS:1 COG:CAC3628 KEGG:ns NR:ns ## COG: CAC3628 COG4608 # Protein_GI_number: 15896862 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Clostridium acetobutylicum # 5 318 10 322 322 425 65.0 1e-119 MEERLLEVRHLKKYFKTGKNGILKAVDDVSFCIRKGETLGIVGESGCGKTTCARTCMGIY DATEGEVLYKGRNVSGLRGKERQRFTKEVQMIFQDPYASLDPRMKVRDIIAEGMLAHKMA DSGRQCADRIKELLTTVGLLAGHMDRYVHEFSGGQRQRIGIARALAVEPELLVCDEPISA LDVSIQAQIVNLLIKLQKERGLTYMFIAHDLSMVKYISDRTAVMYLGKIVETAGADVLCR NPKHPYTQALLSAVPIPDPEAEAGKKRIPLEGELPSPIGPGSGCPFFGRCPRAMELCRYE EPKLREVEKGHFTACHLYKEESDSAGPVPGGAGLRSGNVG >gi|224461045|gb|GG657759.1| GENE 1851 1940076 - 1941068 600 330 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 4 321 11 327 329 235 40 6e-60 MSKLLEVENLRVSYHSYAGEVQAVRGVSFTADEGGTLAVVGESGCGKSVTARSIMGLIQT PPGEIKADSHIWYKGKDILDYTEKEWRAYRGAECSIIFQDALAALNPTMKIGRQIAENVL LHGSADRKQAWTEAENMLGMVGIPEPGKRMHQYPHEFSGGMRQRVMIAAALVCGPKIVIA DEPTTALDVTIQADIIQLLKKLQSERNTTVLLITHDLGIVADMADKIIVMYAGEVVEEGT ASDIFYHPGHPYTKALLKAVPRLDMGEQELTPVEGAPPDSIHPPEGCPFYERCESAMCLC GHRNPPAYTLGRGHRASCWLYHPMAQSRRE >gi|224461045|gb|GG657759.1| GENE 1852 1941079 - 1942014 952 311 aa, chain - ## HITS:1 COG:lin0184 KEGG:ns NR:ns ## COG: lin0184 COG1173 # Protein_GI_number: 16799261 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Listeria innocua # 41 305 30 293 297 258 50.0 8e-69 MDKSMVQNGEAVFTEEDFRPAPKERGRKDDFRSRNSFYGIKYLLKENRLASVCIAALLLI LLSAVLAPLSPYDPDALDIQNALQGPGPGHLLGTDDLGRDTLTRALYGGRVSLAVGFAAM AVSVLAGTLLGTVSGYVGGNTDTVLMRIVDIFLSIPNLLFIIVIYAFIQPSLPVLVLMLA FFSWTSVARVVRAETLSLKQRDFVIAAKCLGVSDVRIIMRHIIPNMSSQIIVSASISIAR AILDESALSFLGYGVQLPMSSWGSMLQNAQKYILHEPLLAVVPGVLILVTVLCFNILGDM LQHALDPKLTK >gi|224461045|gb|GG657759.1| GENE 1853 1942007 - 1942954 925 315 aa, chain - ## HITS:1 COG:lin0183 KEGG:ns NR:ns ## COG: lin0183 COG0601 # Protein_GI_number: 16799260 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Listeria innocua # 4 307 15 313 316 279 49.0 4e-75 MALVFVLVSMFAFAIIYFAPGDPLYMYTSPGKSSFKMSEEQLNTLREDLGLTGNVVHQYV SWAGKTLTGDWGISLNNFLPVRPQILERLPGTAGLMGAALLLSLVLAIPLGLAAGTHKNK WIDNIISGFSYVGISLPSFWFALLLIIVFSLRLGLFPSSGMRTMGVNSAADVIWHGALPA VVLAFNNMAVFVRYIRSNTISQLEEEYVMTAASKGASKQWILRRHVLKNCLLPVITITGM NFGTLITGSFIVESVFGWPGLGTLCMTAINNRDYPMIMGIIMLSCTILLIGNFLADILYG IADPRIKRGNEVRHG >gi|224461045|gb|GG657759.1| GENE 1854 1942994 - 1944562 1868 522 aa, chain - ## HITS:1 COG:lin0182 KEGG:ns NR:ns ## COG: lin0182 COG0747 # Protein_GI_number: 16799259 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Listeria innocua # 12 519 10 520 524 266 33.0 6e-71 MKKRSWSGLLCLAMAAVMLAGCGGREKAGTSEPDKKTSGKNELVMGVSSSVTNLNKHLET MKEGWLMLGAVYDELYMKTDSETRYYLADSVELSDDGKTVTLKLKEDLKWHDGEPITADD VIFSLDVNADPDNGAGYANAVYIGDRPVSYKKADDLTVEITLPEPSASYVTILGTLPLLP AHVYGNDTDIKANSEANLKGIGSGPYKVKEFKNGECLELERFDDYYGDRPAIDKVVYKVI PDTSAQEVALQKGEINFMEVSSQAAADMYEGDKDITVHTFPEGRVNYLACNKFSDTFSDP KVKEAIYAALDGEEIVKGAYGADMGTAANTIFSNATQYHDKDIKGYEQDTGKAEKLVKET GLDGKTLKLVYNQDRAFMKETALIVQQQLKDVGIRLEVEGMESNGFFDRVFGDASDYDLY FNGYGAFGDPDEVISGMFDGTWGINLEVSEDQLDLWKQGRSAADDKERAGIYKELQEKAV EDMSIYPIAYPNYVFATSSSLEGADELQTNPVFEDYTKLSFK >gi|224461045|gb|GG657759.1| GENE 1855 1945007 - 1946239 715 410 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 1 217 51 267 301 232 53.0 1e-60 MDDGYSGTNFDRPAYQEMMELVEDGMVEAIIVKDHSRLGRNRLVIGQLLEEILDEHNVRY IAVTDNIDSLKGLDDMVAVRDLFNEWYARDTSKKIRAVWRAKSSAGKRLCNNPPYGYRKD PEDKERWLVDEEAAKIVREIFSLCIAGVGPLQIAKRLRKEQVLNPTAYWEAHGLIVGNPT PADPYHWDNKAVAAILERMEYLGHTVNFKGTKKSYKSNTGTCSAHFIRAVVLEKLVLEHL QRTVQYVREYESEFVQSMGEKSAADRRKEISEKRRGLSQSQRRMEELDRLFQRLYEDNVA GKISDERFAKLSGGYEAEQKDLQEKVAILQAELTGQEEQAMNLDRFLAIVKKYTEIEKLP PTILNEFVEKIIVHAPDKSTGKRVQQVEISYNCVGMIELPDTNETNSKTA >gi|224461045|gb|GG657759.1| GENE 1856 1946579 - 1947262 275 227 aa, chain - ## HITS:1 COG:no KEGG:ELI_1000 NR:ns ## KEGG: ELI_1000 # Name: not_defined # Def: plasmid recombination protein # Organism: E.limosum # Pathway: not_defined # 74 227 160 313 313 239 82.0 5e-62 MKKKLQPIERGPGGSLPRMTAAQRKRANALIRNTCCNYDNGNCLLLDDGDNCTCPQTISY SVCCIWFRRAVLPQDDFHAYMVEKYPDLERGESASKTGRKHIPTRLFKQAVSPSKQAGAI EAALDGINPLNAGKEKEDALSMLKKWFPLMENFSGQLKKYKATITDLLEENKKLEARAKA SEKGKLKDTMERAKLESELHNIHRVLDRIPPEALAELKRQQHDRKER >gi|224461045|gb|GG657759.1| GENE 1857 1947633 - 1948046 152 137 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_0527 NR:ns ## KEGG: CDR20291_0527 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 137 1 137 137 194 82.0 1e-48 MKMPTEKIDTAMFAPCGMNCLLCYKHCYHKKPCAGCLNSDMGKPEHCRKCKIKDCIKGKG LAYCFECPDYPCKLIKNLEKSYNKRYQASLMENSEFVRQHGLERFMEQQKGKYTCPKCGG IISIHDRECSECQESMK >gi|224461045|gb|GG657759.1| GENE 1858 1948068 - 1948274 264 68 aa, chain + ## HITS:1 COG:no KEGG:Tresu_1922 NR:ns ## KEGG: Tresu_1922 # Name: not_defined # Def: helix-turn-helix domain protein # Organism: T.succinifaciens # Pathway: not_defined # 1 68 1 68 266 120 91.0 2e-26 MALTIQERLKDLRVERGLTLGQLAEQTHLSKSALGSYEADDFKDISHYALIRLAKFYGVT ADYLLGLA >gi|224461045|gb|GG657759.1| GENE 1859 1948326 - 1948871 303 181 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1780 NR:ns ## KEGG: CDR20291_1780 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 180 89 268 268 193 55.0 3e-48 MIDLLKSERIDTALLCELAVHPDFVKLLADIQIYVEGIAATQIQNLNAWVDVARAEIMEK YQPGEHDKTAGVLQAAHVREGDYFSSRVHHDIDAIMGDIREAHRGRSDSAPENTIVDELK RDLEEVASFKGSRAEQLLMVFCKQTKLRYNKLTEEEKQWLTRIVQKSELAKSYVPQRGKR K >gi|224461045|gb|GG657759.1| GENE 1860 1948916 - 1949473 210 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229879086|ref|ZP_04498585.1| acetyltransferase, ribosomal protein N-acetylase [Slackia heliotrinireducens DSM 20476] # 10 184 2 173 177 85 28 1e-14 MAELFETFPYLRNDHIIIRKMVEDDVDDLMEITNNPNVYQYVPPFLYKKSRGNLLAAIRN LGGRDFDKKKLIIAGIYLCDEPNKLIGLAELFDYKKRMNQITIGYRINESYWHRGIATDT VRLIMDYLCNDLGIQKLKAFVMPENVFSEKALTKNSFLKEPNTVQEKNWGGKEIVDLNVF TYAVL >gi|224461045|gb|GG657759.1| GENE 1861 1949584 - 1950078 226 164 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229236536|ref|ZP_04360958.1| acetyltransferase, ribosomal protein N-acetylase [Chitinophaga pinensis DSM 2588] # 3 157 4 163 174 91 32 1e-16 MILSTERLELVPLLPYQLRLWVEDIPKLEKDLKCSYQAEPMEGLFLEIVKGQLEKTEKNP NDFLWHSFWLLIRKSDRVVVGSADFKDTPNTDQEVEIGYGLGKDFERNGYMTEAVQAMCK WALEQENVSHVIAETDIDGFASQRILKRCGFIEKGQEKTIWWQL >gi|224461045|gb|GG657759.1| GENE 1862 1950151 - 1950237 57 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLALWIAIGTAILCAGVAIYYGTKKKK >gi|224461045|gb|GG657759.1| GENE 1863 1950897 - 1951589 1037 230 aa, chain - ## HITS:1 COG:PA4034 KEGG:ns NR:ns ## COG: PA4034 COG0580 # Protein_GI_number: 15599229 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Pseudomonas aeruginosa # 1 230 1 229 229 157 46.0 1e-38 MKKYVAEFIGTAVLTLFGCGSAAVSGGIDGTLGILGIAMAFGLSIVAMAYVIGDVSGCHI NPAVSLGVFLNKGMSAADFAGYLVAQFLGGIAGAGILYGVISCTGLGPVWETGLGQNGFA EASYTGLSMPGAILVEVILTFVFVFTILGVTAKAENSRAAGIVIGLTLAFVHILGIPLTG TSVNPARSLGPALLVGNGTALSQVWVFIAAPLLGAVIAAVVYRTVCKREE >gi|224461045|gb|GG657759.1| GENE 1864 1951708 - 1954767 3106 1019 aa, chain - ## HITS:1 COG:BH2666 KEGG:ns NR:ns ## COG: BH2666 COG0668 # Protein_GI_number: 15615229 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Bacillus halodurans # 734 980 18 272 276 117 30.0 9e-26 MSEKLKRKALLAVGAEIICLVLLGLFLLSMQTDLSVNDQKKNTEDKVHEMSSLLKSAGEA ADQITVSFDDIYRSKADSLSYMYQRQTADEYTDGRLEEYRSLLEVTNVLVVDSRGNKVAL AQESPADFTRSRYNQLRTVFDTGEASEAFEVRNKETSLRYYGSRIDDDRMVVIEQDPEEL YKLLEETSTWKSILGNVSVGLEGYAFAVSEKDYTFLYHPDEKLSGTDALDAGIPVEELED NNYTWLTVNGEKFYCGITKQQDAYIICAVSEKEIISSRGVTVAGILFAFFAVMTLVITYS IFMMKDREKSGKKEAGSSAWGKFCYDRVIGRKIGTISVVGLIFILIITFYMQTLFALSRQ SMGNNERVAEVEKTLKHYEKDIDETTEQYNARYLNKGRIASYIISQDPGVAQKDALVELS KALDVEAVNVFDMAGVQTATSSPYTNFKLSGDPEDQSYEFNKLLNGADYIIQDAQTDEVS GGYHQYIGVTLRDDRGDADGFVQISVTPSKLKETLSNMQIDKVLEKTKVGKGGFVFAVDK KDKTFAYYPKEKLTGRSAVSYGMQKQQFKDAYCDYITVDNKTYYGSSLETKSDYIYVVVP KDAMTGARLPITLACGAVSFICLLFVFLLLTLSRSGREEADAVKDGAGRRNIDVVMPDGS VRKTETAESRWETVSIRWNEKTPEQQISTVLKMILGVLAAAICMAVMMKEKIFGSNSIFL YILNGEWERGVNIFALTGCILIICVVSVITVLVQAILRMLSKTFGARGETVCRLLHSFIK YFSVIAILYYCLALIGVDTKTLLASAGILTLVVGLGARTLVSDILAGLFIIFEGEFRVGD IVTIGDWRGTVLEIGIRTTKIEDPSKNIKIISNSEVSGVINMTRQYSYSWADVGIEYGES LERVENILEKEFPNIRKRLTNIIEGPFYKGVIELGESSVVIRVMVLCTESDRVQMGRDLN REMKLIFDKYDINIPFPQVVVNEPTEAKKASEWEKRRADKFNRSQKELSKSFIAEEEEN >gi|224461045|gb|GG657759.1| GENE 1865 1954779 - 1955576 941 265 aa, chain - ## HITS:1 COG:SP0609 KEGG:ns NR:ns ## COG: SP0609 COG0834 # Protein_GI_number: 15900517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 27 264 23 244 254 114 29.0 2e-25 MKMRRLSALLCGLLTLAAVLTGCGGREKSGTLRVGVRDDIMNFGYLNKETGRYYGMEIDL ANKLAEKLGYEEVEFVTVQPDNRKEMLQEGKVDCLVAAYSIADTRKENFDFSPPYYTDET VIMAEKSALFHSADDLKDQTVGIVSGSNAGPLLAQKLYDLGIITDKVVSNTDTATVYEGA GVVKTAKYSDLDTALETGAVDAVCMDKCIAGTYMNENREFLDVVVAEQQYGVATRKDSDL SGPVADAVQKMLDDGTVERLIDKWD >gi|224461045|gb|GG657759.1| GENE 1866 1955847 - 1959218 1862 1123 aa, chain - ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 251 883 701 1355 1734 254 32.0 8e-67 MGEKRKERILALLLSTAVLLGMTMPLAARAETPAAPSEGQIQSFLALPDNSTEREVPQGT AWEELNLPGELEAMVFRVQEEPAENGGETPAPSAENVPVMWESGPAYDSEKPGEYILTPK PGEGYTVPKEVSLPRITVRVKEAQTNSSLKSAPALQTVSAGTALTVEVTGNGTDAVKNAV EAELGGGNKADYTAITLTGSASELTDGNWNYIRALYAEDSEWNSLTTLDLSGMSRLSKVE TLNSQRSPAKLIAVTFPSSLKTIGMDAFYGSTGLTEVTFPSSLETIGVNAFLSCGSLKET AFPNNLKSIEAYAFSGCFSLRSVTFSSSLETIGSCAFSDCISLTEVTFPSKLKTIVKNAF SGCTSLTAFAVVSENPYFTGKAGVLYDKKMETLLLYPQGKTDMSFTIPDGVVTIGNAAFG SQPSLESVTFPSSLKTIEGYAFGNCTGLTEVTFPNNLESIGGNAFYNCLCLTEVTFSKNL TSIGSSAFHSCESLATLTFTGSTPPNIGPAAFNNIAGGGRLYYPSDAPSYDAAWISGLNL PTGGGWSSGVYNLVVEVDNDAPGEVADKVTTALGGGNKADYTAITLTGDATELTGDNWDY LRSLYIPGNDWTNLTTLDLSGMDGLIKVAGSASNNIGRLTTVIFPDKLKTIGSNAFYSCG SLKNAVFPDGLRSIGGSAFGGCGSLAGAVFPDSLQTIGVQAFSNCPSLTEVTFPKNLETV GAQAFSNCTSLMSFAVADGNGYFSSENGVLYDKKMETLLIYPIGNADTSFVLPDGVRTIK GFAFWSCLSLTKVIFPDSLETIEDAAFYNCGGLASLTFLGDRPPKAIGGGALYFIAGSGT IYYPAGKESNYNDTWKSGLSTPVDSNTWTLVPGYRLTVAGGTDTTKGGLYQENDSVSLMT APSAGRKFDRWTSSGGGAFANAEEASTTFTMPAAHVTVTAHFTPSYSERTLRDPSTGVTV RGSFTEDAMLNVKSGTLHTGDDDSACATIRAYGKDNGGPLLLYDISLSAGEVQGEVDVTI PAGTGYNGRTATVMHCHRRELERIKVPVENGAVTGTFGGLSPFAVFVPGGDGRGNSRSTG SGVQTGDPLDPIAAVLVMLASLTVCALLIFLRKRHRTKCHNVR >gi|224461045|gb|GG657759.1| GENE 1867 1959724 - 1960416 985 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238916246|ref|YP_002929763.1| large subunit ribosomal protein L1 [Eubacterium eligens ATCC 27750] # 1 230 1 230 231 384 81 1e-104 MKRGKKYIEAAKVIDRGNLYDKEEAVSLVKKTAVAKFDETIEAHIRTGCDGRHADQQIRG AVVLPHGTGKKTRILVFAKDAKAEEAKAAGADYVGADELIPKIQNENWFEFDVVVATPDM MGVVGRLGRVLGPKGLMPNPKAGTVTMDVAKAVQEIKAGKIEYRLDKTNIIHVPVGKASF TEEQLADNFQTLIDAINKAKPAAVKGQFLKSVTLTSTMGPGVKINPAKLV >gi|224461045|gb|GG657759.1| GENE 1868 1960499 - 1960924 647 141 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240143818|ref|ZP_04742419.1| ribosomal protein L11 [Roseburia intestinalis L1-82] # 1 141 1 141 141 253 90 2e-65 MAKKVEGYIKLQIPAGKATPAPPVGPALGQHGVNIVEFTKQFNAKTADQGDMIIPVVITV YNDRSFSFITKTPPAAVLIKKACNIKSGSGVPNKTKVATITKAQLQEIAELKMPDLNAAT VEAAMSMIAGTCRSMGVKVEE >gi|224461045|gb|GG657759.1| GENE 1869 1960981 - 1961496 601 171 aa, chain - ## HITS:1 COG:CAC3149 KEGG:ns NR:ns ## COG: CAC3149 COG0250 # Protein_GI_number: 15896397 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Clostridium acetobutylicum # 1 171 1 172 173 205 60.0 3e-53 MSEAKWYVVHTYSGYENKVKANIDKTIENRHLEDQILEVRVPMQDVVELKNGVQKATQKK MFPGYVLIHMIMNDDTWYVVRNTRGVTGFVGPGSKPVPLTDAEMAPLGIRQENIVVDFEV GDTVQVIAGAWADTVGVIQALNIPKQSLTINVELFGRETPVEISFAEVKKM >gi|224461045|gb|GG657759.1| GENE 1870 1961530 - 1961724 187 64 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0372 NR:ns ## KEGG: EUBREC_0372 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: Protein export [PATH:ere03060]; Bacterial secretion system [PATH:ere03070] # 4 63 8 67 71 70 60.0 2e-11 MAEQKTQKKSWFKGLKAEFRKIIWPDKMTLAKQTAAVVSVSVVLGLIIAVIDFLVQNGVD LLVR >gi|224461045|gb|GG657759.1| GENE 1871 1961746 - 1961895 236 49 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|160881814|ref|YP_001560782.1| ribosomal protein L33 [Clostridium phytofermentans ISDg] # 1 49 1 49 49 95 81 1e-17 MRTRITLECTECKQRNYNMTKDKKTHPERMETKKYCKFCKSHTLHKETK >gi|224461045|gb|GG657759.1| GENE 1872 1962089 - 1962829 799 246 aa, chain - ## HITS:1 COG:MK0426 KEGG:ns NR:ns ## COG: MK0426 COG2159 # Protein_GI_number: 20093864 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Methanopyrus kandleri AV19 # 1 245 1 240 243 111 30.0 1e-24 MIIDFHTYVGTSMLGQESTEDELLQNMAENQVDISVICPVKTTDPFFERQNEYVSDLQRK HAGKLAGFCRIDPNLGKDSEKILRESVQELELKGLVLHPWEETFAINDKKVYPFMEICRE YGLPVLVETGYPWLSHCFQVADLAERFPEITFIMSHGGQFDSSGYALTDVDHVMDRHSNL MIETSGDYSDEGIENIPERLGYDRLVFGSHFPWLNTELEIYRIQRADLTDEARESIFYKN ALRLLK >gi|224461045|gb|GG657759.1| GENE 1873 1962826 - 1963575 762 249 aa, chain - ## HITS:1 COG:PAB0058 KEGG:ns NR:ns ## COG: PAB0058 COG2159 # Protein_GI_number: 14520316 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Pyrococcus abyssi # 4 239 17 239 248 118 33.0 1e-26 MRIIDMHAHVDVCEPLHWHDTATKLVKLMDEAGIEKAVVSAYLNLPGPDMTCAERLWNSI EPYKERFMMFLRMDPWFGQEAVDFLEESCRTYPVRGVKLHPAHYTLHPYGELTVNLCRKA GELGLPVLFHCGDEMMCLPLQIGELAAQCPDTVIILAHMGGYAHNRDAIEAAKKYKNIYI DTSEVPLVKEIRWFVDELGAERIFFGTDAPCCDPLVELKKVLLAGLSEEELEMVLYKNAV RVMGLEGEK >gi|224461045|gb|GG657759.1| GENE 1874 1963644 - 1965128 1714 494 aa, chain - ## HITS:1 COG:MA1276 KEGG:ns NR:ns ## COG: MA1276 COG0402 # Protein_GI_number: 20090140 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanosarcina acetivorans str.C2A # 3 459 14 439 442 245 32.0 1e-64 MKILLKNAKILTFDPEDKILERADLLIEGRKITRIGYRIEESADKIIDCTDKLVMPGLVN AHLHSDENMFRGRFDNLPLEPWMLYSCPPLDYGPFSHRLIYLRTMIGAMEMVKKGITCVQ DDVSECPKATVKGYDQVFQAYKDIGLKGNIAVNMGDRAFMDRLPYTKDCIPGQYHGLLSS HPDPDEMIETYEEVIRRWDRKDGMRVVFSTSAPQRCTDEYLMRGLKTALKYDLPMHTHIL ETRMQRATGPEFYGASIVKHIKDIGFLTDRLTIIHGVWMDEEDMRMIGEAGASVAHNPVS NLKLGSGIMPLRRMVQNNVNVVLGTDGMSSNDGYSMFETVKFAALLQKVMDADYKTWLDA RSILKMAIQTPAHSLRRTEEMGSLEEGKDADIAVINLKSEAFTPLNDIYKHLVYCEDGSD VETVISAGRILMENRNILNVDENALIEELQAMTGEFQERFKDTVEKNDALMPYVDRIYEK CIRQYEDCTCNLFV >gi|224461045|gb|GG657759.1| GENE 1875 1965143 - 1966867 1506 574 aa, chain - ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 69 574 31 531 531 125 24.0 2e-28 MSIKICACRGPLRGPSCAARKQADQNRADAIFAGEPMKSSLEWLVTASGLKNIKCIACDD LTNTRFDGVTVLDNPDAIRWVKQDELAVTTGYFLLHDEEAQKRIVRELKEAGCAGLGVKI RDYFQEIPEGMVKEAEKVKLPLLELPFYYSLSEVSQTIYNHIYELSYRSRVKEQKLIEDI SDIFFSKRGTMEIVYRIAEFLKRTVILLDSDFKCVYAAKRMNDKKLCMKDSVIRRLKSLK NDECVFLFPDKTERKGYTVTIPGAGANALLLVLEDAGELTKEEKSIIERCIKILSMALEQ ARSRQEDRYEFEDSYHKDLYEYLNGLRQYDDGELKNILRDIEMPFEKKRIMILLQIQGGF DAGTDYRELIQGCIRKCKEMRGFEPYILSRGRKFIVYLFACTDKSDPFMCSAAGKLADIM AERMGRINDGMEVQIGIGKSSDDFPGIKRAYQEAEKAVDIGEKLGMKEQVFAYNQLEFYD YLLQYPVKTKEQCCDSIRCLQEYDEENNTELVHTLLGFLEHKFNVSETAKALYIHRNTLI NRLNKIKELLYNDLETMDDLMPLCMEAYAYKLFS >gi|224461045|gb|GG657759.1| GENE 1876 1966764 - 1968086 1061 440 aa, chain - ## HITS:1 COG:DR1153 KEGG:ns NR:ns ## COG: DR1153 COG0044 # Protein_GI_number: 15806173 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Deinococcus radiodurans # 3 438 4 443 448 290 37.0 3e-78 MYDLAIEKGYVITAAGKRRLDIGISNGIIAGLSMPGMLGAAKESVQVPGRYIFPGGIDVH VHMDDLGADEPEDWRHGSMAAAAGGITTVADMPIDNVPATVDRRSLQMKLMRIKGNSFTD YMVWGGLTADNLDAVMPMLSEGAAGLKAFLCDSGAEDFPRVSDPVLLEAMRLAAKENFPI VIHAENEEINNYYSKKLKGRLRWEDWSRMHPEESELEAVARCALFARITGAGVHIAHISS AKSIALIQEARRQGARITCETCPHYLMFSEEDYPDKGAMLKCAPPVRGMRNRDALWEELK CGHIDIISSDHSPSADKSVTDAVDRAWAGISGVQFTLPVLFSEGCCKRKMPPERIAEVLS LRPAELLGIDKSKGSIELGKDADLAVLNPEKQTIYDENQIKTKVKNSVYKDMCLQGTVER TFLRGAEAGGSKPRGRYICR >gi|224461045|gb|GG657759.1| GENE 1877 1968089 - 1968877 857 262 aa, chain - ## HITS:1 COG:MJ1115 KEGG:ns NR:ns ## COG: MJ1115 COG0434 # Protein_GI_number: 15669302 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Methanococcus jannaschii # 3 256 5 259 261 72 26.0 7e-13 MRYAKEPVIIGAVHLPYYGRNNPSQSVAEIEEYVMANVKVHYENGIDTVYIQDENLNTGP ALPETIALTASLAKMVKMEVPGVKLGLIMQAHDGVAPIAAAAAAGADFVRIKVFAGTMYK AEGIRTGVGETAVQYRTMINSPVKILADVHDREGIPMPGVPVDMAIGWASHIGADGLILT GHDYKETMEYLETAEKMELGKPVLVGGSVSEDNIYDILDHCEGAVVSSSLMLDDPVPGSP LRWDAEKIRRFADKVRHYRKSR >gi|224461045|gb|GG657759.1| GENE 1878 1968874 - 1969854 1189 326 aa, chain - ## HITS:1 COG:BMEII0089 KEGG:ns NR:ns ## COG: BMEII0089 COG0524 # Protein_GI_number: 17988433 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Brucella melitensis # 150 311 149 308 313 67 30.0 3e-11 MDYVAVGCLSIDNIINTMGIKKLNVFGGNAAFGTAGISLWHDGEIGVVSRKGTDIPKEWI RMLEERGIDTEGIKDVPMRHMMFAGMIYDENGERREVTFNESEQSGELIAGFPVMTPEMV TMAHEIFAPAVSDIPESYSDAAVFLAARHYDRQLGYAKYFREKNPGGLIVLDTGSDYMRP ECIDKLPELFRLVDVVIPSEVEVKGIFGDIPMAEAAEKMIQLGARNVVIKIGKRGCLVYV NKEIIFVNAFHSDTVKDPTGAGDSFCGGFLVGYNKTHDLVTAAKYGTVSSSFIIEDFGIE PALHISRELAEERLKDVVCYTMEGKE >gi|224461045|gb|GG657759.1| GENE 1879 1969867 - 1971057 1232 396 aa, chain - ## HITS:1 COG:MK0127 KEGG:ns NR:ns ## COG: MK0127 COG0449 # Protein_GI_number: 20093567 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Methanopyrus kandleri AV19 # 39 386 247 600 617 153 30.0 5e-37 MNDKILPPLLKEDSILNAEDRALLMNLYEEEGDNTWKVVAGDDPLDERRLARNSYTYEEL VGQPDKIRETLSREKEAVKKAAGLLGQREIRQIYMVGCGDSVAALRGVRFFLESLLGIPC KEEDALDFAYYNSSAVDEKTLVITLSSSGRTVRVVEALLAARARGAQTLALSNTPDSPLM KAASAGILIHASRKGWPTQSSTAAMAVTVRLGLELGRVMGVSEAALGYYEEQFDKVPGLM EQAIEMTEKKIRKMAEELYSRKMFFFCGGGPFFTCAEYGAAKVKEATPVYAVPVLLEEFH HYNTLKKGDPLFLIAPPGYSVMRAIETIWAGKELGGSVIVLTSKNEAALVKEADEAVILP EAEECFANFVYAVPLQLFGYYLSVEQEKKAREKLGE >gi|224461045|gb|GG657759.1| GENE 1880 1971047 - 1971871 356 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 19 249 146 375 398 141 37 1e-31 MGDILLDHVSFTYKNGYEAVSDVSLSVRQGERVAILGQNGAGKTTTVRMMNNMRRPTKGT VMVGGKNTKDYTTAQISREVGYVFQNPDDQLFHATVREEVEFGPKTALKLPPDEVENRCG RALELAGLTEMKDENPFSLPLSIRKFVAIAAVIASDPDVYIFDEPTAGQDRMGLISLDKI IRSLQGLGKTVITITHDIEFAINTFDRIVVMAKKKIIREGTPEEIFHDEAVLKKAMLKTP YAVRFAKELSLGEEITTNEQLIEALARRESGYER >gi|224461045|gb|GG657759.1| GENE 1881 1971884 - 1972729 1073 281 aa, chain - ## HITS:1 COG:PAB0249 KEGG:ns NR:ns ## COG: PAB0249 COG1122 # Protein_GI_number: 14520589 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Pyrococcus abyssi # 5 281 3 279 280 189 41.0 7e-48 MAGKIIELKNVTYTYPLNSRPALKDISLELEAGKLYGIVGGNGSGKTTLCLAICGFATRF EKGTLQGEILIKGRNIDEYEDGETSRMMGYVLQNPFSQISGVRETVLEEIAYGLENLGVA PEEMEERVVAIAEKTDIESLLMKNPYELSGGQQQRVALASVLVLDPEILVIDEPTSQLDP EGTESIFKIIERLKEEGKTILLVEHKMDLLAEYADEMIVLEDGRNIAVGRTKEVLSDRRL EEHGIQLPQISVIFSELKKRGMCFDSIPVTYNEAVDLLKQV >gi|224461045|gb|GG657759.1| GENE 1882 1972714 - 1973529 718 271 aa, chain - ## HITS:1 COG:BS_ybaF KEGG:ns NR:ns ## COG: BS_ybaF COG0619 # Protein_GI_number: 16077215 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Bacillus subtilis # 23 229 20 228 265 63 28.0 4e-10 MQMEGLMYREQLMEKKKNKIAGLYPMCKIEMLGLYVILIILANIIQICQLPLLLIPLSLC IPLIFALSGQLKDYLSFIKMVSFLVCFLFVIQAFLIKGAQPVLVWQWKFLHIYLGGLDKG LTLSFNILNFAGIFYWLFKTSAYQEISAAMEQSGLHHKAAYVFLSTFKMIDVMKQNTYKI MDAQRARGVETEGNIFVRAKAFVPIIIPLVVNAMLEVGERALTLESKAFSVKCRKTIMIP ATRNGYEKRALIVSAVIVLSATGGAILWLVR >gi|224461045|gb|GG657759.1| GENE 1883 1973544 - 1974164 843 206 aa, chain - ## HITS:1 COG:no KEGG:Spirs_3925 NR:ns ## KEGG: Spirs_3925 # Name: not_defined # Def: signal transduction histidine kinase, LytS # Organism: S.smaragdinae # Pathway: not_defined # 8 204 2 195 211 143 39.0 5e-33 MGKTKKYSMKEDFSMVAVLTIPICVAINVVGDQIVQLLKLPIFLDVIGTVLMAMLAGPWP AAVTGVLTNLCMGITDNPTLIPFAITSAACGIAAGMFARKKWFSTQKWKLVIIVLVLDLV TICTASPITIFAFGGVSGNGGQSVAIAGLMASGANIIAAVVGTDFWVNLVDRSLALIIAF AVVKVIPDRTLIKYSLGANFTKKKPE >gi|224461045|gb|GG657759.1| GENE 1884 1974453 - 1975211 1053 252 aa, chain - ## HITS:1 COG:MK0183 KEGG:ns NR:ns ## COG: MK0183 COG1402 # Protein_GI_number: 20093623 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Methanopyrus kandleri AV19 # 20 247 17 220 224 100 30.0 2e-21 MYLGKMTTAQAKEAFQKDPVLVIPVGSTEQHGAQCALGTDYMVPSYLADHVADMEDVIIA PTVPYGVCPYHLSFEGSINIGYEGLYMVLHGIMDSLMQHGVKRFVVLNGHGGNTPSIDRA ALEVYHKGGICASIDWWSLVAELDEKFCGGHGDILETSAMMAVAPDAVHLELGQPMNAQH PSENVEAAYIQAVRYKGGTVRLVRDTKEIAPSGWFGPFDPKDSTAELGQEALDLSVEFIR GFLEEMKGFACK >gi|224461045|gb|GG657759.1| GENE 1885 1975226 - 1976719 1620 497 aa, chain - ## HITS:1 COG:FN0685 KEGG:ns NR:ns ## COG: FN0685 COG4145 # Protein_GI_number: 19704020 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Fusobacterium nucleatum # 39 489 37 483 484 183 27.0 7e-46 MSEAIQPSPVPFYTVLVIYLGIMAFIGWYASRKTKSLGDFFVLSGKAGVLVSGIAYFSTQ FSMGTFLGTPGTIFGVGYAGMAISVPGAVFCMILPALLIGRKLVTLGHEYGFLTMADYLT DRYHSRSMSGVLGVMMLFFLIPMMGAQIIGAGVIVHVFTGLPEWVGVVGMGIIVILYCMS GGMKGAMMTDVIQGSLMMGTAVITFIVSVKMGGGFHNINSTLQSMNESYLTFPGANGYMP WAYYVSNIVLWSFFTMGQPHLFTKFFTMKDHKTMFKAILLGTGGMFLSATLIEWAGVNGI ASIQNIEKADQIVPMILQRGLNPFLASLFIAGIVAAGMSTIDGILVTTTGAVTRDIYQKI VNKKATDDSVMKLSKVVTILIGLVVILFGVFQPGSIFEINLFAFSGMAVFVVPILFGMYW KRSTAWGAIASVAVGVAALLSFTLVPQLKELAHGFHALFPATILGAVTMVIVSRLTQAPP QETIDRHFKLLKKVSAR >gi|224461045|gb|GG657759.1| GENE 1886 1976719 - 1976991 300 90 aa, chain - ## HITS:1 COG:no KEGG:Spirs_3016 NR:ns ## KEGG: Spirs_3016 # Name: not_defined # Def: hypothetical protein # Organism: S.smaragdinae # Pathway: not_defined # 1 82 1 82 83 81 45.0 1e-14 MKKLFEKHFERTWLIIFLIMFVIIMIPFPFFYSETYIPAIGGIPSYIFGWFAHTAVTFTL IIIYYRMCMKRKEYHIYDEKNEEDTEGGEE >gi|224461045|gb|GG657759.1| GENE 1887 1977229 - 1978071 515 280 aa, chain + ## HITS:1 COG:BH2940 KEGG:ns NR:ns ## COG: BH2940 COG1737 # Protein_GI_number: 15615502 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 2 250 5 246 284 91 27.0 2e-18 MDILQRIRDLYPTLTKKQRGIADYLLENPEDVCYVTLAQLSHQTSSSELTLLRFCKKAGC SSFLELKNEFREYTQHMIRLLSAPAYFPPENASSEGSDKEALLTDICRREAAAVADFSAS FSPESIVAAAGEIKKSRRIFIFAHDISKILGEFLEARLRLLYFNASLIDLADLAETQNRL QHLNEGDLVIFFSFPKYYYPMGSIAKKAADTGVPILTITDSISSPAAEYSTHLLLCQTAT KMFYNSLTLPMTALNLLASCLVIDMVPESERKDFKKTLSS >gi|224461045|gb|GG657759.1| GENE 1888 1978137 - 1979216 1033 359 aa, chain + ## HITS:1 COG:no KEGG:Spirs_0032 NR:ns ## KEGG: Spirs_0032 # Name: not_defined # Def: hypothetical protein # Organism: S.smaragdinae # Pathway: not_defined # 1 351 1 346 349 293 43.0 7e-78 MEIGGFFPYEKNSIETNGYIDLVCPDAGDVSHLMSGRCAIYLCLKDFMLTDKKRTAYLPA YTCETVSGCFVKAGFEIYYYDVDRCLVPQFDDSLIDKIGFLLICGFYGFSTFDTDFVRTC RSRGVTVMQDTTHTAFSPYGACPETDYIAVSLRKWMGVTSGGLAVKRTGRFGVSPIPADT EHLKIRDLALYTREQYEKTGDETLNKKSADAFWKAEWMLREIFDMQAGDEASLRSILHYP LGDAIQKRRENYAYLLRHLPDDPAVRPVFPELPDDTCPMFFPFFCEDRESLMEHLAANGI PPKVYWPVPPFIDIEKYPGARYVYGHIMSVSCDQRFTTDDMQRIADVFTAYREKNSDNC >gi|224461045|gb|GG657759.1| GENE 1889 1979330 - 1980475 1284 381 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0178 NR:ns ## KEGG: CCC13826_0178 # Name: iadA # Def: isoaspartyl dipeptidase (EC:3.4.19.5) # Organism: C.concisus # Pathway: not_defined # 1 380 1 377 377 366 50.0 1e-99 MLLIKNAEIYSPARIGKKDILVCNEKIELIEDRIDGLPDSCRVIDAEGLMLSPGMIDQHI HVTGGGGEGSFHTRTPELALSEMIEGGITTAVGLLGTDGMTRSVENLYAKTAALNEEGVT AYMLTGAYGYPGPSITGEADRDIVFIREVLGMKLALSDHRAPHITPEQLMQTASRVRVAG MLSGKPGIVVLHMGDAPEGLEPVYEVLDRSALPVRIFRPTHVNRNGKLLEAGYGFLEKGG YVDYTCGMKGQPSPGQCIAEAARRGLPLEHITISSDGHGSWSSYGEDGTLQEIGVSGVDS LYRELKEMVKGLGMALEDALGYVTAHVAEALDIYPKKGCIAEGADADILLFTEELELHTV IARGAVMMEAGALKKKGTYEK >gi|224461045|gb|GG657759.1| GENE 1890 1980560 - 1981411 739 283 aa, chain - ## HITS:1 COG:all0345_1 KEGG:ns NR:ns ## COG: all0345_1 COG0789 # Protein_GI_number: 17227841 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 14 117 20 127 135 79 40.0 5e-15 MKKEYTCEVKMEDKLYRIGMFAAMNHVTIKALRYYDEQNLLKPVYVDSTTGYRYYTSGQL PEIHRILALRGMGFSLEEIRSIQAGHSEMEMLAARKRQLLSEIAEITARIAEVESYLSAD KIDTEHHVLIKALPEVITASMRKRISRYGALFDFMPFMGREMERLGCVCAEPEYCFSVYH DGGYREEDVDVEIYQAVTEKKQDSGLLQFKVVPEVETAACILHKGSYESFPKSYGRVLRF VEENGYEICGNPRESYIDGIWNKETKEEWLSEIQIPVRKINEY >gi|224461045|gb|GG657759.1| GENE 1891 1981446 - 1982186 926 246 aa, chain - ## HITS:1 COG:no KEGG:Clole_4062 NR:ns ## KEGG: Clole_4062 # Name: not_defined # Def: ABC transporter # Organism: C.lentocellum # Pathway: ABC transporters [PATH:cle02010] # 1 246 1 247 247 236 54.0 5e-61 MKRFWTLYKTEQKLGLRCPDGLIFGVAMPAGVLVLIAVIAGGKAAGGGSYTFLQSAFASL MAVGICASAFMGIPLTIADYRDKKILKHFFVTPCSPMALLAAVVACGVVTALISGGVISL FSVFMFGYRMQGNVLLFVGAYLLVMASMYSIGMLISGLCRSVKTANVVTTVVYFPMLFLS GATIPFELFPEKLQKAASILPLTQGIKMMKEISVGSPVKNVAGIVLLLTAVTAICCFAAK LTFRWE >gi|224461045|gb|GG657759.1| GENE 1892 1982183 - 1982905 316 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 5 218 9 228 309 126 35 5e-27 MRSCMKVDNLTKTFGKRTVVDKLSFQVERQEVFGLLGPNGAGKSTTIETALGLKKADGGT AEILGMDPALKRKKVFERVGVQLQSTNFQNNIRVEEICGELSALYKSPADYRELLCQFRL DEFRKQPVEKLSGGERQKLSVILALLPRPELVFLDELTTGLDAAARREVWQVLKELKAKG MTIFLTTHYMEEAESLCDRLLLIKHGRKIATGTVKEVVDGSPYDSLEDAYLWYMQEEGNV >gi|224461045|gb|GG657759.1| GENE 1893 1983041 - 1985077 2010 678 aa, chain - ## HITS:1 COG:lin2220 KEGG:ns NR:ns ## COG: lin2220 COG0577 # Protein_GI_number: 16801285 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 19 670 5 642 646 142 23.0 1e-33 MRSEKMRTDRTASKEVFRELAVKNVKKSGRDYLIYFMTLAFSVALFYTFNSIEAQFRVFG VPDRLNFLSFSSGMMAGVSLLVCLIMGFLVAYANQFMQKRRKREMGVYMTLGMEYEDISA LMWKETCLVGGASLAAGLVLGIALSQGLSMVTARIIGTDIADYRFFLSPKAVAAAVFFFG CMYFFVYRRNMREIRKMQLLELLYAGKKNENISRGKTKDILMFVLAAALIGGGYAVLAAP EKLYFTQGMFQGIAMIAAGSMLFCMSVSEVLVKVRKSSKRYYYRRLHLFAVNQLGSRMKS AGASIGVVSILVCLSISAMTLGLSIGGALVSDADEVAPYDVSFPLRKDEGLSEGLTVEQI LAQKGLVLSDYVKDSAELRIYNAKGLTSDLFGASAAEKEDADGQFKYYINIVGIDDYNRV MALQGKAPVKLGENEYAINYSVKEDRKKLENFMSHKGRTVQLEGTELTPASKGLYNRVYG NENVYSDGGTLIVPQRLTEGLELFAAVDSGTFLNADSYEKLSEAILAIPEHITCNTHMDI KVEIMSNILTVSYIGIYLGITFLIVAGAVLALQQLSQAADNEQRYALLRKMGARDKDMKE SLLMQLRVYFGIPFMLAVVNALFIIRGMLAGVEEISTGKLLQTGMFTGGLVVAVYGLYFI VTYTGSRRILKLKSSFLK >gi|224461045|gb|GG657759.1| GENE 1894 1985067 - 1985834 870 255 aa, chain - ## HITS:1 COG:lin2219 KEGG:ns NR:ns ## COG: lin2219 COG1136 # Protein_GI_number: 16801284 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Listeria innocua # 1 249 1 249 255 281 53.0 8e-76 MDTILKVRDLEKFYKNKGSLTKAVNHISFDVQSGEYIGIMGASGSGKTTLLNCISTIDSA TSGQIWVRGTDITVLDKRRLAKFRREELGFIFQDFNLLDTLNARENIALALAIKGERPGT VERKVQEVAADLGIADILDKYPYEMSGGQQQRVACARAVVTKPSLVLADEPTGALDSKSA GMLLESFRMMNEKKNATLLMVTHDAFTASHCKRILFIKDGRIFNELVKGSRSRKQFFDEI MQVVSYLGGGLSHAV >gi|224461045|gb|GG657759.1| GENE 1895 1985958 - 1986977 887 339 aa, chain - ## HITS:1 COG:lin1852 KEGG:ns NR:ns ## COG: lin1852 COG0642 # Protein_GI_number: 16800919 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 1 336 1 334 346 150 29.0 4e-36 MSFSQYIKDRWFALFTELFISFLAAAFLSVMGSPAPVTAAVVILYFAGVLLSAGYDFLRK KRYYDELSDTLEQLEEKSYLSEMIEEPEFLDGQILYHVVRTNGKYLNDMIAKQRRELEEY KSYVQTWVHEVKTPIAVERLILENHKGEAAEGLAEEIDKIEKYVEQMLYYSKSASVESDY IIRPLSLKKLCMSAVQRNARMMVAEGVSPKFGSLDCEVLADIRWMEFVLGQIITNAVKYR DKERDSWLSFSAEQTDEKEGRGKNRIRLTVEDNGIGIASQDIPRVFAKGFTGENGRLFKK STGMGLYLCRNLCERMDIEMEIRSVKGEGTAVSFYLNTI >gi|224461045|gb|GG657759.1| GENE 1896 1986974 - 1987639 648 221 aa, chain - ## HITS:1 COG:CAC0224 KEGG:ns NR:ns ## COG: CAC0224 COG0745 # Protein_GI_number: 15893516 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 221 1 222 223 188 43.0 6e-48 MERIFIVEDEEKIRSELKTVLEKNGYTVEAAAEFGDIPRQIMEAAPDLVLLDINLPVNDG FYICREIRRQSDIPVIVVTSSDSDMDELMSLNVGADDFITKPYNIHILLAHIGTVLHRVK GPGRSFVITHKGLSLDVLGSSASHRGKKADLTKNELGILKYLMEHAGAVVSRNELICHMW EMEEFIEDSTLTVNVNRLRRKLSDIGLDDYLLTKRGQGYMV >gi|224461045|gb|GG657759.1| GENE 1897 1987742 - 1987927 83 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569826|ref|ZP_03778851.1| ## NR: gi|225569826|ref|ZP_03778851.1| hypothetical protein CLOHYLEM_05920 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05920 [Clostridium hylemonae DSM 15053] # 13 61 1 49 49 97 100.0 3e-19 MRHKRPWNAIYSMDVCHFGILFPAEQFVGSCIQNLRECLEFYICHKSFSALDSLYGGFLR A >gi|224461045|gb|GG657759.1| GENE 1898 1987924 - 1989426 1615 500 aa, chain - ## HITS:1 COG:TM0284 KEGG:ns NR:ns ## COG: TM0284 COG1070 # Protein_GI_number: 15643053 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 3 498 2 503 506 296 34.0 7e-80 MQYSLGIDIGTTTVKCILFKEGPEVAAEAEKEYETLLPEPSWVQQDPDNWWDAVVQCIRI VLAKSWVDAEDIKVISVSSQAPAVLPVDKNGKPLHDALIWMDRRSKEEYEIIKERVGEDK IFELTGNRLDTYFTLTELMWFLRNKPELMEKCCKVLQVNGYINYKLTGTFSIDDTHASLT QIYDIHRCCWSEELLAAVGADRSLMPDVYRCCEPIGNVSKAAAQMTGLSVKTTVLAGAVD ATAAGLEAGVYEGGRIAEMTGTSSVVLIGFDRLVTARELSYLKGRGENSTILYGPMNTAG GSLKWFRDALFGGETVRKDSYRRINSEIEKMAKYPSKIIFLPYMAGERAPIWDPDARGTF IGLNLNTNRAEMMRSIMEGTCFALKDNLNQALKIGIPIHDIICCGGCSKSEIWLKIKASV IEKEIKLPEVNLGAPGGLSYINAAYMGEYKSPEEASAACLKIRKTVEPVKEWIEPYREMF DVYEESYRSLKEQFKALVKI >gi|224461045|gb|GG657759.1| GENE 1899 1989444 - 1990496 1233 350 aa, chain - ## HITS:1 COG:MTH970 KEGG:ns NR:ns ## COG: MTH970 COG0111 # Protein_GI_number: 15678988 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanothermobacter thermautotrophicus # 40 349 36 317 525 182 36.0 1e-45 MKTLITARFDRKYEKLLETVTSDYTFAGYGVIGEKMPAAEMKEKIKGIELLITEFEDITK EVIEAADRLRVIVCCRNEAFASIDIEAATAKKIPVLRAGGRNAVAVAEHTIALLMCVSKN ISLTDHLLKYTDELTGVSYKDDGGKRAQTMSEWSMDPDAPFALYGGGPEMYGKIFGQVGF GMIGREVAKRAKALGMELLVYDPYVEQEDMDYLGAKKTDLDTVMKESDFVSVNCNVVPET EGLISRDRIALMKPTAYFVNTARARVLDYDALYDALKEHNIAGAGLDVYPVEPIPSKDKF LALRNVVLTPHLAGSARDIVGHQTEITLGDVKKLLAGERPRFICNPEVLS >gi|224461045|gb|GG657759.1| GENE 1900 1990511 - 1991164 822 217 aa, chain - ## HITS:1 COG:TVN1450 KEGG:ns NR:ns ## COG: TVN1450 COG0235 # Protein_GI_number: 13542281 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermoplasma volcanium # 4 204 3 200 218 146 37.0 2e-35 MNRQKAKLTQIEVCNTALSMYHSGLVAGTWGNISGRVDDEYMVITPSGMDYERLAAEDMV IINMHTLAYEGNLKPSVEAVVHASIYLDRPEVNGIMHTHSTYALTVATARKPIPPVCDDQ VQILGGEVRLAAYTMPGTKEMAEEVVGALKERAGALIANHGAITVGRTLTEAYVGSQVLE KAAMVYINSQSIGGPVEISQEDIDFFHDFFLNKYGQR >gi|224461045|gb|GG657759.1| GENE 1901 1991184 - 1992221 1332 345 aa, chain - ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 1 337 2 305 524 228 42.0 2e-59 MKIFFTAEYNEEELKPLYEVGEVVKDGWALGLPKMPEEELAEKTRDADMIITSYDDITRK VIENAEHLKLIACTRATPVNVDMAAAKERGIPVLYTPGRNSDSTAEMTIGLMLSAARKIP MAYKALKGGEYTGDPSSRKETKEGLKADVIWDMKADAPYMVFKGTQLKGKTLGILGYGSI GRRVGRIARAFGMQLLIFDPFVGEVDVEEIGIKKAHSVEELMKESDFITCHMKVTPETTG IISRERIALMKPTAYFINASRGAILDEEALIEALKEKRIAGAAFDVYESEPIARDHPYIT ELDNVVVTPHIAGATDDVLVNHTKQIVSDIKRFLKGEHLLYQYRY >gi|224461045|gb|GG657759.1| GENE 1902 1992226 - 1993755 1681 509 aa, chain - ## HITS:1 COG:TM0116 KEGG:ns NR:ns ## COG: TM0116 COG1070 # Protein_GI_number: 15642891 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 1 493 1 490 492 230 30.0 4e-60 MKYILGIDVGTSNVKAVLFDECGNEVSVSSRESRTINGAANQVEQDMLLVWEKVKQCVKG VMEAGAASGEEVAAIGVTGQGEGCWLIDKDGNPVQNAILWCDGRAVDEVKAITQERPEVG ELYHTTTGTPPLLGNQMVLLKWMKHNRREILDKARYMIFCKDWIRFKMTGEIRTEITDSL TSLIDVKDGTIAEELMKELGVYEYRRCIPAPVRSDEVVGTILDSFADETGLRRGTPVIAG ALDTSATAVGLGAIHEKDVCVILGTTCASEIVMKKEDCEFGAPNSRYEKHPIGELFVELQ PTLNGTPNIDWMLSNISLTKDFKEIDKIVDSIPVGCGGVVYHPYISVAGERAPFYHPYAR ASFFGISQVTTREHLIRAVYEGISLSIRDCLRNVDKRGTIYLAGGGAKSPVWAQMIADVA GMKVMIPSGEELGAKGVALMAGVSQGLYKDYDEAAEKACKFKRVFHPDPGNVKKYDLIYE LYKRVRIHNQEIWDYRHQMNKKIKAIEED >gi|224461045|gb|GG657759.1| GENE 1903 1994009 - 1994896 918 295 aa, chain - ## HITS:1 COG:BH0780 KEGG:ns NR:ns ## COG: BH0780 COG2390 # Protein_GI_number: 15613343 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Bacillus halodurans # 2 294 21 314 316 144 28.0 1e-34 MGMTQDEIAKRLSFTRQKVNQIISSLIDLDVVNINIHGYERDNVELECRMEERFGLKEVL VTEDYGESSTAIYKVANVAAQYLDENIRQGDIIGVSWGHTLSEVVKQMEFKRRSECRVVQ LIGAQNIEELVEKSDEIARGLANRLDCPSYMLYAPVVVEHAETKKWLMQERSIRVSCELM QKCDVALLGVGELTEQSTMCTRGHITRNDVRILREQGFVGDIAMNPIRKDGSWDNCPLSD RLLNADMECLKGIKNTVLIASGAQKVEAIQAALCTGTINTLIVDVTTARQVMDSF >gi|224461045|gb|GG657759.1| GENE 1904 1995101 - 1995739 881 212 aa, chain - ## HITS:1 COG:SMb20313 KEGG:ns NR:ns ## COG: SMb20313 COG2376 # Protein_GI_number: 16264047 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 1 207 1 207 213 199 54.0 5e-51 MNTFKNADGKPVLMNMVKAVQDNKAYLGEVDGLIGDGDHGMNMNKGFSVFEQRFADKDFS FTEGLDELGMILLNEIGGSMGPIYGTIFMDMAEAGEELEDIRVEDFGNMLAAGLAGLQGI VEAKVGDKTLVDTLSPAVDAVKAAHEAGEDYKEALVKMSAAAEAGRDSTKDMVARFGRSS RLGERSRGVLDAGAASCCIILKAMAEGILKMI >gi|224461045|gb|GG657759.1| GENE 1905 1995761 - 1996756 1361 331 aa, chain - ## HITS:1 COG:BMEI0396 KEGG:ns NR:ns ## COG: BMEI0396 COG2376 # Protein_GI_number: 17986679 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Brucella melitensis # 1 321 13 334 342 409 65.0 1e-114 MQRILNNPDNIVDEMLKGFLKAHEDIVEAAKNPRVVRAKHIPEGKVGVVTGGGSGHKPAF IGYVGENLCDAAAVGEICSSPTAAAFLDACRAADQGKGVACLYGNYSGDNMNVKMAVKMA KKEGITVKTVVANDDVASAPKDEREKRRGVAGEVLMWKVGGAKAAKGGDLDEVIAAAQKA IDNTRSVGIGLTPCTLPAVGHPNFEIKDGTMEVGIGHHGEPGIEVCPLETADKMAKRMVD VVLPDYPFTEGDEVVVLVSGLGATPVMELYVLYDEIDRLLKEKGILIHRAYVGNYFTSLE MMGATLTVMKLDEELKELIDMPAYSMGLKQK >gi|224461045|gb|GG657759.1| GENE 1906 1996770 - 1997861 1399 363 aa, chain - ## HITS:1 COG:YPO3352 KEGG:ns NR:ns ## COG: YPO3352 COG1063 # Protein_GI_number: 16123502 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 4 361 15 370 371 465 61.0 1e-131 MSNLPEKMKAIVAYAPGDYRFEMVDTPRAGEGEMILKVEACGICAGDTKAYAGAASFWGF DGQAKYIKEPMIPGHEFVGTVVEMGDKVKGNWKIGDRICPEQIVPCGECMFCKTGRHWMC EKHDLFGFQNNVNGGMAEYVKLTKEAIPYLVPADMPLEQAALIEPYGCSFHCVERAQVTP RDFVVLSGVGTLGLGMVGALRQANPKCLVVLDMNETRLAKAVEFGADIAMNPAKEDVVAK IKEMTGGYGCDIYIEATGHPSSVQQGLDAIRKMGRFVEFSVFGQPVTVDWSIISDRKELD LLGVHLSPFCYDTVIEWIGSGKLPTEGVVTHKFPLEKWEEGFHIAKTGENGAMKVILVPD MEA >gi|224461045|gb|GG657759.1| GENE 1907 1997894 - 1999015 1197 373 aa, chain - ## HITS:1 COG:TM1276 KEGG:ns NR:ns ## COG: TM1276 COG3839 # Protein_GI_number: 15644032 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Thermotoga maritima # 1 371 3 368 369 299 43.0 5e-81 MAGLRIEHLYKRYENNGKKKKNAVQNDYAVNDLNLVCEQGEFIALLGPSGCGKTTTLRMT AGLEDITKGDIYIGDTLVNKLHPKDRHIGLAFEDYAMYPPLTVYDNIAFNLKAKGVDKAE IDKRVQEIAPLMQCDDLLDKMPVKLSGGQKQRVNIARAIIRRPELLLMDEPLSHLDGKAR QAMRTEIKRLINDIKCTTVYVTHDQLEAMSLADKIAIINFGVLQQFGTPAQVYDDPVNEF VASFIGEPPMNILETTITADEGHFFFTFQDSNLKIAVPERYHNVVSAGFRCKMGVRPMDV LIGGADSVGTPEEVATFENLGDERRIGIHVGEALLMLITDDETRYKSGDIIKLEVRGEKT HLFDIETGERIRE >gi|224461045|gb|GG657759.1| GENE 1908 1999020 - 2000171 1368 383 aa, chain - ## HITS:1 COG:APE0043 KEGG:ns NR:ns ## COG: APE0043 COG3839 # Protein_GI_number: 14600403 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Aeropyrum pernix # 1 367 14 380 381 285 41.0 7e-77 MSRIQLENVTKKFGKVTALDGISLDIKDKEFFVLFGPAGAGKTTILNCIAGIQIPEEGVV KFDGEVMNLTDAAHRDTAMVFENYALYPQMTVYDNMASPLRSPLYKKDEEYIRQKIQEVA EMMKMDYLLKRLPSQLSNGQKQRVAMGRALVRSPRVYLMDEPLAHLDAKLRNSMRTELKE IQANFGTTSVYVTHDFMEAMSLGDRIAIVNQGKIVQIGTGDEIYYMPRNEFVSQLMGDPE INLIAGTLKKDGDSYTFDMKAGNKSYRLPDDFELFEKLDELGCENVDIGMRPQNLKYSFE PKEGYLKCTVYSYESIGNKSVIVAELEGLQLRMIAPNGLTVRIDQDIYVDMELNYAMFFD AETKEYLTRYNEAAVLALTEQEG >gi|224461045|gb|GG657759.1| GENE 1909 2000182 - 2001003 900 273 aa, chain - ## HITS:1 COG:SMc01626 KEGG:ns NR:ns ## COG: SMc01626 COG0395 # Protein_GI_number: 15965991 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Sinorhizobium meliloti # 1 273 1 285 285 221 43.0 1e-57 MESKKMLGRVVQNLLLVIYTIFALFPLLWMLILTIKPDAQMYTTTFVFNPTLDNYRAVIF QSDYLKYMLDSLIVAGGAVAVSVVAGVPAAYALARYNFKKKEDIAFQILSFKFAPEILVV LPLFMLFQKLGIYDSYFGLIWVYQLICMPLLIWVVRGYFEDISVEIEHAAQVDGYTWYQI FFKMLVPLIKPGLVSAALLAFIFAWNSFTFPLILAGTNVQPITVAITKFLGTDSAHYGQL AVAATVSALPAIIFALCIQKHLVRGLSFGAVKG >gi|224461045|gb|GG657759.1| GENE 1910 2001049 - 2001987 952 312 aa, chain - ## HITS:1 COG:mlr7264 KEGG:ns NR:ns ## COG: mlr7264 COG1175 # Protein_GI_number: 13476050 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 22 309 19 306 307 194 38.0 3e-49 MKEQKKDSAAVSELNVVPFKTRMRPYLIVAPALIITIGIMIPFVMSIYFSLTSYSFRMPT YSFIGLKNWITILQSSGFWKSVWVTLRYAFFSTALEMGIGLGIAMLLNNLENRFSKILRV VLIFPLMVAPITATIIWQLMLNNSVGIVEKFLNFFGVYNFPWAASASTAMMTVVMIDVWV NTSFCMLLVLAGLQSLPKSPFESAKIDGGSAWFNFRNLTLPMLKPSLYIALLFRLMAALQ EYAIIFGLTKGGPGDTLMNLSLTSYQTGFQFQKFGFALPYILVLWVFINIVAKQIVKRQR AAQRLASGQDEQ >gi|224461045|gb|GG657759.1| GENE 1911 2002126 - 2003556 1353 476 aa, chain - ## HITS:1 COG:SMc01628 KEGG:ns NR:ns ## COG: SMc01628 COG1653 # Protein_GI_number: 15965993 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 19 446 26 454 481 310 40.0 5e-84 MKKRVISVLLCAVMVGTMLAGCGGGSGSGGSDDGKAKSSGKAEDFDWKNYDGTTINVMFN EHNYSKAVISKIKEFEELTGIKVEYSSTPESNYFDKLNTSLSSRSGTPDVYMTGAYQVWE YASAGYMEPLEDYINDASKTAADYNYDDFISATVDPLKWDLVPGHAVGEGSQWALPMGWE LNNLAYNKKVFEEKGITVPTTTDELLETAKSLNEFNGSGSYGIAVRGTREWATIHPGYMS LFATWGGKDFAIEDGKLVCQLDSKEAIEMTDYWVKLIKEAGAPQWSNYTWYEASSDLGAG KAAMLFDATSAGYFQNYEGASDQSGNIAWSTIPLPEGKTEADMKANVWIWSLAMNADSKN KDAAWYFIQYFTSPDYMLYAGTDGASPDTPRTSVMESDEYKAIVGKADNYLESIDVLSKN ATIQFTPQPYFFECTTKWAEVLQDLVLTDKYSSTEDAMKQLKKDLDTIVSDLEVSE >gi|224461045|gb|GG657759.1| GENE 1912 2003899 - 2004501 487 200 aa, chain + ## HITS:1 COG:no KEGG:Closa_0515 NR:ns ## KEGG: Closa_0515 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 4 186 6 194 260 65 26.0 1e-09 MKVFEYDSSFMKFILLLSRLTVLNIIWLLCCIPVVTAGAATAAQYYTASRILGGSTEVWR NFKTGLRLHWKRSSVIWTAFALLTAVFAAEYYILTTAAVPGKTALLAISGLAFLTAVLIM LWIYPVMINFTGSLGEILFNSFVFTFMYAPITLIAAAFYGVAGFLFIRFNFTKGLFVLFG QSLIVYGILVLFEKVLRKYR >gi|224461045|gb|GG657759.1| GENE 1913 2004531 - 2004614 88 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVVYGAGAVNRQSGRGHREELRAFGGR >gi|224461045|gb|GG657759.1| GENE 1914 2004854 - 2005939 1479 361 aa, chain - ## HITS:1 COG:YPO2502 KEGG:ns NR:ns ## COG: YPO2502 COG1063 # Protein_GI_number: 16122723 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 8 348 58 396 408 411 55.0 1e-115 MANQGRTPKTMKALVAYSKDDYRFEAEYPAPECGPDDIIIKTEACGICAGDLKCSHGAAM FWGDEVQPSWVKPPFIPGHEFFGRIVEMGENVEGYELGDRIIADQIVPCGKCRFCKDGHY WMCQPHDMLGFQSYNNGGMAEYVRYPKNCVISRVPEDMSIEQALLVEPYGCSKHAVDRGS ITNEDIVVISGAGTLGLGMITYARMKNPKQLIVLDMQDARLEKAKEFGADLVFNPGKCDI DKEIKALTDDYGCDVYIEATGHPSSVIQGLTITRKLGRFVEFSVFGSETTVDWSIIGDRK ELDILGAHLSPYAYPFVIDNMMKGNLKTKGVVSSTFAIEEWEKAFDYASGKYGDLKVAFT F >gi|224461045|gb|GG657759.1| GENE 1915 2005974 - 2007482 1624 502 aa, chain - ## HITS:1 COG:STM3674 KEGG:ns NR:ns ## COG: STM3674 COG1070 # Protein_GI_number: 16766959 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Salmonella typhimurium LT2 # 1 493 1 486 498 336 36.0 8e-92 MGKYVIGLDNGGTSTKAAIFDLSGKEIASAGRQTKVITPRSGYTERDMEELWLANCDCVK RALLKAGTDGRDVLGIAVCGHGKGLYPWGKNGKPAYNGIISTDSRAWKYPKKWHENGVYE SLRGQLCQELMACQQVALLAWFKEHHRDVYDNIKYVFSVKDYIRYRLTGEAYSEATDISG SGLMDVKHAQFDREILEKLGIGEVYEKLAPVRYSYDLCGTITKEAAKLTGLLEGTPVAGG MFDIDACAVAVNVMSPDELCTIAGTWSINEYISETPVMDGSIAMNSLFAVPGYYLVEECS ATSSGNLEWFLENCMEHEHIPEGKNIYDVVNEKVDSIPPEESEVYFLPFLYGSNAHPLGK GAFVGLTTYHDKAHMLRAVYEGVVYSHKTHIERLLSSRKPPEAVRMAGGAVNSGVWVQMF ADALGFPIETVEAKELGALGCGMAAAIAAGVYKDYKDAAEHMVHVSGRIYPDEAKTAVYQ RKYEKYREIVRALDTVWGQFEV >gi|224461045|gb|GG657759.1| GENE 1916 2007507 - 2008376 862 289 aa, chain - ## HITS:1 COG:STM4387 KEGG:ns NR:ns ## COG: STM4387 COG3623 # Protein_GI_number: 16767633 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Salmonella typhimurium LT2 # 9 265 8 259 284 212 42.0 7e-55 MSFKDTYRLGVYEKAAPAELSWEERLAAAKEAGFDYIEMSIDETDMRMSRLDWCDEQIYE LLETEKRVGIPIETICFSAQRKYPLGSRKWEKEAKELLRKGVLFARKMGIRIIQTQGYDC YYEETSDKTTRERFYRNLEEGTMFAASHGVMLAMETMENDFMNTVEKAMHSVNRVNSPYL QVYPDIGNISNATKDVAGDITTGRGHIAAAHLKETVIGKFREIPYGTGQVDFPGAIAKLY EHGVRRYVAEYWYCGEENWREIARSNREFLDRQFEKARQLLGIPEDISA >gi|224461045|gb|GG657759.1| GENE 1917 2008566 - 2009615 1136 349 aa, chain - ## HITS:1 COG:L0336 KEGG:ns NR:ns ## COG: L0336 COG0544 # Protein_GI_number: 15672533 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Lactococcus lactis # 31 339 116 421 427 124 29.0 4e-28 MRKRMLVCAVLLGTAAALAGCGSGQISNDYITVSKYKGVEVPKVEGIPDITDESVDNNIE TVREGFAEIKDVTDRAIQEGDVVIIDYAASADGQPIQNGSGSDYELTVGSGSFYEGFDDN LIGHNAGDTLNIEHTFADDFNNKTLAGKKASIDVTVKAVREKELPELTDEFVRTISQKSD TVEEYRKEVRKLLEENNKEYIQSELMDSAWKQVLENTEVKKYPKDRLKEEEQSFYDHYED GADMYEMDFPEFLSKIDMTEAEFKEKAEEAARSNVKEDLTVELIADKEHIKLDDKAYKKA KKELAEEMGYEDVKAMEKEAPEESVRRYILREKVKEWVADNCIQAAPEK >gi|224461045|gb|GG657759.1| GENE 1918 2009858 - 2010643 749 261 aa, chain + ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 3 260 17 274 277 135 34.0 9e-32 MIKLIASDLDGTLLLNGAQRLNPEVFDLIRALKEHGILFTAASGRQYTNLRRLFAPVKDD IAYVAENGSLCIYEGKTLSKGMIGRELGLRIIDAVHSYGRCECIVSGERVCYTDSRDTRF KEHMLHVVGNDMEFVSDLKEDVHEPFLKLALCDFQGTRKTEEHFKALFSDEIKIVTSGNI WVDFITPGANKGNALQVLLDHLHIDAKDCAAFGDQCNDEEMLQLAGVSYAMAGAAPAVIQ QASHTTDSVENVLKRILEALE >gi|224461045|gb|GG657759.1| GENE 1919 2010743 - 2011435 749 230 aa, chain - ## HITS:1 COG:VCA0244 KEGG:ns NR:ns ## COG: VCA0244 COG0235 # Protein_GI_number: 15601012 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Vibrio cholerae # 1 228 1 229 230 309 64.0 3e-84 MLEALKKEVFEANMMLPKYGLVTFTWGNVSGIDREKGLFVIKPSGVEYDKLKAQDMVVMN LDGEKVEGEYNPSSDTETHLELYRAFPDMGGIVHTHSEWATSWAQAGRGIPCYGTTHADY MYGEIPCVRNLTREEIEEAYEKNTGLLIVEHFKGREYMAMPAVLCKNHGPFTWGKNAAEA VHNAVVLEEVAKMAARCELINPQVRPAPQELQDKHYYRKHGANAYYGQNK >gi|224461045|gb|GG657759.1| GENE 1920 2011634 - 2011738 241 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGYMVENGFMGCVDGRYMLFACEADYEEYVKED >gi|224461045|gb|GG657759.1| GENE 1921 2011980 - 2012975 1040 331 aa, chain - ## HITS:1 COG:no KEGG:bpr_I1973 NR:ns ## KEGG: bpr_I1973 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 327 1 328 328 349 54.0 1e-94 MPKGANQKLKLYYLMKIMLEKTDDDHSITMPEILAELERYEVTAERRSIYADLQTLDRMG VEIIGEPVGKTYHYHVGSRQFELAELKLLVDAIQSSKFITAKKSNELIRKLEGMCSEYEA KKLQRQVYVSGRIKTMNESIYYNVDSIHNAIAENRKILFQYYQWNIKKEMELRREGTYYH ISPWGLCWDDENYYLVGYDAEDQIIKHYRVDKMLRIKMSDEQREGKEHFHQFDIAAYTRK NFAMYGGKEERVKLLMDNSLAGVVIDRFGKDISLIPADEERFTVSVDVAVSRQFVGWLFA LGKGAEIIGPDKVVRQVREEIRRLAEQYEVK >gi|224461045|gb|GG657759.1| GENE 1922 2013025 - 2013753 542 242 aa, chain - ## HITS:1 COG:PA1520 KEGG:ns NR:ns ## COG: PA1520 COG1802 # Protein_GI_number: 15596717 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 4 167 19 182 259 90 32.0 3e-18 METRKNSYELQAYEKIKEAIYKRRLAPGAPLVEQSLCDAFHVSRTPVRNALRRLSQEGYV EIIPNKGAFVIQPSIEDIRQLYEVRIELEIFAVHLCIETFREDDIKILQEILDQEQKAFE DRDFPLYMETNTEFHVTIVDKAENQYLSDIFHSIYKKMNIILTLYDNFYVPIAQDIQSVK YHELMILAIENKQVGKFEKLLKELCDTIYHAFRQRLVTYSDVQTAVIDMNDAPNSRDVRF TL >gi|224461045|gb|GG657759.1| GENE 1923 2013827 - 2015269 1330 480 aa, chain - ## HITS:1 COG:BS_mleN KEGG:ns NR:ns ## COG: BS_mleN COG1757 # Protein_GI_number: 16079413 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Bacillus subtilis # 14 472 11 467 468 245 32.0 1e-64 MGKISESRKIKFPEAIGLLVAFVAILMWGALSAGIPTGISICLCSFTAALYGIIVLHKSW NEIQTGILKVIGIGMPATLILLMVGLISGSWLSSGTTPILIYWGLKILNPSIYLAVTFLI TAIGGMATGSAWAIMATFGVALMGVANGLGIPAPAAAAAICCGSYLGDKWSPLSDVTNLA SAVTEENSFRLFGCMIPTSGVSAGIALVIYAVMGFVMGTHGTFDASQTKEIISTLEDTYT FNPILILPLIVVVVLAVMKKPIFPVLVIGAGIGTVFSILIQGSSVTDALSALYNGYTVTT GNEAIDGLLSGGGLSYMMSLILMLFCAFVFAGIMESMGLLDAILEKLIKVAKSRGNLILI SMITTVLGVYMTSSVYVSTIMNGRMYLPAYEKEGIDKIALARTLTECASNFGAIVPWSNG AIIMLSTFGVAWYQYAPYMFNHWLAMILVLICGYTGKFLPLSKKQDIESQDIYNTDTGGK >gi|224461045|gb|GG657759.1| GENE 1924 2015303 - 2016379 694 358 aa, chain - ## HITS:1 COG:no KEGG:Mahau_2054 NR:ns ## KEGG: Mahau_2054 # Name: not_defined # Def: NAD/NADP octopine/nopaline dehydrogenase # Organism: M.australiensis # Pathway: not_defined # 2 354 3 352 367 211 37.0 4e-53 MKVTVFGSGNGGCTLAADWALAGHEVRLFDFKQFSANIDAVNEAGGIAVSGCVKGFAKLS YCGCDIDRALDGCDILYVVGPAYSTESFGKACRGKLPYGQKVIIVPGSCGGALIFKKALG LNYDDESVIAGETHTLPYACRVMDPGVIQVYHKLTGWVYIAALPSKYTDELYRIFNQVNP CVPAKNVLQTTLTNGNPAIHPAGTLMMAAWIEATGGDFYFYENGIQPSVGRLIRSIDTER LSIAKAMGFDLYPGPVLTKKQGYLIEDDYENCYRSAPGFKGVKAPQKLDTRYFHEDVGFG LVLFEELGRKFGVEVSNISSVITIASTIMQRDYRAERARTLDKLGLGDLSCQELLNCL >gi|224461045|gb|GG657759.1| GENE 1925 2016652 - 2016840 192 62 aa, chain - ## HITS:1 COG:no KEGG:Tresu_2680 NR:ns ## KEGG: Tresu_2680 # Name: not_defined # Def: hypothetical protein # Organism: T.succinifaciens # Pathway: not_defined # 17 62 25 70 70 69 76.0 4e-11 MIIAERKPKAVVGNFDRFGEAMSDGRLTVPSDGKVYRLREAILLSKKLGRPLTEEEMEKF VV >gi|224461045|gb|GG657759.1| GENE 1926 2016842 - 2017366 290 174 aa, chain - ## HITS:1 COG:no KEGG:Tresu_2679 NR:ns ## KEGG: Tresu_2679 # Name: not_defined # Def: hypothetical protein # Organism: T.succinifaciens # Pathway: not_defined # 1 172 1 172 174 248 67.0 8e-65 MEIDIYIDSLTNCLICNATGEERDTEYRFVAKTIARPVAAQFKEIGWKFDWSIPHQNGYD VYELLLKDDDEVQGMIALKHVRDQYYTHVDIVEAAPFNVGKTGKYKGVGAHLFAIACKLS WEAGNEGYVQFTAKTDLVEHYKKTLNAQCIDWHTMYIDSYGAVGLINKYFKEGE >gi|224461045|gb|GG657759.1| GENE 1927 2017468 - 2017551 81 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MINKVAKSENFNYHSLRHAYRLDWQKK >gi|224461045|gb|GG657759.1| GENE 1928 2017718 - 2019658 2187 646 aa, chain - ## HITS:1 COG:CAC3197 KEGG:ns NR:ns ## COG: CAC3197 COG1190 # Protein_GI_number: 15896444 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 9 499 22 515 515 560 58.0 1e-159 MSKQQGNVQEPDLNQLRKVRREKLKELQENGKDPYQVMRYEATVHAADIKENYDEMEGKH VSVAGRVMQKRVMGKASFCNVLDQSGNIQSYVARDSLGEEAYKEFKKLDIGDIVGLEGEV FKTKTGEISIHATAVKLLSKSLQILPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTFIKRS HIISAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALSEDFKLRISLELYLKRLI VGGLEKVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGT TTIVYNGVEMDLGKPFERITMIDAVKKYAGVDWNEVHTLEEARALADKHHVEYEDRHKKG DILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPEDPEYVERFEFFMNGWEMANAYSE LNDPIDQRERFRAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDS AAIRDVLLFPTMKSIGGTDVSKKAAAPEGSAAAEAEKAPEKIDFSNVKIEPLFEEMVDFE TFSKSDFRAVKVKACEAVPKSKKLLKFILDDGTDAERVILSGIHEYYEPEELVGKTCIAI TNLPPRPMMGIASCGMLISAVHEEDGREGLNLLMVDDRIPAGAKLY >gi|224461045|gb|GG657759.1| GENE 1929 2019698 - 2020180 601 160 aa, chain - ## HITS:1 COG:CAC3198 KEGG:ns NR:ns ## COG: CAC3198 COG0782 # Protein_GI_number: 15896445 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Clostridium acetobutylicum # 2 156 3 157 158 127 55.0 1e-29 MEAKKKLLTYAGLKALEDELENLKVVKRKEVAGKIKEAREQGDLSENAEYDAAKDEQRDI EARIEELEGILKNAEVVVEDEVDFDKINVGCAVKVFDKTFDEEMEFKIVGSTEANSLEGK ISNESPVGQALMGKKVGDTVKVETQAGEMAYKVLEISRSM >gi|224461045|gb|GG657759.1| GENE 1930 2020422 - 2021384 613 320 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 3 309 29 335 353 240 41 2e-61 MKKIGNIELENPYILAPMAGVTDLPFRLLCKEQGAGLLCMEMVSAKALQYNNKNTKLLLA IHPEEYPVSLQLFGSDPRIMSEAAKRIEELPFQILDINMGCPVPKVVRNGEGSALMKDPG LIYDIVHETVKAIDKPVTVKIRKGFDDEHVNAVEAARVIEEAGAAAVAVHGRTREQYYAG KADWDIIRKVKEAVSIPVIGNGDVVSGPSSAAMQEQTGCDMVMIGRAAQGNPWIFRELRA YAADGTVLPRPAEAEVRQTMLKHAKMQMEYKGEYLGIREMRKHVAWYTKGLKGASKLRAQ INSVESYEELKHLLFERPAG >gi|224461045|gb|GG657759.1| GENE 1931 2021362 - 2022135 963 257 aa, chain - ## HITS:1 COG:lin0253 KEGG:ns NR:ns ## COG: lin0253 COG1521 # Protein_GI_number: 16799330 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Listeria innocua # 1 255 1 254 259 238 48.0 7e-63 MLLVIDVGNTNITLGVFKEDELLGTFRMTTKQPRTSDEYGITLKELVERQGILSTDISAV IIASVVPDIMHSLGSSIIKYFGIKPIVVSAGIKTGIRIVTENPRQVGSDRIVDAVAAYTL HGGPVIVLDFGTATTYDVVGIDGTFEAGVTAPGIRTSAQALWGGAAMLPAIEIKKPDSIM AKETISSMQAGLVFGQIGQTEYIVNRIKEESGYMDAKVVATGGLGKIIAAETDVIDIYDS QLTLKGLRIIYEKNRKH >gi|224461045|gb|GG657759.1| GENE 1932 2022145 - 2022474 508 109 aa, chain - ## HITS:1 COG:no KEGG:Closa_1095 NR:ns ## KEGG: Closa_1095 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 4 109 6 111 118 124 63.0 1e-27 MYENKVVLCGANSYEEKYYLNPDFEQLPGKIKDELKIMCVLYVNDVGGILTLVYEEDAEL CFEVTSEEGDPMFDEIGSQLKIKELQREKQELLAALQLYYRVFFLGEDV >gi|224461045|gb|GG657759.1| GENE 1933 2022467 - 2023447 1005 326 aa, chain - ## HITS:1 COG:BH1685_2 KEGG:ns NR:ns ## COG: BH1685_2 COG0340 # Protein_GI_number: 15614248 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Bacillus halodurans # 69 319 1 252 254 176 38.0 6e-44 MKTEILKVLRESGGYVSGQQLCDSFGVSRTAVWKVIEQLKKEGYEIEAVRSRGYRLVESP DVMGQAELESLIRTRWAGRPVVYASETDSTNIQAKALGEKGASHGTLFVADRQTAGKGRR GRSWESPAGTSIYMTVLLRPGFLPSRAPMLTLVMALSVAEGITGETGLLAQIKWPNDIVV NRKKVCGILTEMSAEVDYINYVVTGAGINVNTECFPREIAGTATSLYIEGGARVRRAKLA ARIMERYEENYETFLAAEDLSGLKSAYNRLLVNRGKEVRILEPGNEYEAVASGINDTGEL IVTARDGSRRAIFAGEVSVRGVYGYV >gi|224461045|gb|GG657759.1| GENE 1934 2023457 - 2025502 2173 681 aa, chain - ## HITS:1 COG:VC2508 KEGG:ns NR:ns ## COG: VC2508 COG0078 # Protein_GI_number: 15642504 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Vibrio cholerae # 371 679 4 333 334 379 58.0 1e-105 MELKPIIDLSKEYGLVFDGGGARGAYQIGAWKALREAGVKLNAVAGTSVGALNGALVCMG DMEKAEDIWSKMTFSSVMDVDDEWMERLFRKETTIREFLNEGWSRLKDGGIDITPLKELI HEVIDEEKIRNSSIEFCLLTFSVSDFKELDLSVEDIPEGLLEEFLLASAYLIGFKNERLH GKKYIDGGVINNVPLSSLVKRGYENIIEVRIYGPGREPRVKMPETGVKYEIGPRVKLGSI IEFSGRRSRQNMKIGYFDAKRMLYGLEGFIYYVEQTYDDHYYEKLMSGIKEIEKAETAFA LKLSFGHSDKELFMGMLEAAAKLLRVPKYQIYTVDQLYDIVYNKYEILGDKLHLPRFVHI LTGLREERKMNLKGRSFLTLKDFTPEEIVYLLDLAADLKEKKKQGITGNSLQGKNIALIF EKPSTRTRCAFTVGAADEGGNPTYLAGSEIQLGHKESIEDTARVLGRMFDGIEFRGFSQA HVEALAKYSGVPVWNGLTDEYHPTQILADLLTMREHFGYLKGLKFAYLGDGRNNMANSLM IGCAKVGVDFINVAPKALWPTEELTDLCKKYAAESGASITITDDVNDVEGADVLYTDVWA SMGEEDKAAERIEMLRPYQINKEMMARTKKEGTIFMHCLPAVKGKEVTEDVFEGDASVVF DEAENRLHTIKAVMVATLGNI >gi|224461045|gb|GG657759.1| GENE 1935 2025517 - 2026464 1189 315 aa, chain - ## HITS:1 COG:FN1549 KEGG:ns NR:ns ## COG: FN1549 COG0330 # Protein_GI_number: 19704881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Fusobacterium nucleatum # 11 307 8 293 294 306 58.0 2e-83 MGALIGKITGIVVIVIVVLILISCIRIVRQAQALVIERLGAYQATWSTGLHVKLPIVDRV ARKVDMKEQVVDFAPQPVITKDNVTMRIDTVVFYQITDPKLFCYGVANPIMAIENLTATT LRNIIGDLELDQTLTSRETINTKMRSSLDVATDPWGIKVNRVELKNIIPPAAIQDAMEKQ MKAERERREAILRAEGEKKSTILVAEGHKESAILDAEAEKQAAILRAEAKKEAMIREAEG EAEAILKVQQANANGIEFLKEAGADEAVLTLKSLEAFERAADGKATKIIIPSEIQSIAGL VKSLAEVGQKDEAQE >gi|224461045|gb|GG657759.1| GENE 1936 2026464 - 2026904 719 146 aa, chain - ## HITS:1 COG:TM0865 KEGG:ns NR:ns ## COG: TM0865 COG1585 # Protein_GI_number: 15643628 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Thermotoga maritima # 4 140 5 138 140 73 36.0 1e-13 MQTMYWLILFVILLIVEILTMGLTTIWFAGGALVAFAAGVLGFGTAVQIIVFVVVSVILL IVTRPIAVKYFNKERQKTNAESLIGQQALVLEDIDTLQSKGRVEINGQEWAAKTDEPEGR IEKNTVVVVEGIQGVKLIVRAREEKA >gi|224461045|gb|GG657759.1| GENE 1937 2026975 - 2027766 264 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 47 262 27 248 255 106 28 6e-21 MITSTGNQKVKRLVNLRKKRKARDEEKVFLVEGIRMFREVPAERLLEAYVSESFYKREGG TVSRVLEGCAVRPEILSDTVYDYVSDTKTPQGVLCVVRQKEYTFAEAAGGERAHILVLDN LQDPGNMGTVIRTAEGAGVTGIVMSSECVDVYNPKTIRSTMGSVYRMPLYRAKDLTEAVR RMKESGIHTYAAHLDGVLSYDEADLTKPCAFFIGNEGSGLREEVAALADTYIRIPMEGEV ESLNAATAAAVLMFEAARQRRQQ >gi|224461045|gb|GG657759.1| GENE 1938 2027779 - 2028429 920 216 aa, chain - ## HITS:1 COG:SA0939 KEGG:ns NR:ns ## COG: SA0939 COG0569 # Protein_GI_number: 15926674 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Staphylococcus aureus N315 # 1 215 1 215 220 176 41.0 2e-44 MTKQYAVFGLGSFGSSVAVTLQNLGCEVVVVDNRMERIQEIADDVSYAIQADMQDQEVIR SLGARNLDGVIIAVSEDMEASVMATIISKELGVPYVLAKARNEMHAKILRKLGADAVVFP ERETGERIAKNLVSTNFADWIALSPEYSITEVAVPDGWTGKSLQELDVRRSHDVSVVGVV SGDKVEVNPDPNKPLEQGMVLILVGANEALESFQKG >gi|224461045|gb|GG657759.1| GENE 1939 2028479 - 2029822 1740 447 aa, chain - ## HITS:1 COG:DR1668 KEGG:ns NR:ns ## COG: DR1668 COG0168 # Protein_GI_number: 15806671 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Deinococcus radiodurans # 2 447 74 512 512 276 38.0 7e-74 MQLLTLGFLGVILLGGILLWLPICNEKPIAFADALFTSTTAVCVTGLVTITPAVQFTLLG KIILLILIQIGGLGVIACATAFFLILRKKITVRERVVIQETYNMDRIGGMVGMVRRAILG TLLVEAAGAVLYAVQFVPEFGVAKGIWYSVFHAVSAFCNAGIDILGSSSLMDYVTNPLIN ITTMLLIILSGIGFTVWTDVISNSRKIYKNEVPKKWWFTRLALHSKIAIVTTLILLVLGT VAVFGLEYHNPDTIGNMTVGEKVMASMFQSVTTRTAGFATISQGGLHTESKLVCSMLMFI GGSPGGTAGGVKTTTVAMLVLACFTFVRGGRDTECFGRRIDNANIRTGFFVVLVAFTAFL AGVTAITVIEPERVPFIGILYEASSAIGTVGLTADLTPHLSRASQAVIMVMMYLGRLGPI TLALLFGGKVHPRDKIRRLPERRIIVG >gi|224461045|gb|GG657759.1| GENE 1940 2030086 - 2030775 1048 229 aa, chain - ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 228 1 229 230 316 68.0 3e-86 MSKILIVEDEEAIADLEKDYLELSGFHVEVANDGELGLKKALEEDYDLFILDLMLPGVDG FDICRQVRNVKNTPIIMVSAKKDDIDKIRGLGLGADDYMTKPFSPSELVARVKAHLARYD RLTGSAAEVNNIIEIRGLKIDTTARRVWVNGEERTFTTKEFDLLTFLASHPNHVYTKEEL FREIWDMESIGDIATVTVHIKKIREKVEMDTSNPQYIETIWGVGYRFKV >gi|224461045|gb|GG657759.1| GENE 1941 2030768 - 2032264 1819 498 aa, chain - ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 489 1 492 498 369 39.0 1e-102 MKLKTRLIIAFLTVILIPVLLTYLMVCGLSRYQINSIEKTYEITGTTVKSFANSMQVLSR LTEKPYHELYEMAKEDSEQLEDATCLEKFNKKLEKKKAYLLVRKGTTIIYMGTDIDNVNH VIPQLPSYGESGNTSENGVYLGGEAQALVKQVDFLYGDGEQGSAFIVTDVSNMIPEVQEF IVDLVMGILMVLVLTALLLIFWIYRAVMQPLGKMQCAAQNIKEGNLDFELRPAADDELGR LCRDLEEMRKRLKDNAEEKVKYDKESKELISNISHDLKTPVTAIKGYAEGIMDGVADTPE KMDKYIRTIYNKANEMDLLINELTLYSKIDTNRIPYNFNTLSVNEYFNDCAEDLSLEMES KNVEFGYFNYVASGVQVIADAEQIKRVIHNIVNNSLKYMDKSKGKINLRVKDVGDFIQVE VEDNGKGIAAKDLPNIFDRFYRTDASRNSSKGGSGIGLSIVKKIIEEHGGKIWATSREET GTTMYFVLRKYQEVPIHE >gi|224461045|gb|GG657759.1| GENE 1942 2032343 - 2033530 1411 395 aa, chain - ## HITS:1 COG:BS_metK KEGG:ns NR:ns ## COG: BS_metK COG0192 # Protein_GI_number: 16080107 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus subtilis # 3 393 5 395 400 602 73.0 1e-172 MEKRLFTSESVTEGHPDKMCDQISDAILDALMEQDPMSRVACETSTTTGLVLVMGEITTN AYVDIQKIVRDTVREVGYTRGKYGFDCETCGVITAIDEQSPDIALGVDKALEAKENRMSD AEIEAIGAGDQGMMFGYATDETPELMPYPIALAHRLARKLTEVRKDGTLSYLRPDGKTQV TVEYDDKGAPVRLDAVVLSTQHDPDVTQEQIHEDIKKYVFDAVIPSGMADEETKFFINPT GRFVIGGPHGDSGLTGRKIIVDTYGGMARHGGGAFSGKDCTKVDRSAAYAARYAAKNIVA AGLAQRCEIQLSYAIGVAHPTSVMVDTFGTGKLEDDRLVEIIRENFDLRPAGIIKMLDLR RPIYRQTAAYGHFGRTDIELPWEKTDKAAELSRYL >gi|224461045|gb|GG657759.1| GENE 1943 2033836 - 2035053 1442 405 aa, chain - ## HITS:1 COG:AF0367 KEGG:ns NR:ns ## COG: AF0367 COG0477 # Protein_GI_number: 11497979 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Archaeoglobus fulgidus # 6 392 3 387 397 129 26.0 2e-29 MKKGTNRYFILAVAAVVNFVHGNPYIWTVFQPHVRSEYDLSLAASSQPFTLIIGIFAVGN MIGGYLQHKIGARATILGGSFVMCAGFFLAAAAPYNMPWLISAGYGVLGGLGSGCAFSML VAVPQEWFPDKRGLVTGITVGIVGISGVIMNPFCDWLLSAYGYRAAMMTTAAVYAVLSLG GIFISEPGPKQDGEPGPKPVEYEKAQEAEAPGKRQYTTREMFCTKTYYLVSVSMALAVPA YVLVNPLMKSLGMERGLTDSAALAGVMAASAANIAGRFAAPWVSDFLGRKTVIQVLYVIA MISVVGLTAAKGGLFILLISLVSLTYGGFVSVFPVLTSDCFGMRYQGMNFGAVMLGYGIV SILCPYLLAAVQSTPLGTNLSFIAAGGVCVIGMAVTARIKIQQKC >gi|224461045|gb|GG657759.1| GENE 1944 2035163 - 2036455 1383 430 aa, chain - ## HITS:1 COG:CAC3539 KEGG:ns NR:ns ## COG: CAC3539 COG0766 # Protein_GI_number: 15896775 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Clostridium acetobutylicum # 1 411 1 411 418 440 56.0 1e-123 MEQYIIKGGHPLVGEVEIGGAKNAALAILAAAIMTDDTVLIDNIPDVNDVNVLLDAITGI GAKVHRVDRHTVKINGSGIRNYDVEYDYIKKIRASYYLLGALLGKYKRAEVALPGGCNIG SRPIDQHLKGFRALGADVDIEHGKVVAEAEKLVGRHVYFDVVTVGATINVMMAATMAEGI TIMENVAKEPHVVDVANFLNSMGANIRGAGTDVIKIRGVHRLHGTEYSVIPDQIEAGTFM FAAAATKGDVTVLNVIPKHLEATIAKLTEIGCEVEEFDDAVRVVSKGDLTSTHVKTLPYP GFPTDMQPQIGVTLALCKGTSTITESIFENRFKYLDELARMGANIKVEGNSATIEGVEQF SGARVSAPDLRAGAALCIAGLATDGITIVDDIIYILRGYERFDEKLRSIGALMEQVSTEK EIQKFTLKVS >gi|224461045|gb|GG657759.1| GENE 1945 2036615 - 2037115 651 166 aa, chain - ## HITS:1 COG:MA3237 KEGG:ns NR:ns ## COG: MA3237 COG0703 # Protein_GI_number: 20092053 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Methanosarcina acetivorans str.C2A # 3 163 8 166 175 124 41.0 7e-29 MENIIFIGMPAVGKSTVGVVVAKRLGYQFIDTDLLIQEKEGKLLREIIEKKGIDGFLEVE DRVNAEVEADNTVISPGGSVVYCKNAMKHYKEIGTVVYLKASYETINKRLKSAKNRGVVL RDGQTLRHLYDERVPLFEKYADITVCEDGLKLEDTIEKVIGALQSA >gi|224461045|gb|GG657759.1| GENE 1946 2037239 - 2037595 361 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569875|ref|ZP_03778900.1| ## NR: gi|225569875|ref|ZP_03778900.1| hypothetical protein CLOHYLEM_05969 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05969 [Clostridium hylemonae DSM 15053] # 1 118 1 118 118 191 100.0 2e-47 MDNRLPYYMAYPMPLLYDDDKVARRDLDYMKSLYPAAAKRLIPYIEDECDRLEYEGSMMY DEYPDQLQLRLMCRRIYDRAEEDEEVPGKWLHDLIQVMAYQELCRRRCEHRNMRRKYY >gi|224461045|gb|GG657759.1| GENE 1947 2037913 - 2038572 774 219 aa, chain - ## HITS:1 COG:FN1733 KEGG:ns NR:ns ## COG: FN1733 COG1394 # Protein_GI_number: 19705054 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Fusobacterium nucleatum # 1 212 1 211 211 174 50.0 1e-43 MASTQVTPTRMELTKTKKKLVTAVKGHKLLKDKRDELMRQFLDLVRENMELRLKVEAGIR SANKNFVIAKAGMDEATLNTALMAPKQEVNLEVDKKNVMSVNIPVFETKTRTADANDIYS YGFAFTSSDLDGAVKSLADILPDMLKLAETEKACQLMAVEIEKTRRRVNALEHVIIPEAQ KNIKYITMKLDENERSSQIRLMKVKDMMLEEAHHYSEKA >gi|224461045|gb|GG657759.1| GENE 1948 2038891 - 2040264 1472 457 aa, chain - ## HITS:1 COG:FN1734 KEGG:ns NR:ns ## COG: FN1734 COG1156 # Protein_GI_number: 19705055 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Fusobacterium nucleatum # 1 453 1 453 458 677 72.0 0 MPKEYRTIQEVAGPLMLVRGVENVAYDELGEIELASGEKRRCKVLEINGNDALVQLFESA TGINLSNSKVRFLGRSMELGVSGDMLGRVFDGLGRPIDDGPEILPEERRDINGLPMNPAA RSYPEEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDENFAVV FAAMGITFEESNFFVESFKETGAIDRTVLFVNLANDPAIERISTPRMALTAAEYLAFEKD MHVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTDLASLYERAGRQNGKKGSITM IPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRKGIQPPIDVLPSLSRLKDKGIGEGK TRGDHSNTLNQLFAAYARGKDAKELMTILGEAALTDIDLLYAKFADAFEKEYVSQGYGTD RSIEETLEIGWKLLSMLPRAELKRIDDKFLDQYYGKQ >gi|224461045|gb|GG657759.1| GENE 1949 2040268 - 2042034 1711 588 aa, chain - ## HITS:1 COG:MJ0217 KEGG:ns NR:ns ## COG: MJ0217 COG1155 # Protein_GI_number: 15668390 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Methanococcus jannaschii # 4 575 12 590 594 733 62.0 0 MSTGTIKKVAGPLVIAEGMRDANMFDVVRVSNQRLIGEIIEMHGDEASIQVYEETSGLGP GEPVESMEVPMSVELGPGLIASIYDGIQRPLDDIMKVSGNSLQRGVEVASLKRDKKWEFV PVAKAGDEVEAGDVLGTVQETIVVQQKIMVPYGIKGTVKEIRQGEFTVEETVAVIATEDG DKELTMLQRWPVRKGRPYVKKLPPEKPLVTGQRVVDTFFPIAKGGVAAVPGPFGSGKTVI QHQLAKWAEADIVVYIGCGERGNEMTDVLNEFPELKDPKTGQSLMQRTVLIANTSDMPVA AREASIYTGITIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGEEGYPAYLGSR LAQFYERAGHVISLGQDKREGALSVIGAVSPPGGDISEPVSQATLRIVKVFWGLDSALAY KRHFPAINWLTSYSLYVDNMADWFNNEVAADWMEDRQKMMSLLQEEAELDEIVKMVGMDA LSPTDRLKMEAARSIREDFLHQNSFHDIDTYTSLRKQYLMMKLVLAFYEEASEALSQGAS MQILINMGVRERIGRYKYTLDADIETEYEKIVNELHTEIAGAFGKEDF >gi|224461045|gb|GG657759.1| GENE 1950 2042062 - 2042382 444 106 aa, chain - ## HITS:1 COG:FN1737 KEGG:ns NR:ns ## COG: FN1737 COG1436 # Protein_GI_number: 19705058 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit F # Organism: Fusobacterium nucleatum # 1 102 4 105 105 86 42.0 1e-17 MYKIAVLGDYDSIYGFATLGLDTFPVSTREEAGEKLHQLTLGDYGIIYVTEALAAELKHE IEKYQEQAVPAVIQIPGISGNTGAGVEGVKKSVEQAVGSDIIFGNE >gi|224461045|gb|GG657759.1| GENE 1951 2042375 - 2043343 743 322 aa, chain - ## HITS:1 COG:FN1738 KEGG:ns NR:ns ## COG: FN1738 COG1527 # Protein_GI_number: 19705059 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Fusobacterium nucleatum # 3 322 5 334 334 90 25.0 3e-18 MSEQYTYAVARIRALEVSLFSNSTVDQLIACADYGQCIQFLQEKGWGDSDTPADAEAILN REEEKIWEVVKELSVDMDKFDVLSYPKLFHNLKAAIKEVCTEEENRHIFYEDVAIPGKVM LEIVREKDFGKLPRNMQAAAEEAYETLLHTRDGQLCDVIIDRAALEAVYEAGQQAEDDII RDYAESTVGVADIKIAVRSQKTAKSLEFMKRAMAECASINVDQLAKAALSGMDAIREYLS GTAYAEGAEALADSPSAFERWCDNRIIQTISPQKYNAFTIGPVIAYVIARQNEIKTVRII LSGKLNDLPDDSIRERVREMYV >gi|224461045|gb|GG657759.1| GENE 1952 2043377 - 2043970 661 197 aa, chain - ## HITS:1 COG:MJ0220 KEGG:ns NR:ns ## COG: MJ0220 COG1390 # Protein_GI_number: 15668393 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit E # Organism: Methanococcus jannaschii # 1 119 3 122 206 66 41.0 3e-11 MTGLDKMKSQILDEAKAAADSKLSEAKSQAEDILDKAKAEAAKTTSSISQKSEAEVANYK DRIVSAIDLQRRTKILAAKQEIIAEVLDKAYGTLKTMESGAYFDMLLKLLGKYALPQEGE IYFSSADLERLPDGFEQKINGIAAEKGGRLTLSKTGRNIENGFILAYGGIEENCTLKAMF DAKKDELSDQVHKLLFL >gi|224461045|gb|GG657759.1| GENE 1953 2044012 - 2044497 700 161 aa, chain - ## HITS:1 COG:FN1740 KEGG:ns NR:ns ## COG: FN1740 COG0636 # Protein_GI_number: 19705061 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 4 159 9 158 160 109 43.0 2e-24 MSIWNDLGIVYALLGAAVAVFLAGAGSAIGVGIAGQAASGVVTEDPSKFAKVLIMQLLPG TQGIYGLLVGFITLSKIGLLGGGAADISVTTGLLVLAACLPIGIVGLISGKYQGKTSAAA IGIIAKKPDQFGKAMLFPAMVETYAILALLISILSVTAISV >gi|224461045|gb|GG657759.1| GENE 1954 2044497 - 2046515 2439 672 aa, chain - ## HITS:1 COG:FN1741 KEGG:ns NR:ns ## COG: FN1741 COG1269 # Protein_GI_number: 19705062 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Fusobacterium nucleatum # 1 658 1 636 638 236 28.0 1e-61 MAVLQMQRISICALKKDRKAILEKVQSMGVMEINHVVEDDEAFGRMDTLNARQSFDKKAQ LADQALAVLDNYAPEKSSMLSSLEGKKLVEQEKFSKAAADKEKIIAAANRLVGCSKEIAE NKANILKLENQIESLTPWLTLDVPMDHQGTENVAVLVGMMPGGLTLDGVYARIAEQNPDL EAVDVHIIASDKDAVYLTVLCLKAEEALVEEALRTAGFARPSQVTDKVPARLKTELEAEI LKLNKRIEKKEAEIVGFADSREQLKLISDYFRIRSEKYEVLGTLPQSQRTFVMSGYATAE AVPAVQKTIGEKFDCVIDVEDLKEDEEAPTVLKNNSFSSSMEGIVASYGLPHKGEFDPTT IMSFFYVFFFGLMLSDAAYGAIMAIVCFVLLKKYPRMSEGMHKSIKMFMFCGFSTLFWGV LFGGYFGDVIPVFSEKFFGTAVNIKELWFVPLNDPMRLLIYSMLFGMIHLFIGLGIKGYM YLKDGKVLDFFCDVILWYVFLIGLILMLLPSDIFASIAQAEINFPPALNTLAKALAIIGA AGLLFMSGRANKNPALRIALGAYDLYNITGWLSDVLSYSRLLALGLATGVIASVINQMAS MIGSGIIGVIAFIIVFIIGHTLNMAINLLGAYVHTNRLQFVEFFSKFYEGGGKPFEPFHS DTKYVDIKEETL >gi|224461045|gb|GG657759.1| GENE 1955 2046554 - 2046862 329 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569885|ref|ZP_03778910.1| ## NR: gi|225569885|ref|ZP_03778910.1| hypothetical protein CLOHYLEM_05979 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05979 [Clostridium hylemonae DSM 15053] # 1 102 1 102 102 88 100.0 2e-16 MVEETIKAIKETEREAEEIVKNADTECTSILEKASADAGRIKEEAEAEAKAKAKASLQAA KEAGETEAEKALAEVETEIASLKEAARQKEGDAISAVIAELV >gi|224461045|gb|GG657759.1| GENE 1956 2046856 - 2046954 72 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVDNILVDFSMESYYNFNYREFQLREVVNRW >gi|224461045|gb|GG657759.1| GENE 1957 2047024 - 2047515 451 163 aa, chain - ## HITS:1 COG:FN0809 KEGG:ns NR:ns ## COG: FN0809 COG0219 # Protein_GI_number: 19704144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Fusobacterium nucleatum # 2 149 1 148 150 185 60.0 4e-47 MLNIVLHEPEIPANTGNIGRTCVAANARLHLIEPLGFRLNEKNLRRAGMDYWDELDVTTY IDFDEFLEKNEGARIYMATTKAPNVYTDVRYEPDCYIMFGKESAGIPEEILVKHKEDSIR IPMAGDIRSLNLGNSVAIILYEALRQNGFAGMNKEGHLHRLTW >gi|224461045|gb|GG657759.1| GENE 1958 2047702 - 2048607 1061 301 aa, chain - ## HITS:1 COG:PAB0403 KEGG:ns NR:ns ## COG: PAB0403 COG0309 # Protein_GI_number: 14520803 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Pyrococcus abyssi # 19 294 47 326 326 114 29.0 2e-25 MEGNGHKMMSTKLQGERAVSATAFACGQSKEIGVHALAESLNELAAAGAGAVEARVHIMI PDGYGRPRLAAVQKLIEKACGARGVTLIFLEQYKTPAAALPLVSVTCTGTAEYTDRVIRP GQDIVLTKWAGLGGMVRILQEKEDELEERFAPAFIKQIKEYAGEIFAGEELPAARQMGVS VFCQVTEGGIFAALWNLAREAETGLSVDMKKIPVRQETIEVCENYRLNPYQLMSAGSFLM VADNGRELARELTGRGMKAAVIGRMTDNNDKVIQNGEEIRFIDRPAPDELNKILGHTKRG E >gi|224461045|gb|GG657759.1| GENE 1959 2048610 - 2050088 1711 492 aa, chain - ## HITS:1 COG:CAC0691 KEGG:ns NR:ns ## COG: CAC0691 COG2720 # Protein_GI_number: 15893979 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Clostridium acetobutylicum # 39 438 38 411 411 136 29.0 8e-32 MRILFGLAVLCAVVVTGISYFVLYRYVSDVPENKICGNIYIGNVNVSGRTKKEAKKLMEQ HLKEDAALEITMKVGDKSAGATLEELGLAYKDIGKVVDKAVEYGKKGRLFTRYRQIKGLE KEKLVLNEGFVLDAEKTKAVIEERVEVLAEHAKDAGITKSADGFDITKEKKGETVDEKAS AEMIRKYLNSGWDHKGFKVKMAVKTEEPSVKASDLESIKDELGSFSTDAGGGERWKNLKA GVDRINGSILMPGEELSVHDTTAPYDAEHGYVEAGSYENGQVVDSYGGGICQVSTTLYNA VLYAELEVLERYPHSMLVAYVDPSRDAAIAGDYLDLRFKNSYDTPIFIAAEIDSANQMRF TIYGKDTRADGRTVEYESETLTTEDYGVTYKENKEAELGSMQYAGSPHTGKTARLWKVVY ENGAEVSRDVINNSTYEKSDQIVEVGTMSDNAEAAELVRKAIASQDKAAIEAAVAQAKGM SAAGSDNAGEEN >gi|224461045|gb|GG657759.1| GENE 1960 2050174 - 2050278 187 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFNDRRVKRIIAIVIMVIVIAMIATMTIPYLMA >gi|224461045|gb|GG657759.1| GENE 1961 2050310 - 2050936 202 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 14 207 20 217 378 82 27 9e-14 MKKRTKEILEILDEQYGTDFICYLNHDSPWQLLIATMLSAQCTDARVNIVTEGLFKKYTS VEAFAQADLKELEQDIKPTGFYHTKARNIIACMKEIRDRFGGEVPRELEELVSLAGVGRK TANVIRGNIYHEPSVVVDTHVKRISNRLGLTENNDPEKIEQDLMKELPRDHWILYNIQII TFGRSVCTARKPKCRDCFLQKYCKEYKI >gi|224461045|gb|GG657759.1| GENE 1962 2050972 - 2052711 1382 579 aa, chain - ## HITS:1 COG:CAC1021 KEGG:ns NR:ns ## COG: CAC1021 COG1032 # Protein_GI_number: 15894308 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 2 552 3 526 548 369 38.0 1e-102 MKILLTAINAKYIHSNLAVHSLKAYAQSYCVPREGSLPLSTDTAEYTINQQPDELLMDLY RRKPDVICFSCYIWNIAFVEELVTELKKVLPQTHIWLGGPEVSYDAVKVLERLPGVCGVM KGEGEETFAQLCRIYCGAGAQGVPDSLSSVKGITYRDSGGGIAENPWRDVLDLSAVPFVY KDMELFRHKIVYYESSRGCPFSCSYCLSSVDKRLRFRDTALVKQELQFFIDARVPQVKFV DRTFNCNHRHAMEIWTYISEHDNGITNFHFEIAADLLNEEELDLFGKMRPGLIQLEIGIQ STNPCTVKEIRRTMDFEKAAHTVRRIRDNGNIHQHLDLIAGLPYEDMESFKRSFDDVYAL RPDQLQLGFLKVLKGSYMEQQKEAYGLVHKSSPCYEVLRTKWLSYGDVLRLKGIEEMVEV YYNSGQYTRTLERLIEEFDSPFDMFDRLRKFYEEKDHMNVQHRRSARYEILLSFISSCCE EKTEYYRELLVFDYYLRENAKTRPEFAGDHMLTKEQLREFYEKEEKERKYLEGYEASDRN QLRRMTHLERFTCLGKTVLFDYMQRNPLNQEARTCMIDM >gi|224461045|gb|GG657759.1| GENE 1963 2052686 - 2053699 974 337 aa, chain - ## HITS:1 COG:no KEGG:BCG9842_B1002 NR:ns ## KEGG: BCG9842_B1002 # Name: not_defined # Def: putative lipase/acylhydrolase # Organism: B.cereus_G9842 # Pathway: not_defined # 35 274 51 254 259 72 24.0 3e-11 MLRLRDIFTKITVSVMITVFVSVCCEGEVRAAQPQKLWYLAVGDSIANGYSCDDKEISPY PELVRRQYARKKGIPVELTNIAKNGLSTARFNASKLGEQDVSECIRTADIITVTIGANDL IDAFKTACQDVLGREERFWNMSDAVEMLHAEMKAHPMLVLKAVAVIADWDYDAFEENYCT MMDGITGEAKPSVRMVVTDIYNPTAGLGMPGTLDMVVDSIIGKMNSIIRDHAAEYGYRVV GLEEAGISSHIQKDGLHPTEDGQQLIADAVLRELELMEQDPEGTPEPGTSGGRGVHAGLW DIMALSGMAVTGILLIILGVWKGKRREKEDENITDGN >gi|224461045|gb|GG657759.1| GENE 1964 2054206 - 2054685 508 159 aa, chain - ## HITS:1 COG:BH0033 KEGG:ns NR:ns ## COG: BH0033 COG0590 # Protein_GI_number: 15612596 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Bacillus halodurans # 1 155 1 155 159 180 55.0 1e-45 MNSVDEKFMKEAIKQAGKAYALNETPIGCVIVYEGRIIGRGYNRRNTDKNTLAHAEITAI RKASRKMGDWRLEGCTLYVTLEPCPMCAGAIVQSRMDRVVVGCMNPKAGCAGSVLNVLQT EGFNHQTELTTGVCGGECSSMMKSFFRELREAKKKKKNL >gi|224461045|gb|GG657759.1| GENE 1965 2054722 - 2055816 713 364 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0291 NR:ns ## KEGG: EUBREC_0291 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 255 358 141 249 253 69 35.0 2e-10 MKRFIRYLYEYENGRRMRNVGFVKVDQSDGECIVHIHGKGLRLEGEKELTIYLFYEKEKE CIGLPQGTVENVNPAVNYQLRYTKEDVGEPGNYDRIEGIIMENSSHRKYAAVWDDMPVNV NEMRLWTPADLTEGSGEEERVEERPETEEPAEGRMSEPAPQREEAEEEMPAGNEAEEESE NFPPEEEIPAEMEASEEEENAEYAGAEESECEESETEEESVRTEQVETVEEAEIEEAECR SRTACGPCRQAQPVRPKPVCREQEKKCTKIQRQDIVNLPRCEWRLSNNSFLLHGYYNYHH LVLIEEDGNMWLGVPGIYHPKEAKAAEAFGFPQFIKAEKIDVDLEEEERNDGEDFGYWCR HIRR >gi|224461045|gb|GG657759.1| GENE 1966 2055877 - 2057304 1429 475 aa, chain - ## HITS:1 COG:lin2806 KEGG:ns NR:ns ## COG: lin2806 COG0232 # Protein_GI_number: 16801867 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Listeria innocua # 1 474 1 464 465 423 46.0 1e-118 MNWEQLLSTKRSRGASNKNKYTKSTDLRSEFEKDYHRIIGSASFRRLQDKTQVFPLDKSD FIRTRLTHSLEVSSLAKSLGQNIGENILVYRKDSGFTPGMKEDICSILQCAGLIHDIGNP PFGHFGETAIREWFERNLPVLSYHGQPVDKVLTPQMRQDFYNFEGNAQALRLVTKLHFLV DEQGMNLTYALLNTIVKYPVSSVGIDKQSGNIKDKKMGYYFADEDIFEEIAAQTGTNGLR HPLTFILEAADDIAYKTADIEDAFIKGFITYYSLLEELKELQEQYAGGARSAFRPAEKLE DLYRRGKEKHVNDPEEYAIKNWIVRVQGFLISCATYGFTSHYEAIMEGTYAYDLFHQTFA EKLMDLLGDMAFRKVFTSETIYRMEVAEAAMIDFLMDKFVTAVIHYDDPGEKLSSIDLRM VSFISSNYKNAYHYHAEGKPDIERLYLRLLLVTDYICGMTDSYAKRLYQELKAII >gi|224461045|gb|GG657759.1| GENE 1967 2057339 - 2058361 1172 340 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569897|ref|ZP_03778922.1| ## NR: gi|225569897|ref|ZP_03778922.1| hypothetical protein CLOHYLEM_05992 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05992 [Clostridium hylemonae DSM 15053] # 1 340 1 340 340 475 100.0 1e-132 MLDLTFGEQVKIILSRRGMTIKELAETIEERTGKKMSRQNLTQRLGRDNFQEQDMRMIAE ILECPFTLSILEDNDSQEKTSNYKKEEKKVTSAPVAEEKDEEKEDRQTAPERDITIGELV EIHEELDALIEEETGELPPLETPVEELLEEVAALEAEERERDSGEEKDRMSGPEEEKRAH GWMSYLQRRRKKPEHNAGQTEPESEEDIHGMREVYAESSQEYAEDTAGTEPEQMEEPEQA EEPDAPYVDYGGAEEPDEMYAQPEVDYDDEDRVNGDVNPYTGHEYETNSVRMHPNRIGYV QVYDREEHAWTDMTEWAFLGYQERKKALLGKDYEPPIYLD >gi|224461045|gb|GG657759.1| GENE 1968 2058548 - 2060296 1374 582 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 20 452 37 467 1087 80 24.0 9e-15 MKQLKTRWADKLEKDHVLKEYPRPSLRRKSYVNLNGIWNYAFSDSRKRPDTFEGEILVPF SPEAVLSGVGRQLRPGEYLWYGRKLPDEVKKEQGKRWILHIGAADQCAAVMVNGRPAVRH VGGYIPFSADVTDLLGAAENELTVRIQDHSDRVFLARGKQKLERGGMFYTAQSGIWQTVW MEQVPDDHIYGIKITPRYDEGEVEVLVRSRRERGVVFTVCSGETQAAGAEGCTNRPVRIP LKEIHRWSPEDPFLYRLRIRMGEDEAESYFAMRKISAERDQRGIPRLFLNNRPYFQKGVL DQGYWPDGLYTAPSDEAMIFDIMEMKRLGFNMLRKHMKIEPERWYYHCDRLGMLVWQDMV CGGAPYRHWYVTYAATAMELFHIRPSDRYYRLLGRRDVKSRARFMQEMKETVRALYNHPS IVVWVIFNEGWGQFDANAVTEAARREDASRLLDSASGWFDQGGGDFWSIHNYFFPLKVRP EKRVAALTEFGGYCLKVKGHSMCPGMYGYRIYGSRKELGRGYASLMGREVAAQIDRGLSA SVYTQLSDVEEEVNGIYTYDREVLKIDENIIKKCNEKLVIKE >gi|224461045|gb|GG657759.1| GENE 1969 2060334 - 2060975 541 213 aa, chain - ## HITS:1 COG:BS_sfpm KEGG:ns NR:ns ## COG: BS_sfpm COG2091 # Protein_GI_number: 16081163 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Bacillus subtilis # 67 213 86 224 224 74 31.0 2e-13 MIRTYLADITPLLERDTYEQCCGLVPDWRRRKAQRMRFAEGRAQSIGAWLLLEAARKETG AGGSHVYNLSHSGSYVMCALSDTAEAVRAGCDIETVKDAKMGVARRFFTESEYERLLEEE DGQKRADLFFRFWVLKESFMKATRQGMKLGMDEFEIGFDEQNRPVLLRQPAAFLEKYRYT EYNIEGTGAKMAVCTTAEVTAKEAKVVDFNHII >gi|224461045|gb|GG657759.1| GENE 1970 2060993 - 2061193 266 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569900|ref|ZP_03778925.1| ## NR: gi|225569900|ref|ZP_03778925.1| hypothetical protein CLOHYLEM_05995 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05995 [Clostridium hylemonae DSM 15053] # 1 66 1 66 66 99 100.0 7e-20 MDREKEKKLEAFETMYQAVRTEYDRILKRLEILKGDGRDNSAEYKELSGRKTIYGSILDL YKIYDL >gi|224461045|gb|GG657759.1| GENE 1971 2061407 - 2062420 1294 337 aa, chain + ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 337 1 337 337 422 59.0 1e-118 MIIVLKPNTKQEDVSRVEHLVKRRGLDTHIVVGQEMTIIGCIGDTTKIDAKLFEVDASVD KVMHVQEPYKLANRAFHPEDSVVDVSGVKVGRGHLALIAGPCSVESAQQVLEIAAAAKQS GANLLRGGAFKPRTSPYSFQGMGLDGLKILCEAKEATGLPIVTELMSPEHLDIFNEKVDL IQIGARNMQNFDLLKQLGQLDRPILLKRGLNATYEEWIMSAEYIMASGNENVILCERGIR TFETYTRNTLDLQSIPVLRKLTHLPVVVDPSHAGGKWWLVEPMAKAAIAAGADGLMVEVH NDPESALCDGAQSLKPQKYDELLREVTQIAKVIGKKI >gi|224461045|gb|GG657759.1| GENE 1972 2062442 - 2063503 862 353 aa, chain + ## HITS:1 COG:CAC0894 KEGG:ns NR:ns ## COG: CAC0894 COG0337 # Protein_GI_number: 15894181 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Clostridium acetobutylicum # 3 338 4 341 356 317 48.0 3e-86 MKLNVNLGDKSYPIYIENKILDSASDYIADAFSGKKIMIFSDDNVYPLYGEALKRSLSGR FECHEFILPHGEATKAFKTLPAVYSALLDARLTRSDLIIALGGGVIGDLAGFAAATYMRG VNLIQIPTSLLAQVDSSVGGKVAVDLPQGKNLVGAFYQPCLVLIDPLVLNTLSPRFIKDG MGEVIKYGCIRDADLFHTLESHSSFEDLKEELPAIIYSCVDIKRKVVEHDQFDTGERMLL NFGHTLAHTIEQYHHYERESHGEAVAVGMYQITRLAQEQCLTAPGNADRILKLLKQYGLP YECGIPLSELTDTIELDKKNLNDRLNVVLLREIGNSYIHPATIDFFKRNLRTI >gi|224461045|gb|GG657759.1| GENE 1973 2063524 - 2064267 914 247 aa, chain + ## HITS:1 COG:TM1724 KEGG:ns NR:ns ## COG: TM1724 COG1028 # Protein_GI_number: 15644471 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Thermotoga maritima # 1 243 1 240 246 140 37.0 3e-33 MRLEGKIAIVTGAGKGIGRDAALAIAAEGATVVAVARTLADLEETVRLIEEKGGKAIALS RDLTIGEQVQSMADTVVEKFGRIDILVNNAGGYPKEIYNNIEHQAIKIWEWSEEQWDQII KTNLRIPFLCINKVVPVMIKQRSGDIVSVSSRMGRIASQMGAYAVAKGGIITMTKTTAIQ TQEYGIRANAVSPGIVDTPGQRVYNHSVGQDDAKMGRSEDVAKAIVYLLCDAPAVMTGQS VDLFTTV >gi|224461045|gb|GG657759.1| GENE 1974 2064330 - 2065424 861 364 aa, chain - ## HITS:1 COG:BH0491 KEGG:ns NR:ns ## COG: BH0491 COG0006 # Protein_GI_number: 15613054 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Bacillus halodurans # 7 361 7 354 360 143 28.0 4e-34 MTDFEIKLERIRHLLDRRQADALVIARRDNFAWLTGGEESGVILNQETGFVYLVVTRKEL TAAALWADAAKAKEELLAGLGFTVHTLNWKQPGKEQYIERLLKGKKALSDIPLEGCLCDT EAVYELEYPMTETEIERYRELGRLSDRILADTAGNIKRGMTEQEIKAELLRQCADRGVET DVLLVGADERIEKYRHCTPTEKAAEHTALLSPVLRRYGLHSNIARMVCFGSVPEEVREKY DAVCQIQAEIISMSREGIPFGEIFQMQERSYRQLGYGQEWMRHGHGAPVGYMLSDASVLY NSGRRMMPGQAYEWYVTVSGAKSAELVMNTGGRQEILSMTGLWPEKEYRTSNGDVIKLPD IWII >gi|224461045|gb|GG657759.1| GENE 1975 2065421 - 2066854 1387 477 aa, chain - ## HITS:1 COG:TM0951 KEGG:ns NR:ns ## COG: TM0951 COG2407 # Protein_GI_number: 15643713 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Thermotoga maritima # 8 473 6 470 471 444 48.0 1e-124 MKRLHTGFGVIVSTRGFFNPELAHEGRVEILEKLKSMGYDTVCLDESDTRYGLVETMDDA GKCADLFKENADRIQGIIVCLPNFGDEVGVVSAIDKAGLNVPVLVQACDDEKDKMDIAGR RDAFCGKISVCSNLNQYGIKFTNTTFHTCAIDSDIFTEDIRDFAKVCRITAGLKGLRVAQ MGTRPAAFQTVRYSEKLLQKMGIQVVPVDMSEIIFAAKRLEMTEEVAEAAARIKSYGRLE DSVEEEHIVKQAKLYVTVKNWMKENDCQTGTIQCWDSLQINYGCAACLTMSMLGEEGMPM ACEADVTGAVTMYAMYLASGSPSGYLDWNNSFGEDRDMCIGIHCSNFPKSFISGPFEIGS LDILGNSLGKENCFGACKAVIAPGTMTYGKISTDEEKGKVKMYVGEGSFVEEEIDTPGGV AVCKVPGLQALMDHICSSGFEHHVAMNRGNSAKVLAEALGKYMGAEVYYHKGEEARK >gi|224461045|gb|GG657759.1| GENE 1976 2066861 - 2068405 1724 514 aa, chain - ## HITS:1 COG:TM0284 KEGG:ns NR:ns ## COG: TM0284 COG1070 # Protein_GI_number: 15643053 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 4 502 2 501 506 313 35.0 4e-85 MNSYFMGLDYGTGGCKVCIINEKADVLAYAYRKYDIITNQDNYSEHDVHDYWPATCSMIK ECMSKADVKPEDIRGIGTSSALPSLVMVDKEGEPVHNAYNLMDRRADRQEQWLKEHIGAD EIFRLTGNRIEDHPILVNLLWEKENRPEDYKRIYKALTIDGYIRMKLTGRMTAHHSAGVF YGVAYDLDNNRFDEGMLRRLGIEASVLPEFFRCEDIVGEVTGEAAKETGLVPGIEVAGGQ VDCNAGWIGAGATEVGDIQMNLGTCGNMGIVRNTKEKFRDMFNLQYTTDCTNTYITVTTT QTGGQCLRYMKENFAKLETAMEELIPDFDSYDYLNMEADKIPPGSEGLVVLPYLMGERTP IWDNDARGVVFGLSLYHTKAHLVRAMMEGVAYALYDSFIILKESGIKINYPLVMNEGGAK SRLWRRIITDVLNVPTVFVKNRVGAPYGDALLAAVATGCMKDFSIAKEKAEYVEPMEPIE ENHETYMKYFKIYRNLYRHVKEDFKDLKELRKQV >gi|224461045|gb|GG657759.1| GENE 1977 2068398 - 2069075 605 225 aa, chain - ## HITS:1 COG:PM1364 KEGG:ns NR:ns ## COG: PM1364 COG0235 # Protein_GI_number: 15603229 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pasteurella multocida # 4 181 2 180 210 109 34.0 3e-24 MCKTEMQQKEDIEEVGRALYDKGLLVGTDGNISIRLSEQEVLITASGFCKGKLTADQITK VDMEGHVLEGKKPARDIRMHLAVYRECPEARAVVHAHPPVTTGYAMSEVSFEKVALPEVL FSLKGIAVTDYTTPTTIEVPREVSRVLREKPQSRTILLANHGALTISSNVYDAFYMMETL EMFMKADLVSRLLGTTRYLDSRQMDKVNRLIKGEDADSVAEVRYE >gi|224461045|gb|GG657759.1| GENE 1978 2069225 - 2070091 822 288 aa, chain - ## HITS:1 COG:BH2675 KEGG:ns NR:ns ## COG: BH2675 COG1737 # Protein_GI_number: 15615238 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 12 276 15 275 287 135 31.0 6e-32 MQKISSKVKAEITAIYDTLRGAERKAADYVLLHPQEAALHSIITESAGRAGCSEATFVRL AQKLGYNGYAQLKQMLLPAEAAFEPETLLPYGDIGRGEDSQAVLCSVFHAAARALDDTLD LLDRKVYEESLSYITRAGKILSAGAGDAYTAAYSAYLKFSRIGLRAVCPADFDVQIMEAS GMKRGDVLLLISHSGSTRTLCQVAETAKAKKARIITVTNYPLSPLAKLSDCVIRTAAFTK NPCNETVAKRIPELCIIEALYISILQGREEKYAKMLAAANEELRKNKF >gi|224461045|gb|GG657759.1| GENE 1979 2070072 - 2071598 1289 508 aa, chain - ## HITS:1 COG:AF1752 KEGG:ns NR:ns ## COG: AF1752 COG1070 # Protein_GI_number: 11499341 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Archaeoglobus fulgidus # 2 485 10 483 493 259 34.0 1e-68 MLLGIDVGTTGAKAMVFTEEGGTRGYAFREYGILYTKEGYACQDAEKVWEITKEVIREAV REEGQNIRSISVSVQGDAVIPVDRDRAALAWAQLGMDYRGREEARMCADRFGACEIFSRT GMRPHPMNSFIKILWIKRHDERLYEKTYKFVTYADFIMGKLGSSEIVIDYTMAGRTQAFD LSGRTWSKEILKAFDIQEEKLGTPVPSGTVVGTIDRDLAEELGICPGAALVAGGHDQTCA AVGAGITEEGMALDSHGTAEVLTAVSEGPKLGSVMFDSFYPCYIHALPGLYATFALNHTG GALLRWFVEEYCREDRRIAAAEGISVYDHVMEKLPDGPSHVMVLPYLNGSGTPYCDLEMK GGILGLTLATGRYDIAKAVLEALCFEMRLNMDQMKEAGIAVRTVRCAGGGARSRTGLKLK ADIMGVPVTTLKVREAACFGAAILAGRGAGLYRSAADIQSLVQTDVTYEPEKARKDMYDE RYLVYRGLYRTMKPVMARVGEHNAENIQ >gi|224461045|gb|GG657759.1| GENE 1980 2071582 - 2072994 1314 470 aa, chain - ## HITS:1 COG:TM0951 KEGG:ns NR:ns ## COG: TM0951 COG2407 # Protein_GI_number: 15643713 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Thermotoga maritima # 50 446 50 456 471 138 25.0 3e-32 MDHRVVIGYAPTRRRIFSAQDAVKYKKMIADRLREWEVEFVDIEDINEEGLLRSAEDVQP VIDKFSRAKVDALFIPHCNFGSEHSCGKVAAALHVPVLLWGPRDEAPEPDGSRLRDTQCG LFATGKVLRRMKVPFTYVPNCRVDSPQFEKGFKNFVAAANVIKEFRRGRILQIDTRPADF WTMMVNEGELLEKFGIQVFPITMVEFADKVLELEASDSAEVEETERYIYEHMDVCIPKES VRRVASLKEAMKYFARVNECNAVAIQCWDALQQALHVMPCCANALLTDEGIPVVCETDIH GAVTAIMVQAAGMGRTPCFFADWSVRHPENENGELLQHCGPWPISLAREKAKLSRPFAFP EHCPGAVVAELKPGEISILRFDGDNGTYGMLMGKARTIDGPKTTGTYAWVEIPNWPKVET MLVKGPYVHHAVGIHGDVIPVICEALNYIPDVRADFYDEDQERETYAAWN >gi|224461045|gb|GG657759.1| GENE 1981 2073024 - 2074322 1605 432 aa, chain - ## HITS:1 COG:BH0774 KEGG:ns NR:ns ## COG: BH0774 COG4091 # Protein_GI_number: 15613337 # Func_class: E Amino acid transport and metabolism # Function: Predicted homoserine dehydrogenase # Organism: Bacillus halodurans # 1 428 1 427 439 374 47.0 1e-103 MYEIDTKLEELERAGTPVRTALIGAGQMGKDIVAQIEGMKGIECDIVVDVRADIAAEAYR QAGCQCEVVEVHTAGEAEKAIAAGKKAVTTDYKTAVQAAQITNVIDATGSPEMGARVTME CILHKKHIVMMNVECDITIGPLLRRLCEQAGIVYSLTAGDEPGSIIEVYRFAKALGFEVV AAGKGKNNPLDIYADPGMHKWKEKAAKRDMNPRMLIEFVDGSKTMIEMCAVSNATGLKPD VRGMHGPECNVKDLARVFSLKEQGGILDQTGVVDYGIGDINPGVFVIVTTDNKRIIDGLV QRDMGEGPNYLLYRPYHLCSIETPITAVQAAVYGESTAHPMDHLTSECITVAKKDLKAGE VLDAIGEYCYRASIELAETAREGNMLPVGLAKGAVLKRDIKKDEVITYDMVELDNRSVLL QLRRMQDEMTGC >gi|224461045|gb|GG657759.1| GENE 1982 2074370 - 2075419 1332 349 aa, chain - ## HITS:1 COG:BS_gutB KEGG:ns NR:ns ## COG: BS_gutB COG1063 # Protein_GI_number: 16077682 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Bacillus subtilis # 5 347 9 351 353 167 34.0 3e-41 MKGMMKAAVFKGIEHMEIESLEIPSCPDGGLLVKVAVCGICGGDIRNYRSGLRNGKTDQI MGHEIAGEVVEVSEGVSRFAAGDRVALAPDVSCGECYYCRRGLVNLCDDHRMLGTHFSGG FAQYIAIPKIVLERGFVEHIPDDMSYDHAAFAEPVSGVAACQEYNRISYGDTVVVIGDGP IGCLHMEVAKARGAFRTVMLARGRMEQARKFGFEHLICNKDPKEAAEKVKALIGPGADVV ICAVPNAAAQQQALELVKKRGRVVIYGGLPGSSPMTTLDSNKIHYNEIMVLGAFSYSSTG LEDALRTIEEGKISTGKYLSAKVSLEEIVGGIQMVTRGEALKVLVDPWA >gi|224461045|gb|GG657759.1| GENE 1983 2075379 - 2076200 662 273 aa, chain - ## HITS:1 COG:lin0502 KEGG:ns NR:ns ## COG: lin0502 COG0794 # Protein_GI_number: 16799577 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Listeria innocua # 58 257 1 200 200 227 57.0 2e-59 MVSHPRFLFKKKYASVKNSPYFLKNLPLKNKSGCDKLQNIERNFSLIYEKNENGGMAMDR KDIISEVKRTILEESEAIRALSGQLDMEKAARLVELIGDGKGKVVVAGCGTSAMAARKVV HSLNCIECTAVFLTPSDAVHGGLGVLKENDILILISKGGNTEELVQLIPPCRSKGAVLVG VTEDEASKIGKAADLCLQVKAGREPCRFNMLATASTLAVLSVFDAVCIALMQYTEYTKEQ FAVIHPKGAVGERLLGKEDPDERYDEGGRIQRH >gi|224461045|gb|GG657759.1| GENE 1984 2076420 - 2077256 741 278 aa, chain + ## HITS:1 COG:no KEGG:CLH_2455 NR:ns ## KEGG: CLH_2455 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 10 273 5 272 272 134 37.0 4e-30 MNKRQKLIPLNSLNLTDRFLFEEVMEDPLIHKEVLSIIFGREIPLLEKNETEKELRISPE ARSVRMDVFSMDMEKTVYNTEMQKQRRADLSRRSRYYQSLTDISLLDPGIPDYSTLNDSY IIMITPFDLFGCGKYQYTFRSVCEEEPQCILEDGATRIFLNTRGRNEDEVSAELVQFLHY VEHTTDEAAEQTGSERIKHIHDRVRKVRNSEEVGVKYMQAWEEKYYEKEEARKEGARNKL KEQIKKKLEKGKTVDEIADALEESADSIQTLIKELEGD >gi|224461045|gb|GG657759.1| GENE 1985 2077344 - 2078978 1458 544 aa, chain - ## HITS:1 COG:BH3842 KEGG:ns NR:ns ## COG: BH3842 COG4753 # Protein_GI_number: 15616404 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 1 543 1 524 530 135 22.0 3e-31 MYAALVVDDEEIIRRGICRKLERFFPQLKLAPPQENALEALHYIQTNQVDIVYVDIRMPL VDGLEFISRARQYNPYLQFVVISGYTNFEYARTALQLEVKDYLLKPIDNGEFREVTARLI KELDEKKEQIRDRRHVKSQAEEGKFLKKSRYLTELVRADSSMDTVELEKDLEEMGIRFTD TYHRVLAVIVQDIRSVPGFEDVSGLAVLQFAVCNIMDEVFLHCGCTSFVHEKGENQFIII LNTETSLAAHFLREKAHHLLNVLKSIYGLDAAAGIGKEVRRTEDLCVSYAEALESGLRCS MLGLSEVEICEGTKQKRLEMRLLNEFDKNILEGYIKSQNEAGIRQFVDEMLSRVKKEGLT YTNVKIMCLDIYMLAAKLLAEKGKDTETAVKMLERLDRQAVKNTALEEFRKYLEQTLCVI SRQFDDRKKSSGKTLITDILAYVDEHYSKDVSLGTIAGKFFINPSYLSQLFKKEMNMKFI DYITDVRIKKALVLLETTSLTVNEVAEAVGYKDTRYFREIFVKHMGKTPSQYRMEGAGGG TQEI >gi|224461045|gb|GG657759.1| GENE 1986 2078992 - 2080797 1877 601 aa, chain - ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 2 599 3 592 602 216 26.0 1e-55 MKIIKYKDLKMKNKLFIGFILVIAVLVSLLGYFSMTFSEQSIRTQMLDSIQETMNQMGEN IEGEIQKVLDVSAQVCLNEELCTVLQEEKPGTIEEYYSKDKTMRQILNESYAAYFSVEDV FVCSYNGSVYGSDKNKLSLTADYDFTRTGWFADMKQSGAGVSILSQYDSSSYISTGEPQK LFSIVKKIYNYRSGKEIGCLIVHMNSDILGNVLQSVNSNEYQQCLIIDNNKKIIYHPDSD YIGTQYREARVSELLTMENGYMESLSEKGYLVFSTSAVTGWSVISVVDNKYIMDSINRLR LFLILTAVFCVVLSVYFASYISKTISDPVARLQRKMYQVGEGDFDIRAATGASDEIGQLT LSFDKMVERTKQLIENVYQSEIYQKEAELNALQAQINPHFLYNTLQTIDMMAEEEGADEI SDACQALSKIFRYSINRGQEFVHVQDEIVHIENYMLIQKLRFGGKLEVRYDIQNECRELY IVKLLIQPMVENAVVHGMENVLDKCYVTIRVYRKEDCLYAEVEDNGTGIAPGQLMELNEK LARSAEQKMVHEVDYVKNHRSIGLENTNARIKLYFGQEYGITITSEEGTGTKVCIKLPVR T >gi|224461045|gb|GG657759.1| GENE 1987 2080946 - 2082202 865 418 aa, chain + ## HITS:1 COG:no KEGG:Cbei_0732 NR:ns ## KEGG: Cbei_0732 # Name: not_defined # Def: extracellular solute-binding protein # Organism: C.beijerinckii # Pathway: ABC transporters [PATH:cbe02010] # 1 386 1 383 416 82 23.0 5e-14 MHKKLVTKILLAVSGACAVISLGFLYSYLNSSPKTSKETYSINILTYKDIPLSTLDGFHN KYPDYKINIERYSKNGYLSFLDARLNQDDSADIIEIPAEAYSKYIYNNTLLPITDMDAFT RIDERALDHLKEISRSDKYFGIPYQSNYLGVWYNVSLFEKYKLEPPDTLQRFMKACRVFK ENGIVPLSAGLADSASANDLMTLLTADAFSGAGSPVTASSGFRGLEDPVHLDALRICYDM RTEGYLSDTGLRLTGEQAFQAFLDSTYAMTVAPETYISMVNDSVLQQIDIDVCGFYPAAG SGQSFVIGNPVDSVIGICKESANIDICRTFLDYYTRYETVFQYIEDTRTMTNIQNYSVNE TLTASWKKIKSQNCYIPAEHFYLSPYTGGRELHSLPQELFYHLITPEEFTQKALDLSH >gi|224461045|gb|GG657759.1| GENE 1988 2082215 - 2083228 1117 337 aa, chain + ## HITS:1 COG:BH3448 KEGG:ns NR:ns ## COG: BH3448 COG1879 # Protein_GI_number: 15616010 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 3 335 2 335 335 124 26.0 4e-28 MKKNKLLLPLILTGLLCLVLLSAIMTQKQSADTLPDTKDTSQSEEYIWVATMTGHSMFQE NDIPAFRQFGADRHVTTTILGPEEYDIPGQIQAMEEAISRSPAGIVVLGMEQSLAPVIDK AIRQGIPVVTVDSDVSTSKRIAFAGSDWYEIGVTQAEAMVRLIGGKGKVAVMGIGGADTT EAAFEGYHSVIDNYPDITVIGEYDDMANYDESERITKLIVETHPDVAGISGFNSNSAIGI TNGLRSSSADHDIKVTAMDIEPDNLELVESGDVDVIIGQKRAVFTYYAASMLYDINHSSI TVNNLAKGAASVIPDTVYTGLITVNRENLYTYFPDMK >gi|224461045|gb|GG657759.1| GENE 1989 2083280 - 2084272 1293 330 aa, chain - ## HITS:1 COG:PM1327 KEGG:ns NR:ns ## COG: PM1327 COG1172 # Protein_GI_number: 15603192 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Pasteurella multocida # 29 310 31 331 347 153 37.0 5e-37 MKSKESVNRLLFKNIPLLLFVIIFVLFGLFSPKFLSMASFSNIILNSSYVGIIGIGIMFV LLTAGIDLSVGSVMYLSAASTGLLIARFHVPTAVGVCAGIGVALLVGLFNAFCIIKLKIL PFVTTLGTMTAGRALGTWMTHSESVNLPKSITSLGSQKIAGIPMAILLFLLIAAAAALFL ARTRLGRQVYAVGNDPEDARKAGISNNKILFTVYMLSALLAGIGGIISVAQIGIVNASFG KGEEFNAIAAAVLGGTSLAGGSGKVSGTILGAVMIQMIQSGLVYMQVDMYIQPLISAGII FLAVFLDSIRGRYMAKAEARNIRNENLVRE >gi|224461045|gb|GG657759.1| GENE 1990 2084274 - 2085794 202 506 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 275 479 20 217 245 82 27 9e-14 MSEYVLQLEHIAKSFFGIAALKDVSFGLEKGELLSLIGENGAGKSTLMNIVGGVLKADSG KLYLNGDPYEPQKPSDAAKAGIAFIHQELNLFTNLSIIDNMYINSYPRIPGTPLIRKSAV ADKVKEVLSSVDLDVPPETIVEKLSPGERQLVEIAKALSSDPQIFIFDEPTTSLTARETR KLFDIIERLLKEGKSIIYISHILADVQRLSDHIIVLRDGMITDRDKKENYTVNRMISSMI GREIDQLYPEKTNRPAKEPVLELKDISQKGITHKVSMKVYKGEVVGMFGLMGSGRSELAR IVYGLDPYEEGKIFIHGREIRKISPRLAIKNKVAFVTENRREEGLFMDFTIRDNLSLVSV PEKARTKLKIVDDSSVKQSTQDMVETLKIKCPPIGTNPAKSMSGGNQQKVVIGKWLLGSP DLLIVDEPTRGIDVGAKFEVYSIINKLASEGKGIWVISSELEELMGICDRIIIMGNGEVR GELKREEFDKEVIMKAAFNQNGKGDE >gi|224461045|gb|GG657759.1| GENE 1991 2085796 - 2086902 1311 368 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 36 355 39 330 330 153 32.0 7e-37 MGVFNKKTQIKGGKRNAKQMIMNMFMSEYFIFYLTVICFICVIPFVPRIITRSNLLNVMS NLWPLLVVAVGQTFVLLLGGIDLSQVSVIGVTSVIGTVLMSSSFQEDIFSSTPLWGWLIG PKGGPLSDSGMAIPLCILAMLVIGTLIGMFNGFFVARFKMPPFMVTLVTQMFLLNFAIFL TQSRNVMGLPKGFKELGKGSLGGIIPYAAVLTVTVTVIAWFILKKLVLGKWIYSTGANET ASIVSGVPTKTVTVFCYAFSGFCAAAGSAIYSARLNMGRPTLGEDLTMDIVGAAVLGGTS LLGGKGKVTWTVFGVLFYTILFNALNLFNLSYYTINIVKGFVILAAAFLDVVRTRLAVKM TTQNEAGV >gi|224461045|gb|GG657759.1| GENE 1992 2086974 - 2088008 1235 344 aa, chain - ## HITS:1 COG:AGc3486 KEGG:ns NR:ns ## COG: AGc3486 COG1879 # Protein_GI_number: 15889195 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 40 312 67 324 347 88 24.0 2e-17 MKKLLSVLLAAAMMAALLMGCADKKESKDSKDGGSKDVTIAFSFEDLETEFWVAAHEIIT DTLKDEGYKVIELNCQGDANKQLEQVNDALTQDIDGIIMIPVDGDTAVTVTAAANESEVP IVIFNRPPTSDEGSNITVVCDNATTAEATVDYMVEQAKAKFEKTGKKLTPCILVGDLGDP NAIERKNGFYAAVEKEKDIFNEVIEVPTEWDAATALANLQSAVQANPDIDFIFSSSDFLF PTIQSVVEPLGKWQKAGDDGHIILGGLDGDSTAGKLIDEGYVDATGVQDLFYEADAAMNG IIKAIEDGETTPDEIVEDPGFALTQGNLAEKRMDMWGNAVSAEK >gi|224461045|gb|GG657759.1| GENE 1993 2088170 - 2089201 1163 343 aa, chain - ## HITS:1 COG:SP0034 KEGG:ns NR:ns ## COG: SP0034 COG2855 # Protein_GI_number: 15899980 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 343 1 336 336 326 58.0 5e-89 MEFVKKNWKGMLVCIAIAVPSWFLGKQFPIIGGPVIAILAGMVITLFIKEKGSLESGIKF TSKKILQYAVVLLGFGLNLRVILETGRQSLPIIIATISTSLIIAYVLHRALHIPGKISTL VGVGSSICGGSAIAATAPVIDADDEEVAQAISVIFFFNVLAAVLFPMLGTALGFSSSSGE AFGIFAGTAVNDTSSVTAAASTWDSMFGLGSATLDKAVTVKLTRTLAIIPITLVLAFIRT RKAEKEAAGKVSLKQVFPFFILYFIGASVITTVAVSAGISAEVFMPLKELSKFFIIMAMA AIGLHTNIIKLVKTGGKPILMGMACWIGITLVSLIMQHTLGLW >gi|224461045|gb|GG657759.1| GENE 1994 2089374 - 2090252 867 292 aa, chain + ## HITS:1 COG:CAC0093 KEGG:ns NR:ns ## COG: CAC0093 COG0583 # Protein_GI_number: 15893389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 7 290 6 290 290 129 32.0 7e-30 MLDNRTETFLAVCHEMSFTKAARTLHVSQPAVSQHIQYLEDYYGTKLFRFEGKKIFLTDA GELLRKSFTALRNNEIYLREQLSMLQNKRNTLRLGATLTVGEYMISDPLIRYLSSHPDSD ITVTVANTKKLLSSLDDGKIDFALLEGDYPHASYRHQTYRQEQFIPVCSQSHAFIRRPET LCDLTSESLIIREPGSGTRKIMEQALEDADITLKDFANVITIGNMNTIKELVTADCGITF LYKTAVKKELEDGILKEIELTSPGITHEISIVWKKNNLFEASFEQLFNELFF >gi|224461045|gb|GG657759.1| GENE 1995 2090253 - 2090669 464 138 aa, chain - ## HITS:1 COG:BH3753 KEGG:ns NR:ns ## COG: BH3753 COG0355 # Protein_GI_number: 15616315 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Bacillus halodurans # 1 128 1 128 133 79 37.0 2e-15 MNTFFLKIICSDKVFFEGRCQNVILPTPDGQKGVLAHHENMVVAVEIGELRFQTKEGEWN TAVVSKGFAEIINNRVSVLVNAAERPEDIDVLRAREAKERAQERLRQKQSIQEYYLSQAS LARAMTRLRASKSGKKYI >gi|224461045|gb|GG657759.1| GENE 1996 2090673 - 2092067 1418 464 aa, chain - ## HITS:1 COG:CAC2865 KEGG:ns NR:ns ## COG: CAC2865 COG0055 # Protein_GI_number: 15896119 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Clostridium acetobutylicum # 4 462 6 462 466 623 70.0 1e-178 MVKGRIVQVMGPVVDVEFDSREDLPFIKDALEVDNNGRRSVMEVAQHTGNNTARCIMLAS SDGLYRGMEVTATGAGIKVPVGEQTLGRLFNVLGETIDGKEAIDSGSRRWEIHRKAPGFE EQSPAVEVLETGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFT GVGERSREGNDLWTEMGESGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQN VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLAQEMGALQERIASTKNGSVTSVQAV YVPADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYRV ARKVQEILQKYKELQDIIAILGMEELSEEDKRTVSRARKIQKFLSQPFSVAETFTGVKGR YVPLKDTVRGFKAIIDGEMDEYPENAFFNVGTIEEAAEKAKKEV >gi|224461045|gb|GG657759.1| GENE 1997 2092078 - 2092974 1042 298 aa, chain - ## HITS:1 COG:BH3755 KEGG:ns NR:ns ## COG: BH3755 COG0224 # Protein_GI_number: 15616317 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Bacillus halodurans # 1 294 1 283 285 155 32.0 9e-38 MANARELKERMAGIQETKKITNAMYLISSSKMKQARKKLADTEPFFYAMQAEIARILRHV PDMHSHFFDGREKTPPERRKTGCIVITADKGLAGAYNHNVIKLAQEKLKEPGEHRLFVLG ELGRQFFSKQDGLEVDTDFRYTVQNPTMHRARLITVKMTELFETGELDDIYIIYTRMKNA MQAEAEMIKLLPLKRLDFTPENIPYLSGVYREEITLYPSAHSVMDSIVPNYINGIIYGCL VEAYCSEQNSRMQAMQNATDSASQMLSELNMTYNRVRQADITQELTEVIGGANAQKRK >gi|224461045|gb|GG657759.1| GENE 1998 2092987 - 2094492 1412 501 aa, chain - ## HITS:1 COG:CAC2867 KEGG:ns NR:ns ## COG: CAC2867 COG0056 # Protein_GI_number: 15896121 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Clostridium acetobutylicum # 4 499 3 498 505 577 57.0 1e-164 MSAISSDEIISILREEIENYDMVCRDRETGFVVSVGDGIATVYGIDHAMYGEIITLETGL KGMVQDIRQNEISCILFGDDSDIKEGTKAARTGKRAGVPVGEKYIGRIVDALGAPIDGLG GIEADDYRPVEQEAPGIVERRSVSVPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIA VDTILNQKGKDVICIYVAIGQKASTVAQLVNTLRSYGALDYTTVFCSTASECAPLQYIVP YSATALAEYFMYQGKDVLIVYDDLSKHAVAYRAISLLLGRSPGREAYPGDVFYLHSRLLE RSSRLSEEAGGGSITALPVIETQAGNVSAYIPTNVISITDGQIFLESDLFNAGMRPAVNV GLSVSRVGGAAQTKAMKKASGSVRIDLAQAREMESFTQFSSDLDDATKMQLKYGACLTEL LKQPLCRPLSLSEQVITLCAATHKAMLDVDTKDIKEFQMGMLRYIEKKYPEIGKEIEEKQ ALDDELTDRIIKAAEEYKENR >gi|224461045|gb|GG657759.1| GENE 1999 2094498 - 2095031 558 177 aa, chain - ## HITS:1 COG:no KEGG:Closa_4167 NR:ns ## KEGG: Closa_4167 # Name: not_defined # Def: ATP synthase F1, delta subunit # Organism: C.saccharolyticum # Pathway: Oxidative phosphorylation [PATH:csh00190]; Metabolic pathways [PATH:csh01100] # 15 177 5 167 167 120 39.0 3e-26 MKTGKTRRGRRTMTAVRYAAVLDELAVPQEELDRTVQILDSCPELKGMLESPVISKAQRG RVIDRVFPECVRNFLKAAADRGGIGEVAESIDIYREQRLKKAGIITAGLIYAEPPDAERL KKMEQFICRQYGASGVRWEMEENTSLIGGFTLRVNGREYDYSVLGRLKGLEQKLTWR >gi|224461045|gb|GG657759.1| GENE 2000 2095012 - 2095512 574 166 aa, chain - ## HITS:1 COG:SA1909 KEGG:ns NR:ns ## COG: SA1909 COG0711 # Protein_GI_number: 15927681 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Staphylococcus aureus N315 # 8 159 21 172 173 71 26.0 9e-13 MLRLDFNLVLEMINLLVLFLLLRRFLIRPITNIMEKREAMIADGLNNARSEQEKALELKR QYEDSLRGAREESRKMLEQAGLDAKDEYDRIVSDADDRADKMLRSARDAISAEREQTMLR MKTEAAKLAMDAAKKIVTGYGGPDDSQSAYDLFLEEAGDSHEDRED >gi|224461045|gb|GG657759.1| GENE 2001 2095528 - 2095755 339 75 aa, chain - ## HITS:1 COG:FN0363 KEGG:ns NR:ns ## COG: FN0363 COG0636 # Protein_GI_number: 19703705 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 7 72 15 80 89 57 57.0 4e-09 MMGTIIAIGAGVAVLTGLGAGIGIGIATGKATEAIARQPEAEGKISKTLILGCALAEATA IYGFIIALLIVFFLK >gi|224461045|gb|GG657759.1| GENE 2002 2095788 - 2096510 868 240 aa, chain - ## HITS:1 COG:CAC2871 KEGG:ns NR:ns ## COG: CAC2871 COG0356 # Protein_GI_number: 15896125 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Clostridium acetobutylicum # 23 240 2 220 221 129 36.0 4e-30 MTEKLDTKEGDNTEELTKNLLEELNCQTVFTIPVFGGIAVDESIVVTWIIMAALTVLSVV FVRNLSVEHPGRVQLALESAIGWAQDFFEGIIGKENKRYIPYLITVALYLAVSNVIGLLG FKPPTKDLNVTAALAVMSMILIEYSGIRRNGGKHWLRHFAEPVPVVAPIMVLEVFIRPLS LCMRLFGNMLGGFVVMELIKLVVPLLVPIPLSFYFDIFDGLLQAYVFVFLTALFMNEEME >gi|224461045|gb|GG657759.1| GENE 2003 2096874 - 2098613 1654 579 aa, chain - ## HITS:1 COG:SMb20389_2 KEGG:ns NR:ns ## COG: SMb20389_2 COG2199 # Protein_GI_number: 16264123 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Sinorhizobium meliloti # 401 565 35 201 204 118 42.0 4e-26 MKDFHSVLNLFISSPGILFLASVVFTFASFYWVRKLLAEFRTSLWPALLAGVFNGSIAVL AELAVDRPTPYLMMAFVPIVTVLELRLVSNDSLWAYLFILSAFLLNFSAVHDLAVAAMGL WSYRDVCSPYSAEYRIGIFTMALLAAAVILLLLARFMPAKEMSSVMHSREKSMMLFSYMA FGSVVLITASAITVPVLFSDSISKKITVPIFHDLILKDLLILGCSYLIALLQCHAERAAQ KNNVLTEELQQEKEFRSAIQRQAIMSYTVNIRKNCIVEGLSYFSNYIKNGGSNNYSRILR EEICENVHPFDRIRVLGESAERSAMGLNQHENSSHAFRFRISRKYLEESAKWTLPETCGC KTDEEWIWVEARIIIVHEEVSDDLIAYVDVMDVSECVEQENELLNAAQIDGVTGLYNRTA LEKYIDIQLSERIVSGAMFIIDMDNFKLVNDSFGHRAGDNLLYEMGNVIRSQFRRRDIIG RIGGDEFCVYAVNLRSIKTIEDKARRLNAAAVRTHVTEQGREFQTTISIGIALCPDFGDA YDSLYEHADIALYQAKRSGKNTFCIYSGEPRTEYSGDRM >gi|224461045|gb|GG657759.1| GENE 2004 2098708 - 2098944 270 78 aa, chain - ## HITS:1 COG:no KEGG:Closa_3433 NR:ns ## KEGG: Closa_3433 # Name: not_defined # Def: carbon storage regulator, CsrA # Organism: C.saccharolyticum # Pathway: Two-component system [PATH:csh02020] # 1 77 1 80 83 68 56.0 5e-11 MLVLQRKKGESLLLGDDIQISVVDIGADTVRLAIEAPKDVKILRKELAEAAIANQEAVAD QEQIQKIKSILSSDRHSV >gi|224461045|gb|GG657759.1| GENE 2005 2098947 - 2099384 397 145 aa, chain - ## HITS:1 COG:BS_yviF KEGG:ns NR:ns ## COG: BS_yviF COG1699 # Protein_GI_number: 16080591 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 12 137 14 138 143 75 36.0 4e-14 MKEDKENCCPYEEAELIRFEDGLFGFESYKCFLPLPITEDSDAVLNLLSVEDESLSFVIM NPFMLMKDYAPRLTEEIYEKLEADKETDLSYYVICVVGSRPEESTVNFKCPIVVNTVSRK AVQVILESEKYHFRHALKDLEKEEV >gi|224461045|gb|GG657759.1| GENE 2006 2099409 - 2100026 765 205 aa, chain - ## HITS:1 COG:no KEGG:Closa_3431 NR:ns ## KEGG: Closa_3431 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 203 1 200 202 198 53.0 1e-49 MDQLLKITTIPIEYELKINDARMERRNGTAELEISRSEGGMNIRSRPIRLHLDTYEARNS VVPTTKTSITQAAQKGHQAAYQATAQFAKEGQILLKTKIGEGGEALQSIFEQRAAAPAGE FQMGFIPTAGPDISWEAPSLSIRYEMDKLNFDLKIDKGDVRFIPGTIELAISQYPDVEIE YMGDPIYVPPSAAAHFTGEVVDVRV >gi|224461045|gb|GG657759.1| GENE 2007 2100061 - 2101056 1074 331 aa, chain - ## HITS:1 COG:no KEGG:Closa_3430 NR:ns ## KEGG: Closa_3430 # Name: not_defined # Def: Flagellin and related hook-associated protein-like protein # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 1 331 1 337 337 267 44.0 5e-70 MRITTNMIRRNYQNNLNSTLSGLEQARRQAETGRRFSKSYEDPSAAAKATILENRYARNG DYRNAVEDTMKWQDTQEDVLMQLGKIAEEVNKNYGVEAVSGTNASVRDTYAATFREMQKS MIYALNTKYGDTFAMAGSDGQNAPFELKEDGTVTYRGLDVNDPANTDALKALSREHSYID LGFGLTFDGGGEIVSSSAFDAAFPGIKAVGFGQSDDGTSNNIIVLMGQMADVLEEDNFDE AAYKKLWTQFDKGAGDLQNCLTEIGTKTKLLSSTKDRLENEKLNITTQFDSTVNINEAEA LMNFSYAQYVYNVALKIGTSLLSNSLLDFMK >gi|224461045|gb|GG657759.1| GENE 2008 2101071 - 2102618 1680 515 aa, chain - ## HITS:1 COG:BS_flgK KEGG:ns NR:ns ## COG: BS_flgK COG1256 # Protein_GI_number: 16080594 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Bacillus subtilis # 4 515 3 507 507 135 26.0 2e-31 MIRSTFAGFTMAQQALSANQRAIDVAGQNLSNINTPGYTRQRLDLASISPVGASFSSSVY DNKVGQGVMMKGISQIRDPFLDIQYRNQIAKVGTADAEDQILERLGEIFDETDSAAVREA FNNVITQLKNMANPQDGGASSTDALVRSSFEVLINAIHEKANAVDALEEEMIKKMTDSVI PNINTCLNEIKNLNEEIKNSQILGNPALELQDERNKLLDDLATYLPIEVSYRTDTSGGEP IDLLDVTFRDSAGTKHTLISDTKIGEFHFDGTGGIPVSLEVTDALNPGGGASDITDLIQN GVLKGNIDMLNKAEIFDGTDTKGIGYYRGMFDAFVNKLATVMNDLNGDALFEKSDGSGAD QPFTASNIKVSEGWMNGTVSIKKSDGAVGGTGPSTEYKNVQLMINALISDKQVFTVKRPD GADVTVFTGTIQNCYDNIQNVQAIERKASASILKNHLTVLNQISDSRDAVSGVNMDEEVM DLMRYHQSYNAASRLMTTMDEMLDKLINDTGVVGR >gi|224461045|gb|GG657759.1| GENE 2009 2102640 - 2103089 567 149 aa, chain - ## HITS:1 COG:no KEGG:Closa_3428 NR:ns ## KEGG: Closa_3428 # Name: not_defined # Def: FlgN family protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 127 1 127 141 96 41.0 4e-19 MNEFAKIIEDLIVLFRELTALESIKLNAGRTDQVSAVEECMTKEQSLVMRLKGLEQAREK KQEELGFGGMRFQEILEHISGADRERFLGLFDSLSREIQMFQEVSEDAARIIEVNIRRLD REIQRREGRLYENSGKEQTEEKHMTDRSV >gi|224461045|gb|GG657759.1| GENE 2010 2103082 - 2103426 315 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569940|ref|ZP_03778965.1| ## NR: gi|225569940|ref|ZP_03778965.1| hypothetical protein CLOHYLEM_06035 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06035 [Clostridium hylemonae DSM 15053] # 1 114 1 114 114 158 100.0 1e-37 MKGAVNMSISIDGNNLSNRYINKLSQAASENRAVQNEKGERKFDEILITANSRQIEEKKI TEELSQKTMSQIMQTTPSEKIEALEKAVSEGRYKVDADALASRILLQKGEGADE >gi|224461045|gb|GG657759.1| GENE 2011 2103477 - 2104802 1318 441 aa, chain - ## HITS:1 COG:no KEGG:Closa_3434 NR:ns ## KEGG: Closa_3434 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 28 378 24 373 429 204 32.0 9e-51 MNEKRIRNYEVKCLLQMLETIISGEELPKWNKQPEWGSLYKLSDYHGVANMVYYAVLGME GEKLAPWKPKFEERFHQAVLAEERYSSAVPELLNELEARKIHAAVLQEYRMRAFYPQQDM RGLKCVSLLVEKGKEEKLGEALAYLDYEKKESRTEGEEWYYKIPGVLIIIRTELPFTNRK MQKYFAVPVKSYEKERGHKYIHTFLPEEYYIHIIGCSAEQYARGSLDIRDMADLWLYYLK VYRDLDWKVINKELEYLKLVEFHVYLIQLAAYWFGGMLFPENDAVFDAMEKYILTKGMQG RKISATLLPLVKEVADFYRKDLKRKRREQMLDWAFPHMDYMNTMFPYLHRAAWLLPVCWL LRLARMGGRQAYVTVAERKRRARRAWEAFWDPKAEAVRSVIGPRIDHLEKKIRNFRRKSF GLAEDVRFKLAKQVQKLKRKT >gi|224461045|gb|GG657759.1| GENE 2012 2104774 - 2105526 871 250 aa, chain - ## HITS:1 COG:CAC0497 KEGG:ns NR:ns ## COG: CAC0497 COG2884 # Protein_GI_number: 15893788 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase involved in cell division # Organism: Clostridium acetobutylicum # 5 228 2 225 228 196 44.0 4e-50 MQKEIKFNHVTKIFGQDTIGLEDASFEIEHGEFVFIVGRSGSGKSTLLKLLSAQLFPTSG EIWVGGCETGRLTSNQLPYYRRQFGIMEAELGLLNDRNVYQNISLAMYATEQPRHLIKKR VEQTLSTVGIAHRSLARPGELSVGEAARALLARAIVMNPKIMVVDEPTANLSPGAAWDMM CLLDELNRLGVTMIVASHARELVSVMKKRVITLVAGAVAADERNAIYDLKRMDIFEEKRI VHEREKNKKL >gi|224461045|gb|GG657759.1| GENE 2013 2105591 - 2106286 378 231 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3539 NR:ns ## KEGG: Cphy_3539 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 60 230 164 336 336 149 42.0 7e-35 MKRCFHVLCACCAAAVCSLPLSASGCFAAVQTPPAGSSPALEAEPGSGKLPPEASGGGYS IPVTVYSQADPSWSSYLYGGRDPMASYGCGPTALAIAVASLTGQNITPADTAAWSYANGY YSPGRGSVHALIPRGAEGYGLKAEKLTPLTPDSFRMALSADKLLILLMGPGDFTDSGHFI VAYGYDDSGNILIADPASQERSSSAWPADTLITQLSRSARDGGPVWVLSKP >gi|224461045|gb|GG657759.1| GENE 2014 2106334 - 2106750 378 138 aa, chain - ## HITS:1 COG:no KEGG:Closa_3436 NR:ns ## KEGG: Closa_3436 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 9 138 1 128 128 65 33.0 1e-09 MSGAYMEGLLTEIIKELRIKYRHMDEICRLTKELADGLSRDDKVTAEMVLEMRGKELEAA AESDRHMSLYIAGARGEDAEKLSDLIGGRMKEEELPDSGSWKEAWNIVEKTMNIWQQTVE TDRVTSTRLAGEDSYYKQ >gi|224461045|gb|GG657759.1| GENE 2015 2106747 - 2107112 491 121 aa, chain - ## HITS:1 COG:no KEGG:Closa_3437 NR:ns ## KEGG: Closa_3437 # Name: not_defined # Def: flagellar protein FliS # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 1 119 1 119 122 125 61.0 4e-28 MNENGYRQYKEQSVMTMTKGELLLVLYDELLKRLKRAELALDTENYVLFEQSAGRSVEIV QYLKDTLNYEYTLSRELSSLYDFFLYELSRLQAGRKKEIIQELQPLVKELRNTFAEAEKA V >gi|224461045|gb|GG657759.1| GENE 2016 2107134 - 2109539 2852 801 aa, chain - ## HITS:1 COG:BH3614 KEGG:ns NR:ns ## COG: BH3614 COG1345 # Protein_GI_number: 15616176 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Bacillus halodurans # 421 799 146 530 532 117 27.0 1e-25 MASISGLGSTSLNSTSSLRGYGGLASGLDRDTLIENMTYATRSKIAAQKQKKQTYQWMQE AIRNITGKVYEFSNTYTSYSSSSNLLGSKLFSRNQVTALGANSSYLSVSGSSVSADTISI LGVKSLAQDAKMTSSNAVSNQIMQTGGISNDLSVETEADVVSGESLFIKYGTKMYSVTLN RGAEYDYSTPEKTAESMNKLLSNISIGNGKTLGDVMEVKENAGRMSFISKDTSGNELKLA GSTGDLLTDLGFMAAGERFELLQDARTVITADGLEAVEDAQVTQTMSLAKQLSGKQISFS YNGSIKWIELDEYDDASTLDDVKNDLQSKLNEAFGRGRIEVGLAADAGDGSKSHLTFKTT LPGGGDDNSSVLSMTAADRGVLGNHSVFGVQGGESNRLNLSASLADSGLVRGGAVDPGRG MTIKNAGGTEIDLRDYGLDWNSSVSEIINKVNETKELGIKITYQSNADRFVVQSTEQGAS GEIDLSGNLADIMFGTRGTDYTTEDGKDAVILVKYAGSGEEMEITRGSNSMTIDGLNITL KGTFGYDSSGNHISDTEAVTFDAQVDVENTAKVVKEMVEAYNEIVKLINSEASQKPNRNY KPLTDEQRDELSESQIEKWETEAKKGLLFNDTDVSAFADGLRFIIPSEMRSQFEKMGITV STNYADNGKIVFDEEAFKAALGENPDAVREAFSKEPEKREDGTVSQGGLMTNMKTIMDRY ASMTGATKGILVERAGSVYAPTTVLKNGLQKKIDDVDDYIDRLTDKLKTEQDRYISQFTS LETLISQMNSQSSYLSSMFAQ >gi|224461045|gb|GG657759.1| GENE 2017 2109626 - 2110288 679 220 aa, chain - ## HITS:1 COG:no KEGG:Closa_3440 NR:ns ## KEGG: Closa_3440 # Name: not_defined # Def: Late competence development protein ComFB # Organism: C.saccharolyticum # Pathway: not_defined # 50 217 115 291 291 95 39.0 2e-18 MARKTNKTDHVLNLLSSGNDKSNTEDSKAAKPQPPVEPDKMASVSVVQPSSEKEQLADAI RLSLEEELEKTQEPETGTDGKEEAQTEDRTEKAAQEKDEKQENRQPETEDAQKQEAVPEE KKEEEPGEDLDFAYVNVMETLVQDRVLEYMEQFGVCTCPRCIADTSALALTQLTPKYVVV SKEAISPLMNFYTKKYAGQITVEITKACIQVGDVPHHSRK >gi|224461045|gb|GG657759.1| GENE 2018 2110304 - 2111077 801 257 aa, chain - ## HITS:1 COG:lin2923 KEGG:ns NR:ns ## COG: lin2923 COG1192 # Protein_GI_number: 16801982 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Listeria innocua # 1 250 1 250 253 167 39.0 3e-41 MAVSIVLTNQKGGVGKTTTSGAIAAGLSERGKKVLSVDLDPQGNLGFSLGMDIEDGHTMY EVLKKEIRVRDAVRSTEEYGDVLTSNILLSEAEMILKGENRQMILKQVLEDVKDDYDYII IDTPPSLNILTVSGYAAADYLIIPMAAEILSLVGLVQLKETIEAVQNSVNPDLHVLGILL TRFSRRTNLAKDVQEMAETVASQIGTELFGSRIRTGVSAAEAPAHGKSVFDYSPRSNPSK DYREFIEEVLNKIENEA >gi|224461045|gb|GG657759.1| GENE 2019 2111111 - 2112436 1428 441 aa, chain - ## HITS:1 COG:VC1851 KEGG:ns NR:ns ## COG: VC1851 COG3434 # Protein_GI_number: 15641853 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing EAL and modified HD-GYP domains # Organism: Vibrio cholerae # 5 401 6 393 404 161 30.0 2e-39 MDRCVVRQAIKETMTGNIIGYELLFQGSDDSFYDEPETSAADMISNFLMNNSNKFVSDKI MFITFTPSLLFRNTPKMFEPDKVIIQIEDNLIIHPLATPFIKKYCELGYQFAINNFQFSQ KYMEMLEYAKYIRINLSQAETTETERGKKSVENIVSMAQGTGKKCIATGVNTKEVYDYAV KLKVDYLEGNYVAKTLASKVDKVKYMQGNFFQLMVAVSEEEPDMEEIEQIVSRDAGLTYA LLKLVNSAYFALRRRTASIRQALVTLGITQLRQWVYMLSFDSKGTDSSSEELLKISFLRA TFASELVGYIKDCPINKTDAYLIGMFSTLEYMVNATEEEILEEIPVSAEVKNALVAQEGT AGKIYSLLLAYERADWKQSKKLSESLGVPTYLLAQTYIDCVDEVNEIWKGLTTEFERPGE ERRFMHFDDSDDREHLEDVLY >gi|224461045|gb|GG657759.1| GENE 2020 2112436 - 2113350 1026 304 aa, chain - ## HITS:1 COG:BH1712_2 KEGG:ns NR:ns ## COG: BH1712_2 COG0784 # Protein_GI_number: 15614275 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Bacillus halodurans # 164 300 1 137 138 129 46.0 7e-30 MANTEILLESGTNEIEIMEFTIYDELYGINVAKVREIMMTDKIKPVPHSHDAVEGIFKPR DIMLTVVDLPYYLTGRTTVPQPKDLFMVTNFNQMHIAFRVHTVVGIQRISWEDIKKPDKT LNGGEEGLATGIAQCGKELITILDFEKIVADIAPETGIQLEEVESFAGRNRSEYSIVLAE DSVLLSRMIETALTKSGYSQIHKFNNGQEAWNYLSQVRNEDVLDDKVSLIITDIEMPQMD GHRLTKLVKEDDRLKKIPLIIFSSLINPEMEIKGRELGADEQLSKPEIGHLVAVMDHLLQ RGRE >gi|224461045|gb|GG657759.1| GENE 2021 2113452 - 2113922 624 156 aa, chain - ## HITS:1 COG:CAC2223 KEGG:ns NR:ns ## COG: CAC2223 COG1871 # Protein_GI_number: 15895491 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein; stimulates methylation of MCP proteins # Organism: Clostridium acetobutylicum # 1 150 10 160 166 102 40.0 4e-22 MKVGIADMKITRQEGTLITYALGSCIGISFYDPGIKLAALLHIMLPESKNPAEPQVYKFA DTGIRETLRRMAVFGGVKSRYVCKIAGGAKMFEVQGNSSLANIGQRNIESVRSILRNEQI RLTRQEVGENYARTMLVDAATGKVTIRTFGRQEIVM >gi|224461045|gb|GG657759.1| GENE 2022 2113927 - 2114553 898 208 aa, chain - ## HITS:1 COG:BH2434 KEGG:ns NR:ns ## COG: BH2434 COG1776 # Protein_GI_number: 15614997 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein CheC, inhibitor of MCP methylation # Organism: Bacillus halodurans # 14 203 12 203 209 115 34.0 6e-26 MEIKHYDDMGEIGMDVMREVGSIGTGNAATAVSGLLNTDVRITLPDVEILGFNEAADFLG QPEEMVAAVLVQMSGDLKGIMLFLLKLDFINAVTETILGCKIEDYSEMDEMAVSAVTEVG NIIISSYVNALAGLSGMEINLSVPAVSINMLGGILSVPMIEFGYETDKIMMITGNFILGH HKLESSLLMLPDIESLNKLLKKLVNIGE >gi|224461045|gb|GG657759.1| GENE 2023 2114573 - 2115283 927 236 aa, chain - ## HITS:1 COG:aq_834 KEGG:ns NR:ns ## COG: aq_834 COG4786 # Protein_GI_number: 15606190 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Aquifex aeolicus # 1 235 1 261 262 110 32.0 3e-24 MNTSFYTASRGARTQQDKLNVISNNFANVNTYGYKAKSSVFQDLMYYNMRAGEGVATHLT SGTGTVLDHTNTNFSQSGLGDGIGGYDYAISGDGFFMLRDPVTNEISYTRNGHFSLSRRA DGFYLVTDSNKLVLDEGQNPIRVQGGTLQGRPGVYSFASTDGMQSAGDNEFVPVAKNGAP VLNREAKLLEGYLELSNVDMAQEMANTVESSRAYSYVLKMVQSSDEIEQTINSLRG >gi|224461045|gb|GG657759.1| GENE 2024 2115299 - 2116051 929 250 aa, chain - ## HITS:1 COG:TP0961 KEGG:ns NR:ns ## COG: TP0961 COG4786 # Protein_GI_number: 15639945 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Treponema pallidum # 1 243 1 263 271 118 31.0 1e-26 MFQGFYNLTSGVLTQTRRMNVISNNMSNVSTPGYKRDQFVCKTFKEEMIYRSGNKDKSSP AQLGTMNRIVAADRNYTDFAAGGYESTESPLDFAIGTSGFFRIQSGNGTVYTRNGSFSLD NNGYLALQGVGRVLGQNGPIYLGTDKIRADRLGNLYSEDGNNFLGRLSVVDFQNYDEELT KTTGDVYTSAGQGTAVNADVVHKALESSNVEPVNEMTQMMAGERALQSSAQVLKMYDQII GKVVTQLGPV >gi|224461045|gb|GG657759.1| GENE 2025 2116032 - 2116856 1086 274 aa, chain - ## HITS:1 COG:TP0709 KEGG:ns NR:ns ## COG: TP0709 COG1191 # Protein_GI_number: 15639696 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Treponema pallidum # 14 262 9 259 262 136 35.0 4e-32 MVQEEKRKKNLADQTNEELLELYRKTGSLEVKQEIALRYLYIVKSIAVQMRNVYAGFSQV EDIVNEGVIMLMKAIDKYEADKNAKFETYVSKRIRGMIIDIARKQDWIPRTVRKSYRDIK EASAVFYSEHGREPEAEELSELLHMDIEKFRDIMGKASLFSVLSLDMVLEETKEQYRSIQ IPSDKKEEQPEAHLMDKEFRHMLADGIRSLKENEQTVISLYYMEELNMKEIAGILHVSEP RISQIHAGAIRKLREYFTEKTKLEREGYHVSGVL >gi|224461045|gb|GG657759.1| GENE 2026 2116866 - 2118935 2136 689 aa, chain - ## HITS:1 COG:BH2438 KEGG:ns NR:ns ## COG: BH2438 COG1298 # Protein_GI_number: 15615001 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Bacillus halodurans # 23 684 22 672 677 558 47.0 1e-158 MKRILNNAVAALVIVIVLLMIIPMPPFLLDVMIIINISLSMIILLISMNIREPLEFSVFP SLLLITTLFRLGINVSSTKNILTNQGSAGQVIKSFGDFVLQGNVIVGFIIFMIIVLVQFI VITKGAERVAEVAARFTLDAMPGKQMAIDADLSSGLITEQEARTRRNKIQREADFYGAMD GATKIVKGDAVMSLIITFINLIGGSAIGILQSGMAFSDVLSVYSIATVGDGLVSQIPALL ISTSTGMIVTRAVSEGSLNEDVSRQFLAQPKAIMMTGGVLLILMLVPGMPKIQLVLLAVL FLLAGYQISKKMQEQTVLEEAAARQTADMDAAAPATEEEYYRDINNIYNLIGVEPIEMEF GYSLIPLVDESSGGKMINRIVIFRRQYAQEMGFVIPSVRLRDSSSLNTNQYIIKIKGEEV ARGEILVDHYLALEPASPSGEIDGIETIEPAYGIPSKWILPENKEMAEIYGYTVIDPLSV MLTHLSETIRQHAYELLSRQEVSLLLDNVKKTSAELVDEVVPGIISHGSLQKILISLLKE GIPIKDMESILETIADASGAGLDITSVTENIRSALKRTITRKFCEGGQMRVVTLDAGLEK LLVSSMAKSDQGVYLAVSPDIMQSMLTQIGEQMKKFQELSQDTVILTSQVIRPYLYRMLE QFYPSVYVLAFNEIADNIQIQAVGNIRKE >gi|224461045|gb|GG657759.1| GENE 2027 2118939 - 2120000 1048 353 aa, chain - ## HITS:1 COG:BS_flhB KEGG:ns NR:ns ## COG: BS_flhB COG1377 # Protein_GI_number: 16078701 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Bacillus subtilis # 3 352 11 359 360 259 39.0 4e-69 MAADSKTEKATPKKRRDERKEGNIFQSSDVVNVVFVFLSFYILKLIFPGIYETSGNFMKR FISLAGSITDLSGQSVGKYGMEFLSAAARTVLPFACICMVTGIVMHGIQTRFLFTSKNFR PKLNRISPLQGIKRIFALKNAIELVKNLLKVIVLVAIIYTLLKQDAVNVIRTMDMSISAS AAYTFDMIISMILRVSMVFAVIAFLDYLFQWWDYERKIKMSKQEVKEEFKQTEGNPEIKG RIRDIQKQRARSRMMQAVPNADVIIRNPTHFAVALSYDTEKNNAPVVVAKGVDELALRIV RTGEENHVAVIEDRPLARSLYAETELNREIPSEYYGAVAEILVYVYKLNKKMR >gi|224461045|gb|GG657759.1| GENE 2028 2120017 - 2120790 1105 257 aa, chain - ## HITS:1 COG:BS_fliR KEGG:ns NR:ns ## COG: BS_fliR COG1684 # Protein_GI_number: 16078700 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Bacillus subtilis # 9 257 8 258 259 99 29.0 5e-21 MLLAGTPEFLVFTLVLMRMSGFVFLNPILGRKNIPAVFKTGLALVLALVVYPQAEPAGEE VTSAVVYAVLLLKEFALGYLLGFVMQLFDMVVSFAGSVIDFQMGLSMATVYDAQNGTQIA LTGNILQIYYLLLFFAVDGHLALLKILMTSQDIVPYAALKLGTGSAQAVLQIFTECVVLA VKLAFPIIAFEFLVEVATGLLMRIIPQINLFVMSIQLRVIIGLAMMVFLISPAGDYLKGI ISQMMQGLQDVLRTVNI >gi|224461045|gb|GG657759.1| GENE 2029 2120803 - 2121066 344 87 aa, chain - ## HITS:1 COG:no KEGG:Closa_3451 NR:ns ## KEGG: Closa_3451 # Name: not_defined # Def: export protein FliQ family 3 # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 1 81 1 81 86 70 65.0 3e-11 MTTGEIGDLMYQMFILAVKLGGPILLISMIVGIVISILQAATQIHEQTLTFVPKLIVIGI ILVITGNSMLKMLQEFTQQIFRFIAEG >gi|224461045|gb|GG657759.1| GENE 2030 2121082 - 2121744 699 220 aa, chain - ## HITS:1 COG:STM1979 KEGG:ns NR:ns ## COG: STM1979 COG1338 # Protein_GI_number: 16765317 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Salmonella typhimurium LT2 # 11 218 34 243 245 193 50.0 2e-49 MNTGALVNINGGQVPTLEILVMMTVVMLLPSIVVMMTSFVRIIIILSFTRNAIGVQQTPP NMVLVGIALFLTLFIMDPVIKDINTEAYEPYKNGEIAQEEALDRATVPMKKFMLKQTEVS TLNLYVDMAGIEEKTAPEDLPMRVVIPSFMTSELKRGFMAGLLLFIPFLLIDIIVSSTLM SMGMIMLPPATIALPFKLLLFVTLNGWELLFSSIVQSFNY >gi|224461045|gb|GG657759.1| GENE 2031 2121741 - 2122091 403 116 aa, chain - ## HITS:1 COG:no KEGG:Closa_3453 NR:ns ## KEGG: Closa_3453 # Name: not_defined # Def: flagellar biosynthesis protein FliZ # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 2 116 1 117 118 75 34.0 7e-13 MLNGFFTAAGTLLIVVLILYLAYVCSKYVAKTGKMKGSSRYIRMVDQIGAGQDRTIAVVQ TGRGYLLLGITAAQITVLKELGEEELEEIESPAGQSTEFTDFRSVMEKIGKRKRSE >gi|224461045|gb|GG657759.1| GENE 2032 2122105 - 2123487 1679 460 aa, chain - ## HITS:1 COG:BS_fliY_1 KEGG:ns NR:ns ## COG: BS_fliY_1 COG1776 # Protein_GI_number: 16078695 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein CheC, inhibitor of MCP methylation # Organism: Bacillus subtilis # 2 229 29 250 264 127 36.0 5e-29 MDVKKLSTMEIDAIGEILNISLGASATAISTMLDARVDITTPIVQVRNKEEFEFGNLEPA VGVEIIYIEGLTGSNIMLLKRNDVRVIVEMLMGMEIPEEEFELDEMNISAICEVKNQMMG ASATALSELLGKAVNISTPVSFDIESPEQFKEKYFTEESPMVVIGFTLRIADKMESEFMN LMPIGLARELVAGFFSDGTPELPKEETVVLPEEETVTAAAVSEPVPAEPAAAMPEAGPEA AQAPVAAGTVPEPEAAAPSAGAAVSEPAPQAGLMQDTEAPADIPVMPQATPPAANPAVQA APPVSAVQPAGTVAAADPQFMNSMTQMMDLMRQQLEMQQVQLQQMKQTQAAGPKKIKVNP VSQPNLEQSAEETELQESNLELIMGVPLEVSVEIGRTKKLVKDVLELNKGSLVVLDKLAG EQVDLFVNGQCIAQGDVVVVDDNFGIRITEILADEIPLAQ >gi|224461045|gb|GG657759.1| GENE 2033 2123522 - 2123965 479 147 aa, chain - ## HITS:1 COG:BS_flgC KEGG:ns NR:ns ## COG: BS_flgC COG1558 # Protein_GI_number: 16078682 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Bacillus subtilis # 1 147 1 150 150 134 50.0 7e-32 MSFLSSLNISASGMTAQRLRLDIASENIANIETTRTEDGTPYRRKMVVLESRKENFRSVL GRAMSGQNSANRGGVAAAAIIDDDTELKAVLDPEHPDADENGYVRMPNVDMIKETTDAMA ATRSYEANITAFNAVKLMAQKAMEIGK >gi|224461045|gb|GG657759.1| GENE 2034 2123990 - 2124349 507 119 aa, chain - ## HITS:1 COG:CAC2218 KEGG:ns NR:ns ## COG: CAC2218 COG0784 # Protein_GI_number: 15895486 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Clostridium acetobutylicum # 1 118 1 118 119 139 62.0 1e-33 MAKIMVVDDAAFMRMMVKDTLSKGGYTDICEASDGAEALQMYKDEKPALVLMDITMPNMD GLEALKAIKAFDPGATVVMCSAMGQETMVIEAIKSGAKDFIVKPFKANRILDTVSKIID >gi|224461045|gb|GG657759.1| GENE 2035 2124406 - 2125416 1105 336 aa, chain - ## HITS:1 COG:CAC2216 KEGG:ns NR:ns ## COG: CAC2216 COG1868 # Protein_GI_number: 15895484 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Clostridium acetobutylicum # 1 331 1 326 331 135 30.0 2e-31 MAEVLSQSQIDALLNSMMNSDAAEEPKEEKPEKNWKKYDFKSPKKFTKDKLKLLKGIYDN YGRLASSRLNGVLRTACEMEVLSVEEQRYFEFSNILSENDVMMMLNLKLPDESKNPPMMI HISQKLMVNMIDRMLGGTGDDDDVDSSYTYSEIESALYKKVMKYLLDITRDAWGNYIKIN LGDQRLEENPGLFQEISLDEPVAIVLLNVKMQNIDGRITICIPGNLLMNIFNIIDKRKHV DGLYDEGIANSRELIMTRLNRSTMEIKAELAEAQLSMKEVCGLKVGDVIDLNKSRESDVV LYVEEQPWFRGKLGAHNKNAAVKIKQCIQEEAPADK >gi|224461045|gb|GG657759.1| GENE 2036 2125455 - 2126222 831 255 aa, chain - ## HITS:1 COG:PA1461 KEGG:ns NR:ns ## COG: PA1461 COG1360 # Protein_GI_number: 15596658 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Pseudomonas aeruginosa # 1 242 1 250 296 87 25.0 2e-17 MKRRQKSPEEGSDWMGTYGDMVTLLLCFFVLLYSISSVDQVKWENLVKSMNPEAAEPSQI VTDTMEKEGTENVPGANTTEIDQKFDEMYDNLLKMQDASGEVADIQIAKGDGYQFITFKD NVFFDGDSYVLRDEGKSVLDTFSSVIAPASDAIKEIQVLGHTSQAEPNIPNEVMTDRVLS ATRSAVVVAYVQQKNIIEAKKLVSAGYGQFRPIDTFDTFEGRARNRRVEILITKTGSVEQ TLDEYYSQVYKNEGN >gi|224461045|gb|GG657759.1| GENE 2037 2126240 - 2127064 1104 274 aa, chain - ## HITS:1 COG:BS_ytxD KEGG:ns NR:ns ## COG: BS_ytxD COG1291 # Protein_GI_number: 16080025 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Bacillus subtilis # 28 274 34 266 272 187 39.0 1e-47 MDITTLLGVVGGFAFIVNAIMQGGKIGSFIDVASIMIVVGGTLCAVIASFPFNMLKNVGK HFTKLLSNKKFQVEPVIDMLVEFAQLARKNGLLALEEKANQLDDPFFKQGIMLVVDAMEA DKVREMLETEVDSMSQRHEEEIAIYEKAAGYAPAFGMIGTLVGLINMLKSMDLSQGSSST LGESMATALVTTFYGCIMANLMFMPIAKKLRIRNEEEILYKQIIIEGVIGIQSGENPKNL KEKLVSLLHQQKQAKIMDGEEGKGKKPKKEKKKK >gi|224461045|gb|GG657759.1| GENE 2038 2127067 - 2127270 179 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569970|ref|ZP_03778995.1| ## NR: gi|225569970|ref|ZP_03778995.1| hypothetical protein CLOHYLEM_06065 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06065 [Clostridium hylemonae DSM 15053] # 1 67 1 67 67 107 100.0 3e-22 MIELTKLNGEPVLINSRQIEYIELIPESKIIMMNGKYHIVREDKDDIIKKVIVFNNQCIN YPRNEEV >gi|224461045|gb|GG657759.1| GENE 2039 2127326 - 2128210 1002 294 aa, chain - ## HITS:1 COG:BH2449 KEGG:ns NR:ns ## COG: BH2449 COG4786 # Protein_GI_number: 15615012 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Bacillus halodurans # 1 294 1 263 263 139 36.0 8e-33 MVKSMYAAIAGLRSHQSKMDVISNNIANVNTWGYKSRSANFQDAMYQNVINSTAGNVNAG GTGGQNSSQLGYGVNVGSITTNFTTGSWGFTGDPLNCMINGNGFFIVGPMIADPTDGIAS NNFATSGLSLSRVGIFSVDNNGYLIDDGRNYVYGFTQNADGTWDTDVLRPLQIPNDATGE QYKIQTYKIGTDGTITGITFDKEQITIGKLALAAVENPNGLEQSAGYLYSAGPNAGQITA VEGDYFLSNYLEMSNVELASDMASMITTQRGYQANSKIITVTDEMLEQLVNMKR >gi|224461045|gb|GG657759.1| GENE 2040 2128297 - 2128665 387 122 aa, chain - ## HITS:1 COG:no KEGG:Closa_3462 NR:ns ## KEGG: Closa_3462 # Name: not_defined # Def: flagellar operon protein # Organism: C.saccharolyticum # Pathway: not_defined # 41 122 43 124 124 100 65.0 2e-20 MEIRNLSTVRELRLQHEGYRQKEEKADFGALYDKEIQRTGLQFSKHAAMRMSERGVELTS KLAVDLKEAVDKARDKGAKDVVVIGSSSAFIVNVTNNTVVTTMNAQEMKNNIFTNIDSAV LL >gi|224461045|gb|GG657759.1| GENE 2041 2128652 - 2129167 525 171 aa, chain - ## HITS:1 COG:BB0284 KEGG:ns NR:ns ## COG: BB0284 COG1843 # Protein_GI_number: 15594629 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Borrelia burgdorferi # 40 151 39 144 147 57 33.0 9e-09 MNTLGNILANYNNAAAARTSSAGNSAGTSSSKGSNELTINDFYKLLSAQLRYQDADNPMD TSEMMAQMVQTQMIQAITEMSAINLEMYAINTISYASSMVGKTVTMAEVDEDGKFTGETT TGTVSGILMGNNPSLYIDGKEYSLSQIMTVGEVPDSAIEDGGDKGEGDGNT >gi|224461045|gb|GG657759.1| GENE 2042 2129182 - 2130279 1148 365 aa, chain - ## HITS:1 COG:no KEGG:Closa_3464 NR:ns ## KEGG: Closa_3464 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 223 364 275 412 424 74 38.0 8e-12 MNTIVAEVPGTGMAVNSGRKDKSLHGEKQLRFDEVLKGQKEQHAAKKEEKQETDVKEETA SPAGAEIPAVPNAENAAQIMSEMYVTVPVLEENAYVTKEKPASLPELQDITDITADRPDI KAPEKHADALAGREGTTKEFSVREMPGEQTETIKDTFSRMPQEREIPAEPQQIKLREDEA GAGGTGGMREERDDAKISAAAVKIPEAGDRTAEHIPVVREVPAAHKTVHAEDIRAEYMDM LKTDIVKQIVSGKQQFEVQLHPDNLGTLVIKAAYEAGKTVISIVCSEARTMQAMSQQAKE LAGIMEARTGNETEVIVERPAEDYLQQEQNDQGQGREPDRQQREKHKGEFHENFDFLQQL RLGLA >gi|224461045|gb|GG657759.1| GENE 2043 2130334 - 2130831 545 165 aa, chain - ## HITS:1 COG:no KEGG:Closa_3465 NR:ns ## KEGG: Closa_3465 # Name: not_defined # Def: flagellar export protein FliJ # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 16 159 1 144 149 85 39.0 9e-16 MINKSFPESGCGGIQMKKFAFSLDKVLTYKEQIEHNLRAEYAQIVQKVAREEERLQMLEE EHAVCRMRYEEEKNRGSTIRQMKIYEGYLESVLWKIQKTEKIIDRLKVEEEKKRVEVIAA KTEASSIDRLKDKRKKEYNAAERKAEEIFVEEFVANTSSAAARMG >gi|224461045|gb|GG657759.1| GENE 2044 2130821 - 2132128 1531 435 aa, chain - ## HITS:1 COG:TM0218 KEGG:ns NR:ns ## COG: TM0218 COG1157 # Protein_GI_number: 15642991 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Thermotoga maritima # 1 432 4 430 438 449 54.0 1e-126 MLKDLPGMIMKAETINHIGKIENITGMSMEASGGSANIGDIVLIYNEEQKKQIPAEVVGF RGEKIQLMAYENMPGIGTDSFVRSTKKRLKIPVGQFLRGRIIDALGNPIDDKGPFESERY YYVESPKINPLSRPPISEELHFGVKAIDGLNTIGKGQRIGIFAGSGVGKSTLLGMIARNV ETDINVIALVGERGREVREFVEKDLGPEGMKRSVLVVATSDQPAMLRMKCPIVATTIAEY FKDQGKDVLLMMDSLTRFAMAQREIGLATGEPPVARGYTPSIYAEFPKLLERSGKFENGS ITGVYTVLVEGDDTNEPVADTVRGILDGHIVLSRKLANANHFPAIDVSASISRLMTDIVT EEHRELASKLRDILSVYEQNEDLISIGAYKSGTNEKLDHAISKIEQVNRFLMQEIDRKYE KDEMLDVMRKILVDQ >gi|224461045|gb|GG657759.1| GENE 2045 2132149 - 2132898 957 249 aa, chain - ## HITS:1 COG:no KEGG:Closa_3467 NR:ns ## KEGG: Closa_3467 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 21 249 26 258 258 154 43.0 3e-36 MYRVLKNERENSSKALKYEIYKELSLEEEPEAGAEDHMQEEPESSGADSILEEAARQAER ILDAARKGADKIKEDAWQEAFAQGEEEGYKEGIRKALEENRLRFEEEMAQLQERIARYVK EVGEEKDKLLEKYIDDLKNIALSIGEKIVQTSLRTSEDVVERMILAATEKLKKAAWAKVY IGSGRETLDIQGDAEFLRSLSKMADSVKVIMMDEEEKGTCIVELPDEIIDISVGTQLENI KEILNNARL >gi|224461045|gb|GG657759.1| GENE 2046 2132891 - 2133916 1204 341 aa, chain - ## HITS:1 COG:BH2457 KEGG:ns NR:ns ## COG: BH2457 COG1536 # Protein_GI_number: 15615020 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Bacillus halodurans # 12 341 6 335 335 284 46.0 2e-76 MDEKQTNNAANLSPGRKAAAVIAALGADKASKVYKYLTEEEVEKLTLEVAKLGHLEAEQT EAVLDDFYKSCLTQKVVTDGGMEYARSVLEKTYGESVANELLKKMTKYLKNRSFDFISKM DTKNLFSVLQHERPQTIALILSYVDSGQAAALIAELPEGKRLKVVESIARMESASPDAIK IVETQLLKKFDNILTTDFTTIGGIDYIADVMNHMDRSNEKYIFDEMGKDDPDLAEAIRKK MFVFEDILTMNDRSIQRFIRDCDMKDVVYALKNANQELLQLFFSNMSTRMAETVQSDLEV TVNVRLRDVEEAQQRIVNIIRKLDEEGELVIGKGGKDDIIV >gi|224461045|gb|GG657759.1| GENE 2047 2133894 - 2135474 1651 526 aa, chain - ## HITS:1 COG:BS_fliF KEGG:ns NR:ns ## COG: BS_fliF COG1766 # Protein_GI_number: 16078684 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Bacillus subtilis # 3 514 14 533 536 123 26.0 8e-28 MKDFLGKYSKKTKIIAGTAAVAVIAAAVIIALVLNHKDYTTLFTGVTEEEATKIIGKLQE SGVDFQYKENGDILVDEKVADKTRADLVYEGYPKSGFTYDVFTENSGGMTTDSEKETYKL YDLQDRIGATIRFFDGVKDAKVNIALKEEQKYVLEEDGEKAGTPSASVVVTMESGESPSE KQAAAIQRLVAKSVPEMEMENVAVFDGNGIEVSVNKDGSSASGSNATEEIAQLIEMQISK KVINVLGSFYGAENIRVSARGKVNMEKVIRESTTYTTPEKIDEKDKTGIVSSESTTKDTV NGGGAGTGVAGSETNADTPEYNAGTDNNASGSASESATRDYLVNQVKEQGELDTGVLEDL TVSVAINGKNAGNISMNELRDLVGNATGIAAADRLEKITIVNAPFYEENADKDTKEVSNI LKNIKDNLPVIAVAAVIAVVIIILAVILIRRRRKRRMEEEEELEDLLIPDVTEEIRKPEI LNLKNEKSRELRENVRDFADENPEISAQMIRNWLNGGEQDGRKADE >gi|224461045|gb|GG657759.1| GENE 2048 2135536 - 2135844 364 102 aa, chain - ## HITS:1 COG:no KEGG:Closa_3470 NR:ns ## KEGG: Closa_3470 # Name: not_defined # Def: flagellar hook-basal body complex protein FliE # Organism: C.saccharolyticum # Pathway: Flagellar assembly [PATH:csh02040] # 2 102 1 103 103 89 50.0 4e-17 MIENGFITPIQRMDSIGTLKRNENVEQSGNSLFSDIFNNAVKDVKDTQANLEQQQYLLAT GQIDDAHTVPIAASEAQMAVDMLVQLRNKALESYNELMRISL >gi|224461045|gb|GG657759.1| GENE 2049 2135855 - 2136232 482 125 aa, chain - ## HITS:1 COG:TM1364 KEGG:ns NR:ns ## COG: TM1364 COG1815 # Protein_GI_number: 15644116 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Thermotoga maritima # 1 124 1 125 127 66 34.0 1e-11 MYGNTIGMMEKSLDFLWTKQGVTSNNIANVDTPGYKSKYVTFEETFQRRLAAATKAGDGR QVRQAIAGASAVVNETPGETARLDGNNVNADAEMVELTRTALQYQYGINSVNSDITRLRT VIKGQ >gi|224461045|gb|GG657759.1| GENE 2050 2136302 - 2138431 2447 709 aa, chain - ## HITS:1 COG:slr1588_2 KEGG:ns NR:ns ## COG: slr1588_2 COG2200 # Protein_GI_number: 16332199 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 442 702 7 266 283 144 28.0 4e-34 MTISDNEILSLIVNEGNDVTYLSDIENYKLYFVNRKGLEILGNPEMEEWYGRPCYEVLQN RNSPCPFCTNHLLSEESFYEWNFYNEYMKREFVKRGIIVNFNGRKTRMEFAMDVTKICDM ERKLKQELDVQKVLVDCALALNRESKEGDESIYAFLTIIRDYYDADRAYIFEITEEKQSL KNTFEICRKGIKPQIDNLQELPLSAVDCWMQAFEKGQIYNISSLSKEKNHDSEEYRILAA QNVDSLLAMPLVLEGEVIGFLGVDNPTVNADVEVLLRLTPEFIVNDIRKRQIWQEAKNSG YIDDLTGLGNRKKSRQMVEWLEQQYQEEFGIVTVDIDSLRNINNAYGYEWGDHMLRYVAQ TLIKCFGDYVYRVGDDEFVAFCLDIRKSEFEEEVRKLQKIAKWDEQLQIAIGSSWFEGES DIDYQITVANEKMHINKVKNYKRGTVGQKSIQKYRGVLAENLQREIETGRFVVYLQPQIN LKNNRIGGAEALIRRLDEHGNIIFPNSFVSRYEGDEIIRYIDFYVLERVCRILKQWKEKG RQDVGIAVNFSRVTMMEDEVVEKMRAVCRKFGVDPGQITIEVTESIGMLERDTLKELLDD IQKSGFRISLDDFGSRYSDLALLSLADFNEIKLDKSLIDRLEIGGKPRVIAEYVLRMCME LKLTHSVAEGIETVSQREILKNFGCELGQGYLFDKPMPVDEFENKYLEL >gi|224461045|gb|GG657759.1| GENE 2051 2138877 - 2140673 1891 598 aa, chain + ## HITS:1 COG:CAC0120 KEGG:ns NR:ns ## COG: CAC0120 COG0840 # Protein_GI_number: 15893416 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 12 571 9 517 555 214 31.0 3e-55 MEKSFQKNTKTIRRKLVSSFAIVTVIASLAGILGIIVTNVMNSQYTGAIKNYGFAQGDAG QAMASLAESQELLFATIALDDPQHVSEAEELMNKALADVSTHMDDVRPTLKTEGGKEAFK KFETDYAAYKESLLGLAGEAMAADKENEDLVAEKITDENDPLYQAAMTDMQNLMESKVTG GNEVIDSLTNASIIAMVAAVVILLAAVVVIIVIAARLRQQIAMPIQRCADRLKLLSQGDI TTPVPDVSGTVEVNEMVECSKIIVSALNQIIKDEEQLLGGMSNGDFTVSSNCKDLYIGDF APLLEAIRGICFRLNDTMEQITEASVQVDAGADQVSSGAQALSQGATEQASSVQELAATI NDISTQISANAENAQNANELSNHVGSDINESNQHMSEMTDAMAAIGEASNQIGKIIKTIE DIAFQTNILALNAAVEAARAGSAGKGFAVVADEVRNLAGKSQDAAQNTTALIENAISAVE NGTQIANTTAEAMGKVVTNAQEVVNLINSISEASKTQADSVAQVTQGIDQISSVVQTNSA TAEESAAASEELSGQARLLKDLMSSFKIRGKDNAASTTSYTSESTYSSYTQPVSSDKY >gi|224461045|gb|GG657759.1| GENE 2052 2141122 - 2141859 795 245 aa, chain - ## HITS:1 COG:BS_yjbJ KEGG:ns NR:ns ## COG: BS_yjbJ COG0741 # Protein_GI_number: 16078222 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Bacillus subtilis # 63 179 59 175 181 135 59.0 1e-31 MAYYNNYNFDPVSFGSGLPVNLYYGQHGSTERTQRAGAGFSQIFAAKSRKNSTATLFDSL PSSMNAIFEEAASRFGVDANLLKAIGKAESAFNASAVSQAGAIGVMQLMPATAAALGVSN PYDARENIMGGASYIADLLRKYGGDVKLALAAYNAGSGNVDKYGGIPPFKETQSYVKKVM EYAGEDITVNGTVSQAASQQYESGETVPLQAVQADSGYLSNLVDLLRIQMEMKLTSILSD VDGEF >gi|224461045|gb|GG657759.1| GENE 2053 2141986 - 2142594 308 202 aa, chain + ## HITS:1 COG:no KEGG:Closa_3420 NR:ns ## KEGG: Closa_3420 # Name: not_defined # Def: type IV pilus assembly PilZ # Organism: C.saccharolyticum # Pathway: not_defined # 3 201 2 213 215 112 32.0 1e-23 MFLIDCHKASIYTIDNEYLCDAHVSHIADRSALLTFEEPYGDILRSEVLVTFYDNAKGLV SCSCRLSDYKEYAVSPGVKHSSALCSFGEVVTALQRRNDLKVRVDLPARLSYTDGEGKTI RSDASIRDISAGGVFVICSCTLCTGQQFSLSFRAGQKELLLTAEVIRIDDAGYGCRFPDM TSSQEASVRSFVFQQDSRNKRF >gi|224461045|gb|GG657759.1| GENE 2054 2142597 - 2142950 500 117 aa, chain - ## HITS:1 COG:TM1672 KEGG:ns NR:ns ## COG: TM1672 COG2257 # Protein_GI_number: 15644420 # Func_class: S Function unknown # Function: Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB # Organism: Thermotoga maritima # 10 87 7 84 86 67 46.0 8e-12 MSEFNELLNKKAVALTYDEDKQASPVIVASGMGYLAEKIVETAEKSGVPVYEDNSLATLL TQLDLGSEIPEELYQAIVDIYIYFLNYKPKSEEPQEQETQAEEPEVQEADPPGEEPS >gi|224461045|gb|GG657759.1| GENE 2055 2142937 - 2144376 1577 479 aa, chain - ## HITS:1 COG:no KEGG:Closa_3422 NR:ns ## KEGG: Closa_3422 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 479 1 473 473 348 37.0 3e-94 MSNILKVTTPVAGYENTNSVRTNPVRNTDPAIQGQVNPEKVMKPDARSDSASQDQNVGLK FQYESNYDNFIQQMREMPAMAEEFSKLFFERFSTLAESGLQDGYAQQIAEFLAMVDVEPK ELLAFVKGQGNASIRFNGAFFSLLRQVMEQTNSVELKSLVLDFVRRYTDMAESPHIMHNI GHLLETLKGKMFQDAGEQLESMSGELNYKAGAGSSGMEENASILKEKILPFLNRYISGTH DRGTLRDMTAQLAAYTARCENSSGVRLMEAFGELMKFQGMQKYFQGFDPAMLMQVLGNTE FEKSVRQQKWMDKLASLIDEGVSGAAGSENKAVFRNLMQAVLLNESVYMPVLHMMIPLQM NGRLMFAEMWIDPDAEGDRREEDGSRKRTVQGLVKFDVQDVGFFDLYFIYQDGNIRLQMN CPEALDESLDAIRRDITQILAENEIKTEELFVESGQRSIPVSEAFPKIFERKNSINVRI >gi|224461045|gb|GG657759.1| GENE 2056 2144509 - 2146593 1801 694 aa, chain + ## HITS:1 COG:CAC0118 KEGG:ns NR:ns ## COG: CAC0118 COG0643 # Protein_GI_number: 15893414 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Clostridium acetobutylicum # 2 690 4 645 649 471 38.0 1e-132 MDNMTDSLLETYLFETNSLLEQLDELLINAEKAGEFTSDDVNEIFRSMHTIKGSSAMLEF QPLMEVAHHIEDLFFFIRENGTGSLTDDQKSELFNLMFKSTDRLRADVEKVENNEPLSMN IDSFVNEINSFLNELRSKDEKDAPNAQSDTGQAGDPGSETSSGKAPKDIPDMNAPYIVHV FFEEDCGMENLRSFMLITALKDTDLEFSFTPEDVETNSDTSDVIAEQGFYLAFLSQEEAE SAIKIISTTSNIRSYELIERPQDVQKEEAPAAKQSSPSEENKAAAAPAASKQPSPAGHAK QSLISVNLSKLDQLMAIVGEIVITESMVTASPELQNVKLDSFLKSARQLRKLTDDLQDIA MSLRMVSVSGVFQKMNRIVRDMKKTLNKDVRLTIVGEDTEVDKTIVDSIGDPIMHIVRNA MDHGIEEDVQTRISAGKPPQGEIKLSARHTGSEVIITVEDDGQGMDTDAILAKAARNGIL TKPEEEYSKKEILSLLMLPGFSTNQEVTEYSGRGVGLDVVRKNVEAIGGTVSITSEKGQG SCTTLKIPLTLAIVNGMEISIGKNVFTIPIAHIRQSFKAEQKDIILDASGHEMIKCMDEF FPIVRIHDMFNMEEGYTNIEDGILIWVEASDKSYCMFVDQLLGEQQVVVKPLPSYLNNFN IKHSGISGCTILGDGNISIILDVASVYTAAQEMF >gi|224461045|gb|GG657759.1| GENE 2057 2146618 - 2147085 607 155 aa, chain + ## HITS:1 COG:CAC0119 KEGG:ns NR:ns ## COG: CAC0119 COG0835 # Protein_GI_number: 15893415 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Clostridium acetobutylicum # 7 153 1 150 168 99 40.0 3e-21 MPDSMMLDETAEDIVVSETTERFLTFMSDGLVFGVSTENVIEIITNYMIRPLPMVPDYIR GIINLRGQVLPVMDIRLRMNKPFREYTSTTCIIILEINSTLIGIAVDTVLQVQDIDTAEA SPIPVENRQELTNAMISLDDGTVVLLLDCDAILRI >gi|224461045|gb|GG657759.1| GENE 2058 2147110 - 2147919 562 269 aa, chain + ## HITS:1 COG:CAC0121 KEGG:ns NR:ns ## COG: CAC0121 COG1352 # Protein_GI_number: 15893417 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Clostridium acetobutylicum # 1 269 1 270 270 235 45.0 6e-62 MLSLSERDFQRLVNFVKTNYGINLEHKQQLIAGRLSNVITSMGYNTFSEYIDHILSRKSP EDIEIMLNKLTTNYTYFMREEAHFDYFRTTVLPWLEQTKKNRVLSIWSAGCSSGQEPYTL SMILKDYFGSKTGMWDTRVLATDISQNVLDTAAAAEYEEESLRNLPAGWKGKYFRKSSKP GFYTVADCIKSNVIFRRFNLMEPIRFKLQFDVIFCRNVMIYFDQPTKEALVKRFYDSTVP GGYLFIGHSESLPKSNIDYKYVIPAAYRK >gi|224461045|gb|GG657759.1| GENE 2059 2147960 - 2149048 652 362 aa, chain + ## HITS:1 COG:ECs2593 KEGG:ns NR:ns ## COG: ECs2593 COG2201 # Protein_GI_number: 15831847 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Escherichia coli O157:H7 # 5 354 2 330 349 259 42.0 4e-69 MTENNKIRVLIIDDSLVFDRFLSEALPKASSNIDVAGYFMSPYDALTKIPVLKPDVITLD VEMPGINGIDFLKKLLPRYPLPVILVSSLNVNVFDALSNGAVDFVKKPDMSRNYTAQLFV QNLCAKILIASRAKVRLPEPPRPSLEPASPPPADSSAASKESVQAHFSLKANNTLIAIGA STGGTEATLEILKRLPADIPGIVITQHMPEGFTKMYADRLNRLCKMEVREAQNGDIIRPG LALISPGGDLQTKVVRIGSKYTVKCYPAEKVNGHRPSVDVLFHSAAEAAGGSAVGIILTG MGQDGAEGLLHMRRSGAYTIGQDKDSCVVYGMPMAAHRMGGVVTQAPCCNIADIAVKYLK NL >gi|224461045|gb|GG657759.1| GENE 2060 2149242 - 2150969 1024 575 aa, chain - ## HITS:1 COG:MA4292 KEGG:ns NR:ns ## COG: MA4292 COG3291 # Protein_GI_number: 20093081 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 217 352 701 833 1995 79 36.0 2e-14 MKVEMRTKKRLGFVLCAALLFCGNVPAVAFAANDGCTHVHDGSCGYVPAVEGAPCGHVHD ESCDGLPVRINVPTDYEEDGGGASNSDTGTPAVQAETAVGVTLPAATDRDASADTFEAGG LEYKVLTSGADLRTVSLTGWGAGGAQATLVIPATVQDGGGNTYKVTEIAERAFAGGTAAT TLDITGAVNLVQIHNNVFKSWKNLTANGLDVSGLVNLTTIGAYAFSNCGFTGGLDVSGLT NLTTVGEDAFGDCGFSSARLPAQMTVIPTGLFSGCRNLAAAELPSGLTKIGDHAFQNCGF TGTLDLSGYARLTTISGSAFLENAALTEVRLPAGLTSLGDRAFQECSSLTSLRFYGADAP AIGSYILSAMAANATTGTVYYPFGGAGYSADAFDSGKGMAQFGRWTFTAFNATAPILKAG TAVRTSDTAANVTFTSSRAGRYYYAVVDSGAARPAIDTTGRGTACGTGLQTIRLTTLSAG AQDIYIVVKDADGNVSDRGFKIPIPAFTIPGKGTAETRTADGAPHTRNITINSDTVPQTG DPADILPWLVIIVAVLLGCTSLAAYRKCRGTKRRE >gi|224461045|gb|GG657759.1| GENE 2061 2150969 - 2151181 87 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569999|ref|ZP_03779024.1| ## NR: gi|225569999|ref|ZP_03779024.1| hypothetical protein CLOHYLEM_06094 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06094 [Clostridium hylemonae DSM 15053] # 1 70 1 70 70 108 100.0 1e-22 MPVTQAQQFPLSALLYKASGEAAEKSGTIAPGSLSIPCEAAGARTWTVCIRATAPRSYAA TKKGDLKEDK >gi|224461045|gb|GG657759.1| GENE 2062 2151536 - 2153044 953 502 aa, chain - ## HITS:1 COG:BH1477 KEGG:ns NR:ns ## COG: BH1477 COG1344 # Protein_GI_number: 15614040 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Bacillus halodurans # 1 502 1 464 464 238 40.0 2e-62 MRIQHNIAALNSYRNLTNNNSAVSKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLE TAQKNAQDGISLVQTAEGALTEVHSMLNRMVELADQSANGTYDNETDRANLQKEIQSLKD EIDRISEGTNFNGINLLDGSLGSGTTGVTAASAANTAATAGNFDAQVNFSFSGLEAGKTV TVKTVAKGTASGITADASGNITLALEAEANKTYTQADIDKLINDATLPKSASGLKITIDN DIKIGTTDGAADVVQVNAAVVAAAKNSSATDAANGITVTANTAGSGNDGHTLTFDNTTGN AKGVTVLANGNVTINLAGGNYTASEINSMLAKAGADMTVSFDGTKSDADLKGAGAAGVFT LAGGAGLASGGGLTLQIGDTADSFNQLTVKVGNMSSTSLGIGAIDISTQEGGKAAVDLIK SAINQVSSTRGDLGAIQNRLEHTINNLSVTTENMTAAESRIRDVDMANEMMAYTKNNILV QASQAMLAQANQIPQGVLQLLQ >gi|224461045|gb|GG657759.1| GENE 2063 2153543 - 2154637 229 364 aa, chain + ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 34 356 45 367 368 128 30.0 1e-29 MPTYLNQSSQTWYCKFYYKDSLGRIRQKKKGGFRLQRDAREWERSFINQHEGSLDMSFSD LYSAYFESMKHRLRDSTLLTKDNLIKTKILPYFGNIPINQIDPGAIREWQNIMCGQQMNN GKHYSSTYLKAMNNQLSTVFNYAVRYYNLPSNPCLAAGSMGKKQAGQKTFWKPEEFHIFL EYFSENMEMYLIFSLLYYTGVRIGEMLAFSYDDFNLQKGTVTVRKSYRRIRKTDYITPPK TPKSFRVIALPAFLIEQLQKYFSLKEGSGMDERIFSGISRYHISKFMNEACENTKVKKIR IHDLRHSHASLLIELGVSPVLIAERLGHENVETTLNIYSHLYPHRQKELAESLDRLYCTN HTMK >gi|224461045|gb|GG657759.1| GENE 2064 2154749 - 2156308 925 519 aa, chain + ## HITS:1 COG:TM0758 KEGG:ns NR:ns ## COG: TM0758 COG1344 # Protein_GI_number: 15643521 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Thermotoga maritima # 1 189 1 187 387 152 53.0 1e-36 MRIQHNIAALNSYRNLTNNNSAVSKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLE TAQKNAQDGISLVQTAEGALTEVHSMLNRMVELADQSANGTYDNKTDRANLQKEIQSLKD EIDRISEGTNFNGINLLDGSLGSTSKANVAVDVKYSGLDSKPGVLTLQAATTAGTTIAAG SANALSTADKTTMEVTFSDANGNLQKKTVEFTAANADITHADNEAVLQKAFEDALGDGYT VSVAGGAVTIASKTAGAGDKLEIFSAKLSDSTGAIANDFGAVANTPGADAYYRLNTGAGV LTAYDGTGNAEDHIFEINGQKFAFATADGAAKLASDVNYIETAAANPTEANIDSMISMIN NKTGIGAVKHGTTDIELKPGTTTGANGNGLTLQIGDTAESFNQLTVSIGDMSTSALGLSG VDISTQAGAKAAVDVIRNAINSVSSTRGDLGAIQNRLEHTINNLSVTTENMTAAESRIRD VDMANEMMAYTKNNILVQASQAMLAQANQIPQGVLQLLQ >gi|224461045|gb|GG657759.1| GENE 2065 2156754 - 2158205 1154 483 aa, chain + ## HITS:1 COG:BH1477 KEGG:ns NR:ns ## COG: BH1477 COG1344 # Protein_GI_number: 15614040 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Bacillus halodurans # 1 483 1 464 464 245 40.0 2e-64 MRIQHNIAALNSYRNLTNNNGAVSKNLEKLSSGYRINRAGDDAAGLAISEKMRAQITGLE TAQKNANDGISLVQTAEGALTEVHSMLNRMVELADQSANGTYDNETDRANLQKEIQSLKD EIDRISEGTNFNGINLLDGSLGGATATASATVSGYQIGGLSTDVKGIKITYDAGTTGDAQ TAAVDALDENGILNITVSNDGTTLSNADLEAALKNAGYKDAKVTGTGTKVAADVAKVDTT KIDPTAATIAGTRADGFKINFAKGETGLASVQITGTAADGAHGATNTDGAVVIQLDNTKS YTSTEINKILSDAGAGAMTVEFSGSKLGSDIVAGLGLGAAQNVTDGVGKQGAGLTLQIGD TADSFNQLTVKVGNMSSTSLGIGSIDISTQEGGKNAVDLIKKAINSVSSTRGDLGAIQNR LEHTINNLSVTTENMTAAESRIRDVDMANEMMAYTKNNILVQASQAMLAQANQIPQGVLQ LLQ >gi|224461045|gb|GG657759.1| GENE 2066 2158382 - 2158576 276 64 aa, chain - ## HITS:1 COG:no KEGG:Ldb2064 NR:ns ## KEGG: Ldb2064 # Name: not_defined # Def: hypothetical protein # Organism: L.delbrueckii # Pathway: not_defined # 1 59 1 59 74 67 67.0 2e-10 MARSKIVKVNEKIAEKVVGTFGKIEDTIVGGYTKIEDAFVDRYLTKDGETIKEAKKRLQG KNKQ >gi|224461045|gb|GG657759.1| GENE 2067 2158876 - 2159343 404 155 aa, chain + ## HITS:1 COG:CAP0046 KEGG:ns NR:ns ## COG: CAP0046 COG1309 # Protein_GI_number: 15004750 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 144 24 176 188 72 27.0 4e-13 MLQTKELHEISVSDICKRCELNRSTFYANYSDIYELADKLREALEKEVNLLYEAETTQKF NSNDYLRLFRHIKENQLFYRTYFKLGYDDQFKLKYYDVHQAKQDFDNRHIEYHIEFFRSG FNAIVKKWLAGGCKETPEEMDEIIRSEYQGRVSLQ >gi|224461045|gb|GG657759.1| GENE 2068 2159688 - 2160638 412 316 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570009|ref|ZP_03779034.1| ## NR: gi|225570009|ref|ZP_03779034.1| hypothetical protein CLOHYLEM_06104 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06104 [Clostridium hylemonae DSM 15053] # 1 316 62 377 377 540 100.0 1e-152 MLSSLQEKYPGIGIFITGELDKDSLRNAAASLGEGSYLLLSDSFLQKMQNSQEDYEKGKS ILVQLLNRLSSSEAPGQAQGFYAAGQETLYWTAEASADKSGQVQKEQNTNAFSWNGTSQD SSDISKTIYSKSGKVSLKVISHSYNNLAGARTKGQVQTVMSRARRDIANLRLAASFGDSE ERMKARTAISSMQKLLQRGGRKIRRLNEAELTALRQKRAQKRQEDSRALKLKLERKKMET RRRTADACIRKEGQLEELNQSFRFRRYNRYDPDEKPENVPNIPELSLPQDIPAMQNADVP ALTAADISISSVPVDF >gi|224461045|gb|GG657759.1| GENE 2069 2160653 - 2161060 385 135 aa, chain - ## HITS:1 COG:no KEGG:Closa_0167 NR:ns ## KEGG: Closa_0167 # Name: not_defined # Def: hemerythrin-like metal-binding protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 129 1 130 134 122 50.0 4e-27 MKYEVTKELETGNVLIDSEHRQLFQMVNNLQDACAQGKGRAQIESSVKFLMDYVKKHFND EESLQKQYKYPGYDAHHKFHQGYMTQIDNAGKELLSKDADIASLAEVNRLIGILISHIRT EDKKIASHIHAIDGK >gi|224461045|gb|GG657759.1| GENE 2070 2161086 - 2162429 1603 447 aa, chain - ## HITS:1 COG:BH2971_2 KEGG:ns NR:ns ## COG: BH2971_2 COG2200 # Protein_GI_number: 15615533 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Bacillus halodurans # 197 447 3 250 251 148 33.0 3e-35 MINFFKSGTAERQKPAKETPDSPEGVQRLGSRELLEKEYSDVAEMANEVLVIIQLNRFNH LNTIFGMEMIETIVKILSGLIADYAERSGGKAYSLQMDLIAVITPYGERDTFLAGLQEQV KKMEEVNFRDEDIVYSNHYTFTYIVYFLDFDKSYIPDIKIILDNMLLKLKQIGNGNSTRG EVYNGAGDPNWRLLDSLSREVKRGWENREFIPYYQLIYELKTGTPVGAELLTRWNHPERG ILTPNEFLSVLEKQGLILNLDLYMLEEACKKIKNWIEEELVTVPITVNVSKLNLHREDFL PKVLDIVKRYDIPGVLLILEIEESIIVTELDSELIHTINELRDYGIQISMDKFAATEYSS LNVLRYVPIDMIKVNPSFFPGGDADRREKIFVRNVFRMLRDLGIRAVAERAETMEDIAKF EKYGCECAQGFYYSKPMCDEEFEKIIF >gi|224461045|gb|GG657759.1| GENE 2071 2162422 - 2164068 1480 548 aa, chain - ## HITS:1 COG:TM0735 KEGG:ns NR:ns ## COG: TM0735 COG1315 # Protein_GI_number: 15643498 # Func_class: L Replication, recombination and repair # Function: Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain # Organism: Thermotoga maritima # 103 539 8 450 455 138 29.0 2e-32 MDEVKVTYKELEQYLKKRNYFGMRPDKEFIRSQLEDPYLAGITFEGLLREGWKVYLQKML ERGSQWEEIRREKKKEQDSIRALFYGMSNTQEREDGRSSFVETDDGMELKLILHRPGPGE KPLTENDIWKLLIKKGVTYGVKESYIRRLVERPIYEKRFRIAQGERPEAGEDGKVIYHFN KDFSLAPKIDAEGKADYKSLDYVKTINKGDLLCEIIPPTRGKEGRGLDGSIIPGIEGRSA NVSAGMNTLLSADKKRIYASCDGFPVEEDGVIHVCKYLQLENVDGKTGNIDFIGSVYISG DVQAGFKVTATDDVIVDGLVEGSLEAGRNIILRNGMKGAGRESLAAGKDIRAEFIENAEV LVKGNVYADVVMNSKVECWESMLVFGRRGRLVGGEYWAGNKIEADEIGNEANVYTALRLF PSVGEDRKRKNFTLQVKEASSMINELSKVLEQKEGMDDAGWRIVVVRVAYLIKYLDKHIE QWQERLMKIQEWNRQNRMVRAMEVLHSNIYIELNSAPFRNRHERFGRTKIYLVGGNIDVI TEGKDSND >gi|224461045|gb|GG657759.1| GENE 2072 2164096 - 2168610 4532 1504 aa, chain - ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 1226 1501 396 656 656 98 30.0 9e-20 MGKKNFRKLKILLMAGAIAALVFTAGAGEALAVGIHVDENAAETGNDDQKAQEDGTAKEQ EESGGNIDKSGQEDAPPAGQESIELVQGDTPALRALKDAAEGKTDLRQVMLSERLTASSV RAVPGAFDISEGDITLSENGDYEQKNKLDTVVSTGTKGDEQFTVTGNTGEYGIRVKSGAS ATIQVQGMKINMTPDAPKKSGIYIEAGATVTLVLGTDDTLVSGSGYMPGITLEPGATLNI TGAGVLDVTGGAGADGISGTDNAQGGTLKVDGEARLHVYSDQESACNVKVSSISNKILQG TLETPVSMDAPTNIQAENKNKRTEKYPMTLPAGHRSFAVSTTADGGEYVSYFPGTDGNVQ SSHLLVDAAAPARHSYNLTGAGNTFAALRNLKDQEVAYTVIFHANGGTFHETENEKLIFD GSKKVKYGELITGAPGNADVERNAHTLLGWYRIQDSAEDSDKWNFDRDQVVRDNMTLYAT WKPDSCTVIYRSGNQNVMTKDGYAYKDTIEKADSWKPGSDINKGYTLVYWQTDDGKRWEF GAGGTQLTKATTVLTAVWLQDCTVTFDPNAGGEEITGWPRKTTVPATWLVSRPDEKPLRA GYRFTNWYKDKACTQEWDFDSDTAKGAKMTLYAGWGAETTIVTFHVDTDAGEMVTPTTLA VGFGNTIDEPSASKPKRTDKLTTEYVVEGWYTDDRPAKKWDFSTELIDPDGEFHLYAKWR QKTCYAVLNPGDKDAAPQEEIPKQVPYGSTLETQYGADGLDDVFTKKGHKITGWRTPAGK LWGMDEPLTEDVSLKAQWEAEVYDVKFETPADAPELPDNEKMQQVVFNRTVQAPAYPETD DAWPGHTFLGWNTDVNGNGTDWIFSGEAGATLVEEPVTLYAQWQRDEYTVSFHTYAGDEN PPPDQSGIYYGENISAPAEPAREHYDFLGWFTDEEHTHLWDFDADTVTGDMVLYAGWEGN LLDVTLHVTYEPEHAEHPGEEVAVTPTEDIRYGDFLDRDMLESLEETKHRDGYTLNGWFT SPDHASESEWKFADMRAEPADEQLDLYAYWTWDEYTVTFVTYDGDEENNIPPVQGVHFGE KITRPENDPVREHYEFDDWYADLEAEDKTPWNFGTDTVKGDMNLYAGWIPDVYTLSFETN GGTPLDPVPVTYGTYVDKELLKTKRTGYELTGWFKDPGLTEAFAPESEYVDRDMTIYAAW ELEKFTVRLHYREDKDSQEEEVTTYTKVYQVGDYIAKPDKAIPHKTLSSWFTAPDWQKEH QWVFKRDKVTGDTDLYAYWSDTLYKVHFETYGGTEIEDKELPWGSLLEAPEAPEHDGCVF GGWFKDAEYKTAWDFEEDFVDGNTTVYAKWKPNTYTVTFDAAGGTGGPAAQKLPYGSLIP EPAAPVREGYVLTGWKSSEGGDWNFAQDTVAGDMTLTAQWKAAAAAAKASGEGKQTGGTG SSGGAGGTSGSGDGTLDSAVQALTDAANGLKKILTGDKAPLTYAVTGIFLSAAALIWLLK KRFK >gi|224461045|gb|GG657759.1| GENE 2073 2168647 - 2170065 1468 472 aa, chain - ## HITS:1 COG:TM1428 KEGG:ns NR:ns ## COG: TM1428 COG0840 # Protein_GI_number: 15644179 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Thermotoga maritima # 4 330 239 550 566 97 26.0 5e-20 MGRKDEKALDTLELSRTRSDKIRKIIARITEGRKAFQTIADINLHASLQMSSLNLELGDK SDRIIKYGKKIGSVGANIQADLSSTSNHTAMIMAEHENLSNTLAEVSDNSAHVLESLNEN KAALAGMQETCSVVSVESKTMKQDMAELQRKIDDVKRAVGSINSISNQINLLSLNASVEA ARAGEAGKGFGVVAGEIHKLYEATNVMIKDMEKSLENITIASARSVKSVNTTVDSLEKVE QGVSEVVERNEGSGREINQIVDNIAKVAATSEEISSSINETSQNMEHLGRETDSLLKMTQ SLEDLNHVLLEKVIRPIQTLEEKMETSTEIIGKMNKDIFYRLDNRIFIESMKSAISAHRT WVATLKSIADTKEIVPLQANPRKCGFGHFYYTINPQKSDILKIWGSVEKPHQELHELGDE AVTAIKNGKEYMLDSIYQRAVSISSILIEKFETMVRMSEDYERRGESVFEAD >gi|224461045|gb|GG657759.1| GENE 2074 2170299 - 2171096 906 265 aa, chain - ## HITS:1 COG:BS_yrhO KEGG:ns NR:ns ## COG: BS_yrhO COG1378 # Protein_GI_number: 16079765 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 2 265 3 263 275 116 27.0 4e-26 MDNEIILLNKIGLTDAEAKVYLTLLQNGSLSGYEAGKLAGVTRSKIYNILESLITKGFIL YTEYESNNKYAAVPMSEVAERVEDETKGVLSDLTERLNIFPQKTNLDYIWHIRTNGNVFA KCRDIIRETKEELLLQIWIQDLPCILHDIQKLEEKGLRLGIVIFGAEDDEAIPLRKYCRH GMGEEKKAEMGGRWITLVSDMSEVVFGQIISDTIAEVIWTESRPMISLAAECVRHDMYFY KSADKFTDIMQQEYGDDLKGIRNIF >gi|224461045|gb|GG657759.1| GENE 2075 2171113 - 2171325 282 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570017|ref|ZP_03779042.1| ## NR: gi|225570017|ref|ZP_03779042.1| hypothetical protein CLOHYLEM_06112 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06112 [Clostridium hylemonae DSM 15053] # 1 70 1 70 70 93 100.0 5e-18 MPHISIKMYPGRTEEVKKELAEKTKAFIMEQMNMEEKYISVSVEEYEKENWKEEVADKIR PEDLYVKSNF >gi|224461045|gb|GG657759.1| GENE 2076 2171341 - 2172327 1185 328 aa, chain - ## HITS:1 COG:MTH1495 KEGG:ns NR:ns ## COG: MTH1495 COG2423 # Protein_GI_number: 15679492 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Methanothermobacter thermautotrophicus # 2 326 14 334 339 208 37.0 1e-53 MLLLSREDIKKVFTIKDAIEADKKAFQLVVEGKCDAPLRTNIQAPKHDGCFLFMPAYVEE MDTASLKIINIFPHNIDNGIPSSPAQVLLIDGSTGIVTAVLDGTYVTQLRTGAASGAAFD VLARKDARIGALIGTGGQAATQLEAMMAARDLEEVRVYDMNYERTVDFAARMQEELKDYG TKIVAVRSSDEAVEGADLLITVTPSSKPVFDGTKVKAGATVSCVGAYQHHMQEMDPRILT RASKIYFDSEEAVLSESGDILIPLEEGIITKDDFTGDLGDVIKGKVTGRENDEEIIVFET VGVATQDLVAAKEIYEKAVAAGVGTQWN >gi|224461045|gb|GG657759.1| GENE 2077 2172438 - 2174288 1925 616 aa, chain - ## HITS:1 COG:no KEGG:Closa_1353 NR:ns ## KEGG: Closa_1353 # Name: not_defined # Def: ATP-dependent OLD family endonuclease # Organism: C.saccharolyticum # Pathway: not_defined # 1 616 1 616 618 816 64.0 0 MQITDLRIRNFKSIRDMHIQGIENALILVGKNNTGKTAVLDAIRAVGGSYEISREDFQED YPNIEIMMSLEICEEDLRRLHRSGAVSQYRRYETWLSDFQKKLPSYAGEILTFEYVANRE GKVRWVDGTKKNNPYIQEIFPQIYYMDTQRSLGQFQEELLMLQEDSLLKQMRKGCCIFDE AKLCNNCFACIGLINQKKPEEMNAFEAAKLLDHKLYQLNLDAFSRRVNENFSRNGGLDEI RFSMNRDIERMLSVTAEAYDPSRNVVKPVAHMGKGMRSIYMLSLLETYAQSEGQNPGMII VEEPEIFLHPQLQKVSGEILYRLSRDNQIIFSTHSPNMLTNFNSRQIRQVVLDGDGCSQV CERTDISAILETLGYSANDLMNVNFVFIVEGKQDKSRLPLLIRKYYSETYDEQGRLSRIA IITTNSCTNIKTYANLKYMNQIYLKDNFLMVRDGDGKDRETLKRQLCRYYEERSREDVDK LPRVTEKNVLILKYYSFENYFLNPSIMVKLGVIGTEEEFYETFLEKWKEYLHKIQSGIQL RKIIGKDLETAEDVRDHIEDIKIHMRGHNLYDIYYGRYKEEETELLTKYIELAAREDFQD ILDAIDQFIYFESRKS >gi|224461045|gb|GG657759.1| GENE 2078 2174324 - 2174503 314 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570020|ref|ZP_03779045.1| ## NR: gi|225570020|ref|ZP_03779045.1| hypothetical protein CLOHYLEM_06115 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06115 [Clostridium hylemonae DSM 15053] # 1 59 1 59 59 102 100.0 1e-20 MLVCEYIVERIDGDYAMLRRTDEKEEGAEPKMVARALLPPETAEGTKLLYEWMQYSIVE >gi|224461045|gb|GG657759.1| GENE 2079 2174707 - 2174793 76 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEFISAQYFLICAEWKKFFMIDDIKFYC >gi|224461045|gb|GG657759.1| GENE 2080 2174978 - 2175247 170 89 aa, chain - ## HITS:1 COG:no KEGG:lhv_0422 NR:ns ## KEGG: lhv_0422 # Name: not_defined # Def: hypothetical protein # Organism: L.helveticus # Pathway: not_defined # 1 86 11 93 97 80 43.0 3e-14 MMYPYMTLADETEIVHSQIIDEDGKQKVIVHFERPTEEGFDSARCELPDYKWISKEGYSD QEVAMFEQLLHSNAHLLYKYAANGGIQIA >gi|224461045|gb|GG657759.1| GENE 2081 2175610 - 2176878 1504 422 aa, chain - ## HITS:1 COG:PAB0724 KEGG:ns NR:ns ## COG: PAB0724 COG0477 # Protein_GI_number: 14521293 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pyrococcus abyssi # 4 418 1 409 418 135 27.0 1e-31 MKLMNRNFVLVVIGQIISLFGNSILRFALPLYLLDATGSSAVFGAAMACSFIPMALLSPV GGLLADRINKKNIMVALDFGTALLTILFLLGVNVYSPVILVTIVMIVLSGIQAVYQPSVQ ASMPLLQEKENLVTANAIINQINALSGLLGPVAGGIVYGVWGLTPVVAAGCVCFFLSAVM EIFIKIPNVRQNAQNSIWSTVKQDMGSSLNYIRKEQPVIKKVVVLIAFFNLFLTSLIIVG IPVIVKIYLGLSSQLYGYAQGFGAAGGLIGGVLTGVLAGKLKIQKAWKLLLWASFVLLPM GAVLAAPVPVMAAYIVMTLCYGMIMMIATMFSVQMLAYVQEVTPVHLVGKVISMAMAVSM CAQPAGQAMYGVLFDKLGQMPYVVIGATLIVTAGIVIMARHIFAGITTGQEQTGQIPEID FV >gi|224461045|gb|GG657759.1| GENE 2082 2176961 - 2177599 798 212 aa, chain - ## HITS:1 COG:CAC3606 KEGG:ns NR:ns ## COG: CAC3606 COG1309 # Protein_GI_number: 15896840 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 20 188 21 187 202 86 32.0 4e-17 MARNKYPEVTVQRILDVSMNLFLEKGYENTTIQDIVDELGDLSKGAIYHHFKSKEDIIQA VGERIHAGVDFGSMYDGEENMSGREKIKQIVLYCVKSTDQRRFLKSAPTIMENPKFLAME VHESVEEFAPIIAAYIAEGNRDGSLNVEYPEEAAEVLMLLANIWINPLVFTGNMEKFEHK LHCLEKVLNGMGLTIIDEEVREAVRDMRKVLD >gi|224461045|gb|GG657759.1| GENE 2083 2177733 - 2178242 256 169 aa, chain + ## HITS:1 COG:no KEGG:Hore_02780 NR:ns ## KEGG: Hore_02780 # Name: not_defined # Def: hypothetical protein # Organism: H.orenii # Pathway: not_defined # 16 165 19 170 182 90 35.0 2e-17 MKELYHKADLPYITAVVVLGCLNHFIYEWTGESPISALFCPVNESVWEHLKLLFFPYLFV ITFVYFYEHRTSLSRYFCSRLLAALLGMSAIIVVFYTYTGIVGRSFVVLDILIFVFAVLV SFRAAPLFYRCHFCRDASSLVFAGWIFAVICFFFFTCQPPDLPLFFPPA >gi|224461045|gb|GG657759.1| GENE 2084 2178366 - 2179070 780 234 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570026|ref|ZP_03779051.1| ## NR: gi|225570026|ref|ZP_03779051.1| hypothetical protein CLOHYLEM_06122 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06122 [Clostridium hylemonae DSM 15053] # 1 234 18 251 251 479 100.0 1e-134 MTNECVKCKIEHHAVLFAYLAKHAIELCGEKGKEAVLDAMTAYGRERGARMAANALAHGD ELTTMTNQAYGEWKPDYDGQMEFGQLCTEPTLQTYISRCAWCDAWKKHGLLDYGKYYCVN VDNAVYQGFRSDFVCTPTTTALSWGGERCEFDWGHPLTSDEVKALAEKKKALGTSCMKDF NFHTAHLLHTVGNTLKEQLGAQGEQAVSLALSDYVGTFGQAYLDVLEGVDDEQF >gi|224461045|gb|GG657759.1| GENE 2085 2179057 - 2180319 971 420 aa, chain + ## HITS:1 COG:abgB KEGG:ns NR:ns ## COG: abgB COG1473 # Protein_GI_number: 16129298 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli K12 # 23 416 23 458 481 247 37.0 3e-65 MSNSDHIIAEWIANHEASIAAAADYIFLHPETAYKEKFSSRCLADFLETDGFQIEWKTAG IETAFTASWGYGRPVIGFLAEYDALAEIGHACGHNLLGTGAAAAACALKAYMEAVEMEGT LLVYGCPAEEIMSGKIIMNSQGVFDDLDAAVTWHPFDSNRVSNDIWQSQDIKNYIFRGMS AHASRSPEEGRSALDAAELMNVGVNYLREHVPQDVRMHYAYIDNGLPANVVPDYAKTNYF IRSAKRARTEDASRRVDDCARGAALMTGTEVEIELVGSCKEMKVNRVLAEIYYDAMTRVP VPTYTEEELQFAASISQEAGLQNHGIYFQGLEPLEPEPVPISIGTDVSEVSHTVPTITLS AAAMCKGTPLHHWAAARQAGMSIGKKGMLYAARCMAEGTKQLLEKPEHIQNAWKYHLGTG >gi|224461045|gb|GG657759.1| GENE 2086 2180410 - 2181207 814 265 aa, chain + ## HITS:1 COG:CAC3252 KEGG:ns NR:ns ## COG: CAC3252 COG0345 # Protein_GI_number: 15896497 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Clostridium acetobutylicum # 5 263 4 265 270 204 43.0 2e-52 MITKKIGIIGCGNMGGAILYGALKSGVLPKENAYVYDLNPAMMKKARGWGVNLAKDDEDV CKNSDIVLLAVKPQNAAEALAQCKDALDGKAMMSIVAGVTVERLRAMINGSLRILRIMPN TPAMVFEGAFALCSDNDFSEEELQEAQQIYSSIGVVELVPEVLIDAVCGLSGGGPAYAAM FIEAMADGGVKQGLPRATAYRLAAQTCLGTAKMILEMDIHPGQLKDMVTSPGGTTIEGCE ALEKGGMRAAVMECINAGTEKSRRL >gi|224461045|gb|GG657759.1| GENE 2087 2181306 - 2182496 1440 396 aa, chain - ## HITS:1 COG:CAC2758 KEGG:ns NR:ns ## COG: CAC2758 COG4086 # Protein_GI_number: 15896014 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Clostridium acetobutylicum # 5 264 15 286 288 191 43.0 3e-48 MMAAVLTFVSVPFTAKADSSKVVTLGANLTEEQKKAMYDYFGTSADKVDTIEVTNADERK YMEGIATEAQIGTRTYSCSYVEPTGSGGIQVKVANLTFVTSSMIASTLLTSGVENCNVVA GSPIEVSGTGALTGIMMAYEKASGEELSEDQKATATEELVTTGELAESIGQQEAADLMNE VKQEVIEDGLKDEDEIEGAVNDAADDLNVTLNGDQKAKIVSLMKSISEYDYDVKALKKTL ENLEGKSDGFFSNLWNSIKSFFTGGDSDGGIINNTNDSILGDNAVIDSTIDALKSKDSGD GESFWDKIVNFFKNLFGGDDADDASDDSDKGNASDDADTQDSADDASDAGDAGDTAPGDS SDDPQDADPGSGQDTQGNQDGQSGQDNGGQQDGTVQ >gi|224461045|gb|GG657759.1| GENE 2088 2182640 - 2182969 289 109 aa, chain - ## HITS:1 COG:PM0994 KEGG:ns NR:ns ## COG: PM0994 COG0526 # Protein_GI_number: 15602859 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Pasteurella multocida # 1 93 3 93 106 71 33.0 4e-13 MLHLTAKNFDSEVMHESLPVVVMFYAVWCGKCAMMKPIAEEAEKKYKNRKKIKFCEVEIE ESELLAAEYDTEIVPTFICFKNGRIVGTMRGIIDEEVFHERIQKIFRNS >gi|224461045|gb|GG657759.1| GENE 2089 2183187 - 2183843 712 218 aa, chain - ## HITS:1 COG:BS_ytmQ KEGG:ns NR:ns ## COG: BS_ytmQ COG0220 # Protein_GI_number: 16080042 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Bacillus subtilis # 1 209 1 204 213 210 48.0 2e-54 MRLRNIPRAESVLKACREVMKEPALYRGCWDKVFGNENPVFIEIGMGKGQFLLTMAEQNP DVNFIGIERYSSVLLRAVEKYMERETQAPANIRFICMDAADIADVFAKGEVSGIYLNFSD PWPKARHARRRLTSKEYLSRYDKILACDGVVEFKTDNRGLFEFSLEEIRESDVWEIKERT FDLHGDEAMNRGNVMTEYEEKFSAAGNPICKLRAVRKA >gi|224461045|gb|GG657759.1| GENE 2090 2184021 - 2184332 328 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570033|ref|ZP_03779058.1| ## NR: gi|225570033|ref|ZP_03779058.1| hypothetical protein CLOHYLEM_06129 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06129 [Clostridium hylemonae DSM 15053] # 1 103 1 103 103 108 100.0 2e-22 MDSIVEKLSDIETTAEAIVDHAEAQKFEIEQQIQARRDKFDEDLEADTQKKLERIRAEAS EKVDRILETQRQKNRSTIEALEKEYKENHTAYAQEILKRITEV >gi|224461045|gb|GG657759.1| GENE 2091 2184336 - 2185385 1227 349 aa, chain + ## HITS:1 COG:MJ0219 KEGG:ns NR:ns ## COG: MJ0219 COG1527 # Protein_GI_number: 15668392 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Methanococcus jannaschii # 3 273 51 317 399 63 25.0 4e-10 MGNLMAYSGIVTKVRAMQAKLLTRQDFENIASLRSVPEIISYLKEKPAYADLMNQMDVSL YHRRHVEKILYQSLYDDYTRIFRFAGLEQKKFLKLYLKRYEVDLINYCFRIVFNHYDKPF DLDYKKEFFDKYSQISIEKLITSRSIGELVDNLQSTEYYAPLRKLRDSNAATLFDYDLAL ELYYFSTVWKKRKQILTNKKELEIYTRDCGTNMDLLNIQWIYRAKKYYHMLPPDIYSLTI PNHYRLRIDEFKALVEAPTLEEFEHLLEGTYYARKYHIDNSKTMEQLYKECLMHLYLSDR RGNPYSIATITTYLFLKEEEIYKLTTALECIRYGLSSRETLGYLGGVIQ >gi|224461045|gb|GG657759.1| GENE 2092 2185382 - 2187322 2002 646 aa, chain + ## HITS:1 COG:PH1981 KEGG:ns NR:ns ## COG: PH1981 COG1269 # Protein_GI_number: 14591717 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Pyrococcus horikoshii # 280 637 297 646 659 119 29.0 2e-26 MIVKMKFLSISGPRTDIDRVCDVYLSKYEMQLENAVTELKTTDNLLPFVEMNPYKEPLAK AEEFTSKLSAAGTPADTALSTDEIIALIREVNHDYLELQEKKELLKKNKDELLEKLHVLE PFRPLDFDLHKVLHYRYMQLRFGRIGIDYYRKLEKYLFEDLNAIFLEGTRDENFVYGCYF VANTEASKVDSVFNSLHFERITISDEYIGSPAVAYESLEQDISDLDERIDEIDKNIQELL DDKAGKLLGARKRLEELSNNFDVRKMAARVDDNKEDYYILCGWMGEDDVAAFLKESENDD KVFVVVEEDREKFFGEPPTKLKNPKFFKPFEMFIRMYGLPSSNEMDPTVFVALTYTFIFG AMFGDVGQGLSLFVIGGLLYKLKNMNLAGIISVAGLFSAFFGFMFGSVFGFEDIIQAHWL RPMEAMTNLPFIGQLNTVFIVAIAFGMGLNILSMIFHIINAIRAHDTENIWFSTNGIAGL VFYGFIVFTIVLFMTGHQVPGNILMVIFLGIPVLVFVFKEPLTNLAERNHKKLETGKGMF LVQGFFELFETLLSYFSNTLSFVRIGAFAVSHAAIMEVVLMLSGAQEGSPNWVVVVIGNL VVCALEGLIVGIQVLRLEYYEMFSRFYKGSGREFKPFNNHKKQDKN >gi|224461045|gb|GG657759.1| GENE 2093 2187347 - 2187781 516 144 aa, chain + ## HITS:1 COG:no KEGG:Closa_4195 NR:ns ## KEGG: Closa_4195 # Name: not_defined # Def: H+transporting two-sector ATPase C subunit # Organism: C.saccharolyticum # Pathway: Oxidative phosphorylation [PATH:csh00190]; Methane metabolism [PATH:csh00680]; Metabolic pathways [PATH:csh01100] # 1 144 1 143 143 112 68.0 6e-24 MSLTVKLLLVAALVLSIIIPFGYYLIGEKNKKRYKRAVGTNAFFYFGTFVIASIMMFGGN TAVAADTAAAASSNATGFGYLAAALSTGLSCVGGGIAVASAASAALGAISEDSSALGKSL IFVGLAEGVCLYGLIISFMILGKL >gi|224461045|gb|GG657759.1| GENE 2094 2187783 - 2188091 419 102 aa, chain + ## HITS:1 COG:no KEGG:Closa_4196 NR:ns ## KEGG: Closa_4196 # Name: not_defined # Def: Vacuolar H+transporting two-sector ATPase F subunit # Organism: C.saccharolyticum # Pathway: Oxidative phosphorylation [PATH:csh00190]; Methane metabolism [PATH:csh00680]; Metabolic pathways [PATH:csh01100] # 1 102 1 102 102 147 70.0 1e-34 MKMYLISDNIDTLTGMRLAGVDGVVVHERNELREAIENAMNDKTVGIILLTEKFGREFPD LIDEIKLERTMPLLIEIPDRHGTGRKKDFITSYVNEAIGLKL >gi|224461045|gb|GG657759.1| GENE 2095 2188108 - 2188695 611 195 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3443 NR:ns ## KEGG: Cphy_3443 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 192 1 192 195 112 34.0 9e-24 MTLEEKISHLQSAAMEEARAQGNAIIKQHEEALLSVFEQHRSEAVRQSETRLKAEATNAR QQLNMAASKAQLELKRELSQTQKELKNQLFDEVQTLIYDFMKTDDYKRLLIAYIESAAKF ANGETMTLYINPTDADKAAYLEEHTGMTLTVSKEDFIGGIRAVIPGRNILIDHAFKGAID NEYHKFSFKGGAGIE >gi|224461045|gb|GG657759.1| GENE 2096 2188649 - 2190454 1983 601 aa, chain + ## HITS:1 COG:MTH955 KEGG:ns NR:ns ## COG: MTH955 COG1155 # Protein_GI_number: 15678973 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Methanothermobacter thermautotrophicus # 14 572 1 560 584 648 55.0 0 MNTTNSHSREVRELSNTGTIYGINGPVIYLKGKTDFKMSEMVHVGDQKLVGEVIALDKDV TTIQVYEETSGLKPGECVEATGSAVSVTLAPGILDNIFDGIERPLERIADTGGAFVTRGV SVNALDTDKLWDTHITVAEGDIVQGGTVIAEVPETRAIKHKCMVPPDVSGKVISVVPDGS YTISDTLLTLELPDGTQKDLSMTQYWPIRVPRPVHHRYPASVPLITGQRILDTMFPIAKG GTAAIPGGFGTGKTMTQHQIAKWSDADIIIYIGCGERGNEMTQVLEEFGELVDPKSGNPL MDRTTLIANTSNMPVAAREASIYTGLTLAEYYRDMGYDVAIMADSTSRWAEALRELSGRL EEMPAEEGFPAYLASRLSAFYERAGMMQTLNGSVGSVSIIGAVSPQGGDFSEPVTQNTKR FVRCFWGLDKSLAYSRHFPAIHWLTSYSEYLNDLSGWYSDHVSPKFVDYRNRMMALLNQE SSLMEIVKLIGGDVLPDDQKLILEIAKVIRLGFLQQNAFHKDDTCVSMEKQFKMMDVILY LYKTCRKLVAMGMPMSVLKAENIFEKVIAIKYDVPNNNLQLLDMYKVDIDNFYNRVLEKN A >gi|224461045|gb|GG657759.1| GENE 2097 2190470 - 2191852 1647 460 aa, chain + ## HITS:1 COG:PH1974 KEGG:ns NR:ns ## COG: PH1974 COG1156 # Protein_GI_number: 14591711 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Pyrococcus horikoshii # 1 456 4 458 465 565 58.0 1e-161 MGIEYLGLSSINGPLVVLEGIQDAFFDEIVEFVIDSSTRKMGRIVELYEDRAVIQVFEGT ENMSLQNTHTKLTGHPMEIAVSPDMLGRTFNGIGQPIDGLGPIVSDDMRDVNGLPLNPVR REYPRNYIRTGISAIDGLTTLIRGQKLPIFSGNGLPHDQLAAQIVKQASLGDNSDEQFAV VFGAMGVKHDVAEFFQKTFEESGVADHVCMFLNLANDPVVERLITPKVALTVAEYLAFEQ NMHILVILTDMTSFAEAMREVSSSKGEIPSRKGYPGYLYSELATIYERAGIIEGANGSVT QLPILTMPNDDITHPIPDLTGYITEGQVVLDRSLHGQAIYPPISILPSLSRLMKDGIGAG YTREDHQDLANQLFSAYAKVGEARNLASVIGEDELSPIDKQYLKFGEEFEHHYIGQGPTE NRSMIETLDLGWKLLALLPKEELDRIDTKIIDKYYPGEAE >gi|224461045|gb|GG657759.1| GENE 2098 2191865 - 2192482 721 205 aa, chain + ## HITS:1 COG:PAB2379 KEGG:ns NR:ns ## COG: PAB2379 COG1394 # Protein_GI_number: 14521958 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Pyrococcus abyssi # 7 202 9 207 214 108 34.0 5e-24 MDPREFPTKGNLMLAKNSLALAHQGYDLMDKKRNILLKELMGLIDEAKEIQEEIDSTFTR AYACLQRANIEHGISMVQQLAFTVPIEDSIRIQTRSIMGTEIPYVKYDAKQNDLTYSFST TYESIDIVREAFRDVKELTIKLSMVENAAYRLATNIKKTQKRANALKNITIPMYSNLVYT ITNALEEKEREEFTRLKVIKKMQSK >gi|224461045|gb|GG657759.1| GENE 2099 2192685 - 2193332 477 215 aa, chain + ## HITS:1 COG:SMb20773 KEGG:ns NR:ns ## COG: SMb20773 COG1802 # Protein_GI_number: 16265213 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 3 194 19 211 228 88 27.0 1e-17 MGKRISMTEKVLQELRNEIVNWNYDENDMITEAEISKKYGVSKTPSREALNCLCMEGLLE KIPNKGYLVKGISVTELQSLFQFREILEKASAEMAIHYATDEELKHLKEHTKEQISRIEG GTYQEYSETNMQFHMSVAYLSRNQYLISSLENILNKLRRVLVKDWRVSEAKILMAEHLEL TDALCMRDVERAKQSIEKELGGVGYRLYFQEGKTF >gi|224461045|gb|GG657759.1| GENE 2100 2193390 - 2194412 774 340 aa, chain + ## HITS:1 COG:BS_ansA KEGG:ns NR:ns ## COG: BS_ansA COG0252 # Protein_GI_number: 16079415 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Bacillus subtilis # 1 332 1 329 329 300 45.0 4e-81 MKKVLLLATGGTIAARRGRQGLAPDINCGDFLDMIPEMKKNFLIESRDILNLDSSNIQPE EWQYIAGIVTQALSDFDGVIITHGTDTMAYTASALSYMLQNLKKPVVLTGAQIPIEQMFT DARRNLQTAFAAVEAGIPKVMVAFDDKIINGCRATKVRTLGFNAFESISANYLGEVYADG VHLYDNYKVVHTEEKPFCLKENLCPNVFLLKLIPGTNPDIFECLLNMGYRGIVIEAFGAG GTHFERRNLIPKLKKLIDHGVSIVARSQCLYEKSDFSLYEVGRKLLDCGVIPGRDMTTEA IVTKLMWALGQTEDSSEVWDIFNTDYAGEISLEHNKTACI >gi|224461045|gb|GG657759.1| GENE 2101 2194447 - 2195880 1525 477 aa, chain + ## HITS:1 COG:PA0438 KEGG:ns NR:ns ## COG: PA0438 COG1457 # Protein_GI_number: 15595635 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Pseudomonas aeruginosa # 13 426 2 377 416 115 26.0 2e-25 MQEQEKKIVQQDTVDEEFMLDAVPITKRRSTYSQIMVWVGFGYVATGLFVGGTLAGYGGA PGLNPGDAILAIILGMGALFVMTSLLGVAAQKTGLNLALISRYSYGSKGFIIPMAMMAVM TFGWFSSIVGMVADIWGGLIGNPSGVIVFSPASWGYEAVPDITLEVLIAVILWGLVFTYS AVKGISAIEKVAKFACPIILIVAIVVGVGMMRDGGGFHSFINRANDLGGLGLGTGITAVV GSWIAGAVMGVDMFRFNKNVKAVWICAASCFIFTNPLLNIVGYIGSVSVGQYNYVAWMMG LNVIFAFVGVFAWTTSLWTTDNSELYCNSLYTGPILDAVGIKANRKVLVTICGILGTVLG AIGFYQIFFANFINVLGAMAPPLCAPILADYYLVGHKKYDHRLLHKQPKWRWAGIISFAI GAALGYIFQYVTTLPYNLPAGLFAMLVSLVVYYIIYRFLPDKKEDNKLIETLETNNV >gi|224461045|gb|GG657759.1| GENE 2102 2195907 - 2196668 845 253 aa, chain + ## HITS:1 COG:BH0226 KEGG:ns NR:ns ## COG: BH0226 COG1402 # Protein_GI_number: 15612789 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Bacillus halodurans # 10 253 7 245 249 104 31.0 1e-22 MKKVFLNEFSALEVKELLEHAEDVTAITCFGSCESHGWHCCLGPDYFVPTEVAKRVAEKM DNVVVVPCVPFGTSIHYNQYPMSVTLRYETEIAIAEDIFESLINNGIKHIYILNGHDGNI PALEIAAHNVKDRHRDAKFLYLPDWWTKVGPIMGERFEVWNGLGHGGEGETSIMMAVRPE LVNLEYAKSQVPEKVIEINETTGVIWDIKELTETGATGDPTKASMEKGEQMLDILVGLVA DAIEKMNKTGWTY >gi|224461045|gb|GG657759.1| GENE 2103 2196740 - 2198290 1379 516 aa, chain - ## HITS:1 COG:BH1154_2 KEGG:ns NR:ns ## COG: BH1154_2 COG0642 # Protein_GI_number: 15613717 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 274 509 32 266 274 199 42.0 2e-50 MATKLKNMTNRGRAALILYVAAAAGAAVCSGVYVTSRWFGGWNSNQRFKLTYFLLIALFI IAICLFFHFYPAKEWKDMKRWRIDTVGTEVLTAALLLDLWVWFMGVHSSVVGGHLFYSIW IGTRVKIIVSSVCFYFPVTLIGAGCIVLIARKILQGRLKKTSVIYNVVQSRRAALDFEKA IRLNSRVCLIIATICLAGTAGAVWNSGLHWGDMLGVVVITVLAVVSYICYIKSFRNNKVY KDTASLLRQINAMADGELNAPAIEDEESLLYEGSRKLSSISANLKRIMEKQMQSERMKID LITNVSHDLKTPLTSMIGYIDLLKKERLSDEARDYVDVLALKQEQLKNMIQDIFDLSKST SGEVNLELEELDMKKLLEQTLGDMEDAVAKSGMVIREKVDGADLNIVGDGKKLYRVLQNI ISNALKYSLKGTRIYIEAGREDSQIYVSVKNTASYEMDFSPEEIMERFSRGDKSRNTEGH GLGLAIAESFTKNMGGTMTVEIDGDQFKVRVAFESL >gi|224461045|gb|GG657759.1| GENE 2104 2198262 - 2198966 878 234 aa, chain - ## HITS:1 COG:BH1153 KEGG:ns NR:ns ## COG: BH1153 COG0745 # Protein_GI_number: 15613716 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 2 232 3 232 232 242 54.0 4e-64 MEQYTVLVVDDDKEIVRSLGKLLELEGYKVLKAFNGMEALDMLVTDKVHLIILDVMMPEL NGLSALMKIREKNNIPVIMLSAKTEESDKVIGLSMGADDYVTKPYNTAELMARVKSQLRR YFALGAAAWADSNAVLRTGGLVLDKNTKQVTVDGEPAQLTATEYKILELLMEHPGYVFPA EQIYSRVWQEDVYAGEKTVMVHIRRIREKIEITPKNPKYLKVVWGIGYKIEKYD >gi|224461045|gb|GG657759.1| GENE 2105 2199137 - 2199868 295 243 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570048|ref|ZP_03779073.1| ## NR: gi|225570048|ref|ZP_03779073.1| hypothetical protein CLOHYLEM_06144 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06144 [Clostridium hylemonae DSM 15053] # 1 243 1 243 243 363 100.0 5e-99 MKRLRCLPVLLLITALVLTACSGSPPDEKSLQEIKDKVEGNEQEDETAGQEEEPDGESED ADSSGADETADGAETEEEPVQEPEIPEKITCPTCKGAGQNFCTICEGKGKVEGTQFVPGY KCTYCKGTGYSSCWTCGGTGQADNPEYSAQTGTQDGQAGSAGGSGNRVSPDFSYDRSPSV CTKCKGAGTVMCTSCKGVGKKYTTKSSANYGSGSSSYTETTTCRLCGGSGSAVCTLCGGT GEH >gi|224461045|gb|GG657759.1| GENE 2106 2199940 - 2201850 2196 636 aa, chain - ## HITS:1 COG:all0713 KEGG:ns NR:ns ## COG: all0713 COG0296 # Protein_GI_number: 17228208 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Nostoc sp. PCC 7120 # 7 635 105 752 764 635 47.0 0 MAGKRKKSYEIGELDHYLFGQGNHYEIYKKLGAHKVCSGKKTGVYFAVWAPHAKSVTVVG EFNDWDMEANPMERGEPLGIYTCFIPGAQEGEMYKFCIETYSGQYIFKADPYANYAELRP GTASRVADLSDIAWTDELWLKNRAEWDHRKEPMSIYEVHIGSWKRHLGREDEGFYTYREF AKEITKYVKDMGYTHVELMGIAEHPFDGSWGYQVTGYFAPTSRYGTPKDFAWMINYLHKN KVGVILDWVPAHFPRDAHGLADFDGTPTYEYADPKKGEHPDWGTKIFDYGKNEVRNFLIS NALFWIEQYHVDGLRVDAVASMLYLDYGKQDGQWTANKYGGNKNLEAIDFFKHLNSVVLG RNPGALMIAEESTAWPKVTGDVEEDGLGFSLKWNMGWMHDFTEYMKLDPLYRKGAHNQMT FAMSYAYSENYILVLSHDEVVHLKCSMINKMPGLGADKYANLKAGYAFMMGHAGKKLLFM GQEFAQLREWSEERELDWYLLAEEEHRQMQNWVRDLLHLYKRNKAMYEMDSSWEGFEWVN ADDAQRSIFSFIRHSKDCRKNLLFVCNFTPVEREDYRVGVPKRKQYKLVLNSDESKYGGS GEERPLVYKSVKSECDGRPYSFAYRLPAYGVAVFEF >gi|224461045|gb|GG657759.1| GENE 2107 2201964 - 2204930 3611 988 aa, chain - ## HITS:1 COG:NMB0700 KEGG:ns NR:ns ## COG: NMB0700 COG3468 # Protein_GI_number: 15676598 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis MC58 # 203 614 977 1491 1815 87 26.0 1e-16 MDKYEYRVKTEQMLEYMEKKQYKKAMEIADTVDWRRVKNASMLNTVSEIYESNGEFQKSR DILFVAYDRSPGSRKIVYRLGTLALKINDIEEASDCYEEFVKLAPKDPNQYILKYKILKA QKASYEEQITALEDFKKSEYVEKWAYELALLYHEAGMTAECLEECDDLILWFSEGKYVYQ AMELKMKYKPLTPLQQEKYDSRPGAAKKPQIKKAAAEVPVRKSRPLTAEPEEQEEEPVEQ AYSSPEKIEPVMTKQPGAETSVMDEVLKAVEAEVDVPTDETRKMPVEELEELEALQQKQQ KSPITKVVKGATLQEALANGVKVASGIDIEEKAMAEKTEELRITGQMRIEEILQEWEAKQ KDHAEAIEKQKQEDVERIGKEREEARKRREAERREVEKKAAEAEAARKAAEEEAARKAAE EEAARKAAEEEAARKAAEEEAARKAAEEEAFRKAEEEAARRMAEEEARKAAEAEAARKAA EEEAARKAAEKEAARKAARKAEEEAARKAAEEEAARKADEEKAKKTVPSMTEDIRQLMEE LEHGVAEPEPVEEPDYFEEEDDEPLENMGNLVEDLQMEDDSEEDDDYEDDFGSAFDEDDF DEDFGDEDSDDSYEEDFGGDDFDEGGFNEEDFDEEDFEEEDFDEEDFDEEDFEEDDFESG DGFEEDDFESEDDFFDDDAAEADEPEEEELVIEEPSEEEIQKRIKKSKGGGVPFDTGFVV TGRYDLSATSEIGLKAGLTEEQKKLFSYFVPVRGMSEQIVEVLDNDRRAQREGTSKTGNL LVIGRKGSGKTVLAVDIVKAIQKQRNLKQGKVAIVTGESLNKKELSNIIQKLRGGAIIIE KAGKLNSRTVKELDYLMEKKTGELLFVLEDQRKPLERILTANPDFRKKFTSRLELPVFIN DELVTFGQTYAKENGYKLDEMGILALYSRIDVMQREDHAVTVAEVKDIMDEAISHSQKAN VKHLARRVFGKSTDDSDRIILKEEDFRI >gi|224461045|gb|GG657759.1| GENE 2108 2205344 - 2205412 61 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVGTAIGIITGLTDLYREKRGI >gi|224461045|gb|GG657759.1| GENE 2109 2206047 - 2207960 1856 637 aa, chain - ## HITS:1 COG:AF0817 KEGG:ns NR:ns ## COG: AF0817 COG4880 # Protein_GI_number: 11498423 # Func_class: R General function prediction only # Function: Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats # Organism: Archaeoglobus fulgidus # 150 637 90 618 619 197 30.0 8e-50 MDKREQDILTQLDEKTKNIEVSDSLRPDAVKKTLEENSRKAGKWRLSRAACLAAACLVLA AGVSAAVLRYGGGGDRVQTGKTSPAASGGKIASAKDYDQVYSYIENYNKQMDREEAEFKI EESSEISSEDASFQSARNAGAEADKADAGTREAEYSSTNVRQEGVDEADTAKTDGKYLYV LKDSRQEVAIVEAKEGSLKEYGNIQAEEGTRIEEFYLNPEKKKLVMVCSSTGDSGDSLLR DMNYNGAAEAVTYDVSNPSKPVETGRIKQSGTYSSSRMSGDYVYLFSTYYAGAGIARDDE KSFVPLVNGRPLASDAIYLPQTDMANMYEVVTSLDIEDPDTITDSKAIFSKGGEIYVSNE NIYYYENEWEGSGRTNTTVRRIAYKDGRLKAEAQGTFDGYLNDSFSIDEYKGYLRVAVTA GDTNAVYILDDKLKITGSIEGLAKDERIYSARFMGDTGYFVTFRETDPLYSVDLSDPEKP EIKGALKIPGFSDYLHFYGENLLIGIGMDVDEKTSVTGGVKLTMFDISDMTDVKEKDTYV LDNVYGTDVSYDHRAALIDAGKNMIGFPGYEAGGQKYFLFSYDSREGFKCLLDEEINGSG MMAARGIYIGDVLYIVQGNVVESYSLGDYSKIDDIIL >gi|224461045|gb|GG657759.1| GENE 2110 2207988 - 2208452 517 154 aa, chain - ## HITS:1 COG:BH2026 KEGG:ns NR:ns ## COG: BH2026 COG1595 # Protein_GI_number: 15614589 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 14 149 30 169 179 67 32.0 7e-12 MFAQLYETVYQDLYRFALCLMKNGHDAEDAVSEAVVSAYENIGKLRKAEAFKSWIFTILA NVCRKRLRKEAEKQKNQQPFDTYWEEAQEQPDYGLALDVRQAFFVLEEEEQLVIGLSVFG GYNSGEIGAMLKLNASTVRSKRKRALEKMECVLR >gi|224461045|gb|GG657759.1| GENE 2111 2208656 - 2210935 2812 759 aa, chain - ## HITS:1 COG:ybhJ KEGG:ns NR:ns ## COG: ybhJ COG1048 # Protein_GI_number: 16128739 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 758 9 757 761 928 60.0 0 MVKLYDKGVYLLNGTKIVEDAAEAAAGTGQAVSQEEAAKNTMAYSILEAHNTSGNMDRLQ IKFDKLTSHDITFVGIIQTARASGLERFPIPYVLTNCHNSLCAVGGTINEDDHMFGLTCA KKYGGVYVPPHQAVIHQYAREMLAGGSRMILGSDSHTRYGALGTMAMGEGGPELVKQLLG KTYDIKMPGVVGIYLDGEPARGVGPQDVALAIIGATFANGYVNNKVMEFVGPGVGKLSAD FRIGIDVMTTETTCLSSIWKTDDKIKEFYEIHGRAEDYRELNPGAVTYYDGMVYVNLSEI KPMIAMPFHPSNVYTIDEVNANLKDVLHDVEQKALVSLDGAVDYSLQDKIVDGKLYVEQG IIAGCAGGGFENICAAADIIRGKYIGADEFTFSVYPASTPIYMELVKNGAVADLMQAGTI VKTAFCGPCFGAGDTPANNAFSIRHSTRNFPNREGSKLQNGQISSVALMDARSIAATAAN KGFLTSAADIDVEYKGQKYHFDKEIYANRVFDSKGEADPSVEIKFGPNIKDWPEMPALPE HLVLKVVSEIHDPVTTTDELIPSGETSSYRSNPLGLAEFALSRKDPAYVGRAKEVQKAQK AIEAGKCPLEVLDELKPVMGEVRKMFPDAGEGNIGVGSTIFAVKPGDGSAREQAASCQKV LGGWANIANEYATKRYRSNLINWGMLPFITTEDHQNLSFKNGDYIFVPDIKKAIEDKTAE IKAYVVGSGLKEITLSVGDMTDAEREIILKGCLINYYKG >gi|224461045|gb|GG657759.1| GENE 2112 2210948 - 2212033 1167 361 aa, chain - ## HITS:1 COG:CAC3236 KEGG:ns NR:ns ## COG: CAC3236 COG2508 # Protein_GI_number: 15896482 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Clostridium acetobutylicum # 171 352 134 307 312 83 28.0 7e-16 MLSNQVLHKTVQDIRRITELEGSVWDLRGTCLVMTNEKQTALYKKVSEFIKNAEETEEYI EDGAGLFLVSGEESPEYVLALCGDQADIATAGRLGASQLENLISAYRERMDKNRFIQNLI LDNLLLVDVYNQAKKMKIPAELRRAVFLIEPKHEGENLVLETLKGLYATGSRDFVTAVDE GHIILVKALEKTEDYKDMNQTAKVIADTLNMEAMVSVRVAYGTIIEELKDVSKSYKEAAM ALEVGRVFYAEKNILAYSELGIGRLIHQLPASLCEMFLKEVFEGGGAGEFDEEELATVYT FFDNNLNISETARQLYVHRNTLVYRLEKIQKKTGLDVRVFDDALTFKIAMMVANHMKYIK E >gi|224461045|gb|GG657759.1| GENE 2113 2212417 - 2213742 1124 441 aa, chain + ## HITS:1 COG:lin2192 KEGG:ns NR:ns ## COG: lin2192 COG0534 # Protein_GI_number: 16801257 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 8 434 12 437 443 184 26.0 4e-46 MKRSADTSLFSTFLKYVLFNVTGMVGLSCYILADTLFIARGLGPDGLTALNLAIPVYSFI HGTGLMAGMGGATRYSIQKAAGSNAAARRTFTTAVITALVLSSAFVLAAVLGDRALTSLL GAGGSVFEMTRIYLKIILLFAPAFMLNNVVLCFVRNDGSPNLSMAAMLAGSFSNIILDYV FIFPLGMGIFGAVIATSLAPVISLAVLSLHLLSSRSGLQFERPAHIVRSSAGLLSLGLSS FIAEAASGIVMITFNFIILSLKGNLGVAAYGIIANLSLVVTSIYTGTAQGSQPLLSEAHG AGRQDSIRRVYTYAVTLALGFSVMIYGLLALLRNPVISLFNQNKDTALAAMAGQGILLYF TAFLFVGVNIISAIFFSCVEQARLSFTLAMMRGLVLLLPLVILMSRLFGMTGVWLSFPAT ELLTCAAAVIFVRRYWKKQRT >gi|224461045|gb|GG657759.1| GENE 2114 2213789 - 2214901 1482 370 aa, chain - ## HITS:1 COG:BH1140 KEGG:ns NR:ns ## COG: BH1140 COG3839 # Protein_GI_number: 15613703 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Bacillus halodurans # 1 368 1 364 365 475 65.0 1e-134 MASLSLKHINKVYPNGFEAVKDFNLEIDDKEFIIFVGPSGCGKSTTLRMIAGLEEISSGE LKIGDKVVNDVEPKDRDIAMVFQNYALYPHMTVYDNMAFGLKLRKTPKDEIDKMVREAAR ILDLEQLLDRKPKALSGGQRQRVAMGRAIVRDPKVFLMDEPLSNLDAKLRGQMRIEISKL HQRLGTTIIYVTHDQTEAMTLGTRIVVMNAGIVQQVDTPQTLYDYPCNLFVAGFIGSPQM NFIDAVCKVNGDKVVLQAGPSAIELPPAKAKKLIDGGYDGKTVVLGIRPEDVHDEQMFIE SSPNTVIEATIRVYEMLGAEVYLYFDYEGSNMTARVDPRTTARTGDTVKFALDAEKIHVF DKETELTITN >gi|224461045|gb|GG657759.1| GENE 2115 2215065 - 2215901 955 278 aa, chain - ## HITS:1 COG:CAC0307 KEGG:ns NR:ns ## COG: CAC0307 COG0313 # Protein_GI_number: 15893599 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Clostridium acetobutylicum # 2 275 3 276 282 276 47.0 3e-74 MSGTLYLCATPIGNLEDMTFRAVRVLKEADLIAAEDTRNSIKLLNHFEIKTPMTSYHEYN KIEKGQKLVEMLRRGSDIALITDAGTPGISDPGEELVKMCYEADVTVTSVPGAAACITAL TLSGLSTRRFAFEAFLPSDKKERREILEELAGETRTVVLYEAPHRLVRTLKELAQTMGDR RAAICRELTKKHETAFVTTLEEALAYYEATEPKGECVIVVEGKSRQAVREEARARWEELS VEAHMEQYLASGMSKKDAMKQVARDRGIGKRDVYQALL >gi|224461045|gb|GG657759.1| GENE 2116 2215937 - 2216674 867 245 aa, chain - ## HITS:1 COG:CAC0306 KEGG:ns NR:ns ## COG: CAC0306 COG4123 # Protein_GI_number: 15893598 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 5 244 4 243 244 215 43.0 8e-56 MITDLKPGERLDDLQIKGYEIIQKPGTFCFGMDAVLLSSFASVREGEAALDLGTGTGILP ILLEAKNEGSRYAGLEIQEESADMARRSILHNGLEDKIDIVTGDIREAAGLFGAASFHVI TTNPPYMIGDHGLKNDKEALYIARHEALVSLEDILRESAKILRPKGRFYMVHRPFRLPEI FAKMCSFKIEPKRMRLVYPYVDKEPNMVLIEGLKDGRPRMQAEPPLIVYEKSGEYTEELR SLYGV >gi|224461045|gb|GG657759.1| GENE 2117 2216664 - 2217575 1201 303 aa, chain - ## HITS:1 COG:CAC0301 KEGG:ns NR:ns ## COG: CAC0301 COG1774 # Protein_GI_number: 15893593 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Clostridium acetobutylicum # 1 256 1 256 303 331 65.0 1e-90 MTKVIGVRFRPAGKIYFFAPGKFNIKTDDKVIVETARGVEFGSVVTGPKEVADERITQPL KSVIRIATKEDVEKEARNREKEKEAFEICLEKIRKHGLEMKLIDAEYTFDNNKVLFYFTA DGRIDFRQLVKDLASVFRTRIELRQIGVRDETKIRGGIGICGRPLCCNTYLTEFAPVSIK MAKEQNLSLNPTKISGVCGRLMCCLTNEEETYEELNSRLPSVGDHVTTPEGLHGDVQSVN VLRQQVKVIVTLENDEKEIREYKSAELKFKPKRRKKDVRLTKEELAELKALEEKNGVSKL DDN >gi|224461045|gb|GG657759.1| GENE 2118 2217580 - 2218569 1137 329 aa, chain - ## HITS:1 COG:BS_holB KEGG:ns NR:ns ## COG: BS_holB COG0470 # Protein_GI_number: 16077099 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Bacillus subtilis # 13 328 15 328 329 144 30.0 2e-34 MGSFKDVVGHKNIIDYIRSAVQEDKVSHAYILNGEKGAGKKMLATLFATTLLCEKAGPDP CNECHSCRQAESGNHPDIIRVTHEKPNTISVDDIREQVNGTIMIKPYQGPYKIYIIPQAD MMSVQAQNALLKTIEEPPEYAVIMLLTENADTLLPTIASRCVMLKLRNIKDTLIKKYLME TMEVPDYKADMCTAFAQGNMGRAILLANSEYFNEIREEAVQLLKYIPEMELSEIVDAVKR ITTYKLEINDYLDIIMVWFRDVLLYKATKDMDRVVFKDQIKYIKEQARKSSYEGIELILD SLEKAKTRLKANVNFELAMELLFLTIKEN >gi|224461045|gb|GG657759.1| GENE 2119 2218622 - 2220079 1157 485 aa, chain - ## HITS:1 COG:FN0501_1 KEGG:ns NR:ns ## COG: FN0501_1 COG1982 # Protein_GI_number: 19703836 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Fusobacterium nucleatum # 9 472 17 475 503 263 33.0 8e-70 MNTLYDKLNEYSDSDFYGFHMPGHKRNTKLLRTDVPYHIDITEIEGFDDLHHADGILRAA QERAAFVYQAEETHFLVNGSTVGILSAVAGVTKKGDTVLVARNCHKSVYHAIYLNELDPV YLYPGFSTDTCLNTEISAGDVKRALERHPHIRAVIIVSPTYDGVVSDVEAIAAAAHEKGI PLIVDEAHGAHFGFHPYFPDNSNTKGADIVIHSLHKTLPSLTQTALLHMNGKLVKRRKVR DYLHMLQTSSPSYVLMASIDSCIDMLENGGRGLFEPYVKLLERTRTELKGLHCLKLAETA HFDRSKIVISAKDSDMTGRMLYKALLEDYHLQMEMAAGTYVLAMTSVADTEDGMDRLVCA LREIDRETGRRMKKRPDKAVSGRPGIPFGGILPRLEVVFCSFAAAALAEGTDISEKGHAK FVPREESAGCISLEYAYLYPPGTPLIVPGEKVSEEAAHMLQWYQDMGYSVEGPARERYIE VWMQE >gi|224461045|gb|GG657759.1| GENE 2120 2220144 - 2221493 1700 449 aa, chain - ## HITS:1 COG:BH3343 KEGG:ns NR:ns ## COG: BH3343 COG0166 # Protein_GI_number: 15615905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Bacillus halodurans # 1 449 1 449 450 608 64.0 1e-174 MENKVTFDYSKAKTFICDHELESMKNIAEQAKAELLSREGAGNDFLGWIDLPVDYDKEEF ARIKKAAKRIQSDSEVLLVIGIGGSYLGARAAIEFLRHNFYNMVSKEIRKTPEIYYVGNS ISSTYLKHLIDVIGERDFSVNIISKSGTTTEPAIAFRIFKEMLEKRYGKAEAGKRIYATT DKERGALKNLADEEGYDTFVVPDDVGGRFSVLTAVGLLPIAVSGADIDRLMEGAASGREM ALNTPFEENDAMLYAAVRNILHRKGKAVEILANYEPSLHYVSEWWKQLYGESEGKDQKGI FPASVDLTTDLHSMGQFIQDGSRVMYETVLNVENSAEEIILHEEPVDLDGLNYLAGKSVD FVNKSAMNGTILAHTDGNVPNLMVNIPKQDEYSLGQLFYFFEFACGVSGYILGVNPFNQP GVESYKKNMFALLGKPGFEKEREELLKRL >gi|224461045|gb|GG657759.1| GENE 2121 2221559 - 2222437 1098 292 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570064|ref|ZP_03779089.1| ## NR: gi|225570064|ref|ZP_03779089.1| hypothetical protein CLOHYLEM_06160 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06160 [Clostridium hylemonae DSM 15053] # 1 292 22 313 313 531 100.0 1e-149 MLEFILDKYILFVLMGVMTVLGIISKLIVNVTLKRMVHAAGNMNKSTHPLMRLVRAKFEH ACMISDTVENVNVFVDKYLYEYRTAGMKLHSWRRMEKAAAGMCLLIGAAGAALEYVVNGM QDMVLKTGAAGAGLAILVFLFHLTTDENYRLEAVRNYMVDYLENVCLRRYEKTYQKELKV MAPESPAVEFGAVSDKAIEAEEKKDDRGTPERPMPAREVPSPSTKPEITPPVMPEPYEVP DVKDPIKAIVETAVKEEIKEPVQKREEKKPEKKPEPMAKDMLIRQILEEFMA >gi|224461045|gb|GG657759.1| GENE 2122 2222568 - 2223260 681 230 aa, chain - ## HITS:1 COG:CAC2117 KEGG:ns NR:ns ## COG: CAC2117 COG0775 # Protein_GI_number: 15895386 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Clostridium acetobutylicum # 2 227 3 227 230 184 46.0 1e-46 MIGIIGAMEEEVAALKEAMEIEETVTRASMEFCRGILCGKEAVVVQSGIGKVNAAVCAQI LVDCFHTDMIINTGVAGSLDASIDIGDMVISTDALYHDVDASFVGDPVGQVPRMDTLAFP ADEELVQKAVEANRQVNPDIHTFTGRIASGDQFISSGAVKDKIKENFRPLCVEMEGAGIA QTAYLNKVSYVIIRAISDKADNSAAMDYPAFEELAIAHSIRLVKQLVENI >gi|224461045|gb|GG657759.1| GENE 2123 2223495 - 2223737 261 80 aa, chain + ## HITS:1 COG:no KEGG:Closa_0054 NR:ns ## KEGG: Closa_0054 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 75 1 75 82 105 66.0 7e-22 MEYRPHGVCSRLIHLDVEDDIIKNVQFVGGCSGNTQGIARLVTGMKVDEAIARMEGIDCG GKGTSCPDQLAKALRAATQR >gi|224461045|gb|GG657759.1| GENE 2124 2224031 - 2224492 200 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570067|ref|ZP_03779092.1| ## NR: gi|225570067|ref|ZP_03779092.1| hypothetical protein CLOHYLEM_06163 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06163 [Clostridium hylemonae DSM 15053] # 1 153 8 160 160 301 100.0 1e-80 MGFTLILFLSLLVTNVTETKASSDIPKVDGSYLTYNEESIGYALKITRGEDLLNGYSKIV RLGPGCIYVGGTTVAAHTVAKVKIAVLVERIKENGVSWEYYENWSKENFDSDRVSANRQL NVDGGYFYRVRCTHSANSDVSSSFTDGIFIEEP >gi|224461045|gb|GG657759.1| GENE 2125 2224449 - 2224568 64 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRYVSLYMRAKVSMEVEDEKEDNINGFYFDIIPEFASY >gi|224461045|gb|GG657759.1| GENE 2126 2224585 - 2225409 399 274 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570068|ref|ZP_03779093.1| ## NR: gi|225570068|ref|ZP_03779093.1| hypothetical protein CLOHYLEM_06164 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06164 [Clostridium hylemonae DSM 15053] # 1 274 1 274 274 441 100.0 1e-122 MKDKLDNTEQLIQKEFHNEADSIEKDVETICADEVVTEKITDEIRSNVDKNIDQYEKERI YSLLPEEDKKALEIGRRIQRKKPGKRKKMYLSLAAALVLAMAIGVTSLGGPERVVKLIKQ SVGQREVRKTNRGYVKEYKEENEEEAYQKVKDVFGCDIVKIIPCVKGMKFQNSKIDETLQ ISELYYKLNGELISYYVNASYSATSWGIDVEDKVLNNRTETINGCTLEIKEYSTEKTGTQ RYSVEFEYQGLEYFLIGTLNEEELKLILRNLYFF >gi|224461045|gb|GG657759.1| GENE 2127 2225578 - 2226645 862 355 aa, chain + ## HITS:1 COG:CAC2231 KEGG:ns NR:ns ## COG: CAC2231 COG0707 # Protein_GI_number: 15895499 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Clostridium acetobutylicum # 3 350 5 352 359 391 53.0 1e-108 MKRIILTGGGTAGHVTPNIALLPRLKELQYDIHYIGSYNGIEKELIEQFGIPYHGISSGK LRRYFSVQNFTDPFRVVKGLGEAKRLVKILKPDVIFSKGGFVSVPVVMAGKRRKVPTIIH ESDMTPGLANKLSIPSATKVCCNFPETLEHLPAGKAVLTGSPIRQELLSGDKYKAREFLG FKSDKPVILIIGGSLGSVAVNDAVRSILPELLNSYQVVHLCGRGKIDESLKGLEGYAQFE YIKEELKDLFALTDIVISRAGANAICELLALHKPNLLIPLSANASRGDQILNARSFERQG FSAVLEEEELDKDVLLSSINRLYERKDSYIEAMKKSSQQNSIDTIIDLIESVVNK >gi|224461045|gb|GG657759.1| GENE 2128 2226701 - 2227243 437 180 aa, chain - ## HITS:1 COG:BS_yhdM KEGG:ns NR:ns ## COG: BS_yhdM COG1595 # Protein_GI_number: 16078017 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 9 170 1 156 163 59 27.0 3e-09 MEIEFIGRVAFDAIYEENVKIVYKTALRYTGNHHAAEEIAQNVFVKLYTVMEHVNLSAVR SWLIVTTRNMSLNYKRDGKREILSDEMHEDWTMESSEDEFEKRLQEKEYKEFADHIFEEL YRINERWYEAVTLTYCLEKSQREVAEIMGVSVEVLHSMLYRAKKWIRKNYEDQFELLNKA >gi|224461045|gb|GG657759.1| GENE 2129 2227264 - 2227671 539 135 aa, chain - ## HITS:1 COG:BH1189 KEGG:ns NR:ns ## COG: BH1189 COG0537 # Protein_GI_number: 15613752 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Bacillus halodurans # 3 118 4 120 142 124 48.0 6e-29 MREENCIFCKLANGEIPTATLYEDEDFRVILDASPAAKGHALIIPKEHYADLYELDDEVA AKVLVLARKMIKKLTDILGCDGYNIVQNNGEAAGQTVFHFHMHLIPRHKNDQVGLGWKMG ELKDEDVEDILAKIN >gi|224461045|gb|GG657759.1| GENE 2130 2227758 - 2228495 441 245 aa, chain + ## HITS:1 COG:atoS_3 KEGG:ns NR:ns ## COG: atoS_3 COG0642 # Protein_GI_number: 16130156 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 13 241 36 270 278 121 28.0 1e-27 MFTTTDFDKLQQIMDESPEKKELLQKLLESQKMTISSISHEIRNPLTLVYSTLQLIEAQH PEVSTYKYWDSMRSDVEYMTILLEELSAFNNGESLSLSEIDCSSFLRPVVLSFAASLAES SIEFTSKLEPDLPVICGDAVKLREVILNLLQNAKDAVNPDGAIYFHAFTEAGKLCISVRD NGCGIPQEDMEHIFEPFVTYKQGGTGLGLAIGRRIASAHKGTLSAVSVPGGPTVFTLSLP IEKNA >gi|224461045|gb|GG657759.1| GENE 2131 2228424 - 2229050 572 208 aa, chain - ## HITS:1 COG:RSp1525 KEGG:ns NR:ns ## COG: RSp1525 COG0705 # Protein_GI_number: 17549744 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Ralstonia solanacearum # 11 190 208 390 569 106 35.0 3e-23 MKNIKMEAPCTAVIAAVNVIVFFVLSFGGMTEDAGYMLSHGAMYVPYITERGEWYRLFTS MFLHFGFQHLMNNMVIFVLLGWNLEVEIGKIKYLIIYFASGLCGNVVSMAGDMRTGEYVV SAGASGAIFGVIGALLYVALRNRGRIGNVSGRGILFMVIISLYYGFTSGGVDNLAHIGGL VSGFLLGVLLYWKRKSKNRRSAGNRYGR >gi|224461045|gb|GG657759.1| GENE 2132 2229144 - 2229878 802 244 aa, chain - ## HITS:1 COG:no KEGG:Closa_0140 NR:ns ## KEGG: Closa_0140 # Name: not_defined # Def: FHA domain containing protein # Organism: C.saccharolyticum # Pathway: not_defined # 7 172 16 179 437 82 30.0 1e-14 MERKISIETEGIYREDYQIRMLRANPVAGFLKIQGQGVDGKTRYDYEVSGKISMKAMYER GKLSSRDIELFLHQLMALIKETEKYLLNIHCILLEPEYIFYEEETFYFCYYPPEEHDIWE ALKLLADYFVKHADYKDRACVQMVFMLHKGVMEENYSLEKLAEQCMDAAGKNTFEEWKKE NMKTEDTPPAYDRQEHDWIAEQEMAGTIMEETENMWTPVKRFLNRHRKPKWGDFDGLYIE EEEL >gi|224461045|gb|GG657759.1| GENE 2133 2229884 - 2230285 377 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570075|ref|ZP_03779100.1| ## NR: gi|225570075|ref|ZP_03779100.1| hypothetical protein CLOHYLEM_06171 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06171 [Clostridium hylemonae DSM 15053] # 1 133 1 133 133 239 100.0 6e-62 MLKERRLNGSMTVEMSFIMPVILLLIMQCVTAAFYFHDKNIISGAAYETAVVGSTKAHEK DGAKEGELKRLFRERVNGKCILFAGAEADISITENAVSVTAAASGKGRKLSVVKKARVTE PEAYIRDMRRIRK >gi|224461045|gb|GG657759.1| GENE 2134 2230287 - 2230718 384 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570076|ref|ZP_03779101.1| ## NR: gi|225570076|ref|ZP_03779101.1| hypothetical protein CLOHYLEM_06172 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06172 [Clostridium hylemonae DSM 15053] # 4 143 1 140 140 204 99.0 1e-51 MWKVSQIICIGALAGMSVSDMIFRKVPEGMLVTAGVGALLYQCMFRTADGWLVLAGAGVG GCFLLLSKVTKEGIGYGDSWGILILGIYLGVWNLLGLLLGAFALLLPAGMILFMTGRCKR RTSLPFYPFLTGGYILVLLTGVG >gi|224461045|gb|GG657759.1| GENE 2135 2230706 - 2231512 489 268 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0071 NR:ns ## KEGG: bpr_I0071 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 12 267 32 306 306 148 34.0 2e-34 MNKNRLPSQKIYDYHTGRVSASASVKASITVEAAMAVPIFFLAVVCLLYLMEMAAIQTAV RSGLQYAGKGLAKEAYVLPAAVPSKLEADVVNAIGADRLNRSIVEGGSGGIHCHKSWMSP STGICSLAAEYRIKLPLPLFRLPSPSYEIKMKIKGWTGYVKAGLSGEREKTVYVTETGIV YHEDYHCTHLELSIRPVQASDVPGLRNEDGGKYYPCEHCAGSGSGAVFITDSGNRYHSSL GCSGLKRTIYAVPVSEAVGKGACQRCGK >gi|224461045|gb|GG657759.1| GENE 2136 2231596 - 2232963 1322 455 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0070 NR:ns ## KEGG: bpr_I0070 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 3 454 16 485 487 175 28.0 4e-42 MKKGEVTVYLSLVFILLVSFAGALLESASVQNAKNYRRADMDRAVECLFAEYQRELLEEY AIFALEASYETGSYTEQNIKERLSFYGAGQMEHKIKRIQFLTDNGCRPFYEQVSAYMRHK YGLNAMEDKLGAASVWKEQEEKAGVYEQEDKEAQNALDELLSENDSELPKEENPLEHAKQ LKQTPLLSLVSPKDMHISEKSVPPEGLLERRERNKGYGDFSDVEEEEGAVSRLLLGEYLL EHFNCAADKGEKTGALDYELEYILNGQPGDRENLEKTARKLLLLRFVPNYAYIQTDSEKK AEAKAAALALCSLIALPAAAEAAAQGILLAWAFGETIIDIRALLKGSKVPLVKSKESWQL QFSSLLTLGTDTDYTEGKDSEDGLDYREYMRILLFLTDSGDTGLRTLDMIEQNLRREKGL AFFKADQCVSRMEIETSVPLRRGITYQFPTYYGYR >gi|224461045|gb|GG657759.1| GENE 2137 2232986 - 2233162 270 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570079|ref|ZP_03779104.1| ## NR: gi|225570079|ref|ZP_03779104.1| hypothetical protein CLOHYLEM_06175 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06175 [Clostridium hylemonae DSM 15053] # 1 58 3 60 60 62 100.0 8e-09 MWRIQYVIHVLKDKKGIGVVEVILILVVLIGLVIIFKSQLTSLVQAIFQKITSESSGI >gi|224461045|gb|GG657759.1| GENE 2138 2233177 - 2234448 1384 423 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0034 NR:ns ## KEGG: Cphy_0034 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 52 423 102 485 485 190 32.0 1e-46 MSCSLYRRLLSWTKDNKNRSVAAVSVLLLMAAGILFLIIDGKAYVTELDGTISRNRYGEG KKTEQLEVSVQGGGEREPLQIEVEEQQYDPREIKEVFDQAVSQMERRILGNNKSLDRIEE NMDLIQEIPGRPLAVEWELDRYDIMNVYGEIQQEALDKKGSLIHLKAVLTYKEDPRKQAL YECTAMVFPKTVKGSAALVEKVKNAVRQKEENTRTEKELKLPDRVDEKEVSYYREMDMRG AVLVVMAVLTAILLYALEKQNRYKQEKEKRLQMLQDYPELVNKFTLFLGAGMTVRNTWRK IVRDYEKQTEEWGVRYAYEEMKVTLNEMQSGITEAESYERFGRHCKVQEYVKFGALLSQN LRKGTKDLVHLLRMDAVQAFEERKTRARRLGEEAGTKLLLPMFLMLTVVLVIVVVPAFLS MQM >gi|224461045|gb|GG657759.1| GENE 2139 2234385 - 2235140 575 251 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0033 NR:ns ## KEGG: Cphy_0033 # Name: not_defined # Def: Flp pilus assembly protein TadB-like protein # Organism: C.phytofermentans # Pathway: not_defined # 17 251 13 247 247 180 40.0 4e-44 MRLRTEASCWQQDIKPEEYVQGILKSTVITVLTAWLYYRSAIAVPLLAPVWIWQYRIWKK ECLRRKSSSFQLQFKDAIQSLSSALSTGYSVENAWKEAEKELKLLYRENDRIRKELHIIV SQIRVNVPMEQIMEEFAERVRQEDVRNFTAVFAAAKKSGGDMVAIIRNTAGQIGDKVEVK REIDTILASREYEFKVMSAVPYVIIGYMSLSFPEFMQNLYGNVLGTGVMTVCLAAYIGAC CLGQKIIRIEV >gi|224461045|gb|GG657759.1| GENE 2140 2235097 - 2236299 1262 400 aa, chain - ## HITS:1 COG:PM0849 KEGG:ns NR:ns ## COG: PM0849 COG4962 # Protein_GI_number: 15602714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Pasteurella multocida # 12 383 23 394 425 323 46.0 3e-88 MIQAEQLHARIMEELDMTREIEDEELTDLIHRVLQEACIQEYITLRERTALGKELFNAFR KLDLLQELLEDERITEIMINGTKNIFIEQDGRLFQTEKRFTSRDKLEDVVQQIVSGANRT VNEASPIADARLPDGARVNVVLAPVALDGPIVTIRKFPKDTITMEQLIAWNSVSREAADF LTLLTAAKYNIFISGGTGSGKTTFLNALSQYIPGDERIITIEDNAELRIMDIPNLVRLEA RNANVEGTGEITIRSLIKTALRMRPDRIIVGEVRSAEAIDMLQALNTGHDGSLSTGHANS PKDMLSRLETMVLMGMDLPLPAIQRQIASGVDIIVHLGRLRDKSRKVLEIVEVLDYEEGG ITLRPLFAYEETGDTDGRIQGEWRKINEIAHRGKLLAAGY >gi|224461045|gb|GG657759.1| GENE 2141 2236296 - 2237216 699 306 aa, chain - ## HITS:1 COG:CAC0037 KEGG:ns NR:ns ## COG: CAC0037 COG1192 # Protein_GI_number: 15893335 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Clostridium acetobutylicum # 1 290 1 294 361 84 23.0 3e-16 MGSKRLVICDPEDGYASALASYFMRRKELAFQVYVCKSLQKVQKLQEEEHIDYLIVPADC GRKEREQIAADKKFILTVSGQEQVGKDEIPIQKYQSGEAILTEIINSCGLYDDTGELFFR TVKKTRGTLIGVFSPVHRIGKTSYAIELGQRLASKSDVLYVNMEIYGGRGGVFGENPSYT LADILYYSRQESKNLPLVLSAMTGRLKNMDCINPMPVSEDVKEVTPQEWTGLIRQIMENS IYETVILDVDEGLRGVYDILRLCTEVHMPAAEDEMSCSKVRQFEEELQLLGYEDVLQKLN RKEQKG >gi|224461045|gb|GG657759.1| GENE 2142 2237446 - 2237655 194 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570084|ref|ZP_03779109.1| ## NR: gi|225570084|ref|ZP_03779109.1| hypothetical protein CLOHYLEM_06180 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06180 [Clostridium hylemonae DSM 15053] # 1 69 17 85 85 124 100.0 2e-27 MPEERPHFVVNFIIRAILGIAIIFFVNEFLSGKGISLHVGMNPVTFLTSGVLGIPGVALL YGITFYQNL >gi|224461045|gb|GG657759.1| GENE 2143 2237778 - 2238014 213 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570085|ref|ZP_03779110.1| ## NR: gi|225570085|ref|ZP_03779110.1| hypothetical protein CLOHYLEM_06181 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06181 [Clostridium hylemonae DSM 15053] # 1 78 1 78 78 144 100.0 3e-33 MKLFQRGKGAEEDIYRRLSFDPDSNTLVEEIAQARQEIEDAYENFQNASDPDLIDCYIYR GNAAWKRYRFLLRQAKMI >gi|224461045|gb|GG657759.1| GENE 2144 2238094 - 2238582 640 162 aa, chain - ## HITS:1 COG:FN1902 KEGG:ns NR:ns ## COG: FN1902 COG2131 # Protein_GI_number: 19705207 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Fusobacterium nucleatum # 5 151 15 159 174 191 60.0 6e-49 MGDKRKDYISWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPIGCSDDE FPWDREGEDPLETKYVYTVHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE VIFDCNKYEDTAAVKASMRMFDAAGVRYHQYHRTEREVKIKL >gi|224461045|gb|GG657759.1| GENE 2145 2238613 - 2239242 875 209 aa, chain - ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 1 209 1 209 209 296 66.0 1e-80 MSKVQVMEHPLIQHKISYIRREDVGSRDFRAVVGEIAALMCYEATWDLKLKDVQIKTPIC EMTGKELSGKKMAVVPILRAGIGMVDGILNMIPAAKVGHIGLYRDPETFEPVEYYCKLPA DCDEREVFVVDPMLATGGSSVAAIRMLKEKGVKNIRFMCIIAAPEGVERMTKEHPDVDLY IGALDDHLNDQKYIVPGLGDAGDRIFGTK >gi|224461045|gb|GG657759.1| GENE 2146 2239263 - 2240315 1052 350 aa, chain - ## HITS:1 COG:CAC2882 KEGG:ns NR:ns ## COG: CAC2882 COG0009 # Protein_GI_number: 15896136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Clostridium acetobutylicum # 1 349 1 350 350 317 46.0 3e-86 METKIIKIDKKQINKSMIQEAGDILKRGGLVAFPTETVYGLGADALSEEAAAKIYAAKGR PSDNPLIVHITNMGDLEKVAEKIPAEAVKVAGKYWPGPLTMIFHKKDIVPYGTTGGLDTV AVRMPSHEIAREVIDAGGGFIAAPSANTSGRPSPTTAQHVKEDMDGRIEMIVDGGPVEIG VESTILDMTVTPPMILRPGAVTEEMLTELIGAVAVDHTLITADSTEAPKAPGMKYRHYAP NAELVIIEGPASKVTEEINRLARARQKEGYKVGIIGTEETVSGYTSGDVKSIGTREDEST IAGRLYAVLREFDDDGVNYIYSESFATGGIGSAIMNRLLKAAGHHVINIQ >gi|224461045|gb|GG657759.1| GENE 2147 2240336 - 2241016 768 226 aa, chain - ## HITS:1 COG:BH0239 KEGG:ns NR:ns ## COG: BH0239 COG0860 # Protein_GI_number: 15612802 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus halodurans # 38 220 41 226 238 127 39.0 1e-29 MRKKVEFLLLILLLAGLITVSRNIGKYVSGDKVEKGKQVVVIDSGHGGNDPGKIGVNDAN EKDINLAIAKKVEKRLKKNKIEVVMTREDDSTLAKEGDTNKKVQDMKARVQLINETKPAM VVSIHQNSYQDADIRGAQVFYYSHSQDGKNTAELMQKALLAVDKDNTRQAKANDTYYLLR RTEVPTIIVECGFLSNPEEAAKLVTEEYQDKLADAITQGIQSCLSQ >gi|224461045|gb|GG657759.1| GENE 2148 2241125 - 2243119 2070 664 aa, chain - ## HITS:1 COG:CAC1556 KEGG:ns NR:ns ## COG: CAC1556 COG3858 # Protein_GI_number: 15894834 # Func_class: R General function prediction only # Function: Predicted glycosyl hydrolase # Organism: Clostridium acetobutylicum # 346 664 157 445 446 117 26.0 5e-26 MDERQRRSRTASDRSGNTERPDRQRAQRSQTARGQEIRGQGSRTQGTRSQTGRSQASRNP NRRPQTGRPANRRPSARRPQTKRRRRRNLGIRICLTVILIIAAIAAVFLWRRYSPSKEKA DLDKYYGIEQEGQLAIVVNNEVVEPKGMIADGKAYIQYEIVRDYINSRFYWDPNENILLY TLPKDMVSVEVGSKDYTVSKDKNSEDYVILKTEGSTAYIALDFVQQYTNIDYEVYDDPER VVIVGDWGEHTVAAVKKDTQVRYQGGVKSPVLSELKKGGEVTVIENEDNWKKVRTKNGFI GYVKNSALKDAEKKNVTRKFEEQEFTNISKDYTINMAWHNVTNSDANSSVLQKIAESKGL TTIAPTWFHVKDTDGNMDSIASTDYVNYAHQANIEVWATIRDFDGGINSYDESYELLSYT SKRETLINQLVAEALQSNIDGINVDFEKISDECGEHYIQFIRELSVRCRQNGLVLSVDNY VPKGFNMQYDRREQGIVADYVVIMGYDEHYAGSPEAGSVASYDFVKEGIEETLKEVPADK VISGIPFFTRLWEETPKTEEELASQKGTEEGEYAMKVESKAYGMTEAKDVVAQAGAEITW DDAAKQNYAKWESGGVTYEIWLEDEKSLEAKLDLMKQNKLAGTAAWALGLEDPNVWQLIL KYVN >gi|224461045|gb|GG657759.1| GENE 2149 2243174 - 2243437 226 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570092|ref|ZP_03779117.1| ## NR: gi|225570092|ref|ZP_03779117.1| hypothetical protein CLOHYLEM_06188 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06188 [Clostridium hylemonae DSM 15053] # 1 87 1 87 87 154 100.0 1e-36 MKNEIYKFLYNELTDYEKEGVSLSMEGSPASPTQIVEAHMMREDVSYMRDYVLDEDGDIK EVCFHHVKLQEKTAAVDTPQNNNKMSK >gi|224461045|gb|GG657759.1| GENE 2150 2243908 - 2244636 475 242 aa, chain + ## HITS:1 COG:no KEGG:Closa_0328 NR:ns ## KEGG: Closa_0328 # Name: not_defined # Def: Negative regulator of genetic competence # Organism: C.saccharolyticum # Pathway: not_defined # 1 240 1 237 239 221 50.0 3e-56 MKIEKLNDNQIRCTLTRADLAARQLQLSELAYGTEKAKSLFHDMMQQAAFEFGFEAEDIP LMIEAIPASSDSIVLIITKVEDPEELDTRFSKFSPSPGGDWDSKKNEAPDKLDGAETLLD LLGKVKEKIGTQEETSGEDTKEVQKTSLRLFSFATMDSVIQAARLLSGMYNGSNTLYKDH GEDVYILALTQSDHTTNDFNRICNMLSEYGSLEKASGATLAFLEEHCEILISADAVQKLA VI >gi|224461045|gb|GG657759.1| GENE 2151 2244696 - 2244896 274 66 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01948 NR:ns ## KEGG: EUBELI_01948 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 66 1 66 68 78 59.0 7e-14 MAKVSKDMTIGEILSINPDVAPILMEIGMHCLGCPSAQGESLAEAAMVHGIDADLLEEKI NAFLNA >gi|224461045|gb|GG657759.1| GENE 2152 2245360 - 2246262 896 300 aa, chain - ## HITS:1 COG:CAC0309_2 KEGG:ns NR:ns ## COG: CAC0309_2 COG0791 # Protein_GI_number: 15893601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 184 287 51 159 171 98 44.0 1e-20 MDSILKKGLFLVTITGAIASFPVTASAADTDAAGIMPSVGIEEVLNDCYTSQNDIEVEDY LVPTRKGEYLDMAFANVQSFLYIRSEPTKESEWVGKLYPDYAAKVIGPVGEWTKIQSGSV TGYVYSEYIIIGNNAEQKAQEIVQSTEAEAPEEAFTYAESKEEEEARLAKEAEEAAAKAE EEAQAKAGTGQAVVDYACQFIGNPYVWGGTSLTNGADCSGFVQSVYAHFGVSLPRTTWDM ENVGTPVSYDQAIPGDIILYDGHVGIYMGDGQIVNAINSARGIGILPATYTNIITVRRLI >gi|224461045|gb|GG657759.1| GENE 2153 2246537 - 2246935 356 132 aa, chain + ## HITS:1 COG:SA1678 KEGG:ns NR:ns ## COG: SA1678 COG0735 # Protein_GI_number: 15927435 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Staphylococcus aureus N315 # 2 130 22 148 148 103 38.0 7e-23 MANLKYSRQRASIKEYLAGTVEHPTADTVYMHVREEFPNISLGTVYRNLNLLADIGEAVK ITTPDGGDRFDGRTEPHYHVVCGSCGKVEDLEMSSEEIASINNAADSVFDGKITSHTTLF YGTCKECLEKEK >gi|224461045|gb|GG657759.1| GENE 2154 2247044 - 2247586 342 180 aa, chain + ## HITS:1 COG:CAC3598 KEGG:ns NR:ns ## COG: CAC3598 COG1592 # Protein_GI_number: 15896832 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 179 1 180 181 213 65.0 2e-55 MKKFVCTVCGYVHEGEAAPAECPVCHAPAEKFKEQTGNREWAAEHVVGVAKGVSEDIIAD LRANFEGECSEVGMYLAMARVAHREGYPEIGLYWEKAAYEEAEHASKFAELLGEVVTDST KKNLEMRVDAENGATAGKFDLAKRAKAANLDAIHDTVHEMARDEARHGKAFEGLLKRYFG >gi|224461045|gb|GG657759.1| GENE 2155 2247687 - 2248223 692 178 aa, chain + ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 6 178 5 179 179 179 56.0 3e-45 MSKYAGTKTEKNLMEAFSGESQARNKYTYYASAARKAGFVQMSNIFLETADQEKEHAKLW FKEFHGIGDVEANLEDAVAGENFEWTDMYKRMAEEAREEGFEELAKKFEGVAEVEAAHEK RYGRLLESYKAGKTFKGDAPLGWKCNNCGYIYYGEEAPEECPVCAHPRAHFERKAENY >gi|224461045|gb|GG657759.1| GENE 2156 2248334 - 2248936 511 200 aa, chain - ## HITS:1 COG:no KEGG:CLH_1589 NR:ns ## KEGG: CLH_1589 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 196 1 196 196 282 70.0 7e-75 MKKSNVTIIKLAQTAILAALCYVAFTFLQIKIPMPGGDATSIHIGNAFCVLAALLLGGWY GGIAGAVGMGIADIMDPIYITGAPKTFVLKLCIGLITGLVAHKIARINESNNKKYVFKWS IIASVAGLGFNVVADPVAGYFYKMYILGQPQKMAEVLAKWSTATTFVNAVISTILVAGLY NAVRPIMLRSGMLVKEEERS >gi|224461045|gb|GG657759.1| GENE 2157 2249290 - 2250933 531 547 aa, chain + ## HITS:1 COG:SPy2013 KEGG:ns NR:ns ## COG: SPy2013 COG3666 # Protein_GI_number: 15675797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 7 397 8 376 401 425 51.0 1e-118 MMTKDADKKREQMQMFCMDDMVPKDHMLRLIDKAIDWRFIYELVEDRYCPDNGRPSMDPV MLIKIPFIQYLYGIKSMRQTIKEIEVNVAYRWFLGLDMLDPVPHFSTFGKNYARRFKDTD LFEQIFSKILEECMKFHLIDTSVVFVDSTHVKACANSKKMRKRVAAQQALWYEEELKKEI LQDRKKHGKKPLKDKDDKTPPTQTGGGTGEGVPEEEIPEGAKTQKCSTSDPESGWFRKGE HKHTFAYAVETACDRYGWILGYTVHPGNEHDSRTFKALYDRLTKWMRPERVVMDAGYRTP AIAHRLLADGIEPLFPYKRPATKKGFFKKYDYVYDEYYDCYLCPEDEVLSYRTTNREGYR EYKSDPQICGSCPSLSQCTESKTHEKMVTRHIWEEELDRCEDIRYTIGNREIYGKRKETI ERVFGTAKEQHGFRYTQSVGKAQMELKTGLTFACMNLKKLAKILANREEKGAPTQSVLLL WVHKIETTLRNKRWCWSKASTPSLSTVWAKRDGDGGFLKNLRPHLFLLYIFCHSGLLFFH IGYNILI >gi|224461045|gb|GG657759.1| GENE 2158 2250990 - 2251652 484 220 aa, chain + ## HITS:1 COG:CAC0882 KEGG:ns NR:ns ## COG: CAC0882 COG1272 # Protein_GI_number: 15894169 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Clostridium acetobutylicum # 7 220 3 214 214 172 46.0 4e-43 MAEIIKTHIKDPGSAITHFIGMLMAIFAAVPLLIKAAHEPSRIYMISITVYAISLILLYA ASTTYHTFNKSEKVNTILKKIDHMMISILIAGSYTPICLLVLKGKLGIILLSVVWGIAIV GILIKAFWVYCPKWISSVLYIGMGWTCVLAFTQILNSLSPAAFGWLLAGGIIYTIGGVIY ALKLPIFNTRHKYFGSHEIFHLFVMGGSICHFILMYVFIL >gi|224461045|gb|GG657759.1| GENE 2159 2251731 - 2252051 210 106 aa, chain - ## HITS:1 COG:BH0048 KEGG:ns NR:ns ## COG: BH0048 COG2827 # Protein_GI_number: 15612611 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Bacillus halodurans # 26 105 3 82 94 83 56.0 1e-16 MSPAVAKYKDKAYNKRHQLKGFCFMNYTYILKCKDGTLYTGWTNDLDKRVKAHNSGKGSK YTRVRRPVELVYYEEFRTKEEAMSREYAIKHMRREEKEVLVKEAGK >gi|224461045|gb|GG657759.1| GENE 2160 2252138 - 2252896 806 252 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0243 NR:ns ## KEGG: EUBREC_0243 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 56 252 27 224 225 148 43.0 2e-34 MNKRQRPARKRKGATAAVVVCFVAAIAIVGTYTFRDYRKTQQEQQLAQAEETNETKEEKT EEPTETANNDLVINTTENDDKQNTDENSGDTADGAAANENQNTQATAGSGTSVHFTEDSQ LLWPVNGNILMNYSMDKTVYFSTLDQYKYNPALVISGAEGDQVISAAPGIIKSIDVSAET GTTVNVDIGNGYELFYGQLKEVPVKVGDYVEAKSVLGYISQPTKYYSVEGSNVYFEMRKD GQPVNPMEYLAE >gi|224461045|gb|GG657759.1| GENE 2161 2252943 - 2253833 791 296 aa, chain - ## HITS:1 COG:BH3748 KEGG:ns NR:ns ## COG: BH3748 COG2385 # Protein_GI_number: 15616310 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Bacillus halodurans # 14 289 14 325 336 133 30.0 4e-31 MRQRLKQWGCYLIIIILLPYVVTVFLNGPSITATSHVDSTYVKVKTASKEEVKMPIEEYC IGVLAREIPASYKTEALKAQAILVRTDVYKKIRESGSDTVLADDFWTTKQMEDAWGISKY SKYYDRLKKAWNETEGQVLMYGENLAVTPFFRISNGSTRDGKEALGSGDYPYLKIVDCPL DIEAEEQIQTVTIDDMDAEVTAYDTAGYVTSVRVGQENISGEEFRTTYGLASGCFTLQKY NGKLRITTRGVGHGLGMSQYTANEMAKKGKDYKEILQKFFEGTEIKEVAEILIDTE >gi|224461045|gb|GG657759.1| GENE 2162 2253875 - 2254471 657 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570107|ref|ZP_03779132.1| ## NR: gi|225570107|ref|ZP_03779132.1| hypothetical protein CLOHYLEM_06203 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06203 [Clostridium hylemonae DSM 15053] # 1 198 3 200 200 312 100.0 9e-84 MYESNGLAVILLIYLLVLGVIGIAALAAYILQGVGMYTLGKNRGMKYPWLAFIPYARVYY QGELCGPLAFKDRRMDNPGIWLLVIPIASGVITGIFTAIVWGGVLVNIVRMADQAINSYY PFYNMFSGFGSGIMLLALLGLGLFTLAASAVQKTLTVLVNRQIYKRYTDGNYAVMHAVLG IFVPLYTAVYFFIIRNRE >gi|224461045|gb|GG657759.1| GENE 2163 2254474 - 2256963 2554 829 aa, chain - ## HITS:1 COG:BH1084 KEGG:ns NR:ns ## COG: BH1084 COG0058 # Protein_GI_number: 15613647 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Bacillus halodurans # 18 827 6 808 815 807 49.0 0 MFRRSKGENMYNPIFEKEKFKREVTNNVKTLFRKTVDEATPQQLFQAVSYAVKEVIIDDW IATQKAYKEQDPKIVYYMSMEFLMGRALGNNLINMTAYKEVAEALDEMGIDLNAVENEEP DAALGNGGLGRLAACFLDSLATLGYAAYGCGIRYRYGMFKQKIEDGYQVETPDNWLKNGN PFELRRPEYAKEVRFGGNIRVEYDEEGKTHFVQEHYESVRAVPYDMPIVGYNNHMVNTLR IWDAEPIVDFQLDEFDRGDYHKAVEQENLAKNIVEVLYPNDNHYAGKELRLKQQYFFISA SIQQALSKYKMTHDDIHKLPEKVTFQMNDTHPTVAVAELMRILLDEEGLGWNEAWEITTH TCAYTNHTIMAEALEKWPIDLFSRLLPRVYQIIQEIDRRFVEQIRSQYPGDEGKVKRMAI LMDGQVKMAHLAIVAGYSVNGVAALHTEILKKQELRDFYEMMPSKFNNKTNGITQRRFLL HGNPLLADWVTEKLGTKDWATDLSLMSGLRKWADDEEALKEFMSIKYKNKERLAQYILEH NGIEIDPRSIFDVQVKRLHEYKRQLLNILHVMYLYNQIKEHPERSFYPRTFIFGAKASAG YIRAKQIIKLINSVADVVNNDRSINGKLKVVFIEDYRVSNAELLFAGADVSEQISTASKE ASGTGNMKFMLNGAPTLGTMDGANVEIVQEVGIENAFIFGLSSDEVISFEQHGGYNPVDI YNSDHEIRRVVDQLVDGTYGYGNREMYRDLYNSLLNTKSSSRADMYFILKDFRAYAEAQE KVEAAYRDRDRWAKMALLNTASCGKFSSDRTIEEYVKDIWHLDKLTVEV >gi|224461045|gb|GG657759.1| GENE 2164 2256947 - 2260096 3387 1049 aa, chain - ## HITS:1 COG:CAC3038 KEGG:ns NR:ns ## COG: CAC3038 COG0060 # Protein_GI_number: 15896289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 1048 1 1033 1035 1221 56.0 0 MYKKVSTDLNFVEREKATEKFWEENNIFEKSMKEKDGNDIYMFYDGPPTANGKPHIGHVL TRVIKDMIPRYRTMKGYEVPRKAGWDTHGLPVELEVEKLLGLDGKEQIEEYGLEPFIDKC KESVWKYKGMWEDFSNTVGFWADMDNPYVTYHNDYIESEWWALKQIWDKGLLYKGFKIVP YCPRCGTPLSAQEVAQGYKDVKERSAIVRFKVKDEDAYILAWTTTPWTLPSNIGLCVNPA EDYVKVKAADGYVYYMAEALLDKVLGRLAEEGESAYEVLERYKGEDLEYKEYEPLFSCAA ECAKKQKKKAFFVTCDSYVTLTDGTGVVHIAPAFGEDDAKVGRKYDMPFVQLVDEKGNMG ESTPYAGVFVKKADPLVLKDLEEQGLLFEAPKFEHSYPHCWRCDTPLIYYARESWFINMT AVKDDLIANNNTINWIPESIGKGRFGDWLENVQDWGISRNRYWGTPLNIWECECGHQHSV GSIEELKSMSDNCPDDIELHRPYIDEVTVKCPECGKEMHRVPEVIDCWFDSGAMPFAQHH YPFENKELFEKQFPADFISEAVDQTRGWFYSLLAISTLIFNKAPYKNVIVLGHVQDENGQ KMSKSKGNAVDPFDALEKYGADAIRWYFYVNSAPWLPNRFHGKAVTEGQRKFMGTLWNTY AFFVLYANIDEFDATKYALEYDKLSVMDKWLLSKMNTLVKEVDNDLENYRIPEAARALQD FVDDMSNWYVRRSRERFWAKGMEQDKINAYMTLYTALVTVCKAAAPMIPFMAEDIYQNLV RSIDKDAPESIHLCDFPLVDESCIDTELESNMEKVLKLVVMGRACRNTANIKNRQPIGQM YVKADFELPVFYQDIVTDELNVKTMTFTQEVRDFTSYSFKPQLKTVGPKYGKLLGGIKAA LESLDGNAAMDELNASDALKLDINGQEVTLFREDLLIETAQTEGYVSENDNGITVVLDTN LSDELLEEGFVREIISKIQTMRKEADFEVMDKIEVTYEGTEKAEKVFAENAKIIAEETLT VKMTKTTPAGFVKDWKINGEEVTLGVQKK >gi|224461045|gb|GG657759.1| GENE 2165 2260549 - 2262321 514 590 aa, chain - ## HITS:1 COG:no KEGG:SOR_0328 NR:ns ## KEGG: SOR_0328 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: S.oralis # Pathway: not_defined # 409 577 1700 1871 2064 161 44.0 1e-37 MIDIEELRDTRPFIIYSDRDISGTVGGNPSVESYCSLDYTSASRYRLNRDDHNQIFQFFG NLLGSTNKPVYCLDKFADGPYNDVPYESRPFETLFPAATERQKEMLGWILANTYPAVSAA ATFALAGVDPDASPALDDNDAYAVVQTALWVLLGQIAPDEVYFLDCADDNEHPKSDRMRA AVLALLKLAGDYVDAEPDVPVPSPTPNDQCCTGDCGIKCCNKSVLPTDTTAPYFIFKGCP DEVRTVCGRMLIGPFRILSSFDGRPDITVTPFCSCREDYSVTFMDFCGNPISDPVIGQEF YIALRTCGKYACFTVKASFTGTITRVITMEAQSTALNYQPIGTSFDDVQIGQEAELCVCA EYPSVDCSVSKGQGGYAGININNNNNNNNNNNTNNSCGAGGFPVPFPCMMPCYPGWGRPP ELPYPPYPPYPPYPPEPPYPPRPPYPPEPPYPPRPPYPPEPPWPPRPPYPPEPPWPPYPP EPPCRPEPPCKPEPPCRPEPPCKPEPPCRPEPPCKPEPPCRPEPPCRPEPPCKPEPPYRP EPPCKPEPPCRPEPPCKPEPPCKPEPPCRPEPPCKPEHCCPICSIKSPLL >gi|224461045|gb|GG657759.1| GENE 2166 2262503 - 2263867 1423 454 aa, chain - ## HITS:1 COG:CAC1267 KEGG:ns NR:ns ## COG: CAC1267 COG1686 # Protein_GI_number: 15894549 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 55 323 18 290 425 174 36.0 4e-43 MKRSRWSLIILMTLAVAFTSTINIAYAAEPETENAAAEEETPEQKAEREAYEMPVQTNEL KKWPKGPATYGEAGIVMEVGTGAILYAKNIDEHEFPASITKVLTALVALENGQLTDEVTF THDSVAFLQPGDSSIGMKEGDVISLDEALHATLLASANEAAYAVGESVGRNAGHDYNWFL EQMNARCKELGGENSHFANTNGLHDENHYTCARDMALIGRELFKHPEFFDIVQTLNYAIP ATDTCEEHIFQQKHKMLIPGNSNYYEYAVGGKTGYTSDALSTLITMAEKDGVRLVCVVLR THGSNIYSDTKNLLDYGFSNFKKTAASGEEDSKDVDSIIDSDGDGYVMLPEGIKFKDLDM KLKADENARGEAVLTYSYKGYTVGSARAKLSKSYIKDHSAKIRTSKKEENKEKSSGKKLT FAIVVAAAGILLLVFYIRRMIKKQRRRRRKRRRR >gi|224461045|gb|GG657759.1| GENE 2167 2263886 - 2264452 633 188 aa, chain - ## HITS:1 COG:BS_sipS KEGG:ns NR:ns ## COG: BS_sipS COG0681 # Protein_GI_number: 16079388 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 35 167 10 155 184 85 36.0 6e-17 MDADEIKQVKQKVLEDVDPPTKKKKKHMRRMSWLRTILEFAAIIVVICGLFQIVMGISYV EGQSMYPTLHDKDMVVYKRRQKAYAPGDIIAIDRPNDEEFVKRVVAVAGDTVNIEGGRLY VNGKEREEPWALGETKAVKNGIVFPITVTDGEVFVLGDNRENSEDSRMFGPVSISDTKGR LVWYIGKL >gi|224461045|gb|GG657759.1| GENE 2168 2264582 - 2264773 292 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570113|ref|ZP_03779138.1| ## NR: gi|225570113|ref|ZP_03779138.1| hypothetical protein CLOHYLEM_06209 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06209 [Clostridium hylemonae DSM 15053] # 1 63 1 63 63 116 100.0 5e-25 MLEYMFSHSVLGLCAWDLPALIVLIVMIVVFGVHRHKQKKREKDFEDQLADKLAQETVDT VQS >gi|224461045|gb|GG657759.1| GENE 2169 2264795 - 2266600 1889 601 aa, chain - ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 125 304 391 590 656 67 30.0 9e-11 MTEAPKKYEGYTYDAEAGEDPLASGTIAGDGSLTLKLYYTRNSYNVTYKVDGAAYAGPQS YKYGEQVSIEPDAVKEGYTFSGWSQKEAFEMPANDVEITGTFTANGDTKFIVKHYLEGLD GKYTEGKSEDKTGETDTIATANPTTFTGFTYDKNSEKNVTTGTITGDGKLVLKLYYTRDE HTVTYMVDGQQYGKTDTYKYGADIAGLRKEPTKEGYTFSGWDRTLPDKMGTEDIVVNGSF TINTYKVTYLVDDVQYGAVDSYVYNSDVTLRNAPDKEGYTFSGWQHPDNFKMPAKDVVIK GTFSVNNYKYTVNYYYDNNLADDETVSENAPFSSTVSAKTPGTKERDGQNYMLDDIGLPY ETTISTNEDANVINVYYVLDNNGPEGKPDGIPDSEEYAVTYNANAQNATGETVDNSIYPV DYQVVLKANGFVNEGYVFDGWSSGTDNQNLYQPNGWIKMAKGGLVMNAQWSAAPVTPAGT NPGGTTPGGNDTAAPANAGTITPAAVIQTITEPVAAFVQNVGNAVGANVQQLVQSDDEGV PLANRASKDHKCCILHFLLLLLALLVEIGYTRSMKKRQERIFELREEIAMADKEIEKDEA A >gi|224461045|gb|GG657759.1| GENE 2170 2266780 - 2268663 970 627 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42080 NR:ns ## KEGG: BBR47_42080 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 419 624 515 739 747 80 27.0 3e-13 MAPAEPQEPASFPKHQKFYVNDVCFETEEAVQELQGRLLGVYVKEQDKYRELRELKEGVP LNARPFGSRPEAGDAVYFLFQNLPVSGDTKLRLYIQVKKSVRRNPFSEEEPVEFARMQWS CLGSSGFEDILFQDDTHGFLQSGEIGLCLDTVQPVKTRVGAKEGYMLCCRIAEADYDRAP EIAAVYGPLFPLIQRDTWSFSAQFDGGGDIRLYPVFPEEMFLMVYVREPGSAHYVIYGEA PGREEEICGAKDRAGGAGNAAHGRYYVRTKGQGGEIHIRFQEEVFGYGPAKEPGAVTVVC CNRHMMLHRELGILAGYDDQYVDCPPGGEADEKAVCLGVRRRDGASGEAYRFFPPGIQRE DSIYYIYDEDRRQICIRDAGPYRGCEAFLSDYAVSVWEAGNIRFGNMLVSVGGNDNICVK NPVKGTEGRRKESLHDVRKRFLKDMKTPVTAVTEEDYELLAMQVPGLCIRKARAYYEEQK ERICVVVMPRTEVSFPALSSLYRRHIYNYLDKRRLITDKVTVKEPAYTPVSVYVTVSVRD RESWNVKRVRQEIAEELDDRRNRRKIGQNISFDRLSSRIRSCPGAGHILELKVVPAGVPG RLIRSGADIPIPPDAACYPGEIIIREE >gi|224461045|gb|GG657759.1| GENE 2171 2268670 - 2269620 711 316 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42070 NR:ns ## KEGG: BBR47_42070 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 22 262 346 594 699 76 25.0 1e-12 MKRYSIDGRFTADAGREAKRIFLPVTDSMEKNTVWGRLHVKMQLPAKGLCHVYVMAGNEK DDIERLLNDRAEPEEKKAELFDAYGRKAGTNSENMLLYEVQGRFLWIYIEILCSGSGAVY DIFLENPGDEFMQMFPEVYREPGGFFQRYLSVLSTLYRDMQRKIDGSAGLLDEASADRDL VRLYMRWMGFDGARLGLTEKEERALLGNLYWLNRRKGTKAAILKLCAIFMEEEPMILLME DRELYLAFREAVPEKAKKLSNILRWFLPAGIRVRIICGQEPARCGGHFFLDINSSIDTLP AGALDTARQCGRSIII >gi|224461045|gb|GG657759.1| GENE 2172 2269840 - 2270406 377 188 aa, chain + ## HITS:1 COG:no KEGG:GSU0973 NR:ns ## KEGG: GSU0973 # Name: not_defined # Def: hypothetical protein # Organism: G.sulfurreducens # Pathway: not_defined # 3 175 4 189 198 74 29.0 2e-12 MTYTAIAKVSETIMNNLKEQLVPELVRFPGQIALCAPNERENASLGIFLYDIQESEYLRP QTMMNVSERQQKYPPIYITLFYMITAYSEGDVRFRSVQEERILGRVIQYFHDCPFVLPQE SQTRIELQRISTEDKLKLWSFPDEPYRLSLYYKVSPVPIESAVTKDVVRVRERKVNMERM ERQDNNGR >gi|224461045|gb|GG657759.1| GENE 2173 2270414 - 2271952 1282 512 aa, chain + ## HITS:1 COG:mlr6544 KEGG:ns NR:ns ## COG: mlr6544 COG0464 # Protein_GI_number: 13475465 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Mesorhizobium loti # 243 505 510 769 782 200 42.0 5e-51 MEDTRYVIEEKLKYILWTAETKESARPDEPAVYQEQEDQIFRLEELRTAGSPRIVTVRGK QGCGRRTLIRKVASRRRTQLVFADIEALYQCCLENGSAVFDVLSGLIGGMKAMFCLIAGR EESDEERWSELLYGLVREGISCYVLTDRDIALPREGRYEQAEIRLLPPDISQRVMLWNYF LGRSRVSGEVNAAFLAGRYTLNAGAVERVVQSAGLYRDAEGRALTAEKDIIKAVEMYQND NFSEFAVRVPSAFTWEDLIVSEETQMRLAELCGQVKYRSLVGSQWGFYDGKPYGRGVSAL FFGPSGTGKTMAAQIVAGELGLALYRVDMSQMMSKYIGETQKNISSLFDRAKEMNIVLLF DEADAFFTKRTGVKDSHDRHSNGEVAHLLQRMEEYEGISILTTNLKDNMDEAFRRRIKMM IEFQLPDEAARRKLWEKALPPKAPVEADVDLDFYARQFELSGSEIKETMLNAAFLAAPEG GKIADRHVKAAVKQCYLKYGKLMLPEELEGKL >gi|224461045|gb|GG657759.1| GENE 2174 2271968 - 2272357 419 129 aa, chain + ## HITS:1 COG:no KEGG:BBR47_42240 NR:ns ## KEGG: BBR47_42240 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 1 129 1 127 128 85 48.0 8e-16 MAQATVDGAVLTCSFGTVPCTLRVTSQQSCLACGRPAATIQDMAGKTNISGFGMCTSLAN PQVAAATAAALGVLTPQPCNCMTAAPWINPGKAPLVKKVPGLRSDAKLMCLNGMGVISIT APGQFKVNV >gi|224461045|gb|GG657759.1| GENE 2175 2272395 - 2272721 398 108 aa, chain + ## HITS:1 COG:no KEGG:PCC7424_1737 NR:ns ## KEGG: PCC7424_1737 # Name: not_defined # Def: hypothetical protein # Organism: Cyanothece_PCC7424 # Pathway: not_defined # 5 106 89 190 824 137 63.0 1e-31 MYEYEEKRKTPVNRTGIPDHVKAKFENRSGYSFDDVKVHYNSERPAQFQALAYTQGQNVY IGPGQERHLGHELGHVVQQMEGRVRPTMQVNGEAVNDDPGLEREADGW >gi|224461045|gb|GG657759.1| GENE 2176 2272751 - 2273569 395 272 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570121|ref|ZP_03779146.1| ## NR: gi|225570121|ref|ZP_03779146.1| hypothetical protein CLOHYLEM_06217 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06217 [Clostridium hylemonae DSM 15053] # 1 272 1 272 272 541 100.0 1e-152 MGGRQMKKKIDDWLASVCWTKSNLFFGPIKRTDDPAKVHPGVPQFDAHMKKGRRMSIRSA HIKSAVFDQGGFRSAVSSVPDYTAEDITDEELKTVLPGETVPAGTVRADLLGKIDTVADY VDDEWIPYPAPAGGSAEPDSVAKILAGGDYLRREECTFTFAIKDNSNAVITRRGKYDGDR LYIEVTAASIMDSVAVQYRQSNFAGKNPEDKVVAFLLVGDAPVNDDDASSWRAEIPMPAD CTVGNAVLIFRKLAGNEIRKEFKNLFFKREAQ >gi|224461045|gb|GG657759.1| GENE 2177 2273660 - 2274979 1166 439 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570122|ref|ZP_03779147.1| ## NR: gi|225570122|ref|ZP_03779147.1| hypothetical protein CLOHYLEM_06218 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06218 [Clostridium hylemonae DSM 15053] # 1 439 23 461 461 832 100.0 0 MSNRLTGWLKHGPDLRDAYFIFADDVFTGHMTYGQFTTLLKFYLLIYRRILIADSFLVNN AHLHRFLLEEGRELLEKGLIVFVLRSDKSKVSDLLNDFKKSKTLNDGLETDKVKRILDHY DFRKTIKWDKERISQNFNDKICASLNMLPISGEDAQKFAEELDAKKAKGLLTRQFVYDYL DKQYVPSDPVRQVIKKYTDIIYSFNIPNALHVASAYPERLLSNELLSPEKVFFQLTDEKD IEARLLHEISYQSEDLISEDTISCDHPLMFYTAVLSRLGAGEILALREIDSFAKYLDALR RNDSEEMKWYFYNYCQESNKLAAAMISKDYHDLKKKGHKLSIRSKVENTAKGIISFGLNF VPSPHELLTPLADTFITGGISLISQKASHALEKEYNIGLINASREAQKLADQDKHTILNE TEDVFQINKIRENRNERSV >gi|224461045|gb|GG657759.1| GENE 2178 2274963 - 2275463 540 166 aa, chain + ## HITS:1 COG:VCA0764 KEGG:ns NR:ns ## COG: VCA0764 COG0494 # Protein_GI_number: 15601519 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Vibrio cholerae # 26 156 49 179 185 94 37.0 1e-19 MKEVYNNGFYQVFDEKGRIRIESVNGGTVVVPVTAEGKYIVLKIYRPNLQKIMLEFPRGF LEPGEEPEAGARRELMEEIAGTGDEFISLGTATLDSGISGTANHFFLCRNASCDVTRLQE EEGIKELLFLGEEEMKAYIRGGEIMDSFTIVGFAKALVFTEDQLQY >gi|224461045|gb|GG657759.1| GENE 2179 2275636 - 2276796 857 386 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2506 NR:ns ## KEGG: Cphy_2506 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 248 1 248 249 93 29.0 2e-17 MALIKCPECGREVSDMSGRCPGCGYPIQEEGTKESSGTEQKTNGSDEKKGKRGSKTKKII AALIGASVVIAIIAGIGISSKNAKIREQQKAEQKEIITYNEYVDKLNSLYSQAFNGASNA EAICVLTGKVWTNSIYGKSDEETDKYTAGAIDFNAAIQNIYNDEEIKKKLDNVRDIQEKC SNYIQALQSCPDELGKCYDAAVQLNTAYTAFAELALSPSGNLTSYRDSESKKAEELLNAY NTLGAMIPAKKEVPLYDDKGDKIKDEFAFEIYLNQKPDKLPDTVDDTMAKIGLNSYKDSA VVCGEEGTINYTILSGTVCNICWTVETPGDTTPDKLLEKLRERYGKENTKKDNTYLWNND KNKDSVTLKVESDKVSISWLNIKDQL >gi|224461045|gb|GG657759.1| GENE 2180 2276960 - 2277928 595 322 aa, chain + ## HITS:1 COG:no KEGG:BC0954 NR:ns ## KEGG: BC0954 # Name: not_defined # Def: TcdA-E operon negative regulator # Organism: B.cereus # Pathway: not_defined # 219 321 144 246 248 111 51.0 3e-23 MWCTNCGYKLEENAEVCSVCGTKVRKPGEIPEGAIMQEQQAAPVQEESQVPEESQEQGES QEQGREYSEEMERRQQGGGEKNAKDWRGILKRRWAEIALALAVLMIIAYIGRDKELEGRI AEYEEEIQELLEENEGLEDRVSELSDEVYELENGAGVQLVEIRNAFDDQKWRDVIELAED LHDNYNGSEEDKEAQELAKQSQAKIDEAEAAEEAKKAQGYETGITYDQLSRTPDDFKREL VKYSGKVVQVMEGDYAISIRLAINDNSETIIYGYYQSEIVSKRILEGDHITVYGRFQGIE TYESITGKPISLPKISIDKIDQ >gi|224461045|gb|GG657759.1| GENE 2181 2278044 - 2281049 1405 1001 aa, chain + ## HITS:1 COG:SP0965_2 KEGG:ns NR:ns ## COG: SP0965_2 COG4193 # Protein_GI_number: 15900842 # Func_class: G Carbohydrate transport and metabolism # Function: Beta- N-acetylglucosaminidase # Organism: Streptococcus pneumoniae TIGR4 # 236 397 2 156 156 105 41.0 4e-22 MTKKRKLLILSLFLCLSTSLVFGTESNAEGTSGEQASAVSGMKDENAQRLKTVTGMDENG NVYEVDDSNGTFENGGNAQYFRSASNELVVNFNTKGNAVTNYTEAASGSAGYTNGAYGAD GAYLGMENGKVKFMMSGVIGLVSASDVQVVKLSDTAVVSGYYISGGRLIHGIVGDMTTPG YASKLDNGAAPSYLKSGTTYYSYDGHYFYTNYGTMITDYQNNTRSHSVNANDPYYNYFQY LPLRSKTEYSAAQLSSVINGRLTSSSSKMKNTGTQFVNQQNTYGINALVMTGIAANESGW GTSSISQSNNNLFGLNAVDSSPGTSANKYSSVDECIRQFANGWMSRGYVYPKDSRYRGGF LGNKASGLNVKYASDPFWGEKAAGVMYSLDISGGSKDSGRYTIGIKDILYKSGSNLNVRN SNSTSSTVLYNTGIHSNYAVLLKESQASGSFYKIQSDAVLNSGRTAVSAGVGEYNFDNMY AFVSSDYITVVNKGSDMAAPKKLESISISTPPSRTVYTEGDEFDVSGITVKAKWSDNTES DVTNNVTYNAGALTKDMTSVTIQYTADGVTKTATQNITVKEKITVTTVSINPLSIDLKTG MSRTFGVAVAGTGSPAQTVTWSVEGAKNTDTKIDSTGKLQVSNEETADILTIKAVSTVDT SKSATATVNVIKEIVTNPDNADTGVTDEEELETDKPEVNNPDMDVTEEGQDKDSSQNQDN GFEGSTDKIVEVKDNTSGIVVSGALPEDAKLRVDIIGKEAENYAELTKLVNTNTILGAFD ISLDRELIDGQIVQLSFTVNASYNGRDVVVLHYKESNGNTFVETYKATVKDNVVTIEVSS FSPYVIALDDAGANVADKENESDKSEGITEDELTTSQNSGSGLSGGSNNLQGSNNLQGSN NLPTVPSGAPVGSTEGTPYTAQNKNGNQTSGDNLRVDKKSVSEETNDKTAPSSGKIKISD KNSQNKVPETGDESQVVMWLLLLIFSFGFGVYNMRLSRIKK >gi|224461045|gb|GG657759.1| GENE 2182 2281488 - 2282510 389 340 aa, chain + ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 85 337 226 475 481 187 41.0 2e-47 MKYMFLLMVILLLLLLLTLVMQKKAYRRRKKRGAGKSICILTSVLHIFVGVYVLKANLAL DKIAIGEESGNYTEEHSIDVTEKVFSVYISGIDVYGEISQNSRSDVNLIATVNPKSHKVL LTTTPRDYYVTIPGVSGENRDKLTHAGIYGIDTSIATLENLYDTVIPFYIRVNFTSVEEI VDVIGGVDVESKLAFTTSKDSGLVMDVKKGENHFNGKEALAFARERQNLASGDNQRGKNQ QALLTGLIKKAMSPMILFRANSMINSVSGNTETNMSEKQIKSLIKMQLNDGKGWDVESVA AIGDDSGKQWCYSYSDGPLYVTIPDEKSVKQIKEKLRMLE >gi|224461045|gb|GG657759.1| GENE 2183 2282563 - 2283492 461 309 aa, chain + ## HITS:1 COG:no KEGG:Closa_3994 NR:ns ## KEGG: Closa_3994 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 304 1 305 310 364 61.0 3e-99 MGKATLVIMAAGIGSRFGDGIKQLESVGPNGEIIMDYSIYDALQAGFDKVVFIIRSDIEQ DFKEIIGKRIEKKVRVEYAYQEVGDIPEKYEMKFRGRTKPWGTGQAVLCCKEIVSEPFLV INADDYYGKEAYKKAYSYLTQYQNRSDILSICMIGFILKNTLSENGGVTRGICRVNSDGM LTDIVETYNIVKRSDEAWIKGGLHPIAINVESEVSMNMWGLKPEFFDILEKEFLSFLDKA EVLDMKTEYLLPTIIGNLIKDEKIKVKVLQSQDKWFGVTYKEDKEMVASEISELVNKGVY PNCLVEQNN >gi|224461045|gb|GG657759.1| GENE 2184 2283556 - 2284653 476 365 aa, chain + ## HITS:1 COG:TM0622 KEGG:ns NR:ns ## COG: TM0622 COG0438 # Protein_GI_number: 15643387 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Thermotoga maritima # 201 363 213 373 388 98 38.0 2e-20 MLLSAARSIHTVKWANAIAERNHEVYLVCNRGHEAHTDDLNTDIEQIILKYSGTVGYYFN SRELSRVVKDIQPDVVNVHYASGYGTLARKAHIKTPLLLSVWGSDVYDFPYESRLKKSIL KRNVNFATKLASTSYCMADQLRCVMDKQDLEIIVTPFGVDLTLFEPNNYSQRKSSEEIVI GNIKALEPQYGIDKLLYAIDILNKKLSKDTNWNKNLVVKIYGSGSQKSYLEELAKKKGIG DIVKFEGRISNMDVPKALSDFDIFCAMSQRESFGVAVVEAMAMEVPVVVSDVDGFREVVK NKETGIIINRDDVYAMAGALEELVRDEVKRISYGKAGRKRVQALYDWNKNVDLMEKIYNK LIKTG >gi|224461045|gb|GG657759.1| GENE 2185 2284744 - 2287392 1258 882 aa, chain + ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 33 718 1260 1989 2566 232 32.0 3e-60 MRRRVTRLVAGILVFATVVNVSFVSSAYGEEEVQSDTQNTYEADSTEINIWTGSVLNGDR AYWNSNGEKVVGQNKIGDKIYYFSEEGFVQTGWIDIGGENYYFSLENGERYEERTETIDG VEYFFDLDGRAEKVEKSSGPSNEELDANDIEKNNGIDSENKDVKEDAEDLIQSKDASVNQ GAVNSVTILKGWQDTPEGKKYYDGEGNFVVGIQNIDNKLYSFDEKGVLQTGWIESDGKKT YYGMPDGSLRTGWLHFGEIYYYCGSNGEIMRGYQKIGSSLYYFNEEGIRQTGWIESDGKK TYYGMPDGSLRTGWLHFGEIYYYCGSNGEIMRGYQKIGSSLYYFNEEGIRQTGWIESDGK RTYYGMPDGSLRTGWLRFGNIYYYCGSDGVIVTGVPKTVNGVCYYFNDEGIRSKAPGGWQ IYNGKTYYGMPDGTFRIGWLKFGNIYYYLDKDGVKLTGLNKIGGDLYFFNDEGVRQTGWI VAGGTTYYGMPDGSLRTGWLKFGNTYYYCDNDGAVIIGTPRIVNGVCYYFNDEGIRSKAP GGWQIYNGKTYYGMPDGTFRTGWLKFGNIYYYFDNNGVKVTGLNRIEGNLYYFNDEGIRQ TGWIKVAGNKSYYGMPDGVLRIGWLKFGDIYYYCNSNAEIVVGDYVVSGVLYTFDSNGIM QKKSGWGSYNGLKYYFNPSTGFPYKSQWVTFGATHYYANCNGFMVQGWQNINGKYYYFYP ATNIMARNTTIDGFVIGADGVRVPTILSKMTARAWGYSSLTGYLLMVDRDAHKVGVFKGK QGEWNNLYFWDCGNGASSTPTVAGVFKVGMKGYYFDSGSARCFWYTQFYGNYLFHSVLCY KDGRIMDGRVGMALSHGCVRLQIPNAKWIYDNIPKGTTVVVY >gi|224461045|gb|GG657759.1| GENE 2186 2287382 - 2287444 67 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFINKALKEKNPQLPRVFDK >gi|224461045|gb|GG657759.1| GENE 2187 2287590 - 2289497 688 635 aa, chain + ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 57 586 57 585 608 462 45.0 1e-129 MFCLCIVDIITIVVNAYLSLIIRHEWHYSWVPYEYISSIKIYMVVNIITTILIFMLLNLY RSVWSYASIHEVVLVGAACMLSTAFQALGMLILALKVPRSYYAIYFFLMVMTTLATRFSY RGWKALKRGFSKQKGHIVNTMVIGAGEAGSVIIHELKSSLQLKRNVACIIDDNPSKKGKY LQGVRIVGDRNSIISMAEKYQVEEIILAIPSANAKTTKDILKICNQTQCKLKVLPGMYQL ITEEVSVSKLREVSIEDLLGRDSINIDLDSVAGYVSDRTVLVTGGGGSIGSELCRQIVNY NPKCLIIFDIYENNAYDIQQELKKKYPKLHLEVLIGSVRNTKRIEWVMEHYRPNVVYHAA AHKHVPLMEDSPNEAIKNNVFGTYKTARAADKFGVEKFVLISTDKAVNPTNIMGASKRLC EMIIQTYNRYSKTEYVAVRFGNVLGSNGSVIPLFRKQMEAGGPVTVTHPDIIRYFMTIPE AVSLVLQAGAYDNGGEIFVLDMGEPVKIADLAKNLIRLSGYTLGVDMEIEYTGLRPGEKL YEELLISDEGLQKTKNDLIYIDEPIEFDEIHFLSELGNLEKAAVNESENVKEIVASIVST YHIRPEDKKRDEENYKALNSLGKFSHEGPIVEEYL >gi|224461045|gb|GG657759.1| GENE 2188 2289494 - 2290693 326 399 aa, chain + ## HITS:1 COG:SP1837 KEGG:ns NR:ns ## COG: SP1837 COG0399 # Protein_GI_number: 15901666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 1 396 1 396 408 504 59.0 1e-143 MKNMQIPFSPPDITEEEIAEVVDTLRSGWITTGPKTKEFEREIAKFCHASRAVCLNSATA CSEMTLRLLGIGPGDEVITSAYTYTASASVIAHVGAKIVLVDTQKDSYEMDYTQLEKAIT EKTKAIIPVDLGGVMCDYDKIFDIVEKKRSLFYASNEIQEKIGHVAVVADAAHALGAGRN GKLCGEIADFTCFSFHAVKNLTTAEGGAVVWKDIQGIDNEELYKKYMLLSLHGQSKDALA KTKQGAWEYDVLDTYFKCNMTDIMAAIGLVQLRRYSSLMKRRKEIIQIYEKGLENLPVNT LKHYGENYSSSGHLYLVRLKGRNRQECNEIIIKMAEDGVATNVHYKPLPLLSAYKNRGFD VLDYPNSYALYENEITFPLHTKLTNEEAEYVIATFRKYV >gi|224461045|gb|GG657759.1| GENE 2189 2290711 - 2291391 -203 226 aa, chain + ## HITS:1 COG:SP1838 KEGG:ns NR:ns ## COG: SP1838 COG2148 # Protein_GI_number: 15901667 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Streptococcus pneumoniae TIGR4 # 1 226 1 230 230 247 56.0 1e-65 MRKWENLPPFMQVDEVRVYYDILEKHRSSLLFKRIFDIIIAGVLILILSPLFLILALIIK VDSKGPAIYQQTRVTIYGREFRIFKFRSMVVEADREGTQVTTNGDTRITRVGRVIRKYRL DELPQLVNILCGDMTFVGTRPEVVKYVRKYTDKMKATLLLPAGITSLASIAYKDEEKLLK SAEDADEIYIKQILPEKMKYNLKALREFSLWGDIKIMFRTVFAVLK >gi|224461045|gb|GG657759.1| GENE 2190 2291686 - 2292660 362 324 aa, chain + ## HITS:1 COG:PA3147 KEGG:ns NR:ns ## COG: PA3147 COG0438 # Protein_GI_number: 15598343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 7 313 97 403 413 104 24.0 3e-22 MWKAMKAFKKEGPDVIYTSSPSLFIAFFSLLFGRRNKIPVVVEIRDLWPESIVEYNGMSR RNPIILMIYQLEKWIYKNATQLIFTFEGGSDYIKDKKWDRYIDLDKVNYVNNGVDLKEFA ENIGKAQIDDPDLIDKSKFKVVYVGSIRRANSVKNLVDVARTLQTQNKDDILFLIYGDGV DKNELESECKRDNLVNIKFKGKVEKKYIPYILSNSNLNILNYKQSATWKYGGSQNKQFEY LASGIPVCSNVEMGYSIMRRYQCGIEENMETVQQYAEAILAYKDMDKEEYEQQCKNARKA AEEFDYPKLSLKIEKILEHAVGNI >gi|224461045|gb|GG657759.1| GENE 2191 2292699 - 2294042 405 447 aa, chain + ## HITS:1 COG:CAC3310 KEGG:ns NR:ns ## COG: CAC3310 COG0677 # Protein_GI_number: 15896553 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Clostridium acetobutylicum # 12 447 3 437 437 547 61.0 1e-155 MILHMSYWKKMKEKLLKKIEAKEVKVGVVGLGYVGLPLAVEKAKAGFKTIGFDVQKSKVQ QVNKGENYIGDVVDKDLFDLVKKGMLKATTDFSFVADVDFIAICVPTPLDIHQQPDISYV KSSVKEIAKYLKPETIVVLESTTYPGTTEELIMPILEQDSCLKCGKDFYLGFSPERVDPG NIIYKTKNTPKVVGGVGKDATEVIAAMYRAVLEGEVYEVSSPAIAEMEKILENTYRNINI GLINELTMLCHEMNISMWEVIDAAKTKPYGFQAFYPGPGLGGHCIPLDPYYLSWKAREYG FHTSMIESSMMINDKMPKYCVERASKLLNQQRKALKASKILVVGVSYKQDIDDYRESPAL RVIEELKKEEADVSYFDPWVPEYKYHGNKYYSIKEITPSVLERYDLIMITAAHSNVDYAM IQENGKMILDTKNVMKNITKRENIETL >gi|224461045|gb|GG657759.1| GENE 2192 2294175 - 2295134 106 319 aa, chain + ## HITS:1 COG:PA3148 KEGG:ns NR:ns ## COG: PA3148 COG0381 # Protein_GI_number: 15598344 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Pseudomonas aeruginosa # 1 317 44 351 354 283 44.0 3e-76 MSEIFFDELNIPKPDINLRVGSGTHAKQTAEMLIGIENILLKEKPDYILVYGDTNSTLAG ALAASKINVPVIHVEAGLRSYNMKMPEEQNRVLTDRISSLLLCPTSTAVDNLKKEGIVSG VYNIGDVMCDAVLYYSKMLDERPKEYYFSRLTGLDKAVPLLKDWYIATVHRAENTDMVEK VGEILRAFDLLDAPVIFPVHPRTKDFVNTLRMNNFYDNIFFVEPVSYLDMLYLVKGAKKA ITDSGGLQKEAYILNTPCVTIRDQTEWIETLTGNHNILAKPKADDIVDKVMYTVIDEKKS NLYYGNGKAAEKLCEILYS >gi|224461045|gb|GG657759.1| GENE 2193 2295175 - 2296248 335 357 aa, chain + ## HITS:1 COG:TM0585 KEGG:ns NR:ns ## COG: TM0585 COG0673 # Protein_GI_number: 15643351 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 1 355 3 356 360 341 47.0 1e-93 MKCALIGCGRISTNHVKAIINNNLELIAVCDIVPEHMEKVLKEHSLQDNQNIRRYTDYKK LLKENQLDLVGIATESGLHAEIAISCIEHGTHVIIEKPMAMSIEDANRIIKISEARHIKV SACHQNRFNIAVQEMRKAVESGRFGKLSHGSVHVRWNRGVDYYRQAPWRGTWAQDGGALM NQCIHGIDLLRWMLGDDIEEVYGVTRQQFHHYLEAEDIGMAVVKFKNGAVATIEGTTNVY PHNLEETLYLFGENGTVKLGGKSTNNIDVWDFADESDLDDKNKGLKEETSNVYGNGHTSL YADMIEAIENDRKPYVDAYAGKNALELVLAIYRSQKEGKPVKFPLKDFASVDMTGEF >gi|224461045|gb|GG657759.1| GENE 2194 2297267 - 2297983 151 238 aa, chain + ## HITS:1 COG:PAB1604 KEGG:ns NR:ns ## COG: PAB1604 COG0438 # Protein_GI_number: 14521362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pyrococcus abyssi # 62 200 212 352 377 58 26.0 9e-09 MYRYDLFQYQKYLDIIYLPTLNMGKYVNGLGNVSKVDTLPPGADKRIVDDKSENYNTSDS TINIFYVGGVLGIYNFEKLLKIAKQKSYVRLKLCCRENEWNMAKHKYSDYLTERVDIVHK HGKELEQYYAWADLCSCYFEPSLYMEMAVPIKLLEYVSFQVPIIATKGTAAGNFVEKYGC GFSIPYDEGKLENVLETIHEDKRLLLNKYKQIKDCINENTWESRAQKVAGDLTSIEGR >gi|224461045|gb|GG657759.1| GENE 2195 2297990 - 2299120 421 376 aa, chain + ## HITS:1 COG:BMEI0421 KEGG:ns NR:ns ## COG: BMEI0421 COG0399 # Protein_GI_number: 17986704 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Brucella melitensis # 1 365 10 371 383 357 49.0 2e-98 MQFRDLKEQYNVLEKDINKAIQSVLSKCNFISGDEVGELEELLAEYVGIKHCVTCGNGTD AMSMMMMAWDIHEGDAVFVPDFTFFSSGEIVAHAGAVPVFYDVELETYNADINSLENAIR LVIEEGNLRPRAIIAVDLFGLPANYTDLERLAEKYNLRILEDSAQGFGGKIGVKRAGSFG DAATTSFFPAKPLGCYGDGGAIFTNDDETAKYLRSIAVHGKGKVKYDNIRIGMNSRLDTL QAAILKVKLEAFKRYELYNVNKIAEMYNERLKDIVTLPVTPEGFYSSWAQYTIQLNSSGQ REKLQQYLRKHNIPTAVYYIKPMHSQLAFSRNKEYVECKNTEKLCNTVLSLPMHPYLSEK DCDFICMNIKRCLLDS >gi|224461045|gb|GG657759.1| GENE 2196 2299195 - 2300523 197 442 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570141|ref|ZP_03779166.1| ## NR: gi|225570141|ref|ZP_03779166.1| hypothetical protein CLOHYLEM_06237 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06237 [Clostridium hylemonae DSM 15053] # 1 442 1 442 442 802 100.0 0 MMCSVLNIIWDFTKALDMRIREKFLTAFFMMISIMAYIYAILPIHVHLLLKCLIGTVFML GILVFSIDRELKPVKLNSTICLLWFGFGVIRLISGLIISIEYLPLACIWLVGFPSIFFVW NNRKDYEKLFEHIYTAFLYPTIVFFVASILLVPIRSSAYLGLTSNANAVGQRITAIFGLL IACFMFYGKGKKYVKILNLLCIWFSIAFAVYSRGRTITVVLASVIIAAFICGAVIVKLSW YELLKKAVILLIGGTVVTLIILPVNKVATSIMPEVSFQEEKEQDANLNSLIDGYMVRMEG NDKAKAGINDYSSGRMGIWIEAISKSNMLGHPSRNHIVTVRNGDVGNNTHNVFIQFMYDN GIIACVVFILLVLVALKQTVLLCYNTRKRLYAILLMIEISYLCISMFTSTNMPFLYEISF VFYFVYAILFEKSSGYTLHQAG >gi|224461045|gb|GG657759.1| GENE 2197 2300537 - 2302249 248 570 aa, chain + ## HITS:1 COG:L0095 KEGG:ns NR:ns ## COG: L0095 COG0367 # Protein_GI_number: 15674210 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Lactococcus lactis # 45 294 59 302 625 62 23.0 2e-09 MPGIYISNFNNKNNLNNVYPSKCVFEEIPISGYKVYRNTLAKFMDDKVFAQDNDFVLITE GVILNRIELMRKYRQQDFFHTVKEMLKKNGEEFFKEFRGSFCGAVYNKALDEWIVYTNQV GDKSVFYYFENGKFVIGTQVNYILNTLKKNGCPLTFDRKAMYDMLTFAFMEQDSTYAHEI KRLGAGQYIKISKGQLHIYKYFEFLRDDGHLRDLQEEELIDIIDSKFRQAIQREYEKDLE YGYRIYTDLSGGLDSRMTMWVGAEMGYLPMTHLTYCQANYKDELIAKDLADYWGNEIVVK SLNDARFMYDIERIVEMNNGLSLYSGITGGMRLLEMIDSEFMGLEHTGQLGDAVLGSFYK KAEQIGNWELTGMYSEKLKDRISDEYKHTFCDNEMYLLYTRGFQGAMCTHSIRQNYTEVS SPFIDVDFLSFCYNIPAELRVKHNIYIKWILSKYPEAAGFEWEKSGCKLSAGNAEQFIRK VITAGPRKLRKALRITDKISNKGMNPMDYWYKSKCELSRFMDGYFEENICNKVFDKKEKE CLESYYKNGTTMEKTQALTVLGAVNYYFGS >gi|224461045|gb|GG657759.1| GENE 2198 2302617 - 2303426 123 269 aa, chain + ## HITS:1 COG:NMA1057 KEGG:ns NR:ns ## COG: NMA1057 COG0438 # Protein_GI_number: 15794006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 75 255 6 191 230 90 29.0 3e-18 MIGGYIGVCLSEKYGCQCVITEHSSKILRGVLNDIEKKVLRECVDKSNHFVCVSNNLKRY VEKMVDFRGKICVQPNMVSPIFKSSYKTFSPFLFTSVGNLIPGKKMDLLIEGFCECFSEK DDVILKVIGGGQERQRLEGIIKSRNRENQIILTGPLPRNKVAEILAQSNVMALVSEIETF GIAYIEALASGNVIIGAHNGGADDIITEDNGVFISEFDIASVSTALRYVHDNYNNYDCIH IRKSCIQEYGEEAFVNAYRKFWRCESNEQ >gi|224461045|gb|GG657759.1| GENE 2199 2303546 - 2303659 133 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDHKMAPWKYAVKLTMNVFAFLHKRTREYLLHEIEGF >gi|224461045|gb|GG657759.1| GENE 2200 2303911 - 2304474 252 187 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570144|ref|ZP_03779169.1| ## NR: gi|225570144|ref|ZP_03779169.1| hypothetical protein CLOHYLEM_06240 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06240 [Clostridium hylemonae DSM 15053] # 1 187 166 352 352 335 100.0 7e-91 MQGSAVQYLYKRTKLIDSDIFFEPKLVYSEDLCFCLEIYTNFDSIKVTSYYAYIINAVNN SSSRRYREEFWNELLNVYEKINTITQSEYESIYYYYGRGAINHYLQYLPVQEVIDKSKKI IYDEKFKTSIKNISFANKTWSEKLEDWFYIKNHYALVIYYKKIDMVLHRIGAGIKRKIRF IILNGKI >gi|224461045|gb|GG657759.1| GENE 2201 2305621 - 2306049 149 142 aa, chain + ## HITS:1 COG:no KEGG:Rumal_3609 NR:ns ## KEGG: Rumal_3609 # Name: not_defined # Def: polysaccharide biosynthesis protein # Organism: R.albus # Pathway: not_defined # 1 138 372 509 509 94 33.0 2e-18 MWHEDRFRPMVVSFINLCLNLILVQFIGVYGVLIASCLAKGLFGLPWVLYNLFHVVFHRS PWNYIKRLLYYVFTSVIVSAVVFAICTLVTCGGIAELAVKLTICCLIGNSFFWILLRRDS QFKAAIGLLQRFVPEKLKRLIH >gi|224461045|gb|GG657759.1| GENE 2202 2306046 - 2306177 59 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGILLTSHPFKNNIKANINIPVLIKQFTLTFLLIVSLHSMIYV >gi|224461045|gb|GG657759.1| GENE 2203 2306803 - 2307537 163 244 aa, chain + ## HITS:1 COG:no KEGG:SPAP_1394 NR:ns ## KEGG: SPAP_1394 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 3 235 201 433 435 124 31.0 3e-27 MTYYILRDYFEGSSVWLGKIEKRLLCISAPAILILMKIFTNIRGHVQIEFSNVFQMIKDF FDGQGVTFEVLTKCYGWIGNLPSRNLRNYTFGEFIDYIQYGSIGQKIFGTSPLPDYNCEA NGLLSNKLSHNLAYAMDKDSYLAGRGWGSSFILENYIDFGYIGVIIFSVLLGMVLIAFVK KFNTNIILNVIILVSITSIYFMPRAEATGWLLFIITFRFWACIIMCYFLTWVYRKYISGA FIRK >gi|224461045|gb|GG657759.1| GENE 2204 2307567 - 2310683 1228 1038 aa, chain + ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 175 840 569 1187 2566 159 28.0 2e-38 MKSKKILSLLLVAVFSCQTATVYADEGDGYQADEISEEQIYEKELPKFSIEDMNLIIGEQ RYFYALPDDLNLQENELKVTVEDEAVVKIQIAAPESLEADIKDGVPENAQWYCAIGISQG ETMICIQMGNKEKKIPVIVSGQEGDSEEKNEKNTEEGQIDGEAITKDKIAENTYNTFSVQ TGWTEREGKKYYINGNGEACKGITKIEGVLYYFDENTGALTESAGWIDINGSRYFCNEEG KLYNRQFIKFGNIYYYMGADGSLQKGIFQADGKKYYADPATGQVNLKAGWIEDSGKRYFA NEEGILYINQFIKFGSIYHYLGDDGSEQKGTFEVQGKKYHANSATGEIKLEAGWIEDDGK RYYADEEGVLYANQFIRFGNIYYYMGDDGSVQKGTFGANGKKYHANSDTGQIKLEAGWIE DNGKKYYSYGGGEIFYSQFISFGAISYYMGADGSIQKGVIQTGDKVYYADESTGQIQKKV GWIDSGGKRYFSNEAGILYSSQFISFGAVTYYMGADGSLQKGIIQAGDKVYYADESTGQI QRKVGWIDSGGKRYFSNEAGILYSSQFISFGAVTYYMGADGSLQKGIIQAGDKVYYADES TGQIQKKVGWIDSGGKRYFSNEAGILYSSQFISFGAVTYYMGADGSLQKGIIQAGDKVYY SDESTGQIQKKVGWIDSGGKRYFSNEAGILYSSQFISFGAVTYYMGNDGSLQKGIIQTGG KLYYADESTGQIQKKAGWIESGGKKYYSNEAGVLYSSQFISFGSNCYYMGADGSMQKGKQ YINGKWYYFDEETGLMIRSTGWFSSGPNRYYQKSDGTLAIGYTDIDNIRYYFNSSGVLAS KMGIDVSQWQGNIDWRKVKEAGVEFAFIRVGYRGSASGNLAADPYYKQNIEGALAAGIKV GVYFFSQATTVQEAREEASYTYNLIKNYNITYPVAFDTEYYDSAHSGRADKLSASTRTLL ANIFCSEIRNYGYTAMIYSGTYFMNNNLQMSLLTNCLVWVAQYNKELQYKGTYKCWQYSS SGRVNGINGNVDMNVWIN >gi|224461045|gb|GG657759.1| GENE 2205 2312245 - 2312910 162 221 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570148|ref|ZP_03779173.1| ## NR: gi|225570148|ref|ZP_03779173.1| hypothetical protein CLOHYLEM_06244 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06244 [Clostridium hylemonae DSM 15053] # 1 221 463 683 683 428 100.0 1e-118 MGKEQKIISQLYFVLPVMGMGIFSYYQGRSHNEVFSWIVWPAVIIIALFTQDKLLYYKEK GKLSGSNNAKLYIGLIGLLFLSFDTIGILVFPKVLSPLKSSKIEETYIDVSAEFIQKFWP EQKVDLILSDNVQVAVQLGMPLDTPFTEYIDWYTKEDYNEIIDYLKQTRNLVAFDNVTLS ALRLYKSEEMKEIESDYLHLEEIEDAGGTEIFYMYRPNIER >gi|224461045|gb|GG657759.1| GENE 2206 2312922 - 2313698 411 258 aa, chain + ## HITS:1 COG:alr2825 KEGG:ns NR:ns ## COG: alr2825 COG1208 # Protein_GI_number: 17230317 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Nostoc sp. PCC 7120 # 1 257 1 257 257 316 58.0 3e-86 MKVVILAGGFGTRISEESHLKPKPMLEIGEKPILWHIMKEYSYYGYNEFIICCGYMQHVI KEWFADYYLYNSDVTFDFTDNNRMTIHNNVAEPWKVTLVDTGYSTMTGGRIKRIHKYVGN EPFMLTYGDGVSDININELVKFHESHGKIATLTAASVGQRFGVLDISKDKVITSFREKSM DDGARINAGYMVLQPEIFSYIEGDTTVFEKEPLKTVAEKGELKAFIFDGYWQCMDTKREM DNLNELWASGKAPWKIWD >gi|224461045|gb|GG657759.1| GENE 2207 2314952 - 2315062 117 36 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570150|ref|ZP_03779175.1| ## NR: gi|225570150|ref|ZP_03779175.1| hypothetical protein CLOHYLEM_06246 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06246 [Clostridium hylemonae DSM 15053] # 1 36 422 457 457 83 100.0 6e-15 MVMNQTFWIGVYPGMSDEMIDYMIDMICQAVKNARG >gi|224461045|gb|GG657759.1| GENE 2208 2315164 - 2316801 223 545 aa, chain + ## HITS:1 COG:TM0548 KEGG:ns NR:ns ## COG: TM0548 COG0028 # Protein_GI_number: 15643314 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Thermotoga maritima # 2 516 37 551 584 313 36.0 5e-85 MDSFRKYSERITAHNTSHEQGAAFAACGYAQTSGKPGIAYATSGPGATNLVTGICNAYFD SLPVIFITGQVNTFEAKDRLRVRQRGFQETDIVSMVSGVTKMAVYIESPDKIKYYLERAF AMAMEGRRGPVLLDIPMNVLRADIDADELIGYNKEFQGNDARRFQEELQKAVMKAKQPCF LFGNGIKSSGLEEKLKCVINTLKIPFVTSMISFDVFSDSPYYFGFIGAYGERAANFIVAK SDLLITIGARLDIRQVGAQREKFAPNAEIIRVDIDDGEFTYALHEDEKQYLLSAEQALDA AVNISCTQSFSEWLTICRTIKEQLKGYDDREPNRWIQEISRCIPRDCIITTDVGQNQIWV AQSFVVKEKQKVLFSGGHGAMGYSLPAAIGAFYGSGGKTIVSINGDGGIQMNIQELQFIA REKLPIKIVIMNNKALGMIRHFQEMYFGGEYYLTNKDGGYSAPDFCKIAEAYGIPNGKIS NFDDLDHSEWIDNAGPFLLDIQLDGNTYVYPKLEFGKPNQDQEPLLDRKLYKELMNLGIV NVENA >gi|224461045|gb|GG657759.1| GENE 2209 2316847 - 2317791 466 314 aa, chain + ## HITS:1 COG:MA1185 KEGG:ns NR:ns ## COG: MA1185 COG0451 # Protein_GI_number: 20090051 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Methanosarcina acetivorans str.C2A # 4 296 3 301 311 78 27.0 1e-14 MKKIVVTGATSFIGVHLIQKLLDENCYIYAVIRPNSANKERLPDNSLIEVVELDLNDIGR LPDIIHEVVDVFYHLAWEGVRAASRNDAELQQKNYTAAIEAVKSAVILKSNIFIGSGSQA EYGKISGKVDEESVCNPVTEYGRAKYKACLETGKIAKKNGMRFIWARIFSVYGEYDFPGT LVMDSLYKMSRNIAIDLTDCSQVWDFIYVVDVADVLVKFANVNCADGIYNIASGRPRVLK KFVEDMKSITKSESELNFGAIPYSVEGPVSLEPSVDKLKKELEWEISTAFTEGIKKMVFG EDTDEKNKYINTYV >gi|224461045|gb|GG657759.1| GENE 2210 2318150 - 2318728 325 192 aa, chain + ## HITS:1 COG:CC2889 KEGG:ns NR:ns ## COG: CC2889 COG0463 # Protein_GI_number: 16127121 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Caulobacter vibrioides # 8 180 158 329 330 96 28.0 3e-20 MYFFRSCYYNLIKKFSNVEQIEHFTGFGLYDKSFIQVLSDLKDPTPFLRGIVAELGYKQK VIPYEQQKRRAGKTSNNLYKLYDAAMLSFTSYTKIGLRLATFVGVICGVISFIVAIIYLI LKIVYWDRFVAGMAPILIGMFILGSVQLIFIGLIGEYILSMNARIMNRPLVIEEERLNFE TFDIEKENQHEF >gi|224461045|gb|GG657759.1| GENE 2211 2318718 - 2319785 187 355 aa, chain + ## HITS:1 COG:STM2091 KEGG:ns NR:ns ## COG: STM2091 COG0451 # Protein_GI_number: 16765421 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 6 352 5 353 359 355 45.0 9e-98 MNFNLDFFKDKKILITGHTGFKGSWMCKMLTMAGAEVTGYALEPPTNPNLFTLCKIADGM RSVLGDVRDLPHLKEVFTQIQPEIVIHMAAQPLVRESYQNPVYTYEANVMGTVNVLECIR MTPSVKSVVNVTTDKVYLNREWEWGYRENEMLNGYDPYSNSKSCAELVTSSYVNSYFNNM DIAVTTCRAGNVIGGGDFASDRILPDCIRAAAKGMDIIVRNPFSTRPYQHVLEPVAAYLL IAQMQYDKKELAGNYNIGPDESECWTTEALVDLFCKKWEKMTGNAIKWINKYDGGPHEAN FLKLDCSKVKKVFGWRAKWDIDTAMDKIIEWSECYINNADIEECMENQIMEFCNL >gi|224461045|gb|GG657759.1| GENE 2212 2319800 - 2320318 274 172 aa, chain + ## HITS:1 COG:no KEGG:Closa_0554 NR:ns ## KEGG: Closa_0554 # Name: not_defined # Def: GtrA family protein # Organism: C.saccharolyticum # Pathway: not_defined # 9 168 8 160 162 124 50.0 1e-27 MMKNIGIFIWRILENIVRFIIIKIFHMKLTDNDWDKIEQFIRFGIVGFSNTIISYSIYAA ILLFLQKNKLIPRIDYILAQFIAFSLSVLWSFYWNRKCVFNAENENIFWPRALLKTYISY GFTGIVLNSILSIVWVRCFGMPKIIAPIINLLISVPLNFVLNKFWAFKKNDD >gi|224461045|gb|GG657759.1| GENE 2213 2320337 - 2321986 94 549 aa, chain + ## HITS:1 COG:no KEGG:Ccur_10460 NR:ns ## KEGG: Ccur_10460 # Name: not_defined # Def: hypothetical protein # Organism: C.curtum # Pathway: not_defined # 37 549 26 534 546 139 25.0 3e-31 MKQYKEDLKYFLNNKVYILCIIVISVISYGFAAANNSVSIDDLDGDRYVGNGNIMLSAGR FGMVFWSKLFGYKTKWPQNSFAIDVIAVVLFILSAVNFCILFYRIAKDKICMKAYTVFSC MLVSYPLMIEIWEYTTANLCVTGGFFFVSIALLIMREQMQGKFKRYCWFISVLLLTIVCA SYESLAVVYVFMVFAIFALQILFETERKTTLKMILKHGMIYASVLITGVIFRVVIHRSFL YLFRLTEGKNGDTEIMWGRVSKLQSIKDLITGGIKQYILKGIIYFPITVLLILGLIFIMI GIILCVRKKAYMLLLPGAGMLFSLILLSVIQGSISNYRSSQVFAVFVAFSLMILIYILQD SKNSLLKIISGIVTIASVILCIHQAVYMNYFLTINHLRSEEEANVVRDIGRDLKATTDLN KPVIFTGRYVLSEGITEAVSIQKDDFRWKVYSKALSVYIGVDYEKIYNNTERKLPVNNIN SVITWSITAFDSQESMEKLFQYYGFDYKAANFVQIYSEAAQFVNENKIPGYPAEGYIVDR GEYIIVNLG >gi|224461045|gb|GG657759.1| GENE 2214 2322072 - 2323298 550 408 aa, chain + ## HITS:1 COG:NMA0640 KEGG:ns NR:ns ## COG: NMA0640 COG0438 # Protein_GI_number: 15793628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis Z2491 # 4 402 3 384 387 160 28.0 4e-39 MKKIAIVTMGVKLNNENGYTRFRFLAEFLAAQGYDVDLLTTSFQHWAKKQRNLESIEKDT YPFNLRFIPEPGYKKNIDVRRLWSHRIAAKNLKKMLVEYGDYDLIYCEIPPNDVALAAAK FAKDNNIPFVVDVNDLWPEAMHMVIDIPIISNILFYPLFRSAEKVYNLCSGVVGTSDEYT GRPFKRSNRDIPKATVYVGNELRQFDEGAAINMPHIEKSSDEFWVSYAGTIGTSYDIKTM IQAADVLKKRGYKDICFKILGGGPLKEELESYAKTLTGNVEFVGYAPYEKMAAYLKKSDI LVNSFVKKAPQSIVTKIGDYLAAGKPMINTCSSIEFRNKVISDGFGINIEAEDMTILADA VLELYNDEEKRNQMGYRARAVAEEQFDRPCSYNKIVQLMEELLKKDSM >gi|224461045|gb|GG657759.1| GENE 2215 2323298 - 2324164 292 288 aa, chain + ## HITS:1 COG:SP1367 KEGG:ns NR:ns ## COG: SP1367 COG3475 # Protein_GI_number: 15901221 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 7 282 6 279 281 309 52.0 5e-84 MDYSKEEIKRIQKKSLEMALYFKKICDENNLLFYFCGGCCIGTVRHQGFIPWDDDVDVFM PRKDYELLKRLWKKNADTSKYALVDSNEFYTDHNLFLNIRDNNTTFIRPYQNNLDISHGL ILDVLPLDGCPSGKFRRKVQLMWAMVYSLYRSQLVPENHGKIMELLGKAALAIIPSFKLR YKVWRFAEKQMTKYRIEDCEYVTELCAGPHYMKNRYPKKAFDKAVYKEFEGHMMPVPQGY DAYLKIAFGDYMKLPPEEKRAAHHDVLICDLDKNYKHYKGKYYCCKQK >gi|224461045|gb|GG657759.1| GENE 2216 2324203 - 2324643 248 146 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570159|ref|ZP_03779184.1| ## NR: gi|225570159|ref|ZP_03779184.1| hypothetical protein CLOHYLEM_06255 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06255 [Clostridium hylemonae DSM 15053] # 1 146 1 146 146 200 100.0 3e-50 MKRLRSILINKETFSYIVFGALTTLVNFIVFIGFNYIMGRQYYLLSNIFSFIAATLFAFI TNKQFVFESKEWKAGIVIKEAISFVSARIGTFLLVEELGLLFAVQVIQVGRFQFYLLDGI LIAKIILAFTAVLLNYILSKYFIFKT >gi|224461045|gb|GG657759.1| GENE 2217 2324660 - 2325379 215 239 aa, chain + ## HITS:1 COG:L11285 KEGG:ns NR:ns ## COG: L11285 COG0463 # Protein_GI_number: 15672191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 2 236 5 239 241 235 53.0 5e-62 MKVLLVIPAYNEEDNIVRVIGKVEQFKKRQPAYELEYVIINDCSGDNTMKICTEHNYNVI NLIQNLGIGGAVQTGYIYADRHGYDIAVQFDGDGQHDINSLPQLLDPVINGEKDFVVGSR FLHGQSEFKSTFLRRIGISYLSFIIKVFSRCSVNDPTSGFRAANRKAIKYLSANYPVDYP EPESLVDLSRHSFRIGEVQVNMLEREGGVSSISSWKSVYYMIKVSLAIICSSLQRKVGD >gi|224461045|gb|GG657759.1| GENE 2218 2325384 - 2325737 314 117 aa, chain + ## HITS:1 COG:no KEGG:Olsu_0597 NR:ns ## KEGG: Olsu_0597 # Name: not_defined # Def: hypothetical protein # Organism: O.uli # Pathway: not_defined # 1 105 1 105 123 74 40.0 1e-12 MSDTLRMELIVLAIVFLVIVVYNVNKKNLKLKYSLMWILAAVIMVIIALVPELIYKIVKY VGFETSSNFIFFFCFIWLIGMNLSLSVIVSRQSEKIKKIIQEVSLYKSENEKSKSEK >gi|224461045|gb|GG657759.1| GENE 2219 2325808 - 2327412 614 534 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1244 NR:ns ## KEGG: bpr_I1244 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 84 517 141 576 589 230 33.0 1e-58 MKYVKINNSKNEKRLAVFISILFSLLLFVGHYANFTGKGVRGFAFLLVGLLAGFLLLYLS INILMYILKSWDSCGERKSCSEWKIFLIIFIICLICWLPYFLAFYPGIITWDSEFQLEQV LGLRELNNQQPLIHTLFIRLCYRIGTALIGNPNGGAACYIIVQMLIMSCIYSYVITQFYR IGLKKWCIFLCVLYYAVMPFNAMYSVTMWKDVIMGGIVLLFSTLLWRIGENDNIRIWNWI FLCISGILMCLLRTNGFYAYLICIPLMIIFMKKYRKQMIIACVCTLLPTMIVKGPVMNKV GIEQSDAIEALSIPAQHIARVIVDGGRLTKEQEDLLRNVVDIDRIEETYTAHISDPIKTL VREKNNQDYITTHKSEFLKLWFELGCKYPYEYLKAQIDQTRGFWSPGVKYWVTATEVKEN TFGVVRDSKLPTGLVDKVFMNLESVLKGIPILGWLWTIGIYTCIMLFMLFWSIYRRLNIL PFIPVAAILLSLMAATPVFAEFRYVYSLIVTVPLYVVIGTKQESSSYYLMNQKI >gi|224461045|gb|GG657759.1| GENE 2220 2327464 - 2328858 984 464 aa, chain + ## HITS:1 COG:CAC3046 KEGG:ns NR:ns ## COG: CAC3046 COG1316 # Protein_GI_number: 15896297 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 40 302 27 294 341 169 36.0 8e-42 MANRRGRRGRRRRKTGSWFTRLSTGKKVGVCLGGVVLALAASGVVYVAAKLGKIDTKEIP QEDIIINAEAEEAGEGFTNVALFGVDSREGDLAEGTRTDCIIVGSLNNKTKEIKMASVYR DTLLDIKDGELQKCNAAYSFGGPEQAINMLNKNLDLDIQKYITVDFSVVAEVIDLLGGVE IDVKDEEVQYINEFIDETGAVAGKEVHYVEQGGSQTLDGVQATTYARIRSTAGGDFTRTE RQRLVIEKMVDKLKGSNLATINDIVDKVLPSISTNFTTAEILSYAKDFAKYTLGENTGFP FDKTTDTISGLGSIVIPVTLADNVQKLHEFLYGKSEYAVSSTVQNISGSIVSRIGQREAT DDETLNSQTYTTAPEDAAQEKGNNYSGGGNTYTPPSNPGSSGNGTGNEGNSPGGDNSGGS GGSGNNGGGGDGGSGNTEQPETGGGSGGTTPPAPDTPSEGGTTE >gi|224461045|gb|GG657759.1| GENE 2221 2329030 - 2330856 1771 608 aa, chain + ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 608 1 608 608 730 60.0 0 MCGIVGYIGDQQAAPILLDGLSKLEYRGYDSAGIAVYNGEKIDMIKSKGRLKVLSELTHD GETLPGTLGIGHTRWATHGSPSDINAHPHFNKDESIVVVHNGIIENYLKLKKKLERHGYE FVSETDTEVIAHLLDYYYNGNPLQAVTKIMHRMEGSYALGIVFQDHPDELYAVRKDSPLI VGHTKGGNIIASDVPAVLKYTRDVFFIENEEIVRMTDSTMEFFNVDEEMIEKESVRIEWD VNAAEKGGYEHFMLKEMYEQPKAITDTFSPRVKDGNIVIDELNMTEEEIKEIKKIMIVAC GSAYHAGVTSKYIFEGLARIPVEVDVASEFRYRDPILEDGTLVVVISQSGETADTLAALR ESKARGARVLGIVNVVGSSIAREADNVMYTWAGPEIAVATTKAYSAQLISLYLLAMKFAY VKEKIDDTVLADMLEDLKSLPAQVEMLLNNKEKIQRFANRYLAARDIFFIGRGIDYAISM EGSLKLKEISYIHSEAYAAGELKHGTISLVEEGTLVASVLTQKALYKKMISNMVEVRTRG AFVMAVTMEGNTEVERAADYVIYIPETNRYFTNSLAIIPLQLFGYYVSVGRGCDVDKPRN LAKSVTVE >gi|224461045|gb|GG657759.1| GENE 2222 2331015 - 2331731 188 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 6 232 8 223 234 77 28 4e-12 MVFGGILAGGIGSRMNMADMPKQFLNLGDKPMVIHTLEKFLLCPKIEQIYVGVHPNWVVH MEDLVDKYINIRKECVHIIPGGGDRNSTIMNIVDAVERDYGESEEHYLITHDSVRPFVTS RILNDNVEAVRRHKVCDTVIPATDTIVVSEDGSMITDIPVRSKMYQGQTPQSFQVDLLKK LYAALNEEEKAVLTDACKIAVVQNEPVYLVKGEPSNLKVTTVSDYKVAQAMVGGKVVD >gi|224461045|gb|GG657759.1| GENE 2223 2331724 - 2332737 757 337 aa, chain + ## HITS:1 COG:SP1270 KEGG:ns NR:ns ## COG: SP1270 COG1063 # Protein_GI_number: 15901130 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 335 1 338 340 389 53.0 1e-108 MINYVYQLVAPGTFSVKYEETQFGDQVVIKPRYMSICHADQRYYTGQRERHILDKKLPMA LIHECCGEVLYDPSGKYKAGEAVVLIPNVPGEHSDIILENYAKGAGFLSSGKDGFLREFI SLPEDRLVRHEGIPQKLAAITEFISVAAHSIRRFDGISHKIRDRIGVWGDGSLSFIVANL LKQAFPASEIIVVGKNPGKLSYFTFADETVLREELPESFEVDHAFECCGGDGSYYAIEDI IRYINPQGTVMLMGVSENRVAVNTRDVLEKGLSVIGSSRSGRADFEQAVKWMKNERFQKR LDMITFEDEKVSSVEDIHRVFRTDRNTPFKTVFEWGL >gi|224461045|gb|GG657759.1| GENE 2224 2332749 - 2333729 736 326 aa, chain + ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 4 324 6 327 328 264 41.0 2e-70 MTAVSIIVPVYNVEKYLNKCVDSILGQTFEDFELILVNDGSVDRSPSICRDYADKDGRVR YISQENMGPGRARNVGIEAAGGAYILFVDSDDYIAENMLEILYGNITTSGADMATCGLYN VYQQRCIPQYEGIEQFACDGGEAFGLLLTGEKIPGSSCNKLIKAEILKDIGYPEGIVYED VGFHTELMQKVQSVYVDTTPLYYYVHRENSITTRKFDSDAMMFIYAYEDTLRVVEKKYPA ILTEARFKLIWAYFAILDRMLQEDGYREIPEYRQVIRFLKRNTVRIVKNPYFHRARKLGA LALLLNVRLYRALTMMNEKRSKGLFS >gi|224461045|gb|GG657759.1| GENE 2225 2333730 - 2334815 1013 361 aa, chain + ## HITS:1 COG:HI1698 KEGG:ns NR:ns ## COG: HI1698 COG0438 # Protein_GI_number: 16273585 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Haemophilus influenzae # 4 355 1 349 353 108 25.0 1e-23 MAEMKKICFVDFDMSVTGGVEQVTASLANELSGMYETFVYAVNKGGESAYKLDERVVFTE GLTGEKRLRGMIQGTFRPFIHYVKENHIDIVILMGNYPALIASFTRFFTKAKYIYCDHGG LMNQWKQKDITAIRFWDALTSHKVVVLTEKTRKDYISRFHTRPGKVACIYNWIEDKVAAA RTDYNDSSRKILSVGRFGKEKGYDMLVEMAKTVLPAHPDWQWHVYGTGETFEETAAKIAE YGLGFQLILKGNVKEAYRLYSEYAFLVLPSYREGLPLVLLEASAVGLPMISFDVETGPNE IIEDGRNGFLIPPYELEKMEAKIEELISDGGKRRRFAEYDGMRDKFSKEKILKQWIEVIE E >gi|224461045|gb|GG657759.1| GENE 2226 2334845 - 2336338 1349 497 aa, chain + ## HITS:1 COG:no KEGG:BCE_5386 NR:ns ## KEGG: BCE_5386 # Name: not_defined # Def: polysaccharide transport protein, putative # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 5 486 16 493 508 268 34.0 5e-70 MIANIFLQVIVFLSGIVLPRFFLEAYGSSINGMVTSVNQFLIYLGLAEAGVGTASVVALY GPLAKEDQSGINGILSATRRFYNRSGYLFGALVAGFVFIYPYLITQQLSASLVRTMILIL ASSTLVDYFCLGKYKVLLTANQKGYVIAYIQALGTTLNMAVTIVLIYNHANVLLVKGIAT LVYILRFFLVKAYVRRWYKEVDFKAEPKMDGLKQRGAALLHQVVGVIVNNTDVVLLTVCL GSKSLIEVSVYGIYNMVIYAMNLLLTSFSNGLTAGFGEVISKGEKQVLRDSYSNYEYTYM IILMCVCTCMGVLLLPFVSIYTLHVTDADYIRPFSAILFTLIIFLQNVRIPGLTIICAAG HFKETRGQAVLEAAINIVVSLSLVWRFGMNGVLFGTVCSYAFRSVEIILYNRKYLVEGTG KSTLKRILRNVLAVIVIICVFINVVPQQMTSFLTWGIYAVITGGVSMIILLGLNYICEPA EFKKVVQRMKSIGRQRG >gi|224461045|gb|GG657759.1| GENE 2227 2336346 - 2337440 1354 364 aa, chain + ## HITS:1 COG:glf KEGG:ns NR:ns ## COG: glf COG0562 # Protein_GI_number: 16129976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Escherichia coli K12 # 1 357 1 357 367 446 59.0 1e-125 MYDYLIVGSGLFGSIFAYEAGKKGYKCLVVEKRDHIGGNIYTKEVEGIQVHEYGAHIFHT SNKEVWEYIRQFAEFNRYTNSPIAYYKGEIYNMPFNMNTFNKMWGVVTPGQAQEKIAEQI EKFGVEEPKNLEEQAINLVGKDIYEKLVKGYTEKQWGRRATELPPEIIKRLPVRLTYDNN YFNDCYQGIPVGGYTQIIEKMLDKTEVRLNTDYLEEKEQLDKISRKVVYTGPIDAFYEYK YGELEYRSVRFETEVLDEENHQGNAVVNYTEYEVPYTRIIEHKHFEFGTQPKTVVSKEYS APWKRGDEPYYPVNNERNNLLYEKYAREAAEEEKVIFGGRLGRYKYYDMHHIVAEALKCA EENL >gi|224461045|gb|GG657759.1| GENE 2228 2337546 - 2338760 1192 404 aa, chain + ## HITS:1 COG:CAC3046 KEGG:ns NR:ns ## COG: CAC3046 COG1316 # Protein_GI_number: 15896297 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 42 274 29 265 341 150 38.0 3e-36 MAKNNKSLKAEKAIKARRKKKQRRRRRAVVLVVEVIMLLLLSGVAYAMMKFDKLQAVNID KKDLQLNEGVEEKEGYTTIALFGGDSRDGQLEEGTHADTIIVAAIDNKTKEIRLASIYRD TLLQQKNMSYNKANHAYFAGGPAESISMLNKNLDLDIQDYVTVDFKALVDTIDLLDGLDI DIKQEEVQYMNEFLQETADVAGTKAEFITESGKQHLDGTQAVTYARIRSTAGGDYTRTER QRLVIEKIFEKVMHTDLATINKIIDTVFEQVSTSFSLKELIGLASDVTKYKLGENTGFPF DVEDGITYQNAGSVVVALGLAENVKQLHEFLYPNEEAGNVSETVRNISDEIAYVTGVVRP ASLDENKDGESGNTDTGNDAGGNTQGAYGEGTSGGGTDDTGTYQ >gi|224461045|gb|GG657759.1| GENE 2229 2338846 - 2340330 1746 494 aa, chain + ## HITS:1 COG:no KEGG:Closa_1330 NR:ns ## KEGG: Closa_1330 # Name: not_defined # Def: cellulosome anchoring protein cohesin region # Organism: C.saccharolyticum # Pathway: not_defined # 131 445 230 560 620 78 27.0 9e-13 MKILKKISIILLSLCLCVPCFSMVAEAADGRISFTDPETAVGEMVEVKCVVKSTSGSLGN IEVKLTYDSSALRFDSGDGVTADGDGALTCTGSGGSEEATFNIKFQALKEGDTSVSVSSA TIASSGGGTLTLDQGSSAVKIAEGDPSKITDGGNTSSADDIDVEVNGTAYKLSDNFAEAD IPAGYTKTEIQFEGQARQMVAQEASGITLGYLLDGEGKGDFFLYNADNATFSPFEQINIS DTTSIALLSEKAGGKLPKTFQEVTLTLNGKDFPAWQNTEKDGFYVVYAVNSSGDKGYYQY DDGEGTYQRYEAADTTEEKTDNSLMGKIGNFIDKHIQMMVLIVGLGALIVLILIIVLAVK LHNRNAELDDLYDEYGIDEEEEPEKNRPAVKDKSATRSGLKKKKEEDSFDDFEEDDFDED DFEDASYDDDDFEDYEDDLIDEDDFEPYDDGALYDDSLDDDIDDLDDLLSESKTKKRGHM ETDDMFKVDFIDLD >gi|224461045|gb|GG657759.1| GENE 2230 2340421 - 2340549 84 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570173|ref|ZP_03779198.1| ## NR: gi|225570173|ref|ZP_03779198.1| hypothetical protein CLOHYLEM_06269 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06269 [Clostridium hylemonae DSM 15053] # 1 42 1 42 42 70 100.0 4e-11 MPKRKSIMQIRADTGKPALPHVTINISYISFSVYTKLETISN >gi|224461045|gb|GG657759.1| GENE 2231 2340554 - 2341213 205 219 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570174|ref|ZP_03779199.1| ## NR: gi|225570174|ref|ZP_03779199.1| hypothetical protein CLOHYLEM_06270 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06270 [Clostridium hylemonae DSM 15053] # 1 219 1 219 219 418 100.0 1e-115 MALIKCPECGNDVSTKATECPNCGCPLNKAEFSNENKTKKKLSVKKIIIAIVALIFIFFL LIEIFLTKDYDAPLDYSNVLGTPADDLDDIVMTEDSMSILFKEDGTLLSGRESVVYNDMN GKTEYRCFDAEIKGLAPYDIYYVSWSTGSGNEEQELFDDNTRDTIIKQYDKLYGEHSDSS TQGDGRVEHKYRWKLKDKKIFEITVYSTMNYMCLTWKFE >gi|224461045|gb|GG657759.1| GENE 2232 2341227 - 2342009 379 260 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2506 NR:ns ## KEGG: Cphy_2506 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 35 257 6 245 249 90 26.0 6e-17 MALIQCPNCGKEVSDKAEKCPNCETLLREPPKKVCKECGQELNEGVLICHKCGCPVSTET SERGSKKKGSKKLIIIAVLIIAALLIIIFGVNSYNKKVEENKKIEISENYGINIKTATTT MLKGASDAEKLGVLIHDVWSNTIFEKSDAETDMYTKTDGRFNNDFNDSLNKLFADSTYQT RLSAVKSNQTNVERIMKKLQDPPEEYQEAYNAIKDYYDAYLEIINLVINPSGNLQTFTSN FNDADSAVVKYYAAMKIYTE >gi|224461045|gb|GG657759.1| GENE 2233 2342381 - 2343280 865 299 aa, chain + ## HITS:1 COG:BS_ydeC KEGG:ns NR:ns ## COG: BS_ydeC COG2207 # Protein_GI_number: 16077582 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 4 294 2 288 291 147 28.0 2e-35 MEKKKIQTDKEGKELRQPLDGKFPIAAEFQKLSYYAYGLCISHWHPEMELLVVTEGALEQ RIGEETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKYVKT LQSQKDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYELKVQQMMLELWELLYKRTG HVEENAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVFRQSPM EYVTSYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKKEICGK >gi|224461045|gb|GG657759.1| GENE 2234 2343565 - 2344590 1210 341 aa, chain + ## HITS:1 COG:L82310 KEGG:ns NR:ns ## COG: L82310 COG1879 # Protein_GI_number: 15673617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Lactococcus lactis # 12 335 15 320 324 123 30.0 5e-28 MSKRLKSTAILLVIVSMLVCACSSGGGKADTEKTEKKTEDSGNKDKITVGATLSDFTISF QAAMYNELLDAQKEYDNIEFILQDGASDSALQVNQIETFITQGVDAILINAVSDAVEPSL KKAMEAGIPVFAVNRSITDENAYSYFIGANDTLSGEQMANCLLDMIEKDQMDSCNILYIQ GVIGATYQTLRQGGFDSIMDEKGYDMGVNILERIPCKHDKETVISSIQNMLNKYPAGEID AIVCEGPDDAVGALQAVQSAGRTELVGKIVGMDMPTEVWDAIKAGKIYGTVLQDPAEQCE VGIKTIETYFFGDKDSLKEKFIETDLPMVTSENVNDVTPSW >gi|224461045|gb|GG657759.1| GENE 2235 2344713 - 2345630 1236 305 aa, chain + ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 8 297 25 317 322 178 41.0 2e-44 MKREYNMLLVLVVMLVVCAFISPTFRTVQNLINLLGHNAVYGLLAVGMAFVIITGGVDLS VGSVCALSGVMSAYAFIDYGFIVGLAAGLAVGIVCGFINGILQTVIGMNHFVATLGMMTI ARGAVYIITSGFNIYGIPEAYGVVGMGYLGPVPVAGIIWLACVVIAFLVLKYTGFGQYVY AIGGNMNAAWLSGINTKLVKTVVYVICGFFAGLAGVVLSCRTLLAAANAADTYELTAISA CIVGGLSLDGGRGNVWGSVVGVLILGLILNIMQLTSVSSYWQDAVKGIIIIGAVAVDCMS KLKRD >gi|224461045|gb|GG657759.1| GENE 2236 2345642 - 2347171 2001 509 aa, chain + ## HITS:1 COG:BH3730 KEGG:ns NR:ns ## COG: BH3730 COG1129 # Protein_GI_number: 15616292 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Bacillus halodurans # 5 482 2 477 499 382 43.0 1e-106 MKGNVLEMKHISKDFSGVTVLEDIDFTLRQGEVHALVGANGAGKSTLMKIINGIWARYSG EVYLNGTKVRFKNPIDAAKRGIGMIHQELDLTPNLTVAENIYLGREPKKSGTILIDKRKM AEEAQKLLDELHFDVDAGEKVVNLPTAKQQLALIARTVSMEASLIIMDEPTSSLSISEID NLFRVIKELKSRGISIIYISHFLEEIFKIADRVTVLRNGRLVGTKYAAETQIGEVISMMV GEGHTQDKKFYREHPSDEIHLKVENMSQVQGQVHDISFVLHKGEILGVAGVLGSGRTEIG KMIFGAMKKRPGYKLELSGGTCAMKSPKEAVNRGVAFVSENRKTEGLIMKASLLSNIALV PLARQRTPWVNHRRLERTAKTMGSRMSLKYSAMSQTADSLSGGNQQKIVLSKWLATDINL LILDQPTRGIDVGAKNEIYALADELARKGTSIIYISDELEELYNLCDRILVIKKGGIVAD MENYDRQVTKAELFEKMITDKEGETVDLL >gi|224461045|gb|GG657759.1| GENE 2237 2347213 - 2348388 1201 391 aa, chain + ## HITS:1 COG:TM0412 KEGG:ns NR:ns ## COG: TM0412 COG1063 # Protein_GI_number: 15643178 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Thermotoga maritima # 1 375 1 379 395 256 37.0 6e-68 MRGLQLCGTWKPRRGYTPTQREIEDKRALCGKNIWYAPKIEVTELPTPEPADDEVLMEVG ACGICGSDTCFLDTDEEGYLDYVGHTRLPVIFGHEFSGRVVAAGKRVTRFKEGDLVTAET MNWCGKCMPCRKGMFNQCENLEEIGFSLNGGFGQYLTAKEKYCLDINQFKEVYGSEAKAL EAGALIEPTAVAYNGMFIRSGGFLPGSYVAVFGAGPIGLSAVQLAKAAGAAKVIVFEYSA PRLELAAKVGATDLCSLAHIASQGGTPADTMRELTDGKGVYMAVECTAFCNKNIPYIQQA LAVGGKVVQIGHHAGRTEMFGQYFQKSGAALYGSNGSSGHGIWENVIRLIASGRIDPGKL VEKCFTLDEAAEGLREAKNGTGGKYLITPNR >gi|224461045|gb|GG657759.1| GENE 2238 2348422 - 2349606 1296 394 aa, chain + ## HITS:1 COG:TM0412 KEGG:ns NR:ns ## COG: TM0412 COG1063 # Protein_GI_number: 15643178 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Thermotoga maritima # 1 353 1 358 395 226 35.0 4e-59 MKALQATGTWIPKPGYEPTEREKRDRRAVSGDRIYSRPVIGFVEIPVPEPKDDEVLMRIG GVGVCGSDTTFLGADEQGYSRYAGHCRFPCVIGHEFAGEVVKVGKAVTMFKPGDLVTAET MNWCGECEACRMGMYNQCENLEEIGFTLDGAYAEYLVAKEKFCFDISALEHIYGSKSKAL HIGALIEPLAVAYNGIFERGGGFRPGSDIVIFGAGPIGLSALSLAVAAGAGRVIVFEKSA ARMKLAEKIGATYVCDIDGLLAEGLSPGQKVLELTGKKGAEVFIEATEFQRDNIPEIEQA LAVGAKVIQIGISSKTMEMDVERLQVAGASYHGTIGSAGHGIWQNVIALIAQGRVDPQIY MNPRIYTLEESLEAIEDAAKCGAGKNVVDPGLRA >gi|224461045|gb|GG657759.1| GENE 2239 2349623 - 2350771 1214 382 aa, chain + ## HITS:1 COG:SMc01163 KEGG:ns NR:ns ## COG: SMc01163 COG0673 # Protein_GI_number: 15964109 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Sinorhizobium meliloti # 2 379 5 375 376 160 31.0 5e-39 MKKLKIGLIGIGYIGCAHVTAIRRCPNAILHAVADTDRQLLERKKEELGLEKVYDNVDEM LADPEIDVIHDCTPNHMHLELNRKIIQAGKHVFSEKPVAASAKESAKLLDILGENPDIVA GVNHNYRMNVMVQDMKHRVQSGEIGRPRLVYGSYLLDWLLYDTDYDWRLEKKFAGKSRAV ADIGTHWMDTAQTVAGARITEVFANLETMLPVRKRPVKNSASGEIAYEEYQIDTEDYGAV FARFENGAFGLFHVSQISPGKKCRLDLTVDGETDSLYWNQEEADRLWAGHRGRGNEYIFR DPKMLPPETLAYTYMPAGHPEGWNDAVYNNIHSFYTFILEGKKTGRDKPDFATFEECHYL NRLTEAILESSRTKQWIRLEDE >gi|224461045|gb|GG657759.1| GENE 2240 2350785 - 2351762 1191 325 aa, chain + ## HITS:1 COG:mll3362 KEGG:ns NR:ns ## COG: mll3362 COG1082 # Protein_GI_number: 13472915 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mesorhizobium loti # 62 311 67 321 347 103 28.0 4e-22 MKLGLCTGTYSDLPLDEVCRLAVLYGYETLEIETFERDNLHLDIHTIFDGDNIRKFKKKI QDYGLEISTLGNHPESQLVMGPFGQDTDDIYHGTKEEKIKFGTEAVIRAAQAANEMEIPV VVGFTGCENFGRVCQWPDARAWEREEEIFAQRWGKILDKYDEYGVKFAHEPHPNQMVYDI ETAQRSVELLGQHKAWGFNFDPANMMMYGIDVEAFIDLLGDRIYGVHAKDAQIVKQNAGR SGLNPHGNYRRIDRGFRFRIPGWGNVNWQDVITELSMVGYFGPLTFEHEDITMSRQDGMK KTAEFLKPLLIDAPFEGRSDLNFRF >gi|224461045|gb|GG657759.1| GENE 2241 2351813 - 2352847 1036 344 aa, chain + ## HITS:1 COG:TM0414 KEGG:ns NR:ns ## COG: TM0414 COG0673 # Protein_GI_number: 15643180 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 8 338 4 332 334 266 41.0 6e-71 MKDCVTAAVIGLGRIGRTHAEILVSRVGSVRVKYAADAFLNEEMKKWAKELGIKGVTDDP EICLQDPEVDAVYICTSTDTHSEYITRAAKAGKHIFSEKPLDSDLVRLSGALREAEKAGV KFQTGFMRRFDRNHSKAKALIQSGKVGRGQMIRLSCRDTVQSPYEYLKVSGGIFFDMMIH DFDMVRFLTDSEAEEIYAAGGVFTDERLNDIPDVDTAAAFVRMKNGMLAVIDNGRQCWYG HDQRSEIFCTEGTVQVMNEHEDTVVVKKGDGIYAPKPPDFFIERYYEAYVAENQSFVDSI LFDRPAAVTAADGVEPIRMAKAAQLSLEQNRPVKLSEITEYRIV >gi|224461045|gb|GG657759.1| GENE 2242 2352941 - 2353843 820 300 aa, chain - ## HITS:1 COG:BS_ydeC KEGG:ns NR:ns ## COG: BS_ydeC COG2207 # Protein_GI_number: 16077582 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 2 296 1 288 291 149 30.0 7e-36 MIREIITDKNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQ VNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPL LNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQR SQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQT PFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNLMN >gi|224461045|gb|GG657759.1| GENE 2243 2354189 - 2355217 500 342 aa, chain + ## HITS:1 COG:AGl634 KEGG:ns NR:ns ## COG: AGl634 COG1879 # Protein_GI_number: 15890435 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 79 342 69 328 331 114 30.0 2e-25 MKKINNLHKLLMTVLMIAMLAFAFTGCTSGPQKEEKTESKSNNDKSSLEGLKIGFCVTNR DQFQTEQEGIAKELCDSKGIELSVADAKEDISTQISQVSSFVNAGCDLLMINCVDAESIQ EIINAAGDVPCVFFNRMPSDHSVFDENHYYVGMSDYDCGYDMGKFMAEWLKDNNKTDTAD GVLFLGPLGATNTVSRTDGIKKGLADSGYKVNWVFEDTAEWDRSKAMDKFTQFMGSGKKF DFIAANNDDMALGCIEALTAAGYSAPFDFPIAGIDATENGLLAVGDGTLTATFDQSPSKM TNYCFEIAFAILQDTDMPEEVKDFTWIYKAEMVTADNVDDFK >gi|224461045|gb|GG657759.1| GENE 2244 2355313 - 2356260 363 315 aa, chain + ## HITS:1 COG:BS_yrbE KEGG:ns NR:ns ## COG: BS_yrbE COG0673 # Protein_GI_number: 16079829 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus subtilis # 4 314 25 334 341 299 47.0 6e-81 MAYRIPEAEVVGIADINFERAEEIAKKYKIINVYEDYKELLGNPDVDAVFICSTTDTHSP VSIAAAKAGKHIFCEKPIDRKLERIIPVLEEIKKAGVKYQVAFNRRFDHSYKHVRDVVRE GKIGNVHIVKITARDPKLAPISYLKDSGGLFLDMCTHDFDMVRFLSGSEIVEVTAIGTCL VDKSVEKIGDIDTAITTMKLSNGALAVIDNSRQAVYGYDQRVEVFGSKGCVCADNATGDT TSIYTVEAVTKNKPLWDFLERFNDAYVEEARCFIDSCLNGAEIKADANDGLQSIKAALAA ARSWKLGGIPVKVEE >gi|224461045|gb|GG657759.1| GENE 2245 2356410 - 2357909 190 499 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 259 472 12 221 312 77 29 2e-12 MDDFILKMSGIVKEFPGVKALNNVELNVHPGTVHGLMGENGAGKSTLMKCLIGLYRRDAG TIYFAGKEVNFLSVSEAIKSGISMINQELCPIPERTVAENIWVGREPKKNILMVDHKRMC VQTRELLKKFDIKISPDTPLKYLTVAQMQMIEIIRAVSYESKIVIMDEPTSSLTQSEVAQ LFKIIKNLKEQGISIIYITHKMDEVFQICDEVTVMRDGEYISTNNIKELEMDGLISKMVG REITQLFPKKECPIGDVILRVENISIDNFVHNVCFELHKGEILGFAGLIGAGRTETMEGI FGLRKLTEGNIYKNGDKIKIDCPGDAIKNKIGMLTEDRRGKGIVGVRNIYDNTVLSHLKA YGFPIAHKRILKDTDEYCTKLNVKTPNYKTQIQNLSGGNQQKVLVARLLLNDPDILIFDE PTRGVDVGAKVEIHSLITKLAAEGKGIILISSELPEVMGMADRIVVMHEGRITGVLNKDE FEQELIMRYATDWKDTVKQ >gi|224461045|gb|GG657759.1| GENE 2246 2358255 - 2358914 428 219 aa, chain + ## HITS:1 COG:YPO0859 KEGG:ns NR:ns ## COG: YPO0859 COG1172 # Protein_GI_number: 16121167 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 2 211 123 331 336 160 42.0 2e-39 MIVVGVLIGIFNGVLIAYFKLPPFIATLGTQLIVRAVAQIYTTAYPVPELRADFKLLGQG YLFGLFPVVVLIFIVFVIISGFMLTQTRFGKNVFAIGGNEQTARVAGIHVERNIIYVYAW SAVCAAVSGMLLAARSGAGNSSFGTNYELDAIAAATVGGTSHSGGVAKINGVIAGILILG IVKNAMLLVGISTYWQQIVKGIIIIVAVALDMYKNIRKS >gi|224461045|gb|GG657759.1| GENE 2247 2359398 - 2359757 89 119 aa, chain + ## HITS:1 COG:mll6643 KEGG:ns NR:ns ## COG: mll6643 COG1082 # Protein_GI_number: 13475545 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mesorhizobium loti # 6 116 70 178 180 84 43.0 3e-17 MDEIQRDNVGITIDFWHLWATGGTTPDEIALFDKKKMGNIHFCDGIRPENGEKWNENIQR GFLPGDGDIPLKEWAAAVKATGYDRPWSIELISTKYWQCDSYDVAKQLYEGMEKYVSDM >gi|224461045|gb|GG657759.1| GENE 2248 2359784 - 2360959 397 391 aa, chain + ## HITS:1 COG:TM0412 KEGG:ns NR:ns ## COG: TM0412 COG1063 # Protein_GI_number: 15643178 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Thermotoga maritima # 1 387 1 388 395 254 36.0 3e-67 MKALQASGTWRPRPGYSPDEREKKDNRASMGNNLFYQPSLEMVDIPKPEPKDDEVLIKVG GAAVCGSDTMFLGKDDEDYLQYCGHCKLPVVIGHEFSGEIVKTGKKVKNFKEGDLIVAET MNWCGECAACRAGLVNQCENLEEIGFTLDGGYAEYLVAKEKFCFHVEALVSVYKTKERAL EVAAMVEPTAVAYNGMFVRGGGFLPGGNVAIFGAGPIGLSATSLAKAAGAAKIITFEKEP LRMKLAREVGADYVFDPDELYSAGISPSEKVMDLTGGIGVEMAVEATHDQSETIPEIEQM IAVGGTIAQIGISPKRTPIMSTYLQKKGVNYHCSIGSSGHDIWPHVIRLIASGRIDPSRF LTKCYHLDEAKEAIEAAERLEGGKFVVTPNW >gi|224461045|gb|GG657759.1| GENE 2249 2360990 - 2361820 698 276 aa, chain + ## HITS:1 COG:no KEGG:Halsa_0172 NR:ns ## KEGG: Halsa_0172 # Name: not_defined # Def: xylose isomerase domain-containing protein TIM barrel # Organism: Halanaerobium_sapolanicus # Pathway: not_defined # 5 273 4 268 269 174 37.0 4e-42 MLKVKFGALDFALPGQMVGNIRLAHEIGLDGLELGFLRYQERGFMLGQKWFRDYYLEEGE KYNIAFPSMAVCEFDYYGLKHKVTTEKGRRVREIIDLAIDTAAYMKMEMVMMPSFNDGYI ETEEDMEVTAEALIYACKEAAKHNITIATENLLTLDKNLKLFQKVGQPNFSCLYDSQNYR VWKNWSQPGMLKQLAENNILYPEIHVKDGVGQSGSSAYLGEGDTDFRGTMEVLHDIDYTG WIHLENFYDRLPLCATGDTYIDVAKKDLAILKEACK >gi|224461045|gb|GG657759.1| GENE 2250 2361849 - 2362685 591 278 aa, chain + ## HITS:1 COG:no KEGG:Halsa_0172 NR:ns ## KEGG: Halsa_0172 # Name: not_defined # Def: xylose isomerase domain-containing protein TIM barrel # Organism: Halanaerobium_sapolanicus # Pathway: not_defined # 5 268 4 267 269 211 39.0 3e-53 MKKVKFGLCEWSSPIQGPYVCRFARELGLDGIELAQGDYEHSFPLSNPYIQDVYLKEAAN NEIELTAIAVNCLDYYAMTSSDDTSQKKVAVMAVKKAVETAKRMRLPIVQIPAFGKSYIH SEADFQAVADCLRSACKAAAKEGIVIASENALSAEEDLRLLREVGCPNLKIYMDTQNPYI NNGYSAPEMIYVLRDHICEVHVKDGREGELSAALLGEGATSYYESVKALCDIGYTGFVHL ENFYDQQPMNCCDKDAVELLRKDVAILKASFKSYNETV >gi|224461045|gb|GG657759.1| GENE 2251 2362734 - 2364227 188 497 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 266 468 40 240 329 77 26 4e-12 MKNITKCFGSITAIENIDFDIYAGEVHALMGENGAGKSTLMKILYGYYSRTSGEVTVSGR EVHFNSTHDAEAAGIGMVPQEIDLFPELTVTENLFVGRKRPRKRWGGFDFKKMQEEAEDV FHKLDVDIDVNAQVKHLSVAGCQMIEIARALIRQARVIIFDEPTASLTDKETERLFKVIG ELKEKEVGIVYISHRLEEIFRISDRITVLRDGKWVSSDEISAFDQDRLVKLMVGRPLSQL FVRGGSNIGKTVLCVEGISSGDKFKNVSFELHAGEVVGMAGLIGAGRSEIGQALFGILPL TSGRVKIHGESYEIRSPEDAMRKKIVYLPEERRSQGLILPMSIGDNISLASLSTLTKWGF IDYKRERKISEKYIHTLSIRGAAIEKPVSQLSGGNQQKVVVSKIMVREPDILILDEPTRG IDIGAKSEIYKLIDELAKAGKAILLISSELPEVLSMSDRILVMHEGQLTGEFTKEEATQE KIGLAASGVTDVGMERL >gi|224461045|gb|GG657759.1| GENE 2252 2364251 - 2365252 766 333 aa, chain + ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 37 321 30 317 322 154 38.0 2e-37 MENEKMIRVKGEERAAGSVIMKLLLRPSTPSIVFSVILIVVFSAAAGSFLSFDNIQAILI QTVVIGIMAIALNFVILLGEIDISVGSQLAVCAYVFGYVVSWSDSLALGLVAAMSAGGIL GLINGLLVAKLNLSSFIVTLATQNVLRGILLVYAGGGALNLTAEHRTLGIGTFLGINISV YVFLLVFIICAMLSRHTVWGRDVFAVGGNQRAAVMAGLPVINTYLKAYVLLGVCCGLTGG IFLCQIGQLQAAIANGYEMRVIAAVAIGGTSMAGGRGSALSPLVGSILIGIILNGMSVMA VPSTFESLVLGAIILLAVAVDAVRHKVVNKHYE >gi|224461045|gb|GG657759.1| GENE 2253 2365245 - 2366198 981 317 aa, chain + ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 4 310 15 318 322 181 39.0 2e-45 MNKFQTFIRKDSARICMLLLIIVVECIVFSSTGYFFTASNIFDALRASVEIGLAALGMTF VIMTTGIDLSVGSLLALVSVTIGFTYQAGCPFVLSLLLGLLVGIAGGAFNGALIVYGRLH PFVVTLGTFSFYRGIAYAATNAGAVSVFPDGYALAGRAYILGVVPVQVVVFVVLTILIWI LSKKTPFGTYVTAMGYNEEAARFSGVQIRKIKMLVYILIGFLVAAAAIIYTSRVSTARGN AAIGMELNVIAAVVLGGTDIKGGKGTIAGTFLGVVILAFLKNGLAMLSIRGDWALCVTGI VLLLGILLNRALEVRQE >gi|224461045|gb|GG657759.1| GENE 2254 2366274 - 2367299 1056 341 aa, chain + ## HITS:1 COG:mll5706 KEGG:ns NR:ns ## COG: mll5706 COG1879 # Protein_GI_number: 13474749 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 35 339 25 327 331 178 35.0 1e-44 MVLITALLLCGLAGCTTEKAGGASGDKKDEGKSQEKVTIGMCPKFTSDPYMVAAGEGAQE ACDELGYTLDFNGPVNADIAAQSDIIDQWTQKKYTAITISANDADALSPAMKAAQDAGIY TSAWDADVNADSRELFLNQVTFEGMGKTMVDMMVEEAGSSGDFLVVTAVLTAPNQNAWIE EMKKYMEANYPDMKIVDILAGDEDLAKSRDVTLNYLRSHPETKGVFAVTGMASPGVCEAI EQLDLVGKVAVTGLGVPSLIKDYLKKGTINQCCLWSPYDIGYGAMYLAKTQIDGKLDEAK EQGYIEAGRLGKLEFIDKDKGIVLLGDPLIFTKDNVDDYDF >gi|224461045|gb|GG657759.1| GENE 2255 2367333 - 2368484 1146 383 aa, chain + ## HITS:1 COG:BH0710 KEGG:ns NR:ns ## COG: BH0710 COG0673 # Protein_GI_number: 15613273 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 3 373 2 388 388 322 40.0 1e-87 MKETLNFALIGHMFMGRAHSHALNDVGMFMKDLKIRPVLKTICGIGDGLEDTKERFHWEK SETDWHKVMSDPEIDVVSIAVPGFLHKEIAVEAARNGKHILCEKPLARDYTEALAMFQAA NENNVLHMVNFNYRRIPAVALAKQMIEEGQLGEIVSYKGFYQQDWALSGAPMSWRYKSEM VGKGPLEMGIHITDMAQWLVGGITEVVSVMDTVVKERGTADGGTDVVTNDDNTVWLAKFE NGVMGIFEASRAHMGRKNFQWFEVNGTKGSLRFELERMNELNVYLSNDGEDRRGFRNIIV TEEMHKYIKNWWPAGHMLGWEHTVLHQYYEFLKAVEGEYMPRPSFEDGMKAQRVLDAVVR SAEEKRWVAIAEIKGREEPGIRR >gi|224461045|gb|GG657759.1| GENE 2256 2368489 - 2369496 1072 335 aa, chain + ## HITS:1 COG:BS_yfiH KEGG:ns NR:ns ## COG: BS_yfiH COG1082 # Protein_GI_number: 16077894 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Bacillus subtilis # 1 315 1 313 313 311 48.0 1e-84 MHLTLMTDSLGKLSFEEMLDTAAMLGIETLEIPTGGYSNAPHMDIDRLLESRQAREDYMR AIESRGLRLEVLNCNGNQLSPDPQGEKDARLVEKTFRLAQLLGVEKIAMMSGLPGGGPGA KYANWVTCCWPPVMLEMLEYQWNEAGIPYWENTVKLAEQCGIKKIALEVHPTQIVYNVPT LLKLRQAVGPMIGANLDPSHLFFMGMDPVEAAKALGRERAVYHVHAKDTHIERDVADLNG NHETAAYLSTPAYERSWTYCALGYGHDVFWWKRYLMTLLEFGYDGPLSLEIEDVVMPSVI ATAKSADLLKEAMPRDYTRDFPAHLLEIKGLGFDI >gi|224461045|gb|GG657759.1| GENE 2257 2369685 - 2370470 196 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163783284|ref|ZP_02178277.1| 50S ribosomal protein L16 [Hydrogenivirga sp. 128-5-R1-1] # 79 229 1 151 185 80 33 4e-13 MDIESLIRRKKELGITNQQLAQISGISLGTVNKIFSGATRSPQNDTMNALVSALGLDFYQ YRPGSRADVICEPSSAYQMDTNSGIYTLDDYDSLPVEVRAELIDGYLVFMEAPSVRHQEI IGELYYCIRHHIKKAKGSCKVILSPVDVQLDNDDRTVVQPDLLIVCDRGKSDGHRIHGAP DYVAEVVSAGSRKRDYLVKLNKYWTAGVREYWIIDPDGRKVTVYEFGEQEENFQMQTYTF QDKIPVSTCTGLVIDFSELDL >gi|224461045|gb|GG657759.1| GENE 2258 2370754 - 2371665 990 303 aa, chain + ## HITS:1 COG:TM0954 KEGG:ns NR:ns ## COG: TM0954 COG3959 # Protein_GI_number: 15644626 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Thermotoga maritima # 10 274 11 273 286 246 45.0 4e-65 MSKALQDFRQLRKKTEELRYNLTAMMACAGSGHPGGSLSVLEILTTLYYGGVMRYDAEDP GAKWRDRFVMSKGHASPALYVILADLGYFPGEKLKEFDADDSMLPKHCNRLKTPGIEAST GALGQGFSMALGMALAGHMDKKEHRVFCVLGDGECQSGEVWEAAMAAAKYGLDQFKVVID NNRLQIDGFTDDIMPLGDLKAKWEAFGWHAEVCGGHDLQALRKSFDNMDRVKGRPQVLIA DTVKGKGVSFMENEADWHSRKMTKAEGASALREISRAYEEFGGSIDDFILFLTPEELKKL KDA >gi|224461045|gb|GG657759.1| GENE 2259 2371678 - 2372634 1158 318 aa, chain + ## HITS:1 COG:MJ0679 KEGG:ns NR:ns ## COG: MJ0679 COG3958 # Protein_GI_number: 15668860 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Methanococcus jannaschii # 17 312 15 309 316 236 44.0 5e-62 MNEAVQKERSLISKEIFGKVITALGKEKENIVVCDTDLMRCFGTKAFSEQFPSRHINFGI AEQNCMAAAAGLALSGKNVFASSFANFASKRACDQVSIAVAYNRANVKVCGLYAGLTAEK NGGTHIGVEDVALMRSIPDLCVIEPADTYELEAVTRFLAEYEGPVYFRQPKMYIRSVYEE VPDFELGKGVTLRGGSDAAVIACGITAGIAVDAAQLLQKEGIDVRVINMPTIKPLDEEII QEAAVQTGRIVTCENHSVIGGLGSAAAEVLAGMKEKAVLHRMGIQDTFGVTASLDYQLKK NGLTAENIAAEIKGMLAD >gi|224461045|gb|GG657759.1| GENE 2260 2372670 - 2373770 1254 366 aa, chain + ## HITS:1 COG:BS_gutB KEGG:ns NR:ns ## COG: BS_gutB COG1063 # Protein_GI_number: 16077682 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Bacillus subtilis # 6 352 12 352 353 162 32.0 9e-40 MKSLDAFMYGPKDLRLEEITVPELKSTQILVKVHASGICGSDVECYLGHSKEGRYDLGAY TPGHEWCGEVTAVGSDVISLKVGDRVTGECANSCNRCDICKEGINNSYCTNWNEVGFMPS APGGMGEYLVGEEQFCYKIPDNMTYVEGALVEPCSVAYYSIYGRDGYVARTDDCVIFGAG AIGLFAATICKAAGAKVIVVEPIEFRRKMAEEVVGADVTINPFEEDVEKKVLEHTDGKGA SFVVECTGSDAGVSTTVDVARPHARIRFIGHSIGRKIPIEIGKAIWKGLNLQGSAGQPWF FTKTIKFMGRVKEEIDFTKFITAYYPLEEIQDAFDRAIEHKDEAVKVMILANEEKEKLEE LRKGTR >gi|224461045|gb|GG657759.1| GENE 2261 2373789 - 2373896 104 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADYGSSIWLTTEHPAISFRKYEGRTVKEENMGYE >gi|224461045|gb|GG657759.1| GENE 2262 2373889 - 2374908 1047 339 aa, chain + ## HITS:1 COG:TM0413 KEGG:ns NR:ns ## COG: TM0413 COG1402 # Protein_GI_number: 15643179 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Thermotoga maritima # 28 331 8 304 311 226 40.0 4e-59 MNEEEVDELLKERYEIPAPSEIGVADTYIQTTPRWKVVEKRKKNDVVLVPVGCTECHGMH TVSALDTFQCQSIVEGVRRATAKDGREVSLAYNPLPYGAHPYHHLGMPGTVMVPQRVAVE VLVATMLGLWNDGFRKQIYINNHGQLWVLETALHEFLYRYQLPCIIQVMDWHRAIREFFY PGAKEDMVKTPFVHADECETSVGMLCFPEGMVDLSHADETHPKSYFEPGRFDNSTDSFHR PQRWSETEMTSPITYKGTPEGVVGSPAIAEARKAKRPILAACEYLTFCVDEILDAFPPGT VPPTEEVTHRTDEEMEAYLKEPGSEGWRSVYGLPRVGME >gi|224461045|gb|GG657759.1| GENE 2263 2374937 - 2376130 1569 397 aa, chain + ## HITS:1 COG:PA0446 KEGG:ns NR:ns ## COG: PA0446 COG1804 # Protein_GI_number: 15595643 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Pseudomonas aeruginosa # 5 397 3 407 407 312 41.0 7e-85 MKTKGALEGIRILDLSRVLAGPFCTMMLADLGAEVIKIEIPGKGDDSRSFGPFVNGESGY YMNVNRNKAGVTLNLKKPEGRELFLKMVEKADIVVENYRPGVMEKLGLGYDVLKETNPKI IYGAVSGFGHYGPYTQRPGYDVIGQASCGLMSVTGWPDGGPTRVGTAMADSLAGYSLAIG ILAALQYRSSTGVGQKVDIGMMDAGIASMQIIYPIYTMGGRLPERIGNRYESNYPTDTFE TKDGMMVIGAANDKLWAKLCEVMGKPELAADKRYDSNPKRVEHYMEIRPVIQEWTRNYTT KDAMELLLEHGVPASPINDLAQVTEDPHARAREMFVHVKHPVAGDTVLNGSQFKMTETDP LIERPAPLLGQHNEEVYGELLGLSAGQIAQLEEQGIM >gi|224461045|gb|GG657759.1| GENE 2264 2376142 - 2377044 976 300 aa, chain + ## HITS:1 COG:BS_yngG KEGG:ns NR:ns ## COG: BS_yngG COG0119 # Protein_GI_number: 16078884 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Bacillus subtilis # 1 296 1 297 299 236 42.0 5e-62 MRLPEKVTIIEVGPRDGFQNVKDFIATEDKKRIIDSLVSAGIQNMEITSFVHPKAILQMA DAMELAMSVTYTEERLRKIALVPNARGAQSAVACKVGEVSYVISASEAHNKANVNRTIEE SEAELRKIRETEPALKVRLDIATAFGCPYAGKIGKEQIYRLIGTGIQEGIEEIVLCDTIG IANPRQTAMLAADVRQRYPDTRFTFHLHNTRGLGLANILAAMQEGIDSFETSVGGLGGCP FAPGAAGNVATEDLVNMLDHMEVSHGICQEKLLEAAAYVRQTVHAELTGNMLDACKYENI >gi|224461045|gb|GG657759.1| GENE 2265 2377155 - 2378573 354 472 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 50 409 80 430 477 140 30 2e-31 MSENRNEQEYVKELVARARKAQAVADTYTQEQVDRLTRAVGWALVQEETVEKIAKFCLEE TRMGTYEAKLNKLYKKVRGVMSDINPQKSVGVVEEDKELGIRRIAKPVGVIGSLIPTTQP ELCPATQGILAVKSRNAIIFSPHPRSQRTTCLVAEVIRSVLKRYGAPEDLVICAERPTME MSREIMAQTDLVIATGGAGMVKAAYSSGTPAYGVGVGNAVVVIDETADLKEAAHNVHISK VFDYASGCSCENSIVVQEGIYDEFIGCLKAEGAYLVTGEEKPKLQKALWPQFPENHVLNR DIVTQPAKRIAEIARIDAVPDDCEFLLVEETGRGETYPFSGEKLSVVLAVYKYREFDEAV QIVNEIHAYQGAGHSCGIQSNDEEHILTLALNTKTTRVMVRQPQSVGNGGDWNNGMPFTG SLGCGTWGGNIVSENITLKHFLNNTWLSVPIKGTVPDDEELFGDAMREKVQG >gi|224461045|gb|GG657759.1| GENE 2266 2378604 - 2379749 1139 381 aa, chain + ## HITS:1 COG:BS_yraM KEGG:ns NR:ns ## COG: BS_yraM COG2828 # Protein_GI_number: 16079741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 10 377 7 359 367 268 43.0 2e-71 MEGRKSLRCSIVRGGTSKGIFIRENELPPDPEQKDEVIRAVFGSPDIRQIDGLGGADVLT SKLAVIGPPSRDDADVDYTFAQVSFETDKVDYSGNCGNISSAVGPFAIDEGMVRADGGVT AVRIHMKNTGKILTAYVPTEGGKARSAGDFRIDGVPGTGAKIRLDWSDAAGGLTGKLLPT GNARDVISADGKSYEATLIDAGNPVVFVKADALGMKGTECPYEIEHNASLMRTIEKIRGQ AAVMFGLCGSPEEAAAKSPYNPFFAIVSEPQDYAGPGGVKVGRDEIDLTSRLLFMLKMHK AYPITGTVATGAALRIPGSVVWDVLREEAKTRTEVYIGHPSGRIPVESEVTADGGRIELK KACVYRTARRIMDGIVYLPER >gi|224461045|gb|GG657759.1| GENE 2267 2379782 - 2381035 1271 417 aa, chain + ## HITS:1 COG:MK1440 KEGG:ns NR:ns ## COG: MK1440 COG0065 # Protein_GI_number: 20094876 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Methanopyrus kandleri AV19 # 1 397 1 396 418 359 46.0 5e-99 MGKTIAEKIIARAAKEPEVRPGDIVWADVDRAMMDDILGPRIQIAEQLKELGKPVWNPDK VVIISDHYTPPASIHQAEIVKFTREWAADNGIQKYYEFEGPCHQVMAETGNVRPGMVVLG TDSHTCMGGALNAFASGVGSTEMLGILVTGKTWLKVPETVRVLWEGELSANVMAKDISLR TIGTVGHAGATYMSVEYDGQTIRGLPVDERMAITNMAVEMGAKAGLMPFDDITEAYLDSI GVKDYEPYQSDADASFYRTYQFRAEELRPQVACPHEVDRVTEADNVRDVKIQQAYLGSCT GGRLHDLKTAAAYLKGKKVAPGVRLLISPASRSIWREAGRLGYLDILAEAGGVIMAPTCG VCVGLHSGLIAAGETCISSSNRNFLGRMGSKEGQIYLGSPLTVAASAAAGCIRAAEE >gi|224461045|gb|GG657759.1| GENE 2268 2381050 - 2381526 565 158 aa, chain + ## HITS:1 COG:MJ1277 KEGG:ns NR:ns ## COG: MJ1277 COG0066 # Protein_GI_number: 15669463 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Methanococcus jannaschii # 1 157 4 162 168 167 53.0 9e-42 MTEGNALKYGNNINTDIISPPQYMELPVEEAARYAMSAVDPDFYRKVRKGDIFVAGSNLG SGSSRETSPLTLKYLGVSVVAAKSFARIFYRNLINVGIPAIECRDTDKIREGDRLRVDVK EGYIYNLTRSERYKCQKLPEHLMKIIEAGGLFQYLKEV >gi|224461045|gb|GG657759.1| GENE 2269 2381531 - 2382223 1034 230 aa, chain + ## HITS:1 COG:CAC2565 KEGG:ns NR:ns ## COG: CAC2565 COG0822 # Protein_GI_number: 15895825 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 230 1 230 230 300 64.0 1e-81 MNYTKELLGKCCVTCGADEGVSPIPQEGEFIRARQITDISGFSHGVGTCGLKQGACKLSL NIKEGVIEEALVEVLGCTGMTHSAAMASEILPGKTILEALNTDLVCDAINVAMREIFLAL VYGRTQTSYSEGGLDVGAALEDLGRGLKSQVGTAYATQLKGPRYLEMTEGYVTKMALDEA REIIGYEYVNIGQMMEDIRQGAQADKALRDATGTSGRYGEAAEYIDPRKE >gi|224461045|gb|GG657759.1| GENE 2270 2382233 - 2383234 938 333 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2793 NR:ns ## KEGG: CLL_A2793 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 333 1 333 333 411 62.0 1e-113 MVKFQNMDKKMGQIEAFLKRYGMDSLDEAGEVCLSCGMDVPAIVREIQPICFDDACWAYT AGTAAALSSGTAEAREAALIMGEALQAFCVKGSVADERQVGTGHGRLAAMVLSEEVRCFA FLAGHESFAAAEGAIGIVQSADKVRKTPLKVILNGLGKDAARMISRMNGFTYVKTRFDYK TDELAILEEKSYSGGGRARIRCYGADDVREGVAVMERENVDVSISGNGTNMVRFTHLVAG AYKKRCLERNKTYFACASGGGIGRTLGPDETSAGPASYGLTDSMSRMYGDTTFAGSSSVP AHVAMMGFVGMGNNPMVGATVRLAVAVQESRDK >gi|224461045|gb|GG657759.1| GENE 2271 2383256 - 2383744 424 162 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570214|ref|ZP_03779239.1| ## NR: gi|225570214|ref|ZP_03779239.1| hypothetical protein CLOHYLEM_06310 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06310 [Clostridium hylemonae DSM 15053] # 1 162 1 162 162 322 100.0 5e-87 MDYKIFEQLDGPLYGRRDMEDGQNYMERIMRAAFLGGAKEGEERIYEKMQGTFAGCDFRG KALEMEFYVQEWELNPMLSMHGGLLTTAVDMTCGILVRFYKQSVSAATVHLSMDFLKPLR CGEAFTVRARINKQGRRIIFLTAEVVLADSGQTAATASGTFV >gi|224461045|gb|GG657759.1| GENE 2272 2383798 - 2385843 1617 681 aa, chain + ## HITS:1 COG:CAC3371_1 KEGG:ns NR:ns ## COG: CAC3371_1 COG1902 # Protein_GI_number: 15896613 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 4 368 2 392 401 238 35.0 3e-62 MKQNMFKNLMSPVQIKTMQVKNRIVFPPMNTNLSSEDGCVTPQMEEYYVRRAKGGAGLII LEAAGIAPDTRNHPRQPMICDRKYTASWARLVERLHRYGAKVSVELVHYGSEASIPPRVS PSGISKYKDAPGRILSVEEIHRIQEQFAAAALYAKQAGMDAITLHGCHGYLIAEFLSPVF NHRKDEYGGDFTNRCRFLLEIIDKCRKALGPKFPIMVRYSADEFVEGGRDLEESVTLAKV LEKNGVDAIDLSASQPSAYLMTTPPYCLPQAKGMLVPYSESVRRAVDIPVFTAIGIRDPE YAEQIIAEGKADLIALGRPQLADPDYACKVQSGRPETIRHCLSCEYCLDTLDDDRQICCA VNPETGREIEFSGRNATCSGRPSERTGLNEGAGVKRVVVAGGGPAGLEAARAAALKGHEV ILFEKRPQLGGTLNAAKVPPHKEMIGRLIDWYCRELAELGVEVRLGTEAAEEMVDGLKPD VLFLACGSHYIKRIKGSDLTNVISAYDALTDPDSVGENVVIVGGGASGAEAAEYFSGQLV EVVCHGAESLGGKLKFEARERPGAAPGHKITVVEMLDSICSDMDVFCKETVLYTLEKNGV RLCPSCRVEEITDTEVRIFNLKVEKEEVLKADTVILAGGLKPNGQEAFSDKSYPVVRIGD AVQAGKIKDAVYSAYVQADLI >gi|224461045|gb|GG657759.1| GENE 2273 2385803 - 2387101 1248 432 aa, chain + ## HITS:1 COG:CC1133 KEGG:ns NR:ns ## COG: CC1133 COG0738 # Protein_GI_number: 16125385 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Caulobacter vibrioides # 42 403 5 367 411 79 22.0 1e-14 MLSIVRMYRRILYSICLKLQYPGGPTGTIKGAYPGFERGMDMKDTKKNTLKITAALYVLM FVYAVFTTMTGTQLLILVREFGLDLAEGGIFAVIINTGCIGGIVLSAFFIDRFDSRRLVL LSYFLLGLLLIAIKFSGSYYSFLILLLWIGVSMKFLDASLNASISRLNTANSGFYMNLLH CSFGIGAFAGPLFTTVLMENGTAWRDTYFYLGIVCIVTGLVYYAVQKGYATEPVTDCGGK EKSGGGHVICLRVFCLMGILLFYCGHQMGINSWMPAYMQETLHLPPAASNLSVSAFWVGL IVSRLVSAVLTRYTSEERILKAGLLAGTVFLAVGVMSRLPAATVIGVTGAGLFSGACIPL VLTIGYSAFPSALGKISTLLFLCIAGGAVIFPWLMGISSRSFGLFGAMMLDTLCLAAAAA AALILLSKTKIK >gi|224461045|gb|GG657759.1| GENE 2274 2387303 - 2389225 1609 640 aa, chain + ## HITS:1 COG:CAC0318 KEGG:ns NR:ns ## COG: CAC0318 COG0845 # Protein_GI_number: 15893610 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Clostridium acetobutylicum # 320 592 89 363 392 66 26.0 2e-10 MENQAKKCSLHVHVKELGRKFNRAGKKKSFWITAVIITVLIIAMVVGLIVRAKGKSSQAA EMTVQSATAEKGSISTTVAGTGTLGNGTTTDVVVPTGIKVKEVLVESGDTVEEGQTLATL DEASIAGELLEVKESKASVQEQIDSLSSDGEDFSTTEYLEAKVLYGQMEELEAAQSALNT LLETKAVTASCAGTVDSVNVSADTEITQSSASEAGGNSGGSENGNVSSASAGTSAMSGTG SNSEIILLSAADGISAVQNISDCSLTVEAPETGQKPQSDIKETAEYAGTITWNCATSVYQ PDTVYTATIKLTAKSGYEFSANIIPEVKGADVTSEVRKSDSGDSILQIKARFAKTAAAQG TDDTKKDSQNNASSSAGSAGGAESKSSGTAAGASSGNAVGSESAGAGNGTSGDGSTSGSD AGTSGSSEYSAYETAAFTIASGDNVTVSINVDELDILSVEEGQPASVVLDALDGQEFEGT ITKVALTASSGSSSAKYPVEITVDKTEDMMLGMSASATIHIEESENAVLIPVSALQEKGN STFVYTGKDEDGNLTDAAEVETGLSNGSQVEIVSGLSEGDTVYYLKAGSTGTAESGGMMN GQDGMMQDGGNMPGGGQMQDGEKPDMGSMPQGGPGNRSEQ >gi|224461045|gb|GG657759.1| GENE 2275 2389237 - 2389908 329 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 220 1 219 245 131 35 2e-28 MITFHEVSKIYHIGETEVRALDRASMQIEEGEFVSIAGPSGSGKSTMMNIIGCLDMADEG TYTLDGQAIEEYTESELARIRNKKIGFIFQSFHLIGNMTAAENIELPLIYQRIAKTERRE RVEEALSKVRLEGRGRHRPNELSGGQQQRVAIARAIAARPSLFLADEPTGNLDSKTGEGI MELFHELHEQGSTIVLITHDDSVARQAERSIHILDGRVKEVKV >gi|224461045|gb|GG657759.1| GENE 2276 2389902 - 2391086 371 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 1 392 3 412 413 147 28 2e-33 SMILQAVKMAWKSIASNKMRSFLTMLGIIIGVMSLVVLVSLVSGTTESVEDQISSIGNNM LTVTVQDDKGRPLKLSEVTALAENEEIESAAPVAQSSVTAASAYSEENAALYGTTGAYYD IQGLELYAGRFIKNTDIENHTNVAVINAGLAREVMGRMDVAGETVKLNGTEYQIIGVLAA KDSDSSTTENYEAYIPYTSLIRMADDVSSDVTTFCASAASEETLDKAESVLNDTLMERFG QDEDAFTVINQSTVMEAMQNVTNTLALLLGGIAAISLLVGGIGIMNIMLVSVTERTREIG IRKAVGAGKGTIMLQFLVEALMISLMGCAVGIFLSWITLRVISGVGGEDMNYSLRLGVVW ISIAFSMGLGIIFGIYPADKAARKQPIEALRYVG >gi|224461045|gb|GG657759.1| GENE 2277 2391175 - 2391966 366 263 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570221|ref|ZP_03779246.1| ## NR: gi|225570221|ref|ZP_03779246.1| hypothetical protein CLOHYLEM_06317 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06317 [Clostridium hylemonae DSM 15053] # 1 263 11 273 273 514 100.0 1e-144 MYRYDSKKQRTSQPIQRLKTYTIQDFTVSAAVPHTVTPLDANLMTNAQNIDARKRVRPRD AAFAPKNIGFIPSKGSAAVHAGIQNLQGIAPAESLILVSHGEPPESAVLEGEFGGYRAGE LALLLQFNNILPANYSGEIYLDGCDTGQRFQNQQGTSYIEHFKQELQAAYAAANVNLGNF TVKGNIGEAVTTAAGRERIDISAVNMDQFNDRARELLRNDAGNHYHGKYGVAASGHVTGT HLRWTDAGGTRGQVLGKAGKLVV >gi|224461045|gb|GG657759.1| GENE 2278 2392043 - 2392534 638 163 aa, chain - ## HITS:1 COG:PA1841 KEGG:ns NR:ns ## COG: PA1841 COG3760 # Protein_GI_number: 15597038 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 17 151 19 153 165 113 43.0 2e-25 MENQKQRVYDALNKLNIKYEVVEHEPVHTMEDMDRLGLPAKGTLCKNLFLRDAKGKRHFL VTCDEKKTVDLKSLGRALGAGNLSFASEERLEQYLGLKQGSVSPFGLMNDTDHAVEFFID KDLGRCKSLGIHPLENTATVFLSFKDLDKFLWDLDVDVMKIKL >gi|224461045|gb|GG657759.1| GENE 2279 2392551 - 2393105 711 184 aa, chain - ## HITS:1 COG:BH2909 KEGG:ns NR:ns ## COG: BH2909 COG1396 # Protein_GI_number: 15615472 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 2 168 4 169 189 103 34.0 1e-22 MEDLNQLIADNLKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLK VPVTAFTAPKPTPFSQTSKAEVSPLVSDDGRYRLYPVFSFRDGQDFEIFDFEFDEGGQMA GNRQMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIVV HYPN >gi|224461045|gb|GG657759.1| GENE 2280 2393277 - 2394044 690 255 aa, chain + ## HITS:1 COG:BH1553 KEGG:ns NR:ns ## COG: BH1553 COG1349 # Protein_GI_number: 15614116 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 1 255 1 249 251 134 33.0 1e-31 MKVSERLEIIIEEVQEKGQVKVADLSGRLGCSEVTIRNDIRRLDQQGVLKKTYGGAVRKE EGLSVQFNPGEFYLNSREKHRIAVRAYEYIGNKESIIIDDSTTGCYLAKHIKEHEEKQMT VVTNSLYCAAELSSARHVELFMVGGYVMANPPSALDNITAGGVKQFHVDKAFVGVNGINL NIGLTSMGAPQMEVKREMIRAADETYVIADSSKFGSGNLFTVCTMDDVSRIITDDGVSKE KVALARKLNIEMDLV >gi|224461045|gb|GG657759.1| GENE 2281 2394049 - 2394300 265 83 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_3072 NR:ns ## KEGG: CDR20291_3072 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 83 1 83 83 105 63.0 9e-22 MYTTNELLSNLDKLHTTDLGAVRIKKNLSLDTDEVIEWCKLSIKQPDASVTRSGKNWYVR VNGCILTIHAHSYTVITAHKIKK >gi|224461045|gb|GG657759.1| GENE 2282 2394643 - 2395251 0 202 aa, chain + ## HITS:1 COG:MA1000 KEGG:ns NR:ns ## COG: MA1000 COG2020 # Protein_GI_number: 20089876 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative protein-S-isoprenylcysteine methyltransferase # Organism: Methanosarcina acetivorans str.C2A # 77 202 78 202 202 65 32.0 8e-11 MGDPTKFSNLITYYIFNLGFVILILSELFIFIYTYQKKEKKGFDTDKGTKWLLYINSFFC IFISLILVSKQVPSDIKDTMFPPIFSFIGICIIYIGIVIRVGAVLSLKRNFTLDVQTKNS QQLIKTGLYKYIRHPAYTGSILSLLGISLAFKNIYATIFVFISCMICYHIRIRIEEKVLL NHFKEEYCNYKRHTKKLFPKIY >gi|224461045|gb|GG657759.1| GENE 2283 2395976 - 2396563 161 195 aa, chain + ## HITS:1 COG:SPy1834 KEGG:ns NR:ns ## COG: SPy1834 COG1396 # Protein_GI_number: 15675661 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 189 1 189 195 132 38.0 4e-31 MDIGLRIKKLREQQKISQEELALKIFVSRQTVSNWETNKSCPDVKSLIILSNVFNVSLDS FIKEDIKEMREIVEKAAIKKFNMMSVVFLAELTAITVSAYPLAIIDGYAGIVIWLCLFAV TLYTAGKIESFKKKHDIQTYKEILAFIDGKQLTHDEAQQEIGKRNYQKIILALLASIIAL VVGLIVIFVCQHLLF >gi|224461045|gb|GG657759.1| GENE 2284 2396579 - 2396716 185 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGLEFWIIMIALIAMGGSCSLAGTWWERKKKEKEKEEKKEQNITF >gi|224461045|gb|GG657759.1| GENE 2285 2397034 - 2398053 464 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 1 329 1 325 346 183 33 4e-44 MNQKFKPVIGITIGDPAGIGPEIIIKALKEKALYEICRPLVIGSVNVLERAGTAIGESGL RLAAVERPEDAQYRHGVINVLETGNYDITELEWGKEQRLAGQIAIDAVDKSIELAMAGRI DAVTTAPINKVAIKMVGVSQAGHTELYQDGTKAPYVLTMFDCFKMRVFHLSRHISLRAAI DYVTKEHVLNDIERMDTELKKLGLNRPLIAVAGLNPHCGEGGLFGDEELKYICPAIEEAV EEGINVAGPIPPDTLFCRGKKGEFDAILALYHDQGHMPCKTLDLERSVSVTLGLPFIRCS VDHGTAFDIAGKGIAANTSMDAAIRTTVKYAVAKHNAKK >gi|224461045|gb|GG657759.1| GENE 2286 2398066 - 2399412 1317 448 aa, chain + ## HITS:1 COG:FN0227 KEGG:ns NR:ns ## COG: FN0227 COG3395 # Protein_GI_number: 19703572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 7 432 7 411 425 131 26.0 3e-30 MAVIGAVTDDFTGTASAGVLVARSQAKTGLFFDADAVKNFKDSERLDAVYVSSNSRHMPP REAYRAVKEVTEELKQMGIRYYSKKIDTTLRGGIGYEIDAMLDCLGPDTTAVMVTAMPQS RRVCVGGFSIIDGVILTETPVAKDVKTPVRECYVPELIRGQSKNQVDFICLRDVLSGVDS LKKKLAASKEQKNRIIIVDAITMDHLDIIAKACVQLGWNILAVDPGAFTMKLAYHRGVIG EEKPALSDGAEPDGTKTALFIVGSANPATEKQIDVLCAHGSEYKKVSVSPLSLLEGGSDA EKETGRAVCEVTGLLEQQNRTRAVIVETALHGTVVNLEEEDRKRGYRPGTSSALINRGLA EITKRVLEYAGKERIAGLLLTGGDTMESVCRTIGVECIQALDNIVAQVDVGRIMGAYEGL PIVVKGGFCGYEDIGIDIVERLLLEASK >gi|224461045|gb|GG657759.1| GENE 2287 2399428 - 2400393 1150 321 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_2840 NR:ns ## KEGG: CDR20291_2840 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: C.difficile_R20291 # Pathway: not_defined # 1 314 1 314 324 358 66.0 2e-97 MILNFLKKVPAGMMVIPLLLGSLINTLFPDALQIGGLTTALFSSAGTSTLLGAQLFCMGT ALQVKDMPKVLKRGGVLLLAKFAVGALLGIIIGKIWGMEGVFGLTTLAVISAVTNSNGSV YLTLMGNYGDQADCGCFPLLALNDGPFFTLVALGASGLANIPFMSLLAAIIPIVLGMLIG NIDKGMRELFAPMGTAIIPLIGFALGAGIDLTSIIKGGFPGILLGLITVFVGGGFILVFD KFISRRPGYAAWAVATTAGNAVAVPAAVALIDTSWEPYVATATVQVAASVVVTCIVTPFI TSWWAKRFGCPKMPLPGQKFD >gi|224461045|gb|GG657759.1| GENE 2288 2400413 - 2400805 141 130 aa, chain - ## HITS:1 COG:no KEGG:Rumal_1830 NR:ns ## KEGG: Rumal_1830 # Name: not_defined # Def: GCN5-like N-acetyltransferase # Organism: R.albus # Pathway: not_defined # 2 102 20 120 154 114 54.0 1e-24 MNIKQEIYPHYSPKGAVEYFLAHHNEANIIKDIKENQVFLCFDLKRNAVGTVTIRENEIC RLFVLPSRQGNGYGTELLDHAEKIISHQYSKIILSSSLPAKKYINTDVYSNSRDLKLSRL FIFCESTICN >gi|224461045|gb|GG657759.1| GENE 2289 2400826 - 2401392 585 188 aa, chain - ## HITS:1 COG:CAC2928 KEGG:ns NR:ns ## COG: CAC2928 COG3859 # Protein_GI_number: 15896181 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 16 187 43 210 210 114 43.0 8e-26 MSKSSVKTSTSSGAVTKKLVFSAVGIALAMVTSYIKVWEMPMGGSVTLLSMLFICLIGYW YGPKYGILTGVAYGILQFVVDPYMLSIQQVVLDYPLAFGALGLSGFFSERKYGLQAGYIV GVIGRFICSLLSGVIFFASYAPEGMNPWAYSALYQGSYLGAEAVITLVIVSLPPVTKALK YVKTQTNV >gi|224461045|gb|GG657759.1| GENE 2290 2401675 - 2402616 1075 313 aa, chain + ## HITS:1 COG:BH0560 KEGG:ns NR:ns ## COG: BH0560 COG1266 # Protein_GI_number: 15613123 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Bacillus halodurans # 82 256 33 210 237 65 27.0 1e-10 MEQQQNVTPPVPPESGGKRFMHLWGPLLIKWGIAFATMMAGAMVCSFLYMSAHYDTAMKA MENQDQMMNLYNAILEELMKWQTVIEGAAAFITIPVMIVLFHRDRVRERVSGILPNKKAP VWKYGAVLVMSVAMCWGLNNLIAISGVSALSSSYEETMEVLYTPPLLIQIICLGVLIPVC EELVFRGLMFKRLRARGGYMQAAIYSSVVFSILHVNLVQMIYSFVLGMMLAYIYEKYGSI KAPAAAHVVMNIFSVLATKYELLEWLSADIMRIGIVTVVCAAVAATMFVFIQRIEERPDY PNKPGENENLAAV >gi|224461045|gb|GG657759.1| GENE 2291 2402780 - 2404030 947 416 aa, chain - ## HITS:1 COG:TM0402 KEGG:ns NR:ns ## COG: TM0402 COG0004 # Protein_GI_number: 15643168 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Thermotoga maritima # 18 412 28 429 435 371 53.0 1e-102 MDLATLMENGMDTAQASGLLLNVMWTMVGAVLVYFMQAGFAMCEAGFTRAKNSGNILMKN MLDFVLGSLFFFIFGFAIMHGTDWNGIIGIKGFFNPASLADADGMINGLPVGVFMIFHTV FCATAATIVSGSMAERTKFAAYLAYSAAISIIIYPVSGHWIWGGGFLSQMGFHDFAGSTA VHMVGGLCALVGAKILGPRIGKYTKDGKARAIPGHNLPIAALGVFILWFCWFGFNCGSTT AASTSLGDIAMTTNLAAAAATLMAMCVTWLRYGKPDVSMTFNGALAGLVAITAGCDVVSS WEAIIIGLVAGLVVVFSIEIFDQKIKIDDPVGAVSVHGICGALGTILTGVFGEGCSLGTQ ITGVASVAAYVLVMAFVIFTIINKTIGLRVSREEETEGLDVHEHGSSAYADFNFRL >gi|224461045|gb|GG657759.1| GENE 2292 2404067 - 2404405 428 112 aa, chain - ## HITS:1 COG:NMA0447 KEGG:ns NR:ns ## COG: NMA0447 COG0347 # Protein_GI_number: 15793450 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Neisseria meningitidis Z2491 # 1 112 1 112 112 113 50.0 1e-25 MKKLEIIIQPEKLEDLKAILDENNVNGLMISNIMGYGNQKGHKKVYRGAEYNVNLLPKVK VETVVEADAAQELINIIIDEIRTGTYGDGKIFMYEVEDAVRIRTGERGSDAL >gi|224461045|gb|GG657759.1| GENE 2293 2404750 - 2409285 4172 1511 aa, chain + ## HITS:1 COG:sll1502_2 KEGG:ns NR:ns ## COG: sll1502_2 COG0069 # Protein_GI_number: 16329610 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Synechocystis # 389 1181 1 801 801 951 59.0 0 MDKQIEQRQYGLYRPEFEHDNCGIGAVVDIKGRKSHETVADALKIVENLEHRAGKDAEGK TGDGVGILLQISHKFFSRVCKPLGIFLRSERDYGVGMFFFPQDELKRNQAKNIFEVIVQK EGMKFLGWREVPVKEEVLGTRARACMPCIMQAFIERPDRTEKGIDFDRRLYVVRRVFEQS SDDTYVASLSSRTIAYKGMFLVGQLRSFFTDLQCPDYESAIALVHSRFSTNTNPSWERAH PNRFIVHNGEINTIRGNVDKMRAREENMESECLKGELHKVLPAVSSAGSDSAMLDNAVEF MVMSGMELPLAVMISIPEPWANTKDISRKKRDFYQYYATMMEPWDGPASILFSDGDCMGA VLDRNGLRPSRYYITSDDRLILSSEVGVLGIEPSGIVLKERLHPGKMLLVDTAAGKLIDD EELKEMYAGRQPYGEWLDSNLIKLKDLKIPNEKVPSYTGEECKKLQKAFGYSYEEVKTSI LNMARNGIEQTAAMGADIPLAVLSGRHQNLFAYFKQLFAQVTNPPIDAIREEIVTSTTVY IGRDGNLLKESAQNCRMLKVNNPILTNTDLLKIKNIKADGFKAAEIPIVYYKNSGLEKAI DYLFIEVDRAIREGANILVLSDRGVDEYHVAMPSLLAVSGLQQHLVRTKKRTSVAIIVET GEPREVHHFAALLGYGACAVNPYLAHETIRQLIDTDMLQKDYYAAVDDYNEAVIHGIVKI ASKMGISTIQSYQGAKIFEALGLKEDFIRQYFTDTVSRIGGIGMEEIAGDYMARHSEAFD PLGLEAELTLDSIGQHKARSGGERHLYNPRTIHLLQQSTRRGDYELFREYAKLINKEQEA VSLRGQLAFNYPEKGIPIEEVESIEDIVKRFKTGAMSYGSISKEAHETLAEAMNELHGKS NSGEGGEETERLSGSRCSAIKQVASGRFGVTSRYLVSAQEIQIKMAQGAKPGEGGHLPGT KVYPWIAKTRHSTPGVSLISPPPHHDIYSIEDLAQLIYDCKNANKDARISVKLVSEAGVG TVAAGVAKAGAGLILISGYDGGTGAAPGSSIHNAGLPWELGLAETHQTLIQNGLRERVRL ETDGKLMSGRDVAVAAILGAEEFGFATAPLVTLGCVMMRVCDLDTCPVGVATQNPKLRRR FTGKPEYVVNFMCFIAENLREYMARLGVRTIDELVGRTDLLKTREVPVSDRAAKLDLKQI LYNPYGKEPVPAIYDPKKKYDFQLEKTLDEKVLVKELLPALEKGHKKSIKVDVSNTDRTF GTMFGSEITRRYPDGLPEDTFIVKCRGAGGQSFGAFIPSGLTLELTGDTNDYFGKGLSGG KLSVMPPEDVKYRHDENIIAGNVALYGATGGKAFIGGVAGERFAVRNSGATAVVEGVGDH GCEYMTGGRVAVLGRTGRNFAAGMSGGVAYVLDMDNDLYKKVNKQLVNIEHVTSKYDVAQ LKQMIEEHTACTGSVTGKAILQDFTEYLPRFKKIIPADYEMMMTAILQMEEQGMGSEEAK IEAFYAIRGGR >gi|224461045|gb|GG657759.1| GENE 2294 2409298 - 2410797 1224 499 aa, chain + ## HITS:1 COG:sll1027 KEGG:ns NR:ns ## COG: sll1027 COG0493 # Protein_GI_number: 16329369 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Synechocystis # 1 496 1 493 494 530 53.0 1e-150 MGKATGFMEYDRQDKEAEAPKSRIRHYNEFYTPLPREEQERQGARCMSCGVPFCQSGEQI MGMASGCPLHNLIPEWNDLIYRGNWEEAYYRLKKTNNFPEFTSRVCPSLCEAACTCSLNG DAVTAKANEYGIIENAYKMGYASARQVRVRTGKKIAVIGSGPSGLAAADLLNRRGHSVTV FEREDKAGGLLRYGIPNMKLEKQVIDRKLSIMEEEGIAFVTGCNVGKDRKADSILMEFDC ALLACGASRPRDIKVPGRDAKGIHFAVDFLKSTTKALWANEMKPKDGTYISAKGKRVLVI GGGDTGNDCVGTVVRHRAASVLQLEMMPKAPEHRTEENPWPEWPKVSKTDYGQEEAAAVF GQDPRVYETTVKEFIKDENGNVCKAVLTKLEGRRDKKSGRIIMAEAAGSEYTVEADLVLI AAGFLGCEPYIANAFGVKTDERGNAATSKGGYRTNAEAVFAAGDMRRGQSLVVWAIREGR EAAREVDKSLMGYTNLNIQ >gi|224461045|gb|GG657759.1| GENE 2295 2410933 - 2412012 1272 359 aa, chain + ## HITS:1 COG:L161266 KEGG:ns NR:ns ## COG: L161266 COG0791 # Protein_GI_number: 15672918 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 253 349 86 186 197 95 54.0 1e-19 MKRLKATLVTVALTSSLIVTPVFAEPSVDDLKANKKAAEEQVSSLQSQLTDLLNKLGQLE EDLIAKGEEITKAEEDLKEAEALEKKQYEDMKLRIQFMYEEGNTSAVEAIVTSENFGDLV NKAEYVQNVHDYDRDKLQEYVDTKQKIADLKTTLEEEKTNLESMQSEYESKEDELNTTIE TKKSEIADFDDQIQAAAEAAAAEAARQQEAQRQAVASDNNGGGGSGSGGGTNSGGGGSSS GIDYTGTGNTATAQAIVSAAYSQLGVPYVWGGTTPGAGLDCSGLTQYCHRVAGISIGRTS QVQGGGGKAVSSPQPGDLVCYGTHIGIYIGNGQMIHAPHTGDVVKVANVYGSPWYRRYW >gi|224461045|gb|GG657759.1| GENE 2296 2412060 - 2413127 917 355 aa, chain + ## HITS:1 COG:CAC2663 KEGG:ns NR:ns ## COG: CAC2663 COG0791 # Protein_GI_number: 15895921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 237 355 141 255 255 83 38.0 6e-16 MCTISLLAGVLVVTPVSAEPSVNDLESSKAAAENEVSALQSELSATLDKIASLEAELKEK TEAVVKTNEELEEAAYQERQQYSDMKLRIRYMYEEGDGSAVETLLSAKSFSDLVNKAEYV QNVHSYDKQKLEEYIKTKEKVETLKNSLDTDVENMQAKQTALQKEKESLSGTISSKQSQI AQLDASIQDALAAAVEEQQTADGGGQDDADAGGNGNTDKGSSNNSGSNDDKNYAPPSGGS GAAVASYACQFVGNKYVYGGSSLTNGTDCSGFTMAVYAAFGVSLPHNDSAQEAYGRAVSY AEAQPGDLIFYGGHVGIYIGGGSIVHASNSAPYPEGGIKISSATYKPIKCVRRIF >gi|224461045|gb|GG657759.1| GENE 2297 2413320 - 2414405 1097 361 aa, chain + ## HITS:1 COG:CAC2943_2 KEGG:ns NR:ns ## COG: CAC2943_2 COG0791 # Protein_GI_number: 15896196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 252 359 20 132 136 89 40.0 1e-17 MKNRLTQAVIVASVASALVVTPVFAEPSVDDLKKNKAAAESEVGSLQAELTELVSKISQL ESDLIEKGEEITKAEDDLKEAQKQEEEQYEDMKLRIKFMYEEGDTSFVETLVSAKNFSDL VNKAEYVQNVHTYDRQMLTEYVETKQKVADLKVTLEEEMTSMENMQQQFESDKDSLDATL ESKQAEIANLDGEIQAAVEKAAEERRKEEEARQAEARRQEAAQAPSDNGGGGGTGGSSKP STPQPSYQGQGDTAVAQAIVSAAYSQLGVPYKWGGTTPGVGLDCSGLVQYAHRVAGISIP RNSEAQYAAGQKVSIPQPGDICWKPGHVGVYIGNGKMIEAQQTGTNIMISNVRAVGYARY W >gi|224461045|gb|GG657759.1| GENE 2298 2414551 - 2415795 1125 414 aa, chain + ## HITS:1 COG:L161266 KEGG:ns NR:ns ## COG: L161266 COG0791 # Protein_GI_number: 15672918 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 297 400 84 185 197 72 42.0 1e-12 MKKRLGQALITTLVMSSLVAAPVLAAPGGVDELEGQKQAVEAQAEDVNARLVSLLVQFDA LKQDMAGQKERIAQAEKDYKEASEKEQEQYEAMKLRIQYMYEQGDTSFLETVVSASSYSD LVNKAEYVQKVHSYDRKMLKEYVDTKNEVASLKEELESGEAEMEAMAEDLSGQQANLEGT LSDMRSQIADFDTQLAAAKEEAAQQLGELTEDTENMTASIDNSGSDDGAGGGKPSSGGST GGAAAGQTSKPTGNTGGSTGSSSNNNTSKPSNNNGGSNTSKPSNNNSGNTSKPSNASLGQ QIASKACTYVGNPYVYGGTSLTNGADCSGFVQSVHRLFGISTPRDSWGQLAGGKAVTYSN ILPGDVIVYSDHVAIYIGGNQIVHASNSKPYPAGGIKISSPANYRTVLGVRRYW >gi|224461045|gb|GG657759.1| GENE 2299 2416014 - 2416763 1111 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145469|ref|ZP_04744070.1| ribosomal protein S2 [Roseburia intestinalis L1-82] # 1 244 1 246 247 432 88 1e-119 MSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQKSVGKVDEAYQAISDI AAEGGSILFVGTKKQAQDAIKTESERCGMFYVNERWLGGMLTNFKTIKSRINRLKEIERM SEDGTFDVLPKKEVIQLKKEWEKLEKNLGGIKEMKKAPDAIFVVDPKKERICVQEAHTLG IPLIGIADTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQGATGYEEEYVEGEG AYEETAEAN >gi|224461045|gb|GG657759.1| GENE 2300 2416814 - 2417734 556 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 3 305 4 280 283 218 43 8e-55 MAITASMVKELREMTGAGMMDCKKALNETNGNMDEAVEYLRKNGQAKAEKKAGRIAAEGL VMAEVKEDKTAAIVEVNSETDFVAKNAEFQGFVKAVTEQALATDAADMDAFMAEAWIADT SKTVKDALTEKISVIGENLNIRRFEKVVTDGCVVSYIHGGGRIGVLVEASTDVVNDDIRA CLKNVAMQVAAMSPKYVSRDEVSQDYLDHEKEILLAQAKIENPDKPENIIEKMIIGRLNK EMKEICLLDQVYVQDSDLTVAKYVEKVAKEAGADMKVTKFVRFETGEGLEKKNEDFAAEV AAQMGQ >gi|224461045|gb|GG657759.1| GENE 2301 2418169 - 2418777 616 202 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570247|ref|ZP_03779272.1| ## NR: gi|225570247|ref|ZP_03779272.1| hypothetical protein CLOHYLEM_06343 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06343 [Clostridium hylemonae DSM 15053] # 1 202 65 266 266 349 100.0 9e-95 MTDEEFINTKTELESRLVYAYSTYYNKLPEAEGEALKEAQKAWIDCYYSYVSALEQRWLE PVKIFFGVTGKERRTNVYREFILLLLTNRITDLEEWNAGEFAEMEEAFAPFKKSELEKEK EQLQVDMGLCLYVIQEEYRQKIKAAHKKYFTFLESDERFISLITNENEIIITAEGLLQVQ RMSYLTSVHYQGCRFFRREREE >gi|224461045|gb|GG657759.1| GENE 2302 2418862 - 2420673 1365 603 aa, chain + ## HITS:1 COG:PA3054_1 KEGG:ns NR:ns ## COG: PA3054_1 COG2866 # Protein_GI_number: 15598250 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Pseudomonas aeruginosa # 37 231 65 262 293 94 32.0 4e-19 MKKSIVTILVMAMALFLVSCSTEKQDKGSGSTKVKLDELSTPAEESKWERTTSSEEVLEF CKTVAENSGGRIILDDTSFKTELGTPIPYMIISDKAPKSPDEVDEDKGVVYVNCNIHSGE VEGKEAMMIFAREVAQGKHDELLKDLVVVIVPNSNPDGNDDLDKNRIETQFTPKLVGTRT EGNGLNVNRDMTKLESACARTIVQLMNDWNPVLFIDAHATDGSYMRHAVTYNWGLNAGTD PELLEYNRDVFCSRALRKDSYLESKGKVSVPYGNWGYYYSGIVDEGWRTFEDYARYTTNY AGLRNRLALLLEVYSYDEFSKRVETQYECIYGALKVVAEDKDEIKEMIAAADARSLEREK NGIDPKRDIVALNSEMTPMSFEGKDKLTVLSYETDEEGQVIGTRLYDDEGDPYDIEYGKP VDYETEYWGTFVPTEVETMGAYYLIDQDCAEFAELMKFHGVEMTQLKEEITLNAEDYLHF GIESYTSGGAVIDGTPRDKYEGHYQTLVKGGWVQGDKSIVIPAGTYVISTAQRFGSFAAL MCEPAAVDGGVAWNFFDDYFDSKDGTFRANYSNTVTAEAGTEKERTEEISMPILKIPKFD TIK >gi|224461045|gb|GG657759.1| GENE 2303 2420892 - 2421557 498 221 aa, chain + ## HITS:1 COG:CAC0524 KEGG:ns NR:ns ## COG: CAC0524 COG0745 # Protein_GI_number: 15893814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 3 220 4 222 228 149 36.0 3e-36 MTIGIIEDDRLLNRALNIALNKEGFETNCVYTYREGLRMAQERNDLLLLDISLPDGNGIE LYREILKTRSIPAIFLTARDEEADMLTAFDEGADDYVVKPFPMKVLLKRVEAVLRRGADQ SGRLSWEGLCLYQKAKRVCLENREIQLTPKEYRLLEFMMEHRGQVLSKESILEHVWDIDG QFVGDNTVSVTVNRLKKKIEPDARNGKFISNVFGMGYRFGR >gi|224461045|gb|GG657759.1| GENE 2304 2421592 - 2422518 720 308 aa, chain + ## HITS:1 COG:CAC0451 KEGG:ns NR:ns ## COG: CAC0451 COG0642 # Protein_GI_number: 15893742 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 31 289 137 396 416 124 24.0 2e-28 MWIWIAGAALAGAVFGVGAARLAGRKCRQRELGEISDLAAHILNGTEIAGRAACEETLYA RIENQLIRIQRMTRGKQEEAEKSRERIQQLITEIAHQMRTPLVNMETYLEFLQDEDISQE EAEEYVTAVQLSEQKLHFLVESFIKMSRLEHHIIQIKKEETDLAATIFSVVSQMRKKAGE KGIRIYAEVPENLFCPHDANWLGEALVNVLDNAVKYSADGGSIELSAVKNDMFLRIRIQD HGIGIEEGEENKVFQRFYRGRRVTAEEGFGIGLYLAREIITRHGGFMKISREEPGIAAEI YLEASGCQ >gi|224461045|gb|GG657759.1| GENE 2305 2422572 - 2423252 283 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 2 200 3 199 223 113 33 4e-23 MEIVKAAGLQKYYTNASYEVRALDGVSLTVEEGEFLAVVGSSGSGKSTLLNMLGGLDEPT AGGVWIRGNSLRDMSREERTIFRRRNIGFVFQQYNLVPVLNVYENIVLPLKLDGAPIDET FIDHIIDVLDIGEKLYEMPGTLSGGQQQRAAVARALSVKPAIVLADEPTGNLDSGTSMEV MGLFKTCAEQFHQTLIIVTHEEEAAQMADRIVRIEDGKIWGQEGRP >gi|224461045|gb|GG657759.1| GENE 2306 2423249 - 2426035 2367 928 aa, chain + ## HITS:1 COG:no KEGG:CKR_2998 NR:ns ## KEGG: CKR_2998 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 10 926 4 828 830 242 25.0 8e-62 MRQNGRHTPNANTPVIRMLCAAVSKSSRGRNRILLGAVILGIVTLCMVFGVSFGKIQAEY LRSIRQSGTAASTYLEDGTKAQYNKIKSLSYIREVGRSWTPGYAYKEAGGESLCEITVLD KTAWDVMERPAYTGIEGHYPRKAQELMLPVRALEDLGIRTPEKGMKLHFIIEIGLFRTEK ETFTLCGWYEDYAEPASNMAKGYISEEKLKEWGGSMEKPDHLLIRQKDSMDGRRTEEKLY DDIRMADTSQTFTGGNTYAYDAVNRFMGGYGMAAFGAVLVLASIFFLIHNVMHISMAKDI RQIGLLNTIGTTAKQIRGIYFRQILRILAVGIPAGVLIAALLLSAVVPQLLGRQYLARYG GAAGLDVLRPQMLALAAVFTGIVTAAAAGETIYRAVSRSCIEAANYNGIEQPKTKRRVKK AAALRRRTPKRELWYMAWQNLCRFRGRSLRTVLSLFLGLEVALSAVVIASGADQSHAIEA RPDILVAGEFSSWGKAEGYGEEYKGRDPQDDPLETEGGNLALTSDNDYDSFSPVGEEVKE ELLAVDGVKKEESYAAEGGYMCPLYTRKGVRPMVADKESETDENYTANLDTVIQLIEAGE SGTIQILGRKEIEELKEFAEKSGSPADMESLENGTGVLLLHDHILSPAKEKQAEESVGEP ILFSRLWSKKERDRRLNATAQEREKMGDIETEKSEKMTLCGYMDTKAEGFPALRRTWHGP RIDYFVISEEGFKKLGTAKKTFYMELNVEKGKELSAEKAVRRILTRENGRRGDEAGLFLI SKAGLLQEAQSYIRGSRLILGILSMVLIAAGLMNYLNMMVTGLWSRQREFALMEGVGMTR RQLCGMLVIEGLYYCLLTAGLMLTAGSGILFLVHLYMKAKLAYFTFTCPWAVFGVMILVL ACICVCVPLAVSRKTGRTGLAKRLAQSN >gi|224461045|gb|GG657759.1| GENE 2307 2426388 - 2427476 1311 362 aa, chain + ## HITS:1 COG:BH2816 KEGG:ns NR:ns ## COG: BH2816 COG0404 # Protein_GI_number: 15615379 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Bacillus halodurans # 4 360 6 363 365 358 50.0 7e-99 MELKTPLYEAHVRAGGKMVPFAGYTLPVQYGTGVIKEHMAVRERAGLFDVSHMGEILCEG RDALDNLQMLLTNNFANMSDGQARYSPMCNEKGGTVDDLIVYKEADDRYFIVVNAANKDK DYEWMLAHQSGEVTFTDVSERYAQLALQGPQAMKILRKITKEEHIPQKYYHAVFDGEAGG IPCIISKTGYTGEDGVELYLDSEKAGEMWDLLLENGKEEGLIPCGLGARDTLRMEASMPL YGQEMDEDVTPLETGLGFAVKMSKEDFIGKKAMEEQGEPKRKRVGLKVTGRGIIREHQDV YAEGKLIGHTTSGTHCPYLGYPVAMALVSAKYAEPGRTVSVEVRGRMVEAKIVPLPFYKR SK >gi|224461045|gb|GG657759.1| GENE 2308 2427523 - 2427903 581 126 aa, chain + ## HITS:1 COG:lin2519 KEGG:ns NR:ns ## COG: lin2519 COG0509 # Protein_GI_number: 16801581 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Listeria innocua # 1 118 1 121 125 106 52.0 8e-24 MELREDMKYSKSHEWVKEEGDEVVIGLTDYAQSELGDLVFVNLPEEGDELTVGESFADVE SVKAVSDVYAPVSGVVSEINEELLDTPELINEAPYDAWFVKVKEISEKEELLSAGEYQAF VESEKE >gi|224461045|gb|GG657759.1| GENE 2309 2427916 - 2429244 1487 442 aa, chain + ## HITS:1 COG:lin1386 KEGG:ns NR:ns ## COG: lin1386 COG0403 # Protein_GI_number: 16800454 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain # Organism: Listeria innocua # 4 435 6 446 448 388 45.0 1e-107 MGSYVPNTEEERKAMLHEIGFSSIDDLFIHIPDEVKVKDGLNLPEGMSELEVRRKMQGMA AKNTVFPSVFRGAGAYRHFIPSIVRSVISKENLMTAYTPYQAEISQGILQSIFEYQTMIC DLTGMDASNASVYDGASAAAEGVAMCRERKRKKAFVSATVLPYALETVRTYCFGNEMQLE VIPEKDGVTDLSYLEEHIDEETACVYIQHPNYYGSLEDAEKAGEITHKAGAKFVMGVNPV SLGVLKTPREYGADVAVGEGQPLGLPLGFGGPYLGFMTCTAGMTRKLPGRIVGETKDAAG KTGYVLTLQAREQHIRREKASSNICSNQALCALAVGVYLAAMGRGGIRSAAVQCMSKAHY MAEELGKIGYETVNKGEFFHEFVTSSKVPAAQALEKLEKEGILGGYPLADGTILWCCTEM NTKEEIDKVIHILKGGAVDADI >gi|224461045|gb|GG657759.1| GENE 2310 2429231 - 2430661 1604 476 aa, chain + ## HITS:1 COG:TM0214 KEGG:ns NR:ns ## COG: TM0214 COG1003 # Protein_GI_number: 15642987 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Thermotoga maritima # 1 473 1 473 474 522 56.0 1e-148 MLIFEKSRSGRGMHMLPECDVPAVMPEAKDMRESALHLPEMSENDLSRHYTELAKKSHGV NDGFYPLGSCTMKYNPKINNDMADLPGFTEVHPLQPEHTVQGCLEVIGTIEKYLCEITRM DRMTMQPAAGSHGEFTGLLLIKAYHESRGDTKRTKIIVPDSAHGTNPASAAMAGYSVVSV PSGPDGCVDIEKLKEAAGDDVAGLMLTNPNTVGLFDKNILEITEIIHQCGGLNYYDGANL NAVMGIVRPGDMGFDVIHLNLHKTFSTPHGGGGPGSGPVGCKQFLSPFLPSVLVEGEDEL TFVRPKQSIGEMKSFYGNFLVVVRALSYIMTLGKEGIPEASRNAVLNANYMMNKLKDLYT MAYDEVCMHEFVMSLEDLKKKTGVSAMDIAKGLLDNGIHPPTMYFPLIVKEALMAEPTET ESKETLDEAIEVFRSLYHEAQEHADSLHSAPVKTPVTRLDEVGAARHPVLRYQFEP >gi|224461045|gb|GG657759.1| GENE 2311 2430679 - 2431677 1002 332 aa, chain + ## HITS:1 COG:VC1388 KEGG:ns NR:ns ## COG: VC1388 COG0095 # Protein_GI_number: 15641400 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Vibrio cholerae # 2 327 1 333 338 237 38.0 2e-62 MIEKITYIESSQTDPRKNLAVEEQLLLTCGADECILYLWQNRHTVVIGRNQNAWKECLVD RLKEDGGYLVRRPSGGGAVYHDLGNLNFTFLVQKENYDLDRQLEVIIRAVKRLGIEAEKS GRNDILAGGKKFSGNAFYEQGSRCYHHGTLMADVNIGELSKYLTVSKEKLKSKGVDSVKS RVANLKEFCQDLTVAGLKEALVAAFEEVYGQKAGTRSVEELDQEELAGLEKKYSSWEWTF GRKTDFTYELSHRFPWGTVTLQLQVKGGRIEDAAAWSDCMKPQVILDLPRYLKGLYYRRE AVLPQLGLFWSEDAEEEQMMKDMISWLSEVEF >gi|224461045|gb|GG657759.1| GENE 2312 2431694 - 2433097 846 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 462 4 458 458 330 39 2e-88 MEHTFDLIVIGAGPGGYVAAVKAAKLGLKTAVIEAGRAGGTCLNRGCIPAKAMIHASSLY QEVMSGGRFGVSASDVTYDYKKILSYKEETTEQLCQGVEQLLKANKVELINGKGVLTKER SVKVTADGKETVYEAEHVILAAGARPLMPPIPGLSLPGVLTSDDVFRLEAVPDSLLIIGG GVISVEFATVYQALGCRVTIVEAMPRLIPNMDKEISQNLKMIMKKRGVDIHTGASVKAVE QDGEQLACLFEEKGKEYKISSGYVLCAVGRAPNTDGLLEEGTGIRLEKGRIAVDSRFRTD MEGVYAIGDLIKGTQLAHAASAQGMYVAEVIAGAEPSVDLDVIPGCVYTNPEIASVGMSE EEAKENGLEVKTGKFIMSANGKSLITKEERGFVKVVAEEQTGIVLGAQMMCARATDMIGE FTTAIANKLTVKQMLCAVRAHPTYNEGVGEALEEVFGEAIHVVPRRR >gi|224461045|gb|GG657759.1| GENE 2313 2433190 - 2434869 1925 559 aa, chain + ## HITS:1 COG:NMA0617 KEGG:ns NR:ns ## COG: NMA0617 COG2759 # Protein_GI_number: 15793607 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Neisseria meningitidis Z2491 # 1 559 1 558 558 704 65.0 0 MGFKSDIEIAQGAEMKVINDIASSIGIPDRYVENYGKYKAKIDYRYYTDELAERPDAKLI LVTAINPTPAGEGKTTTTIGVADAMNRLGKKTMVALREPSLGPVFGVKGGAAGGGYAQVV PMEDINLHFTGDLHAIGTANNLIAAMLDNHIHQGNALDIDTNKVTWRRCVDMNDRQLRSI VDGLGSKADGVTRQDGFDITVASEIMAVFCLAKDITDLKERVSRIIVAYSRSGKPVTAGD LNAQGAVAALLKDALKPNLVQTLEGTPAFIHGGPFANIAHGCNSVIATRMGMKLADYMVT EAGFGADLGAEKFVDIKCRMSGLRPNAVILVATIKALKYNGGVAKADLQEENLVALEKGL PNLLKHIENITKVYGLPAVVAINKFPADTEAELDLVREKCRELGVNVALSDVWAEGGAGG RELAGEVIRLCEGESTMKFVYDTDAGVQEKIEAIAGKVYGADGVDYTPKALKEIKNLESI GLGGLPICMAKNQYSLTDDPKKLGRPEGFRITIRDVAASAGAGFLVALTGDIMKMPDLPK VPSAEKIDVDENGVISGLF >gi|224461045|gb|GG657759.1| GENE 2314 2434886 - 2435512 794 208 aa, chain + ## HITS:1 COG:SPy2084 KEGG:ns NR:ns ## COG: SPy2084 COG3404 # Protein_GI_number: 15675842 # Func_class: E Amino acid transport and metabolism # Function: Methenyl tetrahydrofolate cyclohydrolase # Organism: Streptococcus pyogenes M1 GAS # 2 205 3 206 208 120 34.0 1e-27 MMLEMKTTEFLEALSSSEPVPGGGGASAAAGAMGAALGMMVANLTVGKKKYADVEAEVIE VREKLRAYRERLAELTDRDAEAFEPLSRAYGLPKDTPEQREEKAGVLEQALYEASVVPLE IMETVLRVMELLEALGEKGSRIAISDVGVGILFAGAALEGASLNVFINTKLMKDEKRAAE LNGEADRMIREGRLLKEKVYGGVLDHIR >gi|224461045|gb|GG657759.1| GENE 2315 2435530 - 2436387 807 285 aa, chain + ## HITS:1 COG:BS_folD KEGG:ns NR:ns ## COG: BS_folD COG0190 # Protein_GI_number: 16079487 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus subtilis # 3 279 4 279 283 230 41.0 2e-60 MDTLMKGADVAAAMKEGLIKETEDLKEKGIHPCLGIVRVGERPDDMAYERGARKRMESIG IRCEVTELPEDITQEAFEEAFRGVNDDPRIHGILLFRPLPPHLDEEPVRAMIHPLKDADC MSPVNIAKVFSGDESGYAPCTPEAVMEMLDHYKISLKGKRVTVIGRSMVVGKPLSMLLLK RHATVTVCHTRTVELSKTCRDAQILVAAAGKARMVTGDMVGDGAVVVDVGINVDEEGNLC GDVDFDSVQEKASHISPVPRGVGSVTSSVLAKHVIKGARCLNEGC >gi|224461045|gb|GG657759.1| GENE 2316 2436414 - 2437037 669 207 aa, chain + ## HITS:1 COG:no KEGG:Tresu_0483 NR:ns ## KEGG: Tresu_0483 # Name: not_defined # Def: formate/nitrite transporter # Organism: T.succinifaciens # Pathway: not_defined # 3 200 8 207 214 160 47.0 3e-38 MKRYIKIFFLAAGAGLFIGVGGIVYLSMENKTAGSLLFTVGLYAVVLNGLYLYTGKVGYI VNEAHKRAYGMLLLVTWAGNLAGAALAARAVLLSRIDGIREAAAGVCRIKLNDRPVSILI LSFFCGLLMFIAVDGFREKGNPLILFLCVSVFILCGFEHCVANMFYFTLAEAWSVKAAGY LLIMTLGNSLGGMLVPAVKRLEVKVLI >gi|224461045|gb|GG657759.1| GENE 2317 2437030 - 2437446 468 138 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1132 NR:ns ## KEGG: CDR20291_1132 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 138 1 140 140 192 67.0 5e-48 MELQDQKCVMVIDEALPAGIAANTAGIMGITLGKHIPEAVGPDVTDKNGRAHLGIIAVPV PILKASREKIKEIREQLYAPEFSDLTVVDFSDVAQSCNVYDEFIQKAADSDEFIYYGIGI CGRKKAVNKLTGNLPLLR >gi|224461045|gb|GG657759.1| GENE 2318 2437641 - 2438216 493 191 aa, chain + ## HITS:1 COG:BS_yvkB KEGG:ns NR:ns ## COG: BS_yvkB COG1309 # Protein_GI_number: 16080573 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 188 1 186 189 99 30.0 3e-21 MDETQNKIITAAMTLIMERGYTATTTKDIAAEAGVNECTIFRRFKGKKEIVLSAMELPEW NPCLSEEDFSYSGDVVRDLISFSEVYMSKVTPRMVKVSIGLRTPELYPYTSDSILEVPRV FKKVLTAYFDKMIRGGKIRDGDRESLAMMFLSLNFGFVFLSASFGEKLTHIEKEKYICNS VGIFAEGILKK >gi|224461045|gb|GG657759.1| GENE 2319 2438303 - 2438593 197 96 aa, chain + ## HITS:1 COG:MA2290 KEGG:ns NR:ns ## COG: MA2290 COG5470 # Protein_GI_number: 20091128 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 19 96 6 83 88 65 37.0 3e-11 MVYFIAAVYIDEEKGRGDYDEYIREVRPIVEQYGGRYIVRSDKITPLGEKWRPGRLIVIE WDTKERLDKCFQSGEYRKIASKREGSVDSRAVIVEG >gi|224461045|gb|GG657759.1| GENE 2320 2438597 - 2439427 733 276 aa, chain + ## HITS:1 COG:BH2820 KEGG:ns NR:ns ## COG: BH2820 COG0491 # Protein_GI_number: 15615383 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Bacillus halodurans # 64 178 50 164 211 71 36.0 2e-12 MEICNNVHQIRINFNVTDKIERYVYIYLITGRRCYLIDTGTAGCEAKIGRYMEGIGRRLE EVAAVFLTHAHPDHIGSAAALKRITGCKVYAPEKEKAWIENIDLQFKERPIPNFYALAGE SVSVDEAAWQGHIISPEPDVTLRAVETPGHSAGSVSYVFEEEQVIFTGDTVPAPDDLPII TDVRESIQSIQKLRTQEHIQYLCPAWDRVYEGRETKKVLDRSGELLDRLRQCVIQTQKRY PGRTAAEKTELIKADMGWGHLDSNPLFAASIKACIE >gi|224461045|gb|GG657759.1| GENE 2321 2439498 - 2440457 879 319 aa, chain + ## HITS:1 COG:CAC3454 KEGG:ns NR:ns ## COG: CAC3454 COG0042 # Protein_GI_number: 15896694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Clostridium acetobutylicum # 1 307 1 307 311 356 56.0 3e-98 MDYYFAPMEGITGYIHRSAYQALFPCIDKYFTAFIAPNQHGKLSSREKNDILPEHNRGMK VVPQLLTNKADDFILTAGKLKEYGYREVNLNLGCPSRTVVSKYRGSGFLARPEELDRFLY EVFEKTETDISVKTRTGRDSPQEFVRLMEIYNKYPLKELIIHPRTQQDFYKNTPDLSVFA QALSVSRCPVCYNGDIFTTEDLKVFRARFANVDKVMLGRGLLVNPMLIEMAEDGTAIDME RIRKFHDMVYGGYREVLSGDKVILFKMKELWSYMIHLFSDSKKYAKKIRKSEKLPAYEEA VDALFLECPLREPERNAQT >gi|224461045|gb|GG657759.1| GENE 2322 2440487 - 2441110 514 207 aa, chain + ## HITS:1 COG:BH3035 KEGG:ns NR:ns ## COG: BH3035 COG1989 # Protein_GI_number: 15615597 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Bacillus halodurans # 69 206 21 159 162 63 31.0 3e-10 MICNIAAAAAGAAAFCMIAGYCSPGNGRGSRPLCTWIFRGTGGITALYCLHRYEEAGACL TMFGFFCILAAVALTDLGRREIPDMYCAAVVILAFISAFTLPGLPVWERAAGSLCVSLPF LVVAVAVPGAFGGGDVKLMAACGLFLGVKITAVAAAAGILLAGCAGAGLVLSGRRGKRGV LALGPFLCAGMTAGVIWGEQMIQWYIS >gi|224461045|gb|GG657759.1| GENE 2323 2441218 - 2444217 2994 999 aa, chain + ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 703 809 400 524 656 62 33.0 6e-09 MKRLKRWLALVLAVALLGANVVYSMGSELKANEIEQEQQAAQPENTGGQEQQTFTSDGVS VEVTDSGTETAEQTEEPASRQSAQLQQTPQDPEPVQPENTDPAGGENNTADAVRYKVTVK ASGGGFGKVEVTNKGVPAESDLSRDYEIQADEASSVSLTVTPEEGYTVETVKANGNALAA SGTEGKASVYEITEIAEDKVIEISFAAEAPAVSPMSLSAEDRALEAPSGNYTVTYKVAGQ FQNAYVLTKGSDGKSYTTDAISCEKRLTSFGVWLKTKSGTVVMPVTMTLANDVTGTDMDG NPVRYTRGTVISKLDGKNAKVVMPYSHTYFKADSNIQIEVTPAEEATYNVTYHVADGYRD EYTLTGNGASGLDFTKYSQWCSSRFTSFGVWLKAGKSQVMPVSMTLLSEAHGTDDRGNPV TFAKGSVISELRESSNGQVGAYVTNGFNFVYFEPDADIHIQVEPALFKVHTQHFLEQLDG NYKLESDVEGEVYAPGTEVKAEQAEYTGFTYSPDAEGTVAKGTVTGLKSLVLKLYYKRNV HEVTYEIDGKADAVKETYKYGENVSLRAVPAKAGYDFDGWNVKQDFAMPDEDVVIYGGFV ARGDTPYRVEHYKEGLDGRYTLEDSDIEHKTGGTDTETTAVPADFEGFTYNPDAGDSKTT GTISAEDELVLKLYYDRNSYKVIYQQPDGQRIGEPDTYLYGEETGDLKEAPAKTGYTFGG WNTDALPALMPAGDVIVEGSYSINSYSVTYVVDGEIYSQPELYEYGSTVIPVPEPLRRGS SFSGWDRPFNFKMPAENIVIEGTFKVNDYNYKIQYYYGNILDESQSITDQAEYGTTVAAP APETVVYEGRGYKLPDGGVYEIQVSDEPEENVINVTYEAASASTAASSPAGPASPSAPAS DNGAVTPAGVIQTIFEPVTALAEKVADRVEDYQKTVQSADEDVPLANGETPPVQSQCILH FLILLAAFAIELFYIRNRKREQLRYYAGQGVSAKAELDD >gi|224461045|gb|GG657759.1| GENE 2324 2444404 - 2446068 1302 554 aa, chain + ## HITS:1 COG:CC0655_2 KEGG:ns NR:ns ## COG: CC0655_2 COG2199 # Protein_GI_number: 16124908 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Caulobacter vibrioides # 383 554 2 174 205 92 37.0 2e-18 MKENKIRKRLVLFMTAAAVMSFIVVMVLACRSGRGDSARYEKAERRYMDKGVSVLQEDGR EEVKEYPCRSDGKEGYFYYKLPEDIEDNAVLVLPNVYQKIEVTLNGKLLYTYGMDQDSPY YMEARLNCAVRLPDGSGGRELEIHLVNTEKMGKASLQQGYLTTAGELSDSLLADNLWAFL FCVLTAMTGMCILAVSLWQYIGKAGDLSRIFFCLGQFALLSAVWVFTDSGLPQLIFNNSQ GLMVLSFEVFMLMPVPLLQFVQLVCEYSRRALRVLVTGYIVNFFLQNAAYALKLSDFKKM VYLTHIVMVASITAIIYFILKEARNRHSMYAKWVLAGVGIFAGFACMSLVSYYVTGGIQN EKFFITGFFIFLAVLIILATLKFQEFSKESARAAVLKELAYKDMMTGIGNRTLYEEHIAV YESAPRPEAAAVIILDINNLKDVNDRFGHRAGDELLILAARCLREAFGIRGTYYRIGGDE FAVILKEADAGEEECRRLLGRCIEKNNAGREIRLSVSMGYAAPDAGKGAAHIRELIEKAD ARMYEEKRRYHAGR >gi|224461045|gb|GG657759.1| GENE 2325 2446072 - 2446830 757 252 aa, chain - ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 8 242 3 235 243 133 32.0 3e-31 MLTNASKIDKSTPVPLYFQLKKLIMEEIRNGTYKVGSLIPTEKELSDTFQISRTTVRQAV TELVQEGWLYRIKSKGTFVSQPKISQDFIKKLESFNDQILRAGMTPSTEVLKLEVQKAGA KTAASLELKGKDSVIYLHRKRLANDEPIVTIETFLPYDDCSFILSHDLEKERLYSILNER KETSVFRVNRIVEAVEADSRDEQYLDIKKGKPIQFFTSTGYNAYGKPIEYSLARYRGDRN SFEITVFPDNSR >gi|224461045|gb|GG657759.1| GENE 2326 2447038 - 2447784 684 248 aa, chain + ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 8 242 2 235 243 130 29.0 2e-30 MNQFSKESIDKNTPVPMYYQLKKIILDMIREGKLKPGDMIPTELELSDIFGISRTTTRQA IMELVMEGQLYRIKSKGTFVAEKRVIQDFTNVIRASHNLLQSQNVKTTTKVLELSVIKAN DLVSRMLQQREGEDVIHLRRLRFVNDEPNVLADAYLPMCCRDMLDRDMNKTGLYEFLDQS AETTPVKAVRELEAISAEESEAELLGIKEGDPIQLTTSVTYTKEGKPIEYSIARFRGDRN VFRCEVNI >gi|224461045|gb|GG657759.1| GENE 2327 2447897 - 2448304 430 135 aa, chain + ## HITS:1 COG:BS_ywkD KEGG:ns NR:ns ## COG: BS_ywkD COG0346 # Protein_GI_number: 16080755 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Bacillus subtilis # 6 134 3 128 128 62 32.0 3e-10 MGEIKLDGLAHIGLYVNNIERTLEFYMEKLDFELIHEAVNEIPEGEVLVKFIQNGSCMLE LVQFPYTIKREDGWFDHISIAVHDLDKVMEHLRQKGIIFEEGSYTEALNVFPPKGSRWVF FRGPDGEHIELNERM >gi|224461045|gb|GG657759.1| GENE 2328 2448456 - 2449520 1347 354 aa, chain + ## HITS:1 COG:AGc5109 KEGG:ns NR:ns ## COG: AGc5109 COG1879 # Protein_GI_number: 15890064 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 42 347 69 356 357 92 26.0 1e-18 MKLKKVLSVVLASIMVLGLAACGNKESADSEKEGGKDKEEYDIVYLSPSTESEYWQYAEI GMRNAIADIEKKEGIKINFSVSGPASESETDAYIKAYESVIASSPDAIITATLAPDGTVP KTQEAKDAGIYVNFVSMGLEGGDSNDYGDYYGVHYYCDNTTIGETAAQSMLDGLEANNIE PKGKIGMHMSVVVETLEERMDGFKAYMAEHAPDIECLDTLYNENDVNNAQSNVETQISTY GDELIGLYGGNNVSGDGIALGLKNAGSGNKILGIGVDSDSLEIEALEAGNLYAIIVQTPY DQGYKAVENAVEYLQTGENSESEKHINCPSQAVTKENMDTEESKALLDPTILKK >gi|224461045|gb|GG657759.1| GENE 2329 2449592 - 2451103 206 503 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 277 497 31 232 312 84 27 3e-14 MEEDIILKVDNISKSYPGVKALQNISLAVRKGEVRALLGENGAGKSTLIKCIMGVEKPEE GTVSINCGGSWKTPQSVAESKECGMHANYQHVNIARELSIAENYFLGRLPVTKLKTVDWN LMNEESRKIIDKFEMNVDPGAKISELSVAMQEMVTISKISVNDNIRLVIFDEPTALLEND KVEILYRYIRELKERGVSVIYISHRLEELMDICDTVTILKDGQYVDTKKISEVDKDMLVS LMVGREVGSLYNIRHRKAGAELLRVEELTSKGRFEHIDFQLHEGEILGFAGLVGAGRSEI MRAVFGVDAADNGDIYIRGEKVNIKNPQDAIQKGIGFLTEDRRLDGLALPLSVKVNTNMY SYDLISRAGVINRKKEAERAEEYKTKIGVKTPDIEQSAENLSGGNQQKVVIAKLLCRDPD ILIFDEPTVGVDVGAKQEIYKIMELLAAQGKGIILISSYLPEVMGLSDRMIVMSEGRISG VLDRNEIEVTTEEDVLRLASAVI >gi|224461045|gb|GG657759.1| GENE 2330 2451126 - 2452091 966 321 aa, chain + ## HITS:1 COG:mlr3338 KEGG:ns NR:ns ## COG: mlr3338 COG1172 # Protein_GI_number: 13472896 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 35 317 38 319 322 180 39.0 3e-45 MNRVKTGKAGTLLRRTEFSLVIIIVVIFLVAAFGTDNFLTNYNLTNILKQCSIIGVISIS ATFIIITGGIDLSCGAICGMSTLIVAMGQAKWGMTVSVSILLALAVSVICGLYNAVIINE FKVPPFIATLGSMTILRGLVKVISNASTIAGLDKKFGEFASESVAFIPKLAVIWVIVVLL GFFILHSTTFGRNLYVLGSGQEVARLCGISIRRVTYMTYGIAGFLCGVAGVMLASRINSA VPTAGTGYEMNAIAASVIGGASLSGAKGSVWGTALGTILMTLIDNAGIQFGINSFIMEIS TGVLITIAVIIDQMKNKKTAR >gi|224461045|gb|GG657759.1| GENE 2331 2452109 - 2452861 951 250 aa, chain + ## HITS:1 COG:no KEGG:SLGD_00878 NR:ns ## KEGG: SLGD_00878 # Name: not_defined # Def: deoxyribose-phosphate aldolase (EC:4.1.2.4) # Organism: S.lugdunensis # Pathway: Pentose phosphate pathway [PATH:slg00030] # 85 237 61 211 219 65 26.0 3e-09 MFDFSTVQDKKIADRVFAEAKEFLSLCHFGLQGITRTEDDVIKIVEKLKETRMAPLAFDT EMQFVPLVRELFSDYCCKVRLHCAVSYPMGRLVSDSKMHALDRLRTMEVDDVCVCLDWQA IFSGRYKDVEKEAARIVDEFQNDFYRVALVIPATLMSDTQIIETCRALDEAGTVSVKVNP GAALGVSFEEVALIKRMFPNRFDIHPSGNIRTLSDVLRYREMGCNNIHTAAALEITDDFI VKKLKEYGGI >gi|224461045|gb|GG657759.1| GENE 2332 2452864 - 2453505 693 213 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570278|ref|ZP_03779303.1| ## NR: gi|225570278|ref|ZP_03779303.1| hypothetical protein CLOHYLEM_06374 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06374 [Clostridium hylemonae DSM 15053] # 1 213 1 213 213 416 100.0 1e-115 MKIILTNIPNYSVSDENCENLYYRAIDNKADAVLIGPSSMKTGERFKGRGVKTAVSISYP SGTAFPDLKAQEILDCEKLSGVADMYFVTAAAGYYMSGHEDNLREEMRLCVEAAKKPVYF ITEAAEMTDECLEKMCRIACEEHVKGIVTSTAFMPYDIKRAGAADVSRLKAYGADQLETV AFGPFCAGEDVEEIQKAGADMMILNESCEIGNV >gi|224461045|gb|GG657759.1| GENE 2333 2453524 - 2454462 917 312 aa, chain + ## HITS:1 COG:SMc02335 KEGG:ns NR:ns ## COG: SMc02335 COG1070 # Protein_GI_number: 15966315 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Sinorhizobium meliloti # 6 307 7 309 509 187 32.0 3e-47 MKTYIIGADIGTQSIKVHLYDEELKLVRAVSKEQYVDTPKPMWMTQRASSWWKLLTESIQ QLLSDAGISGKEVAAFGCCAHMHGAVPVRLDGSIVQDDIQLYSDKRGGYLADKIAEEMTE ELYSISANMPTSSWHGIKIKWLKENDPDVYEKAEKFLTPKDFINFKMTGETCTDYSEAAG VFAMDQKTGEWSDRLLAVLGIDREKLPRIQKAYDIVGNVSEKAAAETGLSTETVVITGGG DMLSMLYVSGMHKKGTVADITGTGGIICGYTDQPVMDRRIMNLRHVLDGWVPFGNIDAAG VSFRFLRDNLAS >gi|224461045|gb|GG657759.1| GENE 2334 2454547 - 2461311 6227 2254 aa, chain - ## HITS:1 COG:no KEGG:Ccel_2644 NR:ns ## KEGG: Ccel_2644 # Name: not_defined # Def: cell wall/surface repeat protein # Organism: C.cellulolyticum # Pathway: not_defined # 1668 2188 1265 1799 2178 246 35.0 1e-62 MKKFKRWLALMLAVVLVGSNAIYSMSSALKANEIDAAQEASAQADSEPEPQVPESNNEGV DVSVVNDGKSGQTQEPQQSEPQQQTGQGTEQGASVTEPQTGEPQQPQDTEQEETKYDVVI HKPEADGGVVKVWTAGDKRTVTYDGNNVFKEEVAEGTTYNIEITANDGYEVEKVADKNGN AIAPVNTGGKVYTYSLSNIAANEEVSILYKEVKESEIKDNDGAGSTDESPKAEETAARPA KTLSETVDGTVITVEAPEGVLEEGWTLSVKSVSRKSVESAIEKALEEEKEISGIKAFDIT ILDKDGRELQPDGSVNVTFSNVGVKGEVLEVYHVNDSKKKAELVGQAVGSYAVGCEAEHF SIYTIVGTNWIYANDPSQAYEMYVNDEITLKSTRGGEWHNEAKGHEWEISDTDADKIKIT DKKDYSADVKALKASDSIIKITHRYEYNYDSSQSLSEREEHFYIKIKDRQQVSSVKVTGE SQTMTKADEPLQLTAVTDPAGYEVTWASSNPEVAKVSKDGKVTALKAGATKITASAGTVS SEPYVVNVADAYKLTFNVNGGKGEAAPEEVNTTAGSQITLPNYKGSVDGRLFVGWSTDKN AVAAGNDHYTVPVYPAGSSYLMPAKNVTLYAIWAAQNLNADFYIRKDGVIPTEPQGHAAA EYTSAISMNNAIKVGAFYANTTPPGVADMLSKTPTDAQIKKVYNKYDPSTQFVLWYVIKH QDNWHVDGVLLEKSKVSLSYNANAPAGWDNMPDGKQYIKDSSATVSTKIPVREGYNFDSW NTKADGSGTTYAGGETFTISEDTTLYAQWLPKGDTKYVIEYYLQNDDGTYPDSASRTDIR EGTTGAIVNSGEIGIDGYTYDEEHKLNVSTGEVKADGSLVLKRYYKKQFTVTYDPGTHGA FEAQVYDKQYYGEATPKFDGETAAEDGYTFKGWNPEVKEKVSGNITYTAEWTANKATVSV WFYKAEQNSAAYVITSDGKLSTDGSLNKYSKEIDSDNKEGYSAEQIKAYADEAYGITEET DRYDSYEIQVLHSKTKEWETIDDLDAYAIQDGDDIRYHVTAEAAHKLTYVAGDHSSGDAY FDAYYFKGDSAAVKSFNDTGLAADTGYKFDHWENAAGETVSGSYTMGDKDTELKAVCVKD DLSVHELKYTVEYYKDGVIVTGDTKEIKRNVWINDDEIPVLPNDIDTSDGKYPGYHFTGT DPKEIGETVKNGATVKVYYAANTDTAYTVQRFYETDGSYKAEPDEILPGEGTTGQLADTI EYRSTDRPGYVYDKDAPGTIESGVIQGDGSLVLKVYFKQQFSVTYKPGTHGTFDDKTFSG LSYNADTPAFTAEGEAGYEFAGWAPDYSDKVTSSVEYVAQWKAADNTKYTVEYYYQNEGT YPETTENKRDAYGTTGDTAKLAADDTLTARAGYVYDSEYEGNVTEGTINGDGSLVLKVYF KQQFSVVYKPGTQGTFQEKVYDDLDYGVKTPAFGAQPTGNPGYTFAGWGEVAENVTDNAQ YTAQWTANTNTAYTVEHYQEQLNGNYTETETENLTGTTGATATATRKTYTGFTFNPEVAG TIESGTITGDGKLVLKLFYSRDEHTVTYMVDGQQYGETDTYKYGQNTAPLREEPVKEGYT FNGWNGGLPEVMGTEDVVISGSFTINSYNVTYELDGQPYGETERYEYGSDVSVRPAPEVP AGYHFGGWSQKEDFKMPAEDVKIEGSIIANDDTKYRVEHYKENLDGTFTLAEGRDETGTT GTPVTEEPKKYEGYTYDAEAGEDPLASGTIAGDGSLTLKLYYTRNSYNVTYKVDGAAYAG PQSYKYGEQVSIEPDAVKEGYTFSGWSQKEAFEMPANDVEITGTFTANGDTKYTVIHYLE GLDGKYEEGLTEPLNGKTDTIATANPTTFTGFTYDETSEKNVTEGTITGDGKLVLKLYYT RDEHTVTYMVDGQQYGEIDTYKYDESVKDLRKEPTKEGYTFSGWDRTLPDKMGTEDIVVS GSFKVNSYNVTYELDGQPYGASERYEYGSDVTVRPAPEVPAGYHFSGWSQKEDFKMPAED VKIEGSIIANDDTKYRVEHYKENLNGTFTLAEGRDETGTTGTPVTEEPKKYEGYTYDAEA GEDPLASGTIAGDGSLTLKLYYTRNSYNVTYKVDGAAYAGPQSYKYGEQVSIEPDAVKEG YTFSGWSQKEAFEMPANDVEITGTFTANGDTKFIVKHYLEGLDGKYTEGKSEDKTGETDT IATANPTTFTGFTYDKNSEKNVTTGTITGDGKLV >gi|224461045|gb|GG657759.1| GENE 2335 2461561 - 2462247 426 228 aa, chain + ## HITS:1 COG:BMEII0292 KEGG:ns NR:ns ## COG: BMEII0292 COG2199 # Protein_GI_number: 17988637 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Brucella melitensis # 84 189 218 322 348 63 37.0 3e-10 MQMKKLSLLKMVQLTVLVILSLVSICLLLNKDIKQYIFSNMAATILFVVVWIILITGFVF LLMDFNVISEMKLNYHNLYQVAYSDPLSGIPNRFSCDVLIEKYIDKDLPESVGCVVLDLT NLPEINSEYNHATGNKLLSEFSTLLSSASANHGFVGRNGGNKFLAIFEDCDREKLNNFLK SVERKVERHNAAPKALPIEYKAGFALNSEEEFLQITRLIALANQRVYE >gi|224461045|gb|GG657759.1| GENE 2336 2462267 - 2462857 524 196 aa, chain + ## HITS:1 COG:BH0263 KEGG:ns NR:ns ## COG: BH0263 COG1595 # Protein_GI_number: 15612826 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 12 184 8 182 187 81 27.0 8e-16 MAELDYEYIAGLVKKAQKGNSDAFAEIYAATYQKQYKFTYQYVKDAYLAQDILQEVYILV LKNITKIKNPRLFISWLNQINFRICLNACKKRSQQVQELGQTADGKSLADVQAGESLNPE QEFARKNANEELMEKILSLPPHESQVIIMKYYNEMKLEEIASAMDISRSTVKRYLAHGRA SLEKILGEQKGGINIG >gi|224461045|gb|GG657759.1| GENE 2337 2462850 - 2463575 750 241 aa, chain + ## HITS:1 COG:no KEGG:Closa_3855 NR:ns ## KEGG: Closa_3855 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 58 239 31 216 236 80 26.0 7e-14 MDNTNTNPERIPELDPETANQLLNNIFAECEVVPNAIPLETLESWGNYKKTEFRLGRIIS YIVLVVLVLLPLLFFRPTIIAQRTNVDSTDNAVYEIQVKTLLPVDGVSATIDGIPVTLER VNSRNYMVAIPQNGTLQIKATSVNGQYSVKKYEVTHLDMDKPELIRSYTENGYINIVVRD TYSGIDYDGIAGTDSEGNTIEPDAVDKENETITFKIPSQPVNVIVPDNSGNELEILISPT E >gi|224461045|gb|GG657759.1| GENE 2338 2463596 - 2464519 981 307 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1535 NR:ns ## KEGG: EUBREC_1535 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 38 307 47 312 312 292 55.0 1e-77 MNKKTIFKSVLLVILCCILFCSCAGKKSAPSKSGPVRDNTPKVYVPEASGTATYGNDTVT FDASHTDQGYMMVQYRGTNEKVKLQFAAPDGSTYTYLLSLSGEYETFPFSAGSGTYSASL LENVQGDMYSIAFAQDIEVNIADEFTPFLYPNQYVNFTPDSNAVKEGEKLAKGAHSDLEV VENIYHYVIKNVSYDDDKASSVTYGYLPVVDETLKTGKGICFDYASLMAAMLRSQGIPTK LDIGYAGDAYHSWISTYVDDKGWIDNIIEFDGTSWELMDPTFAANSDNKSLKEAIGDGSN YVLKYTY >gi|224461045|gb|GG657759.1| GENE 2339 2464562 - 2465611 1124 349 aa, chain + ## HITS:1 COG:aq_747 KEGG:ns NR:ns ## COG: aq_747 COG1459 # Protein_GI_number: 15606135 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Aquifex aeolicus # 6 349 61 406 408 161 27.0 2e-39 MAQQTFTPLSNMEISAFCSQMAMILQSGISSVEGVTLMLEESKSPDEQELLTNMQKTLFE TGSFYEALVSTCSFPDYMLQMVNIGEQTGKLDDVMKSLSEHYDREAAIAQSVKNAVTYPL IMICMMLLVIVVLITKVMPIFNQVFRQLGSEMTGFSKAILNLGTALNRYSVIFIAALVIL IIFVILITRTKSGRAAFGRFTGRFAWTRSVSEKMAACRFASGMALTLSSGMTQSECLELT SKLTDNENFRQKLEQCQIKMQEGEDLSQVLLEMEVFSGIYARMASIGSKAGVLDEVMSDI ADRYQEEIDQRFTNIIATLEPTLVIILSLIVGMILLSVMLPLMGIMSSI >gi|224461045|gb|GG657759.1| GENE 2340 2465630 - 2465968 356 112 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2055 NR:ns ## KEGG: bpr_I2055 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 18 106 22 110 115 88 43.0 9e-17 MKQRFVSNKTGSNNRNFIVSIIVFFIIFGCFSFGISTFSDKASEQEKQTLETAVNRGIAH CYAIEGAYPESLRYLEEHYGLIYDEDRFFIDYQILGSNIMPDVTIIDKEDRQ >gi|224461045|gb|GG657759.1| GENE 2341 2465965 - 2466450 435 161 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2056 NR:ns ## KEGG: bpr_I2056 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 160 1 161 161 92 31.0 5e-18 MKFQTRQRHVIDLIFPIALFFVFAASSLAVLLLAANLYGSTTGQIQANDQNRTCLSYIAE KIRQNDSDRAVSIQSIDDTECLALRGNYNGVACTTYIYELDGSLKELFINDGVDISLKNG KTIMEIERLRMDETGDGIFHFASTDKKGNEDSLIISERSEL >gi|224461045|gb|GG657759.1| GENE 2342 2466447 - 2466884 290 145 aa, chain + ## HITS:1 COG:no KEGG:bpr_I2057 NR:ns ## KEGG: bpr_I2057 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 113 1 123 179 61 34.0 1e-08 MKKQASNRSGLLLMEIIIAILFFSVISAICLQLFVKSHTLSRDTEVLDSAVNETSSAAEL LHSTEDAESALREYYPALKKEDSRLYIYYDEAFKACAETDAVYYMEIKKESAENGIFEYK LTVNKSGSSSHIYEMEYVTYEPLKP >gi|224461045|gb|GG657759.1| GENE 2343 2466898 - 2467377 331 159 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1530 NR:ns ## KEGG: EUBREC_1530 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 158 2 167 170 79 30.0 5e-14 MKKKTYPVTNIGSVSLLMVFIILCLVTFATLSLSSAAGDYQYSRDTARHNTEYYNACNKA TLRLKEIDKLLDAAYTGRPDDYYAEAAKALDTMDGITSDFSSEEPYLSFEEKIDDKKALK VVIILNGTDRISGGFYRIRSWQEISTAGWEGNDRLKLIE >gi|224461045|gb|GG657759.1| GENE 2344 2467390 - 2468448 1010 352 aa, chain + ## HITS:1 COG:aq_745 KEGG:ns NR:ns ## COG: aq_745 COG2805 # Protein_GI_number: 15606134 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Aquifex aeolicus # 5 352 17 363 366 304 45.0 2e-82 MNATDFFENAIEKKASDLFIIAGLPASMRVNNTIVRINSDRLLPGDTEELLCQIYKLAGE RSMNKLLETGDDDFSFAIAGLSRFRVSAYKQRGALSAVIRIITFTLPDPASLGITDSIMK LDRFPKGLVLVTGPAGSGKSTTLACMIDDINHNFEKHIITLEDPLEYLHRHDKSIVSQRE INVDTDSYVAALRAALRQSPDVILLGEMRDYETTQVAMTAAETGHLIFSTLHTIGSANTI DRIIDVFPPNQQRQIAVQLSMVLQAVVSQQLVPAVDGRMVPAFEIMTVTPAIRNMIRDNK IPQIDGIIYSSANDDMIAMDTSLLRLFKAGTITEETALTFATNPDMLSKKLK >gi|224461045|gb|GG657759.1| GENE 2345 2468501 - 2469001 526 166 aa, chain - ## HITS:1 COG:no KEGG:Ethha_1177 NR:ns ## KEGG: Ethha_1177 # Name: not_defined # Def: transcriptional regulator, SARP family # Organism: E.harbinense # Pathway: not_defined # 25 161 265 398 402 73 34.0 3e-12 MEKDRITKTPELRRGECEDDAYVCSDMEIISRELAEEGEIKGAYLQDYMSFRQIYRFVAR GLERSKDSAYILLLTLDDQENGSPVLPEDKEELMELLYQVIKSELRSGDAFTQYSSSQYL LMVLSTSGENAVKIGERIRQGFNKVVSYQFELKLNIDSYPMHKVNH >gi|224461045|gb|GG657759.1| GENE 2346 2469162 - 2469812 446 216 aa, chain - ## HITS:1 COG:no KEGG:Shel_26010 NR:ns ## KEGG: Shel_26010 # Name: not_defined # Def: PAP2 superfamily protein # Organism: S.heliotrinireducens # Pathway: not_defined # 14 208 4 198 216 195 52.0 9e-49 MKKSNKKNFIIAGGLFLFFLLWTVAVQYVDVQAVGPKDSEVGFATFNGFFHNLTGTHMLI YTITDWLGLIPVFVVLGFAILGLVQLIKRKNLLKVDCDILALGGFYIIVFIAYILFEVYA INYRPVLINGYLEASYPSSTTLLVMSVMPTAILQMNRRIKNEKVRKVVKYTILLFTLLMV IARSISGVHWFTDIIGGVLLSTSLVMLYYSIIKSYE >gi|224461045|gb|GG657759.1| GENE 2347 2469992 - 2470105 67 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWGIDVGTSKLYNTLMDSNKKQIIFRLECIGDVIFYA >gi|224461045|gb|GG657759.1| GENE 2348 2470826 - 2471407 214 193 aa, chain - ## HITS:1 COG:Rv2437 KEGG:ns NR:ns ## COG: Rv2437 COG2020 # Protein_GI_number: 15609574 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative protein-S-isoprenylcysteine methyltransferase # Organism: Mycobacterium tuberculosis H37Rv # 77 189 20 132 139 59 30.0 3e-09 MEFQLIAIVVLVSFYGCYIVKMICQKKKGIQTDQIGKGKAGFVKLVEVTMKISAFLVFAA GIVCIFLDVNYSPVPFRIAGAVVSIAGTAVFIAAVLTMRDNWRAGVAQTDKTDLVTGGIY QFSRNPAFLGFDLLYIGILLMFFNWVLFVVSVFAILMYHLQIVNVEEEFLLTTFGDEYVQ YKKKVCRYIGKIR >gi|224461045|gb|GG657759.1| GENE 2349 2471456 - 2471920 312 154 aa, chain - ## HITS:1 COG:CAC0547 KEGG:ns NR:ns ## COG: CAC0547 COG0346 # Protein_GI_number: 15893837 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Clostridium acetobutylicum # 1 153 1 155 159 121 41.0 5e-28 MKHTCMVISVADIKAARKFYEDLFGLELYQDYGINISFTCGLSLQQDFHWLVNLPEECIL RKSNNIEICFEEQDFDDFLNKLKTYSNIEYLSEVIEHEWGQRVIRFYDLDGHIIEVGEDM KMVINRFLASGMTMEDVSVKMDASIEDLTKLLNS >gi|224461045|gb|GG657759.1| GENE 2350 2471952 - 2472776 -131 274 aa, chain - ## HITS:1 COG:CAC0073 KEGG:ns NR:ns ## COG: CAC0073 COG1357 # Protein_GI_number: 15893370 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Clostridium acetobutylicum # 8 273 3 268 270 226 41.0 3e-59 MMIHERNDKIWDHMKADCSKCSGLCCTALFFSKTDGFPKDKAAGQPCTNLLNDYRCKIHS QLEKQKMKGCIGYDCFGAGQQVTQVIYQGQTWNDIPDRSTEIFAVFINVFKLYQIRYYLI EAASLISAQPLKESIQCLIEENIKMCHYSPESILSLDLEQYRQRSNHILKQVCKLLQQSL HSEDKKVPANFLGGNFKGRDMSGANLSSKLLIAANFEKCLFHGTIFLGADTRDTNFNNAD LSEAVFLTQGQVNSAKGNRNTKLPCHLDYPSTWK >gi|224461045|gb|GG657759.1| GENE 2351 2472870 - 2473625 393 251 aa, chain - ## HITS:1 COG:BS_ycgJ KEGG:ns NR:ns ## COG: BS_ycgJ COG0500 # Protein_GI_number: 16077385 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Bacillus subtilis # 45 182 12 148 228 87 31.0 2e-17 MDIENSIMATKQGFEDSFSLGDYYNKQTQDEHHLKNILDFLPFSADMKILDLGTGSGYLS FPIAKKYPNISIIGLDIVEKALEVNRFKANEENVQNISFITYDGVNFPFADNEFDMVISR YALHHFPDIQKSISEISRVIKSDGFLFISDPTPNVNDTSRFVDGYMQQKKDGHIKFYTKD EWLQICGKYGLRFKKSFDSTIRFPKKKDTAYGFDELLKKHDKEIIESYELEVVGNEIYIT ERVNNILFCKR >gi|224461045|gb|GG657759.1| GENE 2352 2473662 - 2474156 238 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229872047|ref|ZP_04491633.1| acetyltransferase, ribosomal protein N-acetylase [Spirosoma linguale DSM 74] # 3 164 2 165 167 96 33 6e-18 MRIETERLNIIALTPEQLELWTYNIRELEKELLCSYKAEPMEGLFREIVCGQVEKAQKDP ANYLWHTFWFIVKKSDRCVVGSIDFKDVPNSDGEVEIGYGLGRNFEHNGYMTETVQAFCN WAFKQDDVKHIIAETDIDGASSQRILIRCGFKEYARNDTIWWRL >gi|224461045|gb|GG657759.1| GENE 2353 2474273 - 2474635 168 120 aa, chain - ## HITS:1 COG:no KEGG:ELI_1514 NR:ns ## KEGG: ELI_1514 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 120 1 120 120 205 81.0 6e-52 MITGYYCTNIFSKQAKELIRFYREILEIPFIKTDVDESNGVYLGFIENAPTLCIWDCKVF DAQPTGHQSFVFQTDNLDLTMECLKKKGVDLSEAIRYDWGTYEVRLNDIDGNEIVISEFV >gi|224461045|gb|GG657759.1| GENE 2354 2474667 - 2475452 227 261 aa, chain - ## HITS:1 COG:PA3882 KEGG:ns NR:ns ## COG: PA3882 COG0500 # Protein_GI_number: 15599077 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 12 171 5 158 249 69 28.0 7e-12 MEITDKNIDGGKAFDWGKTSSDYAKFRDIYPQEFYDKIISRKLCINGQKVLDMGTGTGVL PRNMYHYGAKWIGTDISVNQIEQAKILSEGMDIDYYALSAEDVNFPDESFDVITACQCFW YFNHEETVSKFYRMLKPDGRILVLYMAWLPYEDKIAGASEKLVLKYSPMWSGAGETIHPI CIPDCYDEKFELVYHEEYPLYVHFTRESWNGRMKACRGIGASLTEEEIAMWEQEHMKLLT ENSFAEFDVLHYGAVAELKKK >gi|224461045|gb|GG657759.1| GENE 2355 2475471 - 2475794 242 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570301|ref|ZP_03779326.1| ## NR: gi|225570301|ref|ZP_03779326.1| hypothetical protein CLOHYLEM_06397 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06397 [Clostridium hylemonae DSM 15053] # 1 107 1 107 107 149 100.0 6e-35 MTTFICFAIAMVFIYVMRLFTGGFNITELLSFLLMIVLLGSHVYLSTRKKAVYGIVIPIF IIASFYPVYKMMNPAGTTFLVLTVSYMIALGSCIYIWYKARKTITDF >gi|224461045|gb|GG657759.1| GENE 2356 2475981 - 2476067 67 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEINSVTNQNIRGNGMELDDITSCFGS >gi|224461045|gb|GG657759.1| GENE 2357 2476290 - 2478914 1644 874 aa, chain - ## HITS:1 COG:CAC0454 KEGG:ns NR:ns ## COG: CAC0454 COG0577 # Protein_GI_number: 15893745 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 12 873 7 832 832 116 22.0 2e-25 MRNNNRKVVIKLSNRNLKSNRMRNIFAVGAITLTCILFTVLSSIGVGMIQVSQEQIMREV GGKFHASLEGTLKEEMESITEDPRVKEFSWNIYVGHVENILKRNGEIRYTSSKKELENSF ISLKEGKMPKNEDDIIIDTFILDELKLPHELGVKVPLTFYFQGEKIEKTFKVCGWYEGDG VSHASQLYISKNYWKKLKGDKTGNDFKEWARKHPEDSNVGVYTVGLFFDSTKNIESTVQS IIKDAGYEPGGQVKDSVNWAYIQNRAEKVEPGTLFLMAGALAVIILTGYLIIYNIFQISI LQDIRFYALLKTIGTTKKQIKFLIRRQAFLLSLAGIPIGLAVGYGISKVLFPAALSMLDF KDMEISLHFHPAIVLFAAGFSLFTVAVSCRRPGKIAGSVSPVEAVRYTERGKKRKKAKKT ESGAKIHAMALSNLGRNKKKTVFAILSMSLSVVLLSMVLTAMGSFQLDSYLKSRLLGDLT AANINYTSSSRSSDFTVEADYVDMLDSQPGILSRSEMWTNSGLDCVYLGEKEQMKYQELD DKGLLRKGNEINAAVLNKRLDSGLMPGNRYAYNEALLMNLKIMEGELDIEKFRQGGYVLA TSFLGNKTVSLYEPGDKVTLGFITDKSVPREIKNEDGQQIDVIYENQRMLQYEVMAVIEV PSSMDKRIYNVDGVDFVLPMEDMKENTLNPTRFAVSYELEKDAIINFEAAAKNYTENVNP YMGYLSKRQLKEEFSGLLSGISVLGIVMSGVIAFIGILNFINSTITGIFSRKQEFAVLCS IGMTKEQLKKMLLVEGLYYVLIASGISVVLGSALSWAVLRALNQFILFFDYQYNPWAFLI MIPIFTTIACVVPVVGFTRVGRESIVERLRNTQS >gi|224461045|gb|GG657759.1| GENE 2358 2478926 - 2479597 196 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 20 222 25 240 563 80 29 4e-13 MEILKTTGLKKYYGSGASLVKALDGVDIAIKEGEFTAVVGTSGSGKSTLLHMLGGLEYAT SGSVTVAGKEIFKLNETDLTIFRRRNIGFIFQNYNLVPVLNVYENIVLPIELDGEKPDKE FILDVMGMLGLMEKKNSLPSQLSGGQQQRVAIARALSSKPAIILADEPTGNLDSKTTQEV SGLLKLTGDQFKQTIVMITHNETLAQLCDRVIRIEDGKIVKDQ >gi|224461045|gb|GG657759.1| GENE 2359 2479837 - 2479908 57 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSIMPDIKLKNNKSPFTGLKNK >gi|224461045|gb|GG657759.1| GENE 2360 2479871 - 2480239 252 122 aa, chain - ## HITS:1 COG:MA2818 KEGG:ns NR:ns ## COG: MA2818 COG3603 # Protein_GI_number: 20091642 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 10 122 15 133 135 89 37.0 2e-18 MEIKKIHYEFSVCKVTDYSLVKFDSEYSFISKTDEENSLVCITKDVPSNTTRRDDGWKAF RIQGMLDFSLIGILSKISGILAENKIGIFAISTFNTDYVLTKRENYERALDVLNHAGYKI EE >gi|224461045|gb|GG657759.1| GENE 2361 2480274 - 2481335 337 353 aa, chain - ## HITS:1 COG:all2673 KEGG:ns NR:ns ## COG: all2673 COG0477 # Protein_GI_number: 17230165 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 1 352 70 421 437 139 28.0 8e-33 MLVSDTIAAFCSVIVFALSMRGELQIWNIYLVNFITGFMNAFQGPASTVVIGKIVPKGKI KQVSGMNSFSGNLVTVISPVLAASLFSFGGLPLIIIVDLASFSCAFVVLVFVLSIPEENK TKKDKFTMFSGSREGFVYLRSNHGIFMIILTMALLNFLSRLTYENILSPMILARSGNNYD ILGLVNAAMGVGGIAGGIIVSSGRVKGNSIKMIYVSAMLSFLFGDVMMGLGRTRIVWSLA AVAASLPIAFINAGQMDLLYRNVPEEMQGRIFAARNALQFSTIPAGILMGGCLADYVLEP LMRTDTAPVKMLQHIVGTGAGSGMALMFLCTGLAGAVFSIISYQNKEIRRLKL >gi|224461045|gb|GG657759.1| GENE 2362 2481686 - 2482171 120 161 aa, chain - ## HITS:1 COG:no KEGG:Sgly_1223 NR:ns ## KEGG: Sgly_1223 # Name: not_defined # Def: isochorismatase hydrolase # Organism: S.glycolicus # Pathway: not_defined # 2 159 3 162 163 226 74.0 2e-58 MKKALVVIDIQNDITKNYKEIIDNINALIDWAVSNNIYIVYIRHENLSAGTRTFKPNTHG AELASDLKIVSANVFTKSKGNALTSEGFVNFINEISNFYIAGADAVACVKSTCYNLRKAN YDVNVLSDCITSYDKRKIVEMLHYYESKGCKLLRLHDLIDS >gi|224461045|gb|GG657759.1| GENE 2363 2482308 - 2483255 400 315 aa, chain - ## HITS:1 COG:CAC0451 KEGG:ns NR:ns ## COG: CAC0451 COG0642 # Protein_GI_number: 15893742 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 54 305 161 413 416 142 31.0 8e-34 MTEKWMVVLSIGIAVVSVLASAGTVIYYICSIKKMEKVLDNFQKDKTQNLTITKETRESK LVSRLNRLLGNVSRNQEQALEERDQVASLVSDLSHQLKTPLSNILMYTELLGEEGLSPQE KQEFLRETRMQTEKMQWLMKTLMKASRLEQGIISFPVNCTGIRKTVAMAVGGIYARASEK KITIETSGLKEYVLYHNSKWTAEALENILENAVKYSPEGSVITIGLYPMEFYARVDIQDQ GLGIEEKEYNDIFKRFYRGKQVEQQEGSGLGLYLAQLILNREKGYITVTSSPGRGSCFHV YLLNEISAKKTIMRQ >gi|224461045|gb|GG657759.1| GENE 2364 2483248 - 2483934 115 228 aa, chain - ## HITS:1 COG:CAC0450 KEGG:ns NR:ns ## COG: CAC0450 COG0745 # Protein_GI_number: 15893741 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 223 3 222 227 161 40.0 1e-39 MRILIIEDDGGLSRGITFTMEREGYKVECCSGYKQGLAKVQKTPPELILLDWNLPDGDGL DLCKKIREFSHVPILMITARDMEMDEVMCLECGADDYIAKPFSLAVLKARVSALSRRYVL KTGSKRLLVSGDISIDGAEMKAYKGDRALDLSLTEFRLLKYFLENKNQVLLKEQILEYVW DMGGTFVEENTLTVNIGRLRRKLETNSSSTEYIKTIHGMGYLWEECHD >gi|224461045|gb|GG657759.1| GENE 2365 2484510 - 2485385 786 291 aa, chain - ## HITS:1 COG:no KEGG:Closa_4282 NR:ns ## KEGG: Closa_4282 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 291 1 290 295 249 42.0 7e-65 MHKYLRAIGYGNITSKRQLNEFLKKAEDTFTHHELVEVENELDFCEYQRECGAGIGVSVC GDMDINEHFERQYYYPYFIGSGLTSYADVVVERRMGEEAYVGICEDVKVGISLIFYLQNS VEFIKEKQIAGKKVKYGSVTLSGLCNKGTILLPVLKNAESEKKRQEESRNRMMLLSAAKS GDQAAMESLTLDDIDIYSKVSRRLITEDVFSIVDTCFMPFGIECDCYSILGEILEIHTIE NEDTKEQLYIMKLDVNELQFDICVPVKKVTGEPAVGRRFKGDIWLQGRINF >gi|224461045|gb|GG657759.1| GENE 2366 2485412 - 2486695 1147 427 aa, chain - ## HITS:1 COG:PH0710 KEGG:ns NR:ns ## COG: PH0710 COG0172 # Protein_GI_number: 14590588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Pyrococcus horikoshii # 1 419 6 444 460 332 41.0 8e-91 MLDIKFVRNNPDIVKENIKKKFQDDKLPLVDEVLQLDQKNRDIKQEVEALRADRNKISKQ IGACMAQGKKEEAEELKKKVQENADRVETLSAEEKQVEEKIKKIMMSIPNIIDPSVPIGK DDSENVEIQKYGEPVVPDFEIPYHTEIMENFNGIDLESAGKVAGNGFYYLMGDIARLHSA VITYARDFMIDRGFTYCIPPFMIRSNVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSMI GKFIDTMLSEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEESKT WYDKLWQNTVDLFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNLG DAQARRLGIRVKGTDSKYFAHTLNNTVVAPPRMLIAFLENNLQEDGSVRIPEVLQPYMGG MKKIEKK >gi|224461045|gb|GG657759.1| GENE 2367 2486724 - 2487266 677 180 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3933 NR:ns ## KEGG: Cphy_3933 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 169 2 168 170 135 45.0 9e-31 MESKILNALGIDPAFIFIFMLILFIVLFILYVNVTMKYNRLKSSYASFMRGKDGKTLEEG FKDKFAEIDTILKVTKQNRQDIREINKKMEGDYQKLGIIKYDAFNEMGGKLSFALAMLDG NNNGWVINAMHSREGCYTYIKEIVKGESYVELAEEEAEALDRAIFSESYDKEIKDIIDKD >gi|224461045|gb|GG657759.1| GENE 2368 2487273 - 2488193 838 306 aa, chain - ## HITS:1 COG:CAC3729 KEGG:ns NR:ns ## COG: CAC3729 COG1475 # Protein_GI_number: 15896960 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 8 299 3 281 283 238 49.0 1e-62 MEDNMAVKKKGLGKGLDSLIPDKPLKTTTTNTSTPLEDNKSDTGERTMKINMVEPNREQP RKNFEEDALLELADSIKQFGVLQPLLVRKRKDYFEIIAGERRWRAAKMAGIKEVPVIVKD YTEQEIVEISLIENIQRENLNPIEEAMAFKKLLEEFNLKQDEVAERVSKSRTAVTNSMRL LKLDEKVQQMIIDDMISTGHARALLAIDDHEQQYILANKIFDEKLSVRETEKLIKELKNP KKPKEKKIIENQFVYTDLAEKLKEVMGTKVSIASKGKGKGKIEIEYYSDSELERVFDLMM SVNKGE >gi|224461045|gb|GG657759.1| GENE 2369 2488199 - 2488960 693 253 aa, chain - ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 1 249 1 249 253 298 57.0 6e-81 MGRVIAIANQKGGVGKTTTAINLSACLAEKGQKVLAVDMDPQGNMTSGLGLDKETVEKTI YDLIIGEADVEEVLQKEALENLDILPTSIDLSAAEIELIGVEEKEFIVREAIKDIRDNYN FIIIDCPPSLSMLTINAMTTADTVLVPIQCEYYALEGLSQLIHTVELVKERLNPGLEIEG VVFTMYDARTNLSLQVVENVKDNLQQAIYKTIIPRNIRLAEAPSYGMPISQYDPKSAGSE SYMKLAEEVMNKK >gi|224461045|gb|GG657759.1| GENE 2370 2488966 - 2489160 92 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570316|ref|ZP_03779341.1| ## NR: gi|225570316|ref|ZP_03779341.1| hypothetical protein CLOHYLEM_06413 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06413 [Clostridium hylemonae DSM 15053] # 1 64 1 64 64 80 100.0 3e-14 MFHVKHFKTACHQIKHIQYNFDRHIIFNHIKFMYKNKNKMFHVKHLVDIITKRWYTKSMQ KTER >gi|224461045|gb|GG657759.1| GENE 2371 2489637 - 2490260 224 207 aa, chain + ## HITS:1 COG:no KEGG:Closa_4292 NR:ns ## KEGG: Closa_4292 # Name: not_defined # Def: alpha/beta hydrolase fold protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 203 114 315 316 138 35.0 1e-31 MYVQLITDFIKHVIGDKTDVIATGESGSFVLAACQNDSSIIDQIVLVNPASIELLGKIPT KRSKCLSWFINTPILGTFVYNMLTKRKDIEALFQMDYFDDFDNIDDDIIRTYYESAHSGN ASSKYLLASILGYYTTINIPHCLESLSNSIYIVAGKSNQDNIDFANDYKDILPSIEIVEM DNTKYLPQLEKPDEFLEQLNILLSSGE >gi|224461045|gb|GG657759.1| GENE 2372 2490332 - 2491045 562 237 aa, chain - ## HITS:1 COG:L180469 KEGG:ns NR:ns ## COG: L180469 COG0357 # Protein_GI_number: 15673325 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Lactococcus lactis # 7 237 8 238 238 219 45.0 3e-57 MSKILKTKLQELNISINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSL VKAIEIDKIHSVIDIGTGAGFPGIPLKIAFPHLNITLLDSLNKRIRFLDTVIERTGLKDI RTIHGRAEDYAKQKEYREMYDLCVSRAVANLATLSEYCIPYIRIGGIFISYKSGDVENEK EDSRNAAALLGGRIKDTVKFQLPGTDIGRSFVIIEKERQTAKRYPRKAGLPSKEPLK >gi|224461045|gb|GG657759.1| GENE 2373 2491056 - 2492957 1265 633 aa, chain - ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 14 632 8 620 626 794 62.0 0 MKYSANSVWENNDEYDVVVVGAGHAGCEAALAAARLGFCTIVFTVSVDSIALMPCNPNIG GSSKGHLVREIDALGGEMGKVIDKTFIQSKMLNKSKGPAVHSLRAQADKLHYSRTMRQVL ENQDRLEIKQAEVVNILTEDNKVIGVQTYSGAVYRCRAVILCTGTYLKSRCIYGDISQNT GPNGLQAANYLTECLKELGIRMYRFKTGTPARIDKNTVDFSKMEEQFGDERIVPFSFTTD PEDIQIDQVSCWLTYTNKKTHDIIRANLDRSPLYSGMIEGTGPRYCPSIEDKVVKFADKD RHQVFIEPEGLETNEMYIGGMSSSLPEDVQYAMYRTVPGLENVKIVRNAYAIEYDCIDAR QLKPSLEFRNIKGLFSGGQFNGSSGYEEAAAQGLVAGINAARMLQGKEPLVIDRSQAYIG VLIDDLVTKESREPYRMMTSRAEYRLLLRQDNADRRLTKLGYEAGLIEKERYEHFLMKEK WITEEIERVNHVNVGANEQVQDILREYDSTPLNSGTTLAELIRRPELSYEALRPIDKKRP VFPEGLEEEIIEQVNISIKYDGYIKRQEKQVEQFKKLEKRKIPENIDYDDIKSLRIEAVQ KLKEYRPVSIGQASRISGVSPADISVLLVYLNA >gi|224461045|gb|GG657759.1| GENE 2374 2492923 - 2494338 1042 471 aa, chain - ## HITS:1 COG:BS_thdF KEGG:ns NR:ns ## COG: BS_thdF COG0486 # Protein_GI_number: 16081154 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 5 471 3 459 459 394 43.0 1e-109 MKTQTIAAISTAMSDSGIGIVRMSGGKAFMIADRIYEGKNGKKLAAQKSHTIHYGYIKDG EETIDEVLVMLMRGPHSYTGEDTVEVNCHGGVYLVRRVLELMIKNGARPAEPGEFTKRAF LNGRLDLSQAEAVGDLIASQNEYALKSSVSQLKGNVKSKINDIRNKIIYHTAFIETALDD PEHISVDGYGEELRSAVNELLLEINKLLSTCDNGRIIKEGIKTVIVGRPNAGKSSLLNVL VGEERAIVTEVAGTTRDILEEHINLQGISLNIIDTAGIRETDDIVEKIGVDKAKMYADEA DLILYVIDASAPLDENDRQILKMIYGKPAIILLNKTDLDMIITKEKIKDVYNASNPANNN ISKSKEIQVIEVSAKNQNGIADFEEAVKNMFFEGNLSFNDEIYITNVRHKAALQDAGGSL QKVIDSIDMGMPEDFYSIDLLDAYKSLGDITGDTMGEDLINEIFSKFCMGK >gi|224461045|gb|GG657759.1| GENE 2375 2494451 - 2495263 658 270 aa, chain - ## HITS:1 COG:CAC3735 KEGG:ns NR:ns ## COG: CAC3735 COG1847 # Protein_GI_number: 15896966 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Clostridium acetobutylicum # 153 267 90 206 209 122 63.0 1e-27 MEFITVSAKTLDDAITEALIQLGVTSDQLDYEVIEKGSAGFLGIGMKQAVIKARKKIIQP VKEEPAKEESFKEVKRAEPVKKEKPAAKKEFKKENTPVKVKEEKTAAEKKETDLANVEPE TIAACEKFIYDVLQAMSMEGVKVTSEVDEEGALSIDMEGKNMGILIGKRGQTLDSLQYLT NRVANKMQDGYVRVKLDTEDYRRRRKETLENLAKNIASKVKRTRRTVSLEPMNPYERRII HSALQADPAVSTHSEGEEPYRRVVVTLVRK >gi|224461045|gb|GG657759.1| GENE 2376 2495276 - 2496346 683 356 aa, chain - ## HITS:1 COG:BH1169 KEGG:ns NR:ns ## COG: BH1169 COG0706 # Protein_GI_number: 15613732 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Bacillus halodurans # 26 280 45 276 280 110 31.0 5e-24 MTAATLLTAANWPIVGQIAWLLGKVMNFIYTVLDNILPSDNGLIGLSIIFYTIIVYTIML PLTVKQQKTAKMSSVMNPEIQAIQKKYKNKKDQASMMKQQEEVQQVYDKYGTSMTGGCLP LLIQMPLLFALYPVIYDMQRYVPAIKGAATSVNKFITIPDLTMAPIQMIKESGSFGIAPA VVIITAILLPVLSGLTQYLSIKLSQNISGQQMDKDNPMAGTMKTMNMTMPIFSVFMVFTL SSGIGLYWIVSAVVRCVQQVLINKHLSKTSVEDIIEKNKEKAAEKRQKRGEKAEKINMMA QTNTRTLKDSANRGTSGLTEKEREEKVTKARDNAGNAKEGSLASKANMVKKFNKND >gi|224461045|gb|GG657759.1| GENE 2377 2496385 - 2496597 97 70 aa, chain - ## HITS:1 COG:CAC3737 KEGG:ns NR:ns ## COG: CAC3737 COG0759 # Protein_GI_number: 15896968 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 69 2 70 71 94 69.0 4e-20 MKKILLGCIRFYRKYLSGLKRYSTCIYYPTCSQYAVEAIEKYGAWKGSRLAIWRILRCNP FAKGGYDPVP >gi|224461045|gb|GG657759.1| GENE 2378 2496612 - 2496965 272 117 aa, chain - ## HITS:1 COG:CAC3738 KEGG:ns NR:ns ## COG: CAC3738 COG0594 # Protein_GI_number: 15896969 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Clostridium acetobutylicum # 7 103 6 104 119 80 48.0 6e-16 MKFSESLKKNKDFQTVYNKGISYANKYLVMYVMENHTERNRLGISVSKKVGNSVVRHRLT RLIRESYRLQEDRFRCGLDIIVIARIGAKGKNYKEIVSALLHLGHLHEIIDEGNDSR >gi|224461045|gb|GG657759.1| GENE 2379 2497015 - 2497149 192 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|160882064|ref|YP_001561032.1| ribosomal protein L34 [Clostridium phytofermentans ISDg] # 1 44 1 44 44 78 86 1e-12 MKMTFQPKKRQRAKVHGFRSRMSTAGGRKVLASRRAKGRKRLSA >gi|224461045|gb|GG657759.1| GENE 2380 2497543 - 2498931 1392 462 aa, chain + ## HITS:1 COG:CAC0001 KEGG:ns NR:ns ## COG: CAC0001 COG0593 # Protein_GI_number: 15893299 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Clostridium acetobutylicum # 4 461 5 445 446 416 50.0 1e-116 MNIVKEKWQEIIEHLRIEHELSNVSFSTWIQPLKVYDVIDSTVFILVNMNASVEYIEKKY LLPLKVCIAEITGTEYEIVFLSEDDDRIDEIQNMAIEASQKKKTKSAAEKAGLNPKYTFD TFVVGGNNNFAHAASLAVAESPGEVYNPLFLYGGVGLGKTHLMHSIAHFILEKSPKKKVL YVTSETFTNELIDALKNGKTAGNESAMSKFRDKYRNNDVLLIDDIQFIIGKESTQEEFFH TFNHLHTSGKQIIISSDKPPKDIETLEARLRTRFEWGLIADISAPNYETRMAILQKKIEL DKLEKYNIPQDVIEYIATNIKTNIRELEGSLNKLIALYKLNNNATQIDITLASEALKDII SSKNNREVTPELILDIVSEHFGVSIADLKSNKRNADISNPRQIAMYLIRSMTDTPLKSIG IFLGGKDHSTVKHGVDKITKEVTTDETLSNTVSIIKKKINPA >gi|224461045|gb|GG657759.1| GENE 2381 2498956 - 2499084 62 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDISYYRNKIVNYEKVIQTTSTYKPVTFHTVLKCRNIDSQRA >gi|224461045|gb|GG657759.1| GENE 2382 2499179 - 2500285 1209 368 aa, chain + ## HITS:1 COG:CAC0002 KEGG:ns NR:ns ## COG: CAC0002 COG0592 # Protein_GI_number: 15893300 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Clostridium acetobutylicum # 1 363 1 361 366 249 41.0 5e-66 MKIICSKSNLVKGVSIVSKAVPSKTTMPILECILIDATADIIKLTANDMELGIQTEIEGE ITERGMIAIDARIFSEIVRKLPDSDIVIETDANLQTVITCEKAKFDLSGKPGEEFSYLPI IEKEESIEISQFTLKEVIRQTIFSIADTESNKLMTGELFEIKDNILRVVSLDGHRISIRK IELKNEVADKKLVVPGKTLTEVSKILSGEAESMVNISYTNNHIVFEFDNTIVVSRLIEGE YFKIDQMLSSDYETKVRINKKELLNCIDRATLLVKEGDKKPIIINIGDEIMELKIKSQIG SMNEEIMIEKEGKDLLIGFNPKFLIDALRVIDDEEATLYLMNAKAPCFIKDDAESYIYLI LPVNFNAA >gi|224461045|gb|GG657759.1| GENE 2383 2500321 - 2500530 268 69 aa, chain + ## HITS:1 COG:Cgl0147 KEGG:ns NR:ns ## COG: Cgl0147 COG2501 # Protein_GI_number: 19551397 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 2 61 4 63 97 57 53.0 4e-09 MQNIKLREEFIKLGQALKAAGLVDSGVEAKEVIQDGLVKVNGETDTRRGRKLHAGDVVSF GGEEIKIED >gi|224461045|gb|GG657759.1| GENE 2384 2500535 - 2501605 706 356 aa, chain + ## HITS:1 COG:BH0004 KEGG:ns NR:ns ## COG: BH0004 COG1195 # Protein_GI_number: 15612567 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Bacillus halodurans # 1 355 6 370 371 273 40.0 4e-73 MKLKSFRNYDFLKLEFDNATNIFYGDNAQGKTNILESVYLSGTTKSHRGTKDRDLVQFGK EESHIETVVEKNGITYQIDMHLKKNSPKGIAINKIPIRKASELFGIINIVFFSPEDLNII KNGPSERRRFIDLELSQLDKVYLNNLSNYNRIVNQRNHLLKDITQQRNLMETLDVWEIQL IQYGNKIIERRKQFVKEINKIISNIHKKLTGEKEEINLIYEPSVGNLTFEQALAKNRERD MRIKSTSVGPHRDDICFMVGDLDIRRFGSQGQQRTAALSLKLSEIELVKQSIHDTPVLLL DDVLSELDKHRQNYLLDSIHDIQTLITCTGVDEFVNHRFSINKVFHVQDGQVAKEN >gi|224461045|gb|GG657759.1| GENE 2385 2501616 - 2503550 1979 644 aa, chain + ## HITS:1 COG:CAC0006 KEGG:ns NR:ns ## COG: CAC0006 COG0187 # Protein_GI_number: 15893304 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Clostridium acetobutylicum # 10 644 8 637 637 806 63.0 0 MSTEKVQHEYGADEIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGFC DTIYVTINQDNSVTVVDNGRGIPVGINSKAGLPAVEVVFTILHAGGKFGGGGYKVSGGLH GVGASVVNALSNWLEVEIYSEGKVYMQRYERGKVAKKLAVIGECGSDKTGTKVTFLPDDT IFEETVFEYDVLKQRFREMAFLTKGLKIVLRDDRPEDEPVEKTFHYEGGIKQFVEYLNRS KTPLYESIIYCEGLVNNVAVEVAMQHNDSYSDNTYGFVNNITTPEGGTHIVGFRNALTKT FNDYARKNKLLKDSEPNLSGEDIREGLTAIISVKIEDPQFEGQTKQKLGNSEARGAVDSV VSSQLEIFLEQNPSVAKMTVEKSVMAQRAREAARKARDLTRRKSALDSMSLPGKLADCSD KDPKNCEIYIVEGDSAGGSAKTARDRGTQAILPLRGKILNVEKARLDKIYANAEIKAMIT AFGTGIHDDFDISKLRYHKIIIMTDADVDGAHISTLLLTFLYRFMPDLIKEGYVYLAQPP LYKLEKNKKVWYAYSDEELDTILREVGRDGSNKIQRYKGLGEMDAGQLWETTMDPEHRIL LRVTMDDETTSELDLTFTTLMGDKVEPRREFIEENAKYVQNLDV >gi|224461045|gb|GG657759.1| GENE 2386 2503561 - 2506062 2929 833 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 8 833 6 830 830 932 58.0 0 MEDNIFDKVHEVDLKKTMETSYIDYAMSVIASRALPDVRDGLKPVQRRILYSMIELNNGP DKPHRKCARIVGDTMGKYHPHGDSSIYGALVNMAQEWSTRYPLVDGHGNFGSVDGDGAAA MRYTEARLSKISMELTADINKDTVDFIPNFDETEKEPVVLPARFPNLLVNGTSGIAVGMA TNIPPHNLAEVINAVVKIIDDQIEENEETTIEDILKIIKGPDFPTGGMILGTRGIEEAYR TGRGKVRVRAVTDIETMPNGKSRIIVSELPYMVNKARLIEKIAELVRDKKIDGITDLSDQ SNREGMRVCIELRRDANANVILNQLYKHTQLQDTFGVIMLSLINNEPRVMNLLDMLNYYL EHQEEVVTRRTKYELNKAEERAHILEGLLIALDNIDEVIRIIRGSDNVQAAKAELMERFG LSDVQSQAIVDMRLRALTGLEREKLENEYKELMEKIGELKAILADRKLLLGVIKEEIIII RDKYGDERRTSIGFDEFDISMEDLIPRQDVVITMTKLGYIKRMSNDTFKAQHRGGKGIKG MQTLEEDYVEELFMTNTHHYIMFFTNTGRVYRLKAYEIPEASRTSRGTAIINLLQLMPEE KITAVIPIEEYKEGEYLFMSTKKGLVKKTPITDYANVRKTGLAAITLREEDELIEVKYTN NERDIILITKYGQCIRFNERDVRSTGRTSMGVRGMNLADRDEVIGMQLDSQGTHLLIVSE KGMGKRTGMDEFTSQNRGGKGVKCYKITEKTGNVVGVKAVDLDDEIMIINTGGIIIRMKC DNISSLGRVTSGVKLINLPDGETVASIAKVRKGDDEDEEEDTEEVQAENTSEE >gi|224461045|gb|GG657759.1| GENE 2387 2506161 - 2506898 531 245 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570331|ref|ZP_03779356.1| ## NR: gi|225570331|ref|ZP_03779356.1| hypothetical protein CLOHYLEM_06428 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06428 [Clostridium hylemonae DSM 15053] # 1 245 1 245 245 373 100.0 1e-102 MKKALKYQLSDLRIVFIVYFAILVFLYAIGSIGLNTVKVNFSSGSVSIGLSGAFVCLITG MVMFQEHFWMLIQNGFTRKIYFKSSLCTISILSIVFAIAEGLMSKLIELTFLSHRNIIVK TSIKMIFPSLHEKLDGGMGFILNIMLTAVMTACLFMVGYLLAGIFYRLPKQLKTPFAICL PVFLFVILPVLISIFPSIGNTFVRFLLTVMGISSQNMLLIFLFFAVLFGLLSAASYITVK RAEVN >gi|224461045|gb|GG657759.1| GENE 2388 2506911 - 2507759 786 282 aa, chain - ## HITS:1 COG:BH3493 KEGG:ns NR:ns ## COG: BH3493 COG1131 # Protein_GI_number: 15616055 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 4 280 5 282 283 169 31.0 8e-42 MNGIEIKDISKSFKDTKALTDVDLCLEEGKIYGLLGRNGAGKSTLLNIINNRIFADKGTV VLNGDRMEENEEILSQFFLVNENNLYPEGMKVKEAFFWAQKFYPDFDMDYARKLCAVFEL SLKKKIKNLSTGYQSIFKNVMALSVNVPYVFLDEPVLGLDAYHRDLFYRLLIEKYAEHPF TAVISTHLIEEVTNIVEQVIIIKNGKIIRNESRDAILNNGYCISGRASLVDSYVSGREII GEDVIGGLKTAYLLGKPDDMLPDGLELSAMDLQKLFIQLTGE >gi|224461045|gb|GG657759.1| GENE 2389 2507756 - 2508124 411 122 aa, chain - ## HITS:1 COG:BH3492 KEGG:ns NR:ns ## COG: BH3492 COG1725 # Protein_GI_number: 15616054 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 119 1 119 129 112 42.0 2e-25 MKQELDQEKPIFIQISETIEDGILTGAFREEEQIPSITEFSVNYKINPATALKGINLLVD ESILFKKRGVGMFVSKGAVQKLKDKRQSQFYDSYICKMIEEARRLGITSDDIIAMIERGY VK >gi|224461045|gb|GG657759.1| GENE 2390 2508346 - 2509929 1424 527 aa, chain + ## HITS:1 COG:BH2109 KEGG:ns NR:ns ## COG: BH2109 COG4753 # Protein_GI_number: 15614672 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 1 523 1 520 525 140 26.0 7e-33 MYKVIIADDEEKICVLLNSSILWEELELELCCICHDGLELKEAVERKKPDILITDICMPG MNAIELIKDMREKDNDAKILIVSGYRQFEYAREALKYGVDNYLLKPIDEEELNDALKKIC LEISVEKNEILSDDAEKIKDTLQSFFLQDIRNNSEIGRHMNLSDINQKYYADFKEGYFRV IYVKIDVDGKADEKFNLQIIQKKIREKCMSSISRIHNDTIVSFVQGGCIFTVNYDPEADA SIRQLAKNILEDARQAVSLFSGLNATVGVGNACGSVQNVRQSCESAVDAVIYRIISGTNK VYFSEDMELQYRDSYLGEDDKRSLIRIFELSNRELFRQKLEDIVRAERKNVLVLYKILEE CVQLFYDTLNRNRQEGSDNIIVGKEILYEMDNTLTVMDLVSVVEENICGLMKRMLDERKQ KGYKPIREAKEYVKKNYASKIKLEDVAGEVSLSPAYFSSVFSKEEGMTFVDWVNEYRIEM AKELLRKGDHTVAETCEMVGISNQRYFSKLFKSKVGVKPMEYRKLYN >gi|224461045|gb|GG657759.1| GENE 2391 2509975 - 2510907 908 310 aa, chain + ## HITS:1 COG:BH0792 KEGG:ns NR:ns ## COG: BH0792 COG2972 # Protein_GI_number: 15613355 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 79 301 364 573 587 132 35.0 1e-30 MNNLKILHIAGILSAGILFLEAAFKENADKWLCIILVCVIMAVLVLTVFQSKKVRGTLIK LYDEKGAGQDIKEEVLNNYEMELLQNQTTVIMLQSQINPHFLYNTLDCIRGEAVQIGAAE LASMTKALSNFFSYSISRSGLLVTISEELESVHNYFLIQQFRFNRRFHLTVNCDKEDTAI MENVIPRLALQPIIENSISHGFKSAVSDCELSITIFRTEDAVLIKCSDNGCGMSEQELED ITVNLENCVDYINDKIKEKSTHGLGIVNINRRIKLLFGSEYGLYISSMENAGTDVHIRLP LQNTGMEKGV >gi|224461045|gb|GG657759.1| GENE 2392 2510921 - 2512264 982 447 aa, chain + ## HITS:1 COG:SMb21344 KEGG:ns NR:ns ## COG: SMb21344 COG1129 # Protein_GI_number: 16264668 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 6 440 2 465 497 100 21.0 6e-21 MEKKEMLRFSGKSADYQGFCAVKHLYMELYESETAGILQRSDIEKNAVIGLILNETKAYY IGEQPSLIKEMTVADNLYTVRKGRGAKIYHKNAVYKEADRILREFNIDVDAGSLVEELPK TDIRKIELIKAYVQGYPLIVIRDLLMDYSKEDQKEFLRILTLLKERKQTFVITDYNIGVL MNVCDRIMIFENGRIGKTYLKEEFPLCRLHFKTSETVSAAPPQKSTGEERKEIFSVRGLT GQFLRNLSFCIYEGEIVSLSDLNKNERTELVYYLIGRKKIKNGAVRYKGSIYRPKSILHM KKQGINVLRMQILADSYVFHNLTVLENVYIGSIKKMSRAGVISKNFCNFVKCEFKSGFFS RKENWDKTGGELDETTKWHVYLKRLEMQNPAFLICEEIFAINDELVDKAIIEFLEHMKKN GTSVLILSSNNRNLSKVSDRELSRFGQ >gi|224461045|gb|GG657759.1| GENE 2393 2512488 - 2513462 1027 324 aa, chain + ## HITS:1 COG:BS_rbsB KEGG:ns NR:ns ## COG: BS_rbsB COG1879 # Protein_GI_number: 16080649 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 1 307 1 295 305 107 28.0 4e-23 MKKKLSLLMAAALAACLVMSGCSKGGGESETKKKGSDEEISIGVTVMTLANTIWAETCTA IEDNCKENGWKCTVVDCSSTAQTQITQVENFIQKGVDAIVINPTDQAALETVMKEAMDAG IKVISWDIDSDAADCCLLVDNYNVGYEIGKQAADWIEDNLDGKAEVCILDYPEAGAEVIK RADGINDAITELSPNSKVVAQVSHQGSTDGGMQAMENVLQSNPDCRVVCSVGDGGAMGAN EALKAAGIKGEEAGIFSADGTTEFLSKIAAGEPCKMSILLDDPLSKAASITDTLDKLLKD EKVEKDLYTNVQVIDESNLSEYYK >gi|224461045|gb|GG657759.1| GENE 2394 2513523 - 2515010 210 495 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 269 481 17 225 245 85 27 1e-14 MADKILEFRNIEKAFGGIKALSDVSIDIVRGEVHAIVGENGAGKSTLIKTCAGAYVPDAG KIVINGEEFERLSPSLSQEKGIGVIYQEFNLVNEMTVAENVFLGHAVRRGIIIDRQEMNK RAAEIFEQLNIDIDPEELVKNLSVGYQQITEIAKAISMNAKLLIMDEPSAPLTNAEVERM FQLVETLRDQGVTIIYISHRLEEIFRLSDRVTVLRDGQKVETRWTKETDTEQLIRLMVGR ELKNTFPERKPMFTEEKILELQDVTGNGLKDVSFSVRKGEILGLAGLVGAGRTELSHLIF GLVPLKEGKMYLDGKEYSPGNAREAISKGIALVPEDRKQHGVHVHLSIRENISMANLRAL SKASVLEKAKENKIVKEYGKTLNIKCASYEQQVRLLSGGNQQKVVLAKWLATEPELIILD EPTRGIDVGAKYEIYKIMCRLIEMGKTIIMISSEMEELLGMADRIIVLAEKRIAGEVERR DFTQEKIMKYASKEV >gi|224461045|gb|GG657759.1| GENE 2395 2515022 - 2515972 1179 316 aa, chain + ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 16 307 25 317 322 203 44.0 3e-52 MKVAKFQKYIRLYAMFIVLLILVIVFSVMTPAFLKSSNISSVLRQISMLGITAVGMMLPI LLGGIDLSVGAIITFVNIICAYMMVNKGWNAVAAVAVTLIISILIGMIDGIIIAKVNIPP LIMTFAMQMILEGASYVLSDGLPIYGFPEKFAVIGQGYIAFAPIPVIIMILCFAFGAFVL NKTYFGRFFYAVGGNEEASKLSGINVFSVKTLAYTLSGLFAGIAGIVMLSRTNSGTPNAG KGFEMDVLTAIVLGGVSINGGRGRIHNVIAGVLIIGVLQNGLILMNVGTYVQYIVKGIVL AAAVGYDCLQNLKKAN >gi|224461045|gb|GG657759.1| GENE 2396 2516028 - 2516705 703 225 aa, chain + ## HITS:1 COG:PM1362 KEGG:ns NR:ns ## COG: PM1362 COG1878 # Protein_GI_number: 15603227 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pasteurella multocida # 1 224 1 224 224 172 39.0 4e-43 MSYKFLSYKITKTSAVCPGAVRPVFEQTRHVTEGWAQNEWSITVPNHLGTHMDAPNHHYD GGIKIADLPMDRYVYEKPYIIDIPKGFNELITAEELKPYAEQIKQCDLLMLRTGHSRYHD TDEEIYGAKGPGVGSDAAEYLNKNFPNMRGIIMDFISLATYTDPDDGNKAHKWLLGEWSG HYSTIIEDATLEGLDNDTLVRVFSLPIRYGEVDSCQVSVLAEIRD >gi|224461045|gb|GG657759.1| GENE 2397 2516732 - 2518015 778 427 aa, chain + ## HITS:1 COG:HI1011 KEGG:ns NR:ns ## COG: HI1011 COG3395 # Protein_GI_number: 16272946 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 7 418 1 405 413 281 39.0 1e-75 METNKLLLGCIADDFTGAGDIASFLTRGGLRTILISGIPAAGDIPKDADAVVISLKSRTA PVREAVRDTLESIRSLETLGCERFYIKYCSTFDSTPHGNIGPVLDAVLEYLNETCTVLCP SLPVNGRTVKDGILYVDKIPLSKSSMKDHPLTPMWDSRIAVLMSGQSRYPCLELGRKYYS CTSEEAYDYIKSAAKGHSHYYIIPDYENEEDAAHIIRLFSDMRVMSGGSGLAAVLAGGLS AQRKDVHVRQMDIRAEGASLIVAGSISKATTGQIHFYKEQGLPYYKISPEQLWKRTETAS SIWNEIKQRLTGEHDSVLVYCSDSREDVKKGQELGGQKFAGLLEDTLAKLAAKAAEEGIY KIIAAGGETSGAVTKKLGYKAFYTAQSVAPGVPVLIPADSTDRRLILKSGNFGQEDFFIR ALEVTRA >gi|224461045|gb|GG657759.1| GENE 2398 2518056 - 2518649 391 197 aa, chain + ## HITS:1 COG:ygbL KEGG:ns NR:ns ## COG: ygbL COG0235 # Protein_GI_number: 16130645 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 190 7 194 212 130 36.0 2e-30 MEQSLETCFEEAVRAAGLLFDRNKVTGSTGNISFRYGGNMYISGNGTCFGWLGRSDFAVI DSSGRQLSDIKPSKEYPLHKIIYDAKPEIHAVIHTHSFYSTLVSCMADEQSRDVFSDITP YLRMKVGTIGMIPRAVPGSAELFDALAQRVHDSGGYLLADHGPLIGGTDIRSAFYGIEEI EETSKIHYYLQAIERRE >gi|224461045|gb|GG657759.1| GENE 2399 2518654 - 2519634 1050 326 aa, chain + ## HITS:1 COG:lin0070 KEGG:ns NR:ns ## COG: lin0070 COG1052 # Protein_GI_number: 16799148 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Listeria innocua # 32 314 30 313 318 206 41.0 7e-53 MAKLLVTGWIPEDIIGKYREQFEEIVLPDEKKTNYTVGEVSGMIGRFDVLFTISAFPFRD DLIEKAVNLKAVCNLGVGYDNIDVQACTERNICVINTPVSVCEPTAEFTIALMMSITRGT LMYDREVRETKRTASVCFFDRDIMLYGKTLGILGFGRIGQAAARKAKGLGMNIIYYDPYR KEDAEKEMDAVYCTFDEVLEKADVVSCHMPYTEENHHVIGAEAFRKMKKTAYFINVARGP IMDEPALVYAVKNKVIRGAATDVYENEPHISEEITKLNNIVLSPHIGSNVYEARRNMAWE ALDGSLSVLAHARPHNLVNTSLMGQI >gi|224461045|gb|GG657759.1| GENE 2400 2519706 - 2520530 635 274 aa, chain + ## HITS:1 COG:no KEGG:SpiBuddy_0718 NR:ns ## KEGG: SpiBuddy_0718 # Name: not_defined # Def: xylose isomerase # Organism: Spirochaeta_Buddy # Pathway: not_defined # 1 272 29 303 307 226 44.0 1e-57 MKCLRRIADDPFYEAVELTYISDPGLREEAGKMLKDSKMTTAYCAQPVILQNGLNLNSPV REERKRALLRMKECIDEACGLGAGSLSFLAGTFAEDAVEEAMEYLEESAGEMCSYAKGRL QIEIELFDYDVEKRSLIGPSERAVRLAEAVRKEHDNFWLLPDLSHIPQQHEMIEEALHNL LPYMRRTHIGNCVMEKGSPLYGDCHPPFSYSGSCIGKEELSEYLGILAHTGFLNESDRPV VSFEIKPLSDADIEDVLAENKKLLLQAMEMLKKE >gi|224461045|gb|GG657759.1| GENE 2401 2520570 - 2521319 721 249 aa, chain + ## HITS:1 COG:no KEGG:Isop_2964 NR:ns ## KEGG: Isop_2964 # Name: not_defined # Def: putative transferase protein # Organism: I.pallida # Pathway: not_defined # 3 205 8 212 242 122 35.0 2e-26 MGKLSHADLLELRRWNTPTIYNGWESVAERDRLSCCMSREEVQDYAPQMGAMTGYAVTVE YVCSDAKTKEENPDCYLKFYEYLAGIPGPKVIVAKDLDAPDMTGSIFGEVTGNAYKALGC VGCIDDGFVRDVDEAAYGGFKMMARRLGVSHTYSCPLRFGNEIEVFGAKVKPGMLIHADK YGFIAIPEEETEHLLEGVRFMDSNECQTTIPSARDTFGLTQEEVLAQLKEAQIKFSSNAA VFRDRILNE >gi|224461045|gb|GG657759.1| GENE 2402 2521354 - 2522361 1027 335 aa, chain + ## HITS:1 COG:mlr9018 KEGG:ns NR:ns ## COG: mlr9018 COG2376 # Protein_GI_number: 13488187 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 1 330 1 330 332 286 48.0 5e-77 MKKIMNSPETFEDDTLQGIIAAYGDKLGLLEENKRVLYSKYPADAHKVGIVTGGGSGHLP VFLGYVGQGLLDACAVGNVFASPSARTMADAITKADRGSGVLCLYGNYGGDRLNFDMACE MADMDGIKTETVIVSDDVASSPAEKADKRRGVAGMVYAFKIAGAAADQGMSLHETAEVTK RALSSVRTIGVALSPCIVPRVGTPGFSIADDEMEVGMGIHGEKGISVEKMMTADETAGKM FSALTEDMPLKRGDEISIMINGLGGTPLEEQFIVYRAVCRLAEQKGVVVIMPHIGEFATS MEMAGLSVTMIKLDKELKELLLRPAKSPFYTNCNK >gi|224461045|gb|GG657759.1| GENE 2403 2522377 - 2523006 585 209 aa, chain + ## HITS:1 COG:PM1648 KEGG:ns NR:ns ## COG: PM1648 COG2376 # Protein_GI_number: 15603513 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Pasteurella multocida # 12 204 32 226 228 89 33.0 3e-18 MQKESLNKAVDFISRKMDEKCLYLVELDQQNGDGDLGISMKEGFAAARHFLSNTDEKDLG RLMMGMSGTFNEAAPSSLGTILSIGMMGMAKALKGKEEVSVKETADAFRSGLEKIMEKAG SMPGEKTILDALYPASEALKEHASEEPAKAYESAAEAAKKGAESTRMMLSRHGRAAYYGE KSLGILDGGAAAGQLIFEAIKESVCSNSY >gi|224461045|gb|GG657759.1| GENE 2404 2523079 - 2525343 974 754 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570348|ref|ZP_03779373.1| ## NR: gi|225570348|ref|ZP_03779373.1| hypothetical protein CLOHYLEM_06445 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06445 [Clostridium hylemonae DSM 15053] # 1 754 31 784 784 1475 100.0 0 MKIQSKMRTLKRSICILMSGAFILTSFSTVVLAQDGPTPENSGGVTVDELPDGADAVSVP FGTKQDAIPFPELTADGGKTALENVTWNCGTYHSDQPGEYLFTAVLPEGYIPPESQQQGI TVTITVQTPITQSQIPTSPNVSDQGEPRAANQAPNTKTVSLNGSSTFEEAAAGAGISSPD SVNKLIITGKTDGGIWTQADGRYLRENFPHAAELDFSNYKGTFSKYAFSANTQLSKIRLP ADSKPSNYMFQDCSGLRTLVCGPETSVSFEDGVIDLTGAVLSDEEYTFSDSGIEKVRLPA NANVSYFMFNLCWNLKTLKCGSGRLTDDVIDLSGAASIKGGAFASSSIKNVRLPANAVIP DSIFRSCKNLKSLVCGPAESVSIQDGIIDLTGAASIGNSVFYLSGVVKVRLPADAVIPSM MFMSCDFLSTMVCGTGPFTDGVIDLSGAASIGSSAFESSNVKKVRLPADAVIPSMVFRFC NFLSTMVCGAGPFTDGVIDLSGAASIGSNAFEESNVKKVRLPVDIAIPSKMFANCSYLKT LAFVGNKITPTVDSGSFIGVPNDNSCTLYYPAGSGGYESGVFAAPYLNQWSRKEYSDIQI DVHPSVQNIFDKQDASYSVAAAGSPALSYQWQISTDSGRRWEDLPDTGVYSGAATDTLSL TNVPLAANGSQFRCIVYNDVQTLASNAASLTVKEKNVPQGQKNGSKNGQTKIENQGKGVK TGDETNLSLWIILAASGIGMLSGVWYRKRKCRKH >gi|224461045|gb|GG657759.1| GENE 2405 2525568 - 2526740 1250 390 aa, chain - ## HITS:1 COG:CAC1566 KEGG:ns NR:ns ## COG: CAC1566 COG2199 # Protein_GI_number: 15894844 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Clostridium acetobutylicum # 195 389 63 252 254 93 31.0 6e-19 METRKNLRKKIRRVDVQVSILIIVTTIFCSSVVFFIGYTLTYNDMIMNLEDRVTAIHDYL EDSLDKSTFRDINTKEDMNKLSYISMKKVLEDVKMSTNVRYLYTAKKDSSGNFVYVIDGL DYEAKDFRYPGDTIEQEIYKDMELALNGETVLPEEIKKTDWGNIFITYFPIHDKDEVVGV LGIEFEAAHQYDTYHMMKLFLPVIILVTCIIGTVIAVLVFRRVSNPAYKDMANTDQLTQL KNRNSFETDLNNLDARTKKDNFGIIIADLNNLKLVNDQFGHSSGDICILTAARAIQSVLP KNSAAYRLGGDEFVILSWDTDEEEIRSFKENVSQSLEEMSEEIEPNIPLSLSIGWELYDP AEDKNLKELFKRADEDMYRHKKEFHENDEL >gi|224461045|gb|GG657759.1| GENE 2406 2526778 - 2527218 449 146 aa, chain - ## HITS:1 COG:no KEGG:BHWA1_01097 NR:ns ## KEGG: BHWA1_01097 # Name: not_defined # Def: putative redox-active protein # Organism: B.hyodysenteriae # Pathway: not_defined # 1 146 1 145 148 161 53.0 9e-39 MTTDINMEQLQKDAVDIFHSGFACSESIIYAIKKNFELDMSDDAIAMSSGFPWGLGGGGC ICGALAGGTMCIGYFFGRTTPGDEKINKCFELTNELHDHFKETCGGTCCRVLTRGMERNS PERKAQCTKFVADTVKKTAEIIIREL >gi|224461045|gb|GG657759.1| GENE 2407 2527453 - 2528295 523 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 12 275 13 282 508 206 43 8e-93 MRTVDVSVITDNIKEMCIEANHYLSKDMDKAMKDAAGAEESPLGRQILEQLQENLKIAAG DMIPICQDTGMAVVFIEAGQDVHFVGGSLEDAVNEGVRKGYTEGFLRKSVVGDPVIRENT KENTPAVIHYRIVPGENVTVKVAPKGFGSENMSRVFMLKPADGLDGVKHAVLTAVKDAGP NACPPMVVGVGIGGTFEKCALLSKEALTREAGSHSEIPWVHELEEELLKRINGLGIGPGG LGGTTTALAVNVNTYPTHIAGLPVAVNICCHVNRHVIREI >gi|224461045|gb|GG657759.1| GENE 2408 2528328 - 2528879 407 183 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 10 182 321 494 508 161 48 8e-93 MMEKHIAAPITKEVARTLRAGDYIYLTGTIYTARDAAHKRMDETLSRKEALPVDLNGQVI YYMGPSPAREGRPIGSAGPTTASRMDKYTPRLLDMGLGAMIGKGKRSKEVLDAVVRNESV YMAAVGGAGALLSKCIKESEVVAYDDLGTEAIRKLTVEDFPVIVVADSAGNDLYETAIKE YEK >gi|224461045|gb|GG657759.1| GENE 2409 2528897 - 2529595 763 232 aa, chain + ## HITS:1 COG:CAC0965 KEGG:ns NR:ns ## COG: CAC0965 COG0204 # Protein_GI_number: 15894252 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Clostridium acetobutylicum # 48 201 57 210 241 95 35.0 7e-20 MVFRNIILVPFMWVKLCYYASHVDKYSEEKRFEMLKFITTRANKGGNVTIEVHGRENIPE KDGFMFFPNHQGLYDVLAVVQACPRPFSVVAKKEVAHIQFLKQVFACMKAYMIDRDNVRQ AMQVIIDVADEVKNGRNYLIFAEGTRSRNGNEVQPFKGGSFKAATKARCPIVPVALVNSF VPFDSSTIKPVTVQVHFLKPLYYDEYKDMKTTEIAGQVKDVIQQTIMQYDSK >gi|224461045|gb|GG657759.1| GENE 2410 2529587 - 2530645 782 352 aa, chain - ## HITS:1 COG:TM0282 KEGG:ns NR:ns ## COG: TM0282 COG2017 # Protein_GI_number: 15643051 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Thermotoga maritima # 21 351 25 354 356 207 39.0 3e-53 MGIFMNGYLESRDKKRKAPLFTLSNETMSVTICSYGGYITSLFVPDCGRTPGDVALGFDC LDDYEACTFAPCGIVGRYANRIRNGRFSLDGRDIQVTQNDGIHHLHGGKKGFHRYMWNPS VHMCGSGTEYLQLERLSPDGEEGFPGNLSVCVRFSLSRRNELSIRFLAVSDRDTVCNLSN HMAVNLNTCRGTTCLDHRLTIYGRTFSPASPDGIPTGEVLPVEHTNLDFREERLLGAQLL LPSRHTEPFGGLDHNWFLEDKSPMRRCLTLSHPGSGRVMECLTTMPCVHVYTSNSLTGSE TGKYGTPYNSQCAFFTETQYAPDSVSHPGWAQPFLKAGRQYDHTTVYRFSLL >gi|224461045|gb|GG657759.1| GENE 2411 2530842 - 2532014 1261 390 aa, chain + ## HITS:1 COG:BS_yjmH KEGG:ns NR:ns ## COG: BS_yjmH COG1609 # Protein_GI_number: 16078302 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 45 380 3 332 333 159 30.0 7e-39 MNRFILTALTTIYYQYYFNSPYRIIKLYWFKLKQQGWHMGKKNPTLRDVAKLAGVAVGTI SNYLNNPDGVKEKNRERIENAIKVLHFTPNTMAQRLASGRTNTILLYILSEQEIGDSTWL HQLPLIQAINDRLHKTRYNLQIKIGQIGEEEYSLGYMEDCIQGRIIDGAAILSAWEVPKE MLKLFLREDFPYVLLENKSDFTNHACIQFDNEQMTVSMVDYLAELGHEKIAFVDVKSDQQ HIRLRYRGYIKAITKYEFKLNKEYVRDGDFTIESGRRCAKELLMLPKPPTAVICGNDNMA VGMIEEIQGSGYRVPEDISVMGVDNSIVSKAVVPNLTTMEMPLKKMGEVAIEELLAKISD PEHQIESTMFQCRRIDRKSTGKVCDSVFRR >gi|224461045|gb|GG657759.1| GENE 2412 2532064 - 2533467 1529 467 aa, chain + ## HITS:1 COG:no KEGG:Halhy_4525 NR:ns ## KEGG: Halhy_4525 # Name: not_defined # Def: hypothetical protein # Organism: H.hydrossis # Pathway: not_defined # 19 467 18 463 463 280 34.0 1e-73 MSKVIKITSPEGILNEEQAAPVRLKDSVYRKRKELLTKRIQEKHLDFAVLYGDREHFANI EYFTRYDCRFEETLLIVRKDGKTWIVAGNEGMAYSYIIPYEAERLYYGNFSLQGQPRNNA ASLSQMMESVGIRKGSRIGLAGFKYYETAVEEEEAYTFDVPYYIVRSLQKAAGEDQVTDF TREITGLPDGLRMTVRDANEIAFIEYQSVTAANCVRRMLKNAKAGMTEMEISRKAGADLR ECMAYPNILAGERSVSLGLKSPDDFSVLEDGSPMTISYSTRGSMCARSGMAATGYDRLGE EQKKEFDAFYENYWHAIASWYAAVTVGVTGKEIFEIVHRYVGDKKYGVALNPGHCIGMDE WSNSPVSGQSEMKLYSGLHFQCDIVACMTEPVMAAICEDTIVIADEHLREALRSEYPEVY DRVVRRQEFMRKKLGIPVHEDVLPMSGNNGVMFPFLLDRSEIFALEK >gi|224461045|gb|GG657759.1| GENE 2413 2533500 - 2534981 189 493 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 245 482 1 245 563 77 28 3e-12 MSDKIAVCLEHISKTFPGVKALNDVNLELREGEVHALVGENGAGKSTLIKVLAGVYRPDE GGRIRLGWTEETVTDPYSAIKQGISIIYQDISLYPNLSIAENICMGRDKKRLISHSRQEK VAKEALKLLDIEIDTRKRLEDVSIGVQQLVAIARAVYFESRVIVMDEPTASLSSGEVEKL YRIIDMLRKKNISILYISHKFEEIFRVSDRISILRDGNYIGTFQTEEMSEDQLVVHMVGR KIDEMEKKKPVERREKLLELKGYSKNGSFEDVDFTLYRGEVVGLTGLVGAGRSELFQSVF GITRPDAGELYLDGERAVIGSPQSAIRKGLAYLPENRMTQGIIVKQSVRANLSAAVLEKI SGKLGLLDRKKEEALVAENMEKLDIRPRLPEMDIENLSGGNAQKVVVGKWLSTDPKIFIV DEPTAGVDIGAKAEIHRLLRDLARKGMGVIVISSELPEILKVSDRIVIMKKGKIVGEMES GEATQEKILEKAL >gi|224461045|gb|GG657759.1| GENE 2414 2535002 - 2535994 1173 330 aa, chain + ## HITS:1 COG:PM0154 KEGG:ns NR:ns ## COG: PM0154 COG1172 # Protein_GI_number: 15602019 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Pasteurella multocida # 9 304 16 314 322 169 37.0 9e-42 MKKIFAKRETTLLLAILIVAVITTVINPQFLTPFNIINIISTNAANAIMAVGMTAVLIVG GIDISVSAQLVTVGVLAGKLMQMQALNIVTMFLAFFVIGSLLGAVNGTLVARTNLPPIIV SLAMMNIFRGFILDWTRGSWLMGLPKYFLSLGTGKWLGLPISIYILAAAAAAMHFILRYT AIGRQIYAVGGNKTAAVRMGVSLSKVYIFVFASLGALTGIAAIVYFSPSGAILPTAANGL EMTIVASVVLGGTSINGGKGNVLSTLLGVLLLGLIQNALVLAHVQAYWQNILNGICIVIP VIIDAVNTKREQGEYRLPHIFDRMQPAKAD >gi|224461045|gb|GG657759.1| GENE 2415 2536006 - 2536977 1257 323 aa, chain + ## HITS:1 COG:BH3731 KEGG:ns NR:ns ## COG: BH3731 COG1172 # Protein_GI_number: 15616293 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus halodurans # 32 310 33 314 314 170 39.0 3e-42 MKKKTKTLEGNDRLLLIVFLGLTVFLAATTREFLTFGNLMRILQQMSELGIVSLGIMLVI LTGGFDMSSSAMIGMTSVTVGVLFKSGMNIWAAVLLGLAAALAAGLFNGWLVGELNIAPM LATLGTMTLYQGIGLALSKGDAISGFPEDFLMLGQGYLAGIPLQLFLLAALVILMTVVMN KGRFGRKVYLIGSGQTGSKFAGINVKKTIILCYGAAALMAGLSGVVVTSRLATARADAGA SYMFEGVAAVMLGGTDLAGGSGKVSGTIIGVLIFAILGNGLNLNKISSLKRQMLIGIVLL AVLLIRQFSGKLKERRMISGQNK >gi|224461045|gb|GG657759.1| GENE 2416 2537006 - 2538049 1365 347 aa, chain + ## HITS:1 COG:AGl271 KEGG:ns NR:ns ## COG: AGl271 COG1879 # Protein_GI_number: 15890249 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 44 343 22 318 325 120 30.0 5e-27 MKKGKQLTAVILAFVLVFGLAGCTRGGAEKKEDKTSSSESKKNGEDLKVVMMPKVMGMPI FESYYNSAKEQADELGITLDYIGPSELDASKQVNLVQDLISGGDTDALLICPADGEALVP VLKEAMDAGIHVYTWDDDVVDESAREYFINMCSDKIYGEQMGKTVGEMLKGKGKIGVVNG NMTATSLTLKEEALQDVLKNEYPDIKVMPTVYHGGDQQKAYALCQDLLTANPDLDLIAVI ATPGLLGAAQAVDASGRNEVIVYGAEQPNNIKEYMKKDGLEVVGCLWDVMTLGKEAVNIV YSCLADGKEYKEGDTVEGYPESSVEGTNITFNAVLEFDKDTVDDYNF >gi|224461045|gb|GG657759.1| GENE 2417 2538085 - 2538987 987 300 aa, chain + ## HITS:1 COG:AGc2623 KEGG:ns NR:ns ## COG: AGc2623 COG2159 # Protein_GI_number: 15888748 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 78 243 95 257 291 63 25.0 6e-10 MIIDAHMHLIRKENFDKERYQWLDNWRIPENMNLDELVKMWKGMGIEKIVAMGQAMYRIW NTDMAENYIQEAYEKYPDFIIPFASVEPIDKINRFNQASFDKFEEDVLNNRIRGVLFTPP CGHYNANDKTVYPFYQLAQKHGIVVQYHHSAMSECPPYFAPMKYYRPEHLNDVMMDFPKM KIVVEHMGYPHTEELFILMANSDRMYTDLSMAYDREMTIAWNLVQAREYGVLNKIMFATD FVAPDNYPFSADPSVEIRGHIDKVRSGFNEINRRCGWPLLTEEEIEGIMYHNAARLYDME >gi|224461045|gb|GG657759.1| GENE 2418 2539642 - 2540628 743 328 aa, chain - ## HITS:1 COG:STM2340 KEGG:ns NR:ns ## COG: STM2340 COG3958 # Protein_GI_number: 16765667 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Salmonella typhimurium LT2 # 14 310 14 309 317 269 44.0 5e-72 MWRLCSETEEKSKELKQVFTETLQDMMSADKAVIALEADLGGASGFLDIKKSHPDQFLDV GIAEANMIGVAAGLSMLGYIPYVHTFCPFASRRVEDQLFLSGAYAKNTINIYASDPGVCA ATNGGTHTSFEDLAFMRALPEALVFDPADDVQLEWLVRTLAPLKGIHYIRASRKAADRIY ERGSTFEIGKGNIIKEGSDVLLISMGEVLGDALRAANELEQDGISTEVVDMFTVKPLDSA LILQEAKGKQLIVTFENHSVINGLGSAVSDVLSEAGAGIPLRKIGVNDQFGQVGSVSYLK ETYGLTRQCVRRMIFEGVDGVRRREGRG >gi|224461045|gb|GG657759.1| GENE 2419 2540628 - 2541467 787 279 aa, chain - ## HITS:1 COG:STM2341 KEGG:ns NR:ns ## COG: STM2341 COG3959 # Protein_GI_number: 16765668 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Salmonella typhimurium LT2 # 5 270 6 271 276 286 52.0 2e-77 MEQNLKQYSARIRTVLLKLLKAKKGGHLGGSMSIVEVLSVLYGEQMKYDPRDPDWEERDL LVLSKGHAGPGLYAALCTAGYFPEEELYTLNEGGTRFPSHPDRTKTPGVDATTGSLGQGT SVAAGLGYGLKLKNSGRFVYLIAGDGELNEGQCWEAFQFIAHHKLHNVIVLIDDNKRQLD GYTADILNPFSLEDKMKAFGFHTETVNGADERQISDAVRRAKAVEDSAVCIILDTVKGQG AAYFEKMESNHSVKFNEQDCREVDKILEELADAYRLEEQ >gi|224461045|gb|GG657759.1| GENE 2420 2541481 - 2542152 957 223 aa, chain - ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 10 222 2 214 220 249 62.0 3e-66 MDTKTYTRREMASYIDHTLLKADAAKENILQICREAEQYHFASVCVNPAWISLVSEQLKE TGVKACCVISFPLGSETPEMKAMEAAYVIGQGAQEVDMVVNIGAVKSGDWELVNKDIRAV TAVKKDALVKVIIETCLLTDEEKVKVCEIAKEAGADFVKTSTGFSKGGATAHDVALMRKT VGSGVGVKASGGVRTLEDAEKMLAAGADRLGASAGKEIIRSLV >gi|224461045|gb|GG657759.1| GENE 2421 2542178 - 2543212 1117 344 aa, chain - ## HITS:1 COG:YJR159w KEGG:ns NR:ns ## COG: YJR159w COG1063 # Protein_GI_number: 6322619 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Saccharomyces cerevisiae # 8 329 9 340 357 186 35.0 4e-47 MSPMMKQVILDEPKSFACRNVEIPVPGEGQALLKMKAVGICGSDIHTYFGKHPFVHTPIV LGHEASGEIVSFGPGAHDGLTEGDRVVIRPQRTCGKCRPCREGRYNICEELNVLGCLSTG GSSEYFAVETSILYKIPDTLSYAEGTVLEPLAVGVHAVKRAGNPAGKNILVCGAGTIGNV AAQAALGLGAANVIITDISDYKLKLARKCGISNTVNVKDKSLRDAVRETLGEEQLDLILE CSAVESVLNDAIDIAPKGISIVIVGVFEDMPKVDMAAVQDREYALLGTLMYTHEDYMDAV RLAGEQKADLKSLITKTFTFDQYAEAYQYVENNRAAAQKVVIEI >gi|224461045|gb|GG657759.1| GENE 2422 2543458 - 2544576 1426 372 aa, chain + ## HITS:1 COG:YPO1293 KEGG:ns NR:ns ## COG: YPO1293 COG1879 # Protein_GI_number: 16121576 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 49 372 43 361 362 218 37.0 2e-56 MKKRLLSVLLCVAMTASMVIGCGAKEEKKDDSAKTESSDNKDGKIYLLHKGLDYYAWAAM QEAFDKYAGDLDCNYEILNAENDVSKQVEQFKTVLTQDPKAIIVTAIDSESLIDCVKEAN DAGIPVGVYDTPITGGDIDITVDCDNLMAGQQAAEIIVDKLKEKNGEEKGKVLNVFGDLA SQVMQERKQGFDNVMEKYPNIEVIEASGKGDRLLSQDAASNALAANEDIDAVHAPCDNAF YGVYEAVESAGKLKKVGEEGHIIMVSLDGEPAALDRISEGYMDGTVNLDWHAVAAICLEM MDKYIFEGKDLPDTYEAKDSYFKFAWDSTEIKDATEWKGPWISLPTHKIDKDNAQDPNNS GRYSADVLGIEY >gi|224461045|gb|GG657759.1| GENE 2423 2544680 - 2546191 1318 503 aa, chain + ## HITS:1 COG:YPO1294 KEGG:ns NR:ns ## COG: YPO1294 COG1129 # Protein_GI_number: 16121577 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Yersinia pestis # 2 488 36 518 524 340 37.0 4e-93 MLLEAKNICKSFHTKQVLNGIDFQVEEGEIHGLVGKNGAGKSTFVNIITGLISDYEGEVF FEGRNIDRESVLHRQKSGLFLVPQHSSIVTEFSVAENIFIGVWPKKKNGTVDRRKMESMA EEVLKVYGLRVSAQTKAGKLSLVEQRKLNIIRALFSEAKLIILDEPTTSLTKEERNNLFQ FIEELSKKGVSFIFISHYLDEVLKICSNITVFKDGYAGSLRLKEERTELELSKMIVGESV DLFSRKKNVKPPQGPCTLECRDLQAECVDHVSMKMYPGKVVGFVGFPESGAREMLRVLGG LNRLASGKLMDGSGGEIRVRDTRSAIRQGIMYVPFDRHEEGLVQDMSILHNISICVMKDK LSTMGYIKNRLELKNTMQYYNRLEIKAQNAKEPTRTLSGGNQQKVVLAKALCTEPKLLLL DEPTIGIDIGSREEILSLVDELAGEGISIVYHTSDYSEMLRICDEICFFHEGRFVRQIVN ENLTVEEITDIRDSLKGAETDEK >gi|224461045|gb|GG657759.1| GENE 2424 2546181 - 2547146 1170 321 aa, chain + ## HITS:1 COG:YPO1295 KEGG:ns NR:ns ## COG: YPO1295 COG1172 # Protein_GI_number: 16121578 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 10 317 23 330 332 195 41.0 1e-49 MKSKNYRGNMVELLSNNIVWFLLVISLIVMGIYQPAFFTVTIIKNILIQASALGIMTVGL AHVLLLGEIDLSIVGSMAFSAGLGTYLMKNNVLPWWLAIIFIIIFGCLIGLVNGLIITKL KAASLIETIAMNLILMGGLLALTAGRTFTNFPQEYNYVGKGSIAGIPLMSILLVLVFLCI GFLWNKTTFGRSLFAVGGNISCAKASGINVDWVKIMAFVISSGLCALAGWMYSAYMGAVP ASFGDNMQMYALASAVIGGVSLTGGVGKVNGVLGGVLLITLFQVGLNILGINPYLINTAG GSMIMVAVIIDALKNKYKANH >gi|224461045|gb|GG657759.1| GENE 2425 2547162 - 2548040 905 292 aa, chain + ## HITS:1 COG:AGl260 KEGG:ns NR:ns ## COG: AGl260 COG1082 # Protein_GI_number: 15890243 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 292 2 288 289 190 34.0 2e-48 MKYKYGVHYAAWGSEWDVDIKERIRLAAEAGFEDLEVTPPDYVPAMDIDKMNELKKCAED HGIEMSWCIGFPKEYDMASEDPSVRRRGIEYTKHMLEAIHMLDGKILSGILYSSWPYDFR NLPDKERTWELALSSVKECVKTAQDYGIIYAIEMVNRFEQFVLNSVEEGLTFIGQVGSPC CRLLLDMFHMGIEETSTPDAIRRAGKSLAHLHVCQNNRQIPAPCDNVPWDAVGQAVNDIG YEGRIVMEPFVIKGGPVGRDVNIWRNLMDDVSQEHISEELTKGLHYIQGIFG >gi|224461045|gb|GG657759.1| GENE 2426 2548058 - 2549539 1511 493 aa, chain + ## HITS:1 COG:CAC2612 KEGG:ns NR:ns ## COG: CAC2612 COG1070 # Protein_GI_number: 15895870 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 1 491 1 500 500 387 40.0 1e-107 MACILGIDLGTSSVKSMLLDETEGVVKTASRSYTVSIPKSGFAEQDPETWWEAVKQTIRE LKTDCPDQFCAIRAVGFSGQMHGLVLTGKKGEVLRPAILWLDQRSDRMAEQMHRELGMER MGEIFHNRAFSGFAFPSLLWVKEEEPEVFKKIHKILLPKDYIRLRMTGEWGTDASDASSA CILRTGERDWAYDIIGRYGIPEDIFPDVHESEETAGCITPACAQETGLPAGIRVVYGSGD QPAQSIGNGAVREGLIISNIGTGGQISTYSGTDTYDRRLRLHTFCHALNRAYTIFGATLC SGMSMNWLKDKILGAGSFQELSEAAQETEPGSGGLIYLPYLTGERTPHMDAGASGMFFGM KLAHDRRDLIRAVMEGVVFSLKDSLQIFGEMGLRAERIIASGGGAASPVWLQIQADILEK EICVCSVKEQACLGACIVAGAGTGMLESVSEGVSRYVSFREDTYEPREKLQEMYREMHRK YQKLYEHTRDLMR >gi|224461045|gb|GG657759.1| GENE 2427 2549556 - 2550635 1024 359 aa, chain + ## HITS:1 COG:mlr7229 KEGG:ns NR:ns ## COG: mlr7229 COG0673 # Protein_GI_number: 13476023 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Mesorhizobium loti # 1 359 1 358 358 384 50.0 1e-106 MHRKEERCLRLGVLGCGMICQAAHFEAALKAGNVELYAICDVAEDLLGQMADMYHCRKRY TSYEEMLKDHEIEAVLIGIGDQFHAECTKQALRAGKHVLVEKPMGVTVEECREIEELVKE TGLVLQVGYMKRFDEGIQFSRKFIREEMGDVLSIKAWYCDGTSRYTLTDNVQPYIFTSGQ SRKPSGCPKENREHYYLLGHSGHLFDTVRYLMGDIVSVEAKLIQKGDMYSWLICADLENG TAGMLDLTVAVRRDWYEGFEVFGTEGTVIGKTFNPWLFQSTEAEAYSLRRNEYFRPMAAD GHFYRRQLEGFADVILTGAPQNGADASDGTAAMRAMKAVYDSVHEGGRKIFLKDVRGGL >gi|224461045|gb|GG657759.1| GENE 2428 2550635 - 2551462 750 275 aa, chain + ## HITS:1 COG:SMc03811 KEGG:ns NR:ns ## COG: SMc03811 COG1082 # Protein_GI_number: 15966947 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Sinorhizobium meliloti # 1 275 1 274 276 181 37.0 1e-45 MKIGIFAKTWAGRGDLAAVFRAAGAYGIESFQFNMCLAGGKTLPDRYDSRLVSEIGSLAE QYKIELAAMSGTFNLLDKNRLGEYTEKTEILMETCADLSIPVLSICTGTNSTESMWTRHP DNDSEESWGLMKEHLGRLLVLAEKYPLTIGVEPETSNVVSSARKARRLMDECRHSRLKII LDAANLFRPGEKQFMRERIGEAVTLLKEDIVLVHAKDCKLNGHLVYKAAGKGDIDYTYYI ACLREAGYDGSMILHGLSEEEVADSIRFLKSQLQA >gi|224461045|gb|GG657759.1| GENE 2429 2551474 - 2552277 571 267 aa, chain + ## HITS:1 COG:lin2214 KEGG:ns NR:ns ## COG: lin2214 COG0596 # Protein_GI_number: 16801279 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Listeria innocua # 1 264 1 259 265 159 33.0 4e-39 MGYFEHGGIRFYYRTAGKGVPFILLHGMGGDTKQCGRVFHPPQGIQMIYMDQRGNGYTEI GPAEELRFEAMAGDVEALADHLKLDRFLLGGISMGAAVAVRYAIEHRDRVTGLVLIRPAW THVPMEVEVRELYHRVAYLIETSGSPEEAADALLKWEKYRILRAEEPAAARSLLKHFSED SIEKNYEKFRILPEQSPFHNPGQLKQITCETLVLASKKDFIHKFQYGLYYRDYIENAQLA EIVPKSKSVRMYNRSVQEEIDRFLQKI >gi|224461045|gb|GG657759.1| GENE 2430 2552332 - 2553105 833 257 aa, chain - ## HITS:1 COG:TM1069 KEGG:ns NR:ns ## COG: TM1069 COG1349 # Protein_GI_number: 15643827 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Thermotoga maritima # 2 254 1 250 252 112 29.0 9e-25 MLASERERMILEYLNTNEIATTKFLCELTGASIATIRRDLNQLDKRGLLKKTHGGAQCIS SRSYHGYPGPSLDYDPFLKSKEQIARKASEFISAGDIIFIGAGMTCNLLSKYINDKENIT VVTTNLTAVMELVPNPNISILLLGGNVHIGTNHIETLDEYTVQALDKLYFDKVFFTVDGI ELNNGYSIISRAQLPLYNHLISNSKLIYLLADEGKFDKRTFTHLCDLDEIPNIITNASTD QKYISYYKEHEIGVFTV >gi|224461045|gb|GG657759.1| GENE 2431 2553450 - 2554067 600 205 aa, chain + ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 6 153 4 149 199 104 41.0 1e-22 MSKTYGYVRVSTREQNEERQMIALHNFPVLPENIYMDKQSGKDFNRPKYQKLLKKLKKKD ILVVKSIDRLGRNYKEILDQWRYLTKTKEVYIVVLDMPLLDTRKSNDLIGTLIADIVLQL LSYVAETERENIKQRQAEGIAAAKARGVKFGRPNKKVPVNFYKVYKRWHYKKISGREAAR QLGVSYSTFMKWAGCADRTSDRIKK >gi|224461045|gb|GG657759.1| GENE 2432 2554375 - 2554638 269 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570378|ref|ZP_03779403.1| ## NR: gi|225570378|ref|ZP_03779403.1| hypothetical protein CLOHYLEM_06475 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06475 [Clostridium hylemonae DSM 15053] # 1 87 1 87 87 146 100.0 6e-34 MEKKSFLEYLAQEAGCDCLSDLRLRQEQWSSRIIEILENVDTEEYVFSDWKEATSYLTDT DLSILDGIKTKKEAKEYIIDWMNSKKH >gi|224461045|gb|GG657759.1| GENE 2433 2556250 - 2556720 606 156 aa, chain + ## HITS:1 COG:L52019 KEGG:ns NR:ns ## COG: L52019 COG1070 # Protein_GI_number: 15674166 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Lactococcus lactis # 4 154 350 499 519 92 32.0 4e-19 MGSADSRGCYIGMSMDKEIGHFIRALLEGVALEFKRTLDVFEDSGNSIHAVYHSGGGAKG DLWNQIKADIYEKPIYTLQADEGGVLGVSLMAAYAVGIIGDLIEGADAVVKVKKVYEPER NNFAVYREMKEVFSELHDTLQTPFRHMARVQEKFGK >gi|224461045|gb|GG657759.1| GENE 2434 2556763 - 2557368 687 201 aa, chain + ## HITS:1 COG:PAB1199 KEGG:ns NR:ns ## COG: PAB1199 COG2140 # Protein_GI_number: 14521944 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Pyrococcus abyssi # 13 200 2 187 189 157 44.0 1e-38 MADFNVDKQTFDYIRGFTIDLDMKTGMSGMKKTSRRYLSQMKGMFSDDAAYEKKLEEEGD VLVYEFHEMGVPEHPGDLAFGCSITYPGKVGEEYYMTKGHFHTILDTAEVYYCLGGHGYM LMESPEGDWLAHELTPGKALYVPKRYAHRSVNVDPEQPLLTFFVFRADAGHDYGTIETKG YRKLLVEKDGKPAVTDNPKWS >gi|224461045|gb|GG657759.1| GENE 2435 2557948 - 2558895 895 315 aa, chain - ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 38 306 30 302 524 226 43.0 5e-59 MKILVTPTSLKPEKNAPALARLSSFCKDLVFNPAGRPLSEQELLPLLKDCDGYLAGLDQI SGPVMECCPRLKAISRYGAGYDRVDLPAAKKLGIKVANTPGANAQAVAELSFALLLALAR NIPYLHNETAAGSWIRATGMELYGKTLGIVGLGAIGRKVASCSAGFKMNVLAYDPYIQED YCQAHGIIPSSLDTLLSEADFITLHLPLNNDTYHLINEQSLTLVKPGAILVNASRGGIID EEAAFQALKAGRLGGLGLDAFEQEPPGQTPLFTLPNVIATPHTGAHTAEATRAMADMAVD NLIAMLEDRPCSFVL >gi|224461045|gb|GG657759.1| GENE 2436 2558901 - 2559533 507 210 aa, chain - ## HITS:1 COG:HI0047 KEGG:ns NR:ns ## COG: HI0047 COG0800 # Protein_GI_number: 16272022 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Haemophilus influenzae # 3 207 8 212 212 190 44.0 1e-48 MNIMEQIRHHRLVPVIKLDEASDAAPLAEALCEGGLPVAEITFRTEAAKDAIRLMTRQNP QMLVGAGSLTNAGQAEQAVDAGASFLVSAGFSRQVTEFALDNNIPVFPGICTPTELMLLV EYGLPVAKFFPAEQYGGLKTIKALSAPFPNMSFMPTGGIGPENITDYLAFSKIIACGGSW MVKDSMIRGHEFDKIRALTKEAVGLVQKEA >gi|224461045|gb|GG657759.1| GENE 2437 2559554 - 2560519 682 321 aa, chain - ## HITS:1 COG:MYPU_5930 KEGG:ns NR:ns ## COG: MYPU_5930 COG1735 # Protein_GI_number: 15829064 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Mycoplasma pulmonis # 3 319 4 328 351 136 29.0 5e-32 MTYIQTVTGRMPPESLCFCHCHEHLMITKGRSYLINKALCIDNYEKTLTELVQFRTGGGT TIVDAQPGGCGRDADALYRLGQESGVQIIASAGFHKMIFYPRGHWIFDIRREALAELFLR ELTEGMYTDCDETWPRRTCGAKAGIIKCAYDACGLVLQYGKLFDAAVDAAIRTGAPLMVH IERGAAPLKLMSYLDRRQMPLNRVIFCHMDRAEDDLAVHKEVCRHGIYLEYDTIGRFKYH SDEREAEIFAEMFAAGYEDHILFSLDTTRERLKSYTPEGIGLTYILDTFVPLLKSKGITE AQLKKISCTNCRKILTFDKAN >gi|224461045|gb|GG657759.1| GENE 2438 2560543 - 2561475 788 310 aa, chain - ## HITS:1 COG:SMc02044 KEGG:ns NR:ns ## COG: SMc02044 COG0169 # Protein_GI_number: 15966309 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Sinorhizobium meliloti # 1 308 1 311 317 346 54.0 3e-95 MNNYTKADTPTFYFIGVTTSKSSIMNVFPKWAGELKLDAIIKGFDFIPHSPAKDYREAVD FIKHDPNSLGALVTTHKIDLYNACKDQFDYLDPYAQKLGEISSISKKDGKLCGHAKDPIS SGLALEHFVPENYWADHDGDVLLMGAGGSSLAMSLYFSQSRPGGNVPKHIIIANRSVPRL ETAKQILSDLNPDIHFDFVHNPTPADNDRTLAALKPHSLIVNATGLGKDGPGSPLTNACC FPPDSLVWEINYRGDLLFKEQAERQAAQKRLHVEDGWIYFIHGWTQVISEVFHIPIDTEL IDRLSMIARQ >gi|224461045|gb|GG657759.1| GENE 2439 2561690 - 2563015 1546 441 aa, chain + ## HITS:1 COG:SP1939 KEGG:ns NR:ns ## COG: SP1939 COG0534 # Protein_GI_number: 15901763 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 14 441 18 442 456 261 35.0 2e-69 MERDMTVGKPARIILNFTIPIFIGNIFQQLYSMVDTVIVGKFVGNEALAAVGACGTLMFL ILGFLLGLTAGFTVITAQHYGAGNMRAVRQSVASAAVLAAVVSVLLTVVSMVMMRHVLNW MNTPSDMYGEAYGYIMVICGGITAQVLYNLLAGILRAVGDSKRPLYFLILAVILNIVLDL VFIIVFRMGAAGAAYATVISQGVSGLLCLAYIVKRMPELHPHREDWKVNKSLAKWQLKIG IPMALQFSITAVGTIIVQSALNMLGSVAVAGFAAANKIEQIVTQAYVAIGTTMATYCAQN TGARKIERVRAGFRSATWIGIAYAVVTGIIVIAAGKYMTVLFVSDNVGQITEYVDIYLKC VGISFVPLVFVNVYRNGLQGMGFGVLPMLAGVAELVGRSAAAVTASRFGSYAGICLASPA AWLLAGLLLIAMYFFIMKRKI >gi|224461045|gb|GG657759.1| GENE 2440 2563095 - 2563790 947 231 aa, chain + ## HITS:1 COG:CAC1789 KEGG:ns NR:ns ## COG: CAC1789 COG0528 # Protein_GI_number: 15895065 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Clostridium acetobutylicum # 2 230 7 235 236 198 44.0 7e-51 MKRVLLKLSGEALAGDKKTGFDEATCMGVARQVKQLVDDGIQVAVVTGGGNFWRGRTSET IDRVKADQIGMLATVMNCIYVSDIFRYAGMKTEVFTPFVCGAFTALFSKDAALAALEEGK VIFFAGGTGHPYFSTDTGAVLRAIEIEADAMLLAKAIDGIYDSDPKVNPSAKKYDEISIQ EIIDKKLMAVDLTASIMCLENKMPMLVFGLNEENSIVETMTGTFSGTKVTV >gi|224461045|gb|GG657759.1| GENE 2441 2563809 - 2564360 849 183 aa, chain + ## HITS:1 COG:CAC1790 KEGG:ns NR:ns ## COG: CAC1790 COG0233 # Protein_GI_number: 15895066 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Clostridium acetobutylicum # 5 183 6 185 185 175 56.0 3e-44 MDEKLKVYDDKMNKTIASLEGELAAIRAGRANPNVLNKIMVNYYGTPTPIQQVANVSVPE ARMIHIQPWEKSMVKEIEKAIMTSDLGINPTNDGSAIRLAFPELTEERRKELAKDVKKKG ENAKVAIRNIRRDGNDTLKKLKGSEVSEDEIKDLEDELQKLTDKFIKEVDKAVEAKSKEV MTV >gi|224461045|gb|GG657759.1| GENE 2442 2564433 - 2565149 785 238 aa, chain + ## HITS:1 COG:SMc02097 KEGG:ns NR:ns ## COG: SMc02097 COG0020 # Protein_GI_number: 15965252 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Sinorhizobium meliloti # 2 234 8 240 247 252 50.0 5e-67 MNVPQHVAIILDGNGRWAKSKGMPRNYGHAQGSKNVERICEEAYRMGIKYLTVYAFSTEN WNRPQDEVDALMKLLRNYMKTCLKTAAKNDMKIRVIGDLSRLDDDIRGRIAELVEATKNN KGLNFQIAINYGSRDEMVRAVRRLAEDCASGRIKADDIDETLFEHYLDTHDIPDPDLLIR TSGEQRLSNYLLWQMAYTEFYFTEILWPDFTKEELVKAVAQYNARDRRYGGVKEEQDV >gi|224461045|gb|GG657759.1| GENE 2443 2565142 - 2565939 730 265 aa, chain + ## HITS:1 COG:CAC1792 KEGG:ns NR:ns ## COG: CAC1792 COG0575 # Protein_GI_number: 15895068 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Clostridium acetobutylicum # 5 240 6 240 245 130 39.0 3e-30 MFKTRLVSGIILVIVLIALVGHGGYVLLGFLAAVSLIGMYELYKVVNVQNKILGFAGYLV SAAYYGLILSGNLKLNTMLSILFLVLLMAVYVFSFPSYRAEQVMTVFFGFFYVAVMLSYI YQTRMLEDGGVLVCLIFLSSWGCDTCAYCVGMLFGKHKMAPKLSPKKSVEGGIGGIAGAA LLGALLALGVNAWAGMSVSPLYYAVICGVGGAISQVGDLAASAVKRNHDIKDYGKLIPGH GGILDRFDSVIFTAPIIYYLATYLA >gi|224461045|gb|GG657759.1| GENE 2444 2565977 - 2567119 1385 380 aa, chain + ## HITS:1 COG:CAC1795 KEGG:ns NR:ns ## COG: CAC1795 COG0743 # Protein_GI_number: 15895071 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Clostridium acetobutylicum # 1 367 1 370 385 384 53.0 1e-106 MKKIAILGSTGSIGTQTLEVVRENKDIEVLGLAAGSNVELLEKQAREFHPRLIAVWTEEK AKELRARVRDTDMKVVSGMEGLIEVSTMSDVEILVTAIVGMIGIRPTVEAVRAGKNIALA NKETLVTAGHIIMPLAEENHVSVLPVDSEHSAIFQSLRGNEAKAVNRILLTASGGPFRGK REEDLLNVRVEDALRHPNWSMGQKITIDSSTMVNKGLEVIEAKWLFGVDVDQVQVVVQPQ SIIHSMVEYVDGAVMAQLGTPDMKLPIQYALYYPKRRYLPGERLDFWSLGRLDFEKPDMD TFYGLKLAYDAGRAGGTLPTVFNAANELAVKQFLNREIKYLEIIEIIEDCMKAHKNIKEP TLEQIFDTERATYERIESRR >gi|224461045|gb|GG657759.1| GENE 2445 2567130 - 2568161 1110 343 aa, chain + ## HITS:1 COG:CAC1796 KEGG:ns NR:ns ## COG: CAC1796 COG0750 # Protein_GI_number: 15895072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Clostridium acetobutylicum # 3 338 6 333 339 229 39.0 7e-60 MGIIFAIIIFSFIVFFHELGHFSLAKKNGIDVEEFSIGMGPTLFSKEYRGTRYCIKLLPL GGSCMMGEDEEATDSPGNFNNKPVWARISVIAAGPVFNFILAFVFAVILIVMVGYDKPVV QSVDSGFPAQEAGIEPGDTIVKMGGKKINIFREINFYNQFHQGEKVEVTYLHDGKKETAT LTPKLDKESDYYRIGIGGGSNTKANIGTALQYGAYEVKFWICTTMESLKMLVTGQIGVDQ LSGPVGIVDAVDSTYQQSKSYGFLIVLAQLMNISILLSANLGVMNLLPLPALDGGRLVFL FIEMIRGKRVPPEKEGYVHLVGIMLLMALMVFVMYNDIRRVFF >gi|224461045|gb|GG657759.1| GENE 2446 2568199 - 2568891 714 230 aa, chain + ## HITS:1 COG:BS_yclJ KEGG:ns NR:ns ## COG: BS_yclJ COG0745 # Protein_GI_number: 16077443 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 7 229 3 227 227 128 33.0 8e-30 MDKKGIVLLVEDNEAILRTNRRILEAEGFTVLCAGTLCEAGQRLSEETPDVLVLDIMLPD GSGIEFCREIQELTAAPVLFLTALDEDHEIVEGLTAGGSDYITKPYNMDQFVARVKAQLQ LARRNQRAIEQVKTLKRGPLTLEVLAGRAYLNGADLLLSAKEFALLRYLVQNEEYTIPKE VLYEAVWNLPAVDDARVVKSHLSRVRARLQGSGYTIRAVRGKGYQFGPDK >gi|224461045|gb|GG657759.1| GENE 2447 2569602 - 2569691 72 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEKFELRGVSGWGRAAGDCGALEGALSSR >gi|224461045|gb|GG657759.1| GENE 2448 2569728 - 2569901 115 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570398|ref|ZP_03779423.1| ## NR: gi|225570398|ref|ZP_03779423.1| hypothetical protein CLOHYLEM_06498 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06498 [Clostridium hylemonae DSM 15053] # 1 57 1 57 57 82 100.0 8e-15 MFEGIAAYGWGRAAGNCGTVGALAIRKGRRRGRDRHRQNSTGNLDDFLCQLSQKLHL >gi|224461045|gb|GG657759.1| GENE 2449 2569920 - 2571185 1064 421 aa, chain - ## HITS:1 COG:CAC3244 KEGG:ns NR:ns ## COG: CAC3244 COG3409 # Protein_GI_number: 15896489 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Clostridium acetobutylicum # 14 421 3 408 437 357 47.0 3e-98 MNEMNPNLPDTPDKGRLKISITSEVTAYPVNDATISISYTGVPDSQLEQLNTDASGQTDT VELAAPPLEYSLNPAIEEQPYAEYTLQVDAPGFEPISIAGAEILPDVTALQNIQLRPLTD PENAENVFVIPAHTLYGVYPPKIPEEEIKPVDESGEIVLSRVVVPEYIVVHDGSPRDTTA QNYYVKYKDYIKNVASSEIYATWPEDTIRANVLAIMSFTLNRVYTEWYRNQGYDFTITSS TAFDHKWIPERNFFDTISAIVDELFSNYLSRPNVRQPILTQYCDGRRVQCPNWMTQWGSK SLGDQGYSPIEILRYYYGDDMYINTAEAVSGIPSSWPGYNLEIGASGDKVLQMQEQLNVI AGAYPAIPKITADGVYGPATEAAVRKFQSVFGLPETGIVDYRTWYKISEIYVGVSRIAEL Q >gi|224461045|gb|GG657759.1| GENE 2450 2571314 - 2572534 1253 406 aa, chain + ## HITS:1 COG:SPy0210 KEGG:ns NR:ns ## COG: SPy0210 COG5279 # Protein_GI_number: 15674407 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain # Organism: Streptococcus pyogenes M1 GAS # 66 369 51 376 410 120 24.0 4e-27 MGRRKRKSGCISAVIGLAVMFCIVVLAAMGGFLGKGVKKGLAEGVAKGMNSARQIPFQEI SITDAELAQKYYYRQLDEAEQTAYKEIAQGVKMNVEEIYVHAADADRTNTIFQYVLKDFP EIFWCDGTTKSTSYEGQETYTVLQPVYSYAEEEKTRKKAEIESAVNDCLSGIGEGASDYD KILYVYEYIVDTVDYDIASEDNQNIYSVFVNKKSVCAGYSKATQYLLERLGVFCTYVTGT TSGGQSHAWNLVKCRGDYYYVDTTWGDPVFQASEGGEIDPSYISYDYMCCDDEELRKTHT PDTEVPMPECVKMDFNYYNVNGMYYTEYDGEKALRAMNDVILEKGNPVVFKFADRRLYEQ GREDIFGTQIKRAAQNLADWYGLTEVKYQYMDEAELNKITIYWQYK >gi|224461045|gb|GG657759.1| GENE 2451 2572601 - 2573107 449 168 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2664 NR:ns ## KEGG: Cphy_2664 # Name: not_defined # Def: CarD family transcriptional regulator # Organism: C.phytofermentans # Pathway: not_defined # 1 157 1 164 168 75 28.0 1e-12 MYKVNDVVVYGCSKVCFIKKIGTPDFMSKPQNYYWLQPVGDTTTMLYVKTEHEDKMRSIL TKGQADELMRELPEMEEMYDSSNKVRDREYIQVMKSRDCGEWLKMWKGITVEKMRKEQDG KSLNASDESNLKRVQDCISSEFSAVFQTTKDKIVSRMRHSLGAELISL >gi|224461045|gb|GG657759.1| GENE 2452 2573453 - 2574523 1113 356 aa, chain + ## HITS:1 COG:lin1950 KEGG:ns NR:ns ## COG: lin1950 COG0505 # Protein_GI_number: 16801016 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Listeria innocua # 2 352 3 353 363 344 47.0 2e-94 MKAFLILEDGTVFSGTSIGSKRDMISEIVFNTSMTGYLEVLTDPSYAGQAVVMTYPLIGN YGITPDMESKKAWPDGYIVRELSRMPSNFRSAGSIQDFLEKQDIPGIAGVDTRALTKILR EKGTMNAMITTNESYDLDEIIPKLKAYTIGDVVSEVTCGETYILEGSGPKVALMDFGAKN NIARSLNRRGCEVTVYPADTPAETIIQSNPDGIMLSNGPGDPAACVSVIKEIKKLYNTNI PIFAICLGHQLMALANGGKTYKLKYGHRGGNHPVKDLSNNRVYISSQNHGYAVDGSSMDP AVAEEAFVNVNDGTNEGLSYTGKNIFTVQFHPEACPGPQDSGYLFDRFMDMMKGAK >gi|224461045|gb|GG657759.1| GENE 2453 2574523 - 2577720 3846 1065 aa, chain + ## HITS:1 COG:BH2536 KEGG:ns NR:ns ## COG: BH2536 COG0458 # Protein_GI_number: 15615099 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus halodurans # 1 1051 1 1050 1062 1194 56.0 0 MPRNKEIKKVLVIGSGPIVIGQAAEFDYAGTQACRSLKEEGLEVVLLNSNPATIMTDKDI ADRVYIEPLTVEVVEQLILKEKPDSVLPTLGGQAALNLAMELDENGFLRRNNVRLIGTTT ETIKKAEDRLEFKTTMEKIGEPCAASLVVEHVDDGVRFAEKIGYPVVLRPAYTLGGSGGG IAGDREQLVEILENGLRLSRVGQVLVERCIAGWKEIEYEVMRDGNGNCITVCNMENIDPV GVHTGDSIVVAPSQTLGDKEYQMLRTSALNIISELNITGGCNVQYALHPDTFEYCVIEVN PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIKNAVTKKTYASFEPMLDYCVVKLPRL PFDKFISAKRTLTTQMKATGEVMSICDNFEGALMKAIRSLEQHVDSLMSYDFSGLTKEEL LEQLETVDDMRIWRIAEAVRKGLTYDEIHGATKIDRWFIDKIAILVEMEQKLQNTTLSAE VLREAKRLEFPDNVIAGLTGNTERQIHDMRHEYGITASYKMVDTCAAEFAAETPYYYSVF GSENEVEETGGRKKVLVLGSGPIRIGQGIEFDFCSVHCTWAFAKEGYETIIVNNNPETVS TDFDIADKLYFEPLTPEDVESIVDLEKPDGAVVQFGGQTAIKLTEALMKMGVPILGTSAE NVDAAEDRERFDEILEACRIPRPTGGTVYTAEEAKEVANRLGYPVLVRPSYVLGGQGMQI AINDHDIDEFIGIINRIAQDHPILVDKYLQGKEIEVDAVCDGEDILIPGIMEHIERAGIH SGDSISVYPAQSISEKTKKTIEDYTRKLAQSLHVIGLINIQFIVCGEDVYVIEVNPRSSR TVPYISKVTGIPIVPLATKVIIGGKLKDLGYTPGLQPEADYYAVKMPVFSFEKIRGADIS LGPEMKSTGECLGIAKTFDEALYKAFLGAGIKLPKYKNMIITVRDEDKPEAVEIGRRFEK IGYRIFATRSTAEAMNKAGVKANPVNKIEQESPNLMDLILGHKIDLVIDTPPQGADRSKD GFIIRRNAVETGVNVLTAIDTAEALITSLENTDIRKLTLIDIAKI >gi|224461045|gb|GG657759.1| GENE 2454 2577936 - 2578610 869 224 aa, chain + ## HITS:1 COG:SP1633 KEGG:ns NR:ns ## COG: SP1633 COG0745 # Protein_GI_number: 15901469 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 220 1 220 225 253 57.0 1e-67 MYKILVVEDDMTIAGALERHLSKWDYEVRSVEDFKNVMNEFVEYDPQLVLLDIALPFFNG FHWCNEIRKVSKVPIIFISSANDNMNIVMAMNMGGDEFIEKPFDLNVVTAKVQALLRRTY SFQGALNVIEHKGVLLNLNDAAVIYREKKLELTKNEFKILQSLMEHAGQIVSRDDIIERL WESDEFIDDNTLTVNVARLRKRLETIGLGDMITTKKGIGYMVEV >gi|224461045|gb|GG657759.1| GENE 2455 2578607 - 2579626 1174 339 aa, chain + ## HITS:1 COG:SP1632 KEGG:ns NR:ns ## COG: SP1632 COG0642 # Protein_GI_number: 15901468 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 106 339 101 324 324 184 41.0 2e-46 MRLLCDYLKEHIRSVCLYIGFIGIFAVVFYLSNVRLDAVLYAFFLSVIWFVLYGGIGFVR YADRHRKLLEAGKQIKTVWAELPEAFGLIEQDYQSMIKELFDSKVEMESEEEIARQEMID YYSLWAHQIKTPIAAMRVLLQSWEEEQTPGDQTHLKELKLELFKIEQYVEMVLSYLRLGD MASDMVLQWYSLDDIVRQAVRKYSQMFILQKMKLDFTPSEDMVLTDEKWLVFVVEQLLSN ALKYTRAGSISVYADKSRGAEVLVIEDTGIGIQEEDLPRVFEKGFTGYNGRKDKKSTGIG LYLCKTVMDRLGHGLWIESEVGAGTRVFLSLERDEIVPE >gi|224461045|gb|GG657759.1| GENE 2456 2579752 - 2580519 300 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 225 1 220 245 120 32 4e-25 MSLLDVKNVRKIYTTRFGGNQVEALKNVSFSVEPREYVAIMGESGSGKTTLLNILASLDK PTGGKVYLKGNDLSKVKEKELAAFRRQNLGFVFQDFNLLDTFSLKDNIFLPLVLSGRKYE EMEKRLAPIAESLGIKSLLNKFPYEVSGGQKQRAAVARAIITKPQLILADEPTGALDSRA ADELMNLFGVINNEGQTILMVTHSVKAASNAKRVLFIKDGEVFHQLYRGNLTNEQMYQKI ADTLTVLTTGGERGE >gi|224461045|gb|GG657759.1| GENE 2457 2580512 - 2582497 2295 661 aa, chain + ## HITS:1 COG:SP0913 KEGG:ns NR:ns ## COG: SP0913 COG0577 # Protein_GI_number: 15900794 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 7 660 6 660 662 349 33.0 1e-95 MNKSIYSKLALTNIKNNRKTYIPYILTAVLTVMMYYIMDALARNKSVGDGSLRLCLNYAL GVIIVFAVIFLFYTNSFLIKRRKKEIGVYNILGMGKRHIAKMLTVESLITAGASIAVGLA TGVIFSKLMYLVLLKILHYKINMSFEISPVSVARTILLFAAIFALTLLYNLMQIHLANPV ELLRGGNQGEKEPKTKILLTIFGVVTIGIGYYIAIATESPLEALMFFFVAVICVILGTYA LFTAGSIALLKALRKNKSFYYKTKHFTSVSGMIYRMKQNAVGLANICILSTMVLVMVSTT VSLYAGMDDILNTRFPERFRVTNYAATEEGMERTGQIISQETEKAGVTVKNKVAYRSGEM SAILDGDKVHLEDTGSYGMSDMVELSVIPLEDYNTFEKKDVSLGDDEALIYMTGRTYGKD TIQVGSRRYKVARELKDMVLERKNKSNVVERMYMVVPDLQQTVKITDEAYGNSTMDDAWT ERMGNVRYIVRLDLSGSDEKCLSAMKAMQKQIESEVSPSVCESRDISVESFYMLYGGLLF IGIYLGLMFLMATVLIIYYKQISEGYDDKERYQIMQKVGMDKKEVKRSIRSQVLTVFFLP LIVAIIHIAVAFKVMTKMLATLNLVNVPLFLTCTIITVVVFAIFYAIVFAITAREYYKIV N >gi|224461045|gb|GG657759.1| GENE 2458 2582645 - 2582989 437 114 aa, chain + ## HITS:1 COG:TM1287 KEGG:ns NR:ns ## COG: TM1287 COG0662 # Protein_GI_number: 15644042 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Thermotoga maritima # 12 114 19 121 121 91 42.0 3e-19 MTKAGEREVVTVERANGGAGFIMKEALISAEQLGEHCKMFSRVTLKPNCELGYHEHHGET ETYYILSGSGMYDDNGKAVPVEAGDVTFCRDGDGHGLKNTGTEDLSFVALILKL >gi|224461045|gb|GG657759.1| GENE 2459 2583060 - 2584157 1100 365 aa, chain - ## HITS:1 COG:STM0644 KEGG:ns NR:ns ## COG: STM0644 COG0079 # Protein_GI_number: 16764021 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Salmonella typhimurium LT2 # 8 364 8 358 364 229 34.0 4e-60 MDKKPEFHGSDIEQISEYYHIPQEDIVSFGANVNPLGLSEYVKEQLASHLDVITRYPDRN YTALRQTIGTYCHADPAHIVVGNGSTELISLLIGRQRPKKALVIGPTYSEYARELSLAGG TLEYYNLREDRDFILDIPDLLSALTPETGLLILCNPNNPTSSALTCGELEEIIRPCRERG IFVMIDETYAEFAPEPASVTAIGLIPKYDNFMVIRGVSKFFAAPGLRFGYGITSNEDFLS SLRRHQNPWSLSSVGAFAGELMLQDDAYIKKTWSLIDSERSRLYRELCTWKSVKAYRPSA NFILIRLLREGLTSFDVFEYAIRRGLMIRDCSSFESLDGEYIRFCIMKPEDNDRLMACLR ERLSS >gi|224461045|gb|GG657759.1| GENE 2460 2584259 - 2587579 3655 1106 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1826 NR:ns ## KEGG: EUBREC_1826 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 10 1077 1 1148 1181 396 26.0 1e-108 MQRKKQVAGLKNKIQKFSKGDFHNAHPDVIFQETNLVMIIGEGEVYRGSFSVKSQTEGNI RGLIYPSSFRVHFKDQGFEGNPARVEFTYDGRGLRPGHVEEGKFTVVCNGGEYELSFTAI IEKPYVMTSYGKVQSTDDFRKLAIKDYSEAGRLFRSREFYEILKYENERIFYLYDNMRKW SLGEQAMEEFLVGIKQKECIFLTLPGEGMLFEDIEESTKGTLTLMKNTWGFMPIKVEAEG RFIKVLRPELSTEDFVGNTYEVEYLVRPEELHGGRNFGALKFITPYETLIYEIEVLQNQD YDEDHRMKELLEAQILKGYVGYVAGRVELNNWVESAIEKMAALRKMDPQSETLQLLQAHI YVAGNKIEEAKWILENYNYNRFAIGKDPVTNCYYLYLTALIRGKGSHIDRVLDEIGKTYM RHQDSWPLLSMIINLDPRYRNPYKKIEVLEQQFSFEIHEVLFYLAAYECYQEKPTLLKKL GKFEIQVLNFASKYRLMTKELALYVANFASQQKNYSDAMFRILERIYKMYSETMILNTIC TLLIKGNKTQQRYFEWYKRAVDAELKIAQLYEYYMVTIEEERVRGPLPKSIFLYFMHGNT LDYKKAAFLYANLITYEEEGSDLYLSYREQMVAFTWEQLEKRHITESLKILYKRFLREDE MTSERMEALHDICFAYEITTRVRNMNCVLVIEKDGNVRQRIPYDEEDGAVIFLYDKESRV VWESLEGRHYTDSIAYETKRLFYEPRFLDMYKKYAAHAGIWKHEEQKREATFDSIRELGT DAFDEKDIFRLCSKRIREDNYEEDEFLSFLCFELFKKEQYDKVTLTYLANYYCGATSDMK RLWKVLREYGIASNKVGERIITQMVFSEDMFMEEDIFEDYYLSDSVYFRLKQAYLAYVSR EFVLKGRETGRIVFDIIIHECEKKEELPDICKIALLKYFSARDYTVDEEPVLHEVLREMC EKQLVFPCYLNFKEAWLRENQLYDKAMIEYHAKPGSRVELHYKLKQGRKEELGYHMEVMT PAYENIYVKQFILYADESISYYFKETADKERITTEKKTLSNERKTAGTGKFGRLNEMSAM SPASRKKAMLLYREEEIMAEEIYKLY >gi|224461045|gb|GG657759.1| GENE 2461 2587597 - 2588880 1317 427 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1825 NR:ns ## KEGG: EUBREC_1825 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 7 407 10 403 412 206 29.0 2e-51 MNKGSMLGYDLNEKSCQISYYDETKDEPVTMEVAVDNYQIPLMLGYFKDRWVYGKEAKRL ATVNEGCTVTDLFNRAVRQEKVRVGAKTHDAVWLLAKFISLSLEEFDEITYITFSVPENN IDMTKMLKGIGRHLGIEKGHICVQDYKESFCHYMFYQPKELWQYESALFYCDAREIKAYM LRRLNAVAGRGNEMFVTVDEVASAQMKELEAIYPVLNVDKAKDADGRFKTFIQSVFEKKV VSSVYLTGEGFENNWYPNSLKVLCNGRRAFLGNNLYSKGACYTSIRRCRDYDEGPVYLDE TKMTEQICLRMRVDGQEGWYPIVSWGTHWYEADGQWEVILEDTSDVEIHIETLAAGDLQV ETVQLDGLPERKDYSLRLQIETMFLDERTCKLRLKDIGFGEFYPSSGFQVEKEIHLGGIN GQFNSMS >gi|224461045|gb|GG657759.1| GENE 2462 2588855 - 2589637 869 260 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1824 NR:ns ## KEGG: EUBREC_1824 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 251 1 255 259 122 32.0 2e-26 MGSLILCHKKKAKQPYEITRIHIRIYTIEELCYYICNNLYLIDYTIMNTQLCDWIEQELE LKALAERLRQEITQSCSAEQFVLTILKESTIYGQADINKIQSILEQLQNQNEVEREKYKA DSLLKSGEYASAILVYQAIVSREWDDSLDKAFYGRIYGCLGTAYGRLFLYEEAAKMYQEA YRLCEEPQMLKAYIYSCYRGMQDEKFVKMMSGNPAYLSTASLLKEDVKRIRREIDMDISK EQLDQWKKEYRRIDKNHGIC >gi|224461045|gb|GG657759.1| GENE 2463 2589741 - 2590610 1162 289 aa, chain + ## HITS:1 COG:SPy1274 KEGG:ns NR:ns ## COG: SPy1274 COG0834 # Protein_GI_number: 15675229 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 47 272 42 266 278 137 34.0 3e-32 MKRKLAVLLVLVMVAGMTAAGCGNKEDKKADAKTDSKEEKADNDDGTFVVGFDAAFPPYG YKDDNGEYVGFDLDLAQEVCDRNGWKLKKQPIDWDSKDMELSSGTIDCIWNGFTMNGRED KYTWSDPYVDNSQVIVVPEDSDIKEFKDLAGKMVEVQADSSALHTLESDDKEEGGQAELA ATFGALNQVADYNTAFMDLESGACEAIAMDVGVANYQIDSRGGGFRLLDEKLSTEQYGIG FKKGNEELRDTVQKTLNEMAEDGTLDKIVEKWADGGISADAVCLGKQAE >gi|224461045|gb|GG657759.1| GENE 2464 2590709 - 2591359 888 216 aa, chain + ## HITS:1 COG:lin1851 KEGG:ns NR:ns ## COG: lin1851 COG0765 # Protein_GI_number: 16800918 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 6 216 7 213 213 154 42.0 2e-37 MNMALILKQLAGGMVVSIEIFAATLIFSLPLGLIVSFGRMSRIKPVQWITKLYISIMRGT PLMLQLMVVYYGPYYLFGMRISATYRMTAVLIGFAINYAAYFAEIYRGGIESISEGQYEA ARVLGYTRPQTFFRIILPQVMKRILPSVTNEVITLVKDTSLAFVVAVPEMFTTAKQIAAA QTSMTAFVAAGIFYYVFNLVVAVVMEAIENKLNYYR >gi|224461045|gb|GG657759.1| GENE 2465 2591371 - 2592060 254 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 218 12 238 318 102 27 8e-20 MSLLEMHNIKKSFGETEVLKDISLTVEKGEVLGIIGPSGSGKSTLLRCATNLETPDSGEI RYEGTFGLVFQNFNLFPHYSVMKNIIDAPLKVQKRKKEEVIEEARMLLAKMGLHGKEDAY PYQLSGGQQQRVSIARALAMNPDILFFDEPTSALDPELTGEILKVIKDLAAEHMTMVIVT HEMNFAKNVSDHIIFMDNGYIAEQGTPEEVFGSSNERMQEFLGKFGQNL >gi|224461045|gb|GG657759.1| GENE 2466 2592110 - 2592223 73 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKNLYKADRNIAFPSALYYTYTCIRRIGACFHNNRR >gi|224461045|gb|GG657759.1| GENE 2467 2592273 - 2592980 1056 235 aa, chain + ## HITS:1 COG:CAC1391 KEGG:ns NR:ns ## COG: CAC1391 COG0152 # Protein_GI_number: 15894670 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Clostridium acetobutylicum # 1 232 1 232 235 297 68.0 9e-81 MQKLEQLYEGKAKKVFKTEDPDIVIVDYKDDATAFNGEKKGTIVGKGVINNRMTNYIFQV LEKEGVPTHFVEELSDRETAVKRVEIVPLEVIVRNVAAGSFSKRLGIEEGTNLLAPTLEF SYKDDDLGDPLINDYMAIAIGASTREEIEKITEYTFKVNEVLKKFFAEAGIELIDFKIEF GRFHGDVILADEISPDTCRLWDINTHEKLDKDRFRRDMGNVEDAYQEVFRRIGIK >gi|224461045|gb|GG657759.1| GENE 2468 2592999 - 2594426 1663 475 aa, chain + ## HITS:1 COG:MJ0204 KEGG:ns NR:ns ## COG: MJ0204 COG0034 # Protein_GI_number: 15668376 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Methanococcus jannaschii # 15 465 2 462 471 454 49.0 1e-127 MNQFEQVTTGMGEECGVFGAYDMDGGNVAPTVYYGLFALQHRGQESCGIAVTDTYGERKV RSKKGLGLVNDVFDGESLEELKGNLGVGHVRYSTAGGSRAENAMPLVINYVKGTLVIAHN GNLTNAIELRRELEYTGAIFQTTIDSEVIAYHIARERLNVGKAEDAVKNAMKKIRGAYAL VVSSPRKMIGARDPFGLKPLCIGKRDNTYILASESCALSAVGADFVRDVEPGEIVSFTKN GIESDRSMAIPADKQARCIFEYIYFARTDSTLDGVNVYHARITAGRALAKSYPVEADLVV GVPDSGLVAAKGYSEESGIPYGMAFHKNSYVGRTFIKPSQSERESSVKIKLNVIEEVVRG KRIVMVDDSIVRGTTCANIIKMLKKAGALEVHVRISSPPFLYPCYFGTDVPSNEQLIAHA HTPKEIQKMIGADSLGYMEIDRLKEMVGDLGYCDACFTGNYPMEVPGRDVSQAFE >gi|224461045|gb|GG657759.1| GENE 2469 2594477 - 2595910 1756 477 aa, chain + ## HITS:1 COG:CAC1821 KEGG:ns NR:ns ## COG: CAC1821 COG0015 # Protein_GI_number: 15895097 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Clostridium acetobutylicum # 4 477 3 476 476 637 65.0 0 MSTDRYVSPLSERYASREMQYIFSPDKKFRTWRRLWIALAETEKELGLPITEEQIEELKE HADDINYEVAKEREKLVRHDVMSHVYAYGQQCPKAKGIIHLGATSCYVGDNTDIIIMAEA LEIVRKKLVNVIAELAEFADEYKALPTLAFTHFQPAQPTTVGKRATLWMQEFMMDLEDLE YVKGSLKLLGSKGTTGTQASFLELFDGDQETIDRIDPMIAEKMGFKACCPVSGQTYSRKV DTRVVNVLAGIAASAHKLSNDIRLLQHLKEVEEPFEKTQIGSSAMAYKRNPMRSERIASL SRYVMVDALNPAITSATQWFERTLDDSANKRLSVPEGFLAVDGILDLCLNVVDGLVVYPK VIEKRLMSELPFMATENIMMDAVKAGGDRQELHERIRELSMEAGKNVKEKGLDNNLLELI AADPAFNLSEEELKKTMDPSRYTGRAALQVEAFLKDTVAPVLEANKDVLGMSAEINV >gi|224461045|gb|GG657759.1| GENE 2470 2596232 - 2597596 866 454 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 3 448 2 442 456 338 40 9e-91 METLNNIVLTIQHYLADYILIAALLLGGIWFTVRLGFIQVRGFKEGMKRTFGGLFRKKGE AGADGMSSFQALATAIAAQVGTGNIAGAATALAIGGPGAIFWMWVAAFLGMATIFAEAIM AQKYKCVGEDGVVTGGPVYYIRAAFKGTFGKVLAGIFAVLIIFALGFMGNAVQSNSIAAA FRTAFGVPQAVMGIVIAVLALAVFMGGMKRIAKVTETIVPIMAALYIVGALIVIIYNYRN IPYAFHAIIVGAFSPSSIAGGAVGATIKLALTKGVARGLFSNEAGMGSTPHAHAVAKVDH PVEQGFVAMVGVFIDTFVVLNLTALVIITTKSIPTGKTGAELSQYAFSTLFGKGGDIFIA VCMFFFAFSTIVGWYFFGQANIKYLFGAKAVKVYSLLVAACVVLGSLAQVDLVWNMADCF NSMMVIPNILGLFALSGVIKKVHDDYYKNFLNKK >gi|224461045|gb|GG657759.1| GENE 2471 2598041 - 2598424 344 127 aa, chain + ## HITS:1 COG:no KEGG:Shel_25250 NR:ns ## KEGG: Shel_25250 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 4 124 8 129 131 107 42.0 1e-22 MQNRYIIITNNPLVPEKIGGTHNVEYKEISYEEVLRTVRDRIHEGHTLLSHPLSGSVKPN ETPYKSIMLSAGKGEVDPGSVVIIENAIEACRKFVFKSDKYKPEVYDDFQMIDWTLLESA ITSADVM >gi|224461045|gb|GG657759.1| GENE 2472 2598496 - 2599776 1744 426 aa, chain + ## HITS:1 COG:no KEGG:Shel_25240 NR:ns ## KEGG: Shel_25240 # Name: not_defined # Def: glycine/sarcosine/betaine reductase component B alpha/beta subunit # Organism: S.heliotrinireducens # Pathway: not_defined # 1 426 1 426 426 651 78.0 0 MKLEMGHIYIKDIQFAAESKIEDGILYVSEEAVKAVALEDEKIKSVSFDIAKPGESVRIT PVKDVIEPRVKVEGKGGIFPGVISKVDTVGSGKTYALKGMAVVTAGKIVGFQEGIIDMTG PGADYTPFSKTLNLVMVCEPVDGIKPHDYEKAVRFAGFRVAVYIGELARSLTPDETKVYE TYTVKEGMEKYPDLPRVAYVQMLQSQGLLHDTYVYGVDAKKVLPTILNPTEIMDGAIVSG NCVSACDKNPTYVHLNNPVVHDMFEEHGKTINFVCQIITNENVYLADKQRSSDWTAKLCK MLDLDAVIVSQEGFGNPDTDLIMNCKKIEAEGVKTVIITDEYAGRDGKSQSLADADAAAD AVVTGGNANQVIILPKLDKVIGTLDYVTKIAGASEETLREDGSLEVELQVLTGATNETGF NKLSAR >gi|224461045|gb|GG657759.1| GENE 2473 2599795 - 2600847 1121 350 aa, chain + ## HITS:1 COG:no KEGG:Shel_25230 NR:ns ## KEGG: Shel_25230 # Name: not_defined # Def: glycine reductase, selenoprotein B # Organism: S.heliotrinireducens # Pathway: not_defined # 1 350 1 350 437 508 73.0 1e-142 MSKIKVVHYINQFFANIGGEEKADYPAELRVGEVVGPGMAFNMNFKDEAEIIATIVCGDS YFNENLEKAKADILAMVKEQAPDVFIAGPAFNAGRYGVACGTIAAAVQEELGIPAITGMY VENPGADMFKNQVYMVSTKNSAAGMRDAVAKMAPLALKLARGEAVGASCQEGYMPNGVRV NFFEEERGSKRAVNMLLKKLADKPFETEYPMPNFDRVDPNPAIKDLAHAKIALVTSGGIV PKGNPDHIESSSASHYGEYDITGVMDLTEETYETAHGGYDPVYANEDSDRVLPVDVLRDM EKEGKIGELHHLFYTTTGNGTAVASSKAFAAEFSQKLLADGVDAVILTST >gi|224461045|gb|GG657759.1| GENE 2474 2600875 - 2601105 152 76 aa, chain + ## HITS:1 COG:no KEGG:Shel_25230 NR:ns ## KEGG: Shel_25230 # Name: not_defined # Def: glycine reductase, selenoprotein B # Organism: S.heliotrinireducens # Pathway: not_defined # 1 75 361 435 437 130 84.0 2e-29 MVKEVERAGLPVVHVCTVTPISMTVGANRIVPAIAIPHPLGNPALDKDEEKALRRQIVEK ALDALTTEVDGQTIFD >gi|224461045|gb|GG657759.1| GENE 2475 2601176 - 2602120 566 314 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 4 304 1 297 306 222 41 6e-56 MSKIYDVIILGAGPAGLAAGLYAGRSRLSTLIIEKGQDGGQIAITDEIENYPGQIVDGES GPSLIARMTEQAEKFGAERISDTITEVQLDGEVKVLKSAKAEYQAKNIIIATGAYSRPIG CKGEAEFMGKGVSYCATCDANFFEDFEVYVVGGGDSAVEEAMYLSKFARKVTIIHRRNEL RAAKSIQEKAFANPKIDFFWDSVVEEIYGDDILQGMIVKNVKTGETRKVEADPEDGMFGL FGFIGTVPNSKLFEGIVEMDERGYIKTDDDMHTNVPNVYAAGDVRIKSLRQVVTAAADGA IAAVQVERSLSDYF >gi|224461045|gb|GG657759.1| GENE 2476 2602133 - 2602450 530 105 aa, chain + ## HITS:1 COG:Cgl3031 KEGG:ns NR:ns ## COG: Cgl3031 COG0526 # Protein_GI_number: 19554281 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 102 4 105 107 66 33.0 1e-11 MIDVTKETFEEEVLKAEGYVFVDFYGDGCVPCQALMPKVHEFADTYGDKMKFTSLNTTKA RRLAIAQKVLGLPVMAVYKDGEKVEEVVKDDATPENIEAMIKKYI >gi|224461045|gb|GG657759.1| GENE 2477 2602515 - 2602646 130 43 aa, chain + ## HITS:1 COG:no KEGG:Amet_3592 NR:ns ## KEGG: Amet_3592 # Name: not_defined # Def: glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.3 1.21.4.4 1.21.4.2) # Organism: A.metalliredigens # Pathway: not_defined # 1 43 1 43 158 70 74.0 2e-11 MAILEGKKAIIIGDRDGIPGPAIAECVKTAGAEVVFSSTECFV >gi|224461045|gb|GG657759.1| GENE 2478 2602662 - 2602985 213 107 aa, chain + ## HITS:1 COG:no KEGG:Shel_25200 NR:ns ## KEGG: Shel_25200 # Name: not_defined # Def: glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4) # Organism: S.heliotrinireducens # Pathway: not_defined # 1 107 50 156 156 162 78.0 5e-39 MDLENQKRVKEFADEYGAENLVVVLGAAEGEASGLAAETVTAGDPTFAGPLTGVQLGLKV YHVCEPEMKEEFDEEVYDEQISMMEMVLDVDDIINEMTAIRDQFCKF >gi|224461045|gb|GG657759.1| GENE 2479 2603043 - 2604581 1733 512 aa, chain + ## HITS:1 COG:no KEGG:Shel_25190 NR:ns ## KEGG: Shel_25190 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 1 510 1 508 514 692 64.0 0 MNSVIKGASYVLVHTPDMVLYNGTTQTTEKIVNPDSDYLKEVPKNLRSYKEAVEYWPNQT YIGNVHPDELAEVEFPWYDKKKEGADRFGKYGEIMPQEEFLFLVQASDMFEVVRLDKEFV ARYKDAFASNPVISEDIVEKIHEGVDISEIEHFVSEEHAEGLYHDGKLVGCVKRAHDIDV NLSAHVMHENLMSKASSVLALLHAVRNAGIEKAEVEYVIDCAEEACGDMNQRGGGNFAKA AAEVAGLVSASGSDARGFCAAPAHAVIEAAALVKSGAYKTVVVTSGGCTAKLGMNGKDHI KKGLPILEDCLGGFAVVISENDGVNPEIDLNMLGRHSVGTGSAPQAVIGSLVTDSLDKAG MKIPDIDKYSPEMQNPDITKPAGAGDVPLANYKMIAALAVKRGELEKKELAAFTKEHGLT GWAPTQGHIPSGVPYIGFAREDILSGKIRNAMIIGKGSLFLGRMTNLFDGVSFVIHGNTA EAESAASGVSEEEVKGLIAKAMKDFAATLMAE >gi|224461045|gb|GG657759.1| GENE 2480 2604594 - 2605748 1379 384 aa, chain + ## HITS:1 COG:no KEGG:Shel_25180 NR:ns ## KEGG: Shel_25180 # Name: not_defined # Def: fatty acid/phospholipid biosynthesis enzyme # Organism: S.heliotrinireducens # Pathway: not_defined # 4 383 3 381 382 467 69.0 1e-130 MADNIEKMIASTFMEMAEGLETGSFGKKPKIALTGMGSEHGEENSIAAAAAAAREGIDVY YIGTLEAEGVTTVKVADEDEGHKKMEELLKNKEVDGAVTMHFPFPIGVSTVGRAITPSKG REMYVATTTGTSSADRIEGMIKNAIYGIIAAKTCGNADPTVGILNVDGARQTEIALKQLK ENGYDITFAESARADGGCVMRGNDVLQGSPDIMVCDSLSGNILIKMLSSFTTGGSYEASG YGYGPGIGEGYDQLVMIISRASGAPLITGAIRYAAQLVRGKVFEVAKKEFEAANKAGLKD ILAARKASEKQTGDSEEVSAPPKEPVTSQIAGIEIMDLEDGVKALWKIGVYAESGMGCTG PIILVSDANLVKAEEELKKAGFIN >gi|224461045|gb|GG657759.1| GENE 2481 2605873 - 2606856 857 327 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570434|ref|ZP_03779459.1| ## NR: gi|225570434|ref|ZP_03779459.1| hypothetical protein CLOHYLEM_06534 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06534 [Clostridium hylemonae DSM 15053] # 1 327 4 330 330 653 99.0 0 MEDVLTLRTVGRRTRISAGHITAVILLILFVCCLYIIGLGQAVPGTVSSGLENVEDTDIQ MPGPRPKQPDVKPFRRILDHPEEIGIVILPGKEPAKDRMKDMAAADKLKPDKAGSQDRPV TVPGSSAAEEEVPDDGTGVSISVHVTFHGNGGTLSVTEMTLEEYYLDLSALENPRRLGKE FDGWYIDPSCTTAFTGIEEGQTRVDLYAGWKEITTYICDDRGYITGYSDAAAVADEGTII LPNSPDCLGVEAGAFAGLEYEIFEVFIPPNIIYIAPGVLESFPYLMYIEVMAGNPAFYSD GGVLYKADGTLYVFPAGRDNWGAGDND >gi|224461045|gb|GG657759.1| GENE 2482 2607000 - 2608232 1234 410 aa, chain + ## HITS:1 COG:CAC3445 KEGG:ns NR:ns ## COG: CAC3445 COG0454 # Protein_GI_number: 15896686 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 145 1 144 147 158 53.0 2e-38 MNIRQITEDKKAYLDLLLLADPQENMIERYLDGGEMFVLCDREQVMTVAVVSVLKNRKCE LKNIATRPEYQGKGYARYMIHYLCEHYSNRCDTMYVGTGNCAKSIGFYEKCGFVNSHIIM NFFIDNYDEPIYEDGKLLTDMVYLKKYLDSEVDVKKVVNLALEAGRILLKNGGEIFRVEE TITRICNRFHVEKVDIFTLSHGIFVSAENGVQEAYTKVKHVPLSAPHLGIVAEVNDLSRE ISAGRVGVDEALKRLEEIDHMPPKRGYFQILAAGAGSGFFGFLLGASALESVIAFCIGCL LYMWVLAGKRHHMSKIIINIAGGVIITALAIVAVHLPFPETVRLEGMIIGSIMPLIPGVA FVNAIRDIADSDFLSGTVRMIDALLVFVYIAIGVGITLSIYNNMLGGLAL >gi|224461045|gb|GG657759.1| GENE 2483 2608229 - 2608699 573 156 aa, chain + ## HITS:1 COG:SA0542 KEGG:ns NR:ns ## COG: SA0542 COG3610 # Protein_GI_number: 15926263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 7 131 5 131 150 79 36.0 3e-15 MIHDIFMNVVCPFIGTIAYAVLFNVPKRYYLSCGMTGTAGWLVFALSGAYTSSAVAAFLG ALVVVLISRMLTVKMKCPITVFLVSGIFPLVPGAGIYYTAYYLVTNQLSLAAQKGLDSIK IAFGIVLGIVFIVSVPREFFQVRYWKERRTGKGWSK >gi|224461045|gb|GG657759.1| GENE 2484 2608752 - 2609492 840 246 aa, chain + ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 6 242 10 242 245 157 34.0 2e-38 MLGKTLLDILKESRYTTVLSGFGMLLESGYPAIRDGDESYDVELKYGYSVEEIFSSSFYS TRKEQFYEFYRSEILKMLEKPPGKCFYEMAELEKRGLIQSVITRRIYGLPQRAGCKNVIN LHGSVYDNYCPHCGKEYPVEYIVNSARIPLCEVCSTPIRPRICLFGEMVDNRIITKAAEE VRKADVLLVLGTNLKTYLCSQLIDYYEGDKLVLINPEKHFSDKLADVAVHKSVEDALGEI LKELGE >gi|224461045|gb|GG657759.1| GENE 2485 2609495 - 2610127 645 210 aa, chain + ## HITS:1 COG:CAC0990 KEGG:ns NR:ns ## COG: CAC0990 COG0008 # Protein_GI_number: 15894277 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 2 210 4 209 485 301 70.0 8e-82 MSKVRTRFAPSPTGRMHVGNLRTALYAYLIAKHEGGDFMLRIEDTDQERFVDGALEIIYR TLEKTGLVHDEGPDKDGGVGPYVQSERNASGLYMKYAEQLVEQGDAYYCFCDKERLDSLR SRVSESGTEIVTYDKHCLNLSKEEMEANLAAGRPYVIRINMPAKGTTTFHDDIYGDITVP NEELDDMILMKSDGYPTYNFANVIDDHLMG >gi|224461045|gb|GG657759.1| GENE 2486 2610231 - 2611049 937 272 aa, chain + ## HITS:1 COG:CAC0990 KEGG:ns NR:ns ## COG: CAC0990 COG0008 # Protein_GI_number: 15894277 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 1 272 213 485 485 334 57.0 1e-91 MVRGNEYLSSAPKYNRLYEAFGWDVPTYVHCPLITDENHKKLSKRCGHSSYEDLLEQGFV SEAVVNYVALLGWCPEDNQEIFSLDELVKAFDYRHMSKSPAVFDVVKLRWMNGEYLKAMD FDRFYEMAEPYIKEVVTKDYDLKKIAALVKTRIEVFPDIREQIDFFEELPEYDTAMYCHK KMKTDEEKSLEVLRDILPVLEAQDDFSNDALFAALKGYVDAKGCKVGFVMWPVRTAVSGR QNTPGGATEIMEILGKEESLRRIRRGIELLSR >gi|224461045|gb|GG657759.1| GENE 2487 2611059 - 2612900 1801 613 aa, chain + ## HITS:1 COG:CAC1003 KEGG:ns NR:ns ## COG: CAC1003 COG0210 # Protein_GI_number: 15894290 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Clostridium acetobutylicum # 28 613 96 675 732 322 33.0 1e-87 MGLNSAQSKAVAHHDGPCMVLAGPGSGKTLTIAKRIEYLIRKHKVRPEEILVITFTKYAA NEMKSRFLAVMKEPLAVTFGTFHGIYYGILKWAYGIGQSNLLTEEERYNLLRQIASASHT DEALTEEEEKDYLKELAAEIGKIKNDRLDIRAYESERFGKERFQSIYRDYEDAKKKWNKI DFEDMLLLCCRLFLERPDVLEKWQRKFRYILVDEFQDINQVQYDVLRMLAAPEDNLFVVG DDDQSIYGFRGARPGIMAEFKKDYPQAGQILLDVNYRSTSHIVNGALRVIGHNQKRFKKA VRSGKKQGETVHVQEVKDSVEEGAYVVGQIRELVRQGVPLSGIAVLYRTNLDARALSECL MEYQIPFCMKEYMDNIYDHFIARDISSYFHLVLKEFERTYFLQIVNRPNRYIGRDSMSGE PVTFESLRRFYCDKQWMMDRIDQMEWDIKMMENKSPYLAIQYMRKSIGYDEFLKDYAAYR QIPAEELFKVLDEIQELSRGSGTIGEWFAHVEKYGAMLKEQRKKSRETKESAALMTMHGS KGLEYDTVFIIQGNEGVVPYKKAKTEDEIEEERRLFYVAMTRAKRKLIISYVKEKNGKEA APSRFVNELFLNV >gi|224461045|gb|GG657759.1| GENE 2488 2612883 - 2613218 482 111 aa, chain - ## HITS:1 COG:no KEGG:Closa_1312 NR:ns ## KEGG: Closa_1312 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 18 106 16 103 114 75 61.0 8e-13 MSEQQHNCGHDDCCGHDEAPMVTLTLDNDEVVNCAILTIYEAGENEYIALLPLDENGESE EGDVYIYRYKETAPGEPELENIEDDDEYEIAADAFDEWLDTQEFDESDIEE >gi|224461045|gb|GG657759.1| GENE 2489 2613315 - 2613416 104 33 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570442|ref|ZP_03779467.1| ## NR: gi|225570442|ref|ZP_03779467.1| hypothetical protein CLOHYLEM_06542 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06542 [Clostridium hylemonae DSM 15053] # 1 33 49 81 81 69 100.0 6e-11 MAGTCEKCSQNSENGVKYICAFEKIMHKEDKIL >gi|224461045|gb|GG657759.1| GENE 2490 2613413 - 2614423 1320 336 aa, chain + ## HITS:1 COG:CAC1453 KEGG:ns NR:ns ## COG: CAC1453 COG1879 # Protein_GI_number: 15894732 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 54 336 46 325 325 155 33.0 1e-37 MMKRRMLSVIAVLLICIFALSGCKKNVGTPEDNAVKDEEADEDTDGEDEDAYVFGFSVID MQNPYFITLEGATREAVESGGYRMITKDPASDAAAQAAQIQEMIAEGIDAVFLCPVDWEE ITDSLKALKDAGVRIINVDSQVKEMEYVDAYIGSDNHNAGFICGEDLIEKRPDGGKIAIL ECPTQNSINDRITGFEEAIADAEKGFEVVAREDTGGEFDRALEAAEKILKENPDITAIMC GNDQIAVGAMTAVNLAKMEDVIIYGVDGSPDIKKEFKKAGCQIAGTAAQSPINMGKTAAK TGISILKGEEFEREVYEEVFMINKDNVDMYGVDGWQ >gi|224461045|gb|GG657759.1| GENE 2491 2614439 - 2616130 1380 563 aa, chain + ## HITS:1 COG:slr1857 KEGG:ns NR:ns ## COG: slr1857 COG1523 # Protein_GI_number: 16330244 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Synechocystis # 6 563 20 707 707 396 34.0 1e-110 MRAVEGKPLPLGVTITESAVNFSVAVPEGRTCSLLLYEPGGCEPYWSVPMEQSAGEVRFT ALEGIEAGGLEYNYMFDEEIVVDPYAGALAGRSVWHRECDIQKHEVRGIVRTESYDWEGD TPLHIPYNEVTAYSLHVRGFTMHSSSKARHKGTFAGVAEKIPYLKELGINQIHCMPVYEF EECMQYTNYWGYGDAFFFAPKSAYSVSGDGVSELKDMVKACHKAGIEVVLEMPFTDKTPK QLMVECLRYYMLDYHIDGFILNPAVAPMETLYGDPILKKTKIMRHDMGFQTVMRRFLKGD EGMVGEVIYWLRHNSRPDGIFNSITCHNGFTLNDLVSYDGKHNEANGENNQDGPDYNYSW NCGAEGPSRKKAVNELRRRQMRNAFFLLLLAQGTPCILAGDEFANSQKGNNNVYCQDNPT GWLDWNKAAKEQELFHFVKELIALRKKHPVLYPPKEAEGTDMLCCGMPDVSYHGENAWKV PSEVSSRQLGVFYYGAYADDEDCFVVYNMHWLPHTFALPSLAKGRKWYVAASTEDGVLAD YRSLKNQRLLEVKERTVILLAGR >gi|224461045|gb|GG657759.1| GENE 2492 2616133 - 2616795 691 220 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1055 NR:ns ## KEGG: EUBREC_1055 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 217 1 252 260 135 36.0 1e-30 MEWIRNKIGLTSFQLKCIAIISMVIDHTGAILYPDEMIFRYIGRIAFPIFCFLLVEGFCH TGNVYRYMRRMLVFAFVSEIPYDLAFQGRILEFGHQNVFFTLFLGVILMWALQRAGEWPE KAAEIVLVMWIAGILKTDYSYTGILLIAVFYLLRDGLWIKLAAGTAWCFIWNGFVQKYGA LAMIPVALYNGERGRSMKYFFYAFYPLHLLILYGISRWMI >gi|224461045|gb|GG657759.1| GENE 2493 2616824 - 2617381 531 185 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1818 NR:ns ## KEGG: EUBREC_1818 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 177 1 181 200 211 62.0 1e-53 MKAWQHFCTINHHKMLVMKQCFKVGLYKQGLLHDMSKYTPSEFLVGCKYYQGTRSPNNAE REATGYSSAWLHHKGRNRHHYEYWIDYSADPKEGIVGQKMPTRYVVEMFMDRIAASKTYM KEAYTDAHPLEYYEKGAAKLGRMIHKDTAALLHHLLKMLAEEGEEKTFAYIRKEILKKKR KGKQR >gi|224461045|gb|GG657759.1| GENE 2494 2617403 - 2618284 1037 293 aa, chain - ## HITS:1 COG:BH2117 KEGG:ns NR:ns ## COG: BH2117 COG0583 # Protein_GI_number: 15614680 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 3 283 5 286 290 132 28.0 7e-31 MNKYEIIISVCDTHSISKTAASLNYTQSAISQAIKNFEKELGFPLFKRSKHGMELMPNTE EIIASLKVICREKKKIRQIAANLTSLDSGYIRIGTIQSISYHWLPDILKQFSGLYPNIRF EMTVDGFNPLKEMLQAGRLDCIFVSRYSVPELPFIPMGNDELMLVTPKTHPLAEKIAVSL TDVNNENFVLSSDGLDYETGNIFKLNDIKPRIRYRLNEDFATLKMVEKGFGITILPRLLL YNAPFDVCTRSFTEHYSRILGVACPKDAPPTPATLKFLDYVEEWSMSLKNSAG >gi|224461045|gb|GG657759.1| GENE 2495 2618509 - 2620179 1910 556 aa, chain + ## HITS:1 COG:MJ1276 KEGG:ns NR:ns ## COG: MJ1276 COG0129 # Protein_GI_number: 15669462 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Methanococcus jannaschii # 8 546 17 559 561 402 41.0 1e-112 MGTEFWNGAEAAHRRVMMKAAGYSDKDIRKKPHIGVPNSYMAGSPGSAHLRQIAEAVKEG IWAAGGVPVEFGIPATCGNIANGAEELKYEQVGRDIVAMSVEFVTRVHNFDGLAMIASCD NIIAGCYLAAMRLDIPSMIVTGGSMQPGQYCGKTVVEADLDAARFSGADEEALMDMEDNV CPSFGACPSMGTANTMQMLGEVLNLVLPGTSTIPASDNAKLRKAREAGMYAVEMAKAGRK PSELITKEVLLNSIMFDMAVAGSTNAVLHILSYGYELGIELTLEDFEKYAKEIPCINAVV PSGPYTVVDFHYAGGVMNVMKMLESKLFTDVPGMYGTSWAEMLAKVKPQENKVIHSLERP LSQEPGLKILRGNLSPNGAIVRPTAVYEEVKYMKGKAKVFEGDRAAFEAIQAGEIVPGDI IVIRYEGCKGAPGMKELMLSIDALIGLGLHKSVGLISDARFSGFNFGAIIGHVSPEAYDG GNIALVENGDEIVIDIPGGEVSMLVSDEELERRREKWVCPPLKEEKGCLNIYAKMCRPAE EGGAMQPWGLDARFKR >gi|224461045|gb|GG657759.1| GENE 2496 2620642 - 2621565 521 307 aa, chain + ## HITS:1 COG:no KEGG:BALH_3339 NR:ns ## KEGG: BALH_3339 # Name: not_defined # Def: triple helix repeat-containing collagen # Organism: B.thuringiensis_AlHakam # Pathway: not_defined # 31 178 783 936 1269 124 48.0 5e-27 MEENTGFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGANGNWHIGETDTQVPATGP KGDKGDTGPMGPQGLTGAAGPQGATGPQGLTGPQGPTGATGPQGATGSKGDTGVAGPQGP TGATGPKGDPGIAGPQGAKGDKGDAGAAGAQGPQGPKGDKGEQGPAGPVNIVNNLDTTEE GYALDARQGKELGDKVTDLEGRLSSYIVDSRIVNGITYEKWSDGRLRMHGKGTSSSQAFA TITFPVSFINTQYHMVAVAEYYSSSYISFLCSVQPIKPSFGYVYTRQHNGEAISGVSFHW IAEGRWK >gi|224461045|gb|GG657759.1| GENE 2497 2621722 - 2625129 3201 1135 aa, chain + ## HITS:1 COG:CC0896 KEGG:ns NR:ns ## COG: CC0896 COG5001 # Protein_GI_number: 16125149 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Caulobacter vibrioides # 120 540 224 641 677 192 31.0 2e-48 MKVLKSLSEENLQSNIESSMFIMELGSEKCFWSKGFLLAMEPPKKNESPEHFFASVLHED DIGRFMRDYRKIADGTFCSCANSYRMRDMGGCYQNMSVKLWTAGEECTETRKYLAGIIAE ADNYGNLDPVTLLPNNYSFRKYLYEEVKKKENWAVIMLGIDDFTNINELFSYSTGNLLLQ DCARRIQQLLPDNAGLFRLDGDGFGVVLYGCDEEGVKAWYEELKKSCITEKFNAKGYKFF LTISGGSCCFPKDGNDFETIYRNASKALQTSKKNGKNCLVVYSEELAEKDRRKATLLSAL RESVVLGFKGFYMVYQPIVSAENQTLVGSEVLLRWDSPYFPEEEISPVEFIPVLEENGLM LETGRWVLETAIRQCAEWCRYKPDFQMNINVSSLQFEVPSFKYLLMEMLTEYEVKPANIT LELTESGKVKDPLVLGRQFDFIRGQGIHIALDDFGTGYSSLEILRLLSADELKIDRSFLE RISYDVTDQALLSTLVSLSRNMNMEVCVEGIENSKMEKHVCSLNPDLLQGFLYSHPLRAK DFEAKYFDGIPVDRQTRTSSRPEHSQSLVYASFRPAQSMSSQEMIDSAYAGIFQVGMDEE FSLLTCNEGYRRMLGYTAQEVEKKFKNHALGLVHPDDIKYVNEEIRRQLGESDTVTIEFR VVRKDGTPIWIVGTGNVYHSNDGSASLVVVIINNDENKRRQLSMEREHAMSKNILNNLPT GVKCVRFDADFTIDYISDSMLGLTGYTREDIRELFDNKYINLIYEEDRAAVTNDILEQLK VSNVVTMRYRTPCKDGRYIWLETISKLCEAGEDGIQRAYSMVMDITDNGEEKKDTDRGLK IANRYEMVAEQLGEYFMEYDFDSDKAVFSDNFNRVFGYQGEISLAELMTRVHEEDIPELQ KRIDEAKGGTRPDSVELRLFIPGKTYRWFSVTMTIPEKFGDKPMTVLAKLTDIDEEKKEI EQLRLKSQHDSTTALLNKAATEDRIRALLDGAGPDEHYVFFMIDIDHFKRVNDMYGHFTG DEVLRSLAQRIRGRFRGEDIIGRIGGDEFLVFMSYSGDIQEVISKARLLVDVLHQPIQVD GETVKATVSVGASCYPEDGKDFYNLYRRADSALYRRKSMNRDGFCLAARFEPPAE >gi|224461045|gb|GG657759.1| GENE 2498 2625429 - 2626973 1740 514 aa, chain + ## HITS:1 COG:MA2391 KEGG:ns NR:ns ## COG: MA2391 COG2326 # Protein_GI_number: 20091222 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 1 506 67 567 569 446 47.0 1e-125 MLEKLDLTKSLSKSEYKDKMLELEPKLGKLQRECRELGIPVMIAFEGYGAAGKGVQIGEL IQALDPRGFEVHAVKNETQEERMHPFLWRFWTKMPSSGRIAIYDSTWYRKVLVDRFDKKT KKKELSAAYDSICSFEQQLADDGMVLIKIFLAIDRKEQKKRFEKLLESQETAWRVSKGDL KRNKEFARYEKMNEDMLARTDTDYAPWNIVEATDRRFAAAKIYSIVIQALSERIDCVKRA QEEKENVKVYTSEDLQEMSKEEAGKDKKLGESILAKADLSLSYSKEEYKKRLDKLQSKMA KLHGELYRRRIPVVLGFEGWDAGGKGGAIKRLTARMDPRGYVVHPTASPNDIEKAHHYLW RFWTAMPKAGHVTIFDRTWYGRVMVERIEGFCTRAEWQRAYKEINDMEKDLTDAGTVVIK FWMQIDKDEQERRFKARQENPEKEWKITEEDWRNREKWDQYEEAVNEMLIRTSTPKAPWV VVEGNCKYYARIKVLETVVDAIEKRLASEKRDGR >gi|224461045|gb|GG657759.1| GENE 2499 2626970 - 2627992 791 340 aa, chain + ## HITS:1 COG:no KEGG:ELI_0698 NR:ns ## KEGG: ELI_0698 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 4 340 5 346 346 370 52.0 1e-101 MRNHEVTKRQPLLREDGTLTEPGWSKKLLQQYDRSRIKAPKFRIKEWDYYLVLNEEFAGA FTISDDGYIGLQSVSLLNFKEGWEHTETILNPFPMGRFALPPTSEAGDTSYRDKRLQMRF LVSKGQRRIVCDFDRFYDGKPFSCDILLHQPEMDTMVIATPWKEKKTAFYYNQKINCMRA EGTMQYDGRTYTFAPETDYGTLDWGRGVWTYDNRWYWGSGNMTVDGVPFGFNIGYGFGDT RAASENMLFYGGICHKLEDVTFHIPEGGYMKPWKFTSSDGRFEMDFTPVLDRAAKTSALV IVTDQHQVFGRMSGRAVLDDGKVIEVKDMMCFAEDVHNRY >gi|224461045|gb|GG657759.1| GENE 2500 2628011 - 2629018 1131 335 aa, chain + ## HITS:1 COG:RSc2968 KEGG:ns NR:ns ## COG: RSc2968 COG0232 # Protein_GI_number: 17547687 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Ralstonia solanacearum # 14 331 17 385 387 234 40.0 2e-61 MTIREQLELREIEYLSPYAALSKDSGGRKKEEEECDIRPVFQRDRDRILHCKAFRRLKQK TQVFLLPKGDHYRTRLTHTLEVSQNARTVAKALRLNEDLVEAIALGHDLGHTPFGHAGER ALNEVNPAGFRHNEQSVRVVECLEKQGEGLNLTTEVLDGILNHKSSGRPRTLEGQIVQLS DKIAYINHDIDDAVRGGILKEEDIPAKYTDILGNSTKVRLDTMIHNVITNSMDQPKISMS PDVREATLGLRRFMFENVYQNPTAKGEEVKAVNMITNLYEYYIRHLKLLPEQYLSMMEES GESREQIVCDYIAGMTDTYAVKKFEEFFVPESWKI >gi|224461045|gb|GG657759.1| GENE 2501 2629124 - 2630893 1931 589 aa, chain + ## HITS:1 COG:CAC1299 KEGG:ns NR:ns ## COG: CAC1299 COG0358 # Protein_GI_number: 15894581 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Clostridium acetobutylicum # 4 493 7 494 596 337 38.0 4e-92 MYYSDDLIEEVRAKNDIVDVISGYVKLQKKGSSYFGLCPFHNEKSPSFSVSRQKQMYYCF GCGAGGNVFTFIMEYENYTFLEALRYLAERAGVELPEQDESEESRKKAGVRSTLLEINKL AAQFYYAQLKDPRGEHALSYLKQRELSDETIRAFGLGYSGKSGKELYRYLKSKGYSDDIL FKAGLIAFNEKSGPYDKFWNRVMFPIMDANSKVIGFGGRVMGDGQPKYLNSPETMIFDKS RNLYGLNRARTFRKPYFLLCEGYMDVISLHQAGFGNAVASLGTALTSGHASLIRRYVEEV YLTYDSDEAGTKAALRAAPILKEAGITARVIRMEPYKDPDEFIKNMGAEAFEERIGKARN GFMFGLEVLEKQYDMKTPEGKTEFMREAATRLTEFDEEIERNNYIEAVAGAYHVGYEDLR KLVGRMAVQKGLAKPVVRAKTASGREKENGIVKSQKILLTWLIEEETIFRQIEKYIKPSD FTGELYRTVAQLLYEQYEAGEVNPAKLMNHFTDEEEHREVAGLFHTKIKELSTAAEQEKA LKETVMRVKSHSIEEATHNLEPADIQGLQRLMEDKRALQDLEKLHISVN >gi|224461045|gb|GG657759.1| GENE 2502 2630933 - 2632045 1306 370 aa, chain + ## HITS:1 COG:BH1376 KEGG:ns NR:ns ## COG: BH1376 COG0568 # Protein_GI_number: 15613939 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Bacillus halodurans # 1 370 9 372 372 432 68.0 1e-121 MEENTVKFEEKLKELVSLGKKKKSILELQEINDFFSDMELESEQMERVFEHLEANNIDVL RISGDDDDIDDADIIISEEDEVDVEKIDLSVPDGISIEDPVRMYLKEIGKVPLLTADEEV DLAKRMADGDEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYH KGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPTPEE IAAELDMPVERVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPAEAAAQTLLKE QLDEVLDTLTEREQKVLRLRFGMNDGRARTLEEVGKEFDVTRERIRQIEAKALRKLRHPS RSRKLRDYLD >gi|224461045|gb|GG657759.1| GENE 2503 2632059 - 2632754 578 231 aa, chain + ## HITS:1 COG:CAC1302 KEGG:ns NR:ns ## COG: CAC1302 COG2384 # Protein_GI_number: 15894584 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Clostridium acetobutylicum # 1 222 1 222 229 126 37.0 3e-29 MELSKRLRAVAGLVTEGASVADIGTDHGYIPIYLAAHGTAGKVIASDINEGPLERARIHI QGQKDVCGKIETRRSDGLKAIKPGEADTMIAAGMGGGLIIRILEEGKDVTEQMKDLILQP QSEAGKVRSYLNGHGFVIVEEDMVEEEGKYYPMMRAEHGTAGTYTETELCYGKLLLEQRH PVLREYLLREQRIKRDIEVQLGESESERSAKRRKELEKERKLIQNALEYYR >gi|224461045|gb|GG657759.1| GENE 2504 2632768 - 2633547 927 259 aa, chain + ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 241 1 242 258 159 35.0 4e-39 MRCKEIIDLIEKKYSPEYALEWDNVGLLAGRDDKEVRRIYVALDATDEVVDAAAEQGADM LITHHPLIFGAVKRVTNEDFIGRRMIKMLQNDISYYAMHTNYDVLGMAELSGKMLDLHDA EVLEVTRDDGHPEGIGRVADLKEAIPLRECAGYVKDCFHLGPVKVFGKLEQKVKRIAISP GAGKSMTGAALRKKADVLITGDIDHHTGIDAVADGLCIIDAGHYGVEHIFIGDMKRYLEE NTEHIDITAAPIQHPFEII >gi|224461045|gb|GG657759.1| GENE 2505 2633617 - 2635284 704 555 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M] # 43 553 36 544 546 275 32 6e-72 MDKEMYSVQIGEEIKRYERGTTYERIAQEYQKDYPYDIVLVFVNGRLQELYKTLNSDAVI SFVTTADNIGHKTYKRSMSLMLVKAVYDVANHEAIDKVRIHYAVSKGYYCTIEGDIELNE EFLDKVEARMYEMVEMNMPIQKRSIHTDDAVALFRQHGMRDKERLFEYRRVSKVNIYSMN EFEDYYYGYMVPSAGYLKYFKLYLYDEGFVIQMPVEEAPDIVPPFEPQNKLFQVLKESTK WGDIQGIETVGALNDKITKSDVREVVLVQEAMQEKKIAEIASEIAGRPEIKFVLIAGPSS SGKTTFSHRLSIQLRANGLVPHPIAVDNYFVERENNPKDADGNYDFECLEAVDVELFNRQ LRQLTEGKEVIIPNFNFVTGHKEYTNKPKKLGANDVLVIEGIHCLNPKLTEQLADENKYK IYISGLTQLNIDEHNRIPTTDGRLIRRIVRDARTRGSSARRTISMWPSVRRGEEQNIFPF QEEADVMFNSALIYELAVLKPYVEALLFGIEKDCVEYIEAKRLLKFLDYFVGIGSEYVPT NSLLREFIGGGCFNL >gi|224461045|gb|GG657759.1| GENE 2506 2635315 - 2636190 692 291 aa, chain - ## HITS:1 COG:BH2847 KEGG:ns NR:ns ## COG: BH2847 COG0564 # Protein_GI_number: 15615410 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Bacillus halodurans # 2 290 4 293 302 192 38.0 5e-49 MKRILDYCIPKEYDGTDILGFLKSRGYSHTVITHLKHTPDGICRGGAWARTCDKLRCGDR LTVTIEEKEGSAGIAPVSLPLHIIYEDEDLLVIDKPAGMPTQPSQGNHDNTLANALVCYY SRRGIPFTYRCINRLDKNTSGLLIVAKHMLSASILYAMIKERRIHREYLALAEGLTPSEG TITAPIARRSRSTIERCVDETNGEYACTHYRRLDYRKGYSLLSVTLDTGRTHQIRVHLKH IGHPLPGDFLYHPDYTIISRQALHSCRLTFPHPVTGRLMDFESPLPDDMRL >gi|224461045|gb|GG657759.1| GENE 2507 2636204 - 2638087 1880 627 aa, chain - ## HITS:1 COG:CAC0837 KEGG:ns NR:ns ## COG: CAC0837 COG0687 # Protein_GI_number: 15894124 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Clostridium acetobutylicum # 303 627 29 353 354 307 45.0 3e-83 MMKSVLQRVYLTLILILLYAPIVTLMILSFNASKSRSKWGGFTTKWYVELFRNEQIMNAL YTTLIIALLSALIATVIGTAAAIGIQALRSKFRTFMMGVTNIPMLNADIVTGISLMLLFI AFRFSLGFSTILFAHITFNIPYVILSVTPKLKQTNKSTYEAALDLGASPVHAFFKVVFPD ILPGVSSGFLLAFTMSLDDFIITHFTKGPGVDTLSTKIYSEVRKGIKPEMYALSTIMFVT VLLLLVLVNIAPEEKQVRGRIPEKPRRRHKISRFLFRKVVPVMMAAVVIVGGVFYGSRAD TGGADQVIVYNWGEYLDPDAITIFEEETGIDVVYEEYETNEIMYPKIQSGAIAYDVVCPS DYMIQRMLENDLLAEINFDNVPNIKEIGDTYMDMSRQFDPENKYSVPYTWGTVGILYNKK MVDEPIDSWSVLWDETYKDSILMQDSVRDAFGITLKYLGYSLNSTDLDELEAAKKLLIEQ KPLVQAYVIDQVRDKMIGNEAAIGVIYSGEAIYTQWENPDLEYVIPKEGSNVWIDSWVIP KNAKHKENAEKFINFLCRPDIAKMNFDYITYSTPNVGGRALIEDEALRDNPIAFPPEKDL ERCETFRFLGDENDAIYNELWREVKSK >gi|224461045|gb|GG657759.1| GENE 2508 2638084 - 2638893 1082 269 aa, chain - ## HITS:1 COG:CAC0839 KEGG:ns NR:ns ## COG: CAC0839 COG1176 # Protein_GI_number: 15894126 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Clostridium acetobutylicum # 8 265 12 269 277 231 48.0 1e-60 MKQLLAGPYMFWCAAFIIIPLLMILYYGLTDKNGGFTLLNIARITTPENLKALGLALLLS FISTVFCLILAYPLSMILTNLGVNQQSFIVLIFILPMWMNFLLRTLAWQNLLEKNGIINV VLEFLHLPSLDIINTPYAIVLGMVYNFLPFMVLPIYNVLSKIDKDIIAAARDLGANNVQT FLRIILPLSVPGIISGVTMVFVPALTTFVISDLLGGSKILLIGNVIEQEFKQGSNWHVGS GLSLVLMVFIIISMALIAKYDKDGEGTAF >gi|224461045|gb|GG657759.1| GENE 2509 2638904 - 2639977 1411 357 aa, chain - ## HITS:1 COG:CAC0840 KEGG:ns NR:ns ## COG: CAC0840 COG3842 # Protein_GI_number: 15894127 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Clostridium acetobutylicum # 5 352 6 352 352 411 59.0 1e-115 MSNKLIDIVNVSKSFGDNLVLDDLNLYIRENEFLTLLGPSGCGKTTLLRIIGGFESPDTG KVIFDGKNITDLAPNKRQLNTVFQKYALFTNMTIAENIAFGLKIKGKTRSYINDKIRYAL KLVNLEGFEDRTPDSLSGGQQQRIAIARAIVNEPKVLLLDEPLGALDLKLRQDMQYELIR LKNELGITFVYVTHDQEEALTMSDTIVVMNQGYIQQIGTPEDIYNEPKNAFVADFIGESN ILPATMVQDKLVKILGANFPCVDIGFGKNKPVDAVIRPEDIDLVKPEDGIIEGVVTHLIF KGVHYEMEVTANNFEWLVHSTDMVPVGTEVGIQVDPFDIQIMKKPESEDAEAVTIEE >gi|224461045|gb|GG657759.1| GENE 2510 2640000 - 2640584 738 194 aa, chain - ## HITS:1 COG:CAC0841 KEGG:ns NR:ns ## COG: CAC0841 COG1396 # Protein_GI_number: 15894128 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 16 194 1 179 179 207 58.0 1e-53 MFIFTFTIIVSRRTVMDIGKKLKELRIAKDLTQEELADRAELSKGFISQLERDLTSPSIA TLVDLLQVLGTTINEFFSEDPEEQIVFHDEDYFEKIDTDLKNKTEWIIPNAQKNMMEPIR LTLEPGGSTYLDVPHEGEEFGYVLKGSIKIHVGKKVYGAKKGEAFYFTPHSEHYIEGSRT TGAVIIWVSTPPSF >gi|224461045|gb|GG657759.1| GENE 2511 2640711 - 2640860 80 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570466|ref|ZP_03779491.1| ## NR: gi|225570466|ref|ZP_03779491.1| hypothetical protein CLOHYLEM_06567 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06567 [Clostridium hylemonae DSM 15053] # 1 49 35 83 83 96 100.0 6e-19 MVWMRAGVEGRSGRREAVTAERTGKQTTEPIRNEILKGFPPSEALGNVI >gi|224461045|gb|GG657759.1| GENE 2512 2640834 - 2640992 74 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570467|ref|ZP_03779492.1| ## NR: gi|225570467|ref|ZP_03779492.1| hypothetical protein CLOHYLEM_06568 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06568 [Clostridium hylemonae DSM 15053] # 9 52 1 44 44 69 100.0 7e-11 MGMFGCLAMNRQMVWMRAGVGGRSEAGVEDVAAGRAGNRHGNVISNNIPESL >gi|224461045|gb|GG657759.1| GENE 2513 2641478 - 2642584 968 368 aa, chain - ## HITS:1 COG:MA0550 KEGG:ns NR:ns ## COG: MA0550 COG0082 # Protein_GI_number: 20089439 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Methanosarcina acetivorans str.C2A # 1 350 1 353 365 361 53.0 1e-99 MAGSTYGTLFKITTWGESHGPAVGVVIDGCPAGLPLTNTDIQEFLDRRRPGQSRYTTARQ ESDEAEILSGVFEGKTTGTPVSILIRNQDQRSRDYGKIKDCYRPGHADYTFDCKYGFRDH RGGGRSSGRETIGRVAAGAVASRLLAGLGIQVTAYTSAIGTITVPRSEYNYECIRENALY MPNNDYAFKASAYLEQCIKNLDSSGGVIECAVTGMPAGIGEPVFDKLDAGLAKAVMSVGA VKGVEIGDGFRAAAANGSTNNDAFRSSDGHITKKTNHSGGVLGGMSDGSTILLRAAIKPT PSIAQPQKTVDCTGANTEITITGRHDPVIVPRAVVVIESMVAVTLADLLMTNMSAKMESL EKFYLGEL >gi|224461045|gb|GG657759.1| GENE 2514 2642745 - 2644628 1761 627 aa, chain + ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 153 627 2 466 466 358 40.0 2e-98 MSDMQKRPEDIDRESEEIIEETMKEIFDDINNSDEFKEMDDSYEESEEAADESGQEDKAE EENGRPLSEDTDAGGLSSDDSDIETAGVEEEPDSEDEAAEEEASEDGDESDEDDFEPDED DVESNEDDFEPDEDDVESNEDDFESDEDDGEEEETEAEKELRRHRRRKKAGIIAASVAGA LILIYIGFAVFFSSHFMFFTEINGQDFSMKSVSQVEEYMKKQVADYVLTLKESDGGTETI RGADISLEYVQGKELKQLVKKQNNFLWIESLWKHPEITAEVGVKYDENALKSITENLKCL NPDNQTASVDAHPEFKDTEFVIVPEVIGTQIDTEKFNEAVSTAINGFVSSVDLADAGCYI KPRFVSDSKEVTAAKDAMNSYLGASVTYDFSPNTEVVDASVISQWVKVDADMNVTFDEEA VKAYIQTLADKYNTKGKTRTFTTAGGNSVTVEGGSYGWRIDQEAEYNALTANIKNGETVT REPEYSSRAASHDVNDFGNTYAEVDLTNQQMYFIQNGQVVLQTGIVTGNPNKGNGTPQGT YSLAYKALDQVLRGKKKPDGTYEYESPVKFWMPFNGGIGFHDATWQPTFGGSRYQTNGSH GCVNMPYDKAAQLYDLISAGTPVILHY >gi|224461045|gb|GG657759.1| GENE 2515 2644656 - 2645789 1112 377 aa, chain + ## HITS:1 COG:CAC2282 KEGG:ns NR:ns ## COG: CAC2282 COG0343 # Protein_GI_number: 15895550 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Clostridium acetobutylicum # 1 375 1 375 376 618 75.0 1e-177 MYEVLKRDGLAKRGRLQTVHGVIETPVFMNVGTAAAIKGAVSTEDLQEIKTQVELSNTYH LHVRPGDVVVKELGGLHKFMVWDKPILTDSGGFQVFSLAGLRRIKEEGVYFQSHIDGRKI FMGPEESMQIQSNLASTIAMAFDECPSSVADRNYIEKSVERTTRWLARCKKEMERLNSLP GTINPRQLLFGINQGGICEDIRIRHAKEIAAMDLDGYAVGGLAVGESHEDMYRILDAVVP HLPVDKPSYLMGVGTPANILEAVDRGIDFFDCVYPSRNGRHGHVYTNGGKLNLFNARYEL DAGPIEEGCGCPACRTYSRAYIRHLLKAKEMLGMRLCVLHNLYFYNTMMEEIREAIEKGS YKEYKTKKLAKMAGQEV >gi|224461045|gb|GG657759.1| GENE 2516 2645882 - 2646184 360 100 aa, chain + ## HITS:1 COG:RC0893 KEGG:ns NR:ns ## COG: RC0893 COG1862 # Protein_GI_number: 15892816 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Rickettsia conorii # 20 100 42 122 141 62 33.0 3e-10 MYALAAQSGSNWILLILVYVLIFGGFWFIFMRPQKKEQKRLQAMIADMAVGDTVLTTSGF YGVIIDITDDDVIVEFGSNKNCRIPMQKAAIAQVEKASAE >gi|224461045|gb|GG657759.1| GENE 2517 2646340 - 2648676 2711 778 aa, chain + ## HITS:1 COG:SP2106 KEGG:ns NR:ns ## COG: SP2106 COG0058 # Protein_GI_number: 15901921 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 30 777 4 751 752 976 64.0 0 MFVNCECSSCMEISMSDDLMKETVMELNGLETLVKTKYGREIKELSDAEIYYALLAFTKE KLKNTPDNKGGKKLYYISAEFLIGKLLSNNLINLGIYEEVSELLAKNGKELARIEEVEPE PSLGNGGLGRLAACFLDSAATLGLEGDGIGLNYHLGLFRQVFEGHKQKELPNPWIGEENW LTDTGIRFQVPFGDFTLTSRLYDMDVCGYESGKNRLHLFDVEGVDESIVGEGISFDKNDI RKNLTLFLYPDDSDRAGNLLRIYQQYFMVSNGAQLILKECEENGYELRRLHEHVAVQIND THPSMVIPELIRLLVERNIDFNEAVEIVQKTCAYTNHTILAEALETWPLAYLEQVAPQIV PIIKELDLRVKGKYHDERVHIIDSQERVHMAHMDIHYGHSVNGVAALHTEILKNTELKPF YDIYPDRFNNKTNGITFRRWLLHCNKELVRWISGYVEEDFRRDANKLEKLLRHIESDIAL EKLLDVKHEKKVQLAQYLKETQGIELNPDSIFDIQVKRLHEYKRQQMNALFVIYKYLEIK AGKIPSTPITVIFGAKAAPAYKIAKDIIHLILCLQELVDNDPDVSPHLQVVMVENYNVTM AEHLIPACDISEQISLASKEASGTGNMKFMLNGAVTIGTEDGANVEIHELVGDDNIYIFG QSSRQVIEHYAKGDYRAADYYINDEQIRSLINFIISPEMMKIGDPYHLLQIHAELIYKDW FMTLLDLKEYIAVKNRAYEDYADRKAWSKKMLTNIAKAGYFSSDRTIAEYNKDIWHLQ >gi|224461045|gb|GG657759.1| GENE 2518 2648729 - 2649403 313 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 13 224 16 234 236 125 33 1e-26 MSAAILLQLEYFLRVLGAAACGAVIGYERESHMKSAGIRTHAIVALASSLMMVLSKYGFY DILAREHIGLDPSRIAAGVVTAVGFLGAGVIFNRKMNVVGITTAAGIWATVGIGMAFGAG MYVLSIASSLFIVLLQFLFHTRFLYGRNAVMEQITIQVDSKEEIKELLGGIFSSSKIKIS NINARKVDDTTLEIKLHVKFPESYDIYEIFTLLKNNPQIKSIDI >gi|224461045|gb|GG657759.1| GENE 2519 2649535 - 2650323 751 262 aa, chain + ## HITS:1 COG:SPy1869 KEGG:ns NR:ns ## COG: SPy1869 COG2820 # Protein_GI_number: 15675688 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 1 259 1 259 259 351 68.0 8e-97 MINYSEDKDRQYHIQVAEGEVGRYVILPGDPKRCEKIAAHFDNARLIADSREYVTYTGEL DGEKVSVTSTGIGGPSAAIAMEELVGTGADTFIRVGTSGGMAEEVKSGDIVIATGAIRME GTSKEYAPIEYPAVADISVVNALMEAAGRLKLDYHTGVVQCKDSFYGQHSPDTKPVGYEL MEKWNAWVKCGCLASEMESAALYIVGSCLRVRVGSVMLVMANQERARKGLPNPVVHDTEA PIQAAVEAIRILIQKDRLQEGE >gi|224461045|gb|GG657759.1| GENE 2520 2650326 - 2651009 785 227 aa, chain + ## HITS:1 COG:SPy1867 KEGG:ns NR:ns ## COG: SPy1867 COG0274 # Protein_GI_number: 15675686 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Streptococcus pyogenes M1 GAS # 1 217 1 217 223 258 62.0 5e-69 MKIEEILRHVDHTLLAQTATWEDIRGICDDGMTYHTASVCIPPSYVKQAKDYAGENLAIC TVIGFPNGYNTTAAKAAETKDAVAAGADEIDMVVNLGWVKDKKYDSIEAEIRQIKEAAGT RVLKVIIETCLLTEEEKIKMCEIVTAAGADYIKTSTGFADGGATFDDVKLFAEHVGKGVK IKAAGGISSIRDAEEFLRLGADRLGTSRIVKIAKSKAGGLQQKECLN >gi|224461045|gb|GG657759.1| GENE 2521 2651006 - 2651434 465 142 aa, chain + ## HITS:1 COG:CAC1544 KEGG:ns NR:ns ## COG: CAC1544 COG0295 # Protein_GI_number: 15894822 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Clostridium acetobutylicum # 10 141 5 131 132 117 47.0 5e-27 MKKEKLPVREMIQKAMETLECSYAPYSNFKVAASLLTEDGVIYTGCNIENAAYSPGNCAE RTAFFKAVSEGVREFAAICIVNEDEKGGHGICPPCGMCRQVMMEFCRPEEFYIILAADEA QYEIHTLAELFPMGFGPGSLKG >gi|224461045|gb|GG657759.1| GENE 2522 2651461 - 2652651 1449 396 aa, chain + ## HITS:1 COG:lin2068 KEGG:ns NR:ns ## COG: lin2068 COG1015 # Protein_GI_number: 16801134 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Listeria innocua # 2 384 3 384 394 452 59.0 1e-127 MERFHRVFIIVLDSLGIGEMEDAARFGDEGADTLGHIAQAVPRLSLPNLAKLGLWNAHPS GKEQAEKHPEGYYGVLQERSNGKDTMTGHWEMMGIYTTKPFKTFTENGFPEELIKELEER TGRTIIGNKSASGTEILEELGEEEIATGHMIVYTSADSVLQICGNEETFGLDELYRCCEI ARELTMKDEWKVGRVIARPYVGKKKGEFVRTSNRHDYAVKPPGPTVLDALKKAGYDVISI GKIKDIFAGEGITKAWKSKSSVHGMEQTTEAADQEFHGLCFVNLVDFDALWGHRRDPEGY AAELERFDNKLGELLDVLQEDDLLMITADHGNDPTYKGTDHTREKVPLLVYSGSDKGAGS LGEQDTFAVIGATVAENFGVEMPEGTIGHSLLHLIR >gi|224461045|gb|GG657759.1| GENE 2523 2652747 - 2653835 1300 362 aa, chain + ## HITS:1 COG:PA3118 KEGG:ns NR:ns ## COG: PA3118 COG0473 # Protein_GI_number: 15598314 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Pseudomonas aeruginosa # 1 361 1 358 360 401 58.0 1e-111 MNLNIGVIKGDGIGPEIVTEAMKVLDRVAEVYGHSCKYTQLLLGGASIDVHGVPLTDETV AAAKACDAVLMGSIGGDAATSPWYRLEPSRRPEAGLLKIRKELNLFANLRPAVLYDELKG ACPLKEEITEGGFDMVIMRELTGGLYFGERRTAEENGVLTAYDSLTYNENEIRRIAKRAF DIAEKRRKKVTSVDKANVLDTSRLWRKVVEETAADYPDVTLEHMLVDNCAMQLVKDPKQF DVILTENMFGDILSDEASMVTGSIGMLASASLNETKFGLYEPSGGSAPDIAGRGIANPIA TILSMAMMLRFSFDLDREADAVEQAVADVLKEGYRTIDIMSEGKKQTGTSEMGDLIAGYI RR >gi|224461045|gb|GG657759.1| GENE 2524 2653839 - 2655512 2088 557 aa, chain + ## HITS:1 COG:CAC3170 KEGG:ns NR:ns ## COG: CAC3170 COG0129 # Protein_GI_number: 15896418 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Clostridium acetobutylicum # 1 555 1 551 552 651 60.0 0 MRSDTVTKGMQQAPHRSLFNALGYTKEELERPLVGIVSSHNEIVPGHMNLDKIVEAVKMG VAMAGGTPIVFPAIAVCDGIAMGHIGMKYSLVTRDLIADSTEAMALAHQFDALVMVPNCD KNVPGLLMAAARINVPTIFVSGGPMLAGRVQGKKRSLSSMFEAVGAYTAGTMTEEDVCEF ENKVCPTCGSCSGMYTANSMNCLTEVLGMGLSGNGTIPAVYSERIRLAKHAGMQVMELWK QDIRPRDIITEEAVLNALTVDMALGCSTNSMLHLPAIAHEIGMDFEIDFANGISEKTPNL CHLAPAGPTYMEDLNEAGGVYAVMAELNKKGLLHTECLTVTGKSVGENIAGAVNRDPEVI RTIDDPYSTTGGIAVLKGNLAPDGSVVKRSAVAEEMLVHEGPARVFDCEEDAIAAIKGGE IVAGDVVVIRYVGPKGGPGMPEMLNPTSAIAGMGLGSTVALITDGRFSGASRGASIGHVS PEAAVGGPIALIEEGDIIKIDIPGLKLELDVTEEELEKRREAWEPRQPRVTTGYLARYAS MVTSGNRGAILEVPKNK >gi|224461045|gb|GG657759.1| GENE 2525 2655530 - 2657212 1992 560 aa, chain + ## HITS:1 COG:CAC3169 KEGG:ns NR:ns ## COG: CAC3169 COG0028 # Protein_GI_number: 15896417 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Clostridium acetobutylicum # 1 546 1 547 554 620 56.0 1e-177 MQLTGAEIVIECLKEQGVDTVFGYPGGSILNVYDELYKHSDEITHILTSHEQGAAHAADG YARATGKVGVCFATSGPGATNLVTGIATACMDSIPLVAITCNVGVSLLGKDSFQEIDITG ITMPITKHNFIVKDVKNLAETIRKAFVIAQKGRPGPVLVDIPKDVTANKAEYKKQEIAPV TASKDICEAEIESALKIISKSRKPYIFVGGGAVLADASEELYEFVKKVDAPVTDSLMGKG AFPGTDPLYTGMLGMHGTKTSNYGVSECDLLIVIGARFSDRVTGNAKKFAKNARILQFDV DAAEMNKNVLITDGVVGDIKVALGMINRRLEEQSHPEWIEKIMAYKEQYPLKYHEEGLTG PFVVEEIYRQTEGDAVIVTEVGQHQMWAAQFYKFTKPRTFLTSGGLGTMGYGLGASLGAK VGMPDKTVVNIAGDGCFRMNMNEIATAARYNIPIIQVVVNNHVLGMVRQWQNLFYGKRYS ATVLNDSVDFVKLAEALGATGVRAATKEEFKSAFASALTLGRPVVIDCQIDSDEKVWPMV APGAAISEAFDEKDLEERSN >gi|224461045|gb|GG657759.1| GENE 2526 2657246 - 2658328 949 360 aa, chain + ## HITS:1 COG:lin2957 KEGG:ns NR:ns ## COG: lin2957 COG1932 # Protein_GI_number: 16802016 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Listeria innocua # 1 355 1 352 363 401 57.0 1e-111 MSRVYNFSAGPAVLPEEVLTEAAAEMLDYNGTGMSVMEMSHRSKAFQEIIDSAESDLREL MNIPDNYKVLFLQGGASQQFAMIPMNLMKNRVADYIVTGQWSKKAYAEAAKYGKANKIAT SEDRTFSYIPDCSDLPVSEDADYVYICENNTIYGTKFRHLPDTKGKPLVADVSSCFLSEP VDVTKYGVIYGGVQKNVGPAGVVIVIIREDLITDDVLPGTPTMLQYKTHVDAGSLYNTPP AYGIYICGKVFRWLKRQGGLAAMKERNEKKAKILYDYLDASQMFKGTVEAKDRSLMNVPF VTGSDELDARFVQEAKAAGFESLKGHRSVGGMRASIYNAMPEEGVKALVAFMKTFEEENL >gi|224461045|gb|GG657759.1| GENE 2527 2658331 - 2659494 1386 387 aa, chain + ## HITS:1 COG:lin2956 KEGG:ns NR:ns ## COG: lin2956 COG0111 # Protein_GI_number: 16802015 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Listeria innocua # 1 387 1 389 395 397 51.0 1e-110 MYKYHCLNPISDVGLEQFTEDYIPVSDAKTADAVLVRSTAMHEMEFGTELKAIGRAGAGV NNIPLERCSENGIVVFNTPGANANGVKELVIAGMLLASRDIIGGINWVQENEEDGNIAKD AEKAKKAFAGCELDGKKLGVIGLGAIGVLVANAATHLGMDVYGYDPYVSVDSAWRLSRSI RHAKTVDEIYKDCDYITIHVPALESTKGMIDADALNLMKKGIVVLNFARDVLVDEEAMID ALLSGHVKHYVTDFPTPAMAGVKGAIVIPHLGASTEESEDNCAKMAVKEIRNYLEHGNIT NAVNFPDCDMGYKGSNTRIVLLHHNIPNMLGQFTKVLAEDNLNIADLANKSKGEFAYTMI DIDSEVPAGVTEELMKIEGVRRVRIIE >gi|224461045|gb|GG657759.1| GENE 2528 2659561 - 2660994 1414 477 aa, chain + ## HITS:1 COG:BS_yjeA_2 KEGG:ns NR:ns ## COG: BS_yjeA_2 COG0726 # Protein_GI_number: 16078275 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 273 464 19 211 217 184 44.0 4e-46 MKKRRIHKRRRNNRGRAGTFFRVLALLVVCLMPFLLFRTAAAAQREEQIIIKAVSGEILQ GEELSEPAVQIYADGSEKAVLDKKSGYTAGDLLNDLKSGKDYTLKCEADASLEGDYPVEI VLDGDMSSALKNAWIGLVSIKTEDGLIRVKNPVGEWEGSKFRRYDGSYVLSDFVVSKGNT YYFDGDGNKVSGLTNIEGAVYYFDRDGIMQTGWQEIEESRYYFTDKGAAAVGWQELDGAT YYFDKEAKMATGETYLGLTLCLFDKDGKLLSKKESSIDPNRPMVALTFDDGPGPRTKELL DALQKYNGHATFFMLGQKVPSYAEVVKRMKELGCELGNHSYDHADLSKMDAAGVQSEVDK TNENISQAAGQGASVMRPPYGAISSTMKTTIGMPMMLWNIDTLDWKTRDAQKTIDAVMGS VKDGDIILMHDIHTESVDAALELIPRLMDEGYQLVTVSELAAAKGNELQNGGVYTDF >gi|224461045|gb|GG657759.1| GENE 2529 2661300 - 2662475 1172 391 aa, chain - ## HITS:1 COG:CAC0819 KEGG:ns NR:ns ## COG: CAC0819 COG0462 # Protein_GI_number: 15894106 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Clostridium acetobutylicum # 16 384 13 366 371 398 52.0 1e-111 MPNIKLMEEALPVAPLKIAALESCRELGQKVNDYIVRFRQQTLRESLDSPLFSSYQLENY LIECKCPRFGTGEAKGIIGESIRGKDLFIMVDVCNYSLTYTVNGHLNHMSPDDHYQDLKR IISAATGKAHRINVIMPFLYESRQHKRTKRESLDCALALEELMEMGVSDIITFDAHDPRV QNAIPLQGFDNFNPPYQFMKALLRAEPDLSVDKEHLMVVSPDEGAMHRAVYFSNVLGVNM GMFYKRRDYSTVVGGKNPIVAHEFLGDDIKGKNVIIVDDMISSGESMLDVAKQLKERGAG RVFVCTTFGLFTEGFDKFDDYYESGYIDRVITTNLTYLPPAAYEKPYFVVADLSKFIALI IDSLNHDITIGSVLNPTDKIHALLERHNAGK >gi|224461045|gb|GG657759.1| GENE 2530 2662671 - 2663978 1396 435 aa, chain + ## HITS:1 COG:CAC1710 KEGG:ns NR:ns ## COG: CAC1710 COG1625 # Protein_GI_number: 15894987 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase, related to NifB/MoaA family # Organism: Clostridium acetobutylicum # 4 433 2 430 437 410 47.0 1e-114 MRHEHIIKEIVPGSIAEEMGIEPGDRLLSVNDKIIEDVFDYHFCVNEEELVVLIEKQNGE EWELEIEKDYEEDLGIEFEQGLMDEYRSCRNKCMFCFIDQMPGGMRDTLYFKDDDSRLSF LQGNYITLTNMSDHDIERIVTYHLEPINISFHTTNPELRCKMLHNRFAGDALRKVDRLYE GGITMNGQIVLCKGINDGEELERSIRDMSRYLPYLQSVSVVPVGLTKYRDGLEPLEPFTR EDAGEVLDIIHKWQDRLYEEHGLHFIHAGDEWYILAGQEMPEEERYDGYLQLENGVGMLR LLENEFEEAYARLDGDKKIREVSVATGLLAEPYIRKMAERLKEKYPNTAVHVYPIRNEFF GELITVSGLITGQDLVSQLKGRELGERLLLPCNMFRSEESVFLDDVTLDELKETLQVQAD IVKSSGQDFIEAIIR >gi|224461045|gb|GG657759.1| GENE 2531 2664012 - 2665340 1633 442 aa, chain + ## HITS:1 COG:CAC1711 KEGG:ns NR:ns ## COG: CAC1711 COG1160 # Protein_GI_number: 15894988 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 1 438 1 437 438 507 58.0 1e-143 MSKPVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYAEVSWLDKEFTLIDTGG IEPESKDVILSQMREQAQIAIDTADVIVFITDVRQGLVDSDSKVADMLRRSGKPVVLVVN KVDSFDKFMPDVYEFYNLGIGDPVPVSAASRLGIGDMLERVAQFFPEHSSEEEDDERPRI AIVGKPNVGKSSIVNKLLGEQRVIVSDVAGTTRDAIDTEIIHGGREYVFIDTAGLRRKSK IKEELERYSIIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIAHERGKGIIIVVNKWDA IEKNDKTMREYEHRVRQVLSFMPYAEIMYVSAETGQRLNKLYDMIDMVIENQTLRVATGV LNEIMTEAVAMQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRYLENKIR EAFGFKGTSLKFFIRERKEKDR >gi|224461045|gb|GG657759.1| GENE 2532 2665343 - 2665984 822 213 aa, chain + ## HITS:1 COG:BH1639 KEGG:ns NR:ns ## COG: BH1639 COG0344 # Protein_GI_number: 15614202 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 5 213 6 204 206 101 40.0 1e-21 MERLICVMIGYAFGLLQTGYIYGKLHHVDIRKQGSGNAGTTNALRTLGWKAGAVTFLGDC FKCVFAVIVVHLIFGGTHGDIMPVLSMYAGMGAVLGHNYPFYLGFKGGKGIAATAGLIVS TVNAWMVLICLVVFVGLVAGTRYVSLGSLAVVIVYLAEVVVYGQTGGFGVSGSSLWEMYG IALFLMLSAFFKHRANIKRLLNGTENKLGSGKK >gi|224461045|gb|GG657759.1| GENE 2533 2665997 - 2667010 1264 337 aa, chain + ## HITS:1 COG:FN0906 KEGG:ns NR:ns ## COG: FN0906 COG0240 # Protein_GI_number: 19704241 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 329 1 331 335 391 58.0 1e-109 MAKAGIMGAGSWGTALALLLHKNGHDVAVWSINEEEVKMLSTKREHESKLPGVKIPDDME FTTDMESVIRGKDFLVLAVPSPFTRSTARSMKPFVAQGQMIVDVAKGIEETTLMTLSQQI EEEIPQADVAVLSGPSHAEEVGRGLPTSVVIGARTKETAEYLQGMFMSEVFRVYTSPDML GMELGGSLKNVIALAAGIADGLGYGDNTKAALITRGIAEIARLGVKMGGAIESFTGLTGI GDLIVTCASQHSRNRRAGYLIGQGMSMQEAMDEVKMVVEGVYSTKAAVKLGEKYGVALPI IDEVNKVLFENKDPRTAVNELMLRDSKAEHTALPWKE >gi|224461045|gb|GG657759.1| GENE 2534 2667629 - 2667790 105 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570494|ref|ZP_03779519.1| ## NR: gi|225570494|ref|ZP_03779519.1| hypothetical protein CLOHYLEM_06595 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06595 [Clostridium hylemonae DSM 15053] # 1 53 1 53 53 70 100.0 3e-11 MAVYGLGKAAGGGGAVSTLAVRKGRRHGSNRHRQNSTGNLDDFLCQLSHKLHL >gi|224461045|gb|GG657759.1| GENE 2535 2667821 - 2668708 1039 295 aa, chain - ## HITS:1 COG:lin2335 KEGG:ns NR:ns ## COG: lin2335 COG0583 # Protein_GI_number: 16801398 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 292 1 290 292 349 58.0 4e-96 MNLYHLRYFVTLAHLEHYTKAAEILAITQPSLSHAIASLEKELGVKLFEKEGRNVVLTKC GQAFLTDVEQALGMLDSSINKLQMTGSGEGRIDVALLRTLSTSVVPQFVRGFLDTRPEKN IDFYFHTSTGLTPDIIQGVKERRYDVAFCSLMENEPAIEFTPVARQELVVIVPEDHPLSG RHEIDLKETLPYPQIVFSKRSGLRPIIDHLFEQCGGQPDIVYSLEEDQAVAGLVGAGFGI AVVPRMEILGYMPVHTIAIHEPAWERLFYMATLKNVYQAPAIIDFKRYVTEHAKL >gi|224461045|gb|GG657759.1| GENE 2536 2668907 - 2669746 969 279 aa, chain + ## HITS:1 COG:lin2336 KEGG:ns NR:ns ## COG: lin2336 COG1082 # Protein_GI_number: 16801399 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Listeria innocua # 3 276 9 281 284 291 54.0 7e-79 MSKKYPITISSWTLGDQCKFEDRVIAAKEAGYEGIGLRAETYVDALNEGLYDEDIMAVLE KHGMKVTEVEYIVQWAEDNRSYEQKYKEQMCFHMCDLFGVNHINCGLMENYSVEHTAQKL KELCHRAGKRIIGVEPMPYSGIPDLKKGWEVVKASGCDNAMLILDTWHWVRADQPYDILT EEIAKKVVSIQINDAYDRPYAKTILRDESMHDRLAPGTGAKDTAGFVKMIKDAKIEPAVV GVEVISDEILARGIKEAAAHTYDNTVKVLRETWPEVVED >gi|224461045|gb|GG657759.1| GENE 2537 2669782 - 2671707 2145 641 aa, chain + ## HITS:1 COG:lin2337_1 KEGG:ns NR:ns ## COG: lin2337_1 COG1902 # Protein_GI_number: 16801400 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 1 361 1 361 361 524 68.0 1e-148 MKFDNMFSPIQIGPMTVKNRFVVPPMGNNFANTDGTWSEQSAAYYAERAKGQFGLITIEA TVVHEGAKGGPRKPCLYNDNSIESLKKIVDACHAEGAKVSVQLQNAGPEGNAKNAGAPIQ AATAIPSTFGRDTPEEVPAAQVYELVKGYGEAARRAMQAGADAVEIHMAHGYLVNSFISQ RTNKRVDEFGGSFENRMRFPRLIIEEVKKNVGDKVAILARINSADEVPGGVDVHDSAAIA AYLEECGVQCLHVSRAVHIKDEYMWAPTTIHAGFSAELVTEIKKAVSIPVITVGRYTEPQ FAELLVKEGRTDLVAFGRQSLADPHMPEKAMQERLEDMIPCIACLQGCVANMYKGEPICC LTNPFLGHEAEGYPKAEQAKKVMVIGGGVAGLCAAFICAERGHEVTLYESTGKLGGNMRL AAYPPGKGDITGMIRSYIVRCEKAGVKVKMNTAADMDTVKEEKPDAVIVATGSKTLILPI EGIDDPAIIHGSDLLEGRRQAGEKVLVVGGGMVGCEIAAFLGEQQHKVSIIEFRDSMGAD MITEHRKYVMKDFEEYKIEQIVNAKVCKFYEDGVEYESPDGVRHEVRGFDSVILSMGFRN YNPFAEQLEELGQEVYVVGDATRARRALDATKEAYAAAMQI >gi|224461045|gb|GG657759.1| GENE 2538 2671731 - 2672603 1125 290 aa, chain + ## HITS:1 COG:lin2338 KEGG:ns NR:ns ## COG: lin2338 COG0169 # Protein_GI_number: 16801401 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Listeria innocua # 1 283 1 284 289 325 55.0 7e-89 MEKRISGHTGLMALFGTPVGHSGSPAMYNFSFQHDGLDYAYMAFDVNVEQMPKVFEAIRL LNMRGGNFTMPCKNVAAKLVDKLSPAAEIIGACNVFVNDDGVITGHVTDGVGFVKNLELN GVDVKGKKTVILGAGGAATAIQVQLALDGAKEVKIFNPKDDFFARAEGTKAKLADRCPQC VVTVEDLDDKEKLAEAVNNCDIVINATIMGMKPYDDVSLIDKSLYRKDLIVADTVYSPEK TKMILEAEEAGCKAVGGKGMLEQQGAVNYELFVGRKMPLEEYQKFQKENK >gi|224461045|gb|GG657759.1| GENE 2539 2672642 - 2673925 1390 427 aa, chain + ## HITS:1 COG:STM1361 KEGG:ns NR:ns ## COG: STM1361 COG0477 # Protein_GI_number: 16764712 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 5 380 4 360 403 132 28.0 1e-30 MKAKKYILSLVTVYMCYFTHGIQAIILSQNKVNFFTQWGYTDEVAGAAAVSLAITATGFG KFLTVWLGGEVSDKIGRKKMAVAGGILYIICFAGLLFSTNFTVACVCAFLAGVATSGFWD ASLYPAVQEAAPKYAGSALIGIKAFVSVSGIIYPLMAVHFSAAGNWKINVWIPLILSVVC VILAVIAPFVYDDQMKETVKTADGKTTNAAQAEIDAAKARMKTKPGGLVNFVTMFYGFIC MFIMYGAQQYTKAFGMTNCGLSEMQAAGMTSIYTAGSIIAVVFWAIMMGKLKWNPLKVVL IDSAFTAAALAIVLLVKNVGVVYVAIALLGFFAAGGALQTGLGVRQEMCPGPKGRNTGIY YTWMGLASCFLPYIVSAMTKSIGETSAIYTMMALLLVASVIAVVMMAYLVAQYKKIFGNN PLGRQEA >gi|224461045|gb|GG657759.1| GENE 2540 2674039 - 2675475 1696 478 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1888 NR:ns ## KEGG: CDR20291_1888 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 10 447 7 444 463 355 40.0 2e-96 MSARRVKNPKELPYIPLGPFQWRIPGLHYRIEQVEFFQGLVLGATALSSIPYLTDYLGIP YELAWSCVIIEVFMYMLHGWLGDPVVPGWITPTLPFTLAFITGFEKGPERIQAMIAVQLL VAFVFIFMGVTKLADRFVRSVPTSIKGGILLAAPITVIQGQLEKGSQLLTAPVATLAGTL LLAFLSFSPFCEKKRGKIKLLDIMAKYGNLFPYLVAMLLGVLLGELAKPTLELGSIIRIP DFGNIFRTVSVFSVGFPPLSMFIQAMPLALICYVLAFGDFVTSETLVKEAQESRDDEYID FNSSRSNLISGLRNLILALFAPFPPLAGPLWVGVTVSVAVRYKEGKKAMKSLIGGMSSFR MATFLSVILVPVVSFMKPIMGVGSAITLLFQAYVCARIGMEYCKSNTDRSIAGIMAAVLA FKGSGWALLAGFALNFLLSNMEFQKKKLGVPTTAELEVIEKSKEEEIKALAAKKCIEN >gi|224461045|gb|GG657759.1| GENE 2541 2675537 - 2677009 1903 490 aa, chain + ## HITS:1 COG:no KEGG:Closa_2078 NR:ns ## KEGG: Closa_2078 # Name: not_defined # Def: stage IV sporulation protein A # Organism: C.saccharolyticum # Pathway: not_defined # 1 490 1 491 491 602 58.0 1e-171 MNTFQLYKDIQARTNGEIYIGVVGPVRTGKSTFIKRFMDVLVLPHMEDEHGKSRTKDELP QSASGRTIMTTEPKFVPKEAAEIRLSDDVSVKVRLIDCVGYMVEGASGHIEGGEERQVKT PWFDYEIPFTKAATIGTRKVIHDHATIGIVVTTDGSIGDIERQGYREAEDKTIRELQSIG KPFIVLVNSKKPYGDEARETAQELEQQYGVKAMPVNCEQLKEDDIYQIMEAVLFEFPVSE VQFFIPKWVEMLPRDHRIKQDMLEHIRAVMDGLGEIKDAAAGVEKPESPYINDMKVDHIE MDTGCVKVRIDIADKFYYEMLSELTGTPIAGQYELITAMKNLSELKDEYEGVKDAFAAVR MKGYGVVSPKKEEITLEEPVIIKQGNKFGVKIHSEAPSIHLIRANIETEIAPIVGSEQQA EDLVRYIKEAGDTEGGIWSTNIFGKSIEDLVMDGMQNKMAVINDESQVKLQDTMQKIVND SNGGLVCIII >gi|224461045|gb|GG657759.1| GENE 2542 2677180 - 2677566 600 128 aa, chain + ## HITS:1 COG:ECs3033 KEGG:ns NR:ns ## COG: ECs3033 COG1380 # Protein_GI_number: 15832287 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Escherichia coli O157:H7 # 6 113 12 119 132 56 34.0 1e-08 MNMKILRQLGIILALCLAAEFVVSLLPIAFPGSVTAILILAALLGLKILKEGHIKETADF MLSNMAIVFVPVSIGMVEDIGLLKGQLAGFLTVVCISLILTFLGTYASVRLVQVCMGRLS GKGGAAGA >gi|224461045|gb|GG657759.1| GENE 2543 2677559 - 2678236 748 225 aa, chain + ## HITS:1 COG:MA3262 KEGG:ns NR:ns ## COG: MA3262 COG1346 # Protein_GI_number: 20092078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Methanosarcina acetivorans str.C2A # 1 225 6 230 238 172 43.0 4e-43 MRELWANPLFGVFLTVTTFYIGDWTAKKIRSPLANPLLIAMVLCVAVLKLLHIPYEDYME GGQFISLFLVPATAMIGLSIYRQREVLRQQFFPIVIGCLVGSVISMGSTIVLCRVLALHQ EMLASLLPKSVTTAIALDLSDQLGGLRSVTMMAVIICGTGGAIVHPFIIRLLRLKDPVAT GVAFGTASHAIGTAKAIEMGEVEGAVSGVSMGIAGICTVIIALFL >gi|224461045|gb|GG657759.1| GENE 2544 2678292 - 2678759 571 155 aa, chain + ## HITS:1 COG:CAC2022 KEGG:ns NR:ns ## COG: CAC2022 COG0521 # Protein_GI_number: 15895292 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Clostridium acetobutylicum # 1 154 2 155 165 121 38.0 5e-28 MKVAIITASTEIYKGKKEDAGGPVVKKIMEDAGHSIVFMKALPSDRKVISTVMQRMADAH LTDLILTTGGAGCAPNDYTPEATMDVVDRPILGIPEAMRAFTMQVTKRSMLNRSAAGIRG DVLIVNLPGNAKAVKQCLDYLLPEITHAVEVIKGV >gi|224461045|gb|GG657759.1| GENE 2545 2678769 - 2679452 740 227 aa, chain + ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 3 210 2 221 237 129 35.0 3e-30 MKITYLNHSGFVLELEHDVLIFDYYRGELPALPKEKNIYVFSSHAHPDHFQKKIYDWDKM YGGITYILSDDIQTEGRNERIIHVGPRQELEAGGLHIKTFRSTDEGVAFLIRTEGKTIYH AGDLNWWHWEEEGPVYNEMMRRNYQHEIGRMEGEKIDVAFVPLDARQEEQFYWGMDYFMK HTDTKRVFPMHMWDKYEVYEWLMDKEEAADYRDRVMHITKDGQTFEI >gi|224461045|gb|GG657759.1| GENE 2546 2679465 - 2679938 574 157 aa, chain + ## HITS:1 COG:STM0263 KEGG:ns NR:ns ## COG: STM0263 COG0328 # Protein_GI_number: 16763646 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Salmonella typhimurium LT2 # 2 146 4 141 155 155 56.0 2e-38 MQVKIYTDGAARGNPDGPGGYGTVLEYVDSRGELHTKELSQGYKKTTNNRMELMAVIAGL EALNRPCEIELYSDSKYVVDAFNQRWIDGWIKKGWKRGKNEPVKNVDLWQRLLKAKEPHK VTFIWVKGHDGHVQNERCDTLATTAADGDGLITDEGV >gi|224461045|gb|GG657759.1| GENE 2547 2680414 - 2680917 448 167 aa, chain + ## HITS:1 COG:BS_ywhH KEGG:ns NR:ns ## COG: BS_ywhH COG2606 # Protein_GI_number: 16080800 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 17 160 10 156 157 74 35.0 1e-13 MDMAAQRVVRLLKKQTFTYEIRDCDRDFESTEDSIKLLSVPEEKIAKTLVFAAPIGASVI ILSGDAKIDPGKYEKQFKVKRIVLDEEDLMEYTGCRPGAVSPIALPGKRAKVYMDVSLQR FMDEYVYTSGGTGNSAVGITARDLYEVTGCRQWIDISSGWRRGEDEE >gi|224461045|gb|GG657759.1| GENE 2548 2680914 - 2681456 664 180 aa, chain + ## HITS:1 COG:CAC3334 KEGG:ns NR:ns ## COG: CAC3334 COG0655 # Protein_GI_number: 15896577 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Clostridium acetobutylicum # 4 167 3 165 178 124 38.0 8e-29 MKNIVVITGSPRKNGNSERMANAFIKGAGSKGHRLTTISAAELNIQGCRACDGCYKTGHP CVFADDFNHIAPALLEADVIVFATPLYWFTFPEQIKALIDRFYALMRGDIPFRGTKECML LVCGADEKAAFAGIVKTYEIMADYLKWKDRGHVIAEKTEEKGDVDKTGILDEIRRLGEEI >gi|224461045|gb|GG657759.1| GENE 2549 2681499 - 2681939 511 146 aa, chain - ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 6 143 2 138 146 131 52.0 5e-31 MVENTLNVGSISEGFVLDHIQAGRSMDIYKHLKLDKLDCCVAIIKNARSSKMGRKDIIKI ECPIDFIDLDILGFIDHNITINIIKDQKIVDKKALKLPKEITNVIRCKNPRCITSIEQEL DHIFVLTDPEKEVYRCKYCEEKYDER >gi|224461045|gb|GG657759.1| GENE 2550 2681952 - 2682869 794 305 aa, chain - ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 2 303 5 306 307 414 65.0 1e-115 MRHLMSPLDFSVEELDKLMDLANDIEADPEKYAHACEGKKLATLFYEPSTRTRLSHEAAM LNLGGNIMGFSTADSSSAAKGESVSDTIRTISCYADICAMRHPKEGAPMVACRHSSIPVI NAGDGGHQHPTQTLTDLLTIRSLKGHLSGMTIGLCGDLKFGRTVHSLIHALVRYTGIKFI LISPEELRLPSYIRNDVLDAKNVPYEEVVRLEEALPKLDILYMTRVQKERFFNEEDYVRM KDFYILDAKKMKLAPDDMFVLHPLPRVNEISVEVDDDPRAAYFKQMQYGVYVRMALILTL LEIEV >gi|224461045|gb|GG657759.1| GENE 2551 2682880 - 2683416 548 178 aa, chain - ## HITS:1 COG:MA0330 KEGG:ns NR:ns ## COG: MA0330 COG0778 # Protein_GI_number: 20089228 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Methanosarcina acetivorans str.C2A # 1 168 6 163 179 72 33.0 4e-13 MNTKECIVTRRSIRRFKPERVEHSLLESIISAASYSPSWKNSQITRYIAVEDPSVLDTIA THFTPEFNSRIVKQAPLLVAVTFVKGICGFERDGSFTTAKEDRWQMFDAGIACQTFCLAA HDAGLGTVIMGIWDEQGISMLLDIPQDEELAALIAVGRPAIEPAAPGRKSVKELLTYR >gi|224461045|gb|GG657759.1| GENE 2552 2683476 - 2683763 179 95 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0824 NR:ns ## KEGG: Cphy_0824 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 3 95 54 146 147 118 56.0 9e-26 MGNTSIWMFPIYGMASFLSPVCKVLKGKSPVLRGGVYTCCIFVGEYITGSVLRRIDACPW DYSKAPLNINGLVRLDYAPLWFGAGLLFEKILSRS >gi|224461045|gb|GG657759.1| GENE 2553 2683947 - 2685077 1375 376 aa, chain + ## HITS:1 COG:DR1147 KEGG:ns NR:ns ## COG: DR1147 COG0077 # Protein_GI_number: 15806167 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Deinococcus radiodurans # 112 376 23 285 293 182 37.0 8e-46 MAELLELREQLDEIDAQIVELYEKRMNICEQVGEYKIAKGKKVFDRQREKNKLADVAARV SSDFNKKGIQELYQQLMSMSRKLQYQQLVKAGALGRLPFIEVDSLEKSTARVVFQGVEGA YGQAAMQQYFGENCNSFHVRTFRDAMEAIEEGSADFAVLPIENSSAGAVNEMYDLLVEFE NYIVGETILPVTHTLAGLPGTKLSDIQRVYSKAEALMQTSRFLDVHADWQQISVVNTAIA AKKILEDADRTQAAVCSAYAAKVHGLSVLVEGINDEENNFTRFIVVTNQKIFRKDADKIS ICFEVAHESGSLYHLLSHFIYNDLNMTKIESRPVEGRSWEYRFFVDFEGSLSDGAVKNAI RGLREESRSLRILGNY >gi|224461045|gb|GG657759.1| GENE 2554 2685095 - 2686387 1606 430 aa, chain + ## HITS:1 COG:CAC3262 KEGG:ns NR:ns ## COG: CAC3262 COG2607 # Protein_GI_number: 15896507 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Clostridium acetobutylicum # 1 426 12 422 426 274 37.0 3e-73 MRTNELILYKHMEQQQILDDMTFLMENFDNEYYNKEDMRSLLFDVVNELLELAVSHGFEG NLWHDYLTYLLASDENAYSTSCEIVGNVDGSINEAALHDFEIFKELFDYDFSAMEEELGA DCLSFIHNYSGFGDEHGKVFNTRIRSRICGLGEALAGAAGGKEFKDTVTQFYKEFGVGKL GLHKAFRIEHTEEGAEIIPITKIAHVHLDDLIGYEIAKKKLIDNTKAFVEGRRANNCLLY GDAGTGKSSSVKAILNQYYDQGLRMIEIYKHQFQDLNAVISQIKNRNYKFIIYMDDLSFE EFEIEYKYLKAVIEGGLERKPDNVLIYATSNRRHLIRETFKDKADRDEELHTNDTVQEKL SLVARFGVTIYFGRPEKKEFQDIVLKLAKRNDIGLPEEELLLEANRWELSHGGLSGRTAQ QFVDYLLGMK >gi|224461045|gb|GG657759.1| GENE 2555 2686505 - 2688112 186 535 aa, chain - ## HITS:1 COG:no KEGG:ELI_3403 NR:ns ## KEGG: ELI_3403 # Name: not_defined # Def: cell wall/surface repeat protein # Organism: E.limosum # Pathway: not_defined # 351 481 7 135 263 84 38.0 1e-14 MEWNKILKHFKIASIAGAVILAVFSINQQEVKAVDLLADFTGALDIKNGNITLSKDGKYT QKDKNGTSSTGTFDGTYTISQSSDEYNITVEDGAFPVINVNGLSITEPTENESSGSGIHI KSGAVVTLVLGAQKTSFTGRDNYPGITLETGATLNIIGNGTLTVISGSGECGISDTGRRK GGQLSVGEEAALRTYSSQKEGAICADVTASSKKIVQGTLLDAAKAPADNPDATFVTIKVE NRDNPTQETYPINLPLGFRSFAASTTTEGGSYVSYYPGDDGRIDRNKLLADTQPPNEAPP YMHTYNLTGSANVFAALWNLEEKEIKYEIKLNANGGTFKNPEGDKLKTQTVGYGDKITLP QENELQREGINYKFIGWYRLPDSMQAGDEWKDTDRVVQNGLELYAGWIPKKYTLSFETNG GSALAPVEVTYGSLITEPAAPEKEGFIFKGWVADGESANWDFATDTVKGDMVLTARWEPV NSAPANPEAPTNPSERKNELKKISTGDKTPLTSQIAKLFVSMAVIMEILWKKYKR >gi|224461045|gb|GG657759.1| GENE 2556 2688406 - 2690142 1508 578 aa, chain - ## HITS:1 COG:CAC2111 KEGG:ns NR:ns ## COG: CAC2111 COG1293 # Protein_GI_number: 15895380 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Clostridium acetobutylicum # 1 565 1 561 570 370 38.0 1e-102 MAFDGITISALVKELEENLTDGRIAKIAQPESDELLLTVKTPGGQKRLYISASASLPLIY LTSDNKPSPMTAPGFCMLLRKHIGGGRITGISQPKLERIIHIDIEHLDELGDLCRKTLIV EIMGKHSNIIFCDDKGMIIDSIKHVSAQMSSVREVLPGRQYFIPDTMEKQDPLNTDLAGF SAALRDRPAPLGKAIYLSYTGVSPVAAEEVCCLAGLDSSMTAKDLSDDMMTHLYRQFCYY FEQVKHGSFTPAIYYSGSDPKDFSALPVSHYSAYRRQEFTSVSELLSTYYAVKNTMTRIR QKSADLRHVVQTALERSRKKYDLQLRQLRDTENRDKFKVYGELINTYGYNLSEDASELTA LNYYTNETVTIPLDKNLTPQENAQKYFNKYNKQKRTYEALSGLIGDTADDIRYLESISNS LDIAQNEDDLLQIKEELTQAGYIRRKYTKKKVKIMSRPLHYVSQDGYHMYVGKNNLQNDE LTFHFASGSDWWFHAKGAPGSHVIVKSGGDELPDRTFEEAGRLAAYYSKNRGSDKVEIDY VEKKHVKKPNGAKPGFVVYYTNYSLVIDSDISEIEEAD >gi|224461045|gb|GG657759.1| GENE 2557 2690351 - 2691232 1097 293 aa, chain + ## HITS:1 COG:CAC1716 KEGG:ns NR:ns ## COG: CAC1716 COG1561 # Protein_GI_number: 15894993 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Clostridium acetobutylicum # 1 293 1 292 292 240 48.0 2e-63 MIKSMTGFGRCEIMEGERRFTVEMKGVNHRYLDVNIRMPKKLNFFETSIRSLLKKSILRG KVDLFITYEDSSENQVALKYNETLAGEYLTYLRQMEETFSLENDIRVSTLSRYPEVITME EQAVDEEELWNGLRQALDGAVKQFVETRTLEGGNLKNDIIGKLDGMLELVAYIEERSPEI VAEYRQKLEEKVRELLEDTQMDEGRIAAEVVIFADKICTDEEVVRLRSHIEHMKETLKSE EAGIGRKLDFIAQEMNREANTILSKANDLEVSNRAIDLKTEIEKVREQIQNIE >gi|224461045|gb|GG657759.1| GENE 2558 2691247 - 2691867 727 206 aa, chain + ## HITS:1 COG:L149828 KEGG:ns NR:ns ## COG: L149828 COG0194 # Protein_GI_number: 15673881 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Lactococcus lactis # 1 204 1 204 205 208 53.0 6e-54 MNKKGILTVVSGFSGAGKGTIMKELLKKYDNYALSVSATTRAPRPGETDGREYFFKTKEE FEKMIAQDELIEYASYVNNYYGTPKAYVEEQLEAGKDVILEIEIQGALKVKEKMPDTLLL FITPPSVEELRKRLVGRGTETMEVIESRLKRAGEEAEGMDRYDYLIVNDKLDICVEDVHE IIRGEHLRSFRNAEFIEHMKAELKGE >gi|224461045|gb|GG657759.1| GENE 2559 2691871 - 2692113 398 80 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1283 NR:ns ## KEGG: bpr_I1283 # Name: rpoZ # Def: DNA-directed RNA polymerase omega subunit RpoZ (EC:2.7.7.6) # Organism: B.proteoclasticus # Pathway: Purine metabolism [PATH:bpb00230]; Pyrimidine metabolism [PATH:bpb00240]; Metabolic pathways [PATH:bpb01100]; RNA polymerase [PATH:bpb03020] # 1 80 1 80 90 88 61.0 7e-17 MLHPSYTDLMKVVNKDVEEGETKVVNSRYSIVMATAKRAREIIDGSMPLVHAKDGEKPLS VAIDELNCGKITVVGEEEEQ >gi|224461045|gb|GG657759.1| GENE 2560 2692185 - 2693510 810 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229215236|ref|ZP_04341567.1| SSU ribosomal protein S12P methylthiotransferase [Dethiosulfovibrio peptidovorans DSM 11002] # 15 440 1 412 416 316 39 3e-84 MNILFISLGCDKNLVDSEVMLGLLDREGYQIVDDEAEADIIVVNTCCFIHDAKEESIQTI LEMAEYKQTGRLKALIVTGCLAQRYQKEIVEEIPEVDAVLGTSSYDKIAEAVKEALEGHP CMEMEDIDVLPLVESKRLVTTGGHYAYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLVK EAEALAEQGVKELILVAQETTLYGKDIYGEKSLHRLLRKLCGIEGLRWIRILYCYPEEIY DELIQVIKEEKKICHYLDLPIQHANDDILKRMGRRTDKKQLIEIVGKLRKEIPDITLRTT LITGFPGETIKQHEELMEFVDEMAFERLGVFTYSPEEDTPAASMPDQIPEEIKSDRQAEL MELQQDIVFEQAESMVGQKVLVMIEGRVADENAYVGRTYRDAPGVDGLIFINTEEELMSG DFAMAEVTGASEYDLIGELIS >gi|224461045|gb|GG657759.1| GENE 2561 2693498 - 2694049 390 183 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 1 178 476 669 904 154 43 1e-111 VDIMNLPNKLTVLRIIMVPFFVLFMLTDLGGSANKWIALVLFCVASLTDMLDGKIARARN LVTNFGKFMDPLADKLLVCSAMICLIPLGKLDAWIVIVIIAREFIISGFRLVASDSGIVI AASYWGKFKTVSQMFMIILLIADLGSVFDVIGTVLIWVSLILTVVSLIDYVVKNKEVLTQ GGM >gi|224461045|gb|GG657759.1| GENE 2562 2694052 - 2695299 346 415 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 254 410 746 902 904 137 47 2e-30 MTVELISVGTEILLGNIVNTNAAYLAEKCALLGLSCYHQSAVGDNEERLEDAIKLALSRS DIVILSGGLGPTKDDITKEVTAKVFGREIKEDAHTKARIQEYFRQVHSGQITPNNWKQAM VPEGAIVVDNHNGTAPGLIIEENGKAAILLPGPPNEIKPMFERDIASYLNKLQPEGIYSK MVKICSVGESKAETMVADLMDAQTNPTLAPYAKTGEVHFRVTARAKSEEEAEQLMKPMVD ELYKRFGDKIYTTEEEVTLEEAIVELLKEKNLLVTTAESCTGGLLAGRLLNVPGASSVYK EGYITYSNDAKERILGVKRETLMEYGAVSPQTAYEMAAGAAKAAGADAALSVTGIAGPGG GTKEKPVGLVYIGCCVKGNVRVEEFYFTGSRDKNRDYSVVRALTLLREELLKHHS >gi|224461045|gb|GG657759.1| GENE 2563 2695313 - 2696797 1603 494 aa, chain + ## HITS:1 COG:FN1295 KEGG:ns NR:ns ## COG: FN1295 COG0454 # Protein_GI_number: 19704630 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Fusobacterium nucleatum # 21 153 7 131 135 73 36.0 8e-13 MDIRIVRQQELLPALHLIWDVFAEDVAPSYAPEGVEEFRDFIKYDNISPMCGRGELIFFG AFEDDELKGSMAVRRDGHICLFFVKKTCQGQGVGRRLFEAAKAYCTEVLKVNKMDVNAAP DAAGHYSSLGFQQSGEEQTVNGIRFLPMELKLEGTGRTSAGKSKVPLIVGIAAGGVLLLA LAVFGIYGAARGIYGYVHEHYPDSYTEPFDDRDSHDGRDHDDRGYDGHDRGEHSWDYYDG TYGDDEDELSGLESIPVYEADDLSFETEEKLYEYADEEKKSMVIDFQVKYPQINGLDEKT GKKVNDELKNCAMETVDKIYTNPSESVKEGVLASEYPALVSYVDYKISYMNNEFVSVVFQ DYSYQGDSSTYYVNLRTRNISLKDGTVYEVKDIINTNEAFIDDWLDRMRGEAGDEAMLSE LSRGQMEEALKGDSLDGVYVANFFANANGIEIGFDLNYKADDTNNLGYAWVTAPFDFGDI REYKTKSAFWKAID >gi|224461045|gb|GG657759.1| GENE 2564 2696893 - 2697585 734 230 aa, chain + ## HITS:1 COG:CAC2565 KEGG:ns NR:ns ## COG: CAC2565 COG0822 # Protein_GI_number: 15895825 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 230 1 230 230 380 83.0 1e-105 MIYSHEVEMMCPVAQGANHGPAPIPEEAKWVQAKEVKDISGLTHGVGWCAPQQGTCKLTL NVKEGIIQEALVETIGCSGMTHSAAMASEILPGKTILEALNTDLVCDAINTAMRELFLQI VYGRTQSAFSEDGLPIGAGLEDLGKGLRSQVGTMYGTLAKGPRYLEMAEGYVTGIALDDH DEIIGYQFVSLGKFTDFIKAGDTPNDAWEKAKGQYGRVAEAAKIIDPRKE >gi|224461045|gb|GG657759.1| GENE 2565 2697622 - 2698632 1185 336 aa, chain + ## HITS:1 COG:no KEGG:Closa_2929 NR:ns ## KEGG: Closa_2929 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 336 1 336 336 578 91.0 1e-163 MALFESYERRIDKINEVLNSYGIASIEEAEKITKDAGLDVYNQVKGIQPICFENACWAYI TGAAIAIKKGCTTAAEAAAAIGEGLQAFCIPGSVADQRKVGLGHGNLGKMLLEEDTDCFA FLAGHESFAAAEGAIGIAEKANKVRQKPLRVILNGLGKDAAKIISRINGFTYVQTEYDYF TGELKEVQRIAYSDGLRSKVNCYGANDVREGVAIMHKEGVDVSITGNSTNPTRFQHPVAG TYKKECIEQGKKYFSVASGGGTGRTLHPDNMAAGPASYGMTDTLGRMHSDAQFAGSSSVP AHVEMMGLIGAGNNPMVGMTVAVAVMIEEAAKAGKF >gi|224461045|gb|GG657759.1| GENE 2566 2698735 - 2699277 509 180 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570528|ref|ZP_03779553.1| ## NR: gi|225570528|ref|ZP_03779553.1| hypothetical protein CLOHYLEM_06630 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06630 [Clostridium hylemonae DSM 15053] # 1 180 7 186 186 365 100.0 1e-100 MGKKNNINYLPLFASSPYYSKKEFQFPITAVNKTVTDTSVLKNNSGITLLYIRDGRGTII VNTRKYPVHKGLLMVLGAYHYYQVQPGEVPLELTKCRLSYDTFLYMAANPYYRFSEVRLN VDPITCLLEGRMLIRTEQVIDELVAATAKHKHQGGETEFFLCMKLMGIMQKTYNNDIWKK >gi|224461045|gb|GG657759.1| GENE 2567 2699279 - 2700508 817 409 aa, chain - ## HITS:1 COG:lin2118 KEGG:ns NR:ns ## COG: lin2118 COG4753 # Protein_GI_number: 16801184 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Listeria innocua # 185 284 391 490 494 68 36.0 3e-11 MKEAIKSKSICGRPVHSFFSGRDKYLRLQKHCISDITPPISENESIFVFVTGGSGAITIN GVSFPLKRGSFIWLQSYHTFTIRAGSVQPLLMSVCVYDYPLSSFLTFHEPEPGTVDAIID APPVISLDGARLDKIEALFHEFEEEDSCFDPGSALIKVAVLGQFANFFIHHSIKQHRPET NCERPLGWKAVLYISAHFAEDLTSQSVAAHFGSAAAVLNRELRLISGYSFSQFLNRVRVN IASVALLYDGMSLSYVAAHSGFTSEVAFYRIFKKYMGTTPIEYRNQLLNDGSGVYRGMIM STTLMEVLNHTYSSFSEPVDIKEASKRLYISESVIRDLVYETFRSHYKDLAVLTRIRHAE ALLLTTDLPIVDIAVNVGFNCSRSFTRTFKKIYEMAPSEYREAHRGGKK >gi|224461045|gb|GG657759.1| GENE 2568 2700718 - 2702262 1297 514 aa, chain + ## HITS:1 COG:MT0224 KEGG:ns NR:ns ## COG: MT0224 COG0318 # Protein_GI_number: 15839594 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium tuberculosis CDC1551 # 50 502 55 533 537 201 30.0 3e-51 MDLMGDFFNKFNLGTSDFVTPGKQLQYISKHKAYTTAVICIDKDQTVSEITWKQLHTRSN QLAWMLGEYGIKERATVIVAYPNSIEHLIAAFAIWKAGACYMPISSKTAGAELDEISRII NPAGAFADFAVPDTEFCLNSGEMYEVMRQYPEKTPPDVRSDPNMISPSGGTSGKLKFIRQ NMPGGMTDSMLKGWFEMSGMDFEQRQLLVGPLFHGAPHSSAFNGLFAGNTLVIPRNLCPD NICRLIKEYKIEFIQMVPTLMNRIVKLPGIRKEDFASVKALFHTGGYCAPYLKRKWMELL APEKIYEMYSMTEVIGMTCIRGDDWLKHPGSIGLPVGEGKVSIRDESGKELAPYELGDIY MSSPGECFLTEYINHEPLKVSDGEYRSVGDIGYVDEEGYLYFSDRRSDMLVIGGENVFAA EVEAALVRHSKVADAVVIGIPDEEWGRRLHAVVEARQEIPADELRAFLGQYLSPYKIPAT FEYVKTIERGDNGKADRKRIFEDCLSREKCSCKE >gi|224461045|gb|GG657759.1| GENE 2569 2702307 - 2704229 1994 640 aa, chain + ## HITS:1 COG:CAC1044_1 KEGG:ns NR:ns ## COG: CAC1044_1 COG1902 # Protein_GI_number: 15894331 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 3 392 2 412 413 210 34.0 6e-54 MGYEALFSPFKVRGLELKNRIILPGMNTKMTKNKHDVGDDMIAYHVARAKAGCALNIFEC VALCPAPHAYMYMGLYNDHHVRQLRRLTDAVHEAGGKMGIQLWHGGFSPQLFFDETNTLE TPDTLSAGRIHEIVEEFGCGARLAVQAGFDAVEFHAAHSYLPHEFLSPGMNRRTDEYGGS FENRCRFCFEVISAIRSNIPEDMPFFMRVGCIDELMEQNMTEEEIVEFINRSADLGVDVA DISRGNAMSFATVYEVPPFNLPHGFNIENIYNIKKQIKIPVVGVGRINTGEMANQVIEDG KFDLVAIGRAQLADPEWVTKVREGREELIRHCIGCDQGCYDAVIDPKMKHITCTRNPMLC LEYKGLPKTAAPEKVMIAGGGMAGLFAAEVLKKRGHEPVIFEASDRLAGQFTLAGVSPMK QDWAAAAKWEAEEIGRLGIEFHLNTPVTPKLIEQFAPDRVIIATGSEYTAPAIPGIDGPN VYTQYEVLRGEASPAGHVAVIGCGLVGAEVAELLASRGAQVTALEKKGVGTGLNMLRRMF LNPEFKYYKIAKMSGALVTSLEPGMVNYEITDRKTKEVSRGTLKCDAAVICTGITARPCG KLKETCEAAGIPVQVIGDALAARDARTASREGYEAGMALQ >gi|224461045|gb|GG657759.1| GENE 2570 2704276 - 2704785 664 169 aa, chain + ## HITS:1 COG:no KEGG:nfa24700 NR:ns ## KEGG: nfa24700 # Name: not_defined # Def: hypothetical protein # Organism: N.farcinica # Pathway: not_defined # 20 168 6 156 160 106 37.0 3e-22 MSIEERLEALEKEIQKMKDIEEIKKLKGQYFRCLDGKFWDELETTLSPNIVTSYSNGKLV FHGPKEVTDYFKKAMPREEISMHMGHTPEITIDSETTATGRWYLEDKLIFTEESKYAGSG VNGGAFYTDKYEKVDGKWYILETGYLRVYEEHFMRDPKIKITMNMHKTK >gi|224461045|gb|GG657759.1| GENE 2571 2704811 - 2706085 1396 424 aa, chain + ## HITS:1 COG:caiB KEGG:ns NR:ns ## COG: caiB COG1804 # Protein_GI_number: 16128032 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 8 399 7 400 405 251 38.0 2e-66 MAGLKDFPSFGALAGLKILDSGSNIAGPLGGGLLSECGATVIHFEGPKKPDNQRGWYGYP QNHRNQLSMVADIKTEEGREIFMKLIKWADIWVESSKGGQYDRLGLSDEEIFKVNPKIAI VHVSGYGQTGDPSYVTRASYDAVGQAFSGYMSLNGTTEALKTNPYLSDFVCGLTTCWAML ACYVSTVLTGKGESVDIAQYEALARIMDGRVMQFATDGVKVPRTGNKDGQAALFSFYTCK DGRTIFIGMTGAEVCKRGFPIIGLPQPGSGDPDFPEGFTGWLIDSPVGRRMEAAMEKYVS EHTMEEVEAVMQENQIPCQRVYELEDCISDPHWIARETITEWDDPMLGHVTGLGLINKFK NNPSKIWRGAPLFGMDNRDILRDLGYTDEEIDGLYEKGITNEFDRETTIKRYRLKEVIPH MKDE >gi|224461045|gb|GG657759.1| GENE 2572 2706139 - 2707566 1529 475 aa, chain + ## HITS:1 COG:CAC3668 KEGG:ns NR:ns ## COG: CAC3668 COG0477 # Protein_GI_number: 15896900 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 1 429 1 430 486 121 24.0 4e-27 MNTAIRSNYKKGFVPFGIAALLVSLIGGFTAVLGPAFVADIGIDYSNTTWISLALAMSTA ACAPILGKLGDILGRRTTLLLGILVFTAGNALTAVATSLAFMLAARFIVGIGTAAISPVV MAYIVTEYPPEETGKGFAVYMLISSGAVVIGPTCGGLIMNAAGWRAMMWVCVALCAAVFL ICMFTIKKTAFQKKKMTDFDRAGSVLVLIFFSLFLCIPSFGQNIGWSSVQFIAVASVAAV SLICLVFVERKAGSPVFNGQFMARKAFILPVIILFLTQGLMQANMTNVIVFVRYTQPDNV IISSFAISIMYIGMSLGSVIIGPMADKKEPRTVLTFSLLLTGVGCGIMYFFTAESSVAIF AAALGILGVGLGGNATIFMKVALSGLSSEVAGSGTGTYGLFRDISAPFGVAVFVPLFTNG VTSRMTEAVAGGASEGAATLLAAVSSIKTLTVIELGCIVAGIAAVRMLPRIHENN >gi|224461045|gb|GG657759.1| GENE 2573 2707586 - 2709571 2093 661 aa, chain + ## HITS:1 COG:lin0492_1 KEGG:ns NR:ns ## COG: lin0492_1 COG1902 # Protein_GI_number: 16799567 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 8 363 7 363 364 197 34.0 4e-50 MDMKDSKLFSPLKVGSLTLKNRVGMAPMSMDYEAEDGTVPKRLADIFVRRAEGGTGYVVI DAVTVDHNYQYIGNTTCLDSDDLVPQFKVFADRVSAAGSTLIPQIIHPGPESICGFRKIP PLGPSVNTNANCHVSRSVSIEEIHTIIRQFGAAARRVQEAGCGGISLHCAHAYMLPGAFL SPLRNKRMDEYGGCLDNRARFILEVIEEVRKNVSADFPVFLRISGDERAEGGNSLEDMLY LAPKFEAAGVDLLEVSGGTQYEGLEYIIPSQGKRIGMNIYEAAEIKKVVGIPVYAVGKIN DIRYAADIVERGIVDGVAVGRPLLADPDLCKKAKENRFDDITPCGSCGGSCITRTAQSPQ CRCHINPLVGREYDFPAVPAQRSKKTLVIGAGPGGMYAAVTAAERGHDVTVWEAEDQIGG QLNLAVVSPGKQEMTKWLVHLNHRAKKAGVTFEFGKEATAEAVREFAPEAVIVATGARPL VPPIKGTKEYPVLTAHDFLRGRFVIPKGRVCVLGGGAVACETAETILANARPTAFTRGYD ASIGDVEVTLVEMLPQLLTGVCEPNRAPMLRSLKKSGVHIKVNTKILEVTDHDVKVQQGD GTEEWLRGFDYILFGLGSRNYDPLSETLKEFVPEVHVIGDAVRARQASFAMWEGFEAAYS L >gi|224461045|gb|GG657759.1| GENE 2574 2709610 - 2710158 599 182 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570536|ref|ZP_03779561.1| ## NR: gi|225570536|ref|ZP_03779561.1| hypothetical protein CLOHYLEM_06638 [Clostridium hylemonae DSM 15053] BaiI [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06638 [Clostridium hylemonae DSM 15053] # 1 182 1 182 182 360 100.0 3e-98 MSVKIISKDEKDRELIMETVRNARNQDYTPEMLCELQKVIETKYYYWWLMDMKGEEYAPD LFGRNFHYFCNGHLVTDDGAYQALTSKWVNSAMVTMHMGHQPLVWLMDENNARGVFQYED HHVYKEDDSVVETWMVYCDDFEKDSGGTWHITRMRMYQKQADGRYRDPFPPKDWVPEGWK ES >gi|224461045|gb|GG657759.1| GENE 2575 2710155 - 2710358 110 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570537|ref|ZP_03779562.1| ## NR: gi|225570537|ref|ZP_03779562.1| hypothetical protein CLOHYLEM_06639 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06639 [Clostridium hylemonae DSM 15053] # 1 67 1 67 67 115 100.0 8e-25 MPEITARFADRKAAKRLTGKKRVSRRIPGESGEILVLTPALSYDDTVTLGLKSILGIKCI TVEGIRP >gi|224461045|gb|GG657759.1| GENE 2576 2710365 - 2710457 67 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRVIYENKLKDYMNRKNLNTILIEAYAPSS >gi|224461045|gb|GG657759.1| GENE 2577 2710564 - 2711901 1462 445 aa, chain + ## HITS:1 COG:MK0550 KEGG:ns NR:ns ## COG: MK0550 COG0069 # Protein_GI_number: 20093988 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Methanopyrus kandleri AV19 # 55 445 27 422 429 318 44.0 1e-86 MARYKCGVCGYIYDEEKEGKPFEELESCPACRQPKESFQAADGEDGAGQKCGYRYMEVIR QMAATGRPVIEAMGTQMPVPGFDEILVLGAQLNPPPLDAGEDVNIRTVIGKHAKKPMVLE GPMYVSHMSFGALSREAKTSLARGSALAGTAMCSGEGGILPEEKAAAYKYIFEYVPNRYS VTPENLREADAVEIKIGQGTKPGMGGHLPGDKVTEEIARVRNKPLGKDVISPSKFEDIST KEELKELVWQLRASSQGRPIGIKIAAGRIEKDLEYCVFAQPDFITIDGRGGATGASPRII RDSTSVPAVYALHRAKKYLEASGADIDLIMTGGFRVSADAVKAIAMGASAVAVASAAMVA AGCLQFRDCGSGRCPAGIATQDEKLRARFDARAASERVGNYFKAAFDEIRTFARITGHKD IHDMTVEDLCTISRDIAEYTDIPHA >gi|224461045|gb|GG657759.1| GENE 2578 2711952 - 2712467 672 171 aa, chain - ## HITS:1 COG:SP0049 KEGG:ns NR:ns ## COG: SP0049 COG4767 # Protein_GI_number: 15899994 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Streptococcus pneumoniae TIGR4 # 9 152 6 150 169 87 40.0 1e-17 MKQNPKYNRLTAALFVIYLLLVTWIILFKMQFSLSEFGRFRSINLIPFAGSLIVNGKVRL SEIFENILVFVPVGIYLSMLRSDLSFLKRTALIAGYSLLLETLQYILAVGATDITDLIDN TLGGIIGIGLYAGAGRLIRQKDKLDKILNILAAAGTVCLCALILILILANL >gi|224461045|gb|GG657759.1| GENE 2579 2712608 - 2713525 1365 305 aa, chain + ## HITS:1 COG:sll0507 KEGG:ns NR:ns ## COG: sll0507 COG0598 # Protein_GI_number: 16332029 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Synechocystis # 121 304 194 378 387 87 32.0 3e-17 MQYRLDGSIVPVGDDETIEDNEALVVIITSEEYESEYKKQFQKKMLLNIYHTHYCRADLL KDCVIGTFVIPRKDDLLGKYMTFGYYMTAKKLVLVDDSGIIEKLVKHMADTLTVEETYTA HFLFELMEYLVKEDVIFLQNYEKKLSELEGVLLQGVITDFDRQMLSIRKELLALQSYYQQ LIEVSETLEENQNHMFDDEDCRVFDLYSKRADRLFDNARRLQEYSLQLREMYESQIDIRQ NQIMKFLTVVTTIFLPLTLIAGWYGMNFVGMPELKSPYGYTVVIIVSIAIIVVEIWLFKI KKWFD >gi|224461045|gb|GG657759.1| GENE 2580 2713540 - 2714232 670 230 aa, chain + ## HITS:1 COG:no KEGG:TDE0353 NR:ns ## KEGG: TDE0353 # Name: not_defined # Def: GDSL family lipase/acylhydrolase # Organism: T.denticola # Pathway: not_defined # 2 229 302 529 531 152 39.0 1e-35 MVLCIGDSLTLGVMGYSYISFLRREERIVNLGVNGDSLWGGTRRLRSCLKKSKYKSADTV VISLGTNDILLPYLSGRSLFWKAQCRLRNLYRSFSSDIWEFAERYETIVRELADEEYKVI LIGLPYIQLAGYPLGKVEAYNDCIRSTAKRYGAQFIDIYSMQSRHVKKVRTCSWGRYNFG RLADGMFMLLFPHRKDVLSRKRGLAVTVDGVHFNSGSARLLAGAVERVLG >gi|224461045|gb|GG657759.1| GENE 2581 2714249 - 2714500 266 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570543|ref|ZP_03779568.1| ## NR: gi|225570543|ref|ZP_03779568.1| hypothetical protein CLOHYLEM_06645 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06645 [Clostridium hylemonae DSM 15053] # 1 83 1 83 83 141 100.0 2e-32 MFFDRTEVFMTMELARYARAKEILDGKGIPYTVKTKSSGGYSANSHRMGNFGEKFEHSIT YYIYTKKEHAERAKHFIYSGLHG >gi|224461045|gb|GG657759.1| GENE 2582 2714607 - 2715710 1191 367 aa, chain + ## HITS:1 COG:CAC3472_1 KEGG:ns NR:ns ## COG: CAC3472_1 COG1396 # Protein_GI_number: 15896711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 116 1 114 125 82 35.0 2e-15 MAAVNIGKNIMKYRRETGITQEQLAEHMGVSKSSVSKWETGNAYPDICLLPELATLFNIS VDTLMGYEPQLTKKRIAKLYRELAEAFPSEPEGTYEKCENMIKKYYSCFPFLYKMALLYL NHAVLMKEPDTVMERAWMLCRRIEQDSADASLIKDTVSLEVTILIMRNKPLEALEILGED VRPLGQDAEMTGAAYEQLGDRKKAREIFQVCAYQHLLFFMQDSVNLMMLSTEDREFCDET IKRLTEIIKLYGLEKLHFYTALQFYMAAAELYAGRNEEGKAVEMIERYTDVVLKTPMPWS LASRDSYFTDVDDWLKRFDADKGTPRGSRLIKESLSASLTQNPVFQHMREEFRFRTCVEK LKKLQEE >gi|224461045|gb|GG657759.1| GENE 2583 2715714 - 2715923 427 69 aa, chain + ## HITS:1 COG:no KEGG:LC705_00137 NR:ns ## KEGG: LC705_00137 # Name: not_defined # Def: hypothetical protein # Organism: L.rhamnosus_Lc705 # Pathway: not_defined # 10 68 11 69 71 81 64.0 1e-14 MNAFDVLREYLPVLLPLILIELGLALTALIHVLRHRHYKFGNRALWVIVVLFVQIIGPVA YFVFGREES >gi|224461045|gb|GG657759.1| GENE 2584 2715924 - 2716835 339 303 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 302 12 308 318 135 29 1e-29 MNTLEIHALKKRFGQNDVLKGVELSVPPHSVYGLIGQNGAGKTTTMRIVLGLLAQDAGEV YVCGEKVKYGETKTNRYIGYLPDVPEFYGYMSPEEYLGLCGRISGMDHSGIKEKSEELLC LSGLKDSRKKRIAGFSRGMKQRLGIAQALLNEPKLLICDEPTSALDPMGRKEILDILEQV KEKTTVIFSTHILSDVERICDSVAILHNGTIIQDGDLEELKMRHMADSLLLELRRPEDMK GLLGKLQGLQAKQHDKVSLVIHAPDIYETQYRLMKILSESRTAVEKLEIQEPSLEHLFME AVR >gi|224461045|gb|GG657759.1| GENE 2585 2716832 - 2717596 905 254 aa, chain + ## HITS:1 COG:no KEGG:Cthe_1535 NR:ns ## KEGG: Cthe_1535 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 1 254 1 254 254 182 44.0 1e-44 MRGFAAFTRKEFTEYLRSYKLLIIVMVFLLLGFMNPVSAKYLPELMENFMPAGMKMEIPE PVIADAWAQFFKNVPQIGLVVMVIITSGTMSQELSRGTLLPVLTKGLKRRAVWLSKFTGA AVLWTGSYFLSFAVTYVYSLLFWDKASVPELGTAVVFAWLFGLLLQSVVLLGSTLSRSYA GGLLSAGALVLAGMVMSLFHGAGRYSPLRLASDNMSLIDGTLKTGDFLPAAAVTGLLTAA AVLAGIMVFDKKQL >gi|224461045|gb|GG657759.1| GENE 2586 2717676 - 2718509 846 277 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0207 NR:ns ## KEGG: Cphy_0207 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 267 1 267 285 292 54.0 8e-78 MFGYVNIYEPELKVRDFRKYKSYYCGLCHTLKERYGFLGQMTLTYDMTFAVVLLTSLYEA ETEHITCPCKVHPVKKQDMLVNEYTAYAADMNMVLAYFHMKDDWVDEKKISGFAGTYALH RKVKKIIKKYPRQSRVICRSLKELAACEREGVTDIDIPAGCFGRLMSELFVYRKDHWEER LRTLGFFLGKFIYIMDAYEDLEKDVKEGCYNPLKETADRPDHEDRCRQILQMMIAECCAG FEQLPCLLDVDILRNILYDGVWNRYKKVQQQKKEAKE >gi|224461045|gb|GG657759.1| GENE 2587 2718516 - 2719166 736 216 aa, chain + ## HITS:1 COG:CAC0648 KEGG:ns NR:ns ## COG: CAC0648 COG2214 # Protein_GI_number: 15893936 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Clostridium acetobutylicum # 4 210 3 193 195 109 35.0 4e-24 MTKNPYEVLGVSPNASDDEIKSAYRELTRKYHPDANVNNPLADLAEERFKEVQEAYDTIM KEREQGGGYRYGYGGAYGGTGGGQQAGYDSAQQNVEMQAVYNFINSRRFREALNLLDRMP DRTSQWYYASAYANAGMGNNVLARDHAAQAVNMEPNNVQYRQLLSQLEWNSQRYQNNPYG GYGAGGQTCGTGNMCCDLCIADQLCECMGGDLCTCI >gi|224461045|gb|GG657759.1| GENE 2588 2719157 - 2719690 555 177 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0209 NR:ns ## KEGG: Cphy_0209 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 176 1 187 189 117 40.0 3e-25 MHIKAKSMAVCGLMLALSVVFMVLGSVIETSTLFLLAAASFFTGIVIREFGLGMGAAFWI AAVLLGLLLAPNKFYVITFAAMGFYIEAAEFIHRKLGTIANLKNRSAVFWVLKYIVFNIL YIPAVFGFRELLFGRSISGGFLAVVIVAGQAGLFIYDRAYEYAQRQIWSRMRKHLMN >gi|224461045|gb|GG657759.1| GENE 2589 2719754 - 2720617 136 287 aa, chain - ## HITS:1 COG:no KEGG:SpiBuddy_2600 NR:ns ## KEGG: SpiBuddy_2600 # Name: not_defined # Def: hypothetical protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 24 287 29 311 319 82 28.0 2e-14 MNRLITHTSTYADNILCQCSSGIVHSVYNKTINIQTEGQLLALQSAASPLSPVSLVTNLE QEDLASPVIRPGQPVRLSGEAVEISSSGQLSVFTYRPVHIYRSGLVPIPSGSSSAALYSQ VRMAVKGSDNSGFCLLFSSAPRTAAPNDLMLSAAGKRMSRCRILFREKEYSEAAGVLAGL IGLGIGLTPSGDDFLCGILAALTLCGQDAHPFARALAIQLEGRLSDTNDISRTFLHCALQ NQFSQAVCSLPHLPPADEILRNFSAVGHSSGTDTLCGILYALDLLLP >gi|224461045|gb|GG657759.1| GENE 2590 2720890 - 2722299 1549 469 aa, chain + ## HITS:1 COG:STM0523 KEGG:ns NR:ns ## COG: STM0523 COG0044 # Protein_GI_number: 16763903 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Salmonella typhimurium LT2 # 2 446 3 432 453 263 36.0 6e-70 MYDLVVKNGKLVTPDRIYEADIAVKDGVYSAFLAKGTQTEAKEVIDAEGNYVFPGIIDCH AHLNEPGFEYREDFETGSRAAAVAGCTCLIDMPLNNDPSLMNKEIFDLKMGRISKHSVVD FALWGGIVGDYDNEPGSVKNNMNDLVDLHKCGVAAFKGFTCPNGDLFPTVNMGNVRKALE ILKPYNALCGFHCEEFGQVLEREREAKAREGRSSEEKIRDFLDSHDVWTEYVATKNVIDM ARATGGRVHICHVSHPMVAQVVKDAIHEGLPVTAETCPHYLGFTEDFVFEKGAPAKCTPP MRKQEDMEKLWDYVLDGTLSCVGSDHSPAADEEKDNAAKDIWHAWGGLNAIQYFLPMMFD MTVNKKGLSPTLIAKVMDYNPAKVFGLYGQKGAFELGFDGDIVIVDPDKEWKCTQEELLT KGHVSCFDGLEGKGAPVCTIIRGRVVAEGGSYKEDAVGYGKYVTPADAR >gi|224461045|gb|GG657759.1| GENE 2591 2722327 - 2723292 1300 321 aa, chain + ## HITS:1 COG:RSc1233 KEGG:ns NR:ns ## COG: RSc1233 COG1953 # Protein_GI_number: 17545952 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Ralstonia solanacearum # 15 314 25 346 502 98 26.0 2e-20 MSDVKNEVKKESGSLAPIQEKDRIMGWGSYLMLWLGGCISIGTLTMGSAQLDKGLNLMQV FLAVLIGSTILVIGICANDRFSYKSGAPYAIQLKSAYGTKGNIVPVMIRGLPAIVWYGFQ TWLGGSAINQISIAIFGYDNVVLFFILFQVLQIILSVKGFHGIKWVENVGGVVIVCAMLY MLYVCVTQYWGVIGDKLISREGSWGMPFIAAIIAFFGNSTTVMLNAGDYSRELKGGFSVG KRGVAYFIAMVPTTVLLGLIGAMASTATGIANPINAFSQMVQNKVLLVATLGFILFAQMT TNLASNVVPPAYAFMDAFLAS >gi|224461045|gb|GG657759.1| GENE 2592 2723409 - 2723717 235 102 aa, chain + ## HITS:1 COG:no KEGG:Pden_0678 NR:ns ## KEGG: Pden_0678 # Name: not_defined # Def: permease for cytosine/purines, uracil, thiamine, allantoin # Organism: P.denitrificans # Pathway: not_defined # 1 96 357 449 450 90 42.0 2e-17 MFVKIYTAFFGPIFAVLITDYYIMHRGKIEGEKLDDLYNDKGNHAGVNWAAIIATAVGAV IGLINVDISFFTATIPTGLVYYFCMKKMPSCGRFRKGTSLEK >gi|224461045|gb|GG657759.1| GENE 2593 2723733 - 2725106 1598 457 aa, chain + ## HITS:1 COG:STM0523 KEGG:ns NR:ns ## COG: STM0523 COG0044 # Protein_GI_number: 16763903 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Salmonella typhimurium LT2 # 2 437 3 432 453 277 35.0 3e-74 MYDILVNNGKIVTADAVTAGNIAVKDGRIAAVLAEGIEPEASRVIDAKGNYVFPGAIDTH AHLNDPGYEWREDYEHGTAAAAVGGYTTVIDMPLQNEPAMTNADLFDRKEEKVSSNAYAD YCFWGGLVPDNFEDLKGMHDKGCVAFKSFIGPVSPDYSSLNYGQAYEAMQRIKEFGGRAG FHCEDYSLIKWQEARMKREGRLDWQGFLDSRPVIAEMVATVDMIELAKATGCKVHICHVS SPDVAQKIKEAQQEGCDITAETCSHYLSLTDKDVIENGPLFKCAPPLRSQEEVDRLWKYV EDGTFSGIASDHSPCSYDEKFKEILGNKIENVFDVWGGISGIQSGFQVAFNEGCVKRDIC PSVLADSMARRPAKAFGIYGRKGDIKPGFDADLVIVDPEREWEITGESLLYVNKISAFAG MKGKGLPVCTMIRGNVVAEDGKITAEKGVGELIRRLS >gi|224461045|gb|GG657759.1| GENE 2594 2725135 - 2726496 1521 453 aa, chain + ## HITS:1 COG:BS_ywoE KEGG:ns NR:ns ## COG: BS_ywoE COG1953 # Protein_GI_number: 16080700 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Bacillus subtilis # 19 438 15 469 490 145 27.0 1e-34 MSNIVENLELNPELVTNVDPDLQPTKKRIMGSLSYAASFMGGCVSIGTFSMGAGLIGVLT VGQAILAMIIGCLVIAIALVIIGNCGHKYGIPYTVQLRSSFGTAGVKIPGLLRGVPAIIW FGFQSWVGAGAINSCFKILFGFDNLPVVYALFTILQVALAIKGFEGIKWLENISCIFIIA ILAYMLYVVKTQFATEIDDVFSGIKGTWGMPFWAATTSFLGIYSTMIINASDYSRNLKEN VKSVRTGSIYTVAILPVTLFMGLIGLLVTAATGNSDPVVVFSTTMGSKFLTVVTLLFIAF AQVTTNVLNNIVPPSYVLMESFHMKWSHATIVVGILSACCMPWKLVTDQSAAGLSLFTQF YSAFLGPIFAVMAVDYYILRKKKLDINNMYDKQGVFKGVNWAAIIAIIAGSLCSLLIVEL SWYVSLIPTGLVYYFLMKSMKSSAPFRKGTIFE >gi|224461045|gb|GG657759.1| GENE 2595 2726871 - 2727725 760 284 aa, chain - ## HITS:1 COG:SA0310 KEGG:ns NR:ns ## COG: SA0310 COG0657 # Protein_GI_number: 15926023 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Staphylococcus aureus N315 # 29 279 29 270 275 106 31.0 5e-23 MQQKKIIEINSTLYLKHATVCSDSSVTPKACILYFHGGGLLYGERDDLPALHQKTLTEAG YIIVSFDYPLAPAAKLNTILDDVTSSISHYVKYPELYCGHALPFFLWGRSAGAYLCLLAA AQGDLPAAPEGILSYYGYGFLCDSWFQTPSSYYCSLPAVDASCLDNAGAGLQPSGGLDTH YSIYVYARQTGRWRALLYEGREKYFYLDYTLRACAALPCPLFCAHSTNDPDVPYEEFLEL SSRYQARQFIAAGNTHDFDREETNPFTAQLLQETVKFLNKNLGD >gi|224461045|gb|GG657759.1| GENE 2596 2728038 - 2728826 1005 262 aa, chain + ## HITS:1 COG:ylbA KEGG:ns NR:ns ## COG: ylbA COG3257 # Protein_GI_number: 16128499 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in glyoxylate utilization # Organism: Escherichia coli K12 # 1 262 1 261 261 301 57.0 6e-82 MSYLNDQVGYREELLMTRSVIKKENYVLLEPDGLVKNSIPGYENCDVTILGSPAMGASFA DYLVTAREGGKNSGIGGEGLETFLYVISGEVTVKNADKEEVLTEGGYIFSPESNVVSFEN KSKEDAKLFVYKRRYERVEGYSAYTVVGNANDLPWIEYEGMENCHIKDFLPAAGDFGFDM NMHILKFKLGASHGYIETHVQEHGMYFLQGKGMYRVDDEWVPVKAGDYMFLDAYCPQACY AVGREEDFAYIYSKDCNRDVAL >gi|224461045|gb|GG657759.1| GENE 2597 2728849 - 2729244 433 131 aa, chain + ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 3 125 13 136 137 120 52.0 7e-28 MGRKVVMSQNAGKTGPYSHAVDAGGCLFLSGQTPIDPAAGQLVEGDITAQTRQSFSNLFH VLEEAGLTPDDVQKVNVYLTDMDDFEAMNAVYAEQFSEPYPARSTVGVAALVGGAKIEIE MIAKKSQNIEE >gi|224461045|gb|GG657759.1| GENE 2598 2729272 - 2730324 1247 350 aa, chain + ## HITS:1 COG:ECs0579 KEGG:ns NR:ns ## COG: ECs0579 COG2055 # Protein_GI_number: 15829833 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 350 1 349 349 412 55.0 1e-115 MKLSRDELKNLMKNKLIKAGLSEEHADMTAEILTWSDERGYHSHGAVRVEYYSERIAKGG ITTDPKFEWKETGPCSAIYEGDNGCGYVASTFAMEKTIEMAKKSGIAVTGIRNISHSGSI GYYTEMAAKQDLVAIAFCQSDPMAVPFGGTEPYYGTNPISFAAPTADDRTVVFDMATTVQ AWGKILDKRSRHEAIPDTWAVDEKGQPVTDSSLVNALLPIAGAKGYGLMMMVDVFAGVLL GVPFGKHVSSMYHDLSKGRDLGQMFIVMDPSRFVGLDAFKKSMSQVLDELGEMPAAEGYG KVYYPGERAVMRRDKAYETGGVEIVDEIYDYLVSDDVHYDRYDHKNRFAE >gi|224461045|gb|GG657759.1| GENE 2599 2730339 - 2733350 3555 1003 aa, chain + ## HITS:1 COG:ECs0580 KEGG:ns NR:ns ## COG: ECs0580 COG0074 # Protein_GI_number: 15829834 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 580 1 555 555 388 40.0 1e-107 MLKTIVKKGSYHDSVVLMLLTNQISTIKGVKKVSIMMATPANKDIYRQSGLNTEELESAS ANDMVVVADVDDESLLDTIMQETEEFFKKQSTKESDKKGAEAVKSWDKALEKLPEANLAV ISIPGAYAALEADRALDEGMNVFMFSDNVTLEDEIKLKNKAHEKGLAVMGPDCGTGIIQG VPVAFTNNVTPGSIGIIGASGTGIQELTTIIDRLGEGVKNAIGTGGRDLSIEVGGTTMMD MIEAMESDTSVKVLIIISKPPAKEVRDRISDRLSNFRKPVITLFLGEKPEYHEEGFYHAY TLDEAARLAVGLVRGEEVKEAEVKADTADFFKPEEKKTIKAYYSGGTLAGEAAMLIKDAL DMKVPPQKAEGFMLKTGGHIVVDLGDDVYTQGKPHPMIDPAKRIECMQEAIDDASTGVIL LDIMLGYGSHEDMAGALLPSIIELRDKAKAEGRKLFFVATVCGTRRDFQDYDGAVSKLKG AGVIVCENNKLAVHTAIRAIGMDFEEPVKEIRPKKVAKIEKTEASDKLIQLLSEKPKIIN IGLKSFAEVAESFGCGVVQYDWMPPAGGDVRLIKILNFLRSYEGLDIDEANRSVIAKIVA SQPVIQDVVSAKTVIKELNEGKVILHAGPPIQYKDMPDPVQGSCVGAALFEGWAATEEEA RKILESGEVTFIPCHHVKAVGPMGGITSANMPVFVVKNMTDGNEAYCTMNEGIGKVLRFG AYSQEVVDRLLWMKEVLGPTLGKAIRSIDGGLSVNPLVAKAIAMGDEFHQRNIAASLAFL KEVSPIITKMDMDEKDRYDVIKFLADTDQFFLNIMMATGKAVMDGARLLTEGTVVTAMCR NGVEFGIRISGMGDEWFTAPVNTPQGLYFTGYDGEDACPDMGDSAITETLGVGGMAMIAA PAVTRFVGAGGYEDALRTSTEMTEITIDRNPNFIIPNWNFQGTCLGIDARLVVEKGITPV INTGIAHKIAGYGQIGAGTVHPPVECFEKAVTAYAKKLGFSFE >gi|224461045|gb|GG657759.1| GENE 2600 2733368 - 2734303 1208 311 aa, chain + ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 4 309 3 308 310 324 58.0 1e-88 MKKKRVVIALGGNALGKNYEEQKEAVAKTAKVIVDLVQQDMELIITHGNGPQVGMIQNAM DQLACTSEDYKETPLPTCVAMSQGYIGIDLQNAIKYELYSREMDVKVSTILSQVEVDKED EAFRNPSKPIGRFLTKEEAEKNEANGITCMEDAGRGYRIVVASPMPKRIRELQTIKTLVD AGHIVITCGGGGIPVVNDAGKLSGVSAVIDKDNVSSLLAAEMNADYLIILTAVEKVAVNF GKENQEWLSDLTVDEAREYIAQDQFAKGSMLPKIEAAIRFAESGEGRHTLITLLDKAAEG IAGKTGTVIHK >gi|224461045|gb|GG657759.1| GENE 2601 2734318 - 2735928 1813 536 aa, chain + ## HITS:1 COG:AF0806 KEGG:ns NR:ns ## COG: AF0806 COG1620 # Protein_GI_number: 11498412 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Archaeoglobus fulgidus # 11 520 4 523 544 142 28.0 2e-33 MNVPTNLFMWIMACLPIIVLLLLMIKFQWGATEAAPVGLLITIITGILFYKADIRLLASE SAKGIWSALIILLIVWTAILLYQVADEAKAFLVIRNGMRRLLPNELLVVLALGWILESFL QGITGFGVPVAVGAPLLIGIGVTPLYAVIIPLLGQAWGNTFGTLAAAWDALVMSTGLESG SPDYLAAAFWAGLFIWLWNVITGLVLCWFYGKGKAVKKGLPAVLILAVIQGGGELLLTQV NTTISCFLPSCIALVVLFLIGRMKMYREEWSLSDSPIMNRTFTSGTSDEAPADMSLLQAF VPYILLTALTMVVLVVTPVNKFLGQFTLGFSFPETSTGYGFVNQAEACFSPLAPFTHASM FLLLSSLAGIVYFKKHGWIKAGGTKRVFARSIAMTMPSGIAVIGLVIMSKIMGGTGQTMV LADGIARILGKAYVILAPVVGMIGSFMTGSNMSSNILFGDFQVTTAGLLHLDKAAILGAQ TAGGAIGSAISPSKIILGTTTAGILGSEGQVLKKIIPITLTTTLLIGAIVFVSVIL >gi|224461045|gb|GG657759.1| GENE 2602 2735948 - 2736151 348 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570566|ref|ZP_03779591.1| ## NR: gi|225570566|ref|ZP_03779591.1| hypothetical protein CLOHYLEM_06668 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06668 [Clostridium hylemonae DSM 15053] # 1 67 1 67 67 103 100.0 6e-21 MEKKNFFKTKEGGLTLAFIVILIAFALILAGLKMKGDGMCAAGFVLMAAAMLYSPLKVYV FDRIKKS >gi|224461045|gb|GG657759.1| GENE 2603 2736165 - 2737430 1417 421 aa, chain + ## HITS:1 COG:lin0541 KEGG:ns NR:ns ## COG: lin0541 COG0624 # Protein_GI_number: 16799616 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 17 417 7 406 414 302 40.0 8e-82 MKARKGIYMVIEEITGRIARDLEHLKQYTATPGNGCTRLPFSKEARQAVEYLKELMHEID LEVSEDAAGNVFGLLKGEDPDAPCVMMGSHYDSVSNGGDYDGIAGVICAIEVARLLREKG IKPKRSFVAAGFNDEEGMRFGTGYFGSGAMLGHRDVEYTKKFCDKDGISIYEAMKEYGLV PENIEEAAWEEGRIGSFLEVHIEQGPVLDAEGVELGLVDCIVGIQRYMVTVNGRADHAGT TPMDMRMDAVDAAAKVISKIADWAREKADGTVATVGYINTVPGGMNIVAEKVEFTVDIRS RNNDNINDIAARIKKALEREVAEYGGSYEIENKLTITPVELSAEMLDIMEAECKELGYSY RRMLSGAGHDALEIGQNLPAVMLFLPSKEGRSHCPVEFTKYSDFAKGTVIMQKLAEKLLD K >gi|224461045|gb|GG657759.1| GENE 2604 2737457 - 2738461 913 334 aa, chain + ## HITS:1 COG:CAC2546 KEGG:ns NR:ns ## COG: CAC2546 COG2186 # Protein_GI_number: 15895808 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 122 325 18 222 231 102 32.0 1e-21 MSSQKLNPIYKKENLRQLRRYLNMTQREFICRFLSDGEGTPSMSPATYSNLESKGGRRLD EVILSAAAALNMDSMLFSMKPEEFVRKMDIVLAGTEAAERMSRNAAKKGRIDELLFRLTM YFAEKLMDKELKKGDQIESDRVLAKKMNVGRSAIREALKVLDVLGMIDIRPGQGTYISSA EADFFIIPLSWSLFLNGSQVEDILTVRNLLEVKAAELAAGSAKSAGIRKLEEISELIRRA YEDQNQKEFLEYDIEFHTCIAECSGSRVILSMIQTISNLMRHISGTGMADEAQLKAIYEE HRNVYRFILAHDSSGAAKAMGEHLEQSVTRYNYR >gi|224461045|gb|GG657759.1| GENE 2605 2738637 - 2740307 2147 556 aa, chain + ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 4 548 2 530 531 127 20.0 8e-29 MGFSVEELLQAEELKDVKLISGERGLDREIKGVTIIEAPDIVKFIDGGEVLLTGLYAFRS CTVEEFKVYINELTRKSVSALILKRGRKVENADTKIHLLLEFSETHGIPILEVPFEFSFR DIMSLIMEHLFNEEVTRLKYFKTTYDNFAALALTPDSKGKGIENILDVLAKLIRNPVAVF NQNMSCLASTDGAGGELKIRKDAVPFEPGTYSNYTYLKQNGEVSQCVIQVKMSFREKIYL VVSEVNQPFNTMDSIAAESAITALRFEFSRQYAVTELEKKFQNDIMHNILNGKVHSIGEL QKNTGLLGVEIDGCYRVIVFGMKNESSAKGDFKARVKDTNVLSTAIFAHISDAKIHNDLD KIVVIQKVQKDQTQEEYRREIKEVAEQVQAEVSAYNKYLKVKAGVGRLVEGIINLPESFK EAKEAFMFVDVAGEVSEDGNSRAMLFSDLGIFKLLCQLDDSSMMLEYVPEGLQKLYNYKK PQRDDLIITLKTYLDRNQNLSKTAQDLYVHYKTAAYRIEKITKITGIDFDNANEVLAVRI GLVVYKMIENYNKDFI >gi|224461045|gb|GG657759.1| GENE 2606 2740534 - 2741781 1240 415 aa, chain + ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 1 408 5 412 414 269 37.0 8e-72 MDINLERVLSRLEELYQCGAQDDGTYTRMAYSPGDLKGRETFAGYFRKLGLEPVMDSAGN LKFRLEGENPKLPAIVTGSHLDTVPDGGKYDGVLGCVAGLEICETLLKSGRRLKHPLEVV VFTDEEGFRFGSGLLGSGAMCGEELHISEADEDMNGQTRGEVMKAYGLHVADVPKAKRAR DSIHCFLELHVEQGASLYKNGTPVGVVSSIAGVSRYEITVKGEANHAGSTVMADRRDALV AAAGFISAVPRIVEEYGSAYTVATVGTMKVVPNSVNVIPGTCTFNLEIRDQDKEMIELIE RKLEEQLGRICKEMGETYTFERFSYHEPAPMAEWVKESIEKSVQELDIPYAVIPSGAFHD SLIMTARFPTGMIFVPSVDGISHSRYEYTEKEDIRQGLRVLLETILKVDDMNVTC >gi|224461045|gb|GG657759.1| GENE 2607 2741816 - 2742976 1238 386 aa, chain + ## HITS:1 COG:mlr1283_1 KEGG:ns NR:ns ## COG: mlr1283_1 COG0665 # Protein_GI_number: 13471340 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Mesorhizobium loti # 3 371 8 374 411 127 28.0 4e-29 MDKKKIGIIGGGISGTCLGYHLSLYDNAEVVVFEKDTIGGASTAKSAGTVCLFDDSLRNR YWDVRLYGFESYLKMEEEEKGSAGFDKTGTLVVATDEKVEATIKTGIALAKAAGYTGEYI TDKDRIKEILPDISTENILGAGYTQDDGYFDGTMISNTYAKKMQKNGGTIKTGVKVTEVK VENNKIKGLRTSDGEDYEFDCVVDCTGPWSKFTGEMVGMDVPIWHTKAEAFFLCPPGKKL GYTFPVLKYPAFYALRAGDNIFICKSHLSMDLNNPMHAGQWDPDKLPATGGTDDYFIDFL LDQLECRVPGIVDSGLVSSWLSYRAEPKDFLPILGETPVEGYVLATGYGGNGVIEAPAAS RDLAKFIMRGEKTPLLEDWAFERLLK >gi|224461045|gb|GG657759.1| GENE 2608 2743002 - 2743796 959 264 aa, chain + ## HITS:1 COG:SSO2817_1 KEGG:ns NR:ns ## COG: SSO2817_1 COG2086 # Protein_GI_number: 15899533 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Sulfolobus solfataricus # 1 247 4 248 286 165 39.0 7e-41 MNIAVLIKQVPVSNDVSVDPETHALVRASSEGMINPADLNAIEAAMVLKEQTEGKVVVFT MGPPDAEKALRDAMALGCDESCLITDRCLAGGDTVATAKVLAKSLEKYGTFDLILSGALS ADGATGQVGAMVAEYMGIPHVSEIQGLTYDESTAGTILAVKKFQGMELKIKAALPALMSV CFGCNEPRLATLRSKRAAKSKPLEVYTNAELGMAAGETGLEGSPTVVIDSFEPESTRKAQ MLTGTPDELARKLKELIEIEKGKE >gi|224461045|gb|GG657759.1| GENE 2609 2743797 - 2744780 1230 327 aa, chain + ## HITS:1 COG:CAC2543_2 KEGG:ns NR:ns ## COG: CAC2543_2 COG2025 # Protein_GI_number: 15895805 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 4 321 12 322 332 191 34.0 1e-48 MANGICVFAENYNGNIEPVVAELVSAAHFIKKTTGEKIQAVVAARDCEQLAAQLEQSGVD EIYAVKTDRDCTFQDDALSQVLAEMIKRIDPASVLVPATPMGRSVFSRVAARLGCGLTAD CTELLVDKREDGSFYIKQNKPSFGENVFVTIVTKEGCYPQMMTVRPGVYTPYEAAPDAEV KVEYFDDIVLPESKIEIVEALPASSDTDSILAAEVVVVGGRGAESEENFELLKRFAGKLE AAIGGTRPLADTGMIPFEHQIGQTGFTIRPRICISLGVSGAIQHTEGIKDTKLFVAVNED ENAPIFNVSDYGIIGDMKEVLQRYLEL >gi|224461045|gb|GG657759.1| GENE 2610 2744924 - 2745442 635 172 aa, chain + ## HITS:1 COG:CAC3555 KEGG:ns NR:ns ## COG: CAC3555 COG0778 # Protein_GI_number: 15896791 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 3 168 1 167 174 120 36.0 1e-27 MDLLEVMRKRRSIRNYTDEPVREEDLQKIIQAGLLSESGKAKRPWQFIVVRNKEVLEYLS RCREGGVKMLKEAQCAIVVTGDAEAQDVWVEDCSVAMANMHLMASSLGVGSCWIQGRLRK ADEKTTEEYVREKLKFPENYKLEAILSLGMPAVKMPAYDLEELDMDKVRIVE >gi|224461045|gb|GG657759.1| GENE 2611 2745688 - 2745798 65 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRPGDFLLLGMFIILSDEQAGLSGVQGCGSAFGGR >gi|224461045|gb|GG657759.1| GENE 2612 2746192 - 2747079 589 295 aa, chain - ## HITS:1 COG:CAC2730 KEGG:ns NR:ns ## COG: CAC2730 COG0642 # Protein_GI_number: 15895987 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 12 295 6 301 303 138 28.0 1e-32 MAILLCALTGMLIITVILLFIKIRILQKSAGEISKALADRLETETNTLIDLSSRDPYMSA LAETINVQLRKLREERQRFQQGDRNIKEAITNISHDIRTPLTAICGYLELLEREEMSEEV RRCLCIIQDRADVLNRLAEELFCYSVTTSAPFQQKREAVSLNSILAESISAYYAVLKGSR ITPDIHLPESAVMRSLDKNALYRIFGNIIGNAVKYSDGDLTIKLDENGGIVFSNHAPKLN ELQAGRLLDRYYTVEAASRSTGLGLSIAKTLTEQMGGSIRTSYAAGTLSILLHFP >gi|224461045|gb|GG657759.1| GENE 2613 2747090 - 2747923 538 277 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_3947 NR:ns ## KEGG: Dhaf_3947 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 1 277 1 277 277 144 36.0 6e-33 MNRLLNANFTRLKKNKVFWGGMIFMAAYGVFIMFGNYMDSKRYGDPIPVDSVFFSYTIMI GIVSAVFCCLFLGTEYSEGTIRNKLMIGHTRGRIYAANLLVCIAAGIFMTLSFIAAAGAV GFPLLGFFKSELRIVLAVLLGSLVMVTALSSVFTFLSMMIQNKAAAAVTVLLTIFILLFA AIYMNSRLSSPEMYEGYTYIDESGNMVEQEAQPNQAYVSGTTRKVYKALMDILPTGQSLQ YASMSGAHLWQMPVYSVIITIAASGAGIIVFRRKDIK >gi|224461045|gb|GG657759.1| GENE 2614 2747916 - 2748830 688 304 aa, chain - ## HITS:1 COG:CAC2734 KEGG:ns NR:ns ## COG: CAC2734 COG1131 # Protein_GI_number: 15895991 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 1 300 1 299 301 251 42.0 2e-66 MDYVLTTDSLCKHYRHFKALDHLTMHVPKGSIYGFIGKNGAGKTTLIRLICGLQHCTAGG YRLYGTDNTDKAVFRSRRRIGAVIETPSIYSDMTAEDNLQEQYRTLGLPSFDDIPALLKL VGLEGTGRKKAKNFSLGMRQRLGIAVALAGSPDFLVLDEPVNGLDPQGIIEMRELILKLN REHQITVLISSHMLDELSRLATHYGFIDRGRMVKEMSARELDAACRKCTRFKVTDITALT RVAERMHMEYQILSDSCADIFSTVDITAFVLALAKENCRTVSVSQHDETLESYYVSLLGG EGNE >gi|224461045|gb|GG657759.1| GENE 2615 2748920 - 2749600 472 226 aa, chain - ## HITS:1 COG:CAC2735 KEGG:ns NR:ns ## COG: CAC2735 COG0745 # Protein_GI_number: 15895992 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 6 226 1 225 225 175 43.0 7e-44 MEETAIKKILIIDDDMYIGNMLDELLTREGYFTGRAYSGTEALLLLSREKPDLILLDLML PGLSGEEILPELEGIPVIIMSAKTSVDDKVTLLLGGAADYITKPFDTKELLARIAVQLRS TAVTSAAHSLVFDDITVDTASHTVHVHGLPVRMTRTEYAILKLLMQNPSQVCTKSVILEH ISEDTPDCTESSLKVHVSNMRKKLQDAGRKDYIESVWGIGFKMKEN >gi|224461045|gb|GG657759.1| GENE 2616 2749779 - 2750276 620 165 aa, chain + ## HITS:1 COG:MTH1443 KEGG:ns NR:ns ## COG: MTH1443 COG0440 # Protein_GI_number: 15679440 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Methanothermobacter thermautotrophicus # 4 157 10 164 168 142 50.0 3e-34 MQRVYSLLVDNNPGVLSRIAGLFSRRGYSIDSITAGVTADPRFTRITIVASGDELILSQI EKQVRKLEDVIEIKVLKPEDSVYRELIMVKILANPAQRAEIVSLADIFRAKIVDVEKESL MVELTGTQSKLEAFLNLLDGYEILELARTGITGLSRGIKDVTIIE >gi|224461045|gb|GG657759.1| GENE 2617 2750347 - 2751360 1245 337 aa, chain + ## HITS:1 COG:all2315 KEGG:ns NR:ns ## COG: all2315 COG0059 # Protein_GI_number: 17229807 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Nostoc sp. PCC 7120 # 3 328 2 327 331 422 65.0 1e-118 MSAKIYYQEDCNLSLLEGKTIAVIGYGSQGHAHALNLKESGCNVIIGLYEGSRSWAKAES QGFEVFTAAEAAKKADIIMILINDEKQAAMYKKDIEPNLEEGNMLMFAHGFAIHFGQIVA PKNVDVTMIAPKGPGHTVRSEYQAGKGVPCLVAVEQDASGKALDKALAYALGIGGARAGV LETTFRTETETDLFGEQAVLCGGVCALMQAGFETLCEAGYDARNAYFECIHEMKLIVDLI YQSGFEGMRYSISNTAEYGDYITGPKIITEDTKKAMKKILSDIQDGTFAKDWLTENSCGA PHFRAMRKLAAEHPSEKIGAEIRKLYSWSDEDKLINN >gi|224461045|gb|GG657759.1| GENE 2618 2751534 - 2752175 664 213 aa, chain + ## HITS:1 COG:no KEGG:Rumal_0148 NR:ns ## KEGG: Rumal_0148 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: Pyrimidine metabolism [PATH:ral00240]; Metabolic pathways [PATH:ral01100] # 1 213 1 209 209 203 43.0 4e-51 MDVKLQDLRSERNPKARIKIMHGHFARSHSHVNTYIDISTVKCRCNNARETARVLAEPYL SSTQIDTIVCLDGMETVGAFLAELLMEPGNISVNGGKNISVVAPEMNQLGQMMFRDNTKR MIGGAHVLILAGSVNTGRTMMQAIDTVVYYGGNVCGVCAVFSAASKVAGIDIHAIFTTRE IPGYQVYPGHDCPLCRQGVKVDAIVNSYGYSGL >gi|224461045|gb|GG657759.1| GENE 2619 2752231 - 2752872 878 213 aa, chain + ## HITS:1 COG:no KEGG:Rumal_0148 NR:ns ## KEGG: Rumal_0148 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: Pyrimidine metabolism [PATH:ral00240]; Metabolic pathways [PATH:ral01100] # 1 213 1 209 209 203 43.0 3e-51 MDSRFTDLRSARNPKARIKIMKGHFATSNSHLNTYIDMSTVKTRHNNSREAAKELANEYL TNTMVNTIVCLDETEVIGTFMAEHLADSSNLSLSAGNNISVITPEFDTLGQIMFRDNKQR MIQNQQVIILAASVTTGKTIHRAIDSILYYGGTVCGICSIFSAVSKIAGMEIKTIFTSKD LPDYRAYDAGDCPLCREGKRVEALVNSYGYSKL >gi|224461045|gb|GG657759.1| GENE 2620 2753025 - 2753312 264 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|160880450|ref|YP_001559418.1| ribosomal protein S20 [Clostridium phytofermentans ISDg] # 9 95 1 87 87 106 66 6e-21 MKILEVDELANIKSAKKRILVNETKAARNKSIKSKVKTCVKKVETAVANKDAAVAADALK TAIREINKAGSKGVYHKNTCARKISRLTKAVNEIA >gi|224461045|gb|GG657759.1| GENE 2621 2753471 - 2754424 1249 317 aa, chain + ## HITS:1 COG:no KEGG:Closa_0874 NR:ns ## KEGG: Closa_0874 # Name: not_defined # Def: spore protease (EC:3.4.24.78) # Organism: C.saccharolyticum # Pathway: not_defined # 1 316 1 319 325 330 53.0 5e-89 MIEKYSIRTDLALEQKERFESDNVEVQGVVLEESYDEEREIRITTVKIETEKGAKTMGKP VGTYITMEAPNMAVPDEGYHEEVSKELMKFLQRFLDKDKKDYSVLVVGLGNRMVTPDALG PYVADNLNITRHIVKEYGKYAMGEEEVHLVSSIVPGVMAQTGMETVEIIRGVVKETEPDI IIAVDALAARSSKRLNRTIQIADTGINPGSGVGNHRNAITEETVGVPVIAIGVPTVVDAA TIVNDTMENLIAALETSETLRGVGVVMQGYNAAEKYELVKELISPHLNGMFVTPKDIDET VKRISFTISEALNMLFA >gi|224461045|gb|GG657759.1| GENE 2622 2754591 - 2755754 1294 387 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1620 NR:ns ## KEGG: EUBREC_1620 # Name: not_defined # Def: stage II sporulation protein P # Organism: E.rectale # Pathway: not_defined # 85 385 59 364 365 278 50.0 4e-73 MIIAVPVCILAVYAGMHTHVDPAGKVKYELSEMLMEEAQQIYLPGFAYTQGSRGSSFRDW LTTAAMNMMPLGTYVEGKSDIHTDVEDKKTYEMILAQQANDENAVDENGRLIQNDEKDAQ NEEAVQTSGTKIDTSMEKLKSFEYLVGNFYVIDGGTMTSADELNAEKLMAKDMKIDQKSD GPKVLIYHTHSQEAFADSKDGDTSTTIMGMGDYLSKLLSDKYGIQTMHHEGVYDLVDGKL DRSKAYQLAEPEIQKILEDNPSIEVVIDLHRDGVAEGTHLVTEVNGKPTAQIMFFNGLSR TKANGNIDYLKNPYIEDNLAFSLQMQISAANKYPGFTRRIYLRGYRYNMHLKPKTLLIEA GAQTNTVEEMRNAMEVLADTLDNVLTK >gi|224461045|gb|GG657759.1| GENE 2623 2755934 - 2757856 1992 640 aa, chain + ## HITS:1 COG:BS_gyrB KEGG:ns NR:ns ## COG: BS_gyrB COG0187 # Protein_GI_number: 16077074 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Bacillus subtilis # 3 633 4 630 638 602 51.0 1e-172 MAKKNTYDADSISILEGLEAVRKRPGMYIGSVSTKGLNHLIYEIVDNAVDEHLAGCCDEI RVTLEKDGSATVSDNGRGVPVGLHAKGVSAERIVYTTLHAGGKFDDSSYKTSGGLHGVGS SVVNALSAYMDVQVSREGYIHHDRYERGKPVIELEDGLLPKTGKTKKTGTKINFLPDDTI FEKTRFRADEVKSRMHETAYLNPTLTIIFEDLRGETPERIVYHEPDGILGFIKELNQKNE AVHEPVYFKGVAEGIEVEAAFQYVNEFHENVLGFCNNIYNAEGGTHLTGFKTTFTTVMNQ YARELGILKEKDANFTGADIRNGMTAIVSIKHPDPRFEGQTKTKLDNPDAAKAVSKVTND EITRYFDRNLDNLKKVIACAEKAAKIRKTEEKAKTNLLTKQKYSFDSNGKLANCESRDAS RCEIFIVEGDSAGGSAKTARDRMFQAILPIRGKILNVEKASIDKILANAEIKTMINAFGC GFSEGYGNDFDISGLRYDKIIIMADADVDGAHISTLLLTLFYRFMPELIYEGHVYVAMPP LYKAIPKKGEEEYLYDDKALERYRRKHDGPFTLQRYKGLGEMDAQQLWETTLNPETRLLK RIEIEDARMASGVTEMLMGTEVPPRRTFIYENATEAELDI >gi|224461045|gb|GG657759.1| GENE 2624 2757872 - 2760112 2622 746 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 1 706 2 696 830 534 42.0 1e-151 MQDSQIIRTEYSDLMKKSYIDYAMSVIVARALPDVRDGLKPVQRRTLYDMHELGIRYDRP YRKCARIVGDTMGKYHPHGDSSIYDALVVMAQEFKKGMILVDGHGNFGSIEGDGAAAMRY TEARLAKLTQDAYLSDLDKDIVDFVPNFDETEKEPEVLPVRVPNLLINGAEGIAVGMATS IPPHNLGEVVDAVKAYMKNDEISTKQLMRYMKGPDFPTGGIVVNKDDLPDIYESGAGKIK IRGKVETEDMKGGKKRLVVTEIPYTMIGAGIGKFLNDVCALVESKKTNDIVDISNQSSKE GIRIVIELKKGADAENLTNMLYKKTRLEDTFGVNMLAVADGRPETMGLKQIIEHHVDFQF ELATRKYKNLLAKELDKKEIQEGLIKACDVIDLIIEILRGSQSVKDAKACLTKGVTENIK FKTSISKKMAAMLRFTERQASAILEMRLYKLIGLEIEALQKEHEETLEHIASYEDILNNY DSMSEVIMEDLDRIKKEYGRSRRTAVENAEAAVFEENKIEEQEVVFLMDRFGYAKTVDTA VYERNKEAADAENRYVLSCMNTGKICLFTNTGKMHQIKVLDLPYGKFRDKGQPIDNVSNY DSTQETIVYLCDAQQMQIARLLFVTKTGMVKKVDGSEFQVAKRTIAATKLQEEDELISVQ VINDSQNIVLQTADGYFLRFPAGEVSEKKKGAIGVRGIRLHKNDEVEHAYLFEEGTETKV VYKEKEVTLNRLKSGKRDTQGVKNRG >gi|224461045|gb|GG657759.1| GENE 2625 2760290 - 2760757 626 155 aa, chain + ## HITS:1 COG:lin1358 KEGG:ns NR:ns ## COG: lin1358 COG0779 # Protein_GI_number: 16800426 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 9 155 6 155 155 118 43.0 4e-27 MSKREIYEQKTEEILLPIVEEYGFELVDVEYVKEGSTWYLRAYIDKPGGINIDDCEKVSR RLSDILDEKDYIDDAYIMEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRMMDKQKEFFGI LKEYDDSTVTIMQEDETLKTFAKSDIALIRLAFDF >gi|224461045|gb|GG657759.1| GENE 2626 2760778 - 2761971 749 397 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 373 9 375 537 293 42 3e-77 MNTELLEALNILEKEKDISKETLLDAIENSLLNACKNHFGKADNIKVIMDRETCDYKVFA EKTAVEEVEDDLEQISLEDAREIDSTFELGDIVQIPIESKSFGRIATQNAKNLILQKIRE EERKVVYDQYFEKEKDIVTGIVQRYVGKNISINLGKADAMLTENEQVKGEVFKPTERIKL YVVEVKNTTKGPKILVSRTHPELVKRLFESEVTEVKDGTVEIKSIAREAGSRTKIAVWSN DPDVDPVGACVGMNGARVNTIVNELRGEKIDIINWSDNPAILIENALSPAKVISVMADPD EKAASVIVPDYQLSLAIGKEGQNARLAARLTGYKIDIKSETQAIESGELPENYMELSEGV YEEEMYEDDFDGEYTEEYPEDYDDGAAEDIDVTDTEE >gi|224461045|gb|GG657759.1| GENE 2627 2761981 - 2762259 205 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein [Dictyoglomus thermophilum H-6-12] # 1 86 1 86 98 83 39 4e-14 MSSSKKVPMRKCVGCQEMKSKKEMIRVIRTEEGDFLLDATGKKNGRGAYVCPTRACLDKA VKNKGLERSFKQSIPGKVYETLEKEMGSLESK >gi|224461045|gb|GG657759.1| GENE 2628 2762246 - 2762569 319 107 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240146074|ref|ZP_04744675.1| ribosomal protein L7Ae/L30e/S12e/Gadd45 [Roseburia intestinalis L1-82] # 1 99 1 99 110 127 61 2e-27 MSQNKILSLIGLATKAGKTASGEFCTEKEVKSGRAALVIVAGDASDNTKKKFQNMCDFYE VPIYFYKDKDTLGHAMGKEFRASLAVLDEGFAKGIRKHMDTEDNTIA >gi|224461045|gb|GG657759.1| GENE 2629 2762584 - 2765421 2600 945 aa, chain + ## HITS:1 COG:lin1362 KEGG:ns NR:ns ## COG: lin1362 COG0532 # Protein_GI_number: 16800430 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Listeria innocua # 224 945 52 781 782 660 51.0 0 MSKIKVYELAKELDVHSKDIIEFLGKKNIEVKSHMSTLEDTDADMVKKSMGKAAVPDKAE AGDKEAAAPKKKNIVHVFRPQNTQNAGKHGNRQGARQGQQGQQPQGKPMQVNNGRPARQT QSARPTQGQDRPQNARPAQSQDRPQNARPVQGQDRPQGSRPAQSQDRPQNTRPAYHQDRP QGARQAQSQDRPQGSRPAQSQDRPQGARPSYNQDRPQNGRPAQGADRNGNRGERQGNRPQ NGRPQGTRPQNGRPSYNQDRPQGSRTGRPQGGDRPAYQNDRNQSRRPGERYDRPNDKKNT SVPSPALEGQKPQRSKGKGKDDYKKKDYRRDEDDRNKGKKQKTDVKKDIQKPQQKAVKVE EEIKAITIPEVLTIKELADKMKIVPSVIVKKLFLQGKIVTVNQEIDYATAEEIALEFDVL CEKEEQIDVIEELLKEEDEDEKKMKKRPPVVCVMGHVDHGKTSLLDAIRHTNVIDREAGG ITQHIGAYVVEVNGERITFLDTPGHEAFTAMRMRGASSTDIAILVVAADDGVMPQTVEAI NHAKAAGIEIVVAVNKIDKPSANIDRVKQELAEYELIPEDWGGSTIFVPVSAKSGEGLEE LMEMITLTAEVMELKANANRRARGLIIEAELDKGKGPVATVLVQKGTLRVGDSIAAGSAY GKVRAMMDDKGRRVKEAGPSVPVEILGLNDVPNAGEVFVGCANDKEARSFAETFISQGKV KLLDETKAKLSLDDLFTQIKEGNLKELGIVVKADVQGSVEALKQSLLKLSNEEVVVKIIH GGVGAINESDVSLASASNAIIIGFNVRPDATAKETAEREGVDLRLYRVIYNAIEDVEAAM KGLLDPVFEEKVLGHAEVRQTFKASGIGTIAGSYVLDGTFERDCSVRITRDGIVIFDGPL ASLKRFKDDVKEVRAGYECGFVFQNFNDIKEGDLVEAFKMVEIPR >gi|224461045|gb|GG657759.1| GENE 2630 2765456 - 2765836 482 126 aa, chain + ## HITS:1 COG:CAC1803 KEGG:ns NR:ns ## COG: CAC1803 COG0858 # Protein_GI_number: 15895079 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Clostridium acetobutylicum # 10 121 8 119 121 83 41.0 1e-16 MKKRSIKNTRVNTEVQRELSSIIRGGIKDPRVAPWTSVVAAEVAPDLKTCKAYISVLGDE EAQKETIKGLQSAEGYIRRELARNLNMRNTPEIKFILDQSIEYGVNMSKKIEEVTKTTVK DEADAE >gi|224461045|gb|GG657759.1| GENE 2631 2765826 - 2766791 911 321 aa, chain + ## HITS:1 COG:FN1011 KEGG:ns NR:ns ## COG: FN1011 COG0618 # Protein_GI_number: 19704346 # Func_class: R General function prediction only # Function: Exopolyphosphatase-related proteins # Organism: Fusobacterium nucleatum # 6 309 15 321 321 153 33.0 3e-37 MLNKLLAQADSIAIGGHVRPDGDCVGSCMGLYQYIREVWKEKAVDVYLEDIPDVHKFIEA TKDIRHEIVQGKTYDLFICLDCGDADRLGFSLPLFRSARKTFCVDHHVSNREFADVNYIF PDASSTSELVYDLTDKDKISTRTAEALYLGIVHDTGVFQYSCASPSTFEAAAELLRKGID GPKIIEDTFYEKTYAQNQVLGRALLESILLLEGRCIASYLTKKQMEFYGVTAKDLDGIVS QLRVTKGVEAALFLYELEPNVYKVSLRSGDMVDVSRVAQYFGGGGHKKAAGFSMTGTHRD VMSNVIKQIALQLPDTEEKES >gi|224461045|gb|GG657759.1| GENE 2632 2766799 - 2767716 708 305 aa, chain + ## HITS:1 COG:CAC1805 KEGG:ns NR:ns ## COG: CAC1805 COG0130 # Protein_GI_number: 15895081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Clostridium acetobutylicum # 4 299 3 288 289 231 41.0 2e-60 MIHGVINVYKEKGFTSHDVVAKLRGITRQKKIGHTGTLDPDAEGVLPVCMGKATRLCDML TDKDKTYEAVLLLGTETDTQDTSGVILAGKDTSHLTEETVRRAVLSFTGEYEQTPPMYSA VKVNGRKLYELAREGKVVERSARKVRIHEIRILAVDLPRVRMEIHCSKGTYIRTLCHDIG QSLGCGGCMEQLFRTRAGRFEIAESLRLSEIEKKRDDGTLMEAVVPVDEMFPDYRKIVAD EKQEPLAYNGNTFPHRVSQETGGGLADGEKVRVYDREGNFIAVYEYRSAEDNFRVKKMFF DRNSK >gi|224461045|gb|GG657759.1| GENE 2633 2767727 - 2768656 338 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 17 304 19 312 317 134 32 2e-29 MQYIKGLEAYEADGRSAVTLGKFDGLHLGHKKLTDMVKEYGRQDDIKSIVCAFDMSVLWE KKGISREVLMTKDERKNHLEEEVDCLVDCPFTEEFSRMEAEEFIENVICNIFRAAYVVVG TDFRFGHGKRGDIHMLQAYARKYDYELIVIEKERREGHIISSTYIKQILKEGNMPFVCEL LGYPYGLQGVVEHGKKLGRRLGFPTFNVAPAREKVMPPNGVYLNRVQVDGVWYDGIANIG VKPTVSDEERLLVESYLFDYSGDAYGKEVQIELLEFCRPEQKFADVEEMKKCVAGDIAFG RQYFEMAAD >gi|224461045|gb|GG657759.1| GENE 2634 2768674 - 2770326 2150 550 aa, chain + ## HITS:1 COG:BH1407 KEGG:ns NR:ns ## COG: BH1407 COG1283 # Protein_GI_number: 15613970 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Bacillus halodurans # 4 537 7 539 543 307 35.0 3e-83 MSITTFFLLLGGLGLFLFGMKLMSEGLEKAAGAKMRGILEFFTKNRFIGMLVGILFTAVV QSSSATTVMVVSFVNSGLMNLLQASGVILGANIGTTVTGQLIAFNLSDIAPLFVIVGVVM VMFCKKLNIKRAGEVILGFGILFMGLSIMGDAMSSLRESPHIVELLKSLKNPFAAILTGF VITAVLQSSSATVGIVILMASQGLLAFAICPFLILGCNIGSCVSALIASLGGKKDAKRAA MIHFLFNVIGSAVILIVLLVGVTPITDALFRLSGGNAARAVANTHTLIKIFEVILLFPFM NWVVKATYKIVPGKDATSEDGFELQFIGEGSIVSPATAVVDGIREIEHMGKIAIANLKTG MDALCSLNEEEINLVYSREKYIDFLNKKITDYLVRVNEIELPLADAKLIGGLFHVVNDIE RIGDHAENFVDSAKMRIADRVEFSDKAKKQLHDMTAMVTEILEYSLDMFTNRNQEHMQEI LDLEDEIDDREKKLQRSHVKRLTKNKCTPEAGMIFSDTISGLERVADHATNIAFAILEPE DNEEDDEEEE >gi|224461045|gb|GG657759.1| GENE 2635 2770471 - 2770737 362 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238924297|ref|YP_002937813.1| ribosomal protein S15 [Eubacterium rectale ATCC 33656] # 1 88 1 88 88 144 79 2e-32 MVSKEQKEQIIAEYGRGEGDTGSPEVQIAILTARINDLTDHFKANPKDHHSRRGLLKMVG QRRGLLAYLKNKDITRYRSLIERLGLRK >gi|224461045|gb|GG657759.1| GENE 2636 2770953 - 2771426 597 157 aa, chain + ## HITS:1 COG:TM1424 KEGG:ns NR:ns ## COG: TM1424 COG1905 # Protein_GI_number: 15644175 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Thermotoga maritima # 4 155 5 155 164 142 44.0 2e-34 MLEQSYYDKADEVIASHGCGHASLIPIIQDIQSEYRYLPPELLSYVAGKLGITEAKAYSV ATFYENFSFEPKGKYVIKVCDGTACHVRKSIPILERLYSELGLSKEKVTTDDMLFTLETV SCLGACGLAPVLTVNDKVYPAMTPDAAAELIHELRGA >gi|224461045|gb|GG657759.1| GENE 2637 2771429 - 2773315 1824 628 aa, chain + ## HITS:1 COG:TM0010_1 KEGG:ns NR:ns ## COG: TM0010_1 COG1894 # Protein_GI_number: 15642785 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Thermotoga maritima # 28 558 8 527 527 602 56.0 1e-172 MQRIENIEKLELVRGNAKKAIEQSRCRILICAGTGCLAGGSGEIYEKMRRLTEECPDVEV EFAPEAAHGESGVGVKKSGCHGFCEMGPLMRIEPMGILYTKVSVDDCEAIFERTIKKGDI IRHLLYKQDGIEYQRQEEIPFYKRQTRLVLENCGHIDAEHIEEYIAHGGYKALGKVLFEM KPEEVVQEVLDSNLRGRGGGGFQTGYKWSQVARQPETTRYVVCNGDEGDPGAFMDRSIME GDPHKMIEGMMIAAYAVGAQEGYIYVRAEYPLAISRLKLAIRQAQERGLLGDDILGSGFS FRLHINRGAGAFVCGEGSALTASIEGNRGMPRVKPPRTVEQGLFAKPTVLNNVETFANVP MIISRGADWYKTIGPENSPGTKAFALTGSVKNTGLIEVPMGTTLREVIYDIGGGIKGDGE FKAVQIGGPSGGCLITQHLDISLDFDSLKKMGAMIGSGGLVVMDDHTCMVEVARFFMNFT QNESCGKCVPCREGTKRMLEILERIVQGNGREEDLDTLDELARTITETALCGLGKSAALP VMSTLKLFREEYMEHVVEKKCVSHTCTALRRFVISPERCRGCSKCARNCPAGAISGKIKE PYVIDDTRCIKCGACESACAFGAIHIEA >gi|224461045|gb|GG657759.1| GENE 2638 2773328 - 2775010 1683 560 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 209 557 2 357 372 289 45.0 1e-77 MKYMTINNRKVAFEDEKNVLSVIRKSGIDLPTFCYHSELSTYGACRMCVVEDDRGRVFAS CSETPREGMVIYTNTPRLQHHRKMILELLLASHCRDCTTCRKNGVCTLQKLAQQLGVSYV RFENNKPQLPLDESSDCIVRDPNKCILCGDCVRTCDEIQGLGVLDFAFRGARMQVMPAFN KDLAKTDCVGCGQCRAVCPTGAITIKQNIRPVWEAVADPDTRVVVQIAPAVRVAVGDKFG IPKGENSLGKLAAALRRMGFDEIYDTNFGADLTVMEESEELLERLDSGENLPLFTSCCPG WVKFCENKYPDLREHISTCRSPQQMFGAVLKEEARMDKEDKRKTVVVSIMPCTAKKAEIH RPEHRTDGEQDVDYVLTTTEVTRMIKEAGIDLAQMPSEALDMPFGLSSGAGAIFGVTGGV TEAVLRRLAGSSRQEELENISFTGVRGIDGIKEASVRLGEREVKIAVVNGLKCADEVMSR IRSGETYYDFVEVMACKRGCITGGGQPVPIGARTKKARLEALYKIDTVAQIKRSNENPII QTLYSGLLRGKEHKLLHNEK >gi|224461045|gb|GG657759.1| GENE 2639 2775241 - 2777328 1388 695 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 4 693 6 694 714 539 43 1e-151 MYKKFEMELAGRKLRVDVDRVAKQANGAVLMHYGDTTVLCTATASEKPREGIDFFPLSVE YNERLYSVGKIPGGFNKREGKASENAVLTCRVIDRPMRPLFPKDYRNDVTLENLVMSVDQ DCSPELTAMLGAAIATTISDIPFDGPISATQVGLVDNTLVFNPTAAQKEASDMALTVAST RDKVIMIEAGANEVPEDKMIEAIFAAHELNQKVIAFIDTIVAECGKQKHTYESCAVPEEL FAAIRELVPPQEMEEAVFTDDKQTREENIRVITARLEEAFAEKEEWLEVLSEAVYQYQKK TVRKMILKDHKRPDGRAVDQIRALAAEIDLIPRVHGSAMFTRGQTQICTVTTLAPLAEAQ RLDGLDEAETSKRYMHHYNFPSYSVGETRPSRGPGRREIGHGALAERALIPVLPSETEFP YAIRTVSETFESNGSTSQASICASSMSLMAAGVPIKAAVAGISAGLVTGDTDDDYLVLTD IQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTRPIIEEAIATTKKARTFILDEVMNK TIAEPRPEVGAYAPKIIQMQIDPQKIGDVVGQRGKTINAIIEQTGVKIDITDDGAVSICG VEADSMAEAKRLIEIIVADFEAGQILEGKVVSIKEFGAFLEFAPGKEGMVHISKISKERI NHVEDVLTLGDVVTVVCLGKDKMGRISFSMKDVAK >gi|224461045|gb|GG657759.1| GENE 2640 2777433 - 2778338 1160 301 aa, chain + ## HITS:1 COG:CAC1605 KEGG:ns NR:ns ## COG: CAC1605 COG1893 # Protein_GI_number: 15894883 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Clostridium acetobutylicum # 3 295 7 301 301 150 30.0 3e-36 MKVYIIGMGALGVMYADHIKEHGGDVAFVMDRERLARYEGRPVICNGREQTFAMLDAAEA APADLVITAVKYSGLKPAIQTMRHCVGADTILMSVMNGISSEDIIAETYGSGRMVYTVAQ GMDAMKAGNVLKYTQMGELCIGRKEPAQKSNVERVAAYFDSIGMPYTVDEDIMHRIWGKF MLNVGVNQTCMAYGTTYEGVLLPGEPHDIMLEAMHEVIAAANAEGIALGEEDVDFYVGLL GKLDPNGYPSMAQDRVARRYSEVEMFAGTVIPICEKHKIPAPANRKLYEMVKAIEKEYGQ G >gi|224461045|gb|GG657759.1| GENE 2641 2778545 - 2779078 327 177 aa, chain + ## HITS:1 COG:BH1944 KEGG:ns NR:ns ## COG: BH1944 COG0745 # Protein_GI_number: 15614507 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 1 175 49 227 229 180 51.0 9e-46 MDLMILDVMMPHLDGFSVCKLAREMSNMPIIMLTAKGGEDDKLKGYEYGADDYMTKPFSP KVLLAKANALLRRSSPAPLDALNVGKIMVIPSSHKVFIDGQEITLTHKEYELLYFLMVNP GQIFARDQLLNRIWGYDFEGTTRTVDTHIKTLRQKLGDEGKHIVTLIRSGYKFEVAV >gi|224461045|gb|GG657759.1| GENE 2642 2779075 - 2780151 567 358 aa, chain + ## HITS:1 COG:CAC2434 KEGG:ns NR:ns ## COG: CAC2434 COG0642 # Protein_GI_number: 15895699 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 45 354 179 489 492 211 37.0 2e-54 MKLDDNFTFRTVRKKILIISKLAGILLILSYILSTKLEIDPDVSFAVWFAFVIAIVLVVD FLMGHFISKPISKLNQTARKMAKLDFSDPCTITTNDEFGEMAVSLSTMAENLQQALTGLE AANTRLEQDVEQERRLLAERKELVDNLSHEMKTPLGVIRAYAEGLQDEADEAKKQKYSAI IIAETERMSNLITTLLDLSALETGACRLVPERFDFVEFLETVAGRLLIDTPDANFTLQYE LPDKRAYVDVDKARMEQVLDNLLVNAKKNVQPGGILKLSLKEQMGTLYFSVYNQGPTIPQ ENLPKIWTKFYRDVNSQYSGSGLGLAIVAQILSMQNLSYGVENLSDGVQFYFSIPTVK >gi|224461045|gb|GG657759.1| GENE 2643 2780325 - 2780480 128 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|167757751|ref|ZP_02429878.1| ## NR: gi|167757751|ref|ZP_02429878.1| hypothetical protein CLOSCI_00082 [Clostridium scindens ATCC 35704] hypothetical protein CLOSCI_00082 [Clostridium scindens ATCC 35704] # 3 51 2 50 50 64 79.0 3e-09 MEFLGLTWYWWLVIVVVLVISIPFKIRFMKWWSKRQHHKKKDRHGKWGDDE >gi|224461045|gb|GG657759.1| GENE 2644 2780477 - 2781325 205 282 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 228 1 235 245 83 25 4e-14 MIEVKDLTFSYGKDKQALHGLNFTVEDGEIFGFLGPNGSGKSTTQKILTGILKGHGGKVS LFGQDISAAHTQEFFQKIGVLFEFPYLYANLSAIDNLKYFSSFYPKGQLRDIQEVLDELE FKPDFLKKPVSSYSKGMRQRASMARALISNPKLLFLDEPTSGLDPSGAVLFRKIIEAERK KGTTVFLTTHNMLDADLLCDRVAFISNGRIMALDTPKNLKEQNSNHRVVIDYLYQGKREE KTIEAPELEAGIPYAHDEIISIHSQEPTLEDMFIKYTGRGLS >gi|224461045|gb|GG657759.1| GENE 2645 2781454 - 2782320 412 288 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_3060 NR:ns ## KEGG: CDR20291_3060 # Name: not_defined # Def: putative ABC transporter permease # Organism: C.difficile_R20291 # Pathway: not_defined # 1 288 44 342 342 277 45.0 4e-73 MDAGLYNVYLYDPAGTQTTVSSLVQRVSSKEALDTILLDDTNGVGIDASTGEPQLVFYEG TENADHHRVDYALSLLQPSGNHSAEVIGSNTPEQKARKEITCELLFFEIAAVGFLGIAAV LFKEKGMGVIRVHAIMPLRKNLFILSKLAIFLLSDLLFAILLTMLNVGLSDTVSILPAVL LQTALLSLFMALTGLTCTLLLKDFRQFTLAYLLIAIFVSTPVFLSANTSVKLDWIGFHPF YHIYMGLKNAYFGTPTAGPLYYLGYAGAIAALFVAVQFVFQREIGKEG >gi|224461045|gb|GG657759.1| GENE 2646 2782323 - 2783333 286 336 aa, chain + ## HITS:1 COG:no KEGG:CD3199 NR:ns ## KEGG: CD3199 # Name: not_defined # Def: putative ABC transporter permease # Organism: C.difficile # Pathway: not_defined # 1 333 1 332 337 335 50.0 1e-90 MKGLRYQLKSVLKDKFCLMSFLLPIIVAVALTFVGSIDLSSLGELHFGVLENNLSAQTVT WLERYGPVTTYSTPEELMDAINEPSTNLIGVEIDGDSIKTILSGDELDVFRQTADTLPAL YEQRGMARQVKVQIMEHPNMMTGFQDMFAAITLIVAMFMGCTFNAMNIVSEKEDGVAFIN EILPMTHSRYIMQKLIIGFLCGCLSSIITACICFQLSLHNTALMLVLIVLSAFVAALIGL YIGRFSEGLMVSVVYLKIVMLLFMAVPILSFLLGSGNSLLSAICYLVPSQATFEGIMSLS GGSSATITKDILILTAHCAAWFLLYIALSVRRRRKA >gi|224461045|gb|GG657759.1| GENE 2647 2783375 - 2783530 64 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570616|ref|ZP_03779641.1| ## NR: gi|225570616|ref|ZP_03779641.1| hypothetical protein CLOHYLEM_06718 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06718 [Clostridium hylemonae DSM 15053] # 1 51 1 51 51 96 100.0 6e-19 MLDKKSDYALNASLRPGNGTPGRDRGNLPEINFSAEGVVKNSQYGIVIYME >gi|224461045|gb|GG657759.1| GENE 2648 2783575 - 2784207 631 210 aa, chain + ## HITS:1 COG:lin2076 KEGG:ns NR:ns ## COG: lin2076 COG1309 # Protein_GI_number: 16801142 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 10 114 2 105 206 67 38.0 2e-11 MNEKFYTLPEEKQQKIINAAMEVFSQNEYKRASTDLIAAKAGVSKGLLFYYFHNKKELYL FLYDYVIEVMKEQVVDEKFYEITDFFELLSYCAGKKVKVLSRNPYITDFAMRAFYSEKEA VSEDLKQINVSRTEELYEMYFKSIDAYKFREGANPYMVMKMLLWMSDGYLHDLQMSGKPI DVDVLMEEFDRWMTMFRKLVYKEEYQNGRD >gi|224461045|gb|GG657759.1| GENE 2649 2784194 - 2785090 1126 298 aa, chain + ## HITS:1 COG:TM1028 KEGG:ns NR:ns ## COG: TM1028 COG1131 # Protein_GI_number: 15643786 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Thermotoga maritima # 1 297 1 293 293 223 42.0 3e-58 MGVIEIDNITKDYGKGRGVFDVSFSVEKGEVLGFLGPNGAGKTTTIRQLMGFIRPDRGSL SIQGMDCFKEADRIQKSVGYLPGEIAFIDSMNGMEFIKFVAQMKKMKGLGRAHELMELFE LNASGKLKKMSKGMKQKIGIVCAFMDTGADILILDEPTSGLDPLMQNRFVELILTEKKQG RTILMSSHMFEEVERTCDRAAIIRDGRLVAVEEMEKLREGRQKTVEVTFQEASMAEEFAA GFPKAAYQAGERTVTLRVGRNLDFFVKKAGAYTVTDLNVRTQSLEEFFLHFYGEGAEK >gi|224461045|gb|GG657759.1| GENE 2650 2785090 - 2785887 945 265 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1635 NR:ns ## KEGG: Cphy_1635 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 265 5 266 266 229 46.0 6e-59 MNITLLKKELKSNWLLLVIFLAVLSMYGSMITMMFDPKMGDGLRAMADSMPGMFAAFGMT NVGTTLLDFVSSYLYGILYVAFPGVFIIILSNRLAARYVDNGSMAYLLAAPVKRWKIMLT QALFLLLCLVIMVGFATGLILVFSEALFPGEMDIKAFLRLNAGLLGLLVFFGGAGICASC FCNESKNASAVSTTVVVYSILLQMISRVGDKFEHLKYATPLTLFDTDGLGAGDHEAWIMC AVLYAAGIILMGVGIVRFSKRDLPL >gi|224461045|gb|GG657759.1| GENE 2651 2785964 - 2787142 898 392 aa, chain - ## HITS:1 COG:CAC3027 KEGG:ns NR:ns ## COG: CAC3027 COG1408 # Protein_GI_number: 15896279 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 63 391 83 390 392 180 32.0 4e-45 MIAVFLAPVYILLNIYVFRWLIRWMGACTRHFRKRPVRAVVLVVYSFFALSILISFFWPV RWLKTLTNIWFGTVCYILLTVAFADLIRLFLKYVIKADQNKLSSRRTFVTAGTLCIAVIL SVSAYGVLNGKHIRTTSYDVAIDKDAGAISSMKVVLTADLHLGYNTGNHEMEQMVKKINA QNPDLVVIAGDFFDNDFDALKDPEQIASTLQKIKSTYGVYACYGNHDVQEKILAGFTFNH DEKKVSDPRMDQFLEDSGITLLRDEGVLIEDSFYLYGRADEERPGRGIDKRRSAEELTED MDMRKPVLVIDHEPKELDELAGAGVDLDLCGHTHDGQMFPGNLTIKLLWENPYGYLKKGN MHNIVTSGVGVFGPNMRVGTKSEICVINVTFR >gi|224461045|gb|GG657759.1| GENE 2652 2787290 - 2788240 936 316 aa, chain + ## HITS:1 COG:CAC2093 KEGG:ns NR:ns ## COG: CAC2093 COG3854 # Protein_GI_number: 15895363 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 300 1 295 305 262 44.0 6e-70 MQRDRILKVLPVKVRRLIEEEQLQYDYLQEIRLRTGKPLLMIYRGDELITGPGRGGPYII TKEDIREMVGYISNYSLYAYEQEMKQGFITIEGGHRVGMTGQAIIEDGKVKNIKYISSVN LRIAHEVLGCADEIFPYVALNRKLCHTLIISPPRCGKTTLLRDMIRQISDGNAWVKGMSV GVVDERSEIGGCYMGVAQNHLGMRTDVLDCCPKAEGMIMLIRSMSPEVVAVDEIGAAEDV HAVEYAMHCGCKLLASIHGASMEEIRKKPLLGRLVQEKRFERYIVLGSRIHPGQIEGIYD DRGTLLYAEQPAGQGV >gi|224461045|gb|GG657759.1| GENE 2653 2788247 - 2788642 400 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570622|ref|ZP_03779647.1| ## NR: gi|225570622|ref|ZP_03779647.1| hypothetical protein CLOHYLEM_06724 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06724 [Clostridium hylemonae DSM 15053] # 1 130 1 130 130 231 100.0 2e-59 MMKIAGALLLTAGTTLMGMRAASGIQDEYRQIQYLQQIMYLLLSEIRYSRAYLGEAFLHI GGQVREPYSKWLAQMSRRMDSRDEGIFSDIWENSAEEYLADSGLPGEEISRLKALGTRLG AADMDMQLKTF >gi|224461045|gb|GG657759.1| GENE 2654 2788875 - 2789069 298 64 aa, chain + ## HITS:1 COG:no KEGG:Closa_3250 NR:ns ## KEGG: Closa_3250 # Name: not_defined # Def: stage III sporulation protein AC # Organism: C.saccharolyticum # Pathway: not_defined # 1 64 1 64 64 87 87.0 2e-16 MSVNLIFKIAAVGILVSVLSQVLKHSGREEQAFLTSLAGLLLVLFWIVPYIYELFESIKK LFSL >gi|224461045|gb|GG657759.1| GENE 2655 2789090 - 2789476 575 128 aa, chain + ## HITS:1 COG:no KEGG:Closa_3249 NR:ns ## KEGG: Closa_3249 # Name: not_defined # Def: stage III sporulation protein AD # Organism: C.saccharolyticum # Pathway: not_defined # 1 128 1 128 128 109 53.0 3e-23 MSMVQIGIIGVVGALLAVQFKSGKSEYGIYISVVLSLFIFFCIITRLNIIVDMMRTIGSY INMDTAYIGTLIKMLGITYVAEFSSGICKDAGYQTIAVQIEIFGKLAVLVLSMPVLMALL ETIKEFLS >gi|224461045|gb|GG657759.1| GENE 2656 2789473 - 2790699 1547 408 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2520 NR:ns ## KEGG: Cphy_2520 # Name: not_defined # Def: sporulation stage III, protein AE # Organism: C.phytofermentans # Pathway: not_defined # 66 405 36 376 380 231 39.0 4e-59 MKKCIYVMAAVLLLAVTGLAGAAGVKEVQAHDSRKEQQNSAQENSGESDGKEQEDPGVIE NKIISQFDFDDIDDSLKDLFPGEKLDFKETLMAVITGDMSLSADLLNRLVSDQLTYVVRS NKSNLIHILLIAVIAAVFTNFSNVFQNRQISQVSFYMLYLLLIALCLNSFEIVIDWVEGG IQNLTSFMGVFCPLYFLAVAIAKGSVTSIAFFNLVLFLIYLVEMLIVNFLLPAVHIYIMV KIINYLSSEDYLSKLAELMQVVIVWTLKTLLACIIGLNVIQGLISPAIDTVKRSVVTRGA EAIPGIGDAIGGVTEVVLGTAVLVKNGIGMTGAVICVALCVVPLVQTGIVVIMYKLVAAL IQPVSDKRIVGCVESVGDGCQILMRVIFTVGLLFLLTIAIVSAVTSGV >gi|224461045|gb|GG657759.1| GENE 2657 2790709 - 2791068 449 119 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570628|ref|ZP_03779651.1| ## NR: gi|225570628|ref|ZP_03779651.1| hypothetical protein CLOHYLEM_06728 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06728 [Clostridium hylemonae DSM 15053] # 1 119 1 119 119 223 100.0 4e-57 MFQYLYDWIRNIAFYMVLVMAAIQVLPNTDYKKYIRFFTGLVLILMLAAPILKIFGMDKK LTDVYNNETYKGEIERIEDSTKYLEDVDVSDYLGTPEDEENEGEAGKGAVEVEEIHVGR >gi|224461045|gb|GG657759.1| GENE 2658 2791058 - 2791660 563 200 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2518 NR:ns ## KEGG: Cphy_2518 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 18 198 49 236 239 112 36.0 8e-24 MEDRKKWTLKLKELIPGGKLKKDQILIILLAGILLLVIAIPSGSGSRDKGSAKSGGAGAS AGSSEADQNSYAREMESHLEEVLSQMAGVGDVTVMITLKSSSEKVVEKDVEGESESVTES DSQGGSRTTQNSSRGETTVYDGNSSQEGAPYISKEISPQVEGVVVLASGGNNAVVVQNIT EAVQALFGVDTHKIKIMKKN >gi|224461045|gb|GG657759.1| GENE 2659 2791689 - 2792327 762 212 aa, chain + ## HITS:1 COG:no KEGG:Closa_3245 NR:ns ## KEGG: Closa_3245 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 205 21 256 262 129 41.0 1e-28 MKRIFRKNQVIIAALAVMIAAAGYLNYSGRLFNDKDKTTETSGELANKELLDISDDDLAS ASGDIQSQDSDSESKDGNVDGTPGEAVLTNGEASAVVAEAKVTREQVRAKNKESLMEIID NDKLSDEQKKDAVNQMVQMTDLAEKEAAAETLLASKGFNEAVVSLTAESADVVVNAEELS DANRAQIEDIVSRKTGIDAQNIVITPVRSDGK >gi|224461045|gb|GG657759.1| GENE 2660 2792532 - 2794133 1796 533 aa, chain + ## HITS:1 COG:CAC0630 KEGG:ns NR:ns ## COG: CAC0630 COG4108 # Protein_GI_number: 15893918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Clostridium acetobutylicum # 6 533 2 526 526 747 69.0 0 MSQMSNDIKNEIKKRRTFAIISHPDAGKTTLTEKFLLYGGAINTAGSVKGKATSKHAVSD WMEIEKERGISVTSSVLQFNYDGYCINILDTPGHQDFSEDTYRTLMAADSAVMVIDASKG VEAQTRKLFKVCTMRHIPIFTFINKMDREAMDTFELLDDIEHELGIATCPVNWPIGSGKN FKGVYDRREKEVELFSDTKKGTTQGEVRKVKFNDPEIAWLIDDSQRVQLEEEIELQDGAG AEFDQELVSRGELSPVFFGSALTNFGVETFLQHFLKMTSSPLPRKADKGEIDPMEEPDFS AFVFKIQANMNKAHRDRIAFMRICSGEFEAGMEVYHMQGGRKVRLSQPQQMMASERKIID KAYGGDIIGVFDPGIFSIGDTLTTSGERFAYEGIPTFAPEHFARVRQVDTMKRKQFIKGI SQIAQEGAIQIFQEYNTGMEEIIVGVVGVLQFDVLKYRLENEYNVEIRMDSLPYEYIRWI ENEDVDLAKLVGTSDMKKVKDLRDRPLLLFVNEWSIRMTQERNEGLVLSEFGR >gi|224461045|gb|GG657759.1| GENE 2661 2794234 - 2794617 606 127 aa, chain + ## HITS:1 COG:BS_yqhY KEGG:ns NR:ns ## COG: BS_yqhY COG1302 # Protein_GI_number: 16079489 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 14 127 13 126 135 76 36.0 1e-14 MGKEERNAYTINADENLGEVKIADEVVAIIAGLAAMEVEGVSSMAGNATRELIGKLGMKS LSKGVKVDVLEGIVTVSLALNLKYGYSVKDVTGKVQDKVKTAIENMTGLDVADVNIRVAG VQVPEEA >gi|224461045|gb|GG657759.1| GENE 2662 2794633 - 2795016 469 127 aa, chain + ## HITS:1 COG:TM1765 KEGG:ns NR:ns ## COG: TM1765 COG0781 # Protein_GI_number: 15644510 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Thermotoga maritima # 1 127 8 132 142 82 38.0 2e-16 MREHIFKMVFCMEFCGEEELPEQLALYEEQLDSAGEEDLKYISGKSRNIAAKTEEIDRLI NEHVTGWKTGRMNKVDLTILRLAVYEMNWDEDVPTGVAIDEAVELAKKYSGEEGPAFVNG VLAKLAE >gi|224461045|gb|GG657759.1| GENE 2663 2795034 - 2796242 1115 402 aa, chain + ## HITS:1 COG:BH2783 KEGG:ns NR:ns ## COG: BH2783 COG1570 # Protein_GI_number: 15615346 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Bacillus halodurans # 4 402 7 452 458 315 41.0 9e-86 MRNVYTVRQVNAYIKNMFTQDYMLGRIYVKGEVSNCKYHTSGHIYFSLKDESGTIACVMF AGQRGGLSFRMGEGQQVIVMGSVNVYERSGSYQLYAKEIRLDGEGVLYEKFQMLKRELEE MGMFAPEYKKPLPPYAQRIGIVTAPTGAAVRDIMNIARRRNPYVQLILYPAQVQGEGAKE SIVRGIQMLERAGVDVMIVGRGGGSIEDLWAFNEEEVARAIFDCSVPVISAVGHETDTTI ADYVADLRAPTPSAAAELAVYDIQKLNGELNEAGMRLSRLMRQKLQMERMRLREYETKLK YLHPVNKLREQQQRLVDMEDRLRGLMEGRLTAARHRLAVYVEKMKGLSPVGKLNQGYSYV QGKDGKTVKSIRDVKENDRLSVYVTDGIVYAAVAGVKEEEHG >gi|224461045|gb|GG657759.1| GENE 2664 2796235 - 2796459 398 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570635|ref|ZP_03779658.1| ## NR: gi|225570635|ref|ZP_03779658.1| hypothetical protein CLOHYLEM_06735 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06735 [Clostridium hylemonae DSM 15053] # 1 74 1 74 74 107 100.0 4e-22 MASEVKETKEQSLNEIFGQLEEVIKGLEAEDVSLEDSFRLYHSGIDMLRKCSDKVDRIEK QMLVLDEEGETHEF >gi|224461045|gb|GG657759.1| GENE 2665 2796449 - 2797351 1161 300 aa, chain + ## HITS:1 COG:CAC2080 KEGG:ns NR:ns ## COG: CAC2080 COG0142 # Protein_GI_number: 15895350 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Clostridium acetobutylicum # 16 300 8 289 289 223 40.0 3e-58 MNSKNDFDIQCSRKVQEIETVLQDYLPRQKGYQSIIMEAMSYSLLAGGKRLRPMLMKETY DLFNGRSKALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGILAGDA LLNYAFETAFKAFVTEPEDSLLIGRALGVLGEKAGIYGMIGGQVIDVRETGRDISKEVLD TIYELKTAALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDVVSSSEVLG KPVHSDEKNKKTTYVTLLGIEEAARTVEELSQKAVSLLHQLPGRNAYLEQLLMQLIHRDK >gi|224461045|gb|GG657759.1| GENE 2666 2797367 - 2799241 2319 624 aa, chain + ## HITS:1 COG:CAC2077 KEGG:ns NR:ns ## COG: CAC2077 COG1154 # Protein_GI_number: 15895347 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 1 614 4 616 619 655 52.0 0 MLERIQKENDIKKLDIDELYELSGEIRRFLIEKISKTGGHLASNLGVVELTMAMHLMFEL PKDKIIWDVGHQSYTHKLLTGRKAGFDELRKYGGMSGFPKRKESACDAFDTGHSSTSISA GLGYVEARDIRGEDYSVISVIGDGSLTGGMAYEALNNASYLKTNFIIVLNDNHMSISENV GGMSKYLAKLRTADFYTGLKRGITNTLHKVPVVGDSAIEKIRRTKSSIKQLIVPGMFFED MGITYLGPVPGHNLPLLCKAFQEAGKIGGPVLLHVLTEKGKGYEPAEAFPEKFHGIGPFD IETGEPVSKKEKDTYTDVFGKVLCDIALHDPDVAAITAAMADGTGLDRFRRMFRKRFFDV GIAEAHGVTFAAGLAAGGVKPVFAVYSSFLQRAYDQIIHDVALQNLPVVFAVDRAGLVGN DGETHQGIFDLSYLSSIPNMVVMSPKHKWELADMLRFAVAYNGPVAVRYPRGTAYDGYEA FRAPVEYGRSEMIYEEEDIAILSVGHMFEEAAGVWETLKEQGFSCTLVNARFVKPLDEEM VEALGKKHRMIVTMEENVQSGGFGEHVLEFVSRKKLPVTVLTIALPDDYVEHGNIDVLRK ETGIDRISVAERIMKAYTGVVESI >gi|224461045|gb|GG657759.1| GENE 2667 2799238 - 2800047 857 269 aa, chain + ## HITS:1 COG:CAC2076 KEGG:ns NR:ns ## COG: CAC2076 COG1189 # Protein_GI_number: 15895346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Clostridium acetobutylicum # 2 242 5 245 267 308 63.0 9e-84 MKERLDILLVKRNLAASREKAKAVIMSGNVFVEGQREDKAGTTFPEEAKIEVRGSTLPYV SRGGLKLEKALKSFDVSVDGKVCTDVGSSTGGFTDCMLQNGAVKVFAIDVGRGQLDWKLR QDDRVVCMEKTNIRYVTPEDIGEPVEFSSIDVSFISLTKVLEPIRNYLADHGQIVALIKP QFEAGREKVGKKGVVREPRTHVEVISKVIRYAMSIGFAVLNLEFSPIKGPEGNIEYLVQL EKCGETNRISDMIDIEKTVGQAFGMLSKG >gi|224461045|gb|GG657759.1| GENE 2668 2800064 - 2800903 1002 279 aa, chain + ## HITS:1 COG:CAC2075 KEGG:ns NR:ns ## COG: CAC2075 COG0061 # Protein_GI_number: 15895345 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Clostridium acetobutylicum # 3 276 1 272 284 159 32.0 6e-39 MGMDRFYIVTNDGKDPEQQVTGKVKRLLENGGKTCILCEKDEQKVIIAESVPDDIDCAVV IGGDGSLIEVARLFRDRDVPVLGINMGTLGYLTEVELCHLDDAMQQILRGDYTKEDRMML EGIFEDGSSDVSLNDIVVSRKGELRVIHFKLYVNGELLNAYEADGVIISTPTGSTAYNLS AGGPIVEPTASMIVITPICSHALNTRSIVLSAEDEIVIEIGQGRHDTTEEVFVTFDGADT VNLKTGSTVTIRKSQAATKILKLSQVSFLETLRRKMKGN >gi|224461045|gb|GG657759.1| GENE 2669 2800908 - 2801357 598 149 aa, chain + ## HITS:1 COG:BS_ahrC KEGG:ns NR:ns ## COG: BS_ahrC COG1438 # Protein_GI_number: 16079481 # Func_class: K Transcription # Function: Arginine repressor # Organism: Bacillus subtilis # 2 148 3 149 149 119 42.0 2e-27 MKVNRHAKIIELINKYHIETQEELAEYLTNEGFKVTQATVSRDIRDLKLTKVPFENGKQR YAVHESEKSGMSEKYMRVLKDGYVSMDMAQNILVIKTVAGMAMAVCAAIDAMKWNEVVGS IAGDDTIMCAIRSVDDTVRVMDKISKIVL >gi|224461045|gb|GG657759.1| GENE 2670 2801366 - 2803039 1822 557 aa, chain + ## HITS:1 COG:BH2776 KEGG:ns NR:ns ## COG: BH2776 COG0497 # Protein_GI_number: 15615339 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Bacillus halodurans # 1 557 1 562 565 357 38.0 3e-98 MLQNLHVKNLALIDEIEVDFKEGLNILTGETGAGKSIILGSVSLALGGRYTKDIIRAGAD YGFVELTFVVENERQTEKLRALDIFPEDGAVVLSRRLMSGRSVSRINGETVQMGLLKEVS SILIDIHGQHEHQSLLYKKNHLEIVDAFAREYIEAVKEETAAAYRDYKSCRKELAEADMD EAQRAKELAFLKFEADEIEKAELKTGEDEELELLYRRMTNSRKIADGVAEAHAFTSEGEQ SASEALSRAIRALYEASEYDGRAAELYDQLVEVDSLLNDFNRELSDYSKSCEFSEEEFAA AEDRLNEINHLKQKYGNTIDEILAYADSQQEKIRRLEDHEQYIDTLKKACDKAEKKLKQQ SARLSRLRKEQAAILEKAIQEGLLELNFEDVNFEIHFEALADYTVQGTDDVEFMISLNPG QPVKPLVNVASGGELSRIMLAIKTVMADRDDIETLIFDEIDVGISGRTAQKVSEKMAVIG RKHQVICITHLAQIAAMADCHFVIEKTASKDSTKTDIRPLSEEESVNELARILGGARITD TVIKNAEEMRELAKQTK >gi|224461045|gb|GG657759.1| GENE 2671 2803188 - 2804252 983 354 aa, chain + ## HITS:1 COG:CAC2072 KEGG:ns NR:ns ## COG: CAC2072 COG0750 # Protein_GI_number: 15895342 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Clostridium acetobutylicum # 43 351 79 390 395 212 42.0 7e-55 MRRYWYKKILIIIVTFTVAVGGSYYLIEDQHSQLRQEVNASAESKRMVIPGGMPIGIYLE TEGVMVLGTDAVTSVDGMDYEPAAHLVKSGDYIVGLDDEEIRSKSELISAMKKLDEDEVV LKVRRTDKYINIKLKPVKCSARDYKLGIWVRDNAQGLGTITFLNTDSQFGALGHGIHDVD TNELLEIDDGTLYTTSIKDIQKGENGVPGGMEGIIIYNNYNVLGSIDKNTESGIFGRIER IDALFSDQTPIEVGNKDDIKEGDAVIRCSVDGKVKDYDIRITKIDKNAKEVNKGIVIEVT DPDLLKITGGIVQGMSGSPIIQDNKLIGAVTHVFVQDSTKGYGIFIENMLEHVE >gi|224461045|gb|GG657759.1| GENE 2672 2804371 - 2805162 797 263 aa, chain + ## HITS:1 COG:BS_spo0A_1 KEGG:ns NR:ns ## COG: BS_spo0A_1 COG0784 # Protein_GI_number: 16079478 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Bacillus subtilis # 1 121 1 120 120 103 40.0 5e-22 MGEINVAIADDNERILDLLGEIISNDKELTLVGKANNGEDMYELIRQKQPDVVLLDLIMP KMDGLSVMDLVNEDKEIKKHPDFIVVTAVGQERITEDAFKKGANYYIMKPFNNDMVLNRI KHANHIIRHEMKQMTPQETTLSRQPEVNLETRVTDMIHEIGIPAHIKGYHYLRDAIIMAV EDMDVLNAITKVLYPTVAKMHQTTASRVERAIRHAIEVAWSRGKLDTLDDLFGYTVSNGK GKPTNSEFIALIADTIRLEYKNR >gi|224461045|gb|GG657759.1| GENE 2673 2805227 - 2806669 1308 480 aa, chain + ## HITS:1 COG:CAC2239 KEGG:ns NR:ns ## COG: CAC2239 COG0297 # Protein_GI_number: 15895507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Clostridium acetobutylicum # 3 479 2 477 477 468 49.0 1e-131 MEKILFVASESVPFIKTGGLADVVGSLPKYFDKEKYDVRVMLPKYMCMKDEWKEKLTYCT HFYMDLNWRTQYVGILELEYDGITFYFIDNEYYFNGFAPYGDMYSDIEKFAFFSKAVLSA LPLIDFRPDILHCHDWQSGLVPVYLDNFRYGNEFYRGIKTIMTIHNLKFQGTWDTKRVMD ITGLPRYYFAPDKLEAYKDANYLKGGIVYADRITTVSSSYAEEIKTPFYGEKLDGLMNAR ANSLSGIVNGIDYEDYDPADDPHIEKNYTVDNFRKEKVKNKTALQKELGLEADHRVMMIG VVSRLTDQKGFDLISYVMDELCQDAVQLVVLGTGEEQYENMFRHYAWKYSDKVSANIFYS EPMSHKVYASCDAFLMPSLFEPCGLSQLMSLRYGTVPIVRETGGLKDTVEPYNEFEKTGT GFSFMNYNAHEMLGTVRYAERIYYDKKRDWNKIVERGMQKDFSWKNSAKQYEELYESILC >gi|224461045|gb|GG657759.1| GENE 2674 2806706 - 2807575 720 289 aa, chain + ## HITS:1 COG:aq_1429 KEGG:ns NR:ns ## COG: aq_1429 COG0685 # Protein_GI_number: 15606607 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Aquifex aeolicus # 1 285 1 289 296 232 40.0 6e-61 MKIKDILRDEEPHISFEVFPPKTDAGYESVLSATEKIAALKPSFISVTYGAGGGTSKNTV NIASHIQNDLGVVSLAHLTCASSTKEEVHQVIEKLKEKGIENVLGLRGDIPDDVQFPVSN QYKYAFELIRDIKSQGDFCVGAACYPEGHVETEHKKDDIENLKNKVECGVDFLTTQMFFD NNILYNFLYRIREKGITVPVLPGIMPVTNSKQMKRICSLSGTALPERFRAIVDRFGDDPK AMQQAGIAYATDQIIDLIANGINNIHIYSMNKPEVAGAIMKNLSDIVKV >gi|224461045|gb|GG657759.1| GENE 2675 2807629 - 2808237 647 202 aa, chain + ## HITS:1 COG:no KEGG:Ethha_1377 NR:ns ## KEGG: Ethha_1377 # Name: not_defined # Def: vitamin B12 dependent methionine synthase activation region # Organism: E.harbinense # Pathway: not_defined # 1 202 13 214 215 162 41.0 6e-39 MGYGKHAVDDSTLALIGEAFEELDRLAARRIVYRIFDLTVKEPDCIEIGKLCIRSRSLGR NMKGCEKAVLLGATLGIEIDMYMRKLSITNMAKAVVVQSCAAALLEEYLDGCQLAIEQEA GGQGLYLRPRFSPGYGDFSIEHQEEIVRMLDTAKTIGLSVTGSSMLTPSKSVTAVMGLSR TKEPCHRKGCEECGMTDCPYRR >gi|224461045|gb|GG657759.1| GENE 2676 2808265 - 2810649 2673 794 aa, chain + ## HITS:1 COG:TM0268_2 KEGG:ns NR:ns ## COG: TM0268_2 COG1410 # Protein_GI_number: 15643038 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Thermotoga maritima # 299 792 12 480 483 249 33.0 2e-65 MISQRLGRELLFFDGGMGTLLQSKGLKPGELPETWNLTHREEIIDIHRQYVEAGSDIVLT NTFGANALKFHDTEYDLEEIVTSAVGNVREAARTGVNDGRRVYTALDIGPTGKLLKPMGD LGFEEAYEAFKEVVRYGEAAGADLVHIETMSDTYEVKAAVLAVKENTDLPVFATMIFDER GKLLTGADVLSVVALLEGLRVDALGINCGMGPEQMMSILDEIMRYTSIPVVVKPNAGLPK QREGEVYYDVDPEHFAEAMCRIVKKGACVIGGCCGTTPAHIKAMTERCAGLVPAVPTSKK ETVVSSYGQGVVLGDRPVIIGERINPTGKSKFKQALKEHDLDYILREGITQQEKGAHILD VNVGLPDIDEVSMMREVVCELQSVTSLPLQIDTVDIEAMEAAMRIYNGKPMVNSVNGKKE SMDAVFPLIQKYGGVVIGLTIDENGIPDSADGRVKVAGNIIEEAAKYGIDRKDIVIDVLA MTISSEPEGAKVTLEALRKVRECYGVRTVLGVSNISFGLPFRPAVNANFYTMAMQSGLSA GIINPSSEDMMRSYYSFCALMNFDHNCEQYIAQYGSQTSAPVQMSEMTLKSAIEKGLKEE SYQAALRLVKEKAPLEIINEYLIPALDVVGKGFEKGTVFLPQLLMSADAAKLAFAVLKEE LARSGESAQKKEKVILATVKGDIHDIGKNIVKVLLENYSFDVIDLGKDVPPEEIVLRAVS EDVRLVGLSALMTTTVVSMERTIKLLRRDKPDCKVMVGGAVLNEEYAEMIGADFYGKDAM QSVYYAQKILQTAE >gi|224461045|gb|GG657759.1| GENE 2677 2810804 - 2811628 827 274 aa, chain + ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 156 274 79 195 450 71 37.0 2e-12 MMRGLDTTVRKLRRRVFEEVARLGFKANAETLNDDMEAIPYKMVNEDTAKYRESVYRARA VVRERLRLAMGLSLRPENKPVHLTAGVESSNISDKYYEPPLMQVIPSACEACEERGYEVS NMCKGCLAHPCMEVCPKDAVSMVKGRSYIDQEKCIKCGKCKSVCPYDAISRKERPCQKAC GVGAIESDNCGRARINNEKCVSCGMCMVSCPFGAISDKSQIFQLARALTEGDEIVAEIAP AFAGQFGDNITPRNLKAALQELGFSEVYEVALGA >gi|224461045|gb|GG657759.1| GENE 2678 2811731 - 2812378 761 215 aa, chain + ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 8 168 216 379 450 117 35.0 1e-26 MTTGELPFLLTSCCPSWAMLAKKYFPDLIDQVSQELTPMVATARTIKQEHPEARVVFVGP CAAKKLEAMRRTVRSDVDFVITFEELQAMFDAKEIDLTKYEAESSFHNATGAGRGYAVAG GVAEAIEKCVKEYYPGVEVSIEHAEGLAECKKTLALAKAGKMNGCLIEGMGCPGGCVAGA GTNIQVVKAQKKIKEFVAASSKQLPPKELEEIELK >gi|224461045|gb|GG657759.1| GENE 2679 2812569 - 2815208 2637 879 aa, chain + ## HITS:1 COG:CAC1678 KEGG:ns NR:ns ## COG: CAC1678 COG0013 # Protein_GI_number: 15894955 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 876 1 878 881 919 53.0 0 MQKYGVNELRKMFLEYFESKGHLIMKSFSLVPHNDKSLLLINSGMAPLKPYFTGQEIPPK KRVTTCQKCIRTGDIENVGKTARHGTFFEMLGNFSFGDYFKKESIRWTWEFLTDVVGLEP DRLYPSVYLDDDEAWEIWNKDIGIAPERIFRFGKEDNFWEHGSGPCGPCSEVYYDRGPKY GCGSPDCTVGCECDRYMEIWNNVFTQFDNDGNNNYTELEQKNIDTGMGLERLACVVQGVD SMFDIDTIKALRDHVCHITKTEYGQDDETDVSLRVITDHIRSVTFMISDGIMPSNEGRGY VLRRLLRRACRHGRLLGVEGEFLVELARTVIEGSRDGYPELEEKKDFIFKVIAKEEEQFN KTIDQGLSILAEMEAEMEKNGEKTLSGDHAFKLYDTYGFPLDLTKEILEEKGLSVDEEGF RASMEVQRRTAREAREVTNYMGADATVYESIAPEVTSEFVGYDNLSFESSVTVLTTETEI TDALSDGDRGTVFVEKTPLYATSGGQEADKGYIRTADGEFRVEDVVKLLGGKIGHVGYVT KGMIKTGDTVTLEVDEENRALSARNHSATHLLHKALRTVLGTHVEQAGSSVNAERLRFDF THFSALTKEELKKVEEIVNAQIMAALPVKVENLPIEEARKTGAAALFGEKYGDIVRVVSM GDFSVEFCGGTHVENTGVITAFKIISETGVAAGVRRIEALTSKGLLDYYDELEKRLAEAA KLVKASPDKLAEKITHLLAENKTLHSEVESLKSKLAQDAMGDVMDQVTEVKGVKLLATEV EGVDMNGLRDLGDQLKDKLGEGVIVIASAAGGKVNLMATATKGAIEKGAHAGNLIKAIAG LVGGGGGGRPNMAQAGGKNPDGISSAIAKAGEVLEEQLS >gi|224461045|gb|GG657759.1| GENE 2680 2815617 - 2816981 1564 454 aa, chain + ## HITS:1 COG:SA1270 KEGG:ns NR:ns ## COG: SA1270 COG0531 # Protein_GI_number: 15927018 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Staphylococcus aureus N315 # 1 440 1 438 440 271 41.0 2e-72 MEQKRELKKNLGVATAMALVVGCVIGSGVFFKPQAIYTATGGAPGLGMIAWVITGLASIA AALTFAEVAIMIPKTGGMVAYLEEIYNPVVGFLAGWVQTILFYPAMISALAVVCAQQAGL FIGEGFTVPLAIGIIILIIFLNNLGSKVGGSIQVVFTICKLIPLILLMIFGFVKGSGANP IFSPMVGDGLSPAVVLGQLMVAILFAFEGWTGVGAIAGEMKNPSRDLPIAIVGGVSVIMG VYFIINIAYLWVLPASELATLTAPASAVALKVFGDIGGKIISVGIMISVFGACNGFVLSG SRVAYSLAAEGNFPYSRNLAKLNNAQVPTNSIILVGGIGCIYAISGQFNLLTDLAVFSSW TFYTLTFIGVMKLRKDRPDAVRTYKVPLYPVVPIIAVVSGVYVIINQLFMSGLQSTVLSV GSIVIMLIGLPVYSVVMKNKEKKKTAANAEKILT >gi|224461045|gb|GG657759.1| GENE 2681 2817079 - 2817255 285 58 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227872333|ref|ZP_03990687.1| ribosomal protein S21 [Oribacterium sinus F0268] # 1 58 1 58 58 114 96 2e-23 MSNVIVKENETLDSALRRFKRNCAKAGIQQEIRKREHYEKPSVRRKKKSEAARKRKYN >gi|224461045|gb|GG657759.1| GENE 2682 2817354 - 2817947 609 197 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 16 166 7 157 270 114 37.0 1e-25 MWWNKVIFGWSAYHVVLWFLVYSILGWFVESVYMSLCNRKITNRGFARCPVCPIYGVGAL TVFFMLQPYSEHPVKLFFMGMLLATSIEFITAGIMNKIFGEIWWDYRRKPFNYKGIICLE SSIAWGFYTLALFAFLQNMIVDIVGVIPVMIGRIGGSILIIVYAVDFFITLYREKKEDIP ERLWQVKDRLLDKLSKE >gi|224461045|gb|GG657759.1| GENE 2683 2818095 - 2819330 1262 411 aa, chain + ## HITS:1 COG:MJ0721 KEGG:ns NR:ns ## COG: MJ0721 COG4992 # Protein_GI_number: 15668902 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Methanococcus jannaschii # 8 401 1 395 398 347 45.0 2e-95 MRLRETGLTAEELKAMTDKYMVETYPRYDFVAERAEGMYLYDEKGNAYLDFYGGVAVNSV GNRNHRVIEAVKEQADDIVHTFNYPYTVPQALLAKKICDTVGMDKIFYQNSGAEANECMI KMARKYGTDKYGKNRYHIITAKNGFHGRTYGAMSATGQPDSAVQEGFMPVVPGFSYAEFN NLEDFASKVTADTIAVMIEPVQGEGGVYPATREFMEGLRKLCDDKEMLLLLDEVQTGWGR TGAAMAYMGYGVMPDAVSMAKAMGGGVPIGACCARTEVAEALSAGSHGSTYGGNALACAA ALASVSEILDNNLSENARTVGKYLRKKLAELPHVKEVRGRGLLVGCEYDIPIAADVKWNA LKRRVLITAIGDSVNRMTPPLTAEKKHVDRLVAAMREAIEEAAEEQIVKAG >gi|224461045|gb|GG657759.1| GENE 2684 2819317 - 2819430 122 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGGIVFVILKFIMAVKGTIMASVTVGLNVNNIRISLL >gi|224461045|gb|GG657759.1| GENE 2685 2819476 - 2820057 563 193 aa, chain - ## HITS:1 COG:BH3033 KEGG:ns NR:ns ## COG: BH3033 COG0424 # Protein_GI_number: 15615595 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Bacillus halodurans # 4 190 5 186 190 164 49.0 1e-40 MKYILASASPRRKELLAQAGFAFDIIPADIEETISGGTPPEIVMNLARQKALHVCRTLSE DTCTVIGADTIVVYKDEILGKPSGRGEALDMLSLLSDRTHQVYTGVSLVTGSARTPAVHT FYEVTDVTFYPISRHDMQDYIATGDPFDKAGAYGIQGPFAIHVKCIKGDYNNVVGLPIAR LYHELDRSAFHGH >gi|224461045|gb|GG657759.1| GENE 2686 2820530 - 2821066 614 178 aa, chain + ## HITS:1 COG:PA1841 KEGG:ns NR:ns ## COG: PA1841 COG3760 # Protein_GI_number: 15597038 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 31 176 19 163 165 77 31.0 1e-14 MYISEITTTAPTDERMPLERKMYETLDKLKIPYERVDNDPAASMEECAAVDKAIGTEIRK NVFLCNQKKTTFFLLVMPADKAFDTASFSKKLGVSHMSFAPPEKMLEHLGTTPGSASVAG LLNDEDDYVQVIVDKEVAESEWFGCNPGINTSHLKFKTKDLLTKFLPHVHHRARIVEL >gi|224461045|gb|GG657759.1| GENE 2687 2821115 - 2822821 1800 568 aa, chain + ## HITS:1 COG:VCA0786 KEGG:ns NR:ns ## COG: VCA0786 COG3044 # Protein_GI_number: 15601541 # Func_class: R General function prediction only # Function: Predicted ATPase of the ABC class # Organism: Vibrio cholerae # 11 564 8 544 549 386 38.0 1e-107 MKSETELKQLLYSIDHKGYPAYKGTRGSYRFGSYELSIDHVQGDPFAALSKLSVKVAGRT AGFPGRLYDTKYKRIALQDYVTRQFAAQAGRYTFQAKGSGKSGIISVTRCGQEVLERTSC TIEERTGDVTVRFEVGFPANGRTINARELIKILYDYLPACVEKSMMYKELNAGKVEKVME LSVDREFIREELKRLDLAAFVANGSILPRESGVSQRPMKDAVAFVSPGSMEVTLELPYKG TLTGMGVKKGITLIVGGGYHGKSTLLKALEAGVYPHISGDGREYVVTDSTAVKLRAEDGR SIKHTDISMFINDLPNGKDTNAFYTEDASGSTSQAANVVESLEAGAKVFLIDEDTSATNF MVRDELMQQVIHRDMEPITPFIERVGDLYKTYGISTIIVAGSSGAYFQVADEIIQMDRYV PKEITEAAKAAAREYPSLELPGDKPEMPEFKRFVRSNPDLKQKGRIKIKTLGKDGVQLNH DTIDLRYVEQLADAEQLTCLGHIVKYMEEHMMDGRTTMQQLIEKLAAQMDSSGFKVICEE SYLPGNLAMPRKQEIYACLNRYRRLGTR >gi|224461045|gb|GG657759.1| GENE 2688 2822887 - 2824158 929 423 aa, chain - ## HITS:1 COG:BH1535 KEGG:ns NR:ns ## COG: BH1535 COG1686 # Protein_GI_number: 15614098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus halodurans # 66 415 31 377 387 277 45.0 3e-74 MKRFFALLICVFLCTQSVALAAPPDNTLLYEEDTGQEQEKNNEAGADDGTDAGSDSESGQ DAASGLTVSAPSAVLMEASTGQVIYEKDADEQRPPASVTKIMTLLLIFDALKDGKIKLDD SVSTSEFAASMGGSQVFLEPGETQTVDTMIKCIAVASANDACVAMAEYICGNEEEFVKNM NERAKGLGMTNTHFVNCNGLDTDGHLTTARDIALMSRELITTYPQIRDYSMIWMENITHT TNKGTTEFGLTNTNKLVRQYEYATGLKTGSTDKAKYCVSATAEKNGMELIAVIMAAPDHK ARFSDATTLLNYGFGKCNKYEEDKIASIKPVSLSRGVKKTVKAEQTEPFAYIDTTGADLN SIEKKKVMKKKLKAPIKKGTKIGEMKYYLAGKEIGSKDIVAGETVDEVSYQSALKDALND LLL >gi|224461045|gb|GG657759.1| GENE 2689 2824314 - 2826101 1696 595 aa, chain - ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 595 1 584 584 514 44.0 1e-145 MNIPERLTALRALMAEKGFDIYMVPTDDNHQSEYVGEHFKARAFITGFTGSAGTAVITQD EAGLWTDGRYFIQAARQLEGSGVKLFKMGEPGVPSVEEFITDMLPENGTLGFDGRVVAMG EGQALEAAVAPKNGTIDYSEDLIDKIWTDRPPLSEEPAFALGETYTGESTAEKLARIRGA MKAAGADIHVIAALDDVCWTTNLRGNDIEFFPLLLSYAVITMDEMKLYIDEKKLTGDMKA KLAADHISLHPYNAVYEDVKNFKDTDAILVDPSRLNYALYNNIPKGAKIIEQDNPTIVMK AMKNDTELKNIVNAHVKDGVAVTKFMYWLKQNVGETEITELSAADKLEEFRREQEGYLWQ SFEPICGFGEHGAIVHYTSTPETNVPLKEGSLFLTDTGGGYYEGSTDITRTFALGDVPEN MKEDFTAVLKCNLHLAAAVFLYGTTGYNLDVLARQPLWERGQNFNHGTGHGVGYLMNIHE APTGFRCAIREKEKHPLEPGMVITNEPGLYIEGSHGIRTENEMVVRKGDCTEYGQFLYFE PITYVPIDLDAVKPELLSQADKDQLNAYHAKVYDIVSPHLSEDEKEWLRRYTRAI >gi|224461045|gb|GG657759.1| GENE 2690 2826211 - 2827011 715 266 aa, chain + ## HITS:1 COG:FN1255 KEGG:ns NR:ns ## COG: FN1255 COG0647 # Protein_GI_number: 19704590 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 2 259 15 272 275 182 33.0 4e-46 MLKEKKYFLFDIDGTLAVDDVLFDGSRELIAHIASIGGRSFYITNNSTKSRKDYMEKFKR WGIQTDEDQFITASYAACRYLKEQYHGRKLFVMGTPSFVEEVKSCGFEVTEQAEKDVACV VVGFDRTLCYDKVEAACELLFRPEVDYIGTNPDYRCPTSFGFVPDCGGICEMLNVTVDRT PRYAGKPDKGIVTMCMEQVGAKPEEVLVVGDRLYTDIACGIRAGVETALVFTGEAKEKDL AQTEFRPDHVYRDIRQLYEDFRGQGE >gi|224461045|gb|GG657759.1| GENE 2691 2827048 - 2827884 703 278 aa, chain + ## HITS:1 COG:CAC2775 KEGG:ns NR:ns ## COG: CAC2775 COG1408 # Protein_GI_number: 15896030 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 15 277 25 287 287 139 30.0 4e-33 MLCILVEIRREMRTFQMTRYTVRSRRLAGMKGTKKILFLSDLHNQTYGAQNSRLVSAVLR EDPDLILLGGDMLVGKRGHSYEPALQFIKQLAPICPVFYADGNHEQRVKKRPQEYGLDMD RYVQELGEAGVRFLSNESACMELGGIPVRIYGLEIPERCYGHFKRASMEAEEITQNIGRR GPDCYNILLAHNPGYADVYRAWGADLILSGHYHGGIVRIPGIGGLVAPGFFLFPKYSGGK YEEGDSTIVVSRGLGMHTLPVRLFNPAEVVVLKLKGQQ >gi|224461045|gb|GG657759.1| GENE 2692 2828020 - 2828763 982 247 aa, chain + ## HITS:1 COG:CAC2061 KEGG:ns NR:ns ## COG: CAC2061 COG1354 # Protein_GI_number: 15895331 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 243 1 242 249 146 40.0 3e-35 MGIPVKLQVFEGPLDLLLHLIDKNKIDIYDIPIVEITNQYMEYIRAMEKEDLNVMSEFLL MAATLLDIKCRMLLPKEVNEEGEEEDPRQELVEQLLEYKMYKYMSYELKDRQVDGEMVLY KNPTIPEEVLEYVEPVDMDALLGELTLVKLNRIFRDVMRRQVDKIDPVRSTFGKIEKEEV TLPEKLDHVTEYARIHKKFSFRELLEKQCSKVQLIVTFLAVLELMKVGTVFIEQEQQFDD IIITSML >gi|224461045|gb|GG657759.1| GENE 2693 2828784 - 2829362 641 192 aa, chain + ## HITS:1 COG:CAC2060 KEGG:ns NR:ns ## COG: CAC2060 COG1386 # Protein_GI_number: 15895330 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Clostridium acetobutylicum # 1 187 11 198 202 135 39.0 4e-32 MEEVEIRKLEGVIEAILFTMGESVELSKIASAIEHDEDTTRKIIRQMMVRYDEEDRGVRI IELESSFQMCTKKEMYEYLIKIAKQPRKFVLTDVLLETLSIVAYKQPVTKLEIEKIRGVK SDHAVNKLVEYNLVCEVGRLDAPGRPLLFGTTEEFLRRFSIQSVEELPSLNPEQMEDFKT EAEEEVQLKLDV >gi|224461045|gb|GG657759.1| GENE 2694 2829477 - 2830667 1183 396 aa, chain + ## HITS:1 COG:CAC2057 KEGG:ns NR:ns ## COG: CAC2057 COG1686 # Protein_GI_number: 15895327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 29 366 29 339 351 162 33.0 9e-40 MIMTIVFSAFPSTGTAAGDGDIPEELSQLYARSAVLMDADSGRVLFGKDEDVVRPMASTT KIMTCILALENMQEDQVTAASDHAASQPKVRLGVKGKEEFRIKDLLYSLMLESHNDSAVV IAEGIAGSVEAFAGMMNEKAAELGCSDTYFVTPNGLDGYDEGGTHSTTARDLAAIMKYCI KDSPKKEQFLEVTRTKDYSFTNVKGDRSFSCSNHNAFLTMMDGALSGKTGFTADAGYCYV GALERDGRTFIVALLACGWPNNKGYKWKDTRKLMEYGVANYEYQTVWQDMKLKDVNAERG IEKGNEFGGDAKIPVKIADADKEFKVLLREGEKVDITCDVKKKLAAPVEEGTKVGTVTYT LDGEVLRQFSVVTAQSAERKDAGWCAEILLKKLLMQ >gi|224461045|gb|GG657759.1| GENE 2695 2830789 - 2830878 135 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGNIIGWVIVAAAALYGIYIVISDRKKHF >gi|224461045|gb|GG657759.1| GENE 2696 2830972 - 2831838 922 288 aa, chain - ## HITS:1 COG:BH2117 KEGG:ns NR:ns ## COG: BH2117 COG0583 # Protein_GI_number: 15614680 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 1 280 1 281 290 174 35.0 2e-43 MDLKKCEVLLTAISLGSFTKAGEKLGYTQSGITQMMKSLENEVGFPLFYKGHKGVSLTPE GEALLPSIRALLFSNETVNQEISFLKGLKKGTLRIGTYVSCSIHWLPDIIRRFQADYPGI IFQIMEGSGGEIAKWLEDFTVDIGLTSFQKDKSYDFIHVEQDPLLAVLPVGHPYTKLEKV PIELFENQPFIIYDRVNDADIHPLLEKAGITPDIKFTGKNDYSIASMVEHGLGVSIMPRL FLSLYDGDYVTRPLVPNAYRNLGIALRSSKDLSPAMKLFLQYVKKNLI >gi|224461045|gb|GG657759.1| GENE 2697 2832023 - 2832511 618 162 aa, chain + ## HITS:1 COG:BS_ywhH KEGG:ns NR:ns ## COG: BS_ywhH COG2606 # Protein_GI_number: 16080800 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 156 1 157 157 162 54.0 2e-40 MSVEKVREYFRQYGMEERVKEVDESSATVESAAAALGCEPKRIAKTLSFRAGEAVLLIVT AGDRKIDNKKYKQRFGCKAQMLRAEEVEPLVGHGVGGVCPFGINDGIDVYMDVSLQRFET VFPAAGSGNSMIELGIDELERYGRSSGWVDVCREREEAAAEK >gi|224461045|gb|GG657759.1| GENE 2698 2832902 - 2833978 1449 358 aa, chain + ## HITS:1 COG:BH2383 KEGG:ns NR:ns ## COG: BH2383 COG0468 # Protein_GI_number: 15614946 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Bacillus halodurans # 5 346 3 343 349 449 65.0 1e-126 MVSDDKKKALDAAISKLEKDFGKGTVMKLGDPAAQVQVETVPTGSLSLDLALGLGGVPKG RVVEIYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAGNIGVDIDELYISQP DSGDQALEITETMVRSGAMDIVVVDSVAALVPRQEIEGDMGDSHVGLQARLMSQALRKLT PVISKSNCVVIFINQLREKVGIMFGNPETTTGGRALKFYASIRMDVRRIETLKQGGEMVG NRTRVKIVKNKIAPPFKEAEFDIMFGKGISREGDILDLAASINVINKSGAWYAYNGDKIG QGRENAKIYLAEHPDILEAVETKIRAHYHLGEDAQAAAEEAGEQEDKKKESKKKEEDK >gi|224461045|gb|GG657759.1| GENE 2699 2833981 - 2834595 687 204 aa, chain + ## HITS:1 COG:CAC2410 KEGG:ns NR:ns ## COG: CAC2410 COG2137 # Protein_GI_number: 15895676 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 198 5 207 214 61 24.0 9e-10 MTVTKIEPVTKTRYRIYVDGQFAFILYKGELSRYLIAEDAEITEETYETIRTEVILKRVK LKAMHLLSDMDRTEGQLRTKLRQGGYTEDMIDAAVDYVKSFGYIDDEAYVKRFIAGRKDK KSRREIYAALCRKGIPKEQIEAAMEDCYEKEDSCGAIRKILEKKKYDPATAKDEEKRRIM GFLTRRGFSYDDIRQVIQVSEWNA >gi|224461045|gb|GG657759.1| GENE 2700 2834668 - 2836221 1222 517 aa, chain + ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 6 517 7 514 514 526 61.0 1e-149 MPIGIVIAVAVVLVIITAAVSHFVTVSNLKKNAESKIGNAESKAREIIDDAVKTAEAKKK ESLLEIKEESIKNKNELEKETKERRAELQRYEKRVLSKEEALDKKSEAIEKRESGFAAKE EQLKQREAKVEELSKQRVQELERISGLTSEQAKEYLLKTVEEDVKHDTAKMIKELETQAK EEADKKAKEYVVTAIQRCAADHVAETTISVVQLPSDEMKGRIIGREGRNIRTLETLTGVE LIIDDTPEAVVLSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVETMIREEG EAAALEVGVHGIHPELIKLLGRMKFRTSYGQNALKHSIEVSQLSGLLAGEIGLDVRVAKR AGLLHDVGKSIDHDVEGSHIQIGVDLCRKYKESATVINAVEAHHGDVEPETLIACVVQAA DTISAARPGARRETIETYTNRLKQLEDITNQFKGVEKSFAIQAGREIRVMVVPEQVSDAD MVLMARDIAKQIEYELEYPGQIKVNVIRESRVTDYAK >gi|224461045|gb|GG657759.1| GENE 2701 2836358 - 2836489 211 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKEYQIADISSDCIKEINELQEKLRQQTEKDIVLIAYKPAEE >gi|224461045|gb|GG657759.1| GENE 2702 2836553 - 2836618 69 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQDFILKIKNVSKRMGSGDGK >gi|224461045|gb|GG657759.1| GENE 2703 2836852 - 2837907 840 351 aa, chain + ## HITS:1 COG:BS_ykgB KEGG:ns NR:ns ## COG: BS_ykgB COG2706 # Protein_GI_number: 16078366 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Bacillus subtilis # 29 342 7 338 349 127 28.0 4e-29 MEAVMEEDRKKICSNTDVIKKERLWQEVYAGTYTSEKSKGVYRFLFNRENAEMTEPELFY EAGNAKWVSLSGDMLAFPVEKEGRAGTCFVSLKDKAAKRVGEILEEKDTPCFILQDGEFT YTANYHDGTVMVYHMGKDGPVIAGRIENGREAGCHQVIVHGAYIMVPCLTQHVIRLFDRR NGFRTAGTIQFPDGSGPRHGVFDHSHSKLYVVSEWSNELFIFDVQDNTFLLRQQLSVLPA KTAGGENKQKASAAAVRLAEDERFLYISVRGLDLLTVVDVSGRKAAVLEHVSSGGEHPRD FVLTGEGGHLLVANRFSGGIVSMKRNRESGRITGIQSRISMPEGVSLVIRQ >gi|224461045|gb|GG657759.1| GENE 2704 2837934 - 2839349 1519 471 aa, chain + ## HITS:1 COG:STM2081 KEGG:ns NR:ns ## COG: STM2081 COG0362 # Protein_GI_number: 16765411 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 466 1 466 468 515 55.0 1e-146 MQKTDIGVIGLAVMGRSLALNMADHGFKVGGYNRSREVTDALVKEHPHDNLVPFYDLETL VASQERPRRFLIMVKAGKPVDMVIDQLVLLLDKGDMILDGGNSFFEDTRRREKRLKAEGI YYFGTGVSGGEHGARFGPSIMPGGEESAYRHIAPVLEAVAAKAQGEPCCAYMGPDGAGHY VKMVHNGIEYADMQLIAEAYLLLKYAGNYTNEELADLFEEWNEGELKSYLIEITARIFRE ADDYAEGELVDHILDSAGQKGTGRWTSLESLKQGVNVSMITAACNARIMSNRIAERNAAK ALIKEAAKQPAADKKAFGESVRKGLYTAKIVAYAQGFDLLRHASSEYGWDLNYGRIASIF RAGCIIQAQFLDDITKAFENDSELSNLMLDSYFLEGINSGKGSLQSILCLGIQNGIPLPA MSQAEAYIDAFRGTPTGANLIQAQRDCFGAHTYERTDREGVFHHDWGQDNE >gi|224461045|gb|GG657759.1| GENE 2705 2839291 - 2840733 1154 480 aa, chain + ## HITS:1 COG:lin2085 KEGG:ns NR:ns ## COG: lin2085 COG0364 # Protein_GI_number: 16801151 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Listeria innocua # 18 479 5 488 491 362 39.0 1e-100 MNGQTEKAYSITTGGRTMNKEQTFTIFGGTGDLTFRKLIPALYNMAAAGNEQLNGRIVVI GRRDYTSESYRKLAGEWVEKFARLTYREEIYDKLAERIVYYRMDFTDEDEYRGLDAFYTE IGARAHIFYFAVAPRFFGTIVQGLKSVHGAGSGKVVIEKPFGENLLAAEELNVRMEAFFG PDHIYRIDHYLGKEMVRNIQTIRFANPIFSNIWDAGHIECIQISALEEVGVETRGGYYDH SGALKDMMQNHLFQILTIVAMERPEGPGVEEMHREQMKVLKALCMPEAAAGSMVLGQYGG YRKEQAVDENSATETYAALRLFVENDRWGGMPFYIRTGKKLRKREMQVAVVFKSPVPGVP QNILNIKIQPTEGVYLQFNIKRPGEADEIIQAKMDFCQSCSYINQMNTPEAYERLLGACI RGERSWFSQWDQIETSWKYVDAIREQYVSGSLPVYSYEPGTAGPKEADEMLRQHGHAWFD >gi|224461045|gb|GG657759.1| GENE 2706 2840948 - 2842144 1331 398 aa, chain + ## HITS:1 COG:CAC1819 KEGG:ns NR:ns ## COG: CAC1819 COG0436 # Protein_GI_number: 15895095 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 3 398 1 397 398 417 51.0 1e-116 MALTLSEKAARVKPSSTLAITAKAKAMKAEGIDVVGFGAGEPDFNTPDNINEAAIRAIRS GFTKYTPASGTVELKKAISSKFREFNGLDYAPDQIVVSNGGKHSLTNIFQAITNPGDEVI IPAPYWLTYPEIVKLCDSVPVVIYGTKETGYKVTAKQIEDAVTDRTKALILNTPSNPTGM VYTEEELRAIADVAVRNDFYVVADEMYEYLIYGEKKHVSIASLGEEIYRRTITCSGLSKS YSMTGWRIGYTGSSVEIAKLMGSIQSHQTSNPNSIAQKAALEALSGPQDAVEAMRKEFDA RRKYMYERVQNMPLLECLEPEGAFYTFVDFTNVLEKSYKGVRIGTASRAAEILIEDYSVA VVPCQDFGFDNFVRLSYAISMEGIEKGLNRIEDFVTSL >gi|224461045|gb|GG657759.1| GENE 2707 2842182 - 2842721 654 179 aa, chain + ## HITS:1 COG:TM1181 KEGG:ns NR:ns ## COG: TM1181 COG0494 # Protein_GI_number: 15643937 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Thermotoga maritima # 7 173 7 171 179 119 40.0 3e-27 MSGEVRRIKRELVYKGAILEVYNDTMEFANGNRAGWDYIHHVGAAAVVPVLDDGRILMVR QYRNALERETLEMPAGKLDAAGEAGIECSRRELEEETGYRAGQLEWLITIRPTVAYCDER IEIYVARDLTMSVQDLDENEYVLVRPYSLDELKGMIYDGTIEDSKTVAALLAYEDRYLR >gi|224461045|gb|GG657759.1| GENE 2708 2842822 - 2843361 634 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570682|ref|ZP_03779705.1| ## NR: gi|225570682|ref|ZP_03779705.1| hypothetical protein CLOHYLEM_06782 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06782 [Clostridium hylemonae DSM 15053] # 15 179 1 165 165 271 100.0 1e-71 MRIRENKKFFVLFCMLGFFIGILYANIVSKDYITSMGIFNDFFLNEYAQTDIGMAEYAWY IIRIRMMPVILLFALGCTRFRKGIVVAFLLWTGFSCGMIMTSAIMKMGIKGIVLCLLAMT PQFAFYIAGYVVLLWYLFSYPESKWNLTKTVCFLLLIALGIVLECYVNPVLMKMFLKTL >gi|224461045|gb|GG657759.1| GENE 2709 2843377 - 2844165 714 262 aa, chain + ## HITS:1 COG:BS_ripX KEGG:ns NR:ns ## COG: BS_ripX COG4974 # Protein_GI_number: 16079408 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Bacillus subtilis # 18 262 1 247 296 156 34.0 3e-38 MVWLYKLYAPRKPKEKRMEIRVKEYIEYLEARKHISANTRSAYLRDLERMYGYLREHGIE QFEDATAATLNSFLLFLEKNGLGGATIARNAAVVRGFYQYLFRKKIIEDDITEMMEAPKV ERKLPKSARREDIDKILSVPEGGSPKALRDRAMIEVLRCTGILVEELIKLRTEDVKLELG YVQCHFPGNQNAYPLDGPSLGALRRYLEEGRGKLIRREQDEVLFPNVRGAYMSRQGFWKV IRRYSEETDGEQKITPSMIRHT >gi|224461045|gb|GG657759.1| GENE 2710 2844235 - 2845599 1184 454 aa, chain - ## HITS:1 COG:BS_spoVB KEGG:ns NR:ns ## COG: BS_spoVB COG2244 # Protein_GI_number: 16079820 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Bacillus subtilis # 4 428 3 431 518 153 27.0 9e-37 MSRKRAIIKGTFILTLTGFATRFMGFFYRIFLSHTFGEEGVGLYQLIFPIYALCFSLTSA GIEIALSRCVAKRTTLGQEKEARELLYTSIIFTVIISCITTLLLQKYAWFISSAFLKDER CAELLVILSYAFPFAAVHSCICGYYFGLKMTGVPATSQLIEQVARIMSVYLIYVFGQKNG ITFGISIAVAGLIAGEVVSSLFCLRAITGKSMSMRKIRPGLPSFGRNIRELLFLSVPLTG SRVLLNVLQSVEAISIPLKLQAYGMTNKAALSTYGVLTGMALPCIMFPSAITNSISTMLL PTVAEIQALDDQREMSAIIKKVVSCCVLLGSGCCALLLLSGSWIGTFLFQSPAAGSFIVT LAWICPFLYTDNTLISIINGIGKTTLSFVINAIGLLIRIGSVLLLIPVYGIRGYLWGLLA SQLCIFLFCIFYLYYYLTIRRKVHRGQTPAGKGV >gi|224461045|gb|GG657759.1| GENE 2711 2845729 - 2846187 574 152 aa, chain + ## HITS:1 COG:CAC1675 KEGG:ns NR:ns ## COG: CAC1675 COG1959 # Protein_GI_number: 15894952 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 133 1 130 139 130 49.0 1e-30 MKLSTKGRYGLRAIIDLARYAETEPVSISSIAARQEISERYLEQLVGLMKKAGLVKSIRG AGGGYVLARDMKDISVGDVLRALEGSLEPVKCAAFYAEEGCMASDGCVTKYVWQKINDNI NHTVDEIKLDELVLESRRVNPEGECANPQCNK >gi|224461045|gb|GG657759.1| GENE 2712 2846211 - 2847392 1311 393 aa, chain + ## HITS:1 COG:MA2718 KEGG:ns NR:ns ## COG: MA2718 COG1104 # Protein_GI_number: 20091542 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Methanosarcina acetivorans str.C2A # 3 384 4 384 392 456 59.0 1e-128 MGRFIYLDNAATTKTAPEVVEAMLPYFTEKFGNPSSVYGFAAANKDVITAQRDIIARALG AKSSEIYFTAGGSESDNWALKATAEAYGHKGKHIITTKIEHHAILHTGEYLESKGFDVTY LDVDEDGVVKLEELKNAIRPDTILISVMYANNEIGTIQPIKEIGAIAHEHGILFHTDAVQ AFGQVPINVDECHIDMLSASGHKLNGPKGIGFLYIRTGVKIRSFVHGGAQERKRRAGTEN VPGIVGLGTAADRAVKTMEERSARETALRDYMIERVQKEIPYCRLNGHKTDRLPNNANFS FRFIEGESLLIMLDMKGICASSGSACTSGSLDPSHVLLAIGLPHEIAHGSLRLTLSDETT KEDIDYVIDNLKEIVEHLRKMSPLYEDFVKKNS >gi|224461045|gb|GG657759.1| GENE 2713 2847420 - 2847863 633 147 aa, chain + ## HITS:1 COG:MA2717 KEGG:ns NR:ns ## COG: MA2717 COG0822 # Protein_GI_number: 20091541 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Methanosarcina acetivorans str.C2A # 2 125 3 125 128 169 64.0 2e-42 MYSEKVMDHFQNPRNVGEIDDASGVGTVGNAKCGDIMRMYLDIDEDHIIRDVKFKTFGCG AAVATSSMATELVKGRTIEEALKVTNKAVMEALDGLPPVKVHCSLLAEEAIHAALWDYAE KNGIKIEGLEKPKSDIHEDEEEEEEAY >gi|224461045|gb|GG657759.1| GENE 2714 2847878 - 2848963 1163 361 aa, chain + ## HITS:1 COG:CAC2233 KEGG:ns NR:ns ## COG: CAC2233 COG0482 # Protein_GI_number: 15895501 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Clostridium acetobutylicum # 4 357 3 354 355 383 53.0 1e-106 MEKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEEERAVQEENGGCCGLSAVDD ARRVAAQLGIPYYVMNFRQEFKEHVIDYFVDEYTHGRTPNPCIACNRYVKWESLLKRSMD IGADYIATGHYARIEQLPNERYALKVSATDTKDQTYALYNLTQEQLRRTLMPVGMYEKEE IRRIAGSLGLEVANKPDSQDICFVPDGDYASYIEKEAGVKSLPGNFVTSDGTVVGTHKGI VHYTVGQRKGLGLSLGHPVFVLDIRPGTNEIVVGSNEESMSRYVRADNVNFMSVGGLPEK KRVWAKIRYNHRGAWCTAEKTGPDEIVCTFDEPQRAATPGQAVVLYDGEYVLGGGTIIGD E >gi|224461045|gb|GG657759.1| GENE 2715 2848968 - 2849774 945 268 aa, chain + ## HITS:1 COG:L37351 KEGG:ns NR:ns ## COG: L37351 COG1387 # Protein_GI_number: 15673198 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Lactococcus lactis # 1 261 1 259 269 135 31.0 6e-32 MMRADVHMHTSFSHDSKAAPEEMILGAIDKGLEMICFTDHYDKDDMEWGEESIFDPEEYF KVLLPLKEKYSGRMDIRIGVELGLRPYLGDYYRKFTAAYPFDFVIGSVHSVESTDPATGK LFEGRTDEEAYRTAFEEILTDIRSYKDYDVLGHLDYVVRYGAGREKAYTYRTFADVIDEI LRQLITDGKGMELNTAGLKYGLPFAHPHPDVLKRYRELGGEMITVGADGHCPEHIAYGFD RAEEILRSCGFKYYTEFSGRKPVFKQLP >gi|224461045|gb|GG657759.1| GENE 2716 2849912 - 2850925 909 337 aa, chain + ## HITS:1 COG:NMA0246 KEGG:ns NR:ns ## COG: NMA0246 COG0057 # Protein_GI_number: 15793264 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 334 1 331 334 439 67.0 1e-123 MAVKVAINGFGRIGRLAFRQMFGAEGYEVVAINDLTSPKMLAHLLKYDSSQGKYALADKV ESTDDSIIVDGKEIKIYAKANAEELPWGEIGVDVVLECTGFYTSKEKASAHVKAGARKVV ISAPAGNDLPTIVYNVNHETLKPEDTVISAASCTTNCLAPMAQALNDLAKIKSGIMCTIH AYTGDQMTLDGPQKKGDLRRSRAAAVNIVPNSTGAAKAIGLVIPELNGKLIGSAQRVPTP TGSTTILTAVVDGTVTVDEVNAAMKAAATESFGYNTDEIVSSDVIGMRYGSLFDATQTMV LPLDNGTTEVQVVSWYDNENSYTSQMVRTIKYFSELA >gi|224461045|gb|GG657759.1| GENE 2717 2851083 - 2852276 1515 397 aa, chain + ## HITS:1 COG:CAC0710 KEGG:ns NR:ns ## COG: CAC0710 COG0126 # Protein_GI_number: 15893998 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Clostridium acetobutylicum # 2 397 3 397 397 540 71.0 1e-153 MLNKKSVDDINVKGKKVLVRCDFNVPLIDGKITDENRLEAALPTIKKLAADGGRVILCSH LGKPKGEAVPSLSLAPVAARLSELLGQEVKFAADPEVVGPNAKAAVSAMKDGEIILLENT RYRAEETKNGEAFSKDLASLCDVFVNDAFGTAHRAHCSNVGVTQFVDTAVVGYLMQKEID FLGNAVNNPERPFVAILGGAKVSSKISVIENLLDKVDTLIIGGGMSYTFSKAQGGNVGKS LLEEDYCDYALDMLKKAKEKGVKLLLPVDTVIADDFSNDANSRVVKAGEIPADWEGLDIG PETAAMFSEAVEDAKTVVWNGPMGCFEMPNFATGTEAVAKALAETDATTIIGGGDSAAAV NQLGYGDKMSHISTGGGASLEFLEGKELPGVAAANDK >gi|224461045|gb|GG657759.1| GENE 2718 2852342 - 2853091 970 249 aa, chain + ## HITS:1 COG:BS_tpi KEGG:ns NR:ns ## COG: BS_tpi COG0149 # Protein_GI_number: 16080445 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Bacillus subtilis # 3 239 2 239 253 265 58.0 9e-71 MARRKIIAGNWKMNKTPSEAVALVEELKPLVANDEADVVFCVPAIDIIPVVEACKGTNIQ VGAENMYYEESGAYTGEISPAMLTDAGVAYVVLGHSERREYFAETSETVNKKMLKAFEHG ITPIMCCGETLEQREQGVTMDFIRQQVKVGFMGVTADQAKTAVIAYEPIWAIGTGKTATT EQAQEVCAGIRACIAEIYDEATAEAVRIQYGGSVNAATAPELFAQADIDGGLVGGASLKA DFGKIVNYK >gi|224461045|gb|GG657759.1| GENE 2719 2853181 - 2854722 1683 513 aa, chain + ## HITS:1 COG:CAC0712 KEGG:ns NR:ns ## COG: CAC0712 COG0696 # Protein_GI_number: 15894000 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Clostridium acetobutylicum # 1 510 1 509 510 624 62.0 1e-178 MSKKPTVLMILDGYGLNDSRKGNAVAEGRTPVMDKLRAECPFVKGYASGMAVGLPDGQMG NSEVGHLNMGAGRIVYQDLTKITKAIQDGDFFENKALLAACENVKKNGTSLHLMGLVSDG GVHSHNEHIYGLLRLAKMQGIEKVYVHCFLDGRDTPPASGKEYVEELVLRMKEIGVGEVA TVMGRYYAMDRDNRWERVEKAYRAMAEGIGEAASGGPEGIQASYDKDKTDEFVLPAVVMK DGAPVATVKDGDSVIFFNFRPDRAREITRTFCDDKFEGFDRGDRIKTTFVCFTEYDVTIG NKLVAFVKDEITNTFGEFLAASGKTQARIAETEKYAHVTFFFNGGVEEPNKGEDRILVKS PKVATYDLKPEMSAYEVCGKLVDAIKSDKYDVIIINFANPDMVGHTGVEAAAIKAIEAID ECVGMAVDALKEVDGQMFICADHGNAEQLIDDETGEPFTAHTTNPVPFILVNADPAFKLR EGGCLADIAPTLIEMMGMVQPKEMTGKSLLIRE >gi|224461045|gb|GG657759.1| GENE 2720 2854867 - 2859111 4031 1414 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 4 664 2 663 663 837 61.0 0 MSHKELYTLGIDIGSTTVKIAVLDEAGDVVFSDYERHFANIQETLSDLLGRAVYKLGPIQ VSPVITGSGGLTLAKHLAVPFVQEVIAVSTSLQDYAPQTDVAIELGGEDAKIIYFEHGNV EQRMNGVCAGGTGSFIDQMASLLQTDASGLNEYAKDYKALYSIAARCGVFAKSDIQPLIN EGASKEDLAASIFQAVVNQTISGLACGKPIRGHVAFLGGPLHFLSELKEAFVRTLKLDDE HTIAPKHSHLFAAIGSALSSKKDLDIPIQEMQNRLAGKIKMEFEVDRMEPLFSSEADYLE FKERHEKHQVPVKDLATYKGKAFLGIDAGSTTTKAALVGEDGTLLYSFYHNNEGDPLGTT ISAIKDIYSQLPEDVEIVHSCSTGYGEALIKAALLLDEGEVETVSHYYAASFFEPDVDCI LDIGGQDMKCIKIKNQTVDSVQLNEACSSGCGSFIETFAKSLNYTVEDFAHEALFARNPI DLGTRCTVFMNSKVKQAQKEGAEVADISAGLAYSVIKNALFKVIKVSSAAELGSHIVVQG GTFYNNAVLRSFEKIAGCRAIRPDIAGIMGAFGAALIARERYIDCEGTTMLSIEDINALE YRTTMTKCKRCTNNCRLTVNHFSGGRKFITGNRCERGLGKEKNENKLPNLFDYKTRRYFD YTPLSDEEAVRGIIGIPRVLNMYENYPFWFTFFTKLGFRVVLTPASTRKIYELGIESIPS ESECYPAKLAHGHIQWLIDEGIEHIFYPSIPYERNEFADANNHYNCPIVTSYPENIKNNI DAIANGEVDFIHPFISFADEAALAHRLTEELAKKFSILEDDIKAAVHEAWQELEACRDDM RRKGEETLKFLKETGNRGIVLAGRPYHIDPEVNHGLPELINSYNIAVLTEDAISHLNPVE RPLNVMDQWMYHSRLYAAANYVKTVDNLDLIQLNSFGCGLDAVTTDQVADILTDSDKIYT SLKIDEVNNLGAARIRVRSLLAAIRVREQRSTKRTVTSSAIEKVPFTKEMRSDYTILCPQ MSPMHFELLEPAFRASGYKVDVLPNDNKQAVDVGLKYVNNDACYPSLMVVGQIMEAILSG KYDTDKLAVIISQTGGGCRASNYIGFIRRALKKAGYSHIPVISINLSGLEGNPGFKITPA LALRGVYAAIFGDIFMKCVYRLRPYEAVPGSVNAMHRKWVKVCAEFVSAGYPSRRRFKKL CREIIEDFDNNIELLDVKKPRVGVVGEILVKFLPAANNHLVDLLENEGAEAVVPDLLDFL LYCFYNQNFKVSHLGFKKSKATMGNLGIKVLEWFRAPATEAFRASRHFDPPAHIEDLGRM ASEIVSLGNQTGEGWFLTGEMLELIHSGASNIVCTQPFACLPNHVVGKGVIKELRRRYPK SNVVAIDFDPGASEVNQLNRIKLMLSTANKNMEG >gi|224461045|gb|GG657759.1| GENE 2721 2859335 - 2860204 900 289 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2901 NR:ns ## KEGG: Cphy_2901 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 288 1 288 297 282 50.0 1e-74 MNWLNKLERKFGRYAIPNLMYYIIILYGAGFVLNLLNPQFYYQYLSLNAEAILHGQVWRI LTFIIQPPSKSIIFVVFALYLYYLIGRQLEMAWGAFRFNLYFFAGMLFHVIAAILAYLLT GLSLPLDVWYLNLSLFFAFAALYPDVQFLLFFIIPVKVKWLAWLDGAYFIWAVVQAFLPS YGGGVYGIYYKANALAAAVSLLNFVIFFLGSRNMKPYSPKQVKRKKEFYKKVQQARRPDN VYENGARHKCAVCGRTELDDPNLEFRYCSKCSGNYEYCQDHLFTHTHVK >gi|224461045|gb|GG657759.1| GENE 2722 2860237 - 2861673 1631 478 aa, chain + ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 1 477 1 471 473 466 53.0 1e-131 MKKTKIICTMGPNTNDAGLMRRLVQNGMDIARFNFSHGDHEEQKSRMDMLKKIREEEKKP IAILLDTKGPEIRTGVLKGGKKVTLNAGDKFVLTTKEIDGDAAGVSITYGGLVEDVQIGK KILIDDGLIELTVREKTDTDIICTVDNGGELGERKGVNVPNVPIRLPAITQKDKEDIKFG VEQEVDFIAASFVRNAECILEIRAWLKECGSPYIPIIAKIENAEGIKNIEEIIRCADGVM VARGDLGVEIPAEEVPYLQKMLIQKCNDYYKPVITATQMLDSMIRNPRPTRAEVTDVANA VYDGTDAVMLSGETAQGKYPLEALQMMVHIVENTEEHLDYEVILEKAAEHKRKGISSAIG YASVAAADNLGAKCIVTPSVSGATARVVSKFKPKADIIGVTPNESTLRRMQIYWGVRPYK SIEFNTTEDILTGAIELISAKQVVEPGDIIVLTAGIPSPNIKRSKEGVSNMMRIAVID >gi|224461045|gb|GG657759.1| GENE 2723 2862115 - 2863404 603 429 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570697|ref|ZP_03779720.1| ## NR: gi|225570697|ref|ZP_03779720.1| hypothetical protein CLOHYLEM_06797 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06797 [Clostridium hylemonae DSM 15053] # 1 429 137 565 565 860 100.0 0 MVKKAGGRERTNEEQVHAAERLELQKSYLTEAIRAVDSLDLMIDALISGDTKIQAPVVYQ DIDTILKGLTAHHMSADPEQRITAAALGMDILYAVYAMKEILEKIWPKLVQYVKPEVGPP YEILSQRQKNDCRLIMDVVRSELELRMSQVTMECLYIPFKPEFPTGCAMSANKRSILLSG GADICEAADFSISPGSPLNEEIGWKGHLATRINVDPITRDSLFIEDAVGKSLIDNEASNA HWYANLYGIQEDRVKTEPDANIKSLMQPKPQCIFNRLSYEFRSNYFRMTGIRPGESWKID YLRSREGQKRKKLGTLYIHITSDFMFGYDFNNTSSGESFFAFDFSDFLRETADSVIDGLI LQQQAVAAYRREQGSFGIGKRHSDLKTQMNRQYILNTKTEDFADCSEIYLFGLEDISLPE PVMEPEDIC >gi|224461045|gb|GG657759.1| GENE 2724 2863516 - 2864235 831 239 aa, chain + ## HITS:1 COG:BS_yrhO KEGG:ns NR:ns ## COG: BS_yrhO COG1378 # Protein_GI_number: 16079765 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 11 164 9 161 275 62 32.0 9e-10 MMESTTFVERLLEFGLTRQEAAIYQCLLGEGKTTGYEVAKLIGISRSNAYNSLASLTEKG GAYLVEEGTTRKYVPVPLREFCKNHLRMLEESRNWLISHLPTEKSSAEGYITIEGARHIL DKMKNLLAQAESRVYISCTRNYLLLFVRELEDLVAARRKVVIITDRPVHLANVKVYLGED RGMQIGLITDSKYVLTGEYGEGSLNTCLYSGQKNFVELYKRALGNEIKLLALREENRES >gi|224461045|gb|GG657759.1| GENE 2725 2864232 - 2865509 1371 425 aa, chain + ## HITS:1 COG:SP1978 KEGG:ns NR:ns ## COG: SP1978 COG0019 # Protein_GI_number: 15901801 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 3 416 2 413 416 559 63.0 1e-159 MKKETFVTKEQLDEIIKDYPTPFHLYDEKGIRRNMQALRDAFSWNKGYKEYFAVKATPNP YLIDILREYGCGCDCSSYTELMLSEAVGATGDDIMFSSNDTPAEEFIYAEKLGAIINLDD ITHIEFLEETIGYIPKTISCRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKILKSK GAEEFGIHAFLASNTVTNEYYPMLAKILFEEAVRLQKETGVHIKFINLSGGIGIPYTPDQ EPNDIRIIGDGVRRVYEEVLVPAGMGDVEIYTELGRFMLGPYGCLVTEAIHEKHTHKEYI GVDACAVNLMRPAMYGAYHHVTVMGREDCPCDHKYDVVGSLCENNDKFAIDRMLPKVEMG DILVIHDTGAHGFSMGYNYNGKLKSAELLLKEDGSAQLIRRAETPADYFATFDCFDIGKK LLNMR >gi|224461045|gb|GG657759.1| GENE 2726 2865578 - 2866213 874 211 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570700|ref|ZP_03779723.1| ## NR: gi|225570700|ref|ZP_03779723.1| hypothetical protein CLOHYLEM_06800 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06800 [Clostridium hylemonae DSM 15053] # 1 211 25 235 235 335 100.0 2e-90 MKTKKKSLLALLLVLVMVLLSGCQGMSKEDAKAYAQSVLDAQYKGEFKAYMEQTDTTEKE AKEMYEGNLDELLADAGIDESTLSEDMVKNYRDLFLEVGKQVNYKLGDAKEADDDSFTVD VKIKPLNAFEGLDDEVLSAVQAELGDADEIPSEDKINEMVYGKMYDILSEKIANPTYGDE QVVTIHVKPDKDGVYYIPDDDLTALDNASLL >gi|224461045|gb|GG657759.1| GENE 2727 2866612 - 2869845 1284 1077 aa, chain - ## HITS:1 COG:no KEGG:Elen_1195 NR:ns ## KEGG: Elen_1195 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 911 1026 1051 1166 1247 93 44.0 7e-17 MKKMRKSFWALLLAVMMLYPLMPAAVSAEGTDDSPSHCPAHTAHDDTCGYAEAKDALPCT FAHQHDDTCGWDKTQDAVPCAVEAAHVHDSGCGFSKAVAGSPCTHSCNLCSVSADAAAPT SDIGIPGGVKGTEGGTTPACRHIYFGGVVKTDVMNGNRDGEYSDQILWRVLENSSSEMVL LAEYYPAWRRFAPAAGNNNYRDSDIRRWLTGRTVTGNTREFLGNFTDAELAAINRQRAFD SGTGEAAASVTSDASGDYFWLPSSEEVKGTWFSGGNADRRAPVYADPSKGANWWLRSPGG SKYNNAAYVNLDGGVDDDGESISNYFGVRPAFKLRLSSVLFPSAAVGGKSVNVGDGFIDA GTPAGDWKLTILDSDTDNLNLTRAYVDTENVIPGTAAKITFEGAKTGGDKVVSCVLLDSD GNVTHYARLSDKESGSASITIPADLPAGSYTLRVYNEQLGGDKQTDYASTPKDIPLEVAI PTAYQHIYFGDVQRTDKDDHGNRDGEYTDQILWRVLDNSNGELMMMPEFFPAYRMFTYPD GGNNYATSDIRSWLNGDAAVMSTSREFLNNFTAAELSAINKQRVYDKDGVATETVTADND GDFFWLLSRSEAENEKYFPSGHADRRARIYARPSDSSEWSLRTPLSESSLFAHMVNADGG TGWSKITTSPTAIRPAFKLRLSSVLFPSAAEGGKSVNVGDGFIDAGAPAGDWKLTILDND TGNLSLTNADAGEKTVSPGDTVEITFAGAKIGGGKVVSCVLADESGKVTHYAKLSDKESG SALLSIPADLPPALYTLQVYNEQLSGGKKTDYASRPVNIPLTVKENTPAATYTVTFISGS TTVKEVPGIQPNQTVGSEWPDTPFKSGNTFGGWFTGQNGAGIQYTKTTPINGDVTLYAKW TPVSGPTYSYRTLTDPITRVKVSGSFTSNAVLAVKKSSLHEKGSYAACGDIRERQNGGGL IVLHDISLSSGKYIGGLIVEIPVGSKHNGREVLMIHCKDKVLERRTVKVENGVAKGSFFS LSPFAVAVPPSGTAAINASTASQTGDTANLLPWLLTMLSVLAGCALLLLYRKRNTKD >gi|224461045|gb|GG657759.1| GENE 2728 2870006 - 2870140 65 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570703|ref|ZP_03779726.1| ## NR: gi|225570703|ref|ZP_03779726.1| hypothetical protein CLOHYLEM_06804 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06804 [Clostridium hylemonae DSM 15053] # 1 44 50 93 93 65 100.0 1e-09 MNKKKVDAFFLVCYTIVVTLYVQINGGISGNGGAGEPGNRLSFW >gi|224461045|gb|GG657759.1| GENE 2729 2870235 - 2870750 92 171 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570704|ref|ZP_03779727.1| ## NR: gi|225570704|ref|ZP_03779727.1| hypothetical protein CLOHYLEM_06805 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06805 [Clostridium hylemonae DSM 15053] # 1 171 1 171 171 336 100.0 4e-91 MYCYDHKRKDIRCNTGICVKKMNVIQRVGAAYAGIARSVHYNTPRDESHVKGSALLDDRI RTSVIHPENLYDHISDSGANGAMFYFSILCTDHANYNTLVQAVNRAQQVADAHRGNKFYQ RPLEDARARLRAIVNRYLSIHAYADVESGVLILDTAYISDRRPYGGKIWGI >gi|224461045|gb|GG657759.1| GENE 2730 2870692 - 2870835 147 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLLILVIAGLTGEKYGESDCGQSRSILGVVKFTIHRFRGISFIENI >gi|224461045|gb|GG657759.1| GENE 2731 2870914 - 2871804 991 296 aa, chain + ## HITS:1 COG:no KEGG:HS_1632 NR:ns ## KEGG: HS_1632 # Name: not_defined # Def: large adhesin # Organism: H.somnus # Pathway: not_defined # 57 173 1469 1603 2914 123 57.0 7e-27 MEENKNFIPEIYIGENGNWFINNYDTGVKARGDDGITPHIGANGNWFLGDTDTGVEATGP KGDKGDPGPAGPQGLTGAAGPQGATGPQGLTGPQGPTGATGPQGATGPKGDTGAAGPQGP IGAAGPKGDPGAAGVQGPAGAAGPQGPKGEKGDTGAVGPAGPKGDKGEQGPAGPVHIANN LITDTEGFALDARQGRELNEELQAISGRVNSGVLNIGSYLKPSNDILAEALNTEYMFSLI SSGEFTTNVPNTYYRYTLGIVLRRKSDQITVILFGRDNGLATNRWDGTSWSGWKIR >gi|224461045|gb|GG657759.1| GENE 2732 2871944 - 2872573 621 209 aa, chain + ## HITS:1 COG:CAC0777 KEGG:ns NR:ns ## COG: CAC0777 COG0110 # Protein_GI_number: 15894064 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Clostridium acetobutylicum # 1 208 1 209 210 299 69.0 3e-81 MTIPEKLIYPRTGDKATIYLKNVISSPNIMVGDYTMYNDFVQDPVLFEKNNVLYHYPINH DKLVIGKFCSIACGARFLFNSANHRMNALSTYPFPLFFEEWGLDQKDVTDSWDNKGDIVV GNDVWIGYEAVILAGVTIGDGAIIGTRALVTKDVPPYTVVGGVPARPIKKRFSDETVSEL LEIKWWDWPKEKIADNIEAIKSGSIEKLR >gi|224461045|gb|GG657759.1| GENE 2733 2872642 - 2874927 2251 761 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 318 743 333 753 776 192 29.0 1e-48 MKQMNSKNLNKQITAAGILGIVITVILAVISTFSYRGLKHTQEQEAKQYLNEVVSQYKNA IGIKIDGNLQTLRALSTFIEKSEDISREQILAHLRSESRQNDFLRMGYITADGTGYFIDT DGTEHYDVNVGNESFVRKALTGEDSVSDTMTDRFSDAKINCYSVPVYQDGAVIGALTATT SASGFSSIIEQKLFGGNAYTHIIRSNGDFVIRSSHAVIQDNIGNIFDEGTVSPEDKEYIQ KSAKAGRSSFSTFEYKNEKYWTTIVPLGINDWNLFCVVPQDYLSENFGTLMTVFAVIMLC ITALFTILFIYIYRVIRKSREEIARLAYTDVLTGSDNRNKFILEMQRLIKESGHYAMVLL NINGFKFVNEFYGYDAGNMLLRHIAAVLAENVREHELCYRDNADQFGMLLKYRSREKLSV RLKMIQEQIHKFRLNSNQDYHILCNFGVMIIEKNGMSDVNADFDTVMNGALLALESVKGN EMDSIAFYDSALHEKAARRTEIENRMWSALERREFVMYLQPKFSLKDGVLHSAEALVRWM PGDGKMLYPDEFIPVFEQNGFITRLDMYMLEEACRCLAGWRDKGYAAVPVAVNQSRIFFY DAKYLNKLEQIVRHYEIDPSLILLEVTETVAMNNLEQIKDVIARLHGMGFKISMDDFGSG YSSLNTLRELDVDEIKLDREFLSTQSDTTRGEAIIRNVIHLAKDLCAATVAEGIETKQQL EFLKSLSCDIGQGYYFSKPVPADIFLQTVSEIGSPQHNTAT >gi|224461045|gb|GG657759.1| GENE 2734 2875171 - 2877786 3029 871 aa, chain + ## HITS:1 COG:CAC1098_2 KEGG:ns NR:ns ## COG: CAC1098_2 COG0749 # Protein_GI_number: 15894383 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Clostridium acetobutylicum # 404 871 65 531 531 478 52.0 1e-134 MAEKIVLIDGHSILNRAFYGLPDLTNSEGLHTNAVYGFLNIMFKILDEEAPEYLTVAFDV HAPTFRHEMYADYKGTRKPMAEELRQQVPVIKDVLKAMGINIIEQAGLEADDLLGTISKR CGRQGMDVSVISGDRDLLQLATKRVKIRIPKTKQGRTEIEDYYAEDVKERYQVTPEEFID LKALMGDASDNIPGVPSIGEKTATKIITEYHSIENAYEHVEELKPPRAAKALKEHWDMAV MSRKLAKINVDAGVAFRLDEAKLGNVFTEEAYGWFQRLQFKNLLGRFDVKAPSNSVEDCF REIASPEEAGKILAEAKKAALAGAVIFKDTKNTLPLFAGQADIGGIGLCYGADKIFCIRA DGDITAEYLLRELKEVSGSVQTFSMFDIKESMQYFTVAEPSACFDVTIAAYLLNPLKNDY TYEDVAREQLGLLLEDKVEDHVKVCYEAYTAYASVEPLRQKLKETQMEHLFTDIEMPLVF TLYDMEQNGVRIEAEALKFYGEQLGIKIEELEKEIYEAAGEEFNINSPKQLGVILFDKMG LKGGKKTKTGYSTAADVLDKLAPDYPVVAQILEYRQLTKLKSTYADGLSNYISGDGRIHG KFNQTITATGRISSTEPNLQNIPVRMELGRLIRKVFIPEDGYVFIDADYSQIELRVLAHC SGDEQLINAYKEQKDIHRITASQVFHVPFGEVTDLQRRNAKAVNFGIVYGISSFGLSQDL SITRKEAAKYIDDYFKTYPGIKLFLDDTVAHAKEMGYVVTLFGRRRPVPELSSSNFMQRS FGERVAMNSPIQGTAADIIKIAMIGVNRRLKEKHMRSRLVLQVHDELLIEAYGPELEEVK AILKDEMEHAASLEVPLEIDMHTGDNWYEAK >gi|224461045|gb|GG657759.1| GENE 2735 2877802 - 2878395 648 197 aa, chain + ## HITS:1 COG:BS_ytaG KEGG:ns NR:ns ## COG: BS_ytaG COG0237 # Protein_GI_number: 16079958 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Bacillus subtilis # 3 197 4 196 197 122 37.0 6e-28 MKIIGITGGVGAGKTQILEYLNDKYGATVCQADEVAKKLQKKGTDCHRAIVEHFGADILD PKGELNREKLAQIIFTDKEERAVLNGIVHPAVKEEIRKIIKKEERKHTSLFLLEAALLID DHYEQICDEIWYVYVEDAIRKKRLIYARGYDAEKVDDIIASQLPKDVFLRNSDRVIDNSG IFEETKIQLDEMIRNLW >gi|224461045|gb|GG657759.1| GENE 2736 2878447 - 2879244 880 265 aa, chain + ## HITS:1 COG:CAC3538 KEGG:ns NR:ns ## COG: CAC3538 COG1235 # Protein_GI_number: 15896774 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Clostridium acetobutylicum # 1 263 1 259 261 216 45.0 3e-56 MRLCSIASGSSGNCIYVGDDNTHLLVDTGISKKRIDQGLHTLGIKGEEIEGILITHEHID HIQGLGVFSRKYEVPIYATGGTIEGIKCTNSIGRMPEGLLHEIEVDDEFLLGSLKIQPFA ISHDARQPSGYRIEGDNKAVAVATDLGKYDEYTVEHLRELDAVLLEANHDIHMLEVGPYP YPLKRRVMGEKGHLSNELSGRLLCDILHDNLKYVMLGHLSKENNYEELAYETVKLEVSLG DNPYKGEDIPVMVAKRDTVSEIITV >gi|224461045|gb|GG657759.1| GENE 2737 2879263 - 2879535 457 90 aa, chain + ## HITS:1 COG:lin0537 KEGG:ns NR:ns ## COG: lin0537 COG3830 # Protein_GI_number: 16799612 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Listeria innocua # 3 90 2 89 89 84 52.0 7e-17 MKKCIITVVGKDTVGIIARVCTYLAETNINVLDISQTIVNGYFNMMAVVDVTNATKEIAA VSKELEEVGLGIGVTIHCQREEIFEKMHRL >gi|224461045|gb|GG657759.1| GENE 2738 2879566 - 2880930 1702 454 aa, chain + ## HITS:1 COG:lin0538 KEGG:ns NR:ns ## COG: lin0538 COG2848 # Protein_GI_number: 16799613 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 454 5 451 451 568 67.0 1e-162 MINIYEVNETNQMIEQENLDVRTITLGISLMDCIDSDLDALNEKIYRKITSMAEHLVSTG EQIEREYGIPIVNKRISVTPAALVGGAACKTEEDFVTIARTFDKAAKEVGVNFIGGYSAL VSKAMTKSDEALIRSIPQALACTERVCSSVNVGSTRTGINMDAVRLCGEIVKQTAEATKE DDSIGCAKLVIFCNAPDDNPFMAGAFLGVTEGDAVINVGVSGPGVVKHAIEQVRGKGFEE LCETIKKTAFKVTRVGQLVAGEASRRMGVPFGIVDLSLAPTPSVGDSVAEILEEIGLERT GAPGTTAALAMLNDQVKKGGVMASSYVGGLSGAFIPVSEDQGMIDAVNAGALTLEKLEAM TCVCSVGLDMIAIPGKTKASTISGIIADEMALGMVNQKTTAVRLIPVIGKDVGDTAQFGG LLGYAPIMPVNEFDCSVFVNRKGRIPAPIHSFKN >gi|224461045|gb|GG657759.1| GENE 2739 2880943 - 2881794 997 283 aa, chain + ## HITS:1 COG:DR1986 KEGG:ns NR:ns ## COG: DR1986 COG1307 # Protein_GI_number: 15806984 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 4 278 3 275 281 127 32.0 2e-29 MGKVAVVTDSNSGITQEEGKKLGIRILPMPFYINGELFYEDITLSQEEFYQKLGEDAEIS TSQPSPADVMELWEELLSEYDEVIHIPMSSGLSSSCQTAKMLSAEFDGKVRVIDNQRVSV TQRQSALDAVEMVRRGMTASEIEEVLMQERLEASIYITVDTLKYLKKGGRITPAAAALGT VLNLKPVLQIQGEKLDAFAKVRGIKAAKRTMLNAMEKDIEERFKGRRVNLEAAYTCTEEE ARAWKEEIEERFPGYEVHMDKLSLSVACHIGPGALAVACSREI >gi|224461045|gb|GG657759.1| GENE 2740 2882605 - 2883888 1266 427 aa, chain - ## HITS:1 COG:CAC1741 KEGG:ns NR:ns ## COG: CAC1741 COG1323 # Protein_GI_number: 15895018 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Clostridium acetobutylicum # 1 426 1 402 402 255 38.0 1e-67 MKIVGLITEYNPFHNGHLYHIEKAKEITGADAAVVVMSGNYVQRGAPAIMPKHLRAEVAL EAGVPVVMELPVCFATGSAEYFAAGAISLFEQLGCIDSICFGSECGDHGVLERIAHVVAD EPEEYKFSLQEGLRKGLSFPRARQLALKAYFKDDSLDAILEQPNNILGIEYIKALYLKKS PIRTYTIKRMVSGYHDESLSESYSSASAIRKLLAYASNSIHLEDEGMFDEPVMSEVLTRL EGQVPPSCIRLLEETHRTRYPIYSNDFSLLLKYKLLTETKDTLVKYVDITEDLANRIINH ANDFITFDQFCDLLKTRDMTYTRISRSLFHILLGITKYDMLSCRDDGCCHYAHILGFRKD AAHVLSHLKAHSNVPLVTKLTQTDTLSETGARMLTQDIFASNLYEAIITNKFKLPFVNEY QQSIVIL >gi|224461045|gb|GG657759.1| GENE 2741 2883997 - 2885439 1823 480 aa, chain + ## HITS:1 COG:FN1480 KEGG:ns NR:ns ## COG: FN1480 COG2239 # Protein_GI_number: 19704812 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Fusobacterium nucleatum # 33 480 2 449 449 370 44.0 1e-102 MGEEFSRSDADLLHNAEDICDPPQETEDYMEEREELTEERILEMLENRQYKELKEELENN MYPVDLADILADFEQKQLVMVFRLLAKEEAAETFTYMNSDLRELLINALTDSELEEVMEE MYLDDTVDVLEEMPANVVDRLLMATDEETRQQINALLQYPEDSAGSVMNVDYIALRKEMT VAESILKIRQVGLNKETIYTCYVTEKRRLVGVVDVKELLTTSESKTVEEIMDTNMLYAHT TDDQEEVARTITKYGLIALPIVDHEMCMVGIVTVDDAMYVLQEEVTEDISIMAGVSPNEE SYFGTGVISHVKNRLPWLLFLMLSATITQMIMNHYESALAVMPQLAGFIPMLMGTGGNCG SQSSTLVIRGLAVGEIEFGDIVKVIFKEIRVALLISVILSTVNGIRILVMGQGDVMIAVT IGLTMACTIILAKIVGCTLPLVAKKIGLDPAIMATPLISTLVDISTVTVYFAIVSLVFSI >gi|224461045|gb|GG657759.1| GENE 2742 2885605 - 2886606 1392 333 aa, chain + ## HITS:1 COG:MA3607 KEGG:ns NR:ns ## COG: MA3607 COG0280 # Protein_GI_number: 20092407 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Methanosarcina acetivorans str.C2A # 3 333 4 332 333 346 56.0 4e-95 MGFIDEIKAKAKTSRKTIVLPETEDIRTYEAAEAVIKEGTANVVLVGSKEEIEKNRGSFD VSGATVVDPATSEKTDGYIAKLVELRQKKGMTEEQARELLLTNYLYYGVMMVKMKDADGM VSGACHSTADTLRPCLQILKTKPGTKLVSAFFVMVVPDCDMGADGTFVFADAGLEQNPDP EKLAAIALSSADSFRLLTGEEPVVALLSHSTKGSAKHADVDKVVEAARIAKEAAPEGLMI DGEFQLDAAIVPEIGASKAPGSPVAGKANVLVFPDLDAGNIGYKLVQRLAKAEAYGPLTQ GIAAPVNDLSRGCSAKDIEGVVAITAVQCMAEN >gi|224461045|gb|GG657759.1| GENE 2743 2886642 - 2887832 1547 396 aa, chain + ## HITS:1 COG:TM0274 KEGG:ns NR:ns ## COG: TM0274 COG0282 # Protein_GI_number: 15643044 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Thermotoga maritima # 1 396 1 398 403 496 61.0 1e-140 MNVLVINCGSSSLKFQLINSDTEQVLAKGLCERIGIDGSLTYQPEGGEKVKSDKPMPTHT EAIQYVIDALTDAGTGVVKSLDEIGAVGHRVVHGGEKFASSVVITDEVLQAIEECNDLAP LHNPANLIGINACQKLMPGTPMVAVFDTAFHQTMPEEAYMYGLPYEYYEKYKVRRYGFHG TSHSFVSKRAAEIVGKPYEELRTIVCHLGNGASICAVKNGRSVDTSMGLTPLEGLVMGTR SGDIDPAIMEFIAKKEGLDIAGLMNMLNKKSGVLGLSNNLSSDFRDLDAGAKEGNKQAAV ALKVFAYRVAKYVGAYAAAMNGVDVIAFTAGVGENSGPVRADVLGYLGYLGIEVDEEANN TRGEEITISTPDSKVKVMVIPTNEELAIARETVALV >gi|224461045|gb|GG657759.1| GENE 2744 2887936 - 2888469 188 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|170754849|ref|YP_001782001.1| ribosomal protein L32 family protein [Clostridium botulinum B1 str. Okra] # 1 171 1 163 166 77 29 4e-12 MLIDLSEVLSEPHKPLDVTAACTMRTFQGKAGVYPVVPEEDAHITAEYRGSGKLLINGEC RLKVLIPCDRCLKEIPVEFDLNFTKRVLVSEPEEDSGQTEEYDEANYIDGYHLDVDKLLY NEILIGWPMKVLCCEDCKGMCSVCGQNLNEGTCDCEDPGLDPRMSVIRDVFKNFKEV >gi|224461045|gb|GG657759.1| GENE 2745 2888473 - 2888652 277 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227872300|ref|ZP_03990657.1| possible ribosomal protein L32 [Oribacterium sinus F0268] # 1 56 1 56 60 111 89 2e-22 MSICPKNKSSKARRDKRRANWKMSAPNLVKCSKCGELMMPHRVCKACGSYNKKEIIAQD >gi|224461045|gb|GG657759.1| GENE 2746 2888826 - 2888936 208 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMDIAMAAVLLGCFGLMKAFTEWCSRQVDIDIHEKG >gi|224461045|gb|GG657759.1| GENE 2747 2888979 - 2889056 83 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILLGIIILLIAAYLLYALVHPEKL >gi|224461045|gb|GG657759.1| GENE 2748 2889100 - 2890827 1776 575 aa, chain + ## HITS:1 COG:pli0052 KEGG:ns NR:ns ## COG: pli0052 COG2060 # Protein_GI_number: 18450334 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Listeria innocua # 1 573 1 572 573 710 65.0 0 MLQIALTLAIFILAVIPMGRYMYHIAANKKTFADPLFDRVDNGIYKICRIDRKGMNWKTY ALSLLMTNAVMILVGYLVLRLQHSLFLNPNGIEGMEPTLSFNTIISFMTNTNLQHYSGES GLSYLSQMLVIIFMMFTSAASGYAGCMAFCRGLAGRKKDLGNFYEDMVRITTRILIPWSL IFGLVLIWQGCPETFGANITVETIQGKLQDFAVGPVAALEIIKHLGTNGGGFLGANSATP FENPTIITNMIELISMMILPGACVLTFGKMCQDRKKEETAAAVKVKEPLFGRQGRTIFAA MSIIFLVGLTTCFLSEKAGNPVLEASGISQDMGSMEGKEVRFGADQSALFTTVTTSFTTG TVNNMHDTLTPLGGMVPLLHMMLNCVFGGKGVGLMNMLMYAILAVFICGLMVGRTPEYLG KKIEGREMKLVALVLIIHPLLILGFSALAVSIQPGLDGITNDGFHGLSQVLYEYSSASAN NGSGFEGLSDNTYFWNITTGLAMFFGRYIAIIAQLAVAGSLMAKKRVKASAGTMRTDNVI FAVLLVFIVYIFAALTFFPALALGPIAEHLTLWFS >gi|224461045|gb|GG657759.1| GENE 2749 2890855 - 2892921 2116 688 aa, chain + ## HITS:1 COG:CAC3681 KEGG:ns NR:ns ## COG: CAC3681 COG2216 # Protein_GI_number: 15896913 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Clostridium acetobutylicum # 4 688 2 684 685 957 75.0 0 MSKKQQKTKFVTKDILKSSVIGAFQKLNPVYMIKNPVMFIVETGFVLTLIMTAVPTIFGD DASLGNLRVYNGIVSVILFITVLFANFAESVAEGRGKAQAASLKKTKQDTQSRLIGRDNT ERIVNASQLKKDDIVLVKAGEIIPNDGEVIEGIASVDESAITGESAPVTREAGTDFSSVT GGTTVVSDWLKIRITSRPGESFLDKMIALVEGASRQKTPNEIALNTLLVGLTVIFLIVVV CLYPFATYSGVQIPVSTMIALLICLIPTTIGGLLSAIGIAGMDRVTRFNVIAMSGKAVEA CGDVDTMILDKTGTITFGNRLAAEFYPVKGREKEDLIDYAVMTSLCDPTPEGKSTVELAR SMGTMIDESAASQMEFIEFTAQSKMSGVNLPDGTKIRKGAADAIKAMVTEQGGSIPKDLD GLVEKIAGLGGTPLVVAAGNVICGVIYLKDTVKPGLVERFQRLRDIGIKTIMCTGDNPLT AATIAKEAGVDGFIAECKPEDKIEAIKSEQAEGKLVAMTGDGTNDAPALAQADVGLAMNS GTSAAKEAANMVDLDSDPTKILEVVEIGKQLLITRGSLTTFSIANDVAKYFAIIPAMFTL VIPQMQMLNIMHLATPMSAILSALIFNAVIIPCLIPIAMRGVKYKPMSAERMLLKNMGIY GLGGIIVPFAGIKIIDCLVAPLLSVLGI >gi|224461045|gb|GG657759.1| GENE 2750 2892934 - 2893581 758 215 aa, chain + ## HITS:1 COG:CAC3680 KEGG:ns NR:ns ## COG: CAC3680 COG2156 # Protein_GI_number: 15896912 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Clostridium acetobutylicum # 5 212 2 198 205 206 49.0 2e-53 MKSFLKYVRCAAVLTVLMLVVCGLAYPAALTGLGQALFAHQANGSLITAEGEKTTDPDKA VGSAIAGQDFSGSPEYVQSRVSGVNYNTYTKEEKEDGSYSGVASGGSNLAPSSEELKKRV EESVEQFLKEHPDVEKGDIPADLLTASGSGLDPDITPEAARIQIPAIAAETGLSEQELEE IVSRSTDGKVFGVFGHERVNVLKCNLEIAEALGEL >gi|224461045|gb|GG657759.1| GENE 2751 2893681 - 2895720 1675 679 aa, chain + ## HITS:1 COG:pli0050 KEGG:ns NR:ns ## COG: pli0050 COG2205 # Protein_GI_number: 18450332 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Listeria innocua # 19 665 7 640 888 540 45.0 1e-153 MDRDKRPDPREVLEKIQAEEDKIRRKEYGKLKIFLGYAAGTGKTYAMLEEALELRKNNID VVAGYIEPHARPETAALQEGLEHIPFLMKEYKGVNIREFDLDAALARRPKVLLVDELAHT NVKGCRHEKRYQDIEELLEHGINVYTTVNIQHLESLNDNIAGITSIQMKERIPDSIFDRA DQVKLVDIEPEELIERMREGKIYGGIQAERALQNFFTMDKLTALRETALRRMADRVNHLA KEEKKLLGRGEYSAGEHVLTCISPAPSNAKVIRAAARLAYAFHAEFTALYVETKTIQNAS EKVKKMRDENIRLARTLGAKITTVSGEDVARQIAEYAKVSNVTKIVMGRTAHKIFFGQTR KTLVESLNHYAPNLDVYIIPDLQSGNGQKPPSFLKTEHCLKGLKKTDVLILLFMLALGTA AGFAFSAFHMSEANIIMAYLLCVMLTAINTEGYICSVLSSVFSVLLFNYFFIKPLHSLQA YDTGYVFTFVMMLSVSLLTSWNMSNIQKQSKENAKRAYRTEILLMNSKKLRRVKGRRDIG DELASQIQKLMNFTVIIYMKTGGRIQQPDVYLREGIRKENRASLIQDYTSTEERAVVSWV FENGHRAGCTTHTLPYAKAIYLPVMDDDNVSAVVGMVLEERREIAAFEYDLINAMLGEAA LVFERFQKMEDKTGDSLTK >gi|224461045|gb|GG657759.1| GENE 2752 2895780 - 2896802 1128 340 aa, chain + ## HITS:1 COG:CAC1746 KEGG:ns NR:ns ## COG: CAC1746 COG0416 # Protein_GI_number: 15895023 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Clostridium acetobutylicum # 7 328 3 323 331 311 49.0 1e-84 MTEITRVALDAMGGDNAPGEMVKGAVDAVAREKSIKVFLVGKEEAIRRELEGCTYNSEQI EIVNATEVIETAEPPVNAIRRKKDSSIVVGMKMVKAGEADAFVSAGSSGAILVGGQTLVG RIKGVERPPLAPLIPTKTGVSLLVDCGANVDARASHLVQFAKMGSIYMENIMGVKNPRVG IVNIGAEEEKGNALVKETFPLLKETEGINFIGSVEARDIPHGAADVIVCEAFAGNIILKL YEGVGDVLIKKVKAGMMTSLRSKIGALLVKPALKETLKAFDASEHGGAPLLGLNGLVVKT HGSSRSKEVTNTLIQCVTFKQQRINEKIKNCIQTDAASAE >gi|224461045|gb|GG657759.1| GENE 2753 2896838 - 2897071 311 77 aa, chain + ## HITS:1 COG:CAC1747 KEGG:ns NR:ns ## COG: CAC1747 COG0236 # Protein_GI_number: 15895024 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Clostridium acetobutylicum # 1 75 1 75 77 63 57.0 9e-11 MEFEKLQEIIADVLNVEAGDITMETTFVDDLGADSLDIFQIIMGIEETFDIEIDNDDAEK IVSVGDAVEQIKNATNN >gi|224461045|gb|GG657759.1| GENE 2754 2897131 - 2897826 844 231 aa, chain + ## HITS:1 COG:BS_rncS KEGG:ns NR:ns ## COG: BS_rncS COG0571 # Protein_GI_number: 16078656 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Bacillus subtilis # 3 231 18 248 249 186 44.0 4e-47 MNQDLKQLEKRIGYTFKEFGLLKKAMMHSSYANEQHLHKYECNERLEFLGDAVLELVSSE FLFYEHAKMPEGELTKTRASMVCEPALAFCARELQIGDFLLLGKGEDATGGRKRESITSD AMEALIGAIYIDGGFANAKEFIERFILKDLENRKLFFDSKTILQEIVQANFKDAITYHLI GEEGPDHDKSFLVAVHIGEDEYGIGRGRTKKAAEQEAAYQSILKLHKKNIK >gi|224461045|gb|GG657759.1| GENE 2755 2897834 - 2898416 648 194 aa, chain + ## HITS:1 COG:CAC1751 KEGG:ns NR:ns ## COG: CAC1751 COG1196 # Protein_GI_number: 15895028 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Clostridium acetobutylicum # 1 194 1 194 1191 257 69.0 1e-68 MYLKSIEVQGFKSFAHKIKFDFHNGITAIVGPNGSGKSNVADAVRWVLGEQRVKQLRGGS MQDVIFSGTENRKPLSYASVAITLDNSDHHLPIDYEEVTVARKLYRSGESEYLINGSGCR LKDVNELFYDTGIGKEGYSIIGQGQIDKILSGKPEERRELFDEAAGIVKFKRRKNMSVKK LEEERQNLLRVNDI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:10:02 2011 Seq name: gi|224461044|gb|GG657760.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_1, whole genome shotgun sequence Length of sequence - 497648 bp Number of predicted genes - 461, with homology - 452 Number of transcription units - 214, operones - 109 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 1 - 89 89.0 # CP000885 [R:4137971..4138087] # 5S ribosomal RNA # Clostridium phytofermentans ISDg # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. 1 1 Tu 1 . - CDS 195 - 299 56 ## - Prom 479 - 538 80.3 - 5S_RRNA 331 - 390 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - 5S_RRNA 673 - 731 98.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. 2 2 Tu 1 . - CDS 1154 - 2506 1517 ## COG1066 Predicted ATP-dependent serine protease - Prom 2531 - 2590 5.9 - Term 2561 - 2617 14.6 3 3 Op 1 . - CDS 2632 - 3045 635 ## Cphy_3460 hypothetical protein 4 3 Op 2 . - CDS 3102 - 5540 2233 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 5 3 Op 3 . - CDS 5600 - 5968 447 ## COG1725 Predicted transcriptional regulators - Prom 5999 - 6058 6.2 - Term 6109 - 6146 3.1 6 4 Tu 1 . - CDS 6193 - 7308 937 ## COG0686 Alanine dehydrogenase - Prom 7501 - 7560 7.9 + Prom 7460 - 7519 8.5 7 5 Tu 1 . + CDS 7612 - 8469 633 ## COG1737 Transcriptional regulators - Term 8493 - 8524 3.2 8 6 Op 1 . - CDS 8542 - 9234 945 ## COG3201 Nicotinamide mononucleotide transporter 9 6 Op 2 5/0.000 - CDS 9237 - 10133 937 ## COG0524 Sugar kinases, ribokinase family 10 6 Op 3 . - CDS 10133 - 11125 1181 ## COG1397 ADP-ribosylglycohydrolase - Prom 11190 - 11249 6.6 + Prom 11243 - 11302 7.8 11 7 Tu 1 . + CDS 11354 - 12088 598 ## COG2188 Transcriptional regulators + Term 12244 - 12282 -1.0 - Term 12113 - 12168 7.5 12 8 Op 1 1/0.058 - CDS 12197 - 13489 1397 ## COG0477 Permeases of the major facilitator superfamily 13 8 Op 2 1/0.058 - CDS 13522 - 14619 1164 ## COG0006 Xaa-Pro aminopeptidase 14 8 Op 3 . - CDS 14648 - 15916 1102 ## COG1228 Imidazolonepropionase and related amidohydrolases - Prom 15965 - 16024 14.2 15 9 Tu 1 . + CDS 16349 - 16558 195 ## CD1118 hypothetical protein 16 10 Tu 1 . - CDS 16775 - 16975 176 ## ELI_1812 hypothetical protein + Prom 17472 - 17531 6.5 17 11 Tu 1 . + CDS 17568 - 17768 107 ## COG3655 Predicted transcriptional regulator + Term 17831 - 17862 1.7 + Prom 17830 - 17889 3.5 18 12 Op 1 . + CDS 17928 - 18413 156 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 19 12 Op 2 . + CDS 18406 - 18900 199 ## gi|225570754|ref|ZP_03779777.1| hypothetical protein CLOHYLEM_06857 + Term 18955 - 19003 5.0 20 13 Op 1 . - CDS 18994 - 19443 245 ## CDR20291_1780 hypothetical protein 21 13 Op 2 . - CDS 19491 - 20090 558 ## COG1396 Predicted transcriptional regulators 22 13 Op 3 . - CDS 20099 - 21370 1594 ## COG0151 Phosphoribosylamine-glycine ligase 23 13 Op 4 . - CDS 21441 - 22178 820 ## gi|225570758|ref|ZP_03779781.1| hypothetical protein CLOHYLEM_06861 24 13 Op 5 21/0.000 - CDS 22216 - 22842 666 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 25 13 Op 6 . - CDS 22836 - 23861 832 ## PROTEIN SUPPORTED gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 26 13 Op 7 . - CDS 23873 - 24385 662 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Term 24414 - 24457 1.4 27 14 Op 1 . - CDS 24464 - 26512 2330 ## Closa_1605 hypothetical protein 28 14 Op 2 . - CDS 26513 - 26911 451 ## gi|225570763|ref|ZP_03779786.1| hypothetical protein CLOHYLEM_06866 29 14 Op 3 . - CDS 26871 - 27359 335 ## COG4767 Glycopeptide antibiotics resistance protein 30 14 Op 4 . - CDS 27385 - 27537 191 ## 31 14 Op 5 1/0.058 - CDS 27552 - 28226 990 ## COG0461 Orotate phosphoribosyltransferase 32 14 Op 6 13/0.000 - CDS 28242 - 29144 1118 ## COG0167 Dihydroorotate dehydrogenase 33 14 Op 7 1/0.058 - CDS 29144 - 29917 867 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 34 14 Op 8 . - CDS 29910 - 30836 1195 ## COG0284 Orotidine-5'-phosphate decarboxylase 35 14 Op 9 . - CDS 30849 - 32135 1242 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Prom 32170 - 32229 6.9 - Term 32190 - 32224 3.6 36 15 Op 1 1/0.058 - CDS 32231 - 33415 1512 ## COG0793 Periplasmic protease 37 15 Op 2 2/0.000 - CDS 33432 - 34538 1363 ## COG0739 Membrane proteins related to metalloendopeptidases 38 15 Op 3 28/0.000 - CDS 34559 - 35467 1075 ## COG2177 Cell division protein 39 15 Op 4 . - CDS 35457 - 36143 336 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 40 15 Op 5 . - CDS 36161 - 37249 1253 ## COG2508 Regulator of polyketide synthase expression - Prom 37328 - 37387 7.3 - Term 37352 - 37394 6.4 41 16 Tu 1 . - CDS 37464 - 38162 889 ## EUBREC_0711 hypothetical protein - Prom 38189 - 38248 8.9 42 17 Tu 1 . - CDS 38272 - 38466 294 ## gi|225570778|ref|ZP_03779801.1| hypothetical protein CLOHYLEM_06881 - Prom 38510 - 38569 2.3 - Term 38586 - 38626 1.4 43 18 Op 1 . - CDS 38637 - 38828 354 ## COG1983 Putative stress-responsive transcriptional regulator 44 18 Op 2 . - CDS 38873 - 39706 1155 ## Trebr_2048 hypothetical protein 45 18 Op 3 5/0.000 - CDS 39710 - 40396 885 ## COG4709 Predicted membrane protein 46 18 Op 4 . - CDS 40393 - 40716 373 ## COG1695 Predicted transcriptional regulators - Prom 40911 - 40970 10.3 - Term 40910 - 40942 2.2 47 19 Op 1 . - CDS 41192 - 41317 90 ## 48 19 Op 2 8/0.000 - CDS 41341 - 44955 4149 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 49 19 Op 3 . - CDS 44952 - 48302 3324 ## COG3857 ATP-dependent nuclease, subunit B 50 19 Op 4 . - CDS 48330 - 49187 1040 ## COG0253 Diaminopimelate epimerase - Prom 49248 - 49307 8.1 + Prom 49253 - 49312 7.7 51 20 Tu 1 . + CDS 49355 - 50200 693 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 50260 - 50298 5.8 52 21 Op 1 . - CDS 50146 - 51420 660 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 53 21 Op 2 . - CDS 51426 - 51953 653 ## EUBREC_2423 hypothetical protein 54 21 Op 3 5/0.000 - CDS 51962 - 53824 2326 ## COG2217 Cation transport ATPase 55 21 Op 4 5/0.000 - CDS 53856 - 54215 360 ## COG0640 Predicted transcriptional regulators - Prom 54248 - 54307 5.1 - Term 54286 - 54334 9.2 56 22 Op 1 . - CDS 54385 - 56787 2444 ## COG2217 Cation transport ATPase 57 22 Op 2 . - CDS 56857 - 56919 58 ## - Term 56987 - 57037 12.1 58 23 Op 1 . - CDS 57052 - 57582 515 ## gi|225570796|ref|ZP_03779819.1| hypothetical protein CLOHYLEM_06899 - Prom 57611 - 57670 1.7 - Term 57616 - 57667 0.6 59 23 Op 2 . - CDS 57672 - 59099 678 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 60 23 Op 3 . - CDS 59127 - 59795 896 ## COG0692 Uracil DNA glycosylase 61 23 Op 4 2/0.000 - CDS 59863 - 60624 876 ## COG0107 Imidazoleglycerol-phosphate synthase 62 23 Op 5 . - CDS 60638 - 61243 675 ## COG0118 Glutamine amidotransferase 63 23 Op 6 40/0.000 - CDS 61283 - 62749 1770 ## COG0642 Signal transduction histidine kinase 64 23 Op 7 . - CDS 62750 - 63430 950 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 63460 - 63519 5.6 - Term 63522 - 63583 14.1 65 24 Tu 1 . - CDS 63592 - 68952 4356 ## SpiBuddy_2449 cell wall/surface repeat protein - Prom 68984 - 69043 5.9 66 25 Tu 1 . - CDS 69142 - 69924 642 ## COG0496 Predicted acid phosphatase - Term 69931 - 69983 18.6 67 26 Op 1 2/0.000 - CDS 70015 - 71445 1839 ## COG1070 Sugar (pentulose and hexulose) kinases 68 26 Op 2 . - CDS 71491 - 72276 200 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 69 26 Op 3 . - CDS 72294 - 72530 90 ## gi|225570807|ref|ZP_03779830.1| hypothetical protein CLOHYLEM_06910 70 26 Op 4 . - CDS 72523 - 73407 998 ## COG1578 Uncharacterized conserved protein 71 26 Op 5 . - CDS 73424 - 73999 779 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 72 26 Op 6 . - CDS 74006 - 75616 1868 ## COG1292 Choline-glycine betaine transporter 73 26 Op 7 . - CDS 75621 - 76136 396 ## gi|225570811|ref|ZP_03779834.1| hypothetical protein CLOHYLEM_06914 74 26 Op 8 29/0.000 - CDS 76111 - 77130 951 ## COG2025 Electron transfer flavoprotein, alpha subunit 75 26 Op 9 1/0.058 - CDS 77127 - 77924 781 ## COG2086 Electron transfer flavoprotein, beta subunit 76 26 Op 10 1/0.058 - CDS 77921 - 79363 1446 ## COG0277 FAD/FMN-containing dehydrogenases 77 26 Op 11 29/0.000 - CDS 79382 - 80314 737 ## COG2025 Electron transfer flavoprotein, alpha subunit 78 26 Op 12 1/0.058 - CDS 80311 - 81141 785 ## COG2086 Electron transfer flavoprotein, beta subunit 79 26 Op 13 . - CDS 81145 - 82602 1759 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 82776 - 82835 7.6 + Prom 82864 - 82923 8.2 80 27 Tu 1 . + CDS 83058 - 84299 892 ## COG0477 Permeases of the major facilitator superfamily + Term 84313 - 84356 6.9 - Term 84553 - 84583 1.3 81 28 Tu 1 . - CDS 84732 - 85442 796 ## COG3773 Cell wall hydrolyses involved in spore germination - Prom 85535 - 85594 12.4 - Term 85617 - 85659 10.4 82 29 Op 1 1/0.058 - CDS 85683 - 87620 1405 ## COG0642 Signal transduction histidine kinase 83 29 Op 2 . - CDS 87697 - 88410 446 ## COG1145 Ferredoxin - Prom 88440 - 88499 3.0 84 30 Op 1 36/0.000 - CDS 88505 - 89191 335 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 85 30 Op 2 2/0.000 - CDS 89211 - 91661 2008 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 91727 - 91786 3.4 - Term 91715 - 91765 -1.0 86 30 Op 3 40/0.000 - CDS 91788 - 93197 1056 ## COG0642 Signal transduction histidine kinase 87 30 Op 4 . - CDS 93198 - 93902 698 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 94014 - 94073 5.5 - Term 94087 - 94120 3.8 88 31 Tu 1 . - CDS 94139 - 94945 382 ## SAK_0759 prophage LambdaSa04, minor structural protein - Prom 95100 - 95159 4.8 89 32 Tu 1 . - CDS 95765 - 96364 533 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 96430 - 96489 4.5 90 33 Op 1 . + CDS 96302 - 96433 59 ## 91 33 Op 2 . + CDS 96460 - 96585 160 ## gi|225570830|ref|ZP_03779853.1| hypothetical protein CLOHYLEM_06934 92 34 Op 1 4/0.000 + CDS 97234 - 97455 108 ## COG0524 Sugar kinases, ribokinase family 93 34 Op 2 . + CDS 97468 - 98292 775 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 98365 - 98400 5.6 - Term 98347 - 98394 8.5 94 35 Tu 1 . - CDS 98414 - 100462 1119 ## COG3291 FOG: PKD repeat + Prom 100828 - 100887 11.5 95 36 Tu 1 . + CDS 100943 - 101368 582 ## COG0071 Molecular chaperone (small heat shock protein) - Term 101267 - 101327 1.7 96 37 Op 1 . - CDS 101488 - 102126 678 ## Bache_0269 hypothetical protein 97 37 Op 2 . - CDS 102145 - 102381 413 ## gi|225570837|ref|ZP_03779860.1| hypothetical protein CLOHYLEM_06941 98 37 Op 3 10/0.000 - CDS 102417 - 102884 624 ## COG0691 tmRNA-binding protein 99 37 Op 4 . - CDS 102871 - 105024 1760 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Prom 105050 - 105109 3.4 - Term 105056 - 105089 4.0 100 38 Op 1 . - CDS 105117 - 105386 412 ## Closa_2213 preprotein translocase, SecG subunit 101 38 Op 2 . - CDS 105461 - 106768 1703 ## COG0148 Enolase 102 38 Op 3 . - CDS 106831 - 107946 1288 ## COG1454 Alcohol dehydrogenase, class IV - Prom 108034 - 108093 4.1 + Prom 107980 - 108039 8.7 103 39 Tu 1 . + CDS 108073 - 108915 1065 ## COG1284 Uncharacterized conserved protein - Term 108832 - 108879 1.1 104 40 Tu 1 . - CDS 109036 - 110382 1724 ## COG1109 Phosphomannomutase - Prom 110448 - 110507 5.2 - Term 110490 - 110527 9.2 105 41 Tu 1 . - CDS 110544 - 111935 1407 ## COG2509 Uncharacterized FAD-dependent dehydrogenases - Prom 111995 - 112054 7.0 - Term 112131 - 112179 15.3 106 42 Op 1 . - CDS 112195 - 113373 1259 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 107 42 Op 2 . - CDS 113388 - 114101 681 ## Closa_2181 Inosine monophosphate cyclohydrolase-like protein - Prom 114134 - 114193 5.9 + Prom 114226 - 114285 6.3 108 43 Tu 1 . + CDS 114311 - 115414 842 ## gi|225570848|ref|ZP_03779871.1| hypothetical protein CLOHYLEM_06952 + Term 115590 - 115631 5.2 - Term 115539 - 115579 1.9 109 44 Op 1 . - CDS 115814 - 116434 670 ## CD3160 putative ABC transporter permease 110 44 Op 2 . - CDS 116391 - 117629 1022 ## CDR20291_3015 putative ABC transporter permease 111 44 Op 3 3/0.000 - CDS 117629 - 118507 1038 ## COG1131 ABC-type multidrug transport system, ATPase component 112 44 Op 4 40/0.000 - CDS 118581 - 119843 1103 ## COG0642 Signal transduction histidine kinase 113 44 Op 5 . - CDS 119831 - 120505 803 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 120543 - 120602 3.1 - Term 120520 - 120572 11.1 114 45 Op 1 . - CDS 120615 - 120935 318 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase 115 45 Op 2 . - CDS 120955 - 121386 606 ## DSY1202 hypothetical protein - Prom 121466 - 121525 1.7 - Term 121521 - 121567 4.0 116 46 Tu 1 . - CDS 121568 - 123046 1509 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 123071 - 123130 5.7 - Term 123093 - 123138 7.2 117 47 Op 1 36/0.000 - CDS 123367 - 124008 235 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 118 47 Op 2 10/0.000 - CDS 124018 - 125502 888 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 119 47 Op 3 . - CDS 125516 - 126769 880 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 126824 - 126883 4.8 120 48 Op 1 9/0.000 - CDS 126894 - 127580 467 ## COG3279 Response regulator of the LytR/AlgR family 121 48 Op 2 . - CDS 127558 - 128910 947 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 128930 - 128989 5.7 - Term 129024 - 129071 12.3 122 49 Tu 1 . - CDS 129110 - 129661 310 ## COG1396 Predicted transcriptional regulators - Prom 129740 - 129799 5.2 + Prom 129656 - 129715 8.0 123 50 Tu 1 . + CDS 129827 - 130408 533 ## COG1280 Putative threonine efflux protein + Term 130409 - 130445 2.2 124 51 Op 1 . - CDS 130457 - 131668 1267 ## COG1457 Purine-cytosine permease and related proteins 125 51 Op 2 . - CDS 131668 - 132495 870 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 132515 - 132574 2.6 126 52 Op 1 . - CDS 132599 - 133261 537 ## COG0637 Predicted phosphatase/phosphohexomutase 127 52 Op 2 6/0.000 - CDS 133258 - 133914 777 ## COG0352 Thiamine monophosphate synthase 128 52 Op 3 . - CDS 133886 - 134707 980 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family - Prom 134888 - 134947 6.3 - Term 134726 - 134764 7.0 129 53 Op 1 . - CDS 134950 - 135507 642 ## COG0782 Transcription elongation factor 130 53 Op 2 . - CDS 135527 - 136168 795 ## COG1878 Predicted metal-dependent hydrolase - Term 136188 - 136226 2.9 131 54 Op 1 . - CDS 136280 - 136492 221 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 132 54 Op 2 . - CDS 136593 - 137219 662 ## gi|225570874|ref|ZP_03779897.1| hypothetical protein CLOHYLEM_06978 - Prom 137335 - 137394 15.9 + Prom 137324 - 137383 15.1 133 55 Op 1 3/0.000 + CDS 137490 - 137861 455 ## COG2033 Desulfoferrodoxin 134 55 Op 2 . + CDS 137910 - 138071 320 ## COG1592 Rubrerythrin + Term 138188 - 138241 8.9 - Term 137995 - 138030 -0.9 135 56 Op 1 . - CDS 138075 - 138752 552 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 136 56 Op 2 . - CDS 138768 - 139457 673 ## Cbei_3033 hypothetical protein 137 56 Op 3 . - CDS 139465 - 139917 564 ## COG3279 Response regulator of the LytR/AlgR family - Prom 139952 - 140011 3.1 138 57 Op 1 . - CDS 140028 - 140291 296 ## ELI_2856 hypothetical protein 139 57 Op 2 . - CDS 140303 - 140680 516 ## ELI_2857 hypothetical protein 140 57 Op 3 . - CDS 140706 - 141071 436 ## COG3877 Uncharacterized protein conserved in bacteria - Prom 141094 - 141153 10.6 141 58 Tu 1 . - CDS 141208 - 142590 1568 ## COG0534 Na+-driven multidrug efflux pump - Prom 142660 - 142719 7.8 - Term 142619 - 142665 13.6 142 59 Op 1 . - CDS 142747 - 143403 516 ## EUBELI_01749 hypothetical protein 143 59 Op 2 8/0.000 - CDS 143403 - 144251 909 ## COG1131 ABC-type multidrug transport system, ATPase component 144 59 Op 3 . - CDS 144254 - 144625 425 ## COG1725 Predicted transcriptional regulators - Prom 144645 - 144704 6.3 - Term 144641 - 144687 -0.4 145 60 Tu 1 . - CDS 144794 - 145630 280 ## COG0500 SAM-dependent methyltransferases 146 61 Tu 1 . - CDS 146023 - 146298 281 ## COB47_0934 hypothetical protein - Prom 146319 - 146378 1.8 - Term 146665 - 146707 3.2 147 62 Op 1 . - CDS 146847 - 147074 227 ## gi|225570892|ref|ZP_03779915.1| hypothetical protein CLOHYLEM_06996 148 62 Op 2 . - CDS 147080 - 147412 158 ## TepRe1_2398 hypothetical protein - Prom 147434 - 147493 2.5 - Term 147437 - 147479 9.6 149 63 Op 1 59/0.000 - CDS 147504 - 147896 585 ## PROTEIN SUPPORTED gi|240144422|ref|ZP_04743023.1| 30S ribosomal protein S9 150 63 Op 2 . - CDS 147925 - 148353 620 ## PROTEIN SUPPORTED gi|239623392|ref|ZP_04666423.1| ribosomal protein L13 151 63 Op 3 . - CDS 148374 - 148445 65 ## - Prom 148465 - 148524 2.3 152 63 Op 4 . - CDS 148530 - 150170 1785 ## BDP_1333 arylsulfate sulfotransferase - Prom 150210 - 150269 3.9 153 64 Tu 1 . - CDS 150271 - 151062 796 ## COG0778 Nitroreductase - Prom 151154 - 151213 3.3 + Prom 151105 - 151164 5.1 154 65 Tu 1 . + CDS 151185 - 152537 1227 ## COG0534 Na+-driven multidrug efflux pump + Term 152544 - 152577 2.0 - Term 152501 - 152537 2.2 155 66 Tu 1 . - CDS 152570 - 153034 465 ## Daud_1142 acetyltransferase - Prom 153092 - 153151 4.8 + Prom 153117 - 153176 7.6 156 67 Tu 1 . + CDS 153254 - 154567 1350 ## COG0366 Glycosidases + Term 154584 - 154645 6.4 - Term 154653 - 154708 13.7 157 68 Op 1 . - CDS 154714 - 155220 603 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 158 68 Op 2 . - CDS 155259 - 156482 846 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 156604 - 156663 2.9 159 69 Op 1 . - CDS 156938 - 157657 542 ## Swol_1999 hypothetical protein 160 69 Op 2 . - CDS 157663 - 158787 1308 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 161 69 Op 3 2/0.000 - CDS 158823 - 159656 1031 ## COG1737 Transcriptional regulators 162 69 Op 4 3/0.000 - CDS 159679 - 160587 372 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 160671 - 160730 6.0 163 69 Op 5 1/0.058 - CDS 160764 - 161216 528 ## COG2731 Beta-galactosidase, beta subunit 164 69 Op 6 2/0.000 - CDS 161243 - 162748 1946 ## COG0591 Na+/proline symporter 165 69 Op 7 3/0.000 - CDS 162774 - 163691 1146 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 166 69 Op 8 . - CDS 163740 - 164426 936 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase - Prom 164452 - 164511 9.2 + Prom 164593 - 164652 9.5 167 70 Tu 1 . + CDS 164726 - 165451 879 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 165483 - 165531 17.2 - Term 165471 - 165519 16.4 168 71 Op 1 . - CDS 165534 - 166475 1010 ## EUBREC_1831 hypothetical protein 169 71 Op 2 . - CDS 166502 - 167533 969 ## COG0523 Putative GTPases (G3E family) - Prom 167563 - 167622 3.0 - Term 167662 - 167717 11.0 170 72 Tu 1 . - CDS 167775 - 169757 2566 ## COG3808 Inorganic pyrophosphatase - Prom 169783 - 169842 7.6 171 73 Op 1 . - CDS 169912 - 170673 864 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 172 73 Op 2 . - CDS 170688 - 170948 203 ## Slip_0274 hypothetical protein 173 73 Op 3 . - CDS 170974 - 172251 1564 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB - Prom 172355 - 172414 6.5 - Term 172315 - 172351 0.1 174 74 Op 1 . - CDS 172416 - 173570 978 ## COG0520 Selenocysteine lyase 175 74 Op 2 8/0.000 - CDS 173560 - 174399 627 ## COG0101 Pseudouridylate synthase - Prom 174444 - 174503 3.4 176 74 Op 3 34/0.000 - CDS 174507 - 175331 724 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 177 74 Op 4 15/0.000 - CDS 175328 - 176236 427 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 178 74 Op 5 . - CDS 176167 - 177036 602 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 177056 - 177115 3.0 179 75 Op 1 . - CDS 177144 - 178082 965 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 180 75 Op 2 . - CDS 178094 - 178612 677 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 178641 - 178700 5.8 181 76 Tu 1 . - CDS 178758 - 179369 673 ## Closa_2635 hypothetical protein - Prom 179509 - 179568 4.8 - Term 179565 - 179614 4.3 182 77 Tu 1 . - CDS 179630 - 180046 470 ## gi|225570930|ref|ZP_03779953.1| hypothetical protein CLOHYLEM_07034 - Prom 180088 - 180147 5.9 183 78 Tu 1 . - CDS 180162 - 180767 825 ## Pjdr2_5585 hypothetical protein 184 79 Tu 1 . - CDS 180875 - 181291 519 ## COG0432 Uncharacterized conserved protein - Prom 181338 - 181397 5.6 + Prom 181384 - 181443 7.3 185 80 Tu 1 . + CDS 181484 - 181996 571 ## gi|225570933|ref|ZP_03779956.1| hypothetical protein CLOHYLEM_07037 - Term 182019 - 182069 0.3 186 81 Op 1 . - CDS 182120 - 182971 1075 ## Clole_1368 hypothetical protein - Prom 182995 - 183054 3.6 187 81 Op 2 1/0.058 - CDS 183058 - 183885 660 ## COG1180 Pyruvate-formate lyase-activating enzyme 188 81 Op 3 . - CDS 183891 - 185246 1045 ## COG3885 Uncharacterized conserved protein 189 81 Op 4 . - CDS 185306 - 186583 1717 ## COG3681 Uncharacterized conserved protein 190 81 Op 5 . - CDS 186601 - 187440 936 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding - Prom 187470 - 187529 5.9 - Term 187517 - 187560 9.6 191 82 Op 1 . - CDS 187575 - 188201 808 ## Cphy_3706 hypothetical protein - Prom 188221 - 188280 3.5 192 82 Op 2 . - CDS 188296 - 188805 545 ## Closa_0702 CarD family transcriptional regulator - Prom 188896 - 188955 5.6 - Term 188838 - 188880 7.0 193 83 Op 1 . - CDS 189013 - 191172 1950 ## COG0370 Fe2+ transport system protein B 194 83 Op 2 . - CDS 191181 - 191420 234 ## Closa_3332 FeoA family protein - Prom 191472 - 191531 5.0 + Prom 191373 - 191432 4.6 195 84 Tu 1 . + CDS 191531 - 191950 354 ## COG1321 Mn-dependent transcriptional regulator + Term 191953 - 192004 0.1 - Term 191941 - 191990 3.5 196 85 Tu 1 . - CDS 192042 - 192209 214 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 192231 - 192290 3.0 197 86 Op 1 . - CDS 192425 - 193351 701 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 198 86 Op 2 3/0.000 - CDS 193431 - 194015 482 ## COG0352 Thiamine monophosphate synthase 199 86 Op 3 5/0.000 - CDS 194030 - 195247 1084 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 200 86 Op 4 5/0.000 - CDS 195264 - 196043 964 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 201 86 Op 5 5/0.000 - CDS 196056 - 196688 832 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 202 86 Op 6 . - CDS 196692 - 196889 293 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis - Prom 196943 - 197002 2.4 - Term 197324 - 197365 3.2 203 87 Op 1 14/0.000 - CDS 197378 - 197974 603 ## COG0688 Phosphatidylserine decarboxylase - Prom 198007 - 198066 5.8 204 87 Op 2 . - CDS 198273 - 198941 810 ## COG1183 Phosphatidylserine synthase 205 87 Op 3 . - CDS 198963 - 199967 1037 ## COG0392 Predicted integral membrane protein 206 87 Op 4 . - CDS 199981 - 200709 484 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 200734 - 200793 6.7 - Term 200837 - 200876 8.2 207 88 Tu 1 . - CDS 200900 - 201112 93 ## gi|225570955|ref|ZP_03779978.1| hypothetical protein CLOHYLEM_07059 - Prom 201224 - 201283 2.5 - Term 201682 - 201728 10.1 208 89 Tu 1 . - CDS 201755 - 204385 2551 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Prom 204527 - 204586 8.1 209 90 Op 1 . + CDS 204668 - 205837 1233 ## COG0686 Alanine dehydrogenase 210 90 Op 2 . + CDS 205875 - 207275 1690 ## COG1757 Na+/H+ antiporter + Term 207299 - 207345 13.1 - Term 207284 - 207336 16.1 211 91 Op 1 . - CDS 207352 - 208749 1917 ## COG1362 Aspartyl aminopeptidase - Prom 208839 - 208898 6.4 212 91 Op 2 . - CDS 208908 - 210908 2120 ## COG2015 Alkyl sulfatase and related hydrolases - Prom 211145 - 211204 6.8 + Prom 210972 - 211031 6.1 213 92 Tu 1 . + CDS 211245 - 213800 2262 ## COG2909 ATP-dependent transcriptional regulator + Term 213808 - 213858 12.3 - Term 213796 - 213846 16.1 214 93 Op 1 9/0.000 - CDS 213866 - 215065 1342 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 215 93 Op 2 . - CDS 215093 - 216157 1104 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 216327 - 216386 9.3 + Prom 216289 - 216348 8.3 216 94 Tu 1 . + CDS 216460 - 217725 906 ## COG3633 Na+/serine symporter + Term 217763 - 217807 14.0 - Term 217755 - 217791 8.1 217 95 Tu 1 . - CDS 217812 - 218522 511 ## COG1357 Uncharacterized low-complexity proteins - Prom 218546 - 218605 2.5 - Term 218553 - 218603 8.6 218 96 Op 1 1/0.058 - CDS 218630 - 220051 1461 ## COG0423 Glycyl-tRNA synthetase (class II) 219 96 Op 2 . - CDS 220095 - 220838 707 ## COG1381 Recombinational DNA repair protein (RecF pathway) 220 96 Op 3 . - CDS 220786 - 221001 119 ## gi|225570969|ref|ZP_03779992.1| hypothetical protein CLOHYLEM_07073 221 96 Op 4 . - CDS 221057 - 221992 1189 ## COG1159 GTPase 222 96 Op 5 . - CDS 222051 - 224972 3374 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like - Prom 225061 - 225120 5.0 - Term 225084 - 225122 6.2 223 97 Op 1 . - CDS 225144 - 225656 375 ## Sgly_2287 hypothetical protein 224 97 Op 2 . - CDS 225696 - 227315 1855 ## COG1757 Na+/H+ antiporter - Prom 227459 - 227518 5.9 + Prom 227716 - 227775 8.8 225 98 Tu 1 . + CDS 227839 - 230718 2118 ## COG0642 Signal transduction histidine kinase + Term 230753 - 230793 8.2 - Term 230740 - 230781 12.2 226 99 Tu 1 . - CDS 230820 - 234356 3194 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 234384 - 234443 5.3 + Prom 234495 - 234554 7.3 227 100 Tu 1 . + CDS 234651 - 236039 1406 ## COG0733 Na+-dependent transporters of the SNF family + Term 236216 - 236258 11.0 - Term 236569 - 236615 -0.5 228 101 Op 1 . - CDS 236764 - 238512 1570 ## COG1404 Subtilisin-like serine proteases 229 101 Op 2 . - CDS 238537 - 239148 628 ## COG1592 Rubrerythrin 230 101 Op 3 . - CDS 239211 - 240227 1161 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 240313 - 240372 4.8 + Prom 240217 - 240276 4.8 231 102 Tu 1 . + CDS 240376 - 241599 1201 ## COG0205 6-phosphofructokinase + Term 241609 - 241666 24.1 - Term 241596 - 241653 24.1 232 103 Op 1 4/0.000 - CDS 241671 - 242906 1010 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 233 103 Op 2 1/0.058 - CDS 242903 - 243355 461 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 234 103 Op 3 1/0.058 - CDS 243371 - 245254 2103 ## COG1151 6Fe-6S prismane cluster-containing protein - Prom 245274 - 245333 3.0 - Term 245298 - 245328 -1.0 235 103 Op 4 . - CDS 245342 - 245731 442 ## COG1959 Predicted transcriptional regulator - Prom 245808 - 245867 3.5 - Term 245808 - 245867 10.4 236 104 Tu 1 . - CDS 245883 - 247067 1520 ## COG0281 Malic enzyme - Prom 247094 - 247153 11.1 - Term 247353 - 247394 12.1 237 105 Op 1 21/0.000 - CDS 247501 - 248454 902 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 238 105 Op 2 16/0.000 - CDS 248451 - 249962 1347 ## COG1129 ABC-type sugar transport system, ATPase component 239 105 Op 3 . - CDS 249999 - 251003 1091 ## COG1879 ABC-type sugar transport system, periplasmic component 240 105 Op 4 . - CDS 251017 - 251814 716 ## COG0627 Predicted esterase - Prom 251862 - 251921 12.3 + Prom 251916 - 251975 7.2 241 106 Tu 1 . + CDS 252070 - 253188 789 ## COG1940 Transcriptional regulator/sugar kinase + Term 253241 - 253282 12.1 - Term 253229 - 253270 12.1 242 107 Op 1 . - CDS 253346 - 255115 1290 ## Bcell_3566 hypothetical protein 243 107 Op 2 . - CDS 255130 - 256617 1152 ## gi|225570996|ref|ZP_03780019.1| hypothetical protein CLOHYLEM_07100 - Prom 256656 - 256715 80.4 244 108 Op 1 . - CDS 257181 - 257558 386 ## gi|225571003|ref|ZP_03780020.1| hypothetical protein CLOHYLEM_07101 245 108 Op 2 . - CDS 257620 - 257784 187 ## gi|225571004|ref|ZP_03780021.1| hypothetical protein CLOHYLEM_07102 246 109 Tu 1 . - CDS 258137 - 260794 1444 ## COG4886 Leucine-rich repeat (LRR) protein - Prom 260886 - 260945 4.1 + Prom 260844 - 260903 2.6 247 110 Tu 1 . + CDS 261026 - 262915 1335 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 262920 - 262964 6.0 - Term 262908 - 262952 6.0 248 111 Op 1 . - CDS 262965 - 263702 390 ## COG3279 Response regulator of the LytR/AlgR family 249 111 Op 2 . - CDS 263778 - 265283 992 ## COG0753 Catalase - Prom 265327 - 265386 7.9 + Prom 265393 - 265452 8.2 250 112 Op 1 . + CDS 265479 - 266093 198 ## BpOF4_17240 hypothetical protein 251 112 Op 2 . + CDS 266162 - 267304 843 ## COG1453 Predicted oxidoreductases of the aldo/keto reductase family 252 113 Op 1 . - CDS 267379 - 268815 926 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 253 113 Op 2 1/0.058 - CDS 268890 - 269864 819 ## COG1073 Hydrolases of the alpha/beta superfamily 254 113 Op 3 2/0.000 - CDS 269941 - 270711 944 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 255 113 Op 4 . - CDS 270726 - 271265 438 ## COG0655 Multimeric flavodoxin WrbA 256 113 Op 5 . - CDS 271266 - 271478 155 ## gi|225571015|ref|ZP_03780032.1| hypothetical protein CLOHYLEM_07113 257 113 Op 6 . - CDS 271512 - 272687 1346 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 272748 - 272807 5.0 + Prom 272787 - 272846 7.2 258 114 Tu 1 . + CDS 272890 - 273789 834 ## COG0583 Transcriptional regulator - Term 273627 - 273672 6.5 259 115 Op 1 . - CDS 273798 - 275045 1410 ## COG0205 6-phosphofructokinase 260 115 Op 2 4/0.000 - CDS 275115 - 275492 481 ## COG3862 Uncharacterized protein with conserved CXXC pairs 261 115 Op 3 6/0.000 - CDS 275480 - 276484 1091 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 262 115 Op 4 3/0.000 - CDS 276496 - 277926 1418 ## COG0579 Predicted dehydrogenase 263 115 Op 5 . - CDS 277926 - 279440 1701 ## COG0554 Glycerol kinase - Prom 279473 - 279532 3.9 264 115 Op 6 . - CDS 279534 - 279788 278 ## ELI_0858 hypothetical protein - Prom 279890 - 279949 5.5 - Term 280030 - 280071 5.4 265 116 Op 1 . - CDS 280082 - 281983 2016 ## MA2541 hypothetical protein - Prom 282075 - 282134 3.0 266 116 Op 2 . - CDS 282159 - 282626 687 ## COG4087 Soluble P-type ATPase - Prom 282665 - 282724 5.7 + Prom 282724 - 282783 6.6 267 117 Tu 1 . + CDS 282837 - 283079 257 ## Cphy_2061 hypothetical protein + Term 283092 - 283156 24.1 - Term 282961 - 282993 -0.1 268 118 Op 1 . - CDS 283135 - 283833 708 ## COG4912 Predicted DNA alkylation repair enzyme 269 118 Op 2 . - CDS 283857 - 284315 207 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 270 118 Op 3 . - CDS 284312 - 284509 300 ## gi|225571030|ref|ZP_03780047.1| hypothetical protein CLOHYLEM_07128 - Prom 284554 - 284613 6.3 - Term 284583 - 284626 6.1 271 119 Op 1 . - CDS 284677 - 285093 582 ## ELI_1767 putative lipoprotein 272 119 Op 2 9/0.000 - CDS 285140 - 286474 1037 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 273 119 Op 3 . - CDS 286524 - 287222 577 ## COG3279 Response regulator of the LytR/AlgR family - Prom 287409 - 287468 6.9 + Prom 287204 - 287263 3.1 274 120 Tu 1 . + CDS 287412 - 288170 577 ## CDR20291_1948 hypothetical protein + Term 288269 - 288315 -0.2 275 121 Op 1 . - CDS 288202 - 290037 1909 ## COG0514 Superfamily II DNA helicase 276 121 Op 2 . - CDS 290061 - 290678 709 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 277 121 Op 3 . - CDS 290721 - 291404 630 ## COG2013 Uncharacterized conserved protein - Prom 291424 - 291483 5.8 + Prom 291430 - 291489 5.1 278 122 Op 1 3/0.000 + CDS 291523 - 292410 711 ## COG2207 AraC-type DNA-binding domain-containing proteins 279 122 Op 2 . + CDS 292416 - 293336 623 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 280 123 Tu 1 . - CDS 293444 - 294292 900 ## CLH_2455 hypothetical protein - Prom 294517 - 294576 6.8 - Term 294536 - 294594 9.3 281 124 Op 1 36/0.000 - CDS 294602 - 296887 1590 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 282 124 Op 2 . - CDS 296887 - 297588 211 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 297659 - 297718 5.0 - Term 297782 - 297821 5.1 283 125 Op 1 . - CDS 297829 - 298437 584 ## COG3153 Predicted acetyltransferase 284 125 Op 2 . - CDS 298500 - 299090 683 ## ELI_3761 hypothetical protein - Prom 299260 - 299319 75.9 + TRNA 299245 - 299317 75.5 # Ala CGC 0 0 + Prom 299603 - 299662 2.6 285 126 Op 1 2/0.000 + CDS 299710 - 300075 341 ## COG1733 Predicted transcriptional regulators + Prom 300079 - 300138 4.0 286 126 Op 2 . + CDS 300161 - 300667 219 ## COG1881 Phospholipid-binding protein + Term 300681 - 300722 0.6 287 127 Tu 1 . + CDS 300745 - 301539 490 ## COG0300 Short-chain dehydrogenases of various substrate specificities - Term 301526 - 301563 -0.9 288 128 Tu 1 . - CDS 301593 - 301889 409 ## gi|225571049|ref|ZP_03780066.1| hypothetical protein CLOHYLEM_07148 - Prom 302110 - 302169 6.5 + Prom 302072 - 302131 10.0 289 129 Op 1 . + CDS 302198 - 302524 172 ## Bsph_3503 stage 0 sporulation protein A + Prom 302559 - 302618 5.4 290 129 Op 2 . + CDS 302685 - 303011 161 ## Bsph_3503 stage 0 sporulation protein A + Term 303012 - 303040 2.1 + Prom 303068 - 303127 5.2 291 130 Tu 1 . + CDS 303173 - 304012 466 ## Cphy_0275 XRE family transcriptional regulator + Term 304031 - 304064 -0.1 - Term 303814 - 303855 -0.5 292 131 Tu 1 . - CDS 304039 - 304488 327 ## TDE2416 hypothetical protein 293 132 Op 1 . - CDS 304607 - 305239 725 ## COG4845 Chloramphenicol O-acetyltransferase 294 132 Op 2 . - CDS 305260 - 306087 908 ## COG0266 Formamidopyrimidine-DNA glycosylase 295 132 Op 3 . - CDS 306155 - 307054 900 ## COG2378 Predicted transcriptional regulator 296 132 Op 4 1/0.058 - CDS 307072 - 309015 1616 ## COG2199 FOG: GGDEF domain 297 132 Op 5 1/0.058 - CDS 309094 - 310338 924 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 298 132 Op 6 . - CDS 310354 - 311148 1016 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 299 132 Op 7 . - CDS 311161 - 312285 1169 ## COG3949 Uncharacterized membrane protein - Prom 312379 - 312438 5.6 - Term 312436 - 312480 9.1 300 133 Op 1 . - CDS 312493 - 313863 1158 ## gi|225571062|ref|ZP_03780079.1| hypothetical protein CLOHYLEM_07161 301 133 Op 2 . - CDS 313950 - 314627 877 ## Cthe_0905 metal dependent phosphohydrolase - Prom 314723 - 314782 3.0 302 134 Op 1 . - CDS 314807 - 315490 704 ## COG5587 Uncharacterized conserved protein 303 134 Op 2 . - CDS 315503 - 316351 1085 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 304 134 Op 3 . - CDS 316413 - 317993 1271 ## Mbar_A0080 hypothetical protein 305 134 Op 4 . - CDS 317986 - 318738 720 ## COG1131 ABC-type multidrug transport system, ATPase component 306 134 Op 5 . - CDS 318759 - 319115 611 ## COG3304 Predicted membrane protein - Prom 319136 - 319195 5.7 - Term 319148 - 319200 12.1 307 135 Tu 1 . - CDS 319227 - 319487 176 ## CLJU_c17650 hypothetical protein - Prom 319532 - 319591 6.0 + Prom 319575 - 319634 5.1 308 136 Op 1 35/0.000 + CDS 319655 - 321433 205 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 309 136 Op 2 . + CDS 321420 - 323192 184 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 323267 - 323292 -0.8 - Term 323132 - 323163 1.1 310 137 Op 1 1/0.058 - CDS 323216 - 326569 2620 ## COG0642 Signal transduction histidine kinase 311 137 Op 2 . - CDS 326569 - 327846 1171 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 327869 - 327928 8.1 312 138 Op 1 . - CDS 327931 - 329211 789 ## COG2206 HD-GYP domain 313 138 Op 2 . - CDS 329247 - 331961 1876 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 314 138 Op 3 . - CDS 331970 - 333571 1448 ## COG2199 FOG: GGDEF domain - Prom 333756 - 333815 6.6 - TRNA 333655 - 333728 76.4 # Arg ACG 0 0 - Term 333602 - 333652 11.2 315 139 Op 1 . - CDS 333823 - 334056 344 ## CD1741 sarcosine reductase complex component B subunit alpha (EC:1.21.4.3) 316 139 Op 2 . - CDS 334084 - 335133 1356 ## CD1741 sarcosine reductase complex component B subunit alpha (EC:1.21.4.3) 317 139 Op 3 . - CDS 335151 - 336437 1532 ## CDR20291_1637 sarcosine reductase complex component B subunit alpha - Prom 336465 - 336524 5.2 - Term 336449 - 336480 1.1 318 140 Op 1 . - CDS 336583 - 337974 1456 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Term 337985 - 338018 2.3 319 140 Op 2 . - CDS 338034 - 338771 846 ## COG1335 Amidases related to nicotinamidase - Prom 338952 - 339011 10.1 + Prom 338922 - 338981 11.4 320 141 Op 1 . + CDS 339030 - 340541 1133 ## ELI_0263 hypothetical protein + Prom 340543 - 340602 3.1 321 141 Op 2 . + CDS 340658 - 341515 583 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 341546 - 341585 4.4 - Term 341532 - 341573 6.4 322 142 Tu 1 . - CDS 341678 - 341887 306 ## COG1278 Cold shock proteins - Prom 342003 - 342062 7.0 + Prom 342001 - 342060 10.1 323 143 Op 1 . + CDS 342160 - 342696 444 ## bpr_I1014 hypothetical protein 324 143 Op 2 . + CDS 342726 - 343322 721 ## COG0535 Predicted Fe-S oxidoreductases + Prom 343361 - 343420 6.8 325 144 Tu 1 . + CDS 343447 - 344097 454 ## COG4767 Glycopeptide antibiotics resistance protein + Prom 344128 - 344187 2.1 326 145 Tu 1 . + CDS 344230 - 345729 781 ## Closa_4135 hypothetical protein 327 146 Tu 1 . - CDS 345739 - 349578 2815 ## COG2200 FOG: EAL domain - Term 350207 - 350241 4.0 328 147 Tu 1 . - CDS 350266 - 351108 516 ## HS_1632 large adhesin - Prom 351269 - 351328 3.7 - Term 351379 - 351421 -0.8 329 148 Tu 1 . - CDS 351431 - 351892 232 ## COG1396 Predicted transcriptional regulators - Prom 351918 - 351977 7.8 - Term 352034 - 352076 2.8 330 149 Op 1 . - CDS 352091 - 352879 354 ## COG3409 Putative peptidoglycan-binding domain-containing protein 331 149 Op 2 . - CDS 352936 - 353766 256 ## BCE_1581 hypothetical protein - Prom 353790 - 353849 2.8 332 150 Tu 1 . - CDS 353888 - 353983 58 ## - Prom 354074 - 354133 4.6 333 151 Tu 1 . - CDS 354156 - 354335 96 ## gi|225571097|ref|ZP_03780114.1| hypothetical protein CLOHYLEM_07197 - Prom 354506 - 354565 6.6 334 152 Tu 1 . - CDS 354969 - 355181 103 ## Closa_2512 XRE family transcriptional regulator - Prom 355289 - 355348 6.7 + Prom 355191 - 355250 8.0 335 153 Tu 1 . + CDS 355476 - 356264 0 ## gi|225571101|ref|ZP_03780118.1| hypothetical protein CLOHYLEM_07201 + Term 356420 - 356466 4.3 - TRNA 357089 - 357175 69.1 # Leu TAA 0 0 - TRNA 357179 - 357251 82.2 # Val TAC 0 0 - 5S_RRNA 357194 - 357245 92.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - TRNA 357258 - 357331 84.2 # Asp GTC 0 0 - TRNA 357428 - 357501 83.3 # Met CAT 0 0 - TRNA 357531 - 357603 80.7 # Thr TGT 0 0 - TRNA 357614 - 357685 63.7 # Glu TTC 0 0 336 154 Op 1 . - CDS 357845 - 358036 277 ## COG1476 Predicted transcriptional regulators 337 154 Op 2 . - CDS 358036 - 358407 243 ## gi|225571104|ref|ZP_03780121.1| hypothetical protein CLOHYLEM_07210 - Prom 358438 - 358497 6.3 - Term 358418 - 358476 0.6 338 155 Tu 1 . - CDS 358533 - 359039 356 ## PROTEIN SUPPORTED gi|229871072|ref|ZP_04490663.1| acetyltransferase, ribosomal protein N-acetylase - Prom 359059 - 359118 10.7 339 156 Op 1 . - CDS 359185 - 359757 433 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 340 156 Op 2 . - CDS 359776 - 360315 621 ## COG3760 Uncharacterized conserved protein - Prom 360488 - 360547 4.2 + Prom 360329 - 360388 5.4 341 157 Tu 1 . + CDS 360465 - 361346 577 ## COG0583 Transcriptional regulator 342 158 Tu 1 . - CDS 361339 - 362091 619 ## gi|225571109|ref|ZP_03780126.1| hypothetical protein CLOHYLEM_07215 - Prom 362202 - 362261 5.4 + Prom 362065 - 362124 4.8 343 159 Tu 1 . + CDS 362214 - 363020 756 ## COG1402 Uncharacterized protein, putative amidase + Term 363033 - 363088 7.0 - Term 363025 - 363068 13.1 344 160 Op 1 . - CDS 363074 - 363463 214 ## Desal_0749 hypothetical protein 345 160 Op 2 6/0.000 - CDS 363433 - 364008 510 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 346 160 Op 3 . - CDS 364028 - 365497 1068 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 365527 - 365586 4.8 - TRNA 365770 - 365841 74.9 # Asn GTT 0 0 - LSU_RRNA 366728 - 367357 91.0 # CP001107 [D:12954..15836] # 23S ribosomal RNA # Eubacterium rectale ATCC 33656 # Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium. - 5S_RRNA 367593 - 367706 88.0 # CP000885 [R:4137971..4138087] # 5S ribosomal RNA # Clostridium phytofermentans ISDg # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + 5S_RRNA 367968 - 368026 94.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. - Term 368401 - 368434 4.5 347 161 Op 1 . - CDS 368485 - 369402 965 ## Cphy_0053 hypothetical protein 348 161 Op 2 . - CDS 369412 - 370665 1251 ## bpr_I0229 hypothetical protein 349 161 Op 3 . - CDS 370717 - 371805 1160 ## Cphy_0051 peptidoglycan-binding LysM - Prom 371853 - 371912 3.4 350 162 Tu 1 . - CDS 371920 - 372393 362 ## COG1418 Predicted HD superfamily hydrolase - Prom 372435 - 372494 5.2 351 163 Tu 1 . - CDS 372514 - 373689 588 ## gi|225571137|ref|ZP_03780135.1| hypothetical protein CLOHYLEM_07225 - Prom 373731 - 373790 5.7 - Term 373765 - 373811 8.4 352 164 Op 1 12/0.000 - CDS 373837 - 374775 1387 ## COG3958 Transketolase, C-terminal subunit 353 164 Op 2 . - CDS 374763 - 375599 955 ## COG3959 Transketolase, N-terminal subunit 354 164 Op 3 . - CDS 375623 - 376276 915 ## COG0176 Transaldolase - Prom 376334 - 376393 6.2 355 165 Op 1 . - CDS 376544 - 377641 1212 ## COG1609 Transcriptional regulators 356 165 Op 2 23/0.000 - CDS 377740 - 378336 720 ## COG0353 Recombinational DNA repair protein (RecF pathway) 357 165 Op 3 30/0.000 - CDS 378351 - 378698 175 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 358 165 Op 4 . - CDS 378736 - 380310 1869 ## COG2812 DNA polymerase III, gamma/tau subunits 359 165 Op 5 . - CDS 380346 - 381422 1124 ## COG0205 6-phosphofructokinase - Prom 381448 - 381507 7.4 + Prom 381532 - 381591 5.4 360 166 Tu 1 . + CDS 381628 - 382437 684 ## COG0024 Methionine aminopeptidase 361 167 Tu 1 . - CDS 382440 - 382997 389 ## CDR20291_3456 hypothetical protein - Prom 383079 - 383138 5.7 - Term 383112 - 383151 -0.5 362 168 Tu 1 . - CDS 383154 - 386174 2068 ## COG4403 Lantibiotic modifying enzyme - Prom 386292 - 386351 4.6 - Term 386314 - 386350 4.0 363 169 Op 1 . - CDS 386360 - 386509 189 ## gi|225571149|ref|ZP_03780147.1| hypothetical protein CLOHYLEM_07237 364 169 Op 2 9/0.000 - CDS 386535 - 387704 599 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Term 387717 - 387778 -0.2 365 169 Op 3 . - CDS 387836 - 388561 674 ## COG3279 Response regulator of the LytR/AlgR family 366 169 Op 4 . - CDS 388580 - 389137 495 ## gi|225571152|ref|ZP_03780150.1| hypothetical protein CLOHYLEM_07240 - Prom 389186 - 389245 4.8 + Prom 389179 - 389238 8.0 367 170 Tu 1 . + CDS 389258 - 389593 160 ## gi|225571153|ref|ZP_03780151.1| hypothetical protein CLOHYLEM_07241 + Term 389667 - 389719 4.2 - Term 389665 - 389692 0.1 368 171 Op 1 . - CDS 389720 - 391768 2052 ## COG0366 Glycosidases 369 171 Op 2 11/0.000 - CDS 391810 - 393657 1298 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 370 171 Op 3 10/0.000 - CDS 393674 - 394201 626 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 371 171 Op 4 1/0.058 - CDS 394185 - 395555 1002 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 372 171 Op 5 . - CDS 395626 - 397029 1642 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit - Prom 397057 - 397116 5.2 - Term 397050 - 397093 7.9 373 172 Op 1 . - CDS 397120 - 397443 418 ## gi|225571159|ref|ZP_03780157.1| hypothetical protein CLOHYLEM_07247 374 172 Op 2 . - CDS 397507 - 397860 263 ## gi|225571160|ref|ZP_03780158.1| hypothetical protein CLOHYLEM_07248 375 172 Op 3 . - CDS 397867 - 398151 255 ## EUBREC_0530 hypothetical protein 376 172 Op 4 1/0.058 - CDS 398201 - 398440 284 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Term 398468 - 398502 6.2 377 172 Op 5 . - CDS 398523 - 398798 316 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 398897 - 398956 5.6 378 173 Op 1 . - CDS 398976 - 400709 2163 ## COG1109 Phosphomannomutase 379 173 Op 2 . - CDS 400759 - 401850 732 ## Cphy_3824 CotS family spore coat protein - Prom 401884 - 401943 3.9 - Term 401924 - 401976 20.1 380 174 Tu 1 . - CDS 402003 - 403337 1257 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 403365 - 403424 6.5 - Term 403399 - 403451 20.1 381 175 Op 1 . - CDS 403498 - 404265 369 ## COG1943 Transposase and inactivated derivatives 382 175 Op 2 . - CDS 404373 - 405815 1222 ## COG0442 Prolyl-tRNA synthetase - Term 405983 - 406010 0.1 383 176 Tu 1 . - CDS 406219 - 407184 834 ## COG0530 Ca2+/Na+ antiporter - Prom 407234 - 407293 6.8 384 177 Tu 1 . + CDS 406865 - 408010 199 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Term 408122 - 408156 3.2 - Term 408109 - 408143 4.0 385 178 Op 1 . - CDS 408182 - 408475 228 ## COG2088 Uncharacterized protein, involved in the regulation of septum location 386 178 Op 2 7/0.000 - CDS 408506 - 409624 1177 ## COG0448 ADP-glucose pyrophosphorylase 387 178 Op 3 . - CDS 409621 - 410895 1193 ## COG0448 ADP-glucose pyrophosphorylase - Prom 410922 - 410981 10.3 + Prom 410941 - 411000 11.7 388 179 Tu 1 . + CDS 411126 - 412505 1219 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Prom 412545 - 412604 6.1 389 180 Op 1 3/0.000 + CDS 412642 - 413691 953 ## COG3935 Putative primosome component and related proteins 390 180 Op 2 . + CDS 413731 - 414744 800 ## COG1484 DNA replication protein 391 180 Op 3 . + CDS 414731 - 415915 1296 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 415937 - 415988 9.3 - Term 415919 - 415982 7.1 392 181 Op 1 . - CDS 416018 - 416974 941 ## Cmaq_0649 xylose isomerase domain-containing protein 393 181 Op 2 1/0.058 - CDS 417000 - 417938 980 ## COG1082 Sugar phosphate isomerases/epimerases 394 181 Op 3 38/0.000 - CDS 417956 - 418789 920 ## COG0395 ABC-type sugar transport system, permease component 395 181 Op 4 35/0.000 - CDS 418786 - 419682 957 ## COG1175 ABC-type sugar transport systems, permease components - Term 419693 - 419722 -0.9 396 181 Op 5 2/0.000 - CDS 419730 - 421013 1466 ## COG1653 ABC-type sugar transport system, periplasmic component 397 181 Op 6 16/0.000 - CDS 421041 - 422177 1042 ## COG0673 Predicted dehydrogenases and related proteins 398 181 Op 7 . - CDS 422174 - 423100 893 ## COG1082 Sugar phosphate isomerases/epimerases - Prom 423153 - 423212 9.4 + Prom 423148 - 423207 12.3 399 182 Tu 1 . + CDS 423290 - 424300 893 ## COG1609 Transcriptional regulators + Term 424323 - 424380 23.0 - Term 424310 - 424368 25.0 400 183 Op 1 5/0.000 - CDS 424383 - 425912 1591 ## COG4717 Uncharacterized conserved protein 401 183 Op 2 . - CDS 425927 - 426988 955 ## COG0420 DNA repair exonuclease 402 183 Op 3 40/0.000 - CDS 426894 - 428132 1462 ## COG0642 Signal transduction histidine kinase 403 183 Op 4 . - CDS 428122 - 428811 787 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 404 183 Op 5 . - CDS 428830 - 430221 1807 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases - Prom 430247 - 430306 7.5 + Prom 430257 - 430316 5.5 405 184 Tu 1 . + CDS 430505 - 430996 458 ## COG4708 Predicted membrane protein + Term 431015 - 431069 20.3 - Term 431004 - 431058 20.3 406 185 Op 1 . - CDS 431073 - 433532 2480 ## EUBREC_0675 hypothetical protein 407 185 Op 2 3/0.000 - CDS 433532 - 434683 1028 ## COG0500 SAM-dependent methyltransferases - Term 434709 - 434760 20.6 408 186 Op 1 40/0.000 - CDS 434766 - 437393 2597 ## COG0642 Signal transduction histidine kinase 409 186 Op 2 . - CDS 437406 - 438101 816 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 438233 - 438292 4.6 410 187 Tu 1 . - CDS 438627 - 439604 928 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) - Prom 439676 - 439735 5.8 + Prom 439581 - 439640 7.7 411 188 Tu 1 . + CDS 439755 - 440099 284 ## Closa_3226 sporulation transcriptional activator Spo0A + Term 440134 - 440191 10.8 - Term 440380 - 440426 5.3 412 189 Op 1 . - CDS 440437 - 441126 758 ## EUBELI_01840 hypothetical protein 413 189 Op 2 . - CDS 441138 - 442682 1604 ## EUBELI_01841 hypothetical protein - Prom 442714 - 442773 7.9 - Term 442929 - 442987 9.9 414 189 Op 3 . - CDS 442999 - 443892 899 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) - Prom 444069 - 444128 80.3 + TRNA 444044 - 444128 66.2 # Ser CGA 0 0 - Term 444031 - 444098 31.8 415 190 Op 1 . - CDS 444140 - 444433 425 ## gi|225571204|ref|ZP_03780202.1| hypothetical protein CLOHYLEM_07293 416 190 Op 2 . - CDS 444465 - 444884 419 ## Closa_1384 hypothetical protein 417 190 Op 3 . - CDS 444865 - 445053 225 ## gi|225571206|ref|ZP_03780204.1| hypothetical protein CLOHYLEM_07295 - Prom 445139 - 445198 7.5 + Prom 445447 - 445506 7.1 418 191 Op 1 . + CDS 445529 - 445855 363 ## COG1396 Predicted transcriptional regulators 419 191 Op 2 . + CDS 445913 - 446389 558 ## CLJU_c31730 hypothetical protein + Term 446548 - 446591 3.4 420 192 Tu 1 . + CDS 446758 - 447219 562 ## COG1522 Transcriptional regulators - Term 447174 - 447210 4.5 421 193 Op 1 . - CDS 447229 - 448110 881 ## Sdel_0336 hypothetical protein 422 193 Op 2 1/0.058 - CDS 448123 - 448893 942 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 423 193 Op 3 . - CDS 448910 - 449698 718 ## COG4336 Uncharacterized conserved protein 424 193 Op 4 21/0.000 - CDS 449695 - 450603 876 ## COG1984 Allophanate hydrolase subunit 2 425 193 Op 5 . - CDS 450594 - 451328 751 ## COG2049 Allophanate hydrolase subunit 1 426 193 Op 6 . - CDS 451346 - 452203 851 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 452233 - 452292 7.5 - Term 452239 - 452308 11.6 427 194 Op 1 . - CDS 452370 - 453320 1027 ## COG2267 Lysophospholipase 428 194 Op 2 . - CDS 453406 - 454776 1527 ## COG0372 Citrate synthase 429 194 Op 3 1/0.058 - CDS 454848 - 455723 1001 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 430 194 Op 4 . - CDS 455760 - 456539 710 ## COG0084 Mg-dependent DNase - Prom 456588 - 456647 4.0 431 195 Tu 1 . - CDS 456653 - 457639 900 ## Cphy_2659 diaminopimelate dehydrogenase (EC:1.4.1.16) - Prom 457687 - 457746 3.0 432 196 Tu 1 . - CDS 457758 - 459650 1882 ## COG0143 Methionyl-tRNA synthetase - Prom 459679 - 459738 5.5 - Term 459675 - 459714 4.5 433 197 Tu 1 . - CDS 459900 - 459992 76 ## - Prom 460063 - 460122 4.9 + Prom 460140 - 460199 6.5 434 198 Tu 1 . + CDS 460220 - 461938 1410 ## COG4805 Uncharacterized protein conserved in bacteria + Term 461983 - 462021 9.2 - Term 462047 - 462104 23.2 435 199 Tu 1 . - CDS 462108 - 462635 667 ## COG0700 Uncharacterized membrane protein - Prom 462692 - 462751 4.7 + Prom 462686 - 462745 8.5 436 200 Tu 1 . + CDS 462776 - 464134 1181 ## COG0534 Na+-driven multidrug efflux pump + Prom 464517 - 464576 3.6 437 201 Tu 1 . + CDS 464665 - 464904 186 ## gi|225571227|ref|ZP_03780225.1| hypothetical protein CLOHYLEM_07316 438 202 Op 1 . - CDS 464905 - 466041 1369 ## COG3853 Uncharacterized protein involved in tellurite resistance 439 202 Op 2 . - CDS 466091 - 467335 1352 ## ELI_1359 5-bromo-4-chloroindolyl phosphate hydrolysis protein - Prom 467401 - 467460 3.8 440 203 Op 1 . - CDS 467462 - 468721 1700 ## COG1301 Na+/H+-dicarboxylate symporters 441 203 Op 2 . - CDS 468737 - 469438 734 ## HMPREF0868_0216 DNA-binding helix-turn-helix protein - Prom 469606 - 469665 5.4 + Prom 469562 - 469621 9.4 442 204 Tu 1 . + CDS 469652 - 470968 1180 ## COG1114 Branched-chain amino acid permeases - Term 470906 - 470936 4.1 443 205 Op 1 . - CDS 470965 - 472356 921 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 444 205 Op 2 . - CDS 472364 - 472990 697 ## COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. - Prom 473074 - 473133 3.6 - Term 473106 - 473150 7.5 445 206 Op 1 2/0.000 - CDS 473217 - 474176 380 ## COG1609 Transcriptional regulators 446 206 Op 2 1/0.058 - CDS 474189 - 476414 458 ## COG3459 Cellobiose phosphorylase - Prom 476547 - 476606 5.9 - Term 477435 - 477485 3.0 447 207 Op 1 . - CDS 477507 - 479657 428 ## COG1472 Beta-glucosidase-related glycosidases 448 207 Op 2 38/0.000 - CDS 479676 - 480506 246 ## COG0395 ABC-type sugar transport system, permease component 449 207 Op 3 35/0.000 - CDS 480519 - 481403 321 ## COG1175 ABC-type sugar transport systems, permease components - Term 481420 - 481464 6.6 450 207 Op 4 . - CDS 481474 - 482718 598 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 482755 - 482814 7.1 451 208 Tu 1 . - CDS 482966 - 483703 839 ## gi|225571242|ref|ZP_03780240.1| hypothetical protein CLOHYLEM_07331 - Prom 483750 - 483809 5.4 + Prom 483640 - 483699 6.2 452 209 Tu 1 . + CDS 483837 - 484205 305 ## Clocel_1943 sporulation transcriptional activator Spo0A + Prom 484237 - 484296 11.6 453 210 Op 1 . + CDS 484365 - 485600 1600 ## COG5505 Predicted integral membrane protein 454 210 Op 2 . + CDS 485638 - 486612 977 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog + Term 486626 - 486661 6.1 - Term 486612 - 486648 7.1 455 211 Op 1 . - CDS 486669 - 487829 1438 ## COG0628 Predicted permease 456 211 Op 2 . - CDS 487831 - 490365 2668 ## COG0474 Cation transport ATPase - Prom 490408 - 490467 4.4 - Term 490417 - 490468 13.3 457 212 Tu 1 . - CDS 490603 - 492522 1718 ## COG2199 FOG: GGDEF domain - Prom 492558 - 492617 3.6 - Term 492561 - 492610 14.6 458 213 Op 1 . - CDS 492628 - 493017 475 ## COG2246 Predicted membrane protein 459 213 Op 2 1/0.058 - CDS 493004 - 495541 1775 ## COG4485 Predicted membrane protein 460 213 Op 3 . - CDS 495408 - 496481 776 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 496520 - 496579 7.7 + Prom 496479 - 496538 8.1 461 214 Tu 1 . + CDS 496611 - 496886 111 ## - TRNA 496703 - 496775 83.7 # Lys TTT 0 0 - TRNA 496802 - 496874 81.3 # Phe GAA 0 0 - TRNA 496912 - 496985 75.2 # Met CAT 0 0 - TRNA 497007 - 497082 81.3 # Thr TGT 0 0 - TRNA 497094 - 497175 54.9 # Tyr GTA 0 0 - TRNA 497185 - 497257 82.2 # Val TAC 0 0 - 5S_RRNA 497200 - 497251 92.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - TRNA 497261 - 497337 84.8 # Asp GTC 0 0 Predicted protein(s) >gi|224461044|gb|GG657760.1| GENE 1 195 - 299 56 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSYQGVSAQTGSQSCDASGLAGAGMEDRMHKKA >gi|224461044|gb|GG657760.1| GENE 2 1154 - 2506 1517 450 aa, chain - ## HITS:1 COG:BH0104 KEGG:ns NR:ns ## COG: BH0104 COG1066 # Protein_GI_number: 15612667 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus halodurans # 1 449 1 453 457 496 54.0 1e-140 MAKGKKSIFFCQNCGHEEGKWLGQCPACKEWNTFVEEKVTAARPGAARQMKEAEVVALSG VSTDEEARIKTTIEEMDRVLGGGIVPGSLVLVGGDPGIGKSTLLLQVCQKLSQEKEILYI SGEESLAQIKLRANRMGPFKDNLLLLCETNLELIRSVIEKRRPQLVVIDSIQTMYSEEVA SAPGSVSQVRESTNVFMQLAKGLGISIFIVGHVTKEGTVAGPRVLEHMVDTVLYFEGDRH ASYRILRGVKNRFGSTNEIGVFEMRQDGLQEVANPSEYMLSGRPENSSGSVVACSMEGTR PILIEIQALVCQSNFGMPRRTAAGTDYNRVNLLMAVLEKRAGLHLSNYDAYVNIAGGIKM NEPAIDLGIVMALISSYKNRPIDEKMIVFGEVGLSGEVRAVNMPEQRVAEAKKLGFETCV LPEVSRDLVKGVKGIRLVGVKTINEVLSLL >gi|224461044|gb|GG657760.1| GENE 3 2632 - 3045 635 137 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3460 NR:ns ## KEGG: Cphy_3460 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 136 1 136 137 153 61.0 2e-36 MAAVKELLKAEADGTLSFGDYTLDSKTKLDGFEFQGDLYKVKTFSEITKLEKNGMFVYES VPGTAVESFKATEEEVSFKVSGTQDAQFTLELEADSEYTVYMDGADAGDMKTNLSGKLSV SAELEPDECVEVRVVKK >gi|224461044|gb|GG657760.1| GENE 4 3102 - 5540 2233 812 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 3 795 6 798 815 864 55 0.0 MNYTEQANEVLQIAKAIARELDHPYVGTEHLLLGLRKVYTGVAGQVLAANGVDEENILKV VDELVSPVGNTTVAHNPEFSPRLQYILEESKGEALRFRSSDVGTEHMLLALLKEVDCVAA RILLTLGISLQKLYQDVLAVLGADPKEYQEDLMQESGRKREGVLEQYGTDLTAEAEEGKL DPVIGREAEINRLMQVLSRRTKNNPCLVGEPGVGKTAVIEGLASRIASGVVPDSMKEKRI LTMDLAGMIAGSKYRGEFEERMKKLIQEVKAAGNIILFLDEVHTIIGAGGAEGAMDASNI LKPSLARGELQLIGATTIVEYRKYIEKDAALERRFQPITVEEPTEEQCLDILRGLRSRYE EHHHVTIGDEALDASVRLADRYISDRFLPDKAIDVLDEACSKVSLKGFKVPDSIFELEGT ITELMKKTEDAVRQGNMQEASALHTEQEEAEKKLEEVRKRFRKRNAQKELYITEEDIADV VSEWTKIPVKRLAESESARLNKLEQTLHKRVIGQEEAVRAVSKAIKRGRVGLKDPKRPIG SFLFLGPTGVGKTELSKALSEALFGNEESMIRVDMSEYMEKHSVAKMIGSPPGYVGHDDG GQLSEQVRRHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSN AGAQAIIDPKKLGFNAREDAAGDYKRMKDNVMREIKLIFRPEFVNRIDEIIVFHPLTQEE MKKIVGLMCREFTKRAREQLDITITVRDSVKKHIVETGTDQKFGARPLRRAVQNQLEDRL AEAILSGEVERGSAVEIGMSKKDIKFISKTTN >gi|224461044|gb|GG657760.1| GENE 5 5600 - 5968 447 122 aa, chain - ## HITS:1 COG:CAC0599 KEGG:ns NR:ns ## COG: CAC0599 COG1725 # Protein_GI_number: 15893888 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 121 1 123 125 107 43.0 5e-24 MLIEIDFNSDEALYIQLRNQIIMGIATATIHEGDPLPSVRQLADTIGINMHTVNKAYSIL KQEGFIQLDRRRGAVIAIDVNKVQALEEMKRQLQIVLAKGSCKNITRDEVHALVDEIFEE YC >gi|224461044|gb|GG657760.1| GENE 6 6193 - 7308 937 371 aa, chain - ## HITS:1 COG:lin1614 KEGG:ns NR:ns ## COG: lin1614 COG0686 # Protein_GI_number: 16800682 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Listeria innocua # 1 360 1 360 370 399 59.0 1e-111 MKVGCVKEIKNNEFRVGMTPDNVKSYVNAGHEVYIEKGAGVGSGFMDPEYEAAGAKMIDT AKEVWDTVEMMIKVKEPLPDEYPLFHEGLILYTYLHLAADKPQTDALLNGKVKGVAYETL IERNGSIPLLAPMSQIAGRLSIQEGAKYLEKTFGGEGVLLAGVPGTPKANIVILGGGSVG TNACKIAVGMGANVTIMDINLQRLAYLDDIFGARIQTLVSTDANIENVIKDADLVIGSVL IPGKAAPKIFKKKYLKEMKPGAVFVDVAVDQGGCGETTKVTYHDDPIYEVDGIVHYCVGN MPGAVPRTSTIALTNATLNYGLQIANKGLEKACTDNDVIYSAINTYDGKLTCKNVADSFD SYEYVDIKSLW >gi|224461044|gb|GG657760.1| GENE 7 7612 - 8469 633 285 aa, chain + ## HITS:1 COG:BH2940 KEGG:ns NR:ns ## COG: BH2940 COG1737 # Protein_GI_number: 15615502 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 13 277 17 274 284 122 29.0 1e-27 MKELRETINNANLTKTQKMIARYVLDNSADACFMTSTEIALKLGVSESSVIRFSRSLGFD GFMDFQKNLRKDYQDKVLSISSSITVPSQRVAKRAKLDTSSDYINRHFKNAAKNMEAVFV NNSTALFEEAAEAIISSKRKYIISSRGNSCLGDYFLLYLKHMLPNVEMTNTASISPVDHM CNISKDDCVVAFSFPRYSSIDKISARMAYEVGAKIIVITDKPSALLAQYATVLFTVPVDS NTFFNSMVAPQFVAEALLDTVSHKVKGIERRLKKIDKYLGELGNY >gi|224461044|gb|GG657760.1| GENE 8 8542 - 9234 945 230 aa, chain - ## HITS:1 COG:PM1838 KEGG:ns NR:ns ## COG: PM1838 COG3201 # Protein_GI_number: 15603703 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pasteurella multocida # 11 222 14 225 234 139 40.0 6e-33 MEKTKRIFADWSRFEICWLVLSTVIMIVLSVIWGDNLLALISGITGILGVVLAAKGKVST YIFATVNVAIYALLTFQNHLYGEFMLNAFYYIPMNFIGFYLWSKHKDNESGEVEGKKLTG KQTVILFAAVAVVVLVYWQILSRIGGQLALIDAMSTVFSVVALIMQVARYAEQWLLWIIV NVVSVVMWLLLIGKDSSAVTMVVMWIAYLFNSVYGYYNWRKLAAKNVDNK >gi|224461044|gb|GG657760.1| GENE 9 9237 - 10133 937 298 aa, chain - ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 6 286 20 304 321 172 35.0 1e-42 MSKKCLIIGAAMLDIIMEIDRLPRSGEDIYAKAQKMTVGGCAYNAADIMKHFHAEHTLFA PLGTGMYAEVIEEELKKNGHESAVKSGRMDNGYCLCMVEADGERTFVTLPGIESVFEKEW FDSLNMEDYESVYVSGYEIEGAGGDVILDFLERSPELLVYYAPGPRISYIPAEKADRMYS LHPVLHLNETESLAASGADTAEEAAERLEEMTQNTVIITMGAGGVLLREEGRTSVIQAEK AEVADTIGAGDSHIGAVMAMRASGADFEKAVRTANKVSALVVGVKGPTLTKEQFEKGL >gi|224461044|gb|GG657760.1| GENE 10 10133 - 11125 1181 330 aa, chain - ## HITS:1 COG:yegU KEGG:ns NR:ns ## COG: yegU COG1397 # Protein_GI_number: 16130037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli K12 # 3 327 4 328 334 245 42.0 7e-65 MKDKILGVLYGMAIGDAMGMPPELWSRKRVLEHYGEIVDFLDGCPENIISYQYKAGQFTD DTSQALTILDSLAETDFVPSAESIAEHILRWAERENAFENNILGPTSKVALQLFREGKDA RSFSDEAVSNGAAMRIAPVGTLFEPEDRERLSDYVAAISQVTHTSDITIAGASMIAMAVA SAMKYGDRERMIEDALSVESYAMSLGASTPSPSLSARTKLAVGYAREYREDSRAFLEHIY NIIGAGVNTSESVPAALAIAYYSFDVRTCALLCANLGGDTDTIGAMAAAICGGAAGTAGI PDSYMAKIRQANKVDLEKYAQLLAEKRGKV >gi|224461044|gb|GG657760.1| GENE 11 11354 - 12088 598 244 aa, chain + ## HITS:1 COG:BMEII0116 KEGG:ns NR:ns ## COG: BMEII0116 COG2188 # Protein_GI_number: 17988460 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 2 241 5 241 244 106 30.0 4e-23 MSENKPKYKIIEHDLIEKIQSGELPSGAELPSESQLIAAYGVSRVTARRAIDELYHHGYI EKMQGKRTCVRRTARLQELTSISSYTEEIIRQGMTPGRKVIRSEIRISSPEEVEKLQLRK ADPVFYLERIYYADDTPLCFTQTTLPYEIFRDIEGYDFKNSSLYKIIEENYKVKISTTAL KLKAVPAYGDVMKHLDISRDTPLLYSSGLTYGVTEDSEIPIELFTTYYLTDHFEYTLTQS RNQN >gi|224461044|gb|GG657760.1| GENE 12 12197 - 13489 1397 430 aa, chain - ## HITS:1 COG:yihN KEGG:ns NR:ns ## COG: yihN COG0477 # Protein_GI_number: 16131714 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 20 424 12 420 421 147 28.0 3e-35 MKKENKTTGKLKGNMPTLIILIISGALIYALPYFRSYYYDSFVKLFNISNTQMGALGSAF GGASVFAYCLGGFCADRWPARGLMTISLIAAGLCGFILLLYPPYGVVFMVHLVWGITSIL TFWSALVKAIRSLADSDEQGKAFGFFEGGRGIVNMVQSAIILALFGYISKAVSEKAALSA IIAIYSTICILLGAMVFFMFKEPERTDGVPEKLFNIPVLKRVAKMPTTWLQILVIFCSYA MIISYFYITPYATSAFGASAIIAAALGYFSQYCRPVGCFVSGILADKFGSSKICAISYVI MIAGIAGLIVTPGSPSMIWMILVFIAAIYASMYAIQSMHYAIMEEGDYPLEITGTATAII TPIGYSAEFFMPIIGGMCLDHWNNSETGYKVFFGILGALALIGLIAILAWMVITKEKRMQ IMAEKNNGKE >gi|224461044|gb|GG657760.1| GENE 13 13522 - 14619 1164 365 aa, chain - ## HITS:1 COG:lin1613 KEGG:ns NR:ns ## COG: lin1613 COG0006 # Protein_GI_number: 16800681 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Listeria innocua # 4 359 1 362 365 225 38.0 1e-58 MKTLEERRKKLCRLLREEGIQKAVIGEPMNIVYLTGIHIVPYERFYGLVADAEKEEFTMI NPGVDTGCMKGTLREVTYQDENGPFEAVKEVVGTCDVLAVDKKYYSMAVGELFSGLQCRI TDIGMCAAKLRMYKDDREVETMQFAAKIVDEAIAYVSDRIRPGMTEKELNMMLYTYMSRY PGFITDEFIILVLAAANSANPHGVSGDYAFKEGDIVLMDFCAYYNYYWSDITRCVFVGEA KDPKLVEIYEIVRRANLAAISAVRPGVKAKEIDKAARDVITEAGYGELFLHRTGHGLGLS VHEEPYITAVNELVLEEGMTFTIEPGIYIEGTGGVRIEDDILVTKDGCRILTGTSKKLED HIIRY >gi|224461044|gb|GG657760.1| GENE 14 14648 - 15916 1102 422 aa, chain - ## HITS:1 COG:CC0300 KEGG:ns NR:ns ## COG: CC0300 COG1228 # Protein_GI_number: 16124555 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Caulobacter vibrioides # 47 410 69 427 428 129 27.0 1e-29 MKKSYLIICGKLFDGIREELQPHMEILVEGNKIVSTGRNLSRPKEVEIIDLGHLTVTPGM IDAHVHGNLMRWQETDNILFQSEGYSTLAFLHTAQRCLERGFTTIRCNGMGPGGYGIVDV REVISRGLFPAARMNVGAHMLGGPGMPGDMSMYASTNEPLSDFMQIKTIGSGRDFFRDQV RREVKYGTDFIKIFLSGSFLSPDGGPEISYLDDEELEIIIRTAHDLGKPVTAHVYPPRMM KKLLEFGIDGMEHGALMDEETARTFEKQDTYLVPTFSPFQDVIEGNDELVDMNTEDSRMK LRKYAPQLRESREIIRGSQIRLGFGSDFCAVHQPYESWYEYRSWMRSGMGAFRTLKAATS VNAGILRMDHLIGTIEPGKLADISGWHRDLMEDCDALSECDFVMKDGNVYPAGNTVVDEY TV >gi|224461044|gb|GG657760.1| GENE 15 16349 - 16558 195 69 aa, chain + ## HITS:1 COG:no KEGG:CD1118 NR:ns ## KEGG: CD1118 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 60 1 60 324 95 85.0 8e-19 MAVFRVEKNKVYTVMSNHHLRNKELTLKAKGLLSQMLSLQEDRDYTLAGLSHINRVSTQS AQRKSNATK >gi|224461044|gb|GG657760.1| GENE 16 16775 - 16975 176 66 aa, chain - ## HITS:1 COG:no KEGG:ELI_1812 NR:ns ## KEGG: ELI_1812 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 8 64 13 69 74 69 64.0 5e-11 MKGVGKSFQVMDALIKTKPQDAPVYLFMDKKRAQGKPYYVYMTAGANKFLRIYNGRVKEY LSTLSE >gi|224461044|gb|GG657760.1| GENE 17 17568 - 17768 107 66 aa, chain + ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 65 1 65 72 57 41.0 7e-09 MHISYQPLWNLLKERNMRKEDLRLAAGLTTNMIANMGKGKHISMETLIKICETSDCDITD VIELEK >gi|224461044|gb|GG657760.1| GENE 18 17928 - 18413 156 161 aa, chain + ## HITS:1 COG:BS_ylaC KEGG:ns NR:ns ## COG: BS_ylaC COG1595 # Protein_GI_number: 16078537 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 2 160 5 167 173 66 29.0 2e-11 METVEEIYQNYSQRVYVFLLSKTNSHELAEELTQETFFYAVNAIDKFKGNSSVLTWLCGI AKNLWLKYLRDNKLNADILDFENVSQTISAEDEVFIQWENTEVLKLIHRLDEPIREVMYL RLIGELSFYQIGEIMGKKENWARVNFYRGKKRIIEEMNKNE >gi|224461044|gb|GG657760.1| GENE 19 18406 - 18900 199 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570754|ref|ZP_03779777.1| ## NR: gi|225570754|ref|ZP_03779777.1| hypothetical protein CLOHYLEM_06857 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06857 [Clostridium hylemonae DSM 15053] # 1 164 1 164 164 301 100.0 1e-80 MNDKIPCNIIHDLLPLYVDGLTTEETNGYIKEHLEKCSDCQKEYSVYKKELATLESITSN TEKKEVAYLKKINLYQKASLILGAIISFLLGACIPILKVGVPVILSGGIQEYQLARLRVA WSVGLMKMAISGLIVCAVYIIVMLMIKSVIKRKKINFNEKDAKC >gi|224461044|gb|GG657760.1| GENE 20 18994 - 19443 245 149 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1780 NR:ns ## KEGG: CDR20291_1780 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 54 148 145 268 268 137 64.0 9e-32 MLRGLASYESNDYKDINHGNLIALADFYGVTLDYLFCRTENREQINTPLTELHIIGRYRP GEDALYLKVLQAAHVDDDEYFSRMVLDDINLIIRDVRALHKKDSESAPLTTVADELKENL SEEEFRWLIRILQKSKKMRIPISQRKKRK >gi|224461044|gb|GG657760.1| GENE 21 19491 - 20090 558 199 aa, chain - ## HITS:1 COG:TM0656 KEGG:ns NR:ns ## COG: TM0656 COG1396 # Protein_GI_number: 15643421 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Thermotoga maritima # 24 192 3 172 176 95 35.0 6e-20 MKEFCSVCCGRKGAWKELNDIQLIGYSIRSQRRKKGMTLQQLSEATGLSIGYLSNLERNA NSPTLVNIQKICEAFGTSLFSLLEMNKEEDIIVRHNEREPIISEEHNMKLENIDFGLDDT SFIYMTIEPDGAGDGLWWEHEYHEVGTVIKGRLTLKLDNQVFELDEGDTILIKAHTRHCY YNKTQESCVSYWTRCKEIK >gi|224461044|gb|GG657760.1| GENE 22 20099 - 21370 1594 423 aa, chain - ## HITS:1 COG:BH0634 KEGG:ns NR:ns ## COG: BH0634 COG0151 # Protein_GI_number: 15613197 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Bacillus halodurans # 1 422 1 419 428 389 49.0 1e-108 MKVLIVGSGGREHAIAYSVAKSDKVDKIYCAPGNAGIAELAECTPIGAMEFDKIVAFAKE KEIDLVIVGMDDPLVGGLVDELEAAGIRAFGPRKNAAILEGSKAFSKDLMKKYNIPTAGY ENFEDPDEALAYLKTAKFPIVLKADGLALGKGVLICGTYEEAEAGVKTIMVDKQFGTSGN TMVVEEFMTGREVSVLSFVDGNTVKTMTSAQDHKRAGDGDTGLNTGGMGTFSPSPFYTKE VEEFCGKYIYQATVDAMKAEGRPFKGIIFFGLMLTEEGPKVLEYNARFGDPEAQVVLPRM KNDIVEVMEACVDGTLDKIDLQFEDNAAVCVVLASDGYPVKYDKGLPVTGLEEFRKHDGY YCFHAGTKFDGEQIVTNGGRVLGVTAKGRDLKEARANAYAATEWVKFDNKYMRHDIGKAI DEA >gi|224461044|gb|GG657760.1| GENE 23 21441 - 22178 820 245 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570758|ref|ZP_03779781.1| ## NR: gi|225570758|ref|ZP_03779781.1| hypothetical protein CLOHYLEM_06861 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06861 [Clostridium hylemonae DSM 15053] # 1 245 1 245 245 402 100.0 1e-110 MKRKRLWMILAAFMLSAALAGCSGGSSGKEDKSQKQEEKKEQDEDKQKEDVKEEVKEEVK EYAPGTVDGNHYESEWMNVRIDLPEGFVMATEEEIANIQEAGVQFLDDEEKDKLNNALDE GTTFYEMMAATLTGSPNVNISVEKLPYKNATAEQYADVTKEVVEKSMTNGMTASFQEGTT DAVLGGQEYKCIAGTANVQAEGVSADLNMDMYIRVQDGYAIVVNITYTADTVAQKDELLA AFQEF >gi|224461044|gb|GG657760.1| GENE 24 22216 - 22842 666 208 aa, chain - ## HITS:1 COG:CAC1394 KEGG:ns NR:ns ## COG: CAC1394 COG0299 # Protein_GI_number: 15894673 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Clostridium acetobutylicum # 1 206 1 202 204 209 52.0 4e-54 MLNVVVLVSGGGTNLQAVIDAVDSGAVANTKIAGVISNNKNAYALQRAKDNGIPGVCISP KEFASRDLFNVKFLEAVDEMRPDLIVLAGFLVVIPPAMIEKYRNRIINIHPSLIPSFCGT GYYGLKVHEAALARGVKVAGATVHFVDEGTDTGPIILQKAVDVEPGDTPETLQRRVMEQA EWKILPEAIGLIAAGRVSVKDGRVQIKA >gi|224461044|gb|GG657760.1| GENE 25 22836 - 23861 832 341 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 [Marinobacter sp. ELB17] # 1 334 8 336 354 325 49 2e-87 MDYKNAGVDIEAGYKSVELMKEHIKNTMRPEVLTNIGGFSGAFSMEAFKGMEKPTLVSGT DGVGTKLKLAFLLDKHDTIGIDCVAMCVNDIACAGGEPLFFLDYIACGKNEPEKIAAIVS GVADGCVQSGAALIGGETAEMPGFYPEEEYDLAGFAVGVVDEKDLITGKELKAGDVLIGM ASSGVHSNGFSLVRKVFDMTKESLNTYYDELGATLGEALLAPTKIYVKALSAVKSAGVKV KACSHITGGGFYENIPRMLCDGVNAVVEKDSYPVPPIFRMLAREGQIEEKAMYNTYNMGI GMIVAVDADDVDKTMQAVRAAGEEPYVVGRIEAGEKGVTLC >gi|224461044|gb|GG657760.1| GENE 26 23873 - 24385 662 170 aa, chain - ## HITS:1 COG:TM0446 KEGG:ns NR:ns ## COG: TM0446 COG0041 # Protein_GI_number: 15643212 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Thermotoga maritima # 1 169 1 169 171 192 57.0 2e-49 MPKVGIVMGSDSDMKVMSKAADMLEKLGVEYEMTIISAHRMPDIFYDYAKSAEEKDYKVI IAGAGMAAHLPGMCAAIFPMPVIGIPMSGKNLDGQDALYSIVQMPPGIPVATVAIDGGAN AAILAAKILATSDPELLGRLKAYSEEMKETVQAKSEKLDKLGYKEYMKQM >gi|224461044|gb|GG657760.1| GENE 27 24464 - 26512 2330 682 aa, chain - ## HITS:1 COG:no KEGG:Closa_1605 NR:ns ## KEGG: Closa_1605 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 2 679 14 690 691 738 55.0 0 MIEERYELATERIRSICEEDTAADTFRGYFRHVARFIVMLDELNSEMEKGVYAQAPLDHL KRWNERLYADILPEHYGTSYANPDYAAEKLGEEYGQILSFLYTEIRGAVAYVFERKKEYL DILYELFIEIYNAFEEKEAPETAALKDIVYWYASDYSDVFAADRIREQTDPAASFAADII MNSDLTDLRYLYRFGEYISENEWKTAEHLNSLGASVIRKMADTFTEGYRMGFINTGKDLS VKSVVNIRYVLGFERVIRQAAENFTGMGLKPVIYRSGVSVLTKRQHLKTGYYGAIANKQY EYDHRNDQGLFLDKKFVERKLEVIQSAYEQNKELAAGFAGPACMDVFGERPFVPKQKDTA VKLTKKQEELALLFDSRSAQITNTYIKGEERSFTIVAYPVPEIGSQYKEIFDEIIRINTL DASLYAKVQQTLIDALDRGKYVKIKGKGVNKTDLTVQLHRLADPQKETIFENCVADVNIP VGEVFTSPVLEGTDGVLHVSRVYLNELLYKDLKLTFSNGMIADYTCGNFERELENKEYIH DNILHRHSTLPLGEFAIGTNTTAYVAARKYRMEDKLPILIAEKMGPHFAVGDTCYSWSED IKVYNPDGKEIVARDNSVSVRRLNDVSKAYFHCHTDITIPYDELGSITAVTADGEEIRLL EDGRFVLPGTEVLNEPLEKYNN >gi|224461044|gb|GG657760.1| GENE 28 26513 - 26911 451 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570763|ref|ZP_03779786.1| ## NR: gi|225570763|ref|ZP_03779786.1| hypothetical protein CLOHYLEM_06866 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06866 [Clostridium hylemonae DSM 15053] # 1 132 1 132 132 217 100.0 2e-55 MIIKRKQKDKEESSAKDKQKEREKRRRKMMRGKYGQAPLKHARKGINSCCYAGTVFLILM AMLVFSYVSKGSVNVIAGFAGLAVIILAWLGLMSGIRGFREREKNYITCKVGVVSNVLLL LGLISIFFRGLF >gi|224461044|gb|GG657760.1| GENE 29 26871 - 27359 335 162 aa, chain - ## HITS:1 COG:CAC0829 KEGG:ns NR:ns ## COG: CAC0829 COG4767 # Protein_GI_number: 15894116 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Clostridium acetobutylicum # 16 140 18 146 308 81 37.0 6e-16 MNAKNRKRIRVIGKILFVFYIAFLVYFLLLSDWYGRTGVMQEYRYNLVLFREIKRFWEYR EQLGMFAMFTNLFGNVLIFMPFGFFMPMASRHRSFFSALFYSFGLSLCVETFQLVTKVGS FDVDDLLLNTIGGVLGYIIFAICAAVRRRYDHKKKAKRQRRK >gi|224461044|gb|GG657760.1| GENE 30 27385 - 27537 191 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEKAYKTMSFAGAAGIVTGIVVLVAGVAAGVIMIVSGARLLKDKKGLTF >gi|224461044|gb|GG657760.1| GENE 31 27552 - 28226 990 224 aa, chain - ## HITS:1 COG:CAC0027 KEGG:ns NR:ns ## COG: CAC0027 COG0461 # Protein_GI_number: 15893325 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 224 1 224 224 306 66.0 2e-83 MEQYKKEFIEFMIDCEVLKFGDFVTKSGRNTPFFVNTGFYRTGAQLRRLGEYYAKAIESS FGFDFDVLFGPAYKGIPLTVAATMAISEFYGRDIRYCSNRKEVKDHGDKGILLGSPITDG DRVVIIEDVTTAGTSIQETLPIIKAQGDVTPLGLVVSVDRMERGQGDKSALAEIEEKYGL KTTAIVTMEEVTEHLYNRPYKGKVIIDDTLKSAIDAYYKQYGVK >gi|224461044|gb|GG657760.1| GENE 32 28242 - 29144 1118 300 aa, chain - ## HITS:1 COG:BS_pyrD KEGG:ns NR:ns ## COG: BS_pyrD COG0167 # Protein_GI_number: 16078618 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Bacillus subtilis # 4 297 3 297 311 320 55.0 1e-87 MDTKVNLAGVELKNPVMTASGTFGSGEEYSEFVDLGRLGAVVTKGVANIPWPGNPVPRIA ETASGMMNAIGLQNPGIDLFCRRDIPFLKQFDTKIIVNVCGRTTEDYCEVVERLAEEDVD MLEINISCPNVKEGGIAFGQNPKAVEEITAEVKKRAKQPVIMKLSPNVTDITETARAAEA GGADVLSLINTLTGMKIDIHRRTFALANKTGGLSGPAVKPVAVRMVYQAANAVKLPIIGM GGIATAEDAIEFLLAGASAVSVGTANFYDPSATVRVAEGIEAYMKRYGFEHVSELTGLVK >gi|224461044|gb|GG657760.1| GENE 33 29144 - 29917 867 257 aa, chain - ## HITS:1 COG:FN0423 KEGG:ns NR:ns ## COG: FN0423 COG0543 # Protein_GI_number: 19703765 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Fusobacterium nucleatum # 15 257 13 258 259 195 45.0 8e-50 MSKYKGQAAVISQEQAAADIYSLWIEAPLIAAEAKAGQFLSLYTQDESRLLPRPISICEI DKEKGRLRLVYRVTGSGTGTEQFARLRAGDAVEVMGPLGNGFPLENPGKAFLIGGGIGIP PMLELAKQLPGDRQIIAGYKDELFLTKDLKKYGELYVATEDGSAGTKGNVLDAVRENGLL ADVIYACGPAPMLRALKAYAKEHGIVCYISLEEKMACGIGACLACVCQSKEKDSHSNVHN KRVCKDGPVFLSTEVEI >gi|224461044|gb|GG657760.1| GENE 34 29910 - 30836 1195 308 aa, chain - ## HITS:1 COG:CAC2652 KEGG:ns NR:ns ## COG: CAC2652 COG0284 # Protein_GI_number: 15895910 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Clostridium acetobutylicum # 1 305 2 286 286 210 39.0 3e-54 MINQLVSNIKKTGAPVVVGLDPMLSYIPEHVQKKAFAEYGETLEGAAEAIWQFNKAIVDS TCDLIPAVKPQIAMYEQFGIPGLAAFRRTTEYCKEKGLVVIGDIKRGDIGSTSKAYAVGH LGKVQVGNNTCVPFDEDFVTVNPYLGSDGVDPFLEVCREEKKGVFVLVKTSNPSSGEFQD QLVGGRPLYELVGEKVAAWGEELMGDDYSYVGAVVGATYPEMGKALRAVMPKAYILVPGY GAQGGRGKDLVHFFNEDGLGAIVNSSRGIIAAYRQEQYARFGEANFADASRAAVEDMIKD IKGALEHE >gi|224461044|gb|GG657760.1| GENE 35 30849 - 32135 1242 428 aa, chain - ## HITS:1 COG:lin1951 KEGG:ns NR:ns ## COG: lin1951 COG0044 # Protein_GI_number: 16801017 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Listeria innocua # 4 423 3 420 426 348 45.0 1e-95 MKILIQNGHVIDPPTGKDGIFDVLIVEDKIVKVERRIEDRADRVIDAGGCYVMPGFIDLH VHLRDPGLTHKETLETGGKAAVKGGITTMCAMPNTKPVIDDGEKVAEVHARAAKESPAHV IQIGAVTKGQLGRELADIEGMAKAGCHAISEDGKSVMNASIYRRGMKKAKECGISVFAHC EDITMVEGGVMNADGNATRLGLKGITNSVEDVIVARDILLAKETGARLHLCHCSTADSVE MIRLAKEDGLPVTGEVCPHHFILTADDIPADDGNYKMNPPLRGRADVEALREGLKNGIMD VISTDHAPHSAEEKNRSMAEAAFGIVGLETSAALTYTELVEPGILTMTDMAEKMSTNPAR ILGLLDKGSVSEGKTADIVIFDTRQEYTIDKDTFVSKGKNTPFHGRKVRGTVRYTLADGA VVYENEIH >gi|224461044|gb|GG657760.1| GENE 36 32231 - 33415 1512 394 aa, chain - ## HITS:1 COG:CAC0499 KEGG:ns NR:ns ## COG: CAC0499 COG0793 # Protein_GI_number: 15893790 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Clostridium acetobutylicum # 29 394 27 402 403 254 43.0 2e-67 MKKNKGFIKGALCGALAVLLIAGIVSCAGKKNVLSAGGDKIVDSKTEEKLSQLQGLIDGK YLGDVDEDALQSGIYKGYINGLSDPYSVYYDKEETEQLLETTSGEYSGIGAVLSQNRDTG IITILQVYDDSPAQKAGIQDNDILYKVDGEEVTGIDLTEVVSGIKGEEGTEVKLTVLRGD AKDEVEVTAVRGKVEAQTVKYEMKEDQIGYIRVTEFDSVTYDQYKEAIDDLEGQGMKGLI VDLRNNPGGNLSTVCDMLDLMLPEGLIVYTDDKDGNRSEETSDEEHQFKLPMTVLVNGNS ASASEIYAGAIQDYSLGEIIGTQTYGKGVVQQIFDLKDGTCVKLTIAEYFTPKGRNINGK GITPDVEVEFEADEADPEADNQLEKALEVIKGKM >gi|224461044|gb|GG657760.1| GENE 37 33432 - 34538 1363 368 aa, chain - ## HITS:1 COG:all7672 KEGG:ns NR:ns ## COG: all7672 COG0739 # Protein_GI_number: 17158808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Nostoc sp. PCC 7120 # 240 368 81 209 216 118 51.0 2e-26 MRGKRISSVLLVAVLCMGMAMQVNAASISDTKKKAEELESKKKAAENEKSSLAAQLESIV AEMEDTKVKIDEKETEIEKKEEELIQAKVDENDQYESMKKRIQYMYENGNSQFIEILVQS KSIGDFLNNAEYITTISEYDRNMLVEFQETVKKVEEQEKELKEEYDELETMQNDLIVKQD SVNTMLESKNAEISQLESEIGDTTDKLAELEAAAAAAARKQTEATQTYTGNAGASVASGN GMFTHPCPGYSYISSEFGWRAQPLPGASTNHKGMDFAAATGTPIYAAAAGTVVSAGYSGN AGNLIIINHGNGLQTYYMHCNNIYVRAGQTVSRGQNIAAVGTTGNSTGPHLHFQVMSGGI PVNPRNYF >gi|224461044|gb|GG657760.1| GENE 38 34559 - 35467 1075 302 aa, chain - ## HITS:1 COG:CAC0498 KEGG:ns NR:ns ## COG: CAC0498 COG2177 # Protein_GI_number: 15893789 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Clostridium acetobutylicum # 1 302 1 301 301 150 35.0 3e-36 MRISTVGYSMRQGVKNIRRNKMFSIASIATMAACIFLFGLFYSIVINFNYIVDKAEEGVA ITVFFKDDITQSQKDKVGEDLKKADGVLKVNYISADEAWDKFKGDYFGESDDLAEGFKSD NPLANSDNYEVYMSDVSKQKDVVSYAESLDGVRKVRKSDVVAKTLTSVNKLVGYVSAAII MILLIVSVFLISNTVTMGVTVRREEIAIMKYIGAKDGFVRAPFVIEGLLIGILGAVLPLI LLYFLYSKVIEYIMVKFSLLNNIVDFLPVMQVYKTLLPVGLALGVGIGFLGSFVTIRKHL KV >gi|224461044|gb|GG657760.1| GENE 39 35457 - 36143 336 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 216 1 218 245 134 36 8e-30 MIELKEVTKEYSKGVAALNGINLKIDQGEFVFIVGDSGSGKSTLIRLIMKELDPTSGTIV VNGQSLNRMRHRKIPMYRRGLGVVFQDFRLLKDRNIYENIAFALRVTEKPTRVIKKKVPA ALSLVGLAQKYKSFPKELSGGEQQRVAIARAIVNEPAILLADEPTGNLDPTNSWEIMKLL EEANERGTTVLVVTHNQEIVNEMKKRVVTMKKGVIVSDEKKGGYSNEN >gi|224461044|gb|GG657760.1| GENE 40 36161 - 37249 1253 362 aa, chain - ## HITS:1 COG:CAC3236 KEGG:ns NR:ns ## COG: CAC3236 COG2508 # Protein_GI_number: 15896482 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Clostridium acetobutylicum # 169 355 134 312 312 83 31.0 7e-16 MISNQILQNTIEGLKGITRIDFCVMDTDGKSLASTFSEQENYEEEVVSFVESPADSQVVQ GYQFFKIFDEHQLEYILLANGGGDDVYMVGKIATFQIQNLLVAYKERFDKDNFIKNLLLD NLLLVDIYNRAKKLHIDTEVRRVIFIIETKHEKDSNALDNVRTLLGNKSKDFVTAVDEKN IIVVKELEANDGHEELEKVAKELYELLKEDGEEDILIAYGTIVNDIKEVSKSYKEAKLAL DVGKIFFGEKNIMAYSALGIGRLIYQLPIPLCKMFIREIFEGKSPDDFDEETLTTINKFF ENNLNVSETSRQLYIHRNTLVYRLDKLQKSTGLDLRVFEDAITFKIALMVVKYMKYMESL EY >gi|224461044|gb|GG657760.1| GENE 41 37464 - 38162 889 232 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0711 NR:ns ## KEGG: EUBREC_0711 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 212 1 212 227 79 26.0 1e-13 MNDKISVLDIDIDNYTAKEAMKETVSYMESDPVNVVELVTVDGLMQMDEVPELKDDIRKF DLVLAGDKTILEAAEITDRRTIQETEGHVFLKMFFRYIHKNHKRVYLLVESEDEGEHLYN YLEHSYSGSQIVGLAKVSALNRADDMLVNAINGGEVDCVISVLSSPLQEEFIAKNRGILN IRIWLGLGKGILPVGRTGFGQGRITQFLLKRIFKKEIEKRKRDMSGALVSAK >gi|224461044|gb|GG657760.1| GENE 42 38272 - 38466 294 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570778|ref|ZP_03779801.1| ## NR: gi|225570778|ref|ZP_03779801.1| hypothetical protein CLOHYLEM_06881 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06881 [Clostridium hylemonae DSM 15053] # 1 55 1 55 64 85 100.0 2e-15 MSGKKNKPINLQELTDEEKVKYEIAEELGLLDKVMADGWRSLSSKETGRIGGLITKKKRE KEKK >gi|224461044|gb|GG657760.1| GENE 43 38637 - 38828 354 63 aa, chain - ## HITS:1 COG:MA4106 KEGG:ns NR:ns ## COG: MA4106 COG1983 # Protein_GI_number: 20092899 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 4 61 2 59 59 75 60.0 2e-14 METKRLYRSRENRMICGVCGGVADYFNVDPTLIRLGLVLLACTGTGILAYFIAAIIVPDQ PQT >gi|224461044|gb|GG657760.1| GENE 44 38873 - 39706 1155 277 aa, chain - ## HITS:1 COG:no KEGG:Trebr_2048 NR:ns ## KEGG: Trebr_2048 # Name: not_defined # Def: hypothetical protein # Organism: T.brennaborense # Pathway: not_defined # 51 274 58 283 287 93 29.0 8e-18 MRRGWKIFWIICAVVAVTGFACCMAALGLGVTVEAIEDRFPNGIGIVKDNDWHHSGKTYT GDVDESETFSKEQIREIDAHISGGELQVLQSDTDEIKIETSGVDSRLKLKYYVEDGELKI ETKKHIWGLNGGKHIGTIYLFVPKDCQFEEVNFEVGAGYLYVEDILANSLEIEVGAGAAD VDSFHAGEASLDCGAGKITASGLADWELDIDCGIGEIDLDVNAKMEEYNYYIKCGIGQVD VGDDYYSGLGAKKTIENNSGKDMNIDCGIGKVSVDFY >gi|224461044|gb|GG657760.1| GENE 45 39710 - 40396 885 228 aa, chain - ## HITS:1 COG:SPy2173 KEGG:ns NR:ns ## COG: SPy2173 COG4709 # Protein_GI_number: 15675910 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 192 1 169 195 68 27.0 7e-12 MNRIEFMTELAALLQNVPVEERREAMQYYNDYFDDAGEENEQRVIEELGSPAKVAGTIKA GLSGDDGAQGEFSETGYRDTRFERRDVPAGREGYRYGDEEPPRTNRTLKIILIVAIIIVG APVVIPLAVGISAAVFACVAASFLFFLALVIASIAVAIAGISLLCIGIANLVPALAVGMA LVGTGLLLTVLGAIATVGTIRLCIIVYPGIIRGIVWILRRPFQGKVVA >gi|224461044|gb|GG657760.1| GENE 46 40393 - 40716 373 107 aa, chain - ## HITS:1 COG:SPy2172 KEGG:ns NR:ns ## COG: SPy2172 COG1695 # Protein_GI_number: 15675909 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 103 1 101 108 85 40.0 2e-17 MVFNTGAALLDAIVLAVVSREKEGTYGYKITQDVRQAIDVSESTLYPVLRRLQKDECLEV YDQQFDGRNRRYYKVTEKGMAQLNLYRVEWKNYSNKINELFEGGATA >gi|224461044|gb|GG657760.1| GENE 47 41192 - 41317 90 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVYGGAQQCTEPQQSGFASRESVTARSAGIRQSDLFGMKS >gi|224461044|gb|GG657760.1| GENE 48 41341 - 44955 4149 1204 aa, chain - ## HITS:1 COG:CAC2262 KEGG:ns NR:ns ## COG: CAC2262 COG1074 # Protein_GI_number: 15895530 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Clostridium acetobutylicum # 5 1204 8 1251 1252 751 36.0 0 MSVAWTEEQQKVIDLRKRNILVSAAAGSGKTAVLVERIIAMLTDAEDPVSVESLLIVTFT EAAAAEMKERIRDAIEKKISEDGENEHLKTQATLIHSAQITTIHSFCLSVIRDHFHAIDI DPGFRVAEEGELKLMKHDVLGQVLEDNYEEGGEAFQEFVEAYGSGRDDRKIEELVLKLYE YSRSYPDPGGWLQSCVDAYDIKNVEELESSTYMELIRRQIKLYMADAESLTEEALGVCME PDGPSVYEEALLADGGIVQSFLAAKSYEELYEASGRIKWTKLKANRDKTVSEEKAALVKA ARDEVKKTVNDVAAQYFYQAPDGVLEDMALCKKAMAVLASLVDQFAARFEEQKRTQNMID FSDMEQYALQILAVKEGDSFAPTAVAGEYQQRFREIMIDEYQDSNLIQETILTSVSTVSQ GKNNIFMVGDVKQSIYRFRLSRPELFMEKFHTYDTKDSSRQRIDLHKNFRSRSEVLETVN YIFEQIMTPALGGIRYDDEAALYTGADYGDGGEESSNNTEILLVDTDLSPFADDEKKEKK EAAPSDRELEARAIAGRIRKLLDTQKVLDKAAGTYRKARYSDIVILTRSVKGFSDVFSEV LNKEGIPTYAGTREGYFETQEIGVLLDYLRVLNNRKQDIPLAAVLKSPFLGLTDEEMADI KNKAGDLPFHEAVPAYASREETAAARRLKACLDMMEHFRKKVPYTPIHELLHMILKETGY GDYTAAMPGGEQRKANLKMLAEKAKAFESTSYKGLFHFIRYIEQLQKYDVDYGEASLEDE QSDTVRIMTIHKSKGLEFPIVFVSGMGKQFNMMDARSSVVLHARLGVGLDAVDTELRTKS PSLLKRVIQKEEALDSLGEELRVLYVALTRAKEKLIVTGAVKNAGKKMDSYGLTKRRSER QLSFTQLGRAGSYLDWILPAMMRRTEEIPVDIELVTAKDLVRESAGEYIRNRLTAEMLRR WDTERVYDGQMHTLIEEQFSYEYPYSLSKNRKLKYTVSELKKRAYMAEEAGELLYEEEEV VPLIPEFLKEGEELTGASRGTAYHRLLELLDFTADHADASLKAEIIRLRDEGKMTADMAE CIRTEDILGFLNCGAGRRMREAAGNQRLYKEQPFVLGTDAREMYPDEAEGELILVQGIID VYFEEADGLVVLDYKTDRVKSAGELKEKYHAQLDYYARALEQITGKHVKEKIIYSFALRE EIKV >gi|224461044|gb|GG657760.1| GENE 49 44952 - 48302 3324 1116 aa, chain - ## HITS:1 COG:CAC2263 KEGG:ns NR:ns ## COG: CAC2263 COG3857 # Protein_GI_number: 15895531 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Clostridium acetobutylicum # 1 1113 1 1145 1153 609 29.0 1e-174 MPLQFIFGPSGSGKSTYLYERVIEESQRYPEQKFLVLVPEQFTMQTQKDLVSMHPNKGIM NIDVLSFGRLAYRVFEETGGGALPVLDDEGKNLILRRIAGSYEDKLKVLKGNMKKLGYIS EVKSVISEFTQYDIGEEELERVMETAGPDSRLYYKLKDILLLYKGFSEYLEEKYITKEEL LDVLSRMAGQSELLKDSTVVLDGFTGFTPVQNRLLLELMRCCRDVIVTVTMDDREDPYVY THPYQLFAISRQMVTSLIRIARESSIEVKEPVCLYSRPLPRFRGNDALAFLERSLFRYGQ SVYGGEQEAVSVHAARNPEEEALAVAGRVRNLVRTKGYRYREIGVIASDMNTYGDYLEQA FDMYGIPVFMDHKRSILLNSFVEYIRSLLHMVQQRFSYESVFRFLRTDLAGFTGEEVDEL ENYVLGLGIKGYRKWQEKWVRRLKGMKEEDLGRLNHYRTVFVEKVDGFNYVLRQRKKTVR DITMAVYDFMVQEELQVKLKRQEEAFQRSGELALAREYAQVYRIVLELFDKFVALLGDEP VSLDEYIKLLDAGLEEARVGVIPPSPDQVVAGDVERTRLKDIKALFFVGANDSFLPGALG QGGLLSEHDRQQFSKEKLALSPGSKEKAYIQKFYLYMNLTKPSDLLEVYYSKVSSDGRSS RPSYLIQELRRLFPHLSVEDEEEKELHLQEMTKETAVSRLIDGLGSADIQADAGWKELFS WYRRSPEFKDRLERLIEAGYYTYTMDGLTRSAAKRLYGDTFEDSITRMERYSTCAFAHFL TYGLGLTERQEYEFQAVDLGNVCHSALEKYSKRVEEAGRDWTDISDGQQREWVEQSVEEA VTDYGNSVLYSSARNEYMIGRMKRMLSRTIWALTEQLSAGDFKPAGYELRFANGKIDRVD TCEDGGKIYVKVLDYKTGMKAFDIVSLYEGLQLQLMVYMDAAVKLEQRRNPGKEVVPAGV FYYRIQDPLVEKSEGEEERREAVLKELKPDGIMSQEEEVLSHLDRDRSGESIAVPVKYNK NGSLAKGSKTVPGEDFRALMEYAVGKVSAVHQEITEGNTAVRPYRKGQETGCDYCKFRHV CGFDLKVPGYAYRELDKMSREEAVAAMKREKGEGEK >gi|224461044|gb|GG657760.1| GENE 50 48330 - 49187 1040 285 aa, chain - ## HITS:1 COG:alr4841 KEGG:ns NR:ns ## COG: alr4841 COG0253 # Protein_GI_number: 17232333 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Nostoc sp. PCC 7120 # 7 277 5 275 285 251 47.0 9e-67 MKVVLERYHGLGNDYVVFDPNKNELGLTPENVRMICDRNAGLGSDGVLEGPVMKEEGMFV KVWNPDGSESETSGNGVRIFAKYLKDAGYVQKKHFRLFTEHGPVEVAFLNEDGSRLRVSM GKLSFYSDDIPVTGERREVINEDMVFGRTLYPVTCVTIGNPHCVIPMREISKPLVCKIGD YAEIARYFPNRINTQIMQVIDKENIAIEIYERGAGYTLASGTGACAAAGVAYKLGMTNNK VIVHMPGGELQVEVEDDWNVYMTGDVFYVAKITLSNEFVEKLRSV >gi|224461044|gb|GG657760.1| GENE 51 49355 - 50200 693 281 aa, chain + ## HITS:1 COG:CAC2818 KEGG:ns NR:ns ## COG: CAC2818 COG2207 # Protein_GI_number: 15896073 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Clostridium acetobutylicum # 6 275 4 274 279 223 41.0 3e-58 MGQYEKRGYLNSEFRLFHLTDTETKEIEYHYHEFDKITILIRGRVNYIIEGKSYELKPYD IVLVKHNDIHRLVVDNHFPYERIIVYISPNFMNAYKTEDYDLNCCFLKAEKAGTNVLRIP SLEKSSLFRSITRLERSFSDDAYAAALYRQVLFIEFMIHLSRAAQGDHLEFIDTDACNPK IIDILEYIGSHLSDELTIDGIAGTFFISRYYMMRLFKQETGCTIGNYISQKRLLLGRELI LSGTSAAQAAYECGYKDYSTFQRAYKALFKESPRDTLLTLS >gi|224461044|gb|GG657760.1| GENE 52 50146 - 51420 660 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 23 396 26 407 425 258 41 2e-67 MIDLKEEIERIILVGVSVSDQDDTEKSLDELAELAAAAGAETAGRIIQSREQAHPATYIG KGKLEELKDLIWETYATGIICDDELSPAQMGNLQDELDVKVMDRTLVILDIFASRASTSE GKIQVELAQLKYRQSRLTGFGKSLSRLGGGIGTRGPGEKKLEMDRRLIKGRIAQLNRELR DVKRHREVTREQRSRNQVPVAAVVGYTNAGKSTLLNALTGADILAEDKLFATLDPTTREL KLPSKQSVLLTDTVGFIRKLPHHLIEAFRSTLEEAKYADMILHVVDTANPQMDEQMHIVY ETLRSLGVKDKPVITVFNKQDKEGAQRTVRDFQADYTVRISAKTTEGLDELKEMIEAVLR GQKVLIEQLYSYKEAAKIQLIRKYGELTAEEYREDGIFVSAYVPVSIYDKVRSVSLGDSL NNAL >gi|224461044|gb|GG657760.1| GENE 53 51426 - 51953 653 175 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2423 NR:ns ## KEGG: EUBREC_2423 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 23 174 174 320 320 67 31.0 3e-10 MKKYMVILSAAAVSAVLTGCVKNYAEEGVKYLEKGKYKEAAEQFEKAVEADRNVGDAFRG IGMAKWEQEDYEGARDAFKEALDNGAEKTGAIYNLLGSCEMKLNDPQGALSYYRLALSAE DSSEDLLKEVKYNMIAAYEQSKDWESARAKLKEYIAEYPDDETAGKEAEFLETRQ >gi|224461044|gb|GG657760.1| GENE 54 51962 - 53824 2326 620 aa, chain - ## HITS:1 COG:BS_yvgW KEGG:ns NR:ns ## COG: BS_yvgW COG2217 # Protein_GI_number: 16080402 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 32 617 112 698 702 511 43.0 1e-144 MTRQLKQRLLIYGAGVFVYVCAVAATIQYTLSDWVKFILFLTAYLVVGFDAFRQLAEHLM KKEIFSEYLLIILATTGAFGVQRYTEGVLVMLLFELGMMFEAVSTDSARRSIEQMIDIRP EYATRKVRGKETRVEPSELKLRHIIVVKPGERIPVDAVVTVGTSTVDTKALTGEYMPQTV EPGDEIYGGCINLSGVIEARVSRIYQNSTVSKVMEMVEEAQNNKAESETFVTKFSRVYTP VMIVCALFIMIYPSLTFSYGNWDTWIYRGLIFLVVACPCGLVLSVPLAFLAGIASAARQG IVVKGGNYLEFLSKADTFIFDKTGTLTEGVFKVKEIKAEGMTENELLEMAAHVESYSNHP IAKSLLAAYEGKLDRSRVRRVKEAPGFGISATYDGKRVHIGNYRMLEKQNIEHSRIKRTG TVIYLVADKKYAGYIVIADSVKEDAGPLMQYLKEKCRAVLVMLTGDNEASGMEVAEALDM DYAYTDLMPEDKLEQIEDFLGLQDKTEKVVCVGDGINDAPILARADVGIAMGALGSAAAI EAADIVLMEDELIRIKDAIRISKETLRVVSQNIAFSVGMKIIILLLAAVGYFGMWEAILA ELGVMFAAILNAVWVVKYTV >gi|224461044|gb|GG657760.1| GENE 55 53856 - 54215 360 119 aa, chain - ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 6 119 8 121 122 132 56.0 1e-31 MRKPEAECCEVTCIHDDVISRVSRQMPPQERMKELADFYKVFADATRIRILCVLLESEMC VCDLAEVLQMTQSAISHQLRVLKQAKLVKNRRDGKTVYYSLADGHIQTIISQGMEHITE >gi|224461044|gb|GG657760.1| GENE 56 54385 - 56787 2444 800 aa, chain - ## HITS:1 COG:CAC2241 KEGG:ns NR:ns ## COG: CAC2241 COG2217 # Protein_GI_number: 15895509 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 97 798 3 699 699 567 43.0 1e-161 MLAAERKAFDECGCGHGLHGHDGQNEHDHDRGHGHTEECHEHHEHIDEAHNHIGHSHAHE CGGQDHAGHDHGGHQHDGSCGCGHEEAHTGQEFAQVSAGVPQKVYILENLSCANCAAKME EQIRKMPEVEMATITYATKQLKVAAREQEKLLPTFREICRSIESEVTVTPRDEIQSQPKQ ERSGFFAENRADVLAIAGGAVLFVAGEVLERTAADPVIASAAFIVAYILLGWEIVFTAVK NLSKGHVFDENFLMSVATLAAFAIGDFAEAVGVMLFYRVGELFEHIAVERSRSQIMDAVD LRPEVVNLVHGEAVDVIPAETAEAGDLILVRPGDRIPLDGKVEEGESRIDTSPVTGEPVP VSVKPGMDVVSGCVNEQGVLKIRVEKPLSESMVTRILDSVENAAASKPKIDRFITRFARV YTPIVVAVAAATAVIPSLVTGDWNHWIYTAITFLVISCPCALVLSVPLAFFSGIGAGSRQ GILFKGGVAIEALKSVKAVVMDKTGTITKGNFEVQQATATGRFTEKQVLNIAADCELDSS HPIGNSIVKAAREMKLALVRPKRSEEISGKGVRALFPEGEVLCGNKALLEMHGVDTSAYH NKGYGTEVLVAVGGELAGWLVIADIIKEEAKEAVGMLKARNLVTAMLTGDAKDSAKAVAA RTGIDEVHAQLLPEEKLDHLRQIRRKHGSVMFVGDGINDAPVLAGADVGAAMGSGADAAI EAADVVFMTSSVTAIPESVAIANATGKIAMQNVVFALALKLLIMILGFAGMANMWMAVFA DTGVAMLCVLNSIRILYKRV >gi|224461044|gb|GG657760.1| GENE 57 56857 - 56919 58 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYENQNLLLTFLKKYDYIRV >gi|224461044|gb|GG657760.1| GENE 58 57052 - 57582 515 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570796|ref|ZP_03779819.1| ## NR: gi|225570796|ref|ZP_03779819.1| hypothetical protein CLOHYLEM_06899 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06899 [Clostridium hylemonae DSM 15053] # 1 176 33 208 208 315 100.0 1e-84 MELKQTRTLMDVRRGFLMTVLSVSVVAILIAGIVSNYFFYSIPIFTICVFAIFIVMLSIF YDIYINSTYRIFLVDGDVYIYYPTYSSRAGNEFIFYRVKEVDYSTVKGSSILFSGTVEVR TEGVEREGMKEVADPEALFKDVFSGETYNIQKRFRISRIFENENELMGLLAEKRKK >gi|224461044|gb|GG657760.1| GENE 59 57672 - 59099 678 475 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 4 465 3 448 458 265 33 2e-69 MEQQYDLLIIGAGPGGYVAAKKAAKLGMSVAVIDKGELGGTCINRGCIPTKALIHAASLY REMRECERFGLSAGEVGFDLQKIYEYKDLSAAEMRAELGREFDGAGIRFIQGKAVIQSDR RVRVVSDENDTAYYKGKYILIATGARANMVDLPGMDLPGVMTSEELLTANESQYEKLLIL GGGVIGLELATVFNALGTEVTVVEVSDRLLPNMDREFSDVLEEILGHRGIHIYKESILER VEKRGDNISCQFVCGGSNREVEVNALLVSVGRSANTEGLFDPDVSVKTDKGKIVVDDFYM TSMPDVYAVGDVIGGIQLAHVASAQATYVVERMNGVQPSVIIEMVPSCLFTPISIVPSCL YTDPEIASVGITEEEARKKGVPVRCGRYTMSVNGQAIISKEEKGFIKVLFAADSDVLLGA QVMCPRATDMIGELATAIANGLTSTQLMYAMRAHPTFNEAISCAVENSRESESRW >gi|224461044|gb|GG657760.1| GENE 60 59127 - 59795 896 222 aa, chain - ## HITS:1 COG:lin1190 KEGG:ns NR:ns ## COG: lin1190 COG0692 # Protein_GI_number: 16800259 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Listeria innocua # 1 221 1 221 224 282 61.0 3e-76 MAAINNDWLEALRGEFKKPYYKELFQKVNEEYKTRLIFPPADDVFNAFHLTPLKDVKVVI LGQDPYHNNGQAHGLCFSVKKGVEVPPSLVNIYQELHDDLGCTIPNHGCLTKWAKQGVLL LNTVLTVRAHQANSHRGIGWEEFTDAAIAALNAQDRPIVFILWGGPAQRKKAMLNNPKHL ILESPHPSPLAAYRGFFGSRPFSRTNEFLKENGLEPIDWQIE >gi|224461044|gb|GG657760.1| GENE 61 59863 - 60624 876 253 aa, chain - ## HITS:1 COG:CAC0941 KEGG:ns NR:ns ## COG: CAC0941 COG0107 # Protein_GI_number: 15894228 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Clostridium acetobutylicum # 1 253 1 253 253 328 66.0 5e-90 MHTKRIIPCLDVNNGRVVKGVNFVDLRDAGDPVEIAKAYDAAGADELVFLDITASSDARS TVVDMVRKVAETVFIPFTVGGGIRTVEDFKALLREGADKISINSSAINTPDLISEAAGKF GSQCVVVAIDARKRADGSGWNIYKNGGRIDVGIDALKWAARVEELGAGEILLTSMDCDGT KGGYDLELTRAVADAVSIPVIASGGAGTLEDFHRALTEGKADAALAASLFHYKELEIREV KEYLKEKGVSVRL >gi|224461044|gb|GG657760.1| GENE 62 60638 - 61243 675 201 aa, chain - ## HITS:1 COG:CAC0939 KEGG:ns NR:ns ## COG: CAC0939 COG0118 # Protein_GI_number: 15894226 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Clostridium acetobutylicum # 2 201 5 202 203 199 49.0 2e-51 MIAIIDYDAGNIKSVEKAMSLLGQEAVVTRDKETILSADKVILPGVGSFGDAMEKIRQYG LEPVIRQVAGSGTPFLGICLGLQLLFEESGESPGVPGLGILKGKIVRIPESEGRKVPHMG WNSLEFPVKGRLFHGLSGEPYVYFVHSYYLEAADEQIVTAVTEYGVRIHASVEQGNVFAC QFHPEKSSDTGIHILKNFVEL >gi|224461044|gb|GG657760.1| GENE 63 61283 - 62749 1770 488 aa, chain - ## HITS:1 COG:CAC2434 KEGG:ns NR:ns ## COG: CAC2434 COG0642 # Protein_GI_number: 15895699 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 487 3 491 492 242 30.0 2e-63 MKRSIKKQMTAVFVGLTVCLLFALIVLNIRFLEPYYISNKESEFVNMYEKLAESVHSGTW KSEDTQTELRHMAEKGNLSYLLMNVETKEGIFNVPDIDMLNDQLTGYLLGQAQKESKVLE SARDYQIAQYKDPRTQTEYIVLWGAIDGTYNTFLRSPLESIKESVAVSNRFLLYIGGAVT CICICLVWYFSKRLTDPIKELALLSDKMADLDFNAKYKSGGENEIGELGANFNRMSEKLE STISELKSANNSLQKDIERKEKLEQMRSDFLGNVSHELKTPIALIQGYAEGLKEGVSDDA ESREFYCDVIMDEAGKMNQMVRNLLTLNQLEFGDEDIQFERFDVTELIQGVLQSMEIMAQ QKEARVNFIQEAPVYVWADELKVEQVVRNYVSNAFHHLDGDNVVEVKITVTDEKARISVF NTGAPIPQEDIAHIWDKFYKVDKAHTREYGGNGIGLSIVKAIMESFHQKYGLNNYDNGVE FWFELDVK >gi|224461044|gb|GG657760.1| GENE 64 62750 - 63430 950 226 aa, chain - ## HITS:1 COG:CAC2435 KEGG:ns NR:ns ## COG: CAC2435 COG0745 # Protein_GI_number: 15895700 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 6 226 5 224 224 239 53.0 2e-63 MDKVKILVVDDESRMRKLVRDFLGREGYTVLEAGDGMEAMEIFYEDKEIALVILDVMMPK MDGWQVCREIRQSSQTPVIMLTARSEERDELQGFELGVDEYISKPFSPKILVARVEAILR RSHVLGAEEIIDAGGIQINKAAHEVKAEGKQIDLSYKEFELLVYFVENEGIALSREKILN NVWNYDYFGDARTIDTHVKKLRNKLGDKGNYIKTIWGMGYKFEVEE >gi|224461044|gb|GG657760.1| GENE 65 63592 - 68952 4356 1786 aa, chain - ## HITS:1 COG:no KEGG:SpiBuddy_2449 NR:ns ## KEGG: SpiBuddy_2449 # Name: not_defined # Def: cell wall/surface repeat protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 1328 1738 147 512 1444 98 28.0 2e-18 MRRIKGKIAAFMAVLVMVSMLVSLPGPVSYAAPENTEDKEAQAASESSNAAAADNRHDAL SQEAYKEFGLPAGTIEEYTSDEHPLENYEPAPKSWLYMSYMNKTSKNNGQFAVLDSMKAL TEKNATLTDKNQKVTGNLDASPIVPYTDNAAASGSGSRIVGKNAVALADGMNDSTIVEMN LYYRETGTFSKTYESGFFFQTMKRQKNGAYLPLTSQNYDIKGGTAFKKLGSRAAAALTAM TAVDLDGDGVDELAVYTPYFTGPSITIFKQKSEKDRMTLEKIGEIPLKDLNTDSDAWQFD QGYGGENFPVVGLSTSSLAGAKEHLIITACCPASVANHSNVSALAIYSMDGGTLKKEYTA DMEFVELIKDIPTPYVYRYASAVQADVDGDGQDEIVLAGYNNGRDGYYLNMLTYDKGKYK KVNNTAFKISVSGDTSDITARQHFGMSEAVTLQAAKLNEKDDSDYIFLAGHVLKFKQGDT GDSLEDGEFDVVKSMDLSANKWGDFHFVSSAAVGRFAKDKGGSEQIAVVWQSYSKKDDVT MNISWLWADGTSVKQYNTNEKYLYERGALGYGSSIILCPVSDVNSAAYYQYEGKDFGWSA PQALAAIPAMPYWGELGAGGTPTVSFSVSRERTTGARGDVSLQGGFMAGFDAAAGAGLVG NGLAGGAGFDLEGLIGLAYEFSKTHTKGQERTITADAGRDSAVILSIPIVTYHYKRYLPE SKVTQQALDKIIKETGVAPYYENDPSRLIKAGDVIPAGWYSADTVIQFDEVYSSMYVDDY NKLCDKYSTASIPIEKIDMSELYSSDYRKGDPSTYPSQKEEIKSIGGKSAVVGPMAVKSN GGTVEMAFTQESALTSDFAFHLSVDGDIYGQAKGKFCLFANIEVEGKFGAAGVFDLQAGN VSVTTKGEGIKAQLVGPPTEKNFYSYEASLVAWNAAWGKDKKDTLLMVGPLADARKDIPL PPENPYVYEAGTDMALLGWDNSADNGLRQAEKYRVYQDTGGSHKTLVGEADRKENLFVVS GLTPGKDYTFYFTGVGAAPDSLESEYSMPLEVTTKTADSRIHIPADQPEDAYVKVGESAV FSVQNLTPPEGYELHYQWYEYIPDADTHMGDWQVAADNQISDTLTIDNVTAEMDNNKYRL EVQLRKKVPIGNAVTEETVYSRAASLHIGDDSRPSCEITSLTRDKGGADERELKPLKGTY YIAAGQMDKPVSIEASVKEKGGGAVTSGTVTFMYRKDGGTPQPLGGSLLLDGSGIAGTTW TPSEEGRYEFAAVYESDGGTQLVMSAPSVVRAGNLKDSFYLVRYVTDGGTKPPENPYGIS RTAGSTPLADASRDYYTFQGWYTKASGEGTKIEELNPEQIARELGGNGIVYTLYAYWEPI QYSIVYEHGHVTGTVQNPNPDSYTIQQYYDLKDPVLPGYEFKGWYEEPSYSTKVFSLPLG GESKDAAGSSTLYAKWEEQEYPIRYILNGFPLLTGPDTYKVTDLPLNLPNPEEPDAEKWR MKQNVPVNNGMQGEKRYVYKEWKDTQGNPITAIPEGTTGEFIVEAGYEREFTAVYLNEIG GEMQSGWYHIYYLHASSFPLTVPGQDDIHKKGFIFDGWYRKYNSTTGEYEDKREYMTYDE NVNNVMLYAKWVDDPNQVIVKYHLNYGGSTDYYLPADTYTVKGDTVDRPDDPERDGYTFT GWYLDKACTTEWDFGDKVPDDYENRTLVLYAGWEKNKGSDDTPGGGTVTPGNNGARPGAH TGGKNGGAGQAGARTGDTALPVMWGGIIMISAVVLFIILRRRKQDK >gi|224461044|gb|GG657760.1| GENE 66 69142 - 69924 642 260 aa, chain - ## HITS:1 COG:MTH1435 KEGG:ns NR:ns ## COG: MTH1435 COG0496 # Protein_GI_number: 15679432 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Methanothermobacter thermautotrophicus # 6 217 3 211 262 141 43.0 2e-33 MKRPLILITNDDGIHSPGLRAAAEAAADMADIVIAAPHTQQTGMGRAFPDTEDMGVIETE SMDIHGRTVRAYGVHGSPALAAAHGILELAGRRPDLCVSGINYGENMGAVLTCSGTLGAA FEAVSHNVPAIAVSLETDLKIQRSNDFQAADFGPAAEVLRTWTARVLEEGMPENVDILNI NVPAKPRSPGEYRITTQSRQNYIEFIRPGKRELDRPFSMKSRLYVDEETLERESDIYAVY VDKVASVTPLNIVMSVEMIP >gi|224461044|gb|GG657760.1| GENE 67 70015 - 71445 1839 476 aa, chain - ## HITS:1 COG:ygcE KEGG:ns NR:ns ## COG: ygcE COG1070 # Protein_GI_number: 16130683 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 476 1 477 492 558 57.0 1e-159 MSEKYIIGVDEGSQSAKILIFDTKGNIVCEGKHPLKPYNLPEPGLVEHPDDDWWDAICEA AKKCMASFKGNIEDIVGIGLCTIRYCRAYLKADGTLAQPALSWMDVRVAQPYEHTNPDVK YIVASSGYITNRLTGEFKDTVANYEGVWPIDVDKWDWSDDPAAYESTGMPREMLFDLVMP GDVLGYVTKEAAEATGFPQGLPVVATSNDKAVEGLGTGCMGDTTACISLGTYTAAMMEGK EFLRDTKYVWPKFSCVPDKYLYDSNGIRRGMWTISWFRDILGDSYVQAAKEKGLSAEELL SEEAEKVPAGSDGLMTVLDWLAPVDAMYKKGIMIGFDGRHTRGHIYRSILEAVALTMKKH LDDMTGEMGVKLDRVIITGGGSNSDLFMQIFADVFNIPAVRNEVNGAAGLGAAICAAVAA GVYGSFDEAVDNMVRIKDSFEPDAEHVEFYAKMLPIYTDITNHTDDILKKSYELFH >gi|224461044|gb|GG657760.1| GENE 68 71491 - 72276 200 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 15 256 1 238 242 81 26 5e-14 MSLNINDFSMDFFSLKGKNAIVTGGNSGLGQAFALALAKAGANIFAFAFVDDDGTTQKLI EDCGVKYTFMQGDLTEDGMCDKVAEKCAEVYGSIDILVNCAGICKIADVLDFGRAEWDPM IAINLTGAFDLSHAVAKYMIPQKSGKIINICSLFSFLGGLGSPAYAAMKAGLMGLTKAYA DELGKYGISVNGIAPGYFQTAMTSGTGSANDEKYNKIKDHIPADRWGERQDLMGATVFLA SQASNYVNGTVLVVDGGYLVR >gi|224461044|gb|GG657760.1| GENE 69 72294 - 72530 90 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570807|ref|ZP_03779830.1| ## NR: gi|225570807|ref|ZP_03779830.1| hypothetical protein CLOHYLEM_06910 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06910 [Clostridium hylemonae DSM 15053] # 1 78 1 78 78 137 100.0 3e-31 MHKNERALLSIITILTNDMTRFTMDIVTKRAEERVTFTCVQWVEVALFFVCGKTVSRPAF RSCCAQTEAAGSFAIMIK >gi|224461044|gb|GG657760.1| GENE 70 72523 - 73407 998 294 aa, chain - ## HITS:1 COG:TM0176 KEGG:ns NR:ns ## COG: TM0176 COG1578 # Protein_GI_number: 15642950 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 1 277 4 280 293 145 34.0 9e-35 MRADKECYACCLKKAESLLLQYQVPQSTSAGVLAHIKEQLACADPDTSAPVLMARAMSLL GEQTGITDAFDLPKRKYNELLLRREEEVYDEVMGEKDRFFAALQYAVTGNYIDFGAMSDV EEEKLKELLSARPQVKLDMEEASRLSEDLSRALRLVYITDNAGEIVLDKVFLRVIKELYP KLQVTVLVRGVPVLNDATSEDAALAGMDKIAVVIPNGTDIPGTPIDAISREAREAVDAAD LCIAKGQGNFETLRGCGRNVYYLFLCKCELFVRKFQVERFTPVLSNEKRIIQYA >gi|224461044|gb|GG657760.1| GENE 71 73424 - 73999 779 191 aa, chain - ## HITS:1 COG:ygcP KEGG:ns NR:ns ## COG: ygcP COG1954 # Protein_GI_number: 16130675 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Escherichia coli K12 # 16 189 11 184 191 169 44.0 3e-42 MSLTKEYFMEATEACPVIPAIKNEEWLEGCRESECGIVYIIYGDICTIADIVQKVKEMGK KAIVHVDLIVGLSSKEISVDFIQKYTEADGIISMKPGLIKRANELGMFTIQRFYMMDALT YANIVKHVKNCNPDVVEFLPAGLPKVIQYLLEEIDKPVVASGLILDKEDVMGALKAGAFA VSTTNRKMWDC >gi|224461044|gb|GG657760.1| GENE 72 74006 - 75616 1868 536 aa, chain - ## HITS:1 COG:lin2197 KEGG:ns NR:ns ## COG: lin2197 COG1292 # Protein_GI_number: 16801262 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Listeria innocua # 18 503 7 483 507 219 29.0 9e-57 MEAEVREKTVKLSLRKGVFFPPWLLLVAMVVVSLTNGDAFMAGLNAVTNWILGNFAWAFN LTTVGCVITVIMVYFSPLGKVRIGGSKAKPMMKFLDLVWITLCTTIAAGILFWACAEPLY HMNAPAVAEGVEAGGASSALFAMKTMFLEWTWSPYAIYTVATLIFAFVFYNMNQSYSMGS ALVPVFGEKVKKYNGVVDVICLFALVAGMAASLGTGTMTIGGGVEKVFGFESGPVSWGII IAVIVTTFIISSVSGIMKGIRLLSSINAKVYMVLLLFLFVFGPTAFMLNFSAESWGAYIQ DFFRMSLMTGDIFQDGWAKSWPIFYWCNWLAWTPITAVFLGKILRGYTIKDAIKCNFIIP AVFSTIWMGLFATASIYYEMNGAGLYDTLLNKGTESVVYAVFDQLPLAVIVIPFYLFIVF ISFVTASDSNTNAMAGLCTNGITQDEQDEQESPSWLKIVWGISIALMTWLLISFAGIDGI KAASNLGGFPNMFLVIIMIIGLWKISRNPQKYDVHKEDYDSKGRPIVTPRLPIEKE >gi|224461044|gb|GG657760.1| GENE 73 75621 - 76136 396 171 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570811|ref|ZP_03779834.1| ## NR: gi|225570811|ref|ZP_03779834.1| hypothetical protein CLOHYLEM_06914 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06914 [Clostridium hylemonae DSM 15053] # 1 171 1 171 171 286 100.0 3e-76 MVLLRFIYKLEQKEIEEALLDLNWRREGRFRTVNLWVLSILGVLVLTAYMKDPGQFFLFL LLLLIILLLFYMAYGAVYSRRRRAGKMAARGGEYRLEITESCIIAGDKNEKIKLSGKKLK FLCSEHVIVIRADRDVFTVPRRIVSEEESGELKKIAAKYGCGFINIVIRKE >gi|224461044|gb|GG657760.1| GENE 74 76111 - 77130 951 339 aa, chain - ## HITS:1 COG:CAC2543_2 KEGG:ns NR:ns ## COG: CAC2543_2 COG2025 # Protein_GI_number: 15895805 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 5 326 6 329 332 274 43.0 2e-73 MRQADTAAWSGILVYLECRRGKLHPVGRELIAEAARLSAKLGGKVYAAAIGCGLEDVPKQ LADCALDKIYLYETEEEYSPVLYEKIMTECIYDIKPSVVLIGGTYEGRALAPRLAVAFGS GLTADCTALDIDEEDNLVQIRPAFGGNVMASIVTQFTRPQFATVRPGIMEAFFGENPGRA EIVRKTVRPADDSFRILDVQEKEASGGITDAHVLVVAGRGVKKKEDLAMLRELAGLLGGQ LASSRALVEKGWMPPERQIGLSGSTVSPDYMITCGVSGTVQFMAGMRHTKNIIAVNTDPD ARIFEIAHYPVCGDLYEIVPELIKRLGAGKGDGSPEIHL >gi|224461044|gb|GG657760.1| GENE 75 77127 - 77924 781 265 aa, chain - ## HITS:1 COG:CAC2544 KEGG:ns NR:ns ## COG: CAC2544 COG2086 # Protein_GI_number: 15895806 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Clostridium acetobutylicum # 1 256 1 256 262 247 47.0 2e-65 MRIAVCMKQVPAASEGNMDPETGVLIRTGLEAIVNVYDLAALEAALQLKETYGAQIHVFT MGPAKAEHVLREAFAMGADEGYLICDRAFAGADVLATSYTLKQAIGSVGKYDLILCGKQT TDGDTAQVSGALAKWMDILHVSWVTEISEISQNTVKICYNMDNRVISAQAELPCLLSVEK DAFVPRMPSLKLKISGRKKEIHMLDMTSFEDRNEENYGLKGSATRVRRIFPPERTKRREL VNVSKEKAAEYIWNILNTDVQEERV >gi|224461044|gb|GG657760.1| GENE 76 77921 - 79363 1446 480 aa, chain - ## HITS:1 COG:mll1488 KEGG:ns NR:ns ## COG: mll1488 COG0277 # Protein_GI_number: 13471498 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Mesorhizobium loti # 27 473 153 566 575 142 29.0 1e-33 MRQLIFPMKEQYEEFLIDESKFSGFADSISFPESEEEIQEVLRAVNGERLPVTIQGGKTG ITGAAVPEGGHVMNLSRMNKVKSSVLLEDGTGRITVEPGINLMDLSREIAAAFRKNPLFW PPDPTETSATAGGIAATNAQGISRLLYGPARTYIESLRLVKSDGQVITVEKGQKMTLPSG RVIDRIDAVLGKEGITGVMSELTLKLLPKPAGIWGIAFFFGQTKEAGRFVDILRQHMPEC ENAAVAAVEYIDRTSMDLIEKHKGVMTKIKELPDISEETEGMVYVELHGEEDEIELLAES LMETAMVCGSDPDEAWAVSGETDVERLRAFRHGAAETANLYIEEVRRNDERITKLGTDMV ISDMSFSDTLCNMTEELKQAGLKASIFGHALENHLHVNILPDDHDDYEKGIALIRKWAAQ VRERHGQVTGEHGIGKLKLRILDGLLSKPYIELCTELKEELDAGFVWNRGNIIGGKAGGV >gi|224461044|gb|GG657760.1| GENE 77 79382 - 80314 737 310 aa, chain - ## HITS:1 COG:ygcQ KEGG:ns NR:ns ## COG: ygcQ COG2025 # Protein_GI_number: 16130676 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 69 304 53 288 297 124 36.0 3e-28 MRYHCIINAHSEDINRQLEEFCAFKRAFLSESEEGEAFILCRDMSDAEKLNGHVSKSAAA VTAGEYCPETVLAALHGEILPEDLYIFGSGYSGTELAVRLAERAGGSSVTAVHSLEKKER LTVRKMVYANHMEGAFCMRRGPYCISLAKGMDRQQPEKKEFCDFREIQCPQKSGFVVSRE TCAEETSGGLGDANIVIAAGRGVRNKENAEFLQKSAEALGGELGVSRPAAMNAWAPMNRL IGVSGAMLKPDICIAAGVSGAAAFYAGIEKSKFIVAINTDEQAPIMKKADVAVADDFVPV MKALRKLAEK >gi|224461044|gb|GG657760.1| GENE 78 80311 - 81141 785 276 aa, chain - ## HITS:1 COG:ygcR KEGG:ns NR:ns ## COG: ygcR COG2086 # Protein_GI_number: 16130677 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli K12 # 1 274 3 260 261 122 32.0 7e-28 MKILGCFKIVPDLDLIAEEDWTADDRLRVDTGYAKLLWNCFDEGALEMMLKLSDLSEGFD VVYELNALTVGGRQHETFLKTLYALKFEHAVRVEADGDTDIRFCPEIIAQIVADHVRHNA AQDVVVMGIQSSDGSNMKTPLLLAEMLGWPCITQVTAMEPVDEAHLKVTSQEDGCTAVQT VTVPCVLAAGNAPSAYLRVPTLKDKMKFGKKPVEHISPDWETLLGSKGGVSEPAVELVEL KQVVESRDTVLIDGDTPEEKAEKLFETYLKERLEKV >gi|224461044|gb|GG657760.1| GENE 79 81145 - 82602 1759 485 aa, chain - ## HITS:1 COG:ECs3629 KEGG:ns NR:ns ## COG: ECs3629 COG0277 # Protein_GI_number: 15832883 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 4 485 3 484 484 632 61.0 0 MAIISREQIVEGLVDILGSEQVVTDEQVLKESSLDRYRKYEQVCEVYTQPIPAAVVYVKS AEEVSEVLQFANDNEINVVPRTGQSAIEGGLETALKDSVVIDGSTMNKVIKVDEYNMQVT CQCGVPLQELDDMLRERGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGGIEDMIVGLE AVFPNGKICRIKNVPRRAAGPDIRHIICGNEGALCYITEVTLKLFKWQPENNRYIGYMLD DEYMKLGFDCLREVMVAGYKPSFARLYDAADAQQHFSAWLPEGKAILIWMAEGPANITPA IEAGIKEMMSKHPELEEVDPKLIEKWYGGLNWGPEQIAEEKEEIKATQNIGITTEVSGSW DNIYDIYKTACDRIMEEVPDMTLMGGHSSHSYINGTNMYFVYYYNIVDCAPEEEINKYHD RINQIICEQVIKYGGSIVHHHGLGKARAKYVTQEYGSSYYMLKTLKQAFDPNGIMNMGTL IPLRK >gi|224461044|gb|GG657760.1| GENE 80 83058 - 84299 892 413 aa, chain + ## HITS:1 COG:ECs3631 KEGG:ns NR:ns ## COG: ECs3631 COG0477 # Protein_GI_number: 15832885 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 7 409 7 417 425 182 30.0 8e-46 MNKAFVKKYGTLLLLATGAGIIFQLPYIRETFYVPIQNAMNLSNAQMGLLSSGYATMSLF SYFIGGIIADKFSARKLLTFSFIATGILGLWFSTFPGYTISRVIFVLMGISTIITYWSAC IKATRMLGTDEEQGRLFGLQEGLRGIMNALLVFGMTAAFTRFADEVAGASAAIKVCSIVV IIIGILNFIFIEDTKKEENSESLAEITKGMFKALLIPRVWLLVAIVFTAYSVYGLIAYAT TFAQQFYGLSAASAATLGGVRYLIQGAGGIVGGFLADKMKSRFKVIIGGCIGLALSFGLF IVMPSKASLCVMVVANFFVGLFFIYAVRSQYFAVHDDAGIPINMSGRVSGIASCLGYTPD IFMYTLVGSWMDNYGRTGYNMTWAYAMIAAVLCAIITFILSRIVKKENAQKTA >gi|224461044|gb|GG657760.1| GENE 81 84732 - 85442 796 236 aa, chain - ## HITS:1 COG:BS_sleB_2 KEGG:ns NR:ns ## COG: BS_sleB_2 COG3773 # Protein_GI_number: 16079350 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall hydrolyses involved in spore germination # Organism: Bacillus subtilis # 127 221 9 98 125 65 38.0 8e-11 MKSKKHVGLLVTLLTVTSLFTAGYSSEAAAGEPEALPVTADANADKYASCLMDMKETTQK IIEEQQKIAEEKRIAEEKRIAEEKRIAEEKAAQEKAAQEKAAQEKAAQEKAAQEAAQAAQ QRAVSASQSDQDLLAAIIFCEAGNQPYDGQVAVGAVVMNRVRSGIFPNSIRDVIYQSGQF GPAVTGWLDQVLSSGGYTDTARAAAADALAGANPIGDCLYFDQGGSGMQIGAHYFH >gi|224461044|gb|GG657760.1| GENE 82 85683 - 87620 1405 645 aa, chain - ## HITS:1 COG:BH2013_1 KEGG:ns NR:ns ## COG: BH2013_1 COG0642 # Protein_GI_number: 15614576 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 119 642 10 537 585 138 24.0 3e-32 MADKREKWILMAVLPFIAVLLLAVWSVKPRVDEVRTIDSKAGTWDLAAAGFEQSAVRLDG DVEYVPDALLSPEEFSRRGDIQAGQPGDETQYATSRMRLIIPSGSYLICGYSVDFASRMY VNGELLFEAGAPGDSRESARPGVKFFVLPVSPDENGEIVIVQQASNFIHKDGGSYGHFYI GTPEQIDQYISRNLWPEVILMGVYLVLFVVHLILYLMMRNYKPNLLFALFCLTWFVRTGV TGQRLLDVILPKLPWVVLFRLEYLTMPLSGILLVWLLYLIFPGVLQKWFSLAASILCGAV AVLDVFASTLLISYTAVWRVVLLGVIALYFFVRLILRWRRPAAEQAAVLSGFAFLVFAAV WDMCYHRDVFLLPALRFAISEVAIAVFVLFAMTAMFFGTMREVRMAREREERMAAEKAAA EELARLKGEFYTDLSHEMKTPLTVMVANAEFAARNIRAGAIDEETGVDLDAIAAEGRRLA KLVNGLVNLNRMRDKGAQDTVVSLAKLTEETARTYKALAEKQGSRLSVEIESGLPAVNGN ADQLAQVVINLLANAGRHTRDGVITVSLRRESGRLRLEVADTGDGISPEILPHIFDRFCR GDESGTGLGLAICREIIENHGGKIDIQSDMGKGTTVWFTLPVIGE >gi|224461044|gb|GG657760.1| GENE 83 87697 - 88410 446 237 aa, chain - ## HITS:1 COG:CAC0885_1 KEGG:ns NR:ns ## COG: CAC0885_1 COG1145 # Protein_GI_number: 15894172 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 1 102 1 101 115 124 59.0 2e-28 MVRRIIQIDEEKCNGCGLCAKACHEEAIKMENGKAKLLRDDYCDGLGDCLPACPAGAITF VEREAAAYDEEAVRRNKRKKTNEKDGTLPCGCPGSHSGQIVREPSSGTACQAPAVHSMLR QWPVQIKLAPVNAPYFDGADLLIAADCTAYAYGNFHQEFIRGKVTLIGCPKLDDTDYSEK LAEIIRENDVRSLTIVRMEVPCCGGIEHAAASALKESGKFIPWHVVVISTDGHILER >gi|224461044|gb|GG657760.1| GENE 84 88505 - 89191 335 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 28 225 20 217 223 133 37 1e-29 MKEYDGTAAVEGRNITKDFIVGDTVSKVLKGISLKVMHGEFVSVMGQSGSGKSTLLYILG GLDTPTEGSVYINGTDISRFNDADMSRMRRQKTGFVFQFYNLIPNLNVEENIMLPLLLDG KKMRDYRDQLAHILQVVGLSDRRKHTPRQLSGGQQQRTAIARALIGSPEILFADEPTGNL DSRTGADIMRLLEEINRTSGQTIIMVTHSPEAAKSSGRIITVRDGIIS >gi|224461044|gb|GG657760.1| GENE 85 89211 - 91661 2008 816 aa, chain - ## HITS:1 COG:CAC3561 KEGG:ns NR:ns ## COG: CAC3561 COG0577 # Protein_GI_number: 15896796 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 1 816 12 842 842 286 28.0 1e-76 MKERKVRTAVMALTILLSSALLFVSVSIGTSYESAQKKMARGMTGAASVSVTAADSRAGL DDSTIPKLPEVKAAAGILKSSALYSEDGYYESVDLVAADLEQLNRINKPRMADGKEITGF SGNQIILPERFTSKFGIKKGDTVTLQIGKRPVSFEVYGIAAYDTLFLRQTRGATALVPLA ALTAVVQPPQKYSDILLEPSEGVTAAELKSCLENILPQQQYHVSETVDEAQITADARQKS MPFFLISFFSLTMSVFIIFSSYKVITLERLPTVGTFRSIGAEEKTVTAILLAESIVYGLA GGLVGIPAGIAVLKAILHGMGKELTEGIEIPAVITLPGIVLSFAAAMTVSVLSAWIPVRR AGRLPVKDVVLGTVEEQGRPARYAVGMAVVLAAVSVILPRVAPEGLLYLAGGISLLGLIT AALLIIPSLTDLAAKYLERLYGVIFHNEGILAARNMRDNKNITQNITLLFISISAVISIS VVGSFVTSYISDVFQGAELEGFADGYMDEDFVEQVRKMEGVEKVLPVRVLEDKVQAEGYT FSRFEAADDLERYSSMFALRYTDSSMKQNAVSAFKQGGRALLMSEAYMKEAKLKTGDTIS LSDGTFSADYRIEGSFRSRATDVEAVIPSSCAVRDFGADAYNFLAYTAADPDAVMVQIRG LFGETPNWSRTVEEFNSDAARTVGAFLEPMHSMTYFILLMAAVGIVNNLLINYMQRRRTI AMYKSAGLSNRQNVKMMLIEGFTSGSAGAVTAIFVSYLEIQTIFIVAGPKISVKPELDMV TFLAAGAMGIAITVAGTAAPIFKSCRMKLVEVIKFE >gi|224461044|gb|GG657760.1| GENE 86 91788 - 93197 1056 469 aa, chain - ## HITS:1 COG:CAC0290 KEGG:ns NR:ns ## COG: CAC0290 COG0642 # Protein_GI_number: 15893582 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 469 1 466 467 232 29.0 1e-60 MKRSGYRTSLHIYFIFLLSLLCILITASVLFFMLITVRKADGTIVRSDWPESFTQEFEKQ IVFIDGKPRVTQAGLELLQKEELGIQILDAAGEEQFSFRKPEQVPSGYSSAGLLEVERAG HLADRKTASLIGVAADSNCTYIVHFPTAVNRLTMQLNGEHLIRGRTIAFWLGGLMLLLIF LSGIVYGFCMTRTMGRVTDAVKAIALRAYMPVQGKGTFSDIYDSLNVLDAEIRSSDRLRE QTDTMRREWIANITHDLKTPLSPVKGYAEIMQEEGGAGAEEQYRRYAEIILKNVSYMEQL LDDLKLTYQLESGTVPLERKRMDLVRFLKETVIDILNTPEYEERSIQIQSSREDIFFSFD RTLFRRAFNNLIVNALIHGGRDAQITVGAAVFKNEIQVTVSDNGKGMTAEEADRMFRRYY RGTDTDKKPEGTGLGLAITKNIIESHGGAVDVHSAPDEGTEISITFKVN >gi|224461044|gb|GG657760.1| GENE 87 93198 - 93902 698 234 aa, chain - ## HITS:1 COG:CAC0289 KEGG:ns NR:ns ## COG: CAC0289 COG0745 # Protein_GI_number: 15893581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 4 230 8 234 235 217 50.0 1e-56 MADKILLVDDEKDIVDLLEETLRKDAAYEIKKAHTGAEALSMCREFHPDVIILDIMLPDI DGLEICRQIRGFSYCSILFLSSRDDDIDKILGLSGGGDDYITKPFSPREVAFRVKAQLRR QKYQHSIPPQQEKLLPAGGLTIDSESCRVCKNGEEIELTGREFLLLSYMAENAGRIISKE RLYEQVWGEYSSICDNTIMVHIRHIREKIEDNPSEPELLVTVKGLGYKLKKRND >gi|224461044|gb|GG657760.1| GENE 88 94139 - 94945 382 268 aa, chain - ## HITS:1 COG:no KEGG:SAK_0759 NR:ns ## KEGG: SAK_0759 # Name: not_defined # Def: prophage LambdaSa04, minor structural protein # Organism: S.agalactiae_A909 # Pathway: not_defined # 132 268 489 618 618 102 42.0 2e-20 MTTNKFIFQVYVGENGNWYINDTDTGAKAQGEQGEKGITPHIGINGNWFIGETDTQVPVT GPKGDTGAVGPQGIQGPKGEKGEQGPAGPVNIANNLDTMEEGYALDARQGKLLDEKINQI FSDFSIISPMVQKLYQLMHPVGSIVIQTVETNPSELYGGTWVAWGNGRVPVGIDKGQIEF NAAEKTGGMKKHTLTIDELPNHNHAIVNKRYATTFSTGGTGHEPLQTTGNRSWTNISDED ISTAFAGSNASHNNLQPYVTCYMWKRTA >gi|224461044|gb|GG657760.1| GENE 89 95765 - 96364 533 199 aa, chain - ## HITS:1 COG:BH2728 KEGG:ns NR:ns ## COG: BH2728 COG4753 # Protein_GI_number: 15615291 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 83 197 382 500 510 84 37.0 1e-16 MDNRHPVQAGELLQRFIRKSHGERLSPKIILAGCTGIMYDLMNYIVSVTGEDNISRTEEM IVRLMKIQTALELEEYMKEHIEQFYEITGSSPRKYSPSIEKSILYIEENCTEKISLEQVA GKVFLNKNYFSELFKKEVGMNYNDYLNEARIRKACAYIASGEYSLSQVAQMTGFSDQNYF AKIFKKVVGETPMGYRKRL >gi|224461044|gb|GG657760.1| GENE 90 96302 - 96433 59 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAFSDEPLQQFSRLYRMPVVQCIFDLILVFDPTLIKSTEGYYD >gi|224461044|gb|GG657760.1| GENE 91 96460 - 96585 160 41 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570830|ref|ZP_03779853.1| ## NR: gi|225570830|ref|ZP_03779853.1| hypothetical protein CLOHYLEM_06934 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06934 [Clostridium hylemonae DSM 15053] # 1 41 10 50 50 68 100.0 1e-10 MSEVKTLNYFKRQVRAVRPRKYTYACNPSTGEITARVPCCT >gi|224461044|gb|GG657760.1| GENE 92 97234 - 97455 108 73 aa, chain + ## HITS:1 COG:BH2319 KEGG:ns NR:ns ## COG: BH2319 COG0524 # Protein_GI_number: 15614882 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Bacillus halodurans # 1 62 265 326 331 65 51.0 2e-11 MKGFGGGDGYGSAFLSCLLDGCEIIDCLEHGSASASMLVASHGCSPDMPSMEELEAFIRK EKDTYGEMIARCS >gi|224461044|gb|GG657760.1| GENE 93 97468 - 98292 775 274 aa, chain + ## HITS:1 COG:lin0378 KEGG:ns NR:ns ## COG: lin0378 COG0191 # Protein_GI_number: 16799455 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 274 1 277 286 165 32.0 9e-41 MLDTLRHIIQITEEQGHGTAAFNVFGYEDARAVIDAAEALDRPVILMTNKPALAHMPVHL LGGMLIQMAREASVPVGVHLDHADDLEVIEAALQTGYSSVMIDASQLPFEENISRTKYVV EMARDFGAGVEAEIGAVGYSDAPDTYQARYTQPEEAQEFAGRTGVDALAVAVGTVHRMQT QTARLQFGLLERIHKAVNTPLVIRGSSGISDADLKKLVLCGVRKVNLGTTLRMAFGQELR RQIEADEKLFDRIVMFQSCMTQVEKKARQKIEVL >gi|224461044|gb|GG657760.1| GENE 94 98414 - 100462 1119 682 aa, chain - ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 101 352 601 819 1734 63 25.0 1e-09 MKKAKKSILALLLAVMMLFSLAPAPVFATGADDAPTGSSTQTKASEGAPSDVGSGAPDII TSEQQTDGAQTGAQFDQSGTVDLNRYDSFEEAASAQTNEPRTQYTTLKITGKTNRDTWTT DDRNYFRTNFSRVAELDLGNFTGTFGERAFEKSSIEKVRLPADVSIPIYMFSGCKSLATL SVGSNLPASGVIDLTGFTAAYSDRAFEDCTSIKEVKLPADVAIANAMFSGCKSLATLSVA GNINAQGGVIDLTGFTATYGGGAFRACDSIKEVKLPADVAIGDYMFYGCGSLATLSVEGN INAQGGVIDLTGFTAAYGDDAFRDCISITEARLPDAAISQEVFIGCTNLDVLMFYGAGAP GVGFKAFSGVHDGGTLYYPQGGMDYTKGTFGAPDLANWDFIEAFGPEVVTQPSAQTGTVG QTAAFQFAVSGAPLAFRWQQSVNNGSWTDLADGGGYAGTATDMLIIDNLQQEQNGYKFRC VASNYGNYSADVISKAVTLTVSAEPALQPPAAPYDKAAPGDLVFTYTGAIAGPDVGVSAQ FTYLPTGEVSTNLPPESRTGAGDGFVYTPDVGVTFPLALMQQHASPNGSGVAGLRTGRYR LDLTVMLADGVSKVYSAEFEIIDSTPVPVPKPGSTIPQTGDTANPLSWLLIILAALAVCA SLLLYRKRRAKDSKATGIPRKR >gi|224461044|gb|GG657760.1| GENE 95 100943 - 101368 582 141 aa, chain + ## HITS:1 COG:CAC3714 KEGG:ns NR:ns ## COG: CAC3714 COG0071 # Protein_GI_number: 15896945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Clostridium acetobutylicum # 34 129 46 140 151 73 44.0 1e-13 MLLANRSINNLFDDMFKDPFFSRPFENSSSQIMKTDIHEKDGSYMIEMELPGYAKEDIKA DLKDGYLTITANRDETKEEKDAKGNCLHKERYTGSCNRSFYVGDKITQDDIKASFRDGVL LLQIPKEVQKVEEQPKLITIE >gi|224461044|gb|GG657760.1| GENE 96 101488 - 102126 678 212 aa, chain - ## HITS:1 COG:no KEGG:Bache_0269 NR:ns ## KEGG: Bache_0269 # Name: not_defined # Def: hypothetical protein # Organism: B.helcogenes # Pathway: not_defined # 1 210 1 169 169 115 35.0 9e-25 MGYCIKCGAKVGDGIRYCPQCGAEIPAQGHQEYTYGQDAYGQNTYGNDTYGQNAYGQDTY GQNAYGQDTYRQEYGRQDSKTTGPGSGNRQGGGTYFDRDDVRSNKGVGVLSYLGILVLIP LLAGNKNSEYVRFHSNQGLVLFITSVVINLLSGNWVFGLHSLISFSGWWFGWIFDLIGLV LFIFAVMGIVYACRGEKKELPFIGQIHLLRRE >gi|224461044|gb|GG657760.1| GENE 97 102145 - 102381 413 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570837|ref|ZP_03779860.1| ## NR: gi|225570837|ref|ZP_03779860.1| hypothetical protein CLOHYLEM_06941 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06941 [Clostridium hylemonae DSM 15053] # 1 78 1 78 78 123 100.0 4e-27 MVPVNKEDLRRLVTQTTVETYEELTPQLIGLIDGTKHNEKLTEAQKQDEISLHMMGYVKS CTNEIIIEVLSEILGLTE >gi|224461044|gb|GG657760.1| GENE 98 102417 - 102884 624 155 aa, chain - ## HITS:1 COG:BS_yvaI KEGG:ns NR:ns ## COG: BS_yvaI COG0691 # Protein_GI_number: 16080413 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Bacillus subtilis # 1 150 1 150 156 174 58.0 7e-44 MAKSNGKMIANNKKAYHDYFILDTYETGIALHGTEVKSLRMGKCSIKESFIRIENGEVYI YGMHISPYEKGNIFNKDPLRVRKLLLHKSEINKMLGKTKEKGIAIVPLKVYFKGSLVKVE IGLAKGKKLYDKRQDIAKKDQQREAQRDFKVRNLG >gi|224461044|gb|GG657760.1| GENE 99 102871 - 105024 1760 717 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 12 716 7 712 730 682 49 0.0 MDKAFEKRKKVIYDLVCDEMYVPMKFKELAMLLQVPKEQRKELKEVLASLEEEGRIHRSR KGKYCKGEAKHLTGIYQAHQRGFGFVTVEGEETDIFVGEEDTNGAFNGDTVEVAITKEPE GKRREGKIIKVVSRGVTRLVGLYQTKRGKSYGFVIPDNQRFVQDIFIPEEKSKGAVDGHK VVAELTFYGEPGRKPEGKIVEIIGHINDPGTDIMSIVKGYDLPVDFPEKVLNQAERVAKP VSEADMEGRKDLRDWQMVTIDGEDAKDLDDAVSVTKEGDDYILGVHIADVTNYVQENSAL DREALKRATSVYLVDRVIPMLPHTLSNGICSLNAGEDRLALSCIMKIDSRGAVIDHEIAE TVIHVDERMSYTGVKKILSDKDEEERARFREFVPMFELMQELSSVLRKRRQVRGSIDFDF PETKMILDENGKPVDIQPYERNTATKIIEDFMLLANETVAEDYYWQELPFVYRTHEAPDD EKIRTLAAFINNFGYSMHIGPNEIRPKEVQKLLAKVEGSPEEALITRLALRSMKQARYTP DNSGHFGLAAGYYTHFTSPIRRYPDLQIHRIIKDSLRGRMDEEKTKHYKKILPEVTKHAS EMERKADEAERETIKLKKVEYMEAHVGEVFDGVISSITKWGMYIELPNTVEGLVHVTNMT DDHYEYYESRYEMVGVHRSKVFKLGQHISVRVIGTDRLMRTIDFEIADEGEMGDGEE >gi|224461044|gb|GG657760.1| GENE 100 105117 - 105386 412 89 aa, chain - ## HITS:1 COG:no KEGG:Closa_2213 NR:ns ## KEGG: Closa_2213 # Name: not_defined # Def: preprotein translocase, SecG subunit # Organism: C.saccharolyticum # Pathway: Protein export [PATH:csh03060]; Bacterial secretion system [PATH:csh03070] # 25 88 14 77 77 88 71.0 8e-17 MVYPQEVFEVEILKTILLIIFAIDCIALAAIVLLQEGKSAGLGTIGGMADTYWGQNKGRS MEGALVKSTKFLAILFIVLAAVLNLKVFA >gi|224461044|gb|GG657760.1| GENE 101 105461 - 106768 1703 435 aa, chain - ## HITS:1 COG:BS_eno KEGG:ns NR:ns ## COG: BS_eno COG0148 # Protein_GI_number: 16080443 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Bacillus subtilis # 7 427 4 419 430 525 64.0 1e-149 MYNCLPITDVYAREILDSRGNPTIEVEVLAGEEFIGRAGVPSGASTGQYEAVELRDGGDR YGGLGTEQAVNHVNTIIAPAVIGMNVFAQAELDEALIHMDGTENKKNLGANALLGVSMAA ARAAAKALGMPLYAYLGGANAKEMPVPMMNIMNGGKHADNTIDIQEFMIMPSGACCFREG LRICSEIYHTLKKNLKKEGYSTAVGDEGGFAPDLPDAREALRFITDAIRMAGYQPGEEVV IALDVAATELYDRNFKKYVFEGEGRMHGYKVIRSVEELIDYYEDLAEEFPIVSIEDPLDE EDWEGWELLTTRLGLNMQLVGDDLFVTNTKRLKKGIETEVANAILIKVNQIGTLTEAFDA IEMAKSAGYKTIISHRSGETEDSIIADIAVAFNSGQIKTGAPCRSERVAKYNQLLRIEER LGDTAKYENPFKSDN >gi|224461044|gb|GG657760.1| GENE 102 106831 - 107946 1288 371 aa, chain - ## HITS:1 COG:CAC1574 KEGG:ns NR:ns ## COG: CAC1574 COG1454 # Protein_GI_number: 15894852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 1 371 1 371 371 353 47.0 2e-97 MKLFQQKSRIQQFDLAEDFVKEYGIGEGDFILASRTIYDKYFGPLDLNACVKYKDDYGKG EPTDSMMEALLRDFRSSGCERIAAIGGGAVIDMAKILVLDGAYSVKDIFEKKAVFKKKYP LIAVPTTCGAGSEVSNVSITEMTELNSKLGLAADELYADDAVLIPQLLSELPYSFWATSA IDAFIHAIESYVSPKANLYTEMFSIKAMEMIIHGFRSVIENGPDRRMELMEEFLTASNLA GIAFGNAGTGAVHAMSYPLSGVYHVTHGEANYQFLIAVFCAYQRFRPEGKLKRLNECLAG MLGCKAGEVYTELKNVLDKIIERKRLREYGMKREEIESFAKSVETSQQRLLNQSYVKFSW EQMAEIYSQLY >gi|224461044|gb|GG657760.1| GENE 103 108073 - 108915 1065 280 aa, chain + ## HITS:1 COG:CAC0496 KEGG:ns NR:ns ## COG: CAC0496 COG1284 # Protein_GI_number: 15893787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 280 3 279 279 178 38.0 8e-45 MKSKTKSFALLTGSTLIMAVGIYFFKFANNFTFGGITGLAVLVAKSGVISASDFTFIANM ILLVIGFIILGRKFAAKTAYCSILLSVCLSLLERVYPLTHPLTDQPVLELAFAIALPSLG SAVLFNIGSSSGGTDIIAMIMRKYTSADIGKALLITDFIITLAGCFVFDIETGLYSFLGL AVRSFMIDGFIESLNLSKYFNVVCNDPTPVCDFINDTLKRSATIVLAQGAFSGEDKYIIF TALNRIEAVKLRNFIKENDPEAFMLISNTSEIIGKGFHSI >gi|224461044|gb|GG657760.1| GENE 104 109036 - 110382 1724 448 aa, chain - ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 1 440 1 441 448 415 49.0 1e-116 MGKYFGTDGFRGEANEKLTVEHAFKVGRFLGWYYGQDHKAKVVIGKDTRRSSYMFEYALV AGLTASGADAYLLHVTTTPSVSYVTRTDNFDCGIMISASHNPFYDNGIKVINGKGHKLEA EVEDKIEKYIDGETGEIPLAKQEKIGRTVDYAAGRNRYIGYLISLATRSFEDMRVGLDCS NGSAFAIAKSVYDALGAKTYVINNEPDGTNINTNCGSTHIEVLQEYVKEKKLDVAFAYDG DADRCIAVDENGSVVDGDLILYICGKYLKENGRLNGDTIVTTIMSNLGLYKACDKAGLKY EKTAVGDKYVYENMVQNNFSLGGEQSGHIIFSKHATTGDGILTSLMVMEVMLEKKMSLSK LAEEVKIYPQLLKNVRVSDKKTAREDPQVVRAVEAVAEALGDDGRILVRESGTEPVIRVM VEAATDELCARYVDQVIDVMGQQGLITG >gi|224461044|gb|GG657760.1| GENE 105 110544 - 111935 1407 463 aa, chain - ## HITS:1 COG:BH1470 KEGG:ns NR:ns ## COG: BH1470 COG2509 # Protein_GI_number: 15614033 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Bacillus halodurans # 2 461 3 475 480 434 48.0 1e-121 MNQYDVIIIGAGPSGIFCAYELMEKRPGMKVLVIEKGRSIEQRQCPKRKTKVCVGCQPCS ITTGFAGAGAFSDGKLSLSPDVGGTLPEILGYEKATSLIHEADRIYLKFGADEKVYGMED HEAIENIRAKAIRANLKLIECPIRHLGTEEGYKIYTRLQQHLVEQGVEIRFMTMVKNIIV EDGAAKGVVTEDGEEFYAPEIVAGIGREGSEWFSHICREHGIETKNGTVDVGVRVEVRDE IMKELNEKLYEAKLVYYTPTFDDKVRVFCTNPSGEVATEYYDDGLAVVNGHAYKSKDMKT NNTNFALLVSKNFTEPFKSPIEYGKHIAQLGNMLCDGRILLQRYGDFRRGRRTTEERLNR NNIVPTLKDAVPGDLSLVFPHRIMVAIDEMIQALDKVTPGIASDETLLYGVEVKFYSNKV VVNDSFETSIRGLRAMGDGASITRGLQQASANGLHVARSILNS >gi|224461044|gb|GG657760.1| GENE 106 112195 - 113373 1259 392 aa, chain - ## HITS:1 COG:CAC2445 KEGG:ns NR:ns ## COG: CAC2445 COG0138 # Protein_GI_number: 15895710 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Clostridium acetobutylicum # 3 392 5 391 391 518 62.0 1e-147 MKELELKYGCNPNQKPSRIYAADGGELPIQVLNGRPGYINFMDAFNGWQLVKELKEATGL PAATSFKHVSPAGAAVGLPLSGTLARIYWVEDLGELSPLACAYARARGADRMSSFGDFIS LSDVCDADTARLIKREVSDGVIAPGYEPEALEMLKQKKNGNYNVIQIDPDYVPAPLEHKE VFGITFEQGRNELKIDDEFFSDIVTDNKELTEQARIDLAISMITLKYTQSNSVCYVKDGQ AIGIGAGQQSRIHCTRLAGTKADNWWLRQSPQLLELPFVDTIRRADRDNAIDLYIGEDYM DVLADDAWPNIFKEKPEVFTAEAKRAWLDKMEDVSLGSDAFFPFGDNIERAHRSGVKYIA QPGGSVRDDNVIATCNKYNMVMSFTGIRLFHH >gi|224461044|gb|GG657760.1| GENE 107 113388 - 114101 681 237 aa, chain - ## HITS:1 COG:no KEGG:Closa_2181 NR:ns ## KEGG: Closa_2181 # Name: not_defined # Def: Inosine monophosphate cyclohydrolase-like protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 237 1 237 237 382 76.0 1e-105 MEMRSIEKELQENSYPGRGIIIGRSEDGTKAVAAYFIMGRSVNSRNRIFVEDGEGIRTQA FDESKLTDPSLIIYAPVRVLGNKTIVTNGDQTDTIYEGMDRQMTFEQSLRSREFEPDGPN YTPRISGIMHVENGGYSYAMSILKSNNGSPESCNRFTFAYENAAPGEGHFIHTYMHDGDP LPSFEGEPKLVSIPDDMNTFTDMLWDSLNEDNKVSLFVRYIDIATGTYETKIINKNQ >gi|224461044|gb|GG657760.1| GENE 108 114311 - 115414 842 367 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570848|ref|ZP_03779871.1| ## NR: gi|225570848|ref|ZP_03779871.1| hypothetical protein CLOHYLEM_06952 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06952 [Clostridium hylemonae DSM 15053] # 1 367 1 367 367 642 100.0 0 MKKKLSAILPVLFLTASVLFTGCGGASADEYLGEQITAMKKEDTGRFSSLLDEQLSETMD INMYVLTFPDELREPYLEFLQKAFASVEFEVASADKKDNGSYAVQVSFTPLDIGGTTKKV NDAYAEAMQGTDLTEETSALLVKAAEAVKDSPKYSAETTTEIEVKKKGGSYAISDEEYEK LVSASLADCMAPYDTICGILDARDLLQAFLDASFKGEFTQYMKHTDQTEEEAQAWYEADG AFDPPSDLSPQYKERCTEAYKAILKQCKYSVGIPHKVDNLFHYTVDVTVTPNNSIKQASD EFYACTFYSMEEASAAYTETFEKYAAAPVYGEETTMTVELSLSSLLASQDENRDLYTLAK TICPIPE >gi|224461044|gb|GG657760.1| GENE 109 115814 - 116434 670 206 aa, chain - ## HITS:1 COG:no KEGG:CD3160 NR:ns ## KEGG: CD3160 # Name: not_defined # Def: putative ABC transporter permease # Organism: C.difficile # Pathway: not_defined # 26 202 1 177 184 109 35.0 8e-23 MERYLQIGKINLKHNILPHLLVTAALLCLSPLVLGVSNLEAPDTAKVLEMYVALTGIILL TPVFLPEQNKDLRDLVYAKYMRASSVYAVRIAEAILAMGIFLGVYVWMLCYNNCEMDVLR YYGGTLAEMLFLGGLGVLCYGLADNLVIGYMVPVFYYIVAMGSGAKYLKMLYPFSMAAGS YEEKIYLLIAGIVMIAAGTALRSRRG >gi|224461044|gb|GG657760.1| GENE 110 116391 - 117629 1022 412 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_3015 NR:ns ## KEGG: CDR20291_3015 # Name: not_defined # Def: putative ABC transporter permease # Organism: C.difficile_R20291 # Pathway: not_defined # 4 403 2 413 429 284 37.0 4e-75 MFCSLFAKECRQTVRSLIYWLTVIVLTLFFFSQLGELEITGKPAKGQEEYGMKYSDDKQV IMKNTLGSLAEEYYGGTYSTYPIGFHKSVKPSKEENKRIGDIVKETTGITDMTVIEDLMA EHYNTGDVIMTGLSVPPVKGLSYERFQKLMQEVDDMLGGGSSYGAEMLESNAMEPMTYED AMEEYNTLVEKDHLTGGYARLFCDYMGIMLSILPVFLAVTRGLRDRRAQMQELIAVRKAS SAVIIASRYAAMLVMLMVPVLILSCFPLAECMSYAAEAGISIDHFAFVKYSFGWLLPSVM TAAAVGLVLTVLTDTALGVLVQGVWWFLSIFSSMSGMDGGKYGWSFVPRHNTAGNYAGFH DNFAQLAANRALYAAVSVVLVLAAIWIYAKKRRGKMDIHGKISANRKNKSKA >gi|224461044|gb|GG657760.1| GENE 111 117629 - 118507 1038 292 aa, chain - ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 7 292 4 292 294 236 43.0 4e-62 MTTEIEIRHLNQFYGKKQALKNVDLTIDKGMFGLLGRNGAGKTTLMKVLATLLPKSEGEI NICGVPVEHAAAVRSMTGYLPQEFSMYPNMTVYEAMDYLGVLSGLSKGERKKKILGLLKR VNLQDDRKKKVKALSGGMKRRLGIAQAILHDPKVLIVDEPTAGLDPEERVRFRNLLCEIA EERIVILSTHIVGDIEATCEQVAVLNKGEIIYRGSVAELTAMADGKVYSAEISRNELTEL KSKYIVTSMLTLGNNVIVRFLADKTPFPSARLAEAGVEDAYMYLMRGERGEE >gi|224461044|gb|GG657760.1| GENE 112 118581 - 119843 1103 420 aa, chain - ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 123 394 204 475 498 95 27.0 2e-19 MDWIEEKAEQLKTWIRDLTFRKAMLAYIAAAALISVILSAVTMTVCYRFESIIWNKYADM MQYNEVNGVPLWPDWSIAANWNIWAKDFAGFKGHDRQMMLMLDIIRVWCPFFYSFSGTVA AVFLFYRNRLKRPFGILKNGAEQIRQNNLDIHVTYDSEDEMGQLCRSFDMMRVEVIHNKE ELWQRIEGQKKLNAAFAHDLRTPLTVLKGYSDFLARYIPQGKVSEQKMLDTLKLMSSHLD RLEQFSRTMKGIRSMEERPVNPEETGAASIYAEIREIIFALNQIKDIEITLDCAKEAQTG QRIYVDKNIVAEVFENLLSNAIRYAVCRITVSAEYDSAEGLFLLAVSDDGPGFTQEDLQK ATLPYYREHGENEEHFGIGLHICALLCGKHGGTLSIANSMYGGAVVTASFNCLYNIYSES >gi|224461044|gb|GG657760.1| GENE 113 119831 - 120505 803 224 aa, chain - ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 4 224 3 230 230 168 42.0 7e-42 MEYKILIADDEQGIIQLLKDYFEIQGYRVLEALNGAEVLEKLARKPDIILLDVSMPGIDG FEVCRRIRSHISCPILFLTARIEEQDRINGLKLGGDDYIMKPFSIEELGARVEAHLRREE RKRLNGSVLMSDRLAIRYSERSVYYENDQVNLTKMEFDIVELLSMNPGQVFSKDQLYEKT RGYDGAGDSSIVTEHIRRIRTKLAEYTEKSYIETVWGVGYKWIG >gi|224461044|gb|GG657760.1| GENE 114 120615 - 120935 318 106 aa, chain - ## HITS:1 COG:PA4392 KEGG:ns NR:ns ## COG: PA4392 COG3695 # Protein_GI_number: 15599588 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Pseudomonas aeruginosa # 8 101 30 123 127 77 46.0 5e-15 MKEKNTFDKIYDVVGQIPEGKVASYGQIAELAGNRRWARVVGYALHVVPDSMHLPCHRVV TKEGRVSGAFLSGGVNRQARMLEEEGVEIEEDRVDMRKYQWSKRIF >gi|224461044|gb|GG657760.1| GENE 115 120955 - 121386 606 143 aa, chain - ## HITS:1 COG:no KEGG:DSY1202 NR:ns ## KEGG: DSY1202 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 143 4 145 145 138 53.0 6e-32 MNGNAEMLNYVYQNTQMGIESLKQLLEIVDNDDFRKCLEKQLGGYRDINTKAKKMLNENG FDEKGIPGMEKITSYLMINMKTLIDKSSSHIADMLIKGSSMGIVEATKQLHKYEGDVEKD IISLMKELQKMEEHNVEELKKYL >gi|224461044|gb|GG657760.1| GENE 116 121568 - 123046 1509 492 aa, chain - ## HITS:1 COG:CAC0528 KEGG:ns NR:ns ## COG: CAC0528 COG0488 # Protein_GI_number: 15893818 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 492 1 492 492 617 59.0 1e-176 MSMINVTDLSFAYESSYDNIFEHVSFQIDTDWKLGFIGRNGRGKTTFLKLLLGKYEYDGT ISASVEFEYFPYEVKDAGRMTVEIVQEMKPQAQVWEIMRELNLMEVAEDVLYREFDTLSH GERTKVMLAALFLGSGRFLLIDEPTNHLDTKARAEVAAYLNRKKGFILVSHDRHFLDACV DHILSINKMDIEVQKGNFTTWYTGKEARDRMEAAQNEKLRSEIKRLTKAARQSENWSDKV EKTKKGERVAGLRPDRGAIGHKAAKMMKRSKVLEKRQHMALEEKSKLLKNIDFAETLRLE PLAYHAHRLAELQDVAVRYGEREVCRGVSFEICRGDRICLSGRNGCGKSSILKLLLGEDI PHTGQMQTGSGIKISYVPQDTSHLRGTLKELASEYAIEESLFKMMLRKLDLERVQFEKDI ADYSAGQKKKVLLAKSLCEQAHLYVWDEPLNYIDVLSRLQIEELIQNAGPTMIFVEHDEA FREKIATKVCQL >gi|224461044|gb|GG657760.1| GENE 117 123367 - 124008 235 213 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 188 1 199 223 95 32 4e-18 MMSIIELRNVSYYYTPGRYILNHVNVSFAAGKMYVITGPSGCGKTTLLSLLGGLDTPKEG AVFYRDSEITGAGLEKHRRNNVSFVFQNYNLIEYMTSIENVRLTAKTDPLPILERLGLSA EESGRNILKLSGGQQQRVAIARALASQSEVILADEPTGNLDQETAVEITEILRESASEYK KCVIIVSHSEEVAHMAEEVYELSEGKLQKRRFC >gi|224461044|gb|GG657760.1| GENE 118 124018 - 125502 888 494 aa, chain - ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 3 412 1 375 459 133 27.0 6e-31 MSLLKRAFLYVARKKTRSILLLLVTCVMSAFLLIGISIKSSADQAAKELRKSMGGSFIVK IDNNAPERCEAVTHESGYSYIRYKGPFITEEMLQSILAVEGVSGYTVNHNYMSLFVDLEL FPGMYADMYKDIVENDYPDKDPPDRRADYQVAMNSTLLFGEKDSQMQEYFRSGALTLVSG RHLTKGDERQALISADMAKRNDLTIGDTFTVENKEGNVMISDDPVRSMGPPVELTVLGIF DVNFQQEISIFTTEDMIAHNYIFTDTDTYTQLREYRGIKEDSAYSELTFFVDDPQMSDRV LNKVRSLKNIEWDKYILKLDDSSYRASIKPLQRMSGFSAFLMTASVLGVLTVQYLILNMW TRGRRKEIGILLSIGIQKRMIRMQLILESVMICAAALMLALCIAGFASGHLGRLAERAAA PDAGGDAFTVEYDTGELAPDIDKVSASPVQLSYPVSPANIFAVAVLTLGVTVLSVFLASI QALKMKPKDILSSI >gi|224461044|gb|GG657760.1| GENE 119 125516 - 126769 880 417 aa, chain - ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 95 416 89 386 387 100 27.0 6e-21 MTGITISNAAGKAADGLRNTLGGYFKLEEDPEYAGKREAITDTLAERIEKLDGIERSNKI NTEYLYTPKLTLRAGRFSREGDIKAQMARFLGNSDSSLNEFFIRRSFCLTKGRHIGPGDV EKAVISESLADINELDIGDFIEGVLYTQDNSRVLGNYKWEVIGIFAENTVQESSGLTAEC DLRDNFIFVDETSLMNVQTDESEENAGKYREAVFFLEDPARSDQVVKEVFRLDGVNWDSF CIKENNKAYEKAAAPLKKLRLQTEVLLLMIIGISIVLVTLLLFMWMRERLREVGILRSIG ISKLSVIGQHMTETLLVVLAALVLTVPATHLLTDYAQKRIADTDVVVEDQKNELRQITDA PADSEETEEYVEITVSVGRKEFWFVVLYGLGLSAAAVGVSSIRIIRMKPRDIMAALE >gi|224461044|gb|GG657760.1| GENE 120 126894 - 127580 467 228 aa, chain - ## HITS:1 COG:BS_lytT KEGG:ns NR:ns ## COG: BS_lytT COG3279 # Protein_GI_number: 16079944 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Bacillus subtilis # 1 224 1 239 241 99 28.0 5e-21 MIRIAIIEDEPIYCDELVCLLQECAGSKTMEINCFASGEEFLESGRTDNSYAAVFVDIEL KGINGLELARIMRSTGYKNMLVFTTNYEQYVYDGYEVEAFRYLRKPVKKQDVQSCLDRVS RNMREAMLVFSFNRKKYSISYRDIIYISSYGHYLTIHTAEQDYKWKYLIKDLQPHLPEQF IRCHRSFVVNLDFMRKLDGKRLVLKNGGEIDVAGNYLPSVRKAITSTI >gi|224461044|gb|GG657760.1| GENE 121 127558 - 128910 947 450 aa, chain - ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 153 434 161 450 452 82 22.0 2e-15 MNMHWFLWGILLTAMEIFLKYYLLERRLGSGKNGMKPIVGALIIFILMAVFRSMPVNSSF LLGINFLVTIGYAYATFGSGQIARIVWGCFAGLLPAITDTLAVLIAETFHYGDLSGMWSP GSVWFYITATSLMIEIIIVLTAANIKSYSTYSLTVRQLLFLVGMSAVSIIALNLQMEIVS TLANMLGTQKAQYEAVFVSLCFLIILTALIFLVYSLGKQSQKTIEKTLEARQEHLEKEYY RSNEVSVNALRGLRHDISTHMHVMKRLMDEGRTEELREYFDSVENQYRKSSALFLTEDTM LNALLTSKQMTAQNSHINMQLSYATKRRIPLSTADLCSLMGNMIDNAMDACKKVTDEKLR YIDISVGDRGEMIYIKVKNGSDGTYHIVDGELQTTKTGTGHGIGLKRIRSIAESAGGFFD INPRPDVFTAIVMLPSEQKEGDHRDQNRHN >gi|224461044|gb|GG657760.1| GENE 122 129110 - 129661 310 183 aa, chain - ## HITS:1 COG:STM1605 KEGG:ns NR:ns ## COG: STM1605 COG1396 # Protein_GI_number: 16764949 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 183 1 176 178 123 33.0 2e-28 MDPMNMIVAKNIRRLREENKLSMEELSKLSSVSKSMLAQIERGEANPTISTLWKISNGMK VPFDHLTVRPKTSYEIVNTSEIQPLLEDGGRVKNYPVFPDDENRRFAVYYLELDKGSYWE SEPHLKGTTEFITIFAGCVEISAGGQQFTVGRGESIRFRADSTHSYKNTGDETAILHMII YNP >gi|224461044|gb|GG657760.1| GENE 123 129827 - 130408 533 193 aa, chain + ## HITS:1 COG:yfiK KEGG:ns NR:ns ## COG: yfiK COG1280 # Protein_GI_number: 16130503 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 4 192 6 194 195 126 39.0 3e-29 MFHLSDFLIYCFVTAYTPGANNLLSMSNAVRLGIRRSYRFNLGILAGFVIVMTACMVFST TLFALLPKFKFVMQILGAAYMLYLAWKVWKSSVDPSADPSKEASFLSGMILQFANPKIYI YAVTAMTLYILPVYHSAGALIGFTILLALVGASGSFVWALCGSVFCKYLSRHTKGVNIVM ALLLIYCAASLFL >gi|224461044|gb|GG657760.1| GENE 124 130457 - 131668 1267 403 aa, chain - ## HITS:1 COG:NMA0365 KEGG:ns NR:ns ## COG: NMA0365 COG1457 # Protein_GI_number: 15793373 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Neisseria meningitidis Z2491 # 12 388 15 398 437 300 49.0 3e-81 MEKRRTSLFENGLIWFGAGVSIAEILTGTYLAPLGFGKGLAAILIGHVIGCTMLFFAGLI GARTRKSAMETVKMSFGQKGSLLFSLLNVLQLAGWTAIMIYDGALAADGVIKTGAWLWCL VIGALILLWIAIGITNLGKINTVAMAALFVLTLILSKVIFFGGAHAGIISGEGMTFGAAV ELSVAMPLSWLPLISDYTREARSPVKATAVSAVVYGVISCWMYVIGMGAAIYTGVYDIAQ IMLKAGLGIAALLIVIFSTVTTTFLDAYSAGISSESIAAKLNGKYVAAAVTVIGTGAAIL FPMDNITDFLYLIGSVFAPMTAIQIADFFLLKRDSSKTAVNTASLLVWLAGFAAYRILMN IDMPVGNTLPCMVITVALCVIAQLRTKRGRDAKALQTPGEADL >gi|224461044|gb|GG657760.1| GENE 125 131668 - 132495 870 275 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 261 4 264 265 317 59.0 1e-86 MRTALTIAGSDSSGGAGIQADIKTMTANGVYAMSAVTALTAQNTTGVTGIMEVTPQFLKE QLDNIFTDIRPDAVKIGMVSSGPLIETIAAALRKYGAEHVVVDPVMVATSGSRLISGDAV AVLKAELLPLAEVLTPNIPETEELSGMPVRTEEDMAAAAEYIGRTYHCAVLCKGGHQLND ANDLLYRDGGLRWFRGKHIDNPNTHGTGCTLSSAIASNLAKGYDMADAVERAKAYISGAL SAMLDLGHGSGPMNHAFDLRSEFIETEHMDGEVWL >gi|224461044|gb|GG657760.1| GENE 126 132599 - 133261 537 220 aa, chain - ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 2 207 5 210 215 119 35.0 5e-27 MIRGAIFDVDGTLLDSMPIWEEAGERYLTSREIVPERGLGQRLYPMTMEEGACYLKHTYG LPESTGDIISGINRQIEQFYRYSARLKPGAAEFLEGLRKKGVRLTAATSSDRHLIEAAFT RLGIGPYFERIFTCTEVGEGKDKPKIFREAAACMGTAPEETLVFEDALHAIDTSLGSGFK TVGVYDTSSEDRQEEIRAKVHIYMSEYRAFDLFWESASRC >gi|224461044|gb|GG657760.1| GENE 127 133258 - 133914 777 218 aa, chain - ## HITS:1 COG:CAC0495 KEGG:ns NR:ns ## COG: CAC0495 COG0352 # Protein_GI_number: 15893786 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Clostridium acetobutylicum # 15 206 8 199 211 177 47.0 1e-44 MKEHVMKFDKKSLLLYAVTDRRWLKGSTLTAQVEEAIRGGATFIQLREKNLDEEQFLREA REVQQLCRSFHVPFVVNDNVEIAAAIDADGVHVGQSDMEAGDVRARLGHDKIIGVSAQTV EQALLAQERGADYLGVGAVFSTGSKADAVEVSHDTLKEICRAVEIPVIAIGGIGRENVDM LAGSGICGVAVISAVFGAPDIRQAARELRGAAEKMVGV >gi|224461044|gb|GG657760.1| GENE 128 133886 - 134707 980 273 aa, chain - ## HITS:1 COG:CAC3096 KEGG:ns NR:ns ## COG: CAC3096 COG2145 # Protein_GI_number: 15896347 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Clostridium acetobutylicum # 1 271 1 271 273 308 58.0 1e-83 MLGNCIDEVRKQGTLVHNITNYVTVNDVANILLACGGSPIMSDEAEEVEEITSICSGLNI NIGTLNRRTIEAMYIAGRKAKELGHTVLLDPVGAGASSLRTETAARLMKEIKFDVIRGNI SEIKTLSRGSGSTKGVDADVADAVTEDNLDEAVAFVKAFASETGSITAVTGAIDLVSDGA DCYVIRNGRPEMGRITGTGCQLSGMMTAFVAANKEQKLKAAAAAVCAMGLAGETGFKYMR EGGGNASYRSLIIDAVYNMDGKILDEGARYEIR >gi|224461044|gb|GG657760.1| GENE 129 134950 - 135507 642 185 aa, chain - ## HITS:1 COG:BMEI0508 KEGG:ns NR:ns ## COG: BMEI0508 COG0782 # Protein_GI_number: 17986791 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Brucella melitensis # 23 168 6 152 157 89 39.0 3e-18 MISGDTIKNERVRKAGDFVREQLTKSDVQKIKEEIEYRKLVVRKKELEAVKEARAQGDLS ENFEYKAAKQDKNRNESRIRYLEKMLKTARIVSDTSREDEVGINNTVELYFEEDDETEKY RLVTSVRGNSLEGRISIESPLGKAILGHKEGERVKVTANGGSGYYVVIRAIDKSSDESGD TIRKY >gi|224461044|gb|GG657760.1| GENE 130 135527 - 136168 795 213 aa, chain - ## HITS:1 COG:MA3709 KEGG:ns NR:ns ## COG: MA3709 COG1878 # Protein_GI_number: 20092508 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Methanosarcina acetivorans str.C2A # 2 210 12 240 245 108 33.0 7e-24 MEIIDLTYTIDKDIPVWPGTPKPRLGSLCSYGKDGFRETALELTSHMGTHMDAPAHLFAK GKTLEQFPAAHFIGKAVVIDCTGIKEGEYITCKYIEPVRELADAADFLLFRTGWEKFWGQ EEYMRRSPGLEVDTAKYIARAGKKGVGIDTMSIDAAEARELPAHKVLLGTNQMVIIENLC RLKELGSGLSDLIALPLKYEYADGAPVRAMAYI >gi|224461044|gb|GG657760.1| GENE 131 136280 - 136492 221 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 1 65 1 65 67 89 69 2e-16 MAIILRLDRVMADRKMSLNELSVKVGISNVNLSNLKTGKVKAIRFSTLEAICDVLDCQPG DILEFEREEK >gi|224461044|gb|GG657760.1| GENE 132 136593 - 137219 662 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570874|ref|ZP_03779897.1| ## NR: gi|225570874|ref|ZP_03779897.1| hypothetical protein CLOHYLEM_06978 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06978 [Clostridium hylemonae DSM 15053] # 1 208 1 208 208 409 100.0 1e-113 MRRKRSVEITGCLDEAGQTHYDTCELFLKFAIAIYIVRMIAGVVNIVYAGLQPDVAITEK GGYWVFDLLVGTSRISPDYLPAGTQIIDNRVLTIGFLLTAMAVNFTPMLFVMNYIRNILR TIDNSHSPFVPEVVSNIRKAGRTLILIGVFSKLILKIMLQLLACHSLYSFGIPDDLQLSW IFAGVIVLLVSDIFRRGCELQQFSDETL >gi|224461044|gb|GG657760.1| GENE 133 137490 - 137861 455 123 aa, chain + ## HITS:1 COG:TP0823 KEGG:ns NR:ns ## COG: TP0823 COG2033 # Protein_GI_number: 15639809 # Func_class: C Energy production and conversion # Function: Desulfoferrodoxin # Organism: Treponema pallidum # 3 119 6 125 128 96 40.0 1e-20 MGNFYKDQNSQNIFLELMTLAEQNKAPQLEKLNANTTDAAQEKHVPVITVNGNKVEVAVG SVSHPMQEEHSITVIFIETKKGGQYRRLSPGEEPKAVFTIEDGDEFIAAYEYCNLHGLWK AGA >gi|224461044|gb|GG657760.1| GENE 134 137910 - 138071 320 53 aa, chain + ## HITS:1 COG:alr1174 KEGG:ns NR:ns ## COG: alr1174 COG1592 # Protein_GI_number: 17228669 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Nostoc sp. PCC 7120 # 2 53 181 233 237 80 58.0 9e-16 MKKYLCEPCGYVYDPEVGDPDGGIAPGTAFEDIPDDWVCPVCGLGKDVFIVEE >gi|224461044|gb|GG657760.1| GENE 135 138075 - 138752 552 225 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 8 224 14 227 229 77 26.0 3e-14 MNVEKLSLFQGLTEDEIKRSLTCSRAFVKTYGKDEYVFRQEDTPEHLYFILNGEVELGQI NALGRQNYVDFVKEGQGFGEVDLFLEHESYAYFAAARQETEVLAVSRHFFYSTCEKNCAH HSRIIFNMMRLFAEEAEKKTKKIHLLTCGTLRQRIAYYLSELSAGNADIRLPMNREDLAA YLNTARPSLSRELSWMQDKGILSISGRNHIHILDFRRLQDEIEGM >gi|224461044|gb|GG657760.1| GENE 136 138768 - 139457 673 229 aa, chain - ## HITS:1 COG:no KEGG:Cbei_3033 NR:ns ## KEGG: Cbei_3033 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 229 2 233 233 240 47.0 3e-62 MKKERIFWGLFFIVSAVFLIVSRMGVLGDIGVFSLLLTVFFAACLIKSVVHRSVTGVLFS VAFLCIIYARPLGIEPITPWPVLGAALLGSIGFSFLFHPRRSCYHHHHIDSEESVETVDG AQMEFSTTFSGSIKYVNSDDFQSARLHCAFGSLKVYFDNAVIQRGEAVLDLDVSFAGVEL YIPKNWSLVNKTSTAFGGIDEKNRNDSSGGPVVRLKGKVSFGGVEIVYV >gi|224461044|gb|GG657760.1| GENE 137 139465 - 139917 564 150 aa, chain - ## HITS:1 COG:SP1915 KEGG:ns NR:ns ## COG: SP1915 COG3279 # Protein_GI_number: 15901739 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 1 150 2 149 149 129 49.0 2e-30 MKIRIEIEDNLKEAEIIIRSSVLSEEVQKIQKAVADVVSMEQRLVFYKGDTSYYLPLEEI LFFETEDNEVYAHTRKEIYRTKYRLYELEEMLPGFFMRVSKSAILNTRKIYSMTKSLPAS CTVEFQGTHKQAYVSRYYYKPLKDRLEEKR >gi|224461044|gb|GG657760.1| GENE 138 140028 - 140291 296 87 aa, chain - ## HITS:1 COG:no KEGG:ELI_2856 NR:ns ## KEGG: ELI_2856 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 87 1 87 87 94 54.0 2e-18 MKVIVKTKDLNFRMPVPLRMAGFLIKKLPRSAFEKMRAEVPEPYACLITKENICMIVEEC TDVLRENKGLEVVHVEAEDGTFVSIRL >gi|224461044|gb|GG657760.1| GENE 139 140303 - 140680 516 125 aa, chain - ## HITS:1 COG:no KEGG:ELI_2857 NR:ns ## KEGG: ELI_2857 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 123 1 138 139 102 43.0 5e-21 MDERLRVLKMIEEGTITAEQAAELLNAMGVEEAGEPPARTNYDKKMFRIIVDGSGDKVNI QFPVGAVKKILKVTGRLPIPEKELQGVNLEEMMDAISDCLDGEIEGDLVSVEAADGTRVR IYVDK >gi|224461044|gb|GG657760.1| GENE 140 140706 - 141071 436 121 aa, chain - ## HITS:1 COG:CAC3001 KEGG:ns NR:ns ## COG: CAC3001 COG3877 # Protein_GI_number: 15896253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 3 120 4 120 131 129 54.0 2e-30 MKKVISQCPVCSGELKVTRLKCSDCDTVIENDFTLSKFDYLSGEELYFTETFIRCRGNIK EVEKELGISYPTVRAKLDGIIRKLGYEEDAKQDEEMQKREAVLKALELGQITAEEAIRRL K >gi|224461044|gb|GG657760.1| GENE 141 141208 - 142590 1568 460 aa, chain - ## HITS:1 COG:lin2873 KEGG:ns NR:ns ## COG: lin2873 COG0534 # Protein_GI_number: 16801933 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 9 434 4 431 450 216 34.0 8e-56 MGEGQDNVQFDKMTKTPVPNLIIRLGIPTVVSMLITSIYNTADTYFVSRLGTSASGAVGV VFSLMAVLQAFGFMFGHGAGSIISRKLGKKDKESASRFASTSFFLAIAAGVFIGAAGIAF LTQFMRLLGSTETILPYAKQYGFYILLAGPFMTGSCVLNNILRYEGRAAYAMIGLTTGGI LNMAGDPVLMFGLHMGVAGAGLSTALSQMISFLILLAMFLSGKTDSKLSVRLITKDVSDV VRIVTTGFPSLIRQGLGSVSTLLLNHQAAVYGDAAVAAMSIVNRICMLIFSVGLGLGQGF QPVAAFNYGAEKYDRVKKGFWFTAAAGEAVIGSLAAVCLLVSAQVIGVFRNDPEVIRIGV FALRCQCVACFFQPAAVCTNMMFQSVGESGKASFLSSLRSGICFIPLILILPAVFGLRGV QTAQTVADVLAFLISAPLAVWFLRKLDRKGQDGAGDDGGI >gi|224461044|gb|GG657760.1| GENE 142 142747 - 143403 516 218 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01749 NR:ns ## KEGG: EUBELI_01749 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 218 1 213 213 73 27.0 7e-12 MKGLLIKDFKLLKGQKNFFFIVCLVGVMLMVTSASPSYVISYMTFVFSMFTLSSVSYDEY DNGLAFLFCLPVTRKKYVREKYVFGFLLGGTAWTVSTIVISVYAMMRDPGVKWQSWLDTA GAYLLLFLLFLLIVLPIQFKFGAEKGRIVMVSAIGILILVCYVGMKAAKWLNADVDIILA RLSAAAPGRLFAAALVICCVMAVISYKVSLNIMKKKEF >gi|224461044|gb|GG657760.1| GENE 143 143403 - 144251 909 282 aa, chain - ## HITS:1 COG:SA0339 KEGG:ns NR:ns ## COG: SA0339 COG1131 # Protein_GI_number: 15926052 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Staphylococcus aureus N315 # 2 240 4 243 280 152 39.0 5e-37 MLVEMEHVKKHYKGFELDCSLNVEEGRVTGLIGPNGAGKSTAFKSILGLIGIDGGSAVVL GKQAEQLSTEEREQIGVVLSDSGFSGYLTVNDIIPVLNNLYRRFDRDHFLRMCEEFNIPR SKKLKEFSTGMKAKLQVISAMCHGARLLILDEPTAGLDVIARDELLDLLRGYMEEGDRSI LISSHISSDLEGLCDDLYMIVDGRITFHEDTDVLLDQYGILKLTEEQYDKIDKEYILARK KEGFGISCLTAHKQFYMENYRDIVIEKGSIDKVITMMIRGEA >gi|224461044|gb|GG657760.1| GENE 144 144254 - 144625 425 123 aa, chain - ## HITS:1 COG:BH0651 KEGG:ns NR:ns ## COG: BH0651 COG1725 # Protein_GI_number: 15613214 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 123 1 123 123 91 47.0 3e-19 MKLIINNSSMQPIYEQIVTQIRTMIMKGTLKEEEMLPSVRVLSKELRVSALTVKKAYDAL EQEGFVVTVHGKGSFVTCANQELMMEEKRREVEADMEAAIRKGKSCGMNNEEITQLFHIL LEE >gi|224461044|gb|GG657760.1| GENE 145 144794 - 145630 280 278 aa, chain - ## HITS:1 COG:MA4656 KEGG:ns NR:ns ## COG: MA4656 COG0500 # Protein_GI_number: 20093435 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 23 255 2 234 257 189 39.0 4e-48 MLQLLRPYLRKPTLFEKSKTKFWDDPYISQSMLKAHLEPDLEGATRKHDFVKQSVDWISN LLPICRYKRIIDLGCGPGIYAELFHAKGYQVTGMDISENSIQYAQKTAKERGLDISYKKG DYIQCPIGGEYDLATMIYCDMGVLSHAERKALLRKIFDALAPGGCLLFDVFTPHEYEHRT EFKIWNYEEGGFWREKPYLLLHSLYRYDYDNTFLNQYIVITDKDVTCYNNWEHTFVIEEL EQELREAGFQSLQFYGDAAGAEYTQNSKTICVAARKDI >gi|224461044|gb|GG657760.1| GENE 146 146023 - 146298 281 91 aa, chain - ## HITS:1 COG:no KEGG:COB47_0934 NR:ns ## KEGG: COB47_0934 # Name: not_defined # Def: hypothetical protein # Organism: C.obsidiansis # Pathway: not_defined # 2 82 4 84 113 102 58.0 5e-21 MFPKVVQVIPTKDYSVYVYFEDGKIVCYDMAAMIEKEVFRPLKDLDVFMDTCTVMNDTLA WDIGGNRDNTMCLDIDPDTLYELPFAKEEIA >gi|224461044|gb|GG657760.1| GENE 147 146847 - 147074 227 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570892|ref|ZP_03779915.1| ## NR: gi|225570892|ref|ZP_03779915.1| hypothetical protein CLOHYLEM_06996 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06996 [Clostridium hylemonae DSM 15053] # 1 75 4 78 78 123 100.0 4e-27 MLCMECGAKAYKGLTTDVTDLGSCLVIVRNVPCYKCTECNEVIYTADVVKQLEKIVEQAK KVMQEISIIDYRKVA >gi|224461044|gb|GG657760.1| GENE 148 147080 - 147412 158 110 aa, chain - ## HITS:1 COG:no KEGG:TepRe1_2398 NR:ns ## KEGG: TepRe1_2398 # Name: not_defined # Def: hypothetical protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 9 109 3 103 104 106 49.0 3e-22 MMLGGVALYQIDNFKEMNRLEKIAITKHAKERLEERGIKVDDITYCIDTGEIIKQYEDDK PLPSCLILGETTDNKYMHIVLSRGKDFIYLITAYYPDPAQWESDLKTRKE >gi|224461044|gb|GG657760.1| GENE 149 147504 - 147896 585 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240144422|ref|ZP_04743023.1| 30S ribosomal protein S9 [Roseburia intestinalis L1-82] # 1 130 1 130 130 229 85 1e-58 MANAKFYGTGRRKKSIARVYLVPGTGNITINKRSIDEYLGLETLKVIVRQPLVATETDGK FDVIVNVKGGGYTGQAGAIRHGIARALLQADADYRPVLKKSGYLTRDPRMKERKKYGLKA ARRAPQFSKR >gi|224461044|gb|GG657760.1| GENE 150 147925 - 148353 620 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239623392|ref|ZP_04666423.1| ribosomal protein L13 [Clostridiales bacterium 1_7_47_FAA] # 1 142 1 142 142 243 81 9e-63 MKTYMASPDKIERKWYVVDAAGYTLGRLASEVAKVLRGKNKPEFTPHIDTGDYVIVVNAK DIKVTGKKMEQKMYYNHSDYVGGFKETTLAEMMDKKPEKVIELAVKGMLPKGPLGRAMIK KLHVYAGPEHEQQAQKPEELKF >gi|224461044|gb|GG657760.1| GENE 151 148374 - 148445 65 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNQFEPKPRNRLTSEYNNNFNGM >gi|224461044|gb|GG657760.1| GENE 152 148530 - 150170 1785 546 aa, chain - ## HITS:1 COG:no KEGG:BDP_1333 NR:ns ## KEGG: BDP_1333 # Name: not_defined # Def: arylsulfate sulfotransferase # Organism: B.dentium # Pathway: not_defined # 55 541 54 554 555 412 47.0 1e-113 MKKRKSIAICLAAAAAGIVTSVSAVKAISETDDSRKQTDVETAALTKEQEMSLQKIKETY NVSKQEETARELEEKKNSQNYTADNMLTVYDPFGTNTQSLYVYFNTDEAVSAAYTVHAAG EAAGDFSRQVYEDGTYETEHEFQVIGLVPDTVNHITITLTAEDGTVTEREIDHEMGSLLG TEEVQLDVTEKGNAAELEDGLYVVLGNDSTALDFIYYYDNEGTLRGEVPILGYRGHRLIF DDDHMYYSISETKMAQVNRVGQVTNVYDLGNYELHHDYVFDNDGNMLILASDQTQDSIED IILCLDTDTGGVTEALDLEELFGSYKDECTADDDGELDWMHINTIQWLGDGDILLSSRET SSIIKVEDLYGTPEVSYIIGSKSFWEDTEYESLVLEQNGDFTVQGGQHSVTYVEDDGLGD GRYYLYMYNNNIGMSETNPDFDWASEGLTEDSAKEGETSYYYEYLVDEDAGTFELTDSFE VPYSGYVSSAQNLETNTVIDSGFKGLFAEYDKDHELIASYTMNVEKFIYRVYKYNFDGFY FNRKKS >gi|224461044|gb|GG657760.1| GENE 153 150271 - 151062 796 263 aa, chain - ## HITS:1 COG:CAC3359_2 KEGG:ns NR:ns ## COG: CAC3359_2 COG0778 # Protein_GI_number: 15896602 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 82 263 1 191 191 132 36.0 9e-31 MIQIDKEKCIGCGACKRDCPADAIKIREGKAEVFKDCLHCGHCVAVCPVNAAAIPEYDMA EVEAYEKEKFTLDADHYLRAVKFRRSIRSYTPEKIGRETAERILNAGRYTATARNRQACT YVFIQDRLDEFKELVWKEIPSIVENLRESAPEYARTFEYFYLKWKRSPEDDTFFFNTPAF LVIASDNPLDGGLAAANIENMAVAEGLGALYSGYMMRVIGASQALRDWLQTGEKKISCCM LLGYPAVSYKRTAPRRKADIIWK >gi|224461044|gb|GG657760.1| GENE 154 151185 - 152537 1227 450 aa, chain + ## HITS:1 COG:TM0815 KEGG:ns NR:ns ## COG: TM0815 COG0534 # Protein_GI_number: 15643578 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Thermotoga maritima # 12 439 18 445 464 177 29.0 3e-44 MRKNVDLLNGPVLSSLTRLALPIMATSLVQMAYNLTDMIWIGRIGSNAVAAVGAAGMYMW LSNGLATLAKMGGQVNVGHALGAGQTSDASRYADNAFQLTAFCGIIYGLVCVLLNGPLIG FFRLNSPHVIADAKIYLQITCGFVIFSFLNQTFTGILTAVGNSRSSFLATSAGLVINIVL DPVLIFGLGPFPELGVMGAAIATVVAQCIVTMMFFYFASKDTQVFRSIKITEKPDRKYMM PIIKIGLPTSIQSIIFTGMSMIIARLVAGYGDAAIAVQKVGSQIESISWMTADGFAAAVN SFVAQNHGAGNRSRIKKGYTSAMGVVLVWGVICTLLLILCPAPIFNIFISEPDVLPLGVD YLMILGVSQLFMSVEITTAGAFAGFGRTVPPSVVGIVLTAARIPFAMLLTQTALGLNGIW WSITISSIFKGIILLIWFLLFLKRRGAAPS >gi|224461044|gb|GG657760.1| GENE 155 152570 - 153034 465 154 aa, chain - ## HITS:1 COG:no KEGG:Daud_1142 NR:ns ## KEGG: Daud_1142 # Name: not_defined # Def: acetyltransferase # Organism: D.audaxviator # Pathway: Arginine and proline metabolism [PATH:dau00330]; Metabolic pathways [PATH:dau01100]; Biosynthesis of secondary metabolites [PATH:dau01110] # 42 143 44 147 151 63 36.0 3e-09 MSEKLIYTMDYASLVDLFVRAGLEISPDEPEPEGLLTCFELIDEAAGRRIGAAGIVYDKG EYILRCVAVEEEFRGKGFGKRLVGAVMDEAGRRQADRIWLTAKVPDFYRKFGFTVVPREE APFETKCITCPQYHNGCDSEVMVYYWGNHKGTAQ >gi|224461044|gb|GG657760.1| GENE 156 153254 - 154567 1350 437 aa, chain + ## HITS:1 COG:CAC2686 KEGG:ns NR:ns ## COG: CAC2686 COG0366 # Protein_GI_number: 15895944 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Clostridium acetobutylicum # 2 395 3 403 451 369 45.0 1e-102 MWAYNSVFYQIYPIGFCGAPVHNDGLCVPRIQKIKDWADYLEELGVDSIILNPIFESDSH GYDTRDYTKVDCRLGTNDDFKEVCGALHSHGIKIILDGVFNHVGRGFWAFKDVQEKKWDS PYKDWFHINFDGNSGYDDGFWYEGWEGHFELVKLNLQNPAVTDYLLDCIRGWINEFGIDG LRLDVAYSLDHNFMRRLRSFTSELKPGFTLIGEVLFGDYNLIVNDEMLHSCTNYECYKGI FSSFNSMNMFEIAHSLHRQYGSDQWCLYRGKHLITFVDNHDVERIASILTDKNHLPLAYG LLLGMPGIPCIYYGSEWGEPGEKRPDNDYALRPCFEAPKPNELTEYIKKMIRIRQNSEAL CNGDYKNVVIQNHQLIFERCFGGERVLVAINAADQPYTAAHGSFEGSAAELLSGKEVTLG GQIDLPPYSVQYFKMVP >gi|224461044|gb|GG657760.1| GENE 157 154714 - 155220 603 168 aa, chain - ## HITS:1 COG:FN0320 KEGG:ns NR:ns ## COG: FN0320 COG1853 # Protein_GI_number: 19703665 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 16 167 16 177 180 81 35.0 8e-16 MAFKEKAIEELSFNPFEKISKQWMLITAGDELKSNTMTASWGGVGIMWGRPVVTAYIRPQ RYTKEFVDMNDTFTISFLPETQRKALNVCGSVSGRDVEDKWKEAGLHPYYADGTAAVEEA EMIFVCRKLYYQEMYPECFTETECDTKWYPEADYHTMYIAEITKVLVK >gi|224461044|gb|GG657760.1| GENE 158 155259 - 156482 846 407 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 7 406 13 416 418 330 42 6e-89 MGIYEELQARGLIAQVTDEDEIRELINNGKATFYIGFDPTADSLHVGHFMALCLMKRLQD AGNKPIALIGGGTGYIGDPSGRTDMRSMMTPETIQHNCDCFKRQMSKFIDFSEGKALMVN NADWLLDLNYIDMLREIGPHFSVNRMLAAECYKQRMEKGLTFLEFNYMIMQSFDFYMLYQ NYGCNMQFGGDDQWANMLGGTELIRRKLGKNACAMTITLLLNSEGKKMGKTQNGAVWLDP EKTSPFDFYQYWRNVGDTDVLKCIRMLTFLPLEEIDKMDGWEGAQLNTAKEILAYELTKL VHGEEEARKAQESARALFSQGAAAQMPTAEITGDDLEDGRIDILTLLLKSGLVPSKSEAR RAVQQGGVAVDGEKVTDIQEIFPSDAFAGEGMILKKGKKNFRKVVLK >gi|224461044|gb|GG657760.1| GENE 159 156938 - 157657 542 239 aa, chain - ## HITS:1 COG:no KEGG:Swol_1999 NR:ns ## KEGG: Swol_1999 # Name: not_defined # Def: hypothetical protein # Organism: S.wolfei # Pathway: not_defined # 8 230 8 230 237 253 52.0 5e-66 MDRREGACLMCGRELVYYDKAGKMKCSVCGQSFESHASCEEGHFVCDGCHAEKGITAIME GCQTTTSRSPIAVMQELMENPFIYMHGPEHHVMAGAALLAAYHNCGGDIDISQALEEMRA RGSEVPGGVCGMWGCCGAAVSTGIFMSIITKATPLTGRSWQMSNRMTSRALAAIADLGGP RCCKRDCFTAVKEAVAVVREETGIEMELPERIVCTFSKENRQCLRQKCPYHLDGSFPEK >gi|224461044|gb|GG657760.1| GENE 160 157663 - 158787 1308 374 aa, chain - ## HITS:1 COG:SA0656 KEGG:ns NR:ns ## COG: SA0656 COG1820 # Protein_GI_number: 15926378 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Staphylococcus aureus N315 # 1 372 4 388 393 263 39.0 3e-70 MLIKNVKVFKEDKTFEDGEIVIRDGLISGEREDGGEVIDGEGCYAIPGLIDIHFHGCKGY DFCDGTKEAIHEIAKYEASIGVTAISPATMTLPVEQLEEILATAAAYKKEAADEADLIGV NMEGPFISKEKKGAQDATYIIPCTKEIFHRFQSAAQGLVKYIGVAPEREGALEFVEQVKD EVNVSLAHTNASYEDAKAAYDRGADHAVHLYNAMPPFTHRAPGVIGAVADSEHVTAELIC DGVHIHPSVVRATFKMLGADRIILISDSMRATGMPDGEYTLGGLAVNVTGSRAILVSNGA LAGSATNLLDCMRTVVKEMGIPLETAVACATMNPAKSLGAYDKYGSLTPGKKGNVVLLDK ELNLKAVIKDGKRI >gi|224461044|gb|GG657760.1| GENE 161 158823 - 159656 1031 277 aa, chain - ## HITS:1 COG:SP1331 KEGG:ns NR:ns ## COG: SP1331 COG1737 # Protein_GI_number: 15901185 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 6 265 5 264 269 219 44.0 4e-57 MEYYVKSVVPIIESNYDNFTTVEKNIADFFIQNRKKMDFSARAVAELLFVSEASLSRFAK KCGYRGYREFVYQYEETFVEKKESMTGNTRMVLNVYQELLNKTYSLVDEVQVARISRYLN RAARVFVCGMGSSGLTAREMKLRFMRIGVDIDSIQDSDLMRMQAVFQNETCLVFGISISG EKEEVLYLLKEAHERGARTVLVTAKNNEEFDKFCDEVLLIPSLRHLNHGNVISPQFPILV MLDIIYSYYLEQDKYEKETLHDNTLRALQRKKPEKYI >gi|224461044|gb|GG657760.1| GENE 162 159679 - 160587 372 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 4 292 5 316 323 147 30 5e-34 MKKYVSIDIGGTAIKYGMIDEDGRILTKREMKTEAHRGGPSILAKASAIVEEFKNSEEIS GICISTAGMVDTEKGEIFHSAPLIPEYAGTRFKAVLEERFGIPCEVENDVNCAGLAESVS GAAVGSKSTLMLTVGTGIGGCIVLDGRIYHGFSNSACEVGYMRMCGSDFQTLGAASILTK KVAERKSEPVEYWNGYRIFEEAEKGDDICIRAIDEMADILSMGIANICYVLNPETVVLGG GIMAQEDYLKEKIEAAVSRYLIPSVADRTKICFARHRNDAGMLGAFYHFRERQSGERRKA EA >gi|224461044|gb|GG657760.1| GENE 163 160764 - 161216 528 150 aa, chain - ## HITS:1 COG:YPO3447 KEGG:ns NR:ns ## COG: YPO3447 COG2731 # Protein_GI_number: 16123595 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Yersinia pestis # 1 149 1 151 152 87 34.0 7e-18 MIFGNIRNLDEYPFLERQVKECFDYAGEHDLKAYEKGSHEIDGNRLFVNIVEYTTTDAQN RFWEAHRDYLDIHVMLTGQEQIDVNFIENMEQKEYVPADDFLPMDGEKNGHVVLKEGDFL ICAPHDAHRTAVQVNGPEAVKKAIFKVQIH >gi|224461044|gb|GG657760.1| GENE 164 161243 - 162748 1946 501 aa, chain - ## HITS:1 COG:SP1328 KEGG:ns NR:ns ## COG: SP1328 COG0591 # Protein_GI_number: 15901182 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Streptococcus pneumoniae TIGR4 # 3 481 5 484 513 534 65.0 1e-151 MQGFTVIDLVILIVYLAAVLFAGLHFAKKEMKGKEYFKGDGTVPWWVTSVSIFATLLSPI SFLSLAGNSYAGTWIMWFAQLGMLLAIPLTIKFFLPIYSKLDIDTAYHYLELRFGSKGLR VLGAVMFIIYQVGRMSIIMYLPCMVLGSLTGISVNVLIIIMGVIAIIYSYTGGLKSVLWT DFIQGSVLLIGVTFALVFLLANIDGGIGAVFHAFTAEHKFLAVDQPIFDVNVLKDSVFIM IVGAGLNTMGSYVSSQDIVQRFTTTTDTKKLNKMMLTNGALSIFIATVFYLIGTGLYVFY QQNALPPAAAQDQIFASYIAFELPVGITGLLLAAIYAASQSTLSTGLNSVASSWTLDIQA RLSKKELSFEKQTKIGQYVSLFVGIFAIIIAMVLANGGVKSAYEWFNGFMGLVLGILVGT FILGAFTKKANTFGAVAAFIAASAVMVGIKYFAPAGSVSIWSYSLISIAVSLVVGIPASL IWRKVKGDYSVPAPDTTVFKN >gi|224461044|gb|GG657760.1| GENE 165 162774 - 163691 1146 305 aa, chain - ## HITS:1 COG:SP1676 KEGG:ns NR:ns ## COG: SP1676 COG0329 # Protein_GI_number: 15901511 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 305 1 305 305 440 69.0 1e-123 MRNLDKYKGVIPAFYACYDKDGNISPEGVQALTRYFIEKGVKGVYVNGSSGECIYQSVED KKTVLENVMEAAEGRLTVIAHVACNNTEDSKILAAHAEKLGVDAIAAIPPIYFHLPEYAI AEYWNDISAAAPETDFVIYNIPQLAGVALTMDLFAEMRKNPRVIGVKNSSMPVQDIQMFK AAAGEDYIIFNGPDEQFMSGRVIGAEGAIGGTYGAMPELFLKLDELVKAGEMEAARDLQY AINSIIYKMCSAHGNMYGVIKEILKKNEGLELGGVRRPLPSLAGSDMAVVEEAAQMIMDA KAKYL >gi|224461044|gb|GG657760.1| GENE 166 163740 - 164426 936 228 aa, chain - ## HITS:1 COG:BB0644 KEGG:ns NR:ns ## COG: BB0644 COG3010 # Protein_GI_number: 15594989 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Borrelia burgdorferi # 5 225 4 225 232 254 57.0 1e-67 MNERIKQLEGKLIVSCQALPHEPLHSSFIMGRMALAAKEGGASGIRANTKEDIAEIKSQV DLPVIGIVKRDYENCSVYITPTMKEIDELMEVKPEIIAMDATTDRRPGGATLDEFFAQVR KQYPNQLFMADCSTVEEALHADELGFDFIGTTMVGYTKQSRHLKIEENDFEVLREIVAKV KHPVIAEGNINTPEKAKRVIELGAFAVVVGSIITRPQLITKSFADVLE >gi|224461044|gb|GG657760.1| GENE 167 164726 - 165451 879 241 aa, chain + ## HITS:1 COG:BS_ybfT KEGG:ns NR:ns ## COG: BS_ybfT COG0363 # Protein_GI_number: 16077305 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Bacillus subtilis # 1 241 1 243 249 251 51.0 1e-66 MKIYRAKDYEDMSRKAANIISAEVILKPDCVLGLATGSTPIGTYKNLIQSYENGDLDFSD VTSVNLDEYKGLGPDHDQSYRYFMNSNLFDHINIDKTRTFVPDGLEADSDKACAAYNDII AGCGGIDLQLLGLGHNGHIGFNEPADEFEKETHCVDLTESTIEANKRFFASEADVPRQAY TMGIKTIMQARKVLVVVSGSDKADILDKVVNGPVTPAVPASILQMHNDVIIVADEAALSK M >gi|224461044|gb|GG657760.1| GENE 168 165534 - 166475 1010 313 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1831 NR:ns ## KEGG: EUBREC_1831 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 312 5 313 314 241 35.0 2e-62 MAIPLFICTGLLDSGKTTLVKETLMEQDWIEPGVTLLLQCEEGEVEYEEAYLKEKDMAVL KIERPEQLSTEFLKNCEKQYHPAQVVIEYNGMWKLEELLKTQLPRGFELQGVYSTVNGAT LGMYLANMRNLLMEQLTESELIVVNRCPKGMDRSGFRRAVKVQNPMSQLIFEDMEGHIME PSEEDLPYDVKREIIEVGDTDFGVWYVDAYEHPQYYLNKEIRFLAQVFRPKGMEETMFVP GRKIMTCCAADIRFCGYPCKSGKKAVFEPRQWMRVRARFEYEAVTSFGSEQPVLYLIDLQ PARAPEEDTVYLG >gi|224461044|gb|GG657760.1| GENE 169 166502 - 167533 969 343 aa, chain - ## HITS:1 COG:FN0779 KEGG:ns NR:ns ## COG: FN0779 COG0523 # Protein_GI_number: 19704114 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Fusobacterium nucleatum # 3 340 2 294 294 152 28.0 1e-36 MTKVDIISGFLGAGKTTFIKKLIGEVFLDEKIVLIENEFGEIGIDGGFLKDAGVEITEMN SGCICCTLVGDFGRALQKVLKEHTPDRVIIEPSGVGKLSDIVRAVRDVKEEADIEIGSLI TVVDGRKAGLYLKNFGEFFRNQVEHASTIVMSRTQMMEDDKIEACVKMLRRENADAPVIT TRWDVLGGNAIQNALTAQKGQAGLLDGEHLHSHGAHACSHGHGHHTCSHSHEEHPHLHSH GENCGCEEHHHADEVFTSWSCESAHRYTEEELDYAVKALAETEGYGIVLRAKGIVQMTDG TWRQFDLVPEECEIRPGQPDYSGRLCVIGTDLREAELEKLFHV >gi|224461044|gb|GG657760.1| GENE 170 167775 - 169757 2566 660 aa, chain - ## HITS:1 COG:FN2030 KEGG:ns NR:ns ## COG: FN2030 COG3808 # Protein_GI_number: 19705321 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 12 654 15 668 671 587 60.0 1e-167 MEMLLKLVPVFGILALLFAAYLAAKVNRQEEGTDKMKEIAGAISDGAKAFLTAEYKILVF FVIVLFVLIGVGIGNWITAVCFVVGALFSTLAGYFGMQVATKANVRTANAAKTSGMNKAL SIAFSGGAVMGMCVAGLGVLGVSTIYLITGNVEVLSGFSLGASSIALFARVGGGIYTKAA DVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGALISALTLGIV YFKAPGAIFPLIIAGLGLIGSILGTFFVRGDEKSNPHKALKMGTYATSVIVVIVAFIFSN YFFGDFKAAIAIVAGLVVGLLIGIITEVYTSGDYKSVKEISEQSETGAATTIISGLAVGM KSTAVPILFICVGIFVAFQVCGLYGIALAAVGMLSTTAITVAVDAYGPIADNAGGIAEMS GLEPEVRRITDKLDAVGNTTAAIGKGFAIGSAALTALALFVSYAEAVHLKTIDILDNRVI IGLFIGGMLPFLFSSMTMQSVSKAAYQMIEEVRRQFKSMPGIMEGTTKPDYKSCVAISTT AALKEMLVPGIMAVAAPLVIGIVLGPAALGGLLTGALVTGVLMAIFMSNAGGAWDNAKKY IEDGNHGGKGSEAHKAAVVGDTVGDPFKDTSGPSINILIKLMTIVSLVFAPLFLSIGGLL >gi|224461044|gb|GG657760.1| GENE 171 169912 - 170673 864 253 aa, chain - ## HITS:1 COG:AF1959 KEGG:ns NR:ns ## COG: AF1959 COG1924 # Protein_GI_number: 11499541 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Archaeoglobus fulgidus # 1 248 1 251 251 176 43.0 3e-44 MNYVGIDIGSTASKVVVRGGAEKGFVLPTGWSSKETSLTIQKKLREDGIDVLSEETKVVA TGYGRVAVEFADYVITEITCHARGGRELAGNDCAVIDVGGQDTKVILVQNGMVSDFLMND KCSAGTGKFLEIMANRLGITLQELFDLAKTGEVLSISSLCTVFAESEVINYIGEGRKRED IAAGVVDSVAAKVAQLCRKKNLPPKVILTGGLSGSSYFTKILSEKVGQTVEPTEYGRYAG ALGAAFLAEEKSR >gi|224461044|gb|GG657760.1| GENE 172 170688 - 170948 203 86 aa, chain - ## HITS:1 COG:no KEGG:Slip_0274 NR:ns ## KEGG: Slip_0274 # Name: not_defined # Def: hypothetical protein # Organism: S.lipocalidus # Pathway: not_defined # 1 76 1 76 85 73 43.0 2e-12 MDKVQHYVLFPNHDNGMRLHRELKAEGVRAVIAPTPRSASKCCGISLLIKKDDIETVKRC IEEHGIEILDIVEIKRDIDPNRDKYC >gi|224461044|gb|GG657760.1| GENE 173 170974 - 172251 1564 425 aa, chain - ## HITS:1 COG:MK0258 KEGG:ns NR:ns ## COG: MK0258 COG1775 # Protein_GI_number: 20093698 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Methanopyrus kandleri AV19 # 3 422 2 420 421 412 49.0 1e-115 MADYHEMWKDLGMDLETHDQLCEVLPQAFGDVYLSQENRPEGMDYFNFVVAEIHGVRPAE LIEHQKKGGKVFGTFCVYVPDEIVFAADAIATGLCGGSQFWVPGGEKVLPTNTCPLIKAS VGARLDRTCPFFRIADMYVGETTCDGKKKAWEILSEDVPVHVMNLPQMKRGKDIAAWAEE IAEFKDKVEEFTGNTVTADKLAAGIQLINTKRKALQRLYDLRKNERLPVSGCDALLISQI AFYDDPARFAEMTNKLCDELDERVKNGVSVVKDGTKRIMLTGTPLAIPNWKLHNIVETSG GAVVCEEMCTGTRYFEHLVDESRTTVEEQIQALAERYMNINCACFTPNEGRIDDILRLAR EYKVDGIIDVNLKFCSLYDTEGYFVERAMKEAGIPVLGIETDYTDSDAQQLRTRVSAFIE MLNNA >gi|224461044|gb|GG657760.1| GENE 174 172416 - 173570 978 384 aa, chain - ## HITS:1 COG:CAC2354 KEGG:ns NR:ns ## COG: CAC2354 COG0520 # Protein_GI_number: 15895621 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 5 381 2 374 379 294 42.0 2e-79 MENKIYFDNGSTSFPKAPGVAQAVASLLENGAFNINRGSYEGAYEVADKVLDTREKLAAL FHAESSRQVVFTPGITYSLNYFIKGFLRSGDHVIVSSMEHNAVMRPLKQMEEQGVTYSAV YTDEEGNVLPGDVEREIKANTRAVIMLHASNVCGTIVPIQETGRICKKYGLYFAVDSAQT AGTIEVDMQQMNIDFLAFTGHKGLLGPQGIGGFLISDRLNENMVPYIAGGTGSQSDSLYM PGQLPDKYESGTMNLPGIIGLHAALSYIEKQGLSNIHRKKMELAGAFLEQVKQLPGVKII GRKDLKERVAVVSLDFDGQDNAVLAFRLEQEYGIMTRVGLHCAPMAHKSLHTYPQGTVRF AFSADNKYEEIERCTAALRELLSI >gi|224461044|gb|GG657760.1| GENE 175 173560 - 174399 627 279 aa, chain - ## HITS:1 COG:CAC3099 KEGG:ns NR:ns ## COG: CAC3099 COG0101 # Protein_GI_number: 15896350 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Clostridium acetobutylicum # 34 277 2 244 244 214 45.0 1e-55 MWIKDEVKMKKGTGQIQLGTEEIEKNPVPKISQRRIRLVIAYDGTDYCGWQIQPNGITIE EVLNGVLTKLTGEDIHVIGASRTDSGVHALGNVAVFDTASSIPPERMAYALNQRLPKDIV IVRSDEVPAGWHPRYRDVVIKTYEYHIYNAPVQNPLKRRTSTHISFPLNVEKMREGAKYL IGEHDFASFCNVRTSVKDTVRTVTELRIDSDGPEIIMRITGNGFLYNMVRIIAGTLIRVG RGFYEPEKVKEILEAKERTGAGVTVPPNGLVLVEIDYGE >gi|224461044|gb|GG657760.1| GENE 176 174507 - 175331 724 274 aa, chain - ## HITS:1 COG:CAC3100 KEGG:ns NR:ns ## COG: CAC3100 COG0619 # Protein_GI_number: 15896351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 1 249 1 250 267 275 57.0 5e-74 MIRDITIGQYYPAKSILHRLDPRVKLVSTLLYLISLFLFKSIPGYIVATVFLVTVINISR VPFSFIVKGLKPIIMLLLITVLFNLFLTRDGEVLFHAWIFTITEGGLRTAVYMAVRLIYL IIGSSLMTFTTTPNELTDGIESLLHPLNKIHVPVHEVAMMMSIALRFIPILLEETDKIMK AQIARGADLENGNIIQRAKNMIPILVPLFVSAFRRANDLAMAMEARCYRGGEGRTKMKPL QYQKRDYIAYVSVIIYVAAVFVIGRYVPLHVWIF >gi|224461044|gb|GG657760.1| GENE 177 175328 - 176236 427 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 1 290 102 391 398 169 36 2e-40 GSTAAGRHTAEGRIGGGVMSIRLEHLNYIYSPGTAYEKQALKDICLEIPNGEFVGIIGHT GSGKSTLIQHLNGLIKATSGALYYNEENIYAEGYDMRSLRSQVGLVFQYPEHQLFEVDVM TDVCFGPKNQGLLPEECRKRALEALRLTGLKEKYYNSSPFELSGGQKRRVAIAGVLAMRP KVLVLDEPTAGLDPKGRDDILDQIAYLHRQTDMTVILVSHSMEDIARYADRIIVMNKGTV MYNDKPKKVFAHYRELEKVGLAAPQVTYIMHDLQEKGFPVKTDVTTAAEAADEIMKVLEN RG >gi|224461044|gb|GG657760.1| GENE 178 176167 - 177036 602 289 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 34 286 146 397 398 236 49 1e-60 MEGLCLMDMIQTEKLVFEYEKRDEEGNVIGKSRAIDEVDIDVKEGQFIAVLGHNGSGKST FAKHMNAILVPTEGTMWVNGMDTKDPDKLWDVRQSAGMVFQNPDNQIIGTVVEEDVGFGP ENLGVPTEEIWKRVEESLKAVGMIEYRSHSPNKLSGGQKQRVAIAGVVAMEPKCIVLDEP TAMLDPAGRKEVLRTVQELRRKKHVTVILITHYMDEVVDADKIFVMDHGRVVMEGTPREI FSRVDELKRYRLDVPQATILADELKKRGVPLPDGILRKEELVEALCQLG >gi|224461044|gb|GG657760.1| GENE 179 177144 - 178082 965 312 aa, chain - ## HITS:1 COG:CC3033 KEGG:ns NR:ns ## COG: CC3033 COG0697 # Protein_GI_number: 16127263 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Caulobacter vibrioides # 14 301 17 305 310 224 46.0 2e-58 MERTLQKPAVRGLLALLCCALWGSAFPCVKTGYEWLHIETTGSQILFAGYRFFLAGVLTF IMGSVMERRILRMKKSSVPYVLRQGLMQTTLQYVFFYIGMANTTGTKGSVINASNAFISI LAAPLLIKGEKLTWKQGVGCAVGFLGVIIINLEPGAWGDGFSFGGEGMVLICTVFYGIST VIMKKISHLESAMTITAYQLLFGGFILTVIGFAAGGRIAGFDGKSAALLIYMAMLSAVAF SLWTILLKYNSVGKVAIFGFSIPVFGVFLSAVILGEQIISLKNFAALICVSIGILLVNGL AVQCGRKKEQVS >gi|224461044|gb|GG657760.1| GENE 180 178094 - 178612 677 172 aa, chain - ## HITS:1 COG:CAC2769 KEGG:ns NR:ns ## COG: CAC2769 COG0652 # Protein_GI_number: 15896024 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Clostridium acetobutylicum # 1 170 1 170 174 229 65.0 3e-60 MANPIVTFEMENGDVMKAELYPDIAPNTVNNFISLVGKGYYDGLIFHRVISGFMIQGGCP DGTGTGGPGYNIKGEFSQNGFSNDLKHGEGVLSMARAMHPDSAGSQFFIMHKNSPHLDGS YAAFGKIIEGMDVVNKIAAADTDYSDRPLEEQKMKKVTVDTDGVDYPEPEKA >gi|224461044|gb|GG657760.1| GENE 181 178758 - 179369 673 203 aa, chain - ## HITS:1 COG:no KEGG:Closa_2635 NR:ns ## KEGG: Closa_2635 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 201 1 196 198 182 49.0 5e-45 MKRELDYFTIEGAFGGNQEWFTNVVMNIGGCGAATACDSCIYFARRPDMRQLYPFDRDGL TVKDYKRFSQIMKPYIRPRAGGVKKPQWYVDGLSRYISDVNAREGCDIKLQMDILPGDRP YTEAAEKIRQQIDAGYPVPYLMLRHKNQKFKDFIWHWFLVVGYEEKEDGLEIVTATYGEA ARISLRELWDTGHEEKGGLILYK >gi|224461044|gb|GG657760.1| GENE 182 179630 - 180046 470 138 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570930|ref|ZP_03779953.1| ## NR: gi|225570930|ref|ZP_03779953.1| hypothetical protein CLOHYLEM_07034 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07034 [Clostridium hylemonae DSM 15053] # 1 138 1 138 138 138 100.0 1e-31 MATKTGTKKQETAAKTEPVNVKADAVKEKAETVKKAEPVKKAEAVKAEPEKKAPVRKTAA KKTTAKKPAVKKEMKVNTVVEYYGKQVEEKDMVAAVKKAWTKSGRKVGDIRTMELYIKPE EGAVYYVINGTDTGAVAF >gi|224461044|gb|GG657760.1| GENE 183 180162 - 180767 825 201 aa, chain - ## HITS:1 COG:no KEGG:Pjdr2_5585 NR:ns ## KEGG: Pjdr2_5585 # Name: not_defined # Def: hypothetical protein # Organism: Paenibacillus # Pathway: not_defined # 20 187 41 210 224 86 35.0 5e-16 MKKKFLLICMAAMLALSLTACGGNDKKEDKKADKKEESVKKEEKDIELTLPASFFDEEGM ADINEEAKAEGVKEVKVNDDGSVTYKMDKSTHEKLLKEMKKGIDESISELLEDKENYSSF TEITYNDDVTEFKIMVDPAAYGGLQSFGALVMYAAGNMYQGMNLVPEDEINTTVQFINKD TQEVIESGDSKSMADEYEGTE >gi|224461044|gb|GG657760.1| GENE 184 180875 - 181291 519 138 aa, chain - ## HITS:1 COG:TM0723 KEGG:ns NR:ns ## COG: TM0723 COG0432 # Protein_GI_number: 15643486 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 1 138 1 139 139 197 69.0 5e-51 MKSYSKKLHFHLPSRRGLVNITQDVQDAVGESGIKEGMVLVNAMNITASVFINDDESGLH QDYEKWLEGLAPEKPYSQYRHNGYEDNADAHLKRTVMGRETVVAVTEGRLDFGTWEQIFY YEFDGKRDKRVLVKIIGE >gi|224461044|gb|GG657760.1| GENE 185 181484 - 181996 571 170 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570933|ref|ZP_03779956.1| ## NR: gi|225570933|ref|ZP_03779956.1| hypothetical protein CLOHYLEM_07037 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07037 [Clostridium hylemonae DSM 15053] # 1 170 1 170 170 275 100.0 7e-73 MSEEMKSEELTETKAEETIENAEDKAADNTGSAEDSSKENDKKSTGKTAEEPEAETPKSK LDYEEAYHSIYKDLLEHLRSFSPTDEIAYRITEEHITEYLEGRREEKHQEYKERRDKRLL SALKLIAILVCIVLIVWFLKDSQAILVNILYIIGGLIALWIWKYPHNKDE >gi|224461044|gb|GG657760.1| GENE 186 182120 - 182971 1075 283 aa, chain - ## HITS:1 COG:no KEGG:Clole_1368 NR:ns ## KEGG: Clole_1368 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 6 279 2 287 289 220 45.0 4e-56 MTLLKDILLDTTLDCLKMLPFLFAAFLVIEALEYYSGEFTARLLAGVGKAGPVVGAAAGC VPQCGFSVLASNLYAGGIISVGTLLSVFIATSDEALLIIMGNPGRGKDVVFLLLTKVIIA VIAGYVTDIFLSRRIEVPKECGTLCSDCGCEEDGGILKPALHHTVKIFIYLFIFTGLLNL CIEVLGIDELSTLLLGNTVFQPVIAAVIGLIPNCAASVILTQLYLNGAISFASVIAGLCT GAGIGLVVLFKVNRQRKENMKILAVLFAVGVAAGVVLELAGVF >gi|224461044|gb|GG657760.1| GENE 187 183058 - 183885 660 275 aa, chain - ## HITS:1 COG:CAC1421 KEGG:ns NR:ns ## COG: CAC1421 COG1180 # Protein_GI_number: 15894700 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Clostridium acetobutylicum # 2 274 14 283 284 265 48.0 7e-71 MKKECRVCMHRCVLDEGQTGRCRARMNRGGEIICGNYGHITALALDPIEKKPLRRFFPGT KVLSVGSYGCNLNCPFCQNHDISMRGEDRRRNVFLTPEELAERAAELGEKGNIGIAFTYN EPMISYEYIRDTALLVRKAKMKSVVVTNGSVTEETLRRVLPYIDAMNIDLKGFTEEYYHM LGGDLETVKHFIQCAAQECHVELTTLIVPGKNDSAGEMRELARWAAGIDRKLPLHVTRFF PAFRMEDGCPTDIQTVYRLAGEAAKYLDHVYTGNC >gi|224461044|gb|GG657760.1| GENE 188 183891 - 185246 1045 451 aa, chain - ## HITS:1 COG:CAC1420_1 KEGG:ns NR:ns ## COG: CAC1420_1 COG3885 # Protein_GI_number: 15894699 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 260 1 267 299 206 38.0 8e-53 MSVEAAYMVPHPPLIVPAVGRGQERAVSATAEAYRMAAEEIALLRPDTIVVTSPHAVMYR DYFHISPGTGASGDFGQFRAAQEKIDVRYDAEFTARLESLAGRDGFPAGTCGERQKSLDH GTMVPLYFVNEQYKEYRLVRIGLSGLSLAGHYRLGGYIQKTAKRLGRKTVLLASGDLSHY LKEEGPYGYRKEGPEYDRMIMDIMGEGDFARLSDFSEEFLEKAGECGHRSFMIMAGALDG CAVEARRLSYEGPFGVGYGICSYHVTGRKAEEEEKESEGQDGLDAYVRLARQSLETYIRT GRQMKMPGGLPEEMTERRAGAFVSLKKGGALRGCIGTIDGVHSSLAEEIMENAVSAGVRD PRFPPVEKEELAELAYSVDVLGDTEEIQGPEELDVKRYGVIVSRGWRRGLLLPNLEGVDT VEEQIAIARQKAGIGEHEPVKLERFEVVRHR >gi|224461044|gb|GG657760.1| GENE 189 185306 - 186583 1717 425 aa, chain - ## HITS:1 COG:FN1147 KEGG:ns NR:ns ## COG: FN1147 COG3681 # Protein_GI_number: 19704482 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 22 424 3 411 411 339 45.0 7e-93 MNREDNVYSAYVQILKEELVPAMGCTEPIALAYAAARAREVLGEVPDRVLVEASGSIIKN VKSVIVPNTDHLKGIPAAAAAGIIAGKADKELEVISEVSDGEIQQMRAFLEKTEIKVVHV DNGITFDIIVTVYKGKDHAKVRIANYHTNIVLIEKNGEKLLEIPVEGEKEEGLTDRSVLN MESIWDFVQSLDIEDVRDVLDQQIAYNTAISDEGLKGDYGANIGSVLLDTYGDDIKTRAK AKAAAGSDARMNGCELPVVINSGSGNQGITCSVPVVEYARELASGEDKMYRALALSNLVA IHQKTGIGRLSAYCGAVSAGAAAGAGIAYLCSGGYEEVIHTVVNALAIVSGIVCDGAKAS CAAKIASSVDAGILGYYMYKNGQQFYGGDGIVTKGVEATIKNVGRLGKEGMRETNEEIIK IMVEE >gi|224461044|gb|GG657760.1| GENE 190 186601 - 187440 936 279 aa, chain - ## HITS:1 COG:CAC3396 KEGG:ns NR:ns ## COG: CAC3396 COG2816 # Protein_GI_number: 15896637 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Clostridium acetobutylicum # 87 258 89 250 271 147 40.0 3e-35 MIQDIEPHCFSNEYRPKAPDGASFLLCYSGRKVLLRKTGQEEIAFPTFEEMEPYTEGLYE EYTYLFSIDGQRFYLGEGIGFYEAGDFTLEDTEIFRTAVPRHMAFAGITGAQLYRWYGSH RFCGRCGSRTKPDGKERMLKCPSCGNMEYPKIMPAVIIGLTHGNRLLMSKYANREFKKYA LLAGFAEIGESIEDTVRREVMEEVGLKVKNITYYKSQPWSFSDTLLLGFYAELDGDEEIT LDKEELALAEWFEREDIPVKASDLSLTNEMIMRFKNAEM >gi|224461044|gb|GG657760.1| GENE 191 187575 - 188201 808 208 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3706 NR:ns ## KEGG: Cphy_3706 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 204 2 201 204 159 43.0 6e-38 MTDNVIIAIGRQCGSGGHEIGMRLAKKLDIPLYDHNLVAMAAKELDISEEAAREVDETAL SSFLASYITGPGDYVAYMNAEDYMRPLSERVYKAQSGIIRRLAGRSPCVIVGRCADYVLQ DCPNCVSVFICADKEDRIKRIAQLQELPERKAAEKIKKIDRERKYYYETNTGEDWGKASS YQLVLNVSRLGLNKSVDILASLFESLGQ >gi|224461044|gb|GG657760.1| GENE 192 188296 - 188805 545 169 aa, chain - ## HITS:1 COG:no KEGG:Closa_0702 NR:ns ## KEGG: Closa_0702 # Name: not_defined # Def: CarD family transcriptional regulator # Organism: C.saccharolyticum # Pathway: not_defined # 1 165 1 165 170 169 47.0 5e-41 MFDVGEYIVCGRYGVCRVKETGPVHITGAPRKRLYYTLVPVYDSNSRAYVPVDSEKIIMR PVISGEQANELVDHINDIDALWIQDEKKREAAFKEALYKCDCREWIKIIKTIYRRRQDRI AQGKKVTAGDERYLHMAQDRLYGELAVALGMKKEEVEAYIIGRAEAPEP >gi|224461044|gb|GG657760.1| GENE 193 189013 - 191172 1950 719 aa, chain - ## HITS:1 COG:CAC1031 KEGG:ns NR:ns ## COG: CAC1031 COG0370 # Protein_GI_number: 15894318 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Clostridium acetobutylicum # 28 719 7 681 683 317 30.0 4e-86 MGLTIRSTGKGAADTELIIRKPSPDAKVAALAGNPNVGKSTVFNNLTGMNQHTGNWPGKT VTNAQGFCSTDKYSYVLVDIPGTYSLMAHSAEEEIARNFICFGGADEIIVVCDATCLERN LNLVLQTIEICDEVIVCVNLMDEAKRKHIAIDIEKLEHILGVPVVGAVAREKKSLDGLLL RMDEMADAQMNSRQPVKVHYPEEIEQAAELVLPAVKEILERNGRKRPAAKWLALKLLEGD TSLLEELNKATGTDICKEPAVSGALNEARRLLESRGVDPNTLKDKIVSTVVKQAEDIGRA VVQSKEQGYRGLDKKLDRILTSRRTGYPVMIALLAAILWLTITGANYPSQLLSQGLFWVQ DKLMELFVHIGAPKWLTGMLIEGVYRVLAWVVSVMLPPMAIFFPLFTLLEDAGYLPRVAY NLDKPFKRCCACGKQALSMCMGFGCNAAGIVGCRIIDSPRERLIAMLTNNFVPCNGRFPT LIALITMFFIGTKSAAGSSVIAALMLTAAIVLGVVMTFVVSGILSRTLLKGVPSSFTLEL PPYRRPQIGKVIVRSIFDRTLFVLGRAVVVAAPAGLVIWFLANVDAGGVSLLAHLSDFLD PFARLLGLDGVILLAFILGFPANEIVVPIMIMAYMAQGSLLELDSLSEMHRLFVDNGWTW VTAVCTMLFSLMHWPCSTTLLTIRKETGGLKWTAAAFLIPTVTGMLLCFLVSRAALLLG >gi|224461044|gb|GG657760.1| GENE 194 191181 - 191420 234 79 aa, chain - ## HITS:1 COG:no KEGG:Closa_3332 NR:ns ## KEGG: Closa_3332 # Name: not_defined # Def: FeoA family protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 76 1 76 104 88 56.0 8e-17 MNRAVCLNDIEPGQSAVVKQLLSDGSIRRRLLDIGLVEGTLVECIGRSPGGDPSAYLIRG AVIAIRSEDSTRIMIREMR >gi|224461044|gb|GG657760.1| GENE 195 191531 - 191950 354 139 aa, chain + ## HITS:1 COG:CAC2616 KEGG:ns NR:ns ## COG: CAC2616 COG1321 # Protein_GI_number: 15895874 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Clostridium acetobutylicum # 2 122 3 123 157 79 36.0 1e-15 MEHNFYTQKGYELNCHDDLTASMEDYLEMICRMLLEKDVVRIQELSAQLHVKPSSASKMV GTLKEKGYLQFEKYGYLTATQKGREAGNYLLYRHEVLHRFLCLLNHTENELEQVEKIEHY IDKRTVENLARLLPLLPES >gi|224461044|gb|GG657760.1| GENE 196 192042 - 192209 214 55 aa, chain - ## HITS:1 COG:FN0052 KEGG:ns NR:ns ## COG: FN0052 COG1393 # Protein_GI_number: 19703404 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Fusobacterium nucleatum # 3 55 66 118 120 62 56.0 2e-10 MKYKELGLKDRLPEMSEKEQYEILATDGMLVKRPLLIGADFALPGFKEQEWQKVL >gi|224461044|gb|GG657760.1| GENE 197 192425 - 193351 701 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 2 308 3 305 308 274 45 4e-72 MIYDNVLEAVGDTPLIRLNRMTGPGDAEILVKFEAVNVGGSVKTRTALNMIETAEKKGLI HKDTVIVEPTSGNQGIGLALIGAVKGYKTVIIMPDSVSEERRKLVQNYGAEVRLIHDAGN IGDCIDECLRTALKMAEEDPDVYVPQQFENEANSAAHREQTGQEILRQAGKPIHGFCSGI GTGGTITGIGEALRAENPDMEIWAVEPENAAILSGGKVGTHLQMGIGDGVIPDILNQKIY DDIVIVTDEEALKTAKELAGKEGLMCGISSGTNVAAAVRMAKKLGRGKTVVTVLADTAER YFSTPLFQ >gi|224461044|gb|GG657760.1| GENE 198 193431 - 194015 482 194 aa, chain - ## HITS:1 COG:FN1752 KEGG:ns NR:ns ## COG: FN1752 COG0352 # Protein_GI_number: 19705073 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Fusobacterium nucleatum # 15 194 11 206 206 115 34.0 4e-26 MHDNMEMSRGGIIAVTNRHLCRRPYLEQVERICLRHPPALIVREKDLAEEAYERLICEVR DICDAYDVFCIPHTYMEAAERLRSCAVHLPLPLFRSCRDRALRFRWAGTSVHSVQEALEA EALGAAYMTAGHVFSTDCKRGVLPRGTGFLKGVCEAVNVPVYAIGGMQGTETCVREMSAF GASGICVMSECMRW >gi|224461044|gb|GG657760.1| GENE 199 194030 - 195247 1084 405 aa, chain - ## HITS:1 COG:FN1753 KEGG:ns NR:ns ## COG: FN1753 COG1060 # Protein_GI_number: 19705074 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Fusobacterium nucleatum # 34 405 3 374 376 473 59.0 1e-133 MDEQTCVNESILNDDIREWQKKNRIDHMSYLPGMEVLKSDVEAQVTAAMNSYDYTKYTAD DVRRALGHENRSPEDFAALLSPAALPLLEEVAQCARTETRKHFGNSVNMFTPVYIANYCE NFCIYCGFNCHNKIRRAILSAEEIEREMEAVARSGLREALILTGESRKHSDVEYIAGACM TARKYFKVVGLEVYPMNSDEYAYLHKCGADYVTVFQETYNSDKYESLHLSGHKRIFPYRL NAQERALRGGMRGVGFAALLGLDDFRKDAFATGMHAYLLQRKYPHAEIAFSCPRLRPIIN NDKIDPMDVHEPQLLQTVCAYRLFMPFASITISTRECARVRDHLVNIAATKISAGVSTAI GEHVGDTEAKGDGQFEISDMRSVEEVYNGLLGQKLQPVMQDYVYV >gi|224461044|gb|GG657760.1| GENE 200 195264 - 196043 964 259 aa, chain - ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 6 257 2 253 257 369 72.0 1e-102 MEHTTEDTFTLGGHTFTSRFILGSGKYSLDLIKAAVEHAGAQIITLALRRADEGGMANIL DYIPEHVTLLPNTSGARNAEEAVRIARLSRELGCGDFVKVEVIRDSKYLLPDNYETVKAT EILAREGFVVMPYMYPDLNAARDMARAGAACIMPLGSPIGSNKGICTRDFIQILIDEIDL PVIVDAGIGKPSQACEAMEMGAAAVMANTAIATAGDIPSMAGAFCKAVEAGRAAYLSGMG RVMDRGASASSPLTGFLQD >gi|224461044|gb|GG657760.1| GENE 201 196056 - 196688 832 210 aa, chain - ## HITS:1 COG:Cj1046c KEGG:ns NR:ns ## COG: Cj1046c COG0476 # Protein_GI_number: 15792373 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Campylobacter jejuni # 14 204 73 263 267 209 51.0 3e-54 MITEEEIQRALAERHSPEVRKKLAGARVAVAGLGGLGSNVAFALARIGVGHLHLIDFDKV DITNLNRQQYFIRHIGMYKTSALTEELMEINPYLELCPECVKVTEENLLSLFAQDDIVCE AFDDPEAKAVLVNGILEHYPDKFLVCASGMAGWGGNDTIRTRKVTERFYVCGDGVSEPSY GRGLMAPRAALCAAHQANLITQYIIEGQIE >gi|224461044|gb|GG657760.1| GENE 202 196692 - 196889 293 65 aa, chain - ## HITS:1 COG:CC1881 KEGG:ns NR:ns ## COG: CC1881 COG2104 # Protein_GI_number: 16126124 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Caulobacter vibrioides # 4 65 5 66 66 57 45.0 7e-09 MMKVNGREQEYVPGTSVELLLRQMEYPEQKVAVERNGEVVPRKQYAQTVLEDGDTIEVVS FVGGG >gi|224461044|gb|GG657760.1| GENE 203 197378 - 197974 603 198 aa, chain - ## HITS:1 COG:CAC0799 KEGG:ns NR:ns ## COG: CAC0799 COG0688 # Protein_GI_number: 15894086 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Clostridium acetobutylicum # 8 193 107 287 291 172 47.0 4e-43 MEGGPDTLVSPCDGKLSVYPVLHNRDGAGEFCIKNTKYTVESLLRSAHLAKRYEGGYACV FRLTVDDYHRYCYIDDGEKSENRTIPGIFHTVNPAANDVIPIYKENTREYSLLKSRHFKT VLMMEVGALMVGRITNYHGACKVKRGQEKGRFEFGGSTVILLFQKGAADLDKRLIDNTAK GFETIVKMGERIGAAPVC >gi|224461044|gb|GG657760.1| GENE 204 198273 - 198941 810 222 aa, chain - ## HITS:1 COG:CAC0798 KEGG:ns NR:ns ## COG: CAC0798 COG1183 # Protein_GI_number: 15894085 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Clostridium acetobutylicum # 2 205 3 202 205 134 40.0 1e-31 MIGIYNYTVVLTYVSLASSVFGMTQAIHGRFKTAILCLAISGLCDMFDGKIARTKKDRTD DEKAFGIQIDSLCDVVCFGAFPALICYLLGVRGPIGIAIIILYCINSVIRLAYFNVMEAK NALVTESGEKYYRGLPITSMAIVLPLVFMVQFFVPDWVFRICLHLALLIVGILFIGNFKL RKPKNGTLAVLVAVVGAAVLIMIIFTNYRISFHTGWPWFCRR >gi|224461044|gb|GG657760.1| GENE 205 198963 - 199967 1037 334 aa, chain - ## HITS:1 COG:lin2698 KEGG:ns NR:ns ## COG: lin2698 COG0392 # Protein_GI_number: 16801759 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Listeria innocua # 16 320 27 331 357 96 24.0 8e-20 MVFLLVVFALTLYSVFKGEDLRAVLRAIITVNPWYLLPGIAGVIIFIWGESIIIHYMFGT LKIRTKRWTCFLYSCVGFFFSAITPSASGGQPMQIYYMRKNKIPVPVSTLVLMIVTITYK SVLVAIGLFVAFFQRGFVHRYLEGILPIFYLGVALNVLCCIAMSILAFHPALAKWIMMKF LKILERIHILKHKPERTRRLAESMDQYNATALYLRTHGRVIVNVLIITFLQRFALFFVTW FVYKAFGLNGAHIYDVVMLQAVVSVSVDMLPLPGGMGISENLFLIIFKGIFTAGLLLPGM VLSRGIAYYVQLLLSAGMTLFAHLTIGQKAADKI >gi|224461044|gb|GG657760.1| GENE 206 199981 - 200709 484 242 aa, chain - ## HITS:1 COG:CAC1489 KEGG:ns NR:ns ## COG: CAC1489 COG0671 # Protein_GI_number: 15894768 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Clostridium acetobutylicum # 6 214 6 213 219 204 45.0 1e-52 MGTRCRIKNPILPKYAIFPLLACVTVNFMAYNGTEVLTRSWKHYDLTLPFDGMVPVIPWF VVIYLGCYLFWIANYILIARQGKEHCYRFVTADMMSRIVCAVIFLLLPTTNVRPELAGDG LWVMLLRMIYEIDRPTRLFPSFHCLVSWFCYIGIRGQKNVPKAYRMFSCLFAILICVSTQ VTKQHYIVDAVGGILVAEGTYWIAFHTELYRTPKNLFDRLYRLCFERRRRPVEKRGNCGE QE >gi|224461044|gb|GG657760.1| GENE 207 200900 - 201112 93 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570955|ref|ZP_03779978.1| ## NR: gi|225570955|ref|ZP_03779978.1| hypothetical protein CLOHYLEM_07059 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07059 [Clostridium hylemonae DSM 15053] # 1 70 1 70 70 125 100.0 1e-27 MEEITTLCRSPCGNEDLKLLAVNHALMNDCCSPCGCLLLIVDEDSRPPVTVTGKAEEQMI RYEDLQKMEG >gi|224461044|gb|GG657760.1| GENE 208 201755 - 204385 2551 876 aa, chain - ## HITS:1 COG:SMc00025 KEGG:ns NR:ns ## COG: SMc00025 COG0574 # Protein_GI_number: 15964685 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Sinorhizobium meliloti # 1 874 1 887 898 1013 57.0 0 MAKWVYMFTEGNATMRNLLGGKGSNLAEMTNLGLPVPQGFTITTEACTQYYEDGEKINDE IMAQIMESITKMEEITGKKFGDKENPLLVSVRSGARASMPGMMDTILNLGLNEEVVEVLA NKSGNPRWAWDCYRRFIQMYSDVVMEVGKKYFEELIDKMKEEKGVTQDVDLTAEDLQVLA EQFKDEYKEKIGQDFPTDPKEQLMGAIKAVFRSWDNPRANVYRRDNDIPYSWGTAVNVQM MAFGNMGDTSGTGVAFTRDPATGEKKLMGEFLMNAQGEDVVAGVRTPQKIDQLQEVMPEV YDQFVGICHKLEDHYRDMQDMEFTIEDKKLYMLQTRNGKRTAQAALKIACDLVDEGMITE EKAVAMIDPRNLDTLLHPQFDAAAIKAATPIGKALGASPGAACGKVVFTADDAKNWAARG EKVILVRLETSPEDIEGMKAAQGILTVRGGMTSHAAVVARGMGTCCVSGCGDIAMDEANK KFTLAGKEFHEGDALSLDGSTGNIYDGLIPTVDATIAGEFGRIMGWADKYRTMKVRTNAD TPGDARKARELGAEGIGLCRTEHMFFEGDRIDAFREMICSDTVEEREAALEKILPVQQGD FEGLFEALEGNPVTIRFLDPPLHEFVPTEEEDIKKLADAQGKTVDQIKTIIDSLHEFNPM MGHRGCRLAVTYPEIAKMQTKAVIRAAINVQKAHADWSVCPEIMIPLIGDIKEFKYVKKI VVETADAEIAAAGSDLKYEVGTMIEIPRACLTADDIAKEADFFCFGTNDLTQMTFGFSRD DAGKFLDAYYDAKIFENDPFAKLDQTGVGQLMEMAIAKGRPANDKLHVGICGEHGGDPSS VEFCNKLGLNYVSCSPFRVPIARLAAAQAAITAKNA >gi|224461044|gb|GG657760.1| GENE 209 204668 - 205837 1233 389 aa, chain + ## HITS:1 COG:BH3180 KEGG:ns NR:ns ## COG: BH3180 COG0686 # Protein_GI_number: 15615742 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Bacillus halodurans # 1 357 1 363 371 237 39.0 3e-62 MNVGILKDIKTGENRVIATPVEVAGLAADGHRVYVQKGAGAKAGFPDEKYAVEGAVLTDT AEEIYKSCDFIAKVKEFEPSEYGLLRENQIVFTCIHPAAHPEEVQALLKKKVIAFTAEDS HRFGSPNCEAAGKQGALMGLESMLTINGGKGKFVSGLGGALGMKVLILGGGTVGQAALSV LHALGAWVTVADISIGTLRRLQNEYRQSIDTVISSRENIKALLPSVDMVLNCVKWPKGST EYLITREMVRSMEPGSVIVDISNDEQGALETFHETTHENPRYVEEGVVHYCVSNIPGAIA NSTSVAYAASVLPHFRSILNNGVAEACARDGYLRRSLTTYKGYLTHEETSALQNRPWIRP EEILGIAGRELDFAPPATVSRSDNFIKLT >gi|224461044|gb|GG657760.1| GENE 210 205875 - 207275 1690 466 aa, chain + ## HITS:1 COG:PAB2161 KEGG:ns NR:ns ## COG: PAB2161 COG1757 # Protein_GI_number: 14520505 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Pyrococcus abyssi # 1 460 1 483 533 254 34.0 4e-67 METMGFISIIPAILAIVLSFATRNTVISLAIACITGTLLAGQGVFGFPTLLKESLGTTSF SWVMLLNTFIGILVAYFQKTGAIQGFSQKVHDRNLSRRGAQLMAWVLGIFIYFSDSFSPL FVGSVMRSITDKAKVSREKLAYIADSTSAPVSVLMPITGWAAYLMGLAVGVGCIVDEKDA SALFLKAIPFNFYPIFAVIFVGVIASGIIKDFGPMKKAEKRAVEEGKVIRDGATPLIGKE LTEMQAYPGLKPRVFLNFIFPVLMIISIAIGTYIAFSSAKTMEAFLMVVLFMTVSMMIQG IPFKEVMNTLTDGVKGALPAVMLLALAYSVNALSSQMGTANYIISLTEDLLTPHMLPAII FLVSAVMAFATGSSWGTFAICMPIALPLAFSFTDGTLTLLVIASFAAVAGGGVFGDHCSP LSDTTVLSSTGAAADHIDHVKTQLPYALVCGGLALIAYLIVGFVFV >gi|224461044|gb|GG657760.1| GENE 211 207352 - 208749 1917 465 aa, chain - ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 2 462 8 463 465 559 59.0 1e-159 MEKDNTWKTYSAEECVELEQINRSYKSCLDEGKTERECVKLAVKMLREHGYRDLKEFIDG QKTLGAGDKVYAVCMGKSIAAFHIGTEPLEKGMNILGAHIDSPRIDVKQNPLYENEELSY LDTHYYGGIKKYQWVTLPLALHGVVAKTDGSLVEIHIGDKEEDPVFAVTDLLVHLASKQM EKKANAVIEGEKLDLLFASRPLSSDGSLEKEEKDAVKANVLRILETTYGISEEDFVSAEL EIVPAGNARDCGIDRSMIMAYGQDDRVCAFTSLFALLDVDKVEKTACCILVDKEEIGSVG ATGMHSRFFENVVAEMTALTGGSSDLRVRRALQNSKMLSSDVSAAFDPMFAETFEKRSSA FFGKGLVFNKFTGSRGKSGSNDANAEYLAEIRRAMDRKHVAYQFAELGKVDAGGGGTIAY IMANYGMEVIDSGVAVLCMHAPWEITSKADVYEAYKGYKAFIEEM >gi|224461044|gb|GG657760.1| GENE 212 208908 - 210908 2120 666 aa, chain - ## HITS:1 COG:VC0783 KEGG:ns NR:ns ## COG: VC0783 COG2015 # Protein_GI_number: 15640802 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Vibrio cholerae # 43 666 30 657 660 578 46.0 1e-164 MKYKKIWSCILTTACVVSLAACAAAPGNEGNGGKDGGSSKKAKKATGMTKKNNEEVYDLL DFDDKQEMEFAKKNLLAAPSELEIKDENGKTVWSQKAYSFLEDREAPDTVNPSLWRSTQM NHLYGLFEVTDGIYQVRGYDMTNITFIQGETGWIVFDPLISTECSKAALELVNEELGERP VVGIVMSHPHVDHYGGIKGIISEEEVAERRIPVIAPEGFEEHAVSENVYAGNAMGRRAGY QYGTMLESSETGAMAIGIGMGQSTGTISYIPPNDIIKATGDRRTIDGVEMEFQMTPGTEA PAEMNTWFPQKKALWMAENCTGTLHNLYTLRGAQVRDGNAWAEYIMEAVTLYGEEADVVF QAHNWPHWGNGVIRNYMKDTAAMYKFINDQTLMYINEGYTSDEIANMITLPERLEKNWYT RQYYGTVAHNSKAVYQRYMGWYDANPVNLNRLAPTDRAKKYMEYLGDADAVLQKAEEDYE KGEYQWVAEITNMIVFAEPDNERARSLCADALEQLGYQAESGTWRNAYLSGAKELREGTE ADPDIKANVSPDLMKSMTPEMMLDYLGILLDANKAQDVNLRINLNFTDEDPYLLTVESGV VLYQKNAGALDADATLTLPRLGMFAILNDDKEQQKSVIRVEGDPEVLEKLTEHMVKFDFF FHIIEP >gi|224461044|gb|GG657760.1| GENE 213 211245 - 213800 2262 851 aa, chain + ## HITS:1 COG:VCA0011 KEGG:ns NR:ns ## COG: VCA0011 COG2909 # Protein_GI_number: 15600782 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Vibrio cholerae # 26 847 38 915 921 124 22.0 9e-28 MTGQETPVFLNDKFTPNLLPEVCAPRQALLKKYMHAAQFRFIYVGAQAGSGKTVSSLLWL NSCERRTIWIGLDSYDNAPSVFYKQLATGLYSLQPDNNAMRAVLVDPDFSASPVEHTIQL IAEMEPQEEAFALVLDDLHLITNAEIIKSLPAVIKRLPFSFVTLILSRHIIPDEFSTLVR DPQSQIITSRQLRFTEAEILRYFESLGRTLTAEEANFVYLATDGWAIGINAMAKSGQLQD EGEGYDFARYFKTQLWDNWEQDLRDFCLATAVVDEFDPELANVLSGREDAASVMEHLSRT NSFLSLLHGNTYRYHHLFQDFLRERLVQERVDVGGLYKTAALYYRDHSDYTRALKFSLDS GDFKNIDTYLYLFLFENHRGSVADYAEFLRPFFEKDFPRHAYRESPVLHVLSAWYYYLTS RHREFAEHMDAIMLHLPKIAKTGSTFVEFSMLAFSVDYRTTIHKKIKQFSMFGRFVKKYT PEGLATSIASFTHNLPYMHRSNFDYSDLALPPDVLDDIDHTFAPLLGAEWVYIKPGIRTC FLYEQNRMEEAARMLRTTLDCLSDKNKTEGRICVIVLQHSILWQTGNMKEADTVLTGLSN LVATEAQFFVPNLKAYTAKLALLDGNAAAAREWLDNYFVVDMEHVELFRAFQHFTTARAY ITLGEFAEARRYLLLLREYGENLNRPLDAAEAGVLLSVLDWIEGNKKEAARTLLAVLEDM QPYEFIRIIADEGAAVLPILKKAAALMEKEDYRGPLKRQFMSEVLLAAHAMSKCHKGIAA QLDSRRPVKLSKQQTLMLSLLSQGYKNAEISDITGLAIPTIKSHTSIAYHKLGVNNALDA VLKARELGFID >gi|224461044|gb|GG657760.1| GENE 214 213866 - 215065 1342 399 aa, chain - ## HITS:1 COG:VCA0886 KEGG:ns NR:ns ## COG: VCA0886 COG0156 # Protein_GI_number: 15601641 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Vibrio cholerae # 14 398 12 396 397 499 62.0 1e-141 MARKDDILSIYTKEVEGIKEAGLFKGEAPFVSPQGSRVTMEDGRELLCMCANNYLGLGNS PRLIEAAKKTYDDKGYGVASVRFICGTQDIHKKLEKKISDFLGTDDTILYSSCFDANGGL FETLLTADDAVISDELNHASIIDGVRLCKAKRFRYKNNDMEDLEAKLKEADEAGARVKLI ATDGVFSMDGIICNLKGVCDLADKYNALVMVDDSHAVGFVGKTGRGTPEHCGVQGRVDII TGTLGKALGGASGGYTSGRREIIDLLRQRSRPYLFSNSLAPAIAGASIELFDMLDESTEL RDHLEDVTAYYRKELVDNGFDIIPGTHPCVPVMLYDEKTAAEFAKRMMDKGVYVVAFSFP VVPKGKARIRTQVCASHTKEDIDFIVKCFKEVRSEMGLK >gi|224461044|gb|GG657760.1| GENE 215 215093 - 216157 1104 354 aa, chain - ## HITS:1 COG:STM3708 KEGG:ns NR:ns ## COG: STM3708 COG1063 # Protein_GI_number: 16766993 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 10 349 1 340 341 456 62.0 1e-128 MGDIKNDGMMWALVKEKPEEGLWMKRVPVPEVGPNDVKIKIHKTAICGTDVHIYQWNDWA QHTIPVGLTAGHEYVGEVVEVGGGVQGFHIGDLVSGEGHITCGKCRNCLEGHKENCKDAK GVGVNRNGAFAEYLVIPSSNVWPCNPAIPEEMYAIFDPFGNATHTALSYDVLGEDVLITG AGPIGIMAAAIVKFSGARHVVVTDLNQYRLDLAKKLGATRVVNLKEEKLTDVMKEIGMTE GFDVGLEMSGSQPGLSDMIHNMKHGGKIALLGLQRTDAVVDLETVIFNGLNLRGIYGRKV WDTWYKMSTMLQAGLDISDIITHHFDIKDYEKGFEAMISGQSGKVILDWAHVND >gi|224461044|gb|GG657760.1| GENE 216 216460 - 217725 906 421 aa, chain + ## HITS:1 COG:SPy0324 KEGG:ns NR:ns ## COG: SPy0324 COG3633 # Protein_GI_number: 15674487 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Streptococcus pyogenes M1 GAS # 1 395 1 395 404 413 61.0 1e-115 MKNIINKWNSISLVLRIICGLILGIILGLAVPQASGISILGQLFVGALKGVAPILVFFLV MSALCRMGKGQKTNMKFIVVLYLLGNLLSALVAVLASYVAPITLTLTEAAESDVAPPSGV IEVLTNLLMNVVANPVDSIVNANYIGILAWAVIFGIALKKASEGTKTALDNISEAVAQAV KWIISCAPFGIMGLIFATISTEGLGALLTYGRLIMVLVGSMAFVALVMNPLIVFLCTKTN PYPLVFKCLSRSFITAFFTRSSAANIPVNMELCEDMGLDEDTYSISIPLGATINMAGAAI TISTMALAAAHTMGISVDFPTAFILCVLSALSAAGASGVAGGSLLLIPMACSLFGISNDV AMQVVGVGFIVGVIQDSCETGLNSSTDVLYTACAELRDRRKHPENYTTDINIHAKKRKAE A >gi|224461044|gb|GG657760.1| GENE 217 217812 - 218522 511 236 aa, chain - ## HITS:1 COG:alr3268_2 KEGG:ns NR:ns ## COG: alr3268_2 COG1357 # Protein_GI_number: 17230760 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Nostoc sp. PCC 7120 # 22 105 51 134 158 63 36.0 3e-10 MLRKITEGELLNIIKDRRPGEQLDLHESLLEDMDLSGWDLHNINFNKSDIRNVNLDKANM AYLKADNAFFGGSSLRGTDLSGAYLHSADLRGCDMTGADIRGADMFASALEHTVLTDVKT DDKTKYFHLYCPEKGPFIGWKVCFGRRIVQLLVPEDARRISGTTNEVKCDKAKVLTIKSV DYRESYKEAHSYVDENFVYRAGEMVYAENFNPDRFLDSAGGIHIWLTREEAIAYLG >gi|224461044|gb|GG657760.1| GENE 218 218630 - 220051 1461 473 aa, chain - ## HITS:1 COG:CAC3195 KEGG:ns NR:ns ## COG: CAC3195 COG0423 # Protein_GI_number: 15896443 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 13 460 4 450 462 696 72.0 0 MKLIEGEDEDMVEKTMDKIVALAKSRGFVYPGSEIYGGLANTWDYGNLGVELKNNVKRAW WQKFVQESPYNVGVDCAILMNPQTWVASGHLGGFSDPLMDCKECHERFRADKMIEDFAHA NGLDIGDSIDGWSHEQMEAYIKEHEVPCPTCGKHNFTEIREFNLMFKTFQGVTEDAKSVV YLRPETAQGIFVNFKNVQRTSRKKIPFGICQVGKSFRNEITPGNFTFRTREFEQMELEFF CEPGTDLEWFNYWKKFCLNWLETLGLKDDEVRYRDHSPEELSHYSNATTDIEYLFPFGWG ELWGVADRTNYDLTQHQNVSKQDMSYFDDEKKEKYIPYVIEPSLGADRMVLAFLCSAYDE EELEGGDMRTVLHFHPALAPIKVGVLPLSKKLNEGAEKVYAQLSRKYNCEFDDRGNIGKR YRRQDEIGTPFCVTYDFESEEDGAVTVRDRDTMEQERVKIEELESYFAKKFEW >gi|224461044|gb|GG657760.1| GENE 219 220095 - 220838 707 247 aa, chain - ## HITS:1 COG:BH1369 KEGG:ns NR:ns ## COG: BH1369 COG1381 # Protein_GI_number: 15613932 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Bacillus halodurans # 8 245 7 243 254 112 28.0 9e-25 MNQITVTGMVLHASPIGEYDRRVVILTKERGKISAFARGARKPHSALVGVTSPFTFGEFT VYEGRTSYTLVSASVSNYFSELRVDVEGAYYGFYFLDFAGYYARENSDETLLLKLLYQTL RALTNPHLDNRLVRYIFELKAVAVNGEAPQVFECVRCADKERPAVFSVSKGGLVCSECQK ITGDGIQLLASTLYAMQYIISSPVEKLYTFAVKEEVLEQLGKIVRAYLDVYVEKRFKSLE ILETIVR >gi|224461044|gb|GG657760.1| GENE 220 220786 - 221001 119 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570969|ref|ZP_03779992.1| ## NR: gi|225570969|ref|ZP_03779992.1| hypothetical protein CLOHYLEM_07073 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07073 [Clostridium hylemonae DSM 15053] # 1 71 1 71 71 125 100.0 7e-28 MEDRYWDKFTRTGMVTDYLYYKGMDICRHVMDRCEADTAPTDGTCGVRQTGGRISESDYG DRHGASRISYR >gi|224461044|gb|GG657760.1| GENE 221 221057 - 221992 1189 311 aa, chain - ## HITS:1 COG:BH1367 KEGG:ns NR:ns ## COG: BH1367 COG1159 # Protein_GI_number: 15613930 # Func_class: R General function prediction only # Function: GTPase # Organism: Bacillus halodurans # 15 311 5 303 304 336 56.0 3e-92 MTKKHVPDEKGERMKKDFKSGFVTLIGRPNVGKSTLMNHLIGQKIAITSNKPQTTRNRIQ TVLTLQDGQIVFVDTPGIHKAKNKLGEYMVNIAERTLNEVDVVLWLVEPSTFIGAGERHI AEQLKKVNTPVILVINKVDMVKKEEILEAISAYKDIYDFAEIVPVSARNGDNTDELMSVV MKYLPYGPQFYDEDTVTDQPERQIVAELIREKALHSLNEEIPHGIAVAVDSMKRNRKVMH IDATIICERDSHKGIIIGKQGNMLKKIGSTARFEIEKMLGCQVNLKLWVKVKKDWRDSEF LMKNFGYREDE >gi|224461044|gb|GG657760.1| GENE 222 222051 - 224972 3374 973 aa, chain - ## HITS:1 COG:CAC3006 KEGG:ns NR:ns ## COG: CAC3006 COG1026 # Protein_GI_number: 15896258 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Clostridium acetobutylicum # 7 967 11 968 976 827 45.0 0 MSVKDLHAYDLIQEEKLEGIKSQGYLLRHKKSGARLLLVENDDDNKVFAVGFRTPPSDST GVPHIMEHSVLCGSKNFPAKDPFVELVKGSLNTFLNAMTYPDKTVYPVASCNDKDFQNLM HVYMDAVLYPNIYEHEEIFRQEGWSYKLEDADAKLEYNGVVYNEMKGAFSSPEGVLDRVV LNTLFPDTSYANESGGDPEVIPQLTYEQFLDFHRKYYHPSNSYIYLYGNMDMEEKLDWLD KEYLCNYDAERVDSEIKFQQPFEQMKEVTIPYSIASDEPQEDNTYLSYNKVIGTSLDREL YLAFQILDYALLSAPGAPLKKELTDAGIGKDIMGSYDNGIYQPIFSVIAKNANTEQKEAF IEVIENVLTGIVEKGLDTKALEAGINYHEFRYREADFGNYPKGLMYGLQMLDSWLYDDSR PFIHIEALETFEFLKKQVGTRYYEDLVQKYLLDNTHGAVVIVEPEKGRTARMEQELECKL KQYKNSLSREEVEELAERTRRLEAYQSEEDSEEDLNRIPVLKREDISRDIEPILNEEMTF AGIPAVFHEIETNGIGYVDILFDLSGVPAEELPYVGILQSVLGIIDTEHYDYGELFNEIN MHTGGIGTTLELYSDVTDVRSKAFKATLEIKAKALYGKLPVAFDMMGEILTASKLSDTKR IKEILAMAKSRLLMRFQSAGHLTAALRAMSYGSPSARFKDMTNGIEFYRKIADIEEHFEE SKDMLAEHLHHLAGQLFRPDNMMFSYTASREGLEGMESLAAGLKQRLFKETPDETPCVLH CEKKNEGFKTASKVQYVARTGNFIDNGASYTGALQILKVILSYEYLWQNIRVKGGAYGCM SNFNRIGEGYFVSYRDPNLKRTIEVYEGVVEYLKNFTVSERDMTKYIIGTMSNLDQPMTP AAKGDRSMSLYMNKVSADMIREERNQILDATQGDIRALYRVVEAVLKADQLCVIGSEEMI EENRELFETVTSF >gi|224461044|gb|GG657760.1| GENE 223 225144 - 225656 375 170 aa, chain - ## HITS:1 COG:no KEGG:Sgly_2287 NR:ns ## KEGG: Sgly_2287 # Name: not_defined # Def: hypothetical protein # Organism: S.glycolicus # Pathway: not_defined # 1 168 1 163 168 72 29.0 5e-12 MMYCPKCKEEYRDGYTVCAECGTRLERGCEPVVKSASVQDGKMEAMRPAKLISVENAVHA QMIAGVLEGNGIKCWIRDKESGDYMSVYMGYSVFGKDLYVDEADVKRAEELVDGIEAPVP SRETENGAEEEISVPPFYKNRRTAARILVAALAVAVAAGLILNIFQSFFG >gi|224461044|gb|GG657760.1| GENE 224 225696 - 227315 1855 539 aa, chain - ## HITS:1 COG:BH3449 KEGG:ns NR:ns ## COG: BH3449 COG1757 # Protein_GI_number: 15616011 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Bacillus halodurans # 39 538 1 511 516 325 39.0 1e-88 MNKRSKKIVWGTLVLLLMLACSSLTVFAAEDAAEYVPDMYASFWALIPPVVAIVLALITK EVYSSLFIGILMGGIFYSNFTFEKTITHVFQDGIIGVLSDSYNVGILVFLVILGVMVCLM NKAGGSAAFGRWAAEHIKSRVGAQLATIVLGVLIFIDDYFNCLTVGSVMRPVTDKHNISR AKLSYLIDATAAPVCIIAPISSWAAAVTGFVEGEDGLSIFIRAIPYNFYALLTIVMMLGL VFMKVDYGPMRLHEINAAKGDLYTTPDRPYANAEPESGEESRGKVIDLVFPIILLIICCV IGMIYTGGFFTGADFVTAFSQSDASVGLVLGSFFAFALTIIFYVVRRVMKFGECMSCIPD GFKAMVPAILILTLAWSLKAMTDSLGAAAYVEAIMKSSAKGFVTLLPAIIFLVGCFLAFA TGTSWGTFGILIPIVVAVFAGSNENMMIISISACMAGAVCGDHCSPISDTTIMASAGAQC NHVNHVTTQLPYAVTVAAVSFVTYIVAGFVQSAWIALPVGVVLMLLVLFVIRVGNVDKV >gi|224461044|gb|GG657760.1| GENE 225 227839 - 230718 2118 959 aa, chain + ## HITS:1 COG:all4496 KEGG:ns NR:ns ## COG: all4496 COG0642 # Protein_GI_number: 17231988 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Nostoc sp. PCC 7120 # 436 678 325 572 575 175 42.0 3e-43 MNNKNEQEEIIRLSDQILRTYFCNNDLDLLLSSLAEDVIWLGGGRHQKAEGREAVSAAFL EGAGGMIPCTMSEEEYEAMPLGDDYYLCEAQSHLLAADTSEMSMDVYQRCSFVYRRIENG WEAVHIHNSVPFEPIQDGELFPVEAAKESYRHLQETLAEANSEIRRQDNFLTQLYNTVPC GIIQFTTDRSHRIIHANKRAWEIYGYTRSEYWSSVKDPFIFVLEEERELYRTKVESLKND GDIVYYDREGRRKDGSQCFVSVAMARLLNADGEEVIQAVFNDITEAKRLELEKEREQLLE NQLLRAAVLTGYPLILNVNLTKNSFDKIISDNFICKNTSGSNFDHLVKEAYTTIYPSYRE VFRELFDRDHIMSEFQNGNREIFTEFRQLGDDGDYHWLSVHIIAVDNPYGQDTLSVMLFR VLDEQHAAQARQEQLLRDALEEAKAASNAKSDFLSRMSHDIRTPINAIVGMSTIGQLKID DRNQSVNCFKKIDDSSRYLLSLINDILDMSKIENGKMALTDEQFDLHELINSITAIVYSQ SVFKNIQFEVYCEDSLQQYYLGDALRMNQILMNLLSNSLKFTPAGGMITLHVKESKRRCG YSYLAFQVTDSGKGMSEDFMKRLYQPFEQEAADTARNLTGTGLGLSIVYNLVQLMNGTIN VESRLGEGTVFSIEIPFRLVEDEIWKEEQRKQQELLNGMRILIVDDDEGAGTQAAAILDS SGAECTWASSGRKAVEYVRESLAGSQAYELALIDWKMPEMDGLETTRQIRKLVGRDTMII MISAYDYTEIESEARAAGADYFISKPLFKTDLCNTLSRINVPKNNADTKTDINFQGCHIL LAEDNELNREIAQTLLEMEGACVDTAENGQAAVEAFAGKPEGYYEAVLMDIRMPVMDGLE ATAEIRLLEQERTVRVPVIALSANAFDEDRQMAYKAGIDEYLIKPVEAEQLYRLLQNIL >gi|224461044|gb|GG657760.1| GENE 226 230820 - 234356 3194 1178 aa, chain - ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 3 400 2 402 413 558 66.0 1e-158 MARKMKTMDGNQAAAHASYAYTEVAAIYPITPSSVMPEHVDEWATEGRKNIFGQTVQVTE MQSEAGAAGAVHGSLAAGAMTTTFTASQGLLLMIPNLYKVAGEQLPGVFNVSARAIASHA LSIFGDHSDVYACRQTGAAMLCESSVQEVMDLTPVAHCAALKGKIPFINFFDGFRTSHEI QKIETWDYEDLKELVDMDAIDEFRNHALNPNHPCQRGSAQNPDIFFQAREACNPFYDAMP AIVQDYMDKVNEKIGTDYKLFNYYGAADAERVIIAMGSACETIEETVDYMMAAGEKVGVV KVRLYRPFCAQALLDAIPETVKTISVLDRTKEPGAFGEPLYLDVVAALKGTKFDAVPVLS GRYGLGSKDTTPAQIVAVFNNTEKAKFTIGIVDDVTGLSLETGAPLVTTPEGTINCKFWG LGADGTVGANKNSIKIIGDNTDMYAQAYFDYDSKKSGGVTMSHLRFGKKAIKSTYLIRQA NFVACHNPSYVDKYNMVQELVDGGTFLLNCPWDMEGLEKHLPGQVKAYIADHNIKFYTID GIKIGKEIGLGGRINTVLQSAFFKLASIIPEEEAIDLMKKAAKATYGRKGDKIVQMNYDA IDAGAKQVVEVSVPDSWKSAEDEGLFTPEVKGGREDVVDFVKNIQSKVNSQEGNSLPVSA FSEYVDGSTPSGSSAYEKRGIAVDIPVWKEENCIQCNRCAYVCPHAVIRPVALTEDELAK APEGTKAIDMVGMPGMKFAITVSGYDCTGCGSCANVCPGKKGEKALVMENMEANVTVSQE RFDFGKEIPVKPEVVAKFKPETVKGSQFKQPLLEFSGACAGCGETPYAKLITQLFGDRMY IANATGCSSIWGNSSPSTPYTVNEKGQGPAWSNSLFEDNAEFGYGMLLAQKAIRKRLKEN VETVLASDEASAEVKAACQEYLDTFNSGATNGDAADKLVAALEGCDCGTCSDIVKNKDFL AKKSQWVFGGDGWAYDIGFGGVDHVLASGEDINVMVFDTEVYSNTGGQSSKATKTGATAQ FAAGGKETKKKDLAGIAMSYGYVYVAQIAMGADYNQTVKAIAEAEAYPGPSLIIAYAPCI NHGIKMGMSKVQTEEALAVECGYWNNFRFNPAAEGAKFTLDSKEPTGDYQAFLDGEVRYN ALKRANPEKAEKLFAKNEAEAKERYDYLKKLVTLYGAE >gi|224461044|gb|GG657760.1| GENE 227 234651 - 236039 1406 462 aa, chain + ## HITS:1 COG:Cj0601c KEGG:ns NR:ns ## COG: Cj0601c COG0733 # Protein_GI_number: 15791961 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Campylobacter jejuni # 18 428 6 414 447 208 35.0 2e-53 MSSNETGTGNSTKDQAQWGSRFGYIMVAAGAAIGLGNIWRFPYLAYGGGGGVFIVVYIIM ALLMGYPLIKAESAIGRYARANVAASFGAVKKKYRFIGWIAMLCTTLIDMYYVIVGGWVL KYAVAYITGADFGADTQVYFNGFTSATAEPLIYTAIIMIVVAVLLFFGITNLVEKITKFI MPALFILLVICGIWAVFSTPNAAEGLKYYIVPDFSKMSVKVFADAATQVLFSIGIGWGIF VTLGASLPKSNNIKKDSIWIAVCDTVVALTAGFVIIPSAFGAGVDVSSGPSLIFVVMTQI FSKLPGGRFIGIFFFIALLFAALSTLFTIIEIPNKWLEETAHISHRKSTTITSLIIFAGG VIVSLGFGILSGVELPFLDLNGVSYYNIYNWLDTFTAYILLPLGCLLTCFYVAKVWGFKE FEKELTVNGRDGGFSQFQKLLYAVIVPVLMLVVILNCFGFIK >gi|224461044|gb|GG657760.1| GENE 228 236764 - 238512 1570 582 aa, chain - ## HITS:1 COG:CAC3245 KEGG:ns NR:ns ## COG: CAC3245 COG1404 # Protein_GI_number: 15896490 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Clostridium acetobutylicum # 65 580 25 518 1118 339 37.0 9e-93 MTSQKADNLLNLALDATEEEREKSLELDVGYNPVDRQWDLIIKYSGDLGPVRELADEVVE LQNEYAVITIRESLIGALSGLVQVEYIEKPKRLFFQVANGRRVSCIDEVQGARFSLSGQG TLVAVIDSGIDYANPDFRNDDGTTRIKALWDQSSVPGDGGQPPAGYAIGVEYSTERINEA LSAGTEVGMRSIVPSRDTSGHGTAVAGIAAGNGRGSLGRQYRGVAVESELLVVKLASPRR DGFPRTTELMQGIDYVIRKAVEYEMPVAVNISFGNTYGAHDGTSLLERFIDDISNLWKSC ISIGAGNEAASAGHTSGILTEGQETVIELAVQDNQPTLNVQIWKAYTDVVDISLITPSGI RVGPIQEILGPQRFTAGQTEILLYYGEPSPYSASQEIFIDMLPRESYISAGIWRIVLYPR RVVTGFYEMWLPSENVLNRGTGFTFPTDDATLTIPSTAGRAIAVGAYNALDFTYAGFSGR GFSGDRRFIKPDLAAPGVNVTTVTVGGGYAAFTGTSFAAPFVSGSTALLMEWGIVRGNDP YLYGEKVKAYLRRGARPLPGFTEYPNPQVGYGALCVRDSLPV >gi|224461044|gb|GG657760.1| GENE 229 238537 - 239148 628 203 aa, chain - ## HITS:1 COG:CAC2575 KEGG:ns NR:ns ## COG: CAC2575 COG1592 # Protein_GI_number: 15895835 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 8 188 7 188 195 151 45.0 6e-37 MAIDFEKSRTKENLMRAFAGESQARNRYTIAAETARHQGMYSISQIFLFTADQERAHAER YYSLLKSLSGETVIISGGYPIDHSDSLADLLRSAQHNEMEEYEDVYQEFGDVAKEEGFLE AASAFYQIADVEAVHGKRFGKLAEMLENNTYYEREGEGAWMCLNCGHIHRGKRVPEVCPT CRHEKGYFIPVELAPYLECEFMK >gi|224461044|gb|GG657760.1| GENE 230 239211 - 240227 1161 338 aa, chain - ## HITS:1 COG:CAC1488 KEGG:ns NR:ns ## COG: CAC1488 COG0463 # Protein_GI_number: 15894767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 1 338 1 338 338 384 55.0 1e-106 MKYISFAIPCYNSEAYMEHAVESILPGGEAVEIIIVNDGSSDRTSEIAHEYAEKYPDIVK VVDKENGGHGDAVNSGLSNAQGKYFKVVDSDDWVDEEALHKILKLLRDLEEDDEEVDMLV SNYVYEKVGVTHKRCVHYRNVLPKDEIFRWDDIGHFRLDQYILMHSVIYRTAMLQLSQMR LPKHTFYVDNIYVYYPLPHVRKIYYLDVDFYRYFIGREDQSVNEKNMIARVDQQIFVTKS MIEMYQLRSVTSRKLRQYMINYLAIMMTVSSILLIRSKKEENLEKKKELWKYLKKKDVKT YMKIRYGILGQTINLPGKSGRKISSLAYSVARRIIGFN >gi|224461044|gb|GG657760.1| GENE 231 240376 - 241599 1201 407 aa, chain + ## HITS:1 COG:XF0274 KEGG:ns NR:ns ## COG: XF0274 COG0205 # Protein_GI_number: 15836879 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Xylella fastidiosa 9a5c # 2 401 13 409 427 226 38.0 6e-59 MKKNIIVGQSGGPTAVINGSLYGVVSEGVKQTERVGQVFGMINGIEGFLHGRCMDIGALD ATNELELVRTTPGAYLGSCRYKLPEDLKDPVYPELFKKFEEKNIGYFFYIGGNDSMDTVS KLSRYASGIGSDIRFIGVPKTIDNDLVETDHTPGYGSAAKYVATTVREIATDATVYDNKQ SVTIVEIMGRHAGWLTAASILARKFDGDNPVLIYLPEVAFDQDAFIEKVKESLKTTPNLV VCISEGINDGKGTFICEYASDVGTDNFGHKMLTGSGKYLENLVKERIGVKVRSVELNVCQ RCSCAHLSRVDLDEAGNAGIYAVQVALDGETGKMITFIRNKSVPYELSYGTADVNMICNK EKPVPDEWIISEGSDISSEFIDYVRPLTQGFVELPTKNGIPLFAYRR >gi|224461044|gb|GG657760.1| GENE 232 241671 - 242906 1010 411 aa, chain - ## HITS:1 COG:TM0395 KEGG:ns NR:ns ## COG: TM0395 COG0446 # Protein_GI_number: 15643161 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Thermotoga maritima # 1 395 1 406 425 231 34.0 3e-60 MKYVIIGAGTAGLTAAKTIRKEDSSADIYVISADTYVHSRCMLHKYIAGERSEEELDFTE ENFWDEFNINWVKGVRVSTVCPEEKKIELSTGEKMGYDRLLLANGSDSFIPPVGELRKAS NVFGLRNLSDAQAIVKEAECAEHVLVIGSGLVGLDAAYGLLERGRKITIVEMAPQILPVQ LDAHAAHAYQELFEQAGVRFILGRKASEAVCGSDGKIHKVTLDNGEEIPCDLIIVAAGVR PSAAYLEGSGIACDRGVTVDSHMQTNEPGIYAAGDITGLSGIWPNATDQGRTAGRNMCGI HAVYEDTYALKNTINFFGLVTLCVGRIREEEGDDIRIKEDRSQYKRAILREGKVEGILLQ GDISNAGTWQYLIKNKIDVSGIKKDIFHINFADFYHVGENGKYEWAAAGQS >gi|224461044|gb|GG657760.1| GENE 233 242903 - 243355 461 150 aa, chain - ## HITS:1 COG:TM0396 KEGG:ns NR:ns ## COG: TM0396 COG1142 # Protein_GI_number: 15643162 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Thermotoga maritima # 1 150 5 152 152 99 37.0 3e-21 MKRIMIDYEKCDGCKNCSAACMQAHRKSEGTIYDLDLTDPENESRNFILKDEKGMYKPLF CRHCAEPECVKSCMSGALKKDPESGHVFYDENRCGSCFMCVMNCPFGVLKPDRVTKSRVI KCDFCVNAGGEPSCVASCPKKAIYVEEVQE >gi|224461044|gb|GG657760.1| GENE 234 243371 - 245254 2103 627 aa, chain - ## HITS:1 COG:CAC0116 KEGG:ns NR:ns ## COG: CAC0116 COG1151 # Protein_GI_number: 15893412 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Clostridium acetobutylicum # 1 627 1 628 629 864 64.0 0 MNQCFGCNTCKSADKPLEGYIAGLPMETSHHRVENQSTKCAFGLQGVCCRLCANGPCRIS PEAPRGICGADADTIVTRNLLRAVASGSGCYIHIVENTALNVKNVAKTKGEIKGINTLDR LAALFSIEEADVHKRAEAVADAVLRDLYLPEYEKMELTEKMAYAPRYDKWKELGILPGGA KSEVFHGVVKCSTNLNSDPVNMLLDCLKLGISTGIYGLVLTNLLNDIVLGEPEIRFAPVG LRVIDPDYINIMITGHQHSMFTFLQDRLTDADIVEKAKKAGAKGFKLVGCTCVGQDLQLR GAHYTEIFDGHAGNNYTSEAILATGGIDAVISEFNCTLPGIEPICDELKIKQICIDNVAK KANAELKEFDFENRPAVTEEIIDEVVEAYAARRGTVPMNLMREHGYENTLTGVSEVSLKK FLGGSWKPLIDLIVSGDIKGVAGVVGCSNLTAGGHDVLTVDLVKELIAKDIIVLTAGCSS GGIENCGLMTPEAAQYAGPKLKAVCEKLGIPPVLNFGPCLAIGRLEIVATELAEELGVDL PQLPLVLSAAQWLEEQALADGCYGLALGLPLHLGLPPFVTGSKVAVQVLTEDMKQLTGGQ VIINGDAKESADILEQIVLEKRQGLNI >gi|224461044|gb|GG657760.1| GENE 235 245342 - 245731 442 129 aa, chain - ## HITS:1 COG:BMEII0707 KEGG:ns NR:ns ## COG: BMEII0707 COG1959 # Protein_GI_number: 17989052 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Brucella melitensis # 1 111 1 113 153 66 33.0 1e-11 MLLTRENDYAIRMLRAMRDGQKHTMKDICQEEEIPEAFAYKIVRKLQKAGIVEVERGAAG GCRMGRSLTELTLYDVVAAVDEEPVIMPCLRKSCSRNTGGNACKVHMELAQIQRVLMREL KARTLSEVF >gi|224461044|gb|GG657760.1| GENE 236 245883 - 247067 1520 394 aa, chain - ## HITS:1 COG:SA1524 KEGG:ns NR:ns ## COG: SA1524 COG0281 # Protein_GI_number: 15927279 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Staphylococcus aureus N315 # 1 391 1 392 409 453 58.0 1e-127 MDYAKESLKLHYEWKGKIEMTARAAVDNKEALSLAYTPGVAQPCLEIKEDISKSYELTRR WNTVAVVTDGTAVLGLGDIGPEAGMPVMEGKCVLFKAFGDVDAIPLCIRSKDVDEIVNTV ALMAGSFGGVNLEDISAPRCFEIEKKLKEKCDIPIFHDDQHGTAVITLAGLINALKLVGK KIEDIKIVTSGAGAAGIAIIRLLISMGVKNVIMTDRTGAIYRGRDGLNPIKQEMAEITNQ NCEKGTLEEVIKGADVFIGVSAPGTMTREMVQTMAKDAVVFACANPTPEIFPDDAKAGGA AVVSTGRSDFPNQINNVLAFPGIFRGALDVRASDINDEMKVAAAYALADLVSEEELTADY ILPAAFDTRVKDAVAKAVADAAVKSKVARIQPSV >gi|224461044|gb|GG657760.1| GENE 237 247501 - 248454 902 317 aa, chain - ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 14 309 35 330 330 212 44.0 7e-55 MKKRKLDLSKYGILFAWIALIIIFAVCEPTFLKTSNIFNILRQVSIVGVCSVGMTFVILT GGMDLSVGSVIGVAAVAGALMLSKGIPIPAVIIAILLVGAAAGAFNAFFINEVGIAPIIM TLGTMTALRGAAFLLCGGFPVYGITKSFLLIGQGYIGVVPIPVLIMIATFIAGYIFLNRL PFGRSVYGIGGNIEAARLSGINVKRVLYKVYILAGALYALAGLMLMARVNSGQAASGEGY EMDVITGCVLGGISISGGEGKITGVVTGVLLMGTLSNGMVLMDVSEYWQKVVKGLVLILA VTLDKTVQKGKTRKAEL >gi|224461044|gb|GG657760.1| GENE 238 248451 - 249962 1347 503 aa, chain - ## HITS:1 COG:AGc5112 KEGG:ns NR:ns ## COG: AGc5112 COG1129 # Protein_GI_number: 15890066 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 495 25 518 521 474 50.0 1e-133 MSEFILELKNITKVFPGVRALDKVTLSFKPGEVHAIAGENGAGKSTFIKIITGALKPTEG TVIYDGAEVKNNSPEISMKLGIAAIYQEFNLFPALSVAENVYYGRYPLKHHMVDYRKLEE DTQAVLDQLGVSVRPQTLVKDLSVGYQQIVEIAKAVSCNAKVLIMDEPSAPLTENEVAHL FQIIKKLKEQKITIIYISHRMEEIFEICDRVSVFRDGQYIKTLDVAETTTDELIKIMVNR DLGQQYPSKEYQRSNKVLEIKNLNTELLKDINIEAYAGEILGLAGLVGAGRTEVVRALFG ADKRRSGQFLIDGREVKVKKPMDAIRAGIGLIPEDRKRQGLLLKESIRHNISFANFKGIL KNGMIHEKTDRSVAQKYVDALEIKTPSVDQLAGNLSGGNQQKVVLAKWMFTDSKVLIFDE PTRGIDVGAKQEIYKLMLELVSQGKVVIMISSDMPELIGMADRIIVLHEGRISGSMEKKE FSQEYIMSLASGIGQEPSVEELT >gi|224461044|gb|GG657760.1| GENE 239 249999 - 251003 1091 334 aa, chain - ## HITS:1 COG:BS_rbsB KEGG:ns NR:ns ## COG: BS_rbsB COG1879 # Protein_GI_number: 16080649 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 10 316 4 295 305 97 29.0 3e-20 MKSKVFKRLSVVLVMVIALVSVSACTAKEPGSSDSKKEETTKKDKKSGKTKVGFIVQDLT INYFLSVVKGVEDFQDKYDMEVQVIDGHSDAPTQVDAVENLITQEVDCIVICPVDTVAPE AAVKEAQAAGIPVITWSEKIEGADAWIAVNNYDYGFENGKIAGQWILDNLDKQEDAKVMY VYVKENEQLIERGEGMMDGLASLAPDAETVAVQSGNTTESGMEAVETTLAKHPDLNVIVC SNDSVALGAYEAMVSAGKSDAKVCITGQDADEKNLEYISQDTILKGTVDIGAYNQGELLC QSVEKVLKEGKVADPIYVSFTPVTMDNVKDVMGR >gi|224461044|gb|GG657760.1| GENE 240 251017 - 251814 716 265 aa, chain - ## HITS:1 COG:lin2527 KEGG:ns NR:ns ## COG: lin2527 COG0627 # Protein_GI_number: 16801589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Listeria innocua # 1 254 1 247 252 165 37.0 8e-41 MAYFTGNIYSAKLLQDTQLHVILPQDGRRYIWDTDPKTLVLLHGLSDNASTWARRTSIER YAERYNLAVVIPEVQRSWYFDMAGGVQAFSYITEELPLILERLFHLSTSREDMLIAGLSM GGYGALKCALKAPETYGYCGAFSGAYDMNEIIRLSRQDDAPGLLKGIDREIFPITGRREY VPEEYLIPHILEEGPQEGCEFPKVYMVCGTEDFLYPQTEKLKKICQAKLKEFCYEEWPGI HEWDVWDKAIERMLKLYLGEGRKDN >gi|224461044|gb|GG657760.1| GENE 241 252070 - 253188 789 372 aa, chain + ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 6 366 3 375 385 132 28.0 1e-30 MSNNIDLKRNNQNKVYQYIYMNGGPVSKYDLIEQLDLSLPTVNLILKYLSENHYIYDCGT FGSQGGRPPKAFTYNPHLYYSIGLDITRHHVHMVMIDLSGNIVEKTRVKIDFIPEESYYM SLHDKISEMTARSGIDREKILSVGIALPVMVNVEQQTVLHGSLTEFNNVTPETFSRYLGF PCLICNDANAGGLAESWNIKDIRNSFYLSLNNTVGGAILQNNQLYFGETYESGEIGHVTL INDGRLCYCGKKGCVDAYISALILSNSADGSLDKFFEYVKEKSPYHLNIWNEYLEYLAIT VNNLKMLFDCSIIVGGYVGPYLEDFEDIIREKLIERNTYHEEAEYFRICRFKRYATAVGA ALLNVENFLKTV >gi|224461044|gb|GG657760.1| GENE 242 253346 - 255115 1290 589 aa, chain - ## HITS:1 COG:no KEGG:Bcell_3566 NR:ns ## KEGG: Bcell_3566 # Name: not_defined # Def: hypothetical protein # Organism: B.cellulosilyticus # Pathway: not_defined # 238 529 1454 1728 1773 92 25.0 6e-17 MIIIMLTVMVIGYSQVSKSLAVDTDKEPKSVLGTEDKDGTEGTIEPEEPDGPKEPDGPEP PERPDRPVEKYEFKCPAPDGKNGYYVTAPKIELIHVSEYGITKYRFTDSEGGTAEGELKE SGDRVCIGPDQFKDGGNSIYVWMEDEEGVQAEDSEYSKELYIDTAPPDIQLRAPRGLDAW YQKQVMLNVKGDDGDKGSQVEQISVYAGKQLLGTTSNSQAAFQISQTSVKGNGVSVTVAV ADRAGNKKEVTRKLYIDGTPPETAIQGIDNYMITSRPAEVHFQAEDDNVLSSASAKIVRE SPEGELEELTGNKWESDGRVSDMRRQLSEDGIYKMELTASDKAGFSRSQTAQIIIDKKNP VIRYVDELDNRVMREFQWEHPMEEAIKDFTSYVYEIRLDGKIYTPGKKVKTEGVHTLRIK AVDAAGNEAAAQARFLIDRTPPEILFEDVKEGETYEEECTFKVTVKDGNDTIEGIWLDGE KQAVNPRSKVYQYTVQEYGEHIVLVRACDRAGNRAETDVGFKVVKKETILDKIINPVRQR LVPEQRSTGEAAGKTDHGSVKKRTVFLLSATAAGSAAGIAVYKKRRRKK >gi|224461044|gb|GG657760.1| GENE 243 255130 - 256617 1152 495 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570996|ref|ZP_03780019.1| ## NR: gi|225570996|ref|ZP_03780019.1| hypothetical protein CLOHYLEM_07100 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07100 [Clostridium hylemonae DSM 15053] # 1 495 8 502 502 878 100.0 0 MASEGFDVLRLIEHNRSCYVSSEFVQGSVLIQWLKYHPNVPKKQLFSWMYEIMRQLALFH RLRGRPCYQYVNPYSVIVSSEEKLYLLDAGAKSSEILIRKMQRKAVRENFLPPKEHIYRK ASEALDIYGLGRTWQYILAVTEPDPPLTKREEQKLRKIISRCLNRQSKHAYQKVEEIQKH FPAERMKKTQFQRRSKVLAAAVILILAAAVIKAKVYSGGLAGAGRQNAGVSDASPRGKEE KEETDDSDLLKFDMGMVCLLELEEYAKAAGYLEEISRYGADCYAAIARSLEKDTAAAESR KLEEALIRAEKNIPAGREEVCLKGLIKGYTLLDTEEAGEEIVRLGEIYLRLGGEKGGAKE ADKEIMEAVALSYEGMDKKREAASMYEKVLEHEDGNEKREELYMKMTLMWEGTGDREKAW ECCRKGIDELQESAKLRLLYIRLQCMDTSVGREVCEETIREYIKSMPKLTGLEEFKKLQR EYDIRVEGEEVWVGR >gi|224461044|gb|GG657760.1| GENE 244 257181 - 257558 386 125 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571003|ref|ZP_03780020.1| ## NR: gi|225571003|ref|ZP_03780020.1| hypothetical protein CLOHYLEM_07101 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07101 [Clostridium hylemonae DSM 15053] # 1 122 32 153 153 225 99.0 9e-58 MKELFIDGTKIEANANRYTFVWRGTINYHLAGLLDTIDSLYQKYNVLIDENEYGTKYDIP HAHMFVIEGMDKVRDVIEKNRKRKLTKHKKLSNNTNIEIDNCSPLESLKLQKNLAQIAEK EQLAS >gi|224461044|gb|GG657760.1| GENE 245 257620 - 257784 187 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571004|ref|ZP_03780021.1| ## NR: gi|225571004|ref|ZP_03780021.1| hypothetical protein CLOHYLEM_07102 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07102 [Clostridium hylemonae DSM 15053] # 1 54 64 117 117 113 100.0 5e-24 MMYAVVTYANMRGVRAVDRIVELCERDLAFIWLTKGQRPKRDAFYEFKNKKTDG >gi|224461044|gb|GG657760.1| GENE 246 258137 - 260794 1444 885 aa, chain - ## HITS:1 COG:lin0354_1 KEGG:ns NR:ns ## COG: lin0354_1 COG4886 # Protein_GI_number: 16799431 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 179 340 128 287 292 92 38.0 3e-18 MKRKKRLAAFLAITLTLLSSNFTVLAEETADEIMVSGTVTDTNGYDVDGAVVTLAGGGQS FDTVLTNGSYSVYVPEGTYEVTVAKPGYTIEVKDTTPIEVIDSDVFRDISVSVTPQPNKS AAKTDVPAPPADEIPFDKVHFPDDAFRTYLKDTLKIDKDGNGALSETEIAAVDRIWIQDN PNLKSLEGLKYFTALEILTCGGAGLTELNIKDNKILKGVYLYNNLGITSLDTSSNTELDA ISCYNTGIESLDISQNKKLTALNCSSTNLKTLDVSANTILKGLDCHETAIESLDVSKNTA LIYLRCYNTEIKSLDVSNCTVLEELKCKDTPLAYLKIGTNALSKLKTLEKPEPSSIKLKE KAKTFKITDKFTGIDPAKITVKNGAKYDSTTGIVSEYNDEDPIEYSYDCGIYSNNDDSVT LDVKLKVFQKEESSIKITANDLDKTYDGTAVSSAPAVTKTGSTGAVTYIWEKQQKGGVSW EKISGTPTDAGYYRVTAHVAADDDYKAADSSPKEFMIWQADNNWTSGLAIGDWVYGTPAN TPSATPRFGTVSYTYSNSRTETFKEDVPTAAGTWYVKAAVAGTDNYTGLEKIIDFKITKA NAPAITLPDNLSGIQGDLLSTVKLPSGWAWEDDSQTLAIGNNGYKARLTVDDSNYDYMGV TDYDASGHYVEKVLSVTVSLEQNNWTVFPSILDWTYGDTASTPAGHAAYGTATFTYSDSK DGTFSKEVPTAAGIWYMKVSVAAEHGYTGLDTIVKFTIMPKNMETDNQIKIPEISADTNL DELTLMDGKKVLVQGKDYDVTKKQDGNKVTVTITFKGNYTGTITKSYTVDDKKLVLNPNT DKNTPSGQTGAVKTGDNAASGFWIVLMAMAAGTAVLTGRKRYKEK >gi|224461044|gb|GG657760.1| GENE 247 261026 - 262915 1335 629 aa, chain + ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 379 620 189 432 433 77 22.0 6e-14 MNYIKSNWKIVLLPFYALFIFLAFTFMRSYTVTDADRLFLTPTFEDSNGWDIYKMENGTK KEASVQELFDSSGETFYLSRVLDKGMERAGYTVLELDGTTWQESVFLDGELLYTVNPGLD NRIGFVEFPKEYEGLPGMGEYVRLTLPPDYAGKTLTIAAAFNTTVDYRGLPMVRLSSENI LTQMLVSDANRIAMPAAAYMAAALLLLGLFFYNWYHGQKSYSILLLTAAALIQSLRVLLN FEFYFSSHFSLNFIPVGLLIPLSLELPILYLLLQMKRWKKWYAPFILAPLVLSLAAHLMP DSSFASSCDTLLYLPLLALCVFAVLEWKDKNAVFRLFTPALFAVIVVGITAASYLMLTGH GDSVFVSMLRFPTVMLYEAFQFYGGILLLLGGGVSFIQAVHKAADTQSELSVISAKNELI QENIQSIQESSTEIAGMRHDMLRHLHTMLDLSHAGNAERLQRYLEELTKETETIPPLRVC QHPVVNALVTRALAKAKRERIQMNLHVEVPADISIPDADLCTLLMNMLDNAIEALSLLPG KKERVLELTMHVRGRYLFVETMNPCDGTALTDKETGLFRSMKGAGHGYGMKTMSDIAKKY QSKLQIKQEDDTVTVRTALLMPDVTCPIQ >gi|224461044|gb|GG657760.1| GENE 248 262965 - 263702 390 245 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 7 244 1 231 234 99 26.0 4e-21 MGGGEGMYRIAICDDDEQFLHHLNRKTEEIMTENGLTRGRDFEIDVFSGAASMQRRMPED INCWNILLLDIELSDENGIELARTLRKQQVTCSIVYITAYRDYVFDCFDTQPLWYLLKPV DFKKFETILMADYLRSYAGTRLSLKIEGRQVFIPFPDIYALESTQHRTRIWLGDSFRDWN GALSALKPQLPAFGFCQSHNSYIINLSHVREIQRMDVLMDNERTFPISRRCYDQFFEKYF AFLKI >gi|224461044|gb|GG657760.1| GENE 249 263778 - 265283 992 501 aa, chain - ## HITS:1 COG:HI0928 KEGG:ns NR:ns ## COG: HI0928 COG0753 # Protein_GI_number: 16272865 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Haemophilus influenzae # 1 478 10 487 508 633 64.0 0 MEVKKLTNEVGAPVAENENSLTAGPRGPVAMQDVWLLEKLAHFDREVIPERRMHAKGWGA YGTFKVTHDITEWTRAKVFEPGKETEVFVRFSTVAGERGAADAERDIRGVACKFYTEEGN WDLVGNNTPTFFLRDVHNFPDLNRAVKRDPRTGMRSAQNNWDFWTLLPETFHQTTVVMSD RGIPASFRHMHFYGEHTFSFYNAENKRVWCKFHFRTQQGIKNLSDKEAAELIAVDRESHG RDLYESIEKGEYPRWTLYVQIMTEEQALKHYENPFDITKIWRHKEFQLHEVGVLELNRNP ENYFAEVEQAAFTPAHVVPGIGFSPDKFLQGRLFVYGDAQRYRLGINYNQIPVNKARCEV NDYHRDGAMRVDGNYGGRPAYTPNSAGDWAAQPDVMEPPLDLSGALYAYDPKDDPTDDNF RAGGDLYRVMTEEKRAVLIENTANNIAPVTENIKYRHAVHCYLADVEYGTRMTEALGLDF DKVKELSALSNEELIRATLRE >gi|224461044|gb|GG657760.1| GENE 250 265479 - 266093 198 204 aa, chain + ## HITS:1 COG:no KEGG:BpOF4_17240 NR:ns ## KEGG: BpOF4_17240 # Name: not_defined # Def: hypothetical protein # Organism: B.pseudofirmus # Pathway: not_defined # 8 203 15 210 210 164 46.0 1e-39 MKKNAAPIFFIYGIIAGILCRLTDFCPADSIWCFSSVATLFGFWIICIVIIVLKSTSNLS SGINTFLYMFGMTLSFYVLKYILGLLSPAFDNDEFQTNLFILYSVLSLGCGIGAYILYWW NKEIKGNAVLYALPIGALLAETIGVLIYFMNNKVFLFQLLMDIIAFVTLGAMFYKRVKSK VIYTAAIFVITFTVYMIVYRPFLT >gi|224461044|gb|GG657760.1| GENE 251 266162 - 267304 843 380 aa, chain + ## HITS:1 COG:MA2291 KEGG:ns NR:ns ## COG: MA2291 COG1453 # Protein_GI_number: 20091129 # Func_class: R General function prediction only # Function: Predicted oxidoreductases of the aldo/keto reductase family # Organism: Methanosarcina acetivorans str.C2A # 1 368 1 378 400 147 27.0 2e-35 MKYVNYPGTDKQVSVVGFGGLRFDLDKTDEENADMILYAYDKGINYFDTAPGYCDDRSEK IFGIAFRKLLAEGKTDFYVSTKSKPKMCPTKELAIASVKRSLEIMGIPKIHFYHVWCIRK MEHYELSMAEGGQYEGLKWCQEQGLIDHICFSSHQPGEEVVQVLDAHTFTGVTMGINLLN FPYRWKGVEYAYQKGYGVVAMNPLCGGTIPAHEKELAFLAEPGETVTQAALRFNIASPEI TISLIGFSRKSDIDEACEMADHAVPFRASDLERIKEKFHGATKEICTGCGYCRVCPKGIN IPAYMLLYNEKQMFHKTDEEMIDMVYGLEYYNYSANTKGRAGDCIKCRKCEQECTQHLGI VRRLEEIAGWESQTEDTVTV >gi|224461044|gb|GG657760.1| GENE 252 267379 - 268815 926 478 aa, chain - ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 213 473 2 266 286 214 43.0 2e-55 MKRIMAAALIICMMLTLASCSSQEKAKGAKTNQQTETDSAKHILTAYFSCTGTTEQIAGW IADKTDSDIYQITPQSPYTKDDMNYGDSSSRTTTEQNDASARPEISGRVEDMDKYDVIFL GYPIWNGQAPRIISTFLESYDFSDKTIIPFCTSHSSGIGSSDTQMHSLCPDSVTWKPGER FSADTTSDEVNDWVGGLNITMETSANTGVFHFETKKVLLNSGYEMPIMGLGTYSLSDEEC ENSVKALLEAGGRLIDTAYMYHNEGAVGKAVRESGIPREEIFVTTKIYPSQFENAAGAID EALEKMDMEYIDLMLLHHPGDGDVEAYKAMEQAVADGKLRSIGLSNWYVEELEDFLPQIT IMPAVVQNEIHPYYQENEVIPYIQEKGIVVQGWYPFGGRGHTAELLGNETISAIAQAHGV TSAQVILRWNLQKGVIVIPGSSNPEHIRENLELFSFELTAEEMEQINALDRNEKHDWY >gi|224461044|gb|GG657760.1| GENE 253 268890 - 269864 819 324 aa, chain - ## HITS:1 COG:PA2218 KEGG:ns NR:ns ## COG: PA2218 COG1073 # Protein_GI_number: 15597414 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Pseudomonas aeruginosa # 4 323 49 367 367 382 60.0 1e-106 MKEQLNLTKEWDKTFLQSEKVDHSKVTFHNRYGITLAADMYVPKNAEGKLAAIAVCGPFG AVKEQASGLYAQTMAERGFLTVAFDPSFTGESGGIPRYVASPDINTEDFQAAVDFLSVQE NADPEKIGIIGICGWGGMALNAAAIDTRIKAAVASTMYDMGRVNAKGYFDSEDSEEARYE KRKALNAQRIEDYKNGEYALAGGVVDPLPEDAPFFVKDYYDYYKTDRGYHARSLNSNGGW NITSSLSFLNMPILQYSQEIRNAVLLIHGDKAHSCYFSRDAFEKLEGENKELMLIPGAVH TDLYDRTDVIPFDRMAEFFKKYLV >gi|224461044|gb|GG657760.1| GENE 254 269941 - 270711 944 256 aa, chain - ## HITS:1 COG:Ta0191 KEGG:ns NR:ns ## COG: Ta0191 COG1028 # Protein_GI_number: 16081345 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Thermoplasma acidophilum # 6 256 13 260 268 141 39.0 1e-33 MDAKMLEGKVAIITGASYGMGQTMAELFAEEGASVVLTARGKEKLDKVVEGIRENGGKAI GVVADTCSTEDTKRVMQETLAAFGDLDILINNAGIGEQKMIDETDDEWMMQVMNTNLGGP MRYIREALKIFMPKNEGIIINISSVNGDRPFCGATYTSTKGALNTLTKNVAMRLVDTNIR CNAVAPGATITPAHLANKAGEQPGGNEMLKYSGHYVYFPGPECDAMDQAYACLYLASKMG KAVKGQVLQVCNGAFL >gi|224461044|gb|GG657760.1| GENE 255 270726 - 271265 438 179 aa, chain - ## HITS:1 COG:MA0418 KEGG:ns NR:ns ## COG: MA0418 COG0655 # Protein_GI_number: 20089311 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Methanosarcina acetivorans str.C2A # 1 179 1 179 179 155 42.0 5e-38 MGKNILVISTSLRKGSNSEILADALIRGAKEAGHRVEKVCIRDKEIAFCRGCLACQKTGR CVIQDGGDEIARKMLAADVLVFATPIYYYGMSGQMKTMLDRANPLYFLDYRFRDVYLLAT AADEEEQAMDGVLNGIQGWISCFEKAQLAGSVFAGGVDQAGEIENHPVLERAYRLGKEI >gi|224461044|gb|GG657760.1| GENE 256 271266 - 271478 155 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571015|ref|ZP_03780032.1| ## NR: gi|225571015|ref|ZP_03780032.1| hypothetical protein CLOHYLEM_07113 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07113 [Clostridium hylemonae DSM 15053] # 1 70 1 70 70 120 100.0 2e-26 MFQNLKDAGCGPDIIEDFLLYFDREQKEEQITLLEKHRRELLNVVHKAEKKIYCLDYLIY QIKNEKERGI >gi|224461044|gb|GG657760.1| GENE 257 271512 - 272687 1346 391 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 4 389 3 388 389 283 38.0 5e-76 MLGNFVFSNPTKLYFGEDSLNYLHEELLKYGKNVQLVYGGGSIKKNGIYDKVIDILKANG KAIFEDGGVMPNPTVEKLYEGVRIARENQVDFILAVGGGSCCDYAKAVSISVNCEEDPWE KYYLNFEDVDMDTKIIPVGCVLTMVGTGSEMNGGAVITNHESKLKIGHVFGERVFPKFAV LNPAFTYSLPKYQMTAGFYDIMNHICEQYFSGGDDNTSDYLMEGLMRSLIHSSRIAVKDP ENYEARSNIMWTATWALNTLVAMGKSTDWMVHMLGQAVGAHTDATHGMTLSAVSLPYYRH IMPYGLAKFKRFAEYVWNIEPEGKSDKEIAEEGLRAMEAWMNEIGVAMNIRELGVTEDML ENLVKSTLVMEGGYKVLTQEEILEIFKESLK >gi|224461044|gb|GG657760.1| GENE 258 272890 - 273789 834 299 aa, chain + ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 292 1 287 291 231 41.0 1e-60 MELRVLQYFLAVAREQSIVRAAESLHLSQPTLSTQIRNMEEELGKQLLIRGTKGSRKVTL TEEGMILRKRAEEILDLVKKTEKEITCSDEIIIGDIYIGAGETDAMRIIAKAAKKLQKDY PGIHYHLSSGNATFVKERLDKGLLDFGIVFGEVDLIKYNAIRIPAKDVWGVLMRKDSPLA SKEVISPEDLWDKPLILSQQENRGGDITQWLKKQAGELNITATFNLIFNASILVDEGLGY AISFDRIINTTGNSNLCFRPLTPKVEAEMNLIWKKYQILSKPAEKFITILKEQLNDGPP >gi|224461044|gb|GG657760.1| GENE 259 273798 - 275045 1410 415 aa, chain - ## HITS:1 COG:XF0274 KEGG:ns NR:ns ## COG: XF0274 COG0205 # Protein_GI_number: 15836879 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Xylella fastidiosa 9a5c # 2 407 13 413 427 256 39.0 7e-68 MEKNVIVGQSGGPTAAINSSLAGVYRTAKDRGAKKVYGMLHGIQGLLEERYIDLADHIKT ELDAELLKRTPAAFLGSCRFKLPEIHEDREVYEKIFSILDKLEIEAFIYIGGNDSMDTIK KLSDYAIITGHPTRFVGCPKTIDNDLALTDHTPGYGSAAKYIGTSMKEIIRDSFCLEYNK GLVTIVEIMGRNAGWLTGAAALSEGEDCEGPDLIYLPELPFDIRKFGERVKKLLAKKPSV VVALSEGIRTGEGKYVCELGNSVDFVDAFGHKQLSGTAAFLANYIAGELGCKTRAIELST LQRSASHAASRVDILEAYQVGGAAVKAADEGDSGKMVVLQRLSDDPYQCGTEVKDVHKIA NDEKLVPREWVNKEGTYVTNEFISYVRPLIQGDVSPVMVDGIPRHLYRPIELVRR >gi|224461044|gb|GG657760.1| GENE 260 275115 - 275492 481 125 aa, chain - ## HITS:1 COG:CAC1324 KEGG:ns NR:ns ## COG: CAC1324 COG3862 # Protein_GI_number: 15894604 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Clostridium acetobutylicum # 4 118 3 114 117 92 48.0 1e-19 METIEMTCIICPNGCALKVQTEDKEVVDVTGNMCMRGYAYAQTEVQNPTRMLTSTVDVTG GELPRVSVKTEKEIPKEKLMECARQLKGITVAAPVYIGDIVAENIADTGIDIVATVNVPK KTSFL >gi|224461044|gb|GG657760.1| GENE 261 275480 - 276484 1091 334 aa, chain - ## HITS:1 COG:CAC1323 KEGG:ns NR:ns ## COG: CAC1323 COG0446 # Protein_GI_number: 15894603 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 4 330 3 325 417 397 63.0 1e-110 MQEYDIVIIGGGPAGLAAALSAKEHGVGSILILERDRELGGILNQCIHNGFGLHTFKEEL TGPEYAYRYIEKIIEQKMEYQLQTMVMNIEVLEDGMKIVTAMNSRDGMIHIRARAVILAM GCRERPRGALNVPGYRPAGIYTAGTAQRLVNMEGYMPGKEIVILGSGDIGLIMARRMTLE GAVVKAVAEIMPESGGLKRNIVQCLEDYNIPLKLSHTVVDIKGKEHIEGVTLARVDAHKK PIPGTEEEYRCDALLLSVGLIPENELTRGMGAAMNERTKGPEVDGRLETTVPGVFACGNV LHVHDLVDNVSREAAEAGRYAAEYIEGDVRAWRQ >gi|224461044|gb|GG657760.1| GENE 262 276496 - 277926 1418 476 aa, chain - ## HITS:1 COG:CAC1322 KEGG:ns NR:ns ## COG: CAC1322 COG0579 # Protein_GI_number: 15894602 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Clostridium acetobutylicum # 1 473 1 475 475 442 49.0 1e-124 MYDAVIIGAGVSGCATARELSAYEGKFCVFEREEDVCCGTSKANSGIVHAGYDAVPGTLK AKLNVRGNELMETLAGELDIPFVRNGSVVVCTEDQDREKLKRLYENGRQNKVPGLRLLTG EEARRLEPNITKDAAAALYAPTGGIVCPFELNIALAENACVNGVEFKFGAEVSDIKRTEG GYEITAGGRMYETRAVINAAGVYADVFHNMVCEDQIHITPRKGEYMLMDKPAGAHVGRTI FTVPGKYGKGVLVTPTVHGNLMAGPTALDIEDKEGTNTTAAGLEEVRRKCAQAVTGVPLD QVITSFAGLRAHESGRDFIIQESGPYFFDCAGIASPGLTSCPAIGEMLAGMTAKRLALHK KDRFISRRQGIVRPGALPEEERNELMRKEPAYGNIICRCEMITEGEILDAVRRPVGARTM DGVKRRTRAGMGRCQSGFCAPKVMEILARELGVSLLDITKSGGASRMLAGRDKEEL >gi|224461044|gb|GG657760.1| GENE 263 277926 - 279440 1701 504 aa, chain - ## HITS:1 COG:FN1839 KEGG:ns NR:ns ## COG: FN1839 COG0554 # Protein_GI_number: 19705144 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Fusobacterium nucleatum # 3 494 2 495 497 661 65.0 0 MAKYVMALDAGTTSNRCILFDEKGRICSVAQKEFTQYFPKPGWVEHDADEIWSTQLGVAV EAMSKIGAEAGDIAAIGITNQRETVIVWDKVTGEPVYHAVVWQCRRTAEYCDSLKKQGLE EFFRKKTGLKIDAYFSATKIKWILDHVEGARERAGRGELLFGTVETWLIWKLTKGRVHVT DYSNASRTMLFNINTLEWDREILELIGIPECMLPEVKPSSCVYGEADASFFGGAVPIGGA AGDQQSALFGQTCFLPGEAKNTYGTGCFLLMNTGEKPVFSENGLVTTIAWGLDGKVCYAL EGSIFVAGAAIQWLRDELRLIDSAADSEYMAKKVPDTNGCYVVPAFTGLGAPHWDQYARG MIAGLTRGVNKYHIIRATLESLAYQVNDVLKAMEADSGIHLSTLKADGGASANDFLMQTQ ADLSAAPVSRPQCVETTAMGAAYLAGLAVGYWENKEDVIKNWAIDKTFEPHITEAERNKR IKGWNKAVTYAYDWAKDEGEEGVD >gi|224461044|gb|GG657760.1| GENE 264 279534 - 279788 278 84 aa, chain - ## HITS:1 COG:no KEGG:ELI_0858 NR:ns ## KEGG: ELI_0858 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 75 74 148 148 74 50.0 1e-12 MIERTSDEATDKIDWTKAWSKKYPILGRYQNEVEVSYYASELCRLICDLEKKYGYDDLNA FLVLKDILAAVWKNRKKRTNGDNS >gi|224461044|gb|GG657760.1| GENE 265 280082 - 281983 2016 633 aa, chain - ## HITS:1 COG:no KEGG:MA2541 NR:ns ## KEGG: MA2541 # Name: not_defined # Def: hypothetical protein # Organism: M.acetivorans # Pathway: not_defined # 239 631 69 457 462 282 45.0 3e-74 MKRGVVCVLAGTLLTAMAVSGCQKGSAEEKTETLYGEITEIDGSNITLALGEAPEAGEAP EEGKPDGEAPDGGKAPAEGAASGKEETPPEKPEGETASDEEADDGGGAAKGEVPDGEAPG GSDMPKGGPGGITLTGEEKTITADDETKVEKISGMPAAPQGGENSEGKKESDADSDEGSK KEGAGQPETTEASLDDLTEGDIVTVEMQGENVISITLRSMDGGALSGSAEGTVELSGVYT VDGKEEMSDGETYNSEAADENAVLVKNGGFLELTNAVLNKSGGSSSADESNFYAVNAVLA AAGGSTATVSDITLTSDSEGSNAIFATGEDSKITANNIKIHTKGNSSRGLDATYGGSVIA TNVDITTEGDHCAPVATDRGEGTITVDSGKLSAAGEGSPCVYSTGNITVKGVTGTAAGSQ AAVVEGKNSITLEESELTGAGENGVMLYQSTSGDAEEGTARFTATDSVLTYASTGPMFYI TNTDAEATLENTKLTYNSGVLIKASGNNTNNWGKEGENGGNIKLKGIDQELDGDVTCDEI STVDISLTESSILRGTVNGKNTGKEVRITLSQDSKWEVTGDSYVTLLTDKDKDLKNIVSN GHTIYYDASDSKNEWLNAETIELNGGGSLTPAE >gi|224461044|gb|GG657760.1| GENE 266 282159 - 282626 687 155 aa, chain - ## HITS:1 COG:MK0529 KEGG:ns NR:ns ## COG: MK0529 COG4087 # Protein_GI_number: 20093967 # Func_class: R General function prediction only # Function: Soluble P-type ATPase # Organism: Methanopyrus kandleri AV19 # 1 154 2 157 158 113 43.0 1e-25 MKIDIPDYKILDLKYLVLDYNGTIAVDGKIPQGVREQLKALSKELEVYVLTADTYGSAME ECEGLPVKIETFPSGNAMAAKDAIVESLGRENCACMGNGRNDQLMCRMAALSIAVMDSEG MCGKLIREVDVCVRSIEEGLELMLNHKRLIATLRG >gi|224461044|gb|GG657760.1| GENE 267 282837 - 283079 257 80 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2061 NR:ns ## KEGG: Cphy_2061 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 78 1 78 79 67 52.0 2e-10 MNLNSLALLQQMKNQIGKFKTRHPKFPLFLNAVSENALLEGTVIEITVAAPGGQNYTSNI KLMPEDIELIQTLKKMDQIN >gi|224461044|gb|GG657760.1| GENE 268 283135 - 283833 708 232 aa, chain - ## HITS:1 COG:FN0805 KEGG:ns NR:ns ## COG: FN0805 COG4912 # Protein_GI_number: 19704140 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Fusobacterium nucleatum # 4 230 19 251 251 133 35.0 2e-31 MDNKEIRKILEKMAEPEFQKFASSLIPEMPAEHLIGVRLPKLRRLAKQLAKEDWRGYLRT ALDESFEEIMLQGMVIGYAKADIQEIKAWTDHFLPKIDNWSVCDSFCAGLKVTKEYPEEM WDYIQGYLTSERTYDIRFAVVMLINYYIDDTHIEQALRSIEKIQNGSYYVKMAAAWAVSM YYVYDSSRTEAFLSDTVLDDFTYNKALQKICESRQVSRETKEKIRAMRRKFP >gi|224461044|gb|GG657760.1| GENE 269 283857 - 284315 207 152 aa, chain - ## HITS:1 COG:MA3570 KEGG:ns NR:ns ## COG: MA3570 COG0454 # Protein_GI_number: 20092376 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Methanosarcina acetivorans str.C2A # 7 146 2 140 140 99 37.0 2e-21 MTAEHTIRKMKAEDLDVVMEIWLDTNMRAHNFISQSYWEDNVQSVRDMISKAEVYVWEED IGGAIRGFIGLCGNDVGGIFVSSTAQSAGIGSALMAHVKKIRQSLTLTVYEKNKRAVRFY EHERFRIKSETVDENTKEKEFIMVWKAQGQTD >gi|224461044|gb|GG657760.1| GENE 270 284312 - 284509 300 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571030|ref|ZP_03780047.1| ## NR: gi|225571030|ref|ZP_03780047.1| hypothetical protein CLOHYLEM_07128 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07128 [Clostridium hylemonae DSM 15053] # 1 65 1 65 65 90 100.0 5e-17 MKEKSGIIILSIVTFIFSALAASIGFGLLGDSGLSFTLRVLCGFCFIVTPLLVIQLIIAL FRKRK >gi|224461044|gb|GG657760.1| GENE 271 284677 - 285093 582 138 aa, chain - ## HITS:1 COG:no KEGG:ELI_1767 NR:ns ## KEGG: ELI_1767 # Name: not_defined # Def: putative lipoprotein # Organism: E.limosum # Pathway: not_defined # 1 138 2 138 138 64 35.0 2e-09 MKKFFAALGVLLLVGGITGCSRSQELPDDFDENEVKKAAEEVIDLVNAGEYEKLTEEKWN AQLKTALPAEKMSEEIQPVIEELGAFQSFENEAVAGGEDKDTEQEFAVVVVKAKYEERKV QFTISFDKNMKTAGFFIK >gi|224461044|gb|GG657760.1| GENE 272 285140 - 286474 1037 444 aa, chain - ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 206 434 207 450 452 83 22.0 8e-16 MGFMESAACNIILAVSETVSVTVCTWYFTSHTKGNINKPARSRALAFLGFWAGYTGLAYG FRSTAYANVPAIVFMIAATMLIGHNMYNDRRMYLFYYFLYPVTFVLMQLFIIYLVLGFIV SQWGLPGFDLYSANIALIIKQPAALLLTGVWTALLNRRQFEDVTGFQFAGLFLPPLISAF IIASFFVLGNVYIQLYGVFLIIVDICCLVFMNLYILYLFSYQSRNRKLREELRLFQRQSE MQYRYYERIEQKYESSRKLIHDMRNHLQSIEALYHMNESEAGNAYAKDMHKMLDRFGQRL YTDCHMLNIILNDKAETARQRNIDMEVRIGAVELHHMKDMDVTTVFANLLDNALEAAEQF GGRKYISVKADAFRDFNVVKICNSYDPEQNGKRNRGDSGHRGLGLGNVKQTLKRYGGGMD IEEGDSVFTVSITIPRPEAAAGKE >gi|224461044|gb|GG657760.1| GENE 273 286524 - 287222 577 232 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 220 1 222 234 108 31.0 7e-24 MYRVAICDDDFNIRRLIQRAVENSGTECGISEFAGGMELLDGYTGYDVLFLDIDMPGMDG LETASRIRKSDRSVRIIYVTGYEDYMRQSFNVHPFSFLLKPVSEEDIRRQFSEACAYGRE REQKRTLHFAAFGGTIETDVYDIYYMEYVSRKIRMVTQSGEYILKGKISELARRMEGYGF AAPHKSFTVNLYHVKSIKGYDIYMVNGDIIPLSQKRSTQFRGKLGRLQAEYI >gi|224461044|gb|GG657760.1| GENE 274 287412 - 288170 577 252 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1948 NR:ns ## KEGG: CDR20291_1948 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 15 250 15 250 254 310 61.0 4e-83 MDFIKVDDTNIEKEHICCCITNKKGENCVSSKKEWMQGCLKDGLVFLKADVRGKVFIEYM PAENAWYPIDAPGYMHINCFWISGQYKGKGYANQLLEQCIEDAKKKGKCGITIISSEKKR SFLPDPDYMKYKGFTAADTASPFFVLYYLPFTDSAPLPRFKECARSGKIDEQGMVLYYTN QCPHTAKYAPLLSSIAEQHGTSVSVRKLETAAQAQNAPSPFTTYSFYYNGQFVTNEIFSE KKFEKFLQAHGL >gi|224461044|gb|GG657760.1| GENE 275 288202 - 290037 1909 611 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 1 609 1 587 714 570 46.0 1e-162 MDKYEVLKQYFGYDEFRDGQNVLIDSILEGRDTLGIMPTGAGKSLCYQIPALLMGGITIV VSPLISLMKDQVEALNQAGVHAAYLNSSLTVNQYYTALRYAKEGRYPIIYVAPERLDTGE FLDFAMHTDISMVAVDEAHCVSQWGQDFRPSYLKIVTFIEKLPKRPVVSAFTATATAEVR ADIADILRLREPLVTTTGFDRPNLYFAVQSPKDKFAALLNYVERHKGESGIIYCLTRKYV EDVCARLQAEGFSVTRYHAGLGDGERKSNQEDFIYDRADIMVATNAFGMGIDKSNVRYVV HYNMPKNMESYYQEAGRAGRDGEASECILLYGGQDVVTNQLFIDNNRENDELDEFTAEVV KERDRERLRKMTFYCFTNECLRDYILRYFGEYGENYCGNCSNCLSQFETVDVTESAAAVV NCVSACRQRYGINVILDTVHGANTAKIRQYRMDENPQYGVLAKVPLYRLRQIINHLLLKE YLMLTTDGYSIVKLTEKSRQITCGEEQITMKMPKEAEKETKKHKETKGKKKKTAGLSAAD EPMFEKLRELRMEIAREEKVPPYLVFSDKTLVHMCVEKPADRAGMLSVSGVGEYKYEKYG ERFLEEIQKLC >gi|224461044|gb|GG657760.1| GENE 276 290061 - 290678 709 205 aa, chain - ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 2 183 3 183 183 218 53.0 9e-57 MTEKELMLSGQLYIAKDEELTEEFMRAKRLTRLFNNTTEEEAEYRAQLLKELFGKTGENL YIEPSFRCDYGKNISIGDNFYANYDCIIVDVCSVSIGDNVFWGPRVCVYTAGHPIDAGIR NTQLEFGSKVSIGNNVWIGGSTVINPGVSIGDNVVIGSGAVVTKDIPSGVIAAGCPCKVL REINEDDKRYWEEQAKKYRENKRTE >gi|224461044|gb|GG657760.1| GENE 277 290721 - 291404 630 227 aa, chain - ## HITS:1 COG:CC1115 KEGG:ns NR:ns ## COG: CC1115 COG2013 # Protein_GI_number: 16125367 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 1 216 23 251 280 145 37.0 5e-35 MKYEIQGETLPVVICQLEAGEKMITEGGGMAWMSPNMLMETTTNGGIGKAFGRMFSGERM FQNIYTAQGGEGMIAFASSFPGSVEAFQVGPGQEMILQKSAFLAGEASVELSVFFNKKFS SGLFGGEGFIMQKAGGYGTVFAEFDGHVIKYELQPGQQIVVDTGHLAAMSATCSMEIKTV PGVKNMLFGGEGIFNTIITGPGKVWLQTMPISNVAGVLRPYLPSSGS >gi|224461044|gb|GG657760.1| GENE 278 291523 - 292410 711 295 aa, chain + ## HITS:1 COG:BS_ybfI KEGG:ns NR:ns ## COG: BS_ybfI COG2207 # Protein_GI_number: 16077291 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 4 276 2 274 275 262 47.0 5e-70 MPKEQEQRHVYYDRDLKIEAYNLSGIVQKFPNHFHEFYVIGFVEGGSRHLWCKAQEYDLT AGDLILFNPHDNHYCAPLGGEILDYRAVNIPPDVMEKAASEITGKNFIPHFTQNVVYQSD ITQSLGRLYDAILKGGPRMEREEAFFFLLHQVLEDYAAPFDEAELIQPNPQVQMLCSYMD EHFSENITLDDLLTMTSFGKSYLIRSFTRQVGVSPYRYLQTVRLGRAKKFLEQGVPPIDA SDMAGFSDQSHFTNFFRDFTGLTPKQYQRIFTDSRHAASPEAVLTGTDHDEREEP >gi|224461044|gb|GG657760.1| GENE 279 292416 - 293336 623 306 aa, chain + ## HITS:1 COG:BS_ybfH KEGG:ns NR:ns ## COG: BS_ybfH COG0697 # Protein_GI_number: 16077290 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 292 1 292 306 260 53.0 3e-69 MTEKNVSRGHLAAFITIFIWGTTFISTKVLLKSFTPIEILFIRFLIGYAALWCVRPKFMP LRGRKQEGIFLLAGLCGICLYYLLENISLTFTQASNVGVIISTAPFFTAILTKLVSREKE QLGLPFFLGFIAAMAGICLISFSDGGASLNPTGDLLALLAAFIWACYSVLTKKISGYGYS TIETTRRVFFYGIMFMVPVMFFSGFRPDMKALLVPVNLGNILFLGLGASALCFVTWNAAV RILGAVKTSVYIYLVPVITVTASVLILKEQITLKACIGMLLTLAGLWISEHKWEYKRKSP CYTINK >gi|224461044|gb|GG657760.1| GENE 280 293444 - 294292 900 282 aa, chain - ## HITS:1 COG:no KEGG:CLH_2455 NR:ns ## KEGG: CLH_2455 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 10 277 5 272 272 137 38.0 7e-31 MNKRQQLIPLNNLNLTDRFLFEEVMEDPLTHREALSIIFGREIPLLDQNEAEKELRISPE ARSIRMDVFSMDVEKTVYNTEMQKQRRADLSKRSRYYQSLVDISLLEPGVPDYSALNESY IIMITPFDLFGFGKYRYTFRPVCVEEPKCVLEDGATRIFLNTRGKNEDEVPAELVQFLYY VEHTTDEAAEQTGSERIKRIHDRVRKVRNSEEVGVKYMQAWEEKYYEKEEARKEGLEQGA KKQLIELIKKKLEKGKSVEEIADALEESTDKIEELIKEMELE >gi|224461044|gb|GG657760.1| GENE 281 294602 - 296887 1590 761 aa, chain - ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 230 761 586 1135 1136 179 26.0 2e-44 MLTKKMLRDIHRNKVQFMAIFLMMFVGCFLFSGITGEWRGLEEHFQTYIDEQNMADMWTY GDLTGRDIDKIRNDVRINEAEGRMVLPMVPAGNKESTLQCYMAQSSHISKLYVKKGIAYD SSKKGIWLDALYARENSYKVGGQIELDYKDMEIKGEILGLVYSPEYIYGASEGEMMPEHK NTGFAWISPKLLPAGVPLHYNEAAVITAGVQRKQIIQDILGEKEVKTIVRAEHPAISMVK DEIKQHQTIGTAFSAAFLLIAVMIVMTTMHRMLKNEKMQIGILKALGFTKKKLILHYLSH NAFICLTGALGGFICGYRFLPGLIYKFMRQMYVIPVWGGYLPPVYYLLPLGCTVFCVLIS FFICRRYLKPNAADILYTDMPFAGGKQFPGTMELLGFAGRWNLRDIARNRLRSFMSLCGV LGCTALLFCAFALYDTFVNLSDWTFTKQQNYECKITDLPEEKGQKELLAMTDGEYLMESS ASILTGGTSGEGADRERGKKGEKEVALTVSESTRYLKLAENLDTFTAVDGGVALSKKTAD SLGIRKGGFLTWKPAGGTSYICSEVKAIVRTPLSQGIIMQRSDYEAAGQVYKPTAVIGKE PANGFGTYEEQCSISHQRELVEGVDSMMDGMVMMIMLLVLGAVILGSVMLYNLGILSYME RYREFATMKVLGFADKKIRKIMIQQNVWLSALGILLGMPAGYGLLYYLLSTIPESMDVPV FIRTASWLLSAAGTLALSFVVSRVVSRKIPRINMVEALKQM >gi|224461044|gb|GG657760.1| GENE 282 296887 - 297588 211 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 4 218 5 215 311 85 28 2e-15 MSIVALEKVSRIYESGGQKLYALNKVSFTVEEGEFTVILGPSGAGKSTLLNILGGIDRAD EGEVKIAGRDISEMNEKELSTYRAEKIGFVFQFYNLIPTLTVRENVALMKELKKDAVPAD EALEKVGLRGHGRKFPEQLSGGEQQRVSIARALAKNPDLLLCDEPTGALDSETGCMVLSE LRRLCREEGRTTLIVTHNANLAKAADRLVRVKNGQIVENRVNEHPVSIEEVEW >gi|224461044|gb|GG657760.1| GENE 283 297829 - 298437 584 202 aa, chain - ## HITS:1 COG:MA1701 KEGG:ns NR:ns ## COG: MA1701 COG3153 # Protein_GI_number: 20090553 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Methanosarcina acetivorans str.C2A # 4 193 20 208 217 157 42.0 8e-39 MIFRLEEQIDHNDVEQLTREAFWNVYQPGCCEHLVLHKLRESEAFIRELDFVAAEDGKIV ANIVYSRMYKDGRMCSSIAAFGPVSVHPDHQGKGIGGKIITYTLQKAKETGIKAVMITGS PQYYCRFGFVPASKYDIYLPGADRDKENEFFMVNELEEGYLKACAGTYDFDKSFMVKEDE VDAFDKKFVPKVKREARESDIL >gi|224461044|gb|GG657760.1| GENE 284 298500 - 299090 683 196 aa, chain - ## HITS:1 COG:no KEGG:ELI_3761 NR:ns ## KEGG: ELI_3761 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 189 1 187 193 92 33.0 9e-18 MQTKKESIGEEILKAAQKEFLLHGYEAASMRVIARKANTTLGNIYHYYPSKESILSEILK EPLEKLAKVTEGHLEQQDKVYSMEELLDALKNMNDLMDYEEFQCLLDERLLILFDLRTTQ FVEKREEFVKKFKSHMAWHLGLKDSDSPYIDILTSTFILCIRHVLLEHKDSEDAQKEFIK VFKMLCTGLAVNEEKL >gi|224461044|gb|GG657760.1| GENE 285 299710 - 300075 341 121 aa, chain + ## HITS:1 COG:CAC3399 KEGG:ns NR:ns ## COG: CAC3399 COG1733 # Protein_GI_number: 15896640 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 116 1 116 116 139 66.0 1e-33 MKMREEFTCPLELVHDMIKGKWKPIILWRLRLGATSLSKLEKDIDGITQKMLLEQLKELI DYGFVGKKSFEGYPLHVEYSLTEGQGRELLKALTIMQHIGIEYLKKQGKENVLIEKGVVP E >gi|224461044|gb|GG657760.1| GENE 286 300161 - 300667 219 168 aa, chain + ## HITS:1 COG:CAC3398 KEGG:ns NR:ns ## COG: CAC3398 COG1881 # Protein_GI_number: 15896639 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Clostridium acetobutylicum # 1 166 1 164 165 218 65.0 5e-57 MNVTSTGIIDNTIQDKFGGRGTQFNENGIPTCSLPIKIENAPKETVSFALVLEDKDAYPV TGGFVWVHWLAANITRRELKENESQKAQDFVQGNNSWTSIQGNQQSKALSCFYGGMTPPD RAHIYELHVFALDKLLELNNGFFLNELYSKMEGHILAQFTLKGSYDKV >gi|224461044|gb|GG657760.1| GENE 287 300745 - 301539 490 264 aa, chain + ## HITS:1 COG:CAP0001 KEGG:ns NR:ns ## COG: CAP0001 COG0300 # Protein_GI_number: 15004706 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Clostridium acetobutylicum # 4 253 2 251 251 308 64.0 6e-84 MVQKSEKYTVITGASSGIGYETAKAFAARSKNLIIVARRQNNLEALKNEILQKYPALDIV IKVTDLSILENVYRLYTDLKDYSLETWINNAGFGNYDSVAQQDLKKIETMLHLNVEALTI LSSLFVRDYRDIAGTQLINLSSAGGYTIVPTAVTYCAAKFYVSTFTEGLAHELRESGAKM QVKVLAPAATKTEFGKVANDVSNYDYDKLFGTYHTSQQMAAFLLELYDSNKIVGTVDREN FSFKLCDPLFSYSGNSKHNQKTSK >gi|224461044|gb|GG657760.1| GENE 288 301593 - 301889 409 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571049|ref|ZP_03780066.1| ## NR: gi|225571049|ref|ZP_03780066.1| hypothetical protein CLOHYLEM_07148 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07148 [Clostridium hylemonae DSM 15053] # 1 98 17 114 114 171 100.0 2e-41 MEQIMNYIKPELMTVAIALYFLGMWFKQAAFLKDKYIPLVLGIIGIFMCGIWIMATASCA TARDIAIALFTAVVQGILAAGVSTYINQLIKQAGKTEE >gi|224461044|gb|GG657760.1| GENE 289 302198 - 302524 172 108 aa, chain + ## HITS:1 COG:no KEGG:Bsph_3503 NR:ns ## KEGG: Bsph_3503 # Name: not_defined # Def: stage 0 sporulation protein A # Organism: L.sphaericus # Pathway: Two-component system [PATH:lsp02020] # 6 100 166 263 274 67 35.0 2e-10 MNKPRALLLRLGIRSTLKGFHFLLYALQLCLSNDEYLLSIYRTLYMDTAVHFKTSRDNVD HCIRTAISNCWYKGNRELLISIAGYELKQKPANGEFIDILYNYLYEEA >gi|224461044|gb|GG657760.1| GENE 290 302685 - 303011 161 108 aa, chain + ## HITS:1 COG:no KEGG:Bsph_3503 NR:ns ## KEGG: Bsph_3503 # Name: not_defined # Def: stage 0 sporulation protein A # Organism: L.sphaericus # Pathway: Two-component system [PATH:lsp02020] # 6 100 166 263 274 69 37.0 4e-11 MNKPRALLLRLGIRSTLKGFHFLLYALQLCLSNEEYLLSVYKTLYMDIAAHFGTSRDNVD HCIRTAIANCWYKGNRDLLISITGYELKQKPANGEFIDILYNYLCQEG >gi|224461044|gb|GG657760.1| GENE 291 303173 - 304012 466 279 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0275 NR:ns ## KEGG: Cphy_0275 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.phytofermentans # Pathway: not_defined # 6 248 3 243 276 170 38.0 8e-41 MEINQSEKTGKFICVMRKEKNLTQKDLAQKLDVTDKAISKWERGISCPDISLLIPLAKVL DVTTSELLNGERASEEQPEHAEAMVEEALHYSDRSSKLKLKRNRHIMLIVLTASFLIAIV TCLICDFCLNSSLSWSLIVIVSLLFCWVFLLPSFKAKNKIIKKTLAAASVLVIPYLAALS LILKQPLVFTLGACISVITAIVLWCIYIVFFILPGRKLCATGISFLLAIPASIGINRVIF LFTRQPGQTFSEYLMNTLGLSVLAAVCFGAHYLNSRRTE >gi|224461044|gb|GG657760.1| GENE 292 304039 - 304488 327 149 aa, chain - ## HITS:1 COG:no KEGG:TDE2416 NR:ns ## KEGG: TDE2416 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 145 1 145 147 209 68.0 4e-53 MCRECYVNESRITPLLGARECLENHTQYICGTCGRCICIQRDEKRGLQRWNFPFKSLEIA RLYLRTADYTVKRPCGIYEMKNSKGRVSYKIFACSEDFQDYLRKNRDKEATQAEPLFTAG RFVEYPDTEVRRLTSDEVENYLSERRQPD >gi|224461044|gb|GG657760.1| GENE 293 304607 - 305239 725 210 aa, chain - ## HITS:1 COG:MA1703 KEGG:ns NR:ns ## COG: MA1703 COG4845 # Protein_GI_number: 20090555 # Func_class: V Defense mechanisms # Function: Chloramphenicol O-acetyltransferase # Organism: Methanosarcina acetivorans str.C2A # 1 208 1 208 209 283 60.0 2e-76 MANSYKVIDEKNWKRSMHCQVFRNSVEPAFCVTFELDITNFLKEVKVKGYSFTMSLIYTV TKCANNIEEFRYRFVDGQVVLFDHIDTAFTYIDKETELFKVVNVPMKETAEDYVRTALKA AREQKEYFTGPLGNDVFQFSPFPWVSYTHISHTNSGNKENATPLFDWGKFFERDGRILLP FSVQAHHSFVDGIHVGKLADLLQDALNKTI >gi|224461044|gb|GG657760.1| GENE 294 305260 - 306087 908 275 aa, chain - ## HITS:1 COG:NMB1295 KEGG:ns NR:ns ## COG: NMB1295 COG0266 # Protein_GI_number: 15677162 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 272 1 274 275 75 29.0 8e-14 MIELPEALARAAELDKTIAGKTVAKVYPPSSPHKFCWFNGEPEAYDRQLRGREVQKAEGF GIFVELRFSGGFGLCFNDGVNVRLLEPSAGLPEKYQLRIDFTDSWVLIFTVAMYGGILCY EHTCANEYYVLSKERLSPLADEFDEEYFRGLLAGVKPGISAKAFLAAEQRIPGLGNGVLQ DILFRAGIHPKKKVGKLTAEETERLFGSVKGVLAEMSRLGGRDTEKDIWGSPGKYPTVMS KNTYRNPCPICKGEIVKTAYLGGSVYYCPRCQPLD >gi|224461044|gb|GG657760.1| GENE 295 306155 - 307054 900 299 aa, chain - ## HITS:1 COG:CAC3494 KEGG:ns NR:ns ## COG: CAC3494 COG2378 # Protein_GI_number: 15896731 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 297 1 299 300 226 37.0 5e-59 MKSSRLFQILYLLMERRDVTAGMLAERLEVSVRTIYRDLDALSAAGIPVYAQKGQGGGIR LMEEFKMDRSLLSGEQQEQILTALQSLDSVGAIEGSSLLTQMSGLFGKKAVGWLEVDFGS WGAMKKEKEYFEICREAILHCRLLSFEYFNSSGGWCERTVEPLKLCFKGGNWYVSGYCRR RRGFRLFRLSRILKLCIEDETFTPKVYKEGERPEPVQEMIPMKIRFSGEASFQVMDFFAP DDIEVEEDGTLLVNTAFPPGIWIKRFLLSFGALARVIEPEWVCRELLEEAEKIRMLYDI >gi|224461044|gb|GG657760.1| GENE 296 307072 - 309015 1616 647 aa, chain - ## HITS:1 COG:sll1170_3 KEGG:ns NR:ns ## COG: sll1170_3 COG2199 # Protein_GI_number: 16330880 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Synechocystis # 456 637 5 189 217 91 33.0 4e-18 MLHEREPMQKIFKKYTIIIMSIAVLSILVINFFLSENALRGRQLETFHAKIDQVIQTMEN NQTELASIKKNLDEDYLTRARAAAYVVEKNPGVLDSVEELENLASLLNVDELHVTESDGI IRYSSVPKYIGLDFHNGKQMRGFLPILESAGGDEYIIQEAQPNTAEKKMMKYVGVSRKGV KGLVQVGLEPVRQMEAQERNTYDYIFSRFPTDVGEGFFAMDVDSGEIVAYTGRSEEIAGL EDRGLESLKKCETGAFQTLAGGTQNYVVTRSHEGVLIGAFISNAALYHTFWKNILLTFLY LLAVEIVAVLLLNYLVKQKVVSGIHKLRDGLSRITKGELGTTVEVGGAPEFFDLSHGINS MVKSVVNSSDRISKIIAMSQIPLAAFEYQNDMDYVFVTSKLGELLDMDKEMLERYTKEPA AFLQMIRVFMEGPVENEEDVYRAGAQKYVRIHFTIEETGYYGTVTDATKEMMDKRQMLYE NNHDQLTGLARYPYFKETASQVLCSLKEDEICACVMIDLDAFKSINDTYGHDVGDRYLQE FAQVMKELPKDHCLVSRRSGDEFCIFVFGFETEDEIRTLLDGFWKELHTRAVSLGTGEKC MISASGGYVCTNDREMSMIRLLQQADKELYEVKRKNKGHYSWRQCTR >gi|224461044|gb|GG657760.1| GENE 297 309094 - 310338 924 414 aa, chain - ## HITS:1 COG:DR0623 KEGG:ns NR:ns ## COG: DR0623 COG0436 # Protein_GI_number: 15805650 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Deinococcus radiodurans # 75 410 67 383 388 116 29.0 7e-26 MLEFLSERGKKWVRTLPPLVKAHFDNFYNMYDKETNPKGLINMGTAESHLVNGEVCGLLR KAAERMDLTGYNIHYNKFEGSDEFRSAIADHWQKLIFGAGSEVKLRKENVAVCAGCTVAL ETLATLLAEPGDVFLIPSPYYSSFVDDIHERAGVIPVGVPCDESLDREAFEEAYAGVVKE GKRVRAVLFSSPNNPVGTVYGEAAVRGLLDFAMEHDLDVISDEIYAQTVFDPEAEFVSTL KLVPDAYRHRVHVTSSFAKDFVLSGFRTGLCISFNPCIIQGFASIIYYSCVSSHTQSLLT ALLRSPELPGIMELSRKRLAQAYDMITNGFEAIGVRTMKAQAGIFVMADFSAYMEKQEFE AEHTLWERIYNELMINVSPGQLFGCTRPGWFRACYAFDRDTVEEACRRLKTLKI >gi|224461044|gb|GG657760.1| GENE 298 310354 - 311148 1016 264 aa, chain - ## HITS:1 COG:RSp0697 KEGG:ns NR:ns ## COG: RSp0697 COG1028 # Protein_GI_number: 17548918 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 77 257 88 263 263 157 45.0 2e-38 MKKVLVTGGTQGVGLETVKLLLGQGYEVHITYRRSAGKAEELMRENPGRLFAYKLDQGKL EEIEDADFLTEHEWYGVIFNAALGSGTVKDYAEQGDPLKAANDVAMMTVNALGPLWIYKK IQPVIEAKTEKTKLIFISSVGGGIACFPKFTLSDGMSKCAVAYLARQLAAENTHTPIDVF CISPGAIETPMFYSSTLKDMTPEERAAFDAAQAKKRLIQPSEIAFWLGELLRDESTLMHG ANIDATMGLGVRPGIQTEAGLEHN >gi|224461044|gb|GG657760.1| GENE 299 311161 - 312285 1169 374 aa, chain - ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 8 351 2 340 400 107 26.0 5e-23 MEENRAKIGQVIAIGGAFMGFVIGSSFASGQECMQYFSGFGVAGSIGAGAIALILYAWFV STIVEDGRYLKLNNSGKMFNFYLGKYLGFVMEWFTPIMLFFVYSMMISGAGSTFEEYYGV NGNIGRAVMIIASLGTVLLGLEKLVKIVGYIAPVLLVVTMFIGILSIVNNPEGIALADQN LKTVQVNTNFNNWALSGLMYGAYTVTGVVPYLADIGKSTATNRKNSILGGLFGGGAFLIA VMILNFGLLANITDVYNLEIPSLFVAASISPVFGHVFSVLLLLGIYTTAVPMLYTVCNKI SSDGKSRAYRIAAVVTAIVSIFGGQLSFSTMISIIYPISGYAGIVIFAGMIYTKYIRKKK YEDFDEADVLIKKI >gi|224461044|gb|GG657760.1| GENE 300 312493 - 313863 1158 456 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571062|ref|ZP_03780079.1| ## NR: gi|225571062|ref|ZP_03780079.1| hypothetical protein CLOHYLEM_07161 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07161 [Clostridium hylemonae DSM 15053] # 1 456 9 464 464 922 100.0 0 MNNQFGKSLRSQMEKAGVKESELADALSYDATYISKWMNGSKLPSERNAERIIGQMADFF TARTDAADEAEREAGRQKCLADLKMSYAGDRNYHIFQDYNNNEMSFADNLQMLIQLTRAA FVQALNMYGGCISITATFDLFRLYGKEFRKLMTELHGAGVKKVELRLALDPEELAADHNY YAASIINTIGSFDYIEMYIVSRKPEQPRILVINDLLCLQVLWNMGGETGAVFSMEHKIIR QFSGICQQVMEAGEKLLDPAEPESLRRTNVQLDSYSDRRQWQFFNEPPAMLFPKEIMDVF IANAEDDSYARYLVKLKNVFARHTCKARIDLVLYSSKLNEYLTNGNISVGNVSHHLTAEQ TRSHLTYLSRVMSENPQIRLYVIRDTVVLSEELRRAPSIFLDTYSLNIENSKKQPNDNYH ISLDPRMRGAFQQFFENMLGMPFCNRLTAEDVLRYL >gi|224461044|gb|GG657760.1| GENE 301 313950 - 314627 877 225 aa, chain - ## HITS:1 COG:no KEGG:Cthe_0905 NR:ns ## KEGG: Cthe_0905 # Name: not_defined # Def: metal dependent phosphohydrolase # Organism: C.thermocellum # Pathway: not_defined # 8 224 4 220 221 238 57.0 1e-61 MKEKQKGISYKEIRENEELQLLIENGNSVLKVLGFTEHSRRHAAKVADRAGRILKELGYG KHEIELAKIAGYMHDIGNSVNRHDHAHTGAVLAYGILKDLGMPFKDVLTVTTAIGNHDEA TGTAVDVVSAALILADKTDVRRNRVQNLVIANFDIHDRVNYAALSSVLDVDKEKKNIRMT LELDDSMCSVMDYFEIFMNRMIMCRRAAEVFDCQFKLVANGNKLC >gi|224461044|gb|GG657760.1| GENE 302 314807 - 315490 704 227 aa, chain - ## HITS:1 COG:XF2023 KEGG:ns NR:ns ## COG: XF2023 COG5587 # Protein_GI_number: 15838617 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 7 218 19 233 237 73 26.0 4e-13 MNLQMILEYLNRLKENNNREWYHEHKPEYEAAAGEFLKLVEALMMELGKEEPGILRHEPK KLTYKLVRDTRFSKDKSPYNPAFRVHLSEGGKQPVPAGYYLMLTPGGSFLGGGLFADIFK EETGMMRDYIAAHGEEWEAVIRDESFSSLFEVKGTALKNVPAGYDREHPQAQYLKNKSWY VEYPLADEALADADRFISETVEVCRIIKPFNEFINKALAGSPFLRQS >gi|224461044|gb|GG657760.1| GENE 303 315503 - 316351 1085 282 aa, chain - ## HITS:1 COG:BS_sigW KEGG:ns NR:ns ## COG: BS_sigW COG1595 # Protein_GI_number: 16077241 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 19 192 15 186 187 68 28.0 9e-12 MDDTLQNEMACLVGRAVAGDKSAVEKILTEIQDLVFNFSLRMLGTIADAEDASQEILIKV MTNLSSFRRESRFTTWVFRIAANYLSDYKKNMFSKYPLSFEFYGEDIAGGREKDIPDLTQ GVEQAILEEELKMSCTNVMLQCLDKESRCIFILGTMFKVDSTIAGDILGISPEAYRKRLS RVRAKMAGFMREYCGLEGGMCSCRKRINYAIASHRLRPDDLEYSALEKGKDEILNGFKNA MERVDDLSFVFSGMPFYHGGREVKEWLQRFFDSDEYRTITEA >gi|224461044|gb|GG657760.1| GENE 304 316413 - 317993 1271 526 aa, chain - ## HITS:1 COG:no KEGG:Mbar_A0080 NR:ns ## KEGG: Mbar_A0080 # Name: not_defined # Def: hypothetical protein # Organism: M.barkeri # Pathway: not_defined # 1 525 1 522 522 401 44.0 1e-110 MIKAFRISCDLKNTYRVNGIIYSIQQIPVIKRLFTDELYASRGLKIFAGILSAAWEIVSA FLGKYLYLLLLVALPAGLYKGGGAGSVSMHILLFLTIIGTFMNTYMFDPSNDKYYAMILM RMDARAYTLSNYLYTSVKTVVGFLPFTIYFGMKWGAAPALYILLPFFIMGAKMTAAWLLL SRYERKGICMNENLPPKFAWPLTGILLVLAYGLPYIGITVPAAVISAAAALSLAAGLYCL TKIMKFGRYREMYQLILADKRNAVEVGEIIHKTTEEQSRKMISQDTAITSQKKGFEYFNE LFIRRHKRALWRPAGRTACIAAFIIAALLVVMQVNMEVKLAVNRLLLVFLPYFVFIMYAI NRGTSFTQVLFMNCDHSMLTFAFYKKPEFILRLFCIRLREIIKVNLLPAAVIGTGFALML YVSGGTDNALNYIVLFVSILALSVFFSVHYLTCYYLLQPYNVNTELKSATYRIVMSGTYI VCFLFMKLRMDTFVFGIVTTVFCILYSIIASLLVYRFAPRTFRLRN >gi|224461044|gb|GG657760.1| GENE 305 317986 - 318738 720 250 aa, chain - ## HITS:1 COG:MA1106 KEGG:ns NR:ns ## COG: MA1106 COG1131 # Protein_GI_number: 20089975 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 17 250 1 235 235 300 66.0 2e-81 MLYKAGTVCANHKENRMEFIIEHLTKSFGTKEVLKDISFTFESGKIYGLLGRNGAGKTTL FNCVNKDIKAEDGSFYLNDGNKAQIRPEDIGYVLSAPTVPAFLTGREFIKFFIEINESSI PDLRPIDEYFDMMNIEPGDRNRLLKDYSHGMKNKMQMLVNIIARPPLLLLDEPLTSLDVV VAEEMKELLRSLKKDRIIIFSTHIMELALDLCDEIVILNHGELEVVDKYDLDNSGFKDKI IRALKEEEDD >gi|224461044|gb|GG657760.1| GENE 306 318759 - 319115 611 118 aa, chain - ## HITS:1 COG:VCA1051 KEGG:ns NR:ns ## COG: VCA1051 COG3304 # Protein_GI_number: 15601802 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Vibrio cholerae # 4 118 5 129 143 87 43.0 4e-18 MGCLGNVLWFVFGGAVSGLSWCLAGLLWCVTIVGIPVGMQCFKFASLSFFPFGKEVRYGG GAGSLLLNIIWLIISGVPLALEHALFGLLLCVTVIGIPFGMQHFKLAKLALMPFGAEV >gi|224461044|gb|GG657760.1| GENE 307 319227 - 319487 176 86 aa, chain - ## HITS:1 COG:no KEGG:CLJU_c17650 NR:ns ## KEGG: CLJU_c17650 # Name: not_defined # Def: hypothetical protein # Organism: C.ljungdahlii # Pathway: not_defined # 1 85 1 85 85 99 65.0 5e-20 MYESRCGICCSDCERKEEVSCSGCTNMEKPFWGGDCKVKSCCEGKGINHCGECEQFPCEM EANMGKDAGFDPAPRLESCRRWRGEA >gi|224461044|gb|GG657760.1| GENE 308 319655 - 321433 205 592 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 342 568 10 232 312 83 28 1e-14 MRRLLKYLKEHPLATVLAPLFKMLEASFELFVPLVVARMIDTGIRQQMTGYLWQMGGVLV LLGVVGFGFSVTAQYFAAKSAVSAGMAMRNDLFAHINTLSYKEIDAVGASTLINRMTNDV NQVQNGINMFLRLFLRSPFVVFGAMIMAFTVDVKAALPFAVAIPLLLLVVFAILLVSMPL YRKVQKQVDKVLLSTRENLLGIRVVRAFNHQDSEMKHFREQSTALFHRQIHVGKISALLN PLTYVIINLGVIAILWTGGRQVSLGTLTQGQVIALINYMSQILAELIKLANLIILLSKSM ASLNRVNQVFDMQPSIDSTGLPLSQKKNAFSGNTVELKSVIPAVQFDNVSFCYTDSGKET LSGVSFSAMPGQTIGVIGGTGSGKTSLISLIPRFYDVSKGAVLVNGQDVRTLNPVSLRSR VGLVPQRAQLFKGTLRENIRWGKPDASDEDIYQALDTAQAREFVDAREKGLELMIEQEGG NLSGGQKQRLTIARALVRRPEILILDDSASALDFATDARLRQAIRETTGQMTVFIVSQRV SAIRNADMIIVLDDGEMAGYGTHGELLRSSPVYKEICESQTSGQEETQYANA >gi|224461044|gb|GG657760.1| GENE 309 321420 - 323192 184 590 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 361 572 32 249 329 75 26 3e-12 MQMHKNRPKNEKHSRTVMIRILTCIRPHTALVALSLLLSVITVVLTLYIPILTGHGVDQI IGKENVDFKELSAVIITILACIAVTSVCQWFMNHINNKITYRVVKDLRICAFNRLQVLPL SYVDSHSSGDLISRVITDIDQFSDGLLLGFTQLFTGVITIVGTILFMLSINPYITLVVVV LSPLSFLIANFISKRTFAMFKKQSEARGELTGFTNEMLGGIKVVQAFGHQDEAQEQFEEI NRRLSGYSMRATFFSSITNPATRFMYSVIYAGVAIAGCFAVVRGMLTVGQLSSFLSYTSQ YTKPFNDITGVITEFQNSLASAARVFELIDQPSIAEDKAGAVRLQNPEGHVTMEHVSFSY VPEVPLIENLNLEAGCGQRIAIVGPTGCGKTTLINLLMRFYDVNSGIITVDGQNITDITR HSLRAAYGMVLQETWLKAASIRDNIAYGRPNASEDDIIRAAKEAHAHSFIMRMPDGYDTV IAEGGSNLSQGQKQLLCIARVMLCLPPMLILDEATSSIDTMTEIRIQKAFEKMMEGRTSF VVAHRLSTIKSADMILVMDKGHIIEQGVHEELLKKGGFYARLYNSQFSAV >gi|224461044|gb|GG657760.1| GENE 310 323216 - 326569 2620 1117 aa, chain - ## HITS:1 COG:sll1871_2 KEGG:ns NR:ns ## COG: sll1871_2 COG0642 # Protein_GI_number: 16330815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Synechocystis # 578 831 81 333 344 181 44.0 6e-45 MKTEGSRGTKRKIALAAVCVGAVLCVLTFLFIEAVKQQLWEQSVETIMESTQQGCTTLRV QLQDDIDSIRNIADYVSGYTMEQKEDIRHTVQSYAGIEGGVSLYLEEGGDIQSDVPADST AAEALRESDKEEGVINPHISSVTGVNVFDVFVKVTLKDGTEGYFLKEYEVESIVDSFSLS FYNNAGFSYVINAEGEVLIRSPHHNSNKTMKNLFDMLSGPDNNADSLKEFAGALEGSNTG WALFDYMGEETVFCYSPLKLESDWFLVSIIPEKVVNSQTNDIILRSMILIASIIIGILAL VIFYLRYANKTNRRLRNQAEYIGHLYNAIPEGIALISADAPYRLLQLNEEGLNILSYPHD AMSGVLENVQFEELFHPEESKMLRQMFADVTGNDEKHTFESQMKKSDGSFIWTAGIIERT LDEEGIPVLIAAFHDITAEKQKEVEAERVQLQERVTLVGAISNAYPVIVSVNLTRDLLSF IYVKQGLLLHLGEETTYSELFSDITASVHPDHVDEYRRRFAPDRIKEILGSTKQEVFLEM RQKLSDGNYHWTSTQIIYVDNPYSEDKLAILISRRVDEQRYEEEQQRQALQTALDNARAA NEAKSKFLSNMSHDIRTPMNAIVGMTEVAKAHLGEQDRVRECLDKISRSGSHLLGLINDV LDMSRIESGKMSLSAEPFNLAEMVTEAAELVRPQAENKQIHIDIHLYGLKNEKVIGDELR LRQVGVNILSNAVKYTPEGGSVEVEVRQAKSSRKGYQSFIFRCADTGIGMTQEFLEKLFL PFERAKDSTDSKVVGTGLGMAITKNIIDLMNGDIQVESEPGAGSVFTVTVPLKLQEEVQG EGPKEWKDARCLILDDDRHSCRNAANILSELGLDVQYVCEAEYTFERVRELCSENVRLIF FGWDAPSESRCDIVRRLRPELAEDVPIAALGGRRSKEMEADAVSAGVSIFLYRPCYRSKM AGLLERLSGEEKREEQSEILPDYSGKRLLLVEDNAINREIARELIGETGVQIEEACDGKE AVRKVAESEEGYYDLILMDIQMPEMDGYEATRAIRALVRKDVCDMPIIAMTANAFDEDVR MALRAGMNAHFSKPIDIRTLRHMLYEYLSRRRKDGPE >gi|224461044|gb|GG657760.1| GENE 311 326569 - 327846 1171 425 aa, chain - ## HITS:1 COG:SP1897 KEGG:ns NR:ns ## COG: SP1897 COG1653 # Protein_GI_number: 15901724 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 31 367 25 353 419 89 25.0 9e-18 MKQRIMMGMCAVLLVCSLILSGCNEKNKVVNYKKADENTVDITFFGNKYEPDNVTVIEEI ISGFMEEHPDIRVSYESLKGEDYYTALEKRMAAGKGDDVFMVNHDAALELSEAGKLADLS GMKTISGYTDKMISQMDEDGKIYWVPTTVSVFGLYCNMDLLEEHGQKAPENLKEWREVLD YYRDRGLTPVIANNDISLKTLAIGKGFYSVYQEGRQGDVFSSLNEGGGKISTYLSDGFSL VEEFIQKGYVDAEIALGTEKTSDDLEQFIKGEAPFMLTGAWAAGRVDKMEPDFEFQVVPY PVLEDSSLVVINPDTRLSVNADSGHKDAALKFVEYFTGADNIQKFSDQQASFSPLREGSP SSVEEIQPLVSCYRSDRTVIGADGMLKLPIWKLTAQASVKLLSGETLDSVMDWLDMQADE EGSTQ >gi|224461044|gb|GG657760.1| GENE 312 327931 - 329211 789 426 aa, chain - ## HITS:1 COG:VCA0681 KEGG:ns NR:ns ## COG: VCA0681 COG2206 # Protein_GI_number: 15601438 # Func_class: T Signal transduction mechanisms # Function: HD-GYP domain # Organism: Vibrio cholerae # 27 408 28 425 431 162 27.0 1e-39 MSAFEAAKYMFQYNTSFIDNRAMIGLLRRAYNHVDIRLMDHGIRVAYIVSRLLRQRTEAN SARVRNICFLSALHDVGAYKTEEIDRIVQFETEDIRRHSVYGYLFVKNFTPLSELAHAVL HHHTPWNVLKELDDISEENKSIAQLIYIADRLDIWLNMEGRPYSEFLSVISAGRGSRYKP ELADLMMRERFSAFSAEEAECDPVFNRMQSEITFTHEEVRSYLGMVIFSIDFRSRHTVTH TMTTASISNELAQYLGVGPEERNQIIVGAMLHDIGKIGIPAEILEYPGRLAPRDMEIMRS HVDITEEILGRDIPKPIRRIALRHHEKLDGSGYPHGLTAEDLTTGERIVALADIVSALAG TRSYKGAYSKEQIITIISRMRDNGLIDAGLVNCMITHYDTIMSRTLAQCQPVMDIYENLQ AEYSLL >gi|224461044|gb|GG657760.1| GENE 313 329247 - 331961 1876 904 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 481 894 337 754 776 188 30.0 4e-47 MKKHSRRSILFFAGAVLLILAATAVLGFFLRGEMIKIRQREAENILYYYNEKIVLQLQGT MNEADALAKTALVEGTGETEWFERASDTLLSREEVRFVCLFDGDTVVSAQPEEKYAELAG RDLQDFSYAYTLAKVVKELVVEGPVALDIDQEQQKVFLFLQPVVGGESYLGEVAVALDRE YVLEQLKLDDLPDRGYDYELWRVEPQNGAKEVIAKNKDDIDFSYAEKTTFYLPSQWNLSI QPSSGWLSPSQQIWIIIASVVAACVLLALAWLGYLHYYRRHAIKQLRTMDGATGLYNQKG FTAALDCWLSDESSPVMLFYFSMEGYSQAARLIGTKQEAVFLRSIPGRLKEYIRSPFLAA YLGSGNFLIALREGMNKLQQEEFAKGLSLELLLKVRVRDEKNFVMARYKYTRCKNGTGRA AEEMESLIHAYYAEVMQESPVRMMTEKCRQLIEGNNDVIFDEYTDFEMTELSKTFNRYRK KVEQLAYFDPVFNVGNRPKYFRDTEMLISYSPKRPFSLFCVDICSFSQYNELFSADVGDE ILHEMIRRLSRPFGSYLYRINGDVFLGISLTKEKTDVFAARLQQMLTAPVMAGNLSIPLQ IRLVACRYPAHGSTPGILLERLQSAMSFSKTTARSTVIYNDALDEMLRTEAHILHRLSDA IQQKTLEIWYQPLMHLESGQYKAVEALVRLPDGEGGYFPAGQVISLAERNAMVEALGDYV LANACSFMREWGEELGVQRMGINLSVQQLLVGNSAEHLLQLISAANVEPGRITLEITESI LIQSIDHAAETLEKLRKAGIHIALDDFGVGYSSLNYLSNLPVDIIKIDRSLTQQILTNEK QYALLRSIVDMSVINDLSVVAEGVESGAEQKMIASAGVQYIQGYYYARPMPGEELIVSLK GRQG >gi|224461044|gb|GG657760.1| GENE 314 331970 - 333571 1448 533 aa, chain - ## HITS:1 COG:aq_035_2 KEGG:ns NR:ns ## COG: aq_035_2 COG2199 # Protein_GI_number: 15605636 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 340 525 59 239 251 95 34.0 2e-19 MDKVPRNSLKGEPVINMRRKDKKKKGDQWGISFSPIIRYSLVFCILVVAIIFLGGGVLSV SRMKSDAEASLHSSQAQISQRVNEAIQLLESLAGFPDYYDPGLPAIDKVKRLDQMSPYFG FMMLCYVDENIIVYSDGDEPASLASRDYMQRLFSTGQRQVTDSFAAGADGTTLNYTVAVP LIDRQGSITGALFSAIYFDEAVQILEESAGNLDADATLIGTRGQIMSSTAGLPYGDSVMD VLRDDILFGTTSDELEELLLAAHPGDYWSIQNGSLCYTTYQRVDNTNWDILCTVSFGSAF SQILPSLAMVALLTAFACVVLMMFVRNYIAKQMLVVDMLVHSMEELEKRIYQNESPENVD FKEILRLTGEGLSDSLTGVVTRSVFLNKAEAQLKNADRNMVQALFFVDMDNLKYINDTCG HEGGDIALKSIGYILREYEKKYDGVVGRYGGDEFLMLLTGLDDRKELNDVLDGLVLRFQS KIQSGDRNIPVQCSIGVSIYEPGMDLERMVLDADEALYHVKQNGKGYYHIHQN >gi|224461044|gb|GG657760.1| GENE 315 333823 - 334056 344 77 aa, chain - ## HITS:1 COG:no KEGG:CD1741 NR:ns ## KEGG: CD1741 # Name: grdF # Def: sarcosine reductase complex component B subunit alpha (EC:1.21.4.3) # Organism: C.difficile # Pathway: not_defined # 1 76 359 434 434 115 78.0 6e-25 MVKEIERAGIPVVHIATVVPISLTIGANRIVPAVGIPYPLGDPNLGEEKSRKIRRELVER ALGALMTPVEEQTVFEK >gi|224461044|gb|GG657760.1| GENE 316 334084 - 335133 1356 349 aa, chain - ## HITS:1 COG:no KEGG:CD1741 NR:ns ## KEGG: CD1741 # Name: grdF # Def: sarcosine reductase complex component B subunit alpha (EC:1.21.4.3) # Organism: C.difficile # Pathway: not_defined # 1 349 1 349 434 448 67.0 1e-124 MSKIKIVHYINNFFAGAGGEEAAGMAPELREGAVGPGLALMQAFGEEYEIAATVVCGDNY FGEHLEEAKEEILRMIEPYGPDLFIAGPAFNAGRYGVACGTMALAAEERFGIPVLTGMYE ENPGADMFRKDLIIVRTKNSAAGMRQAVPVMKAIAEKLVKGEELLGPSEEGYLERGIRVN YFHEKRGSERAVDLLVKKMNGEDCPTEYPMPVFDRVPPLPPVEDVSKIKIAVVTSGGIVP QGNPDHIESSSATKYGIYSIKGMDHMDKADFMTIHGGYDRAFVTEDPDLVVPLDVLREME KEGGIGELADYFITTTGTGTSTGNAKGFGKDFVKKLLDDNIGAVILTST >gi|224461044|gb|GG657760.1| GENE 317 335151 - 336437 1532 428 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1637 NR:ns ## KEGG: CDR20291_1637 # Name: grdG # Def: sarcosine reductase complex component B subunit alpha # Organism: C.difficile_R20291 # Pathway: not_defined # 1 428 1 428 428 686 74.0 0 MKLELGKIFIHDVQFAERTYVENGTLYVCRQEIISLVLEDDRLVSADVDLAKPGESVRIA PVKDVIEPRVKVEGDGGLFPGIINKVRQVGAGRTHALVGAAVVTSGRIVGFQEGIIDMSG EAAKYTPFSRTNNVCVIFRAKEGIDAHEHETAGRLAGLKVAAYIGEAARELTPDEIVTYE TKPYLEQIAEYPDLPKVGYIHMLQSQGLLHDTYYYGVDAKKFIPTFMYPTEIMDGAIVSG NCVAPCDKVTTFHHLNNPVIEDLYKQHGKDLNFIGVILTNENVFLADKERCSDMVGKLVE FLGLDGVIITEEGYGNPDTDLMMNCRKATAAGAKVVLITDEFPGRDGKSQSLADAVPEAD TVVSCGQGNLIIHFPPMDKVIGTLEFVETMIGGYEGSLKPDGSIDAELQIIIASTIANGY NHLAARTY >gi|224461044|gb|GG657760.1| GENE 318 336583 - 337974 1456 463 aa, chain - ## HITS:1 COG:AGc4328 KEGG:ns NR:ns ## COG: AGc4328 COG0044 # Protein_GI_number: 15889657 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 453 25 477 506 342 42.0 9e-94 MRTLIRNGTVVTSVNEYEADIYIEDGIIKEIGKNISRDAEEIIHAEGKLIFPGGVDEHVH YGSFGGRLFETTDAAAAGGTTTIVDFAPQEKGVPLIDAIKKQAAKAQGTACVDFAFHGII MDPKESVFEEIAQLPEVGVSTLKLFMAYKGTDFYSDDESILKAMMKARECGVTMMVHAEN ADIINVLQKKYLAEGHTEPVYHYYSRPPVAEEEATKRAIALARTADCPLYVVHVSVKEAM EAIREAYTQGYPVFGETCTHYLTLTTEYLAKPDFEGAKYVCAPPLRPQKHVDALWEAVQK GWLQAVGSDHCALEGGFETKKRGLGDFTKIPNGCPGVQDRLAMLWTEGVCKGRITRQKFI ELFATMPAKVVGLYPQKGEIAAGSDADLVIFDPDYEGVIRNEDSLHGIDYSPFEGFPVKG RPEQVYLRGKKIAENGRFIGPKGEGKWQKCRPYAMCYDYFSLN >gi|224461044|gb|GG657760.1| GENE 319 338034 - 338771 846 245 aa, chain - ## HITS:1 COG:TVN0771 KEGG:ns NR:ns ## COG: TVN0771 COG1335 # Protein_GI_number: 13541602 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Thermoplasma volcanium # 76 224 31 171 175 63 32.0 3e-10 MAENKEYKFVDHYEFDEELLKRAFAEARKIYKERGFMRKMGFGKAPAITTVDMAKAWMSE GHVFTCDHSEEVCAEALKVLEAGRRSGVPIFHTTTGYIGEKQWDLPRWDEKIPMSALDIN DDWLQIDPKLKPQPEEPVIHKKYASNFFGTHLAQTLNFLGVDTLIVMGATSCACVRHTVM DSTGYGFKTIVPEGTVGDRVPGVIEWNLFDMEAKFCDVVPVDEVVQYLEGIDASVYRKHE RLYDK >gi|224461044|gb|GG657760.1| GENE 320 339030 - 340541 1133 503 aa, chain + ## HITS:1 COG:no KEGG:ELI_0263 NR:ns ## KEGG: ELI_0263 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 4 445 3 435 497 112 23.0 4e-23 MRTKRLSPLGFLMECLNIQTVSLSRELHVDASLVSKWKSGDRSLNSNSMYFEDIIRFIMK VSEKSDHQLLSKALSEIYPLEGLEGSSSPEPFVRKLLFSEKLTLPNLKEFTAPGIQPKIQ IGSCEQNSGRRHAVLKLLDYAETLPVPGRIIFIDSEEYGWLLEDEAFVRHFAEKMNVLLG RGFSARFVIHFSSYRQRFVRFFEMCNLLLFHRNVEWFYYEYYDENVFQFSQFILDKAISL LGISAGQDNSTTMVFTDTPSIIRHWTMAESVISRCEKLFVNFPVEKCADVVEYIRVIRKR GTLYAYLPAPAFVSAQSELLSEILTGNHIDPATTDQCLIVNQRMRDIVHTQFRGLEDAPE RIVQILQLEEMERRAFRTPFISCSLTLLGGRQVNVTKPQYARCLRSLADALDKHENLEIV FLSEGDNAPLPAIPEMNCWCKQNTWMVQMDQKGFRLSDEASIVNAASVTFERCIRRIPPK RKEKSSVTAYLLQLADTLERSGV >gi|224461044|gb|GG657760.1| GENE 321 340658 - 341515 583 285 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 3 281 6 278 290 193 39.0 3e-49 MTKKIAIINDLSGFGRCSLTAAISVTAAMGVQPCPLPTAILSAQTGYPSYFCDDYTDKME AFRSEWKKMNVRFDGIYTGFVASEMQIRHIHRFIDTFCGEDTFLLVDPVMGDNGNTYAMF TEQLRCQMRELALRADIITPNLTELCLLTGTDYHTLADIKDTGHLTETIDRAGKELCKEG PGEIIVTGIRHKSENGTDMMGNLYITKEFCKLSSFPYIGGSYSGTGDLFASCLAAGIARG DSIPDIMETAGAFLELALADSVKEQVPRNDGVNYEKFLPMLLKGA >gi|224461044|gb|GG657760.1| GENE 322 341678 - 341887 306 69 aa, chain - ## HITS:1 COG:L172505 KEGG:ns NR:ns ## COG: L172505 COG1278 # Protein_GI_number: 15672150 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Lactococcus lactis # 1 56 1 56 65 77 69.0 7e-15 MNSGTVKWFNSQKGFGFITDDQGGDVFVHFSAIVSNGFKTLEEGQKVTFDTETDPKDSSK LKAVNVCAA >gi|224461044|gb|GG657760.1| GENE 323 342160 - 342696 444 178 aa, chain + ## HITS:1 COG:no KEGG:bpr_I1014 NR:ns ## KEGG: bpr_I1014 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 14 170 11 167 170 157 53.0 3e-37 MKQNMQQGKAIPLLTAAGLFAAMITLMTAYIFHIPYGTNGGYIHFGDTFIYIAAVLLPRP YALAAAAIGGGLADMLTAPMWAPATIIIKMLITLPFTSHNGRMLSPRNVAAPFIAALISA AGYYLAEGILFGSFLSPIASLTGSAVQSGGSAVIFLAAAAALDRIHMKNRADQLLFLQ >gi|224461044|gb|GG657760.1| GENE 324 342726 - 343322 721 198 aa, chain + ## HITS:1 COG:aq_2060_2 KEGG:ns NR:ns ## COG: aq_2060_2 COG0535 # Protein_GI_number: 15607030 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Aquifex aeolicus # 6 197 2 190 194 134 39.0 8e-32 MADILYTYKNQVYANITNKCDCRCTFCIRSHEDSVGDAKTLWHKTDPSLEEVIAAMDAFD FTGYDELVYCGYGEPTCALETLTASAKYAKEKYGVRIRVNTNGLANLYYGRDIIPALAGI VDSVSISLNAPTSEEYDKVTRPRFTGAFDALLQFASECKDYIPDVRLTIVDVLPQDKIEA SQALADSLGITLRIRKYA >gi|224461044|gb|GG657760.1| GENE 325 343447 - 344097 454 216 aa, chain + ## HITS:1 COG:CAC0652 KEGG:ns NR:ns ## COG: CAC0652 COG4767 # Protein_GI_number: 15893940 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Clostridium acetobutylicum # 63 179 48 163 196 82 41.0 6e-16 MTQTTIQLSFFEAILDLLMPGPLYAASLILIGILLFFFFRKDKGLPRFRTAFGSLLLYYY LGIVFRNVVGIPTIKEFIRLDSLGESIFNPIVNWIPFADGISFDFILNILCFIPFGFLCP LISGTYKQLKKVIFLGFLLSLLIEVSQMFTLYRATDINDLITNVLGTAAGYLCFRLVVKL RNAITGKAYTASAANDSALFLPPLVTLLAFIIVFIT >gi|224461044|gb|GG657760.1| GENE 326 344230 - 345729 781 499 aa, chain + ## HITS:1 COG:no KEGG:Closa_4135 NR:ns ## KEGG: Closa_4135 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 22 498 30 540 544 114 25.0 1e-23 MEIQSIPFPGKEPADDKTASLADIASHISTWKPEAEMEFVENAEASYHKTAERNDTSEIS DESKADTSKEAEAVRRIEQLLAKLRIWQPLLSSDSEKELERLKELYMTILKQIVSLTEHD EQKRLLSLLDSYTFGNLAKLVEKHFSTLDGFLHQYGEHWNRTSLFNSLFRSATGRSLPPE TVGRLLDEANSAWNGKENYKEIIHTKNVHEGILYSRHLSEKAVPYSKAFSGRKLVEADYL SGTFPEYGKVTDANKLVTHSSPRQNIFFQVQDLQAAETFLTHFLGEGNLLSNTQITAWNP QLRGFLAADTWLKSIVYLQASGIQKTLAGSISRAIDRMMLFYINSAAAQKCTAASSYISH DSASDKENREPAVFDIYCRLRMLCQKEPNAGKALTSILKYAYSQYENQDRKEGFFFAHPD PSKSDCKKGFLLLKKDWRQFVDGLPVSMRRKRELEASFMSPWGDYVSPLNPLYNPEAAHP AIIGGLVTAAVVIVFCLFT >gi|224461044|gb|GG657760.1| GENE 327 345739 - 349578 2815 1279 aa, chain - ## HITS:1 COG:PA4367_3 KEGG:ns NR:ns ## COG: PA4367_3 COG2200 # Protein_GI_number: 15599563 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Pseudomonas aeruginosa # 1026 1272 1 250 267 166 35.0 3e-40 MNEYDTILSDEYIEQLKDMVEYFPLACYFLKRDTELTILYGNAAFYSMLQQSRDDVRYKY KNSLSSLLSTEKFFEGYQEDIKSREFLHDAEVHNRKHRFYTRMKLSEADGIYCCMSLDVS DFVLDKTKNEDMLQLLHILFTQIRQEAFVVDVKNQIVYMASQKKILSGFPKVLTFSAYSS EYAEKVLPLSKADDDKLQHAFHKTLKQHVRTINEVRLTSGEWVRFQFSSYEKIEDKGPVI LGFIEDISREKQEYLTYLKETQFYHMLLSEKKAYGHINITQDQFYGMGGIWNLYNELTEE MTYTQLYTRFIHKVVHPEDRGGYMELMDRDNLRQSYQNGLTRLKYEFRRIIEQNKMMWME IEILLFKEPLQNELMALMYLTDIDERKKSSFQLRYESEFDQLTDVYNKKSAESKIIQCLR EPAELRAFLILDLDNFKDINDSYGHKAGDDTLILFADHLKAVFHEHCVVGRFGGDEFLVL MEQITSDKEVDDALMDLYQKLQEDKRYDIKFSAGITLIKGSSDYETVFEQADKTLYEVKN SQKGLYQYYNREVKPKLDIKELQSMTAAEGAEAGYENLELLEKKDFDTYLGEFGDISYLV DPDSYALLLGNQAFYDRVGLTKSQCRDKKCYEIMHRRKTPCPFCAKANWSKDKFYLWKDM NTALEQEFLIKNKLITWKQQVVLLAIAVDISNDKSIVDSMESNATESHFLLSGIQHMQER VSFDEAMQSILETICHFFKAYHAGIWMMDEQSGLYALNSEWFVGDSGDQWTLSEEEVAVL SAWLSAQKWNEPVKLENPQAMIGESFDMYQLMQSHHVENQHWIHLEEHGEEYGCLVIDNT NANFQNVSFLESLSGFIVNEIKRHRLFQAALHANHYDLLTDVLNRNSYENNLPRYQTEEV SSLGVIVANIDNLKKINEDYGTVTGDQYIRHLANLMKMIFAQTDIYRFNGDEFLIIAVNS EKAVLEDKVQKLREKIEKNENFSVSLGFSWDSVEHDLAALIHAADDVMKLNKKRHYDEMH GSDDAQHRQLLRNLIKQIQRGEYVVYLQPKYHLENHKWIGAEALIRQQHPEFGILPPSEF IPVLESNGIIRYIDLFVLEEVCRLLEKWNRNDLIISLNFSRVTLMEDDIINSMKKVLDKY DFSRRCLEIEMTESTVEHCSAMLYKTVQEISDLGLRISLDDFGIRYSNLSVLNDIHFDTL KLDKSLIQTLVSHQRSRIILRNVIQMCRELDIEMIAEGVETSRQEDILKSLDCPNGQGYL FARPVPVKDFEEDYILDRA >gi|224461044|gb|GG657760.1| GENE 328 350266 - 351108 516 280 aa, chain - ## HITS:1 COG:no KEGG:HS_1632 NR:ns ## KEGG: HS_1632 # Name: not_defined # Def: large adhesin # Organism: H.somnus # Pathway: not_defined # 31 141 1473 1586 2914 98 50.0 3e-19 MEENANFIPEIYIGDNGNWFINGYDTGVKARGDDGITPHIGTNGNWYIGDMDTQVPATGP KGDKGDKGETGPMGPQGLTGATGPQGLTGPQGLTGPQGPTGATGPQGATGPKGDTGAAGA QGPQGIQGPKGDKGEQGPVGPVNIANNLETTEEGYALDARQGMILYHNSIVEAGSNDNGS YRKYADGTLEMWGVKEADYLSKTAAGTCYISEEIPVTFPVPSITRAVIVAQKVTARQESS WVGINADKAMTGFNVFVITSFSLTSVRRAYIHWHAEGTWK >gi|224461044|gb|GG657760.1| GENE 329 351431 - 351892 232 153 aa, chain - ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 87 1 87 107 67 39.0 1e-11 MEFAEKILTLRKSNDLTQEELAEKLNVSRQSVSKWESGQAVPELEKIVALSSVFNVTTDY LLKPAEIDELSVKTNILEKQQQQILLREKQRNKIVRCVMYAVGVYLLFFAVAFIGHYIAF DFGFGNPSIIFSEFLIATAIVIFICVRSIRKED >gi|224461044|gb|GG657760.1| GENE 330 352091 - 352879 354 262 aa, chain - ## HITS:1 COG:BH1295_1 KEGG:ns NR:ns ## COG: BH1295_1 COG3409 # Protein_GI_number: 15613858 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Bacillus halodurans # 201 259 12 70 459 59 47.0 5e-09 MNIKETNLSFGSMSRRSATKLIILHHAEASNCTVQDIHRWHKNNGWAGIGYHFLVRKDGS IYRGRPEWAVGAHASGSNSDSIGICFEGAYMTETMPAAQKAAGKELVAELKKKYGISKVQ AHRDVCATSCPGTKFPFSDIAGAAGSAATTTPTPAKPTEKGDAWVSRLQAECNAQGFSYQ TVDGLTGPNTLAGCPQLGRTSRGNITALLQERLNALGYNCGVVDGINGTKTQAAIKAYQR AHGLVADGIVGVKTWSNLLGLS >gi|224461044|gb|GG657760.1| GENE 331 352936 - 353766 256 276 aa, chain - ## HITS:1 COG:no KEGG:BCE_1581 NR:ns ## KEGG: BCE_1581 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 57 138 193 274 585 90 64.0 5e-17 MEENASFIPEIYIGENGNWFINNYDTGVKARGDDGITPHISANGNWYIGDIDTGVSATGP KGDKGDAGPIGLQGPTGATGPQGLTGPQGLTGPQGPTGATGPQGATGPKGDTGAVGPQGP QGIQGPKGDKGDQGPAGPVNIANNLETTEEGYALDARQGKILSDNLGIGGITESGDGYVR YKDGTQLCWISKSAIYNYSVAYGSVYHTGTQYFKFAKAFVGKPSITASAGSAGLTYVASI RSSGDLQTVGLKFCNPVSTSELLTDISIIAVGRWKL >gi|224461044|gb|GG657760.1| GENE 332 353888 - 353983 58 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTASYATGQDVALEVFTAVVYGILVAGVST >gi|224461044|gb|GG657760.1| GENE 333 354156 - 354335 96 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571097|ref|ZP_03780114.1| ## NR: gi|225571097|ref|ZP_03780114.1| hypothetical protein CLOHYLEM_07197 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07197 [Clostridium hylemonae DSM 15053] # 1 59 1 59 59 94 100.0 3e-18 MKQLEEYNELNYKRLKALGEMQKQQLKCLSAMLNHQITRNVIDNIKRIHDDWLESIFDK >gi|224461044|gb|GG657760.1| GENE 334 354969 - 355181 103 70 aa, chain - ## HITS:1 COG:no KEGG:Closa_2512 NR:ns ## KEGG: Closa_2512 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.saccharolyticum # Pathway: not_defined # 1 66 1 66 92 66 50.0 3e-10 MIKYDKLWETMKSKEITQYDLYTKHHMNRSQLNRLRHNRNVEVNTIDKLCNILNCKVEDI MTHYPDDNVF >gi|224461044|gb|GG657760.1| GENE 335 355476 - 356264 0 262 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571101|ref|ZP_03780118.1| ## NR: gi|225571101|ref|ZP_03780118.1| hypothetical protein CLOHYLEM_07201 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07201 [Clostridium hylemonae DSM 15053] # 1 262 1 262 262 464 100.0 1e-129 MSMFMIGILFIMLLPLAIIKMLIDHKVTLLLGVMTIIGFALIILSFYKLAKKSYEKVNYG FIWGGFVLYTIASLIVPLSLYELQNLKKPDIFGTIKNGEAWKIGITLFISFLMFLIALYS VRLCKHQFIQTIIILIPVIILIVAFSYSAINCTRSNSEYIVQDMNSKDTLVQYTLKKEAK IYYTGYREGKNTIYCFPLLSPIKYSCDSFQEGETVYVDIDSWKGIYENNITTFDKDNPLK GRKYVKVSNGSKAGFVKTSALQ >gi|224461044|gb|GG657760.1| GENE 336 357845 - 358036 277 63 aa, chain - ## HITS:1 COG:L126409 KEGG:ns NR:ns ## COG: L126409 COG1476 # Protein_GI_number: 15672309 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 63 1 63 97 66 60.0 9e-12 MKNNIKQLRKSRGLRQEDLAARSGVSRQTIIAIENDKYNPTLELAMKLARLLDTTVEELF ILQ >gi|224461044|gb|GG657760.1| GENE 337 358036 - 358407 243 123 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571104|ref|ZP_03780121.1| ## NR: gi|225571104|ref|ZP_03780121.1| hypothetical protein CLOHYLEM_07210 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07210 [Clostridium hylemonae DSM 15053] # 1 123 1 123 123 214 100.0 2e-54 MKKLFRRAELRRMDEMERSIILKGQRNALVYVTVVLGVWSFYEIYKLYVQKTSASFMPLI LLCTTFTVETCSQLYYQKEAVKGEEEYHELSFSRTLLTIIFMGIVTAAVLTGIIIAVYVR WEH >gi|224461044|gb|GG657760.1| GENE 338 358533 - 359039 356 168 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229871072|ref|ZP_04490663.1| acetyltransferase, ribosomal protein N-acetylase [Spirosoma linguale DSM 74] # 3 164 8 167 173 141 40 4e-32 MECAIRCWRMEDAADVSRMLNNKKVQDNLRDGMPYPYTEKDGKEFIASMLAADPEETIAF AITADDRAVGSIGVFRCGNIHFRTAEMGYYIGEPFWGKGLGTSAVRKTCDYVFEHTNIIR IFAEPFSYNTASCRVLEKAGFQFEGLLRKNAVKNGKIVDMKMYSRIND >gi|224461044|gb|GG657760.1| GENE 339 359185 - 359757 433 190 aa, chain - ## HITS:1 COG:CAC0018 KEGG:ns NR:ns ## COG: CAC0018 COG2249 # Protein_GI_number: 15893316 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Clostridium acetobutylicum # 1 183 1 187 200 82 28.0 3e-16 MKTTIVYAHPWDGSFNRAVLEEAEKAAGDCYLIDLYKDRFDPVMSEEDLKLYGEGRTSDL LVKRYNEILDDTDRIIFIFPVWWYDMPAVMRGFLDKVMLKDSAYYSDDTGLHALRSIEDT YIFTTSSTSTDNLIHKFGDAINGTLIGATFEAVGFHNAVWKNLGGIDSLTEQERKEYLGQ ISEYLSGSDA >gi|224461044|gb|GG657760.1| GENE 340 359776 - 360315 621 179 aa, chain - ## HITS:1 COG:L89201 KEGG:ns NR:ns ## COG: L89201 COG3760 # Protein_GI_number: 15674012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 22 179 6 163 163 59 26.0 3e-09 MFYVSEIRTTEPGSFKSPLQKKVYQVLGELKVPYKRVDTDEAITMEDCVLINRRLDMDMV KTLFLCNKKKTLFYLFITTDNKPFDTKKFCEQLNIPRVSFAPKELFEEILETKIGAATVY SVLHDWDKTIQVIFDKDVADTEYYGCSDGTTTGYMKVKTEDILNKILPYSKHKYKIIDI >gi|224461044|gb|GG657760.1| GENE 341 360465 - 361346 577 293 aa, chain + ## HITS:1 COG:BH2117 KEGG:ns NR:ns ## COG: BH2117 COG0583 # Protein_GI_number: 15614680 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 3 292 1 288 290 172 35.0 5e-43 MDMNIQKYMAFIKTVEYGSFTKAAEILNYSQSGISRMINDLEKEWKVILLERRKTGVKLT SDGMKLLPFAKEVCRKYEMLQMQVDELNGLQSGFIRIGTFSSVATHWLPNIIHEFQKSYP HIEYELRLGNYSEIEEWLLEGSVDCGFLRLPVRSDLDTLPLEQDALLAVLPVSHPMADCD RFPISSFCREPFIMLERENNTEIADIFSRFSLKPQTRLITWDDYAVMSMVEKGLGISMLH QLILKRTPYNIIVKELDPPIYRDICFAVRNKKTASLAVKRFSEYLKYRQDSFI >gi|224461044|gb|GG657760.1| GENE 342 361339 - 362091 619 250 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571109|ref|ZP_03780126.1| ## NR: gi|225571109|ref|ZP_03780126.1| hypothetical protein CLOHYLEM_07215 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07215 [Clostridium hylemonae DSM 15053] # 1 250 30 279 279 513 100.0 1e-144 MDAAERKIYSVICSYEGIKAKEIGRYTGETRQTINRYLYGSPYIKELCYQDKEYRWHGLI RQNVPHYGIEDFCGYYSLAGEFLDIDFDEFIGRLKQGCRHIGRNLNDTRGLFHSFEDTYN TMQNLFGDFIADGLPNTIWREWEIIFELRIKRAKTIRIYADVILVTDEKVFSLEFKMKNE KTDEDIEQAAKYSEYLEVLFGPRYDVIPALVLTAGENILEDVELRHTTAVVPVCSGDRLC ELIKYYCSFR >gi|224461044|gb|GG657760.1| GENE 343 362214 - 363020 756 268 aa, chain + ## HITS:1 COG:MK0183 KEGG:ns NR:ns ## COG: MK0183 COG1402 # Protein_GI_number: 20093623 # Func_class: R General function prediction only # Function: Uncharacterized protein, putative amidase # Organism: Methanopyrus kandleri AV19 # 21 176 16 166 224 107 39.0 2e-23 MTNFIFENTWEENEEAIRTKKLAIIPVGSTEQHGPALPVGTDWIIAQYLAEMVGKRTDKG LVTPVIPFGHALYHADFPGTMAVSQTTLTAYVSEVCQQLISYGFTHFLFINGHGGNNNAL YDVGQQLRLQNIPAANIQWFEVAGDLDSKWGLIGHGDITETSVMMHIAPDTVKVERAHIP ENQKIGNIKLLDLHRGEFEGAGVYLNLRTRDVSKTGDLIEHGHSSGVDYSRSAADASAEL GREVCEAVVDYMLRFIDEFVEFQFEYQK >gi|224461044|gb|GG657760.1| GENE 344 363074 - 363463 214 129 aa, chain - ## HITS:1 COG:no KEGG:Desal_0749 NR:ns ## KEGG: Desal_0749 # Name: not_defined # Def: hypothetical protein # Organism: D.salexigens # Pathway: not_defined # 26 126 19 120 122 77 36.0 2e-13 MDGGAGKEMLKEELFNGYYIYCDVIRMGKDCTMAVYGGDSPHVGCAVMSAARPSLTGEGI GVTTSVLSAMGHKDDVIARMFAEAAAERWNCTVVCTCGIHVEDLTPEQLDIVREKCAGLL QRMLEQTDE >gi|224461044|gb|GG657760.1| GENE 345 363433 - 364008 510 191 aa, chain - ## HITS:1 COG:STM2921 KEGG:ns NR:ns ## COG: STM2921 COG0163 # Protein_GI_number: 16766227 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Salmonella typhimurium LT2 # 1 185 1 185 197 201 52.0 9e-52 MRIIAGVTGATGVIMSYYLLKALKSIEGCEVYLILSDGAKLTWELESSIPLEEMVELADH VYDERDLAAPVSSGSFVTDGMIVLPCSMKTLAGIASGYAENLIVRAADVCMKEGRKVVLV PREMPFGKIHIRNMKEASELGCVIVPPVLTFYNSPGTIEDMINHIVGKILLQFGISYDKF IPWTGEPEKKC >gi|224461044|gb|GG657760.1| GENE 346 364028 - 365497 1068 489 aa, chain - ## HITS:1 COG:PA0254 KEGG:ns NR:ns ## COG: PA0254 COG0043 # Protein_GI_number: 15595451 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Pseudomonas aeruginosa # 7 489 8 493 496 389 44.0 1e-108 MQPIKSFREYVEKLKEENEIVTVTQEVDWNLEMSAITRHAYDLPAPAPIFKNIKDCTPGF EVLGAPVGLSPDKEHPFKRVALSLGLPVDMSGPALVEAWSHLPDVEPIPPRLVETGACKE NKVFGEDIDLTKLPVPFIHYGDGGRYINTYGIFIARTPDGSWVNWAITRAMLDGPRTIAG VVIPTQDFGKIYAQWKEIGEEMPFALCLGVDPAIAMIAGYPLPSGVNEGEVIGGWYKEPV DVVKCETHDLLVPASSEIVIEGFASLEEMVPEGPMGEYGGYVWAGRSKPVPCFHVTAMTH RDNPVMPVCVAGVPTEENHTNWGMSIAASIQNVLRRQGFPIRECFIPMESAAHWFVVSVD RERKQEDDEQLAVDIGKAVFASKGGSYIPKVLVVDDDVDPGDIKQLVWALATRHHPDRRV VMEDQYIFPLVAYLSAEEKSEAISTRVIYNCLTPFHRWPQEQRPVEASFRGYPEELQKHV LDNWEKYGF >gi|224461044|gb|GG657760.1| GENE 347 368485 - 369402 965 305 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0053 NR:ns ## KEGG: Cphy_0053 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 142 300 71 224 233 112 38.0 2e-23 MNWILIATGVIFLICIVVGICRGAIKIAVSLAATLLTLLLVYFATPFVAQGITKYTPLDE MIEDQVISTMAGAAASQLADGDTGGLTEEDVRKALNAAGVTEDMLSQYGVTIQDIVDGKI KSSDLEKYGISGDLLKGLGGEKKKEVEDAINNADIPRDLQVAAIDKADLPELFKDMLTTN NNSDMYKELGVETFAQYVGHFLAKLIINIIAFLCTFILVTIIIRAIVFALDIISELPVLG AVNRLAGGAVGAAGALIIVWTLFVIITLLYTTDIGKQMFDMIESNSLLKMLYDYNPIMKL ATIFR >gi|224461044|gb|GG657760.1| GENE 348 369412 - 370665 1251 417 aa, chain - ## HITS:1 COG:no KEGG:bpr_I0229 NR:ns ## KEGG: bpr_I0229 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 43 415 32 406 407 219 29.0 2e-55 MLHRRNKNLRVVSESGDPTDAIIDQIMTELNSEDNPVENMEAQIKQHKIRFRRRIIIAGA AVVAAAVGIYLLIHLQTYTEARVSDTYTIKGAANNSYEEFADGVLKYSRDGVAYLNHKGE EEWNQPYQIKNPFIDVCQESAALADKGGNDIMVFKKDGLKGEIHTTLPIEKVSVSGQGIV SVILKNESSPKVICYDTAGNVLVEIKASLAGAGYPVDVALSEDGEVMLVSYLYTQDGKIT SKAVYYNFGEAGEEKADRQVASKEYEGTIMPSAFFMKGKTSAVVGDDRLVIYKGLDKPEE QVSVRIKKEIKSVFHNEKYIGMVLKNEGKEGYELRLYNAKGRQIMTKDFTGDYSEVKLSG SQVIMYDGKKCTIFLRTGVKKFDGELKSNIMEMFPIAGVNKYIVMNADGMEVVRLVK >gi|224461044|gb|GG657760.1| GENE 349 370717 - 371805 1160 362 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0051 NR:ns ## KEGG: Cphy_0051 # Name: not_defined # Def: peptidoglycan-binding LysM # Organism: C.phytofermentans # Pathway: not_defined # 4 362 25 436 436 174 31.0 7e-42 MEKQFPKNVRQIGNVSDEPKIYVEDYVDTYLSQLREKAAETAIGAALVGEIQSLEDQNVV YISGAIQMKELEVKGTEINIEEETWKQLEEDKKEYFPSKELVGWCLIETGHPMGLNSGVK KVHEASFSTENSIFIWKDALETDEIYYAYKYHELMQMGGHYIYYEKNPSMQNYMINTRKK IGVTPSEVVEDRAAKDFRSAVREKMEYKEQKGSSKFTYATSVLLVVVVLAIGISTVNNFD KMEAVQTSLESLSQSVNKPESKTGTVNENEGEDPDKNAAADDTKAEDTDAKDKEVSGGTV PETSTIQEQLGDEDYYVVQKGDTLDSISVKLYGNTSHVEAICKMNGLSDGNLIFIGQKLL LP >gi|224461044|gb|GG657760.1| GENE 350 371920 - 372393 362 157 aa, chain - ## HITS:1 COG:CAC1667 KEGG:ns NR:ns ## COG: CAC1667 COG1418 # Protein_GI_number: 15894944 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 14 152 20 155 173 126 43.0 2e-29 MIKKLHGLRRKWKDDFYDSIKDVARHPVVLRMKLYPHHGNTNCYQHCMNVAYYNYLWCRF FHLDAESAARAGMLHDLFLYDWHTHAARTGDKFHGLTHPDVSFRNASRLYKLNKVEKDII RNHMWPVTFFRFPRTKEGWVTTVTDKYCGACETSRRK >gi|224461044|gb|GG657760.1| GENE 351 372514 - 373689 588 391 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571137|ref|ZP_03780135.1| ## NR: gi|225571137|ref|ZP_03780135.1| hypothetical protein CLOHYLEM_07225 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07225 [Clostridium hylemonae DSM 15053] # 1 391 1 391 391 765 100.0 0 MYVYEQRKKQSKKTGLKFTDPVIQMNRDQFNEWCRIRQVPYNDERTPDENILDAIRRCMV RDRQLNTMGHDVSITVEALMQLLDGMEYGNDDDEGLDSVRGVYNLMKSRYSFASATYVII AASKLGIWPSPSAGEGESRPFEDMAVEEEEFAEDIRIPSMVPADEEEMEEEALDTEDELS DFHSESDDDFADHYTQSASLEESHTSNAVTFYDTPLPVTELEGDAEIIHRETMRKADDTA DKVITRGHSAKTICCSQFQTKRGFVKIVFANARAVPRFCRQKAQEMGYLIGHGTVAHAEL NMSFYRDKHRGHLKYICHACDKAACPQCRKVLIKRFGRTVSFGTKTRQAGKYSRKYKVLR YPPSVRDIYYSMISKHYKSTGDLLTDSDSED >gi|224461044|gb|GG657760.1| GENE 352 373837 - 374775 1387 312 aa, chain - ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 4 309 1 305 309 337 58.0 2e-92 MSEVKKIATRESYGNALVELGNKHEDVVVLDADLAAATKTGTFKKAFPERHIDCGIAECN MIGVAAGIATTGKVPFASSFAMFAAGRAFEQVRNSVGYPKLNVKIGATHAGISVGEDGAT HQCNEDIALMRTIPGMVVINPSDDVEAKAAVEAAYEHVGPVYLRFGRLAVPVINDKPDYK FELGKGVVLREGKDVTIVATGLPVSNCLEAAEKLAADGIDAKVINIHTIKPLDEELIAEA AKETGKIVTVEEHSVIGGLGSAVCDVVAEKAPAKVLKIGINDTYGESGPAVELVKKYGLD ADSIYEKVKAFC >gi|224461044|gb|GG657760.1| GENE 353 374763 - 375599 955 278 aa, chain - ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 4 268 5 269 270 333 61.0 2e-91 MNKSELMKTANEIRKGVVTATHSAKSGHPGGSLSAADIYTYLYFEEMNIDPKDPKKADRD RFVLSKGHTAPGYYSTLAQRGFFPVEDLKTLRKVGSYLQGHPDMKHIPGVDMSSGSLGQG ISAAVGMALSAKLSGDDYRVYTLLGDGEIQEGQVWEAAMLAAHRKLDNLVVIVDNNNLQI DGAIDEVNSPYPIDKKFEAFNFHVINIDGHDFDAIDAAFKEAKAVKGQPTAIIAKTVKGK GVSFMENQASWHGAAPNDEQYATAMADLEKAGEALCQK >gi|224461044|gb|GG657760.1| GENE 354 375623 - 376276 915 217 aa, chain - ## HITS:1 COG:lin2886 KEGG:ns NR:ns ## COG: lin2886 COG0176 # Protein_GI_number: 16801946 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Listeria innocua # 1 213 1 211 214 289 75.0 3e-78 MKFFIDTANVEDIKKANDMGVICGVTTNPSLIAKEGRVFEEVIAEIASIVDGAISGEVKA TTVDAEGMIAEGREIAKIHPNMVVKIPMTVEGLKACKVLSSEGIKTNVTLIFNANQALLA ARAGAAYVSPFLGRLDDINVRGVDLISEIAEIFAVSGIDTEIIAASVRNPIHVTDCALAG ADIATVPYKVIEQMTKHPLTDAGIEKFQADYRAVFGE >gi|224461044|gb|GG657760.1| GENE 355 376544 - 377641 1212 365 aa, chain - ## HITS:1 COG:RSc1014 KEGG:ns NR:ns ## COG: RSc1014 COG1609 # Protein_GI_number: 17545733 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 7 356 3 337 347 152 30.0 7e-37 MGKKKVTSTDIARAAGVSQSTVSMVLNKKYNVSFSKETVRKVEEAAEALGYAAPGRKSRR GSRKERLLVVFCSNLTNPYYVMLLQGIESRAKEQGFGLFVCNTQRDLRMEERYLKMMWEL RPLGIIYTCNPSECFMGLVEELSVHIPVAIINNQNEKLNVDAVELDNSKLGRMMARHLLE LGHRNVAYIAPPLTVRQKQRSKRVEGFLKEFAEAGIKENVIIKAAKEELDLDIAHIDSEY KIGYDLTKELLSETKDITAIVGLNDMIAFGILDALYEAKIKVPGDMSVMGCDNTLFARMH KVALTTIEHFVIFKGRDACDIIMKKIASHNSKYSEIEPISTYHVEYEPKLIVRGTTSYVR RRKKK >gi|224461044|gb|GG657760.1| GENE 356 377740 - 378336 720 198 aa, chain - ## HITS:1 COG:CAC0127 KEGG:ns NR:ns ## COG: CAC0127 COG0353 # Protein_GI_number: 15893423 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Clostridium acetobutylicum # 1 198 1 198 198 227 55.0 1e-59 MDYYSNQISKLIEELSCLPGIGTKSASRLAFHLIHMPVEEVKRLADTMVEARENVRYCSE CYTLTDQELCPICRNEARDHKTIMVVETTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP EDVKLKELMERLRKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVSRIASGVPVGGDL EYIDEVTLLRALEGRTEI >gi|224461044|gb|GG657760.1| GENE 357 378351 - 378698 175 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 7 112 2 107 114 72 34 4e-11 MAKKGGFPGGGMPGNMANLMKQAQKMQRQMEEQAKEMETKEFTASAGGGAVEVTVSGTRQ VLKVKLDEEVVDPDDIEMLEDLIVAAVNEAIGKVEEESASAMSKLTGGGQMPGLF >gi|224461044|gb|GG657760.1| GENE 358 378736 - 380310 1869 524 aa, chain - ## HITS:1 COG:BS_dnaX KEGG:ns NR:ns ## COG: BS_dnaX COG2812 # Protein_GI_number: 16077087 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Bacillus subtilis # 1 442 1 439 563 366 45.0 1e-101 MSYMALYRKFRPDEFEDVKGQDAIVKTLKNQIKADRIGHAYLFCGTRGTGKTTVAKIFAK AVNCEHPVDGSPCGECAMCRTIASGTSMNVIEIDAASNNGVDNIREIREEVAYRPTEGRF KVYIIDEVHMLSIGAFNALLKTLEEPPEYVIFILATTEAHKIPITILSRCQRYDFKRISI ETISGRLRELIEKEEWDVEEKAVRYIARMADGSMRDALSLLDQCAAFYIGERLTYDHVLE VLGAVDTEVFSRLLRELLDMDVHQVIETVEELVMQGRELSQLAADFTWYLRNLLLVKGSD NMEDVLDVSTENLIQLKEEAQMIDNDTLIRYIRIFSDLTNQLKFATQKRVLLEVTLIKLC RPAMETKPDTLLDRIRAIEKQLGQGLPAAEVKEKVVYVNADEAAQPAQKPKPQLPAALNE DVKAVAQDFRGIANEASPMLRNYLKRARLSAGEGNRLLIVLPDEVSAGVVGTEAHKAEVE QLIEDRIGKKVVLEVRFVETGRQFEDSFVDIEKLIHMDITVEDE >gi|224461044|gb|GG657760.1| GENE 359 380346 - 381422 1124 358 aa, chain - ## HITS:1 COG:Cgl1221 KEGG:ns NR:ns ## COG: Cgl1221 COG0205 # Protein_GI_number: 19552471 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Corynebacterium glutamicum # 3 338 5 333 346 259 42.0 6e-69 MFRIGMLTSGGDCQALNAAMRGVVKGICSKIQNVEIYGFQEGYKGLIYSNFKMLTSKDFS GILTLGGTILGTSRQPFKMMRVPDEDGLDKVEAMKHTYHKLNLNCLVVLGGNGTHKTANM LREEGLNVITLPKTIDNDLWGTDMTFGFQSAVDIATDTIDRIHTTATSHSRVFIIEVMGH KVGWVTLHAGIAGGADIILLPEIPYDIDVVVDAINKRKDAGKRFTIIAVAEGAISKEDAS LSKKELKAKQAKNSYPSVAYEISEKIQKKTDQEVRITVPGHTQRGGSPCAYDRVLATRLG AAAAEAIMDGDFGNMVAVRNNETVRVPLAEVAGKLKYVTPTSDIIKEAKLTGISFGDA >gi|224461044|gb|GG657760.1| GENE 360 381628 - 382437 684 269 aa, chain + ## HITS:1 COG:PA3657 KEGG:ns NR:ns ## COG: PA3657 COG0024 # Protein_GI_number: 15598853 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Pseudomonas aeruginosa # 24 268 5 248 261 237 48.0 2e-62 MDKLDIKLWSLAAKGQIVPDRSLLKTPDQIEAIKKSAALNTAVLDHVAAHICEGMNTAEI DRLVYDYTTAHGGIPAPLNYQGFPKSVCTSVNNVVCHGIPDENEILKNGDIINVDVSTIL DGYFSDASRMFTIGSISGRAAKIVKVTEECVELGLKEAKPWGHLGDIASAINTHARQNGY SVVEDIGGHGIGLEFHEDPYVSYVTPKGSEMVLVPGMMFTIEPMINEGGPDFYVDEKNGW TVYTMDGGLSAQIEYMVLITEKGAEVLTR >gi|224461044|gb|GG657760.1| GENE 361 382440 - 382997 389 185 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_3456 NR:ns ## KEGG: CDR20291_3456 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 181 1 179 180 172 55.0 7e-42 MKDFKRDNLLLSLCGLNCGLCPMRLGDHCPGCGGGEGNQSCRIAKCSLSHDKVEYCCECG SYPCGKYEGIDEFDSFITHRNRRKDLQKLKQAGVDLYVAEQEEKVRILRFLLENYNDGRR KNFFCVAVNLLELQDIRRIVEQAEAETKQDGSELKEKAACIVRLFRETADGQNIELKLRK KPGKK >gi|224461044|gb|GG657760.1| GENE 362 383154 - 386174 2068 1006 aa, chain - ## HITS:1 COG:BH0455 KEGG:ns NR:ns ## COG: BH0455 COG4403 # Protein_GI_number: 15613018 # Func_class: V Defense mechanisms # Function: Lantibiotic modifying enzyme # Organism: Bacillus halodurans # 68 1005 110 1045 1059 350 27.0 7e-96 MGEEFFKELYTNIPKIQSYLTNQPYETDRGEAARLFNKYECNERGIPQEAADFIAKYESE NFIQFYTPYLAAGILRLKHLIVKDDICRPEVYEQYLRSLFTKIQKICIRTLIHEIRQCKV NGELEGKDASGEYEYFIKQVVTGEWRNSLFGKYPVLARSVAEAVELSAQLYAEAVNRLSD ASKEITEQICEERTFTYITGIEGDIADSHRGGKSVLKISLDNGMTVIYKPHSLENETVFH ELLRQLGNRCGMEMYRMKKVEGSDWGFCECVKHQECACREEMERYYRRMGLCIFVFYLLG TNDIHSENIIAHGEYPVLVDLENIMSAPEEFEAMNITEKVQYFLHKSVLYSGALPSCKWI SGGGNVNVSGVGGRGGSRMPFKVPRVVNSRSSDIQIQYVHPVLDPDDNIPVLQGRPADPE RYLDDMTEGFKAAYMWALCNRRELQQWTEPLKCVESRYLLADTQRYVMCQNSSYHPALMT DGARRQIYLYTMWYGRSMESKGDRQVVEWEVKDLLNHDIPFFYFISSEKHLYHADGKRLE GYFARTSYDMLLERIQDLNEADMSNELELIEMTIVLQSQAEKELMNEGTEDGGSVAGEFK PDEKNKLLEMAVEIGERLLAGAVNVDGSEKGWYMACVTTDGSLGWMIQPVDMYLYSGVMG IAVFLHLLHEYSGSREFGCAASQLDRQLFAYTDYMRETKADDMASGIYNGEASIVYGYLF LYKRTGNEEYLTYARRHGEIVVRCACRDVNYDLLDGLAGAVYACCLLYECTEDEGWLKCA KEAAGRLIKAAVKTEDGLCWKNAQSEEALLGMSHGNAGIMTAFAALCRVCKKAEYMEAFR QALCYEDKCYDPGLKNWTDFRAVKSADRKLADTVAWCHGAGGILMSRLMSANMEQEELGD LIEFDVKRASAKLAGKCVREGMCLCHGSLGNLLMLQEYCKFTGDKEAEHIRQRNLKYVYE KLKDNDFCLLPQERYNPGLMSGYTGVGYGLLALYDDRLADILCLEI >gi|224461044|gb|GG657760.1| GENE 363 386360 - 386509 189 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571149|ref|ZP_03780147.1| ## NR: gi|225571149|ref|ZP_03780147.1| hypothetical protein CLOHYLEM_07237 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07237 [Clostridium hylemonae DSM 15053] # 1 49 1 49 49 88 100.0 2e-16 MQREEKNVEITGDLSLEFKEMQKLVDEEVGVPYSTWSKACTTFFTIICC >gi|224461044|gb|GG657760.1| GENE 364 386535 - 387704 599 389 aa, chain - ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 168 385 216 432 433 86 27.0 1e-16 MAILVVYNRRVAFLSFLVLGAEIATLWLGIFVYYRKKALLSFIFVFDTLLLTTLLDLGFS FFSISILGESFWSKVYYNISLGRICIYAVSRVVLCVICFVLQHCAKKFRFQVEDYKGVLF GFGTIGCIWGWWLLRTLLDRSSKNNLGDSLFVITCLAILIALMAIELKSIYLKMQSQMIQ MKNELLEKNYDNFSDLYENSKYIYHDFKNHMILLRNYLEREEYIKAKQYLEDIVEPLEEL SNYTYCNSQVLNLVLNLKGYESNQKGIRFWTEIENISYQYIDENDLGIIFFNLLDNAIEA CEKIEEKEKWIHVAVRNKKQMSIIKIENSIERQVLVKDGKYITEKENKTIHGLGLQSVKT LVEKYDGEVQCSHTEDIFSVVITFFENGL >gi|224461044|gb|GG657760.1| GENE 365 387836 - 388561 674 241 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 223 1 216 234 67 24.0 2e-11 MIRVAIVDDNQEIVDLVYKIVVDKMGKNQEQLDNIKCFTKPVTLKYELEEKRQYDLYLLD VEMPGVNGIELAKYIRKVQENAYIVFLTSHPEFAIYSYDLSIQAYQYILKGKMKTTLPYV LEKIQNNLKNKTEQFLVIHNNIRYEKIDHQKIIRMYKEGKNTVIVTDNEIHKKRSTLEKV LKELEGSSFIQIERGSIVNIERVDKILRNEVHMDNGDVLEISRANVKSVKQRINQYWGEH I >gi|224461044|gb|GG657760.1| GENE 366 388580 - 389137 495 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571152|ref|ZP_03780150.1| ## NR: gi|225571152|ref|ZP_03780150.1| hypothetical protein CLOHYLEM_07240 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07240 [Clostridium hylemonae DSM 15053] # 1 185 1 185 185 356 100.0 4e-97 MIKHTRENAETIRLAVMNLEREGLETGKVLMGSIRWLYEKYLITGDERFVRLSLAHIQVY LELGNSYEDNGSLFDSIIKLLDIKKEELFLELYKDCPVIRANKSQVRSMIGRWNPHIHSM SIQEVIDDIIEKVNNGKDGVYYYYSGKKLDSSKNVVPKDKYRLTIQGERAQFWDMRRNRY FTIKR >gi|224461044|gb|GG657760.1| GENE 367 389258 - 389593 160 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571153|ref|ZP_03780151.1| ## NR: gi|225571153|ref|ZP_03780151.1| hypothetical protein CLOHYLEM_07241 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07241 [Clostridium hylemonae DSM 15053] # 1 111 24 134 134 203 100.0 3e-51 MEEKIGFRVKQARLNAGLTQEELAEKANMSSSFISRLENGKILPSIKKLLMLADIMNVGL EDLLRDFFRHTGEPSDALTEQIFYQVDMMTVPEKQYLLSFVESFNNFMDKR >gi|224461044|gb|GG657760.1| GENE 368 389720 - 391768 2052 682 aa, chain - ## HITS:1 COG:ECs0453 KEGG:ns NR:ns ## COG: ECs0453 COG0366 # Protein_GI_number: 15829707 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 113 626 118 569 605 261 33.0 5e-69 MKEQALFCDGTASYVSPPEPAENEMVTLRFRTAKDDVECVRLVTRVGGYEMEKSDTRGGF DYYTINWRLNEERFHYCFEIRSGEDVCFYNRCGVSKEVVEFYDFVIAPGFSTPDWAKGAV MYQIYTDRFCNGDKSNDVESNEYFYIGGYSRKVTDWNKYPDTMGVREFYGGDLKGVMQKL DYLQELGVEVLYFNPLFVSPSNHKYDIQDYDYIDPHYGVIVEDGGEVLPEGVTDNSQAGK YQKRTTDRRNLEASNQLFIELVQELHRRGMKIILDGVFNHCGSFNKWMDRERIYESQSDY AKGAYVSPDSPYRSYFRFYKEEPENWPYNSNYDGWWGHDTLPKLNYEDSVKLENYILYIG RKWVSPPYSVDGWRLDVAADLGRSNEYNHQFWKKFREAVKDANPDAIILAEHYGDPSDWL RGDEWDTVMNYDAFMEPVTWFLTGLEKHSDEAREELAGNADNFVGSISHHMSNMLTPSLQ VAMNELSNHDHSRFLTRTNHMVGRVEKLGPKAAEAYVNPAVMREAVVIQMTWVGAPTVYY GDEAGVCGFTDPDNRRTYPWGNEDMEMLSFHKEMIRIHKEHKALRTGSLNMLSWEENVLT YGRFLEEEQIIVIINNRSELTEVTVPVWRAEVPEKCRMKRLIYSYSKGHTAEYEEYLVAD GELVVNMGAHSALVLETIKEEK >gi|224461044|gb|GG657760.1| GENE 369 391810 - 393657 1298 615 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 14 615 14 601 636 504 46 1e-141 MNEKKGRGLSGVTLLIFVVFLFAALWFTNQFDQKEKELTWKQFQKVIEKDNVESVVVSQN KNVPTGRVEIELKDKKTSDSEVKYYYVSDVNDIQDYLKDKNIEYEMPDVPQDSWLTTTIV PMLLMFGGILIIFFFMNRQGGGANAKAMSFGKSRARLSTEMDKKITFAQVAGLTEEKEEL EEIVDFLKSPKKYIQVGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFTISGSDFVEM FVGVGASRVRDLFEEAKKNAPCIIFIDEIDAVARRRGTGMGGGHDEREQTLNQLLVEMDG FGVNEGIIVMAATNRVDILDPAILRPGRFDRKVMVGRPDVKGREEILKVHAKGKPLSEEV DLKQIAQTTAGFTGADLENLLNEAAIIAAKDSRIYLKQEDIRKAFVKVGIGAEKKSRVIS EKEKRITAFHEAGHAILFHVLPDVGPVYSVSIIPTGGAGGYTMPLPENDEMFNTRGKMLQ DITVALGGRVAEEEVLDDITTGASQDIKQATSLAKSMVTKFGMSEAVGLINYDDDSDEVF IGRDLAHASRGYGESVATVIDQEVKRIIDDCYARARSIIKKYDDVLHACAQLLLEKEKIS RDEFESLFTGEVSEA >gi|224461044|gb|GG657760.1| GENE 370 393674 - 394201 626 175 aa, chain - ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 172 1 173 178 199 58.0 3e-51 MAETVKVLLSEEEVAKRIDELGRKISEDYAGRQVHLICVLKGGVFFMCELAKRITVPVSM DFMSVSSYGDGTSSSGVVKIAKDLDEALEGKDVLVVEDIIDSGRTLYYLLDILAKRHPNS MKLCTLLDKPERRVRDVTVDYVGFEIPDEFVVGYGLDYAQKYRNLPYIGVVEGVE >gi|224461044|gb|GG657760.1| GENE 371 394185 - 395555 1002 456 aa, chain - ## HITS:1 COG:CAC3204 KEGG:ns NR:ns ## COG: CAC3204 COG0037 # Protein_GI_number: 15896451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Clostridium acetobutylicum # 14 447 14 458 461 244 32.0 3e-64 MYQRVKEYAAEYHMLQQSDRVIAGVSGGADSICLLFVLLELKKEIGFSVTAVHVHHGLRA ETADRDAQYVEKICREQKVELLVYHEDVKTYAAEHKLTVEEAGREVRRAAFKEVLRKKQG TKIALAHHQNDNAETLLLNLCRGTGLKGMGGIPPVEGVWIHPLLCLKRKEVESYLEERGI SYCTDETNSEDSYARNKIRNQVIPYLEKEINAQASEHMAETARQMRLLGAYVDSQAAEQE KACVDTDGAGRSLLLKKEFARVPEVLRPYVIHRILCRTAGRSKNIEAVHVRLITELMHRQ VGRRLCLPYGVTAVRCYEGIRFTKEGRQSAGGGKTEDMHMTCRVIERTGEMRTFPKSPYT KWFDYDIIKNTVKMRHREPGDYLTIDRDGRTQKLKQFFINEKIPQEERDQIWLAADGHHI MWVVGVRQNQKYQVTEETKRILEIEVDGGKRDGRDC >gi|224461044|gb|GG657760.1| GENE 372 395626 - 397029 1642 467 aa, chain - ## HITS:1 COG:BH0078 KEGG:ns NR:ns ## COG: BH0078 COG2208 # Protein_GI_number: 15612641 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Bacillus halodurans # 17 460 358 802 830 182 25.0 2e-45 MAEVKEKGTFLNPYVIQMDKFADSLMHLSRTFLTLEDYKGTFSKEEIEDMFVKITDKVCE NCEKKEWCLGENRVHTYQMLYEILCTVEEYGAELNVEIKRKLQKKCISAPRFLRETLEVF ENAKQILLWNNRIVQNREGYAIQLNSFARMIQYTTRELDAGIFEDEHLEKKLKNHLKKFG IRMLSSVFFVTAEGKYEIHVTVKASKGHCIATKELAAEIGRCVGRVMMLEQGERPIIGED YCTVACVEGARYHTLQGVAKIGKGCEKISGDTFLMTDLPGGKKGVALSDGMGSGEDALRE STMVVEMLEELLEAGFPVKTAIQMMNTALVIGREEVRFSTIDVSLFDLYSGKCEFVKAGA STTFIKRKSGVERISSTTLPIGVIQDIEIESVEKELESGDFIIMVTDGVMDALPVGEQDV LMSTFIEGSNIVNPKELAHHILGQVLEWTGEVPIDDMTVLAVGMWKL >gi|224461044|gb|GG657760.1| GENE 373 397120 - 397443 418 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571159|ref|ZP_03780157.1| ## NR: gi|225571159|ref|ZP_03780157.1| hypothetical protein CLOHYLEM_07247 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07247 [Clostridium hylemonae DSM 15053] # 1 107 1 107 107 137 100.0 3e-31 MNGIKQKSRRRRQKKRVQRHKRSVLAISSVILLLLVMVSINGITLRAKEKSYVAQETELK KQIKEEKNRASKIDELEDYVGTDEYVEDVAREKLGLVHEGEIIFKAK >gi|224461044|gb|GG657760.1| GENE 374 397507 - 397860 263 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571160|ref|ZP_03780158.1| ## NR: gi|225571160|ref|ZP_03780158.1| hypothetical protein CLOHYLEM_07248 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07248 [Clostridium hylemonae DSM 15053] # 1 117 1 117 117 210 100.0 3e-53 MPGIREEFIVFVLAVLSGAIVRLIYKCISSFREIVKHSLAVIGVEDFFFWLGSALYLFVQ IYHTSDGSIRWYFILGVVIGAILAAFLIRQAEKVHKKMYARGKKNLSKTIDKSGKKR >gi|224461044|gb|GG657760.1| GENE 375 397867 - 398151 255 94 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0530 NR:ns ## KEGG: EUBREC_0530 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 94 1 94 94 99 56.0 3e-20 MEERPVQKGHKLVVNNRKTSLVTGVIDVLSFDLNEILLETEQGMMMVKGTDLHVNRLSLE KGEVDLSGNIDSIAYSDVHAAGKQGENLFSKLFR >gi|224461044|gb|GG657760.1| GENE 376 398201 - 398440 284 79 aa, chain - ## HITS:1 COG:BS_yabO KEGG:ns NR:ns ## COG: BS_yabO COG1188 # Protein_GI_number: 16077127 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Bacillus subtilis # 1 79 1 79 86 81 59.0 4e-16 MRLDKFLKVSRLIKRRTVANEACDAGRVTVNGSVAKASVKVKPGDIIEIQFGTKTVKVEV LDIQETTKKEEAKDLFKYL >gi|224461044|gb|GG657760.1| GENE 377 398523 - 398798 316 91 aa, chain - ## HITS:1 COG:HI0430 KEGG:ns NR:ns ## COG: HI0430 COG0776 # Protein_GI_number: 16272378 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Haemophilus influenzae # 1 89 47 135 136 100 64.0 8e-22 MNKTELVAAIAEQAELSKKDSEKALKAFVDVITAELKKGEKIQLVGFGTFEVSERAAREG RNPQTGKTMKIAACKAPKFKAGKALKDAVNA >gi|224461044|gb|GG657760.1| GENE 378 398976 - 400709 2163 577 aa, chain - ## HITS:1 COG:CAC2337 KEGG:ns NR:ns ## COG: CAC2337 COG1109 # Protein_GI_number: 15895604 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Clostridium acetobutylicum # 1 574 1 571 575 594 52.0 1e-169 MEYLEKYREWLENPYFDEDTKAELREIAGDDSEIKERFYKDLEFGTAGLRGIIGAGTNRL NIYTVRKATQGLANYIMKRNGQDRGVAIAYDSRRMSPEFADEAALCLAANGIKAYVFETL RPTPELSYAVRALGCIAGINITASHNPPEYNGYKVYWEDGAQITPPHDKGIMDEVKAVTD YNTVKTMGLADAKAAGMYEVIGAQVDDGYIAELKKQVIHQDAIDEMGSELKIVYSPLHGT GNIPARRILKELGFKNVYIVKEQELPDGEFPTVSYPNPEAEEAFTLGLKLAREVDADLVL ATDPDADRLGVYVKDAKSGEYKVLTGNMSGCLLADYELGQRKAAEGLPEDGYLIKTIVTS NMADAIAKGYGVGLIEVLTGFKYIGQQILGFETTGKGKYLFGFEESYGCLIGTHARDKDA IVATMALCEAAAYYKTKGMTLWDAMVDMYERYGYYKDSIQSITLKGIEGLQKIQEILETL RKNPPMEVGGYRVLKARDYEADIIKDITTGEVTPTGLPASNVLYYDLTDDAWLCVRPSGT EPKVKFYYGIKGTSLEDADEKSRMLGEEVLSMINTML >gi|224461044|gb|GG657760.1| GENE 379 400759 - 401850 732 363 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3824 NR:ns ## KEGG: Cphy_3824 # Name: not_defined # Def: CotS family spore coat protein # Organism: C.phytofermentans # Pathway: not_defined # 1 359 1 345 347 206 34.0 1e-51 MQEYELNVLDQYNIDVTGTRKTRGAILCDTQQGLLLLREVTTSEKRIPALCELYEYLKSQ GYEWTDPILLNKEGEYVSTAEDGGKYILKQWYQGRECDIRKPAELLAAAGNLAKLHTVMC HELEQGAPAGAHLGEEYIRHNRELKKVRRFMRGLSPKGEFEFAFLKYFDQMYQWADLALE ELERSDYDALYEDSMERGCMTHGEYNYHNILILSGAAAAGEAVPASVSGRNAPRGADYRP HGSHSAREPLRIATTNFDKFKKDIQVEDLYYFLRKVMEKHGWKERLGDNMLNAYSAIHPL SSGETEYIKNRLIYPEKFWKIADSYYHSNKAWISVKSIEKLNVAIRQTEEKKRFLENIFS FHL >gi|224461044|gb|GG657760.1| GENE 380 402003 - 403337 1257 444 aa, chain - ## HITS:1 COG:TP0270 KEGG:ns NR:ns ## COG: TP0270 COG0617 # Protein_GI_number: 15639262 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Treponema pallidum # 23 439 21 466 478 228 36.0 3e-59 MPDLIIKLPAKVNDIITTLQAHGFEAYAVGGCVRDSVLGRTPEDWDITTSAMPEQTKSLF PRTFDTGIEHGTVTVLLEHEGFEVTTYRIDGKYEDNRHPKEVTFTRSLKEDLLRRDFTIN AMAYNEKDGLTDIFGGMKDLESGLIRCVGDAKERFSEDALRILRGVRFAAQLGFDIEDET KEGMRKLAYTLKNISAERIQTELVKMVTSKRPQLLMTAYELGITRVFLPEFDRMMETEQE TPHHMYNVGEHTLHAMNNVRPDKILRLTMLLHDTGKPAYKTVDANGVAHFKKHALESENI ARSVLRRLKFDNDTLHKVSKLVYYHDYRMPARAKNIRRAMNMIGEELFPYYMEVRKADVL AQSEYLREEKIQNLSEIESIYKEIKAAGQCVSLKELAVTGKDLIEAGMAPGKEIGEKLSE LLALVIEEPEMNTKEKLLDRLGIK >gi|224461044|gb|GG657760.1| GENE 381 403498 - 404265 369 255 aa, chain - ## HITS:1 COG:CC1445 KEGG:ns NR:ns ## COG: CC1445 COG1943 # Protein_GI_number: 16125694 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Caulobacter vibrioides # 14 142 14 142 221 72 31.0 8e-13 MSRHRRRESITGLYHVMARGLNRAAIFAENRERKRFISLLRDNLSQFNVAVYAYCIMPNH IHLLVKTEIQELSSFMAKVLAAYAQYYNYKNNRIGYVFQDRFKSQCIEEEEYFWNCLRYI HLNPLMDRDLNKLQSYKFCSFHEYCHRKGDILSEHAFIVKEKRFQTNKQFLAFHKRDNRD VFVDVSEDTHWNNLRIAREVLFDMQWQLGVPEEEILEYIDTRRLFGEVLMKSLGISKKGA DEIQAVLRKEIKGTG >gi|224461044|gb|GG657760.1| GENE 382 404373 - 405815 1222 480 aa, chain - ## HITS:1 COG:BB0402 KEGG:ns NR:ns ## COG: BB0402 COG0442 # Protein_GI_number: 15594747 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Borrelia burgdorferi # 11 480 5 488 488 444 47.0 1e-124 MAKEKKLVENITPRDEDFAQWYTDVVREAELCDYSSVKGCLNYLPNGYAIWELIQADLDK RFKETGVENVYLPTLIPENLLEKEADHVEGFAPEVAWVTHGGMERLQERLCIRPTSETLF CDLWSKTVQSYRDLPKVWNQWNSVLRWEKTTRPFLRSREFLWQEGHTLHATYEEAEERTI QMFHVYEDCYKETLAIPFVSGRKAEHEKFAGAQDTYTIEALMHDGKALQSATSHFFGSGF PDAFDIKYVDKNNQLHSAYETSWGWSTRSIGAIIMVHGDDSGLVLPPHVAPVECRIIPIA QHKEGVLDRANVLLDELKKAGYRVKIDDSEKSPGWKFSEQEMLGIPTRIEIGPKDIEKNQ VVVVRRDTREKIIVSLDEIATKLRDILETIQEDMYNRAVDFLNGHIDTAVEMDEMVEKFK ANRGFVKACWCGDPECEGEVKYATGGAATRCLIEDEEMISDKCIWCGKPAKHMAYWGKSY >gi|224461044|gb|GG657760.1| GENE 383 406219 - 407184 834 321 aa, chain - ## HITS:1 COG:BH0465 KEGG:ns NR:ns ## COG: BH0465 COG0530 # Protein_GI_number: 15613028 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Bacillus halodurans # 1 321 1 317 318 217 44.0 3e-56 MEYVKLILGFLLLIKGADLFVDGSSSVAKILKVPAIIIGLTVVAFGTSMPELSVSATAAL KGNNDLAVSNVLGSNLFNLLVVLGCCALVQPVRAKWSLLRKEFPFSIFITLILLLLNSDF SITKVLKGDQIFVLGRYSGLLLLTLFVVFLFATVRSALRSRNEMPVDEEDYKVMSPLKSG VFIAVGLAGIIWGGDLVVDSASSIAKDFGLSQTFIGLTIVALGTSLPELVTSMVAAGKGE NDLAVGNVVGSNIFNILLILGVSSVITPIKLDVTAVYDTLILVAASIIVYVAAISKHEIK KTEGVMFLLAYLAFFVYILLR >gi|224461044|gb|GG657760.1| GENE 384 406865 - 408010 199 381 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 147 380 83 278 287 81 30 6e-14 MEKGNSFLRSDHLALTGCTSAQHPSTTRRLNRFDPSTLLTARSLFPFRAAVALTESSGML VPNATTVRPMMMAGTFNIFATLELPSTNRSAPFINNKKPNISFTYSIVNYPLPLNIFAYF HALCLNDKSPFNQSQGDFSMKSNRLDILYEDKDIIVCVKPHGTAVQTKNTSAPDMVSMLK THIFSQEPQNGEPYLAVIHRLDQPVEGILVFAKSPFAAKELNRQLQNKGFGKYYRALVDG IPPREEDTLENYMLKDGRTNTSRICTPDTPGAKQARLHYKIIQEGHGYFKKGHGETKRGR GKSQFPPSPAGPQTELDIQLDTGRHHQIRVQMAHLGCPIAGDTKYNPGAPNDGEWQQIQL CAYKLSFRHPRTGRQMDFSLL >gi|224461044|gb|GG657760.1| GENE 385 408182 - 408475 228 97 aa, chain - ## HITS:1 COG:CAC3223 KEGG:ns NR:ns ## COG: CAC3223 COG2088 # Protein_GI_number: 15896470 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein, involved in the regulation of septum location # Organism: Clostridium acetobutylicum # 1 82 1 82 95 117 71.0 7e-27 MQITDVRVRKVAKEGKLKAVVSITMDDEFVVHDIKVIEGEKGLFIAMPSKKALDGEYRDI AHPINSGTRERIQSIILERYEEALQEEPVAEPDMAEV >gi|224461044|gb|GG657760.1| GENE 386 408506 - 409624 1177 372 aa, chain - ## HITS:1 COG:TM0239 KEGG:ns NR:ns ## COG: TM0239 COG0448 # Protein_GI_number: 15643011 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Thermotoga maritima # 1 349 1 350 370 312 43.0 7e-85 MRAVGLILAGGNSNKMRELTHKRAVAAMPVAGSYRAIDFALSNMSNSHIQKVAVLTQYNA RSLNEHLNSSKWWDFGRKQGGLYVFTPTITADNGYWYRGTADAIYQNLDFLKRCHEPYVI ITSGDAVYKMDYNKVLEYHIAKKADITVVCKDLEAGEDASRFGTIKMNESMRIEEFEEKP MVATSNTISTGIYVIRRRQLIDLIEHCAEEERHDFVTDILIRYKNLKKIYGYKIKDYWSN ISTVDAYYRTNMDFLKPEVRNYFFKEHPDIFSKVSDLPPAKYNPGSVVKNSLVASGSIIN GTVENSILFKKTFVGNNCVIKNSIILNDVYLGDNTYIENCIVESRDTIRANTRHVGENGV KVVVEKNERYAL >gi|224461044|gb|GG657760.1| GENE 387 409621 - 410895 1193 424 aa, chain - ## HITS:1 COG:TM0240 KEGG:ns NR:ns ## COG: TM0240 COG0448 # Protein_GI_number: 15643012 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Thermotoga maritima # 7 418 5 419 423 457 53.0 1e-128 MIKKEMIAMLLAGGQGSRLGVLTAKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQ YQPLRLNTHIGIGIPWDLDRNIGGVTILPPYEKSNSSEWYTGTANAIFQNLDYMDTFNPD YVLILSGDHIYKMDYEVMLDYHKENKADVTIAAMPVPMEEANRFGIVITDEEGRITEFQE KPPEPKSNLASMGIYIFSWPVLKEALLALQDEPGCDFGKHIIPYCHDREDRLFAYEYNGY WKDVGTLGSYWEANMELIDIIPEFNLYEEFWKIYTNSDIIPPQYVSGDAVIERSIIGDGS EIYGEIHNCVIGSGVTIGAGTVVRDSIIMKDVAVGSNCVIDKSIIAESVKVGDNVTLGIG AEVPNKLKPSVYSFGLVTIGENSEIPGGVQIGKNTAISGVTSKEDYPDGILESGETLIKA GERV >gi|224461044|gb|GG657760.1| GENE 388 411126 - 412505 1219 459 aa, chain + ## HITS:1 COG:CAC3225 KEGG:ns NR:ns ## COG: CAC3225 COG0773 # Protein_GI_number: 15896472 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Clostridium acetobutylicum # 12 459 13 458 458 442 50.0 1e-124 MYKINFEQPVHVHFIGIGGISMSGLAEILLKEGFTVSGSDNKESALTDHLSSLGATIFYG QKASNIIDGIDVAVYTAAIHEDNEEFKAAAQKGIPMLSRAELLGQLMTNYDVPIAVSGTH GKTTTTSMLSHILLAGDLDPTISVGGILKAIGGNIKVGTSGLFVTEACEYTNSFLHFFPK ISVILNIDEDHLDFFKDLDDIRNSFRRFAALLPADGTLVINGEIENLEEITAGLSCRVVT YGTEHSMNYSASNISHNEKGDASFDLVKNGEFMERVQLSVNGDHNVSNALAAVAVADILS VPLADICRGLKEFAGTNRRFEHKGEKNGFTVIDDYAHHPTEIKASLTAAAHYPHKELWCV FQPHTYTRTKALFHEFVDALALADHVILADIYAARETDTLGISSRDIADALKEKECDAYY FSTFKEIEDFCLDMCHKGDLLITMGAGDVVNIGESILKR >gi|224461044|gb|GG657760.1| GENE 389 412642 - 413691 953 349 aa, chain + ## HITS:1 COG:CAC3587 KEGG:ns NR:ns ## COG: CAC3587 COG3935 # Protein_GI_number: 15896821 # Func_class: L Replication, recombination and repair # Function: Putative primosome component and related proteins # Organism: Clostridium acetobutylicum # 13 348 12 321 328 140 29.0 5e-33 MKKLTLTNHAQEKTTVLENEFIDQYMAEANGEYVKVYLLLLRHLNNPDGSLSVSQIADIL DDTEKDVIRALNYWKKRGLLDFDPAELNGAPSAEKAAARTVPAHVAPVQEESADKPAAPP AAAAPTQNIQPYRNRREREEFKELLFVAEQYLGKTLSATEIDTITYFYDTLHMSTDLIEY LIEYCVENGHKSMHYVQKVALSWAEQKITTVAGAKANTILYNKNCYSVLNAYGIKGRVPA ASEITCIRRWNEEYGFSLELILEACSRTMNTIHQPSFDYTESILKSWLAKGVKHLKDVEA LDAEYLLEKERKKKKETKAAAPSGSRNNKFNNFEGRDYDMNDLERKLVQ >gi|224461044|gb|GG657760.1| GENE 390 413731 - 414744 800 337 aa, chain + ## HITS:1 COG:CAC3588 KEGG:ns NR:ns ## COG: CAC3588 COG1484 # Protein_GI_number: 15896822 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 1 328 1 326 329 209 38.0 5e-54 MALSNSQYEFLMRTYEQKQLDNESRLRRRYENVYSRIPELEEIDHSISAFSVAQARRLLE GDGQALSSLKESIAELSARKIQLLKDNGYPDDYLELHYTCPDCKDTGYRGTKKCHCFKKA IVDLLYTQSNLQEILEKENFSTFCIDYYSSNHIDPVKGRSSREAIETALKACRGFVDTFS SEFRNILLYGDTGVGKTFLTHCVAKELIDDSFSVIYFTAAQLFDVFAQNTFGRREDAKDD SFEHIYSCDLLIIDDLGTELPNSFTTSQLFVCLNERILRQKSTMISTNLALEDLKSIYSE RTFSRLSSNFTMLRLTGDDIRIQKKLLNLGGTKDVTP >gi|224461044|gb|GG657760.1| GENE 391 414731 - 415915 1296 394 aa, chain + ## HITS:1 COG:CAC0819 KEGG:ns NR:ns ## COG: CAC0819 COG0462 # Protein_GI_number: 15894106 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Clostridium acetobutylicum # 15 390 11 371 371 378 47.0 1e-104 MLRRNERNLENIPVGALGIIALDGCKEMGKRVDDYIVKWRREDGPEYKNDIVFNGYERDT YLVNAKVPRFGSGEAKGILGESVRGRDLYLMVDVCNYSLTYSLTGHTNHMSPDDHYQNLK RVIAAVGGKGRRINVIMPFLYESRQHKRSSRESLDCALALQELVRMGVDNIITFDAHDPR VQNAIPLSGFETVRPTYQFIKGLLRHFKDLSIDSEHMMAISPDEGATERAIYLANVLNLD MGMFYKRRDYTRIVNGRNPIVAHEFLGSSVEGKDVIILDDMISSGDSILDVAKQLKQRKA KRIFAAATFGLFTNGMDKFDKAYEEGLFDAILTTNLIYQTEELLEKPYYISCDMSKYIAL MIDTLNHDGSISSILDPNERIQNVLQKYRRGEEI >gi|224461044|gb|GG657760.1| GENE 392 416018 - 416974 941 318 aa, chain - ## HITS:1 COG:no KEGG:Cmaq_0649 NR:ns ## KEGG: Cmaq_0649 # Name: not_defined # Def: xylose isomerase domain-containing protein # Organism: C.maquilingensis # Pathway: not_defined # 16 295 25 273 304 94 24.0 6e-18 MAVKYGCTVWTLMEPDYHAPYDEAVKKVAEAGFDGIELMVDDERELEAYWTDDTVSHMKE LLEQNGLELIQLCMFQNMIGGLASLRPEEQDRAVENLGRVCRLAKQLGAGAVSFTAPYPQ DDITVRTTATLPEYYYLNLPDMVLPGGETRSVEGWRFDAKFRLYFPDDFEWETYWENFIA GMKRAEDTARAEGMPCRIENRYNTMAPHTDTMLRMLKQLKGDYMSVSFNTAQAFIQREIL PWAVHKYGGRLTHVRACDGDGLACYNLPVGAGICDWAGILEALCEIGYDGYISFEWLNDA DKEENVREALEYLKRRQK >gi|224461044|gb|GG657760.1| GENE 393 417000 - 417938 980 312 aa, chain - ## HITS:1 COG:RSc1247 KEGG:ns NR:ns ## COG: RSc1247 COG1082 # Protein_GI_number: 17545966 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Ralstonia solanacearum # 1 292 6 289 313 63 21.0 5e-10 MAMKVGCAAWTWTEPAHNPPYEGAIRSIGELGFDGMELILRDFEDIHGYWTPEKRKEIKR MLDYYGLEVSQFAMFQNVMDGLASLDKERIERSVDAFKAGCEISADLGCGIVNFVSPWPD VITAPNSYLPEYYYINVPGVDPRIRALQTFQTKLKYNFPKPFDWERYWESHVDAVRRVTQ TAKSYGFRLAIENHANTMTPHTDSVIRLCEEVGEDNIGANLDTVWAYLQREYLPWSVHKY GKRLYHVHMRDGDGLAAYNLPVGYGNTDWEEVVKALKDIGYDGYLSLEWAHDSEKTRHCT EALQYLRALIDA >gi|224461044|gb|GG657760.1| GENE 394 417956 - 418789 920 277 aa, chain - ## HITS:1 COG:mlr7227 KEGG:ns NR:ns ## COG: mlr7227 COG0395 # Protein_GI_number: 13476021 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Mesorhizobium loti # 25 276 30 280 280 162 37.0 8e-40 MNKKLTTKILQYFSLLVTLGIIIFPVYWIIISSFKTKDEILTYPPKLFPDTFTLDNYVTA FREYDVLTFLRNSLIVTIATMLLTVIIAAFAAYAMCFFKFAPAKMLTNLLYIMQILPTIT MMVPLMTIYRMMGIQNTYASLILTYTASITGIPIALILMTGHFTGIPKELFESAAIDGAS PTKAFFKILLPLGMPGIVCTAIYVFVQAWQEFMFAVNLITTPGKYTLPIGLQSFVGMRST DWGGMMATCTLIAVPAVLLFTLVQNYFVDNMSGAVKE >gi|224461044|gb|GG657760.1| GENE 395 418786 - 419682 957 298 aa, chain - ## HITS:1 COG:BH1245 KEGG:ns NR:ns ## COG: BH1245 COG1175 # Protein_GI_number: 15613808 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 49 283 196 431 445 154 33.0 2e-37 MRKKLNNIMPYLYSTPFFILIFLFMLCPFVLNIGISFTNYSMNGRKLQFVGIKNYTDVLS NPGTWSAIRLTVVFIIGCVCLTMLLGMFYAIVMTFRIKGSILIKAFILMPWIIPESVTAY VWKWLFSSDTGMIYYILRETGLIADGTSFFFDGVLAMAMVIMANVWRTAPFVAVMTYAKL SAVPDSYIEAAKMDGANALQTFRYIKLPWIGPILSRCMMLLFVWSFNSFSIIYILTNGGP AGATTTLPYLIRQAGFQNFNFAQATALSVIALVIILVCFAAVKAGAAILKMSRKEAVS >gi|224461044|gb|GG657760.1| GENE 396 419730 - 421013 1466 427 aa, chain - ## HITS:1 COG:lin1841 KEGG:ns NR:ns ## COG: lin1841 COG1653 # Protein_GI_number: 16800908 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 49 400 43 379 414 89 25.0 2e-17 MKGKKLISIALVLSMLAACAGCGKKESAQKDEKEGKETLTILIDGSTEGTDGGLITENIK GFEDKYNVKVNFVETPYAELHQKLMNVSASGGDDFDAVFVETDFVSQMAKAGVLEPLDKY EEKSETLKFDDFIDSTIERNTVDGSVYAIPQVADVQTTIYNSDVLNDLGFENPPATIDEF IDYCQKAEAKGYLPLAVRYNSTAIACQLMGLFLFTDGGAFVKEDGDSWKADLNNATGEKW IENTRKIFATIDGDTLATMDDTAMYEALNSGHAGCTIGGAWMYDALNEDVRGKLVTAPFP KGSGSEVALMSGWNLGVFANSKNKDMAFKFLEYKADPENAGKMTAGLSGRKDAEEHFTEE QKSYYPEFQDLMQYGVAISPVGFQLRSEMTTAFLPVFQQITFDDKTSLSDAAKLANDTIQ KVIDDNK >gi|224461044|gb|GG657760.1| GENE 397 421041 - 422177 1042 378 aa, chain - ## HITS:1 COG:CC1630 KEGG:ns NR:ns ## COG: CC1630 COG0673 # Protein_GI_number: 16125876 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Caulobacter vibrioides # 4 341 3 336 376 160 29.0 3e-39 MNVLKTAVTGMGFIGRQHAEAVRRVPNVKITAVSDPDPSVGNWCEENGIPNYYADYREML AKEDIDVVHNCSPNHLHFEINKAAIEHGCHIYSEKPLTLRSSEAEELTEMAAKRGVRSAV NFNYRNNVMVHEMKGRFAEGRLGRTSHIQAEYLQDWLLYETDFDWRIRKEIGGDSRAAGD IGSHCFDAVQFITGKKITSVYARYFTLYPERKQYKGGGTFAEGPKEGRAGIVPVETEDAA SILFQMEDGMQGTLVISQVCAGKKNGMKILISGNKESVEWEQERPDRLLIGKRDSANEIL YADRKYLTEYAGMNAVLPNGHPAGWTDALANALKDFYHSIQEPGSTYRYADFAQGYYVTK IVEACYESNLKNCWIDIE >gi|224461044|gb|GG657760.1| GENE 398 422174 - 423100 893 308 aa, chain - ## HITS:1 COG:mlr1887 KEGG:ns NR:ns ## COG: mlr1887 COG1082 # Protein_GI_number: 13471795 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mesorhizobium loti # 1 303 1 303 304 250 39.0 3e-66 MRQGFVSAALGGLSFEEVVDFAGQNGFTCVEMACWPRGKADRRYAGVTHIDVDKLDDAGM QYVLGYCRDRGVTISSLAYYPNIMDADLEKREYVIRHLKRLICASADMGIHMVSTFIGRM TDKSVEDNLKEFERVWEPIVRLAEEKKVRIAIENCPMFFTSDEWPGGQNLASTPAIWRQL FSILPSDYLGLNYDPSHFVWQKMDYIRPVYEFCDKIFHVHYKDIKLHEDRLSDVGVMAPP LQYMTPRIPGHGDVDWGEYIAALLDIGYEGAACIEIEDKAFEYSPEGIKEALLISRRYLS QYIGGDNT >gi|224461044|gb|GG657760.1| GENE 399 423290 - 424300 893 336 aa, chain + ## HITS:1 COG:BH2313 KEGG:ns NR:ns ## COG: BH2313 COG1609 # Protein_GI_number: 15614876 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 7 333 1 329 337 181 32.0 2e-45 MSSYKKITISQIAETAQVSVATVSRLINKTGYVKPETRKKILDAMDELDFNQKNPDSIRN TNSILVCLPDFHNPFNGDVIDGIQSVALSRGYQTFYYEAKDFKNALSDYESILKKHQFSG ILLVHNVVDLELLDDLRLRFPVVMCSEHCDRSNVSFVSIDDNIAAQNAINYLITIGRTKI AFINSMLKNNYAKHREKGVLHALKHAGLTLNLDWIAHIADINFDMAVSAAVSMLSMEERP DAFFCVSDVYAAAVIKAAHSLNLRVPEDVAVMGFDNISLATMTVPSLTTIRQPSFQIGQQ SCDILINQIENPSSAIKHVILDTELVIRDSTGSRIN >gi|224461044|gb|GG657760.1| GENE 400 424383 - 425912 1591 509 aa, chain - ## HITS:1 COG:lin2324 KEGG:ns NR:ns ## COG: lin2324 COG4717 # Protein_GI_number: 16801388 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 292 493 683 894 908 61 27.0 3e-09 MVKNFGKIKDKNVTLSDGVNLLYGENESGKSTLHTFIKCMLFGLERGRGRASANDTFSTY EPWENPNYYSGILKFESGGKSFCLSRNFDRYSRSAELICEDDGEELSVADGDLEMILGGL TGAVYDNTVSVGQLKAEPGQTLAAELKNYASNYYAAGSSDINLEKATGALRARLRELERE AKEALEEKHRKREKIELEASYVWRDVHRLEGERERIGEELESRRKKERERQEEPENKGVI DELRPNKWRIHPVEIVLFAVVVVFAFALIPKPWNYLVAIILFLLCGIYVWNRMKVDKRTV KTEPEIILEEITPEEEKIPLEKLRWEMNHVCEELREKQVQYDNLREQLEELDEVSSMSRE QERNIQGVRLAMERLSELAAGMQKELEQKLDDRASEIMSEITGGRYTKLVVEDDLHMNLI CGGRKIPVEQVSRGTIEQTYFALRMASAGLLHEEEYPVILDDTFVYYDDVRLENTLRWLA ENKKQVIIFTCQKREEHILDELGIKYRKI >gi|224461044|gb|GG657760.1| GENE 401 425927 - 426988 955 353 aa, chain - ## HITS:1 COG:BS_yhaO KEGG:ns NR:ns ## COG: BS_yhaO COG0420 # Protein_GI_number: 16078055 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Bacillus subtilis # 1 283 5 305 408 89 30.0 7e-18 MKFIHIADVHLGASPDAGSAYSKSRTQEIWNSFAGVIEACRENETDVLLIAGDLFHRQPL LRELKEVNFLFSGIPHTEVFIIAGNHDYLKKDSYYRTFSWAENVHMIRSEQITCVEVPRL DLAVYGLSYVQKENTERAYDRAVPFGKQKYEILLGHGGDDKHIPFRAGDIAKLGYDYAAF GHIHKPQQLIPDRVYYSGALEPTDKNDTGAHGYISGELTESGCTASFVPCAAREYIHMDI PVTENMTGYGVRGAIRSAVEDKGVQNIYKIILTGQRDPEILFDLTNMDSYGNIIEIADNT RPAYDFERLYEQNKGNLLGKFIQNLNTGDKESIEYCALCEGVQALMETRRGFK >gi|224461044|gb|GG657760.1| GENE 402 426894 - 428132 1462 412 aa, chain - ## HITS:1 COG:BH1809 KEGG:ns NR:ns ## COG: BH1809 COG0642 # Protein_GI_number: 15614372 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 76 371 49 346 351 170 36.0 5e-42 MKNNYRKLKFSILLQTVLVTALTVLVGGFILNYIIDGIYNDSFAKAFVRIMMDLNVKEQT AIDLYWRLIGNNKTFFMIVGFLLLFALFFYVALSKMTKYLDQVGEGIENILSDSTEPIHL ITELKPIEIRLNEIKATLKRQELEAVEGEKKKNDLVVFLAHDLKTPLTSIVAYLTMLDSY PEMAEEERAKYIHVSLEKSIRLGELINEFFDITRYNLQDIELEPVEINLSMMLEQLADEL YGVLQEKHLTCEVQVEENLEVYGDPDKLARVFDNLLRNAIAYCYDHTKIEIGAQMKRGDI EIIFTNEGDKIPGTMLQTIFEKFYRVDGSRSSGTGGAGLGLAIAKEIVELHGGLIRAKSD DIKTQFIVTLPSKNIEEEGAADEVHTHRRRTFRCKPGRRKRIQQKQDTGDLE >gi|224461044|gb|GG657760.1| GENE 403 428122 - 428811 787 229 aa, chain - ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 3 229 6 231 233 217 49.0 1e-56 MNILVVDDEKEIADVIELYLQSDQYDVHKCYTGQEALDYIGSMKIDLAILDIMLPDIDGF QILKQIRGKYTFPVIMLTAKTEYMDKITGLTMGADDYIPKPFNPLELVARVKAQLRRCTQ YNDGSREEGDIIDFGGLFLNRTSHECVYNEVPLTLTPIEFDILWLLCENRGKVISSEELF EKVWNEQYYKNSNNTVMVHIRHLREKMSAPTGKSDFIKTVWGVGYKVEE >gi|224461044|gb|GG657760.1| GENE 404 428830 - 430221 1807 463 aa, chain - ## HITS:1 COG:CAC3260 KEGG:ns NR:ns ## COG: CAC3260 COG0017 # Protein_GI_number: 15896505 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 1 463 1 463 463 645 65.0 0 MDLITIRELYKNREEYLDKDITVGGWVRSIRDSKAFGFIVVNDGTFFEPLQVVYHNTMDN FDEISRLNVGAAIIVTGTLVATPQAKQPFEIQAKEITVEGASAPDYPLQKKRHSFEYLRT IAHLRPRTNTFQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEMFRVTTLD MQSIPKDDSGKVDYSQDFFGKETSLTVSGQLNGETYAQAFRNIYTFGPTFRAENSNTTRH AAEFWMIEPEMAFADLDDDMMLAEAMLKYVISYVLEQAPEEINFFNSFVDKGLLERLNNV VSSEFARVTYTEAVEILEKNNDKFEYKVSWGTDLQTEHERYLTEEIYKRPVFVTDYPKEI KAFYMKQNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARMKEMDLKEEDYEFYLDL RKYGSTRHSGFGLGFERCIMYLTGMGNIRDVVPFPRTVNNCEL >gi|224461044|gb|GG657760.1| GENE 405 430505 - 430996 458 163 aa, chain + ## HITS:1 COG:CAC2413 KEGG:ns NR:ns ## COG: CAC2413 COG4708 # Protein_GI_number: 15895679 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 155 1 157 166 84 38.0 1e-16 MNNKNISFMTQAAMIAAIYVVLTYFFAPFSFGEVQVRIAEALTILPLFTPAAIPGLFVGC LIGNILGGAILPDIIFGSLATLIGAVFTRRLQNNNKFLAPLPPIAANTIIVPFVLRFGYG VALPVPLMMLTVGIGEIVSCGVLGMVLYFALNKYKNMVFKPCY >gi|224461044|gb|GG657760.1| GENE 406 431073 - 433532 2480 819 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0675 NR:ns ## KEGG: EUBREC_0675 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 818 1 840 842 381 29.0 1e-104 MNIKNRLINAGILTAVFIAAVFVFSFITNRGNDNMTADMGVTTYPQVSFSCEGFNVNLLS GYAKKMDIPSMRDTITPVSGQSLDLNIEAYDNKINRLKYAVYTLDGKDKLFEKKVKKAGK NVSLELTGGELLSQERVLEIVLSLDGDRSVYFYTRIADSSNDNVAECLNYISDFHENALA KAEGTGVGAAIEPNEEGDNSTFQHVTIHSDYNQVTWGSLEPSVEGGERWYIKETNSTYTS VQLEYKVRCKGEENEEDVYKAKEFFRVRHIADAQKTYLLDYDRTMEQIFDPTRKVLSEKG VLLGITSHDVQYMVSKDGSIVSFVQADELWNYNKDTDELSLVFSFSDAENTDVRSLTAKH EVKLLASDDEGNVTFAVYGYMNRGEHEGEVGVAIYYYNIDQNSVEEKAFISSDKSYGTAV YELGRFVYYSVDKDMLYVMVDGTLYEVNVEKKGKETKEVIVKGLQEGQYVVSDDGHMIAY QSNGKLTEATEIQVINFANGKKRKVTCADGEVVRPLGFVKNDFVYGVARTSDTGKTVSGE TVVPLYKTEIQNGKSKVIKTYEQKDIYVLEAEFDNNMITLSRVRKDGSTYTGIADDYITN NEEKEESNIYLESYVTELKETQYRLTYADGISDKEPKVLKPKQVLFENPTAITFDDVDAA AKCYVYGYGELQGIYEKAGAAIQKANEYNGVVISSRQSYIWERGNRDLQHAITGKDNEIQ SVRERLNAGDAPIEIMNEISKDRGMDYTGCTTEQLLYVINQDIPVIAMLDASTSIILTGY TESTISYVDTASGEKRNASYEGIDEMTQGSGHAYIGYIK >gi|224461044|gb|GG657760.1| GENE 407 433532 - 434683 1028 383 aa, chain - ## HITS:1 COG:FN0778 KEGG:ns NR:ns ## COG: FN0778 COG0500 # Protein_GI_number: 19704113 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 2 376 4 396 412 277 41.0 3e-74 MEEIIKLLNENLNDTFLNAVLSNPRKADGPSKIKVRPVLIKDERMIQLEVFKGNQAFHRN AAMEEAGFIIAEQMENMKQMQLETSEALYTVLISKKGKVTVRRKSRKKEAGPADISHNRK KQYILKEGVAVPFLKDLGVMTEDGKVVNARFDKFRQINRFLEFIEDILPQLDKGKEVSIL DFGCGKSYLTFAMYYYLHELKGYDVRIIGLDLKSDVIRRCNELSEKYGYSKLHFLEGDIA DYTGADKVDMVVTLHACDTATDYALAKAVGWDAKVILSVPCCQHELNSQIKNDVLGPVMK YGLLKERFAALVTDGLRAEYLVSRGYDAQILEFIDMEHTPKNILIRAVKTGRKGENQDTI NICEEFLHVSPALGRLLDEKGEL >gi|224461044|gb|GG657760.1| GENE 408 434766 - 437393 2597 875 aa, chain - ## HITS:1 COG:BH1154_2 KEGG:ns NR:ns ## COG: BH1154_2 COG0642 # Protein_GI_number: 15613717 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 592 863 3 271 274 229 44.0 2e-59 MNQWYKTNLTKGILIVAEHVLAVVAAASLVWVLTYPALMGDLFSGHAAKKFEDSTAFSGQ LQTATTGILEGVNTRGLFETEGRYDPERIVDIKEFYDNDNINNKNSSGLAYRLGDLRKWA ESSPYSDGNIIDDSKEPIIVCKRSDGTFRYYYFAELEQLVNDGELSFVIANNSSGEEVSS DQILYELRNGGRSDVMYSTETEAEFKGLQNREGKIEFIDCWNYDGYQIEEKYAPLGAANL LEIANENPAWNGKLNDVFQMLEGSLYNIYNRTETYESWENSWKEGDTNLVYLYADTVNKK IYTNKEEYKDFSRLDESLKAMAKNGKYLIVKPKLSDFSSNIENEDAATWKDLVRFSGPAK ENFVYAVGVDTSYPIQDSFYSQNKIYEKYGSRIQGIAILGLTSAILFMVGIVWLTIIAGR NNRDEELHLNWFDRWKTELAAALVIMLWIGPVLFVGSGISQYFAGQVPDYSDTYAMAVYS YNAIPGVVRSGIVAAYTCGLFLIGYMSLVRRIKTRTVWSNSIIKSLCSFIKQLFVNMHFV WKTVILFCLFGFVHWLAVLSGAIVNWFWFLVMLIVEALAFIYLVRMSIARQKIRSGIEHI SSGEVNYKIPLDGLKGEQLMLAERVNSIGEGLDAALEESMKSERLKTDLITNVSHDIKTP LTSIINYIDLLKLEHLEDPKIQRYLEVLEAKAQRLKTLTEDVVEASKVSSGNITLDFMNI NLVEMIQQTSGEFEEKFTQRNLNEVLNLPEEEAVIRADGRRMWRVLENIYNNAAKYAMEG TRVYADLRITDSTITFSLKNVSDQPLNFTADELTERFLRGDVSRSTEGSGLGLSIAKSLT SMQGGSFDLYLDGDLFKVTITFPRVAKAVENVENE >gi|224461044|gb|GG657760.1| GENE 409 437406 - 438101 816 231 aa, chain - ## HITS:1 COG:BH1153 KEGG:ns NR:ns ## COG: BH1153 COG0745 # Protein_GI_number: 15613716 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 4 230 7 232 232 263 61.0 2e-70 MSKILVCDDDREIVEAIDIYLTQEGYEVLKAYDGEEALKVLQSEKVDLLIIDVMMPRLDG IRATLKIREQNNMPIIILSAKSEDADKILGLNVGADDYVTKPFNPLELVARVKSQLRRYT QLGSTVSGDSQAVYEVGGLSINDDLKEVTVDGELVKLTPIEYNILLLLVKNQGKVFSIDQ IYENIWNEDAIGVDNTVAVHIRHIREKIEINPKEPRYLKVVWGVGYKVEKL >gi|224461044|gb|GG657760.1| GENE 410 438627 - 439604 928 325 aa, chain - ## HITS:1 COG:mlr0125 KEGG:ns NR:ns ## COG: mlr0125 COG3757 # Protein_GI_number: 13470422 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Mesorhizobium loti # 1 196 103 297 317 84 27.0 3e-16 MSIHGIDVSQFQGNINWTNVKSTGTQFVMIRAGYGQGNIDPEFTRNAQECSRRGIPFGVY WFSYAYTEEMAKREAEYCIQAVENYEVQYPVCFDFEYASVNYAAGEGVTVTRQLASSLVN AFCSRVEELGYFAMYYSNLDFLNRMFDASLRKKYALWYAQYANEPSASGMAMWQYSDSGS ISGISGNVDQNIAYYDLASVISKAGLNKIKGEVTTPAPSPSSPADVIIYTVKPGDNLSSI AARYGTTYQTLASYNNIENPNLIYAGQKIRIPVGHYETSARYYTIKSGDTLSGIALRFGT TVAELQRLNGIQNPNLIYAGTTIRV >gi|224461044|gb|GG657760.1| GENE 411 439755 - 440099 284 114 aa, chain + ## HITS:1 COG:no KEGG:Closa_3226 NR:ns ## KEGG: Closa_3226 # Name: not_defined # Def: sporulation transcriptional activator Spo0A # Organism: C.saccharolyticum # Pathway: Two-component system [PATH:csh02020] # 3 109 154 263 268 82 38.0 5e-15 MREREIQRLVRTLGIGATYRGYRYLNFGIKLCMQDENYLLSVSKLLYPQIAKKYQATSSS VERDIRTVINVCWERGNRQLLEDISLRPLNTRPTSSVFLDILVHYLRQDCLDKL >gi|224461044|gb|GG657760.1| GENE 412 440437 - 441126 758 229 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01840 NR:ns ## KEGG: EUBELI_01840 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 225 3 227 239 233 56.0 4e-60 MSKLYMMVAITNRSMKYKFQEFYKENDHMVVFGTLGRGTANSAVLDYFGLEASEKMISFS VVTEEMWRKLKRGLIIKMQIDVPGTGIAFTIPLSSIGGKRVLQYLIQNHEYEKEEETILR ETDYELLVTIVNQGCIDSVMDAARGANAGGGTVIHAKGTGMESAEKFLGVSLASEKEIIF IVTRTKDKNQIMKAIMEKTGLDSREKAIVFSLPVTSTAGLRMREDEIGD >gi|224461044|gb|GG657760.1| GENE 413 441138 - 442682 1604 514 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01841 NR:ns ## KEGG: EUBELI_01841 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 5 514 18 525 525 564 65.0 1e-159 MRIHQTKLLEKLQESLGAVLPIIGIVLFLCFTIAPIPTSILMAFIIGAVLLIVGMMFFTL GAEMAMTPMGERIGTRMTRTKNIAVIVLLCFVLGVIITVSEPDLQVLAEQVPSVPNYTLI VAVAAGVGIFLVAAVLRMLFGIPLSYMLIALYPAVFILAYFVPEDFLAVAFDSGGVTTGP MTVPFIMALGIGFSAVRSDKHAENDSFGLVALCSVGPILAVLVLGMIYKPTGNSYTQTVI PDAENSVEMWRLFSSGLLHYMKEMLVSLLPVVLFFVFFQVISLHLKKKTLVKISIGIVFT YIGLFLFLTGVNIGFMPAGNYLGQIIAGLHYRWIIIPIGMVIGYFIVKAEPAVYVLTEQV EELTSGAISGRAMGYSLSIGVAVSLGLAMVRVLTGISILWFLIPGYTAAVLLSFFVPKIF TAIAFDSGGVASGPMTATFLLPFAVGACEAAGGNIVTDAFGVVAMVAMTPLITIQILGFI YQLQEKRSAEQGASEETVPVLPLEAFDDNDIIEL >gi|224461044|gb|GG657760.1| GENE 414 442999 - 443892 899 297 aa, chain - ## HITS:1 COG:CAC0946 KEGG:ns NR:ns ## COG: CAC0946 COG2333 # Protein_GI_number: 15894233 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Clostridium acetobutylicum # 48 296 40 287 320 220 42.0 2e-57 MRNSVILLCLALLLSGCQLKEHVQEYVQEQDGGAADSGEDAQDVSGEMRVTFLDVGQGDC TIVQASGHNMVIDAGNNGQGGKVVSYLEELGIEKLDYFILTHPDADHIGGADDVMENVEV KQIIMPDVSNDTKTYADVEHDIVTMDIPVIDPEVGAAYKLGDASFEILCPSEIKDNDLNV SSAGIKLTHGKKSFVMCADAEAPSEKAMTETFGSGLECDVLKCGHHGSATATSEEFLENT DPVWAVISCGENNRYGHPHAEVISRLEDADVQIYRTDKLGTITAVSDGENISWKSER >gi|224461044|gb|GG657760.1| GENE 415 444140 - 444433 425 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571204|ref|ZP_03780202.1| ## NR: gi|225571204|ref|ZP_03780202.1| hypothetical protein CLOHYLEM_07293 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07293 [Clostridium hylemonae DSM 15053] # 1 97 1 97 97 119 100.0 6e-26 MKEWDVVLVIVVLLNMVLSIYNPISKNQKENTKAMTELTMTIKTISEKMAVYEKDMNALD VKNHESHKRLWDKNEEQDRQIKEHESRIVKLEGNKGK >gi|224461044|gb|GG657760.1| GENE 416 444465 - 444884 419 139 aa, chain - ## HITS:1 COG:no KEGG:Closa_1384 NR:ns ## KEGG: Closa_1384 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 122 1 147 150 76 31.0 3e-13 MDNSLLNEYAAMKAEIKNLRRGISRLKHEIKNPPSLFHKKQEKMMELVMMLESREIEFLD MTIEVERFIETIEKSEMRIMFRLYYIEDYSYIKVADEMNQMFPRRSIAYSDENVKKRIQR YLVNVPQCAERKCRHAGIR >gi|224461044|gb|GG657760.1| GENE 417 444865 - 445053 225 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571206|ref|ZP_03780204.1| ## NR: gi|225571206|ref|ZP_03780204.1| hypothetical protein CLOHYLEM_07295 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07295 [Clostridium hylemonae DSM 15053] # 13 62 1 50 50 75 100.0 1e-12 MSRQRRTRTVCRMDRQDRLRALADHRPDAAAARQFVHKAYESYTVDEYIKSKGMRNIGQQ SS >gi|224461044|gb|GG657760.1| GENE 418 445529 - 445855 363 108 aa, chain + ## HITS:1 COG:BH1288 KEGG:ns NR:ns ## COG: BH1288 COG1396 # Protein_GI_number: 15613851 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 4 107 3 104 112 66 39.0 1e-11 MADFANVLRLLRNGRGLSQQELALSLGISKSAVNMYERGERQPNFETLELIADFFKVDTD YLLGRTNAARTAYPGTVAAHFDTEDLTDDEKKDVENYIEFIKAKRNRT >gi|224461044|gb|GG657760.1| GENE 419 445913 - 446389 558 158 aa, chain + ## HITS:1 COG:no KEGG:CLJU_c31730 NR:ns ## KEGG: CLJU_c31730 # Name: not_defined # Def: hypothetical protein # Organism: C.ljungdahlii # Pathway: not_defined # 4 154 3 151 152 134 47.0 2e-30 MNRYEELLGEAAAEGISIDENYTFSGKTSGLYVDNNIALSSSLKTTDEKACVLAEELGHH HTTVGNIVDLTSSGNRKQERQARVWAYNKQIGLKGLISAYEHKCSNRHDTAEFLEVTEEF LQEALDYYCGRYGTGTIADGYYIMFIPSLMIGKIDFTL >gi|224461044|gb|GG657760.1| GENE 420 446758 - 447219 562 153 aa, chain + ## HITS:1 COG:AGl132 KEGG:ns NR:ns ## COG: AGl132 COG1522 # Protein_GI_number: 15890173 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 9 150 1 145 160 80 34.0 8e-16 MDSLDYQILEKLKSNARQRASEISREVHLSVSTVIDRIRKMEAAGIIKSYTIITDDAKVG NDVTVLIEVSMEHPQFNEDFIENVTANPYVIACYYLTGEFDFLLKVTCKSSEHLEEIHKW VKGRSGVRQTRTHYVLSTIKNIHSSLPAAEEEV >gi|224461044|gb|GG657760.1| GENE 421 447229 - 448110 881 293 aa, chain - ## HITS:1 COG:no KEGG:Sdel_0336 NR:ns ## KEGG: Sdel_0336 # Name: not_defined # Def: hypothetical protein # Organism: S.deleyianum # Pathway: not_defined # 7 281 2 275 278 228 42.0 3e-58 MDSTAKRRTETVEDVVLRYSCRGMHILRTYMDAKFCRKAALKLLSLEKGNILLTTGFYVD GHAETDGPPGTMALAVALRKLGYHPVIVTDKYCRGFFEMENLEVKYMNIDDGRNAYENLL EQYRPAALISIERCGRNEEKDYANMRGASIKSRTARVDLMFEKAAEMNIPTFGIGDGGNE IGMGNLKEVIRAKLSLVPCEVEVDTLVISTVSNWGAYALAAYMQQIKKIRLLPKFKEIKK YLEAIVKMGSVDGVTKQQTLSVDGFPLEVEKEILDALNRTALLAEEEEERKAG >gi|224461044|gb|GG657760.1| GENE 422 448123 - 448893 942 256 aa, chain - ## HITS:1 COG:Cj1541 KEGG:ns NR:ns ## COG: Cj1541 COG1540 # Protein_GI_number: 15792849 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Campylobacter jejuni # 1 248 1 248 255 295 57.0 8e-80 MYTVDLNCDLGESFGNYKCGMDEEVIPYISSANVACGFHASDPVVMAKTVALAKESGVCI GAHPGYPDLAGFGRRNLDASPEEVKAMVQYQVGALHAFCTAQRVRLCHVKPHGAMYNMAC RDQALAEAVCEGIFEVDPGLILLGPAGSQLLNAAEAFGLTCAREVFADRAYEEDGSLVPR SRPGAMITDEDEAITRVIRMVKDKKVTAVTGRDIEVTADSVCVHGDGPKALAFVVKIREA LKIENIQVVPFGKLDG >gi|224461044|gb|GG657760.1| GENE 423 448910 - 449698 718 262 aa, chain - ## HITS:1 COG:BS_ycsI KEGG:ns NR:ns ## COG: BS_ycsI COG4336 # Protein_GI_number: 16077475 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 7 260 1 254 257 329 59.0 2e-90 MTDYYDMSPQKARKLVRSGRITGPTSGMCAGYAQANLVILPRELAYDFLLFTQRNPKSCP VLEVSDTGSRQLRYLAQDADIATDFPRYRIYKKGELAGEYTDVEKFWRDDFVSFLIGCSF SFESALLDAGVPVRNIEENCNVPMYKTNIACTPAGIFCGSMVVSMRPLPREQVAEAVLVT GEMPRVHGAPIHIGDPEAIGITDITRPDFGDSVTVREGEVPVFWPCGVTPQNVVMNVKPE IVITHSPGHMFITDVKNAELKY >gi|224461044|gb|GG657760.1| GENE 424 449695 - 450603 876 302 aa, chain - ## HITS:1 COG:FN0436 KEGG:ns NR:ns ## COG: FN0436 COG1984 # Protein_GI_number: 19703774 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Fusobacterium nucleatum # 1 294 1 296 336 277 48.0 2e-74 MPVRIVIPGAFTTVQDAGRYGYQCFGIGPSGVMDEKAYADAGYLVGNEANEAVLEAALFG GVMEFTEDTVVAVTGADMEPKLNESPISMNTPIQIKASDSLSLGMVKTGCRTYIAFAGGI DVPAVMGSRSTNVKCRLGGYEGRALKAGDELPLGTGKSYEEVKGRKIKAQEYPSEINVRV IPGPQDDYFTEEGKKTFYSGVYTISEQSDRMGCRLDGPVIESRNGTDIVSDAIALGSVQV PADGRPIVLLADRQTTGGYAKIATVCSFDIPKIAQGKPGDKVKFTAISGAEAERINRKQV GR >gi|224461044|gb|GG657760.1| GENE 425 450594 - 451328 751 244 aa, chain - ## HITS:1 COG:FN0437 KEGG:ns NR:ns ## COG: FN0437 COG2049 # Protein_GI_number: 19703775 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Fusobacterium nucleatum # 4 239 18 254 262 204 39.0 1e-52 MREVKFLRAGDRAMTVEFGRTVDPKINDQVHALAAKLRKENMTGIRELVPAFRSLTIYYD PLETSFQAVRQNILSYGDISQEGGAVKKRIWKIPCCYGARFGCDLADMEAFTGLDRDEII AIHSSVDYKIYMMGFLPGFVYLGGLDKRIEMPRLKTPRVKILPGAVGIGGSQTGVYPVAS PGGWRLLGGTPVEFYDPGRKEPVLCKAGEYIRFVPITINDYYDIRRMVSKGEYEPEVEEE SICQ >gi|224461044|gb|GG657760.1| GENE 426 451346 - 452203 851 285 aa, chain - ## HITS:1 COG:CAC0792 KEGG:ns NR:ns ## COG: CAC0792 COG0115 # Protein_GI_number: 15894079 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Clostridium acetobutylicum # 1 278 1 279 280 383 62.0 1e-106 MKTLGYYNGRFGELDEMTVPMNDRVSWFGDGVYDAGPSRNYKIFALDEHIDRFFNSAGLL KIQMPVTKKELKELLQEMVDKMDTGDLFVYYQVTRGTGIRDHVFTEGPGNLWIMLKPAEI SDGKEPIRLVTMEDTRYLHCNIKTLNLIPSVMAAQKAKEAGCQETVFYRPGGRVTECAHS NVHIIRDGILVTAPTDNLILPGIARAHLIKICRQLGIPVNEAPYSLDDLYNAEEIIVTSS SNLCLHADEIDGKAAGGRNPELLEKIRAALLQEFYDATPAEQREK >gi|224461044|gb|GG657760.1| GENE 427 452370 - 453320 1027 316 aa, chain - ## HITS:1 COG:PA3301 KEGG:ns NR:ns ## COG: PA3301 COG2267 # Protein_GI_number: 15598497 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Pseudomonas aeruginosa # 5 307 6 304 316 202 34.0 7e-52 MKNDFYYPSSDGRTNIHAVEWVPKQEIKAVVQICHGMVEYIERYDEFAAFLTERGIYVTG HDHLGHGKSAADEESLGYFDETNGNKYVIADIHRLRELTQEKYPDVPYIMLGHSMGSFLL RQYLTSYSRGLACAVIMGTGCQGSALLAMGRILCRIIALFKGWKHRSVLVNNLSFGSYNK RFEPGDTPKDWITSDKEKCASYVSDPLCSFVFTVSAYYQMFAGMKVLTKKANMEKINKDL PLLLVSGADDPVGDFGKGVKKVYGQLREAGIRDVSMKLYDGDRHEILNETDREQVYEDIY RWISEKIAKDKGGNEK >gi|224461044|gb|GG657760.1| GENE 428 453406 - 454776 1527 456 aa, chain - ## HITS:1 COG:L67186 KEGG:ns NR:ns ## COG: L67186 COG0372 # Protein_GI_number: 15672652 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Lactococcus lactis # 26 456 13 441 441 506 56.0 1e-143 MTKNVEHALFEITPEIQQLAQLCEDNNAIEKELYTKYEVKRGLRDVNGKGVLAGLTNISD VCAKKIVDGEEVPCAGNLYYRGYNIKELVKGFLEAKHYGFEEISYLLLFGELPTEKQLAA YHETLVERRTLPPNFVRDVIMKAPSRDMMNSLSRSILSLYSYDAKADDTTIPNVLRQCLN LISQFPMLMVYGYHAYNYRLGEDLFIYAPSPELSTAENILMMLREDRKYTKLEAKILDMA LVLHMDHGGGNNSTFTTHVVTSSGTDTYSTIVAAMASLKGPKHGGANIKVTQMFEDMKQK LTDWKDEDAVRQYLCDLLDKKAFDQKGLIYGMGHAIYSVSDPRADIFKKFVKQLAKEKGF EEEYALYEMVEHMAPDVIGEKRRIYKGVNANVDFYSGLVYSMLDLPPSLYTPIFAAARIV GWSAHRLEELKNVDKIIRPAYKPLAPHRDYIKMDDR >gi|224461044|gb|GG657760.1| GENE 429 454848 - 455723 1001 291 aa, chain - ## HITS:1 COG:CAC2986 KEGG:ns NR:ns ## COG: CAC2986 COG0030 # Protein_GI_number: 15896238 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Clostridium acetobutylicum # 11 287 5 275 276 275 50.0 7e-74 MRKPTLGNPQNTIEILQKYDFSFQKKFGQNFLIDTHVLDKIIRAADITKEDMVLEIGPGI GTMTQYLAEAAGKVVAVEIDKNLIPILTDTLHDYDNVTVINEDVLKLDVRELAREENGGR PLKVVANLPYYITTPIIMGLFENDVPVESITVMVQKEVADRMQTGPGNKDYGALSLAVQY YAEPYIVANVPPNCFMPRPRVGSAVIRLTRHEKPPVEVKDEKLMFDIIRASFNQRRKTLA NGLNNSDKLSLAKEELIEAIERLGKGPGVRGESLTLEEFAELSNYIYALNR >gi|224461044|gb|GG657760.1| GENE 430 455760 - 456539 710 259 aa, chain - ## HITS:1 COG:CAC2989 KEGG:ns NR:ns ## COG: CAC2989 COG0084 # Protein_GI_number: 15896241 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Clostridium acetobutylicum # 1 253 1 253 253 251 51.0 9e-67 MIFDTHAHYDDDQFDEDREELLGSMQAGGVGTIVNISASPRSCREVVDLARKYPFMYAAV GIHPDHVGDLNEDFFKEMEKLLADRKVVAVGEIGLDYYWDNESHDLQKFWFIRQLELARR HDLPVVIHSRDAAADTLEIMKEHAQGLKGIIHCFSYSRELAREYVKMGFSIGVGGVVTFK NAKKLREVVEDTPLTSIVLETDCPYLAPEPNRGKRNNSLYIRYVAEEIARIKNVDYDTVV KQTESNASELYGISDNFVV >gi|224461044|gb|GG657760.1| GENE 431 456653 - 457639 900 328 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2659 NR:ns ## KEGG: Cphy_2659 # Name: not_defined # Def: diaminopimelate dehydrogenase (EC:1.4.1.16) # Organism: C.phytofermentans # Pathway: Lysine biosynthesis [PATH:cpy00300] # 4 328 3 328 328 461 67.0 1e-128 MDKIRIGIVGYGNIGKGVELAVARNEDMELKAVFTRRNPADVKIETESADVKHMDDLASM KDEIDVIVLCGGSATDLPVMGPEIVKNFNTIDSFDTHARIPEYFENVDKAAKDGGNVGII SVGWDPGMFSLNRLYAESILVQGSTYTFWGKGVSQGHSDAIRRIEGVKNAIQYTVPVDKA VERVRSGEALELTTREKHLRDCYVVPEEGADLQEIERTIKTMPNYFDDYDTTVTFITEAE LKQNHSSMPHGGFVIRSGETGTEGSRHIIEYSLKLDSNPEFTASVLVCYARAAYRLSKNG ESGAKTVFDIPPALLSMKTPEQLRAELL >gi|224461044|gb|GG657760.1| GENE 432 457758 - 459650 1882 630 aa, chain - ## HITS:1 COG:CAC2991_1 KEGG:ns NR:ns ## COG: CAC2991_1 COG0143 # Protein_GI_number: 15896243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 2 511 3 523 536 636 59.0 0 MEKQKYYITTAIAYTSGKPHIGNTYEIVLADAIARYKRSRGYDVFFQTGTDEHGQKIELK AEEAGVTPKEFVDGVAGEIRRIWDLMNTSYDKFIRTTDGYHEKQVQKIFKKLYDQGDIYK GHYEGMYCTPCESFFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRLIDHINSHPE FIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITGIGY DCGGDNTEQFRKDWPADLHLIGKDIIRFHTIYWPIFLMALDLPLPKQIFGHPWLLQGDGK MSKSKGNVLYADELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNLV NRTISMTNKYFGGTVTDKGVAGEADADLKAMTESAPKAVEGKMDELRVADAITEIFNLFK RCNKYIDETMPWALAKDEEKKDRLETVLYNLQESIKAGAVLLEPFMPETSGKILGQLGDG KVTEKPEILFARLDLEEVLEKVEALHPAEEEVPENVIDIKAKPEITFDDFGKMQFQVGEI LECEEVPKSKKLLCSKVRVGSEIKQIVSGIKAYYKPEEMVGKKVMVLVNLKPAKLAGVLS EGMLLCAEDAEGNLALMTPEKEMPAGAEIC >gi|224461044|gb|GG657760.1| GENE 433 459900 - 459992 76 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLYREVLNRERSRIRPGLHAGMLRGMDED >gi|224461044|gb|GG657760.1| GENE 434 460220 - 461938 1410 572 aa, chain + ## HITS:1 COG:XF0221 KEGG:ns NR:ns ## COG: XF0221 COG4805 # Protein_GI_number: 15836826 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 79 566 87 594 613 121 22.0 3e-27 MRKKISLLLTVTLLFALAALASCSRGSKSADAEFEAYTDNLFCQEVSSNTISLHYTLENP SDYGIDKAPVSFGSCSTDTAAISASAENALASLHAHNRAQLSDKNKLTYDILDNYLSTSL DEAGYVLYDEPLAPLTGTQAQLPVLLSEYQFNSTGDIDTYLTLMTKLPEYFESIIAFEQA KSEKGLFMASYSADDIIDECNAFIKMGDDNYLYSSFTERLDAMKLDKADYDDYVKRNREN MKEYIYPSYKKLADSLKALRTTGKNNNGLCYLPDGRDYYELVVKRETGSSRTVNELKELT QSQILEDLTAMQQILTSSSKETFSNAAPSLEDTDPTSILSNLKSKLKGSFPDPPDVSTEI KYVQKSMEEYLSPAFFMVPAIDSTTNNVIYINQGHMPDDLSLFTTLAHEGYPGHLYQTVY FQNLKPDPIRNLLNFGGYTEGWATYTEMLSYYYALLPKEQAALLQRNTSVILGLYALADM GIHYDGWKLADTVSFFRQYGIEDANTVESIYDLIISDPANYLKYYIGYVEFMELKKEAID KWGDSFTQENFHKKVLTAGPAPFDILRTYMFQ >gi|224461044|gb|GG657760.1| GENE 435 462108 - 462635 667 175 aa, chain - ## HITS:1 COG:CAC0470 KEGG:ns NR:ns ## COG: CAC0470 COG0700 # Protein_GI_number: 15893761 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Clostridium acetobutylicum # 6 175 3 172 173 126 42.0 2e-29 MRLFMYISDFIVPLVIFGIVSYGVLMKVNVYDTFVKGAKSGFFTVIKIMPTLIGLMVAVG ILRASGFLGFMSGIIGKATEYIGFPGELVPLTVVKMFSSSAATGLLLDAFKEYGTDSYIG LIASISMSCTETIFYTMSVYYMTAKVTKTRYTLSGAMFATFAGLVASVVLAGMMG >gi|224461044|gb|GG657760.1| GENE 436 462776 - 464134 1181 452 aa, chain + ## HITS:1 COG:lin2873 KEGG:ns NR:ns ## COG: lin2873 COG0534 # Protein_GI_number: 16801933 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 7 442 8 439 450 246 32.0 5e-65 MNSKNDFGQGSVAGNIMRLAIPMTLAQLINVLYNVVDRVYIGHIPHTSTEALTGIGLTLP VITIITAFANLFGMGGAPLFSMARGRGDRERARKIMANSLSMLLLSGILLMALCYIFKRP LLYLFGASDVTFPYANSYLTVYLCGTLFVMTSLGMNNFINAQGFGVTGMLTVSIGAVLNL LLDPLFIFVLHMGVQGAAAATVISQFVSAVWVFCFLTGQKAVIRITGKYMRPEAALVKEI TGLGLSGFIMAVTNGSVQIMCNAALQRYGGDLYVGIMTVINSVREIVTMPVNGLSSGAQP VMSYNYGAEKYDRVRSAIRFSTICSILFSTTAWALSFFFPHFFIHLFSSESELIREGVPA MRIYFFGIFMMALQFAGQSVFVALGRSKQAVFFSLFRKAVIVIPLTLLLPALGGLGTDGV FLAEPVSNFIGGTACFVTMMLTVWPALRKSQT >gi|224461044|gb|GG657760.1| GENE 437 464665 - 464904 186 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571227|ref|ZP_03780225.1| ## NR: gi|225571227|ref|ZP_03780225.1| hypothetical protein CLOHYLEM_07316 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07316 [Clostridium hylemonae DSM 15053] # 1 79 1 79 79 126 100.0 4e-28 MFNHPEIGLYLDPATGLQIFGDIRGIDTIGTNVSVHDYPFLVNLTAPQTDFTALQILGQQ ASDQAQQANAPARVTRFLT >gi|224461044|gb|GG657760.1| GENE 438 464905 - 466041 1369 378 aa, chain - ## HITS:1 COG:BS_yaaN KEGG:ns NR:ns ## COG: BS_yaaN COG3853 # Protein_GI_number: 16077094 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tellurite resistance # Organism: Bacillus subtilis # 29 377 30 383 386 228 41.0 1e-59 MEKEFEQFQTTPVLTLEPFQEERQTAVPVRQEEAQVFDESILTEEEQKAVDAFAEQIDLT NSSVILQYGVGTQKKMADFSENALENVKTKDLGEVGELLSGVVKELKSFDEEEDKGFFGN IFKKTSNKITAMKAKYARAEDNVNQICKVLENHQVQLLKDVAILDKMYEVNLTYFKELSM YILAGKKKLREVRESRLPELMDKAQRSGLPEDAQAAKDLDSMCNRFEKKIHDLELTRTIS IQTAPQIRLVQGNDTLMVEKIQSTIVNTVPLWKSQMVLALGVEHSAQAAAAQREVTDMTN ELLRKNAQKLKMATVETAKESERGIVDMETLKITNESLISTLDEVMQIQQNGRLKRREAE QEMMRLESELKEKLLQMG >gi|224461044|gb|GG657760.1| GENE 439 466091 - 467335 1352 414 aa, chain - ## HITS:1 COG:no KEGG:ELI_1359 NR:ns ## KEGG: ELI_1359 # Name: not_defined # Def: 5-bromo-4-chloroindolyl phosphate hydrolysis protein # Organism: E.limosum # Pathway: not_defined # 1 414 1 398 403 232 35.0 2e-59 MTNWDWERFGDDIRRTVQDAVDSRNFDKLNQTINDTIYQAVDGIGKGVRSAGDAVDRSMQ DMARRRGQTRYGRMRRDRPYPGQYSRPESDTYDVHTEQVPALYVRTGGAKAGAVIMAAVG YVLGGVLLVGLPLSLLRELAGGSFNMVFQLLFGAGVIVLAGSAVLAAAGHHILGKVKRFN AYIKGMEGREYGDIKALAEQVKKPPKYVARDLEKMIRKGWFRQGHLDRQRTCLMVTHRAY SQYEELMEHTEELKRQEQERKAQKEETAEHMDPQIREIVRTGDEYIKKIHECNDAIPGAE ISYKISRMETLVDRIFDRVEQNPGCVPEIRRLMEYYLPTTVKLLEAYEELDAQPVQGENI LSSKQEIEKTLDTLNAAFEKLLDSLFQDTAWDVSSDISVLKTMLAQEGLTKDDF >gi|224461044|gb|GG657760.1| GENE 440 467462 - 468721 1700 419 aa, chain - ## HITS:1 COG:BH3820 KEGG:ns NR:ns ## COG: BH3820 COG1301 # Protein_GI_number: 15616382 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Bacillus halodurans # 10 406 1 401 413 276 47.0 6e-74 MNTQKEKKKVSLTVWILAALILGIAAGLLLQKNSDIAETYIKPLGTIFLNLVKMVVVPVV LFSIMQGVISLQDIRKVGSIGGKTVLFYMCTTAFAVTLGLVIANVLNVGSGYTLSSESLE AFEGVSETPSFIDTIVNIFPSNAIQPLAEATMLQIIVIALFFGFGIILAGEKGKMAGAVV ESFSEVCIKVMGVIIKLSPIGVFGLITPVIATNGMAILLPLMKLIGVVYLVCLVHMVLVY SSLVKAMARMNPLTFFKGMGEAMIFAFSSASSVGTLPFNMECTQKLGARKEISSFVLPLG ATINMDGTAIYQGVSVIFISQIFGMNLTLSQQITIILTATLASIGTAGVPGSGVIMLAMV LQSVGLPLEGIALVAGVDRILDMARTTVNITGDAACTICVDASEKRRELKKGAALGGNG >gi|224461044|gb|GG657760.1| GENE 441 468737 - 469438 734 233 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0216 NR:ns ## KEGG: HMPREF0868_0216 # Name: not_defined # Def: DNA-binding helix-turn-helix protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 7 228 14 242 243 116 32.0 9e-25 MAIDENVGKNIKKYRLAYKLTLEELAKKIHKSKSTMSKYEKGLISLDVATLEEIADVFQI SPAYLLAVQDEELHSRLEPGEFLDRQYMYSYDGRSRHILKSVMERYQIPGSEQIGIQLFY DVQDEESCGNCKTFYTGYSRRYEFVENYNLQNQNNPTEQAWICCINSLNRTSRRTGMLTG LSYKTMMPVAIKVMLSAAILKEDDELIASLLLTREDIRISRKYNLFTIDQFME >gi|224461044|gb|GG657760.1| GENE 442 469652 - 470968 1180 438 aa, chain + ## HITS:1 COG:ECs0451 KEGG:ns NR:ns ## COG: ECs0451 COG1114 # Protein_GI_number: 15829705 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Escherichia coli O157:H7 # 7 430 8 434 439 200 31.0 5e-51 MKKTERKNILIIGFAIFAMFFGAGNLIFPPYLGLMNGKSWFLSFLCFILMDIGLSLLTLL VVTRIGRGTEGITEKLGRLPSILILSLNAICLGPLIAIPRTAATAYEFSVAPFFPSFDTK IFSLVFFLVVVLFCLRQSKVIDIIGTFFAPLILAALLFLIIKGIVSPLGAIELESAAHAA VRDGINAGYQTMDVMAAMIFSASILLTIKQKGYKDTRSQFKIISASGLLATLILFVVYGG LAYLGATVCAQFPADIDRVALLIAIVKALLGEKGMVLLGALVCAACLTPAIGLLSSSASF FEKQTKGRISYRAFVFGFAGISYVISNFGITRILALASPILNILYPVLVLLVFMGLAEKW LPNTAVYRLAAFGTIVVSTLSTVSAYLPVPVNIAALPLYEYGFQWVLPAAAFGLTGYILT KEKPARGRRIFGNIVVRT >gi|224461044|gb|GG657760.1| GENE 443 470965 - 472356 921 463 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 7 462 3 442 456 359 40 1e-97 MTMMEYIKQVNDVLLDFIWGRGMLIIFLSVGLLFTVRTGFFQFRKWRVWLGMTLGQLFRN RNVRRTDDAQSMSQFQAFCTALAATLGTGNITGVATALIAGGPGAIFWMWVSAVVGMMTM YAENVLGILYRYKNKSGKWVGGAMVYMERGLGCKWLAVLFAVFCIFASLGMGNMTQANAM AGGLKEAFYVPTFVTGFAAMVLVGMVLFGGVRRIATVTERLVPVISLFYIAGGVIVLAAN ASEIPKAFQLIFTEAFNIQSVGGGVLGYGMRQAMKTGISRGVFSNEAGLGSSVMAHAASD IDSAPVQGMWAIVEVFIDTIVFCTVTALVILTSGVYDQQGFLANIARGVENVDGTTLCGR AFATVIPGGDKFLALSMIFFAFATIVGWAYFGERTFAYLFGERSAIVYKVIYIVMLLPGC VIAPGLVWEIADTFNGFMAVPNLTALILLSGQVVRVTKEYLRN >gi|224461044|gb|GG657760.1| GENE 444 472364 - 472990 697 208 aa, chain - ## HITS:1 COG:BH1574 KEGG:ns NR:ns ## COG: BH1574 COG2715 # Protein_GI_number: 15614137 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for spore maturation in B.subtilis. # Organism: Bacillus halodurans # 1 199 1 181 197 167 44.0 1e-41 MLNYLWAGMILLGIIFAACTGRMPDVTNAAIDSSKEAITLCITMMGVMSFWVGLMEIATK AGIIKSVSKRMRPIIRFLFPRLPIDHPAVEHITTNMIANILGLGWAATPAGLKAMDSLAE LERERGNPEYQDKKRLLGGVSKGRTASNEMCTFLIINISSLQLIPVNIIAYRSQYGSVNP AAIVGAAIVATGVSTLAGIIYAKLMDRK >gi|224461044|gb|GG657760.1| GENE 445 473217 - 474176 380 319 aa, chain - ## HITS:1 COG:lin1838 KEGG:ns NR:ns ## COG: lin1838 COG1609 # Protein_GI_number: 16800905 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 317 1 317 321 363 58.0 1e-100 MVGIKDIAKTAGVSISTVSYALNGSNKVTEETRQRIEQIAAELNYVPNMAARTLKRQQTN IIAVYISDYGGSFYSELMEGIKQGLNAFDYEIIVCSGQKSHLFLPERMVDGGIILDWTFK NEEIINFADRGHPIVVLDREIENKNICRVLLDNKAGATLAIEQLVAARTDKVYLVSGPKK GFDSIQRLEASVTELNRYHIDFEVIVGDFTQESGYHAAYQIMERKPQFPIYIFSFNDEMA IGIYRYFTERGKIIGKDVRIIGFDNTDIGAYITPRLATISYSKHRWGLVAAEKIVQLIEG KKAADEVICTTYIQGESFR >gi|224461044|gb|GG657760.1| GENE 446 474189 - 476414 458 741 aa, chain - ## HITS:1 COG:lin1839 KEGG:ns NR:ns ## COG: lin1839 COG3459 # Protein_GI_number: 16800906 # Func_class: G Carbohydrate transport and metabolism # Function: Cellobiose phosphorylase # Organism: Listeria innocua # 1 727 350 1069 1086 629 45.0 1e-180 MSGIFNSQIALGNTSMNKLLSNSRNALNVQKLSGQRIYLKAQDEWQLLTMPSAFEIALNS ATWYYKLVDDMLTITTYCLSDAREIRTEISSQSGRLYDFAITNHIIMNAEDESPEYEMTE EQDYIKITAAGKSSIAKKYPDLTYYFKPDVPYQLKSENMFGVDTEVPELMVLLIEKQPKV TVRIQGSITGEAFKEYSTSHFKEDSAYVKHIDDLLNGLELEHPVQPVGHINILTRWYTQN MLVHYLSPHGLEQYGGAAWGTRDVSQGPAEFFMAVNRPDIVRSIIKVVYGNQFFDDGNWP QWFMFDHYEEERADESHGDIIVWPLKMAADYLEKTGDDQILYEQIAYTDRDTYHKTELSE SLFEHMKKQISYIEDNFLPGTCLSCYGDGDWDDTLQPYDPNMKKNMASSWTVALTYQTVI KLGQVLKESGNSYGGYLIGLASKIKGDFRRYMLATGTLPGFVYRESEDKLQLMIHPQDRK SGIKYRLLPMTRSIIAELLTEEEARHHYKIIKDHLEYPDGVRLMSRPAEYHGGVCTYFKR AEQAANFGREVGLNYIHADIRYAEAMAKMGIGEAAWRTMENINPIQIRHRVPGAMLRQAN AYFSSSDGNFKTRYEADQKFEQLKDGTIGVKGGWRIYSSGPGIYLNQLISNLLGIRVNVD SVIFDPILPDALSGLTIHYRIFSQKVKIVIHSDRQKRKIVIAGKEVPFLEQVYAYRSGGM ILNREVLEQCLDSSDIIEIYC >gi|224461044|gb|GG657760.1| GENE 447 477507 - 479657 428 716 aa, chain - ## HITS:1 COG:lin1840 KEGG:ns NR:ns ## COG: lin1840 COG1472 # Protein_GI_number: 16800907 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Listeria innocua # 1 707 1 712 723 627 46.0 1e-179 MKQDGLVRLLESMTMDEKINQLIQLAATFYSEDSKENTGPIREVGLTEENVWNAGSILGQ SGAAESIKIQRKYMEKHRLGVPVLFMADVIHGFRTIFPIPLALGCSWDLEMAEKVAEISA REASVSGVHVVFSPMADLVRDPRWGRVMESTGEDPLLNSFFATAFVKGYQGKDPGKEPER VAACVKHYAGYGAVSGGREYNTVNMSERQLRESYLSAYHAAIEAGVKVVMTSFNTVDGIP ATGNAWLLRRLLREEQKFEGIIISDWGAVEELTVHAVAKDRKEAALLALKAGVDIEMMTS CYAHHLEELAAEEPSLETLLDQAVMRVLKLKNDLGLFEDPFRGADPEKEERIVLCQEHRQ VAREAALKSIVLLKNDGILPVKEGVQVAVIGPGAASKDILGAWSWQGRTQEAVSMIEGAK KIDPKILTGSEPFDYIAPSAKAVSEAVQLAERSEVVILALGEPAWMSGEAASRSDIRLPE SQLEFFRKVRKINKNVIVVLYNGRPLDLQGINDANGIVEAWFPGTEGGHALAEVLWGKFN PCGRLCMSFPEQAGQLPIYYNADNTGRPAGISAEPKYISKYLDVANEAKYAFGFGLSYSE FHYGQLVLDKNVLASDGRISATIEVENRSKADGLETVQLYIRDLVGEVVRPIKELKDFRR LALPAGQKCKVTFTIEESMLRYFHSDQSFTSDAGEFDVMIGPDSANLTTQRFRLIK >gi|224461044|gb|GG657760.1| GENE 448 479676 - 480506 246 276 aa, chain - ## HITS:1 COG:lin1843 KEGG:ns NR:ns ## COG: lin1843 COG0395 # Protein_GI_number: 16800910 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 1 276 1 276 276 344 67.0 1e-94 MNKRTRAAVFCKTVLAVILMLGALVWILPFVWMILSSFKTDLEIMQFPPSLIPENPIWDN FKDLFQSFDFLLYLKNTLIVVVCSFGGMLLNAMAGFGFAKYKFKGRETLFYLVLATMMIP GQVIMIPVYLIMNGLGLTNTMPGIVLPGLVGAYGIFLFRQFISNISDELLAAARIDGASE WYIFTRIILPVSKPILAVQGITTFIGGWNSFLWPLIMANEEKLYTLSVGLQLLKGQYTTN YALQMAGSSFMVVPIVIVFIFLQKYILQGYNVSGNK >gi|224461044|gb|GG657760.1| GENE 449 480519 - 481403 321 294 aa, chain - ## HITS:1 COG:lin1842 KEGG:ns NR:ns ## COG: lin1842 COG1175 # Protein_GI_number: 16800909 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 7 291 10 294 297 311 70.0 6e-85 MKKTKAPYFFIAPALILLLLFSIIPIFVALIISFTDMSLVGLADWSKINFTIFENYKEIA ADPVFWQSIKNTLFYVILGVPLIIVLSMLLALAINYGDNKIFLLFRIIFYTPAITNVVAV AIVFSYLYNADFGFLNYLLSLFNMDHVPWLNDPVTAKVSMVILGVWRAVGANMLIFLAAL QGIPKELNEAASLDGANRFKQIWHITLPSLSFSIFFVTVTTLIGWLQFFEEPFVMTKGGP LDGTTSIALFIYRNGFQYSKFGYAAAGSFILFIAIIVITMIQFRIQKKNEEVGF >gi|224461044|gb|GG657760.1| GENE 450 481474 - 482718 598 414 aa, chain - ## HITS:1 COG:lin1841 KEGG:ns NR:ns ## COG: lin1841 COG1653 # Protein_GI_number: 16800908 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 23 414 21 414 414 457 56.0 1e-128 MKLLKKIGLFTLSATLMIGGLSGCAADSKKSGNEKGQVLKIWGMGEEVKQLSKMTDKFTE ETGIEVDIQSIPWANAHDKLLTAVASKEGPDVLQMGTTWMAEFQEAGALTDLTEYMKDSD TMNPENFFEGSVNTTLFDGKYYGVPWAAETRVLYYRTDLLADVGYPEGPKTWDELEDAAK KLTERGEGKYGISIDANEQSLGFMFARQNGSALIKDNKPLFDQPEFVEGIGFLTGLIEKG YAPKQNLGIEVNQSFSGDAILPMFISGPWMAKTINDTVPDVEGKWAVALLPAKENNISSM GGSNLTVFEHSKMKEEAVKFIEFMSRSENQIEWMKLTNALPVVTAAWDSEDFNDDFYKVL REQLDNSEPMPLIPEFEEIAQTYLKHFEQVVVGGADLQQEMDSFNEKAEALLNK >gi|224461044|gb|GG657760.1| GENE 451 482966 - 483703 839 245 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571242|ref|ZP_03780240.1| ## NR: gi|225571242|ref|ZP_03780240.1| hypothetical protein CLOHYLEM_07331 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07331 [Clostridium hylemonae DSM 15053] # 1 245 7 251 251 508 99.0 1e-142 MKNEKIKLIMQKRGFTFEDLAWLSGVPYSTLTKIGSGATENPGFAAMERIAKVLDCSLDE FTDREPMVPYDYADYVYRFKKLPDNMKEYIKYTIDSEYDQMIHSASSEKIKIKCFEFTNI VGGLAQYDSRIERDIMVSSNEISRACTFCVYLSTHVLFPKFPEGSLLGFRYDDDYDPKNG EIWIIMRGGFLFMGRVYKRNRDIYVKALNGTIDHWHINSHTQYKRIGRLVGVLREGEVDM PEDVR >gi|224461044|gb|GG657760.1| GENE 452 483837 - 484205 305 122 aa, chain + ## HITS:1 COG:no KEGG:Clocel_1943 NR:ns ## KEGG: Clocel_1943 # Name: not_defined # Def: sporulation transcriptional activator Spo0A # Organism: C.cellulovorans # Pathway: Two-component system [PATH:ccb02020] # 6 115 150 260 271 84 38.0 1e-15 MTDNIYTWTPIDIRLNRRLTLLLNRLEISPKLKGYLYLKCALSLCINDTEYLTGITKKLY PFIAGNYNTSAAAVERAIRTSIDILWHSHARMTYQELTNCFSDERPTNAQFIALLTHTIL FL >gi|224461044|gb|GG657760.1| GENE 453 484365 - 485600 1600 411 aa, chain + ## HITS:1 COG:BS_yjcL KEGG:ns NR:ns ## COG: BS_yjcL COG5505 # Protein_GI_number: 16078255 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Bacillus subtilis # 12 407 4 390 396 347 48.0 3e-95 MWGHIFDLSNPLVGKDNTWVLWAICATGAAAAIYLEQRYKWAAKMTGAIIALIFAIVLSN FGIIPMDAPVWDVVWGFVVPLSIPLLLLQCDMRKIGKDSGRILIIFLIGSVGTACGALLA YTALNKFIPELGGLAGVFTGTYIGGTVNFAALGAAFDVSGEMISAATVADNLLMVLYFFL LIAMPSIGFFRKHFKHPYVDEVEAAGSNLKDNETNASAFWGRKEISLRDIALAAATAFVI VALSNIIATGLGSVIPTSNPFLQIVNTLFGNMYLWITTIAMLCATFAPGFFGNIKGTQEL GTFLIYLFFFVIGVPASVPLIIRNSPLLLVFAAIVVAVNMVFSLVAGKLLKFNLEDIILA SNANIGGPTTAVAMAVSKGWTKLVGPIVLIGTLGYVLGTYFGLIVGSILGI >gi|224461044|gb|GG657760.1| GENE 454 485638 - 486612 977 324 aa, chain + ## HITS:1 COG:PH1026 KEGG:ns NR:ns ## COG: PH1026 COG2355 # Protein_GI_number: 14590865 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Pyrococcus horikoshii # 1 323 12 319 320 177 34.0 3e-44 MNFDAHSDIWTDVTHHYLDGESDIFRKYHYERLKKGQIEGGIFVIWNDPPFDKEPLKRTR QMMEAIAHEEPDCADILKVARSYDDMMKARDEGRMYAFIGLEGLKSIGEDLDLIDEFYQF GARHAGLTWNEENPLATGALGNPERGLTDTGRRAVKKIQDLGMILDVSHLNDASFWDLLR AADGPVVATHSNCRALCNQRRNLTDEQLKELARTGGIVGLNSFNEFVHDVESEQTVGNLV KHLVRMVELMGIDHVGFGFDFSEFLCGDTLSSFSSQANPYTIGLEDASKVPNVIEEMKRV GFSNEEIDKISHKNWHRIIREVIK >gi|224461044|gb|GG657760.1| GENE 455 486669 - 487829 1438 386 aa, chain - ## HITS:1 COG:CAC0730 KEGG:ns NR:ns ## COG: CAC0730 COG0628 # Protein_GI_number: 15894017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Clostridium acetobutylicum # 5 381 4 381 383 231 39.0 2e-60 MEFSKESVKKIRGLIIFTAIVVLCLWEYNKVFDILAFVFHILFPFILGGAIAFVLNVPMN FVERHLFGSDKVRKSKVLSKMARPVSMLIVLLLVFSVIGIVMFILIPQLGRTFANLGESI QAFIPRVQTRAADLFHNNKEVMKWVNDLEFDWNKVMDAGIEFFRSGAGSVLDSTITAAKS IVSGIATFFIAFVFACYVLLQKEKLNIQAKKVLFAFVRRGRAEAALEVFSLTYSTFSSFL TGQCVEAVILGGMFVVSMALFRLPYALLVGIVIAFTALIPIFGAFIGCAVGAFLIFMVDP VKALVFVALFLVLQQIEGNLIYPHVVGNSVGLPSIWVLAAVSIGGSLMGIVGMLIFIPVV SVVYALFREIVYLKLRQKRVEPGSIK >gi|224461044|gb|GG657760.1| GENE 456 487831 - 490365 2668 844 aa, chain - ## HITS:1 COG:FN1022 KEGG:ns NR:ns ## COG: FN1022 COG0474 # Protein_GI_number: 19704357 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 2 843 22 860 862 781 52.0 0 MLTSEQARVNQEKYGFNELAEGKKKSTVRIFLEQFEDFLVIILIFAAIVSGFLGDGESAA VIFVVITINAVLGTVQTVKAEQSLKSLKQLSAPEAKVVRDGVTIRIPSREVTVGDEVILE AGDCVPADGRLLEVASLKADESALTGESLSVEKSLDEVPEGAALGDQTNRVFSGSFVTYG RGTFEVTAVGMETEVGRIARLLKTTSEKKTPLQMNLDDFGRKLSVIILIFCGILFAVNVV RGGSVADAFLFAVALAVAAIPEALSSIVTIVLSFGTQKMAKEHAIIRRLQAVEGLGSVSV ICSDKTGTLTQNKMTVEDYYVDGRRVPAEEIDLSVCDEKQLLVFSMLCNDSVNTDGQEIG DPTETALINIGSRLGVDAGDIRSAYPRRSEIPFDSGRKLMSTLHQIDGRNLVVVKGAVDV LLGRMDAVKTGETVRDMTEEDRLEIERQNMEFSRDGLRVLAFAYKEMKEERSLSLDDEDG LIFLGLISMMDPPREESKAAVSECKAAGIKPVMITGDHKVTAAAIARKTGILKDDSEACE GAVIEDMSDEELRDFVEKISVYARVSPEHKIRIVRAWQEKGNIVAMTGDGVNDAPALKQA DIGVAMGITGSEVSKDAASMVLTDDNFATIVKAVENGRNIYQNIKNSIQFLLSGNFGAIL AVLYASAAGLPVPFAPVHLLFINLLTDSLPAIALGLEPHTKSVMQERPRPMNESILTRKY LLSIGTEGLCIGIMTMAAFYIGYRHGSSALASTMAFGTLCTSRLVHGFNCKSGRPVLFTN RFFNNIYLIGAFALGLVLITGVLMIPGLQGIFKVVTLDMGELLTVYGLALLNLPVIQLMK KIRS >gi|224461044|gb|GG657760.1| GENE 457 490603 - 492522 1718 639 aa, chain - ## HITS:1 COG:slr0302_3 KEGG:ns NR:ns ## COG: slr0302_3 COG2199 # Protein_GI_number: 16331870 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Synechocystis # 469 638 2 178 180 109 36.0 2e-23 MRFRKNGKFEDKTVRRKGHFIHIEKHSGKIIGQTAVLNIAAVFICITALWSVFIHYQTRL GREYNELMQDNLSSYVKAQTVEVNSFHSDVSGTLNAIRSLAETEGAGISGGKLQDYLDTV NKEQSRYSVLYMTLDEFVESAAGGEADRAEKDRIYALLRAGQEVITDVSCKEEYADYRYS IAVPLFGGPGDISGVLCTVADAQELVDTSWKSGDIDVVSSCVVKSDGSFVPLRDSDKQLK PTLEKELKEKKVSGDILVQIEQALAQDKDIFVGALNRKTDKGYYIGISPLGYNDWYIVDF VKENKIYVHSSMLMNQMLQTSMVVLAMIVFAAGMIMWYMITKRRKESLEAKKYMVLAQFS DTIMFQYTYSADTAVISPNAELKFRVNHLESSRYLKENKNLMELHRDDEKMFQDILKTPH NDGEIHAVNMRLVDKCGRYIWCECQYRYVYDGNHPSAVIGKLTDINSQIKREQQLLKKVR LDGLTEIYNKAAGEEIIRRKMAKSRKGLLYILDVDNFKQINDQYGHCQGDKALAHIGGLL KSKFRSDDIVCRIGGDEFVAYMDGTVNRKAAAKKAEDIFKALEECSQEMDFEITVSIGIA ACPEHGSTYEELFNAADKAMYEGKKHGKNQFQIGGNEIL >gi|224461044|gb|GG657760.1| GENE 458 492628 - 493017 475 129 aa, chain - ## HITS:1 COG:BS_ywcD KEGG:ns NR:ns ## COG: BS_ywcD COG2246 # Protein_GI_number: 16080872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 10 127 2 119 127 77 34.0 6e-15 MAKYKKITAYMVFGILTTVVNVAVYYICYQILKIPNIYSTAAAWCMAVVFAFLTNKPFVF ESRNWSQKTVAAEAVRFFGCRALTGVLELALMFLLVDILALQGTVMKIFTNIIVIALNYI AGKYFVFDS >gi|224461044|gb|GG657760.1| GENE 459 493004 - 495541 1775 845 aa, chain - ## HITS:1 COG:BS_yfhO KEGG:ns NR:ns ## COG: BS_yfhO COG4485 # Protein_GI_number: 16077927 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 488 839 449 815 819 65 22.0 4e-10 MKRMQKPTAKTTKSREDMLYLSILMVIPLILYILKIRNGYLAGSEIDWLGQHSVFPDYFR KLFYETKTLFPQFAAELGGGQNIYNFAYYGLFNPLYLVSYALPFVKMTTYIQVVSLLEHM ADGVLCYYWLSSGHFKKRESFYASSILVLAASVTYHSSMQLMFVNYMPFLLLALIGYDRY CKKGKYGLLTLSVFFMILTSFYFAVGGMTALFIYGVTGYQNETDESVGLISSCLRFIKWL WGRFYPALFGCFLSLFYLIPVYFAMTAGRAGHGGITVSKLLIPDIRLHKLLYSGYGMGLT AAALLMLCISIFYKKCREKFMAALLLLMLLFPVFDWLLNGGLYLRDKAFIPFLPLLCWLA AAFFTRLETQALKARQAAAGCILAGALVAVSLLTNSYARQEKYLLFIDFAVCGASVLLSM VCWKKALCAVTLAVMAFLCAGQCTVLKEELVTSADMNKIEDPDIEKAVRSVLHGGFYRTE TRGGYSENKASQNRVLACGQNLTTVYSSISNSYYSEFRNKVLNLSKPSRNSLMADTVDNP IFLRLMGVRYIVGDRAPAGYEKIGQSGSVNIYENKNAAPAAYVTDRIISEDTYSDLSYPE RQLALLGAAVAHTPDTVDDIPVNVKKVNAHISTTVIKGNASYGSVSVDSDMPGDTYLFLE FDVKNNRPSEDVTVTVNGEQNKLSARKAAYYNGNTTFHYTSLLKAGETEFPVKFGKGNYE ISNVRAWTGTAGEEAAAELYRRPAALEVTGAGNVLEGTAESEHGGWLITSVPYDKSFQLY VDGRQQKIRRVNTAFVGVPLKAGAHEIRLVYHAPGRNAGIAAALITAVILGADIIRRKRR LHGKI >gi|224461044|gb|GG657760.1| GENE 460 495408 - 496481 776 357 aa, chain - ## HITS:1 COG:SP1606 KEGG:ns NR:ns ## COG: SP1606 COG0463 # Protein_GI_number: 15901446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 9 317 2 310 320 346 52.0 4e-95 MYRDNKPAVSVVVPCYNEQEVLPLYLQAMQEVIKKMEPVTVEIIFVDDGSADETLKLLKE FHEKDNNYRYLSFSRNFGKESALYAGLKAAEGEYVAVMDADLQDPPEYLPEMYDILQEGE YDCVATRRGDRHGEAKLRSFLSASFYKFINKLSQVQIVEGARDFRMMNRKMADAILSLSE CNRFSKGLFGWVGFRTKWLEYHNVERAAGDTKWSLWKLFKYSIDGILGFSTVPLSMASYG GILFCGAAFCMIVFLVVKNLFWHDPVAGWPAMMCVIFLIGGVQLLCIGISGQYLARAYTE IKNRPIYLLRESSDEEDAKTDGKDNKKQGRYVISLDSYGHPAHTVYPEDKKRISGRL >gi|224461044|gb|GG657760.1| GENE 461 496611 - 496886 111 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFTYSAGIFSILKKTAGTFITKDSCHSHSHERAGIRTPDNLIKSQVLYHLSYTPVYYFH SKENAQSRNRTSDTRIFSPLLYRLSYLGISY Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:26:05 2011 Seq name: gi|224461043|gb|GG657761.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_2, whole genome shotgun sequence Length of sequence - 395440 bp Number of predicted genes - 377, with homology - 362 Number of transcription units - 157, operones - 79 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 1 - 69 61.6 # Asn GTT 0 0 + Prom 2 - 61 72.0 1 1 Op 1 4/0.028 + CDS 255 - 551 174 ## COG0640 Predicted transcriptional regulators 2 1 Op 2 . + CDS 629 - 1642 767 ## COG0701 Predicted permeases + Term 1734 - 1785 -0.6 + Prom 1690 - 1749 9.9 3 2 Tu 1 . + CDS 1793 - 3160 487 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 3206 - 3241 7.4 4 3 Op 1 . + CDS 3290 - 4663 921 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 5 3 Op 2 . + CDS 4660 - 5535 532 ## Cphy_1141 hypothetical protein + Prom 5540 - 5599 5.2 6 3 Op 3 . + CDS 5635 - 7017 1546 ## gi|225571260|ref|ZP_03780256.1| hypothetical protein CLOHYLEM_07355 + Term 7035 - 7069 3.5 + Prom 7073 - 7132 2.4 7 4 Op 1 . + CDS 7170 - 8303 873 ## Closa_3889 hypothetical protein 8 4 Op 2 . + CDS 8313 - 9068 727 ## Clos_0031 D-proline reductase (dithiol) (EC:1.21.4.1) 9 4 Op 3 . + CDS 9100 - 9588 573 ## CLK_1856 PrdE protein 10 4 Op 4 . + CDS 9622 - 10254 735 ## COG4887 Uncharacterized metal-binding protein conserved in archaea + Term 10469 - 10507 6.1 - Term 10261 - 10329 8.2 11 5 Tu 1 . - CDS 10347 - 12548 1553 ## COG0550 Topoisomerase IA - Prom 12754 - 12813 76.4 + TRNA 12740 - 12811 63.7 # Glu TTC 0 0 + TRNA 12869 - 12939 62.6 # Cys GCA 0 0 - Term 12937 - 12972 -0.9 12 6 Op 1 4/0.028 - CDS 13076 - 13516 286 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 13 6 Op 2 40/0.000 - CDS 13564 - 14757 1012 ## COG0642 Signal transduction histidine kinase 14 6 Op 3 . - CDS 14750 - 15436 586 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 15 6 Op 4 . - CDS 15472 - 17832 1988 ## COG3590 Predicted metalloendopeptidase - Prom 17935 - 17994 4.3 16 7 Op 1 . - CDS 18144 - 19562 1356 ## COG0498 Threonine synthase 17 7 Op 2 . - CDS 19555 - 19872 426 ## Nther_1167 hypothetical protein 18 7 Op 3 . - CDS 19847 - 20998 1254 ## COG3949 Uncharacterized membrane protein - Prom 21202 - 21261 6.7 + Prom 21159 - 21218 8.7 19 8 Tu 1 . + CDS 21318 - 22019 852 ## COG1802 Transcriptional regulators + Term 22021 - 22049 -0.1 + Prom 22123 - 22182 6.0 20 9 Op 1 1/0.056 + CDS 22216 - 23562 1274 ## COG0534 Na+-driven multidrug efflux pump 21 9 Op 2 . + CDS 23573 - 24118 422 ## COG1451 Predicted metal-dependent hydrolase + Term 24119 - 24182 24.5 - Term 24109 - 24170 22.2 22 10 Tu 1 . - CDS 24185 - 25357 1082 ## COG0477 Permeases of the major facilitator superfamily - Prom 25596 - 25655 7.8 + Prom 25713 - 25772 7.6 23 11 Op 1 . + CDS 25876 - 27009 1103 ## COG2508 Regulator of polyketide synthase expression + Prom 27080 - 27139 5.7 24 11 Op 2 . + CDS 27168 - 27806 719 ## EUBREC_0179 hypothetical protein + Term 27871 - 27937 30.0 + TRNA 27857 - 27927 62.6 # Cys GCA 0 0 + Prom 27859 - 27918 78.3 25 12 Op 1 . + CDS 28102 - 29004 799 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 29018 - 29068 14.1 + Prom 29119 - 29178 7.9 26 12 Op 2 11/0.000 + CDS 29245 - 31638 1849 ## COG1882 Pyruvate-formate lyase 27 12 Op 3 . + CDS 31661 - 32440 559 ## COG1180 Pyruvate-formate lyase-activating enzyme 28 12 Op 4 . + CDS 32510 - 33376 832 ## CLOST_2227 conserved hypothetical protein (prdg) 29 12 Op 5 . + CDS 33404 - 34192 991 ## COG0345 Pyrroline-5-carboxylate reductase + Term 34214 - 34253 -0.2 + Prom 34197 - 34256 6.3 30 13 Tu 1 . + CDS 34416 - 35651 1127 ## COG2966 Uncharacterized conserved protein + Term 35696 - 35728 -0.2 31 14 Tu 1 . - CDS 35654 - 36529 660 ## COG0583 Transcriptional regulator - Prom 36705 - 36764 7.3 + Prom 36557 - 36616 6.3 32 15 Op 1 . + CDS 36747 - 37919 907 ## COG1454 Alcohol dehydrogenase, class IV 33 15 Op 2 . + CDS 37937 - 38500 320 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 34 15 Op 3 . + CDS 38544 - 39110 382 ## COG0716 Flavodoxins 35 15 Op 4 . + CDS 39174 - 39437 212 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 36 15 Op 5 . + CDS 39373 - 39570 56 ## Spirs_1777 aldo/keto reductase + Term 39586 - 39642 14.1 - Term 39572 - 39630 15.4 37 16 Op 1 16/0.000 - CDS 39683 - 40864 1236 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 38 16 Op 2 . - CDS 40880 - 42739 1871 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 39 16 Op 3 . - CDS 42781 - 43398 657 ## COG2188 Transcriptional regulators - Prom 43432 - 43491 4.8 - Term 43508 - 43547 6.4 40 17 Tu 1 . - CDS 43561 - 45066 1302 ## COG0753 Catalase - Prom 45191 - 45250 6.4 + Prom 45069 - 45128 7.5 41 18 Tu 1 . + CDS 45299 - 45787 548 ## COG0315 Molybdenum cofactor biosynthesis enzyme - Term 46031 - 46073 9.1 42 19 Op 1 . - CDS 46078 - 46605 749 ## bpr_I2296 flavodoxin family protein 43 19 Op 2 . - CDS 46632 - 47027 370 ## Cphy_3541 Zn-finger containing protein - Prom 47168 - 47227 3.8 + Prom 47086 - 47145 10.8 44 20 Op 1 . + CDS 47168 - 48451 1540 ## COG3681 Uncharacterized conserved protein 45 20 Op 2 . + CDS 48475 - 49275 986 ## COG4509 Uncharacterized protein conserved in bacteria 46 20 Op 3 1/0.056 + CDS 49278 - 49466 220 ## COG4481 Uncharacterized protein conserved in bacteria 47 21 Op 1 24/0.000 + CDS 49596 - 49883 353 ## PROTEIN SUPPORTED gi|160881892|ref|YP_001560860.1| ribosomal protein S6 48 21 Op 2 21/0.000 + CDS 49905 - 50348 468 ## COG0629 Single-stranded DNA-binding protein 49 21 Op 3 . + CDS 50391 - 50657 350 ## PROTEIN SUPPORTED gi|160940069|ref|ZP_02087414.1| hypothetical protein CLOBOL_04958 + Term 50677 - 50716 9.8 + Prom 50705 - 50764 5.4 50 22 Tu 1 . + CDS 50811 - 51431 814 ## Cphy_3706 hypothetical protein + Term 51451 - 51507 13.4 - Term 51437 - 51495 13.8 51 23 Tu 1 . - CDS 51503 - 53659 2213 ## BCAH187_A2105 hypothetical protein - Prom 53850 - 53909 5.2 + Prom 53752 - 53811 7.9 52 24 Tu 1 . + CDS 53921 - 54544 470 ## Cphy_0670 hypothetical protein + Term 54655 - 54705 -0.5 - Term 54358 - 54392 3.3 53 25 Tu 1 . - CDS 54541 - 55455 777 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 55515 - 55574 8.2 + Prom 55436 - 55495 7.0 54 26 Op 1 35/0.000 + CDS 55663 - 57018 1427 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 57063 - 57109 9.0 + Prom 57042 - 57101 5.5 55 26 Op 2 38/0.000 + CDS 57121 - 58026 1023 ## COG1175 ABC-type sugar transport systems, permease components 56 26 Op 3 . + CDS 58042 - 58926 952 ## COG0395 ABC-type sugar transport system, permease component 57 26 Op 4 . + CDS 58967 - 59893 990 ## EUBREC_0139 hypothetical protein 58 26 Op 5 . + CDS 59893 - 61011 1258 ## EUBREC_0139 hypothetical protein 59 26 Op 6 . + CDS 61023 - 62042 1174 ## COG1087 UDP-glucose 4-epimerase + Term 62058 - 62107 7.4 60 27 Op 1 7/0.000 - CDS 62096 - 63625 1196 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 61 27 Op 2 . - CDS 63600 - 65384 1395 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 65504 - 65563 8.3 + Prom 65477 - 65536 5.3 62 28 Op 1 16/0.000 + CDS 65570 - 66625 1316 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 66638 - 66680 12.6 63 28 Op 2 21/0.000 + CDS 66700 - 68223 187 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 64 28 Op 3 11/0.000 + CDS 68220 - 69209 1076 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 65 28 Op 4 . + CDS 69221 - 70234 1168 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 66 28 Op 5 . + CDS 70237 - 70806 661 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation + Term 70852 - 70898 1.1 67 29 Tu 1 . - CDS 70925 - 71776 792 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 71880 - 71939 8.3 + Prom 71836 - 71895 10.8 68 30 Op 1 9/0.000 + CDS 72020 - 74074 719 ## PROTEIN SUPPORTED gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein 69 30 Op 2 16/0.000 + CDS 74076 - 74525 456 ## PROTEIN SUPPORTED gi|238925603|ref|YP_002939120.1| 50S ribosomal protein L9 70 30 Op 3 . + CDS 74538 - 75878 1593 ## COG0305 Replicative DNA helicase + Term 75898 - 75968 9.1 - Term 75783 - 75827 4.3 71 31 Tu 1 . - CDS 75861 - 76217 357 ## gi|225571333|ref|ZP_03780329.1| hypothetical protein CLOHYLEM_07431 - Prom 76330 - 76389 9.1 + Prom 76330 - 76389 6.4 72 32 Op 1 . + CDS 76428 - 78107 1657 ## gi|225571334|ref|ZP_03780330.1| hypothetical protein CLOHYLEM_07432 73 32 Op 2 . + CDS 78145 - 80451 2197 ## COG1131 ABC-type multidrug transport system, ATPase component 74 32 Op 3 . + CDS 80464 - 80949 571 ## EUBREC_1112 hypothetical protein 75 32 Op 4 . + CDS 80951 - 82957 2244 ## COG0515 Serine/threonine protein kinase 76 32 Op 5 . + CDS 82957 - 83094 257 ## gi|225571338|ref|ZP_03780334.1| hypothetical protein CLOHYLEM_07436 77 32 Op 6 . + CDS 83109 - 84092 1113 ## gi|225571339|ref|ZP_03780335.1| hypothetical protein CLOHYLEM_07437 78 32 Op 7 . + CDS 84115 - 85896 1525 ## Csac_0776 hypothetical protein 79 32 Op 8 . + CDS 85912 - 86172 425 ## gi|225571341|ref|ZP_03780337.1| hypothetical protein CLOHYLEM_07439 80 32 Op 9 . + CDS 86175 - 86948 587 ## gi|225571342|ref|ZP_03780338.1| hypothetical protein CLOHYLEM_07440 81 32 Op 10 . + CDS 87001 - 87615 726 ## COG0515 Serine/threonine protein kinase 82 32 Op 11 . + CDS 87632 - 88465 888 ## COG0860 N-acetylmuramoyl-L-alanine amidase 83 32 Op 12 . + CDS 88483 - 89391 906 ## COG2367 Beta-lactamase class A - Term 89168 - 89203 8.1 84 33 Op 1 . - CDS 89418 - 90365 911 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 85 33 Op 2 . - CDS 90378 - 91385 874 ## COG3734 2-keto-3-deoxy-galactonokinase 86 33 Op 3 . - CDS 91457 - 92320 965 ## COG1737 Transcriptional regulators - Prom 92445 - 92504 11.8 + Prom 92393 - 92452 10.6 87 34 Op 1 16/0.000 + CDS 92571 - 93719 1561 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 93726 - 93776 3.4 88 34 Op 2 21/0.000 + CDS 93791 - 95284 172 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 89 34 Op 3 . + CDS 95307 - 96272 1272 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 90 34 Op 4 . + CDS 96291 - 96974 719 ## COG1878 Predicted metal-dependent hydrolase 91 34 Op 5 . + CDS 96993 - 97880 1145 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 92 34 Op 6 . + CDS 97880 - 98914 1156 ## COG3734 2-keto-3-deoxy-galactonokinase 93 34 Op 7 . + CDS 98902 - 99873 1244 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 94 34 Op 8 1/0.056 + CDS 99894 - 100553 706 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 95 34 Op 9 . + CDS 100540 - 101688 1169 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 96 35 Tu 1 . - CDS 101792 - 101962 189 ## gi|153854059|ref|ZP_01995392.1| hypothetical protein DORLON_01383 - Prom 102032 - 102091 9.0 97 36 Op 1 11/0.000 - CDS 102095 - 102847 487 ## COG1180 Pyruvate-formate lyase-activating enzyme 98 36 Op 2 . - CDS 102947 - 103189 347 ## COG1882 Pyruvate-formate lyase 99 36 Op 3 . - CDS 103210 - 105324 2304 ## COG1882 Pyruvate-formate lyase - Prom 105444 - 105503 6.3 + Prom 105427 - 105486 9.2 100 37 Op 1 . + CDS 105551 - 106756 1308 ## COG1879 ABC-type sugar transport system, periplasmic component 101 37 Op 2 . + CDS 106832 - 108256 1106 ## Clocel_1077 hypothetical protein + Term 108261 - 108318 14.2 - Term 108247 - 108305 15.2 102 38 Op 1 40/0.000 - CDS 108319 - 109734 1497 ## COG0642 Signal transduction histidine kinase 103 38 Op 2 . - CDS 109746 - 110450 928 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 104 38 Op 3 . - CDS 110469 - 112844 2170 ## COG1193 Mismatch repair ATPase (MutS family) - Prom 112931 - 112990 2.8 + Prom 112876 - 112935 10.2 105 39 Op 1 . + CDS 112957 - 114237 1494 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 106 39 Op 2 . + CDS 114254 - 115195 901 ## COG3481 Predicted HD-superfamily hydrolase + Term 115216 - 115273 5.6 107 40 Tu 1 . + CDS 115298 - 116713 1344 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 108 41 Tu 1 . + CDS 117270 - 117374 58 ## + Prom 117811 - 117870 3.8 109 42 Tu 1 . + CDS 117938 - 119326 247 ## COG4694 Uncharacterized protein conserved in bacteria + Prom 119861 - 119920 7.6 110 43 Tu 1 . + CDS 120003 - 120098 58 ## + Term 120104 - 120136 0.4 + Prom 121281 - 121340 5.7 111 44 Op 1 . + CDS 121563 - 121643 91 ## 112 44 Op 2 . + CDS 121706 - 121786 62 ## + Prom 122244 - 122303 6.8 113 45 Tu 1 . + CDS 122387 - 124414 153 ## CD3148 hypothetical protein + Prom 125206 - 125265 7.0 114 46 Tu 1 . + CDS 125408 - 125500 78 ## + Term 125561 - 125597 -0.4 + Prom 127508 - 127567 4.1 115 47 Tu 1 . + CDS 127693 - 128091 97 ## gi|225571374|ref|ZP_03780370.1| hypothetical protein CLOHYLEM_07472 + Prom 128670 - 128729 5.9 116 48 Tu 1 . + CDS 128933 - 129967 29 ## CD3150 hypothetical protein + Term 130065 - 130115 3.7 117 49 Tu 1 . - CDS 130237 - 131364 735 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 131385 - 131444 6.7 + Prom 131470 - 131529 5.3 118 50 Op 1 . + CDS 131570 - 132862 1004 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 119 50 Op 2 . + CDS 132859 - 133692 651 ## COG3947 Response regulator containing CheY-like receiver and SARP domains 120 50 Op 3 . + CDS 133692 - 135350 1295 ## COG0840 Methyl-accepting chemotaxis protein + Term 135365 - 135399 0.4 + Prom 135555 - 135614 6.4 121 51 Tu 1 . + CDS 135705 - 136811 668 ## COG4335 DNA alkylation repair enzyme - Term 136658 - 136697 -0.2 122 52 Tu 1 . - CDS 136830 - 138932 1811 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 139058 - 139117 6.3 + Prom 139037 - 139096 8.0 123 53 Op 1 . + CDS 139268 - 139705 518 ## Elen_0700 hypothetical protein 124 53 Op 2 . + CDS 139746 - 140051 160 ## ELI_0344 hypothetical protein 125 53 Op 3 . + CDS 140150 - 142087 1775 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Term 142098 - 142148 20.6 126 54 Tu 1 . - CDS 142186 - 145761 2531 ## COG4932 Predicted outer membrane protein - Prom 145782 - 145841 3.5 + Prom 145755 - 145814 5.9 127 55 Op 1 5/0.000 + CDS 145910 - 148747 3140 ## COG0642 Signal transduction histidine kinase 128 55 Op 2 3/0.028 + CDS 148780 - 149772 1033 ## COG2199 FOG: GGDEF domain 129 55 Op 3 . + CDS 149774 - 150508 544 ## PROTEIN SUPPORTED gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase + Term 150534 - 150573 9.8 130 56 Tu 1 . - CDS 150526 - 152268 938 ## CbC4_0855 membrane protein - Prom 152313 - 152372 7.9 + Prom 152269 - 152328 14.4 131 57 Tu 1 . + CDS 152424 - 152870 518 ## CKR_1355 hypothetical protein 132 58 Tu 1 . - CDS 152867 - 154654 1794 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 154719 - 154778 5.3 + Prom 154672 - 154731 11.2 133 59 Op 1 . + CDS 154826 - 155377 489 ## COG1309 Transcriptional regulator 134 59 Op 2 . + CDS 155454 - 155804 493 ## ELI_3756 hypothetical protein + Term 155831 - 155872 3.0 - Term 155819 - 155859 2.0 135 60 Tu 1 . - CDS 155924 - 156742 897 ## COG0561 Predicted hydrolases of the HAD superfamily - Term 156754 - 156801 15.6 136 61 Op 1 6/0.000 - CDS 156802 - 158175 1659 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 137 61 Op 2 . - CDS 158181 - 159245 1198 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 138 61 Op 3 . - CDS 159264 - 160718 1447 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 160779 - 160838 6.7 139 62 Op 1 . - CDS 160840 - 161574 877 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 140 62 Op 2 . - CDS 161609 - 163120 1399 ## COG1640 4-alpha-glucanotransferase - Prom 163169 - 163228 6.5 + Prom 163169 - 163228 6.0 141 63 Op 1 . + CDS 163252 - 163659 378 ## Cphy_3813 hypothetical protein 142 63 Op 2 1/0.056 + CDS 163672 - 165231 1957 ## COG1388 FOG: LysM repeat 143 63 Op 3 . + CDS 165294 - 166169 1014 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 144 63 Op 4 . + CDS 166172 - 166849 1031 ## COG1802 Transcriptional regulators 145 63 Op 5 . + CDS 166938 - 167618 1017 ## EUBREC_1003 stage II sporulation protein R 146 63 Op 6 . + CDS 167637 - 168833 1354 ## COG0053 Predicted Co/Zn/Cd cation transporters 147 63 Op 7 . + CDS 168837 - 169550 883 ## COG3884 Acyl-ACP thioesterase 148 63 Op 8 . + CDS 169547 - 170380 324 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains + Prom 170423 - 170482 5.9 149 64 Tu 1 . + CDS 170523 - 170756 380 ## Closa_1693 hypothetical protein + Term 170814 - 170865 6.3 + Prom 170824 - 170883 5.0 150 65 Tu 1 . + CDS 171071 - 176671 4491 ## Shel_11500 conserved repeat protein + Term 176746 - 176796 3.2 + Prom 176747 - 176806 6.0 151 66 Op 1 3/0.028 + CDS 176918 - 180316 3879 ## COG0587 DNA polymerase III, alpha subunit 152 66 Op 2 . + CDS 180383 - 181360 1183 ## COG0205 6-phosphofructokinase 153 67 Op 1 . + CDS 181483 - 182304 1061 ## COG0796 Glutamate racemase 154 67 Op 2 . + CDS 182313 - 182756 640 ## COG4506 Uncharacterized protein conserved in bacteria + Term 182830 - 182863 -0.3 - Term 182723 - 182773 11.4 155 68 Tu 1 . - CDS 182784 - 183224 539 ## Cphy_3788 hypothetical protein - Prom 183326 - 183385 5.9 + Prom 183110 - 183169 5.7 156 69 Tu 1 . + CDS 183390 - 184865 1751 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Prom 184880 - 184939 6.7 157 70 Tu 1 . + CDS 184993 - 186069 1468 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 186080 - 186122 7.1 - Term 186067 - 186109 7.1 158 71 Op 1 6/0.000 - CDS 186122 - 187516 1069 ## COG2199 FOG: GGDEF domain - Prom 187637 - 187696 3.6 159 71 Op 2 . - CDS 187737 - 189416 1603 ## COG2200 FOG: EAL domain - Prom 189469 - 189528 11.2 160 72 Op 1 . - CDS 189534 - 191465 1552 ## COG1193 Mismatch repair ATPase (MutS family) 161 72 Op 2 . - CDS 191471 - 191557 59 ## + Prom 191984 - 192043 8.2 162 73 Op 1 16/0.000 + CDS 192076 - 193065 1259 ## COG1879 ABC-type sugar transport system, periplasmic component 163 73 Op 2 21/0.000 + CDS 193141 - 194652 182 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 164 73 Op 3 . + CDS 194649 - 195656 1261 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 165 73 Op 4 . + CDS 195699 - 196661 882 ## COG0657 Esterase/lipase + Prom 196673 - 196732 2.8 166 74 Op 1 16/0.000 + CDS 196806 - 197654 898 ## COG1879 ABC-type sugar transport system, periplasmic component 167 74 Op 2 . + CDS 197713 - 198663 1209 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 168 75 Op 1 . - CDS 198668 - 200170 1227 ## COG1129 ABC-type sugar transport system, ATPase component 169 75 Op 2 7/0.000 - CDS 200180 - 201079 564 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 170 75 Op 3 . - CDS 201095 - 202690 1200 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 202915 - 202974 6.8 + Prom 202750 - 202809 6.4 171 76 Op 1 . + CDS 202955 - 203245 293 ## Cphy_0210 sporulation transcriptional regulator SpoIIID 172 76 Op 2 1/0.056 + CDS 203296 - 204537 1336 ## COG1653 ABC-type sugar transport system, periplasmic component 173 76 Op 3 7/0.000 + CDS 204534 - 206255 1704 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 174 76 Op 4 . + CDS 206252 - 207772 1805 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain + Prom 207815 - 207874 7.6 175 77 Tu 1 . + CDS 207966 - 208196 233 ## Calhy_1445 phosphotransferase system, phosphocarrier protein HPr + Term 208240 - 208277 3.3 + Prom 208216 - 208275 5.1 176 78 Op 1 . + CDS 208324 - 209685 1632 ## COG0534 Na+-driven multidrug efflux pump + Prom 209687 - 209746 5.6 177 78 Op 2 . + CDS 209772 - 211319 1747 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Prom 212455 - 212514 2.6 178 79 Op 1 . + CDS 212543 - 213373 280 ## PA14_49030 hypothetical protein 179 79 Op 2 . + CDS 213373 - 213978 243 ## gi|225571446|ref|ZP_03780442.1| hypothetical protein CLOHYLEM_07544 180 79 Op 3 . + CDS 213996 - 214082 60 ## 181 79 Op 4 . + CDS 214164 - 214241 68 ## 182 79 Op 5 . + CDS 214285 - 215235 390 ## Ssed_0897 hypothetical protein + Prom 215297 - 215356 3.3 183 80 Tu 1 . + CDS 215396 - 215479 57 ## 184 81 Tu 1 . + CDS 216024 - 216116 100 ## + Prom 216873 - 216932 6.8 185 82 Tu 1 . + CDS 217005 - 217736 378 ## CAR_c11050 hypothetical protein + Prom 218031 - 218090 5.7 186 83 Tu 1 . + CDS 218129 - 218740 280 ## Cbei_2807 hypothetical protein + Term 218928 - 218977 4.1 + Prom 219957 - 220016 6.8 187 84 Op 1 . + CDS 220052 - 221185 597 ## COG0270 Site-specific DNA methylase 188 84 Op 2 . + CDS 221265 - 222017 181 ## lpp1079 hypothetical protein 189 84 Op 3 . + CDS 222022 - 222438 153 ## COG3727 DNA G:T-mismatch repair endonuclease 190 84 Op 4 . + CDS 222440 - 222544 83 ## + Term 222666 - 222702 7.3 - Term 222532 - 222576 -0.9 191 85 Tu 1 . - CDS 222595 - 222678 65 ## - Prom 222744 - 222803 5.8 + Prom 223065 - 223124 5.8 192 86 Tu 1 . + CDS 223183 - 224358 438 ## BAA_3824 hypothetical protein + Term 224378 - 224423 5.5 - Term 224357 - 224418 11.0 193 87 Op 1 . - CDS 224446 - 225639 1106 ## BCE_1989 hypothetical protein 194 87 Op 2 2/0.028 - CDS 225626 - 226540 996 ## COG1131 ABC-type multidrug transport system, ATPase component 195 87 Op 3 . - CDS 226540 - 227451 700 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 227495 - 227554 5.8 + Prom 227446 - 227505 6.8 196 88 Op 1 . + CDS 227605 - 228198 546 ## Cbei_2877 TetR family transcriptional regulator 197 88 Op 2 . + CDS 228255 - 230225 1174 ## COG1331 Highly conserved protein containing a thioredoxin domain + Term 230230 - 230278 13.9 + Prom 230305 - 230364 8.1 198 89 Op 1 11/0.000 + CDS 230600 - 231712 1243 ## COG4213 ABC-type xylose transport system, periplasmic component + Term 231738 - 231770 4.7 + Prom 231717 - 231776 1.7 199 89 Op 2 11/0.000 + CDS 231803 - 233320 1889 ## COG1129 ABC-type sugar transport system, ATPase component 200 89 Op 3 . + CDS 233338 - 234489 1393 ## COG4214 ABC-type xylose transport system, permease component 201 89 Op 4 . + CDS 234504 - 235397 1125 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 202 89 Op 5 . + CDS 235416 - 236447 882 ## COG0524 Sugar kinases, ribokinase family 203 89 Op 6 . + CDS 236485 - 237540 340 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase 204 90 Tu 1 . + CDS 237611 - 238765 897 ## COG1940 Transcriptional regulator/sugar kinase + Term 238931 - 238970 -0.6 205 91 Tu 1 . - CDS 238762 - 239418 459 ## Closa_2883 hypothetical protein - Prom 239454 - 239513 6.8 + Prom 239423 - 239482 7.3 206 92 Tu 1 . + CDS 239561 - 240085 540 ## EUBREC_2745 hypothetical protein + Term 240108 - 240144 5.7 + Prom 240123 - 240182 5.5 207 93 Tu 1 . + CDS 240260 - 241102 819 ## Blon_1002 hypothetical protein + Prom 241151 - 241210 3.1 208 94 Tu 1 . + CDS 241271 - 241687 449 ## Closa_3192 hypothetical protein + Term 241746 - 241779 2.4 + Prom 241694 - 241753 5.3 209 95 Op 1 . + CDS 241812 - 242180 382 ## COG3070 Regulator of competence-specific genes 210 95 Op 2 . + CDS 242146 - 242808 576 ## COG4832 Uncharacterized conserved protein + Term 242863 - 242902 1.2 + Prom 242831 - 242890 3.7 211 96 Tu 1 . + CDS 242960 - 244798 2201 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Prom 244833 - 244892 5.5 212 97 Op 1 . + CDS 244920 - 246005 1027 ## COG1396 Predicted transcriptional regulators 213 97 Op 2 . + CDS 245995 - 246654 632 ## Closa_1597 hypothetical protein + Term 246666 - 246727 15.1 + Prom 246750 - 246809 4.6 214 98 Op 1 . + CDS 246871 - 250071 2825 ## COG0210 Superfamily I DNA and RNA helicases 215 98 Op 2 . + CDS 250150 - 250998 860 ## COG0789 Predicted transcriptional regulators + Term 251019 - 251055 2.5 + Prom 251048 - 251107 4.6 216 99 Op 1 . + CDS 251138 - 251392 373 ## COG3070 Regulator of competence-specific genes 217 99 Op 2 . + CDS 251379 - 252281 224 ## PROTEIN SUPPORTED gi|90020671|ref|YP_526498.1| ribosomal protein S6 218 99 Op 3 . + CDS 252285 - 253058 797 ## COG3022 Uncharacterized protein conserved in bacteria 219 99 Op 4 . + CDS 253106 - 253918 741 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase + Prom 254095 - 254154 80.3 220 100 Op 1 . + CDS 254276 - 254557 123 ## gi|225571488|ref|ZP_03780484.1| hypothetical protein CLOHYLEM_07586 221 100 Op 2 . + CDS 254497 - 255786 1163 ## gi|225571489|ref|ZP_03780485.1| hypothetical protein CLOHYLEM_07587 222 100 Op 3 . + CDS 255787 - 257880 1560 ## Cphy_3336 alpha-tubulin suppressor and related RCC1 domain-containing protein + Prom 257922 - 257981 3.8 223 101 Tu 1 . + CDS 258016 - 258480 560 ## COG3708 Uncharacterized protein conserved in bacteria + Term 258660 - 258688 -0.9 - Term 258254 - 258301 5.4 224 102 Op 1 . - CDS 258453 - 258848 541 ## bpr_III171 hypothetical protein 225 102 Op 2 . - CDS 258866 - 259312 483 ## Cbei_3478 hypothetical protein 226 102 Op 3 . - CDS 259293 - 259514 228 ## COG1476 Predicted transcriptional regulators - Prom 259545 - 259604 7.4 + Prom 259592 - 259651 8.3 227 103 Op 1 . + CDS 259679 - 260197 528 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 228 103 Op 2 . + CDS 260194 - 260829 209 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 229 103 Op 3 . + CDS 260864 - 261511 511 ## COG2755 Lysophospholipase L1 and related esterases - Term 261313 - 261348 4.1 230 104 Tu 1 . - CDS 261458 - 262804 1244 ## COG0534 Na+-driven multidrug efflux pump - Prom 262856 - 262915 4.2 + Prom 262736 - 262795 3.0 231 105 Op 1 . + CDS 262928 - 264094 803 ## Closa_2166 FliB family protein 232 105 Op 2 36/0.000 + CDS 264122 - 264895 1048 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 233 105 Op 3 5/0.000 + CDS 264885 - 266957 1933 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 234 105 Op 4 40/0.000 + CDS 266972 - 267658 633 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 235 105 Op 5 . + CDS 267678 - 268667 799 ## COG0642 Signal transduction histidine kinase 236 105 Op 6 . + CDS 268747 - 269208 550 ## Closa_1284 spore coat protein CotJB 237 105 Op 7 . + CDS 269208 - 269825 683 ## COG3546 Mn-containing catalase + Term 269845 - 269901 16.0 + Prom 270041 - 270100 8.9 238 106 Tu 1 . + CDS 270130 - 270474 298 ## gi|225571505|ref|ZP_03780501.1| hypothetical protein CLOHYLEM_07603 + Term 270512 - 270570 13.8 - Term 270671 - 270723 -0.0 239 107 Tu 1 . - CDS 270742 - 271323 608 ## COG1971 Predicted membrane protein - Prom 271356 - 271415 4.2 + Prom 271301 - 271360 5.8 240 108 Op 1 . + CDS 271438 - 272484 1286 ## COG0739 Membrane proteins related to metalloendopeptidases 241 108 Op 2 . + CDS 272563 - 274677 2396 ## COG2200 FOG: EAL domain + Prom 274713 - 274772 6.2 242 109 Tu 1 . + CDS 274854 - 277334 2782 ## COG0474 Cation transport ATPase 243 110 Tu 1 . - CDS 277340 - 277870 499 ## COG0622 Predicted phosphoesterase - Prom 277903 - 277962 3.9 + Prom 277862 - 277921 8.8 244 111 Tu 1 . + CDS 277969 - 278481 536 ## Closa_3061 GCN5-related N-acetyltransferase + Term 278494 - 278531 4.5 245 112 Tu 1 . - CDS 278501 - 279313 850 ## COG2365 Protein tyrosine/serine phosphatase - Prom 279340 - 279399 9.9 + Prom 279443 - 279502 8.3 246 113 Op 1 . + CDS 279568 - 279729 267 ## gi|225571514|ref|ZP_03780510.1| hypothetical protein CLOHYLEM_07612 247 113 Op 2 . + CDS 279733 - 280401 687 ## COG0637 Predicted phosphatase/phosphohexomutase - Term 280373 - 280415 11.1 248 114 Tu 1 . - CDS 280445 - 281302 703 ## COG1092 Predicted SAM-dependent methyltransferases - Prom 281439 - 281498 6.8 + Prom 281378 - 281437 4.4 249 115 Tu 1 . + CDS 281467 - 282198 778 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 250 116 Op 1 . + CDS 282299 - 282880 770 ## EUBREC_3158 hypothetical protein + Prom 282908 - 282967 2.2 251 116 Op 2 1/0.056 + CDS 283023 - 283982 1100 ## COG0709 Selenophosphate synthase + Term 283985 - 284032 17.3 252 117 Op 1 7/0.000 + CDS 284068 - 285495 1583 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 253 117 Op 2 . + CDS 285510 - 287423 1992 ## COG3276 Selenocysteine-specific translation elongation factor 254 117 Op 3 . + CDS 287423 - 288331 934 ## COG0583 Transcriptional regulator + Term 288341 - 288383 5.1 + Prom 288366 - 288425 9.1 255 118 Op 1 . + CDS 288468 - 289604 1126 ## COG0520 Selenocysteine lyase 256 118 Op 2 . + CDS 289659 - 290756 273 ## PROTEIN SUPPORTED gi|167854911|ref|ZP_02477687.1| ribosomal protein L11 methyltransferase 257 118 Op 3 . + CDS 290819 - 291022 369 ## gi|225571527|ref|ZP_03780523.1| hypothetical protein CLOHYLEM_07625 258 118 Op 4 . + CDS 291025 - 291261 160 ## Shel_25430 hypothetical protein + Term 291282 - 291343 22.2 - Term 291275 - 291325 22.2 259 119 Op 1 . - CDS 291351 - 291938 627 ## COG1309 Transcriptional regulator - Prom 291960 - 292019 7.3 - Term 291979 - 292017 7.1 260 119 Op 2 . - CDS 292057 - 293091 1028 ## COG3938 Proline racemase - Prom 293265 - 293324 7.6 + Prom 293569 - 293628 5.0 261 120 Tu 1 . + CDS 293654 - 294982 1194 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC + Term 295067 - 295096 -0.7 + Prom 295048 - 295107 4.9 262 121 Op 1 . + CDS 295154 - 297010 1159 ## CLOST_2234 D-proline reductase proprotein prda [contains: D-proline reductase subunit beta (d-proline reductase 45 kda subunit); D-proline reductase subunit alpha (d-proline reductase 23 kda subunit)] (EC:1.21.4.1) 263 121 Op 2 . + CDS 297026 - 297322 319 ## CLOST_2233 hypothetical protein + Prom 297325 - 297384 1.9 264 121 Op 3 . + CDS 297421 - 297777 355 ## Toce_1681 D-proline reductase (dithiol) (EC:1.21.4.1) + Prom 298091 - 298150 4.3 265 122 Op 1 . + CDS 298190 - 298957 699 ## Clos_0031 D-proline reductase (dithiol) (EC:1.21.4.1) 266 122 Op 2 . + CDS 298969 - 299442 652 ## CDR20291_3099 hypothetical protein + Term 299487 - 299534 13.3 - Term 299551 - 299583 -0.8 267 123 Tu 1 . - CDS 299586 - 299741 272 ## - Prom 299769 - 299828 4.8 - Term 299824 - 299870 14.5 268 124 Tu 1 . - CDS 299966 - 300040 59 ## - Prom 300185 - 300244 13.1 + Prom 300067 - 300126 5.4 269 125 Tu 1 . + CDS 300365 - 300994 537 ## gi|225571539|ref|ZP_03780535.1| hypothetical protein CLOHYLEM_07637 + Term 301010 - 301051 10.6 - Term 300998 - 301039 10.6 270 126 Tu 1 . - CDS 301057 - 301923 863 ## Toce_1675 integral membrane protein - Prom 302088 - 302147 10.2 + Prom 302258 - 302317 6.1 271 127 Op 1 . + CDS 302387 - 304537 1812 ## gi|225571541|ref|ZP_03780537.1| hypothetical protein CLOHYLEM_07639 272 127 Op 2 . + CDS 304585 - 304881 388 ## gi|225571542|ref|ZP_03780538.1| hypothetical protein CLOHYLEM_07640 273 127 Op 3 . + CDS 304931 - 305386 173 ## gi|225571543|ref|ZP_03780539.1| hypothetical protein CLOHYLEM_07641 274 127 Op 4 . + CDS 305352 - 305588 170 ## gi|225571544|ref|ZP_03780540.1| hypothetical protein CLOHYLEM_07642 275 127 Op 5 . + CDS 305635 - 306951 836 ## gi|225571545|ref|ZP_03780541.1| hypothetical protein CLOHYLEM_07643 276 127 Op 6 . + CDS 306964 - 307650 285 ## gi|225571546|ref|ZP_03780542.1| hypothetical protein CLOHYLEM_07644 277 127 Op 7 4/0.028 + CDS 307750 - 308901 946 ## COG4499 Predicted membrane protein 278 127 Op 8 . + CDS 308906 - 313189 3169 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 279 127 Op 9 . + CDS 313210 - 313473 239 ## gi|225571549|ref|ZP_03780545.1| hypothetical protein CLOHYLEM_07647 280 127 Op 10 . + CDS 313507 - 313875 262 ## gi|225571550|ref|ZP_03780546.1| hypothetical protein CLOHYLEM_07648 + Prom 313904 - 313963 9.0 281 128 Op 1 40/0.000 + CDS 314189 - 314506 512 ## PROTEIN SUPPORTED gi|240145879|ref|ZP_04744480.1| 30S ribosomal protein S10 282 128 Op 2 58/0.000 + CDS 314581 - 315261 941 ## PROTEIN SUPPORTED gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 283 128 Op 3 61/0.000 + CDS 315291 - 315911 830 ## PROTEIN SUPPORTED gi|238922831|ref|YP_002936344.1| ribosomal protein L4/L1e 284 128 Op 4 61/0.000 + CDS 315911 - 316216 380 ## PROTEIN SUPPORTED gi|240145876|ref|ZP_04744477.1| 50S ribosomal protein L23 + Prom 316220 - 316279 1.7 285 128 Op 5 60/0.000 + CDS 316299 - 317141 1282 ## PROTEIN SUPPORTED gi|240145875|ref|ZP_04744476.1| 50S ribosomal protein L2 286 128 Op 6 59/0.000 + CDS 317163 - 317444 464 ## PROTEIN SUPPORTED gi|240145874|ref|ZP_04744475.1| 30S ribosomal protein S19 287 128 Op 7 61/0.000 + CDS 317475 - 317861 596 ## PROTEIN SUPPORTED gi|240145873|ref|ZP_04744474.1| 50S ribosomal protein L22 288 128 Op 8 50/0.000 + CDS 317873 - 318529 984 ## PROTEIN SUPPORTED gi|240145872|ref|ZP_04744473.1| SSU ribosomal protein S3P 289 128 Op 9 . + CDS 318529 - 318966 678 ## PROTEIN SUPPORTED gi|160881778|ref|YP_001560746.1| 50S ribosomal protein L16 290 128 Op 10 . + CDS 318947 - 319165 300 ## PROTEIN SUPPORTED gi|239623355|ref|ZP_04666386.1| 30S ribosomal protein S17 291 128 Op 11 50/0.000 + CDS 319186 - 319440 377 ## PROTEIN SUPPORTED gi|160881776|ref|YP_001560744.1| ribosomal protein S17 292 128 Op 12 57/0.000 + CDS 319460 - 319828 557 ## PROTEIN SUPPORTED gi|160881775|ref|YP_001560743.1| ribosomal protein L14 293 128 Op 13 48/0.000 + CDS 319844 - 320155 420 ## PROTEIN SUPPORTED gi|240145867|ref|ZP_04744468.1| 50S ribosomal protein L24 294 128 Op 14 50/0.000 + CDS 320173 - 320718 814 ## PROTEIN SUPPORTED gi|240145866|ref|ZP_04744467.1| 50S ribosomal protein L5 295 128 Op 15 50/0.000 + CDS 320730 - 320915 302 ## PROTEIN SUPPORTED gi|158319556|ref|YP_001512063.1| ribosomal protein S14 296 128 Op 16 55/0.000 + CDS 320936 - 321337 591 ## PROTEIN SUPPORTED gi|240145864|ref|ZP_04744465.1| ribosomal protein S8 + Term 321368 - 321407 1.9 297 128 Op 17 46/0.000 + CDS 321420 - 321962 804 ## PROTEIN SUPPORTED gi|160881770|ref|YP_001560738.1| ribosomal protein L6 298 128 Op 18 56/0.000 + CDS 321980 - 322348 494 ## PROTEIN SUPPORTED gi|239623363|ref|ZP_04666394.1| ribosomal protein L18 299 128 Op 19 50/0.000 + CDS 322363 - 322872 701 ## PROTEIN SUPPORTED gi|240145861|ref|ZP_04744462.1| ribosomal protein S5 300 128 Op 20 48/0.000 + CDS 322887 - 323066 213 ## PROTEIN SUPPORTED gi|168334334|ref|ZP_02692521.1| 50S ribosomal protein L30 -related protein 301 128 Op 21 53/0.000 + CDS 323094 - 323534 633 ## PROTEIN SUPPORTED gi|238922848|ref|YP_002936361.1| 50S ribosomal protein L15 302 128 Op 22 28/0.000 + CDS 323534 - 324850 848 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 303 128 Op 23 12/0.000 + CDS 324916 - 325560 706 ## COG0563 Adenylate kinase and related kinases 304 128 Op 24 . + CDS 325566 - 326321 663 ## COG0024 Methionine aminopeptidase 305 128 Op 25 . + CDS 326345 - 326608 311 ## gi|225571576|ref|ZP_03780572.1| hypothetical protein CLOHYLEM_07674 306 128 Op 26 . + CDS 326610 - 326828 268 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Prom 326831 - 326890 5.3 307 129 Tu 1 . + CDS 326935 - 327066 190 ## PROTEIN SUPPORTED gi|146297261|ref|YP_001181032.1| ribosomal protein L36 308 130 Op 1 48/0.000 + CDS 327580 - 327948 552 ## PROTEIN SUPPORTED gi|240145852|ref|ZP_04744453.1| ribosomal protein S13p/S18e 309 130 Op 2 36/0.000 + CDS 327994 - 328389 641 ## PROTEIN SUPPORTED gi|239623373|ref|ZP_04666404.1| ribosomal protein S11 310 130 Op 3 26/0.000 + CDS 328480 - 329073 834 ## PROTEIN SUPPORTED gi|240145850|ref|ZP_04744451.1| 30S ribosomal protein S4 311 130 Op 4 50/0.000 + CDS 329104 - 330063 801 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 312 130 Op 5 . + CDS 330174 - 330710 786 ## PROTEIN SUPPORTED gi|240145848|ref|ZP_04744449.1| LSU ribosomal protein L17P + Term 330727 - 330798 28.5 - Term 330722 - 330779 24.6 313 131 Tu 1 . - CDS 330787 - 330999 75 ## gi|225571584|ref|ZP_03780580.1| hypothetical protein CLOHYLEM_07682 - Prom 331048 - 331107 6.7 + Prom 331028 - 331087 9.4 314 132 Op 1 . + CDS 331267 - 331737 305 ## gi|225571585|ref|ZP_03780581.1| hypothetical protein CLOHYLEM_07683 315 132 Op 2 . + CDS 331773 - 332243 140 ## gi|225571586|ref|ZP_03780582.1| hypothetical protein CLOHYLEM_07684 316 132 Op 3 . + CDS 332197 - 333288 478 ## gi|225571587|ref|ZP_03780583.1| hypothetical protein CLOHYLEM_07685 317 132 Op 4 . + CDS 333330 - 333470 65 ## gi|225571588|ref|ZP_03780584.1| hypothetical protein CLOHYLEM_07686 318 132 Op 5 . + CDS 333467 - 333886 226 ## gi|225571589|ref|ZP_03780585.1| hypothetical protein CLOHYLEM_07687 319 132 Op 6 . + CDS 333911 - 334627 556 ## COG1309 Transcriptional regulator 320 133 Tu 1 . + CDS 334701 - 335738 1231 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog + Term 335775 - 335815 -0.9 + Prom 335832 - 335891 7.9 321 134 Op 1 6/0.000 + CDS 335995 - 337797 1844 ## COG1012 NAD-dependent aldehyde dehydrogenases 322 134 Op 2 . + CDS 337908 - 338609 957 ## COG1454 Alcohol dehydrogenase, class IV + Term 338656 - 338707 16.5 + Prom 338628 - 338687 5.8 323 135 Op 1 . + CDS 338761 - 338844 62 ## 324 135 Op 2 . + CDS 338881 - 339636 820 ## Cthe_0424 aminoglycoside phosphotransferase + Term 339668 - 339712 4.4 - Term 339656 - 339700 4.4 325 136 Tu 1 . - CDS 339734 - 340837 722 ## COG3883 Uncharacterized protein conserved in bacteria - Prom 340867 - 340926 8.5 + Prom 340863 - 340922 9.5 326 137 Op 1 . + CDS 340952 - 341539 709 ## gi|225571597|ref|ZP_03780593.1| hypothetical protein CLOHYLEM_07695 327 137 Op 2 . + CDS 341523 - 342350 947 ## COG0561 Predicted hydrolases of the HAD superfamily 328 138 Tu 1 . + CDS 342437 - 343264 1054 ## COG1968 Uncharacterized bacitracin resistance protein + Term 343399 - 343445 -0.5 + Prom 343690 - 343749 4.9 329 139 Op 1 31/0.000 + CDS 343805 - 344584 1097 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 330 139 Op 2 34/0.000 + CDS 344603 - 345295 862 ## COG0765 ABC-type amino acid transport system, permease component 331 139 Op 3 . + CDS 345285 - 346028 593 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 346091 - 346140 16.1 - Term 346078 - 346126 12.1 332 140 Tu 1 . - CDS 346147 - 347283 1065 ## gi|225571605|ref|ZP_03780601.1| hypothetical protein CLOHYLEM_07703 - Prom 347454 - 347513 9.2 333 141 Op 1 . + CDS 347622 - 348575 951 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 334 141 Op 2 21/0.000 + CDS 348603 - 350135 1287 ## COG1129 ABC-type sugar transport system, ATPase component 335 141 Op 3 11/0.000 + CDS 350128 - 351126 1311 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 336 141 Op 4 . + CDS 351145 - 352131 1060 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 337 141 Op 5 3/0.028 + CDS 352154 - 353206 1182 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 338 141 Op 6 1/0.056 + CDS 353237 - 354727 1302 ## COG1070 Sugar (pentulose and hexulose) kinases 339 141 Op 7 3/0.028 + CDS 354757 - 355656 977 ## COG0191 Fructose/tagatose bisphosphate aldolase 340 141 Op 8 . + CDS 355676 - 356740 772 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Prom 356778 - 356837 3.7 341 142 Tu 1 . + CDS 356858 - 357799 993 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 357836 - 357877 2.5 - Term 357828 - 357861 -0.3 342 143 Tu 1 . - CDS 357897 - 359453 1510 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 359491 - 359550 4.0 + Prom 359561 - 359620 6.5 343 144 Op 1 16/0.000 + CDS 359674 - 361755 1465 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 344 144 Op 2 . + CDS 361745 - 362206 249 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 345 144 Op 3 4/0.028 + CDS 362184 - 362768 549 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 346 144 Op 4 4/0.028 + CDS 362770 - 363969 924 ## COG0303 Molybdopterin biosynthesis enzyme 347 144 Op 5 . + CDS 363951 - 364427 392 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein 348 144 Op 6 . + CDS 364396 - 365163 600 ## Pjdr2_5268 hypothetical protein + Prom 365167 - 365226 4.7 349 145 Op 1 35/0.000 + CDS 365249 - 366559 1311 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 366569 - 366611 7.6 350 145 Op 2 38/0.000 + CDS 366635 - 367513 1020 ## COG1175 ABC-type sugar transport systems, permease components 351 145 Op 3 . + CDS 367513 - 368328 1045 ## COG0395 ABC-type sugar transport system, permease component 352 146 Tu 1 . - CDS 368311 - 369984 1299 ## Closa_4081 hypothetical protein - Prom 370035 - 370094 7.9 + Prom 370132 - 370191 3.7 353 147 Tu 1 . + CDS 370242 - 372005 515 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 + Term 372016 - 372050 5.2 - Term 371994 - 372048 10.2 354 148 Op 1 . - CDS 372071 - 372493 599 ## EUBREC_1216 hemerythrin 355 148 Op 2 . - CDS 372531 - 373199 696 ## Cphy_3720 phosphatase - Prom 373226 - 373285 5.5 356 149 Op 1 . - CDS 373301 - 374119 499 ## COG0584 Glycerophosphoryl diester phosphodiesterase 357 149 Op 2 . - CDS 374144 - 375061 774 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 358 149 Op 3 . - CDS 375089 - 375697 565 ## COG1309 Transcriptional regulator - Prom 375736 - 375795 5.9 + Prom 375793 - 375852 7.6 359 150 Op 1 . + CDS 375886 - 378042 183 ## PROTEIN SUPPORTED gi|82703189|ref|YP_412755.1| 30S ribosomal protein S1 360 150 Op 2 . + CDS 378078 - 378944 1202 ## COG1284 Uncharacterized conserved protein - Term 378874 - 378908 -0.8 361 151 Op 1 1/0.056 - CDS 378964 - 379155 281 ## COG1827 Predicted small molecule binding protein (contains 3H domain) 362 151 Op 2 13/0.000 - CDS 379168 - 380028 569 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 363 151 Op 3 10/0.000 - CDS 380000 - 381319 1119 ## COG0029 Aspartate oxidase 364 151 Op 4 . - CDS 381334 - 382239 975 ## COG0379 Quinolinate synthase - Prom 382291 - 382350 6.4 365 152 Tu 1 . + CDS 382740 - 383375 933 ## COG3601 Predicted membrane protein + Term 383430 - 383491 5.5 - Term 383424 - 383470 5.4 366 153 Tu 1 . - CDS 383507 - 384250 586 ## COG1342 Predicted DNA-binding proteins - Prom 384295 - 384354 5.4 367 154 Tu 1 . - CDS 384356 - 384727 528 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 384757 - 384816 6.0 + Prom 384753 - 384812 7.0 368 155 Op 1 . + CDS 384833 - 385447 698 ## gi|225571642|ref|ZP_03780638.1| hypothetical protein CLOHYLEM_07740 369 155 Op 2 12/0.000 + CDS 385460 - 385885 534 ## COG0802 Predicted ATPase or kinase 370 155 Op 3 . + CDS 385873 - 386577 186 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 371 155 Op 4 . + CDS 386574 - 387608 1137 ## COG2008 Threonine aldolase 372 155 Op 5 . + CDS 387626 - 388069 217 ## PROTEIN SUPPORTED gi|238926143|ref|ZP_04657903.1| SSU ribosomal protein S18P alanine acetyltransferase + Prom 388072 - 388131 3.5 373 156 Op 1 . + CDS 388175 - 388402 323 ## Closa_0626 hypothetical protein 374 156 Op 2 . + CDS 388417 - 389322 1065 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 375 156 Op 3 . + CDS 389310 - 390365 844 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 376 156 Op 4 . + CDS 390396 - 391121 342 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 + Term 391310 - 391350 7.2 + TRNA 391210 - 391295 62.4 # Ser TGA 0 0 + Prom 391212 - 391271 80.3 377 157 Tu 1 . + CDS 391492 - 394926 2720 ## COG4932 Predicted outer membrane protein + Term 394969 - 395020 15.1 + TRNA 395119 - 395208 63.6 # Ser GGA 0 0 Predicted protein(s) >gi|224461043|gb|GG657761.1| GENE 1 255 - 551 174 98 aa, chain + ## HITS:1 COG:pli0034 KEGG:ns NR:ns ## COG: pli0034 COG0640 # Protein_GI_number: 18450316 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 4 74 2 72 97 79 45.0 2e-15 MNNEYTKDAGIFKALCDEKRLKVLNLLRSGEKCACVLIDDMSIGQSTLSYHMKILCDSGI VVSRQEGKWTYYRLSESGSRYALERLLKITTPEISNTK >gi|224461043|gb|GG657761.1| GENE 2 629 - 1642 767 337 aa, chain + ## HITS:1 COG:MTH894 KEGG:ns NR:ns ## COG: MTH894 COG0701 # Protein_GI_number: 15678914 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanothermobacter thermautotrophicus # 33 331 20 325 327 266 46.0 5e-71 METLKIIFLFIQDEILGMKWLNDLIQKILISAGINIDSKVGASIHFFIYDIIKISVLLCI LIFIISYIQSYFPPERSKKILGRFHGVWANIVSALLGTVTPFCSCSSIPLFIGFTSAGLP LGVTFSFLISSPMVDLGSLVLLISIFGTKVAVAYVIVGLVIAVVGGIFIEKLHMEKYVED FIKKEDSVDIESPTLTKRDRVQFSKKQVIETLKQVFPYIVIGVGIGAFIHNWIPESWIET VLGSKNPFGVVLAALVGIPMYADIFGTIPVAEALLSKGAQLGTILAFMMAVTTLSLPSLI MLRKAVKPKLLALFIAVCTMGIVIVGYLFNLFHAFFI >gi|224461043|gb|GG657761.1| GENE 3 1793 - 3160 487 455 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 8 449 4 444 458 192 27 2e-47 MSGKRKSYDAVVIGFGKGGKTIAGALGSAGKKVAMIEQSTKMYGGTCINVGCIPTKSLVN SAKEAAFGCRDGREVYAEAVQRKAQLVEKLRGKNYQKLAGDPNITVIDGKARFVSPHEVE VDTAEETLIVSGEQFFINTGSVPFIPPVKGIENNPYVYLSETLLDMEELPERLVIIGGGY IGVEFASIYADFGSKVSILQDGPVFLPREDEEIAREVRGSLERRGVRVLTEVKVEEVKEA SGHAEVVISTKEGTDLLEAEAVLAATGRRPNTKGLNLEAAGVQVNERGGIITDDSRTTTA PHIYAMGDVVGGLQFTYISLDDYRIVRSKIMGDGSYTLDKRGAVPYSVFLNPPFSRVGMS EAEALKAGHKVKTARLGAAAIPKAQVLRQPEGLLKAVIDEDTGRILGAHLFCEESHELIN LVKIAMDAGLHYTVLRDMIFTHPTMGEALNDLFNV >gi|224461043|gb|GG657761.1| GENE 4 3290 - 4663 921 457 aa, chain + ## HITS:1 COG:CAC2596_1 KEGG:ns NR:ns ## COG: CAC2596_1 COG0665 # Protein_GI_number: 15895855 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Clostridium acetobutylicum # 4 370 2 370 399 394 49.0 1e-109 MQKKSYWNETVSIPARNPLAGDISIDTVIIGGGMAGILTAFLLKKKGRECIVLEAERIGG GQTGCTTAKVTSQHNLIYADLIKTKGEVLARQYAQANEAAIREYESVIRQNKIDCDWKEC PAYLYADRKKTELHNEYMAALHLGIPARWTEDTELPFRVEGALRFDAQARFHPIKFLKAV SDEVTVFENTKVIKVTDNGVETDKGNVQAANIVFACHYPFVNIPGYYFMRMYQERSYVLA VKGAPPLNGVYLGVDQDSLSLRTAGELLLIGGEGHRTGEDTCGGQYGKLKSAAARWWPDS KEAYRWSAQDCMTLDKVPYIGRYSRRKQNWFVATGFQKWGMTSSMVSAMILSDMITGEKN RHEEVFSPQRHIGQDAAGNVCKESGHTAVTLTKPSGLPEDKKEKVRTTRCSHLGCHLSWN PEEKTYECPCHGSRFDCRGRVIDGPAQKDITAGGGDE >gi|224461043|gb|GG657761.1| GENE 5 4660 - 5535 532 291 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1141 NR:ns ## KEGG: Cphy_1141 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 2 286 9 315 319 230 38.0 6e-59 MKKYPYFEGWYLKHQANGEMIAFIPAVHAGITGEWEASVQVITGEGAWNFPYPVSECSID KKNFRIKIGDNLFSKKGIKVDLKNREMSIKGGISYGPFTGLKKDIMGPFRLLPFLECNHG VVSMRHRARGSVTVNGKTLDMTGGTGYIETDWGHSFPKEYVWTQCLFNGKQEGSIMLSAA DVPLWGRSFRGVICAAYLGGHMYRMATYLGARIVRYNEREVYLKQRKLFLKVTKLGERSF GLYAPQKGSMSRIIRESPVCRVRYQMWYGKKSILDITDNNASFEAVRAQQP >gi|224461043|gb|GG657761.1| GENE 6 5635 - 7017 1546 460 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571260|ref|ZP_03780256.1| ## NR: gi|225571260|ref|ZP_03780256.1| hypothetical protein CLOHYLEM_07355 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07355 [Clostridium hylemonae DSM 15053] # 1 460 1 460 460 761 100.0 0 MKKKLQNVRLLGLVLAAVVLMAGGCGKKATPENLLSDMSKNCAEIKSASSNMKLAAEMGD NTDTMALNLDVDIVSTKKPEASHMEGKISFKFSGTDMGTDIEVYQVKEKDEVVSYLNVQN EWTKQITEAGENLLDEELYEELKEAYESFELKKDLVEVNDKKCFELSGKVDGGILSGIID QDVLDSATSGMDLDADAIKDAKVPCVIDIYKESVLPAKIRVDMKDILTKIMGDKYEGFEV KDYYIEIVYNEYDKAEKIKVPKEAKEAEEAGNSSDWDDDGDDAGQAAAEPVKQSKELGEN WDSYTVQIGEKVVTFPCSISDLEAAGLALDTEDTPEDTAVEADDYILVYFEDKKGNEIMV DLINTSGEPIKAADCLVGGISVDDFGLEEGGLDILFPGGITIGAAKEDVLAKYGEAADTY EGESMHMFTWADESSYDRLCEIDIDPETNKVCEMSIRKYD >gi|224461043|gb|GG657761.1| GENE 7 7170 - 8303 873 377 aa, chain + ## HITS:1 COG:no KEGG:Closa_3889 NR:ns ## KEGG: Closa_3889 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 10 365 4 345 349 320 47.0 6e-86 MEGMREKDIKHRDSSMRRMTAGCILFAAGLLLLFAAKKVPGLADWYSQHIYRKLARVIGW AAGLFPFSLAEIGLYIFIVTLAALAARTALKALRKQGGRGAVSRFLSGVFLTGGVLFFLY AVNCGVNYERTSFSESADLKTREYTAEELKEVCLWLTDEVNEISGSVGRGNDKVMTLDGN VKEGAVEAMEGLGGTYPELAGHYPVPKPLINSWILSVQNLTGIYSPFTVEANYNNAMTAY NIPFTACHELSHLSGFMQEQEANFIAWLACTNSSRADFQYSGRLMGWIYCMNILHKADYE AYEEVRAGLSSDIEPDLQANHDFWEKYDGRIAEVANQVNDTYLKANGQKEGVESYDKMVD LIVAYYFAHEDQGQSRR >gi|224461043|gb|GG657761.1| GENE 8 8313 - 9068 727 251 aa, chain + ## HITS:1 COG:no KEGG:Clos_0031 NR:ns ## KEGG: Clos_0031 # Name: not_defined # Def: D-proline reductase (dithiol) (EC:1.21.4.1) # Organism: A.oremlandii # Pathway: Arginine and proline metabolism [PATH:aoe00330] # 6 250 9 252 253 256 48.0 8e-67 MNTGSRLTVRAYHVNSVLYGDENRVNVDGTMTVRRETGKELMEREPLIRDIQIRIIRPDE HRQHTNTVMDVIPLSAKVLGKVGEGITHTLTGVYVILTGIDESGRQVCNFGASDGILEDK ISWGQAGTPLESDILISFDVVLKENTWAERTGPEAIHRACDSFCQIFREQMKRFNGYKCT EKHVFQETYEPGRKDIVIVKEVSGQGAVYDTRLFGKEPGGYAGGHSVIDMGCMPVIVTPN EFRDGIMHAMD >gi|224461043|gb|GG657761.1| GENE 9 9100 - 9588 573 162 aa, chain + ## HITS:1 COG:no KEGG:CLK_1856 NR:ns ## KEGG: CLK_1856 # Name: prdE # Def: PrdE protein # Organism: C.botulinum_A3_LochMaree # Pathway: Arginine and proline metabolism [PATH:cbl00330] # 1 159 1 155 156 160 50.0 1e-38 MGLGTSMKETTLHYYRDPLVEILSEDEEVNLRGIMIVGSPDKNEDKYLSAERVGVSLECM RADGAVFSCNGIGNNHVDYAHSIEAAEKRGIPVVALSLCPAEDFVVQNKYMDGVLCFYKT SDKASQAGDETTVLAENTVTETDARKALAMLKLKIRKREKKG >gi|224461043|gb|GG657761.1| GENE 10 9622 - 10254 735 210 aa, chain + ## HITS:1 COG:MJ0455 KEGG:ns NR:ns ## COG: MJ0455 COG4887 # Protein_GI_number: 15668631 # Func_class: R General function prediction only # Function: Uncharacterized metal-binding protein conserved in archaea # Organism: Methanococcus jannaschii # 45 208 29 189 193 143 51.0 2e-34 MDKLKKLSCIDCAVTNCNDGDGEFPSFCLTTHMDEEALADAMACYKEDENKKTMVAAAEV EFEHYCQYTRVEEIMDFARRIGAHKIGIATCVGLIRESRMLAKIFRKHGFEVYGVGCKVG TIPKVDVGIPKKCEGVGTAMCNPILQAKLLNKEKTDLNVVVGLCVGHDSLFYKYSDALVT TAVTKDRVLGHNPAAALYNAQSYYKGKLGL >gi|224461043|gb|GG657761.1| GENE 11 10347 - 12548 1553 733 aa, chain - ## HITS:1 COG:CAC2947_1 KEGG:ns NR:ns ## COG: CAC2947_1 COG0550 # Protein_GI_number: 15896200 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 2 626 3 618 618 726 58.0 0 MKSLVLAEKPSVARDIARVLHCKKQIPGAMEGDKYIVTWALGHLVTLADPEGYDKKYKEW NMSDLPMIPKKWELVVIKQTSRQYQSVKTQLFRKDVSDIIIATDAGREGELVARWILDKS GCHKPLKRLWISSVTDKAIREGFANLKDGRDYNALYHAAKSRAEADWLVGINATRALTCK YNAQLSCGRVQTPTLAMIARREEEIRQFTPKEYYGLECTAGKIKWTWQESKSGSCRCFNK EFMENISSCIKEEPLKIEAIKKTAKKAFSPGLYDLTELQRDANRRFGFSAKETLNIMQRL YENHKVLTYPRTDSRYIGTDIVPTIKERLKACSVGPYKSVAGRLINKPVQVNKSFVDDKK ISDHHAIIPTEEYVQLDHMTNEERKIYDLVVRRFLSVLYPPFEYEQTTMTADAAGQIFAA RGKVVRSMGWKAAYDEKWDDGEDSGDNTVEPELADQSLPELTKGQTFHISAVRVTTGRTK PPARFTEATLLSAMENPVKYMDSSDAKARKTLGETGGLGTVATRADIIEKLFHSFLIEKK GREIVITSKGKQLLELVPEDLKKPELTASWEMELSGIARGTHKDTDFLQDIQDYTKELIQ EIRQSGGTFRHENMTNTKCPQCGKRLLAVNGKNSRLLVCQDRECGYRETIARTSNARCPN CHKKMELIKRNDEETFVCSCGYKEKLSAFKKRREKEGAGVSKKDVQRYMKEQNKKSEPLN NPFADALAKIKLD >gi|224461043|gb|GG657761.1| GENE 12 13076 - 13516 286 146 aa, chain - ## HITS:1 COG:L170990 KEGG:ns NR:ns ## COG: L170990 COG0454 # Protein_GI_number: 15672558 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 1 146 1 146 147 159 60.0 2e-39 MEIIEVQERTPLLTEQLLLVWENSVRTTHLFLSNSEIENIKIYVPQALKEIPRLIIAKHK NGSPAAFMGIDGQKLEMLFILDAERGKGLGKKLITYGIENYSVNEVAVNEQNPLAKGFYE HMGFQVYKRTDHDEQGNPYPLLYMKL >gi|224461043|gb|GG657761.1| GENE 13 13564 - 14757 1012 397 aa, chain - ## HITS:1 COG:RSp1043 KEGG:ns NR:ns ## COG: RSp1043 COG0642 # Protein_GI_number: 17549264 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 99 395 162 465 466 144 30.0 3e-34 MNKKWELRKKNTLQLKITGIVGLILLAACLLLTANSLFSAQNYYGDYASLIQEGVNDYAS LVEAGIAEYDSGYDPDDKLPVLAENSTTAYRDASMKFSVQSVTAMAVIILLALAATYWAS GRTLRPLKQLIESVKNTDDQNLDNRVASEGVHGEVLLLNEAFNDMLERLEDAFLIQKSFA ANAAHELKTPLAVIKSSLQVLEMTPNPEQKDYEEFMENTGKSLDRIIKTVDGLLSLANLT EVPVDQDIELSSLLRQAVQEMSGSAEKTDVEIVLTCENDISVHGNPDLLYRAVFNLIENA VKYNIPGGKVLITLTADEQSASIRVSDSGIGIPTEALGHIFEPFYRADPSRSQKIPGYGL GLATVKMIADRHGGQISVESTEGSGTAFTLLLNISPA >gi|224461043|gb|GG657761.1| GENE 14 14750 - 15436 586 228 aa, chain - ## HITS:1 COG:CAC0653 KEGG:ns NR:ns ## COG: CAC0653 COG0745 # Protein_GI_number: 15893941 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 220 1 220 221 191 46.0 7e-49 MKLLLVEDEEMLSRTIAKGLEILGYAVDRAYDGEEALYLYGLNEYDLMILDLNLPKLDGM DVLRQIRKEDEEFRVLILSARNSLEDKVDGLDSGSNDYLTKPFEFKELEARIRSLLRRNF TTRNRVLSCGCLKLDTAAKRVYCGEKQVELTRKEYALLEYLFHHNDRMIRAEELIEHAWD SETDLFSNSFRFHIHSLRKKLDAAGAEGYIVSQRGLGYRLTYGEETHE >gi|224461043|gb|GG657761.1| GENE 15 15472 - 17832 1988 786 aa, chain - ## HITS:1 COG:SP1647 KEGG:ns NR:ns ## COG: SP1647 COG3590 # Protein_GI_number: 15901483 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Streptococcus pneumoniae TIGR4 # 172 786 5 630 630 283 30.0 7e-76 MKYKKFRQILAAALAAALLAGCGTPASDNGQSQNAASEASKSSAKKRSATVGELADYFVK AADGYNASVNREEILEGLKASEKATRLEMLVLAARAFGELPEPGAYAKLTAASAPDMSDV PKWAGDSLQNMASKGLLAASDLEAGDKKDTASIKDAAAIAARFYAFYGNNLKDDFYTSVN QQQLNTLPIPKGQESAGGSASVSANTDKELKDLITELINNKKEYAKGSIEQKIRDLYETC EDRETRDKEGIKPLKKYLDAVDKADSFSELNAAIARAVDELGMYANGLFLSIPTTDLTDS TVKVLQLMTPASELPEEEYDDPDGKAYKKHKDELTEKLTAVGEKKEDAERHAENIMKFEK SLAAHMSEQDDSGEIKEQKYYTPESLDKMMPHAEIGVFLSAIGLRSDVKMLVFDEKQFEE YTKWFKDKNLELFKSLEKIALLEGFSSLLSSDLAGKFGYTGVESGDTAVQSYLPEELGKL YTDRYFNADSKAEIEKMVHMMIDTFKDRVTRLDWMSDETKKEALKKLDSLTVLIGYPDKW EFSNARIRGLEEGGTYFENAAACEAAKHKRQMEELNQPADPRRFALSAFMVNAAANRNTN TLIFPAGILQAPFYDRNASFEQNLGAIGSTIAHEITHIFDDGGAQYDSRGNLNDWWNKKD YSHFKNLCKKAEEFYNGREVVPGAGADGRENLSENIADIGGIACTLEILSKMKDPDYDAF FRSYANQWVKVADYSTLAESTETDTHAPNKLRCNLVLTNFQEFYDTYGISEGDGMYTAPE ERIQIW >gi|224461043|gb|GG657761.1| GENE 16 18144 - 19562 1356 472 aa, chain - ## HITS:1 COG:SA1165 KEGG:ns NR:ns ## COG: SA1165 COG0498 # Protein_GI_number: 15926910 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Staphylococcus aureus N315 # 61 364 29 313 353 82 27.0 2e-15 MSNQAVEEITGKNKDILFHSVNINYDEFKTGRLAWDYEKFMDIVGLSMDDIRKIAAEVYV GNTPLVELNNINRLVRSISEPGKGARIFLKDEANNPTGSFKDRRALLPVYEAKRAGYPGV IASTSGNYGAAVASQAARRGLKAIICQEVYDDAGNGQPESLEKGRACEAYGAEVQQYTVG PEVFTYVILKLLDDLGYFSASLYLPFSIAGIETVGVEIMEQTVKLTGRQPDVVLVTHAGG GNFTGAARGLKKAGYTGKTVGISVNLADLDSHDDAVFARKSFSTGHTGYGFPSLYNPESV DVPLNAARPLRYMDEFYTVTQGEVYYATELLNQLEGLQRGPAGNTGLAAAISLAREMPED QIIVVEESEYTGAGKAHTAQLTFAEDHGVDVRIGTHEEEIPGTNIIIPASPADIKTIPVD LEQMRREYLKVNVKQRGIDDLTPEETAYLAAEMNMDTAGVKKMLEELHISVA >gi|224461043|gb|GG657761.1| GENE 17 19555 - 19872 426 105 aa, chain - ## HITS:1 COG:no KEGG:Nther_1167 NR:ns ## KEGG: Nther_1167 # Name: not_defined # Def: hypothetical protein # Organism: N.thermophilus # Pathway: not_defined # 1 100 1 100 106 99 49.0 5e-20 MKQTAKKNDWVRIMQIILTPDERLDSLPESTKKVPLKCWINGFLLDDTAEAGDNVTIETL IGRQVSGTLYEAWPQYEHGFGRQQPALIHAGNEVRRLMKEADKNE >gi|224461043|gb|GG657761.1| GENE 18 19847 - 20998 1254 383 aa, chain - ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 12 367 2 355 400 150 30.0 3e-36 MENKQHNTNKWIINCIRYAGMYVGAIIGAGYASGQETLQFFVSYGYVGIIGTLIAIVLFA WYGTMFMELGHKLHTNSHKEVFTYLCGPKIGAVFDWILVFFLFGVLSIMIAGGGASLNQY FGINLMVGRIIIAVLTVGTVILGFNSSLNALGFLSPVIVIATLAISIGTICTNFGGIADA GARMQNLEIAKATPFWWSSVFIYISYCVLPAVPALASIGNSEKDGKVIRRSGILGGSLLG VAILFMVLATLSRIVDVSAMEVPFLEVARQMSPVIGGIFAFILLFAVYTTSVPILYGFSI RFAEDGTSKFKILTLAAGCIAFAAGLVPFSKLVGTVYPLLGYLGLVIMAVGFYKTVIKRK DIKTISETDKEGVKTYETDSEKK >gi|224461043|gb|GG657761.1| GENE 19 21318 - 22019 852 233 aa, chain + ## HITS:1 COG:Ta1394 KEGG:ns NR:ns ## COG: Ta1394 COG1802 # Protein_GI_number: 16082371 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermoplasma acidophilum # 16 215 5 193 217 82 30.0 7e-16 MNKSELDKMLAENPFLVLSDVIYQSLYNDIIQLRMPPDSRLNESKIAEELGISRSPVKSA LSRLEKDGLVYKRSGKMLAVSWMTKEDGYNLYEARSALEGFAASLAVIRITSKQMEELEL LTKQYVAVCNGSNSDLNPNDYAEIDHKFHSLIVTASCNPYILRMYKSLEGYLLHYRYCLF YSLGPEKLQRILFHAGKRHQAIFNAFKMGFTDIVRHEVEEDVHSMLNAFNQWD >gi|224461043|gb|GG657761.1| GENE 20 22216 - 23562 1274 448 aa, chain + ## HITS:1 COG:FN1789 KEGG:ns NR:ns ## COG: FN1789 COG0534 # Protein_GI_number: 19705094 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 448 10 457 459 207 29.0 5e-53 MTKDRAFYRNFFSIFTALVLQNVITLSVNLADNIMLGAYSETALSGVAAVNQIQFVYQQV LMALGDGLVIFCSQYWGRRQTGPMKMISASAMRTALVIAALLFAAVSLRPGQIVGLFTTE QSIIAEGVKYLYIVRFTYIFFAVTVILLATLRSVEVVKIALYLSVMTFFINCSINYVFIY GRFGAPQLGAAGAAVGTLTARIVECTVLITYIVKKEKNLQLTIRGYVQRDPVLSMDYFKV CLPMVAVQGLWGLNTALQTVILGHMSAAALAANSVASTSFLMVKSAAAGASSAASVVIGK TVGLGDLELVKRYAVRLQKIFLVIGAASAVLLYFIRIPVLSLYDLSPAAKDMANTFLIIL SVVCAGMSYQMPTNNGIIRGGGNAVFVVKMDLVSIWMIVIPLSLYMAFVVKASPAVVVCC LNADQIFKCVPAYLESHYGNWIKKLTRE >gi|224461043|gb|GG657761.1| GENE 21 23573 - 24118 422 181 aa, chain + ## HITS:1 COG:Cj0620 KEGG:ns NR:ns ## COG: Cj0620 COG1451 # Protein_GI_number: 15791980 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 29 178 36 213 215 80 25.0 2e-15 MIHEVNGIPVTIEYRKVKNINLYIKPPDGRILVTAPRQISTKRIMEFVNSKAGWIERARG RMLQAEQRQQEERGTGVTQEQLGIMLRNVEKYVDKWEPVMGVHAAGWTLRDMKTRWGSCS VDSGRIRLNRRLALYPEACLEYVIVHELCHLLEPSHNKRFKQLMDSFLPDWKERKKQLGT G >gi|224461043|gb|GG657761.1| GENE 22 24185 - 25357 1082 390 aa, chain - ## HITS:1 COG:RSp0310 KEGG:ns NR:ns ## COG: RSp0310 COG0477 # Protein_GI_number: 17548531 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 4 368 45 412 450 125 28.0 1e-28 MKDWKKKSILFLVSQNISLFGSSIVSYAITWYITLETSSGIWMTASILCSLLPQLFISLF AGVWADRYNRKYLIMCADGFIALATLGLVIMFFEGKASLPMLMVVSAIRSVGAGVQTPAV GALLPQIVPMEKLTRINGINQTCSSLLMMVSPAVGGALLGAAGIVWAMMADVITAAMAIC VMAFLKVKKPESEGVLSMWHDLKEGISYTTGHPVVSRILIFYGIAFFLITPAAFLSPLLV ERIFGSEVWRLSANEIIWTAGSLAGGVYVSWKGSFKNKWLVIAVSYIGFGVTFALLGISP YFWMYLAVMFISGVFMPSLATASTVMLQEEVEEQRLGRVFSVFQIISAAVMPAGMLLFGP MADWIDIRWIMAGSGLLLALTGVFLLKHKS >gi|224461043|gb|GG657761.1| GENE 23 25876 - 27009 1103 377 aa, chain + ## HITS:1 COG:CAC1426 KEGG:ns NR:ns ## COG: CAC1426 COG2508 # Protein_GI_number: 15894705 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Clostridium acetobutylicum # 28 351 28 367 397 87 21.0 6e-17 MAVELEDLYAEIKPQYDIKLHTSGCFRRMIDWIHMVEEVSFVSLLHGDELVFNSGLHYTS EEWLIQFIKELDKVHAGGLIIALDEGHMFAKETVAYCNSIRFPLFSATMASPFIDIMRMF SAILLRNEQRDTNLIAALKNAVFYPENEESYTSHLERNGFFRNMSYLIVMLSCHTYDTEN GNERLSNLHKSLNHALKSGIVYEEKGRLIILFAGYDRKRIREKMEALCRKDHNIYVGIGS QEEDMQHISKSYHNAYTAYQLTKTAINKNFLVYEELGVYKILADVNDTEIYPSFVQETLG ALLAYDADNGTEYTKVLEAFFENECSILNTSRVLYCHKNTLTYKMNKIKNLLGYDILSNE NRTRIMVAFYIIKMQKN >gi|224461043|gb|GG657761.1| GENE 24 27168 - 27806 719 212 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0179 NR:ns ## KEGG: EUBREC_0179 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 212 1 211 211 273 60.0 3e-72 MDINRVKRNELLGARIIKGLESRNMEGYYAQTKEEALAKALELIPEGSSVGWGGSMSIKE IGLKDAVCTGNYKVFNRDVCKTPEEKRQVELATYDCDFFITSANAITEDGVMVNIDGNAN RVSAIAYGPRSVVMIVGMNKAVKSVEDAVSRARNEAAPINAERFDLDTPCCKNGMCFDCK SPDTICCQIMITRFSKVPKRIKVILVNEELGF >gi|224461043|gb|GG657761.1| GENE 25 28102 - 29004 799 300 aa, chain + ## HITS:1 COG:BH0724 KEGG:ns NR:ns ## COG: BH0724 COG2207 # Protein_GI_number: 15613287 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 3 298 4 291 298 147 31.0 3e-35 MADKVDLNVGMRENPSYCDKAFPVSMHTITKNDIFPKGRGFHDIHWHDEIQFTYVSKGSL KVQVEGNEYHLEEGEALFINGGLIHVTTDMSEDGEYVGFMFPEKILGFFAGSRMEQNYVL PYLNNYVLPALLIRKGTEEDEHILSRLTELKEVFGNVGETAFEYEVSVKLVDIWLQIIKN IEGSVRKVSVSYIRRQERMKKMMQFIIDHYMDAITLNEIAEVANVSVEECRRCFRDTIKE TPVHFLLSYRVIMGMELLRNTDLAVTDIAFRVGFNDTSHFIQTFKKKTGMTPKDYRNNIF >gi|224461043|gb|GG657761.1| GENE 26 29245 - 31638 1849 797 aa, chain + ## HITS:1 COG:pflD KEGG:ns NR:ns ## COG: pflD COG1882 # Protein_GI_number: 16131789 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 8 787 4 763 765 449 35.0 1e-125 MNEKQRERIQFMKERVVNTTPEMDLENARILTESFRETAGEPLAVQKAKSFRRQCMEKTV QIWEKELIVGCAGSKMRGGILSADTCWSILDKELETINERQYDPFYLRPEDKQMFLDVIK PFWEGRSTYEAWLKQIPEDCRNLRDTGQVYIDKKAVRGWGETTVGYTQIINEGIESIMDT VKAEREALDLTEPGAIDKDNYLQALLISAEGICMMAKRYADEADRLAAEEEDAERRSELL TIARTCRRVPRYPARSFQEALQSFYFYHISIFMEQNAAAYNPGRMDQYLYPYYKSDLEEG TITEEEGLELLECLWVKFAEPCVFQDATTARYSAGYPMFQTLCCGGIDSEGNDAVNDVSY MMLQATEDVQLYQPNLTVRYSMAKNPNRFLKKIAQVISLGTGFPAFHNDDVGIRMLMNKG IPLKEAFDWNPAGCVETNLEGRLRHYSAFADINLGGMIEFAMTNGVNRKSGRKVSAETGD PASFTEYGDFEHAVKEQLKFSIQACVKGSHVIDDICMDRVVPALSLSFRECVEQAKDYAW GGAKYNAGNGIILIGVADLINSMEAVKELVYEKKLVSMEDMVNALNADFEGYEEIRELCQ KCRKYGNDDEEVNEIASHMLTFIADEIEQYHSKFGQMTPGILPVSGNTPFGQDVGALPSG RKAWTPLADGISPNGGTDVSGPAAVLKSAASIPHARYVQGTLLNMKLEPDMVKTENGIQQ LMALLKSLCTLGVYHVQFNVIDRETLLAAQKKPEDYRGLLVRVAGYTAYFTELGKDVQDE IISRTAQSSFCGCGSAA >gi|224461043|gb|GG657761.1| GENE 27 31661 - 32440 559 259 aa, chain + ## HITS:1 COG:SPy2055 KEGG:ns NR:ns ## COG: SPy2055 COG1180 # Protein_GI_number: 15675825 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 3 236 2 243 257 161 37.0 1e-39 MGTRTGKVLRIEKSSIYDGEGLRTVVYVKGCPLRCQWCSTPESQLVECMMDYGYDATPES ILKEIRKDEVFFFHSGGGVTISGGEVMLQSDFVRDILAGCKEDGLNTAIESSLFGSYEAL EKLLPYLDTVFVDFKIEDEELHRKYTGVSNAGIKENIRRLNDSFKGNIHVRIPCIPTVNM TEENMEMTAVFFRNLKNINDIELLPYHRLGIETYRKLGKEYILSDVETPSDSDMKELASK LSAFDPGCRILIAGRGVNP >gi|224461043|gb|GG657761.1| GENE 28 32510 - 33376 832 288 aa, chain + ## HITS:1 COG:no KEGG:CLOST_2227 NR:ns ## KEGG: CLOST_2227 # Name: not_defined # Def: conserved hypothetical protein (prdg) # Organism: C.sticklandii # Pathway: not_defined # 22 285 21 284 291 208 46.0 2e-52 MILRIIQIILVAYAVIAGVIIVKDYMKNKEQGVSRGETFLHYVIGLVVNFFDALGIGSFA TTVTAYGLFRLVEDKKIPGTLNAGVAIPVIFEALLFTSSVEVEFTTLIPVVICGVIGAAI GNRIVSKISEKTVTIVMAAALLTAALLMFGGKVGFLPSGGDAIGLTGIKLVIACVGNFIF GVALCFGVGNFTPCMCMVYMLGMSPLVSFPIMMCTGAVSTPTTGLMSLKQGLVDRHAVLG LTVGGIFGVAVAVYLVKSMSISTLQWLVIAVVVYTSFTMFKRAMKKVS >gi|224461043|gb|GG657761.1| GENE 29 33404 - 34192 991 262 aa, chain + ## HITS:1 COG:CAC3252 KEGG:ns NR:ns ## COG: CAC3252 COG0345 # Protein_GI_number: 15896497 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Clostridium acetobutylicum # 2 259 4 262 270 182 40.0 4e-46 MKLGVIGCGLMASAIMEGIVNNKLMNPEDITAADKFEASRERAKKNIGVCVTADNKEAAG QDILLIAIQPELYPAVLEEIKETVRANGTIIWTIAAGVTLAEVHQHVGSDVKVVRTMPNT CATVGAAVTAVVANDNVTEEEVHTLMGLIGGFGIAEQLDESKLNGIIPVTGSSPAMVFML IDAMANGAAREGFTWDQAVKFSAQAVKGSAEMVLKSGRHPAALQNQVCTPGGITIEMVKR LEAFGFRNAVMEAMQACTEDLD >gi|224461043|gb|GG657761.1| GENE 30 34416 - 35651 1127 411 aa, chain + ## HITS:1 COG:FN0781 KEGG:ns NR:ns ## COG: FN0781 COG2966 # Protein_GI_number: 19704116 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 248 5 253 256 99 26.0 1e-20 MDYNKLVQGILDIGEEMLICGAENFRLEDSLYRMCRSYGFKRYDVFAIPSNIQITVETPE GDIITQVRHIETTDIDFDRLDYLNNLSRYVCQNKPDAEQLLEKFEEVMGRSPQKWYTKYF AAVMGGTGFAVFFGCNFADAAVAAVVSLMIVLVGGWLSKREENLLAYNLILSFFSEVIII AAVRLGLGSHPERIMIGIVMLLISGLSTTNGIREVLQRDFISGFLNVMNSMLGAAGIAFG TALAMLLLDGVSAEGYVLNHNITIQLISCTIACIGFAFWFKIRGRQVAYSGIGAFFTWGI YVVVYHFWPSNFVATLIASIFVAFYAFIMSRINKAPSTIFLTASVFPLIPGPNLYYMMYG CVSRDYGMAVGETIVLLATCLAIAFGFNIVDILSRTAMKMLKREYHIGKNS >gi|224461043|gb|GG657761.1| GENE 31 35654 - 36529 660 291 aa, chain - ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 283 1 282 291 207 36.0 2e-53 MEIRVLRYFLEIAREGNMSRAAESLHVTQPTLSKQMKDLEQELGKKLFRRGSKSVSLTDE GMLLRKRAEDILDMVDKTADEFKELDNITGGEVHIGCAESHQIKYLAKVIKIFKERYPLF RYHLTSGNTEQVTERLDRGLIDFAVIVEPPNLSKYNYLEVPEVNTWGLVMKKNDALSQKD SICIDDLTGLDLICSAQAMQADIPRWCGEKADMLNLSGTVNLVYNGSVFVKEGLGYMLSF DKLADTGSDSELCFRPLEPPLHTKMYVIWKKYQMFTPITQLLLDELVRHLK >gi|224461043|gb|GG657761.1| GENE 32 36747 - 37919 907 390 aa, chain + ## HITS:1 COG:TM0111 KEGG:ns NR:ns ## COG: TM0111 COG1454 # Protein_GI_number: 15642886 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Thermotoga maritima # 1 389 1 387 387 255 38.0 1e-67 MMKFNFNNPTDLYFGTGSLNELGSHTMPGKKALVLISNGRSTIENGYLDRTLAELKRAGA EAAVFAKIMENPVKEVIMEGADFARENGCDFIVALGGGAVIDSSAAISAMAVNEGVLWDY VCGGTGKCRPIINKGLPVVAIATTSGTGSEMNGFGVISNLETNEKIGFGGPAFTPVLAIV DPELMLTVPPKYTAYQGFDALFHNTEVMMSKGVNILSETIALSAIESIAKYLPRAVKDGR DLEAREHVAYGSTMAGITMQLTSTTAQHSMEHSMSAYHHELPHGAGLIMISKAFAEFFIE KHVCDEQFIKMAKAMGLKHADRPEDFITALVRLQEACGVADLKMSDFGFSADEAMTLAKG ARSMQGGLFEANPCEMTDEDCAAIFEKSYC >gi|224461043|gb|GG657761.1| GENE 33 37937 - 38500 320 187 aa, chain + ## HITS:1 COG:MA0410 KEGG:ns NR:ns ## COG: MA0410 COG0110 # Protein_GI_number: 20089303 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Methanosarcina acetivorans str.C2A # 11 185 15 189 191 172 47.0 4e-43 MDKQEFLDYMRQGRAIAGGSHLHQFMHELAQEAMQITAELNNQCHEPGEMRALFAELTGK PVDETFSMFPPFYTECGKNIFIGKNVFINCCCHFQDHGGIYIGDGTLIGSHVVMATINHG QDPSERSDSFPAPIQIGEKVWIGSHATILPGVTIGDHAVVAAGAVVTKDVPADTVAGGVP AKCLKHI >gi|224461043|gb|GG657761.1| GENE 34 38544 - 39110 382 188 aa, chain + ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 57 183 7 144 179 89 35.0 2e-18 MKRSKAFTVFFMMVTLMFTMTACGNENEQQTTDLSKNEMTANEDGEDTMKNEDPAADNIL VAYFSATGTTKSLAQYAAHILNADSYEIVPEDPYTEEDLAYDTDGRADREQKDSSARPAI AGGIEHMERYDTIIVGYPIWHGQAPRIINTFLESYDFSGKTILPFCTSHSSGLGSSDTDL HPLASNSK >gi|224461043|gb|GG657761.1| GENE 35 39174 - 39437 212 87 aa, chain + ## HITS:1 COG:SPy1693 KEGG:ns NR:ns ## COG: SPy1693 COG0656 # Protein_GI_number: 15675551 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Streptococcus pyogenes M1 GAS # 21 86 5 71 279 75 55.0 2e-14 MKIVSANTGKAYSFDLENRKVMLNSGYEMPVMGLGTYSLSDEECYDSVTVLLEAGGRLID TAYMYHNEEAVGRAVRDSEVPREDILS >gi|224461043|gb|GG657761.1| GENE 36 39373 - 39570 56 65 aa, chain + ## HITS:1 COG:no KEGG:Spirs_1777 NR:ns ## KEGG: Spirs_1777 # Name: not_defined # Def: aldo/keto reductase # Organism: S.smaragdinae # Pathway: not_defined # 26 65 439 478 480 74 77.0 1e-12 MRKLSGGLYATRKSRGKIFCHNKAAVIPGSGNPNHIRENLDLFHFELSEEEMERINALDR NEKHD >gi|224461043|gb|GG657761.1| GENE 37 39683 - 40864 1236 393 aa, chain - ## HITS:1 COG:MA2145 KEGG:ns NR:ns ## COG: MA2145 COG4175 # Protein_GI_number: 20090988 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 4 392 3 392 491 371 47.0 1e-102 MESKDNVIEVQHVTKLYGLNKPEAVHMMKNGSTKKEVQKKTGVSVALWDINMKIPRGQIF VIIGLSGSGKSTLVRCFNQLNKPSSGRVLFEGKNLTDLSQKELLQFRREKISMVFQSFGL MSHRDVLGNVAYGLEVKGIPRAEREKTAMEVISMVGLNGWEHESCASLSGGMRQRVGIAR ALANDPDVLLMDEPFSALDPLVRQDMQFELLQIQRKLKKTVIFITHDIDEAFKLGDIVAI MKDGKLIQTDTPEQMSEHPADEYVEAFINNADKSRVLSVHNIMITPKALIREDDGAEHAI RVMKKNELSTVYVVDADLHLAGILTIADALDAKKNNLSIKHVIHRDIPTADTDALVGDIM GLAAEAPYPIAAIGKDGQLKGIVTKAKVLSSLT >gi|224461043|gb|GG657761.1| GENE 38 40880 - 42739 1871 619 aa, chain - ## HITS:1 COG:AGl2064 KEGG:ns NR:ns ## COG: AGl2064 COG4176 # Protein_GI_number: 15891149 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 334 612 34 313 317 255 47.0 1e-67 MKKLLSLFAALSITVMTCAPPVSAADEKKEIVFADVGWDSIELNNAIAGLIAEEIFGYTW SEVPGSTPITHEALINSEIDVNMEEWTNNITTYQEDLNAGKFTELGINFDDNYQGLYIPA YVAEKYPDLKNVKDLAKYPELFADPEDPDKGVIYGGIPGWEATEIMQKKINAYGLDEYYN YVVPGSTPALDSVITSAWDKKEPFVAYYWEPTWLMGKYDLVLLEDSPYDAATYKDGIGAC PAVTVTIAVSNDFAQSNPEFCDFLSKYHTGSQLISEGLAYMQDNKADHSEAARWLLTQHP ELAEEWLTPDQEKTLAASLGAGKGSEKTDWFSGFPLVHKPNTDAIDGAVRSFAVSAAPVL EKIQSLLGGMVNGFKWLLEHIPWFLFLILVFLAGWRVRRKLQSGILYAVILCLVGVVGFW DEMILTLSIVLASVVLALLFGLPVGILISNSPRANRIVRPILDTMQTMPVFVYLIPALLL FGLGNASAVIATVIYAIVPVIRLTSLGIRQVDTEVVEAARSFGSTRWQTLFKVQIPQAIP TIMTGVNQTLMMAMAMVVTCSMIGARGLGMEVLNAVNRTEIGRGLVAGGCVVILAVVLDR LTQGWFGREKKDTETRSEE >gi|224461043|gb|GG657761.1| GENE 39 42781 - 43398 657 205 aa, chain - ## HITS:1 COG:CAC2851_1 KEGG:ns NR:ns ## COG: CAC2851_1 COG2188 # Protein_GI_number: 15896105 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 8 115 8 115 118 78 37.0 1e-14 MKISKNIPVYAQVAYDIASQIANGKLKEGQRLSGRTLLSSQYGVSSETIRRAMNLLANMN VVDIRQNVGAVIASRALAIEYVQQCGIDNDLRGLKEQLKSLTLQRDQLNGEISSLFEKIM ALEERFQNSGHLRTYEFIIQADSRAAGKTIGELQFRQATGGTIIAVRENGDTQFSPDPQT VLQEGTMIIVACNAANLSYVSEFVR >gi|224461043|gb|GG657761.1| GENE 40 43561 - 45066 1302 501 aa, chain - ## HITS:1 COG:HI0928 KEGG:ns NR:ns ## COG: HI0928 COG0753 # Protein_GI_number: 16272865 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Haemophilus influenzae # 6 478 15 487 508 636 64.0 0 MENKKLTNEVGAPVAENENSLTAGPRGPVALQDVWLLEKLAHFDREVIPERRMHAKGWGA YGTFTVTHDITKWTKAKVFEPGKKTDVFVRFSTVAGERGAADAERDIRGVACKFYTEEGN WDLVGNNTPTFFLRDVHNFPDLNRAVKRDPRTGMRSAQNNWDFWTLLPETFHQTTIVMSD RGIPATFRHMHFYGEHTFSFYNAANERVWCKFHFRTEQGIKNLTDEEAAETVAADRESHG RDLFESIEKGEYPRWTMYVQIMTEEQAKHHYENPFDITKIWRHKEYPLHEVGVLELNRNP ENYFAEVEQAAFTPAHVVPGIGFSPDKFLQGRLFVYGDAQRYRLGVNYNHIPVNQAKCEV HDYHRDGFMRTDGNYGGAPAYSPNSAGDWAAQPDVMEPPLDLSGALYAFDPKDDPTDDCF RAGGELYRLMSEEKKTLLIENTARNIAPVTDNVKYRHAAHCCLADEDYGRRLTEAMGLDF AKVKELSALSHEELVKATLHL >gi|224461043|gb|GG657761.1| GENE 41 45299 - 45787 548 162 aa, chain + ## HITS:1 COG:CAC1992 KEGG:ns NR:ns ## COG: CAC1992 COG0315 # Protein_GI_number: 15895262 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Clostridium acetobutylicum # 2 156 3 157 161 156 55.0 1e-38 MEKLTHFDENGKAVMVDISEKQDTVREATAAGKIKVNEAVYRAIEAGGTEKGDVLGVAAT AGIMGAKKTSDLIPMCHILPISNCRITFDKDPEQKEIHCTCTVKVTGKTGVEMEALTGVS VALLTIYDMCKALDKTMEIGDIYLRRKTGGKSGEIKNEKGTR >gi|224461043|gb|GG657761.1| GENE 42 46078 - 46605 749 175 aa, chain - ## HITS:1 COG:no KEGG:bpr_I2296 NR:ns ## KEGG: bpr_I2296 # Name: not_defined # Def: flavodoxin family protein # Organism: B.proteoclasticus # Pathway: not_defined # 1 172 1 174 179 166 44.0 4e-40 MLEYLVLYESRSGNTKKLAAAIFSNLPGNSKDLIDITTDKSIPEAKVYFIGFWVNRGTCS MEVSDFISDLGGKSIALFGTCGMGDSPDYYKAIESSVNAWIESDNDYLGAFICQGKMPRK VREKYEAMRNTENEAQMNLYIRNFDEALTHPDSLDIEHAKVFTQKCLKKLNEMDN >gi|224461043|gb|GG657761.1| GENE 43 46632 - 47027 370 131 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3541 NR:ns ## KEGG: Cphy_3541 # Name: not_defined # Def: Zn-finger containing protein # Organism: C.phytofermentans # Pathway: not_defined # 2 131 4 133 133 113 43.0 2e-24 MKEKFIRFMSGRYGIDSFGKFTLILGVAALILSGWFDSFIFSVLAWVCVIYSYFRIFSRN VYKRAAENQTWLNKTYKVRSWFARQKNSASQRKVYHIYKCPSCRQKIRIPKGKGKIEVRC PKCSTTFIKNS >gi|224461043|gb|GG657761.1| GENE 44 47168 - 48451 1540 427 aa, chain + ## HITS:1 COG:ECs3990 KEGG:ns NR:ns ## COG: ECs3990 COG3681 # Protein_GI_number: 15833244 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 2 427 11 434 436 186 34.0 7e-47 MQELTILIREDMKPALGVTEPGAIAFAVARAREHTKGEVCRVRVALNSGMYKNAFTCGIP NSGHFGNLYAAALGAVAADASLGLQSLEHITEEDDARAAKLVEEGRVEAVLDHIGSEITI DASVLTDQDECTVHIRGGHTDITCIEKNGNVIFSAGETDAKEQTSGEETPLIHKYTLHGI LKYVKSVKEEEISFIRDAFTMNMDLLEEGIQSSKTKIVHHLLKENESRIISDDARKTAQL LCNGAIEARVLGLARPAMSITGSGAHGIIATMPLFAFYEVNYEVVDDDILLRATALSYLI TMYIKEYSGKLSAFCGCGIAAGTGMACGLAFMRNASEEQIAMVIQNMASGLTGMICDGGN QGCAMKGIVAVDAAFRAADMAMENVCIDNIHGINGKTPEDTMRHMGLIASPGMVETEKTI VEIMEHK >gi|224461043|gb|GG657761.1| GENE 45 48475 - 49275 986 266 aa, chain + ## HITS:1 COG:lin2285 KEGG:ns NR:ns ## COG: lin2285 COG4509 # Protein_GI_number: 16801349 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 58 256 44 241 246 115 35.0 7e-26 MGTDKKSTKHHRGRRKKRAKNSLVTNIVLAVAAVVFCISAFQLIKIVKGYMDGRGEYKEI ASLAVKNPDDKDKFRVDFDELMKLNPDTIGWLRFHPEPSIINYPLVQGKDNQEYLHKTFK ANDNTLGTIFLNVDNRADFADKNSIIYGHRMKDGSMFRHLWDYEDESFYRENPYFYIYTP DRREITYQIFSVSKVGDDSKAYMTSFGSEAQFEEVVQIIKEAGLYDTKVDVKGEDMIVTL STCTAESDDNRLIVCGVKKKEVILED >gi|224461043|gb|GG657761.1| GENE 46 49278 - 49466 220 62 aa, chain + ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 62 1 62 65 64 45.0 5e-11 MDFTYEIGDIVTMKKKHPCGSREWEILRVGADFRLKCLGCGHQIMIARKLVEKNTKDLRK KA >gi|224461043|gb|GG657761.1| GENE 47 49596 - 49883 353 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160881892|ref|YP_001560860.1| ribosomal protein S6 [Clostridium phytofermentans ISDg] # 1 95 1 95 95 140 66 7e-32 MNKYELAVVVSAKIEDDERAQVVEKVKALVERFGGSVTDVDEWGKKRLAYEIQKMKEAYY YFIHFESAAEVPGEIEQRIRIMDNVLRYLCVKQEA >gi|224461043|gb|GG657761.1| GENE 48 49905 - 50348 468 147 aa, chain + ## HITS:1 COG:CAC3723 KEGG:ns NR:ns ## COG: CAC3723 COG0629 # Protein_GI_number: 15896954 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Clostridium acetobutylicum # 1 104 1 103 144 113 54.0 2e-25 MNKVILMGRLTRDPEVRYSQGENPLAIARYTLAVDRRFKRDGEATADFISCVAFGKQAEH TEKYYRQGLKVTISGRIQTGSYTNKDGVKVYTTEVVVEEQEFAESKAASDANAGSFHQAA PAPAPVSDAGDGFMNIPDGIDEELPFN >gi|224461043|gb|GG657761.1| GENE 49 50391 - 50657 350 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160940069|ref|ZP_02087414.1| hypothetical protein CLOBOL_04958 [Clostridium bolteae ATCC BAA-613] # 1 85 1 86 89 139 77 2e-31 MAYDKGNRPEGGFKRRGGGRRRKKVCVFCGKENNEIDYKDVAKLRKYISERGKILPRRIT GNCAKHQRALTVAIKRARHIAIMPYVQE >gi|224461043|gb|GG657761.1| GENE 50 50811 - 51431 814 206 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3706 NR:ns ## KEGG: Cphy_3706 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 203 2 201 204 160 39.0 3e-38 MKKNTIITIGRQFGSGGHEIGNRLAERLDIPLYDRNLIQMAAKELGISHETAETVDETIL GKFLSAYVVNMGEYTTFASGEATEPLSDQVYQTQSDIIRRLAERSPCIMVGRCADHILEL DFNCINAFIYADKEDRMRRVMKIYNLNEKQAQDKMKKTDKERKLYYEAHTGRTWGSIESH QMLFNVSRLGIDDIVDVLAAMFRARR >gi|224461043|gb|GG657761.1| GENE 51 51503 - 53659 2213 718 aa, chain - ## HITS:1 COG:no KEGG:BCAH187_A2105 NR:ns ## KEGG: BCAH187_A2105 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_AH187 # Pathway: not_defined # 1 717 1 716 723 1091 70.0 0 MSKTKGRVTLPSESHFLKETREMLDRWGADALRDSDGTKLDDEIKSLDAKIYTTYFVARG HNEFAEKHMDECQQMLLMSKHNLALDTTVTIDFLDGYFREQVQADYVHDPKKWWEVIDRT TQEIVPLDSWSVDTDRHLVTVTDAVPFHEYTVSFFVYAIWDPTQMYNHITNNWGDKPHDI PFDVRQPASGAFARDYLKKWLADNPDTDVVRFTTFFYHFTLVFNADAKEKFVDWFGYGAT VSIRALEEFEQEYGYALRPEDIVDNGYYNTTFRVPTKAYRDYMEFIQKFVARKAKELVDL VHDAGREAMMFLGDNWIGTEPYGPYFESIGLDAVVGSVGGGATLRLISDIPGVKYTEGRF LPYFFPDTFYEGNDPCVEAIDNWLSARRALMRNPVDRIGYGGYLSLAYKFPKFVDYIEKV TDEFRLIYDNVKGKKPYCGLKVAILNSWGGLRSWQSYMVAHALWYKQTYSYFGILESLSG AAVDVVFMSFDDIRNNGIPKDIDVIINAGDAGTAFSGGEEWLDEKLITTVRRWIHEGGGF VGVGDPSAVHRGGRFFQLADVLGVDKELGFTLSTDKYFKDALDTHFITEDRTGCFDFGES RHDIYALSASTEIIEYSDNEVHLAANAYGSGRGVYIAGLPYSYENTRLLMRVLYFAAHKE ESFLRWYADNVNCEVNAYPESGKYAILNNSNEEQTTNFYDGEGTCEKLTLRPCEILWR >gi|224461043|gb|GG657761.1| GENE 52 53921 - 54544 470 207 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0670 NR:ns ## KEGG: Cphy_0670 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 33 201 3 167 170 120 38.0 5e-26 MEVKVIQSAKELETLSPFKVDNKLWGTKTAPVTYGYLGFIPDSGFCLKMVCEETDPLRKY TEINAPVYRDSAMEAFFQFESERERNIQPTYLNFEVNANGALLAAYGKERIYRTYFTREE HEEFACSAQIEKDRWSAALYIPLSVLEHIYGPLCLEAGSTFTCNFYKISEAAEIEHYASW SMIETDVPSFHLPEYFGNAVIAGSSPV >gi|224461043|gb|GG657761.1| GENE 53 54541 - 55455 777 304 aa, chain - ## HITS:1 COG:lin0157 KEGG:ns NR:ns ## COG: lin0157 COG2207 # Protein_GI_number: 16799234 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Listeria innocua # 32 291 28 271 277 78 23.0 2e-14 MGYNGVVLKDSITIGKIYSIHYFEYMSDFSFEGESHDFWEFICVDKGEVGVTGGSSFTVL KKGDVAFHQPNEFHNVKATGDSAPNLVVVSFQCRSEAMRFFKKRILRIDETERNLLASII IEARRCFDCRLDDPYLQNMPQKEPDMFGAEQLIRLFVEQFLIHIIRRYSNPIIFNKKLPK TAPQKTTKNRSDNEIFNRVVDYLESNIGSHVTIDQICRDNLIGRSQLQKIFKERSSLGII EYFSQMKIDAAKEMIRTNRMNFTQVSEHLGYTSIHYFSRQFKKVTGMTPSEYASSIKAMA EGSF >gi|224461043|gb|GG657761.1| GENE 54 55663 - 57018 1427 451 aa, chain + ## HITS:1 COG:AGl3153 KEGG:ns NR:ns ## COG: AGl3153 COG1653 # Protein_GI_number: 15891693 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 38 448 37 429 433 90 26.0 6e-18 MKKRVLSVLLCVTMIAAMVVGCGKKSDGDGGDKGGKKLVYWAMWSEGEPQAKVIKSAIEK YTKDTGVEVDVQFKGRNGQREGLQPALDAKQQIDLFDEDVNRVNGSWGKYLLDLEDLAKD FEAEHGNETLYKIARNAYAQNNDGDETLHSIPYQPSIFGFFYNKTLFDKAGIEAVPTTWE ELDAACAKLKDAGVTPITGDTTYMTSFMGYHLGRYLGQDGVKALVGDPAVADKVESGDID KVTWDDEKVVQAAKDIEDFAAKGYFSKNIASNIYPAGQNQEFAPGEAAIILCGSWLPNEI KVGENAEGEDKVEVADDLTWGYFNYPAVKDGKDDSTANNIANQVMAINKDSKMTKEAFEL ITYITAGDADKQMTTDALCIPADQANSDAWPEELTEVKPGFDATTTYYDWAVGAENNGDL TPVLNENVVKLMAGSMTADEFIKSCKDASGQ >gi|224461043|gb|GG657761.1| GENE 55 57121 - 58026 1023 301 aa, chain + ## HITS:1 COG:mlr7001 KEGG:ns NR:ns ## COG: mlr7001 COG1175 # Protein_GI_number: 13475831 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 11 286 35 301 317 105 27.0 1e-22 MKKNKGMIVGFLAPAVIIFLIVFLYPIVRTVMMSLYKIEAVTDTMDLWTFVGVQNYQKLF TTAIFKTAMTNIVKIWLIGGIIVMIVSLLFGVILTSGIRGKKFFRAIIYLPNIVSAVALA TMWLQYVYSPKFGLLKSVLDALGLHKLAETQWTAPENVFWALLLAYCFGMIGYHMLIWMS GIERISPDLYEAATIDGANKPQQFRFMTLPLLKGVFKTNITMWTVSTAAFFVWSQLFSSV TANRSTIVPVQYMYMQIFGAGNAVTERNAGYGAAIGIILCLCVVLVFTVCNKFIKDDDLE F >gi|224461043|gb|GG657761.1| GENE 56 58042 - 58926 952 294 aa, chain + ## HITS:1 COG:BS_yurM KEGG:ns NR:ns ## COG: BS_yurM COG0395 # Protein_GI_number: 16080311 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 25 294 38 300 300 134 29.0 2e-31 MSKNKEKKVREKINWKKEAKLAPGYIVIILWVVFTLMLLGWIIAASLSTTGDIFAGKALK FPSGLHFENYVEAWGSGGVATFFMNSLMYSIVSCVLLILICAPAAYVLARFTFLGNKIIQ TGFVSAMGVPITMIVLPLFCIVANMGILNNIVASKATLMFLYIGINIPYTTIFLLTFFAN LSRTYEEAAAIDGCPPTKTFWKIMFPMAQSGIVTVTIFNFINIWNEYFLSLIFANSDALR PVAVGLYGMLQSMQYTGNWSGMFAAVVIVFLPTFILYIFLSEKIIGGVTGGIKG >gi|224461043|gb|GG657761.1| GENE 57 58967 - 59893 990 308 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0139 NR:ns ## KEGG: EUBREC_0139 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 304 1 304 668 433 64.0 1e-120 MNKPVLVIMAAGMGSRYGGLKQIDPVDEEGHIIMDFSMFDAKRAGFEKVIFIIKRENEAD FRAAVGDRMEKYMEVSYAFQEIDNIPDGYQVPEGRVKPWGTAHAVLSCIDQIDGPFAVIN ADDYYGQEAFRLIYDYLASHEDDDKYRYTMVGYELGNTVTDNGHVARGVCDMNSEGELIA IHERTRIEKRDGGIAYTEDDGATWVSVPADTTVSMNMWGFTRSILDEIKAGFPAFLNEGL KKNPMKCEYFLPAVVSDLLGEDRATVAVLKSADKWYGVTYKEDKPVVMSAIKKMKDDGLY PAHLWEEA >gi|224461043|gb|GG657761.1| GENE 58 59893 - 61011 1258 372 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0139 NR:ns ## KEGG: EUBREC_0139 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 11 369 309 667 668 496 64.0 1e-139 MSQITREQRDEVIAHFQYEGMLVEECPYGSGHINDTFLLVFDIAEMGQIKVILQRMNKDV FEKPVELMENILGVTSYLRARIIENGGDPERETLNVIPTVDGKPYYLDSKGDYWRSYKFI TDATSYDQVEKPEHFYQSAVAFGNFQRLLADYPAETLHETIKGFHNTKARFATFKQVVEE DVMGRAASVQKEIQFVLDREETADYFCDLLDRGELPLRVTHNDTKLNNIMIDNKTGRGIC VIDLDTVMPGLAMHDFGDSIRFGASTAAEDEQNLDKVSCSMELFELYAKGYIEGCGGKLT KREIELMPMGAKTMTYECGMRFLTDYLQGDTYFKIHREKHNLDRCRTQFKLVEDMEQKWY TMQDIVNKYSNS >gi|224461043|gb|GG657761.1| GENE 59 61023 - 62042 1174 339 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 4 339 3 337 339 477 68.0 1e-134 MAKILITGGAGYIGSHTALELLNEGYEVVVYDNLSNSSRESIRRVEELTGKEITFYEGDV LDEAALEKMFEEEKADAVLHCAALKAVGESVQKPLEYYQNNITGTLSLMKVMRKVGVKNI VFSSSATVYGNPEIIPITEDCPKGQCTNPYGWTKSMMEQIMTDVQKADPDWNVILLRYFN PVGAHKSGRIGEDPKGIPNNLMPYISQVAVGKLEKLGVFGDDYDTPDGTGVRDYIHVVDL AIGHVKAIDYILTNPGLDIINLGTGVGYSVLDMAKAFGKASGKEIPYEIKPRREGDIAMC YADPAKAAKVLGWKAERGLDEMCEDTWRWQSQNPNGYNS >gi|224461043|gb|GG657761.1| GENE 60 62096 - 63625 1196 509 aa, chain - ## HITS:1 COG:BS_yesN KEGG:ns NR:ns ## COG: BS_yesN COG4753 # Protein_GI_number: 16077763 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus subtilis # 1 157 1 166 368 159 47.0 1e-38 MLKVLIVDDEKIIRETIADLIDWDALSLKLIGTAKDGIEAYNIILDEYPEIVLTDIKMPG LSGLDLIQRIHAVNKDTQFIILSGYGEFEYAKKAMQYGVRHYLLKPCNEEQIIDSLKDVR KDYADYLTSKDTPPQSFIARNMNLNLMVGIMNDSLSPETDKEFSYIFSNYKRYLDFDNVP YEIFYIYFVTPESYPLLLEKLQQFRDDICPGIVFNIIYVYNTLIFFFKSVNDDLGKIYNF LDTVVLDQSVTIKYRHDHCPNLSAMLKELIPHIKKYEIIYFTEGSNTLSIYNYQNIIKEV QRITASIYSPEKASSGQAFLELRSTLSSLSDADFLKQLASSVIIFSVARLRSFDMVDAAE FLIKLEKEKDCREISNLLDDQLTCFFEEYHSQKYTGDISHKIQEYVESHICDSGLSLKWI AENYLFMNVDYLSKRFLKETGCKFSRYLTDMRIKRAKEILASSDLDSIQNVADMVGCGNN PQYFSQIFKKSTGMSPSKYMKMLHGDAEY >gi|224461043|gb|GG657761.1| GENE 61 63600 - 65384 1395 594 aa, chain - ## HITS:1 COG:BS_yesM KEGG:ns NR:ns ## COG: BS_yesM COG2972 # Protein_GI_number: 16077762 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus subtilis # 7 583 1 571 577 246 30.0 1e-64 MKTKKTMMTRIANLQLGTKIVGILLIVILLMISSSIAGITMVLHSSNKLLYQALAGSLTY SAEDISRKISNIESMTSAIVSNSNIRKNLITLNDDESMIRTGNAKSSLETLLADYYQTYK NNNISYINLYYPGGVVQSYEAQSSSVPEQVHREVIAAANNVSGYPCAVTDYCNSYGLFLG RDSRRVEQMNFHRLGTVVVCVDMNRLIRSSTSSVLPSEETQYVLMDNGTEFYHSDGIGSE QLKDIHRRLRSDYGVVTVDSNRYFAVQGTIKNTSWEYICLVPYDHIFAALSFTMVLALAI ILISVLIAILLSRMLIRSVTEDFRRLVNKMKAFGKDESKAPDIGYDYSGRIDEIGVLHNQ FDQMTIKIQDLIQQNYVNEILSKDARLKALENQINPHFLYNTLEAVNWRAKAIGEKNISS MVESLGTLLRETLSSGSKNFTLSHELEIVQCYLTIQRIRFEDRLTYSQNVDPAILSVTLP HFTIQPLVENSVNYAMEKSTEVCHIWLEGSRHKDTIVIDVINNGSQFENDLLEKLENGLI TPHGFGIGLLNIHKRIQLTYGTGYGLTLFNKDEEHAVARIIIPGGTYAESIDRR >gi|224461043|gb|GG657761.1| GENE 62 65570 - 66625 1316 351 aa, chain + ## HITS:1 COG:YPO3633 KEGG:ns NR:ns ## COG: YPO3633 COG1879 # Protein_GI_number: 16123775 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 47 351 48 352 352 184 37.0 3e-46 MKKLVSVLLCIMLAAAMVTGCGSSDAGSGTGDKKTKETKETGEEKTADPEEYQVVMVVKQ SDSWFDDMATGVEQLKKDTGLNVSVQVPETGDAASQISIMEDLIAQGVDAICVVPNDPEA LVPTIEKARESGIVVVTHEAPGIAGDVDLDVEAFVNEEFGQLFGEKLASAMDGKGKYAGF VGGLTMETHMAWYKAAVAYIEENYPDMECVSKEPYEDGNSIDGAHDKALEILKAYPDIKG FFDCSAQGGGICETLQEKNKTDDIKVVSLALPSMSATYLEDGSMAAGLAWRPADAGYATC YAAYLLASGQKVETGTDLKITGYEEMEVKDGVAYGNAPLEFSSDNINDYNF >gi|224461043|gb|GG657761.1| GENE 63 66700 - 68223 187 507 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 270 487 18 231 245 76 25 1e-12 MGTVLEARHIYKSFVGVQALKDINIKIESGKIHCLAGENGCGKSTFVKNISGVYTPDSGE VVLNGSLYHCLTPAQAMKEGIQVIYQDLSLFQHLTVAENIAISRLKSDRKRIVNWKKVRE IAGEQLDKIGVRMDIDQPVGEISMANRQITAICRALAQDARILFMDEPTTALTKTEVDRL MKIMLDLKKKGLAVIFISHKLDEVFSVADTITIFRNGEKIGDFESKELDKKSLSYHMTGR EVEYPRYRRSVKDDTPVLEIEDLTRKGQYESLSLTVRSGDIVGVTGLLGSGRTELALSLF GLNPADSGRIKIDGKEAAISSPMAAKKLGIALLPEDRFRQGLFVDREVKENISSAIIDDI SGKGLLDKDREKKVAEDYTRQLKVRTPSVETAVGTLSGGNQQKVVIGKWTAAKPRVFIMD TPTVGIDIGSKAEIYEQIHKLAADGMSIIFISDEIQEIIANCNRVMVLADGRCVRMLEEE DLKENAEQTITELIGRHAEETAKGGAL >gi|224461043|gb|GG657761.1| GENE 64 68220 - 69209 1076 329 aa, chain + ## HITS:1 COG:YPO1815 KEGG:ns NR:ns ## COG: YPO1815 COG1172 # Protein_GI_number: 16122067 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 15 307 1 297 309 173 37.0 5e-43 MKIRKLDRFQGILLLIIILYSVFVAVKNPAFIHIETIFDITRVASTTLMVAIGLLVVMIS GGIDVSFMAVALFGSYTTINIMIGTGIDNLAFAFFSSALIGGILGVINALLISWLKLPPF IITLGTQNLFHGIMTTFISDKSFGAGVLPESLHSFGQASVFKIKDVGLTASVIPVLLAAL VTWFVLYRTMVGRGIFAVGNDEESARRAGFNPFRIRLFVYVYSGILAGIMGMMYVAQTNA LYPNKLVGDELIVVAAVVIGGTKITGGQGKIFGAVLGVIIIYLLNTTLIMIGLSSSWNNL FVGTILVISVAVTSYQEKVKNRNNLIFTE >gi|224461043|gb|GG657761.1| GENE 65 69221 - 70234 1168 337 aa, chain + ## HITS:1 COG:ECs0378 KEGG:ns NR:ns ## COG: ECs0378 COG1172 # Protein_GI_number: 15829632 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 17 311 13 303 318 181 36.0 3e-45 MNKVNKMIRRDLNLSILTGVTVLVLLWSAVSFGDAMYSLKNIQSMTFQIPEFGFLALAMM LSNMIGGIDLSIIANANTVAIMSAYILNGQWAFGLTGPARIAAAVIAALIVSLLFGLLNG VLISRTSAPPLIATLGTMTLFQGIGMAVTGGASVGNIDKGFAQMGKATLIQIPLIFWLFL AAAVILGMVMSKSKFGRKLYLYGDNPTASRFSAIDNDKMCICTFLLTGVLAGMAGLIVLS RVNSAKVGYGDSYLLQTLIVCVVGGIDPNGGKGRVGGVLIAVILMQILSSAFTIMSLSPY TKKLIWGIMLVLVLGLNYALKKYTNMTELRKSLKEGC >gi|224461043|gb|GG657761.1| GENE 66 70237 - 70806 661 189 aa, chain + ## HITS:1 COG:SA0529 KEGG:ns NR:ns ## COG: SA0529 COG0794 # Protein_GI_number: 15926249 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Staphylococcus aureus N315 # 10 189 7 182 182 109 33.0 3e-24 MSEEKYKELYKTILLEHEKVFEKQDLTELQQFMEHIKTAGRVFLMGVGREGIAARAFAMR LMHLGKEVHWIWDDTTPGMAAGDLFIAVNGSGKIGHIHYVTERAKESGAAVAVVTGGPKE KTPALADCVLFVPACVYNGTDDRAVPSVQPMGNLFEQHLFLLFDIIIIQLEEEMQLTHAQ MEARHRNVE >gi|224461043|gb|GG657761.1| GENE 67 70925 - 71776 792 283 aa, chain - ## HITS:1 COG:BH0594_1 KEGG:ns NR:ns ## COG: BH0594_1 COG2207 # Protein_GI_number: 15613157 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 1 127 1 127 127 174 59.0 1e-43 MEWIERLNKAVNYIEENITEELDYAQAARTACCSTYHFQRMFAFMAGVPLSEYIRRRRMT LAAADLQNKGAKVLDIALKYGYASPTAFNRAFQSIHGITPSSAKKEGAVLKSFPPISFQI TIKGVEEMNYRIEAKESFRIIGISEPLHKDIEENFSVVPGLWQKAAADGTIGALAKMMNG RPMGLLGVSACHDEDEWRYYLAVSSDMELTGSLEEYHVPAATWAIFTGSGTNRSIQELEQ RIVTEWLPGSGYEYADAPDIEVYLNADPDNAQYEVWIPVRQKD >gi|224461043|gb|GG657761.1| GENE 68 72020 - 74074 719 684 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein [Aster yellows witches'-broom phytoplasma AYWB] # 186 683 197 697 849 281 33 3e-91 MKENKKVQLKGQLRLYMQWPAIMALFLVAVNIWIYKLDRRAGTLMFIFLLIYIVMVGILY LYSKSVIMKDLVEFAAQYGIVQNTLLRELSVPYAILLEDGKAIWMNDKFEEIFGRKPKGE AYVSKYIPELNKNIFPKEEDEIVEMDVYYENREYKAVLRRVSVAGFSETEQLMELPEERE YFIAVYLNDVTELNVCKKENEEQRLVAGLIYIDNYDEVINSVEEVRQSLLMALVDRKINQ YIARVDGIVKKLENDKYFIAIKKQYFKKLEQDKFSLLEDVKSVNIGNGIPATLSIGLGLS NSAYSQSYNYARVAIDLALARGGDQAVIKDCSGITYYGGKREQTSKNTRVKARVKAEALR EFITVKEHILVMGHKLTDVDSFGAAVGIYRAAAALEKKAHIIINEVSASLRPLYEVYAND PAYPEDLFLNSQQAIDMADADTMVVVVDTNRPQMTECEELLRMTRTIVVLDHHRQSSDNI DNALLSYIEPYASSACEMVAEVLQYIVDDIKIPNIEASSLYAGIMIDTNNFMNRTGVRTF EAAAFLRRCGADITLVRKMFRDDMDAYRAKAEIISSAEVYEDKFAIARGTGLAIESPTII GAQAANELLDISQIKASFVLTEYNGKIYISARSIDEVNVQIIMERLGGGGHMNAAGAQLL DVNMDQAVEKLQEVIHDMVEGGDI >gi|224461043|gb|GG657761.1| GENE 69 74076 - 74525 456 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238925603|ref|YP_002939120.1| 50S ribosomal protein L9 [Eubacterium rectale ATCC 33656] # 1 147 1 147 148 180 62 8e-44 MKVILNEDVKSLGKKGDIVEVSDGYARNFILKNKKGVEANSKNLNDLKLKKANADKVAQE QYEAAKELGARIEEGSIKVSIKVGEGGKAFGAVSSKEISAEVKAQMGLEIDKKKVQLKET IKTLGTHNVPIKLHPKVTAELKVVVTEEV >gi|224461043|gb|GG657761.1| GENE 70 74538 - 75878 1593 446 aa, chain + ## HITS:1 COG:CAC3715 KEGG:ns NR:ns ## COG: CAC3715 COG0305 # Protein_GI_number: 15896946 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Clostridium acetobutylicum # 8 442 6 436 442 458 54.0 1e-128 MEEALIKRVMPHSVEAEQSVVGAMLMDKDAIMTASEIISGKDFYQSAYGVIFDSMVELFN EGKPVDLITLQERLKEKDVPAEIASLEFVKDLVTAVPTSANVKYYADIVSDKSMMRKLIK LNEEIANICYAGKEPLESVLETTEKSVFDLLQRRNTGDYVPIKDVVLNALDRIEKASKNK GTVTGIPTGFIDLDYKLSGLQPSDLVLVAARPSMGKTAFVLNIAQYIAFKKDKGVAIFSL EMSKEQLVNRLFSLESQVDAQALRTGNMKDSDWEKLIEGAGIIGQSNLIIDDTPGISVSE LRSKCRKYKLEHGLDIVIIDYLQLMTGSVGKSSESRQQEISEISRSLKALARELSVPVIA LSQLSRAVESRPDKRPMLSDLRESGAIEQDADVVMFIYRDEYYNKDSEYKKQAEIIIAKQ RNGPVGTVHLAWLGEYTKFANLSRQE >gi|224461043|gb|GG657761.1| GENE 71 75861 - 76217 357 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571333|ref|ZP_03780329.1| ## NR: gi|225571333|ref|ZP_03780329.1| hypothetical protein CLOHYLEM_07431 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07431 [Clostridium hylemonae DSM 15053] # 1 118 1 118 118 193 100.0 4e-48 MGNALEQLRRETKDDAKLYGCIKELYEQGVPFSDLKALIPDIRRTREQLYMKRMLENNNE VLMSMFSKEMSFLLDAKERQEDEQFKKLDQLIRQQQSYRKAAAGTGPVEKLKKLFLPA >gi|224461043|gb|GG657761.1| GENE 72 76428 - 78107 1657 559 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571334|ref|ZP_03780330.1| ## NR: gi|225571334|ref|ZP_03780330.1| hypothetical protein CLOHYLEM_07432 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07432 [Clostridium hylemonae DSM 15053] # 1 559 1 559 559 1022 100.0 0 MYCRKCGAENEAGSRFCCKCGEPVTESSAESGGKSNGGKKKKVLWVCLAICILAAAAAAA LFTAAKQNKEKQFGDNVAKADKYMEELDYDNAKDSYLKAISIDGKQEEPYIQLARIYEKT NEPEKAREILKQGVKNTGSAVIKNKYSLYTYVDEVLIPELGQCSPGTYMTEYRKVSTYGA RVESIHSEAGVVTYRIMDFDSDGEAELLVVILDNKAVNEWDGSQENKISLQMYENENGTI VKSDEWSPQVNVFGTLDFEEDMLFLKEKDDEIYICGSFSGLAYVLADGWGFESFVLTYDG GFQKYTGTDGETGGSSFEDSESDAYAMAERLEHIGLTKSAAEIRDSWMMKLSMDDEMDDI LFTITGRRQNEGHFVYSNNFTAEELGKIDLEFTIWQQGEYQKAKGQDTAAGETEDVDYRA AYEPVVSQALEDYGTYNTYALWDIDRDGVQELLVLCGHAEADYTYKVYTAKGGAAVYIGE FTGSHTALYGPEEEGEPYIMAVQCHMDTEVIARVMVADSSVVYEQISSREVPGGLDYYTN PFPIPFCDVSDMTLVDEAG >gi|224461043|gb|GG657761.1| GENE 73 78145 - 80451 2197 768 aa, chain + ## HITS:1 COG:sll0778_2 KEGG:ns NR:ns ## COG: sll0778_2 COG1131 # Protein_GI_number: 16331925 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Synechocystis # 228 447 10 225 225 207 45.0 5e-53 METRTLTIIDTGSQLTEVKLESFGKENVTLGRSREQCDIVIPDNIVSKLHGTFFLDGERT WYEDNGSMNGTFIGDGQQRRLLTGGSGYAELYDKTVLRIGDVHAPDKMILLLYRVIPEGE VWKKAPLKGEGISIGRGSGCQIRLKHPGVSKVHCFVLPQDGGYVLKDNHSTNGVMINGRS AAGAVLLRDKDLIQILDYQLFFSGECIYYKATAQGISLRACSINKYVGRGKKKKQILKNV RCEIQGNEFVAIIGGSGAGKTTLMNAVSGFEPEFDGKVYCNGIDLIEQFQNLKSIIGFVP QQDIIYENLTLRRMLYYTAKMKMPEDTQGQEIKERIDEVLSMVGLKEHEGTYIRKLSGGQ KKRASIAVELLADPKLFFLDEPTSGLDPGTEKNLMMTLSTLSKEQNKTIIMVTHTTQNLH LCDKVIFMGPGGRLCFCGSVNAAKAFYETDDLVNIYNMIAENPWLWERRYAAYRKDKETK EEPSARSELMKQRSVSAFRQFSILTMRYAELMKNDRPRLGVLLLQPLLIAVLLNVVADKN IFKIYESTKSMLFALSCSGIWIGLFNSIQEICKERVILKREYMANLKLPGYVMSKFVLQA ALGFVQALILTVVFLQLVGKDREGIFLSGFGPEIVFTVWLTILASVTMGFVISSMVETGD KAMAVAPFVLIIQLLFSGILFTLKGAGEIISYCTVSRWSVEGLGSIAKLNRLDLKLQKDY PMLEHAAESFFKATKGHVLTAWGILAFMTVLFMGISIVMLKRISKDRR >gi|224461043|gb|GG657761.1| GENE 74 80464 - 80949 571 161 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1112 NR:ns ## KEGG: EUBREC_1112 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 60 156 462 561 562 67 36.0 2e-10 MDYLDGWKEAGEVFIPPLKKKGFGEDIIIRKRIEPAGERPVPVREEQCAYTGSEPTVFAA HVPRAYIKRLKDGRTTELAGRETVIGKERDSDCVITDNPTVSRHHARITASADGYYLEDL GSSNHTYIDGSEIKKPVRLAGGMCFQLSDEEFQFMLEAGQE >gi|224461043|gb|GG657761.1| GENE 75 80951 - 82957 2244 668 aa, chain + ## HITS:1 COG:CAC0404_1 KEGG:ns NR:ns ## COG: CAC0404_1 COG0515 # Protein_GI_number: 15893695 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Clostridium acetobutylicum # 3 278 21 293 306 143 34.0 1e-33 MSVAEQFSDTYIIREKLGEGSGGIVYRAYHKRLKKEVVIKQMRTRSVSVLVNRQEVDILK NLHHSYLPQVLDFLTVDGEVYTVMSYIPGKSLQQLLKDGYHFTQNELIKWGMQLCSALNY LHSQKPPIIHSDIKPANIMLTPEGNICLIDFNISFFMDENTVLGYTDGYTSPEQYIIALD SESVHSLPQYSSIDEKTDIYSVGATFYHLASGKKTESYRDPIDRELLAEKMGEAFAKVIE KAMQIDPEDRFDSAFDMFQAFKQITKQDARYEALLRRQRGIRAGLVLLTAGFIVLGGFGI HTIKAEKTKAYNELVSRQKKQRQDGEYEKEEDTYKKAVKILPGALESYYQNAYALYEQQK YKECIEFIDYDILENEKVDTLKKRMADIYYLKAESHFQLGEYEKSVNAYEQLFKLGGYDS GYYRDYAVALAYNGSVNKAKEVLDEAAEYGLKEDSLYYAKGEISKSLNELAGAANDFQQC ISLSDDMALKSRAYVMLSEIYKMQGQDVRQRDILAEARAAVPAKYRMLILERLAQADIEL AEAGQSGYRAEATDVLNEVVSLGWETYDTYDNLVILHEKQGEIGEAERLLETMIQLYGED YNIYKRYAFLQVDRQELKDNNARDYKAFAGYFEKARQLYYAQLKGNDTDAEMQLLENVYA QVKAGGWL >gi|224461043|gb|GG657761.1| GENE 76 82957 - 83094 257 45 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571338|ref|ZP_03780334.1| ## NR: gi|225571338|ref|ZP_03780334.1| hypothetical protein CLOHYLEM_07436 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07436 [Clostridium hylemonae DSM 15053] # 1 45 1 45 45 72 100.0 7e-12 MGITAGWIITAVSVLGIAGCTAALAASRKIFDRQRKKLLDEIEAE >gi|224461043|gb|GG657761.1| GENE 77 83109 - 84092 1113 327 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571339|ref|ZP_03780335.1| ## NR: gi|225571339|ref|ZP_03780335.1| hypothetical protein CLOHYLEM_07437 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07437 [Clostridium hylemonae DSM 15053] # 1 327 1 327 327 620 100.0 1e-176 MKEKLKYAVGALLACSLVAGFMPLIEVGAMKMSVMDILKIGVGTYGDTELIREVMELFKE YLRPSIITVVILIILILAGAFLTVVLDASKAYIAALVSGAVNNVLVIILCVSVKGKIDEV ESAFNFFGLSSGIRFHVSTIVLWILLYAVIFGLSACGIVLGKSGQKTEGARDIMPENLSD RKNPWEADLDPKKQAYLERIGQLEQERKAARKATERAAGQTEGSTFHGAIGGRNGRYASK VYPLQEKVQVFFIKDGTGEVLITGEKSGNTTAGVYYISEYEEYCVEPYEKNSFFLTSGQP LGRDRRYHLPRGTEVYIGDRGHAFVLA >gi|224461043|gb|GG657761.1| GENE 78 84115 - 85896 1525 593 aa, chain + ## HITS:1 COG:no KEGG:Csac_0776 NR:ns ## KEGG: Csac_0776 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticus # Pathway: not_defined # 329 455 64 207 409 66 27.0 4e-09 MYCRKCGSPNDEGARFCGKCGAELQPPQEQTEKEKKVKKIRLWAGAAAVLAAAVVLAGYF AMKDVSAREAYEEYMTNADKYLETMDYEKAEEEYLQAIAIDPKQEEPYLKLAQLYEADGE PEKAESILAEADKKVPQKNRRKLAKKKEEDKQAAEQKSNYTAVWETEPQVEADAIYYLAE NDYYEQPVNELRKQYLSPYAVIQKGEAKGLIGMDGRTEGGLDYEDIQIEAGGYLMERTEP VYDDKAQGQCSMYRMLEGMDEIEPALGLGGMPPYDVFYESGGELISLLERSGGSFCDFHK EVPEGAFPVQHFETPFEGDIFDDSYREWKENGGLYAVYNGGAPVTDFVYEECGSAVDGLL AVKRDGKWGYVDESGKEVIPAEFDASWQYYTSADPYGEAYEDYCYAASEGYVVLRSGKQW ELRDTAGNVAVPSGIYEEILPVYEGRCWVKKDGRWGVLEIYEWSEDAQQEDGGGSGEDVQ DTGGPGESYTVYDSGPVELTGVIQFETGTHPNGQEIGAVILKLDTPAGFHVGGGLEPEES FENCTDIQLVGAEIDKSWEGKHVKVTGELNADAYTVYYFREYAVYDAVVSEIK >gi|224461043|gb|GG657761.1| GENE 79 85912 - 86172 425 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571341|ref|ZP_03780337.1| ## NR: gi|225571341|ref|ZP_03780337.1| hypothetical protein CLOHYLEM_07439 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07439 [Clostridium hylemonae DSM 15053] # 1 86 1 86 86 160 100.0 2e-38 MSDNDKTVFVNYEKGSQEPGLEQAYMELGKAYYEGKFEDPLPELLPLFDKITRLKKENEK DENVCPHCKSELKPGSLFCAQCGQRI >gi|224461043|gb|GG657761.1| GENE 80 86175 - 86948 587 257 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571342|ref|ZP_03780338.1| ## NR: gi|225571342|ref|ZP_03780338.1| hypothetical protein CLOHYLEM_07440 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07440 [Clostridium hylemonae DSM 15053] # 1 257 1 257 257 527 100.0 1e-148 MRYCDNCGHKLREDDVFCQQCGHKAGEPLGNRIASGKTGPPGTRRSNVTAVIICAVVFLC VCGLILWYIFKPESSGSGERTAASHVEGAVLSDTVAAAELTAEPDSLSPYHKVPAVSSGA SSVVRQEGHDNTAAMTLDGLDETSWQEGAAGPGIGQQIWYELDGTYEIKYLSFKLGNWRG SSYYAGNHRPRVLRITAGGVTGDVTFPDGMEEYWVTLSNSCKADRIVLEIRDVYEGNKWD ETCIAEVGIYGKQEEPK >gi|224461043|gb|GG657761.1| GENE 81 87001 - 87615 726 204 aa, chain + ## HITS:1 COG:alr3997 KEGG:ns NR:ns ## COG: alr3997 COG0515 # Protein_GI_number: 17231489 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Nostoc sp. PCC 7120 # 80 187 382 483 496 65 33.0 8e-11 MRCQKCGTPVGKDDLFCPECGSRIEQKSNTKVVVIAAVIMAAILAGIIFWVMSGSSGDAG RSETKSEDTKNKNDSSKKKQEKSKESTKPETVKQPEEKNTNAAGYILPESDSVYLTDADI DGLTLRDLNYAKNEIYARHGRRFKSRELQDYFNSQSWYTGQYDADDFDANYSQSVLNDYE KKNAELLRKKEFSLNSGGYPLDAQ >gi|224461043|gb|GG657761.1| GENE 82 87632 - 88465 888 277 aa, chain + ## HITS:1 COG:BS_yqiI KEGG:ns NR:ns ## COG: BS_yqiI COG0860 # Protein_GI_number: 16079475 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus subtilis # 66 276 28 206 206 77 29.0 4e-14 MKKKRIYVTMTLILLVAVGVAAAVYILKSPFEAKKSPVSKSAGKDVPGKMTKADKEKLVP ETIKKKGITVAVDPGHQGPHVDMSAQEENAPGSGVMKQKATSGTTGRYTGLGEYELNLDV SLKVKERLEKLGYDVVMAREDNDTAISNKERAQMANEAGADVCVRIHANGSESPASEGAL CLVMSQDNPYVGRLYGESSRLAEAVLSSYCEATGFSNMGIQANDTMTGLNWSEIPVMILE MGFMTNEHDDTMMADDAFQEKMADGIVNGLEKYFEQR >gi|224461043|gb|GG657761.1| GENE 83 88483 - 89391 906 302 aa, chain + ## HITS:1 COG:FN1584 KEGG:ns NR:ns ## COG: FN1584 COG2367 # Protein_GI_number: 19704905 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Fusobacterium nucleatum # 65 297 6 259 264 90 28.0 4e-18 MLNVKIKKGALTALLCVILCITGCGGKSGDVKENGGSRTEKKNLVITTEDKGRTEQNGAA APVQEFQAQAEKLAADFPGGGECAVYVYGLVSGREASVNNKPMQSASLIKLFIAAAVLEQ KEKAEAQGSGSETDALLKAMITVSDNEAANTLVKRLGAGDAAAGMNAVNTFAAAHGFADT HMGRLMLDFDAQDDNYTSVKDCGIFLQRLYRQELAGAEQLTGLMKEQTRTGKIPAGVPAG TVTANKTGELDTVENDAALIWGEEEPYILCVMSEGLADAAAARDGIQKLSSALYELMRSE AP >gi|224461043|gb|GG657761.1| GENE 84 89418 - 90365 911 315 aa, chain - ## HITS:1 COG:YPO1288 KEGG:ns NR:ns ## COG: YPO1288 COG0111 # Protein_GI_number: 16121571 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 307 6 313 321 223 36.0 4e-58 MKVVITDYEYENIETERAIIEGAGFTLHSCQLKRPEELLPVLRDADAVITQYSSITSEVI EGMEHCRMIIKYGIGVNNIDCDAAAAKGILVCNVPDYGISEVSDHTCAMILALGRKLMPL AGALKSGDWGYSSAVPLKRLSECTLGLVGFGRIPQMAAKKMRAFGMTVSAYDPFVSSETA AEQSVNLVSLDELLRTGDFISVHCPLTSDTFHLIGKEEIEKMKASAFLINTARGGIIDEK ALITALKEKRIAGAGIDVFEEEPVHPGHPLLSMDNVIATPHSAWYSETAIRTLQRKAAEE VVNVLKGNKPFNRVV >gi|224461043|gb|GG657761.1| GENE 85 90378 - 91385 874 335 aa, chain - ## HITS:1 COG:RSc2759 KEGG:ns NR:ns ## COG: RSc2759 COG3734 # Protein_GI_number: 17547478 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Ralstonia solanacearum # 6 335 4 331 331 257 44.0 2e-68 MSAYTITIDGGTTNTRCILWDDRRIKTGEAKREVGVRNTAIDGNNSRLKHAVKECLEQLL KDASISYDDISHIIASGMITSDVGIVEVPHLTAPAGLTEIAAATEAITLPEICPLPIHFI PGIKNSDGQITFDNYEAMDIMRGEETESLAIIHTCHRGTPLLLVLPGSHNKFVSVDKDGR ITGCLTSISGELLDSITNDTILAKSVGRSFVTAEDYDRDWLLLGYSSAKKAGLGRACFSG RILSLFKEKNPSKIANYILGAVLQGDITAVKNSQAVRLTNDTQVVICGKAPLNLALKDIF QAEDLFSHVTVFEPDNGFSASALGAYLVAEKMRLL >gi|224461043|gb|GG657761.1| GENE 86 91457 - 92320 965 287 aa, chain - ## HITS:1 COG:TM0326 KEGG:ns NR:ns ## COG: TM0326 COG1737 # Protein_GI_number: 15643094 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 11 264 4 258 280 145 32.0 6e-35 MHIDTDHYPTLAKISELYPQLTKGQKQLADYILKNPSEVVNKSITDLISHTSLKSEASVV KFYRLLGFDGFKSFKIKLAQELVNRTFYHSESDITIDDEPTEIKKKVFLGAMSSLSKNAD IAAGECMDAQKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTH PRPGDVILCVSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERN ILTDALNSRVSQFCLIDALFSMISIANANEMLPRLQDTRNTFKKYKL >gi|224461043|gb|GG657761.1| GENE 87 92571 - 93719 1561 382 aa, chain + ## HITS:1 COG:L82310 KEGG:ns NR:ns ## COG: L82310 COG1879 # Protein_GI_number: 15673617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Lactococcus lactis # 8 354 4 320 324 103 25.0 4e-22 MKKWKVQMKKAASLLLVSVMVLSLAACGSKGSDGKSDKKDKKADKKTEQEGQDFTKDVLK DLAVKEDGTPVKAAITVAELDSEYIIAVQKYMQYILEEAGADVTVSSADGDAENQCNQIY DFIEKGVEVVLIQAADSNAVAPAIKACNDAGVKVIAVNRTIYGDCKVDYSVLIDDKAMGE MCAKYIADNSKEKDVKVTTMQGTLGTATADDRAEGFSAGVQSDGLDNIRDNPCEWSSEKA MAAMNDVLTTDSDVGAVFLHSDCMLAGVVSALTQSDKLKNVGEDGHVMIVSIDGAASALD YIRQDVLDMTVDNSPLAMATIAAKAVLTKVVKGEDLGGKVITVDATVITKDNVDDAAFWG NFNVDDGYWSETASVWDQYTIE >gi|224461043|gb|GG657761.1| GENE 88 93791 - 95284 172 497 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 270 478 38 240 329 70 25 7e-11 MEKQGLIMKSIGKQFNGVTVLEDVDFDVRPGEIHGLLGENGAGKSTLMKIVNGVLTPSAG EIYIDGGKVSFDSPHAASRAGIRMVYQELDLFAHLTAAENICQGNLPRNGMRLIDWPRMR EISREILRMIDVEIDVDERLDRLSIAQQQIVAIARALNGNCRIILLDEPTSALPKKDVEN LFKIVRQLKGKNISVVFISHKLDEMMEITDRITILNNGKKVATVNTEDINEDKLAEMVVG RTIKNKYPKIHCEAGETLLKMEHISLEGRLNDVSFELKKGEVLGIVGLLGAGKTEIAKAL FGVYGKGNKRLTGNIYMGGRDARFAAPAQAVKAGIGYISEDRGSEGLQVEQPIDFNISLA ALRKLSRLGLLNLKKERDTNERLIDKLKIKCETPRQKVSSLSGGNQQKVVIAKWFATEAK IVVLDEPTRGIDIGAKVEVYNLINEMVEAGIGVLLLSSEVPEVFGMADRILVLKDGRITG EMNNGSITEAELQRQVM >gi|224461043|gb|GG657761.1| GENE 89 95307 - 96272 1272 321 aa, chain + ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 16 311 35 329 330 188 40.0 9e-48 MNKKLKLFMKSQGSVFLILVLMCLVASLFTDKFFSPSNLSNVLAQSVTCGISALGMTFVI LTGGIDLSVGGCIVFTATIGMKFLAEGTVGVETAVLMMLGLGILVGMFNGILITVLKMPS FIATLASSSVTAGLALYISMGKTIIGLPIEYSVIGLKKVMGLPICVWLMFALYILSYVIL RYTGYGRKVYATGSNRKSAWLSGINVRLVEFSVYVINGLMSALVGIVLTSKLLSSTSTIG NGMEVNSIAAVVIGGASMTGGEGGVAGTIVGALILTIISNAMNLMSVNAYLQEVVMGLII IIALLFDMLRKGYIFRKPDEE >gi|224461043|gb|GG657761.1| GENE 90 96291 - 96974 719 227 aa, chain + ## HITS:1 COG:TM0008 KEGG:ns NR:ns ## COG: TM0008 COG1878 # Protein_GI_number: 15642783 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Thermotoga maritima # 1 227 1 223 224 153 37.0 2e-37 MLIELSYVISEHVPKWPTNPEEKYDYNQAFRFGDTCNASSVYHHLHTGTHVDAPFHFDKT GRTIDEIPAEDFYYTAPLVLKLMKSEGERVELAELKVHEEEIAKCDILFLYTGYSDLRES SPEKFVSDFPSMAPDAARYLRKNFPGLKAVALDSISFDSAVTGAAEGFPSHHALLETNEE QTERTLLLYEDVNIKKLAEQDTVRAVCAFPVRFAGLEAGPVNMVAIV >gi|224461043|gb|GG657761.1| GENE 91 96993 - 97880 1145 295 aa, chain + ## HITS:1 COG:CC1195 KEGG:ns NR:ns ## COG: CC1195 COG0329 # Protein_GI_number: 16125446 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Caulobacter vibrioides # 4 291 6 290 294 118 29.0 1e-26 MKKLKGVVPPMITPFDAEGRLDEYNLQKLVEYLSPKVDGLFICGSYGCGPLMTLEERKKV AEIVRKYSAEETMIVVHTGALTTKDTTELTLHAAEIGCDTAAAVGPYYFHYGDEELIRYY TDVIDAAGERIPFYAYHNPKFQGYETSLNVMKQLKNAGLSGIKDATFDLMNYAIYERELV DDNFDLALGTEALWISAHALGCRAYIPGIGNVFPELCGAMFEASMKEEKEKARELQFLIN KLRDIMYLAGSTQLAIYAIAEIRGIMTAYPRRPFLPPTAGEKDAIKEALKELEVI >gi|224461043|gb|GG657761.1| GENE 92 97880 - 98914 1156 344 aa, chain + ## HITS:1 COG:RSc2759 KEGG:ns NR:ns ## COG: RSc2759 COG3734 # Protein_GI_number: 17547478 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Ralstonia solanacearum # 1 340 1 331 331 168 31.0 1e-41 MYNIIIDCGTTNSRAYVVREDGSIAGQASKKIGVRDTSITGSKEALAAGLKETVGKAVEA AGVREADICAVLSSGMITSEIGLCELPHLTAPCGVNELAGHMERVEGLDLYGGKPVYFVR GIKNKMEEAPEDPFKAAGCLDFMRGEETQAVGIMESAGMILPAAIVILSSHTKFISVEED GRILGSLTTMSGQTYEAVKNNTFLGKSLDGDESSVPEDYFDADIVENAAAWVQRAGLVRS FMFPRFLDVLLDTKWYERRLFFEALIAADDMLSLGQMDMFGGSGTQRFVLVGLKERCRLY EYILRKKYVGAEITVISDKEQIDRLSIDGMLSIAKKAGIIACGK >gi|224461043|gb|GG657761.1| GENE 93 98902 - 99873 1244 323 aa, chain + ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 1 311 1 302 524 180 38.0 3e-45 MWKIVIADYYYPDLKEEYKVFEQLGETEIVDLTKIAEGGIKEPGELIPYVKDADALIVQF AKVNKEVIDSMERCRVIARYAIGVDTIDVEAAAAKGICVANVPDYCIDEVADTAIAHIMN AKRKIARANSLLLAGEFDMAKIRPVGRMENEVLCLIGFGNIARNVAGKMKSFFKEIVVYD PYVKDCGSYPEYRFLDFDEAVSCADVISLHVPLNGTTEHMMSDRAFGLMKQGAAVVNTAR GGLIDEAALVRALDMGKVGYCGLDVVSTEEFGSSPLLHREDVFITPHMGWCSEEAIVELQ RKTAENVAETLLFGKPKYCVNKV >gi|224461043|gb|GG657761.1| GENE 94 99894 - 100553 706 219 aa, chain + ## HITS:1 COG:TM0066 KEGG:ns NR:ns ## COG: TM0066 COG0800 # Protein_GI_number: 15642841 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Thermotoga maritima # 1 200 1 201 205 116 30.0 3e-26 MDMYSIISDNPVLAIFRNVPLEHTVDYAETVVRGGISFFEIALNSRDGIEQIRLLRKHFG DSCMIGAGTAITVDSAKAALDAGAQFLLTPGTPLNVLEFCAAGGIMLLPGVLTPSDVAVS LQYGFRTMKLFPAKSVPRGYVKALKGPYDDTNYIAIGGVSPANIGEFFEEGYAGVGMAGG LMPEEIVRNERWEAGAEYIRKLLADSRLPSREVRCHENN >gi|224461043|gb|GG657761.1| GENE 95 100540 - 101688 1169 382 aa, chain + ## HITS:1 COG:SMb20510 KEGG:ns NR:ns ## COG: SMb20510 COG4948 # Protein_GI_number: 16264240 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Sinorhizobium meliloti # 1 382 1 382 382 520 63.0 1e-147 MKITEVNTYAVRPRWGFVEIVTDDGFTGWGEPVLEGHTKAVLASVQEMADELYGRDPLHI EDIWTTLYRAGFYRGGGVLMSAIAGIDQALWDIKGKYYGAPVYELLGGACRSRMKVYRWI GGDRPSDVKDAALRKKEEGFRAVKMNATEELQMIDSYEKIDAVLERTAAVREACGKYFGI AIDFHGRVHRPMAKILAKKLEEFDPMFIEEPVLCEHMEAFSEIAACCNIPIAAGERLYTK YDFRRLLSAGGVSIVQPDLSHAGGITEVRKIAAMAEAYDVALAPHCPLGPVALASCFQVD ACSYNAVIQEQSMGIHYNVGRSVLDYVYNKEDFCFEDGFASLPRLPGIGAEINRDLVVSE NETPHTWKNPVWRHEDGSVAEW >gi|224461043|gb|GG657761.1| GENE 96 101792 - 101962 189 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|153854059|ref|ZP_01995392.1| ## NR: gi|153854059|ref|ZP_01995392.1| hypothetical protein DORLON_01383 [Dorea longicatena DSM 13814] hypothetical protein DORLON_01383 [Dorea longicatena DSM 13814] # 1 56 1 56 56 65 92.0 2e-09 MAHVISDECVSCGACEAECPVGAIAQGADHYEIDADACVDCGACAAQCPTGAISQG >gi|224461043|gb|GG657761.1| GENE 97 102095 - 102847 487 250 aa, chain - ## HITS:1 COG:SPy0379 KEGG:ns NR:ns ## COG: SPy0379 COG1180 # Protein_GI_number: 15674526 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 3 238 11 248 263 254 48.0 9e-68 MKGFIHSIESCGTVDGPGIRYVIFFQGCPMRCQYCHNPDTWEPGTGGTMSVEEVLQGFYS NLPFYRSGGVTVTGGEPLMQMDFLTELFRDLKRHGVHTCIDTSGIMFNPHNETFMSRLDE VLSLTDLVLLDIKHMDDERHKALTGHSNQRILDFARYLDKKQVPVWLRHVIVPGITFYRE YLQRLGRFMATLSNVKALDVLPYHSMGRSKYESMGYDYPLKDTKEPSKEDAEAARNVILS AYKKAKKAPG >gi|224461043|gb|GG657761.1| GENE 98 102947 - 103189 347 80 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 4 80 667 743 743 120 71.0 7e-28 MTVNKQQIDNLVAMLDGYVEQGGHHLNVNVFSKETLLDAQKHPENYPQLTVRVSGYAVNF IKLTKEQQDDVIARTFHNNM >gi|224461043|gb|GG657761.1| GENE 99 103210 - 105324 2304 704 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 8 673 3 668 743 1036 74.0 0 MEHKWHAESWDGFRPGRWNRTSVNVRDFIQLNYTPYEGDDSFLAGPTGATGKLWDQVMEL SKQEREAGGVLDMDTSIVSGITSHGPGYLDKDKEQIVGFQTDKPFKRSLQPYGGIRMAEN ACKENGYEVDPEVVKIFTEYRKTHNQGVFDAYTPEMRLARKSAIITGLPDAYGRGRIIGD YRRVALYGTDWLIEDKKQQLSTSLVRMTGDNIRLREELSEQIRALGELRKLGEIYGFDIS KPARNAKEAVQWLYFGYLAAVKEQNGAAMSLGRTSTFLDIYIQRDLDRGLITEEQAQEYI DHFIMKLRLVKFARTPEYNSLFSGDPTWVTESIGGMGIDGRTLVTQTSFRYLHTLDNLGT SPEPNLTVLWSTKLPKNFKEYCAKMSIKSSSIQYENDDLMRVTHGDDYAIACCVSSMRVG KEMQFFGARANLAKCLLYAINGGVDERMKIQVGPRFRPAEGEYLDYDDIMSKFDDMMEWL AGLYVNTLNIIHYMHDKYSYEKLQMALHDREVKRYFATGIAGLSVVADSLSAIKYAKVKP IRDEDGLVVDYEVEGDFPKYGNNDDRADDIAVEVVRSFMDKIRKHHTYRHSVPTMSILTI TSNVVYGKKTGNTPDGRKMGEPLAPGANPMHQRDTHGALASLASVAKIPFRHAQDGISNT FSIIPGALGKEDQIFAGDLDLDRIEDCKDLACNIPNIEDSIDNE >gi|224461043|gb|GG657761.1| GENE 100 105551 - 106756 1308 401 aa, chain + ## HITS:1 COG:SMc02774 KEGG:ns NR:ns ## COG: SMc02774 COG1879 # Protein_GI_number: 15963773 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 77 400 37 324 329 100 29.0 4e-21 MGVGFMKKLWSAVAAALCVTLLSSACAAGNVSDAKAENTEDKKVKSTEKEYQRSLDIIQP RAYSNVNGLKLEPGSYLSIIGKSSDGQYWEAVEKGVLQAVKDLNKELGYKGKDKIKVTYS GPATAYDVDDQVNILDEELDRYPAALGISMVDAKACDVQFDLAAEGDIPVVAFDSGSDYQ GLMATVETDNDKSARAAADKLAEAVNEAGEVIIFANDSKSKSSQEREQSFTAQIAEQHPG VTVVDAYHRDQLPELQKRVADEINAGTYQKDGGDKPEEEVTADSITEEEAVNYLFAKHPN VKGCYATSGEAVNAVVESMDRLELKDVALVGYDADDAEIEALSEGRITGLIVQNPFGMGY ATVVAAVRAAMKAGNEAIVNTGYTWVTKENYKDKDIKKLLY >gi|224461043|gb|GG657761.1| GENE 101 106832 - 108256 1106 474 aa, chain + ## HITS:1 COG:no KEGG:Clocel_1077 NR:ns ## KEGG: Clocel_1077 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulovorans # Pathway: not_defined # 9 470 132 568 571 387 42.0 1e-106 MRQLNADNYRTDKNGWNFVHVEGSAFERGVSYGRLMAGEITASVQEAARLAELQTGISWE YFRESERSILPRWKAHMEREPYREFLDELEGMVRGVQMEVRDCTLSVDDLILWNGYEELT GYWFPSAADDIYRSLPGQHGAAGTDRHFKGADDHCSAFIATGSYTADGRIVMGHNSFTPF ENCNYMNVIADIVPEHGSPFIMQTLPGYIHSLADVYETRTGRGAGLMITETTIGGFNVYD CDGAPEFVRIRYAVQYAESLDEFVRLFLENNNGGYANTWLVGDIATNEIMRFEAGLKFYQ IDRTEDGYYAGFNAPLDARIRNLECVDSGFADIRRHQGARQVRIPQLMEKYKGRLNNVTA QKILADHYDVYLEKENPCSRTVCSHYELDKREYMCQPGRPAPYEPRGAVDGVTASADDAL ELSLWARWGSSCGMPFHAEEFLRDHPQFAHLKEFLKDRPSRPWTRFGAKESRHD >gi|224461043|gb|GG657761.1| GENE 102 108319 - 109734 1497 471 aa, chain - ## HITS:1 COG:CAC3219 KEGG:ns NR:ns ## COG: CAC3219 COG0642 # Protein_GI_number: 15896466 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 465 1 471 475 213 30.0 5e-55 MRSTLYLKFIIVYIIFGFLGFFTIATLTSGLTEGRLETYMSGTMYKEANLVASDYLPDYF SKRLTASDVHLQLKGMESHLNASVWFVDRDGNVLVSAQSDNYPMAPGQIEDFDPAEGGSS QYQVGEYHDCFDEDVITVIAPVVYNYTPNGYLIIHKRMSDIMEIRDLLLNSVYISMVVIY ALSFIILLAFQFFVYRPLRKITEAATQYASGNLDYEIPLNTEDEMGYLGASLNYMSSQLK DMEDYQKKFVANVSHDFRSPLTSIKGYVEAMTDGTIPAELQEKYLKIILFETERLTDLTQ DLLTLNEFDTQNLLLNKEPFDIHEIIKNVAASFEGTCTQKKVSIELIFATKHLFVNADKR KIQQVLYNLLDNAIKFSDSESAVTIETTERGDKVFTSVKDYGIGIPRNALNKIWERFYKT DLSRGKDKKGTGLGLAIVKEAIQAHGENVNVVSTEGVGTEFSFSLPKYRPE >gi|224461043|gb|GG657761.1| GENE 103 109746 - 110450 928 234 aa, chain - ## HITS:1 COG:CAC3220 KEGG:ns NR:ns ## COG: CAC3220 COG0745 # Protein_GI_number: 15896467 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 6 234 7 228 228 251 54.0 7e-67 MVNKQKILIVDDDENIAELISLYLTKECFDTMMVHDGEKALIAYDTYQPNLILLDLMLPG IDGYQVCREIRAKSNVPIIMLSAKGEVFDKVLGLELGADDYMMKPFDSKELVARVKAVLR RYQAVPKAEEPAEDKGKCVEYPGIVINLTNYSVVVDGANVDMPPKELELLYFLASSPNQV FTREQLLDQIWGYEYIGDTRTVDVHIKRLREKIKDHSTWGLSTVWGIGYKFEVK >gi|224461043|gb|GG657761.1| GENE 104 110469 - 112844 2170 791 aa, chain - ## HITS:1 COG:CAC2340 KEGG:ns NR:ns ## COG: CAC2340 COG1193 # Protein_GI_number: 15895607 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 1 791 1 788 788 608 45.0 1e-173 MNQKTLIKLEYNKIIEMLTANASSPAGKERCRKLKPMTAPEEIQITQEQTAAAFTRIVKK GRLSFSGNSSVEDSMKRLEIGAVVGSGELLRICKLLECANRAKAYGRRENSDESSDCLDA FFEQLGPLTVLSGEIRRCIIEEDEISDDASSALKSIRRQMGQINDKVHDTLNSMVNGSLR TYLQDPIITMRGDRYCIPVKAEHRGHVQGLIHDQSSTGSTLFIEPMAVVKLNNDLKELYA KEQEEIQVILARLSAETAEHIQTIRTNCTVLTELDFIFAKGSLALDMNASMPLFNTEGRI HIREGRHPLLDKHTVVPITITLGDTFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIP ALDRSELSVFHDVYADIGDEQSIEQSLSTFSSHMTNIVSFLKQVDEHSLILFDELGAGTD PTEGAALAISILNHLHERGIRTMATTHYSELKVYALTTPGVENACCEFDLETLRPTYHLL IGIPGKSNAFAIAGKLGLPSYIIEEAKRHLSEQDESFEDLLADLEANRRTIEKEQAEIAS YRRELERLKDEASQKQKKLDEQKERILREANEKAHAILAEAKDVADETMRNFHKFGKENI SAADMERERERLRKKMASTASGMDRQVKKPQKQHKPGDFKLGESVKVLSMNLTGTVNSLP DAKGNVTVQMGILRSQVNISDLEIIEEAPSYSAKQLHKTSKGKMKMGKSFSVSAEINLLG KTVDEAVAELDKYLDDASLAHLSSVRVVHGKGTGALRTGIHNYLKRQKRVKSYRLGAFGE GDAGVTIVELK >gi|224461043|gb|GG657761.1| GENE 105 112957 - 114237 1494 426 aa, chain + ## HITS:1 COG:alr2758 KEGG:ns NR:ns ## COG: alr2758 COG0265 # Protein_GI_number: 17230250 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Nostoc sp. PCC 7120 # 151 407 128 389 407 89 29.0 1e-17 MSMEEQKDPLEHTEEQEEEEAFSFLQETIKDEAGGTKKTRKSILRMIGLGLVFGIAASFS FSMLKPWFEQNFQSDPEKVTIPKEEEEENTADDDGTKNNTQQVLDEESYRQMIQALNAVA QEASKSVVEINGISGDSDWLEADYDKKNSVSGLIIADNGQQLLILGKTSILKESNEVTIT FYDGKTYKAGVKKKDSNLGIGIYAVRRADIQESTWSQSKIAVLGSSNSLAKGETAIALGK PFNYAGGTGYGIISSNKNVIDVADGQYRLICTDIPGTGKGTGFTVNLKGEVTGIIDQSIS DEDSMKLTTAYGISDLKELIELMSNGKAVPYIGILGIDVTESIEQQGIPQGVYVKEVEVD SPAMAAGIQSGDIITSIGGAEVKTVSAYQSVLIDKEVGSKVKIRGQRQGSGGYVDIDFNV TVGSKE >gi|224461043|gb|GG657761.1| GENE 106 114254 - 115195 901 313 aa, chain + ## HITS:1 COG:SA1660 KEGG:ns NR:ns ## COG: SA1660 COG3481 # Protein_GI_number: 15927416 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Staphylococcus aureus N315 # 1 290 1 287 313 169 34.0 9e-42 MRYINTLQEGETIRNIYLCKGKRSAETRNGKPYDNLLLQDKTGTLDGKVWDPNSGGIADY DEMDFIECYGEVTSYNNNLQLNIKQIRKAQAGEYVPADYMPTTEKSPESMYEGLLGYVSQ IGNTYLRQAVEYYFVNDEEFISRFKAHSAAKSVHHGFAGGLLEHTLSVVKFCEYMVGAYP ILNKDLLYAAAICHDIGKTVELSAFPENDYTDDGQLLGHIVIGVEMVSDAVRTIPDFPVK LASELKHCIVAHHGELEYGSPKKPALAEALALNFADCTDAKMQTLTEIFKDKNSNDWLGY NRLFESNLRKTSV >gi|224461043|gb|GG657761.1| GENE 107 115298 - 116713 1344 471 aa, chain + ## HITS:1 COG:BH0687 KEGG:ns NR:ns ## COG: BH0687 COG2265 # Protein_GI_number: 15613250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 1 452 8 454 458 467 52.0 1e-131 MKKNDMVKVTIEDIGVNGEGIGKVDGYTLFIKDAVIGDVVEAKVTKAKKNYGYARLVNIA DESEFRVTPRCDVARQCGGCQIQAMSYARQLEYKNEKVRNNLIRLGGVPQELLDEVMEPV CGMEEPYRYRNKAQFPVGTDREGNIITGFYAGRTHQIIPHMDCAIGRAENKEILNIIISF MKEFGLSPYDETSHKGLIRHILIRTGYRTGEIMVCIVINGNGIPHGDTLAERLAEIPGMT SVTYSVNREKTNVIMGREAGLLWGQAYITDYIGDIKYQISPLSFYQVNPVQTERLYETAL EYAGLHGDETVWDLYCGIGTISLFLAQKAKHVYGVEIVPQAIEDAKKNAQINGIENARFY VGKAEDVLPEKYENDGIHADIIVVDPPRKGCEESVLHTMVKMQPERIVYVSCDSATLARD VKYLRGSGYEVKRVKGVDMFPHTGHTEVVCLLSKLKSSKHIEVELKMDKLI >gi|224461043|gb|GG657761.1| GENE 108 117270 - 117374 58 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIKYWIWNLELKLNLTEMQNLKQLLANIKTEII >gi|224461043|gb|GG657761.1| GENE 109 117938 - 119326 247 462 aa, chain + ## HITS:1 COG:RSc2619 KEGG:ns NR:ns ## COG: RSc2619 COG4694 # Protein_GI_number: 17547338 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 17 389 352 721 767 66 22.0 1e-10 MDVLNSPNYIKCKDVVEEINKEIFKIREIILKKINHPYTPITGFESYLIDKLEQYELFRT KLQQEIETYNNAVKKIGTLKRNLTTDNAAIAHCEVSRDIELLKQALEDQRNADEALKESD EKIKNLNDELNVLKSRKKNIKIAVNLINKSLRYVFFSKDRLEIKVEEDKYVLYAHGKAVK PNNVSVGERNIIALCYFFTELIMNQEAKDGYSKKLILVIDDPVSSFDFENKVGIMSLLKA KLADIVKTNPESQILVMTHDIQCLYDLQKIGQDVCNEYKKESNGKKKVTYACCELKNKEI ISFNYTKRNEYSEILKTVYDYACSKNENDALIVGNSMRRVMEAFSTFVYKKGIAEISCDD TILQQIGDRDYIDYFKNLMYRLVLNGDSHMLERTNSLDDVDYLYFLSDGERRRTAQEVIC FIYLLNKRHILAHLEGKQNIETNIQKWCADIKSFCVGDEVMA >gi|224461043|gb|GG657761.1| GENE 110 120003 - 120098 58 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRIEEYIPNKIMELCSKIFTVDDNIPNLSEE >gi|224461043|gb|GG657761.1| GENE 111 121563 - 121643 91 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVVFGMGMIADVGLYQRLILNFGSTK >gi|224461043|gb|GG657761.1| GENE 112 121706 - 121786 62 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIIWGCQIKKSNREYLIDILNKFLKE >gi|224461043|gb|GG657761.1| GENE 113 122387 - 124414 153 675 aa, chain + ## HITS:1 COG:no KEGG:CD3148 NR:ns ## KEGG: CD3148 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 15 616 202 811 872 66 21.0 3e-09 MNDLQISYMNEKPIRMCEIFAGAYYTQNDVTYYAGNSYRFEPVLKFVPRISIARELIIED CENNITSLCVCGGMYFRKSITELTDLLERKSLAHVFLLSEITEMAGTDLLGKYPDMKLFA STPQALNCFEVVDIATSNGLNAKLNQSIKALVNNNIDYINCQSPIEKGNYEKLKQNLFVL SRAEDRELGEFVIAAYSLLKIITFSIFPLSHLDKISNKQAFENYGPSTKMNYINEYSKNY KGINENEVKQTREDLSNLFLNTYYENSKFQYIFDSITTYNFEKKLLLVVPKVYFKDAFYY SFKGKNSRYIKNIDVVTPNNLRKKDITNCIVILCGIFGKEESIFLDNLKAYDLKVLLYSF EEPLLAHISRAIENAYTYYNSRNHLFCINLKEARMEFDECNNGIEEELDLFVQKLELSTI TAFASQLKSGTQNGMSEVFKIINFITGETAFLTRYFEVYVLNHDNGQIEEKSVSELVEGD ELVFAKRDEQSKDMIDVLLKRIIFDKQCPEQLRIAYQLSKHWKTVLKTYISDQKITYRQL AERMREFGKGKHEATLRTWLNEDAHIVGPRDEESFYEIALLTEDDKMLESPEIFRDACDE IRSLRIRILKYIGKYVFGKHGRQGKQLDVLLNDIIGDISDTIQIYQVAQILDGKDATGSV MSVPSYFTNRPQLKS >gi|224461043|gb|GG657761.1| GENE 114 125408 - 125500 78 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVMRKKSLFPYFIATKKYMLPGMELLSIGR >gi|224461043|gb|GG657761.1| GENE 115 127693 - 128091 97 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571374|ref|ZP_03780370.1| ## NR: gi|225571374|ref|ZP_03780370.1| hypothetical protein CLOHYLEM_07472 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07472 [Clostridium hylemonae DSM 15053] # 1 132 1087 1218 1218 268 100.0 1e-70 MVSLIRHLYGLGKDKDAANFDISDKYVKEIEGILLKRVADINNRLSYKMEDNSQDILEEM RMFFSEWQERLNIGEKEHFFYGDQFMFKQPTGLDKRLMKVYSSGGDDNAKETLISMRNVD QSIAANIITWEE >gi|224461043|gb|GG657761.1| GENE 116 128933 - 129967 29 344 aa, chain + ## HITS:1 COG:no KEGG:CD3150 NR:ns ## KEGG: CD3150 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 5 338 284 633 637 302 44.0 1e-80 MEDDDDAERKERIRKQIDNWSGKIAIEISANPLTVKNILFRKWEIIQQENYATDSSDYRY EEFQALTGQIPKNDLLTGDFITEDMDVNQYHIPGIERVTLVHKVREVRALTGFTRINPPG ASDLGKDTFGFVSSKEPDTSWFPAYEVRGEGIFLEFDKSQLERWVSGCPEVLVRSKIIED NFKKSFYGGIIAKDLSPQFIFLHTLAHLLIRELSFECGYSAASLRERIYFNSYKTPMAGI LVYTAGGDSEGTLGGLVRQGYHDCLPHIFRKAIANAKICANDPVCITSNGQGRDSLNLGA CHSCVLLPETSCDEYNSFLDRALVIGTFENKMIGFYSNYENDIV >gi|224461043|gb|GG657761.1| GENE 117 130237 - 131364 735 375 aa, chain - ## HITS:1 COG:CAC3375 KEGG:ns NR:ns ## COG: CAC3375 COG1063 # Protein_GI_number: 15896617 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 1 375 1 377 377 502 62.0 1e-142 MKAIVYDGLQKVECRTVEDPRLEKEDDIIVKVTSAAICGSDLHLVHGLVKGMYDGYVLGH ETMGIVEEVGKGVKNLTKGDRVVIPFPVACGHCEFCNKGEFSQCDNSNDYGESGGLFGYS KYHGNYAGGQAEYIRVPYANVGPKKVPDELTDEQVLFVTDVLPTSYWGTEIAGVKAGDTV VVLGCGPIGLMTIKWCIQKGAGRIIAVDNVSYRLKHAKGYGVEALNFEEYEQVGAHIKEI THGGAHCVIDCVGLDGKTSVMEKIETALKLQGGSKSAIEIASQCIRKAGTAAFVGVYGNK YNNFPLGNFFSKNITLKMGQCPATGYVDLMLQKIQKGEFDATDIITHKLSLEEGSHAYSI FDKKEDNCIKVILKP >gi|224461043|gb|GG657761.1| GENE 118 131570 - 132862 1004 430 aa, chain + ## HITS:1 COG:BS_ywpD_2 KEGG:ns NR:ns ## COG: BS_ywpD_2 COG2972 # Protein_GI_number: 16080688 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus subtilis # 220 423 1 200 218 127 36.0 5e-29 MSTIGYVNISLEIWGAVLSLVFISSLYIGENIKTRTDRLFAAMLLCNGLLLVSDAAAWIF KGHTAAISYWGVRAANFMVYILGYILMALFTEYLTGYLSAGKPVSRWFARVVWGICGAGT ALTVLSQWNHMYYDFVGNNVYCRGDWFWLSQVWGLAGMAVDIGMLLSYRRELKKKEVWIL LSYIFLPVFALVIQIFIYGIAWLYLATTVCIIFVYVSLQANQAQKRRLREMELEQSKMTL MISQVQPHFLYNSLMGIKQLCDTDPQKASEALEHFAYYLRGNLDTLTQQRLIPFEIEMRH VNDYLYLEKMRFDQKLTIHLELQYTDFMLPAMTLQPIVENAVRWGITKKKGGGTLTVRSE AVKGDVVISILDDGAGFDPLKIKDDGRTHIGIENVRQRVMLQCGGTMHIESKKGCGTTVK IILPQKGGQS >gi|224461043|gb|GG657761.1| GENE 119 132859 - 133692 651 277 aa, chain + ## HITS:1 COG:CAC3390 KEGG:ns NR:ns ## COG: CAC3390 COG3947 # Protein_GI_number: 15896631 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver and SARP domains # Organism: Clostridium acetobutylicum # 1 233 1 235 370 89 27.0 5e-18 MNIIVADDEKLAMEYMLSLLRKLEPESQITGFTEAEEVFEYIRASQVDIAFLDIEMGGYN GIELAHKCKDIAPLLNIIFVTGYAEYMTDAFRLHASGYLMKPVRTEDLKAELDNLRHPPQ NISKRGIRIQTFGFFEVFVDSVPLKFRRTKCKECLAYLTDRRGARVTYGELAAVLWEDRA CNQAVQNNTQKVVSDLVKTLREAGLEELVIRSRRDIAINTALVDCDYYDVLNGDRERLRT FMGEYMSNYSWAEFKVGELIKLKEEVIHTTPSGRGNG >gi|224461043|gb|GG657761.1| GENE 120 133692 - 135350 1295 552 aa, chain + ## HITS:1 COG:CAC3352 KEGG:ns NR:ns ## COG: CAC3352 COG0840 # Protein_GI_number: 15896595 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Clostridium acetobutylicum # 4 387 11 399 703 113 26.0 8e-25 MRSIQTKFIILILSCIFICSAVIGGAGIINAEKAVDKDTAQLMNLRCSELAGDMDAMLSR IEQSVKTLVVFTDEQLESVERLKNDEAYLEEYTKRLESVAVNAANNTEGAVAVYVRFNPD LTPPTSGLFWSKTDLNGTFQQLVPTDFSKYSPTDTEHVGWYYIPLKNGKASWLAPYSNEN INVQMISYVVPIYRGNETVGVVGMDIDFNIIKDTINDVQIYDSGYAFLTDDKGNVMCHNT YPFGIPMSSVDESLIPLTAELENGTSGNSLYTYTNEGVEKKMAFRTLNNGMRLALTAPLS EIDKSKNELILQIAIALLIIAPLSVLVTVAITRRMIKPLRELNTAAKKIAEGDLSISLTQ QTKDEVGTLSDSFQQTVDHLQKYINYINSLAYRDALTGVKNKAAYQEAERRLEELMRQGC PEFAIVVLDINDLKYVNDCFGHDFGDMLIMDSCKLICKSFPHSPVYRVGGDEFAVILEGT DYKNYVELLERFQTAVDEYNMHNDSDSRLSIARGIAIYNSDIDLVFSNVFKRADDAMYQN KKDMKDRMRQDV >gi|224461043|gb|GG657761.1| GENE 121 135705 - 136811 668 368 aa, chain + ## HITS:1 COG:BS_yhaZ KEGG:ns NR:ns ## COG: BS_yhaZ COG4335 # Protein_GI_number: 16078046 # Func_class: L Replication, recombination and repair # Function: DNA alkylation repair enzyme # Organism: Bacillus subtilis # 5 360 4 356 357 385 51.0 1e-107 MPDLLKNVYNYNSLQKLAHTIQSAYPPFQADKFLQTTMDETWDKLELKARVRKISTSLAA YLPEDYSRALAILDKAAAVFTNGFFGIFFPDFIEVFGQDEENWDLSMSALERYTQYSTSE FAVRPFIISHEERMMAQMYAWSGHENEHVRRLSSEGCRPLLPWGQALVKYKKDPSPVLPI LERLKADPSLYVRKSVANNLNDISKTHPDLVISLAKEWYGKNEYTDWIVKHGCRTLLKKG NREILALFGYHDSASIKVDGFTLEPAAVPMGEDITFSFSISTEEAAKVRLEYAVDYMKAN GKRSSKVFQISEITLGRNEKKSCTKKHSFAEMTTRKHYPGVHTITLIVNGAKRERQDFEL TAGPGRTR >gi|224461043|gb|GG657761.1| GENE 122 136830 - 138932 1811 700 aa, chain - ## HITS:1 COG:lin2832 KEGG:ns NR:ns ## COG: lin2832 COG1455 # Protein_GI_number: 16801892 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 20 429 27 431 435 182 32.0 2e-45 MESRSSSIMSRFRNSISAQSIRNGLTMAIPFLIMGSFSLLLRNFPSDAYQAFLVHFLGGA AAELLETLYTVSLGSLALVLSITISLSYGLQAKTDTFILYPVVAVCSYLAFCGGMEGHDE YVFKAEWVFTAMCITLLSCVLFRQLLKFGSRLRKLHTTGAEYLFNISIQSLFPAVIIVAG FAVVGYALRTAWGSSNITNFGSYIFLNIFDRLSGNLAGILLYVVVTHVLWFFGIHGTNTL EAVSQKLFEHNISVNQSLLLAGSAPTELFSKTFLDTFVFLGGCGCALSFIIALCIISRKS HNRKIAYVALPSALFNISEIAVFGFPIIFNFTMMIPFILTPVVLTLTSTLAAQAGLVPVV TQSVEWTVPILLSGYKATGSVAGSILQLVNLLIGVLIYIPFIKRSEQKETLAFQKIVRRM EQDMAAGEGSGTLPHFLHHRYPYYSYAKTLAMDLSNAMHRGQLELFYQPQLSSGGNLHGM EALLRWKHPVAGYIAPPVLIALAYEGGFLHELSRYLLNLACRDAVSLEPHIKNDLYLSIN ISSKQMEENGFFDKSLDIIQSYKLEHVHLVLEITERSAMIISDTLMHDMSRLKDSGISFS LDDFGMGHNSILYLQERIFDEVKLDGKLVSQLPGNERSKDILSGIISMAQSLDLRIVAEF VETEEQRDMLLELGCTIYQGYYYSRPLCYTDLTAFLNSLP >gi|224461043|gb|GG657761.1| GENE 123 139268 - 139705 518 145 aa, chain + ## HITS:1 COG:no KEGG:Elen_0700 NR:ns ## KEGG: Elen_0700 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 3 143 4 144 146 146 48.0 3e-34 MKWHQLYDAGREPDMKQIGEYVGSGLWEELCVHLEEEYKTSPKVEYSGCSMQPGWNVKYK KGGRALCTLYPAEGYFTCMVSIGNREAAEAELLLTACTPYVKDLYERTGGYNGSRWLMID VTEPEILDDTINLIGTRAPKKSAAK >gi|224461043|gb|GG657761.1| GENE 124 139746 - 140051 160 101 aa, chain + ## HITS:1 COG:no KEGG:ELI_0344 NR:ns ## KEGG: ELI_0344 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 94 1 95 97 105 60.0 5e-22 MAKYMSCCGTVCSDCEYYPDSCGGCEEIEGKVFWLEYTGEEICSIYDCCMNGKRYVHCGQ CEELPCRRYDGEDPTKSAEENRADHLRQVEALRRRNEGERR >gi|224461043|gb|GG657761.1| GENE 125 140150 - 142087 1775 645 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 200 632 320 754 776 176 29.0 1e-43 MSWNIAPESISLVILGIIWVYSRKGSHTPTLKNQMFQGCLLVTFSAMFTNIVSTVMIYHC DTIPLWMTWFVTTVYFMLTPLMGLVYFLYSISVIYSEDPARKKIIGFGLIPGILYSLFIL MNPFTKNIFDINMAQGYVRGSLIEVTYIVFYAYCAASIVTVLANRKRIERKIYRILSTFP VLAVLVIIVQQIFPDIILSGSAATCAMLIIYLHLQNRQISMDYLTNVPNRQELLNMLSLM LNRHPETQFTLVVVSLREFRQINNVCGQRIGDEFLKAVCEFLCSIVEGVNVYRFTGDEFA VLFTEESDDVIEGYITEVQRRMKQNWCVESYQFNLSAVIGIIRHQAKDDTLEHMINAIEY AVNQAKSGKCGQVCYCDEEMLRKLRRRQQIKQILKEKLRDESFEMYYQPIYSVHSGTFRY AESLMRMNDTPIGPVYPSEFIPIAEETGMIIDITYVVLDKVCAFINRLKSEHIPIDAVHV NFPAVQFSQPGLAGRVMDIIEKNGTPPSAVKIEFTESTLAEKPQAVTDFAAEMKKFGIEM GLDDFGTGYSNFAMVINIPFGTIKLDKSLVGAMIGSKNSALGVKNIVRTFKELGMKVVAE GVETEEQKRMVEEIHVDQIQGFYYAKPMSEDEAEAFLRKNSRSVK >gi|224461043|gb|GG657761.1| GENE 126 142186 - 145761 2531 1191 aa, chain - ## HITS:1 COG:L148778 KEGG:ns NR:ns ## COG: L148778 COG4932 # Protein_GI_number: 15672133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Lactococcus lactis # 927 1097 1285 1450 1983 75 34.0 5e-13 MAQVSSQAELRTALEALDSFIQVTADFSISAQINIQYAVTIESYAGGSPAVLTKDNSYSS YMFRITDGGSLTVRNIILDGNGAAHPQADEANRSLIYVTGGTLKLLSGSILRNNNSYLEG GGVYVNSNSSYYNAFLMTDDARITGCASRTKGGGIMIASGNQGDSYSIAGAAFIGGNTAS DGGGVYVRSYAQGTGGTLTIAEQVQITDNTASGTGGGLNFSGYRNGGSAAATLTLTGSAA VSLNKAVNGAGVYFYSANDGDRFTLSGNAAVTQNTASQNGGGCYMTAQGAGVQFIMTSAS LTDNTAGTGGGLYLLTDSGGSVSVTQGLISGNHAAGGASGTGGGMWIRNQSPDAGLLTSF TNITMSRNEAEAHGGGMALYAGGSPFSFEVAGGTVSENQSAKDGGGLLLSNSGNGSLTLR QTALTGNTAGGSGGGMYHAVTSGDSSSSLTMTEASIENNTAGAEGGGLRLTSGSGILSAV LTDCTVSSNTARGNSGGGIWNGGSNASLTLDGSTSVTDNSTEEGNGGGIYFNSEEGSMLL TGSVKITNNHADAAQSDFGSHGGGICLVPGRLTIQDSTEIALNSARLYGGAVSAAEDSQV TVEGGTIHDNTSSEYGGGIWIHGGSAVTLSGGSLNNNKAPYGGGIYNDSYLYAEGLRNIS DGVYIENRTAVVRLNAPLAADSVIQLENSGYLSPNTDGTPIVVGEATDGYPLLSQTDAKA FQKPVRGFDGWEIRRSSDRTQILLAPSDYRIQYENLLGAANPNPGSYNSTSPDIHLLPPG SLPGSRFTGWYDAPDGGNSVTVIPHGSTGDRILYARWEAAGEDHTVTFKGGGSCCSRACG IPAPLTVRAGQSTLLPDAVPTRRGYCFCFWNTSPSGQGGSYLPGELLPPLSTDLCLYAIW KKRRFCCPCPPPLTASSFAARKLDAVSGSPLSGAWFALSQNGSVLLNSISDSLGRITFSG LRPGSYELSETMAPSGYKPDTAVHQVTVSEEGTVTVDGQPADGFPLYNTPSAEAHLTFTK ADTSTGQPLEGAGYTLSNGISALSDLDGTVDLGMLAPGTYTLTETKAPDGYILDSTVHTV NVTNDGHITVNGNDLTQFRPENTRMRSPKPVINTVMEGDAIVTGTGVPGAAVTVTFPDGS EAAAAVDAGGQWFIIVPSSASLLANQTVNARQTVPGMYPSDTVSVLVLSRV >gi|224461043|gb|GG657761.1| GENE 127 145910 - 148747 3140 945 aa, chain + ## HITS:1 COG:slr2104_3 KEGG:ns NR:ns ## COG: slr2104_3 COG0642 # Protein_GI_number: 16330590 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Synechocystis # 555 797 11 253 270 182 44.0 3e-45 MKNRSRLEIKKCGVVLLLLAAALTAVLVPCAGARAKEPQSGKVLKVAFAQVPGFTETDKN GNRRGIVVDYLNEIAKYTGWEYEYIDTDGETMVDEFLEGRYDLMGGTYYQEGLEEYFAYP DYNTGYSKSVLLASREDDSIKAYDWKSLSGKTIGVYERAVENIRRLKVFLDSNGIDCTLK TYSAEQLTDGNMYSYLENGEVDMILGNLGSDADVFRVVAEFDSQPHYIVTKPEDKEILDG LNMALGKIVDSNPHFAQERYDANIQDSSTANITLNDEEKKYVEEKKTVSVAVLKEWHPLY CRELKKDLHDGIIPDILEEIKEFSGLTFSYKYVDSYAEGLQMVENGEADLFGAFLGTDEE AAQKEMALTKPYVVLNDIIERNKSVSYPSEGLTGAVLEGRELPAEIEASEVKYYSNTAEA LRAVDQGEADFYYGVSAIMEQEIQNHHFTNVVPNTLINDRNDISFAMKRPAPGQLLTIMN KAINSLSSTQKDTIANQNMISSGTGEMTIIEMIYANPLMFVVICGVVFLLIVILILVMAR YRIHAVRMQNSLAKAEKENRAKGEFLSRMSHEIRTPMNAIVGLSDLTCMMDDVPETVRVN LSKIRSSSRYLLGLISDILDMSRIEQDMMTIVREPFSIGQVMNELESMMTAEAGRRELEF KLDLRIKSDRLIGDAVRLKQVLMNLISNAFKFTSAGGRIRVDVTETEASAEEAVFCFRVA DNGIGISEKDQERIFESFEQVGTNYSKSQGTGLGLAISKNIVELMGGKLELKSEIGKGSE FYFTAAFPTAASEEVHDESPAVDMPKRYLRDMCILLAEDNDLNAEIAEELLEMQGAAVRR ARNGRDAVKMFEDSAPGEFHAILMDIQMPVMDGLEACRVIRGMKREDAAVIPVIAMTANT FKEDVDMAAEAGMDGFVTKPVDVEYLYQVLCKAVRRDRPAQPDVL >gi|224461043|gb|GG657761.1| GENE 128 148780 - 149772 1033 330 aa, chain + ## HITS:1 COG:mll4270 KEGG:ns NR:ns ## COG: mll4270 COG2199 # Protein_GI_number: 13473612 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Mesorhizobium loti # 167 327 223 388 403 101 36.0 2e-21 MQTEKRLCEITRKLWHYYMLEPTEENFGKIMQTWDEKLSMIGTGRHEIFNTAEEAVKDFA GNQTEAGQISFEVLDEWYNAVMIRDDVGIVYGGIWVRECRDAEAEALIEMDTRFSIVYAL DDSGEWKMVHIHHSMPYFDQADGEYYPKALSAKVREAFELVELFRKRSEMDLMTGIYNHD SFQRKTEERLMKGNQLCFYIIDLDDFKSVNDTYGHSAGDAILKCLAKLIRKYFPEDAVVG RLGGDEFAVCEVCPGTQEERKERLRQMRAEYQQLSGGLLKENPCSYSVGIAEKGKESMTY RQIFERADEALYAAKQRGKDRTAELPGQGE >gi|224461043|gb|GG657761.1| GENE 129 149774 - 150508 544 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] # 1 244 1 244 245 214 44 5e-54 MKENKYDSDSFFKKYSEMSRSQQGLKGAGEWSELQKVLPDFRGKCVLDLGCGYGWHCLYA AQNGAEYVLGTDISAKMLETAREKNSHERIEYRRCAMEDLELPDHSFDVVLSSLAFHYVK EFQPVVKKISRVLSPGGFFVFSAEHPVFTAYGTQDWYYDEQGEILHFPVDNYYFEGKRDA VFLGEPVTKYHRTLTTYLNTLLENGFELLNIIEPQPPDDMLHIPGMADEMRRPMMLIVKA VKRT >gi|224461043|gb|GG657761.1| GENE 130 150526 - 152268 938 580 aa, chain - ## HITS:1 COG:no KEGG:CbC4_0855 NR:ns ## KEGG: CbC4_0855 # Name: not_defined # Def: membrane protein # Organism: C.botulinum_BKT015925 # Pathway: not_defined # 10 495 5 493 601 160 23.0 2e-37 MNIKNWDMPKITKDKVRFSTLNFLFIIAYVNIFQLVFGPENSITGVIFTIMMSASMVRDM TASPVKHLFVQAAVLVWMALAAYWVNTLSAPWSFTVNFITILIILYAFTYEYSSHMYFPY ILSYLFLVYISPADAGQLPRRLLSMLTGAVSILLYQWFMGRNRAAETARDVLVQMIDDIL LLIACKNRESSEPPSPADVHRSLSRLSQMVYERRRKVLCVSDAAFSMIAAGRGLEHLYLL VSELPDHLSLQNRSLLLHTETVLESFRAFLCQEAGHLPPREQCSFPSGSSGASEPFSRAL LYIRGRMLHMTDPERRTHYRRTVLSLKVRLQAALGLSPVRAVYALRTALLLSFAALLVQF WALPHGRWLMFTLASVSLPYADDVPVKMKKRLTATLAGGLISVVIYSLIPSAAGRTAAMM LSGYISFYFTDYAQTFACSTVGALGGAVFMTAFGLPAVGHIFLIRLGYILAGIAAAFAVN CLLLPYTRKMATRHLWKKYRTVTELLADICRTDEADTQLYYHLVIQAYMMEEKLAQNAEL EEWSGFPGLLRECREKVYQAHRTLAAKQNDAPAFEPGHLS >gi|224461043|gb|GG657761.1| GENE 131 152424 - 152870 518 148 aa, chain + ## HITS:1 COG:no KEGG:CKR_1355 NR:ns ## KEGG: CKR_1355 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 10 147 15 152 158 73 34.0 2e-12 MESEKTSEKFVQNLLLVMPNWHAKLVRPFKDTLNKEMSLETYYCLETLKLCGCVTMSELA RHLKVPKQQVTKLIDKLSEHQFVERVCREEDRRAVWIRLTPTAASYLDGYYLKNRAFITA LEEQLTEEELQRLNRAVADLSEILPRLS >gi|224461043|gb|GG657761.1| GENE 132 152867 - 154654 1794 595 aa, chain - ## HITS:1 COG:FN0856 KEGG:ns NR:ns ## COG: FN0856 COG0296 # Protein_GI_number: 19704191 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Fusobacterium nucleatum # 1 565 8 573 611 473 44.0 1e-133 MDYYGFYTGKVFDAYKYLGAHPENGGVTFRTFAPAARKISVIGEFNGWNEYDMDRIYDGN FWECHIQSAGPGMMYKYRVYRQDGTFIDHCDPYGFGMELRPASASIVRSLGEHRFRDCRW MSKRTDCKAKPLNIYEIHFGSWKKPSDVEDDWYTYTEMAELLIPYLKEYHYNYVEIMPLS EHPCDESWGYQNTGFFSPTARYGTARQLMEFIDLCHQNGIGVILDFVPVHFAVDGYALAQ YDGTSLYEYPHADVGRSEWGSLNFMHSRGEVRSFLQSAANYWLTEYHADGIRMDAISNII YWQGDPARGVNKTAVEFIREMNQGLKGMHPSAILSAEDSTSYPGVTKSADEGGLGFDYKW DMGWMNDTLEYFMTAPEYRSRDYHKLTFSMHYYYSDSYLLPLSHDEVVHGKAAILQKMSG DYEDKFPQARAFYMYMYAHPGKKLSFMGNEFGQLREWDEKREQDWNILSYPIHDAFHRFM KDLSEIYLSHPAFSAMDHDQRGFAWIDCAQEDRCIYAFERTNGNERVAAVFNFSGRPQKH YLLPADNSARYRLLLCSDAQIYGGNTPCGSGSLHPENGFIPLDLSPFCAVYYLIV >gi|224461043|gb|GG657761.1| GENE 133 154826 - 155377 489 183 aa, chain + ## HITS:1 COG:CAP0046 KEGG:ns NR:ns ## COG: CAP0046 COG1309 # Protein_GI_number: 15004750 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 2 103 7 107 188 65 40.0 4e-11 MDLRMEKTEKGIKNAFIELRSRKPLERITVKELCAGACINKSTFYAHYRDIYDLSDTMEA EIAESVTNSISHPEYIIENPAAFTQELFLAYQSQSSLTNTVFSGDQSSHLSDRIEESVKK MLFEKYPQHRGDMMLDIVLSYCIQGAYHAFHGNRRYDADERIAVIGRITDSIRPLYEEYY LNN >gi|224461043|gb|GG657761.1| GENE 134 155454 - 155804 493 116 aa, chain + ## HITS:1 COG:no KEGG:ELI_3756 NR:ns ## KEGG: ELI_3756 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 113 1 113 116 87 40.0 2e-16 MEFIDVLIKMEIDPQETIRRFCQNEAMLKKYLLRFGDEATYPNLVKAIEEKDHEEIEKCA HTLKGLSANLGMNKLSEKCAKIVSAMREGEYDKLDTLFPEVEAEYKRLNECLEELK >gi|224461043|gb|GG657761.1| GENE 135 155924 - 156742 897 272 aa, chain - ## HITS:1 COG:CAP0070 KEGG:ns NR:ns ## COG: CAP0070 COG0561 # Protein_GI_number: 15004774 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 4 270 5 278 283 175 35.0 8e-44 MSYEILALDLDGTLTNSRKEISRPTLEALIRIQEQGKKVVLASGRPTQGVLPLARQLHLD RYGSYILSFNGGRITDCRSREVIYNKTLPMDAVAPLFDIVNKYRDRGVDIVGYTSDALLS GGSTNKYSELESRINHMPLKAVDDFPSHITAPPNKFLITGRPEIIQEVKAEAAEAFRSYL YIYLSDPFFLEIMPPGIDKAHSLLRLLTGIGLTADEMICCGDGYNDVTMIETAGLGVAMA NAQPLVLEKADYITKSNDEDGVLHVIEKFMAD >gi|224461043|gb|GG657761.1| GENE 136 156802 - 158175 1659 457 aa, chain - ## HITS:1 COG:CAC2128 KEGG:ns NR:ns ## COG: CAC2128 COG0770 # Protein_GI_number: 15895397 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Clostridium acetobutylicum # 4 456 1 448 452 287 38.0 3e-77 MKNLTLENIAKACHGTYHGDESKKSREAAGVVIDSRKVEKDYLFVAIDGENVNAHKFIPD TIEKGALCVVSHEDLGDTDFPYILVESTGQALLDIAKLYRDSFDVTVVGITGSVGKTSTK EMIASVVSQKYKVHKTLGNFNNEWGLPITIFEMDESHEVVILEMGVNHFGEMRRLSSVAS PDICVITNIGIAHLEFFKTREGILQEKSQMIQDMKNGGSIILNGDDDLLSKMGPVKGVTP VLFGTNEDCQCYASGIVPMGLKGTACTIHLPDGEAFDCLIPTPGAHMVSNALAGAAVGAA LGLTADEIKAGIEAHTTLPGRNNIISTGSLMILDDCYNANPVSTKAAIDVLDMAIGRKVA VLGNMGELGNNEKELHREVGEYAAKHGIDVVCGIGDLAKEITESAAKGASTETHWFAAKQ DFLAEMHHIIKEGDNVLVKASHGMQFPEIVEQLKKFS >gi|224461043|gb|GG657761.1| GENE 137 158181 - 159245 1198 354 aa, chain - ## HITS:1 COG:PA4201 KEGG:ns NR:ns ## COG: PA4201 COG1181 # Protein_GI_number: 15599396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Pseudomonas aeruginosa # 1 345 6 330 346 201 37.0 2e-51 MKIIVLAGGLSPERDVSLISGAGICRTLRERGHKAFLLDVYLGLPYDSDKLNEVFDLPDA GLEIASGIKTTAPDIEAVRASRPDQSECYLGPNVVELCRLADITFMGLHGSVGENGKMQA TFDVLGIKYTGPNSLGCAMSMNKLVAKQVFKMTRVPTPRGTSLTEETKNTPLDELGYYLP LVVKPCSSGSSLGVYICHTEEDYKEAVRRSFDEDHQDEVVIEPFIKGREYACGILAGKAL PLVEIIPRDEVFSYENKYQDGGATEICPPVSLDAKTMKKIQRAGEKAFDALRMDVYARAD FIVDETDGRFYCLEMNGLPGMTPTSLLPRAALNAGMDYGELCEKIIEESMKVRG >gi|224461043|gb|GG657761.1| GENE 138 159264 - 160718 1447 484 aa, chain - ## HITS:1 COG:CAC1780 KEGG:ns NR:ns ## COG: CAC1780 COG1488 # Protein_GI_number: 15895056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 4 479 13 485 489 532 54.0 1e-151 MSRRDLTLLTDLYELTMMQGYYEQGQNETVIFDVFFRQNPCNNGYSVCAGLDQVIDYIKN LNFTYDDVDYLRSLGIFSEDFLHYLSGFHFSGDIYAIPEGTVIFPKEPLLKVVAPIMEAQ LVETAILNIINHQSLIATKTSRIVFAANGDGIMEFGLRRAQGPDAGLYGARAAMIGGCVG TSNVLAGQLFDVPVMGTHAHSWIMSFKDEYSAFRAYAEMYPDNCTLLVDTYDTLKSGVPN AIRVFKEMKEEGVHFKKYGIRLDSGDLAYLSKEARKMLDTAGFSDATITASNDLDEYLLH DLKMQGAAINSWGVGTNLITSKDCPSFGGVYKLAAIQNEDGEFIPKIKISENTEKITNPG NKTIYRIYDKTTGKVKADLICFVGETYDTNEDLLLFDPIETWKKTKLPGGSYTMREILVP VFKNGECVYKSPSVKEIAAYCRQEKKTLWEETKRLFYPHRVYVDLSQKLYEVKKSLLDQI SATN >gi|224461043|gb|GG657761.1| GENE 139 160840 - 161574 877 244 aa, chain - ## HITS:1 COG:CAC0965 KEGG:ns NR:ns ## COG: CAC0965 COG0204 # Protein_GI_number: 15894252 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Clostridium acetobutylicum # 2 244 1 238 241 120 28.0 2e-27 MIRFICVVIVLILYLVLGIPVLGVEWIIRKFRRKSADMSSLRLVQWVFRLMLCIAGVEVT VIGEENVPDEPVLFIGNHRSYFDILITYSRCRRLTGYIAKKEMLRYPLLRDWMKRLYCLF LDRSTPKEGLKTILKAIEYVKEGISICIFPEGTRNDGEELSMLPFHDGSFKIAEKTGCAI IPMSLNNTHAIFEQQFPRIKKTHVVLEYGAPIYPNELDKETKKHLGQYCQNIIQETINKN QRLV >gi|224461043|gb|GG657761.1| GENE 140 161609 - 163120 1399 503 aa, chain - ## HITS:1 COG:alr3871 KEGG:ns NR:ns ## COG: alr3871 COG1640 # Protein_GI_number: 17231363 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Nostoc sp. PCC 7120 # 6 502 5 497 502 493 49.0 1e-139 MKEQKRISGILLHPTSLPSPYGIGDLGAEAYEFVDFLERAGQHIWQMLPLTHTGYGDSPY QSFSAFAGQPLLISPAHLKELDLVQGYEILHCPVRDDEHIDYGVIIPWKQRIFKNAYRRF LTSAYQDSHRELITSYTAFCAQNAGWLDDYALFMACKDAHGGVSWLEWEDNFRCPSPEYK AQLKEDFEKECGFYQFLQFLFFEEWAKLKAYANRHEIQIIGDLPIFVSMDSADVWANQHL FQLDSRGYPVKVAGVPPDYFSETGQLWGNPLYHWNAHEEDGFAWWISRMRHQLSLLDIVR IDHFRGFEAYWSVPYGEENAVHGEWVKAPGRELFRAVEDALGSGLPIIAEDLGVITPEVK ALRDEFHFPGMKVLQFAFEGTQENDFLPHQFTTTRCACYTGTHDNDTTLGWYETLDPACK EKVKRYTNSDGTKVNKEFIRLCMGSIAAYAVVPMQDVLSYGKEARMNIPGTASGNWNWRF KKGILSALLAKELKDLAILYGRY >gi|224461043|gb|GG657761.1| GENE 141 163252 - 163659 378 135 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3813 NR:ns ## KEGG: Cphy_3813 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 134 1 138 139 118 45.0 8e-26 MKRLCSCVLLLACTLLLTSCSVTKTDKDKIRDIDFTVVDPEDIPEELAAQIEEARAEPFR LTYGDNGYLYIARGYGTKDTSGYSVEVPECYETSNAVCMKSSLLGPDKTEEVLKKPTYPY VVIKMEYSDKNVEFD >gi|224461043|gb|GG657761.1| GENE 142 163672 - 165231 1957 519 aa, chain + ## HITS:1 COG:CAC2903 KEGG:ns NR:ns ## COG: CAC2903 COG1388 # Protein_GI_number: 15896156 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: FOG: LysM repeat # Organism: Clostridium acetobutylicum # 13 511 16 514 520 113 20.0 7e-25 MEYMKKQVQTYRMGKVIADQFYIDDDYNVPDVKSDVMRIILGEGTLDVEDMKVVENYIRV TGKMNFKVLYVTEEGESRLSALEGRIPFEEMIYTEQEPEGAPFIKSSNIDLTVTTIHSRK LNLKALVELQVSSEGMDDLEVTTDILSDSPLYKRYTGRQMLRMLTSKKDTYRIKEEVAIS GTKENVGTLLWTDVTSRKLDTRLGADEMLIQGELMLFCFYESLEGKTDWIEQVIPYEGRI ECYGAQDNMYHQIYPELADVNIDIRMDEDGEMRLLGVEATLEMRLIVYEEENEDVLEDVY SLEQKCIPRITEETFEKLLMQNHSKCKVIEQLSLPEIKDSMLQVCHSSGKIQLERTEIVD GGIQIEGVLHISFLYVKADDVIPFDTWQGMVPFSYLLESNETSSDMTYDLTYAVEQLSIG LLGSDEIEVKAVLAFNSFLKQPVRISNIEEVDFEPVDMEEMERRPGIVGYIVRDGDLLWD LAKRYSTTVEGIMEVNGLESEQVKPGDKILIFKENMSIL >gi|224461043|gb|GG657761.1| GENE 143 165294 - 166169 1014 291 aa, chain + ## HITS:1 COG:BH0061 KEGG:ns NR:ns ## COG: BH0061 COG1947 # Protein_GI_number: 15612624 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus halodurans # 3 285 2 281 287 227 44.0 2e-59 MDKLELKALAKVNLGLDVLGRRSSGYHDVRMVMQTVYLYDQVIMEKKKKPGIEVETNLYF LPVNENNLAYKAAKLLMDEFKIKEGIKITLKKHIPVAAGMAGGSSNAAAVLYGMNRMFSL KLSEEELMERGVALGADVPYCIMRGTVLAEGIGEVLTPLAPMPKCHILIAKPPISVSTKF VYDELDSHEITKHPDIDGIIAGLNGQDLARIAGSLGNVLEEVTVREYPVIEQIKNTMKEQ GALNAIMSGSGPTVFGIFEEKSRAREAGRKIKETGATKQVYVTNVHNARRK >gi|224461043|gb|GG657761.1| GENE 144 166172 - 166849 1031 225 aa, chain + ## HITS:1 COG:SMb20773 KEGG:ns NR:ns ## COG: SMb20773 COG1802 # Protein_GI_number: 16265213 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 15 220 23 228 228 111 33.0 1e-24 MEPNFQVNMNEYLPLRDVVFNTLRQAILHGELKPGERLMEIQLANKLGVSRTPIREAIRK LELEGLVLMIPRKGAEVAEITEKSLRDVLEVRKALEELAVQLCCDKITKEEIRELEKAAE DFKTAIRNGGLTEIAEADVKFHDVIYMATDNQKLIQLLNNLREQMYRYRMEYLKSDEVYP HLISEHEAIIRHVEGKEKEKATEVVSRHIDNQVEGVVDTLRTKKS >gi|224461043|gb|GG657761.1| GENE 145 166938 - 167618 1017 226 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1003 NR:ns ## KEGG: EUBREC_1003 # Name: not_defined # Def: stage II sporulation protein R # Organism: E.rectale # Pathway: not_defined # 47 214 40 203 211 167 48.0 4e-40 MREEIEKRYRKKQLICVILGVCIALILTGSIVNRRMKVVDAKVRRTQEKLAGEVFRFHVL ANSDSEEDQALKLKVRDAVLAYMKSDMKDETTGEPSAEDTKQWAQRHLGDIEEKAGEIIR EEGYSYGVKANVQVCHFPDKTYGDITFPEGDYEALRIEIGKAEGHNWWCVLYPNLCFMST TCAVVSDEGKEELKEVLTDDEYEMVTATSDFKIKWFFFGGDAGKDQ >gi|224461043|gb|GG657761.1| GENE 146 167637 - 168833 1354 398 aa, chain + ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 1 388 11 400 403 313 40.0 5e-85 MTEFLVRRFVKNHEEVEKVSVRTAYGVLASAVGIFCNVLLFVVKAVTGFMLHSISVTADA FNNLSDAGSSVIGLVGVRMAGKPADEDHPFGHGRIEYIAALVVAFLVLQVGFTFFKDSVG KIREPEMLKFKLVSVIILVLSVGVKLWMGVFNRKLGQRINSKVMLATATDALGDVITTSA TIASLLFWKVTGINIDGFVGLGVSLVVMWAGIGIAKDTLEPLIGEPVPAEEYVRISRFVE KYDGIVGSHDLIVHNYGPGRNMASIHAEVPNDTDIEDSHEIIDRIERDAARKLGIFLVIH MDPVETKNEQVLVARNHVEEAVSRLDRRASVHDFRMVDGKEQINLIFDLVVPREYTKEQQ DSLRAALIEELHKTDKRYECVITVEMSFVASAQKGQEE >gi|224461043|gb|GG657761.1| GENE 147 168837 - 169550 883 237 aa, chain + ## HITS:1 COG:CAC3591 KEGG:ns NR:ns ## COG: CAC3591 COG3884 # Protein_GI_number: 15896825 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Clostridium acetobutylicum # 12 233 16 244 248 110 28.0 3e-24 MYSFDSRVRFSEVDHTKQITLPGIINYFQDCSTFHSESLGLGVDYFAEHGRAWVLNAWQV IAKRYPKLGEEITVSTWATEFNGLYGLRNFRMTDGDGRTAAYANSVWVYMDMVKGRPVRP LPEEIEAYGAEEPLDMEYAPRKISLPENWEEKEAFQVRKYHIDTNEHVNNCQYVQMALEA LEEELCVRQVRVEYRKSAVCKDIIRPRVAREDGRIVVSLTDAQGKPYAVVELEENIG >gi|224461043|gb|GG657761.1| GENE 148 169547 - 170380 324 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 21 267 16 270 285 129 32 2e-28 MTLENGLGKKQVLSVVKLVDFGVYLGTEEEKVLLPKKQVPPGVKAGDKIEVFLYKDSSDR LIATTAEPALTLGEVAALTVADTGRMGAFLDWGLEKDLLLPFKEQTEKVAKGDRVLAALY VDKSRRLCATMKVYDRLRTDSPYKKEDHVSGTVYEFSDNFGVFVAVDDRYSALIPKREAF GSLKIGDKIEARVVKVHEDGKLDLSIREKAFIQMDADAAAIIKRMEEYGGALPFTDKAEP ELIKKEFGLSKNAFKRAAGRLLKEGKIEIKENSIVMK >gi|224461043|gb|GG657761.1| GENE 149 170523 - 170756 380 77 aa, chain + ## HITS:1 COG:no KEGG:Closa_1693 NR:ns ## KEGG: Closa_1693 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 77 1 78 95 100 64.0 1e-20 MKVQNITNIEKFFEVVDSCSGKVELVTGEGDRLNLKSKLSQYVSMANIFSNGEIPELEIV AHEKEDIDKLVAFMING >gi|224461043|gb|GG657761.1| GENE 150 171071 - 176671 4491 1866 aa, chain + ## HITS:1 COG:no KEGG:Shel_11500 NR:ns ## KEGG: Shel_11500 # Name: not_defined # Def: conserved repeat protein # Organism: S.heliotrinireducens # Pathway: not_defined # 957 1465 37 567 3920 205 37.0 2e-50 MKKLRKWIALLLAVVLVGANAVYSMSSALWASEIESQEEAAGSQTPNETEVNEQVQSSTE GVNVQVVEEKPEQKQSQPAAQKTETQPSGGQQDHNSEPAGQEPEADAPSEVKYEVIIHKP EVDGGTVKAWTSGDRRTVTYDASGRYKEEVAEGTAYNIEITADAGYEIDKVTGRNEDEIS PAGTDGNISTYTIAGIAEDKEIFISFKEIKAEKTENNAVLSSNDNKTAERTDAGDTAAAE SIKIRGNNKVMAGQSVELYADVEPEDAAGDITWTSSDPSAAEVTAEGDSSRQARVTGVKA GEVTVTAATQDGKVNTSFNITVKEKYTVNYYDQNNFLVKSEEVQPGTFLQGYTFTAPENQ SFLGWYWQGRYLSNDEITQLEVTSDMNLHAVCVNIYTVTYRYGWDGAATTKSETEHVTAG GQPQTVPSVIKASTTGRNAKITAVDAAGYVFTGWKNEETGETVNNPAEAGISSDTTYVAQ YEKESGNKFTLRTGSSGVKVYYAFKKQNGTPQDITDLAQLPVGSSITMNAAGNARILFYV SVERGYMTDTVYAPVSSNMAGEYFSFEKKHPDSTYYYFADQSNKAHEELGCDYWFTFGTW NNGNADRWFTITANPVKHTVVYDSAGGTPEPADTNKYTIHDTVTLSSERPEKTGYTFAGW KLEQTGDVYQPGSRIVMDEIYDDLNGSTQLKFTAQWKEHEQRIEGTIDNGTARFVSDEAV DEAEADNEVIGYVTSAGRSPEVSFKASEGYFISKVTVSKDGQTTTNRNVYGRKEYTYPPQ SNVTTDIMVNVETEAEDAYIIFHRNDGSENDIVNTLTGKTGQTLVNTDMPSDIEGPEGYV FEGWYKTKDCEEGDKVTKLPSAYPAGETHYYAKWVRDTSVFDAALKGYEGVYDADRHGIT FDISDKLLAGEAVSYETESAGKTEDNPQFTDVTEQKVTVTVTDKENGNTVWKGTASVKIT PAELSVKTEGAEKVYDGDKLTAAGNISGFVKGETAAFEVTGSQTEVGGSLNTYDITWNGS AKKDNYIVKEDLGTLKVTEYAEQITVTTTGGIYTYDGAEHKAKVEVSQLPKGYYVEEAST DAKAADVTKEAVEARCDKLVIKNVSGEDVTGKLNITYKNGSIVVNPARLTVVTESAEKPY DGGALKAGGKMDGLVNGETAAFTVTGSQTKAGSSTNTYKIDWNGTAKESNYAVHETLGTL TVLEYADEIVVLTEGGEFTYDGSEHKAVVEVRNLPAGYSAEAYSDAAVTDVTTDKVTAAC DHLVIKNADGQDITTKLRIRYVDGSIQVNPAVLTAVTYSADKEYDGTALTADGSISGFAD NEDAEFAVTGTQTDAGTSLNDYDIRWTNAKESNYVISETKGTLKVDPKKVTITVDDSRKL YGEPDSPDSYTGSISPALVNGSDLGAVTYKRTGAGGDDNEKVGIYKDVLTADYTSNSNYD VKVVPGTFEIAGQITYDGNGSTSGSVPVDGAEYSYEADIQIMDRGELKRDGALFLGWSTV QSPLITTQAMEDEAMESIVGASVKMGRESVVLYAVWAVDIAGPGTGPDDVPDYKEFKVTY DGNGDQVTGSVEDTGLYEENYEYTVKDNGFQRAGYVFDGWNTQADGNGMSVKPDESYTIT GDVTFYAQWEEDVIGEGENPNEPDGIPDRYQAVVYFEAVNGTVSIDKTVVTLYDMDGNPS ELGIGTLQYTAEARAAGGYTQSSLTWTPQTPVVGMKITGTRTFTAEFDREETPAAVTPGG TTPGGTTPDGTNPGGTAPDGNNTVTPAAVIQAITEPVAELAEGIGNAIGDNVRQLVQSDD EGVPLANRASKDHKCCILHFLLVLLALIVEIEYTRSMKKRQRRIFELREEIALADKDIEA GKNQAA >gi|224461043|gb|GG657761.1| GENE 151 176918 - 180316 3879 1132 aa, chain + ## HITS:1 COG:CAC0516 KEGG:ns NR:ns ## COG: CAC0516 COG0587 # Protein_GI_number: 15893807 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Clostridium acetobutylicum # 2 1124 37 1167 1167 1134 52.0 0 MKELGMDSVAITDHGVMFGVIDFYRAAKEAGVKPVLGCEVYVAPGSRFDKEAGGSGEDRY YHLVLLAENDMGYHNLMKLVSRGFTEGYYYKPRVDLELLEEYHEGIIALSACLAGEVQRN IMRGMYSEAKAAAQRYEGIFGEGNFFLELQDHGMQEQKMVNQSLLRLSQETGIELVATND IHYTYEDDVKPHDILLCLQTGKKLADEDRMRYEGGQYYIKSEEEMRRLFPYALQALENTQ KIADRCNVEIEFGVTKLPKYDVPEGYTSWEYLRKLCFEGLKRRYPDGEEALAERLEYELS VIQSMGYVDYFLIVWDFIKYAKDHDIIVGPGRGSAAGSIVSYCLDITSIDPIKYQLLFER FLNPERVSMPDIDIDFCFERRQEVIDYVVEKYGSDRVVQIVTFGTLAARGVIRDVGRVMD LPYAFVDNIAKMVPTELNMTLERALAMNPELRRVYQEDEQVRELIDMSKRLEGLPRHTSM HAAGVVISQKAVDEYVPLSLGSDGSVTTQFTMTTLEELGLLKMDFLGLRTLTVIQNAAQL AGVSTGQPIDMDNIDYDDKKVLSSIGTGRTDGIFQLESGGMKSFMKELKPQSLEDIIAGI SLYRPGPMDFIPQYIKGKNNAQSITYDCPQLEPILAPTYGCIVYQEQVMQIVRDLAGYTL GRSDLLRRAMSKKKGDVMKKERQNFVYGNEEEGVPGCIKNGIDEKTANKIYDEMIDFAKY AFNKSHAAAYAVVSYQTAWLKYYYPVEFMAALMTSCIDNPGKVAEYIYTCRQQMGIEIMP PDINKGLGNFTVENGRIRYGLAAIKSIGRPVIDAIVSERGAGGPFKTLKDFIERMSGKEV NKRTLENFIKSGAFDSLGGTRKQFMIIYVQILDQVNQERKYSMTGQMTLFDMVDEDQKAE FDIPLPDVGEYEKENLLSFEKEVLGIYLSGHPMEEYEEKWKKSITRTTLDFQLDEETGQT KVHDGAQEVVGGIIADKTIKYTKNNKTMAFLTLEDLAGTVEVVVFPKVYEKHQRYLTEEN KVFVKGRVSEEDEAASKLICDDIVPFEQTKKELWLQYDNKAAFLAREAELYDLIKESDGD DQVVIYCKAEKAVKRLPRSRNICVEPGILSRLTNYLGESCVKVIEKPIENIS >gi|224461043|gb|GG657761.1| GENE 152 180383 - 181360 1183 325 aa, chain + ## HITS:1 COG:CAC0517 KEGG:ns NR:ns ## COG: CAC0517 COG0205 # Protein_GI_number: 15893808 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Clostridium acetobutylicum # 6 324 1 318 319 360 60.0 1e-99 MADKIIRTIGVLTSGGDAPGMNAAIRAVVRTALGKGLKVRGIRRGYQGLLNEEIIDLSAR DVSDTIQRGGTILQTARCEEMRTEEGQQKAAAICKKYGIDGLVVIGGDGSFAGAQKLSRL GINTIGLPGTIDLDIACTEYTIGFDTAVNTAMEAIDKVRDTSTSHERCSIIEVMGRDAGY LALWCGIANGAERILMPEEHDYNEDAIVQDIQECRKRGKKNYIIINAEGIGDSMNMAKRI EEATGMETRATVLGHMQRGGSPTCKDRVYASIMGAMAVDLLIEGKSNRVVGYRHGEYVDF DIDEALGMKKGIPTYQYEIARELAL >gi|224461043|gb|GG657761.1| GENE 153 181483 - 182304 1061 273 aa, chain + ## HITS:1 COG:BS_racE KEGG:ns NR:ns ## COG: BS_racE COG0796 # Protein_GI_number: 16079891 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Bacillus subtilis # 10 272 5 268 272 234 43.0 1e-61 MNSNKDRTAPIGVFDSGVGGLTVAREIMRQLPDENIVYFGDTARVPYGSKSRNNIIRFSR QIIRFLETKGVKAIVIACNTASALALDVVKEESGIPIIGVIVPGARAAVKETKSKKIGVV GTEATIQSHTYSKVITDMEPEASVIGKPCPLFVPLVEEGFAKHHVTDEIIEYYLDEMKHS DIDTMILGCTHYPLLRSRIMEYFGENVNIVNPAYETAMDLKALLAEHDMENNSGSLARYE FYVSDTAEKFKHFANSILPYNVETIQQINIEDY >gi|224461043|gb|GG657761.1| GENE 154 182313 - 182756 640 147 aa, chain + ## HITS:1 COG:CAC2894 KEGG:ns NR:ns ## COG: CAC2894 COG4506 # Protein_GI_number: 15896147 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 17 145 10 137 137 82 38.0 2e-16 MTKDVLLSISGLHFDAAGAEADENEPIEVITPAVYYNKNGKHYVIYEEPVEGMAGTVRNT IKITGDSVFEIIKSGLASAHMVFEKDKINMTQYETPYGELLIGIHTRKIDVDVTENNIAI AVNYALDINDEKVADCNIDMNIKALER >gi|224461043|gb|GG657761.1| GENE 155 182784 - 183224 539 146 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3788 NR:ns ## KEGG: Cphy_3788 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 140 1 140 151 150 58.0 2e-35 MSTLTIVLLVILIVLVIACVVLYFLGKRAEKKQAAQQEQLDAAAQTVSMLIIDKGKMRLK DAGFPPVVVEGTPKYLRRSKVPVVKAKVGPKVMTLMCDAQVFPVIPVKKEVKATVSGIYI TGVKGLRGPLETPPKKKGFFKRITGR >gi|224461043|gb|GG657761.1| GENE 156 183390 - 184865 1751 491 aa, chain + ## HITS:1 COG:BS_ywnE KEGG:ns NR:ns ## COG: BS_ywnE COG1502 # Protein_GI_number: 16080712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Bacillus subtilis # 16 491 6 482 482 461 47.0 1e-129 MMQNAAQAVGTAYWWIIDHLLFINIIFSLLIIFFQRRNPTTVWAWLLLLYFVPILGFILY LVLGQNFRKERMFKMKEIEGEIKYAVRRQEESIYRRKLRLRDPELERFKSLILYNLNEGE AVLTDNNDIRIYTDGREKFQALMTEMEHARNYIHLQYYIIRNDELWQEIEEVLVRKARQG VEVRVLFDSMGCRGMHNADWVRLEKAGIEVAEFFPAVLGKLQLRVNYRNHRKIVVIDGRI GFVGGFNIGREYLGLDKKFGYWRDTHICIEGSAVTSLAVRFVLDWNYAARENLFLEDRLF EIPTYIRNGRDPVQIISSGPDSRSQEIRNNYLRLIHMARSSIYIQTPYFIPDEDIRDALV IAARSGIDVRIMIPCKPDHPFVYWATYSYAGEMIEAGARCYTYDNGFLHTKCLCVDGLVS CIGTANMDIRSFSLNFEVNAVVYSARTTEKLMEAFENDIPKSTLITRKGYERRGLVIRVK EQFCRLLSPVL >gi|224461043|gb|GG657761.1| GENE 157 184993 - 186069 1468 358 aa, chain + ## HITS:1 COG:SP0400 KEGG:ns NR:ns ## COG: SP0400 COG0544 # Protein_GI_number: 15900319 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Streptococcus pneumoniae TIGR4 # 32 316 115 396 427 144 34.0 3e-34 MKKKLVAALALVCAGSMILAGCAGSNQIDTDEVTVEGYKGIQVDEVEKASKVTDKDVESA IQSTLESKATQKEITDRAVENGDTVNIDYVGKIGGETFDGGSAEDYPLTIGSGVFIEGFE ESVIGHNIGETYDWNGKFPENYGNADYAGKDVVFTITVNKITQDEVPELDDKFVKSVSEK SKTVKEYKKEVKKQLEEEAETAYNDNLSSAVWEAVLDKSKVKKYPKKDVKDITDNLIQQY KDAAEYYQMDYDTFIQEQMGATVEEFEEQVNKAAKSSVKQTLVTKAIADKEKIKLSDDEY KKQLKKMAETYGYENADALKKAAEEDDLKEMALNNLVKDWLAKNCVQVAKTDKSDSDK >gi|224461043|gb|GG657761.1| GENE 158 186122 - 187516 1069 464 aa, chain - ## HITS:1 COG:SMa1548_2 KEGG:ns NR:ns ## COG: SMa1548_2 COG2199 # Protein_GI_number: 16263296 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Sinorhizobium meliloti # 299 457 3 165 180 115 40.0 2e-25 MCDIPVEELASVKKKMRSDSYLLYIYSPADDICRDKDTAADELFARPVSKDYLQKRIRHI CGEIKLRADEWLSSTYLDVLIDSMPDLVWFKDNNGIHVKVNNVFCHTVGKERKDVTGKDH CTIWDVEVDDCEATEAIVRRERRTCQFNELVKSSGGMRQFRTYKSPLFDRDGNIMGTVGI GHDVTVLENMSNEMEILLNSMPFAILLKDSAGAIVDVNLKFEEYFSSRRDDVIGRPFHEW HESMFHGLSSVKKNDTEEIHLPEDDGERILEITHEPIYDIFESIVGELTIYRDITEESLL KEQLNNNSNTDFLTGLCNRRFFYEYFSETHSYEQISILYVDLDHFKMVNDTYGHQIGDEA LIMVAATLKKCFPDNLIARIGGDEFLVARTEPVAEEELVRQADMLIDGLQDAFNTNSCMK VLSASIGIAYTTEPAKKIDDLIKESDIALYKAKQSGRSRCCVYR >gi|224461043|gb|GG657761.1| GENE 159 187737 - 189416 1603 559 aa, chain - ## HITS:1 COG:alr1230_2 KEGG:ns NR:ns ## COG: alr1230_2 COG2200 # Protein_GI_number: 17228725 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Nostoc sp. PCC 7120 # 321 559 24 261 266 162 36.0 2e-39 MELHEGIPDSFHIDTDAFYNAIVNSTEDYIYIVDITKDISLVSENMARDFDLPGRLVPGL IPLWGELIHEKDRQRYYDSIDEMMAGYTDIHNVEYQILNKKNEYIWVCCRGLLTRDESGA PTMFAGVVTPVGSKGKMDRTTGLFTQEECKNHIEAYLNLGNTSGGFLLLGIDDFKRINNL KNHTFGDTVLRKIAQDIQHMIPHKAEIFRFDGDEGAVFSPGATLEDMYDLYSKIHLYANK EHEIDGISYYCTISGGVAMLGTDADNYLDLIKCAMSALEASKKKGKNMCTAFTPALLQSN LYIMELTNELQRCVMNGMEGFSVVYQPFVKTDGLCLKGAEALLRWSSPAVKKVGPAEFIP LLESSGTIVPVGKWVLDKAFCTCKKWVARWPDFVMNINVSYVQIIEKDFVPYIEELLKKY DLPARHIVLEMTESYFVTDMPALKTTFQRLRDIDICIAMDDFGTGYSSLGMLSQTLADIV KIDRMFISLINDKEHFFNRSFIQAVINLCHSIGISVCVEGVECADELDTVQNMSADSIQG YYISKPVSQDEFEEKYWDS >gi|224461043|gb|GG657761.1| GENE 160 189534 - 191465 1552 643 aa, chain - ## HITS:1 COG:CAP0099 KEGG:ns NR:ns ## COG: CAP0099 COG1193 # Protein_GI_number: 15004802 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 1 634 1 621 629 384 35.0 1e-106 MNNKSLELIGYYEITEKLAKQALTARAKERARALHPFLSESELRKNLRETTQAREMIGLL GLPPLPAMEHIEAFIEKAVIGELLMPEHLEEMGLFLNAVRRLKLYLKKGEEQHIQIAFYN DNLVLPEELKDNIERCIRAGRVDDHASGYLNDIRRQIKTSEEKINEKAARALKAAGASVS ESFIVQRNGRLCIPVKKECRLRVPGSIVDKSSTGATVFIEPETVASLREELEILKIQEDS EERRILYELLEQIALNEEALREDVRVIALLDFVFAKAKLSFDMKAAEPHINLSRYISVTG ARHPMLDNETCVPLDFEAGRGVSGIIITGPNTGGKTVALKTVALISAMACAGLHVPCASA DIAMNNQILCDIGDGQNMTDNLSTFSAHIKNVLDILKRVTKDSLVIMDELGSGTDPAEGM GIAVAILEELRKSGALFFVTTHYPEVKEYAGRHPDIANARMEFDKETLKPLYRLTIGESG DSCALYIAKRLGVPDNMLAAAAREAYGPRAEHIISDLGTHSSPEPFRKISAPRLKPVQDI KLPSSQGQEFTRGDSVTILPDKKIGIVVRPADSRGNVLVQVQKEKFYVNRKRLELKVAAS QLYPEDYDFSIIFDSAEHRKIRHQMERKYEAGLEIESFDRHLP >gi|224461043|gb|GG657761.1| GENE 161 191471 - 191557 59 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWSFIIIKIAAGIRAQGHMPCTPAPGKE >gi|224461043|gb|GG657761.1| GENE 162 192076 - 193065 1259 329 aa, chain + ## HITS:1 COG:mll3596 KEGG:ns NR:ns ## COG: mll3596 COG1879 # Protein_GI_number: 13473104 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 58 328 52 317 324 71 26.0 2e-12 MKRNVKRIIGALLCAAMVVSMAACGSKAKEEGSDSGKAAKTEGDTIKIGFIPSDLAGFFA QLKTGLEKYAKEEGNVQVTTKECIDSAKKIDAINNFANGGYNVIICHVDNAVALKPAMEQ AQSKGVYFFAYDTDIEGADGFFGADNYAMGQVIGKMLSEWVNKTFDSSEEVQCGILNYDP FPFLVERRKGIEAAIKEEAPNVVIVDSQQAGLEDEGTSVGNAWFTKYPDMKAVAGINDAG CYALYQAWKSKGKADQDHVGIFGVDANEPALQAIKEGGMYRGTASSDPDSVTKNMIQNAL EVSKNGKLETRDYLFVPEPVTIDNVDDFL >gi|224461043|gb|GG657761.1| GENE 163 193141 - 194652 182 503 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 269 480 40 248 329 74 26 5e-12 MSVILKTNNIVKTYPGVIALNDVSIEVEEGEIHGLIGENGAGKSTLIKTIAGAIAPDSGV IEIAGSTYRMVTPAQSRRLGIAAVYQEFNLAGSLSVAENIFCGEKEGHGIIFNRKELNKR AREILDMYDVDIDPAVLVKELSVAKMQLVEIAKAIASKAKLIIMDEPTAPLTDNEVKALF EIIRQLKESGVTIVYISHRLEELFEITDRITVMRDGEVVGVISTGDSSKDQLISMMVGRS LSEAYPGRKTAPGGVLLELNKITGMGDRDISLSLREGEILGLAGLVGSGRTELARMLFGL DKIQSGDIFIKGRKVNIKSPWQAIANGIGFLTEDRKAQGVSLSLSIKWNITASILKQISG ALGIIDTDKENEIVDGLQKSLSIKAPSVEQLVKNLSGGNQQKVALAKWLASDSKILIMDE PTRGIDVGAKHEIYLLMNALAERGVGIIIISSEMEEILGMSDRMAVLYEGRVSGILEKPE FSQVNVMKLASGERLKQKESKCL >gi|224461043|gb|GG657761.1| GENE 164 194649 - 195656 1261 335 aa, chain + ## HITS:1 COG:PM1327 KEGG:ns NR:ns ## COG: PM1327 COG1172 # Protein_GI_number: 15603192 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Pasteurella multocida # 1 325 6 341 347 162 35.0 1e-39 MNTVKKYFKEYAVVVFLAAILILMSILETDAFLSFSNLMNILDQVSVVGILTTGILFVML SAGIDLSVGGMMAFAGVMVVRLVVSAGMPYPLAIAAVLVLCILVGMLQGYIIVSTGIFPM IGTLAMMGILSGAAYVVSQGSYLTFPADITVTFLGQGRVGPEGFQIPFAVIILEVILIIA WFILNKTYFGRYFYLVGSNIESARVSGINTRAVQIISYGISALAAGFGGVIYMSRMASGS AQISADGWEMECLTAAVIGGVSLMGGEGKVSKAFTGVLIMGVLNTSMIMLGIDAYWQKIV TGLVFLAAVCFDGIQKNIAAGAKMKIVAEKAVPAK >gi|224461043|gb|GG657761.1| GENE 165 195699 - 196661 882 320 aa, chain + ## HITS:1 COG:lin2194 KEGG:ns NR:ns ## COG: lin2194 COG0657 # Protein_GI_number: 16801259 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Listeria innocua # 77 317 97 345 347 145 32.0 1e-34 MIRTYHKLFEPEYNEVAPEVIIEPAEIMDMDDPQVSRTQLKMQAVALFTSEWRRRTCWQD MMNIRTRSVPYEREGYEIPCTIYDPREDPAGTLLYFHGGAWSMNDHEVYDQVLRGIALFG KVRVIAPDYRLAPEYKFPTGLEDCYAALAHIEREKLAEGKLFIGGDSSGGNFAAAAALMA RDRGRKDIAGQVLIYPAVIMNPELPLKSEQRYGSGYFLEYRSGQKFTSYYFDDYEEQSDH PYASPLCAGSLKNLPPALMIMAECDPLLDQELMYAARLIDEGTDVAYKYYEGMIHAFIHR PLKETIDTYKAIGDFIQSHA >gi|224461043|gb|GG657761.1| GENE 166 196806 - 197654 898 282 aa, chain + ## HITS:1 COG:yphF KEGG:ns NR:ns ## COG: yphF COG1879 # Protein_GI_number: 16130473 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 25 249 56 285 327 88 27.0 1e-17 MKIGVCMSDMTHTTFIEMLDQMHRKADKLGVEIIEFSSDSDPGNMVEGLENFIAAGCDAI IFQNFDQDASEYVVSEAVKKGIIVISYDNYSDAATYVYVADNEKLGFAIGHMAGDWINEN LGGRANVAICDYSLINFLNNRADYIEEGIRERAPESKIVARQDAGLLDQGVNFGEILLQA HPDVNVVAGVNDNGVLGVKEAFESAHKTGPSIAMFGCDATEEGIKAIREDSVFRGTVYFD LKQAGEDMFMAAVNAYLGDPGEKRVVTFQMVPIMKDNLDIVK >gi|224461043|gb|GG657761.1| GENE 167 197713 - 198663 1209 316 aa, chain + ## HITS:1 COG:VCA0129 KEGG:ns NR:ns ## COG: VCA0129 COG1172 # Protein_GI_number: 15600900 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Vibrio cholerae # 6 298 36 330 332 191 41.0 2e-48 MLSRWIALMAIVVLMSLLESSFSTFDNVMTIFRQTSMLTIMSVGMLFVLLTGAIDLSVSG ILSFVGVFTALAATKMALPLPAAVFLGLVCSALFGLLNGFIVTKTRIPALIGTLAMQQVI LGISYTICGGKPVYGISPSFKQIARAMLFGIIPIPIVITVVVLALGEFLLKKTYLGHYFY AVGSNEEATRLSGIDTDSVRIAAYTMNGFLAGVAGIIMLARVNSGQPKAGSGYEMEVLTA VVVGGVRITGGEGRISSVIVGSLIMGFLSNGMVILGFNEYYQILIKGLVLLFAVGIDSMQ RTGAGGRRKKIKSYKA >gi|224461043|gb|GG657761.1| GENE 168 198668 - 200170 1227 500 aa, chain - ## HITS:1 COG:mll7081 KEGG:ns NR:ns ## COG: mll7081 COG1129 # Protein_GI_number: 13475900 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Mesorhizobium loti # 20 486 21 484 507 120 23.0 8e-27 MRKEVLRLNNIYLTSNTYGSLRNISFHLLQGEFLGLFGILNSGVKLLVRILREQAGITSG SIYRSETRVTQLLPPLQPCLDIGYVGQTGTLMPGFSIKENLMISRRTGRKKSLLIDDNSL NAEIAVLLEDLGIDDLITPAAKLNELSPFERHLIEIAKLVYAGKDIIMLDEIGYSYMETD FRRLSVLINKLKEKNISVIYVCNSIDYMAEYLDRIIILRDGRNAGTMYSDSFDRKNLMRM LLGPRHTSASSTPLIKAGRPVIRFSYYGSSCLQPVRLSVSESETVGIFSLENSIPEELAE LIVSVNLRRKRLKHKYYKTDSGWEAELYDPGKELVVIPQNAAAEATYPEKSILENYLLLI YRPTSKMGCINADFSRYMEHILDKWYGKETGWSRRTKLKDTDEATQKKSAFHKWLFHRAN FSYIEFPGIYADPLLQQSIFALIHEMAEHKMGILIRSNNIYELLTLCSKLVIISKQGRSV VLSREEALSIDLFELLIDMK >gi|224461043|gb|GG657761.1| GENE 169 200180 - 201079 564 299 aa, chain - ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 53 290 357 591 602 148 33.0 1e-35 MNTVLLLCVISIFLCLLFFLSLPAIRRDRYMRHTLLSLKNGTFSDAAPNSHMTFQTQLDE LLYLYKKHYMISYRKDELNSSSQLMALQSQINPHFLYNTLESIRAQAELDDALQISEMTE ALAAYFRYNINRGGDVVPLEDELANISNYLHIQQFRFGERFSISFMIDGDRNTINNQAIP KLTIQPIVENAIYHGLEETLTSGKITIRVTETEKRILLSISDNGKGIDYEQLEMIHRDLQ ADTSASGSERTTGIALSNIHRRIQLLFGDSFGIALESTPMVGTTVHITMPKQAYQEENK >gi|224461043|gb|GG657761.1| GENE 170 201095 - 202690 1200 531 aa, chain - ## HITS:1 COG:BS_yesN KEGG:ns NR:ns ## COG: BS_yesN COG4753 # Protein_GI_number: 16077763 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus subtilis # 1 123 1 123 368 117 45.0 7e-26 MYKILVVDDEFRVCKMLEKFINKSGLDLQVIASVNNGKDAFEIISKESPDIVVTDIRMPI FDGIELVKRVRAAGNNCDFIFISGYREFEYAHSAISYGVRHYLLKPINKQDFLNSLTKII QSLDCAENAGGSSDKPHNVLPSATLGIRHSLLKALCRNDGITLTSIEECNRRFLYAFREG RFQVFTGVLDSGNERTDYLSSTLAGAMDNIIHILNKFYAGRLFEKEYYIEDRLLFWLINY DPQNTDLENSVAHVFGEINQMLDRQGDLRFSLAVSPPAKCIQELPGAAALAADALKCRIR IGNGRIIFADTLSYPDAPLAPMQAETVIKYLEADDMEALLTAFGRLLEQSRRQTLHPKYK IDILLTLYKTLEDYVSKYSYLNEVNTDALYKVILTAKTEQSMDSAFMDTLSGLLSHIVSA KQNVDMLPIKNAKEYISAHIDKPLTLLDVADHVHLTPNYFSTLFKNETGSNYLDYLIALR IEKAKELLLTELPLSEVCKRVGYPDVKYFSKIFKKKVGLKPLDYKKFHHSL >gi|224461043|gb|GG657761.1| GENE 171 202955 - 203245 293 96 aa, chain + ## HITS:1 COG:no KEGG:Cphy_0210 NR:ns ## KEGG: Cphy_0210 # Name: not_defined # Def: sporulation transcriptional regulator SpoIIID # Organism: C.phytofermentans # Pathway: not_defined # 5 81 12 88 96 113 79.0 2e-24 MKDYIQERAVEIAYYIIEHQATVRQTAKQFGVSKSTIHKDVTERLLQINPALANQARKVL DMNKSERHIRGGMATREKYLHSRHDEGQCVHSESMV >gi|224461043|gb|GG657761.1| GENE 172 203296 - 204537 1336 413 aa, chain + ## HITS:1 COG:SMb21595 KEGG:ns NR:ns ## COG: SMb21595 COG1653 # Protein_GI_number: 16264783 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 48 408 34 408 410 133 27.0 6e-31 MKRTGKPASVILVCLLLAALAAGSITGCKKEEKAEAEKKREIVLWHYWDLPQQRRTLEDL VYDFNHSQEAIRVKTRYIPDADFKKELALGMADNKTPDIALVDSVDFRYFNSMQPFVDLT DEIGELGQYLPAAVQPCTVEGRVLGLPSGLNCTGLFYNAALFEAAGLSVPGTWEEFYEAA RILTTDDICGYAQIALQGEESLYAFLPILWSMGGDVDAIDSPESRQAFELLGTMARSGCL GKESISLTGSDLAGQFADGKVAMMFNGIMMADYIREQNNALDFGVTYLPADKDRVSVVGG EIFGVMSGDNEAASIEFLKYISEKDRLASYIDGLGLLAPRQDVMDGQFADDVLMRQCVDI FQTARMREISTEWPRVSAVAADAIDEVIVGGRSVDETLKEAAGAIRDIREGVR >gi|224461043|gb|GG657761.1| GENE 173 204534 - 206255 1704 573 aa, chain + ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 286 570 314 596 602 152 32.0 2e-36 MKRERTLRQKLTPFFILAVAVPIVIFACLSMYRLEQSMRASLDRQIDGNLNKADQCLDMV LDKYGTLLYDLCTDDEVISLVEEINRDQDGLEVNSNYLRRRLSHICNRNDGIEGITIITA EGRAIYYDHLSASSVSSSWAADVAPPLITHGAVYEGMTEPVSSGGDEVYMLRIARRLVNY EDIHKETGTVVMSINESLLTEALDAWDVAENYLLCDNVVISARDNKDIGKTAEDIRRDGY EYTSAVNETTGFTIYNRQSLKAYHDTLYEQGGFWLLITAALAGGVFVLGYVLTRPYLKEI DTIAAAMNEVEQGNFQTEVAVNEKMPVEIRKISSGFNEMVQHIEMLIEQVKAAILEQKNA ELSALEAQIDPHFLYNTLDTINWKAIERGEFEISEMVGALADILRYTVKNAGGETSIEQE LYWLRQYIILQSTKEGKEIRVTLDVPDELRGCRIHKLLLQPFVENAVKHGMKHREGECKI DISMRSTDRQIHIMIMDNGNGMTASTLAKLNSGAFERDKEYLSSHLGIANVRKRLRLYYG EQADIYFESRLDKYTKVHLFIPAVAALEGGTHI >gi|224461043|gb|GG657761.1| GENE 174 206252 - 207772 1805 506 aa, chain + ## HITS:1 COG:BH2109 KEGG:ns NR:ns ## COG: BH2109 COG4753 # Protein_GI_number: 15614672 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 2 142 3 147 525 100 38.0 1e-20 MRIVVVEDEAPIRNGMSRLLQKINSEYELAGTADNGLQGLELIERVKPDLVILDIHMPDM DGLTMLAKVREKGISCKAIVLSAYSDFSYAKIAIELGIENYLLKPIKIPELKRALEQVEK TIIEEQSKEEFFTLENIFYRSVTGQFISDRQTDITLEKHFRIMPDEEIVVFLVKLSGCYP VYHDTVRSLLEETGIHNGTFSSCLLEFEDKEGIIMLLYKMDDQDELRQYFQKAVMPMLCG QVKGSFAAVWRACEGLAGVNPALENMREDLEWNLVLGREVLISRERIGQAEAVPVKYPVE IETQARQAIVSNHREEFDACTKRLREYFLADVHFPKEIKEACIRYCMAIYHTAKEAGKVS EDTSAQDIMNLITQAYTWEQIGKAYGLFYKSLRFQREEEATSLMVQRAGQLMQEYYNQGI TLEEIARKLCVSEEYLSAQFKKETGKTFTETIRGYRIEKVKELLLQTTLKLNQIADLAGY TDPKYMSKVFKDEVGVTPAEYRKLNN >gi|224461043|gb|GG657761.1| GENE 175 207966 - 208196 233 76 aa, chain + ## HITS:1 COG:no KEGG:Calhy_1445 NR:ns ## KEGG: Calhy_1445 # Name: not_defined # Def: phosphotransferase system, phosphocarrier protein HPr # Organism: C.hydrothermalis # Pathway: not_defined # 1 74 1 74 76 70 44.0 2e-11 MSRKTVVFQRPDDVLDFVNKVGKYPFDMDMKRGRFIVDAKSILGLMNLGLKNKIELQVYH DSCDELWQDIEKYIAA >gi|224461043|gb|GG657761.1| GENE 176 208324 - 209685 1632 453 aa, chain + ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 17 447 92 527 547 183 28.0 6e-46 MKNEVKTDRSGYLFDNKALLALIIPLIIEQLLAVLVGMADSIMIASVGEAAVSGVSLVDQ IMVLLINLFGALATGGAVVAGQYLGQKNQKQACRAATQLVWFITVSAVVITVIVYACKFF ILHGVFGRIEQDVMGHANTYLMIVTASIPFMALYNGGAAIFRAMGNSKVSMQVSIVMNII NVAGNALLIYGFHRGTEGVAIPTLVSRMVAAVLIIALLVNQTRTLHIEKTLRYRPDWRLV KKILSIGIPNGLENSMFQLGKILVLSLVSTFGTYAIAANAVSNAVALFQILPGMAMTLAA TTVIARCVGAGDYEQVRYYNKKLIMITHICMVVTVGAIFLILPFILKAYHLSDLTAGVTK QILYFHGISAILIWPVSFILPATFRASGDAKACMYISILSMWIFRIIFSYILGKYMGLGV FGIWVAMVIDWIFRVICFAIRYFRGSWKKKAIV >gi|224461043|gb|GG657761.1| GENE 177 209772 - 211319 1747 515 aa, chain + ## HITS:1 COG:CAC2700_2 KEGG:ns NR:ns ## COG: CAC2700_2 COG0519 # Protein_GI_number: 15895957 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Clostridium acetobutylicum # 196 515 1 316 316 435 67.0 1e-122 MKRELVIVIDFGGQYNQLVARRVRECNVYCEIYSYKTDIEKIKELNPMGIILTGGPNSCY MPDSPTYSRELFELGIPVLGLCYGAQLMMHVLGGKVESADVREYGKTEVLIDKKTSRIFD QVSSPTICWMSHFDYISRTAPRFEITAHTADCPVAAAEDEAKKLYAIQYHPEVLHTVEGT KMLSNFVHNVCGCAGDWRMDSFVEESIRSIREKVGSGKVLCALSGGVDSSVAAVMLSKAI GSQLTCVFVDHGLLRKNEGDEVEAVFGPEGHYDLNFIRVNAQERFYERLAGVSEPEDKRK IIGEEFIRVFEEEARKIGAVDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFK EIIEPLRDLFKDEVRKAGLEMGIPEYLVFRQPFPGPGLGIRIVGEVTAEKVKMVQDADAI YREEIASAGLDKGIGQYFAALTNMRSVGVMGDERTYDYAVALRAVNTIDFMTAEAAEIPW SVLQKVTSRIINEVDHVNRVMYDITSKPPGTIEFE >gi|224461043|gb|GG657761.1| GENE 178 212543 - 213373 280 276 aa, chain + ## HITS:1 COG:no KEGG:PA14_49030 NR:ns ## KEGG: PA14_49030 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_PA14 # Pathway: not_defined # 2 259 66 323 343 265 51.0 1e-69 MNLKDAVKVAFTGRPQPIEAIECPIHIKNPNLYIIPGHMDLSEYESSLSLALNSNNAIVT LQNLPGSFYELIKKCCEKYGIDYVFIDMNPGLSAINQTFFSYADAFIVPANPDPFSTMAL KTLKQTLPKWKRWALQAKEMFKDSAYPLPECEMKFIGEIIQRFNLRNHKAAKPYTGKITE IKTYIETEFVRELEKYDMVYDISSLIQAGVLTDRCLGEIPEFGALIQKANEAMLPVFDLS KEDMGTVGNVYDSMEEKRELFNDMYKKIVKVIMELV >gi|224461043|gb|GG657761.1| GENE 179 213373 - 213978 243 201 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571446|ref|ZP_03780442.1| ## NR: gi|225571446|ref|ZP_03780442.1| hypothetical protein CLOHYLEM_07544 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07544 [Clostridium hylemonae DSM 15053] # 1 201 1 201 201 395 100.0 1e-109 MLIAYKRFTDLVNNTQNVGVLYEYIENTMKAPVDTSDLLRWQWIQCISVFDKFVHDIVRI GMVEIFQGNRISTPKFNDFQIDYQTYENIINNPLIASTVFEQRVILKHSFLAFQDPVKVA DALSYIWNENDKWGKISGLICMNKKDCVTFLKNAVIRRNQIVHESDYTDALSRRQDIYAQ DVVDIRNYTLKVGGAIYNCVK >gi|224461043|gb|GG657761.1| GENE 180 213996 - 214082 60 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIARIIDNNAMITLVRIVHRNKTVGEK >gi|224461043|gb|GG657761.1| GENE 181 214164 - 214241 68 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIYFIWQVVYKVACYICVVSKYRYY >gi|224461043|gb|GG657761.1| GENE 182 214285 - 215235 390 316 aa, chain + ## HITS:1 COG:no KEGG:Ssed_0897 NR:ns ## KEGG: Ssed_0897 # Name: not_defined # Def: hypothetical protein # Organism: S.sediminis # Pathway: not_defined # 5 300 4 292 334 160 36.0 5e-38 MENIKYQVFISSTYSDLMNERKQVLDILLMADCIPAGMENFVATDDEQFNVIKKVIDLCD YYVLILGRRYGSVNETTGISYTEMEYNYAIDKGIPVLVFVLDDSVEIDNEKKEKDDIKRG KLAEFKSKAMRNRLASIWRDQSELMGKVAIAIMQAKNEIKRPGWHRGNDVERERLLKEID LLRKENEDLRKGVELHDNKPIDFNGIFYGKEITLHYTERVYVFTKDTVIHEKNVVTTLDK LYQFVSLRITGIKKLSEFQEAVSGFVSGYYVDTQDALIVRNKYEQLGLINSFVGKDNIEM IEMTDLGKDIMNKLNQ >gi|224461043|gb|GG657761.1| GENE 183 215396 - 215479 57 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNCLEWQVVYEIACHIYNLYIAKYYIF >gi|224461043|gb|GG657761.1| GENE 184 216024 - 216116 100 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALFGKTAAQWRNEKGISVKIANIRDFASA >gi|224461043|gb|GG657761.1| GENE 185 217005 - 217736 378 243 aa, chain + ## HITS:1 COG:no KEGG:CAR_c11050 NR:ns ## KEGG: CAR_c11050 # Name: not_defined # Def: hypothetical protein # Organism: Carnobacterium_17-4 # Pathway: not_defined # 4 242 106 344 345 249 52.0 1e-64 MDDESFGYQKARQDLREEDLKRYGIQTVFIDDYSEITEILRELESAVLANNIFISGSADF FEGVWEKTKVEELAYKLANQLVKEEFRITSGFGLGIGSAVINGALDEIYSSRYKHISEHL CLRPFPQGIVDAEECKSKWKKYRENIIKENGVVIFMLGNKKADGKKSIADGCLQEYEIAK KNKCVIIPIGSTGDAAEIIYHEMKENKADFPYLEKYLDILGTETDIDKILGAVTEILKAK RIV >gi|224461043|gb|GG657761.1| GENE 186 218129 - 218740 280 203 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2807 NR:ns ## KEGG: Cbei_2807 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 203 1 202 202 253 67.0 3e-66 MAHKTFISYKYDEAQRLRDDIIEALDDDATYYKGETSDSPDLTDTSTENIKKNLRDMMYD TSVTIVIISPNMKNSKWIDWEIEYCLKDNTRKGRTSHTNGVVGVIMKYNSGYSWFKSTHI NDDGCSSTTYEESKVYDIINNNRFNQNPKKYSCDVCKTVNALTGSYIAYVDEETFLSNPT KYINNAYDKSENDAEGYDLTKKR >gi|224461043|gb|GG657761.1| GENE 187 220052 - 221185 597 377 aa, chain + ## HITS:1 COG:NMA1500 KEGG:ns NR:ns ## COG: NMA1500 COG0270 # Protein_GI_number: 15794400 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 56 373 3 331 337 183 38.0 4e-46 MNRVKEIRKERGMSQETLARYIEISRKYLSMIECQNATPSISIAMRIGGALGVSVDKIFL DLSSVETIAYPKPIRYIDLFCGIGGFRYASQYAFDKLDLEGKCVFSSDIDKYAQVSYEAN FGERPMGDITKIEASEIPDFDILFGGFPCQAFSICGLQKGFADNTKGTLFFDIARIIKEK QPQAFVLENVKNLASHDNGKTLKTILEVLRDELGYHVDYKLLNALDFGLPQKRERIIIIG SKKPFLMDWTFNVEKKKTLDDILEKDIDKKHYASPEIVAKRKAKHTASIYPSIWHENKSG NISSYPYSCALRAGASYNYLLVNGERRLSPREMLRLQGFPDSFKMVVSDTQTRKQAGNAI PVDMVAKVIERFLPLAF >gi|224461043|gb|GG657761.1| GENE 188 221265 - 222017 181 250 aa, chain + ## HITS:1 COG:no KEGG:lpp1079 NR:ns ## KEGG: lpp1079 # Name: not_defined # Def: hypothetical protein # Organism: L.pneumophila_Paris # Pathway: not_defined # 2 244 3 244 247 218 46.0 3e-55 MREPRLRTVNKAVAPFDLNKFPAKFIDTLAKEIVYMIATKSSMSLEGNEWEQIFAECVGA EWKPSNVGLDDVVLDNCCWGAKTVFGSTNIEKQQTVRLISGRNSPTYSYGVDSITSEDPN EIGRLVLDIWNERVSAVRQVFKFVRTVVLVKSKDYKDFLVFEFDTIRYDPELYHFEWNMR MNLEGYEKSTGKHKFTWQPSGSQFTIIEDIPDKRLHISVRKPEKVDKETILRAVNFDSSW YQVVSDHIER >gi|224461043|gb|GG657761.1| GENE 189 222022 - 222438 153 138 aa, chain + ## HITS:1 COG:CC3624 KEGG:ns NR:ns ## COG: CC3624 COG3727 # Protein_GI_number: 16127854 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Caulobacter vibrioides # 1 122 1 123 151 90 38.0 7e-19 MTDVFDDKKRSEIMSKVRSKNNKSTELKLIQIFKENGIGGWKRNYPVKGHPDFIFLDKKI AIFVDGCFWHGHDCRNTRPSNNADYWTKKRERNMKHDKEITESFERRGWTVIRIWECELK KKNRENLILRLKNELGDI >gi|224461043|gb|GG657761.1| GENE 190 222440 - 222544 83 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKREFKPKEKYYLDIKAKYMQGQQFGRKISEYK >gi|224461043|gb|GG657761.1| GENE 191 222595 - 222678 65 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYLLYKINYILTYYSSSANWTILLNI >gi|224461043|gb|GG657761.1| GENE 192 223183 - 224358 438 391 aa, chain + ## HITS:1 COG:no KEGG:BAA_3824 NR:ns ## KEGG: BAA_3824 # Name: not_defined # Def: hypothetical protein # Organism: B.anthracis_A0248 # Pathway: not_defined # 1 386 1 375 379 279 41.0 1e-73 MGKELKIKVESFRKIPNPYATKDEGVKDAMMYIAICDVKEIPKDIPMETNPREQKLTTGI PKKIKASLLGEDYLDFYLLNRGLCISASEVSYNNYNNEMTVSFEDFECHGDIDGGHTYKI ILENQDKLDAGKQFVKLEILTGVEGIFQRLAAARNTSTQVQDKSIAELENRFDIIKKAIS RETYSTDIFFKENEEGNIDVADILAILNMFNIDIYSDMDKYPTSSYSSKKKCIDLYIKAH KEYGEDFPNPYIKMAPLMKDIFKLYDHIEINMAKYYKEKNPTGKYGSVKGVTLAKNGCPF RSKFYHKDMDYSTPTGFLYPILGAFRALIKEEDGVYEWRKNPFIVIDDLGPELVETTIER SRSLGNNPQSVGKDSGNWKTLYMIVKLGLIE >gi|224461043|gb|GG657761.1| GENE 193 224446 - 225639 1106 397 aa, chain - ## HITS:1 COG:no KEGG:BCE_1989 NR:ns ## KEGG: BCE_1989 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 153 397 37 261 261 95 31.0 5e-18 METNKKTARYFSKPLMGQTIKSNWTLCLAILFIMILLSNVVNYAMSMMATEKSDVDVTEY QESFYTYLGALATYNTAAQQDLSYDDFSSGGNEAAYETAFQMLNAQSDMNLSTEGFQEAI DGLSQSDISLDKYVKQFEYVYALNQSKGVFDKEELTVSGMLTITLDMMGVSSEMVEKMSE MNPASMMNHMYYTAMGLLPIFILIVILSNSLIANQVDRGSMAYVLSTPTRRSAVAITQMV FMLVVPLLMIAIVCATRIGTTFLFYDEVNVPGILALFGGMYILIEAVCGLCYMGSCLFSQ SKKAMAFGGGLAVWFFLASMIGMFGSENMVNTGMGVEELSVFNKLTLVGLYDVDSLATVG TGSVDTAFVWKLLVLAAVAAVCYAVGAVRFAKKDLPL >gi|224461043|gb|GG657761.1| GENE 194 225626 - 226540 996 304 aa, chain - ## HITS:1 COG:BH1003 KEGG:ns NR:ns ## COG: BH1003 COG1131 # Protein_GI_number: 15613566 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 5 301 3 296 305 208 37.0 1e-53 MNDVIIKTNGLTKDYGKGRGIFDIDLEIRRGEVFGFVGTNGSGKTTTIRNMMGFIRPDSG TFAVNGLDSWSRSADIMKNVSYIPGEIAFPALKTGTEFLKTQAKYLGVTDFKYMNHIIEL LQLDPTANLKRMSKGMKQKTAIVAALMGEKEVLVLDEPTTGLDPLMREAFLELIREEKQK GHTIFMSSHIFEEIEAVCDRVSMIKNGHIIDTTSLYNLRHPTTKNFIIEFEQPAQQQKFV EAAPFPAAATDANTCSVQCSVEQLDLLFNTLKNYQIAYLREIHLSLQQQFMRAYKEGLTQ NGNK >gi|224461043|gb|GG657761.1| GENE 195 226540 - 227451 700 303 aa, chain - ## HITS:1 COG:TM1028 KEGG:ns NR:ns ## COG: TM1028 COG1131 # Protein_GI_number: 15643786 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Thermotoga maritima # 1 295 1 290 293 213 40.0 4e-55 MSVIEVSKLTKDYGHGRGVFDVSAHVDEGECLGFLGPNGAGKSTTIRHLMGFSKPQSGTT SIEGKNCWECSAELQRDVGYLPGEIAFPSGMTGTQFLNMQKKMRGVTDTSYLEMLLKKFE LNPDIGLKQMSLGTRRKLAVVTAFMHDPKILILDEPTSGLDPIMQEIFIEYILEEKKRGK TIFLSSHIFHEVDASCDRIAIIRDGRIVSEFDPEVLKKESDKIYRVTFHDKKQWQEFTSH TYHFTSINERKLRARIQLKNSEITSFLADISRYHIIDFTEFPFSLEDYFMQFYHEDKIFE GVK >gi|224461043|gb|GG657761.1| GENE 196 227605 - 228198 546 197 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2877 NR:ns ## KEGG: Cbei_2877 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: C.beijerinckii # Pathway: not_defined # 1 193 1 186 187 117 36.0 2e-25 MKKQPEVTAATRQKIMDAFWTLYKEKAVDKISVSEITAITGNNRGTFYRYFKDVYAVLEQ IEADLLRDVGREVHNILSSHIFEDHLRDINLLYTMTIPIFKKHEEKIFTLLGKNGDPKFT SEFRKSIQSMLIKFWNFSDDTEHLDYLLEYTYSAMFGLMAKWYENGNDLTEDEFFKMAQG LVANGVLGHCKHLPAQA >gi|224461043|gb|GG657761.1| GENE 197 228255 - 230225 1174 656 aa, chain + ## HITS:1 COG:BS_yyaL KEGG:ns NR:ns ## COG: BS_yyaL COG1331 # Protein_GI_number: 16081134 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Highly conserved protein containing a thioredoxin domain # Organism: Bacillus subtilis # 3 651 8 677 689 599 45.0 1e-171 MSNHLKNESSPYLLQHSENPVDWYPWCEEAFERAGREDKPIFLSIGYSTCHWCHVMAHES FEDKRTADILNENFISIKVDREERPDIDSVYMSVCQALTGSGGWPMSIFMTAEQKPFYAA TYIPPDNRYGMKGFRELLLEISGHWKYKKSELLESAEQILDHIDTKEERAKKKTLKRVGA GTDTTLPERAAELFAQAFDEKYGGFGAAPKFPTPHNLLFLMIYSSLQDAGMSYEAEKTLE QMRRGGIFDHIGYGFSRYSTDRFYLVPHFEKMLYDNALLMIAYSAAYKVSGKTMFLETAE KTAEYILREMTGPDGEFYSAQDADSEGREGLYYVWDEEEICGILGAERGTEFCRYYGITE EGNFEGKNIPNELDGKEITDRFHKERELLYDYRKRRARLHLDDKVLTSWNSLMISAMAVL YRVTGKERYLEAAERARRFIEHNLADGNTLRVSCRGGSGSVKGFLDDYAYYTAALLSLYE AVSDVDHLTRAEQICREARQQFADEEGGGFFLYGSRNDSLITRPKETYDGALPSGNSTMA YDLVRLYQITGNEEYKDAAKRQLAFMSGEAQEYPAGYSMFLTALLLYENPPQKITVVLAD GDNKEEIMSRLPLYAEINILSGETREYKLLNGRTTYYVCKNYTCLPPSNELMSDSK >gi|224461043|gb|GG657761.1| GENE 198 230600 - 231712 1243 370 aa, chain + ## HITS:1 COG:AGc4267 KEGG:ns NR:ns ## COG: AGc4267 COG4213 # Protein_GI_number: 15889625 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 21 370 8 354 354 322 49.0 9e-88 MKKIYKKVTAVLIVLTMMFSLAACTSGDSGSGGSSSGGSKKDNKKVGIAMPTKDLQRWSE DGAYMKEAMEKAGYTVDIQYANNDIGVQASQIENMITGGCGTLVIASIDGGALSEVLEKA KAADIAVIAYDRLIMNTDAVTYYATFDNEKIGIMQGQYIADKLDLENQAGPFNIELFTGP TDDNNVNFYFGGAMSVLQKYIDEGKLVIKSGTEVSLAACATPNWSTEEAQKRMENIITKS YTGGEKLDAVLSSNDSVANGITNALVAAGYTAEDFPIITGQDCEITSVRNMIKGLQAMSV FVDTRELANVTADMVEAIMKGEEPEINNTEDYDNGTGIIPTYLCEPQVADIDNYKEVLID SGYYTEDRLK >gi|224461043|gb|GG657761.1| GENE 199 231803 - 233320 1889 505 aa, chain + ## HITS:1 COG:BH3441 KEGG:ns NR:ns ## COG: BH3441 COG1129 # Protein_GI_number: 15616003 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Bacillus halodurans # 1 502 10 510 517 631 62.0 0 MKGITKTFPGVKALDNVNLQVEEGEIHALVGENGAGKSTLMNILSGVYPFGSYEGDIFYE GERCEFQKIKDSEKKGIVIIHQELALVPYMTIGENMFLGNERGSRYNVNWNDTFSQSEEL LKTVGLSEAPQTLVKDIGVGKQQLVEIAKALAKDVRLLILDEPTASLNESDSKKLLNLLL TLKKQGMTSIIISHKLNEIAYVADKITVLRDGMTIETLENKEHIIDEDRIIRGMVGRELT NRFPPREHASIGDVSLDIRNWTVHHPLAPERKVVDNVSMYVRRGEVVGISGLMGAGRTEF AMSVFGKSYGVNISGEMTLGGKKVKLNSVQQAIDSKLAYITEDRKGNGLILSNPIRVNTT LAKMDKVSRFGVIDKNKEYEVAEDYREKLRTKTPTVEQNVGNLSGGNQQKVLLGKWMFTE PDIMILDEPTRGIDVGAKYEIYSIINSLAEEGKSIIMISSELPEILGMCDRIYIMNQGKF VGELDRAEATQEKIMTLILKQGREQ >gi|224461043|gb|GG657761.1| GENE 200 233338 - 234489 1393 383 aa, chain + ## HITS:1 COG:SMb20893 KEGG:ns NR:ns ## COG: SMb20893 COG4214 # Protein_GI_number: 16264935 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, permease component # Organism: Sinorhizobium meliloti # 3 383 13 403 404 298 48.0 1e-80 MNSVKDVLKKNTMLFILLIVALFFGWKTNGVLFDPQNVTNLIAQNGHVVILAVGMLLCIL TGGNIDLSVGSVVAFIGAVAGKLMVTYKMNFGLVIVICLVLGILIGMWQGFWIAYIRIPS FIVTLAGMLLWRGVALIILDGLTISPFPDDFKMIFNSYIANPFGGSINLMCLLAAVLACL AYIFVVVNSRRNRQRKGYAVEKLAPSVGKTAVICLVILLAAYRMAQFQGLPTILVILAVV VGVYTYYTSKTVGGRYLYAVGGNEKAAKMSGVNTNRVLFFAFTNMAFLSAVAALVCVARF NSAAPTAGKNYEMDAIASCYIGGASAYGGTGTVMGAVIGAVFMGLLNNGMSIMGVDSNWQ QAIKGLVLLAAVAFDVISKKKSR >gi|224461043|gb|GG657761.1| GENE 201 234504 - 235397 1125 297 aa, chain + ## HITS:1 COG:STM0684 KEGG:ns NR:ns ## COG: STM0684 COG0363 # Protein_GI_number: 16764054 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Salmonella typhimurium LT2 # 33 278 9 243 266 81 27.0 2e-15 MDLKKLYEWCSIPAEELPGRTDLKVPFRIVKDSHELGSVMARDLVEEIRKANEEQRSFRL IVPCGPKEWYGPFTEMVNAGNVSLRNMVCYHMDENLDWEGKLLPKEDPNNFRTFMERYFY GGIKEELQVLPENRHFLTPYNMQEMSEMIAGTEIDYTLGGWGQDGHVAFNQANRNPYVEV SLDDLRGSTARIQNNNNDTILALAQRGLGGAWQFMPPMSITLGVKECMKAKKIRVYSATG AWKQTALRVALFSEPTVEYPMTLLQEHPDALITATEETAAHPISEHPEWEFRRVNSK >gi|224461043|gb|GG657761.1| GENE 202 235416 - 236447 882 343 aa, chain + ## HITS:1 COG:YPO3621 KEGG:ns NR:ns ## COG: YPO3621 COG0524 # Protein_GI_number: 16123763 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Yersinia pestis # 66 285 59 271 310 70 24.0 7e-12 MTYDKIIATGGIGTGMLFLSGQQETLGRSESRSVTLSPAKDYCKQQIVLYYTAALLRETI PVYPIGCVGNDSMGDSILEEMRRQGMDVTYISQSPDVPTTISVCLQYPDRETCNFTADNS ASGLVTPEYILRAMEDIGVDEKSIVCAVPEIPVDSRAAMMKEAKRRGALTVLSVPVSEAE EFAQRSIYRYVDILAVNMEEAQAAAGSRSEGRELLLELSKLLCSLNPHLAILMTCGKDGA YTFAGQTAEKVPPLLCSALNTTGAGDAFLGGTLAGLARGMKLQKGCEDRNFGESELKSAP ELGTICAGMAVECEDSIAFHVGPETIREMIQNRGWKADARFAG >gi|224461043|gb|GG657761.1| GENE 203 236485 - 237540 340 351 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 1 340 1 334 345 135 27 2e-30 MKDIKVESFGKLAGGQEAFLYTMTNKNGMRIKVTDFGAAAEAVLLPQRSGKHRDVLLGFD SAAGYENTGLYLGATIGRYAGQIRGGSFWLNGEQYHLPVNDHENTLHGGARGFDKHCFTA VPDEENNRVAFHAFIEDGEEGFPGNLEVESSYELTDDDEIIMVHTARTDKDTVLNMTNHS YYNLDGHTGGSIEDHRLKIYSDQFLELAGDCCPNGNVLAAAGTPMDFHDMTRIGERIGQP YPQLIISGGYDHNWNITGPAGRLKKVAELESSRGDVRMEMFSDLPGLQFYSGNYLDGSEK GKEGCAYNFRGGLCLEPQYYPAAPNYRQFPPAVLRKNETYRHTIKVKFTYD >gi|224461043|gb|GG657761.1| GENE 204 237611 - 238765 897 384 aa, chain + ## HITS:1 COG:BH1094 KEGG:ns NR:ns ## COG: BH1094 COG1940 # Protein_GI_number: 15613657 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus halodurans # 1 379 1 399 407 147 27.0 4e-35 MKKGGKPEDLGEANRMLILNCLRLYGCMSKADLARRLGMSFPAISANVKILIEQGHVRES GEGDNSLGRKSMLLSFNEEMGFVIGVDIGRFWIRVMVADLMGKVLGYVKAPAVSGGEAEE LYDAVVDVIRQALIKSGKTEKEILCIGIGMPGVIRDDTILLAPYFPSVELKKFKQRIKDE FDTELILENSVNMGAIGEQAEGAGKGYDNFIVINYGVGVGSALVLNRKIYSGSHNAAGEI GYMVAEPMKLRDSFDEVGVLESIISKEKIEKFISHDNFQKEVELLVEKYRANDLYVRSVL DEISINIGVTLINLCAALDLEAVIISGGLGTAFGNIFIDTWRSMLGNHIPFPPDILLSEL DNKEGVLGAIHKSIEHLFSADTII >gi|224461043|gb|GG657761.1| GENE 205 238762 - 239418 459 218 aa, chain - ## HITS:1 COG:no KEGG:Closa_2883 NR:ns ## KEGG: Closa_2883 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 216 1 216 219 219 50.0 9e-56 MQTIYNKTLKDTLYYNDIAVFTYKIDYPFFLTACGTSAAHGINRHYEAKAEKLEHYCRTA LYEEAVESARYIQKNFPPFHSYELLEVYTVTYNDSGITSLYTDQYTYMGGAHGATVRTAD TWNFSSGRPMALREFYPDTPDFRESVISCIEEQTKQRLEDAPSTYFDNYPELIRSNFHPE NYYMNADGIVIFFQQYDIAPYSSGIPEFELHFQDSSAC >gi|224461043|gb|GG657761.1| GENE 206 239561 - 240085 540 174 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_2745 NR:ns ## KEGG: EUBREC_2745 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 167 2 166 173 158 46.0 9e-38 MEKVVIIINGNGGVGKDTLCELAAEAFKVTNISSITPIKDIAARYGWNGEKDARSRKFLA DLKKVFTEYNDLPTNYLVEEYRKFLESDSELLFVHIREGQEIDKFRRQVNTPCAALLIRR DHLKGRSWGNEADDNVAGYAYDFRYDNDRPLAQAGPDFIRFLRDMLDTVLKKDR >gi|224461043|gb|GG657761.1| GENE 207 240260 - 241102 819 280 aa, chain + ## HITS:1 COG:no KEGG:Blon_1002 NR:ns ## KEGG: Blon_1002 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 13 277 3 266 268 165 37.0 2e-39 MKNIESARRRFRKAVIVLCSISAACVMTGCSAVSGMIDQVTGTKEECRIHEKDVTEFTYK GKVYTILQDTVSEKELGTWVGCIRKLAVLDRENNLITEVDAVNSPVKDLAKVSEDNPEAA YTLSYGNVYLDKQDGGDRLIVGIDGTWHKAVAKELLQEKDIVFQVREYNPAEDTVSIASG NCTEIIYGTVVYQITEEVIPGEKVDTYLGMLAKNIVFDETTKRPLSRAELSRIDWTGKET AGQKRVEWFFGDVCAVSGTDTEEAVAVEINSEYRLAKAVR >gi|224461043|gb|GG657761.1| GENE 208 241271 - 241687 449 138 aa, chain + ## HITS:1 COG:no KEGG:Closa_3192 NR:ns ## KEGG: Closa_3192 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 137 1 138 139 124 50.0 1e-27 MDKVSVTVSVYFEEPFWVGVVERVTEEGLTACKVTFGAEPRSYEVYAFFLENYYRLRFSP AVEAAVRKTHVNPKRMQRKVHEQMEDKGPGTRSQQALKLQHEQMKTERKVLTKEQKEADK LRKFELKQQKKKEKHRGR >gi|224461043|gb|GG657761.1| GENE 209 241812 - 242180 382 122 aa, chain + ## HITS:1 COG:CAC2476 KEGG:ns NR:ns ## COG: CAC2476 COG3070 # Protein_GI_number: 15895741 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Clostridium acetobutylicum # 1 98 1 98 114 124 60.0 4e-29 MASSREFVEYVADQLLGAGEITYRKMFGEYGMYCDGKIVALICQDQLFIKITEAGRNAWP GLEEAPPYEGAKPYFLIEELDERERLCTLVKETYRELPAPGPKKKRAERKKNGKEKDGKA GL >gi|224461043|gb|GG657761.1| GENE 210 242146 - 242808 576 220 aa, chain + ## HITS:1 COG:lin2189 KEGG:ns NR:ns ## COG: lin2189 COG4832 # Protein_GI_number: 16801254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 8 217 5 207 208 207 48.0 1e-53 MEKKKTAKLDYKKEYKDLYLPGTKPVIIDVPEMVFIQVEGEGDPNTSAAYKNAMEVLYGL SFGIKMSKMSGSQPDGYFEYVVPPLEGLWWMEGGAYIGTEKLAGLKDQFRWISMIRQPEF VTPDVFAWAKDTLKKKKPDIDLSRTKLVTYTEGLCCQVMHIGPYDDEPASVRKLEQFVED NGYRCDIGEERRHHEIYLGDPRRTKPERLRTVIRHPVKKF >gi|224461043|gb|GG657761.1| GENE 211 242960 - 244798 2201 612 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 179 599 337 754 776 189 28.0 1e-47 MGLPLVVVIILVMSFVSARSMSDMENYSRLINYVGIVRGASQRVIKLETNNRPDDALIDY VSGIMEELLSGEGEYGLKRTVYKEFNDDLEKLGSRWDLIKEEISDVREGAGTEKLLNSSE ELFDIANDTVFTIEEYSGMRSAALARQLIITGVLCFLISLFVIIYYVREYFKLSRKTEKL ADMAGRDKLTGALTTERFYEEAQKAIDREPDARIAVLYIDFENFKYVNDVFGYEVGDAIL QKYVEVVKASLRNGELLSRTMADRFVLLRYYEDKQRLLEEQQELDRRFVNLDVLPDKHSI TVACGFCCREDVIEQLDIHGLINRANYAQKTIKSRPDEHYAFYNDSIRQKLFREVYLTDR MQEGLDNREFRVYLQPKVSPYDGMIKGAEALIRWITTDGKFITPGEFVPLFEKNHSIKKL DTYVFENVCRLMQEWHEKGQTVVPVSVNVSKLTFYTADFIKEYREIKERYGIPDHMLEIE FTETVACENEKYMTQIVKELHENGFLCSMDDFGTGYSSLGMLKNLDIDILKLDALFFRES KDLKKEQIIVKEVLHMICQLNIKAVAEGIETDSQVAFLKECGCDFIQGYYYYRPMPAEEF EAELKRQYGQKR >gi|224461043|gb|GG657761.1| GENE 212 244920 - 246005 1027 361 aa, chain + ## HITS:1 COG:CAC3472_1 KEGG:ns NR:ns ## COG: CAC3472_1 COG1396 # Protein_GI_number: 15896711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 5 113 3 111 125 91 42.0 3e-18 MKQQLGKTIQQMRKVQGCTQEQMAETLGVSVAAVSKWENGVSCPDITLLPALARYLKTDL NALLSFHEKISEQEAAAVVNEMSEIFFRSGFEAAYEFIMEKIREYPGSDILLLNGAMALS GALAMGKDPEEAQLYKDRIEQLYERAARSEDTAVRDQARYMLASGCMARGEYGRAKELLD GLPEEQTFDKRQMQVNLCLARNELTKAAQIEERKLMQAAVSLSMVFSVLIEIAVREGREE DARYLAEAAGKAAEALDMWEYTAGIPWLELYVHRKDRDNCLEILEKMLTSAAGQWDHTSS PLYRHVKKKEGEDRLGARMRETLIAAVESDEQYAFLHNTEAWERIKTAGYGADRSSKADE T >gi|224461043|gb|GG657761.1| GENE 213 245995 - 246654 632 219 aa, chain + ## HITS:1 COG:no KEGG:Closa_1597 NR:ns ## KEGG: Closa_1597 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 213 1 215 218 255 56.0 1e-66 MKRNVDLKDISDGRLYTANDMVRADCRDCEGCSACCRGMGSSIILDPLDIKRLCCGCSAD FAGLMERYIELNVADGMIVPNLKMNGQEEACAFLDGSGRCGIHAFRPGICRLFPLGRYYE EKGFRYFLQIHECRKKDRGKIKVKKWLDTPDLKTYEQYTADWHGFLTDCQAAAETLDEEQ ARILNLYVLKTFYQTAYETEQFYSEFYGRLDQARETLGI >gi|224461043|gb|GG657761.1| GENE 214 246871 - 250071 2825 1066 aa, chain + ## HITS:1 COG:CAC2674 KEGG:ns NR:ns ## COG: CAC2674 COG0210 # Protein_GI_number: 15895932 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Clostridium acetobutylicum # 496 1057 24 655 756 237 28.0 1e-61 MYIADLHIHSRFSRATSKDCTPEALDMWARRKGIHIVGTGDFTHPAWREELEEKLVPAED GLYVLKEEYRIKDETAAAGDIPRFVITGEISSIYKKNGRVRKVHNVILLPGLEAAEAIAK KLEAVGNIHSDGRPILGLDCRDLLEIILELSPDAVLVPAHIWTPHFSLFGAFSGFDTVEE CFEDLSPYIHAMETGLSSDPPMNWRVSALDRYQLISNSDAHSPAKLGREANLLDIELSYS GLKAAVQEGRGLCGTLEFFPEEGKYHFDGHRKCGLCLTPVETEKYGGICPVCGRKITIGV SHRVEQLADREEGYRRKDAAMFESLVPLPEVIGASVGHAPASRGVQKEYLSMLKRLGPEF DILRTIPEEEIRAASGVLIAEGIRRLRRGYVERIPGFDGEYGSVRLFEPHEIENTSGQMD FFDMLGMNVKEVGAENKVPPGPAVKQTEEQRPGEKETGKEGQKQKEHKAKEQIPETERLD PGQESAVRSAARRTAVIAGPGTGKTKTLVSHILYLLERRKVKPSEITAVTFTNEAARELR ERIQRQLGGRRRVGTMQAGTFHAVCLAFLKEQGLSFSLADETEAKEIAAEAAKESGLHIT GKQLLEQVSREKSAALSEEEMSPQVREYERRLKERKLLDFDGLLLETLRLMEAGAAADGF RKRCAYLLVDEFQDINPLQYRLMKAWNEGGRELFVIGDPDQSIYGFRGADAACFDRLREE YPDLEVIRLEENYRSTPEIVAPAIKLICGNPGEERTLRANCEGGVKVRLAAAGTPMGEAI FVAKEINRLAGGIGMLEAHEMDVTRGERKVRGFDDIAVLYRTHREADILETCLKKEGIPY IVAGRESYLQEDIVRGSLFFFRYLADALDTHAREQGLKLLWGLEQNPVSEEVFERMAEKY RPLYAKEKPQKFMEQWIQDIQAADNEAMKKLSGMAVCYKDMEELSKALSLGVESDLKRRG DRQYSSGAVTLMTLHGSKGLEFPAVLIFGVRRGTMPFESERHPADKEEERRLFYVGMTRA KEELILTCSGEESEFLNDVPAGLIVREQAHKKKKEETVRQLSLFDL >gi|224461043|gb|GG657761.1| GENE 215 250150 - 250998 860 282 aa, chain + ## HITS:1 COG:CAC3475 KEGG:ns NR:ns ## COG: CAC3475 COG0789 # Protein_GI_number: 15896713 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 279 3 240 243 119 31.0 5e-27 MRTVNEISKITSISVRTLHYYDKIGLLKPTAYTEAGYRLYDDKALETLQQILFFREFDMP LKDIKATMERPDFDREAVLNSQRAILEVKKSRLERLISSIDGILKGENEMDFEVFSRDEI KELYDTMVSNMESGQVDAVVRKYGSLEKYEEQFIEKAGSGRAQKNLQKVTEWYGGRKEAL DAAKNPAGSGVMDAYQKRIDKIYRKIAAKAGTDVNTFEVKELIGEYDFVSKQLYQMKDVT ELLLEMADAFKKSGPLKESMEEQYGPGAPDYIAEAVKAFYGR >gi|224461043|gb|GG657761.1| GENE 216 251138 - 251392 373 84 aa, chain + ## HITS:1 COG:lin2889 KEGG:ns NR:ns ## COG: lin2889 COG3070 # Protein_GI_number: 16801949 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Listeria innocua # 1 83 1 83 83 68 43.0 4e-12 MGELSKLPNIGPVVEQQLNEVGIMTAEQLRETGSRQAWLKIKAIDDSACIHRLLGMEGAV RGIKKRDLPPEVKAELKEFYNAFK >gi|224461043|gb|GG657761.1| GENE 217 251379 - 252281 224 300 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020671|ref|YP_526498.1| ribosomal protein S6 [Saccharophagus degradans 2-40] # 9 292 9 291 293 90 25 6e-17 MLSNNKARIQIILSMVIFGTIGAFVKNIPLPSAEIALWRAVTAFLMLTGAAAAGGRLKQI RAVKGRILILLGSGAALAFNWILLFEAYRYTSVAVSTLCYYFAPTLIVLSSVLIFREKLK VRQAVCFAASTAGLVLVIGVSGGGSNDTAGALYGLGAAVCYAGVVFFNKTLGDIDGLVRT WLQFGAAMLIMFPYVIFTCGFAVTGLDAKGTVLLLIVGVVHTGITYCMYFASLTGLKGQQ AAILSYIDPMVAILVSFIVLGETVTVPQIAGGAMIIGFAFLNEVKGRSRRKAKEKIESRK >gi|224461043|gb|GG657761.1| GENE 218 252285 - 253058 797 257 aa, chain + ## HITS:1 COG:STM0005 KEGG:ns NR:ns ## COG: STM0005 COG3022 # Protein_GI_number: 16763395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 248 1 252 257 138 35.0 8e-33 MQIIISPAKKMNVNTDVFACHDLPPYMDKTEYLMEYMKSLTYEQCKAIWKCNDKIAKLNF RRFSGMDLYKSLTPAILSYEGIQYQYMAPAVMEDRTFAYLQEHLRILSGFYGMLRPFDGV VPYRLEMQAKLGRHGDCPQMDSLYEYWGDTMAGDIFEEDKVILNLASKEYSKCITRYLHD GVTFVTCVFGELSEGKIKEKGTPAKMARGEMVRFLAEHEAHSMDDIRKFDRLGYRYREEY SGEDTLVFLKDDGGAAR >gi|224461043|gb|GG657761.1| GENE 219 253106 - 253918 741 270 aa, chain + ## HITS:1 COG:CAC2707 KEGG:ns NR:ns ## COG: CAC2707 COG0122 # Protein_GI_number: 15895964 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Clostridium acetobutylicum # 1 264 13 284 292 191 38.0 2e-48 MVTKETDNFNIEQICISGQCFRMEPIDGSTYSVVAGGRYVEITQEGKSCTFRCAEEEYES FWRHYFDLDEDYGAYIKNIDVKDDYLRSAALLGSGIRILRQDLWEMTASFLISQQNNITR IRRCISNICETYGEKRESASGRVYYTFPEPEALAELEEDALKECNLGYRSKYVVRTARSI AYGDVNLDHIRSLSYPEAKAELLKLYGVGDKVADCICLFGLHHLDAFPVDTHISQALKAH YRRGFPKRRYKGYRGVMQQYIFYYELNGKR >gi|224461043|gb|GG657761.1| GENE 220 254276 - 254557 123 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571488|ref|ZP_03780484.1| ## NR: gi|225571488|ref|ZP_03780484.1| hypothetical protein CLOHYLEM_07586 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07586 [Clostridium hylemonae DSM 15053] # 1 93 28 120 120 184 100.0 2e-45 MLKELSRTLEISVDELLDGEEYSGQAGGKKSGMYRETEGHGQKKRRTAAVICVVPALLLL CMQLAYVTAGKNTVWSISQIFCRTLLIYWRQFC >gi|224461043|gb|GG657761.1| GENE 221 254497 - 255786 1163 429 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571489|ref|ZP_03780485.1| ## NR: gi|225571489|ref|ZP_03780485.1| hypothetical protein CLOHYLEM_07587 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07587 [Clostridium hylemonae DSM 15053] # 1 429 1 429 429 832 100.0 0 MEYISDFLPYLVNILAAVLLTAAAVLIWREKKAVRVGAAVAGSVIILAAGAAGIREVRER SAVWSLSPDYRHMLVLKYEETSGRVTTYRDQILWFARRSDQFPYTSGKDMKVQWLADDAC AVTYQSPDDGNVHEYVMTYGDRGDGITTPYVYNLITGSWTGEGKNIAGWSIKTTADGLVV RSDGRVEETYAFEDCVQFGTLALALCREGLPQWTIVLDENCVAGEDDFLEDGGTISLCKV SMEKTAPMHFTRTEAPESFESDRGAAPDVAASGKTMAKEMREILKKDPALADFRSSQLGY LKVAYGQDDIFQAARLALEENDRQYTVNGIDVTRNITHMELLAGDKYDCLVQIDSTDVYS DPYSKDAEELEMTASYRLMRGEGVYLAYQVPYGTDGSSGLDAPAVKKELDTEGDPGYSYF VPGERQEEQ >gi|224461043|gb|GG657761.1| GENE 222 255787 - 257880 1560 697 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3336 NR:ns ## KEGG: Cphy_3336 # Name: not_defined # Def: alpha-tubulin suppressor and related RCC1 domain-containing protein # Organism: C.phytofermentans # Pathway: not_defined # 425 675 187 467 787 110 29.0 2e-22 MEKMDEFTYDTVPDNYREKYEKCQKNRIDAFVIVAGYGVLLIAVMLQAVGVLAGWRPVLA MMALAAVAEAVVLGIVRLCYHCSGKKLAALIRSREQSSLVGTFYPDYLFVAYGDGRKESI SYSDITAVRETEAYFDICSGAAGLRLDKKYLGRDGILCLRNKMKKHCPHKYTCGLLPEDE PLCIEIGWGEGDREQAVECASMYMLYRLRYYYSEKRAGFASVLAAAVFFMNISNPMLTVT VCMCLIVGVSMLIMLVRWLVFWLTLKATKKNYANRPQDAKTIVELSAEELVIHTYNRVIG LPLDKLESVTEGERFFAVNDQFIFKGDMSGEEQSVLRGRLKKYCREGFRYIDAADPVRNQ QIRSAVSLVVQLLFIILIILNYHAHPLRTGESFKSGTAPEERQGKSEEKTDGVPAVPYVD TPDKDALHLGSRELRIEDCYCGNAVNLSSRFYIENGILYGISANEHGELGRGDTDGHINA RGYYPPYEIADGVKHVALGKYFMLFINEDNELWGTGDIPGTEGKMKVTKLMDHVRFAACT EEAMAVLKEDGTVWCGGTVKDLSGAGIVSYNGLEQTLSHMKYVTAGQNTLAAISDDNVLW TWGDNSYGQCGLPAAKEKVLAEPVQVREKVKSVWADALLYDSPEQYPLYDRKEPLSYVRH QTYIQQTDGEVYACGENLASGGEDVFVRVMLQQTDVR >gi|224461043|gb|GG657761.1| GENE 223 258016 - 258480 560 154 aa, chain + ## HITS:1 COG:CAC3493 KEGG:ns NR:ns ## COG: CAC3493 COG3708 # Protein_GI_number: 15896730 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 151 1 146 146 146 50.0 2e-35 MEYEIVTLEEKTVVGLTARTNNTSPDMGAVIGGLWQKFYGDKVYDSICNKRDGKALGIYT DYAGDEKDDYTIMTGCEVSKAEEIPPEAAVKHIPAGKYARFVVKGELHKSVGAFWQKLWQ MELDRAFTADFEEYQNSDPEHTEIHIYISLKAEE >gi|224461043|gb|GG657761.1| GENE 224 258453 - 258848 541 131 aa, chain - ## HITS:1 COG:no KEGG:bpr_III171 NR:ns ## KEGG: bpr_III171 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 3 120 2 119 126 76 40.0 4e-13 MDFEQDYVMRLVKDLVRFLMQLITGKPQFRYETDAEEPSPCGDDYTRIIAMADAGRINEA ENLLYENLDTDNEDYLLMGLSFYSHINDYKDDFLLESNYSREEIKDGIENFVKEYGVTGL ETFYSSALRLI >gi|224461043|gb|GG657761.1| GENE 225 258866 - 259312 483 148 aa, chain - ## HITS:1 COG:no KEGG:Cbei_3478 NR:ns ## KEGG: Cbei_3478 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 147 1 150 151 76 32.0 3e-13 MKKTVDERQELELMKIERAGFWVLFFALTADILLKVLFFQVPVQELIGEHIAFFAGCITI IAGCTKRGLWTYYSVPCLRDYLVHSLAATVIFTILFAAAMALRGVRHLAGITLAFAVFIF LLMFGVLAAMGEYTKRKQRKLDDTYGDD >gi|224461043|gb|GG657761.1| GENE 226 259293 - 259514 228 73 aa, chain - ## HITS:1 COG:SP1423 KEGG:ns NR:ns ## COG: SP1423 COG1476 # Protein_GI_number: 15901276 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 2 67 13 78 79 87 65.0 7e-18 MKNKKMKLARINMDMSQEDLARHVDVTRQTIGMIEAGKFNPSLRLCLAICRALGVTLNDL FWEEDEEYEKNSR >gi|224461043|gb|GG657761.1| GENE 227 259679 - 260197 528 172 aa, chain + ## HITS:1 COG:MA1614 KEGG:ns NR:ns ## COG: MA1614 COG2110 # Protein_GI_number: 20090472 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Methanosarcina acetivorans str.C2A # 2 168 29 193 195 194 58.0 5e-50 MIHVIKGDITRLTDVDAIVNAANSSLLGGGGVDGAIHKAAGPGLLEECRALHGCPAGEAR VTGGYRLPGRYVIHTVGPVWRGGGKKEDEVLAGCYRNCLEAAARKRITSIAFPAISTGIY GYPKERAAGIAVHTVQSYLEEHPGKIEKVIFVLFDDESLQIYKELMKKRGRV >gi|224461043|gb|GG657761.1| GENE 228 260194 - 260829 209 211 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 53 206 58 213 378 85 34 3e-15 MTKKKLALEIIERLKKEYPDAGCTLDYDHAWKLLVSVRLAAQCTDARVNVVVEDLYEKYP DVEALASAPPEEIEEIVRPCGLGKSKARDISACMKILRDEYGGNVPDDFDALLKLPGVGR KSANLIMGDVFKKPAIVTDTHCIRLVNRMGLVDGIKEPKKVEMALWKIIPPEEGSDFCHR LVYHGRDVCTARTKPFCDKCCLADICKKAGV >gi|224461043|gb|GG657761.1| GENE 229 260864 - 261511 511 215 aa, chain + ## HITS:1 COG:lin0495 KEGG:ns NR:ns ## COG: lin0495 COG2755 # Protein_GI_number: 16799570 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Listeria innocua # 6 201 3 197 197 127 35.0 1e-29 MEGQTKLLFLGDSITDADHNLDGDPDSLGDGYVRIIAERIKDRGVCFVNKGHDGFTVPAL LRMLDADCISAAPDVVTVLIGCNDAGIEMHTQRTLKQQKFEENYGRLIRRIRTETAARIL CMGPFIFAEPARYRRWFPVIEEAEAIERKMALRYGAEFLPLHNVLNRAADAEGTGEITVD GIHLNRRGARIVAEEWLALYKPSFPVGIIKEEHKG >gi|224461043|gb|GG657761.1| GENE 230 261458 - 262804 1244 448 aa, chain - ## HITS:1 COG:FN1653 KEGG:ns NR:ns ## COG: FN1653 COG0534 # Protein_GI_number: 19704974 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 9 445 8 443 445 317 41.0 3e-86 MRRGTHNTNQITEGVIWKQLLIFFFPIVFGTFFQQLYNTIDTIIVGHFVGKEALASVGGS STQIVNLIVGFFTGLSSGASVIIAQFYGAKNKHALNESLHTAYAFSAAGSIAIGILGFVL APRLLMWMNTPAELMADSTVYLRIYFAGILFVFIYNMGSGILRASGDSRHPLYYLIVCCM LNIVLDTVFIVVFHMGVTGAAAATLLSQAVSALLVTLRLTRAETILKLSFTHIRIHGPIL RSLLRIGLPAGFQSVMYNISNTMIQASLNTFGTDTSAAWSVYNKLDGLFWMMSGAFGIAI TTFVGQNYGAGKTDRVKKSVRVCLGIDLLFSGILVVFFMVLRIPLFGIFTSDPEVIRLGS WMLALITPCYIFYVFLEVLSGALRGIGDVIIPLIITMCGTCLLRIIWIAGALKFRPAVDT IIFSYPVSWIISALMFLFYYSYRKRRLV >gi|224461043|gb|GG657761.1| GENE 231 262928 - 264094 803 388 aa, chain + ## HITS:1 COG:no KEGG:Closa_2166 NR:ns ## KEGG: Closa_2166 # Name: not_defined # Def: FliB family protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 367 1 370 386 272 40.0 2e-71 MRYTIPDYYRQFRCAAGQCEDTCCAGWQIQIDERSLGRYARLKGRAGRKLRRSIRWRQRI FRQKEGKRCVFLNQDNLCDMYTELGEKSLCRTCRLYPRHIEEFEGIREITLSLSCPVVAR LLMNREEPAAFPACEKDGEEEYEEFDLLLYSALADAREVILDILQNRAVPAQAREQRMLA LADEVEKNYMEGALFSCQELFDAPGRAEAAGKPGGAENNEARMGRRFCFMKKMFAFLDTL ELLREDWKSCLDETRALLYSQADAGYAATCLEFGAWMKRYMPMWEIQSEQILVYFISVYF CGAVYDGRISAKAKLAAVSRMIIEEMLMARWIKNEKTLDTEDIVETVYRYAREVEHSDKN VNRLESLMEKVPSNLTSYVSGFVPPCTV >gi|224461043|gb|GG657761.1| GENE 232 264122 - 264895 1048 257 aa, chain + ## HITS:1 COG:BH0286 KEGG:ns NR:ns ## COG: BH0286 COG1136 # Protein_GI_number: 15612849 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Bacillus halodurans # 4 257 6 259 259 329 64.0 3e-90 MKERILQVQGLRKYFGKNDNRTKALNGMTFDVLKGEFLGIMGKSGSGKTTLLNCIATALK PTEGKILLDGKDIGAFSDRQLADYRGSRIGYLYQEFELLDNLTGRENITLPMSIRHIDEE EGAARLAELTDYLEIGEVLDKFPAGMSGGEKQRVAAARALILDPEIVLADEPTGALDTQN ARVLMQKLHGLNCEFGRTILMVTHDAGAASYCSRILFVQDGYIFHELRREFPHESQKNYY ERILAAMAQLGGSADVF >gi|224461043|gb|GG657761.1| GENE 233 264885 - 266957 1933 690 aa, chain + ## HITS:1 COG:BH0287 KEGG:ns NR:ns ## COG: BH0287 COG0577 # Protein_GI_number: 15612850 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus halodurans # 1 638 1 673 722 335 33.0 1e-91 MFFNMVGRNSRRDRKENGMFFGSLTAAVVLFYMILSLENQDVMQFLHTMESDAVDRLLGL VSVLYGFSLFLIFFLVYFAGKYQMERRSHEFGLYLMLGMKRSRLFGILMAEDMWNSVLAL LAGLPLSVFLSEMISLITSRLVGLGIIGHRSSFSVTAVLWTAAGFFGVKFLAFLILSGKI ARQEISVLMEEGQEEKQREEQGRSPVLRFAAGLLLLAAAYGTALSGMAWRDVRTMTVTVI VGTAGTFLLFSGLGKRLEAVMLRKKQKKGLYTFTCRQLQENVFLKHRSMAVSSLLILMAL VCFSYGIAMGRAAGREEGHAADFTFTGGEADIRRELAAPELKEMLGGLSEVKAGLLFTEE EPEGTGHRQHTFGMEQLLEAADKLKDSEEKETFKDNLRYFTSPYVISLSGYNEILKMAGK APIRLSDNETAFYTDADYSDGAYKKVVDEVCRMRPVVTIDGEDHKVTGTLCTENLVADRL ITISLGLILPDKVFDRLFAGEEVNVYWNTYVQRELVEEKGLLQAVMQVNSLLKKTDLEYE SYLQGIGRQMFYNVASTYVSLYLAAIFLIIGNTVIGVQFLMQQKKCGKRYRMLIMLGSDS GAVCRSLDTQIRWYFALTVLTAVISSIFGIGSLFKGILPTALEGRAGVLFWTALLAAGLL CIVEYVYITIVMRAGRRHILEMVRPAKERT >gi|224461043|gb|GG657761.1| GENE 234 266972 - 267658 633 228 aa, chain + ## HITS:1 COG:BH0288 KEGG:ns NR:ns ## COG: BH0288 COG0745 # Protein_GI_number: 15612851 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 1 219 1 219 225 233 52.0 2e-61 MKKIVIVEDETYMREELEYIFQKAGYEVLCITDFGSASAAVFRYAPHLVVLDLNLPGKSG FDICMELKERSSCPVLVLTSRNHLNDELRALRIGADEYLTKPCRKERLLARAENLMRRFE GREQEIRLGELTLDIRTYTLYVSGCSVLLPENQGKIMEKLMKKRGGTVTKEELSSALWGT TEYIDENALQVNMTRLKKTLARLSLDGRIETVRGVGYRIAKGDAYGKD >gi|224461043|gb|GG657761.1| GENE 235 267678 - 268667 799 329 aa, chain + ## HITS:1 COG:BH0289 KEGG:ns NR:ns ## COG: BH0289 COG0642 # Protein_GI_number: 15612852 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 3 329 14 340 346 229 35.0 5e-60 MDHKLWLGLLLLSDTVFGLFLWLADIRAFRELAGMFFLFSLLLFAAAAACTYRREVRQSK LVPEYLGSPDEEMEEQLCRCLSAGERRHIRLAAQLLCQKEERIKEQVIRLEEYETFIETW AHEVKTPLALMTLVLDNRRNEIGPDIHKRLEYARNQMHGFIEQILFYARLKAVHKDYLLE KVSVAESVGEVLDEYEMLIHEAGFHIEADISDEQVVTDKKSLCFILSQIMGNSIKYTRTE EIRPELSVTLRRSGSDRKLVLEIEDNGTGIKETDLPFIFDKGFSGDAGGQRKKSSGMGLY LAAQIAGELKIGLDAHSVYKKGTRITLVL >gi|224461043|gb|GG657761.1| GENE 236 268747 - 269208 550 153 aa, chain + ## HITS:1 COG:no KEGG:Closa_1284 NR:ns ## KEGG: Closa_1284 # Name: not_defined # Def: spore coat protein CotJB # Organism: C.saccharolyticum # Pathway: not_defined # 67 153 3 98 98 75 38.0 6e-13 MSKEQLAIASVPVQDYGEIYDDKKALCEGTIFSELDMPFFAADGENGKSSGKSALFGMNQ KLPEEKEREELMTKLTEVSFVLDDLTLYLDTHGDEEQAVSLYEQKLTERETLKKQFAEKF YPLTRDCIPYCTKKEDGRFCWQTGPMPWEGACV >gi|224461043|gb|GG657761.1| GENE 237 269208 - 269825 683 205 aa, chain + ## HITS:1 COG:CAC1338 KEGG:ns NR:ns ## COG: CAC1338 COG3546 # Protein_GI_number: 15894617 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Clostridium acetobutylicum # 1 185 1 185 200 218 56.0 5e-57 MWQYEKRLQFPVKITKTCPKTAQMIISQYGGPDGELSASMRYLAQRYTMPVKAVGGLLTD IGTEELAHMEIICAMVYQLTKDLTIEQAKTAGFDAYYIDHTTALWPQAAASVPFTSLEFQ SKGDAIADLTEDLAAEQKARTVYDNLLRMITDPEVREPLKFLRTREIVHFQRFGEALEKT KDQLDSKNFYYFNPEFDKDKFHGKL >gi|224461043|gb|GG657761.1| GENE 238 270130 - 270474 298 114 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571505|ref|ZP_03780501.1| ## NR: gi|225571505|ref|ZP_03780501.1| hypothetical protein CLOHYLEM_07603 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07603 [Clostridium hylemonae DSM 15053] # 1 114 1 114 114 228 100.0 1e-58 MSAYLIFTFIFAAAVLVFCYVLTRYWFGTGRHMPEQDVGKLRFGSKTAFALTHFWKAVDD AKELPSETVKGGMGSAAGITAEDRSGPVLSDGGRKPAEVRNGYVRRKYRLKENM >gi|224461043|gb|GG657761.1| GENE 239 270742 - 271323 608 193 aa, chain - ## HITS:1 COG:CAC0130 KEGG:ns NR:ns ## COG: CAC0130 COG1971 # Protein_GI_number: 15893426 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 193 1 200 200 101 31.0 7e-22 MHLISSVLFALSANIDTLIVGISYGIKKERVPFAENIVISLITFAGTIFSIYMGLQLTLF IPASVAQRIGCIVLIVLGLYYTVKSMIEYRQGKLPPDDWDNPEAEPPDKTITLREAVLIA CALTVNNMGMGIGASISGMKLIPTSIATLLICMVFLYTGNKIGRIGVSGVLKRWAGPVSG VILIVLGLYEMFL >gi|224461043|gb|GG657761.1| GENE 240 271438 - 272484 1286 348 aa, chain + ## HITS:1 COG:BS_yunA KEGG:ns NR:ns ## COG: BS_yunA COG0739 # Protein_GI_number: 16080287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Bacillus subtilis # 169 320 209 349 349 86 34.0 8e-17 MRKFVISPKGIAAELLLIILAAALLFGRGYAEKTAAVAEKKEEDYIKWVEFNVSCEALDK AYEYDAETYGKEPHLDWIELLAYLGAKYGGDFSGYKDSDMEELAEKLSDGGTDIEALTKD MQYYEYYHEAYEAVLGGMVGTYKIQGEDGKYKDAYGLKAFHPIAKGFPYSDYDDFGVSRT YGYKRNHLGHDMMGQVGTPVVAVESGYVMELGWNQYGGWRIGVSSFDNRRYYYYAHLRQD FPFAGSLKEGAVVQAGDVIGYMGRTGYSTKENVNNIDTYHLHFGLQLVFDESQREGNNEI WVDPYPLVRFLYKNQSETKRDDATKEWQRIYNIKDPAAQQYKKGRKDK >gi|224461043|gb|GG657761.1| GENE 241 272563 - 274677 2396 704 aa, chain + ## HITS:1 COG:alr1230_2 KEGG:ns NR:ns ## COG: alr1230_2 COG2200 # Protein_GI_number: 17228725 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Nostoc sp. PCC 7120 # 443 694 4 254 266 153 34.0 1e-36 MEYDQISSQIMDESENMVYISDPDSFELVYMNRALEEQFGTGCKYIGEKCYKVLQGLEEP CPFCTNKYLTKDRYYIWKHYNPVFKKYFELKDKLIEIDGRNMRLEIGTDITETETEHQEL ERQLSIEETLVECIHTLSEHMEIDTAINELLRIIGDFYKADRAYIFEIDYEAETASNSYE WCREGVIPQIDKLQDLPVCILDIWIETFRVRNEFYFDALDEFAKEGAEDYKLLAEQGIES LMAAPFWKDGELLGFIGVDNPSCGTEQIKLLQSVPYFIENDITKRHMLDKFRELSYRDTL TGLGNRNLYIETIEGLQQRELHSLGVLFVDINSLKYSNDNYGHQYGDRIIQNVAHGLADI FPENAYRVGGDEFVCLFIDGERREFERRILRLRRFEQEDCMCDFSIGVNYREGDVDIKEQ IGYSDNMMYVEKQIYYGNAVEGKNSYHEMLAKKLVGEIASGEFEVYLQPKVDIDTGGLYG AEALVRRRMESGEVLMPGQFIPLYEAEGVIQQLDLYVFEEVCRLLESWRKKGYRMIPIAV NFSRISLMGIDIMESLARIREKYEIEPGLLTIEVTESISRMGAEALGQLMDKFKELGFEF SLDDYGTKYSNLSLLARLEFKELKIDQSLIRDILTNRRSRIVLEHTIEMCQELGIITAVA EGVETEEQRELLKHYHCDIGQGFLFSEPIPIGEFLDKYGREYLY >gi|224461043|gb|GG657761.1| GENE 242 274854 - 277334 2782 826 aa, chain + ## HITS:1 COG:L168650 KEGG:ns NR:ns ## COG: L168650 COG0474 # Protein_GI_number: 15672557 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 36 812 5 773 775 729 50.0 0 MRRKSDHDDIKVQEEIYEYEEERGPVTRYEPDYRDGLTGRQVKEHAAAGYRNVPVDPPSQ TVGEIVHENVFTYFNLIFAVLAVLLCLVGSFRNLTFLPVIIANTLIGIVQEVRAKNILEK LTMLNAPQAVAVRDGKPSTVGSEELVLDDIVIFKAGNQICADAVVAAGEVQVNESLLTGE ADEITKKKGDHLMSGSFVVAGQCHARLEYVGADSYISKLTLEAKAMQKGEQSEMMRSLNK LVKFIGIALIPIGIALVVQSLFFNDETLRSSITSMVAAVIGMIPEGLYLLASVALAVSSM RLAKQKVLLHDMKSIETLARVDVLCVDKTGTITENSMSVKKLIPVTAGEKKTEEAEKNTG EDAETVLSRMIGDLALAMSSDNSTMEALKVYFKEHTDAKPVKVTPFTSKTKYSGVTYEDK AHVLGAPEFILREDYETYKDEIQQYAGKGYRVLVFAGYDGEIDGNELTGKAEPLAYILLA NPVRKNAPETFAYFAEQGVEVKVISGDNPLTVSEVAKEAGIKNAENYVDAAVLATEEDAA EAIAKYTVFGRVTPAQKRQFVQALKEQGHTVAMTGDGVNDVLALKDADCSVAMASGSDAA VQASQVVLLESDFSCMPSVVLEGRRVVNNIQRSASLFLVKNIFSFLLSLFAVAFMITYPL EPSQISLISMFTIGIPAFFLALQPNQEVIKGHFLTNVFLKALPAGLTDVLAVGALVVFGR TFDVSPTDISTAATMLLAIVGFMILFKICQPLNTLRIIVWIGSMAGLLACSIFLPDLFAI TGMSVECIMLFVVFSIATEPVLRYLTLLVGRLRLIYRKRVKKETGL >gi|224461043|gb|GG657761.1| GENE 243 277340 - 277870 499 176 aa, chain - ## HITS:1 COG:CAC2749 KEGG:ns NR:ns ## COG: CAC2749 COG0622 # Protein_GI_number: 15896006 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Clostridium acetobutylicum # 1 171 1 172 180 164 46.0 6e-41 MKLMIASDIHGSAHYCRKMTEAYRREQADRLLLLGDILYHGPRNDLPENYDPKEVIALLN PLKNELLCVRGNCDTEVDQMVLDFPILADYCLLELDGQTLFATHGHHWNPQTPPPLKEGD ILLNGHTHVPAHENMGTYTYMNPGSVSIPKENSARGYMLYDKKFLWKDLDGAVLNI >gi|224461043|gb|GG657761.1| GENE 244 277969 - 278481 536 170 aa, chain + ## HITS:1 COG:no KEGG:Closa_3061 NR:ns ## KEGG: Closa_3061 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: C.saccharolyticum # Pathway: not_defined # 6 170 4 171 172 112 38.0 5e-24 MSKRMFVKRAGYGDVPAIRRIMEDSEKLARDKDWYVIDNISFLERHVEEEGITLKAVTDG TMAGFLIIRYPKSAEDNLGSYIRLTEEQAMTVAHMESAAVVPVYRGRGIQKLLMDSGEKL LAETEYRYLMGTAHPDNIYSVNNFLKLGYDIVAEDEKYGGLPRYVFCKNI >gi|224461043|gb|GG657761.1| GENE 245 278501 - 279313 850 270 aa, chain - ## HITS:1 COG:lin1914 KEGG:ns NR:ns ## COG: lin1914 COG2365 # Protein_GI_number: 16800980 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Listeria innocua # 6 269 45 297 298 174 34.0 1e-43 MKEIKRIPLEGLFNTRDLGGIVTEDGRRIRPHRLIRSGMLRDMTGQDEKTLAGTYGLKTI IDFRTADEQAESPDPSIPGVRHISNPILEDMTAGITHDEESDRQLSLGEATVSMRERGID PASYMRQMYEEIITSEYSLNQYRSFFDILASQTAGAALWHCSAGKDRVGIGTAMLLYTLG ADMDTIMKDYMMTGSFLQEEIDRIISRLSHRITDPSALESIRICMGVKEDYLESVFSIMK KTSGSIRAFLENNVGLDREKTDRLKALYLQ >gi|224461043|gb|GG657761.1| GENE 246 279568 - 279729 267 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571514|ref|ZP_03780510.1| ## NR: gi|225571514|ref|ZP_03780510.1| hypothetical protein CLOHYLEM_07612 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07612 [Clostridium hylemonae DSM 15053] # 1 53 13 65 65 88 100.0 2e-16 MTEELIKEVKHIQRCLAAKDMRGDEWEEKQEIINKLEAVSDYLKDALGKGIEF >gi|224461043|gb|GG657761.1| GENE 247 279733 - 280401 687 222 aa, chain + ## HITS:1 COG:VCA0102 KEGG:ns NR:ns ## COG: VCA0102 COG0637 # Protein_GI_number: 15600873 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Vibrio cholerae # 4 213 8 215 219 141 36.0 9e-34 MIDALIFDMDGLLFDSERIVQRSWEDCGNVLGLPGMGSHIYNTLGMNAAARRVYFTREVG ADFPHEEFAALTRVRFREITDEEGLPMKPGVKELLTYARDHGLKTALATSSRGEYAMRNL TDAAIKEYFDGFVFGDMVSRAKPDPEIYLAACQSIGTAPGRCMALEDSPNGIRSAHAAEM VPVMVPDLVRPDEELRSLTYKIVDTLHDVPAILEELNRDRTP >gi|224461043|gb|GG657761.1| GENE 248 280445 - 281302 703 285 aa, chain - ## HITS:1 COG:mlr3209 KEGG:ns NR:ns ## COG: mlr3209 COG1092 # Protein_GI_number: 13472800 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Mesorhizobium loti # 9 285 58 338 338 224 41.0 1e-58 MWIADQWKDYEVLDCSRGEKLERWGRYILVRPDPQVIWDTPKENSGWNNKNGHYHRSKKG GGEWEFFHLPEQWQIHYKELTFNLKPFSFKHTGLFPEQAANWDWFSDKIKHAGRPVKVLN LFAYTGGATLAAAAAGASVTHVDASKGMVAWAKENAASSGLSDRPVRWLVDDCVKFVERE IRRGSKYDAVIMDPPSYGRGPKGEIWKIEDAIHPLIRLCTRILSDNPLFFLVNSYTTGLA PAVLTYMLGTELKKYNGRVDSQEIGLPVTDSGLVLPCGASGRFEA >gi|224461043|gb|GG657761.1| GENE 249 281467 - 282198 778 243 aa, chain + ## HITS:1 COG:MA3621 KEGG:ns NR:ns ## COG: MA3621 COG0613 # Protein_GI_number: 20092421 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Methanosarcina acetivorans str.C2A # 26 220 1 195 224 89 31.0 4e-18 MGGRKVYIMYVGILLYCFKRTGVNSMFIDTHMHEMTYSKDSILTLREMVERGREKGLGGI CITDHDSMGIRDYAREYAAKTAFPIFTGIEYYSLEGDIVAFGIREYPKERVPAQEFIDLV KAQGGVCYAAHPFRNNNRGLEENLLKVKGLDGIEVLNGSTSKEACAKAALYAKRLGLITL GASDCHVPEKVGVCATYFPEEVKTEEEFLNVFKKGGLKPAYYQDGQYHIAGLERSLLPQY YTR >gi|224461043|gb|GG657761.1| GENE 250 282299 - 282880 770 193 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3158 NR:ns ## KEGG: EUBREC_3158 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 193 1 205 205 212 55.0 6e-54 MITVNAMGENCPIPVIKTKKAIQALAGPETIEVLVDNEIAVQNVTKMAESEGGEVSSEQI SDGEYKITVKMEGAPGEEKQEAGSMVIAVSSDRMGAGNDELGKVLIKGFIYAVTQLDVLP KAMLFYNGGATLTAEGSDSLEDLKLLESQGVEIMTCGTCLDYYGLKEKLAVGTVTNMYSI VETMAGASKVIKP >gi|224461043|gb|GG657761.1| GENE 251 283023 - 283982 1100 319 aa, chain + ## HITS:1 COG:Cj1504c KEGG:ns NR:ns ## COG: Cj1504c COG0709 # Protein_GI_number: 15792818 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Campylobacter jejuni # 13 313 7 302 308 233 42.0 4e-61 MLGKLPKFEDENLIVGIETSDDAAIYKVTDDIAMIQTVDFFPPIVDDPYMFGQIAAANSL SDVWAMGGEPAVALNIVGFPNCLDPGILGDILAGGAAKVKEAGAVLVGGHSVQDDEPKYG LCVSGFVHPDKIFKNYGCRPGDVLVLTKQIGSGIVNTAIKAEMASASAVREAQTVMASLN KKAKQVVERYDVSACTDITGFGLLGHCVEMASASGVTFELNVQDIAYFEDAADYAKMGLI PAGAYKNRGYSIDKVDAGCVQEYYLDLLYDPQTSGGLLISVPKEDLASMMREFGQTEMDT KVSVIGRVADKSDRLIRLF >gi|224461043|gb|GG657761.1| GENE 252 284068 - 285495 1583 475 aa, chain + ## HITS:1 COG:aq_1031 KEGG:ns NR:ns ## COG: aq_1031 COG1921 # Protein_GI_number: 15606324 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Aquifex aeolicus # 6 463 4 449 452 366 45.0 1e-101 MDKNMLYRSIPKVDVLLESKAVRGMIELYSRDTVMEAIRIETDKLRAFIGQCDDEEAARA QTEMLTAHIEMTVAAMHRPNMRMVVNGTGTILHTNLGRAPISGEHMKKVAAIATGYSNLE YNLEEGRRGERYSHFEKLLCKITGAEAAMAVNNNAAAVMLILSSLAKGGEVIVSRGELVE IGGKFRIPDVMEQSGATLVEVGTTNKTHYDDYENAVTEETKALLKVHTSNYRIVGFTDTV AVDELVPIAKKHDIPVIEDLGSGVLIDLSKYGLTYEPTVQDSIQKGADVVCFSGDKLLGG PQAGIIIGRKKYIDKMKKNQLTRALRIDKFTAATLELVLQEYLSEEKAVEHIPVLRMITK PLEEVTEEARELAGLLEAAGLPAQIRTEPCESQIGGGSLPLERIPSMAVAIRPEKISVPE FEERLRHLPVPVIPRTVNDTVLLDVRTLLKREFKLIAEQIKELDVLEETSLIASR >gi|224461043|gb|GG657761.1| GENE 253 285510 - 287423 1992 637 aa, chain + ## HITS:1 COG:PA4807 KEGG:ns NR:ns ## COG: PA4807 COG3276 # Protein_GI_number: 15600001 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Pseudomonas aeruginosa # 4 629 1 620 641 289 31.0 1e-77 MKNIIIGTAGHIDHGKTTLIKALTGRNTDRWEEEQRRGITIDLGFTYFDLPGGDRAGIID VPGHEKFINNMVAGVVGMDLVLLVVAADEGIMPQTREHVDILQLLGIENSIIVLNKCDLV DEEWLELVEEEIREELAGTFLEHAPVAKVSAATGDGLPELISIIEQMTRDEVVPKDIHTI ARLPIDRAFTLSGFGTVITGTLVSGTITKEDTLEMYPVGKPCKIRSIQVHGRDVKECFAG QRVAINLSNVKKREIKRGCVLAPSDSMKETDLLDVRLDVLESSMRVLTHHARLHLFTGTS EVLCRAVLLDADEIGPGESGYVQLRLEEKIAVRRSDKFVVRFYSPMETIGGGVVLEPNPG VKKRFREDAIEELRRKESGSSTDVIELHVKEYGASMITLAELARLTALSMEEVQEDVKEL EAGGTVYTFAMRKDTYVWHADACREAAGKITKALSSYEEKYPYRYGMKKAEVQMTYFQKM KPNVFDKAVERLTAEGQIKRVDEFLCTPEFEICRDETYDKTAGLLLGAFKTAGYDFVRYS EIDMKGTGRETADDILNILLEEEQVVKVADDMYTMKSYMDEAREIISGKLAEHPVITIAE VRDLFGTSRKSAKPILEYMDSIRVTKKTGAESERVAY >gi|224461043|gb|GG657761.1| GENE 254 287423 - 288331 934 302 aa, chain + ## HITS:1 COG:aq_638 KEGG:ns NR:ns ## COG: aq_638 COG0583 # Protein_GI_number: 15606065 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Aquifex aeolicus # 1 293 2 290 303 133 29.0 3e-31 MNLKQLEAFVQVAEGGSFSKAAKELYLTQPTVSAHISSLEKELNVRLFVRNTKEVSLSDD GRELYKYARQMIDLESQIEEKFGSSRKEKRQCITIAASTIPSQYLLPKVLIKFSEKYPEE QLKLIETDSSKVIAQIVDHLAEVGFTGTVLEKKHCKYIPFYKDELVIIAPNTEKYRQIKE EGGDDISWIRKEHVIMREEGSGTRKEAGKQLRRAGVELSDLDIIASIENQETIKKSVRQG MGISILSRLATADEAADGHLLVFPIPYADEGRNINLVYNKNYQLSRSAERFIRVVKSIYQ GK >gi|224461043|gb|GG657761.1| GENE 255 288468 - 289604 1126 378 aa, chain + ## HITS:1 COG:CAC2354 KEGG:ns NR:ns ## COG: CAC2354 COG0520 # Protein_GI_number: 15895621 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 1 375 1 374 379 337 45.0 2e-92 MIYMDNAATTMQKPKEVLDAVLNAMSSMGNAGRGANEASLSASRIIYDTREKLCTLFHAE DPRQIVFTANSTESLNVALKGLLNPGDHVVTTMLEHNSVLRPLYELEEQGTELTIVKSSS LGTVEPEDIEAAVRPDTKLIVITNGSNLTGNYIDLMPIGDIARKHNVLFVVDASQTAGVF PIDVQEMKIDVLCFTGHKGLLGPQGTGGMYVREGLAVRPLKSGGSGVRTFSRTHPAEMPT ALEAGTLNGHGIAGLNAALAYLEKEGIDNIRRREQELMRKFYDGVKDIPDVKVYGDYSAK ERCAIVALNIGDYDSSEVSDELLTTYGISTRPGGHCAPLMHEALGTVEQGAVRFSFSHYN TDEEVDTAIAAIRELAED >gi|224461043|gb|GG657761.1| GENE 256 289659 - 290756 273 365 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167854911|ref|ZP_02477687.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis 29755] # 200 360 1 148 151 109 38 1e-22 MNLSDSKKKLALAGVVCGLVAACLAYFGNPANMAFCIACFIRDTAGALGMHQAEVVQYAR PEIIGLVLGAFIISAATKEYRSTAGSSPMTRFVLGLIIMTGSLVFLGCPLRMVIRMSAGD LNAWVALIGFILGVGSGVIALKKGFSLGRAHVTNKAAGTVLPVIMLGILILSVGTSLLKA SVTGPGSMHAPLIASLIGGLVFGAFAQKSRMCFAGSIRDIILMKNFDLFSVIAGLFAVML VFNIATGRFVFGFDTPGIIAHSEHLWNILGMYAVGFAAVLAGGCPLRQLILAGQGSSDSA VTVIGMLVGAAICHNFGLAASGTAVNAETGETVAGAVPFYGKVACIICIAACFVIAFTNK REEAK >gi|224461043|gb|GG657761.1| GENE 257 290819 - 291022 369 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571527|ref|ZP_03780523.1| ## NR: gi|225571527|ref|ZP_03780523.1| hypothetical protein CLOHYLEM_07625 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07625 [Clostridium hylemonae DSM 15053] # 1 67 1 67 67 110 100.0 4e-23 MKEVDARGLSCPEPLMLTADALKDAKEAVKVLVTEPHQKMNVEKYAKEHGKSAVSTEREG FFEVVIE >gi|224461043|gb|GG657761.1| GENE 258 291025 - 291261 160 78 aa, chain + ## HITS:1 COG:no KEGG:Shel_25430 NR:ns ## KEGG: Shel_25430 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 1 75 1 75 79 81 54.0 8e-15 MRKKELKLVVTFHTTADAMAMEKACKENGVPGRIIPVPRAISAGCGLSWCADLTEREQIK AMMAKARIEEEDMHECMV >gi|224461043|gb|GG657761.1| GENE 259 291351 - 291938 627 195 aa, chain - ## HITS:1 COG:CAC2605 KEGG:ns NR:ns ## COG: CAC2605 COG1309 # Protein_GI_number: 15895863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 6 191 12 191 194 65 30.0 5e-11 MPRKRQSTKSRIVKAAWNLFYKNGYEQTTVEDIIYASKTSKGTFYHYFKGKEALLNSLSY LFDEKYEELTAVIDPNLSAYDKLLFLNHELFYMIETSVDIKLLALLYSSQLVTKDKKSLS DSKRFYFKWITEILEEGLEKGEFKNTSTAEELMAIYAMFERALLYDWSLFKGKYSLSQYS DKLLPHVLDTFVNGV >gi|224461043|gb|GG657761.1| GENE 260 292057 - 293091 1028 344 aa, chain - ## HITS:1 COG:SMb20268 KEGG:ns NR:ns ## COG: SMb20268 COG3938 # Protein_GI_number: 16264006 # Func_class: E Amino acid transport and metabolism # Function: Proline racemase # Organism: Sinorhizobium meliloti # 19 343 9 332 333 240 40.0 3e-63 MELKANVNFDRFEQALQVVDAHTVGEFCRVVIGGFPEPEGSTMIEKKKWMENNYDHVRTA LMFEPRGHHDMFGAFLCEPVNKEADFGVMFMDTGGYLNMCGHCTIGAVTVAVEAGLVESK EGVNEVVLEAPAGLIRTEAVVKDGKVEHVTLTNVPAFVYKENLSVTIDGKEIPFTISFGG SFFALVDTTKIGIEEISPKTVPDITKLGMKLLDVINKEVPVKHPLLDIDTVDLVEFYGPT PNPDKATMRNVVIFGDAMADRSPCGTGTSAKLATLHHWGEIGVGEEFIYESFIGTTFKGV IKETTKVADYDAVIPMITGSCYLTGVATYLIDPTDPLKYGFQVG >gi|224461043|gb|GG657761.1| GENE 261 293654 - 294982 1194 442 aa, chain + ## HITS:1 COG:TM0244 KEGG:ns NR:ns ## COG: TM0244 COG4656 # Protein_GI_number: 15643016 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Thermotoga maritima # 4 304 47 363 451 136 33.0 9e-32 MGNVQILLRQHVGAPCEAIVKAGDEVKKGTLIATPTGLGANIFSSVYGVVEEVADDRIII KPDEEQKDEFVPIKEGTKLEMVKEAGIVGMGGAGFPTGVKIGTDLKGGYVLVNAAECEPG LRHNIQQIEEQTDITIRGLKYCMEVCNASKGIIAIKKKNEKAIQILREAIKEEDSITIHL LPDIYPMGEERAVVREALGKLLDPTQLPSAADAVVINCETLLRIAEAIELKKPCYSKNMT VIGKLNGGNEPHVFMDVPVGTSVGDMIEKAGGIDGTYGEIIMGGPFTGKSTTLEAPVTKT TGGIIVTVEFPDLHGANVGLLVCACGGSEDRMREICEKMNGKVVSVARCKQAIEPKPGAA LKCENPGNCPGQAQKCLQFKKDGAEFIIIGNCSDCSNTVMGSAPKLKLKTFHQTDHVMRT IGHPLYRRLTVSKEVDQLPNGK >gi|224461043|gb|GG657761.1| GENE 262 295154 - 297010 1159 618 aa, chain + ## HITS:1 COG:no KEGG:CLOST_2234 NR:ns ## KEGG: CLOST_2234 # Name: prdA # Def: D-proline reductase proprotein prda [contains: D-proline reductase subunit beta (d-proline reductase 45 kda subunit); D-proline reductase subunit alpha (d-proline reductase 23 kda subunit)] (EC:1.21.4.1) # Organism: C.sticklandii # Pathway: Arginine and proline metabolism [PATH:cst00330] # 1 617 1 625 629 764 66.0 0 MSITAETAKEHAHDPAVLCCRAEAGVTIEAANLEDPAIFDDLVDSGLLNLDGALTIEQVL GAKLTKTCDSLCPLTADVVEGAKAPSAPAAEEAPAEEAPAAPAPVAPPVAGPAAGGTLKI HIGEGKDIDLEIPVGALGGGAAVAPLPAGAEAVAAGAAAPEAAGEEKVVRSLTRKHFTIT EVKRGPETKIEGTTLYIREGIEADVIADQELVKDFKLEVITPDLYHTYSETIMDVQPIAT KEGDDAVGEGVTRVLDGVVMMLTGVDEGGVQIGEFGSSEGYLDENIMWNRPSCPDKGEIF IKGNIVIQDKTNMERRGPMAAHTAFDLITQEIREVMKKLDESLVADTEELKQVRRPGKKK VVIVKEIMGQGAMHDNFILPVEPVGVLGARANVDLGNVPVCVSPLEVLDGCIHALTCIGP ASKEMSRHYWREPLVLEALHDPEVDLCGVVFVGSPQINAEKFYVSRRVGMTVEAMDADGA FVTTEGFGNNHIDFASHIEQIGMRGTPVVGMSYCAVQGALVVGNKYMSYMVDNNKSEAGI ENEILGNNTLCQEDAVRALAMLKAAMAGEDVKAAEKKWNPNVKSTNVELIEAAAGAKIDL VENEQALPMSQKRKEKYS >gi|224461043|gb|GG657761.1| GENE 263 297026 - 297322 319 98 aa, chain + ## HITS:1 COG:no KEGG:CLOST_2233 NR:ns ## KEGG: CLOST_2233 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 6 89 1 84 86 108 64.0 5e-23 MNNERLNYGDKVIYMEGVIVDIDDCSISVDLKGRLGFFKAPKRMFICDYELKVGQEVGWN MSFPEQLGEEVNDKYISNIEKERRKQEEMRQRMDNKEA >gi|224461043|gb|GG657761.1| GENE 264 297421 - 297777 355 118 aa, chain + ## HITS:1 COG:no KEGG:Toce_1681 NR:ns ## KEGG: Toce_1681 # Name: not_defined # Def: D-proline reductase (dithiol) (EC:1.21.4.1) # Organism: T.oceani # Pathway: Arginine and proline metabolism [PATH:toc00330] # 2 118 34 150 150 184 72.0 1e-45 MSIALATAAGVHKKDQERFNLAGDFTWRKIENTTPSSELMVSHGGYDNSDVNKDINCMFP IDRIHELAAEGFIRACAPVHAGFMGGGGNQEKFKGETGPAIAQMFKEEDVDAVVLTAG >gi|224461043|gb|GG657761.1| GENE 265 298190 - 298957 699 255 aa, chain + ## HITS:1 COG:no KEGG:Clos_0031 NR:ns ## KEGG: Clos_0031 # Name: not_defined # Def: D-proline reductase (dithiol) (EC:1.21.4.1) # Organism: A.oremlandii # Pathway: Arginine and proline metabolism [PATH:aoe00330] # 1 254 1 252 253 313 59.0 6e-84 MAEEVKDLRRLVIKAFHMNDVEWGEHNDISVDGHMTVSKEMIDKLTAEEEHLEKIDIQII KPGDHDRWTNTIMDIIPISTKVLGKLGEGITHTVTGVYVVLTGVDVNGKQCHEFGSSEGK LKEQLYLNRAGTPGDNDYIISFDVTLAAGMGQERPGPTAAHRACDKFIQTYRDKLKKFKG EKCTERHEYHDVVRPGKKRVLIVKQVAGQGAMYDTHLFAKEPSGVEGGRSIIDMGNMPVL VTPNEYRDGIIRSMQ >gi|224461043|gb|GG657761.1| GENE 266 298969 - 299442 652 157 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_3099 NR:ns ## KEGG: CDR20291_3099 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: Arginine and proline metabolism [PATH:cdl00330] # 1 154 1 154 155 210 68.0 2e-53 MGIGPSTKETSLHHFRDPLLDVVSNDTDLDLMGIIIVGTPDDNEDKMLVGTRTAVWAEAM RADGVIISSDGWGNSDVDYTNTCEQLGTRGIAVTGLNFSGTVAQFVVVNDYLDGIVDINK SADGTETNVVGENNMVELDCKKATALLKLKMRKNESR >gi|224461043|gb|GG657761.1| GENE 267 299586 - 299741 272 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEDEKKKKAAAAGETDATAADNDEKLSGTWAADAQDDLEDWIEEQGIQLRY >gi|224461043|gb|GG657761.1| GENE 268 299966 - 300040 59 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVIAVKLLPTISPKNGPAAADSN >gi|224461043|gb|GG657761.1| GENE 269 300365 - 300994 537 209 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571539|ref|ZP_03780535.1| ## NR: gi|225571539|ref|ZP_03780535.1| hypothetical protein CLOHYLEM_07637 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07637 [Clostridium hylemonae DSM 15053] # 1 209 1 209 209 399 100.0 1e-110 MTPIYKVATKHTEEVLKDFIKFSYKVKNPRTGLKLCLFAGCFIILTVAFRDIPSASWSCG IISALILLFVITRRYIAFTKLASVDDNYKNQSDIYFVFGQSGFDVENTEYQEVNNAKYGE ISGSYKDDRNYFIAMNNEELYVLPFKDFNMGDAEAFEKFLESKTKTGVIPLKMPLKERIQ LMNKMRKAAEAEQDRKIEERRKNKSEKKK >gi|224461043|gb|GG657761.1| GENE 270 301057 - 301923 863 288 aa, chain - ## HITS:1 COG:no KEGG:Toce_1675 NR:ns ## KEGG: Toce_1675 # Name: not_defined # Def: integral membrane protein # Organism: T.oceani # Pathway: not_defined # 18 285 16 281 289 237 53.0 5e-61 MNATTILRIIIIVYTAIFAVYWIKDCVAHKEEFTGKKVIPLFIIGAITNFLDTLGIGSFA TTQAGFKFTKSSPDETMPGTLNIGDAIPVVTEFVLFLTLIEMDTLTLVLLIIAAVVGSYI GAGIVSKMPVKQIRIALGAALIALAIIMGCRLLSVGPFGAVGTATGLTGIKLVIGIVVNF FLGAFMTIGVGLYAPCMAMIGALGMNIQAAFPVMMGSCAFLMPACGIKFIREGKYDRKAS VLLTVGGVIGVLIAYFLVKSMPMTVLTWVVIVVMIYTAITFFRDASKS >gi|224461043|gb|GG657761.1| GENE 271 302387 - 304537 1812 716 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571541|ref|ZP_03780537.1| ## NR: gi|225571541|ref|ZP_03780537.1| hypothetical protein CLOHYLEM_07639 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07639 [Clostridium hylemonae DSM 15053] # 1 716 1 716 716 1258 100.0 0 MGTKTGIRTIVITAAAFLLLAAGFLAGRMSMGQRADTGKKDESSVIAVVNLDEGVRLGDR TVNYASNLIHLSGGSYVYAGLEDARNGVYTGEYGAYIVIPAGFSADVESLNTVMSKSNIT FEINEQLVQEKKITILKQVNTFIQSMADNVSLLYVEGILEEFHTAQDSAVRVMENDRKDT AVLLKIKAYDLQAYIEFPQLSQPDMSITALDIQEYILRNGRAIDEIQNEYETGAARGEEG RQKLTEAGTEAKESLDDTNRQIKGLDVTKDTEGNDIYDPGLPSVKRLLADYNTVLESHRD NIQSIMNLIEGNLGELGSYLSGVRHGIEEHNDGLQTAADHIAGVLSNGTYGAGSPPAWTV LDGSVTMDGRTYTLIGAGGTLDTAELDKLLTAYRQNSGGAYKVGDAATDIQDKTGIQAVI LSMLPNCSAERFVEEEDGAFTEGDAQENRKETDRLLADSLAAAETDLTADEDYKIEPVSD EKLGDIMNSIGSDVISPLLNRADEVKNAFHSSYTESEEKLSAFQSSLTAYDPLGYIDRNA VQESYSDMHNSTSSMQKEVQERDTERLDNLVKVYETYTANEVALRQHIQEATKASEDAVE QGLAGAQKVKEENSQSNQELMNSFAGKLPYTRIGKADNLEASRFIVDPFWVTERSATENA GVNSKEEDDEASAGGDEKDASAAGKAVLEALGAAIVLGVILYITITAVMRKKKKDN >gi|224461043|gb|GG657761.1| GENE 272 304585 - 304881 388 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571542|ref|ZP_03780538.1| ## NR: gi|225571542|ref|ZP_03780538.1| hypothetical protein CLOHYLEM_07640 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07640 [Clostridium hylemonae DSM 15053] # 1 98 1 98 98 157 100.0 3e-37 MNIGIKSDDVKTQAQQITGQAMQEYTELRSFLDTIVNSKLPELWQGAGAEAYITRYQELA PSFQAIQDLIQDIGTGLQQNATYYEEADQAASAANSGR >gi|224461043|gb|GG657761.1| GENE 273 304931 - 305386 173 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571543|ref|ZP_03780539.1| ## NR: gi|225571543|ref|ZP_03780539.1| hypothetical protein CLOHYLEM_07641 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07641 [Clostridium hylemonae DSM 15053] # 1 151 1 151 151 260 100.0 2e-68 MGGYMQTEKAQREDTTIEWNPSVITEQKSTTGISLCDLYGVPVFDDRSQEKIQSLENEKI HNIKYIGQQVFVTTSDDEERLDVIRSLVFSETAENTGSKTEKEVSGAGPDGLFWIEIFVA AALAAGYLYAGKLKRERKRRVDNINDMYGGQ >gi|224461043|gb|GG657761.1| GENE 274 305352 - 305588 170 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571544|ref|ZP_03780540.1| ## NR: gi|225571544|ref|ZP_03780540.1| hypothetical protein CLOHYLEM_07642 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07642 [Clostridium hylemonae DSM 15053] # 13 78 1 66 66 127 98.0 3e-28 MIILTICTADNKVKIDVSVKPEQRIRDVLDILSDNGVLAITEPAEGMSVRSWRQKTYVNP YLTFKQAEIRHGDILTVL >gi|224461043|gb|GG657761.1| GENE 275 305635 - 306951 836 438 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571545|ref|ZP_03780541.1| ## NR: gi|225571545|ref|ZP_03780541.1| hypothetical protein CLOHYLEM_07643 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07643 [Clostridium hylemonae DSM 15053] # 1 438 1 438 438 857 100.0 0 MGVKINIDSVLTELNTMNGYLADVRMKSDTLGRAFQSFQDDVGLESTAYNNHKSYVGLMH QPVAGGIFNFCSEMTEANQNYSNCLCQYFSTGTVVDEDKWRSEYEALKVQYDQLNSCLSF IMETIRSILGNGRPLSVHKDISGYQHIANSYREELDTLYEIIEEYRRNIEKIGEMLAATS GIYAGAQTMQKALASAVSAMQGVRYNAATNQYAIAPVNLQLFADIEGTWQTVLISKELKK QLGDELLEEEEFMALDAEEQLEYADKVARIIGKYIPNLSVQLLDGEMEIPLADGLVLYGG VEKSIETNLDNPQSVEVAISKNREILAEWGVKSGNLEWKGNNIEVGIKRSFELDSKSTAY TQVTFSKENVSTKIEWGATTICEEINHVTSKVGLEYRPTNSDFKMEAYELEPADAPRKTF EATGILFPLPSGVPVPIG >gi|224461043|gb|GG657761.1| GENE 276 306964 - 307650 285 228 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571546|ref|ZP_03780542.1| ## NR: gi|225571546|ref|ZP_03780542.1| hypothetical protein CLOHYLEM_07644 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07644 [Clostridium hylemonae DSM 15053] # 1 228 1 228 228 409 100.0 1e-113 MEKLKRAVSFISLAALVLLLLYVKYAYERGAELWPAKTKLSKDEVRIERKIKIPEGETKE FIQPAFLVRLSYSSTETPEDVIEDLEKGNYGHDWYEKARLNEDGTLSMTVTGKQLEHWIS TREDGINKRIVNNKNKDMEIKINEDFTEVTYILKKGYEISFLEWAIDGVVILGCLLEAQV FTGVPPEDCHVREVVKREEDGVVIIDAVTPGTNYEVTEREWYGEEQKK >gi|224461043|gb|GG657761.1| GENE 277 307750 - 308901 946 383 aa, chain + ## HITS:1 COG:lin0053 KEGG:ns NR:ns ## COG: lin0053 COG4499 # Protein_GI_number: 16799132 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 18 383 24 396 398 134 27.0 2e-31 MGKNEETTKGSTIVLEETVHKTQMKASAAYDYHRLQAETYYFVPCKVEEKEESLCFTYEL DGMTPLKEVKKSDRELIYSILIQAGELGEKARAFNFSLEPENLYYDAQYRLHVLRRDILE DGAVKDYFKEFQALAGALLQKKYNYSDYLNGGMDLLDRQEETRRILQWNSMDDALKDLSQ RQRGLRSYERTHLCTIKKSRYRGMKAGMILFLVLAAAALAYLLYQHYKLIAPQRAALTAQ RAYVESDYVAVIDSLKEVQPDALDVHEKYILAVSYIKGQAVDNFSSEAKDNILSRLNVKG DASVMDYWIYLGRLETKEAEDIALKMSDNQLLLYAYLQERDQVSRDSSLKGDEKAARMET LDGEIDKLAEKLGIQYDMSTEEE >gi|224461043|gb|GG657761.1| GENE 278 308906 - 313189 3169 1427 aa, chain + ## HITS:1 COG:lin0054 KEGG:ns NR:ns ## COG: lin0054 COG1674 # Protein_GI_number: 16799133 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Listeria innocua # 80 1186 131 1248 1498 905 42.0 0 MNYNLVEKDDWYEEYPQGGQYEKVKQEGQVISLKNEKQVFARETCLYIGRCGNIVIDKCR LELCIEGREVHVIGDLEKEKIYHNRKRVRDNSFLLEEGDVLLIRHTKVILFERKIAVIGD NKAYTSSLPELQEPEVPFDGFPYYKRSPRIIRRIASEEAEIQAPPQKAGVSRSNLLQTLL PPLGMMAVTVGIGLLMGRGMFLLMSVGGTGMTVIVAVIRFISDRKERKETDKKRRKLYEQ YLLRKRKEIYELYRQEEEAYRYNFPPVIEIQKMVRQYSSRIYERSSSDEDFLTITVGRQI KKPAFKLRTKDNELAMNKDELDKEASRIAALYDWIEKECVVDLKKAHLGLVGTKAAIHEQ LKIYISQLAAFQSYHDLQIVVVYDGRYEEEFSWMHWLPHNKIQSLNVQGLIHSERVRDQI LNSMNQILKERQVKLDESKKESRFIPHFLFIIDEPKLIIDHSIMEYLQGEGKNLGFSIIY TSYLQANLPENIGTVLLLEQSGTGRLLLEEKELKDDKLTLQRLEGCDLEAMARDLGVLKH IQGVTSHLPDSITFFQMYHVRRPEELDIRSRWQEGGAHKSLAVPLGVRAEDDIVYLNLHE KAHGPHGLIAGTTGSGKSEVIQSYILSLAVNFHPYEVGFLIIDYKGGGMANLFRDLPHLL GTITNLDGTESLRAMSSIRAELKRRQRIFKDNGVNSINAYSSLFKEGKVKEPLPHLFLIS DEFAELKKAQPEFMKELVSVAAIGRSLGVHLILATQKPSGVVDDQIWANSRFKLALKVQN EADSKEIIKTPDAAGITQAGRAYLQVGSNEIYELFQSAWSGADYIEEQEEEITMDDRVYL MNELGQGVLVNRDLSGTRAEKKAKETQLDVTVRHIREVYEGEIHTEVKKPWLPSLGKKLL SPLAAAEGRHEREEGSIVIPIGLMDVPKEQRQTVYELNLPEDGNIMYIASSGYGKSVFLT TAGLSLAMSYRVRELNLYILDFGNNALISLRNLPHTSEYISIEDTERYDKFKELMSEEVR YRKRRLSSVMAPNFQVYNEMSEEKMRAVVVLADNFDAVKELGFDEEEYFTRLTRDGAGVG IYFIITASRINAVRAATCNNFKNKLAGYNFESGEVTNVVGRCKYKLPEIRGRAFVKREDD VNMIQIYTMAVFEKAAEYTSNIRKLVKSIREMYPGEEAEHIPVLPEEFSADMMCAYEKEE ADLYLGLEKKKVILSGFSRLCSPFFILGEGGKGKTNALKILIEQAAGTGEVVLFDAADMG LFGYAARKDVRYVKGLEAFIAYMDELEQEVKSREKQQRESLESTPGIAPWETLREMPPYY IFIDDLDNFPAYETDSIPEIAAMFRRACNAGITMIITGHTGKLKGTDELTRFVKSVADGL MVSSQGFLGIMPVPAGADHVAFTEGLLFHNGTYKELLLPRAVERTDC >gi|224461043|gb|GG657761.1| GENE 279 313210 - 313473 239 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571549|ref|ZP_03780545.1| ## NR: gi|225571549|ref|ZP_03780545.1| hypothetical protein CLOHYLEM_07647 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07647 [Clostridium hylemonae DSM 15053] # 1 87 9 95 95 154 100.0 3e-36 MDIKSSLGSALALRSNIVSAGNNIILPGAGSAAASGVPAQIECEQTYQAMQGCLNSYNEI VQRDGEHVAQIAHALDTVDQKIRGQYK >gi|224461043|gb|GG657761.1| GENE 280 313507 - 313875 262 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571550|ref|ZP_03780546.1| ## NR: gi|225571550|ref|ZP_03780546.1| hypothetical protein CLOHYLEM_07648 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07648 [Clostridium hylemonae DSM 15053] # 1 122 1 122 122 147 100.0 3e-34 MGEMDKYCEEYEERRRELELKLAETEEELKKMEYCREEARHRHRDIFALLGRIVSEGNGD EFSRRIESRAEKVRRCADAAGAQMDEQVYTLRKECRRLKESIEIYELEYVKAAGDGENNE DS >gi|224461043|gb|GG657761.1| GENE 281 314189 - 314506 512 105 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145879|ref|ZP_04744480.1| 30S ribosomal protein S10 [Roseburia intestinalis L1-82] # 1 105 1 105 105 201 96 3e-50 MASQVMRITLKAYDHQLVDASAKKIIETVKKNGSQVSGPVPLPTKKEVVTILRAVHKYKD SREQFEQRTHKRLIDIITPTQKTVDALSRLEMPAGVYIDIKMKNK >gi|224461043|gb|GG657761.1| GENE 282 314581 - 315261 941 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656] # 1 225 1 225 227 367 78 1e-100 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQVKTAENDGYDAVQVGFVDKKEKT VNKDKSGKKEIVHRHGVTKAEQGHFAKAGVSGKRFVREFKFENASEYELAQEIKADIFEA GDKIDATAVSKGKGFQGAIKRHNQHRGPMTHGSKFHRHAGSNGAASDPSKVFKGKKMPGH MGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKKSLVTIKEAVKAV >gi|224461043|gb|GG657761.1| GENE 283 315291 - 315911 830 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238922831|ref|YP_002936344.1| ribosomal protein L4/L1e [Eubacterium rectale ATCC 33656] # 1 206 1 206 206 324 77 3e-87 MANVSVYNIEGKEVGTIDLNDAVFGVEVNEHLVHMAVVSQLANKRQGTQKAKTRSEVSGG GRKPWRQKGTGHARQGSTRAPQWTGGGVVFAPTPRDYSFKMNKKEKRAALKSALTTKVEE KKFIVVDEIAFDEIKTKNFANVLKNLDVSKALVVLEDGNTNAELSARNIADVKTAKTNTI NVYDILKYNTVIATKAAVANIEEVYA >gi|224461043|gb|GG657761.1| GENE 284 315911 - 316216 380 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145876|ref|ZP_04744477.1| 50S ribosomal protein L23 [Roseburia intestinalis L1-82] # 1 101 1 99 99 150 75 5e-35 MADIKYYDVILKPVVTEKSMELMGDKKYTFLVHPQATKSQVKEAVEKMFDGAKVKNVNTM NCDGKKKRVRGTMQFGKTAKTKKAVVQLTEDSKDIEIFEGL >gi|224461043|gb|GG657761.1| GENE 285 316299 - 317141 1282 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145875|ref|ZP_04744476.1| 50S ribosomal protein L2 [Roseburia intestinalis L1-82] # 1 280 1 281 281 498 83 1e-139 MGIKTYNPYTPSRRQMTGSDFAEITKTTPEKSLLAPKSRQAGRNNQGKITVRHRGGGAKK KYRIIDFKRRKDGIPATVVGIEYDPNRTANIALICYADGEKAYILAPEGLKAGMKVMNGP EAEVKAGNCLPLSEIPVGTQIHNIEMYPGKGGQLVRSAGNSAQLMAKEGKYATLRLPSGE MRMVPIICRASVGVVGNGDHNLINIGKAGRKRHMGFRPTVRGSVMNPNDHPHGGGEGKTG IGRPGPCTPWGKPALGLKTRKKNKASNKMIVRRRDGKAIK >gi|224461043|gb|GG657761.1| GENE 286 317163 - 317444 464 93 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145874|ref|ZP_04744475.1| 30S ribosomal protein S19 [Roseburia intestinalis L1-82] # 1 93 1 93 93 183 95 9e-45 MARSIKKGPFADASLLKKVDAMNASGDKSVIKTWSRRSTIFPSMVGHTIAVHDGRKHVPV YVTEDMVGHKLGEFVATRTYRGHGKDEKKSKVR >gi|224461043|gb|GG657761.1| GENE 287 317475 - 317861 596 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145873|ref|ZP_04744474.1| 50S ribosomal protein L22 [Roseburia intestinalis L1-82] # 1 128 1 128 128 234 91 5e-60 MAKGHRSQIKRERNANKDTRPSAKLSYARVSVQKACFVLDAIRGKDVTTALGILTYNPRY ASSLIKKLLESAIANAENNNGMNAENLYIAEAYANKGPTMKRIRPRAQGRAYRIEKRMSH ITLVLDER >gi|224461043|gb|GG657761.1| GENE 288 317873 - 318529 984 218 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145872|ref|ZP_04744473.1| SSU ribosomal protein S3P [Roseburia intestinalis L1-82] # 1 215 1 215 218 383 86 1e-105 MGQKVNPHGLRVGVIKDWDSKWYAEKEFADYLVEDHDIRTYLKKRLYSAGISDIEIERAS DRVKIIIYTAKPGVVIGKGGVEIEKVKGELKRFTDKKLVVDIKEIKRPDKDAQLVAENIA QQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRAD IDYGFAEANTTYGKVGVKVWIYKGEVLPEKAAKEGSDK >gi|224461043|gb|GG657761.1| GENE 289 318529 - 318966 678 145 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160881778|ref|YP_001560746.1| 50S ribosomal protein L16 [Clostridium phytofermentans ISDg] # 1 145 1 145 145 265 89 1e-69 MLMPKRVKRRKQFRGSMKGKALRGNKITNGEYGIVAMEPCWIRSNQIEAARIAMTRYIKR GGKVWIKIFPDKPVTTKPAETRMGSGKGTLEYWVAVVKPGRVMFEIAGVSEEVAREALRL ATHKLPCKCKVVSRADLEGGDNSEN >gi|224461043|gb|GG657761.1| GENE 290 318947 - 319165 300 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239623355|ref|ZP_04666386.1| 30S ribosomal protein S17 [Clostridiales bacterium 1_7_47_FAA] # 1 70 1 70 70 120 88 1e-25 MITVKINAFVEDLKTKSAAELNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRRNIARI QTVITEKANAAE >gi|224461043|gb|GG657761.1| GENE 291 319186 - 319440 377 84 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160881776|ref|YP_001560744.1| ribosomal protein S17 [Clostridium phytofermentans ISDg] # 1 84 2 85 85 149 86 1e-34 MERNLRKTRVGKVVSNKMDKTIVVAVEDHVKHPLYKKIVKRTYKLKAHDEANECNIGDKV KVMETRPLSKDKRWRLVEVMEKVK >gi|224461043|gb|GG657761.1| GENE 292 319460 - 319828 557 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160881775|ref|YP_001560743.1| ribosomal protein L14 [Clostridium phytofermentans ISDg] # 1 122 1 122 122 219 90 2e-55 MIQQESRLKVADNTGAKELLCIRVLGGSTRRYASIGDIIVATVKDATPGGVVKKGDVVKA VVVRTVNSTRRKDGSYIRFDENAAVIIKDDKTPRGTRIFGPVARELREKQFMRIVSLAPE VL >gi|224461043|gb|GG657761.1| GENE 293 319844 - 320155 420 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145867|ref|ZP_04744468.1| 50S ribosomal protein L24 [Roseburia intestinalis L1-82] # 1 103 1 103 103 166 75 1e-39 MSMKKIKKGDTVKVIAGKDKDKEGKVVAVNQKDGKVTVEGVNMLTKHTKPSASNQNGGII HQEGPIDVSNVMYVHKGQATRVGFKTEGEKKVRYAKSTGEVID >gi|224461043|gb|GG657761.1| GENE 294 320173 - 320718 814 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145866|ref|ZP_04744467.1| 50S ribosomal protein L5 [Roseburia intestinalis L1-82] # 3 181 1 179 179 318 86 2e-85 MTLSRLKEQYQNEIVEAMNKKFGYKNIMEVPKLDKVVINMGVGEAKDNAKILESAVADLE KITGQKAVICKAKKSVANFKLREGMPIGCKVTLRGEKMYEFVDRLVNLALPRVRDFRGVN PNAFDGRGNYALGIKEQLIFPEIEYDKVDKVRGMDIIFVTTAKTDEEARELLTQFNMPFT K >gi|224461043|gb|GG657761.1| GENE 295 320730 - 320915 302 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|158319556|ref|YP_001512063.1| ribosomal protein S14 [Alkaliphilus oremlandii OhILAs] # 1 61 1 61 61 120 85 6e-26 MAKTAMKVKQQRKQKFSTREYNRCRICGRPHAYLRKYGICRVCFRELAYKGQIPGVKKAS W >gi|224461043|gb|GG657761.1| GENE 296 320936 - 321337 591 133 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145864|ref|ZP_04744465.1| ribosomal protein S8 [Roseburia intestinalis L1-82] # 1 133 1 133 133 232 86 2e-59 MTMSDPIADMLTRIRNANTAKHDTVDVPASKMKTAIANILLDEGYIEKYDIVEDGVFKTI HITLKYGADKNEKVITGLKRISKPGLRVYASQAELPKVLGGLGTAIISTNQGVITDKEAR KLGVGGEVLAFIW >gi|224461043|gb|GG657761.1| GENE 297 321420 - 321962 804 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|160881770|ref|YP_001560738.1| ribosomal protein L6 [Clostridium phytofermentans ISDg] # 1 180 1 180 180 314 83 4e-84 MSRIGRLPVAVPAGVTVEIAENNKVTVKGPKGTLEKELPAEMEIKQEGDQIIVTRPNDLK KMKSLHGLTRTLVNNMVVGVTDGYQKVLEVNGVGYRAAKSGNKLTLSLGYSHPVEMTDPE GVETVMEGQNKIIVKGIDKEKVGQYAAEIRDKRRPEPYKGKGIKYADEVIRRKVGKTGKK >gi|224461043|gb|GG657761.1| GENE 298 321980 - 322348 494 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239623363|ref|ZP_04666394.1| ribosomal protein L18 [Clostridiales bacterium 1_7_47_FAA] # 1 122 1 122 122 194 78 3e-48 MVSKKSRSKVRVNKHRKLRNRFSGTSECPRLAVFRSNNHMYAQIIDDTVGSTLVAASTLQ KDVKANLEKTNDVKAAAYLGKVIAEKAIEKGIKDVVFDRGGFIYQGKVQALADAAREAGL NF >gi|224461043|gb|GG657761.1| GENE 299 322363 - 322872 701 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145861|ref|ZP_04744462.1| ribosomal protein S5 [Roseburia intestinalis L1-82] # 1 169 1 169 169 274 84 3e-72 MKQVRIDAGQLELNEKVVSIKRVTKVVKGGRNFRFTALVVVGDGNGHVGAGLGKATEIPE AIRKGKEDAAKNLITVALDENDSITHDFIGKFGGASVLLKKAPDGTGVIAGGPARAVIEM AGIKNIRTKSLGSNNKQNVVLATIDGLRQLKTPEEVAKLRGKSVEEILG >gi|224461043|gb|GG657761.1| GENE 300 322887 - 323066 213 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168334334|ref|ZP_02692521.1| 50S ribosomal protein L30 -related protein [Epulopiscium sp. 'N.t. morphotype B'] # 1 59 1 59 61 86 72 1e-15 MANLKVTLVKSTIGAVPKHKKTVEALGLKKLNKTVELPDNAATRGMIKQVCHLVKVEEV >gi|224461043|gb|GG657761.1| GENE 301 323094 - 323534 633 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238922848|ref|YP_002936361.1| 50S ribosomal protein L15 [Eubacterium rectale ATCC 33656] # 1 146 1 146 146 248 84 2e-64 MDLSNLRPADGAKQSDNFRRGRGHGSGNGKTAGKGHKGQKARSGATRPGFEGGQMPLYRR IPKRGFTNRNSKDIVGINVSALEVFDNDAVVTVETLLEQGIVKNPKDGVKILGNGELTKK LTVQANAFSAGAAAKIEALGGKAEVI >gi|224461043|gb|GG657761.1| GENE 302 323534 - 324850 848 438 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 13 436 22 437 447 331 40 3e-89 MLETFRKAFQIKDIRKKIGYTFLMLIVIRIGSELPTPGVDPSYIKDFFAQNTGEAFNLFN AFTGGSFEQMSVFALSITPYITSSIIMQLLTIAIPKLEEMQKEGEDGRKKIVAITRYLTV ALALIESTAMAVGFGRRGLLVEYNFVNAAIVVLTLTAGSALLMWIGERITEKGVGNGISI VLVINIISRIPNDMSTLFEQFVKGKSLASGGLAVVIIFAIILALVVFVIVLQDGERRIAV QYSQKVVGRKTFGGQSTHIPLKINTAGVIPIIFASSLMQFPIVIASFLGKDGGTGIGSEI LRGMNQGNWCNPEHLKYSWGLLVYIILTVFFAYFYTSITFNPLEIANNMKKSGGFIPGIR PGKPTVEYLTRILNYIIFVGACGLVLIQIVPIFFNGWLGAKVSFGGTSLIIIVSVVLETL KQIESQMLVRNYKGFLNN >gi|224461043|gb|GG657761.1| GENE 303 324916 - 325560 706 214 aa, chain + ## HITS:1 COG:CAC3112 KEGG:ns NR:ns ## COG: CAC3112 COG0563 # Protein_GI_number: 15896362 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Clostridium acetobutylicum # 1 213 1 213 215 273 61.0 2e-73 MKIIMLGAPGAGKGTQAKKIAAKFSIPHISTGDIFRANIKNGTELGKKAKTYMDQGLLVP DELVVDLVVDRVNQEDCRDGYVLDGFPRTIPQAEALDKALAELGQKVDYAIDVDVPDENI IRRMGGRRACVTCGATYHLEYAPTEKDGICDTCGGGLILRDDDKPETVKKRLSVYHEQTQ PLIDYYTNAGILKTVDGTADIEDVFRAIVEILGA >gi|224461043|gb|GG657761.1| GENE 304 325566 - 326321 663 251 aa, chain + ## HITS:1 COG:BH0156 KEGG:ns NR:ns ## COG: BH0156 COG0024 # Protein_GI_number: 15612719 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus halodurans # 3 248 2 246 248 250 50.0 1e-66 MPISIKSGREIELMTEAGRILEIVHNELAKELHPGMSTKDIDVLGEEVIRSYGCIPSFLN YNGYPASVCVSVNEEVVHGIPDSHRILKDGDIVSLDAGVIYKGYHSDAARTHGIGELSKE AEKLVEVTRESFFEGIKYAKEGNYLFEISAAIGRYAESFGYGVVRDLCGHGIGTNLHEAP EIPNYEMNRKGVKLKAGMTLAIEPMINAGTWEVDWLDDDWTVVSRDGSLSAHYENTVLIT DDEPKLLTLSK >gi|224461043|gb|GG657761.1| GENE 305 326345 - 326608 311 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571576|ref|ZP_03780572.1| ## NR: gi|225571576|ref|ZP_03780572.1| hypothetical protein CLOHYLEM_07674 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07674 [Clostridium hylemonae DSM 15053] # 1 87 1 87 87 135 100.0 8e-31 MEEVKTGMLAKSKAGHDKGQVYVIVDTDDAYVYLADGKIRTLGRLKKKKKKHVQPILREF DMTAADDAAIKQILKNFNKEKKNQEDL >gi|224461043|gb|GG657761.1| GENE 306 326610 - 326828 268 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 107 68 5e-22 MSKADVIEIEGKVVEKLPNAMFQVELENGHQVLAHISGKLRMNFIKILPGDKVTLELSPY DLSKGRIIWRDK >gi|224461043|gb|GG657761.1| GENE 307 326935 - 327066 190 43 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146297261|ref|YP_001181032.1| ribosomal protein L36 [Caldicellulosiruptor saccharolyticus DSM 8903] # 1 43 14 56 56 77 79 6e-13 MKGGFDVKVRSSVKPICEKCKVIKRKGSVRIICENPKHKQRQG >gi|224461043|gb|GG657761.1| GENE 308 327580 - 327948 552 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145852|ref|ZP_04744453.1| ribosomal protein S13p/S18e [Roseburia intestinalis L1-82] # 1 122 1 122 122 217 87 6e-55 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILSEAGVSPDIRCRDLTDEDVKKISAVI DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK KK >gi|224461043|gb|GG657761.1| GENE 309 327994 - 328389 641 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239623373|ref|ZP_04666404.1| ribosomal protein S11 [Clostridiales bacterium 1_7_47_FAA] # 1 131 1 133 133 251 96 3e-65 MAKKVTKKVTKKRVKKNVERGQAHIQSSFNNTIVTLTDAQGNALSWASAGGLGFRGSRKS TPYAAQMAAETAAKAALVHGLKSVDVMVKGPGSGREAAIRALQACGIDVTSIKDVTPVPH NGCRPPKRRRV >gi|224461043|gb|GG657761.1| GENE 310 328480 - 329073 834 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145850|ref|ZP_04744451.1| 30S ribosomal protein S4 [Roseburia intestinalis L1-82] # 1 197 1 197 197 325 80 1e-87 MAVNRVPVLKRCRSLGMDPIYLGIDKKSNRQLKRSNRKMSEYGLQLREKQKAKFIYGVLE KPFRNYYTKAKQMSGMTGENLMILLESRLDNVVFRMGLARTRREARQIVDHKHVMVNGKQ INIPSYIVKAGDVVEIKEKHKSSPRYKGILEVTGGRLVPDWLEVDTENLKGTVKELPARD AIDVPVDEMLIVELYSK >gi|224461043|gb|GG657761.1| GENE 311 329104 - 330063 801 319 aa, chain + ## HITS:1 COG:BH0162 KEGG:ns NR:ns ## COG: BH0162 COG0202 # Protein_GI_number: 15612725 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus halodurans # 1 318 1 314 314 385 67.0 1e-107 MFDFNKPNIEITEISEDKKYGRFVVEPLERGYGTTLGNSLRRIMLSSLPGSAISQVKIDG VLHEFSSIPGVKEDVTEIVMNLKSLAIKNTSETDEPKTAYIEFEGEGVVTAADIQVDQDI EIMNPETVIATLNGGADSKLYMELTITKGRGYVSADKNKNDELPIAVIPIDSIYTPVERV NLTVENTRVGQITDFDKLTLDVYTNGTLLPDEAVSLAAKVLSEHLKLFIDLSEVAQAAEV MIEKEDDEKEKVLEMSIDELELSVRSYNCLKRAGINTVEELTNRTPEDMMKVRNLGRKSL EEVLAKLDELGLCLSRGEE >gi|224461043|gb|GG657761.1| GENE 312 330174 - 330710 786 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|240145848|ref|ZP_04744449.1| LSU ribosomal protein L17P [Roseburia intestinalis L1-82] # 1 178 1 178 178 307 87 4e-82 MAKYRKLGRTSSQRKALIRNQVTALLNNGKIVTTEAKAKEIRKVAEGLIAMAVREKDNFE EVTVKAKVARKDKDGKRVKEVVDGKKVTVYDEVEKKVKKDMPGRLHARREMMKVLYPVKE VPAAQAGRKKNTKEVDLVAKMFDEIAPKYTGRNGGYTRIVKIGQRKGDAAMEVLLELV >gi|224461043|gb|GG657761.1| GENE 313 330787 - 330999 75 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571584|ref|ZP_03780580.1| ## NR: gi|225571584|ref|ZP_03780580.1| hypothetical protein CLOHYLEM_07682 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07682 [Clostridium hylemonae DSM 15053] # 16 70 1 55 55 96 100.0 6e-19 MTNPATFSYAPLWETMKKKNVSTYKLITTYNFNKGTIYHLKRGDNVTISTLAILCQILEC SISDIVEIKY >gi|224461043|gb|GG657761.1| GENE 314 331267 - 331737 305 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571585|ref|ZP_03780581.1| ## NR: gi|225571585|ref|ZP_03780581.1| hypothetical protein CLOHYLEM_07683 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07683 [Clostridium hylemonae DSM 15053] # 1 156 42 197 197 298 100.0 7e-80 MIVPTIAIISVCIIYMVSGIFSTEPVDSKHLKSGVSKAEGDSVGQNNEEPEAAVSSSDKV INEQTAAKAVGAFLQSDNLKTLSTTEYYEVRGDEAYRYNEMIYVPIYAPTGDRGLQFIYV AVANPASAFGDTTIFYEGEELQSGERLEEFQAYDYL >gi|224461043|gb|GG657761.1| GENE 315 331773 - 332243 140 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571586|ref|ZP_03780582.1| ## NR: gi|225571586|ref|ZP_03780582.1| hypothetical protein CLOHYLEM_07684 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07684 [Clostridium hylemonae DSM 15053] # 1 156 1 156 156 290 100.0 2e-77 MAFLEDIDRTLTALGQGALQKTKEISNHAKVSITIKSLEEQKKESFVELGSIYYSLHKKD RDSLTEEFSQIVNRIYELDRQIEELKEQIISESYCPNCNTAIPLNSVFCNVCGTRVKEAA LDNDGMLSAEQKKCSQCGNEIDEHQLFCTYCGRPVK >gi|224461043|gb|GG657761.1| GENE 316 332197 - 333288 478 363 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571587|ref|ZP_03780583.1| ## NR: gi|225571587|ref|ZP_03780583.1| hypothetical protein CLOHYLEM_07685 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07685 [Clostridium hylemonae DSM 15053] # 26 363 1 338 338 608 100.0 1e-172 MSISCSALIAGDQSSEIQFVFKEKKMICKECNTENPQGAKFCLKCGKELEQEQIQNVYKK KTRKTLYISIITLVICITALMGFKVYSDTKNYNAAIKRAERFYASGKYDDAVREYEKAMD ILPENGKAYTGLAYLYRDLGEFSNSYNILETANEEGIKTEQEVEELKEYEEKYNFLMNMS DNIYSGRYQEVYDTLESVTADEYGQLYMQNGKIVEKIEDGPGIIFNVADGIYVGDIMDGF RNGNGIQIGYYNESYYYADGLWEEDMVNGECTLYYDNYGGEQANEMYVVGNYTNNLMDGE MEMRWRKKGEEDYSSGTARAVAGEFKSLGKTDDDKLIYVRGDSTYWSTSASGLKDNGVPF LPE >gi|224461043|gb|GG657761.1| GENE 317 333330 - 333470 65 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571588|ref|ZP_03780584.1| ## NR: gi|225571588|ref|ZP_03780584.1| hypothetical protein CLOHYLEM_07686 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07686 [Clostridium hylemonae DSM 15053] # 1 46 1 46 46 72 100.0 1e-11 MEDPLKLLISIAHIAEFLNFLTQQHYQIQYRYQRSVRVQKKILGMA >gi|224461043|gb|GG657761.1| GENE 318 333467 - 333886 226 139 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571589|ref|ZP_03780585.1| ## NR: gi|225571589|ref|ZP_03780585.1| hypothetical protein CLOHYLEM_07687 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07687 [Clostridium hylemonae DSM 15053] # 1 139 1 139 139 198 100.0 9e-50 MSAVDILICIMYALMILRWTRVFLTNIKSTWNYFKFIDKDTGLIGLLVYTAVFAILIFTC VMGINSVKHHVYHISMGFIIIGFAVLIKTGMLIFDGTLFDSTQMIAYQIVYVYGKITVGT IVLGILISFLLYTKIDKKV >gi|224461043|gb|GG657761.1| GENE 319 333911 - 334627 556 238 aa, chain + ## HITS:1 COG:FN1803 KEGG:ns NR:ns ## COG: FN1803 COG1309 # Protein_GI_number: 19705108 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 25 212 3 194 217 125 33.0 8e-29 MISLDFVSARDYNEANLIDRGADMKENISKEQFIKATYEILSKEGIQALSIRRLGKVMDC NPANIYRYFTGMDELVLYASLQFLRGYLKDVASCFERIQDGLKLHFAVWRCFAESSFERP EIFDNLFFGKYSARLDQIMKEYYQMYPEELDMIGKGKEVIFIDGDFSHRDYLMIEHCVKD RNLSRSDAKLLNSASIHLYKGYLKDILDERAQGVSADATGKTDEFMKCLEEIVFRFVA >gi|224461043|gb|GG657761.1| GENE 320 334701 - 335738 1231 345 aa, chain + ## HITS:1 COG:AF1665 KEGG:ns NR:ns ## COG: AF1665 COG2423 # Protein_GI_number: 11499255 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Archaeoglobus fulgidus # 23 345 2 319 322 148 32.0 2e-35 MNMDEMLRKEKDRVERKIKIGSEILYLTKDQCIEAGPDTDETLEIIEKTLTAHGNKEYEM PAKIGIHPYDDVFYHAMPAYVPGQMACGEKWIECYPRNPKEYGLPQTSGLMILNEILTGF PLVIMDGAWLTAMRTPAVTSIAAAALHPDAETFGMFGCGVQGIGHVRFIVKKLKNLKKIY VYDVRQESMDRLVEEVKDEISGIEIIKAASPEEVAANCDVMSSATIITRENMAVVKEEWL HAGQTILPCDLNTFWEASIQKNADKYIVDSKDEHVLFDSMGYFPDGLPDIYAETGEIIAG LKPGRERKEERIVCSNIGMSVCDVAMAKFIFDSALERNLGTVMKL >gi|224461043|gb|GG657761.1| GENE 321 335995 - 337797 1844 600 aa, chain + ## HITS:1 COG:CAP0035_1 KEGG:ns NR:ns ## COG: CAP0035_1 COG1012 # Protein_GI_number: 15004739 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Clostridium acetobutylicum # 12 457 3 448 448 586 67.0 1e-167 MAKKKEAVPAVVDSVETLGAKMKAMREAQKVFATYTQEQVDKIFYEAALAANKMRIPLAK QAVEETGRGIVEDKVIKNHYAAEYIYNAYKDTKTCGVIEEDKALGIKKIAEPIGLVAAVI PTTNPTSTAIFKTLICLKTRNAIIISPHPSAKASTIAAAKIVLDAAVKAGAPEGIIGWID VPSLELTNMVMKDADIILATGGPGMVKAAYSSGKPALGVGAGNTPVIIDDTADIRMAVNS IIHSKTFDNGMICASEQSVTVLDSVYDEVKKEFAYRGCYFLKKGEELDKVRKTIIINGAL NNKIPGKSAYEIARLAGVEVPEDTKILIGEVESVDISEEFAHEKLSPVLGMYRAKTFDDA LAKAEQLVADGGYGHTASLYVHPAEQEKIAKHAAAMKTCRILINTPSSHGGIGDLYNFKL APSLTLGCGSWGGNSVSENVGVKHLINIKTVAERRENMLWFRTPEKVYFKKGCMPVALDE LGTVMKKKKAFIVTDSFLYKNGYVAPIEEKLDEMGIQHTCFYEVAPDPTLQCAQKGTDQM KQFEPDTIIALGGGSAMDAAKIMWVMYEHPDVNFEDMAMDFMDIRKRVYTFPKMGKKLTL >gi|224461043|gb|GG657761.1| GENE 322 337908 - 338609 957 233 aa, chain + ## HITS:1 COG:CAP0035_2 KEGG:ns NR:ns ## COG: CAP0035_2 COG1454 # Protein_GI_number: 15004739 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 1 230 181 410 410 266 55.0 3e-71 MAIVDVDNMMTQPKGLTSASGIDVMTHAIEAYVSIMATDYTDGLAMKAVKNVFDYLPSAY ENGANDPKAREMMANASCMAGMAFANAFLGLNHSMAHKLGAFHHLPHGVANAVLLTEVMK YNAAEVPTKMGTFSQYEYPHALARYAELGRFAGCQGKDDQEVLNSFVAKLEDLKEKIGIK KTIKDYGIDEKYFLDTLDDMVEQAFNDQCTGANPRYPLMKEIKELYLKCYYGK >gi|224461043|gb|GG657761.1| GENE 323 338761 - 338844 62 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMTKNKLKKYQKSLFKQRRQVYNDNIK >gi|224461043|gb|GG657761.1| GENE 324 338881 - 339636 820 251 aa, chain + ## HITS:1 COG:no KEGG:Cthe_0424 NR:ns ## KEGG: Cthe_0424 # Name: not_defined # Def: aminoglycoside phosphotransferase # Organism: C.thermocellum # Pathway: not_defined # 1 251 1 249 249 281 58.0 2e-74 MNMEKAALIVERPHKKVYKCEKDIVKVFNPNHPKADVFNEALNTARVEAAGLDIPKVKEV TEIDGRWSIVIEYKDGKTLEEMMLVDAGNLEKYMEDFVDLQLEMHSRKAPLLNKLHDKLA RQINSLKELDATTRYELLTRLDSMPKHDKVCHGDFNPSNVIVGKNGKMTIVDWAHATQGN ASADAAMTYLLFALKNQETADLYLKMFCRKSDTARQYVQQWLPIVAAAQLTKDNELEKDF LMKWIDVMDYQ >gi|224461043|gb|GG657761.1| GENE 325 339734 - 340837 722 367 aa, chain - ## HITS:1 COG:CAC3033_1 KEGG:ns NR:ns ## COG: CAC3033_1 COG3883 # Protein_GI_number: 15896284 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 24 214 22 217 251 71 23.0 2e-12 MKSTKKKRILRAAICLTCAVTIASVNTSVYAEPSTNELEGKTSDLQGELKDLNSQLSTLS DELDATSSKIEELSASVEKSKLDVAAAKLNEDAQYDAMKDRIKFMYEGGSASLLEILFSS ENMADFLNKAEFVSNISTYDRQMLDELQAVRVDIEKKQETLETQQEELAGLQSDLESKQE ALNAKISSTSGELSKYSAQLERAKAAAAALKTAQDNSVAGSTSAPGKNTDNGNKNNNTDG SNGGTVNNGGSIDANVSDTALFAAILECEAGGSYDGMLAVATVIMNRVSSPSYPNSIRGV IYQSGQFAPTWDGSLNRVLARGPSQSAYSAAQAALGGARHAAVLNCYSFNAAWTGASGVN VGGNVFW >gi|224461043|gb|GG657761.1| GENE 326 340952 - 341539 709 195 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571597|ref|ZP_03780593.1| ## NR: gi|225571597|ref|ZP_03780593.1| hypothetical protein CLOHYLEM_07695 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07695 [Clostridium hylemonae DSM 15053] # 1 195 1 195 195 393 100.0 1e-108 MRKYEEEHYRYDNIKDAIYPWIKEELTDSHALNGKHISEKDTPVISFTGGLKIIFVIRRG EDTFEVLKDNMLPPDCNIEELYHKSCENLIRDVEFVIGNTWYGAFAIIADGHHECSSLCF KHIWQVCVDKLKDDIVVMAPTKDMVLFAAAAQEEVVRKMADHGRQAYESSSDKISQSLLL FSKDRKELTVYDKEY >gi|224461043|gb|GG657761.1| GENE 327 341523 - 342350 947 275 aa, chain + ## HITS:1 COG:BH1746 KEGG:ns NR:ns ## COG: BH1746 COG0561 # Protein_GI_number: 15614309 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Bacillus halodurans # 5 274 1 281 282 106 30.0 4e-23 MIKNIKMVAFDLDGTLLTTEKVFTERAGKAITKASERGIVLLPATGRPLGAIPEEILHYP GIRYAITANGGRVVDTVSGNVIYEKPVPPEIARKVLDIYEHYDTLREVYYDGAGFAEEKM LRRIRDFFGVSAMGDYILSTRTPVADIREKFESEGRAVDKVQAVFASLADKQKALEELSE IEGIEVTGALVNNIEVSVQGVNKGNALLALGEMLHIKKEEILALGDGANDIEMLKKAGIG IAMANSSDEVKAAADIVTVSNDEEGVARIIEEYVL >gi|224461043|gb|GG657761.1| GENE 328 342437 - 343264 1054 275 aa, chain + ## HITS:1 COG:L58643 KEGG:ns NR:ns ## COG: L58643 COG1968 # Protein_GI_number: 15674174 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Lactococcus lactis # 2 275 1 284 284 281 56.0 1e-75 MLDIIKVIILGIVEGITEWLPVSSTGHLILVGDVLKPSMSAGFMEMFNVVIQLGAIMAVV VLYFHKLNPFSPKKTGKQKMLTWQMWIKVVIASVPAGVIGILFNDILDELFYKPFPVAVM LILYGALFIIIENRNAHRKPSVNRISDLTVPMLLWIGFFQMLALIPGTSRSGATIVGALI IGVSREIAAEFTFFLAIPAMFGASLIKLIKFGFHFTGAEFGLLMLGCVVSFGLSIVAIRF LMGYIKKHDFKVFGWYRIALGGIIVIYTGVQILLG >gi|224461043|gb|GG657761.1| GENE 329 343805 - 344584 1097 259 aa, chain + ## HITS:1 COG:FN0800 KEGG:ns NR:ns ## COG: FN0800 COG0834 # Protein_GI_number: 19704135 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Fusobacterium nucleatum # 39 252 14 228 230 166 42.0 3e-41 MKLKKLVSVLLVGACVVSLAACGSDKKEKSDDGDKKSKDTLVMATNAEFPPYEFRDGDDV VGIDAEVAQAIADKLGMELKIEDMAFDSIIPAVTSGKADFGAAGLTVTDERKENVDFTDT YAKATQVIMVKEDSKVAGPDDLTGKKIGVQLGTTGDIYAGDIEDAEVERYNKGFEAVQAL QQGKIDAVVIDGEPAKEFVKQAEGIKILDEAFTEEEYALAVDKGNEDLLGKINDALNELK DNGKLDEIVDKYINADDAE >gi|224461043|gb|GG657761.1| GENE 330 344603 - 345295 862 230 aa, chain + ## HITS:1 COG:FN0802 KEGG:ns NR:ns ## COG: FN0802 COG0765 # Protein_GI_number: 19704137 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 13 229 11 236 236 158 47.0 1e-38 MLQTLQDKFVANFITKSRWKYILDGLGVTLKITFFAVLIGIALGFLVAIVRSTYDRTGKL KILNLLCKLYLTVIRGTPVVVQLLIIYFVIFGSMDIDKVIVAVLAFGINSGAYVAEIFRS GIMSIDNGQFEAGRSLGFNYTQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGYIAMQ DLTKGGDIIRSQTFDAFMPLIGVALIYLAMVLIFTKLVNMLERRLRSSDH >gi|224461043|gb|GG657761.1| GENE 331 345285 - 346028 593 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 246 1 242 245 233 48 1e-59 MTTNGETLIKVEELHKIFGELHALNGVSEEIKKGEVVVIVGPSGSGKSTFLRSLNLLEEP SRGHVYFEGTDITGKNVDINKHRQKMGMVFQHFNLFPHKTILQNITLAPVKLLKKSKEEA EKSAMDLLRLVGLEEKANSYPSQLSGGQKQRIAIIRSLAMNPEVMLFDEPTSALDPEMVG EVLELMKKLARDGMTMVVVTHEMGFAKEVATRVIFMDEGEIKEQGGPDEFFGNPKEPRLQ EFLSKIL >gi|224461043|gb|GG657761.1| GENE 332 346147 - 347283 1065 378 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571605|ref|ZP_03780601.1| ## NR: gi|225571605|ref|ZP_03780601.1| hypothetical protein CLOHYLEM_07703 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07703 [Clostridium hylemonae DSM 15053] # 1 378 1 378 378 723 100.0 0 MKRKFLSVLLTASFVLALTACGKGSDDSGGQKSASKAFDDYERPAVADEEEVSIIYLISN MTDESNIRCEQQAAVEAAHRGWDYQVINYEKEDNFREYFQNAISQQPTAIIIGVTQSFDS YQDLVEQARGAGIGIYSNDNSVIDGVISNSTMDNAEAAKAIMDQVVADHGAELKYAVYEL AMSEVMTLRADEAKNYAKDTNLELLDSIDLASTGDLNTAGYTIAQTWLQQYGNELQFIFC SADTPALSAAEAIVQAGDKTGEKTFVSGVDGGSSTWSYIRGNTPIKYTYSQPFEYFTHMT FEVINDIQVKGLNPGDDGCTISKAGEYMTAPGIVTTAENCPAAGDSIHSVFDFYGEDPDN EDAWYNWTDGPGIYEVTQ >gi|224461043|gb|GG657761.1| GENE 333 347622 - 348575 951 317 aa, chain + ## HITS:1 COG:SMb20500 KEGG:ns NR:ns ## COG: SMb20500 COG0667 # Protein_GI_number: 16264230 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Sinorhizobium meliloti # 4 311 8 322 331 176 33.0 4e-44 MRYKKLGKSGVDVSTMTIGTWAMGGLGYGSVERGDCIEAVRAMIGQGVNHIDTAWVYGLG ESDKVVGEAIKGMRDKVLITTKCGFRNPADGSGPNYPDCSPEWMSWCFEESLRNLGTDYV DFFLIHVPDTNVPFEVTAECVNKWQREGKVRYLGVSNFGIPEMEKMGQYIDITAVQSGYS MVVRGEEDNMIWAKEHNIGVMTHSSLASGLLAGAIRKLPELPDDDIRKLYQYPHFQEPRF SQVMELLKTLDKIAEERNVPVAQVALNWNTQKDFVTTSLCGVRNVKEALENCRSTEWELT AGEMEMIDKAIDETVGR >gi|224461043|gb|GG657761.1| GENE 334 348603 - 350135 1287 510 aa, chain + ## HITS:1 COG:TM0956 KEGG:ns NR:ns ## COG: TM0956 COG1129 # Protein_GI_number: 15643716 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Thermotoga maritima # 2 503 8 510 523 275 33.0 1e-73 MENQAILRFQGATKRFGDFVAVDHVDFEVHNKEIVAIIGENGAGKSTFCKMLTGVYPIDE GEMYFEGRNVNFRNTTESMKAGISMVYQERNLVGMLTGAQNICLGNEPGKGFISEKTAYE KALEIRDKLHLSIPLDVPVEELGAGEQQLIEIMRAFYNDPKVLILDEPTASLGEGEVEPF LAFIKEVREKMDIAVIFISHKIEELFAVADRIAVLTDGKNTLTDSVDNLTQIQVIMAMLR TGKSYGRVNVMEKDFTKLPVILDSVHAVYDGREHQLDFRVHKGEVVGFYGLVGSGRTECA EMLFGLRKAEKSYQFNGETITKCNTRTMIDRGMIMTPEKRADGMFKALSLVDNICNLFLK KELAGKGPGLVKQGKSREFAGTVLSENDVKYNTPGQSISSLSGGNIQKIIIGRSIAIENI SLLILDEPTNGIDVGAKFEIYQKVRQLTDSEEETKRIGVLFISSEIDELLNVCDKIYVFA DGDIIQGFERNEFDKQNILSVAVRGKKIDG >gi|224461043|gb|GG657761.1| GENE 335 350128 - 351126 1311 332 aa, chain + ## HITS:1 COG:YPO1553 KEGG:ns NR:ns ## COG: YPO1553 COG1172 # Protein_GI_number: 16121826 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 22 321 26 330 331 114 29.0 2e-25 MGKNTYIRKKKGIKEQLSRVFLLIALVVIALIFQAVQPRFLMLNNVMNLLALSSIIGVLA LGNMILMAAGEMSFSIGAQCTVIGAVFGKFLAAPDSNNMFLAFLISVAASAAIGLFLAFC TIRIGVPTFVCTLALATVVDGCSQLLNDGTTLYSKDWPDSFNIMQMRIGGILPAAVAVFL GLAVLTHLVYEKTRFGRHLYAVGSNPTAANNSGISVPGMKVWAFVISSVFCGLAGMIAAS YNNSVSLTMGSELLMPAIAATMLSATFLKLGKYNVPGTVLAAILMIVIQNGVISAGYPIY VKDIVQGLLLTVAVAIIALIKEDGLPSVKLES >gi|224461043|gb|GG657761.1| GENE 336 351145 - 352131 1060 328 aa, chain + ## HITS:1 COG:YPO1553 KEGG:ns NR:ns ## COG: YPO1553 COG1172 # Protein_GI_number: 16121826 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 19 320 23 328 331 125 28.0 9e-29 MADKNRSKPEFFGGMLARRWLLFFTAATAIVFGIISPAFLQVTNLLNILSNACIVGVMGV GLTCIFATGELDFSAGAQVSLASCLMAVILGRTSFHNYIGAVLLTLLVLGLVGIYNAFLH VKIGIPAFIATLGTSYLVKGAAKALTNSKNVNNLSAWPKEFTFMGQGYLFGIIPMPVVIL VIAGALILFYTEYTRAGKYLYAVGANPTACDYIGIDGRMQKVKGFVITAVLCGLAGIMQG SQMNAASPTLGENMFVPALTTVFLGAAYGKIGVFNVPGTLVGAVLYALINQGLLMITSEL WLKNYVQGGMLLFALIMVVVIRSKGHKK >gi|224461043|gb|GG657761.1| GENE 337 352154 - 353206 1182 350 aa, chain + ## HITS:1 COG:MTH970 KEGG:ns NR:ns ## COG: MTH970 COG0111 # Protein_GI_number: 15678988 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanothermobacter thermautotrophicus # 70 341 33 304 525 182 38.0 1e-45 MTKIVFVSEGLITKQDLEVRGIPQMFDEFKEYGVEYAFTEDLGALNKAGGNMREANLRLE KEGPDWVEHTPQFLESIRDADIIIMHYSGADRRFFEAAQRLKLLCVMRSGVENVDMKAAK EHGVTVCASPGRAAEPVADFAVTLMLALMRRLPRNDMGGKGEWKDSVMGLEGMMKNSTVS LLGFGAIARKVAKRLQGFGCSIITYDPWADPETAKKMDVEIVGTIEELFQRADFLSVHAR LTPENHGMINERLLTLMKPTAYLVNTARAGLIDEEALIKALEEHVIAGAGIDVFSDEPLP DGHPFLKLDNIIATPHVAGNGGDFILRSIESPLNEIRHYFKEEPYSYKMN >gi|224461043|gb|GG657761.1| GENE 338 353237 - 354727 1302 496 aa, chain + ## HITS:1 COG:HI1027 KEGG:ns NR:ns ## COG: HI1027 COG1070 # Protein_GI_number: 16272961 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Haemophilus influenzae # 5 440 3 437 485 203 28.0 6e-52 MEKKYFLTIDRGQSEIKAAFYTVNAEVVCLESRRCQPIRSLKPGWAEQDMELMWEQAAAA VRELFCKSGISPEEVAAVSFSGQGGGNFLVSQDGEAVYPGVLSMDSRHEEVMDHFETQKE AEIPRTAAFMLWLKEKEPEVFKKVRWILGSKDWIRYRLTGKANADMSDPPAPVDLDTGEY LTKCLETAGIAECITMLPPLVYASEICGAVTEEAAELTGLAAGTPVAAGAHDMIACSIGS GGNKQGHLAVIMGTLGINIAVLDAAARLPAVQVPGESFLFGGITREIKTVTTSIGSGCNT MNWLLDLMFSGEEQEAKEKGVSVFELLEKRLAEKKESSIVFQPYLLGTFYNSSARAGILG MTSHTTKEDILLALFQGICITMCIEIRRLEVRTQKFREIWMTGGGSQSNIWGQMFADVLK RPVHIGKDRETGCRGAAICAGVALGYYTLQDGFPEPVREKTYYPREEKAAWYEEQLKLYQ EAYDMSVDFWNRQKEL >gi|224461043|gb|GG657761.1| GENE 339 354757 - 355656 977 299 aa, chain + ## HITS:1 COG:lin2239 KEGG:ns NR:ns ## COG: lin2239 COG0191 # Protein_GI_number: 16801304 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 242 1 244 284 179 40.0 4e-45 MLVTMKEILDRANEGNYAVPAPVVQTELNARTAIKCAEEMNSPVILLVPLIFDYDVDLFG RYLKALAEASKVPVAVNHDHGSDFESAVACIRAGFSSIMVDRSELPFEENAAQVKELVKV AHAAGVSVEAELGHVGNASNYEADRDAALTEPELAKRFIEETGIDCLAVAIGTAHGAYDK GQIPYLDYDRLEEIKKVTGNFPLVLHGGSGTGDEGLKKAARMGINKVNIGCELFASAIEA IENADTSGSGAYGFANIIEEGYGSRLKHFITILGSEGMAWKADNTVRRKKVEITENTIL >gi|224461043|gb|GG657761.1| GENE 340 355676 - 356740 772 354 aa, chain + ## HITS:1 COG:ydjL KEGG:ns NR:ns ## COG: ydjL COG1063 # Protein_GI_number: 16129730 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 353 1 355 358 305 41.0 8e-83 MKGLVLYERGKTEIREVQKPECGDRDILIKVESAAICGGDVHFYNGALPCLGEYPIILGH EFAGTIAKMGPHADTYWKVGDRVISENTASVCGRCPACEKGNFVNCPERETLGCSVDGAF TQYVKIPGDLLAVYPNCLFRLPEEIPMETAPLLEPAANAYMAVVQEGQMMPGENVVVFGA GALGLFSVQMAKIAGAAKIILIGMPSDEESRFPCGRKLGATHTIINGEGVDLAAEVEKIC GMSGVALCIDAAGAPAVLKQAVEIVRNDGIVVRIGMNDKPYGYGMNEVNVKSVSITGHMG YNTTSWRNVISLAAAGKLDLASLVSHRLPLSQIKHGFELLKDQTAIKIVIDPDN >gi|224461043|gb|GG657761.1| GENE 341 356858 - 357799 993 313 aa, chain + ## HITS:1 COG:BH0780 KEGG:ns NR:ns ## COG: BH0780 COG2390 # Protein_GI_number: 15613343 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Bacillus halodurans # 10 310 11 312 316 144 31.0 3e-34 MSPNRLDMKVQVANMYYRQNLSQQEIAKELNISRTTVSRILKNCIDEGIVSIHIKNTSMY QYELEKKLEKKYGLKHVCVVNDKNDNELILKAIGESTADYLKNAVSENVRIGVSAGTTIA SIIYRLQAIDRYNIDVFQMQGDASHQMSNCSSFLAIDLAKILGGIPHAMHVPLLVHTKVL RDLLLEEPFNKKHFQELANLDIAIVGLGLLDAILPNTSDTWYNFTADKEELRSKNVVGDI CGTFIDYDGNLCDADIQDRTIAIPLEQLRKIPHCIAVAFGRNKKYIAKAAIKGGYINVLM IDEGLACALLEED >gi|224461043|gb|GG657761.1| GENE 342 357897 - 359453 1510 518 aa, chain - ## HITS:1 COG:BS_yfmM KEGG:ns NR:ns ## COG: BS_yfmM COG0488 # Protein_GI_number: 16077809 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 518 1 518 518 803 72.0 0 MSILTVEHLSHGFGDRAIFHDVSFRMLKGEHIGLVGANGEGKSTFFNIVTGAVTPDSGKI EWARDVRIGYLDQHTALNKGMTIRDVLKSAFSYLFALEERMNDICDKLGSADEETMNSLM EELGVIQDTLTMHDFYVIDAKVDEVARALGLLEIGLDRDVTDLSGGQRTRILLGKLLLQK PDILLLDEPTNYLDEEHINWLKRYLNEYENAFVLISHDIPFLDEVVNIIYHVENQELNRY VGNYEEFQKVYAVKKAQLEAAYKRQQQEISQLKDFVARNKARVSTRNMAMSRQKKLDKMD VIELASERPKPEFHFRPGRTPGKYIFELKDFVIGYDEPLSAPLTLSIERGQKIALTGANG IGKTTLIKSILGLVPPLSGTCETGENIAPGYFEQEGGHNNKRTCIEEIWQEFPSFTQYEV RSALAKCGLTTKHIESQVRVLSGGEQAKVRLCKLIGRETNVLLLDEPTNHLDTDAKDALK AALKEYRGTLLLICHEPEFYQDIVNDVWDCSKWTTRIV >gi|224461043|gb|GG657761.1| GENE 343 359674 - 361755 1465 693 aa, chain + ## HITS:1 COG:AF1203 KEGG:ns NR:ns ## COG: AF1203 COG0243 # Protein_GI_number: 11498802 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Archaeoglobus fulgidus # 1 687 36 738 741 285 31.0 2e-76 MSETKIVKTACGICGPCCQADAYVKDKLLVSVEGSRNVKGQSGGLCAKGMAAKQYVYNKE RLLYPMKRAGKKGEGKFTRITWDEAYDIIAENLLKVRDTYGARSTVFYTGYPKWYRPALL RLANAYGSPNYCTESSTCFQAAALAWRSIYGNHICGPDLAHARSVLLWSSNLYHSNTAMS GIYQGLKKRGVKIIDVDSRRTVTANDADIHLQPVPGTDGALALSMAHVIIEEGLCDKAFI DNYVYGFEEYREYAGRYTPEKAAVITGVDAGLIRKAARMYAENGPSGILFSASPIVHHTN GVQNYRAVFSLPAITGNYDVEGGNCSMAGITSPCNEFGKVRRYEKEEAIGQRDFPVWFDL SCDEAQCTRLADYIMKEEPYPVKALFGMGLNHRMWPQPEYVEQALMKLDFYVNVELFMSD SCKAADLVLPACTSYEREEVHCLKGGRFFFSNKAVEPLGESENDIEVIMEVLKRMGLRDE VLEKGYDNYMQYILEPSGLTLKELKDSPEGLQGRHLRMPSFKNYEKEAFRTPSGKIELKS LVLERYKDSHGYEGLPVYRDYRKETAVDRKRYPFILNTGCRRPQYFHSRVYRVPWLDALQ PSPLIEMHPLDAEKCGLKEGDTVIIRSPAGAVTGMAACNINGDPGVVYMYHGDGRGDANE LIDKDYLDPISGFPGYKSYFCNVEKMEEQPHEL >gi|224461043|gb|GG657761.1| GENE 344 361745 - 362206 249 153 aa, chain + ## HITS:1 COG:HI1046 KEGG:ns NR:ns ## COG: HI1046 COG0437 # Protein_GI_number: 16272978 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Haemophilus influenzae # 3 138 4 150 205 86 36.0 2e-17 MSYKFRFDEKKCTGCFACHTACLDAHYGPGEEGISLRSIKRIVAESKSFQKDVCPGCIHC GACARACPCGALLADEDTGIVLARRALCSGCRACESACPVQVIRFDREGKIVKCDGCLTR LKAGREPACVRACPTGAVTVEEERESDERETDG >gi|224461043|gb|GG657761.1| GENE 345 362184 - 362768 549 194 aa, chain + ## HITS:1 COG:aq_1419 KEGG:ns NR:ns ## COG: aq_1419 COG0746 # Protein_GI_number: 15606598 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Aquifex aeolicus # 13 191 18 194 201 63 29.0 2e-10 MKEKQMDNTLAGYILAGGKNTRMGGRKKLFLKYRGKQFYLWLKNGLKAAGALYVSVEEYA PYEGLDAVLVKDIYKGTGPIGGICTGLKLCQEDALLVVPCDMVPVPDRLLKDLMEIYRRT GRPVCPSAGDRLLPLPAVYSKEMLPAAEELIAEGNCRLCGWWERSLAGCEILPLEHTTVN NVNTKEDYKRLEGQ >gi|224461043|gb|GG657761.1| GENE 346 362770 - 363969 924 399 aa, chain + ## HITS:1 COG:BH3021 KEGG:ns NR:ns ## COG: BH3021 COG0303 # Protein_GI_number: 15615583 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Bacillus halodurans # 26 399 31 411 423 249 38.0 7e-66 MVTLEEAQRILNAHVKQTEGTKECSLSEALGRRIGEDLAARTDQPPFPRSPLDGYAVRAG DIRGACAQNPAVLNVAGELPAGVPAVQSLGPGQAVRIMTGAPIPEGTDAVIRQEDTDYGE EKVQIYRSVKPCENICFQGEDYRAGTHIIRNGERMDAVNIALAAGMGYERVRVRKKPAVA VLTTGSELQEPGRPLRPGAVYDSNRYLVEARLREWGITPFYAGRIEDDAGKAAGCLARIS KEADLIITTGGVSVGKMDIMHDVIERLGAERLFWRVKLKPGSPAMASVYEGAVIISLSGN PFGAAAGMELLVRPALYHMTGDSALAPVRQQAVMENGFPKKSGSRRFVRAVWASGMVRVP EGSHSSGSLSSMKGCNCLIDIPAGNEGLCKGDSVWIILL >gi|224461043|gb|GG657761.1| GENE 347 363951 - 364427 392 158 aa, chain + ## HITS:1 COG:mlr0548 KEGG:ns NR:ns ## COG: mlr0548 COG1763 # Protein_GI_number: 13470757 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Mesorhizobium loti # 11 114 3 109 167 92 44.0 2e-19 MDNTAVGRPYIYAVSGFKNTGKTTLITKLIPELKSRGYKVAVIKHDGHDFEPDVPGTDSF RHRMAGAFGTAVYSSGRMMVTKECSGVTEHEIVQAFPEADIILLEGLKDSTYPKYICDHP RNIPDVKAVADTIESNMKITRKEDTGDGHDEKGVNGRN >gi|224461043|gb|GG657761.1| GENE 348 364396 - 365163 600 255 aa, chain + ## HITS:1 COG:no KEGG:Pjdr2_5268 NR:ns ## KEGG: Pjdr2_5268 # Name: not_defined # Def: hypothetical protein # Organism: Paenibacillus # Pathway: not_defined # 1 249 7 272 276 191 41.0 2e-47 MTKKELMEGIKLPADAQRIVETYDMQRAEYISWKELFYRDTERFLGKSREEEGTDQLLLY LYVSFAAERYEQFKKRGITDKVYFDTFYDFTIWYRCCLKRRGVRGLMEEGWLSLPLQMRI FRLGRLQFETGDGVLHVHIPEGEPLAEKACDDSFSQADKFFDASYTMYDCDSWLLSPNLS CVLDEESNIMKFQKRFRIRKVTYPYRQAEERIFGEVLADKEKYPEETSLQKRAKKYVLAG KDLGIGYGVIYRQHQ >gi|224461043|gb|GG657761.1| GENE 349 365249 - 366559 1311 436 aa, chain + ## HITS:1 COG:lin0762 KEGG:ns NR:ns ## COG: lin0762 COG1653 # Protein_GI_number: 16799836 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 3 381 1 362 417 92 25.0 1e-18 MKIRKRSAAAIAVVLCLSLLAGCSGGDKKSGSSSKEDGRTTLTFWCHDNEPWVKAYKEMA KKFEEANSEYKVEVQEYPYEVYNDKIQTALTSSTSGPDVIAVWGGMAPNFIKSDALSEVP ADLSKEMDEDYMEPTVGIYQKDGKYYGVPMEFNLEYGGMIVNKKLFNEAGIAYPETWEEL RRTSKEVSEQNGDIVEVKGFEMIDTDALICNYLAMILQQGGQYLQDDDSVNFATPEGIAA MNEILSMVKDGECDLENLTADEYCYNDVYQDKGYMSSVGSWAIGEGTDSYDLTYGEDFEY VQVPQYGEKMAFASETGWGIIVPENGKNKDAAWEFVKFFSQPENLVQHNIACNQLPPRKS LLDSEEYKEAMPNVTFLLDILPSGQWMGPYNTSDMRDVFNQTFIDLCQSDDPDVEGALKE ASEKITKECQIGYSMD >gi|224461043|gb|GG657761.1| GENE 350 366635 - 367513 1020 292 aa, chain + ## HITS:1 COG:lin0218 KEGG:ns NR:ns ## COG: lin0218 COG1175 # Protein_GI_number: 16799295 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 11 290 17 290 292 151 35.0 2e-36 MKNNRFVAAVLVPSFLFLFIFTAFPVVYGLGISFFDYNPASAQNIFLGLENYRRLVQDEV FWQAVKNTVFFGAAAVSANIIITLFLAKIISVLPWKRWKTFFRTILFIPCIAPVVGTSMV WKYGILGTDGGILNRIAGFFGMAPKNWFLTTLPLMLLIIVYTLWADIGYNVVLFTAGIEG VPKEFDEAAAIDGAGPVRRFLSIKLPLMGRTFAFVAIMTMANYFQMFAQFRIFASKGGMN NTAMVLTNYVYRTSFISFDMGYASAIAAGLFVIVFVVAMIQNKMMRADWSYE >gi|224461043|gb|GG657761.1| GENE 351 367513 - 368328 1045 271 aa, chain + ## HITS:1 COG:lin1843 KEGG:ns NR:ns ## COG: lin1843 COG0395 # Protein_GI_number: 16800910 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 9 271 15 276 276 171 37.0 1e-42 MKKKYHYMIVTFLGLFSAAMMYPMAWMLMISFKSNADIRTNKTKFFPEEWTLEGYKTAFE KAPIGHWFANSIFITIFITAAVIITSTLIGFIFAKYQFRFKKLLFVLLLATMMVPPQVTM IPRYLMVQKMHLFNTKWALIVPALVSAFSIYLARQFIADVPDSLCEAAKMDGAGPLRIYW SVILPNIKPAVGSIGIFTAMANWNDYLNPLLMLNDIDKMTLPLGLVIFDSQRTVDLSATM AAAAMIMMPMIVIFILFQKQFIKGMTLSGMK >gi|224461043|gb|GG657761.1| GENE 352 368311 - 369984 1299 557 aa, chain - ## HITS:1 COG:no KEGG:Closa_4081 NR:ns ## KEGG: Closa_4081 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 548 1 548 552 593 52.0 1e-168 MNPQTPSYEIKLLSSLAKVFPDETPVYQPECLLLSTLKGETVSFQAACTASGTFFKTAAE VVIHSPLKHCIRVRNVLNVPVGRACNPETDDNYLRTTSGMYPDLLRELSDNTTFIFPGMW RSLWLDIKVPEETAPGVYPVEIALVKEGEVLCSAAASVTVYDVALPKQKIMHTEWLHADC LADYYHVPVFSEEHWAILKNFFLEYTDRGCNMMLTPLFTPALDTAFGGDRTTVQLIGITV DDGTYRFDFSRLKRWVDLCLECGIEYFEMCHLFSQWGAKYPPKIMADVNGKEEKIFGWHT PAVGEYTRFLHAFLPELTARLKEWGIDTVTYFHLSDEPRPDDLDTYRQAKESVADLLKGY HTFDALSSYEFYRHGLVDKPIPGNNEIDEFLEHGLTDMWTYYCVGQYLEVSNRFMSMPSL RNRIYGLQLYKYDIIGILHWGYNFYNSQFSLEHINPYETTDAGGGFPAGDPFLVYPGEDG RPEESIRMMVHYEGLCDLRACRLLESLTSREYVMELIEESLAEPLTFKRYPKSDMYLIQL RSRINREIASRSSLHTT >gi|224461043|gb|GG657761.1| GENE 353 370242 - 372005 515 587 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 235 548 12 318 378 202 35 1e-50 MKYERIQKGTFQERPNRFIAHIEIDGKKETVHVKNTGRCAELLTPGAEVYVQKSDSLERK TGWDLISVKKGERMINMDSQIPNRIVKEWMEEGHFVKDISLIRPEYTYRNSRIDLYVEAE ERKILVEVKGVTLEEGGVVRFPDAPSERAVKHVEELTEAVKEGYEAYVFFVIQMKDVRYF TPNMDTHRAFGEALRRAARAGVRIVAYDCDVEADRIAIAGNVPVILGEPLLYELARPLIS WYRENRRDLPWREQPDAYHVWVSEIMLQQTRVEAVKPYYERFLKALPTVRHLAEAGEDTL LKLWEGLGYYNRVRNMQKAAQQIMVDHNGTFPDTYEQILSLKGIGSYTAGAVSAFAFGLP KPAVDGNVLRVVSRILASEEDIMKQSVRADIERKLEEVIPADAASDFDQGLIELGAIVCL PNGEPKCMECPARSLCRARKLGIEKELPVKKKQKARRVEERTVFIFRDGENAAVRKRPGR GLLAGMYEFPNVEGKLTEADALNYSREIGLSPLHIRSLGEAKHIFSHVEWHMTGYLIRVD ELENSCTEDFLFVHPDEVQEKYPVPAAFEQYTAYINIRLGQDKYRAE >gi|224461043|gb|GG657761.1| GENE 354 372071 - 372493 599 140 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1216 NR:ns ## KEGG: EUBREC_1216 # Name: not_defined # Def: hemerythrin # Organism: E.rectale # Pathway: not_defined # 5 139 9 143 144 140 57.0 2e-32 MYAEFSENLVTGNEMIDTQHKELIERMNGLLESCESGNEKLTAIKTLDYLSDYTDYHFKA EEQLQQDIEYPGYEKHKAQHEIFKQTINELQEMLQEEEGPSEAFVEKVEENIVKWFYVHI EGFDRSVAEYKFMRGNNERL >gi|224461043|gb|GG657761.1| GENE 355 372531 - 373199 696 222 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3720 NR:ns ## KEGG: Cphy_3720 # Name: not_defined # Def: phosphatase # Organism: C.phytofermentans # Pathway: not_defined # 10 213 4 209 223 209 55.0 5e-53 MKAWDKVKYFIKKYRHAWVFLYAFIYMPWFIYLENHVTSHFYVIHSPLDDYIPFVEYFIV PYVLWFFFIALAIGYFFFTDRKGFYQLTAFLFTGMTIFLIICTLFPNGLNLRPVVFERDN VFVHMVQRLYTTDTPTNVLPSIHVFNSIGVTIAVSHSSALKKHKTVQYATYIMAFLIILS TMFLKQHSVTDVIAAAAMACVIYPLVYVTQEKKAPKLSHQPV >gi|224461043|gb|GG657761.1| GENE 356 373301 - 374119 499 272 aa, chain - ## HITS:1 COG:BMEI0819 KEGG:ns NR:ns ## COG: BMEI0819 COG0584 # Protein_GI_number: 17987102 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Brucella melitensis # 38 248 18 219 246 126 37.0 5e-29 MYLILVIFIFIVILYLYLVWPRTSAREQMERFEHTLFAHRGYHCAARGIPENSMPAFRAA VKKGYGIELDVHLTRDGKLAVFHDDDLMRVCKSSESVENLTYKELGRYHLLDTKEHIPLF TDVLSLVNGQVPLLIEMKIPSSSTAICSALYDALKNYKGPFLVQSFNTMGIRWFRLHAPK VLRGQLSDNLTKKKSKEPWVLRFMVRHLLTNALGRPDFISYKLADLPAFSVSVLRALAHT PVAVWTLRTEAALEEGIRCYDMQIFEKQNENY >gi|224461043|gb|GG657761.1| GENE 357 374144 - 375061 774 305 aa, chain - ## HITS:1 COG:BH1953 KEGG:ns NR:ns ## COG: BH1953 COG1597 # Protein_GI_number: 15614516 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus halodurans # 1 285 1 278 295 165 35.0 8e-41 MYTFIVNPNARSGLGHRVWAEIERSLKERGTDYQVYFTKYQRHASAIAGELTSDLKAHTL IVLGGDGTVNEVMNGIADLSLVTFGYIPIGSSNDFARGLGLSTDALTALSHILTPSKYTY INVGTMSYQEKKRRFAVSTGIGFDAGVCHQVVVSRLKVLLNKIGLGKLSYAGVALSLMMS LKPRKMTVTLDDSRKMEFESVYFAAAMNQRYEGGGFKFCPAADPSDDILDVIVIANMPKL KALALLPTAFSGRHVRFRGIHIFTCRKVDFVSETALPVHTDGEPIFLQRHMSASLEPQKV RIILS >gi|224461043|gb|GG657761.1| GENE 358 375089 - 375697 565 202 aa, chain - ## HITS:1 COG:CAC2605 KEGG:ns NR:ns ## COG: CAC2605 COG1309 # Protein_GI_number: 15895863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 10 194 4 184 194 68 26.0 1e-11 MNEINETQELSKQQLKSKETKARIFCAAKSILKKQGYEALSIKNICEEAGVSNGSFYHHF KTKDDLLSYYIEEQPSINPDYLDLPASTAEAKTTIVHVYLNYVTYCRELGVEFMANYYTP KNQSLNPLIRTERPYPIVTVRNYLDKAVRAGVVTPRLSLDEITTDIRMIVIGNVFEWCLK NGSADFEGNMRRSLETYLDGAL >gi|224461043|gb|GG657761.1| GENE 359 375886 - 378042 183 718 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|82703189|ref|YP_412755.1| 30S ribosomal protein S1 [Nitrosospira multiformis ATCC 25196] # 639 718 195 272 571 75 45 4e-12 MDINQKITEELGVKRWQVDAAVKLIDEGNTIPFIARYRKEVTGTLDDEQLRRLFERLTYL RSLEEKKEQVLSSIEEQGKLTDELRRQILAAETLVVVEDLYRPYRPKRRTRATIAKEKGL EPLADLIMLQKLEGPLEEEAALYVDVEKGAGTVKEAVDGAKDIIAERISDEADYRIWIRK LTFQKGRIVSAAKDEKAESVYEMYYDFEEPVGRLAGHRVLALNRGEKEKFLTVKVEAPEE EIIRYLEKKTIVSDNPYTAPVIKETVEDSYRRLIAPAIEREIRNDLTERAEDGAIQVFGK NLEQLLMQPPIVGRTVLGWDPAFRTGCKLAVVDPTGKVIGTTVIYPTAPTTPQKIQAAKD LLKKIIKKYNISLISLGNGTASRESEQVIVELLKEIPEKVQYVIVNEAGASVYSASKLAS EEFPKFDVGQRSATSIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSETLSGVVEGC VNKVGVDLNTASAPLLSYISGITGTIARNIVTYREENGKFTSRTQLLKVAKLGPKAYEQC AGFMRIQNGDNPLDGTSVHPESYEAAEKLLKKQGFSTEDIRGGKLTGLSFTIKDYGKLAG ELGVGEITLRDIVKELEKPGRDPRDEMPRPILRTDVLEMKDLTEGMVLKGTVRNVIDFGV FVDIGVHQDGLVHISEITDKKFIKHPLEAVSVGDIVDVKVMSVDLKKKRIQLTMKGIS >gi|224461043|gb|GG657761.1| GENE 360 378078 - 378944 1202 288 aa, chain + ## HITS:1 COG:CAC0848 KEGG:ns NR:ns ## COG: CAC0848 COG1284 # Protein_GI_number: 15894135 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 9 281 21 290 292 147 32.0 3e-35 MKKNMKIVLGVLAGNAILALAVAAFVVPHGIIMGGATGIGLAVTHYVPLNLSVVIFIVNA ILFVLGACMLGRKFALTTIISTFVYPVFLEIARKIPGVDSLTDNILLATVYGGLLLGLGI GLVVRQGASTGGTDILALVLNKFLHGPVAVFMYIVDFTVLGAQIFFSDSEQVLYGVLALM LMTMVMNRVVLFGQTQIQLFIISEKHEEIRQRILKDMNVGATMVHIETGYGKEQQKGVLC VIPHRKLYAVNDTVSRIDDKAFTTITQIKEVKGRGFTMERVSYHGEDR >gi|224461043|gb|GG657761.1| GENE 361 378964 - 379155 281 63 aa, chain - ## HITS:1 COG:CAC0009 KEGG:ns NR:ns ## COG: CAC0009 COG1827 # Protein_GI_number: 15893307 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Clostridium acetobutylicum # 1 63 1 64 171 60 53.0 9e-10 MTGKERRENILDMLSDRTPVTGSRLASHFGVSRQVIVQDIALLRAANHTIIATTNGYLRL EQN >gi|224461043|gb|GG657761.1| GENE 362 379168 - 380028 569 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 1 279 1 283 286 223 43 6e-57 MINGVTMKINIDEYILNALKEDITSEDVTTNAVMPAACPGRAELICKEDGLICGLPVFRR VFELLDETALFETECKDGDPVKKGQIIGIVTGDIRAILSGERTALNYLQRMSGIATFTNQ LARELEGSGTKLLDTRKTTPNNRAFEKYAVKVGGGCNHRYNLSDGILIKDNHIGAAGGVA KAVRMAKEYAPFVRKIEVEVENLDMLKEALDAGADIIMLDNMDNETMKQAVAAAAGRAET ECSGNVTLDRLKEIREIGVDYVSSGALTHSAPIMDISLKNLTPVRE >gi|224461043|gb|GG657761.1| GENE 363 380000 - 381319 1119 439 aa, chain - ## HITS:1 COG:FN0009 KEGG:ns NR:ns ## COG: FN0009 COG0029 # Protein_GI_number: 19703361 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Fusobacterium nucleatum # 7 381 7 378 435 395 53.0 1e-109 MIEPYYDVVIVGTGAAGLFTGLSLPEHLRILMITKDDVENSDSYLAQGGICVLRSDEDYD SYFEDTLRAGHYENNREAVRIMIQESPDIIRRLISFGVEFEHRGDELAYTKEGAHSVCRI LYHKDVTGQEITGKLISCARERPNITIAPHTAMADLILQEGRCAGIIVRQEGKAITTVSS KAVFLATGGLGGLFANSTNFRHITGDSLALALRHNIELENIHYIQIHPTTLYSHREGRRF LISESVRGEGAILLNPAGQRFVDELKPRDVVTEAIRREMDKFHSPYVYLSLAHMPKEQII HRFPNIYERCLEEGYDLSKDRIPITPAQHYLMGGIRTDSFARTSCGHLFAVGEAGCNGVH GANRLASNSLLESLVFARRGAAYLASRIDSIPHPPAPVFTGLTAYADPEARRREDRELIL NEIKRRDEQFYDKWCNDEN >gi|224461043|gb|GG657761.1| GENE 364 381334 - 382239 975 301 aa, chain - ## HITS:1 COG:FN0008 KEGG:ns NR:ns ## COG: FN0008 COG0379 # Protein_GI_number: 19703360 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Fusobacterium nucleatum # 5 300 3 296 298 277 48.0 2e-74 MTTLERIRQLKKEKNAVILAHYYVNDDVQEAADHIGDSYYLSKAAASADADVIVFCGVSF MGESAKILNPDKTVLMPDAAADCPMAHMADIEKIQKCREEYDDLAVVCYINSTALLKTYS DVCVTSANAMDVVSALPNKHIYFIPDANLGRFIAAGLPDKHFIFNDGYCHVHKDITAAHI RNAKEAHPDALVLIHPECTPDAVALADYAGSTTGIIKYASESSCDEFIICTEGGVFKELR DRNPRKRFYPAHGHQCCTDMKRITLEKVAFALEHMEHAVELDEATRRKAARPLERMLELA Q >gi|224461043|gb|GG657761.1| GENE 365 382740 - 383375 933 211 aa, chain + ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 17 207 4 192 209 157 43.0 2e-38 MSTDVMNNVNARTKTRTKVRTIAQVGMLGAIATVLMLFEIPLPFAPAFYQIDFSEVPVLI GCFAMGPLAGAAVEFIKIMLNFAINGTITAGVGEAANFLIGCALVIPAGLIYRRKRTRTG AVAGMVSGTVIMTAAGCFLNAFILLPAYAKAFEMPIDALVGMGSAINKSITDLFTFVLFA VAPFNLLKGVLVSMIVLLIYKKISPILKMNM >gi|224461043|gb|GG657761.1| GENE 366 383507 - 384250 586 247 aa, chain - ## HITS:1 COG:CAC3166 KEGG:ns NR:ns ## COG: CAC3166 COG1342 # Protein_GI_number: 15896414 # Func_class: R General function prediction only # Function: Predicted DNA-binding proteins # Organism: Clostridium acetobutylicum # 1 107 1 120 143 78 37.0 1e-14 MARPGKSRRVGSIPRCLHFTASGSPRNGINLSVEEFETIRLMDYSGMTQAQCAVQMHVSR ATVQSLYTQARKKLARFLVEGTYLDISGGDYTVCADSRDGYSGSRHMKINDDKGADIMKI AVTYEDGQIFQHFGHTKQFKIYEAEDGRIISSEVKSTDGQGHGALAALLSDLNVDVLICG GIGGGARNALSEAGIDLYPGAVGEADAQAASFLAGTLSYDPDTMCSHHHGEEGHKCGSHG CKEHGNH >gi|224461043|gb|GG657761.1| GENE 367 384356 - 384727 528 123 aa, chain - ## HITS:1 COG:FN0356 KEGG:ns NR:ns ## COG: FN0356 COG0346 # Protein_GI_number: 19703698 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Fusobacterium nucleatum # 1 120 1 120 123 152 61.0 2e-37 MKFTFYHNNINVLNLEKSVDFYKNALGLTVTREKKAEDGSFRLVFMGDNTTPHLLELTWL RDMDRPYNLGDNESHLAFRVDDFDKALAHHKEMNCVCFENTEMGIYFIEDPDGYWIEICP CGE >gi|224461043|gb|GG657761.1| GENE 368 384833 - 385447 698 204 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225571642|ref|ZP_03780638.1| ## NR: gi|225571642|ref|ZP_03780638.1| hypothetical protein CLOHYLEM_07740 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07740 [Clostridium hylemonae DSM 15053] # 1 204 27 230 230 342 100.0 1e-92 MSVKVEVKLDAESMADFMIYHIYTSGAGVAALVLGMLNVGLTIAFVMRRQFLLAVVFFLF VLLVFVVFPAFIRKKVVKQMQNSRRLEETVTYEFMDDGIMTTTTEDSGKASWSKFKRAIS RKQIIFLYDAQKRAIILPVAQLGDKYTDIVDMIFAHMPAPAVRIRRADGKKMKAAGPSRK AEKMKAEVNENETREPEEGKGPEQ >gi|224461043|gb|GG657761.1| GENE 369 385460 - 385885 534 141 aa, chain + ## HITS:1 COG:CAC2838 KEGG:ns NR:ns ## COG: CAC2838 COG0802 # Protein_GI_number: 15896093 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Clostridium acetobutylicum # 11 138 11 137 152 118 45.0 3e-27 MISVSYSEKDTYELGRSMGEKACPGKVFTLIGDLGTGKTVFTKGLAAGLGIKEPVSSPTF TIVQVYEEGRLPFYHFDVYRIGCVEEMDEIGYEDYVYGDGVTLIEWADLIEEILPEHYTE IKIEKDPEKGFDYRRIDICEY >gi|224461043|gb|GG657761.1| GENE 370 385873 - 386577 186 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 42 226 1 182 380 76 31 2e-12 MRILALDSSGLVASVAVVGEEQTAAEYTVNYKKTHSQTLLPMLDEVAKMIELDMDTIDAI AVAGGPGSFTGLRIGSATAKGLGLALHKPLIHVPTLEGLAYNLYGTAGIICPIMDARRNQ VYTGLYRTEHTFEVVEDQMAAAVEELAARLNAAGEKVTFLGDGVPVYKEMLEEKLTVEHY YAPAHMNRQRAASVGALGMKYLLEGRSETAAEHRPDYLRVSQAERERKERLKES >gi|224461043|gb|GG657761.1| GENE 371 386574 - 387608 1137 344 aa, chain + ## HITS:1 COG:CAC3420 KEGG:ns NR:ns ## COG: CAC3420 COG2008 # Protein_GI_number: 15896661 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Clostridium acetobutylicum # 1 342 1 342 344 442 61.0 1e-124 MIIFECDYTEGAHPEILKKMEETNYVQTPGYGVDCYCESAREKIRKACGCETADVHFLVG GTQANFTVISSILRPFQGVIAAESGHINVHETGAVEGTGHKVLTLPSEDGKITAAQVRRM YEEHWDDVTHEHMVQPGMVYISHPTENGTLYSKEELKELYETCRERDLPLFLDGARLGYG IASEASTLTLRDIASLTDVFYIGGTKVGALFGEAVVIVDPALKKDFRYMIKHNGGMLAKG RLLGIQFDTLFTDDLYYRVAEHADSLAMRLKKAFQEKGYGLRYDSYTNQQFPVLPNDHME KLAKDYSFSFWEAVDKEHTAVRFCTSWATKEEAVLQLIEDIQNL >gi|224461043|gb|GG657761.1| GENE 372 387626 - 388069 217 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238926143|ref|ZP_04657903.1| SSU ribosomal protein S18P alanine acetyltransferase [Selenomonas flueggei ATCC 43531] # 1 141 1 141 163 88 34 4e-16 MVTVRQIGEQDIEKIAGLEREIFPDSWSYEALCDTYGQNNSVLFGAFDGDRLIGYLIVYY VLDEGEIARIAVREGSRREGAAGHMLLALESFCEEKGITKLLLEVRESNEAAIAFYKDHG FEEDGVRKGYYADPAEDAVLMSRGLGR >gi|224461043|gb|GG657761.1| GENE 373 388175 - 388402 323 75 aa, chain + ## HITS:1 COG:no KEGG:Closa_0626 NR:ns ## KEGG: Closa_0626 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 75 46 116 125 65 42.0 6e-10 MRQYDVQIKETKDLQKIICNKCGKEIIISKGVPQEDYLEVEKRWGYQSNKDNQVDCFDLC EDCYDDFVKGFKIKI >gi|224461043|gb|GG657761.1| GENE 374 388417 - 389322 1065 301 aa, chain + ## HITS:1 COG:CAC1584 KEGG:ns NR:ns ## COG: CAC1584 COG1234 # Protein_GI_number: 15894862 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Clostridium acetobutylicum # 1 300 5 310 313 340 50.0 3e-93 MLDVCLLGTGGMMPLPYRWLTALMVRYNGSSVLIDCGEGTQIAIKEKGWSFKPIDVICFT HYHGDHISGLPGLLLTMGNADRTEPLTLIGPKGLERVVNALRVIAPELPFPVKYIEITEP EQTFEMNGYRLKAFRVNHNVLCYGYTLEVDRAGKFDVDRAGAAGIPQRYWGILQNGENVE DNGTVYTPDMVLGPPRKGIKLTYCTDTRPTESIVENAAGSDLFICEGMYGEKDKLKKAKE YKHMTFYEAARLAKEAEVKEMWLTHYSPSLTRPEEYMDDVRAIFPNAVAAKDKRTAELTF S >gi|224461043|gb|GG657761.1| GENE 375 389310 - 390365 844 351 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 1 350 503 858 860 329 50 8e-89 DIFIGRGDIMSEEKDILILAIESSCDETAAAVVKNGRDVLSNVISSQIDLHTLYGGVVPE IASRKHIEKINQVIEEALREAGTALEQIDAVAVTYGPGLVGALLVGVAEAKAIAYAAKKP LVGVHHIEGHIAANFIEHKELKPPFFSLVVSGGHTHLVRVKDYGKFDIIGRTRDDAAGEA FDKVARAIGLGYPGGPKIDRVAKEGDPDAVAFPRAHMEDAPYDFSFSGLKSAVLNYINGC RMKGETYSQADVAASFQKAVTDVLVENAMRAAKEYHMDKFAIAGGVASNTALRAAMEKAC EAEGIELYYPSPVYCTDNAAMIGAAAYYEYRNGTRHGWDLNAVPNLKLGER >gi|224461043|gb|GG657761.1| GENE 376 390396 - 391121 342 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 9 240 6 226 234 136 38 1e-30 MKEKKRCTAVVLAAGQGTRMGTSVQKQYLKLEGRPLVYYALKTFEESSVIDDVALVVGDG QVTYVREQIVRAYGFTKVSAVVEGGRERYDSVYEGLKAAVCADDGKVKDGYVFIHDGARP FADEEMLRRQYEAVVRYRACVAGMPSKDTVKLVDDDNYAVKTPERKYVWTVQTPQVFENS LIMDAYSMMMGEDCEGITDDAMAVERYMHVPVKLVEGSYRNIKITTPEDMEVAHAFLNGK I >gi|224461043|gb|GG657761.1| GENE 377 391492 - 394926 2720 1144 aa, chain + ## HITS:1 COG:BH2014 KEGG:ns NR:ns ## COG: BH2014 COG4932 # Protein_GI_number: 15614577 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 31 1080 228 1266 1816 114 22.0 1e-24 MWKKGRIICICLLAVLVSLAGSTTLHADGPAESVQTGFFTGVKAVDKDGNDIAALKNVER GTEVYLVYHYEIPAGGYETGKEYTFSIPKEIHMEDGTVFPVNMGDKQVAQGTVGYDTAQN TNIVRLVFSDTDAVQEGVEGDIWMGGTLSEDEIPNEGKQEIDFDLGLADGSDKITVDFAI DKQTADVSLTKQAGTPNLGELTIPWKITLKVESTTPADLPVTGLVIKDTLPEGLDFDETD PDSYSCVSAAGTPVTGGTIEKSTGGLITYTFPDGFSAAMGNAYTLTLKTSFELGIFGGGK DAVKFTNKAEAAYEFIEEPYKKDDDGNSVENKETKKVVTAAVTAGTTINGGILDKKGVLA GAGVREINWSVTVNSNDLGIENARITDTIPAGLTIKGGAGGITIRDKDGTDVTASFPGAV TVTGQNIAVVPGTINEKYTIHYTTMIADEYYDENKTETFKNHVEFTGGPGPDPAISISKD ASVKVNNALIAKTGSYSRKDHTITWTITLNQYESALADPIQVEDIIPDGLTLVTKGSDFA PADDIHVTKGTGSGITFRYDKDSRRLTGEITKSISEAVEFQFRTTVDDANIWAVNGYRSK PFHNEAVIKIGGHEYPVSSDPEIISEMFTKAAGSYNSAAGEIEWQLTCNQNEMPFHNAYI EDVIPDGLEYVAGSLSLMAPAGQQVSESYDRASKTLRVGLPAYVDKQYTVTFRTKITDSG FLTANATKKFSNLAVLYGDELPAPISSKAEKEVTGSVLSKKGEVKRDPAGVNYLEWSVTV NSNKTQLNKPVIADPLSTDPKLELDPSSVKLYEADVQPDGSVSRGNEVAVTRENITYDLT DNVFRFHFLKPIDRAYLLVFRTDFGDDARNKEVVNQVYYEGSEADQEHSGTHLKIAGSIA GGSSSIPKGNIAVKKYADDKVTVLKDAVFAVYNDYVTYTMRPTDINGESDLQQIRTGSYS IKEVTAPEGYVLDNTEHSADIGKNSTFTYEAYNTQIKGTLELTVRDDSKYAKPAGGVKVE IYDKDGTLIAEKITDTTGKITTDDLKYGEYYYKIVEAPAGYKIPGGTFPFRIEENGQVIK AEVLIHLSESDQAVPHTGGAGSGKGSEASHAKTGDNTGAAAYILLLAGSALCIVLARRSR RLIR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:38:26 2011 Seq name: gi|224461042|gb|GG657762.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_3, whole genome shotgun sequence Length of sequence - 25114 bp Number of predicted genes - 25, with homology - 25 Number of transcription units - 9, operones - 7 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 188 129 ## gi|225571654|ref|ZP_03780650.1| hypothetical protein CLOHYLEM_07754 - Prom 317 - 376 80.3 - Term 266 - 336 19.5 2 2 Op 1 . - CDS 378 - 2525 1222 ## COG3291 FOG: PKD repeat - Term 2571 - 2609 2.1 3 2 Op 2 . - CDS 2782 - 3504 542 ## COG3279 Response regulator of the LytR/AlgR family - Prom 3564 - 3623 7.3 - Term 3785 - 3846 24.5 4 3 Op 1 2/0.000 - CDS 3879 - 5360 1760 ## COG0554 Glycerol kinase - Term 5382 - 5429 13.9 5 3 Op 2 2/0.000 - CDS 5440 - 6093 777 ## COG3958 Transketolase, C-terminal subunit - Prom 6151 - 6210 80.3 6 4 Op 1 . - CDS 6212 - 6988 927 ## COG0554 Glycerol kinase 7 4 Op 2 6/0.000 - CDS 7002 - 7886 916 ## COG0524 Sugar kinases, ribokinase family 8 4 Op 3 . - CDS 7964 - 8365 569 ## COG1869 ABC-type ribose transport system, auxiliary component 9 4 Op 4 21/0.000 - CDS 8445 - 9497 1324 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 10 4 Op 5 4/0.000 - CDS 9501 - 11057 180 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 11 4 Op 6 3/0.000 - CDS 11089 - 11757 666 ## COG5618 Predicted periplasmic lipoprotein - Prom 11837 - 11896 1.5 12 4 Op 7 . - CDS 11931 - 12959 1242 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 13035 - 13094 4.2 - Term 13084 - 13126 5.6 13 4 Op 8 . - CDS 13129 - 14058 1036 ## COG3958 Transketolase, C-terminal subunit - Prom 14097 - 14156 80.4 - Term 14182 - 14224 5.6 14 5 Op 1 12/0.000 - CDS 14227 - 15084 860 ## COG3958 Transketolase, C-terminal subunit 15 5 Op 2 12/0.000 - CDS 15148 - 15609 489 ## COG3959 Transketolase, N-terminal subunit - Prom 15669 - 15728 80.3 - Term 15628 - 15694 31.6 16 6 Op 1 12/0.000 - CDS 15730 - 16062 333 ## COG3958 Transketolase, C-terminal subunit 17 6 Op 2 . - CDS 16055 - 16888 1058 ## COG3959 Transketolase, N-terminal subunit 18 6 Op 3 . - CDS 16891 - 18291 1502 ## COG2407 L-fucose isomerase and related proteins 19 6 Op 4 2/0.000 - CDS 18327 - 19334 989 ## COG1609 Transcriptional regulators - Prom 19408 - 19467 10.1 - Term 19735 - 19780 1.1 20 6 Op 5 . - CDS 19786 - 20784 1086 ## COG1609 Transcriptional regulators - Prom 20819 - 20878 6.3 - Term 20851 - 20895 12.4 21 7 Op 1 47/0.000 - CDS 20927 - 21301 479 ## PROTEIN SUPPORTED gi|240143815|ref|ZP_04742416.1| 50S ribosomal protein L7/L12 22 7 Op 2 . - CDS 21334 - 21909 619 ## PROTEIN SUPPORTED gi|240143816|ref|ZP_04742417.1| 50S ribosomal protein L10 - Prom 22100 - 22159 6.6 + Prom 22183 - 22242 8.7 23 8 Op 1 9/0.000 + CDS 22272 - 23000 591 ## COG3279 Response regulator of the LytR/AlgR family 24 8 Op 2 . + CDS 22997 - 24334 731 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 24335 - 24372 7.1 - Term 24369 - 24416 6.9 25 9 Tu 1 . - CDS 24500 - 25114 427 ## Elen_1195 hypothetical protein Predicted protein(s) >gi|224461042|gb|GG657762.1| GENE 1 2 - 188 129 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225571654|ref|ZP_03780650.1| ## NR: gi|225571654|ref|ZP_03780650.1| hypothetical protein CLOHYLEM_07754 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07754 [Clostridium hylemonae DSM 15053] # 1 62 34 95 96 124 100.0 2e-27 MKSFTVADGNGYFSSENGVLYDKKMETLLIYPIGNADTSFVLPDGVRTIRGFAFWSCLSL TK >gi|224461042|gb|GG657762.1| GENE 2 378 - 2525 1222 715 aa, chain - ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 253 713 724 1236 1734 179 29.0 2e-44 MGEKRKERILALLLSTAVLLGMTMPLAARAETPVAPSEGQIQSFLALPDNSTERKVPQGT AWEELNLPGELEAMVFRVQEEPAENGGETSAPSAENVPVTWESGPAYDSEKPGEYVLTPK PGEGYTVPKEVSLPRITVRVKEAQTNSALKSAPALQTVSAGTALTVEVTGNGTDAVKNAV EAELGGGNKADYTAIILTGSASELTEGNWGYIRGLYEEDSEWNSLTTLDLSGMSRLSKVE AEALNLQKSPAKLIAVTFPSSLETIGEAAFYRCSSLKETVFPNNLKSIKNDAFGYCAGLT GVTFPSSLETIGSGAFTGCISLTEVTFPSKLQTIESSAFTGCTSLTAFAVESESPYFTGK AGVLYDKKMETLLRYPEGKTDISFTIPDGVMTIGEGAFSIQPSLESVTFPSSLKTIEGYA FSNCTGLTEVTFPNNLESIGNNAFYFCRGLTEVTFSKNLTSIGTNAFNSCGSLASLTFTG STPPSVGSGAFANIAGGGRLYYPSDAPGYDAAWISGLNLSAGGGWSSGVYNLVVEVDNDA PGEVANKVTTALGGGNKADYTAITLRGDATEFTGDNWDYLRSLYKTGSDWTNLTILDLSE MDGLIKMGGSARNNIGRLTTVIFPDKLKTIGSNAFYGCGSLKNAVFPDGLRSIEDNAFGG CGSLAAAVFPSSLQTIGSYAFSGCRGLTEVTLPKNLETVGDFAFSECASMKSLAS >gi|224461042|gb|GG657762.1| GENE 3 2782 - 3504 542 240 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 198 2 196 234 97 29.0 2e-20 MKIAVCEDNNKERKALCEQIKTAMARQDVEAEIEEFGTAEELLKAAKKIFFSMFFLDFLL PGISGMDAALKLRREGNYSPVVFTTVTKDYLSQSFSSVWAVHYLLKPVEQEGVDEAFFRA LKVLEGAEKSLKIMVSRHFERIPYSDIYYIEGNNRNCIVHTRTGTYNPYESVQGMTEKLA DSRFLRSHRSYVINLDHVIAVQRGKAVMRDDMLIPIRRGETELVRRAWEERKFEIVGRNA >gi|224461042|gb|GG657762.1| GENE 4 3879 - 5360 1760 493 aa, chain - ## HITS:1 COG:TM0952 KEGG:ns NR:ns ## COG: TM0952 COG0554 # Protein_GI_number: 15643714 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Thermotoga maritima # 5 493 2 492 492 474 48.0 1e-133 MSDKFIISIDQSTQGTKALLFDGSGSLIRRTDKPHRQIVNEKGWVSHDPEEIYHNTIEVV TRLVTESGIAKEQIAGVGISNQRETSLAWERSTGAPLGQAIVWQCARAADICERVEKLGA AEQIRARTGMNLSPYFPASKIAWILEHVDGAKEKAAAGDICHGTIDSWLIYRLTGRTSYK TDYSNASRTQLFNIFTLRWDEEICGLFGIDPANLAEVCDSNADFGETDFEGLLPRPVPIH GVLGDSHGSLFGQGCRKPGMIKSTYGTGSSIMMNIGEEPVLSTHGVVTSLAWSMSGKVNY VLEGNLNYTGAVITWLKDDLKLISSPQETEALAREAVKDDRLYLVPAFSGLGAPYWDSRA AAAIVGMTRTTGRAEVARAGVECIAYQITDIVKAMSEDAKVKVEELRVDGGPTRNSYLMQ FQSDIAEAAVQVPDSEELSGIGPAYAAGLALGVWDERIFNKLKRVKYEPKMDGALRDRKY EGWKSAVSSVLTK >gi|224461042|gb|GG657762.1| GENE 5 5440 - 6093 777 217 aa, chain - ## HITS:1 COG:TM0953 KEGG:ns NR:ns ## COG: TM0953 COG3958 # Protein_GI_number: 15644625 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Thermotoga maritima # 1 215 92 305 311 199 46.0 5e-51 MAYSNTNVKLIGISGGVSYGALGMSHHSAQDIAAMAAVPNMRVHLPSDRLQTECLTRALL ADDKPAYIRVGRNAVDDVYEEGNVPFEMDKATFVTEGSDVAVIACGEMVKPAADAAAKLK EEGISVTVVDMYCVKPLDKEAVVKAAQNAKAVVTVEEHAPYGGLGSMVSQVVGSECPKKV VNLSLPDAPVITGTSKEVFQYYGLDAEGIVKTIKEVL >gi|224461042|gb|GG657762.1| GENE 6 6212 - 6988 927 258 aa, chain - ## HITS:1 COG:TM0952 KEGG:ns NR:ns ## COG: TM0952 COG0554 # Protein_GI_number: 15643714 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Thermotoga maritima # 5 254 2 250 492 270 49.0 2e-72 MSEKYIISIDQSTQGTKALLFDGSGSLIRRTDKPHRQIVNEKGWVSHDPEEIYHNTIEVV TRLVTESGIAKEQIAGVGISNQRETSLAWERSTGAPLGQAIVWQCARAADICERVEKLGA AEQIRARTGMNLSPYFPASKIAWILEHVDGAKEKAAAGDICHGTIDSWLIYRLTGRTSYK TDYSNASRTQFFNIFTLRWDEEICGLFGIDPANLAEVCDSNADFGETDFEGLLPRPVPIH GVLGDSHGSLFGQGCRKP >gi|224461042|gb|GG657762.1| GENE 7 7002 - 7886 916 294 aa, chain - ## HITS:1 COG:TM0960 KEGG:ns NR:ns ## COG: TM0960 COG0524 # Protein_GI_number: 15643720 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 7 289 9 292 299 140 36.0 4e-33 MKVLNFGSLNLDYVYSVDHMVTPGETLASYGMNVFCGGKGLNQSIALAKAGVTVYHAGMI GEEGDILLKTCRDGGVKADYIRKIEGRSGHTIIQVDKTGQNCILLYGGANQSITKEYVDE VLAHFEKGDILLLQNEVNMLDYIIDSAYEKGLMIILNPSPYNSALDRCDFNKISMFLLNE IEGAQVTGEEDTDKILAKLKEIYPDAKVVLTLGGDGSVYQYKEEICRQGIFKVKAVDTTA AGDTFTGYFISSIIEGMSVPAGLELAARASAIAVSREGATASIPLKEEVLNTEL >gi|224461042|gb|GG657762.1| GENE 8 7964 - 8365 569 133 aa, chain - ## HITS:1 COG:L85737 KEGG:ns NR:ns ## COG: L85737 COG1869 # Protein_GI_number: 15673620 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Lactococcus lactis # 1 131 1 132 132 115 50.0 3e-26 MKKRGIINAQLAGLIAGLGHKDLFMIADGGMPIPKGVELVDLALCGGVPTYRQVMDAVLG ETEVEAYTLAEEIVEKNPKLLAYIREKLPDADVEMISHVELKKMSGGIKFAVRTGEFTPY PNIILRAGVAFPA >gi|224461042|gb|GG657762.1| GENE 9 8445 - 9497 1324 350 aa, chain - ## HITS:1 COG:mll7011 KEGG:ns NR:ns ## COG: mll7011 COG1172 # Protein_GI_number: 13475840 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 17 343 1 325 332 288 56.0 7e-78 MAAKQKSGNNKLMMTLLKGRTFIVLIILLIFFSITADNFLSAGALLTVAKHVALYGILAI GMTYVIITGGIDLSVGSVAGLAGMIAGGLIQEGLTLKMFGVTLYFSVPMIVLITVLLGAL MGMINGLVITKCNVAPFIATLGTMYIWRGFANIRSNGATFSEISGSEGLGNTGFEVFGRN LGGTSIPCGVLILAIIAVVAGLILKKTPFGWHVLSIGGNEKASKLSGIKVDRVKIWVYAF SGFCSAVVGIIATSQLVSATPKTGESWEMNAIAASVLGGTSMAGGVGTIGGTIVGAFVIG VINDGMTMCGVTEFWQKIIRGLVIIIAVIIDQVQRNLQAKMALQARNENK >gi|224461042|gb|GG657762.1| GENE 10 9501 - 11057 180 518 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 280 487 12 215 245 73 26 9e-13 MGETYKCRDDVFLHAEKISKIYPGTKALDEVSFDLLKGKVNVLIGENGAGKSTLMKMIAG IEQPNEGKMYIGDREVFFKNTTEARKHGIGIIHQELSLFPNLNVYQNIYMNKEKTKGKVA LDNKTHMEGAKKVLERLEHPLDLHAKVGELRVGQQQMIEIARNLVEDDLKVLIMDEPTSS LSQQEVKVLFKIMRELTAAGISIVYISHRLEEIMEIGDHVTILRDGKYVADADVKEIDVP WIVHQMTGGAKSYPKRDREVDWNKVENVLEVKDLCLPKAGGGYLVDHLDFELKKGEVLGI YGLMGAGRSEVFECLMGLHPEHTGQVFMNGKELNIKSISQQIDNGFALIPEDRQAQGLVQ TLDIEKNCALSALKRYKKGPFLDSKKEAEKVEQEIKDIQIKVADKKLPILSLSGGNQQKV VIGKGILTEPKILLMDEPSRGIDIGAKTEVFDIINKYAEEGLSIIVISSELQEIVSIADR VIVLSNGIKTGEFFGDEIQQDTLVLASYKGHHIEEKES >gi|224461042|gb|GG657762.1| GENE 11 11089 - 11757 666 222 aa, chain - ## HITS:1 COG:mll7013 KEGG:ns NR:ns ## COG: mll7013 COG5618 # Protein_GI_number: 13475842 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Mesorhizobium loti # 17 222 16 216 221 103 32.0 3e-22 MKEAAMKKRMIALALTLTLAASTLLTGCGIVKVVKIGEEGKYTGDVEFNAGDDVEAIWEE SALPEMNENAVDLKEFLEESNGDLTALADEYGKYSMGDSGELSYVVKGSGTVEEVNTQSQ AGYIAIKLDGYNGTEVIKIQIGPVYKGSSIRDSLSFIKFGDYKNQEQWAAVSQSINEVVA KDVVEPAKPDSLQGKTISFVGAFTVSTGSSDVLITPVVLEAE >gi|224461042|gb|GG657762.1| GENE 12 11931 - 12959 1242 342 aa, chain - ## HITS:1 COG:YPO3318 KEGG:ns NR:ns ## COG: YPO3318 COG1879 # Protein_GI_number: 16123471 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 51 342 30 324 324 298 59.0 7e-81 MKGFKKVLAMLLAVAMVGAMVMGCSSKSDDSSKKEDKKEDKKTEDTKDEEALPGGGSNII YIITPSVSNPAFKAEADTATAKAKELGYEVKAASHDDDPTKQTELFDSAIADKAAAIICD NAGADATVEAVKKAREAGIPTFLIDREINEEGVAISQIVANNYQGAKAIAEKFVEAMGEK GKYVELLGKESDTNAGVRSSAFHEVIDQYPDMEMVAQQTANWEKTEAYDKMEAMLQANPD IEGVVCGNDTMLEGVCAALQAAGKTLPVIGVDGSDEAAALIKSGDATGTALQQFAVIAEM AVEQADKYLKEGSTGLDEKQLVDCIAITSENVDKLSGFVFTE >gi|224461042|gb|GG657762.1| GENE 13 13129 - 14058 1036 309 aa, chain - ## HITS:1 COG:TM0953 KEGG:ns NR:ns ## COG: TM0953 COG3958 # Protein_GI_number: 15644625 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Thermotoga maritima # 3 307 2 305 311 270 46.0 2e-72 MAKTANKQVMCEVLMEAAKKDKDVVALCSDSRGSASFTPFASGLPDQFVETGIAEQNLVS ISAGLAKCGKKPYAASPACFLSTRSYEQCKIDVAYSNTNVKLIGISGGVSYGALGMSHHS AQDIAAMAAVPNMRVYLPSDRLQTECLTRALLADDKPAYIRVGRNAVDDVYEEGNVPFEM DKATFVTEGSDVAVIACGEMVKPAADAAAKLKEEGISVTVVDMYCVKPLDKEAVVKAAQN AKAVVTVEEHAPYGGLGSMVSQVVGSECPKKVVNLSLPDAPVITGTSKEVFQYYGLDAEG IIKTIKEVL >gi|224461042|gb|GG657762.1| GENE 14 14227 - 15084 860 285 aa, chain - ## HITS:1 COG:TM0953 KEGG:ns NR:ns ## COG: TM0953 COG3958 # Protein_GI_number: 15644625 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Thermotoga maritima # 1 283 24 305 311 255 46.0 7e-68 MALCSDSRGSASFTPFANELPDQFVETGIAEQNLVSISAGLAKCGKKPYAASPACFLSTR SYEQCKIDVAYSNTNVKLIGISGGVSYGALGMSHHSAQDIAAMAAVPNMRVYLPSDRLQT ECLTRALLADDKPAYIRVGRNAVDDVYEEGNVPFEMDKATFVTEGSDVAVIACGEMVKPA ADAAAKLKEEGISVTVVDMYCVKPLDKEAVVKAAQNAKAVVTVEEHAPYGGLGSMVSQVV GSECPKKVVNLSLPDAPVITGTSKEVFQYYGLDAEGIIKTIKEVL >gi|224461042|gb|GG657762.1| GENE 15 15148 - 15609 489 153 aa, chain - ## HITS:1 COG:TM0954 KEGG:ns NR:ns ## COG: TM0954 COG3959 # Protein_GI_number: 15644626 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Thermotoga maritima # 1 146 132 276 286 164 54.0 6e-41 MALAGKMNGQDYRVYTVMGDGELAEGSVWEGAMAACQYKLDNLCAVVDRNRLQISGNTED VMGHDDLHERFGAFGWHVIDVADGNDIDQLHAAFEEAKTVKGQPTVLIANTVKGKGSSVM ENKANWHHKVPNEEELAQIRKDLAERKEAALHG >gi|224461042|gb|GG657762.1| GENE 16 15730 - 16062 333 110 aa, chain - ## HITS:1 COG:TM0953 KEGG:ns NR:ns ## COG: TM0953 COG3958 # Protein_GI_number: 15644625 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Thermotoga maritima # 3 101 2 100 311 89 47.0 1e-18 MAKTANKQVMCEVLMEAAKKDKDVVALCSDSRGSASFTPFANELPDQFVETGIAEQNLVS ISAGLAKCGKKPYAASPACFLSTRSYEQCKIDVAYSNTNVKRWNRKGLAS >gi|224461042|gb|GG657762.1| GENE 17 16055 - 16888 1058 277 aa, chain - ## HITS:1 COG:TM0954 KEGG:ns NR:ns ## COG: TM0954 COG3959 # Protein_GI_number: 15644626 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Thermotoga maritima # 4 270 12 276 286 301 53.0 1e-81 MSNLKALAYGLRETVIDMIVEGKAGHIGGDMSVLEILTELYFCQMNISPENQDDPDRDKF VMSKGHSVEAYYAVLAEKGFFDKKELISTFSKFGSKFIGHPNNKLPGVEMNSGSLGHGLP VCVGMALAGKMNGQDYRVYTVMGDGELAEGSVWEGAMAACQYKLDNLCAVVDRNRLQISG NTEDVMGHDDLHERFGAFGWHVIDVADGNDIDQLHAAFEEAKTVKGQPTVLIANTVKGKG SSVMENKANWHHKVPNEEELAQIRKDLAERKEAALHG >gi|224461042|gb|GG657762.1| GENE 18 16891 - 18291 1502 466 aa, chain - ## HITS:1 COG:TM0951 KEGG:ns NR:ns ## COG: TM0951 COG2407 # Protein_GI_number: 15643713 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Thermotoga maritima # 56 447 57 462 471 167 28.0 6e-41 MATIKLGFAPTRRSIFSAPDAIKYRGLTADRLRELGIDFVDIDDINEEGLLYDDNDVKKI AAKFKKEGVDGIMFPHCNFGTEYVCARLAKEMDVPVMLWGPLDERPEENGVRLRDTQCGL FATGKVLRRFQIPFTYVTNCRLNDPVFERGLRDFMAVCNVVKTFRNIRILQISTRPFDFW TTMCNEGELLEKFNVQLAPVPMTELTQEVKAVKEEGGRLAEMISYIRENMEVKIKDNEVE NVAALAVAMERLVEKYGCGAAAIQCWNALQTELGVMPCAANAILNDKGIPVVCETDIHGA ITALMVEAAGMGETRGFFADWTIRHPDIENGELLQHCGPWPISVAKEKPQLTYPLAFDHP GSLTAEAKHGDVTLCRFDGDNGEYSLLLGNAKGVDGPKGMGTYLWVEVENIKRLEAKIVE GPYIHHCVGIHKDIVPVLYEACKYIGVKPDFYDPIEEDVKAYLRGE >gi|224461042|gb|GG657762.1| GENE 19 18327 - 19334 989 335 aa, chain - ## HITS:1 COG:HI1635 KEGG:ns NR:ns ## COG: HI1635 COG1609 # Protein_GI_number: 16273524 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Haemophilus influenzae # 4 333 3 335 336 142 28.0 1e-33 MKVSIKKISQITGFSPATVSNALNRKKGVNPVTSEKILKAAETLGYQQGKTITKIKFVTY RKNGLIIDDSQIFPAMIEGVERQAKELGYETTFCHLNYEDESFEIRLKEFLEDTNCLVIL LGTEMTEEDYVPFYDYKGYLIVLDGWSDEMIFDGIMINNTDAVCNAMEYLVEKGHREIGY LRGDYRIKSFRYREYGYHRVMGRHRLVRKPEYEVTVGTKLESAYQDMKKYLEHTDRLPTA FFADNDVIAIGAMRAMKEKGIRIPEDISIVGFDDIRFGTVSTPGLTTVRVFKQEMGEVAV RRALDHIKYSGKDIKMKIQVCTQFIERDSVRQIER >gi|224461042|gb|GG657762.1| GENE 20 19786 - 20784 1086 332 aa, chain - ## HITS:1 COG:VCA0132 KEGG:ns NR:ns ## COG: VCA0132 COG1609 # Protein_GI_number: 15600903 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 4 332 3 333 334 144 26.0 3e-34 MKVSVRKISEITGFSPATVSNALNHKKGVNKETADRILKTAEELGYRLEEKISKIRFVIF RRNGLIIDDSPFHPAVIEGVERQAKSLGYETVFNHVDINDIEYNTQLQEILSDVESAIVL LGTEMQEEDFEPYTHAKNKIILLDGWSDRYFFDSVLISNTDSAARAVEYLIDKGHRDIGY LRGDFRIQAFCYREIGYRRVMDRHHLPVQPEYIATVGTKIETAYEGMRKYLEETPILPTA FFADNDTIAIGAMQALKERGYDIPGDVSIIGFDNISFGAISDPPLTTIHVYKHEMGEMAV RELMRSVEDGKKIKTKIQVCTDFVERASVRKI >gi|224461042|gb|GG657762.1| GENE 21 20927 - 21301 479 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240143815|ref|ZP_04742416.1| 50S ribosomal protein L7/L12 [Roseburia intestinalis L1-82] # 1 124 1 125 125 189 81 2e-47 MAKITTAEMIEAIKELSVLELNELVKACEEEFGVSAAAGVVVAAAGGEAAAAEEKDEFDV ELVSAGSSKVKVIKVVREITGLGLKEAKELVDGAPKVVKEGASKAEAEEIKAKLEGEGAE VNLK >gi|224461042|gb|GG657762.1| GENE 22 21334 - 21909 619 191 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240143816|ref|ZP_04742417.1| 50S ribosomal protein L10 [Roseburia intestinalis L1-82] # 1 187 1 187 187 243 67 1e-63 MAKVELKQPIVETIADEVKDAASVVLVDYRGLTVAQDTELRKQLRDAGIIYKVYKNTMMK RAFEGTEYAALEEHLAGPSAIAISKEDATAPARILCKFAKDAKALELKAGVIEGSVYDTA GLTELSKIPSREELLSKLLGSLQSPITNFARVIKQIAEQGGEVAAEEAPASEEAPAAAEA PAEETAEATEE >gi|224461042|gb|GG657762.1| GENE 23 22272 - 23000 591 242 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 232 2 230 234 102 28.0 8e-22 MNVAVVDDSLFDRQYLQDNIERYCSEHKVHMQIKTYDNGHGFLNSFSVHTYDLVFLDIFM DETSGIHIAEKIRQIDDRCQIIFTTSSQEHAIKAFRLHALDYLLKPYTYEQLEESLFRCQ TAMKRFSHYIELKEGRHYTRVLISDIIYTDYYNHYIQVHTLRNVIRSYMSFADFAPMLGK YPQFLWCYRNCMVNMDYIRSMDSKDFILSTDERIPISRARKNEIRQTYANYLFEYVTTGD TP >gi|224461042|gb|GG657762.1| GENE 24 22997 - 24334 731 445 aa, chain + ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 195 423 203 433 452 73 24.0 7e-13 MTQDIIISALLFILPCILILFLTFSDHLRTPTHATAAFSISCFMIIDMAATYIYYTKPLT AWTMILLSFAAMLAGVVLFRAASGYSFAQSLFSVAIVMCYTDSIYIFSSQFHYIAAGRLP DGPSALHTVSTLVISLATFPFVLLLFKRLLRPALDATESLAFWRISWGIPLCSRLLYYLT IFPIFSPNLPTSVQSDIYSAPTLWSIFTFFTYVIALKMVTETTKNARLQEELHISETQFA AQLKQSEMIQQRIEETMRIRHDFRHTLIALQACLDSKDYDGMGEFINNYICSLDSLRPTA YCDNPVVNAIISYYAEMARGDGITFSASVQLEQKLPLTDTDACIILGNLLENALEACQRQ TGTGRYIHVKLHAVHGSSLVIIIDNSYSGIIHKKEHVFLSTKAKNRKGIGIASVLDIVSK YEGVPRFEYDAETFKVSIFLHHSRN >gi|224461042|gb|GG657762.1| GENE 25 24500 - 25114 427 204 aa, chain - ## HITS:1 COG:no KEGG:Elen_1195 NR:ns ## KEGG: Elen_1195 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 29 147 1049 1166 1247 74 40.0 3e-12 VANAEEASTTFTVPAAHVTVTAHFTPSYSERTLRDPSTGVTVRGSFTEDAMLNVKSGTLH TGDDDSACATIRAYGKDNGGPLLLYDIRLSAGEVQGEVDVTIPVGVGYNGRTATVMHCHR RELEHIKVPVENGAVTGTFGGLSPFAVFVPGGSDGRGNSRSTGSGVQTGDPVELVSAALI MLASLAVCASMVFSRKRRCAKRHR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:38:37 2011 Seq name: gi|224461041|gb|GG657763.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_4, whole genome shotgun sequence Length of sequence - 1880 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 724 710 ## COG4886 Leucine-rich repeat (LRR) protein - Prom 786 - 845 80.3 2 2 Tu 1 . - CDS 847 - 1878 1028 ## Ccel_2644 cell wall/surface repeat protein Predicted protein(s) >gi|224461041|gb|GG657763.1| GENE 1 1 - 724 710 241 aa, chain - ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 14 187 391 583 656 58 29.0 9e-09 MIHYLEGLDGKYTEGKSEDKTGETDTVATANPTTFTGFTYDKNSEKNVTTGTITGDGKLV LKLYYTRDEHTVTYMVDGQQYGEIDTYKYDESVKDLRKEPTKEGYTFSGWDRTLPDKMGT EDIVVSGSFKVNSYNVTYELDGQPYGASERYEYGSDVTVRPAPEVPAGYHFSGWSQKEDF KMPAKDVKIEGSIIANDDTKYRVEHYKENLNGTFTLAEGRDETGTTGTPVTEAPKKYEGY T >gi|224461041|gb|GG657763.1| GENE 2 847 - 1878 1028 343 aa, chain - ## HITS:1 COG:no KEGG:Ccel_2644 NR:ns ## KEGG: Ccel_2644 # Name: not_defined # Def: cell wall/surface repeat protein # Organism: C.cellulolyticum # Pathway: not_defined # 2 340 1357 1695 2178 153 34.0 8e-36 EYEGFTYDAEAGENPLASGTIAGDGSLTLKLYYTRNSYNVTYKVDGAAYAGPQSYKYGEQ VSIEPDAVKEGYTFSGWSRKEAFEMPASDVEITGTFTANGDTKYTVKHYLEGLDGKYVEE ESEEWTGETDTVATANEKFFTGFTYDKNSEKNVTEGTITGDGKLVLKLYYTRDEHTVTYM VDGQQYGETDTYKYGQNTAPLREEPVKEGYTFSGWNGELPEVMGTEDVVISGSFTINSYN VAYELDGQPYGETERYEYGSDVSIRPAPEVPAGYHFSGWSQKEDFKMPAEDVKIEGSIIA NDDTKYRVEHYKENLDGTFTLAEGRDETGTTGTPVTEEPKKSS Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:38:43 2011 Seq name: gi|224461040|gb|GG657764.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_5, whole genome shotgun sequence Length of sequence - 1150 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 623 434 ## gi|225569795|ref|ZP_03778820.1| hypothetical protein CLOHYLEM_05889 - Prom 835 - 894 4.9 Predicted protein(s) >gi|224461040|gb|GG657764.1| GENE 1 2 - 623 434 207 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569795|ref|ZP_03778820.1| ## NR: gi|225569795|ref|ZP_03778820.1| hypothetical protein CLOHYLEM_05889 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05889 [Clostridium hylemonae DSM 15053] # 1 207 39 245 1161 381 98.0 1e-104 MGEKRKERILALLLSTAVLLGMTMPLAARAETPAAPSEGQIQSFLALPDNSTEREVPQGT AWEELNLPGELEAMVFRVQEEPAENGGETPAPSAENVPVMWESGPAYDSEKPGEYVLTPK PGEGYTVPKEVSLPRITVRVKEAQTNSALKSAPALQTVSAGTALTVEVTGNGTDAVKNAV EAELGGGNKADYTAIILTGSASELTEG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:38:54 2011 Seq name: gi|224461039|gb|GG657765.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_6, whole genome shotgun sequence Length of sequence - 871 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 1 - 322 507 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 2 1 Op 2 . - CDS 350 - 871 537 ## COG1940 Transcriptional regulator/sugar kinase Predicted protein(s) >gi|224461039|gb|GG657765.1| GENE 1 1 - 322 507 107 aa, chain - ## HITS:1 COG:BS_gutB KEGG:ns NR:ns ## COG: BS_gutB COG1063 # Protein_GI_number: 16077682 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Bacillus subtilis # 5 107 9 111 353 121 53.0 3e-28 MDGMMKVAVMNGIGEMGYTERPIPQAKDDEVVVKLEYVGICGSDMHYYEMGRIGDYIVEP PFVLGHEPGGTVVETGKNVKHLKPGDRVALEPGKTCGKCRFRKEGKY >gi|224461039|gb|GG657765.1| GENE 2 350 - 871 537 173 aa, chain - ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 35 167 234 375 385 68 30.0 6e-12 EVLLERANGIKEGLEENCDKGNYKIVAELEPKRFEFGHMVIHPGGKTCYCGKKGCVDAYC SALCLAEHTDGYLERFFDRLEDEDAELMEVWETYLDDLAITVDNLRMCFDCDIVLGGYVG SCIGPYMKELQKRVEEKNIFEGNGEYVRACKYQKAASALGAAVYYIENFINSI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:38:55 2011 Seq name: gi|224461038|gb|GG657766.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_7, whole genome shotgun sequence Length of sequence - 837 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 836 524 ## gi|225569504|ref|ZP_03778529.1| hypothetical protein CLOHYLEM_05590 Predicted protein(s) >gi|224461038|gb|GG657766.1| GENE 1 2 - 836 524 278 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569504|ref|ZP_03778529.1| ## NR: gi|225569504|ref|ZP_03778529.1| hypothetical protein CLOHYLEM_05590 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05590 [Clostridium hylemonae DSM 15053] # 1 278 665 942 1141 531 100.0 1e-149 ISKNADGTIQVEQPGRGTVTLLQKKLAISEGTTLDSWKILYGDEDYKTQPLVEIEEGAEV EIVLDGDVLQRLPGYTANAIEGQDNVVLKLDTAATSTITGDIHLGDNSILKAGVVTVEGD VTADQVNVETSGILIVRNTLTARKMITDQAVVYADSLKAGDFAVFNESFVYFQDISGSVL PTLNHSIFGVAKGFTGVLKDSDNQTLKKTDISLPLLMSHGDYPFPALKEVIFSADQGENW HTADLSEKNVSYDIFNNLFMTDTPVLYVQDDVFDVLVK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:09 2011 Seq name: gi|224461037|gb|GG657767.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_8, whole genome shotgun sequence Length of sequence - 825 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 101 - 196 167 ## + Prom 200 - 259 2.2 2 2 Tu 1 . + CDS 315 - 746 533 ## COG1959 Predicted transcriptional regulator + Term 775 - 806 1.0 Predicted protein(s) >gi|224461037|gb|GG657767.1| GENE 1 101 - 196 167 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKHMKRVSFVLLGAASGFAYYVFIGCRSGG >gi|224461037|gb|GG657767.1| GENE 2 315 - 746 533 143 aa, chain + ## HITS:1 COG:SMc01160 KEGG:ns NR:ns ## COG: SMc01160 COG1959 # Protein_GI_number: 15964112 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Sinorhizobium meliloti # 3 130 5 130 152 62 30.0 3e-10 MTSEFAIAVHALVYLRHKDTVVSSEELAENICTNPARVRKVMAKLKKKALVGTKEGIKGG YHMAADASAVTLRCVCDALEEEVIKASWKSGSIDMDCMIASGMAGMMDGIYSEMNAQCKD YLETVTIEDVEKKVTGCPKKQKI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:13 2011 Seq name: gi|224461036|gb|GG657768.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_9, whole genome shotgun sequence Length of sequence - 817 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 75 - 413 156 ## + Prom 341 - 400 2.5 2 2 Tu 1 . + CDS 477 - 816 236 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|224461036|gb|GG657768.1| GENE 1 75 - 413 156 112 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTGFEKVLNLRKDLINIGCQLNFQSGTLLYGFLTETSQCLKIHHIEIEEADESEVVLHH KSFSNHVSVDLICLSFANVIFSHLTGFDGVQHTHLVKLSNKVSNKVVTVVCR >gi|224461036|gb|GG657768.1| GENE 2 477 - 816 236 113 aa, chain + ## HITS:1 COG:FN1676 KEGG:ns NR:ns ## COG: FN1676 COG3547 # Protein_GI_number: 19704997 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 4 113 196 305 391 98 44.0 3e-21 MTHLANLLKVNSHGHFTKEQAKELRVLAQKSVGANDSAISIQITQTIQQIELLDSQLEKI EAEMTDIMKFNDSVIMTIPGIGYINGGMILGEIGDIHRFSNPNKLLAFAGLDP Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:20 2011 Seq name: gi|224461035|gb|GG657769.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_10, whole genome shotgun sequence Length of sequence - 790 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 6 - 65 7.5 1 1 Tu 1 . + CDS 162 - 789 881 ## COG1879 ABC-type sugar transport system, periplasmic component Predicted protein(s) >gi|224461035|gb|GG657769.1| GENE 1 162 - 789 881 209 aa, chain + ## HITS:1 COG:YPO1293 KEGG:ns NR:ns ## COG: YPO1293 COG1879 # Protein_GI_number: 16121576 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 49 201 43 195 362 120 39.0 2e-27 MKKRLLSVLLCVAMTASMVIGCGAKEEKKDDSAKTESSDNKDGKIYLLHKGLDYYAWAAM QEAFDKYAGDLDCNYEILNAENDVSKQVEQFKTVLTQDPKAIIVTAIDSESLIDCVKEAN DAGIPVGVYDTPITGGDIDITVDCDNLMAGQQAAEIIVDKLKEKNGEEKGKVLNVFGDLA SQVMQERKQGFDNVMEKYPNIEVIEASGK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:21 2011 Seq name: gi|224461034|gb|GG657770.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_11, whole genome shotgun sequence Length of sequence - 775 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 773 551 ## COG3291 FOG: PKD repeat Predicted protein(s) >gi|224461034|gb|GG657770.1| GENE 1 2 - 773 551 257 aa, chain + ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 17 192 640 839 1734 77 33.0 2e-14 FNNCGFTGGLDQTGLTNLTTIGGFAFNNCGFTGGLDLTGLTNLTTMGEYAFSDCGFSSAR LPAQMTVIPPGLFSGCRNLAAAELPSGLTQIGVDAFSYCGFTGTLDLSGYARLTTISGGA FWGNAALTEVRLPAGLTSLGDRAFQECSSLTSLRFYGADAPAIGSYIFSAMAANATTGTV YYPFGGAGYSADAFDIGKDLAQFGRWTFTTFNATAPVLKAGTAVRTSDMAANVTFTSSRA GWYYYAVVDSGAARPAI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:22 2011 Seq name: gi|224461033|gb|GG657771.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_12, whole genome shotgun sequence Length of sequence - 770 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 768 843 ## COG1882 Pyruvate-formate lyase Predicted protein(s) >gi|224461033|gb|GG657771.1| GENE 1 3 - 768 843 255 aa, chain - ## HITS:1 COG:AF1449 KEGG:ns NR:ns ## COG: AF1449 COG1882 # Protein_GI_number: 11499044 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Archaeoglobus fulgidus # 6 252 191 434 776 160 37.0 2e-39 DPEALDKKNELEGMKIACDAIMILGERYAALARDLAQKETDPKRREELLQIAANCDVVPA HKPETYWQAIQMYWFVHLGVTSELNPWDAYSPGRLDQHLNPFYEKDVEAGVLDDEKALEL LECLWVKFNNQPAPPKVGITLKESSTYTDFANLNTGGIAPNGENGVNNVSYLILDCMDEM KLLQPSSNVQISRKTPQKFLKRACEISRKGWGQPAFYNTEAIVQELLNAGKSLEDARRGG TSGCVETGAFGNEAY Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:22 2011 Seq name: gi|224461032|gb|GG657772.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_13, whole genome shotgun sequence Length of sequence - 764 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 306 421 ## gi|225569600|ref|ZP_03778625.1| hypothetical protein CLOHYLEM_05694 - Prom 374 - 433 3.7 2 2 Tu 1 . - CDS 466 - 570 102 ## gi|225569601|ref|ZP_03778626.1| hypothetical protein CLOHYLEM_05695 Predicted protein(s) >gi|224461032|gb|GG657772.1| GENE 1 3 - 306 421 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569600|ref|ZP_03778625.1| ## NR: gi|225569600|ref|ZP_03778625.1| hypothetical protein CLOHYLEM_05694 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05694 [Clostridium hylemonae DSM 15053] # 1 101 9 109 258 153 100.0 4e-36 MILAALMLGGCSGRLSDEYITIDKYEGIEVEKAEVTDTTDEEIDKVVARMMEGYTAQHDL PEDTKITDAIVKETLSDTAETVEQYRLELKKQIDAAKEKAA >gi|224461032|gb|GG657772.1| GENE 2 466 - 570 102 34 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569601|ref|ZP_03778626.1| ## NR: gi|225569601|ref|ZP_03778626.1| hypothetical protein CLOHYLEM_05695 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05695 [Clostridium hylemonae DSM 15053] # 1 34 262 295 295 72 100.0 1e-11 MQYLEVVTIFEDEDDAVYDGMKKTMDYLHRELGC Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:34 2011 Seq name: gi|224461031|gb|GG657773.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_14, whole genome shotgun sequence Length of sequence - 759 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 759 535 ## Cwoe_2742 peptidase M24 Predicted protein(s) >gi|224461031|gb|GG657773.1| GENE 1 3 - 759 535 252 aa, chain + ## HITS:1 COG:no KEGG:Cwoe_2742 NR:ns ## KEGG: Cwoe_2742 # Name: not_defined # Def: peptidase M24 # Organism: C.woesei # Pathway: not_defined # 7 252 15 275 406 98 32.0 2e-19 KKVTDELKKAGADLAVLISPSNVTYAGDYEVPYWPAFMGDMCRGLPMAAACIGAESGVLW NVISDFYKSRLERAGKKQVICYPSFSHIERHDPAQNFKKALLDAVRRCIGTAGRITVGVE EEHCPQVVLEILREAYPDAAFVNISGSMERARYIKTPEEIALLERAARVADAAQERLYEI SRKEGDYTELDIWFEVQKAVSGENKSLTPFVGELVSGPRAGLSDYPLGPSDRKVERGDIA IMDISPRVEGYW Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:39 2011 Seq name: gi|224461030|gb|GG657774.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_15, whole genome shotgun sequence Length of sequence - 758 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 497 535 ## gi|225569735|ref|ZP_03778760.1| hypothetical protein CLOHYLEM_05829 - Prom 569 - 628 2.9 - Term 580 - 615 7.4 2 2 Tu 1 . - CDS 649 - 756 135 ## COG0050 GTPases - translation elongation factors Predicted protein(s) >gi|224461030|gb|GG657774.1| GENE 1 2 - 497 535 165 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569735|ref|ZP_03778760.1| ## NR: gi|225569735|ref|ZP_03778760.1| hypothetical protein CLOHYLEM_05829 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05829 [Clostridium hylemonae DSM 15053] # 1 165 1 165 512 312 100.0 6e-84 MRRWKMKALAFALIMASVLSLAACGQSVKKYDDKSAYGEFLQETEKKNEGLSAPESIPDE YFYKAGRDKETFGGTDFDLWQTVKEQKEMAPWISKEDAEQELAWFLRLLRSYYGNYGRSG GDEAFEVAAGNVMKAFEGDRKKEFGEYEELLGREFAFAVDNDRHF >gi|224461030|gb|GG657774.1| GENE 2 649 - 756 135 35 aa, chain - ## HITS:1 COG:HI0578 KEGG:ns NR:ns ## COG: HI0578 COG0050 # Protein_GI_number: 16272522 # Func_class: J Translation, ribosomal structure and biogenesis # Function: GTPases - translation elongation factors # Organism: Haemophilus influenzae # 1 35 360 394 394 58 80.0 3e-09 TIELIHPVAMEQGLRFAIREGGRTVGSGRVAKIIE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:49 2011 Seq name: gi|224461029|gb|GG657775.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_16, whole genome shotgun sequence Length of sequence - 757 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 335 307 ## gi|225569746|ref|ZP_03778771.1| hypothetical protein CLOHYLEM_05840 2 1 Op 2 . + CDS 328 - 757 430 ## Closa_3275 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Predicted protein(s) >gi|224461029|gb|GG657775.1| GENE 1 3 - 335 307 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569746|ref|ZP_03778771.1| ## NR: gi|225569746|ref|ZP_03778771.1| hypothetical protein CLOHYLEM_05840 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05840 [Clostridium hylemonae DSM 15053] # 1 110 98 207 207 211 100.0 1e-53 DVEAIALGIGQVADVFERAGAGIILAAPPVLADLEKSPFYNEFGTGAEEKSRKLAACYES LALRRGWRYLNAEKVTSAGEYDKIHLDKEGHRRLAEAVYQMIARKEERDE >gi|224461029|gb|GG657775.1| GENE 2 328 - 757 430 143 aa, chain + ## HITS:1 COG:no KEGG:Closa_3275 NR:ns ## KEGG: Closa_3275 # Name: not_defined # Def: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase # Organism: C.saccharolyticum # Pathway: Arginine and proline metabolism [PATH:csh00330]; Metabolic pathways [PATH:csh01100]; Biosynthesis of secondary metabolites [PATH:csh01110] # 3 143 2 142 426 154 45.0 2e-36 MNKRIEKALEENKQKYIDYLLKLVSIDTHDIGHGIEGGLEAEGQDFMAELFCGLGAEEVV KDPLKEDSIVKCKEQYREGNTGHNYDNRYNVYASFKGKSERSILFNGHIDHMPAENEENW CIPPLSPAVIENRITGLGVADMK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:39:59 2011 Seq name: gi|224461028|gb|GG657776.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_17, whole genome shotgun sequence Length of sequence - 754 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 134 - 193 4.6 1 1 Tu 1 . + CDS 278 - 643 177 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis Predicted protein(s) >gi|224461028|gb|GG657776.1| GENE 1 278 - 643 177 121 aa, chain + ## HITS:1 COG:CAC2330 KEGG:ns NR:ns ## COG: CAC2330 COG2148 # Protein_GI_number: 15895597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 2 106 339 443 461 137 60.0 3e-33 MTRIDELPQLINIIKGDMSVVGPRPERPEIEAKYLKELPEFELRLKVKAGLTGYAQVFGK YNTTPYDKLRLDLLYINEQSVLLDLKLIVWTIKILFIPESTEGIEEGRKTPSNISGGNRK Y Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:00 2011 Seq name: gi|224461027|gb|GG657777.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_18, whole genome shotgun sequence Length of sequence - 730 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 730 473 ## COG1362 Aspartyl aminopeptidase Predicted protein(s) >gi|224461027|gb|GG657777.1| GENE 1 1 - 730 473 243 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 1 243 2 252 433 224 44.0 8e-59 KMETDITQELFTFIERSPSPYHTVGTAAEMLTAKGYERLEEQCTWELKKGGRYFVTRNLS SIIAFRIPEEACGGFHIMASHGDSPSFKIKEHPETVSDGKYVRLNVEKYGGMIMASWLDR PLSAAGRLLVRNGSAVTTRLVNADRDLLLIPNLAIHMNREVNEGYKYNPQKDMLPLYGEF TAKGTFMQLMAEAAGVSGDDILGSDLFLYNRMPGTVWGADDAFISSARLDDLQCAFASLK GFL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:00 2011 Seq name: gi|224461026|gb|GG657778.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_19, whole genome shotgun sequence Length of sequence - 721 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 721 610 ## ELI_1104 hypothetical protein Predicted protein(s) >gi|224461026|gb|GG657778.1| GENE 1 1 - 721 610 240 aa, chain - ## HITS:1 COG:no KEGG:ELI_1104 NR:ns ## KEGG: ELI_1104 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 234 257 482 500 81 25.0 2e-14 VAIRILYEIYMGEFREREYLPSYEKMAQRFNVSLSTVRRTINVLNQVGAAESVNGVGTRI FSMGKRCREPDLSSLAVRQNLALFFQSFELLIYSCEEVLGRLLVEMRQSEREELLDCLEE NRNTGQCAKSLWHMLIWTARYSTLSSVREIYARIFGLFLWGYPLRGSKNETTELELADVQ LTDALIQALREGEYARCAVLVKEKLLKEFPMVEVYLRRNKIYEGELRSSISIRLMLTDVK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:05 2011 Seq name: gi|224461025|gb|GG657779.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_20, whole genome shotgun sequence Length of sequence - 709 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 570 358 ## Dtox_3883 KilA domain-containing protein Predicted protein(s) >gi|224461025|gb|GG657779.1| GENE 1 1 - 570 358 189 aa, chain + ## HITS:1 COG:no KEGG:Dtox_3883 NR:ns ## KEGG: Dtox_3883 # Name: not_defined # Def: KilA domain-containing protein # Organism: D.acetoxidans # Pathway: not_defined # 1 184 103 286 290 246 69.0 2e-64 TRAIGLYVKRGKYGGTYAHKDIAFEFASAISPTFKLYLIKEFQRLKEEENDKKQIEWNAK RFLSKNNYLIQTDAVKNYLIPQNTYSENLEWLAYAEEADILNVALFGFTAKAWRDANPEL AGKNNVRDYATVNELTVLSNLETHNAHMIREGKDKKERFNTLKEIAEYQLGILNTAEYIK TDDKNKSIT Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:09 2011 Seq name: gi|224461024|gb|GG657780.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_21, whole genome shotgun sequence Length of sequence - 707 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 74 - 707 626 ## COG1609 Transcriptional regulators Predicted protein(s) >gi|224461024|gb|GG657780.1| GENE 1 74 - 707 626 211 aa, chain + ## HITS:1 COG:BH2923 KEGG:ns NR:ns ## COG: BH2923 COG1609 # Protein_GI_number: 15615486 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 45 211 4 166 344 71 30.0 1e-12 MNRFILTALTTIYYQYYFNSPYRIIKLYWFKLKQQGWHMGKKNPTLRDVAKLAGVAVGTI SNYLNNPDGVKEKNRERIENAIKVLHFTPNTMAQRLASGRTNTILLYILSEQEIGDSTWL HQLPLIQAINDRLHKTRYNLQIKIGQIGEEEYSLGYMEDCIQGRIIDGAAILSAWEVPKE MLKLFLREDFPYVLLENKSDFTNHACIQFDN Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:09 2011 Seq name: gi|224461023|gb|GG657781.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_22, whole genome shotgun sequence Length of sequence - 701 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 116 142 ## gi|225569431|ref|ZP_03778456.1| hypothetical protein CLOHYLEM_05516 - Prom 141 - 200 2.3 2 2 Tu 1 . - CDS 304 - 699 330 ## COG0679 Predicted permeases Predicted protein(s) >gi|224461023|gb|GG657781.1| GENE 1 2 - 116 142 38 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569431|ref|ZP_03778456.1| ## NR: gi|225569431|ref|ZP_03778456.1| hypothetical protein CLOHYLEM_05516 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05516 [Clostridium hylemonae DSM 15053] # 1 38 32 69 360 79 100.0 6e-14 MEENTSFIPEIYIGENGNWFINNYDTGVKARGDDGITP >gi|224461023|gb|GG657781.1| GENE 2 304 - 699 330 131 aa, chain - ## HITS:1 COG:FN0623 KEGG:ns NR:ns ## COG: FN0623 COG0679 # Protein_GI_number: 19703958 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 128 188 315 318 63 31.0 6e-11 VLKIPMPHVMEKTVSNVAGMATPMGLIAMGASFDIKKAFAKVKPSLTAAALKLIGFCSLF LPVAIQMGFREEKLVAILVMLGSATTVSCFVMAKNMGHEGVLSSSVIMLTTFLSAFTLTG WLYILKSLGML Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:15 2011 Seq name: gi|224461022|gb|GG657782.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_23, whole genome shotgun sequence Length of sequence - 700 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 524 572 ## COG1609 Transcriptional regulators Predicted protein(s) >gi|224461022|gb|GG657782.1| GENE 1 2 - 524 572 174 aa, chain - ## HITS:1 COG:BH3241 KEGG:ns NR:ns ## COG: BH3241 COG1609 # Protein_GI_number: 15615803 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 174 1 168 333 125 37.0 4e-29 MRTTIKDIANYTGFSVTTISLVLNNKADKIPKSTKNKILDAVEKLNYHPNQLAVGLVKKR TQTIGLIISDVSNVFFSTLAKGVEDSCRSQGWNLILCNTNDKHERDMSYIQVLANKGVDG ILFCMARDSDKKKTEESIQLLKKLKIPFVMIDRYLEEADCSSVIVDHRQGGYAA Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:16 2011 Seq name: gi|224461021|gb|GG657783.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_24, whole genome shotgun sequence Length of sequence - 691 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 40 - 681 813 ## COG0274 Deoxyribose-phosphate aldolase Predicted protein(s) >gi|224461021|gb|GG657783.1| GENE 1 40 - 681 813 213 aa, chain + ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 4 212 6 214 220 248 63.0 7e-66 MASYIDHTLLKADAAKENILQICREAEQYHFASVCVNPAWISLVSEQLKETGVKACCVIS FPLGSETPEMKAMEAAYVIGQGAQEVDMVVNIGAVKSGDWELVNKDIRAVTAVKKDALVK VIIETCLLTDEEKVKVCEIAKEAGADFVKTSTGFSKGGATAHDVALMRKTVGSGVGVKAS GGVRTLEDAEKMLAAGADRLGASAGKEIIRSLV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:16 2011 Seq name: gi|224461020|gb|GG657784.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_25, whole genome shotgun sequence Length of sequence - 690 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 13 - 72 2.4 1 1 Tu 1 . + CDS 93 - 690 630 ## SpiBuddy_2449 cell wall/surface repeat protein Predicted protein(s) >gi|224461020|gb|GG657784.1| GENE 1 93 - 690 630 199 aa, chain + ## HITS:1 COG:no KEGG:SpiBuddy_2449 NR:ns ## KEGG: SpiBuddy_2449 # Name: not_defined # Def: cell wall/surface repeat protein # Organism: Spirochaeta_Buddy # Pathway: not_defined # 21 186 1069 1230 1444 78 33.0 1e-13 MPDGKQYIKDSSATVSTKIPVREGYNFDSWNTKADGSGTTYAGGETFTISEDTTLYAQWL PKGDTKYVIEYYLQNDDGTYPDSASRTDIREGTTGAIVNSGEIGIDGYTYDEEHKLNVST GEVKADGSLVLKRYYKKQFTVTYDPGTHGAFEAQVYDKQYYGEATPKFDGETAAEDGYTF KGWNPEVKEKVSGNITYTA Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:21 2011 Seq name: gi|224461019|gb|GG657785.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_26, whole genome shotgun sequence Length of sequence - 684 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 684 822 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 Predicted protein(s) >gi|224461019|gb|GG657785.1| GENE 1 1 - 684 822 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 226 185 409 815 321 68 1e-88 LDPVIGRDSEIRNLVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPEALKDKT IFSLDMGALVAGAKYRGEFEERLKAVLEEVKNSDGKIILFIDELHTIVGAGKTDGAMDAG NMLKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQPVLVDEPTVEDAISILRGLKER YEVFHGVKITDGALVAAATLSDRYISDRFLPDKAIDLVDEACALIKTE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:21 2011 Seq name: gi|224461018|gb|GG657786.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_27, whole genome shotgun sequence Length of sequence - 682 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 680 796 ## COG1190 Lysyl-tRNA synthetase (class II) Predicted protein(s) >gi|224461018|gb|GG657786.1| GENE 1 2 - 680 796 226 aa, chain + ## HITS:1 COG:CAC3197 KEGG:ns NR:ns ## COG: CAC3197 COG1190 # Protein_GI_number: 15896444 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 1 226 88 313 515 288 61.0 6e-78 KASFCNVLDQSGNIQSYVARDSLGEEAYKEFKKLDIGDIVGLEGEVFKTKTGEISIHATA VKLLSKSLQILPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTFIKRSHIISAIRRYLDGQG FLEVETPMLVSNAGGAAARPFETHFNALSEDFKLRISLELYLKRLIVGGLEKVYEIGRVF RNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGT Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:22 2011 Seq name: gi|224461017|gb|GG657787.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_28, whole genome shotgun sequence Length of sequence - 675 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 457 525 ## COG1878 Predicted metal-dependent hydrolase 2 1 Op 2 . + CDS 484 - 673 66 ## COG3395 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|224461017|gb|GG657787.1| GENE 1 2 - 457 525 151 aa, chain + ## HITS:1 COG:PM1362 KEGG:ns NR:ns ## COG: PM1362 COG1878 # Protein_GI_number: 15603227 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pasteurella multocida # 1 150 75 224 224 122 42.0 2e-28 YEKPYIIDIPKGFNELITAEELKPYAEQIKQCDLLMLRTGHSRYHDTDEEIYGAKGPGVG SDAAEYLNKNFPNMRGIIMDFISLATYTDPDDGNKAHKWLLGEWSGHYSTIIEDATLEGL DNDTLVRVFSLPIRYGEVDSCQVSVLAEIRD >gi|224461017|gb|GG657787.1| GENE 2 484 - 673 66 63 aa, chain + ## HITS:1 COG:ygbK KEGG:ns NR:ns ## COG: ygbK COG3395 # Protein_GI_number: 16130644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 8 62 4 57 388 65 60.0 2e-11 METNKLLLGCIADDFTGAGDIASFLTRGGLRTILISGIPAAGDIPKDADAVVISLKSRTA PVR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:23 2011 Seq name: gi|224461016|gb|GG657788.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_29, whole genome shotgun sequence Length of sequence - 675 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 650 388 ## COG0044 Dihydroorotase and related cyclic amidohydrolases Predicted protein(s) >gi|224461016|gb|GG657788.1| GENE 1 3 - 650 388 215 aa, chain + ## HITS:1 COG:DR1153 KEGG:ns NR:ns ## COG: DR1153 COG0044 # Protein_GI_number: 15806173 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Deinococcus radiodurans # 1 213 228 443 448 160 40.0 2e-39 ARITGAGVHIAHISSAKSIALIQEARRQGARITCETCPHYLMFSEEDYPDKGAMLKCAPP VRGMRNRDALWEELKCGHIDIISSDHSPSADKSVTDAVDRAWAGISGVQFTLPVLFSEGC CKRKMPPERIAEVLSLRPAELLGIDKSKGSIELGKDADLAVLNPEKQTIYDENQIKTKVK NSVYKDMCLQGTVERTFLRGAEAGGSKPRGRYICR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:24 2011 Seq name: gi|224461015|gb|GG657789.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_30, whole genome shotgun sequence Length of sequence - 670 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 42 - 669 457 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) Predicted protein(s) >gi|224461015|gb|GG657789.1| GENE 1 42 - 669 457 209 aa, chain + ## HITS:1 COG:PH1046 KEGG:ns NR:ns ## COG: PH1046 COG2309 # Protein_GI_number: 14590883 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Pyrococcus horikoshii # 2 206 96 300 350 171 37.0 6e-43 MWIYGSGAYSEIMKKNTSLRHMCLTGATGELLAHCIGNIRYDALQAFGLKLAEKIQNARC MRMTTEKGMDISFENIQGRPVLKELGDAGNPGTNMLPGQIAWTPLIESVNGTLVFDGALA PVCGVPSEPVRIKVVDGSVKEVAGGKEAEAYLKWLKSFEHSQMFGISHTGIGINPGALLS GDILQEQRVWGSVTWAFGSIGGNLVPPDG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:24 2011 Seq name: gi|224461014|gb|GG657790.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_31, whole genome shotgun sequence Length of sequence - 669 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 491 390 ## COG0789 Predicted transcriptional regulators 2 1 Op 2 . - CDS 526 - 669 126 ## gi|225569820|ref|ZP_03778845.1| hypothetical protein CLOHYLEM_05914 Predicted protein(s) >gi|224461014|gb|GG657790.1| GENE 1 2 - 491 390 163 aa, chain - ## HITS:1 COG:all0345_1 KEGG:ns NR:ns ## COG: all0345_1 COG0789 # Protein_GI_number: 17227841 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 14 117 20 127 135 76 40.0 2e-14 MKKEYTCEVKMEDKLYRIGMFAAMNHVTIKALRYYDEQNLLKPVYVDSTTGYRYYTSGQL PEIHRILALRGMGFSLEEIRSIQAGHSEMEMLAARKRQLLSEIAEITARIAEVESYLSAD KIDTEHHVLIKALPEVITASMRKRISRYGALFDFMPFMGREME >gi|224461014|gb|GG657790.1| GENE 2 526 - 669 126 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569820|ref|ZP_03778845.1| ## NR: gi|225569820|ref|ZP_03778845.1| hypothetical protein CLOHYLEM_05914 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05914 [Clostridium hylemonae DSM 15053] # 1 47 200 246 246 84 95.0 3e-15 VPLTQGIKMMKEISVGSPVKNVAGIVRLLTAVTAICCFAAKLTFRWE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:29 2011 Seq name: gi|224461013|gb|GG657791.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_32, whole genome shotgun sequence Length of sequence - 666 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 90 - 149 3.4 1 1 Tu 1 . + CDS 183 - 666 75 ## SPCG_1125 hypothetical protein Predicted protein(s) >gi|224461013|gb|GG657791.1| GENE 1 183 - 666 75 161 aa, chain + ## HITS:1 COG:no KEGG:SPCG_1125 NR:ns ## KEGG: SPCG_1125 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 135 2 139 312 82 34.0 5e-15 MMETYVAQSLNEYIELIAKIGSNGTEKWYRGQSNCEYRLTPSALRKVFAIEDQRGYKLNQ PILDDTCSGSNNVVAFLPVDRMVTEFSEKAKDCLEYDVSTRIEWECIAQHYGIPTRILDW TTNAINALFFAVGDCSIGQTKEDDIRHFFDSQGFGSGGGAV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:33 2011 Seq name: gi|224461012|gb|GG657792.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_33, whole genome shotgun sequence Length of sequence - 663 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 66 - 659 304 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 Predicted protein(s) >gi|224461012|gb|GG657792.1| GENE 1 66 - 659 304 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 193 2 196 245 121 36 1e-28 MTLDNVRKVYHMGEVEIVAADGIDFQIEKGEFAVVVGPSGAGKTTVLYILGGMDTATEGR VQVDGETISGYNARQLTAYRRDDIGFVFQFYNLIPNLTALENVELALQICRDPMDAEEVL RDVGLGERLSNFPAQLSGGEQQRVSIARALAKNPKLLLCDEPTGALDYNTGKSILKLLQD TCREKGMTVILITQLEP Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:34 2011 Seq name: gi|224461011|gb|GG657793.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_34, whole genome shotgun sequence Length of sequence - 654 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 2 - 488 435 ## COG3959 Transketolase, N-terminal subunit 2 1 Op 2 . - CDS 523 - 654 91 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Predicted protein(s) >gi|224461011|gb|GG657793.1| GENE 1 2 - 488 435 162 aa, chain - ## HITS:1 COG:TVN0668 KEGG:ns NR:ns ## COG: TVN0668 COG3959 # Protein_GI_number: 13541499 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Thermoplasma volcanium # 1 162 1 160 273 192 56.0 2e-49 MEEKRVKELALTAAKIRRKALEAIEAAHSGHVGGSFSVADILAVLYFEKMHIEPSDPKNP DRDRFVLSKGHCTPTMYATLALRGYFPVDDLMTFRNVDSYLSGHVEMTKVPGVDMSAGSL GQGLSAAVGMALCGKVDKKDYRVFAALGDGEIQEGQVWEAAM >gi|224461011|gb|GG657793.1| GENE 2 523 - 654 91 43 aa, chain - ## HITS:1 COG:lin0362 KEGG:ns NR:ns ## COG: lin0362 COG1028 # Protein_GI_number: 16799439 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Listeria innocua # 3 42 214 253 254 71 82.0 3e-13 EKIPAHRFGYPEEVAACAVFLASDAASLINGANLVIDGGFTIC Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:34 2011 Seq name: gi|224461010|gb|GG657794.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_35, whole genome shotgun sequence Length of sequence - 650 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 117 105 ## COG2407 L-fucose isomerase and related proteins 2 1 Op 2 . + CDS 135 - 650 204 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein Predicted protein(s) >gi|224461010|gb|GG657794.1| GENE 1 1 - 117 105 38 aa, chain + ## HITS:1 COG:STM2976 KEGG:ns NR:ns ## COG: STM2976 COG2407 # Protein_GI_number: 16766280 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Salmonella typhimurium LT2 # 1 38 553 590 591 72 76.0 2e-13 MHNVEEEKIFRPACWNAYGMDKESQDYRACRNYGPLYK >gi|224461010|gb|GG657794.1| GENE 2 135 - 650 204 172 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 6 170 7 172 311 83 27 4e-17 MANISMENICKTYPNGVSAVENFSLEIKDKEFLIFVGPSGCGKSTTLRMIAGLEDITSGV LKLDGEVVNEVPARNRDIAMVFQSYALYPHMSVYDNIAFGLRRRKLSRDEVDQKVREAAR ILDLESQLKKKPRELSGGQKQRVAMGAAIVRNPKVFLMDEPLSNLDAKLRVQ Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:35 2011 Seq name: gi|224461009|gb|GG657795.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_36, whole genome shotgun sequence Length of sequence - 648 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 648 501 ## gi|225570280|ref|ZP_03779305.1| hypothetical protein CLOHYLEM_06376 Predicted protein(s) >gi|224461009|gb|GG657795.1| GENE 1 3 - 648 501 215 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570280|ref|ZP_03779305.1| ## NR: gi|225570280|ref|ZP_03779305.1| hypothetical protein CLOHYLEM_06376 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06376 [Clostridium hylemonae DSM 15053] # 1 215 1181 1395 2254 375 99.0 1e-102 VPNDIDTSDGKYPGYHFTGTDPKEIGETVKNGATVKVYYAANTDTAYTVQRFYETDGSYK AEPDEILPGEGTTGQLADTIEYRSTDRPGYVYDKDAPGTIESGVIQGDGSLVLKVYFKQQ FSVTYKPGTHGTFDDKTFSGLSYNADTPAFTAEGEAGYEFAGWAPDYSDKVTSSVEYVAQ WKAADNTKYTVEYYYQNEGTYPETTENKRDAYGTT Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:47 2011 Seq name: gi|224461008|gb|GG657796.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_37, whole genome shotgun sequence Length of sequence - 636 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 111 - 170 5.0 1 1 Tu 1 . + CDS 195 - 636 314 ## COG3663 G:T/U mismatch-specific DNA glycosylase Predicted protein(s) >gi|224461008|gb|GG657796.1| GENE 1 195 - 636 314 147 aa, chain + ## HITS:1 COG:Cj1254 KEGG:ns NR:ns ## COG: Cj1254 COG3663 # Protein_GI_number: 15792578 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Campylobacter jejuni # 3 145 2 140 160 139 47.0 1e-33 MQTEYIVHNFQPIYNEHSRILMLGTMPSPKSREVGFYYGHPRNRFWKVVSDVCRAPLPQT PEEKTAFALEYKIAVWDVLAGCEIKGADDSSIRNPVANDLDVILKHAKIQAVFTTGTKAG QLYKKYCLPKNGISAVTLPSTSPANCR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:48 2011 Seq name: gi|224461007|gb|GG657797.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_38, whole genome shotgun sequence Length of sequence - 636 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 9 - 491 583 ## bpr_I1818 hypothetical protein - Prom 567 - 626 6.0 Predicted protein(s) >gi|224461007|gb|GG657797.1| GENE 1 9 - 491 583 160 aa, chain - ## HITS:1 COG:no KEGG:bpr_I1818 NR:ns ## KEGG: bpr_I1818 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 9 154 10 161 167 117 41.0 1e-25 MITLTPDTKTCMSHLLLKDTFDSLSLIEGEITTYNKFSIDGHIHKDFFEDAPDRDYSYWH ELRSYCLSLIKGKRTPLGFKFVLSLGKEKFTGFLTENGLTFQPGDIQGLYMNLRYDGTRL VCVTGTSMNTFTMDKSLDEAWDRWVRTFFSDAGIAFEGDM Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:40:52 2011 Seq name: gi|224461006|gb|GG657798.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_39, whole genome shotgun sequence Length of sequence - 632 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 103 - 157 16.1 1 1 Tu 1 . - CDS 245 - 631 228 ## gi|225569298|ref|ZP_03778323.1| hypothetical protein CLOHYLEM_05380 Predicted protein(s) >gi|224461006|gb|GG657798.1| GENE 1 245 - 631 228 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569298|ref|ZP_03778323.1| ## NR: gi|225569298|ref|ZP_03778323.1| hypothetical protein CLOHYLEM_05380 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05380 [Clostridium hylemonae DSM 15053] # 1 128 574 701 701 241 100.0 2e-62 DSGAARPAIDTTGKGPACGTGLQTIRLTTLSAGAQDIYIVVKDADGNVSDRGFKIPIPAF TIPGKGTAETGTADGAPHTRNITIKSDTVPQTGDPADILPWLVIIVAVLLGCATLAAYRK CRGTKRRE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:00 2011 Seq name: gi|224461005|gb|GG657799.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_40, whole genome shotgun sequence Length of sequence - 628 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 521 642 ## gi|225569525|ref|ZP_03778550.1| hypothetical protein CLOHYLEM_05618 Predicted protein(s) >gi|224461005|gb|GG657799.1| GENE 1 3 - 521 642 172 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569525|ref|ZP_03778550.1| ## NR: gi|225569525|ref|ZP_03778550.1| hypothetical protein CLOHYLEM_05618 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05618 [Clostridium hylemonae DSM 15053] # 1 172 258 429 429 333 100.0 2e-90 TEKWAEENHDTVLRLASVCFRINQYVNDDPKEAAKIHVNYVNQLAGTEFTEEEVQALYKT SIPLYTWDMQKPWFEDKEDALYWEYEIGSTIKMYEDEGMFKSGEYGPSDIVSADKIYAEL KELKAEADSNFEKLENADGTALELKEKAEYQYSIFNYLDARNLSEQAVKEMK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:10 2011 Seq name: gi|224461004|gb|GG657800.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_41, whole genome shotgun sequence Length of sequence - 624 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 287 215 ## COG2357 Uncharacterized protein conserved in bacteria - Prom 328 - 387 9.7 2 2 Tu 1 . - CDS 408 - 602 213 ## COG2109 ATP:corrinoid adenosyltransferase Predicted protein(s) >gi|224461004|gb|GG657800.1| GENE 1 2 - 287 215 95 aa, chain - ## HITS:1 COG:lin0794 KEGG:ns NR:ns ## COG: lin0794 COG2357 # Protein_GI_number: 16799868 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 9 95 7 93 212 90 50.0 8e-19 MAATIKNYEDVDSWKTIMFLYTSALKEVGTKLEILNDEFQHVHQYNPIEHIKTRVKTPES IVKKLRRYGYETSIENMVKYVNDIAGVRLIRSFTS >gi|224461004|gb|GG657800.1| GENE 2 408 - 602 213 64 aa, chain - ## HITS:1 COG:PH0075 KEGG:ns NR:ns ## COG: PH0075 COG2109 # Protein_GI_number: 14590029 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Pyrococcus horikoshii # 1 64 112 175 175 57 42.0 4e-09 MQLGVLSEEKLIRFLEHKPRGLEIVMTGHEVSERMLELADYATEMRKVKHPYDEGKMARG GIEY Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:11 2011 Seq name: gi|224461003|gb|GG657801.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_42, whole genome shotgun sequence Length of sequence - 624 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 613 635 ## gi|225569192|ref|ZP_03778217.1| hypothetical protein CLOHYLEM_05274 Predicted protein(s) >gi|224461003|gb|GG657801.1| GENE 1 2 - 613 635 203 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569192|ref|ZP_03778217.1| ## NR: gi|225569192|ref|ZP_03778217.1| hypothetical protein CLOHYLEM_05274 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05274 [Clostridium hylemonae DSM 15053] # 1 203 27 229 229 370 100.0 1e-101 NYVAVQNMVRYLSSSSLSLFQVQIIRKDLIGMAVEGEKEGLTVREKLGVEPKEFCDDIIQ SGDNNARREHLLNAVVNTAQFAAFWFTFRFLGFYANPASYTLTWGDVLTIFLYYFIGIFL ATYIRNRLSICSSPVLRWLPYLTIFFVVICGYTLSMKFYTPINESFIIMINGWYVECAAV ALALAVTLLANMHWRRCARKYAC Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:21 2011 Seq name: gi|224461002|gb|GG657802.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_43, whole genome shotgun sequence Length of sequence - 621 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 36 - 95 9.6 1 1 Tu 1 . + CDS 316 - 450 67 ## gi|225569576|ref|ZP_03778601.1| hypothetical protein CLOHYLEM_05670 - Term 360 - 402 0.3 2 2 Tu 1 . - CDS 458 - 586 124 ## gi|225569577|ref|ZP_03778602.1| hypothetical protein CLOHYLEM_05671 Predicted protein(s) >gi|224461002|gb|GG657802.1| GENE 1 316 - 450 67 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569576|ref|ZP_03778601.1| ## NR: gi|225569576|ref|ZP_03778601.1| hypothetical protein CLOHYLEM_05670 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05670 [Clostridium hylemonae DSM 15053] # 1 44 41 84 84 83 100.0 5e-15 MQFITLLFVSGRGSYGLNSDHKQTYSVYVNEDRYEQAVKLISRL >gi|224461002|gb|GG657802.1| GENE 2 458 - 586 124 42 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569577|ref|ZP_03778602.1| ## NR: gi|225569577|ref|ZP_03778602.1| hypothetical protein CLOHYLEM_05671 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05671 [Clostridium hylemonae DSM 15053] # 1 42 281 322 322 83 100.0 6e-15 MYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYKNGDYFYCE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:31 2011 Seq name: gi|224461001|gb|GG657803.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_44, whole genome shotgun sequence Length of sequence - 614 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 614 244 ## Caci_0892 hypothetical protein Predicted protein(s) >gi|224461001|gb|GG657803.1| GENE 1 2 - 614 244 204 aa, chain + ## HITS:1 COG:no KEGG:Caci_0892 NR:ns ## KEGG: Caci_0892 # Name: not_defined # Def: hypothetical protein # Organism: C.acidiphila # Pathway: not_defined # 1 200 399 599 667 70 30.0 5e-11 ETILHRGHGWGALENMRRRAENKPLLPASFTFPQDTLGKEQEPWICLLEGRALPELNDTH FPASWMTDANYIPYLERCIKSDPHNTAAQLHLGVNLYENGRYDEAAALWEKALLAKPLPI LHRNLACAAHQEGDLKKAIRQMEQITLDTYIAADAAFLQEYLRLLAEDGQWQKLNDIYQK LPARLKEEERIYLLECEAALHLEN Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:35 2011 Seq name: gi|224461000|gb|GG657804.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_45, whole genome shotgun sequence Length of sequence - 613 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 14 - 611 602 ## CLOST_2488 drug resistance ABC-transporter, membrane protein precursor Predicted protein(s) >gi|224461000|gb|GG657804.1| GENE 1 14 - 611 602 199 aa, chain + ## HITS:1 COG:no KEGG:CLOST_2488 NR:ns ## KEGG: CLOST_2488 # Name: not_defined # Def: drug resistance ABC-transporter, membrane protein precursor # Organism: C.sticklandii # Pathway: ABC transporters [PATH:cst02010] # 7 196 1 190 243 265 80.0 6e-70 MKTFKTMLKTELKLSLRGMDMFIFAICVPLVVLIILGIIYGSRPAFPGAEYTFLEQSFGA LTTISVCAGGVMGLPLVISDYRSRNILKRYKVTPVRPSMLLFVQVAVYTLYALTSLFTLY LAAVLFFGYEFRGSVLTFAGGYLLVLVSMFSIGMMVGGIAPNTKTAGVIASLLYFPMLIF SGATLPYEVMPDALQKAAR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:40 2011 Seq name: gi|224460999|gb|GG657805.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_46, whole genome shotgun sequence Length of sequence - 612 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 311 325 ## COG2407 L-fucose isomerase and related proteins 2 1 Op 2 . - CDS 364 - 612 181 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Predicted protein(s) >gi|224460999|gb|GG657805.1| GENE 1 2 - 311 325 103 aa, chain - ## HITS:1 COG:SP2158 KEGG:ns NR:ns ## COG: SP2158 COG2407 # Protein_GI_number: 15901968 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 10 103 4 95 588 115 59.0 2e-26 MAENRYIGGYPVIGIRPVIDARKGMLDVRGSLEEQTMEMARKAAELMEARLTYSDGKPVR TVIARGTIGRVPEAAACEEQFRREGVQVTLTVTPCWCYGSETM >gi|224460999|gb|GG657805.1| GENE 2 364 - 612 181 82 aa, chain - ## HITS:1 COG:Rv1928c KEGG:ns NR:ns ## COG: Rv1928c COG1028 # Protein_GI_number: 15609065 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis H37Rv # 1 81 173 254 255 99 56.0 1e-21 VTRSLAVEWADKNVRVNSISPGYIMTDLIKGHELIPRWKELSPLERMGRPEELQGAALYL ASDASTFTTGTDIVVDGAYTCV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:40 2011 Seq name: gi|224460998|gb|GG657806.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_47, whole genome shotgun sequence Length of sequence - 610 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 146 - 187 3.5 1 1 Tu 1 . - CDS 221 - 412 61 ## Predicted protein(s) >gi|224460998|gb|GG657806.1| GENE 1 221 - 412 61 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGMEFDVYIPACARLPLAGFQSVFQQVSEDNACVGICKRQLLLQLHGGGEGDAVAAGHF GIV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:46 2011 Seq name: gi|224460997|gb|GG657807.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_48, whole genome shotgun sequence Length of sequence - 607 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 607 517 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase Predicted protein(s) >gi|224460997|gb|GG657807.1| GENE 1 1 - 607 517 202 aa, chain + ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 202 42 242 355 211 50.0 6e-55 GIISAAQIGFREADFDRNTLEANLRAMKKEYVKARRIAPEGVIGFNIMVAMRHYDAYVRA AIEAGADLIISGAGLPTELPRIAGDAEIKLAPIVSTDKSAQVILKYWDRKYARVPDLLVI EGPQAGGHLGFTKEQLEMYDSEAYDAEILKILDTVKKYEHKYGRKIPVAVAGGIETAAQA AHAFSLGADAVQVASRFVTTEE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:47 2011 Seq name: gi|224460996|gb|GG657808.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_49, whole genome shotgun sequence Length of sequence - 603 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 122 - 181 9.2 1 1 Tu 1 . + CDS 363 - 603 88 ## ELI_1364 hypothetical protein Predicted protein(s) >gi|224460996|gb|GG657808.1| GENE 1 363 - 603 88 80 aa, chain + ## HITS:1 COG:no KEGG:ELI_1364 NR:ns ## KEGG: ELI_1364 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 80 1 80 254 72 48.0 4e-12 MLRESRQKEILNLLNTNGYVEISALCRMFNVTEMTIRRDLDQLAQYNDIERTRGGAVGSE TTLYEETRFEHRINLHSEEK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:49 2011 Seq name: gi|224460995|gb|GG657809.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_50, whole genome shotgun sequence Length of sequence - 594 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 24/0.000 + CDS 1 - 384 168 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 2 1 Op 2 . + CDS 395 - 593 290 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Predicted protein(s) >gi|224460995|gb|GG657809.1| GENE 1 1 - 384 168 127 aa, chain + ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 3 126 501 620 626 139 58.0 9e-34 YDSTPLNSGTTLAELIRRPELSYEALRPIDKKRPVFPEGLEEEIIEQVNISIKYDGYIKR QEKQVEQFKKLEKRKIPENIDYDDIKSLRIEAVQKLKEYRPVSIGQASRISGVSPADISV LLVYLNA >gi|224460995|gb|GG657809.1| GENE 2 395 - 593 290 66 aa, chain + ## HITS:1 COG:SP1285 KEGG:ns NR:ns ## COG: SP1285 COG0357 # Protein_GI_number: 15901145 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Streptococcus pneumoniae TIGR4 # 9 59 10 60 237 61 52.0 4e-10 MSKILKTKLQELNISINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSL VKAIEI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:50 2011 Seq name: gi|224460994|gb|GG657810.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_51, whole genome shotgun sequence Length of sequence - 594 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 594 579 ## COG0642 Signal transduction histidine kinase Predicted protein(s) >gi|224460994|gb|GG657810.1| GENE 1 3 - 594 579 197 aa, chain - ## HITS:1 COG:BMEI1325_2 KEGG:ns NR:ns ## COG: BMEI1325_2 COG0642 # Protein_GI_number: 17987608 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Brucella melitensis # 39 196 55 220 337 79 28.0 3e-15 AKTIDNAFYMAVQVLPIMGGLAAVMLFVAWMLSKWQVSRLIRPVNELNLEHPLENEVYEE LRPLLESIDRQNKEKDAVANMRKEFSANVSHELKTPLTSISGYAEIMKNGLVKPEDIVVF SERIYNEASRLITLVEDIIKLSRLDEGKVEMEKEEVDLYELTREICSRLSPQASSRNVHI EVTGEPVVYRGIRQILD Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:51 2011 Seq name: gi|224460993|gb|GG657811.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_52, whole genome shotgun sequence Length of sequence - 593 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 130 - 591 488 ## COG3279 Response regulator of the LytR/AlgR family Predicted protein(s) >gi|224460993|gb|GG657811.1| GENE 1 130 - 591 488 153 aa, chain - ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 151 85 242 244 100 34.0 9e-22 EYAVKAFELGVDDYILKPFDRGRLKKVLERVRPSAPRETEKVNLRKIAISNDGKTIFEDI GNIVYIETHNRGCIIHAGESDYFDGKSIGEFEKRLEGERFFRCHKSYLINLDKVREVFPW GNNSLGLKMQGFEEDILSVGREKTKVLRQLLGW Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:51 2011 Seq name: gi|224460992|gb|GG657812.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_53, whole genome shotgun sequence Length of sequence - 588 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 21/0.000 + CDS 2 - 391 401 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 2 1 Op 2 . + CDS 394 - 586 194 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Predicted protein(s) >gi|224460992|gb|GG657812.1| GENE 1 2 - 391 401 129 aa, chain + ## HITS:1 COG:all1053 KEGG:ns NR:ns ## COG: all1053 COG0154 # Protein_GI_number: 17228548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Nostoc sp. PCC 7120 # 1 106 371 476 486 126 56.0 1e-29 DAYYLKALRVKALIKQAFDRAFGQYDVILGPASPATAPELGSSLGDPLKMYLGDIYTVSV NLAGLPGISVPAGHDSKGLPIGVQLIGDCFREDNIIRAAYAYECATEKKYVRTAPSGAPV TEEAAEGRG >gi|224460992|gb|GG657812.1| GENE 2 394 - 586 194 64 aa, chain + ## HITS:1 COG:CAC2976 KEGG:ns NR:ns ## COG: CAC2976 COG0064 # Protein_GI_number: 15896229 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Clostridium acetobutylicum # 5 62 3 60 478 101 72.0 3e-22 MSKQYETVIGLEVHVELATKTKIFCSCSTQFGGAPNTHTCPVCTGMPGSLPVLNKQVVEY AVAI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:52 2011 Seq name: gi|224460991|gb|GG657813.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_54, whole genome shotgun sequence Length of sequence - 588 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 293 167 ## COG3603 Uncharacterized conserved protein 2 1 Op 2 . + CDS 256 - 327 57 ## + Term 404 - 445 4.5 Predicted protein(s) >gi|224460991|gb|GG657813.1| GENE 1 3 - 293 167 96 aa, chain + ## HITS:1 COG:MA2818 KEGG:ns NR:ns ## COG: MA2818 COG3603 # Protein_GI_number: 20091642 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 4 96 38 133 135 85 42.0 2e-17 YSFISKTDEENSLVCITKDVPSNTTRRDDGWKAFRIQGMLDFSLIGILSKISGILAENKI GIFAISTFNTDYVLTKRENYERALDVLNHAGYKIEE >gi|224460991|gb|GG657813.1| GENE 2 256 - 327 57 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFSIMPDIKLKNNKSPFTGLKNK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:41:57 2011 Seq name: gi|224460990|gb|GG657814.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_55, whole genome shotgun sequence Length of sequence - 583 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 556 418 ## Rumal_0778 hypothetical protein Predicted protein(s) >gi|224460990|gb|GG657814.1| GENE 1 1 - 556 418 185 aa, chain - ## HITS:1 COG:no KEGG:Rumal_0778 NR:ns ## KEGG: Rumal_0778 # Name: not_defined # Def: hypothetical protein # Organism: R.albus # Pathway: not_defined # 2 185 222 438 680 67 29.0 2e-10 MFLGCNSLATLSVAGNINARGGVIDLTGFTAAYGYNAFAGCTSIKEVKLPADVAISDFMF IACKNLATLSVAGNINAQEGVIDLTGFTAAYGGSAFASCTSIKEVKLPADVAIGGYMFSS CESLATLSVAGNINAQGGVIDLTGFTATYSESAFGACDSIKEVKLPADVAISDFMFIACR NLATL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:00 2011 Seq name: gi|224460989|gb|GG657815.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_56, whole genome shotgun sequence Length of sequence - 586 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 138 101 ## gi|225569611|ref|ZP_03778636.1| hypothetical protein CLOHYLEM_05705 - Prom 223 - 282 10.5 + Prom 259 - 318 8.7 2 2 Tu 1 . + CDS 383 - 584 178 ## gi|225569612|ref|ZP_03778637.1| hypothetical protein CLOHYLEM_05706 Predicted protein(s) >gi|224460989|gb|GG657815.1| GENE 1 3 - 138 101 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569611|ref|ZP_03778636.1| ## NR: gi|225569611|ref|ZP_03778636.1| hypothetical protein CLOHYLEM_05705 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05705 [Clostridium hylemonae DSM 15053] # 1 45 1 45 292 84 100.0 2e-15 MGMIENGRNILATTRFLLPSLTAAEKRVAEFVLASPKEVTRMSLK >gi|224460989|gb|GG657815.1| GENE 2 383 - 584 178 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569612|ref|ZP_03778637.1| ## NR: gi|225569612|ref|ZP_03778637.1| hypothetical protein CLOHYLEM_05706 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05706 [Clostridium hylemonae DSM 15053] # 1 58 1 58 311 109 100.0 6e-23 MKKSFRATLIDTVLQSANDYDNLVVLNADSARALKLTDFTAAYPDRMYGMGISEADMVGT AAGMAAA Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:10 2011 Seq name: gi|224460988|gb|GG657816.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_57, whole genome shotgun sequence Length of sequence - 586 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 340 283 ## Closa_3659 AraC family transcriptional regulator 2 1 Op 2 . - CDS 350 - 586 208 ## gi|225569286|ref|ZP_03778311.1| hypothetical protein CLOHYLEM_05368 Predicted protein(s) >gi|224460988|gb|GG657816.1| GENE 1 1 - 340 283 113 aa, chain - ## HITS:1 COG:no KEGG:Closa_3659 NR:ns ## KEGG: Closa_3659 # Name: not_defined # Def: AraC family transcriptional regulator # Organism: C.saccharolyticum # Pathway: not_defined # 15 113 6 104 456 88 42.0 7e-17 MPDRIKKLFQSAASRNGSLSVGVIVLVTAIVIVVNLIAGQLPEKVKNIDISDNRIYEISD KSRNILKKLDKPVTFKVFAEKDKTDERIKTFIRKYTALSDQIKVEWIDPVLHP >gi|224460988|gb|GG657816.1| GENE 2 350 - 586 208 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569286|ref|ZP_03778311.1| ## NR: gi|225569286|ref|ZP_03778311.1| hypothetical protein CLOHYLEM_05368 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05368 [Clostridium hylemonae DSM 15053] # 15 78 225 288 288 107 100.0 3e-22 AAVLEAAAAAVCAVTGLAKPSLLEGFLASLLGRFSLTDALTGIAANSLLDVSSLILDVSL AGLFLFMTMQMIQKRRWS Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:19 2011 Seq name: gi|224460987|gb|GG657817.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_58, whole genome shotgun sequence Length of sequence - 585 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 372 454 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 2 1 Op 2 . + CDS 389 - 584 292 ## EUBREC_2987 hypothetical protein Predicted protein(s) >gi|224460987|gb|GG657817.1| GENE 1 1 - 372 454 123 aa, chain + ## HITS:1 COG:MJ0035 KEGG:ns NR:ns ## COG: MJ0035 COG0396 # Protein_GI_number: 15668205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Methanococcus jannaschii # 2 107 127 231 250 73 38.0 8e-14 MLSSVGLCAREYITREVDATLSGGEMKRLEIATVLARPHKLCIFDEPEAGIDLWSFSMLV QQFERIHEKKEQSLILISHQERIIQMADRIMVIENGKIGAIGTRDEILPSLLSEGQCACM DGQ >gi|224460987|gb|GG657817.1| GENE 2 389 - 584 292 65 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_2987 NR:ns ## KEGG: EUBREC_2987 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 65 3 64 308 80 66.0 2e-14 MGKQLDKTVEKVLEQIDGAGFRQKGAFNLRYNGTALCHGDSEHIKIKKKTDRQGIDIYID ENTNG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:21 2011 Seq name: gi|224460986|gb|GG657818.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_59, whole genome shotgun sequence Length of sequence - 581 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 581 674 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Predicted protein(s) >gi|224460986|gb|GG657818.1| GENE 1 2 - 581 674 193 aa, chain + ## HITS:1 COG:YPO2499 KEGG:ns NR:ns ## COG: YPO2499 COG1172 # Protein_GI_number: 16122720 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 191 45 234 330 159 51.0 4e-39 LSFISGNFLTGTNLLNVLRQISINGILAIGMTIVCLTGGIDLSVGSIVAFSGIIAAGLLR DKEYPIALIVLIAIAIGGLLGLYNGYFVAYWNAAPFVVTLSMMTIARGMTYVYSTGRPIS NLPTEFLAIGKGSIAGVPVPTIILIIVFILASVMLTKLKFGRYVYAVGGNENAAMVSGIN VKRIKMMVYVLRL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:22 2011 Seq name: gi|224460985|gb|GG657819.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_60, whole genome shotgun sequence Length of sequence - 579 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 167 75 ## gi|225569475|ref|ZP_03778500.1| hypothetical protein CLOHYLEM_05560 - Prom 287 - 346 6.6 + Prom 246 - 305 7.9 2 2 Tu 1 . + CDS 336 - 579 186 ## COG1760 L-serine deaminase Predicted protein(s) >gi|224460985|gb|GG657819.1| GENE 1 2 - 167 75 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569475|ref|ZP_03778500.1| ## NR: gi|225569475|ref|ZP_03778500.1| hypothetical protein CLOHYLEM_05560 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05560 [Clostridium hylemonae DSM 15053] # 1 55 1 55 302 89 100.0 1e-16 MYFLFPLLLLFLMALAVIFHFRKKRIICKIKCMCTEEKLELLNEITAPFGFSYEL >gi|224460985|gb|GG657819.1| GENE 2 336 - 579 186 81 aa, chain + ## HITS:1 COG:BH2497 KEGG:ns NR:ns ## COG: BH2497 COG1760 # Protein_GI_number: 15615060 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Bacillus halodurans # 3 81 5 83 220 100 60.0 6e-22 MGSIFDILGPVMVGPSSSHTAGAVRIGLISTQLFGRRPGRATIYLHGSFAATGKGHGTDR AIVAGLLGMKPDDMRIPGSFE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:27 2011 Seq name: gi|224460984|gb|GG657820.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_61, whole genome shotgun sequence Length of sequence - 578 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 198 201 ## gi|225569438|ref|ZP_03778463.1| hypothetical protein CLOHYLEM_05523 + Term 216 - 276 21.5 - Term 204 - 261 20.5 2 2 Tu 1 . - CDS 268 - 525 399 ## gi|225569439|ref|ZP_03778464.1| hypothetical protein CLOHYLEM_05524 Predicted protein(s) >gi|224460984|gb|GG657820.1| GENE 1 1 - 198 201 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569438|ref|ZP_03778463.1| ## NR: gi|225569438|ref|ZP_03778463.1| hypothetical protein CLOHYLEM_05523 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05523 [Clostridium hylemonae DSM 15053] # 1 65 101 165 165 110 100.0 3e-23 CLEGLMIFGIGGLFFIYIIAPKMDDLLTRFSSKSKIIVCVFLLAVFLGDLVHMFIAPNMG FGITS >gi|224460984|gb|GG657820.1| GENE 2 268 - 525 399 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569439|ref|ZP_03778464.1| ## NR: gi|225569439|ref|ZP_03778464.1| hypothetical protein CLOHYLEM_05524 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07861 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_07861 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05524 [Clostridium hylemonae DSM 15053] # 1 85 1 85 85 155 100.0 1e-36 MKKNTKEELLAVIASKAGCNYLSDVILPIYSEKVLAAIESIDENEYDLKEWQETVGYIIG NNTIQINDCKDAKEYLIHKLWKRGL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:39 2011 Seq name: gi|224460983|gb|GG657821.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_62, whole genome shotgun sequence Length of sequence - 578 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 577 769 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases Predicted protein(s) >gi|224460983|gb|GG657821.1| GENE 1 1 - 577 769 192 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 2 169 103 271 347 142 42.0 5e-34 RKGNYNLCKNIKMLAIPGERDGVNAEYCTHDANMRYKLPDNMTTLEGAMIEPLAVGMHAT ELSDARIGETAIVLGSGCIGLCTVMSLKARGVSEIYVADVMDKRLEKALEVGATRVFNST RESIEEFAKTLPGGGADQVYECAGNRITTLQSCRLIKRAGKVTLVGVSPEPVLELDVATL NAMEGVVYSVYR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:40 2011 Seq name: gi|224460982|gb|GG657822.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_63, whole genome shotgun sequence Length of sequence - 578 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 30/0.000 + CDS 7 - 273 276 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 2 1 Op 2 . + CDS 291 - 576 249 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Predicted protein(s) >gi|224460982|gb|GG657822.1| GENE 1 7 - 273 276 88 aa, chain + ## HITS:1 COG:BH0778 KEGG:ns NR:ns ## COG: BH0778 COG0508 # Protein_GI_number: 15613341 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Bacillus halodurans # 1 88 349 436 436 97 54.0 4e-21 MSGGTITLSNLGMYPVTQFDAIINPPEVCILAVGAVQEKPVLEDGQWSAVPVMNLTGSFD HRVVDGAYGAQFLAELKSLIEDPAMALL >gi|224460982|gb|GG657822.1| GENE 2 291 - 576 249 95 aa, chain + ## HITS:1 COG:CT557 KEGG:ns NR:ns ## COG: CT557 COG1249 # Protein_GI_number: 15605286 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Chlamydia trachomatis # 6 69 1 64 465 75 54.0 3e-14 MEDNRVKEEFDLIVVGGGPGGYSAAITAAKKGLSVILFEGGHIGGTCLNVGCIPTKYLLD KAAAMEKVRALTKQNIFKECGLFSFRKIQKGRKEV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:40 2011 Seq name: gi|224460981|gb|GG657823.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_64, whole genome shotgun sequence Length of sequence - 577 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 535 482 ## gi|225569556|ref|ZP_03778581.1| hypothetical protein CLOHYLEM_05650 Predicted protein(s) >gi|224460981|gb|GG657823.1| GENE 1 1 - 535 482 178 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569556|ref|ZP_03778581.1| ## NR: gi|225569556|ref|ZP_03778581.1| hypothetical protein CLOHYLEM_05650 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05650 [Clostridium hylemonae DSM 15053] # 1 178 138 315 344 351 99.0 1e-95 MVVWLEDMTADPDKLRRLRSLGMNLVFFDSDKGLPYADCVALDNRLAVQTLYEELVRQGY KDIAYIGWDLQEAYSIRTRRQAYKEAAGPAARLLCLPWKDAEKSEAMLGRLMTPADAQPD AVICSDRESGELTVETFRKSHAAVKIAAVDELAKSDRAEVIMYRQDLYAAVERIFTCL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:50 2011 Seq name: gi|224460980|gb|GG657824.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_65, whole genome shotgun sequence Length of sequence - 576 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 574 457 ## COG1070 Sugar (pentulose and hexulose) kinases Predicted protein(s) >gi|224460980|gb|GG657824.1| GENE 1 1 - 574 457 191 aa, chain - ## HITS:1 COG:SMc02334 KEGG:ns NR:ns ## COG: SMc02334 COG1070 # Protein_GI_number: 15966314 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Sinorhizobium meliloti # 1 191 151 341 515 138 38.0 7e-33 LYGRTYKMLLAKDYIICRLTGNFVTDHSEASGTDAFDLRNRRWSEEILSAAEIEMEKMPE LNASTDVVGQLLPEAAQALGLKKETRVVCGGGDGPCSALGAGSIEKGQMFLSFGTSAWIA GTSEEVFLDKEKTLICFGHVIPGKYMPCGTMQAAGSSYSYIRKTLCREEERRAQDEGIPV YDILNRLVTDS Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:51 2011 Seq name: gi|224460979|gb|GG657825.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_66, whole genome shotgun sequence Length of sequence - 575 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 265 306 ## DSY0982 hypothetical protein 2 1 Op 2 . + CDS 249 - 573 343 ## COG0074 Succinyl-CoA synthetase, alpha subunit Predicted protein(s) >gi|224460979|gb|GG657825.1| GENE 1 2 - 265 306 87 aa, chain + ## HITS:1 COG:no KEGG:DSY0982 NR:ns ## KEGG: DSY0982 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: Citrate cycle (TCA cycle) [PATH:dsy00020]; Propanoate metabolism [PATH:dsy00640]; C5-Branched dibasic acid metabolism [PATH:dsy00660]; Metabolic pathways [PATH:dsy01100]; Biosynthesis of secondary metabolites [PATH:dsy01110]; Microbial metabolism in diverse environments [PATH:dsy01120] # 7 77 307 377 390 73 47.0 3e-12 NKSTDYVFVNVFGGINNCADMAEGIARAYTELGIRKPVVVKSRGFNQEQGWSIYEKLGFP QTKYGTTDEAVQTLLKVKEARQNEYIN >gi|224460979|gb|GG657825.1| GENE 2 249 - 573 343 108 aa, chain + ## HITS:1 COG:APE1072 KEGG:ns NR:ns ## COG: APE1072 COG0074 # Protein_GI_number: 14601168 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Aeropyrum pernix # 1 108 6 113 297 106 47.0 1e-23 MSILIDQDTAMLIIGITGKQGRIHCKRTLESKARLLAGVAPGKGGQSVEGVPVFETVADA RAVFPEIRAAMLLVPKQFVRDAAFQALDEGIRLLAVITEFVPVMDALQ Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:53 2011 Seq name: gi|224460978|gb|GG657826.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_67, whole genome shotgun sequence Length of sequence - 573 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 114 - 173 5.2 1 1 Tu 1 . + CDS 219 - 573 280 ## Clocel_0281 methyltransferase type 11 Predicted protein(s) >gi|224460978|gb|GG657826.1| GENE 1 219 - 573 280 118 aa, chain + ## HITS:1 COG:no KEGG:Clocel_0281 NR:ns ## KEGG: Clocel_0281 # Name: not_defined # Def: methyltransferase type 11 # Organism: C.cellulovorans # Pathway: not_defined # 10 118 10 118 253 102 46.0 6e-21 MDIENSIMATKQGFEDSFSLGDYYNKQTQDEHHLKNILDFLPFSADMKILDLGTGSGYLS FPIAKKYPNISIIGLDIVEKALEVNRFKANEENVQNISFITYDGVNFPFADNEFDMVI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:57 2011 Seq name: gi|224460977|gb|GG657827.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_68, whole genome shotgun sequence Length of sequence - 573 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 571 539 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases Predicted protein(s) >gi|224460977|gb|GG657827.1| GENE 1 1 - 571 539 190 aa, chain - ## HITS:1 COG:alr3749 KEGG:ns NR:ns ## COG: alr3749 COG0402 # Protein_GI_number: 17231241 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Nostoc sp. PCC 7120 # 15 188 175 349 466 145 36.0 4e-35 YHGLLSSHPDPDEMIETYEEVIRRWDRKDGMRVVFSTSAPQRCTDEYLMRGLKTALKYDL PMHTHILETRMQRATGPEFYGASIVKHIKDIGFLTDRLTIIHGVWMDEEDMRMIGEAGAS VAHNPVSNLKLGSGIMPLRRMVQNNVNVVLGTDGMSSNDGYSMFETVKFAALLQKVMDAD YKTWLDARSI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:42:57 2011 Seq name: gi|224460976|gb|GG657828.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_69, whole genome shotgun sequence Length of sequence - 568 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 231 238 ## gi|225570361|ref|ZP_03779386.1| hypothetical protein CLOHYLEM_06458 2 1 Op 2 . - CDS 267 - 566 323 ## gi|225570360|ref|ZP_03779385.1| hypothetical protein CLOHYLEM_06457 Predicted protein(s) >gi|224460976|gb|GG657828.1| GENE 1 3 - 231 238 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570361|ref|ZP_03779386.1| ## NR: gi|225570361|ref|ZP_03779386.1| hypothetical protein CLOHYLEM_06458 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06458 [Clostridium hylemonae DSM 15053] # 1 76 1 76 300 154 100.0 3e-36 MIIDAHMHLIRKENFDKERYQWLDNWRIPENMNLDELVKMWKGMGIEKIVAMGQAMYRIW NTDMAENYIQEAYEKY >gi|224460976|gb|GG657828.1| GENE 2 267 - 566 323 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570360|ref|ZP_03779385.1| ## NR: gi|225570360|ref|ZP_03779385.1| hypothetical protein CLOHYLEM_06457 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06457 [Clostridium hylemonae DSM 15053] # 1 99 249 347 347 194 100.0 2e-48 AQAVDASGRNEVIVYGAEQPNNIKEYMKKDGLEVVGCLWDVMTLGKEAVNIVYSCLADGK EYKEGDTVEGYPESSVEGTNITFNAVLEFDKDTVDDYNF Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:11 2011 Seq name: gi|224460975|gb|GG657829.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_70, whole genome shotgun sequence Length of sequence - 568 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 21 - 539 593 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component Predicted protein(s) >gi|224460975|gb|GG657829.1| GENE 1 21 - 539 593 172 aa, chain - ## HITS:1 COG:lin2219 KEGG:ns NR:ns ## COG: lin2219 COG1136 # Protein_GI_number: 16801284 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Listeria innocua # 36 166 119 249 255 162 58.0 3e-40 MMGYVLQNPFSQISGVRETVLEEIAYGLENLGVAPEEMEERVVAIAEKTDIESLLMKNPY ELSGGQQQRVACARAVVTKPSLVLADEPTGALDSKSAGMLLESFRMMNEKKNATLLMVTH DAFTASHCKRILFIKDGRIFNELVKGSRSRKQFFDEIMQVVSYLGGGLSHAV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:11 2011 Seq name: gi|224460974|gb|GG657830.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_71, whole genome shotgun sequence Length of sequence - 566 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 81 - 560 520 ## COG0622 Predicted phosphoesterase Predicted protein(s) >gi|224460974|gb|GG657830.1| GENE 1 81 - 560 520 159 aa, chain + ## HITS:1 COG:CAC2664 KEGG:ns NR:ns ## COG: CAC2664 COG0622 # Protein_GI_number: 15895922 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Clostridium acetobutylicum # 1 142 1 141 155 90 38.0 1e-18 MKILIVSDTHKSHKNLETVLEREGHIDMLIHLGDAEGKEDYINALVNCPFHVISGNNDFF SDLPREEEFFIGGSHVFITHGHYYYVGMSEERLKAEARGRGADIVMYGHTHRPALTVEDD LVTLNPGSVVYPRQEGRKGSYIVMRMDDKGNADFEIKFV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:12 2011 Seq name: gi|224460973|gb|GG657831.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_72, whole genome shotgun sequence Length of sequence - 564 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 151 114 ## COG5426 Uncharacterized membrane protein + Term 157 - 195 8.1 2 1 Op 2 . + CDS 237 - 564 315 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Predicted protein(s) >gi|224460973|gb|GG657831.1| GENE 1 2 - 151 114 49 aa, chain + ## HITS:1 COG:AGl3482 KEGG:ns NR:ns ## COG: AGl3482 COG5426 # Protein_GI_number: 15891859 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 49 207 254 256 63 47.0 1e-10 DPFIAFGSYGKGRSAVFTADCAPHWAPPEFCEWESYDQIWQGIVGWLTD >gi|224460973|gb|GG657831.1| GENE 2 237 - 564 315 109 aa, chain + ## HITS:1 COG:BS_ylmB KEGG:ns NR:ns ## COG: BS_ylmB COG0624 # Protein_GI_number: 16078599 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus subtilis # 14 107 38 134 426 64 37.0 5e-11 MGVLKIPTVNGKDNEKALAVFLRGFLKECGVSAVVQDIDSRHANVVGVLEGKSKETVIWN GHLDTVPYGKMGEWKTDPSVPSKKNGCINARGASDMKSGLAAMAYVLGR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:13 2011 Seq name: gi|224460972|gb|GG657832.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_73, whole genome shotgun sequence Length of sequence - 562 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 560 729 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Predicted protein(s) >gi|224460972|gb|GG657832.1| GENE 1 2 - 560 729 186 aa, chain - ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 5 183 114 294 322 122 40.0 3e-28 ALAAGLFNGWLVGELNIAPMLATLGTMTLYQGIGLALSKGDAISGFPEDFLMLGQGYLAG IPLQLFLLAALVILMTVVMNKGRFGRKVYLIGSGQTGSKFAGINVKKTIILCYGAAALMA GLSGVVVTSRLATARADAGASYMFEGVAAVMLGGTDLAGGSGKVSGTIIGVLIFAILGNG LNLNKI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:13 2011 Seq name: gi|224460971|gb|GG657833.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_74, whole genome shotgun sequence Length of sequence - 559 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 558 706 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases Predicted protein(s) >gi|224460971|gb|GG657833.1| GENE 1 3 - 558 706 185 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 2 185 137 318 347 159 43.0 4e-39 CFKLPDNVSTLEGALIEPLAVGFHAAKQGEAHAGQTAVVFGAGCIGLVSMMALKACGVSR VYVVDVMEKRLEKAMELGADGVINGREEDVLEKAKELTGGEGFDLAIETAGTEITTNQAV QAVRKGSNIVLVGYGKTGMMNVMMSLALDKEVTFKTVFRYRHIYPMAIDAVAQGKVNLKG IATHI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:14 2011 Seq name: gi|224460970|gb|GG657834.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_75, whole genome shotgun sequence Length of sequence - 557 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 7 - 556 486 ## COG0554 Glycerol kinase Predicted protein(s) >gi|224460970|gb|GG657834.1| GENE 1 7 - 556 486 183 aa, chain + ## HITS:1 COG:DR1928 KEGG:ns NR:ns ## COG: DR1928 COG0554 # Protein_GI_number: 15806927 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Deinococcus radiodurans # 46 183 309 439 501 64 29.0 1e-10 MGTCEVMAVPLDGIHTDECMIKNELPCVPYLHKDSYLTYLVMTNCGSLMNWYRDFVMNEK YALSDRMADDRFSLLDEGVPDDPTGLLVIPNFGSSGNPHVDYAARGTIWGLTIHTSPGEL FGGFKEGMAYHMKLCFEALGQMGIHPELIRVSGGGAASDVTLRIRADVFGLPVCRMEHTE AGA Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:15 2011 Seq name: gi|224460969|gb|GG657835.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_76, whole genome shotgun sequence Length of sequence - 556 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 253 198 ## gi|225569317|ref|ZP_03778342.1| hypothetical protein CLOHYLEM_05399 + Prom 293 - 352 3.3 2 2 Tu 1 . + CDS 381 - 555 282 ## COG1453 Predicted oxidoreductases of the aldo/keto reductase family Predicted protein(s) >gi|224460969|gb|GG657835.1| GENE 1 2 - 253 198 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569317|ref|ZP_03778342.1| ## NR: gi|225569317|ref|ZP_03778342.1| hypothetical protein CLOHYLEM_05399 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05399 [Clostridium hylemonae DSM 15053] # 2 83 9 90 90 139 100.0 1e-31 RTEEIPETIKKKKLFEKLIEIYPRNPHYYNHLARLLVEGSSNDYNPAIELLNKAIEILEE DERTLLKTGRVALSLTDSKTSRL >gi|224460969|gb|GG657835.1| GENE 2 381 - 555 282 58 aa, chain + ## HITS:1 COG:TM1183 KEGG:ns NR:ns ## COG: TM1183 COG1453 # Protein_GI_number: 15643939 # Func_class: R General function prediction only # Function: Predicted oxidoreductases of the aldo/keto reductase family # Organism: Thermotoga maritima # 1 58 1 59 379 66 56.0 1e-11 MIYKEFHDLKLSVLGLGTMRLPLRGDGPDAPIDEERAAEMFAYAIDHGINYFDTAYGY Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:21 2011 Seq name: gi|224460968|gb|GG657836.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_77, whole genome shotgun sequence Length of sequence - 556 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 30 - 503 413 ## COG0846 NAD-dependent protein deacetylases, SIR2 family Predicted protein(s) >gi|224460968|gb|GG657836.1| GENE 1 30 - 503 413 157 aa, chain + ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 3 150 92 241 245 203 67.0 1e-52 MKLAELEAAGKLTAVVTQNIDGLHQAAGSRNVLELHGSIHRNYCRKCGKFFDASYVKHAG GVPKCECGGLIKPDVVLYEESLDSTVISRSVQAISEADTLIIGGTSLIVYPAAGFIDYFS GRHLVVINKSATAKEVGADLTIAAPIGEVLGQIEVHE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:22 2011 Seq name: gi|224460967|gb|GG657837.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_78, whole genome shotgun sequence Length of sequence - 552 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 480 407 ## COG0642 Signal transduction histidine kinase Predicted protein(s) >gi|224460967|gb|GG657837.1| GENE 1 3 - 480 407 159 aa, chain - ## HITS:1 COG:CAC0225 KEGG:ns NR:ns ## COG: CAC0225 COG0642 # Protein_GI_number: 15893517 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 51 159 80 187 339 68 33.0 3e-12 MGSPAPVTAAVVILYFAGVLLSAGYDFLRKKRYYDELSDTLEQLEEKSYLSEMIEEPEFL DGQILYHVVRTNGKYLNDMIAKQRRELEEYKSYVQTWVHEVKTPIAVERLILENHKGEAA EGLAEEIDKIEKYVEQMLYYSKSASVESDYIIRPLSLKK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:23 2011 Seq name: gi|224460966|gb|GG657838.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_79, whole genome shotgun sequence Length of sequence - 552 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 550 460 ## gi|225569163|ref|ZP_03778188.1| hypothetical protein CLOHYLEM_05244 Predicted protein(s) >gi|224460966|gb|GG657838.1| GENE 1 1 - 550 460 183 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569163|ref|ZP_03778188.1| ## NR: gi|225569163|ref|ZP_03778188.1| hypothetical protein CLOHYLEM_05244 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05244 [Clostridium hylemonae DSM 15053] # 1 183 167 349 440 360 100.0 2e-98 TFLGLSSYELEGFASVLYENRIVRKDYLRFLGADVSEDTAVVLETPAGQVEKTLRFENKN INPQDTEPFVSYHVYEEKNTAVLTLKECIYDEMYANTLREFFTEVKKKQIENIAVDVRDN GGGNSKVINEFLRYINVDNYYVYGDVDVRYGPFLITDKKEKIANERGGELVFDGTIYILT SSG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:33 2011 Seq name: gi|224460965|gb|GG657839.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_80, whole genome shotgun sequence Length of sequence - 551 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 103 102 ## + Term 126 - 161 6.1 + Prom 164 - 223 6.0 2 2 Tu 1 . + CDS 266 - 472 305 ## COG1476 Predicted transcriptional regulators Predicted protein(s) >gi|224460965|gb|GG657839.1| GENE 1 2 - 103 102 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no GIAEAYADVAPECESTAKDARDGCPVSVIDIEE >gi|224460965|gb|GG657839.1| GENE 2 266 - 472 305 68 aa, chain + ## HITS:1 COG:CAC3324 KEGG:ns NR:ns ## COG: CAC3324 COG1476 # Protein_GI_number: 15896567 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 67 1 67 69 93 82.0 9e-20 MKTRIQELRKAHKLSQEELAMAVGVTRQTIISLEREKYTASLVLAYKIARFFGVMIEDVF DFSDVEDI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:38 2011 Seq name: gi|224460964|gb|GG657840.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_81, whole genome shotgun sequence Length of sequence - 548 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 5 - 547 550 ## Ccel_1645 AraC family transcriptional regulator Predicted protein(s) >gi|224460964|gb|GG657840.1| GENE 1 5 - 547 550 180 aa, chain - ## HITS:1 COG:no KEGG:Ccel_1645 NR:ns ## KEGG: Ccel_1645 # Name: not_defined # Def: AraC family transcriptional regulator # Organism: C.cellulolyticum # Pathway: not_defined # 1 176 101 276 526 129 35.0 5e-29 KEYVMKPIKKSEFVELIHSYIADIRQAQQRNREEYLKRSENIRIMEKLKRDFLLGLLKCT SSEEARNYLIQLKELGMSFDSHLYMCVAVQYKVTPGNQEYIDFVVKNILDEFWGLRLDDE KVVNVVYSPGMVVAIFEGESQNALLEQKKKLVRDAVTLLKQYCKTDIYAGIGDVAFELEP Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:41 2011 Seq name: gi|224460963|gb|GG657841.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_82, whole genome shotgun sequence Length of sequence - 546 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 406 327 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Predicted protein(s) >gi|224460963|gb|GG657841.1| GENE 1 1 - 406 327 135 aa, chain - ## HITS:1 COG:BS_ytjP KEGG:ns NR:ns ## COG: BS_ytjP COG0624 # Protein_GI_number: 16080050 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus subtilis # 13 133 11 133 463 124 47.0 4e-29 MDHILNDLIEQYKEEIIKTTQRLIAHPSLYEEGREGAPFGEPIEAALEEVLSVAEELGFE TRNHEGYAGTVKWGQKGKQIGILTHIDVVPPGDGWTYRPFEGTLDNGRLYGRGSLDDKGP MAAALFAMKAVKESG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:42 2011 Seq name: gi|224460962|gb|GG657842.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_83, whole genome shotgun sequence Length of sequence - 546 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 285 424 ## COG1760 L-serine deaminase 2 1 Op 2 . + CDS 308 - 545 196 ## gi|225569473|ref|ZP_03778498.1| hypothetical protein CLOHYLEM_05558 Predicted protein(s) >gi|224460962|gb|GG657842.1| GENE 1 1 - 285 424 94 aa, chain + ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 1 86 136 221 227 61 34.0 3e-10 KLDGIDVSFSGESNTLIVRNIDQPGCITEVAASLSEEDIDIATMQVFRDKKGGCAVMVVE TDQVVSRDALDRLEGKEGIVNVTFLNVNGSIEEK >gi|224460962|gb|GG657842.1| GENE 2 308 - 545 196 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569473|ref|ZP_03778498.1| ## NR: gi|225569473|ref|ZP_03778498.1| hypothetical protein CLOHYLEM_05558 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05558 [Clostridium hylemonae DSM 15053] # 1 79 16 94 303 158 100.0 1e-37 MSFQSIEEVRARCEKEEISFWKAVQLEDAAERDVAPEDSWKEMKHMWQAMLDGVDAYEPG LISRSGLVGKEGGLMEEYA Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:49 2011 Seq name: gi|224460961|gb|GG657843.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_84, whole genome shotgun sequence Length of sequence - 540 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 517 742 ## TDE2258 surface antigen BspA, putative Predicted protein(s) >gi|224460961|gb|GG657843.1| GENE 1 1 - 517 742 172 aa, chain - ## HITS:1 COG:no KEGG:TDE2258 NR:ns ## KEGG: TDE2258 # Name: not_defined # Def: surface antigen BspA, putative # Organism: T.denticola # Pathway: not_defined # 20 171 117 286 355 89 42.0 8e-17 MFKSWKNLTANGLDVSGLTNLTTIGAYAFYDCGFTGGLDVSGLTNLTTIGAYAFYDCGFT GGLDVSGLTNLTTIGEDAFKNCGFTGGLDVSGLTNLTTIGEDAFKNCGFTGGLDVSGLVN LTTIGAYAFSNCGFTGGLDVSGLTNLTTVGEDAFGDCGFSSARLPAQMTVVP Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:52 2011 Seq name: gi|224460960|gb|GG657844.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_85, whole genome shotgun sequence Length of sequence - 541 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 541 421 ## Calkr_1984 xylose isomerase domain-containing protein Predicted protein(s) >gi|224460960|gb|GG657844.1| GENE 1 1 - 541 421 180 aa, chain + ## HITS:1 COG:no KEGG:Calkr_1984 NR:ns ## KEGG: Calkr_1984 # Name: not_defined # Def: xylose isomerase domain-containing protein # Organism: C.kristjanssonii # Pathway: not_defined # 2 179 55 235 303 159 46.0 7e-38 GLREEAGKMLKDSKMTTAYCAQPVILQNGLNLNSPVREERKRALLRMKECIDEACGLGAG SLSFLAGTFAEDAVEEAMEYLEESAGEMCSYAKGRLQIEIELFDYDVEKRSLIGPSERAV RLAEAVRKEHDNFWLLPDLSHIPQQHEMIEEALHNLLPYMRRTHIGNCVMEKGSPLYGDC Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:56 2011 Seq name: gi|224460959|gb|GG657845.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_86, whole genome shotgun sequence Length of sequence - 539 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 539 652 ## COG0370 Fe2+ transport system protein B Predicted protein(s) >gi|224460959|gb|GG657845.1| GENE 1 2 - 539 652 179 aa, chain - ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 11 177 166 336 709 113 33.0 2e-25 EAKQAVAPVHEFSQEVEAVLDEIETMLDGDIPEEQKRFYAVKLFERDDKIAEQMKHAPDV SAVIEKAEKDMDDDSESIITNERYNYITSIIGESLKKANKEKLTTSDKIDRVVTNRWLAL PIFAVVMWLVYYVSVSTVGTWATDWANDGVFGEGWKLFGLVDVPGIPVIVENGLSVVNC Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:43:57 2011 Seq name: gi|224460958|gb|GG657846.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_87, whole genome shotgun sequence Length of sequence - 536 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 534 491 ## gi|225570280|ref|ZP_03779305.1| hypothetical protein CLOHYLEM_06376 Predicted protein(s) >gi|224460958|gb|GG657846.1| GENE 1 3 - 534 491 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570280|ref|ZP_03779305.1| ## NR: gi|225570280|ref|ZP_03779305.1| hypothetical protein CLOHYLEM_06376 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06376 [Clostridium hylemonae DSM 15053] # 1 177 975 1151 2254 308 100.0 1e-82 TSDGKLSTDGSLNKYSKEIDSDNKEGYSAEQIKAYADEAYGITEETDRYDSYEIQVLHSK TKEWETIDDLDAYAIQDGDDIRYHVTAEAAHKLTYVAGDHSSGDAYFDAYYFKGDSAAVK SFNDTGLAADTGYKFDHWENAAGETVSGSYTMGDKDTELKAVCVKDDLSVHELKYTV Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:07 2011 Seq name: gi|224460957|gb|GG657847.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_88, whole genome shotgun sequence Length of sequence - 536 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 535 258 ## COG1160 Predicted GTPases Predicted protein(s) >gi|224460957|gb|GG657847.1| GENE 1 1 - 535 258 178 aa, chain + ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 1 178 199 376 411 223 61.0 1e-58 AAPKGRLILPQQQTIRDILEADAAAIVIKENELSNTLMTLGKKPAMVITDSQVFDKVSKE TPADIPLTSFSILFARYKGNLSTVVDGARTLECLKDGDTVLIAEGCTHHRQCDDIGTVKL PRLIQKYTGKQINFEFTSGTEFPLDLSTYNLIIHCGGCTLNEREMKYRLKCAEDAGIP Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:08 2011 Seq name: gi|224460956|gb|GG657848.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_89, whole genome shotgun sequence Length of sequence - 535 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 535 697 ## COG0747 ABC-type dipeptide transport system, periplasmic component Predicted protein(s) >gi|224460956|gb|GG657848.1| GENE 1 1 - 535 697 178 aa, chain + ## HITS:1 COG:lin0182 KEGG:ns NR:ns ## COG: lin0182 COG0747 # Protein_GI_number: 16799259 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Listeria innocua # 4 176 69 238 524 121 38.0 8e-28 MLGAVYDELYMKTDSETRYYLADSVELSDDGKTVTLKLKEDLKWHDGEPITADDVIFSLD VNADPDNGAGYANAVYIGDRPVSYKKADDLTVEITLPEPSASYVTILGTLPLLPAHVYGN DTDIKANSEANLKGIGSGPYKVKEFKNGECLELERFDDYYGDRPAIDKVVYKVIPDTS Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:08 2011 Seq name: gi|224460955|gb|GG657849.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_90, whole genome shotgun sequence Length of sequence - 533 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 10 - 532 701 ## COG2376 Dihydroxyacetone kinase Predicted protein(s) >gi|224460955|gb|GG657849.1| GENE 1 10 - 532 701 174 aa, chain + ## HITS:1 COG:YPO3350 KEGG:ns NR:ns ## COG: YPO3350 COG2376 # Protein_GI_number: 16123500 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Yersinia pestis # 1 174 157 330 333 230 61.0 9e-61 MWKIGGAKAAKGADLNEVTAAAQKAIDNTRSVGIGLTPCTLPAVGHPNFKIEEGTMEVGI GHHGEPGIEVCKLESAAKMAKRMTDIVLPDLPFARGDEVAVLVSGLGATPVMELYVLYDE IDRLLADKGIRVYKSYVGDYFTSLDMMGATLTVMRLDSELKELLDMPVECMGMT Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:09 2011 Seq name: gi|224460954|gb|GG657850.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_91, whole genome shotgun sequence Length of sequence - 532 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 530 284 ## COG1070 Sugar (pentulose and hexulose) kinases Predicted protein(s) >gi|224460954|gb|GG657850.1| GENE 1 2 - 530 284 176 aa, chain + ## HITS:1 COG:YPO1291 KEGG:ns NR:ns ## COG: YPO1291 COG1070 # Protein_GI_number: 16121574 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Yersinia pestis # 14 174 126 286 517 136 38.0 2e-32 DIVGEDAYRSVALNSLSTGFLIASLMWVKEHEPENYEKIRYIMLPKDYIRFRMCGEYGTD MSDASSGAIFDTKQRRWAWELIDSLRIDRQIFPTCHESCEVVGTVSRACAEATGLKCGIR VACGGGDTLVQAVGNGIISPGVLSANIGTACQISGGFNEPLYDEAYRTNTFCHVKK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:10 2011 Seq name: gi|224460953|gb|GG657851.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_92, whole genome shotgun sequence Length of sequence - 532 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 530 514 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Predicted protein(s) >gi|224460953|gb|GG657851.1| GENE 1 2 - 530 514 176 aa, chain + ## HITS:1 COG:CAC2723 KEGG:ns NR:ns ## COG: CAC2723 COG0624 # Protein_GI_number: 15895980 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Clostridium acetobutylicum # 1 176 146 320 465 86 32.0 3e-17 GTDEESGFMRGLKYYLKKEEAPWGGFSPDGEFPVIHAEKGTLRFYVSDTWEETKHAGGMY LKEIRGGTKVNVVPGYAYAAVDGTEDAEHMLQEARDGFAKKDNISISKQDTGWKIEAKGL GGHSSQPWNGENAIQTLLEFLHRLPLEEGGGARFAGKIEELFGDGYRGERLGIACE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:10 2011 Seq name: gi|224460952|gb|GG657852.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_93, whole genome shotgun sequence Length of sequence - 531 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 290 270 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 315 - 374 6.0 Predicted protein(s) >gi|224460952|gb|GG657852.1| GENE 1 2 - 290 270 96 aa, chain - ## HITS:1 COG:PA3128 KEGG:ns NR:ns ## COG: PA3128 COG1028 # Protein_GI_number: 15598324 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 1 89 1 89 248 73 48.0 8e-14 MSKYVLITGASRGIGKAAAVLFAARGYHVFINCRRSAGALEEVKREIISAGGSCDMVTGD VGDPEDVDKIFSFIYSRCGCLDVLINNAGCAHIGLL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:11 2011 Seq name: gi|224460951|gb|GG657853.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_94, whole genome shotgun sequence Length of sequence - 528 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 527 268 ## COG1129 ABC-type sugar transport system, ATPase component Predicted protein(s) >gi|224460951|gb|GG657853.1| GENE 1 2 - 527 268 175 aa, chain - ## HITS:1 COG:TM0956 KEGG:ns NR:ns ## COG: TM0956 COG1129 # Protein_GI_number: 15643716 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Thermotoga maritima # 3 172 82 250 523 129 42.0 4e-30 GTKSAIKQGICAVYQELSLIPDLTVAENLFLGVYETSASKRVSYQELEKKTIELFHRYEA DVIDPWAKVSTLPLPKRQMLEILKALSKDGKIIIFDEATSALSDGQAAWLMNIIRKLAEE GKIIIFTSHRLDEIKSLCTKVIVYRSGTDVADLPMEKADSDQLVTLMLGREIGGY Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:11 2011 Seq name: gi|224460950|gb|GG657854.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_95, whole genome shotgun sequence Length of sequence - 527 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 436 251 ## CLH_1625 acetyltransferase Predicted protein(s) >gi|224460950|gb|GG657854.1| GENE 1 1 - 436 251 145 aa, chain - ## HITS:1 COG:no KEGG:CLH_1625 NR:ns ## KEGG: CLH_1625 # Name: not_defined # Def: acetyltransferase # Organism: C.botulinum_E3 # Pathway: not_defined # 1 145 258 402 402 209 66.0 2e-53 MIDKVEGNTYTDEPLAFLLEDASIQEVISPYYMARIVDFPAFIAQYPFKPDITEREWRFT MTDPILECNQGSFLLRISENGHGEATRISAQCPDKINIQTMTTMLMGYKRPDYLAKIGRL QTSEAVIDMLEDAIEQQTPYISDYF Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:15 2011 Seq name: gi|224460949|gb|GG657855.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_96, whole genome shotgun sequence Length of sequence - 526 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 526 210 ## Closa_2183 hypothetical protein Predicted protein(s) >gi|224460949|gb|GG657855.1| GENE 1 1 - 526 210 175 aa, chain + ## HITS:1 COG:no KEGG:Closa_2183 NR:ns ## KEGG: Closa_2183 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 79 175 318 409 611 66 39.0 5e-10 ADGGISGSQSFYVLTTAKPEDKKNNSGQDEQRRPAQVQTSSGSGEGVPASADAGGFSNGG ASYSGGGEEGSGSTGSVPRVIVTGFDTDPAEVRAGSNFKLTVHLKNTSKATRVSNMLFDL KAPTEGADEQTTSPAFLPSSGSSSIYLDGIKAGGAADITIQLNAKADLLQKPYSI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:19 2011 Seq name: gi|224460948|gb|GG657856.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_97, whole genome shotgun sequence Length of sequence - 522 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 421 239 ## COG1414 Transcriptional regulator Predicted protein(s) >gi|224460948|gb|GG657856.1| GENE 1 1 - 421 239 140 aa, chain - ## HITS:1 COG:mlr8761 KEGG:ns NR:ns ## COG: mlr8761 COG1414 # Protein_GI_number: 13475230 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 4 103 8 107 269 57 34.0 6e-09 MTQPEESRHKASKTKSVSKTLAILSTFDETTPMQRTSDIAMKLDMNISTVSRHLNTMLDW GFLERDDSTGFYYPGLEIVALAGAALQNNDVFRHAFPELQRLSYKYGVHGHMGIPRKTEV AHLISSSSERTMELFIPMGH Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:20 2011 Seq name: gi|224460947|gb|GG657857.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_98, whole genome shotgun sequence Length of sequence - 522 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 4 - 520 420 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Predicted protein(s) >gi|224460947|gb|GG657857.1| GENE 1 4 - 520 420 172 aa, chain + ## HITS:1 COG:L0336 KEGG:ns NR:ns ## COG: L0336 COG0544 # Protein_GI_number: 15672533 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Lactococcus lactis # 1 148 166 313 427 93 36.0 1e-19 MIIDYAASADGQPIQNGSGSDYELTVGSGSFYEGFDDNLIGHNAGDTLNIEHTFADDFNN KTLAGKKASIDVTVKAVREKELPELTDEFVRTISQKSDTVEEYRKEVRKLLEENNKEYIQ SELMDSAWKQVLENTEVKKYPKDRLKEEEQSFYDHYEDGADMYEMDFPEFLS Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:21 2011 Seq name: gi|224460946|gb|GG657858.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_99, whole genome shotgun sequence Length of sequence - 521 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 520 263 ## COG0524 Sugar kinases, ribokinase family Predicted protein(s) >gi|224460946|gb|GG657858.1| GENE 1 1 - 520 263 173 aa, chain + ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 1 173 80 257 308 84 31.0 9e-17 IKTEGIYIDNSTSTGKAFITVPDGSNSCVISYPGANAFFDVEQLNKCTHLLTNTDYCLIS TELSPEVVAYAIKRCKKLNVKIFLKPATTSKIERTLLSKIDYLVPNETELEQLVPGPETI PEKAEELFKLCKNTIIVTMGAKGCYLKSSEYSHFFPAAPFSPVDTTGAANCFI Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:21 2011 Seq name: gi|224460945|gb|GG657859.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_100, whole genome shotgun sequence Length of sequence - 519 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 24 - 61 2.2 1 1 Tu 1 . - CDS 106 - 516 500 ## gi|225569758|ref|ZP_03778783.1| hypothetical protein CLOHYLEM_05852 Predicted protein(s) >gi|224460945|gb|GG657859.1| GENE 1 106 - 516 500 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569758|ref|ZP_03778783.1| ## NR: gi|225569758|ref|ZP_03778783.1| hypothetical protein CLOHYLEM_05852 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05852 [Clostridium hylemonae DSM 15053] # 1 136 615 750 750 245 100.0 9e-64 MGVSKQSAKDEEAKEFLEFALNDGQETFSQSLLALPVQKKALKKALVNNEKQEPYKISEF GFGDDPKMIAINGIGLNDKDYDELEKELNKAVHFEYGDARLRDTIMGEASNYCLEKKTLA EAVGDAAEKVALYNKE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:29 2011 Seq name: gi|224460944|gb|GG657860.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_101, whole genome shotgun sequence Length of sequence - 519 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 518 453 ## COG1070 Sugar (pentulose and hexulose) kinases Predicted protein(s) >gi|224460944|gb|GG657860.1| GENE 1 2 - 518 453 172 aa, chain - ## HITS:1 COG:TM0284 KEGG:ns NR:ns ## COG: TM0284 COG1070 # Protein_GI_number: 15643053 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 2 170 9 178 506 121 36.0 6e-28 YGTGGGKACIVDEHADVLAYSFQEYPIYVDKPSWSEHDAENYWTLACGTIRDCMKKAGIS PQEIRGIGISSAQPCLVMVDKDGRPINRAYNLMDRRAVKEVEWLREQIGVDEIFQINGNR IEDYPTMVNIMWEKNNRPDDYARIWKTLTIDGFVRLRMTGRAAMSYSHGGFW Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:30 2011 Seq name: gi|224460943|gb|GG657861.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_102, whole genome shotgun sequence Length of sequence - 518 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 516 422 ## EUBELI_20535 hypothetical protein Predicted protein(s) >gi|224460943|gb|GG657861.1| GENE 1 3 - 516 422 171 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_20535 NR:ns ## KEGG: EUBELI_20535 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 2 170 334 510 638 144 45.0 1e-33 GEIEAVYADVTAVLEKPEEGIRQLRGIRRFFAEYLGILLFPSKEERAYEEDQAERIRIYS LKGAVELKCYPSRLSPVPEVEKRQKVETIHYMRHYSVWSLIMLFFIFSFTGWVWEVSLHL VNDGAFVNRGVLHGPWLPIYGSGGVLILVVLNRLRINPAAEFAGIVVLCGC Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:34 2011 Seq name: gi|224460942|gb|GG657862.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_103, whole genome shotgun sequence Length of sequence - 517 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 307 265 ## COG0726 Predicted xylanase/chitin deacetylase 2 1 Op 2 . + CDS 300 - 516 165 ## gi|225569295|ref|ZP_03778320.1| hypothetical protein CLOHYLEM_05377 Predicted protein(s) >gi|224460942|gb|GG657862.1| GENE 1 2 - 307 265 101 aa, chain + ## HITS:1 COG:BH1917 KEGG:ns NR:ns ## COG: BH1917 COG0726 # Protein_GI_number: 15614480 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus halodurans # 5 99 175 268 276 63 30.0 8e-11 CDAVYYRPPWGHLNLFTLGWLKRLNLRLIFWDVMAQDWSEKETADTICLKIMRRVFPGAV ICLHDGRGAAGAPARTVDALRQALPMLLQEGYTFKRVDDNE >gi|224460942|gb|GG657862.1| GENE 2 300 - 516 165 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225569295|ref|ZP_03778320.1| ## NR: gi|225569295|ref|ZP_03778320.1| hypothetical protein CLOHYLEM_05377 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05377 [Clostridium hylemonae DSM 15053] # 1 72 1 72 348 94 100.0 2e-18 MNNTMTIQKTGKQILMFLLILFLLFFCLMKGKDVGQIMDIAVSASFPSIALGLLMAGTFH VSEGLNLRILLR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:40 2011 Seq name: gi|224460941|gb|GG657863.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_104, whole genome shotgun sequence Length of sequence - 517 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 70 - 498 381 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Predicted protein(s) >gi|224460941|gb|GG657863.1| GENE 1 70 - 498 381 142 aa, chain - ## HITS:1 COG:SP2033 KEGG:ns NR:ns ## COG: SP2033 COG0235 # Protein_GI_number: 15901854 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Streptococcus pneumoniae TIGR4 # 1 140 85 226 227 186 61.0 1e-47 MGGIVHTHSEWATSWAQAGRGIPCYGTTHADYMYGEIPCVRNLTREEIEEAYEKNTGLLI VEHFKGREYMAMPAVLCKNHGPFTWGKNAAEAVHNAVVLEEVAKMAARCELINPQVRPAP QELQDKHYYRKHGANAYYGQNK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:40 2011 Seq name: gi|224460940|gb|GG657864.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_105, whole genome shotgun sequence Length of sequence - 516 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 514 417 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Predicted protein(s) >gi|224460940|gb|GG657864.1| GENE 1 1 - 514 417 171 aa, chain + ## HITS:1 COG:aq_1143 KEGG:ns NR:ns ## COG: aq_1143 COG0329 # Protein_GI_number: 15606400 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Aquifex aeolicus # 1 171 56 224 294 107 36.0 1e-23 EKIAETIIQTAAGRVTVFIHCGAMNEQDTIRLLGHAEKAGADGAGIVTPAFFGATDRELE EYYVTAAQSVSDSFPIYLYNIPQCSANDISRETAEKITARCENIIGIKYSFADINRTVDY LNLKDGSFSVLHGCDRAFTSMLALGCDGTVSGIAGVFPEPFVRVYKAFCEG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:41 2011 Seq name: gi|224460939|gb|GG657865.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_106, whole genome shotgun sequence Length of sequence - 516 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 515 599 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|224460939|gb|GG657865.1| GENE 1 3 - 515 599 171 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 171 176 347 407 235 66 5e-63 DDTPIIQGSALKALEDPSGEWGDKIMELMDAVDSYIPDPQRATDQPFLMPVEDVFSITGR GTVATGRVERGVLHVSEEVEIVGIHEETRKTVVTGIEMFRKLLDEAQAGDNIGALLRGVQ RDEIERGQVLVKPGSVTCHKKFTAQVYVLTKDEGGRHTPFFNNYRPQFYFR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:42 2011 Seq name: gi|224460938|gb|GG657866.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_107, whole genome shotgun sequence Length of sequence - 516 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 514 664 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases Predicted protein(s) >gi|224460938|gb|GG657866.1| GENE 1 1 - 514 664 171 aa, chain - ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 165 103 268 347 146 46.0 2e-35 KGLYNLCPDMSFMAIPNERDGVFSEYCVHPANMCFKLPDNVDTMEGALIEPLAVGFHAAK VAEAEIGQSAVVLGCGCIGLVTIMVLKARGIEEIYAVDMIGKRLEKAKEVGAKEAFNAKD VNIEEFVRTLPGGGVDLVFETAGAEFTTRQSAKLIKNGGRVVLVGMCAEPE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:42 2011 Seq name: gi|224460937|gb|GG657867.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_108, whole genome shotgun sequence Length of sequence - 514 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 512 642 ## COG1129 ABC-type sugar transport system, ATPase component Predicted protein(s) >gi|224460937|gb|GG657867.1| GENE 1 2 - 512 642 170 aa, chain - ## HITS:1 COG:SMb20713 KEGG:ns NR:ns ## COG: SMb20713 COG1129 # Protein_GI_number: 16265168 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 1 170 95 264 506 165 47.0 5e-41 MIAQELNYVPEMSIEENLFLGRLPVNKIGKIDWRKVRKETLRFLEQEKLPYDPEQKLKTL TVSDIQMLEIIKAISNNADIVIMDEPTSAITNREVEVLFEKIAELKSRGVSIIYISHKME EVFRIADDITVLRDGTVVETHPASELDLDTVIALMVGRKMENVYPKEEVP Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:43 2011 Seq name: gi|224460936|gb|GG657868.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_109, whole genome shotgun sequence Length of sequence - 514 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 232 236 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit - Prom 363 - 422 5.3 Predicted protein(s) >gi|224460936|gb|GG657868.1| GENE 1 1 - 232 236 77 aa, chain - ## HITS:1 COG:CAC3143 KEGG:ns NR:ns ## COG: CAC3143 COG0085 # Protein_GI_number: 15896392 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Clostridium acetobutylicum # 6 77 2 73 1241 95 59.0 3e-20 MEKNRIRPIKSGKSSRMSYSRQKEVLQMPNLIEVQKDSYQWFLDEGLKEVFDDISPIADY SGHLSLEFVDFTLCEDD Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:43 2011 Seq name: gi|224460935|gb|GG657869.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_110, whole genome shotgun sequence Length of sequence - 514 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 512 389 ## gi|225569504|ref|ZP_03778529.1| hypothetical protein CLOHYLEM_05590 Predicted protein(s) >gi|224460935|gb|GG657869.1| GENE 1 2 - 512 389 170 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225569504|ref|ZP_03778529.1| ## NR: gi|225569504|ref|ZP_03778529.1| hypothetical protein CLOHYLEM_05590 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_05590 [Clostridium hylemonae DSM 15053] # 1 170 936 1105 1141 322 100.0 6e-87 VFDVLVKIADRIYQYDIDGKAFTGEVILHLDKNELSSQGTMPQAELGLQNKGTVDLSYVN CQLSGQDADKMQILEKAKRSKMMNIAAGDQKNTVVGLKEGMKAGTYKAEMAVSIGDLNLY KIPVTLTKQDKKPGTTDPSGGTDGQPDTNVDHQTDKQSGLGSAGNPTGGN Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:53 2011 Seq name: gi|224460934|gb|GG657870.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_111, whole genome shotgun sequence Length of sequence - 513 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 205 - 507 373 ## COG1453 Predicted oxidoreductases of the aldo/keto reductase family Predicted protein(s) >gi|224460934|gb|GG657870.1| GENE 1 205 - 507 373 100 aa, chain - ## HITS:1 COG:CAC0767 KEGG:ns NR:ns ## COG: CAC0767 COG1453 # Protein_GI_number: 15894054 # Func_class: R General function prediction only # Function: Predicted oxidoreductases of the aldo/keto reductase family # Organism: Clostridium acetobutylicum # 15 89 288 366 376 73 44.0 8e-14 MKALMEVTDSMLDILPCTACRYCVAHCPKGLDIPTLLSLYNETRFVNGLITHMAVDAIPE EKRPSACIGCKSCEAVCPQQLEIAGAMSDFVRRLDAPAGL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:54 2011 Seq name: gi|224460933|gb|GG657871.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_112, whole genome shotgun sequence Length of sequence - 513 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 512 480 ## COG1481 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|224460933|gb|GG657871.1| GENE 1 2 - 512 480 170 aa, chain - ## HITS:1 COG:CAC0513 KEGG:ns NR:ns ## COG: CAC0513 COG1481 # Protein_GI_number: 15893804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 165 57 243 317 144 42.0 5e-35 RKCFTLIEKTFNIRTDIAVRRNTGRDSSSYFIHARGKELLAVKNASAQAVCCKRSYIRGA FLAAGSMSDPSKSYHFEIVCGDEAKAVHLRDIINSFGMDAKIVPRKKTFVVYLKEGSQIV DILNVMEAHIALMELENVRILKEMRNSVNRKVNCETANINKTVSAVGTEG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:55 2011 Seq name: gi|224460932|gb|GG657872.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_113, whole genome shotgun sequence Length of sequence - 512 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 489 641 ## COG0747 ABC-type dipeptide transport system, periplasmic component Predicted protein(s) >gi|224460932|gb|GG657872.1| GENE 1 1 - 489 641 162 aa, chain + ## HITS:1 COG:lin0182 KEGG:ns NR:ns ## COG: lin0182 COG0747 # Protein_GI_number: 16799259 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Listeria innocua # 5 159 362 520 524 74 32.0 8e-14 GLDGKTLKLVYNQDRAFMKETALIVQQQLKDVGIRLEVEGMESNGFFDRVFGDASDYDLY FNGYGAFGDPDEVISGMFDGTWGINLEVSEDQLDLWKQGRSAADDKERAGIYKELQEKAV EDMSIYPIAYPNYVFATSSSLEGADELQTNPVFEDYTKLSFK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:55 2011 Seq name: gi|224460931|gb|GG657873.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_114, whole genome shotgun sequence Length of sequence - 512 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 97 - 450 234 ## COG0594 RNase P protein component Predicted protein(s) >gi|224460931|gb|GG657873.1| GENE 1 97 - 450 234 117 aa, chain + ## HITS:1 COG:CAC3738 KEGG:ns NR:ns ## COG: CAC3738 COG0594 # Protein_GI_number: 15896969 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Clostridium acetobutylicum # 7 103 6 104 119 79 48.0 1e-15 MKFSESLKKNKDFQTVYNKGISCANKYLVMYVMENHTERNRLGISVSKKVGNSVVRHRLT RLIRESYRLQEDRFRCGLDIIVIARIGAKGKNYKEIVSALLHLGHLHEIIDEGNDSR Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:56 2011 Seq name: gi|224460930|gb|GG657874.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_115, whole genome shotgun sequence Length of sequence - 509 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 507 511 ## COG3103 SH3 domain protein Predicted protein(s) >gi|224460930|gb|GG657874.1| GENE 1 3 - 507 511 168 aa, chain - ## HITS:1 COG:lin2100_2 KEGG:ns NR:ns ## COG: lin2100_2 COG3103 # Protein_GI_number: 16801166 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Listeria innocua # 40 162 143 261 612 61 36.0 7e-10 KRKKICTVTLAVLSGVVILSLGTFITSFAKEDSSGSQVTTMAATANLNLRDDAGLHGKVI TVMPKGASVEVYSMTSAGWYNVKYKDQTGYAYYVYLNFEGTDKGTVNDGKVTHMYATAPL NVRSKPNTGSAILGSFKKGDAVTVVSKHDGWFKVDFNGKQGYCHGGYL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:56 2011 Seq name: gi|224460929|gb|GG657875.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_116, whole genome shotgun sequence Length of sequence - 508 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 507 517 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 Predicted protein(s) >gi|224460929|gb|GG657875.1| GENE 1 1 - 507 517 169 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 6 167 157 316 329 203 61 1e-53 AGHMDRYVHEFSGGQRQRIGIARALAVEPELLVCDEPISALDVSIQAQIVNLLIKLQKER GLTYMFIAHDLSMVKYISDRTAVMYLGKIVETAGADVLCRNPKHPYTQALLSAVPIPDPE AEAGKKRIPLEGELPSPIGPGSGCPFFGRCPRAMELCRYEEPKLREVEK Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:57 2011 Seq name: gi|224460928|gb|GG657876.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_117, whole genome shotgun sequence Length of sequence - 508 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 66 - 507 331 ## COG4739 Uncharacterized protein containing a ferredoxin domain Predicted protein(s) >gi|224460928|gb|GG657876.1| GENE 1 66 - 507 331 147 aa, chain + ## HITS:1 COG:AF2201 KEGG:ns NR:ns ## COG: AF2201 COG4739 # Protein_GI_number: 11499783 # Func_class: S Function unknown # Function: Uncharacterized protein containing a ferredoxin domain # Organism: Archaeoglobus fulgidus # 1 147 1 150 184 99 45.0 2e-21 MLLQSGTLEERGVLDTAAKMCVAARTAPKAKGVDEILTLVLTGDEKNLLADKMEELGVRY FKDKAFVWYGRDAENVRKSQAVVLIGARKSYRGVGQCALCGFKNCEECKKAGGNCAHLFL DLGIALSSAVLKASGDNVDNRMMWSAG Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:44:58 2011 Seq name: gi|224460927|gb|GG657877.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_118, whole genome shotgun sequence Length of sequence - 505 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 64 - 504 311 ## RoseRS_2460 NAD/NADP octopine/nopaline dehydrogenase Predicted protein(s) >gi|224460927|gb|GG657877.1| GENE 1 64 - 504 311 146 aa, chain - ## HITS:1 COG:no KEGG:RoseRS_2460 NR:ns ## KEGG: RoseRS_2460 # Name: not_defined # Def: NAD/NADP octopine/nopaline dehydrogenase # Organism: Roseiflexus_RS-1 # Pathway: not_defined # 1 142 218 358 368 103 39.0 2e-21 ATGGDFYFYENGIQPSVGRLIRSIDTERLSIAKAMGFDLYPGPVLTKKQGYLIEDDYENC YRSAPGFKGVKAPQKLDTRYFHEDVGFGLVLFEELGRKFGVEVSNISSVITIASTIMQRD YRAERARTLDKLGLGDLSCQELLNCL Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:45:01 2011 Seq name: gi|224460926|gb|GG657878.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_119, whole genome shotgun sequence Length of sequence - 505 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 27 - 504 120 ## Acfer_0575 heteropolysaccharide repeat-containing protein Predicted protein(s) >gi|224460926|gb|GG657878.1| GENE 1 27 - 504 120 159 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0575 NR:ns ## KEGG: Acfer_0575 # Name: not_defined # Def: heteropolysaccharide repeat-containing protein # Organism: A.fermentans # Pathway: not_defined # 3 157 300 455 467 96 37.0 3e-19 MGLFGCMIFYYPMTKLLIWWLPQYEASMGYAAFLLPICVYECKSSILVSTYLKTLREEKI LFRINLVSVVLAAILSIVTIYIMDSLIGAMLSILIVLAYRCCAGEIKISKIMKKNCAKSM ITETVMVVTFVLSGSLMAWSGVVLFTVMYILFLFIFRGE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:45:05 2011 Seq name: gi|224460925|gb|GG657879.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_120, whole genome shotgun sequence Length of sequence - 503 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 490 466 ## gi|225570280|ref|ZP_03779305.1| hypothetical protein CLOHYLEM_06376 Predicted protein(s) >gi|224460925|gb|GG657879.1| GENE 1 1 - 490 466 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225570280|ref|ZP_03779305.1| ## NR: gi|225570280|ref|ZP_03779305.1| hypothetical protein CLOHYLEM_06376 [Clostridium hylemonae DSM 15053] hypothetical protein CLOHYLEM_06376 [Clostridium hylemonae DSM 15053] # 1 163 16 178 2254 239 99.0 4e-62 MVGSNAIYSMSSALKANEIDAAQEASAQADSEPEPQVPESNNEGVDVSVVNDGKSGQTQE PQQSEPQQQTGQGTEQGASVTEPQTGEPQQPQDTEQEETKYDVVIHKPEADGGVVKVWTA GDKRTVTYDGNNVFKEEVAEGTTYNIEITANDGYEVEKVADKN Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:45:14 2011 Seq name: gi|224460924|gb|GG657880.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_121, whole genome shotgun sequence Length of sequence - 502 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 40 - 459 433 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase Predicted protein(s) >gi|224460924|gb|GG657880.1| GENE 1 40 - 459 433 139 aa, chain - ## HITS:1 COG:Cgl2530 KEGG:ns NR:ns ## COG: Cgl2530 COG0034 # Protein_GI_number: 19553780 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Corynebacterium glutamicum # 1 138 376 491 515 75 34.0 2e-14 MQALIENKKLLLIDDSIVRGTQLRETTEFLYHSGAKEVHVRPACPPLLYGCKYLNFSRSK SEMELITRRVIKEKEGEDCPQEVLDEYADPCSCKYVEMVEAIRRQQNFTTLRYHRLDDLT ASIGIEPCRLCTYCFDGKE Prediction of potential genes in microbial genomes Time: Fri Jul 1 07:45:15 2011 Seq name: gi|224460923|gb|GG657881.1| Clostridium hylemonae DSM 15053 genomic scaffold Scfld_02_122, whole genome shotgun sequence Length of sequence - 501 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 173 165 ## ELI_0302 hypothetical protein + Term 320 - 361 2.4 Predicted protein(s) >gi|224460923|gb|GG657881.1| GENE 1 3 - 173 165 56 aa, chain + ## HITS:1 COG:no KEGG:ELI_0302 NR:ns ## KEGG: ELI_0302 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 2 50 43 91 93 62 67.0 5e-09 GTATREELRIRNSRIYSDYLAGENMDNLSAKYFLSLKSIQRIIGQEKKKNEKGLNR